BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001440
(1077 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 238/772 (30%), Positives = 348/772 (45%), Gaps = 95/772 (12%)
Query: 36 EEAHALLKWKTSLQNHNNKGSFLPSWTLNNATKISPCAWFGIHCNHAGKVNSINLTSAGL 95
E H L+ +K L + N LP W+ N +PC + G+ C KV SI+L+S L
Sbjct: 12 REIHQLISFKDVLPDKN----LLPDWSSNK----NPCTFDGVTC-RDDKVTSIDLSSKPL 62
Query: 96 IGTLHDFSFSSFPHLAYLD-------LRVNQIFGIIPSQIANNSKLKYLDLSSNSFSG-- 146
+ FS+ L + I G + S ++ L LDLS NS SG
Sbjct: 63 -----NVGFSAVSSSLLSLTGLESLFLSNSHINGSV-SGFKCSASLTSLDLSRNSLSGPV 116
Query: 147 TIPPQIGNLSMLKILYLSTN--QFSGRIPPQIGHLSYLKALHLFENGLSGS------IPP 198
T +G+ S LK L +S+N F G++ + L+ L+ L L N +SG+ +
Sbjct: 117 TTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KLNSLEVLDLSANSISGANVVGWVLSD 175
Query: 199 SLGNLTNLAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLD 258
G L +LAI N +SG + ++ +L L++ N S +P LG+ L LD
Sbjct: 176 GCGELKHLAI---SGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLD 229
Query: 259 LHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPS 318
+ N LSG + T L +LN+ N G IP LKSL L L+ NK +G IP
Sbjct: 230 ISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPD 287
Query: 319 SL-GNLTKLTILYLSDNLLFGSIPCEIG-------------------------NLRYLFY 352
L G LT L LS N +G++P G +R L
Sbjct: 288 FLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKV 347
Query: 353 LELGDNKLSGSIPHSLGNLT-NLATLYLFTNLLSGSIPSEIXXXXXXXXXXXXXXXX--X 409
L+L N+ SG +P SL NL+ +L TL L +N SG I +
Sbjct: 348 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 407
Query: 410 XXIPYSFGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQGPIP-DLRNLTR 468
IP + N + ++ L + N LSG IP G+L KL L L N L+G IP +L +
Sbjct: 408 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKT 467
Query: 469 LARVRLDRNHLTGNISESFGIHSNLSYINLSHKKFYGEISFDWGKFPNLGTLDVSANNIT 528
L + LD N LTG I +NL++I+LS+ + GEI G+ NL L +S N+ +
Sbjct: 468 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 527
Query: 529 GILPPEIGDSPQLKVLDLSSNHIVGEIPSELGKLRSLI--------KLTLNRNQFSGQLP 580
G +P E+GD L LDL++N G IP+ + K I + +N +
Sbjct: 528 GNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKEC 587
Query: 581 TELGSLIQLEHLDLSS-NRLSNSIPGSLGNLV-------------KLYYLNLSNNQFSGE 626
G+L++ + + NRLS P ++ + V + +L++S N SG
Sbjct: 588 HGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGY 647
Query: 627 IPIKLEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCFKEMHGLV 686
IP ++ +L L+L HN + IP +V ++ L L+L+ N L G IP+ + L
Sbjct: 648 IPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 707
Query: 687 YIDISYNKLHGPIPNSAAFKHAPMEALQGNKGLCGDIKGFPSCKASKSDKQA 738
ID+S N L GPIP F+ P N GLCG P C S +D A
Sbjct: 708 EIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG--YPLPRCDPSNADGYA 757
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 238/775 (30%), Positives = 349/775 (45%), Gaps = 95/775 (12%)
Query: 36 EEAHALLKWKTSLQNHNNKGSFLPSWTLNNATKISPCAWFGIHCNHAGKVNSINLTSAGL 95
E H L+ +K L + N LP W+ N +PC + G+ C KV SI+L+S L
Sbjct: 9 REIHQLISFKDVLPDKN----LLPDWSSNK----NPCTFDGVTC-RDDKVTSIDLSSKPL 59
Query: 96 IGTLHDFSFSSFPHLAYLD-------LRVNQIFGIIPSQIANNSKLKYLDLSSNSFSG-- 146
+ FS+ L + I G + S ++ L LDLS NS SG
Sbjct: 60 -----NVGFSAVSSSLLSLTGLESLFLSNSHINGSV-SGFKCSASLTSLDLSRNSLSGPV 113
Query: 147 TIPPQIGNLSMLKILYLSTN--QFSGRIPPQIGHLSYLKALHLFENGLSGS------IPP 198
T +G+ S LK L +S+N F G++ + L+ L+ L L N +SG+ +
Sbjct: 114 TTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KLNSLEVLDLSANSISGANVVGWVLSD 172
Query: 199 SLGNLTNLAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLD 258
G L +LAI N +SG + ++ +L L++ N S +P LG+ L LD
Sbjct: 173 GCGELKHLAI---SGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLD 226
Query: 259 LHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPS 318
+ N LSG + T L +LN+ N G IP LKSL L L+ NK +G IP
Sbjct: 227 ISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPD 284
Query: 319 SL-GNLTKLTILYLSDNLLFGSIPCEIG-------------------------NLRYLFY 352
L G LT L LS N +G++P G +R L
Sbjct: 285 FLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKV 344
Query: 353 LELGDNKLSGSIPHSLGNLT-NLATLYLFTNLLSGSIPSEIXXXXXXXXXXXXXXXX--X 409
L+L N+ SG +P SL NL+ +L TL L +N SG I +
Sbjct: 345 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 404
Query: 410 XXIPYSFGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQGPIP-DLRNLTR 468
IP + N + ++ L + N LSG IP G+L KL L L N L+G IP +L +
Sbjct: 405 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKT 464
Query: 469 LARVRLDRNHLTGNISESFGIHSNLSYINLSHKKFYGEISFDWGKFPNLGTLDVSANNIT 528
L + LD N LTG I +NL++I+LS+ + GEI G+ NL L +S N+ +
Sbjct: 465 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 524
Query: 529 GILPPEIGDSPQLKVLDLSSNHIVGEIPSELGKLRSLI--------KLTLNRNQFSGQLP 580
G +P E+GD L LDL++N G IP+ + K I + +N +
Sbjct: 525 GNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKEC 584
Query: 581 TELGSLIQLEHLDLSS-NRLSNSIPGSLGNLV-------------KLYYLNLSNNQFSGE 626
G+L++ + + NRLS P ++ + V + +L++S N SG
Sbjct: 585 HGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGY 644
Query: 627 IPIKLEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCFKEMHGLV 686
IP ++ +L L+L HN + IP +V ++ L L+L+ N L G IP+ + L
Sbjct: 645 IPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 704
Query: 687 YIDISYNKLHGPIPNSAAFKHAPMEALQGNKGLCGDIKGFPSCKASKSDKQASRK 741
ID+S N L GPIP F+ P N GLCG P C S +D A +
Sbjct: 705 EIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG--YPLPRCDPSNADGYAHHQ 757
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 161 bits (408), Expect = 1e-39, Method: Composition-based stats.
Identities = 94/295 (31%), Positives = 158/295 (53%), Gaps = 17/295 (5%)
Query: 794 RKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFL 853
++ + E+ A+++F ++ +G GG G VY+ L+ G +VAVK+ + +F
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEE--RXQGGELQFQ 83
Query: 854 NEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMIL-SNATSAEELGWTQRMN 912
EV+ ++ HRN+++ GFC +VY Y+ GS+A L S L W +R
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 913 VIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLK-PDSSNWTEL 971
+ G A L+YLH+ C P I++RD+ + N+LLD E+EA V DFG++K + D +
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 203
Query: 972 AGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNL------- 1024
GTIG++APE T K +EK+DV+ +GV+ LE I G+ D L
Sbjct: 204 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 263
Query: 1025 --DRTLDEILDPRLPAPSCNIRDKLI-SIMEVAISCLDENPDSRPTMQKVSQLLK 1076
++ L+ ++D L N +D+ + +++VA+ C +P RP M +V ++L+
Sbjct: 264 LKEKKLEALVDVDLQG---NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant
Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 159 bits (402), Expect = 7e-39, Method: Composition-based stats.
Identities = 96/297 (32%), Positives = 160/297 (53%), Gaps = 21/297 (7%)
Query: 794 RKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMT--CQQE 851
++ + E+ A+++F ++ +G GG G VY+ L+ G +VAVK+ L E T + +
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKR----LKEERTQGGELQ 73
Query: 852 FLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMIL-SNATSAEELGWTQR 910
F EV+ ++ HRN+++ GFC +VY Y+ GS+A L S L W +R
Sbjct: 74 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR 133
Query: 911 MNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLK-PDSSNWT 969
+ G A L+YLH+ C P I++RD+ + N+LLD E+EA V DFG++K + D
Sbjct: 134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX 193
Query: 970 ELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNL----- 1024
+ G IG++APE T K +EK+DV+ +GV+ LE I G+ D L
Sbjct: 194 AVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253
Query: 1025 ----DRTLDEILDPRLPAPSCNIRDKLI-SIMEVAISCLDENPDSRPTMQKVSQLLK 1076
++ L+ ++D L N +D+ + +++VA+ C +P RP M +V ++L+
Sbjct: 254 GLLKEKKLEALVDVDLQG---NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 152/296 (51%), Gaps = 25/296 (8%)
Query: 797 AYEEIVRATNDFDEE------HCIGTGGQGSVYRAELSSGEIVAVKKFHSPL-LSEMTCQ 849
++ E+ TN+FDE + +G GG G VY+ +++ VAVKK + + ++ +
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELK 74
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQ 909
Q+F E+K + + +H N+V+ GF S +VY Y+ GSL LS L W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 910 RMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN-- 967
R + +G A+ +++LH + ++RDI S N+LLD + A +SDFG++++ + +
Sbjct: 135 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 968 WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKG-------KHPRDFISSICST 1020
+ + GT Y+APE A ++T KSD+YSFGV+ LE I G + P+ +
Sbjct: 192 XSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 250
Query: 1021 SSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
D I A S ++ ++ VA CL E + RP ++KV QLL+
Sbjct: 251 EDEEKTIEDYIDKKMNDADSTSVE----AMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 151/296 (51%), Gaps = 25/296 (8%)
Query: 797 AYEEIVRATNDFDEE------HCIGTGGQGSVYRAELSSGEIVAVKKFHSPL-LSEMTCQ 849
++ E+ TN+FDE + +G GG G VY+ +++ VAVKK + + ++ +
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELK 74
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQ 909
Q+F E+K + + +H N+V+ GF S +VY Y+ GSL LS L W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 910 RMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN-- 967
R + +G A+ +++LH + ++RDI S N+LLD + A +SDFG++++ + +
Sbjct: 135 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 968 WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKG-------KHPRDFISSICST 1020
+ GT Y+APE A ++T KSD+YSFGV+ LE I G + P+ +
Sbjct: 192 XXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 250
Query: 1021 SSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
D I A S ++ ++ VA CL E + RP ++KV QLL+
Sbjct: 251 EDEEKTIEDYIDKKMNDADSTSVE----AMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 151/296 (51%), Gaps = 25/296 (8%)
Query: 797 AYEEIVRATNDFDEE------HCIGTGGQGSVYRAELSSGEIVAVKKFHSPL-LSEMTCQ 849
++ E+ TN+FDE + +G GG G VY+ +++ VAVKK + + ++ +
Sbjct: 10 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELK 68
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQ 909
Q+F E+K + + +H N+V+ GF S +VY Y+ GSL LS L W
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 910 RMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN-- 967
R + +G A+ +++LH + ++RDI S N+LLD + A +SDFG++++ + +
Sbjct: 129 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVM 185
Query: 968 WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKG-------KHPRDFISSICST 1020
+ GT Y+APE A ++T KSD+YSFGV+ LE I G + P+ +
Sbjct: 186 XXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 244
Query: 1021 SSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
D I A S ++ ++ VA CL E + RP ++KV QLL+
Sbjct: 245 EDEEKTIEDYIDKKMNDADSTSVE----AMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 154/288 (53%), Gaps = 20/288 (6%)
Query: 795 KIAYEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLN 854
++ ++ ATN+FD + IG G G VY+ L G VA+K+ +P S+ +
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEF--ET 84
Query: 855 EVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNAT-SAEELGWTQRMNV 913
E+++L+ RH ++V GFC ++Y+Y+E G+L L + + W QR+ +
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 914 IKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKS-LKPDSSNWTELA 972
G A L YLH I++RD+ S N+LLD + ++DFGISK + D ++ +
Sbjct: 145 CIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVV 201
Query: 973 -GTIGYVAPELAYTMKVTEKSDVYSFGVLALE------AIKGKHPRDFIS-SICSTSSNL 1024
GT+GY+ PE ++TEKSDVYSFGV+ E AI PR+ ++ + + S+
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN 261
Query: 1025 DRTLDEILDPRLPAPSCNIR-DKLISIMEVAISCLDENPDSRPTMQKV 1071
+ L++I+DP L + IR + L + A+ CL + + RP+M V
Sbjct: 262 NGQLEQIVDPNL---ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 129 bits (325), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 152/290 (52%), Gaps = 24/290 (8%)
Query: 795 KIAYEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLN 854
++ ++ ATN+FD + IG G G VY+ L G VA+K+ +P S+ +
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEF--ET 84
Query: 855 EVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNAT-SAEELGWTQRMNV 913
E+++L+ RH ++V GFC ++Y+Y+E G+L L + + W QR+ +
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 914 IKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTEL-- 971
G A L YLH I++RD+ S N+LLD + ++DFGISK K T L
Sbjct: 145 CIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHLXX 199
Query: 972 --AGTIGYVAPELAYTMKVTEKSDVYSFGVLALE------AIKGKHPRDFIS-SICSTSS 1022
GT+GY+ PE ++TEKSDVYSFGV+ E AI PR+ ++ + + S
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES 259
Query: 1023 NLDRTLDEILDPRLPAPSCNIR-DKLISIMEVAISCLDENPDSRPTMQKV 1071
+ + L++I+DP L + IR + L + A+ CL + + RP+M V
Sbjct: 260 HNNGQLEQIVDPNL---ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 126 bits (316), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 146/296 (49%), Gaps = 25/296 (8%)
Query: 797 AYEEIVRATNDFDEE------HCIGTGGQGSVYRAELSSGEIVAVKKFHSPL-LSEMTCQ 849
++ E+ TN+FDE + G GG G VY+ +++ VAVKK + + ++ +
Sbjct: 7 SFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELK 65
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQ 909
Q+F E+K + +H N+V+ GF S +VY Y GSL LS L W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 910 RMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLK--PDSSN 967
R + +G A+ +++LH + ++RDI S N+LLD + A +SDFG++++ +
Sbjct: 126 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVX 182
Query: 968 WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKG-------KHPRDFISSICST 1020
+ + GT Y APE A ++T KSD+YSFGV+ LE I G + P+ +
Sbjct: 183 XSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 241
Query: 1021 SSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
D I A S ++ + VA CL E + RP ++KV QLL+
Sbjct: 242 EDEEKTIEDYIDKKXNDADSTSVE----AXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 121 bits (304), Expect = 2e-27, Method: Composition-based stats.
Identities = 92/275 (33%), Positives = 138/275 (50%), Gaps = 23/275 (8%)
Query: 807 DFDEEHCIGTGGQGSVYRAELSSGEIVAVK-----KFHSPLLSEMTCQQEFLNEVKSLTE 861
D + + IG G G+V+RAE G VAVK FH+ ++E FL EV +
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNE------FLREVAIMKR 90
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+RH NIV F G + + IV EYL GSL +L + + E+L +R+++ VA +
Sbjct: 91 LRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGM 150
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPE 981
+YLHN PPIV+RD+ S N+L+D +Y V DFG+S+ AGT ++APE
Sbjct: 151 NYLHNRN-PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPE 209
Query: 982 LAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSC 1041
+ EKSDVYSFGV+ E + P ++ ++ + RL P
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC------KRLEIPR- 262
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
N+ ++ +I+E C P RP+ + LL+
Sbjct: 263 NLNPQVAAIIE---GCWTNEPWKRPSFATIMDLLR 294
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 120 bits (300), Expect = 5e-27, Method: Composition-based stats.
Identities = 91/275 (33%), Positives = 139/275 (50%), Gaps = 23/275 (8%)
Query: 807 DFDEEHCIGTGGQGSVYRAELSSGEIVAVK-----KFHSPLLSEMTCQQEFLNEVKSLTE 861
D + + IG G G+V+RAE G VAVK FH+ ++E FL EV +
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNE------FLREVAIMKR 90
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+RH NIV F G + + IV EYL GSL +L + + E+L +R+++ VA +
Sbjct: 91 LRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGM 150
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPE 981
+YLHN PPIV+R++ S N+L+D +Y V DFG+S+ + AGT ++APE
Sbjct: 151 NYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPE 209
Query: 982 LAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSC 1041
+ EKSDVYSFGV+ E + P ++ ++ + RL P
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC------KRLEIPR- 262
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
N+ ++ +I+E C P RP+ + LL+
Sbjct: 263 NLNPQVAAIIE---GCWTNEPWKRPSFATIMDLLR 294
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 162/334 (48%), Gaps = 38/334 (11%)
Query: 36 EEAHALLKWKTSLQNHNNKGSFLPSWTLNNATKISPCAWFGIHCN---HAGKVNSINLTS 92
++ ALL+ K L N S+LP+ N T W G+ C+ +VN+++L+
Sbjct: 6 QDKQALLQIKKDLGNPTTLSSWLPTTDCCNRT------WLGVLCDTDTQTYRVNNLDLSG 59
Query: 93 AGLIGTLHDFSFSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSS-NSFSGTIPPQ 151
L +P IPS +AN L +L + N+ G IPP
Sbjct: 60 LNLP--------KPYP---------------IPSSLANLPYLNFLYIGGINNLVGPIPPA 96
Query: 152 IGNLSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYL 211
I L+ L LY++ SG IP + + L L N LSG++PPS+ +L NL +
Sbjct: 97 IAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITF 156
Query: 212 YNNSLSGSIPSEIGNLKSL-SGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPL 270
N +SG+IP G+ L + + + N+L+G +P + NL NLA +DL N L G +
Sbjct: 157 DGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASV 215
Query: 271 SFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILY 330
FG+ N ++L NSL+ + ++G K+L GL L N++ G++P L L L L
Sbjct: 216 LFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLN 274
Query: 331 LSDNLLFGSIPCEIGNLRYLFYLELGDNK-LSGS 363
+S N L G IP + GNL+ +NK L GS
Sbjct: 275 VSFNNLCGEIP-QGGNLQRFDVSAYANNKCLCGS 307
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 116/246 (47%), Gaps = 33/246 (13%)
Query: 316 IPSSLGNLTKLTILYLSD-NLLFGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNL 374
IPSSL NL L LY+ N L G IP I L L YL + +SG+IP L + L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 375 ATLYLFTNLLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPYSFGNLTNMIVLSIYSNALSG 434
TL N LSG++P I +L N++ ++ N +SG
Sbjct: 128 VTLDFSYNALSGTLPPSI------------------------SSLPNLVGITFDGNRISG 163
Query: 435 AIPKEYGNLVKL-TLLVLSYNQLQGPIPDLRNLTRLARVRLDRNHLTGNISESFGIHSNL 493
AIP YG+ KL T + +S N+L G IP LA V L RN L G+ S FG N
Sbjct: 164 AIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNT 223
Query: 494 SYINLSHKKFYGEISFDWGKF---PNLGTLDVSANNITGILPPEIGDSPQLKVLDLSSNH 550
I+L+ ++FD GK NL LD+ N I G LP + L L++S N+
Sbjct: 224 QKIHLAKN----SLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNN 279
Query: 551 IVGEIP 556
+ GEIP
Sbjct: 280 LCGEIP 285
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 122/220 (55%), Gaps = 4/220 (1%)
Query: 172 IPPQIGHLSYLKALHLFE-NGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSEIGNLKSL 230
IP + +L YL L++ N L G IPP++ LT L +Y+ + ++SG+IP + +K+L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 231 SGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLTNL-DILNLPHNSLS 289
L+ YN LSG++P S+ +LPNL + N +SG+IP S+G+ + L + + N L+
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 290 GSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNLLFGSIPCEIGNLRY 349
G IP NL +L + LS N L G G+ ++L+ N L + ++G +
Sbjct: 188 GKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKN 245
Query: 350 LFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGSIP 389
L L+L +N++ G++P L L L +L + N L G IP
Sbjct: 246 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 27/229 (11%)
Query: 525 NNITGILPPEIGDSPQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELG 584
NN+ G +PP I QL L ++ ++ G IP L ++++L+ L + N SG LP +
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 585 SLIQLEHLDLSSNRLSNSIPGSLGNLVKLYY-LNLSNNQFSGEIPIKLEKFIHLSDLDLS 643
SL L + NR+S +IP S G+ KL+ + +S N+ +G+IP ++L+ +DLS
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFAN-LNLAFVDLS 205
Query: 644 HNFLGEEIPSQVCSMQSLEKLNLAHNNLS-----------------------GFIPRCFK 680
N L + S ++ +K++LA N+L+ G +P+
Sbjct: 206 RNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLT 265
Query: 681 EMHGLVYIDISYNKLHGPIPNSAAFKHAPMEALQGNKGLCGDIKGFPSC 729
++ L +++S+N L G IP + + A NK LCG P+C
Sbjct: 266 QLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG--SPLPAC 312
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 112/231 (48%), Gaps = 10/231 (4%)
Query: 244 MPLSLGNLPNLATLDLHD-NSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSL 302
+P SL NLP L L + N+L G IP + LT L L + H ++SG+IP + +K+L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 303 YGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNLLFGSIPCEIGNLRYLFY-LELGDNKLS 361
L S+N LSG++P S+ +L L + N + G+IP G+ LF + + N+L+
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 362 GSIPHSLGNLTNLATLYLFTNLLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPYSFGNL-- 419
G IP + NL NLA + L N+L G + + + G +
Sbjct: 188 GKIPPTFANL-NLAFVDLSRNMLEG----DASVLFGSDKNTQKIHLAKNSLAFDLGKVGL 242
Query: 420 -TNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQGPIPDLRNLTRL 469
N+ L + +N + G +P+ L L L +S+N L G IP NL R
Sbjct: 243 SKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRF 293
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 101 bits (251), Expect = 3e-21, Method: Composition-based stats.
Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 122
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S + SS TEL GT+ Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPEM 177
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 233
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 234 -RD-LISRL------LKHNPSQRPMLREV 254
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 100 bits (249), Expect = 5e-21, Method: Composition-based stats.
Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 122
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S + SS T+L GT+ Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 177
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 233
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 234 -RD-LISRL------LKHNPSQRPMLREV 254
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 100 bits (248), Expect = 5e-21, Method: Composition-based stats.
Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 122
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S + SS T+L GT+ Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 177
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 233
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 234 -RD-LISRL------LKHNPSQRPMLREV 254
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis Of
A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 99.8 bits (247), Expect = 7e-21, Method: Composition-based stats.
Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 123
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S + SS T+L GT+ Y+ PE+
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 178
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 234
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 235 -RD-LISRL------LKHNPSQRPMLREV 255
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 99.8 bits (247), Expect = 7e-21, Method: Composition-based stats.
Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 125
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S+ SS T L GT+ Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEM 180
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 236
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 237 -RD-LISRL------LKHNPSQRPMLREV 257
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 99.8 bits (247), Expect = 8e-21, Method: Composition-based stats.
Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 127
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S + SS T+L GT+ Y+ PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 182
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 238
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 239 -RD-LISRL------LKHNPSQRPMLREV 259
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 99.8 bits (247), Expect = 8e-21, Method: Composition-based stats.
Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 26/262 (9%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G+G G V + VAVK +SE EF E +++ ++ H +VKFYG
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE----DEFFQEAQTMMKLSHPKLVKFYGV 71
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
CS +IV EY+ G L L + + L +Q + + V + +++L + F +
Sbjct: 72 CSKEYPIYIVTEYISNGCLLNYLR--SHGKGLEPSQLLEMCYDVCEGMAFLESHQF---I 126
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD++++N L+D + VSDFG+++ + D + GT + + APE+ + K +
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDD--QYVSSVGTKFPVKWSAPEVFHYFKYSS 184
Query: 991 KSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLIS 1049
KSDV++FG+L E GK P D +N + L RL P D +
Sbjct: 185 KSDVWAFGILMWEVFSLGKMPYDLY-------TNSEVVLKVSQGHRLYRPHL-ASDTIYQ 236
Query: 1050 IMEVAISCLDENPDSRPTMQKV 1071
IM SC E P+ RPT Q++
Sbjct: 237 IM---YSCWHELPEKRPTFQQL 255
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 99.4 bits (246), Expect = 9e-21, Method: Composition-based stats.
Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 122
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S+ SS T L GT+ Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTXLCGTLDYLPPEM 177
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 233
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 234 -RD-LISRL------LKHNPSQRPMLREV 254
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea Inhibitor
Length = 267
Score = 99.4 bits (246), Expect = 1e-20, Method: Composition-based stats.
Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 121
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S+ SS T L GT+ Y+ PE+
Sbjct: 122 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEM 176
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 232
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 233 -RD-LISRL------LKHNPSQRPMLREV 253
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By A
Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine Aurora
Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 99.4 bits (246), Expect = 1e-20, Method: Composition-based stats.
Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 126
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S+ SS T L GT+ Y+ PE+
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEM 181
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 237
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 238 -RD-LISRL------LKHNPSQRPMLREV 258
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 98.6 bits (244), Expect = 1e-20, Method: Composition-based stats.
Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 127
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S+ SS T L GT+ Y+ PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEM 182
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 238
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 239 -RD-LISRL------LKHNPSQRPMLREV 259
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 98.6 bits (244), Expect = 2e-20, Method: Composition-based stats.
Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 125
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S+ SS T L GT+ Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEM 180
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 236
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 237 -RD-LISRL------LKHNPSQRPMLREV 257
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 98.6 bits (244), Expect = 2e-20, Method: Composition-based stats.
Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 122
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S+ SS T L GT+ Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEM 177
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 233
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 234 -RD-LISRL------LKHNPSQRPMLREV 254
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 98.2 bits (243), Expect = 2e-20, Method: Composition-based stats.
Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 139
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S+ SS T L GT+ Y+ PE+
Sbjct: 140 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEM 194
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 195 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 250
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 251 -RD-LISRL------LKHNPSQRPMLREV 271
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 98.2 bits (243), Expect = 2e-20, Method: Composition-based stats.
Identities = 68/263 (25%), Positives = 123/263 (46%), Gaps = 33/263 (12%)
Query: 829 SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLE 888
+GE++ +K+ + + Q+ FL EVK + + H N++KF G + + EY++
Sbjct: 34 TGEVMVMKEL---IRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIK 90
Query: 889 MGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEY 948
G+L I+ + S + W+QR++ K +A ++YLH+ I++RD++S N L+
Sbjct: 91 GGTLRGIIKSMDS--QYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENK 145
Query: 949 EAHVSDFGISKSL--------------KPDSSNWTELAGTIGYVAPELAYTMKVTEKSDV 994
V+DFG+++ + KPD + G ++APE+ EK DV
Sbjct: 146 NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDV 205
Query: 995 YSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEV 1053
+SFG++ E I + D++ N+ LD P P S +
Sbjct: 206 FSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPP----------SFFPI 255
Query: 1054 AISCLDENPDSRPTMQKVSQLLK 1076
+ C D +P+ RP+ K+ L+
Sbjct: 256 TVRCCDLDPEKRPSFVKLEHWLE 278
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 98.2 bits (243), Expect = 2e-20, Method: Composition-based stats.
Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 123
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S SS T L+GT+ Y+ PE+
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGW--SCHAPSSRRTTLSGTLDYLPPEM 178
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 234
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 235 -RD-LISRL------LKHNPSQRPMLREV 255
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 97.8 bits (242), Expect = 3e-20, Method: Composition-based stats.
Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 148
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S+ SS T L GT+ Y+ PE+
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEM 203
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 259
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 260 -RD-LISRL------LKHNPSQRPMLREV 280
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 97.8 bits (242), Expect = 3e-20, Method: Composition-based stats.
Identities = 82/269 (30%), Positives = 129/269 (47%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 127
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S+ SS T L GT+ Y+ PE
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEX 182
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 183 IEGRXHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 238
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 239 -RD-LISRL------LKHNPSQRPXLREV 259
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 97.8 bits (242), Expect = 3e-20, Method: Composition-based stats.
Identities = 81/269 (30%), Positives = 129/269 (47%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E I+A+K L + + + EV+ + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 119
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S + SS T L GT+ Y+ PE+
Sbjct: 120 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 174
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 230
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 231 -RD-LISRL------LKHNPSQRPMLREV 251
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 97.4 bits (241), Expect = 3e-20, Method: Composition-based stats.
Identities = 81/269 (30%), Positives = 129/269 (47%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 125
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S+ SS L GT+ Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRXXLCGTLDYLPPEM 180
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 236
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 237 -RD-LISRL------LKHNPSQRPMLREV 257
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic
Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic
Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 97.4 bits (241), Expect = 4e-20, Method: Composition-based stats.
Identities = 81/269 (30%), Positives = 130/269 (48%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 125
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S+ SS +L GT+ Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRDDLCGTLDYLPPEM 180
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 236
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 237 -RD-LISRL------LKHNPSQRPMLREV 257
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole Inhibitor
Length = 268
Score = 97.4 bits (241), Expect = 4e-20, Method: Composition-based stats.
Identities = 81/269 (30%), Positives = 129/269 (47%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 122
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S+ SS L GT+ Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRAALCGTLDYLPPEM 177
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 233
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 234 -RD-LISRL------LKHNPSQRPMLREV 254
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 97.1 bits (240), Expect = 4e-20, Method: Composition-based stats.
Identities = 81/269 (30%), Positives = 129/269 (47%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 122
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S+ SS L GT+ Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRXXLCGTLDYLPPEM 177
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 233
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 234 -RD-LISRL------LKHNPSQRPMLREV 254
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 97.1 bits (240), Expect = 5e-20, Method: Composition-based stats.
Identities = 82/269 (30%), Positives = 128/269 (47%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY G + L + +E + I +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE---QRTATYITELANALS 127
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S + SS T L GT+ Y+ PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 182
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 238
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 239 -RD-LISRL------LKHNPSQRPMLREV 259
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 97.1 bits (240), Expect = 5e-20, Method: Composition-based stats.
Identities = 83/290 (28%), Positives = 140/290 (48%), Gaps = 51/290 (17%)
Query: 814 IGTGGQGSVYRAE---LSSGE---IVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
+G G G V+ AE LS + +VAVK P L+ +++F E + LT ++H +I
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLA---ARKDFQREAELLTNLQHEHI 79
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSL----------AMILSNATSAE---ELGWTQRMNVI 914
VKFYG C +V+EY++ G L AMIL + + ELG +Q +++
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 915 KGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG- 973
+A + YL + F V+RD++++N L+ + DFG+S+ + S+++ + G
Sbjct: 140 SQIASGMVYLASQHF---VHRDLATRNCLVGANLLVKIGDFGMSRDVY--STDYYRVGGH 194
Query: 974 ---TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSI----CSTSSNLD 1025
I ++ PE K T +SDV+SFGV+ E GK P +S+ C T
Sbjct: 195 TMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQG--- 251
Query: 1026 RTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
R L+ PR+ P + +V + C P R ++++ ++L
Sbjct: 252 RVLER---PRV-CPK--------EVYDVMLGCWQREPQQRLNIKEIYKIL 289
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 96.7 bits (239), Expect = 6e-20, Method: Composition-based stats.
Identities = 81/269 (30%), Positives = 129/269 (47%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 125
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S+ SS L GT+ Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRAALCGTLDYLPPEM 180
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 236
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 237 -RD-LISRL------LKHNPSQRPMLREV 257
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor
Length = 272
Score = 96.7 bits (239), Expect = 6e-20, Method: Composition-based stats.
Identities = 81/269 (30%), Positives = 130/269 (48%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 125
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E +++FG S+ SS T L GT+ Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIANFGW--SVHAPSSRRTTLCGTLDYLPPEM 180
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 236
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 237 -RD-LISRL------LKHNPSQRPMLREV 257
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 96.7 bits (239), Expect = 6e-20, Method: Composition-based stats.
Identities = 81/269 (30%), Positives = 129/269 (47%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 124
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S+ SS L GT+ Y+ PE+
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRXXLCGTLDYLPPEM 179
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 235
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 236 -RD-LISRL------LKHNPSQRPMLREV 256
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 96.7 bits (239), Expect = 6e-20, Method: Composition-based stats.
Identities = 81/269 (30%), Positives = 130/269 (48%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 124
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E +++FG S+ SS T L GT+ Y+ PE+
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIANFGW--SVHAPSSRRTTLCGTLDYLPPEM 179
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 235
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 236 -RD-LISRL------LKHNPSQRPMLREV 256
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 96.7 bits (239), Expect = 7e-20, Method: Composition-based stats.
Identities = 81/269 (30%), Positives = 130/269 (48%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 148
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S+ SS +L GT+ Y+ PE+
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRDDLCGTLDYLPPEM 203
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 259
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 260 -RD-LISRL------LKHNPSQRPMLREV 280
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With [7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 96.7 bits (239), Expect = 7e-20, Method: Composition-based stats.
Identities = 66/205 (32%), Positives = 105/205 (51%), Gaps = 9/205 (4%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DFD +G G G+VY A E S I+A+K L + + + EV+ + +RH
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
NI++ YG+ A +++ EY +G++ L + +E + I +A+ALSY H
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE---QRTATYITELANALSYCH 129
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT 985
+ +++RDI +N+LL E ++DFG S+ SS T L GT+ Y+ PE+
Sbjct: 130 SK---RVIHRDIKPENLLLGSNGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 986 MKVTEKSDVYSFGVLALEAIKGKHP 1010
EK D++S GVL E + G P
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 96.7 bits (239), Expect = 7e-20, Method: Composition-based stats.
Identities = 81/269 (30%), Positives = 129/269 (47%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY +G++ L + +E + I +A+ALS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 123
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S+ SS L GT+ Y+ PE+
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRDTLCGTLDYLPPEM 178
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 234
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 235 -RD-LISRL------LKHNPSQRPMLREV 255
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic
Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A Pentacyclic
Inhibitor
Length = 268
Score = 96.3 bits (238), Expect = 8e-20, Method: Composition-based stats.
Identities = 80/269 (29%), Positives = 130/269 (48%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E +S I+A+K L + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ + +++ EY +G++ L + +E + I +A+ALS
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 122
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S+ SS L GT+ Y+ PE+
Sbjct: 123 YCHSK---KVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRAALCGTLDYLPPEM 177
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQDTYKRISRV--EFTFPDFVTEGA- 233
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 234 -RD-LISRL------LKHNPSQRPMLREV 254
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 96.3 bits (238), Expect = 9e-20, Method: Composition-based stats.
Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 11/198 (5%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G+VY A ++++G+ VA+++ + L + ++ +NE+ + E ++ NIV +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
++V EYL GSL +++ E Q V + AL +LH++ +
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVCRECLQALEFLHSN---QV 137
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
++RDI S N+LL ++ ++DFG + P+ S +E+ GT ++APE+ K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKV 197
Query: 993 DVYSFGVLALEAIKGKHP 1010
D++S G++A+E I+G+ P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 94.7 bits (234), Expect = 3e-19, Method: Composition-based stats.
Identities = 81/269 (30%), Positives = 127/269 (47%), Gaps = 21/269 (7%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A DF+ +G G G+VY A E S I+A+K L + + + EV+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
RH NI++ YG+ A +++ EY G + L + +E + I +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE---QRTATYITELANALS 127
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
Y H+ +++RDI +N+LL E ++DFG S+ SS L GT+ Y+ PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRXXLXGTLDYLPPEM 182
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
EK D++S GVL E + GK P + ++ T + R E P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRV--EFTFPDFVTEGA- 238
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RD LIS + L NP RP +++V
Sbjct: 239 -RD-LISRL------LKHNPSQRPMLREV 259
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-4-
Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-8-
Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 94.4 bits (233), Expect = 3e-19, Method: Composition-based stats.
Identities = 75/260 (28%), Positives = 126/260 (48%), Gaps = 26/260 (10%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+GTG G V + VA+K +SE EF+ E K + + H +V+ YG
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYGV 78
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
C+ R FI+ EY+ G L L Q + + K V +A+ YL + F +
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESKQF---L 133
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD++++N L++ + VSDFG+S+ + D +T G+ + + PE+ K +
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSS 191
Query: 991 KSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLIS 1049
KSD+++FGVL E GK P + ++ T+ ++ + L + P L + +K+ +
Sbjct: 192 KSDIWAFGVLMWEIYSLGKMPYERFTN-SETAEHIAQGL-RLYRPHLAS------EKVYT 243
Query: 1050 IMEVAISCLDENPDSRPTMQ 1069
IM SC E D RPT +
Sbjct: 244 IM---YSCWHEKADERPTFK 260
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 94.4 bits (233), Expect = 3e-19, Method: Composition-based stats.
Identities = 75/260 (28%), Positives = 126/260 (48%), Gaps = 26/260 (10%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+GTG G V + VA+K +SE EF+ E K + + H +V+ YG
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYGV 71
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
C+ R FI+ EY+ G L L Q + + K V +A+ YL + F +
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESKQF---L 126
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD++++N L++ + VSDFG+S+ + D +T G+ + + PE+ K +
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSS 184
Query: 991 KSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLIS 1049
KSD+++FGVL E GK P + ++ T+ ++ + L + P L + +K+ +
Sbjct: 185 KSDIWAFGVLMWEIYSLGKMPYERFTN-SETAEHIAQGL-RLYRPHLAS------EKVYT 236
Query: 1050 IMEVAISCLDENPDSRPTMQ 1069
IM SC E D RPT +
Sbjct: 237 IM---YSCWHEKADERPTFK 253
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 94.4 bits (233), Expect = 3e-19, Method: Composition-based stats.
Identities = 75/260 (28%), Positives = 126/260 (48%), Gaps = 26/260 (10%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+GTG G V + VA+K +SE EF+ E K + + H +V+ YG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
C+ R FI+ EY+ G L L Q + + K V +A+ YL + F +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESKQF---L 127
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD++++N L++ + VSDFG+S+ + D +T G+ + + PE+ K +
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSS 185
Query: 991 KSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLIS 1049
KSD+++FGVL E GK P + ++ T+ ++ + L + P L + +K+ +
Sbjct: 186 KSDIWAFGVLMWEIYSLGKMPYERFTN-SETAEHIAQGL-RLYRPHLAS------EKVYT 237
Query: 1050 IMEVAISCLDENPDSRPTMQ 1069
IM SC E D RPT +
Sbjct: 238 IM---YSCWHEKADERPTFK 254
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 94.4 bits (233), Expect = 3e-19, Method: Composition-based stats.
Identities = 75/260 (28%), Positives = 126/260 (48%), Gaps = 26/260 (10%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+GTG G V + VA+K +SE EF+ E K + + H +V+ YG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
C+ R FI+ EY+ G L L Q + + K V +A+ YL + F +
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESKQF---L 142
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD++++N L++ + VSDFG+S+ + D +T G+ + + PE+ K +
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 991 KSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLIS 1049
KSD+++FGVL E GK P + ++ T+ ++ + L + P L + +K+ +
Sbjct: 201 KSDIWAFGVLMWEIYSLGKMPYERFTN-SETAEHIAQGL-RLYRPHLAS------EKVYT 252
Query: 1050 IMEVAISCLDENPDSRPTMQ 1069
IM SC E D RPT +
Sbjct: 253 IM---YSCWHEKADERPTFK 269
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 94.4 bits (233), Expect = 3e-19, Method: Composition-based stats.
Identities = 75/260 (28%), Positives = 126/260 (48%), Gaps = 26/260 (10%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+GTG G V + VA+K +SE EF+ E K + + H +V+ YG
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYGV 67
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
C+ R FI+ EY+ G L L Q + + K V +A+ YL + F +
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESKQF---L 122
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD++++N L++ + VSDFG+S+ + D +T G+ + + PE+ K +
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSS 180
Query: 991 KSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLIS 1049
KSD+++FGVL E GK P + ++ T+ ++ + L + P L + +K+ +
Sbjct: 181 KSDIWAFGVLMWEIYSLGKMPYERFTN-SETAEHIAQGL-RLYRPHLAS------EKVYT 232
Query: 1050 IMEVAISCLDENPDSRPTMQ 1069
IM SC E D RPT +
Sbjct: 233 IM---YSCWHEKADERPTFK 249
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 94.4 bits (233), Expect = 3e-19, Method: Composition-based stats.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 9/205 (4%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DFD +G G G+VY A E S I+A+K L + + + EV+ + +RH
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
NI++ YG+ A +++ EY +G++ L + +E + I +A+ALSY H
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE---QRTATYITELANALSYCH 129
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT 985
+ +++RDI +N+LL E ++DFG S+ SS L GT+ Y+ PE+
Sbjct: 130 SK---RVIHRDIKPENLLLGSNGELKIADFGW--SVHAPSSRRDTLCGTLDYLPPEMIEG 184
Query: 986 MKVTEKSDVYSFGVLALEAIKGKHP 1010
EK D++S GVL E + G P
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 94.4 bits (233), Expect = 3e-19, Method: Composition-based stats.
Identities = 79/271 (29%), Positives = 134/271 (49%), Gaps = 28/271 (10%)
Query: 808 FDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
FD +G G GSVY+A +G+IVA+K+ P+ S++ QE + E+ + + +
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV--PVESDL---QEIIKEISIMQQCDSPH 85
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMI--LSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK+YG +IV EY GS++ I L N T E+ T + +KG L YL
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKG----LEYL 141
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H F ++RDI + N+LL+ E A ++DFG++ L + + GT ++APE+
Sbjct: 142 H---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQ 198
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIR 1044
+ +D++S G+ A+E +GK P I + + + P P P+ +
Sbjct: 199 EIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI----------FMIPTNPPPTFR-K 247
Query: 1045 DKLIS--IMEVAISCLDENPDSRPTMQKVSQ 1073
+L S + CL ++P+ R T ++ Q
Sbjct: 248 PELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 94.0 bits (232), Expect = 4e-19, Method: Composition-based stats.
Identities = 75/260 (28%), Positives = 126/260 (48%), Gaps = 26/260 (10%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+GTG G V + VA+K +SE EF+ E K + + H +V+ YG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
C+ R FI+ EY+ G L L Q + + K V +A+ YL + F +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESKQF---L 127
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD++++N L++ + VSDFG+S+ + D +T G+ + + PE+ K +
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSRGSKFPVRWSPPEVLMYSKFSS 185
Query: 991 KSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLIS 1049
KSD+++FGVL E GK P + ++ T+ ++ + L + P L + +K+ +
Sbjct: 186 KSDIWAFGVLMWEIYSLGKMPYERFTN-SETAEHIAQGL-RLYRPHLAS------EKVYT 237
Query: 1050 IMEVAISCLDENPDSRPTMQ 1069
IM SC E D RPT +
Sbjct: 238 IM---YSCWHEKADERPTFK 254
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 94.0 bits (232), Expect = 4e-19, Method: Composition-based stats.
Identities = 57/198 (28%), Positives = 107/198 (54%), Gaps = 11/198 (5%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G+VY A ++++G+ VA+++ + L + ++ +NE+ + E ++ NIV +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLD 85
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
++V EYL GSL +++ E Q V + AL +LH++ +
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVCRECLQALEFLHSN---QV 138
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
++RDI S N+LL ++ ++DFG + P+ S + + GT ++APE+ K
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKV 198
Query: 993 DVYSFGVLALEAIKGKHP 1010
D++S G++A+E I+G+ P
Sbjct: 199 DIWSLGIMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 94.0 bits (232), Expect = 4e-19, Method: Composition-based stats.
Identities = 57/198 (28%), Positives = 107/198 (54%), Gaps = 11/198 (5%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G+VY A ++++G+ VA+++ + L + ++ +NE+ + E ++ NIV +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
++V EYL GSL +++ E Q V + AL +LH++ +
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVCRECLQALEFLHSN---QV 137
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
++RDI S N+LL ++ ++DFG + P+ S + + GT ++APE+ K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKV 197
Query: 993 DVYSFGVLALEAIKGKHP 1010
D++S G++A+E I+G+ P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 93.6 bits (231), Expect = 5e-19, Method: Composition-based stats.
Identities = 57/198 (28%), Positives = 107/198 (54%), Gaps = 11/198 (5%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G+VY A ++++G+ VA+++ + L + ++ +NE+ + E ++ NIV +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
++V EYL GSL +++ E Q V + AL +LH++ +
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVCRECLQALEFLHSN---QV 137
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
++RDI S N+LL ++ ++DFG + P+ S + + GT ++APE+ K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 197
Query: 993 DVYSFGVLALEAIKGKHP 1010
D++S G++A+E I+G+ P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of Activation
For Tec Family Kinases
Length = 283
Score = 93.6 bits (231), Expect = 6e-19, Method: Composition-based stats.
Identities = 75/260 (28%), Positives = 125/260 (48%), Gaps = 26/260 (10%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+GTG G V + VA+K +SE EF+ E K + + H +V+ YG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
C+ R FI+ EY+ G L L Q + + K V +A+ YL + F +
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESKQF---L 142
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD++++N L++ + VSDFG+S+ + D T G+ + + PE+ K +
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE--TSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 991 KSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLIS 1049
KSD+++FGVL E GK P + ++ T+ ++ + L + P L + +K+ +
Sbjct: 201 KSDIWAFGVLMWEIYSLGKMPYERFTN-SETAEHIAQGL-RLYRPHLAS------EKVYT 252
Query: 1050 IMEVAISCLDENPDSRPTMQ 1069
IM SC E D RPT +
Sbjct: 253 IM---YSCWHEKADERPTFK 269
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 92.8 bits (229), Expect = 8e-19, Method: Composition-based stats.
Identities = 86/302 (28%), Positives = 137/302 (45%), Gaps = 49/302 (16%)
Query: 798 YEEIVRATNDFDEE---------HCIGTGGQGSVYRAELS-SGE---IVAVKKFHSPLLS 844
YEE RA F E IG+G G V L G+ VA+K +
Sbjct: 32 YEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTE 91
Query: 845 EMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEE 904
+++FL+E + + H NI++ G + R + IV EY+E GSL L T +
Sbjct: 92 RQ--RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR--THDGQ 147
Query: 905 LGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPD 964
Q + +++GV + YL + + V+RD++++NVL+D VSDFG+S+ L+ D
Sbjct: 148 FTIMQLVGMLRGVGAGMRYLSDLGY---VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
Query: 965 -SSNWTELAGTIG--YVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHP------RDFI 1014
+ +T G I + APE + SDV+SFGV+ E + G+ P RD I
Sbjct: 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
Query: 1015 SSICSTSSNLDRTLDEILDPRLPAP-SCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
SS+ RLPAP C ++ ++ + C ++ RP ++
Sbjct: 265 SSVEEGY-------------RLPAPMGCP-----HALHQLMLDCWHKDRAQRPRFSQIVS 306
Query: 1074 LL 1075
+L
Sbjct: 307 VL 308
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 92.4 bits (228), Expect = 1e-18, Method: Composition-based stats.
Identities = 78/275 (28%), Positives = 130/275 (47%), Gaps = 29/275 (10%)
Query: 811 EHCIGTGGQGSVYRAEL--SSGEI---VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
+ IG G G VY+ L SSG+ VA+K + + + +FL E + + H
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQ--RVDFLGEAGIMGQFSHH 106
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
NI++ G S + I+ EY+E G+L L E Q + +++G+A + YL
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYLA 164
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPD-SSNWTELAGTIG--YVAPEL 982
N + V+RD++++N+L++ VSDFG+S+ L+ D + +T G I + APE
Sbjct: 165 NMNY---VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 983 AYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDP-RLPAPS 1040
K T SDV+SFG++ E + G+ P +S+ + I D RLP P
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--------HEVMKAINDGFRLPTP- 272
Query: 1041 CNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
D +I ++ + C + RP + +L
Sbjct: 273 ---MDCPSAIYQLMMQCWQQERARRPKFADIVSIL 304
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 92.0 bits (227), Expect = 2e-18, Method: Composition-based stats.
Identities = 85/302 (28%), Positives = 134/302 (44%), Gaps = 49/302 (16%)
Query: 798 YEEIVRATNDFDEE---------HCIGTGGQGSVYRAELS-SGE---IVAVKKFHSPLLS 844
YEE RA F E IG+G G V L G+ VA+K +
Sbjct: 32 YEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTE 91
Query: 845 EMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEE 904
+++FL+E + + H NI++ G + R + IV EY+E GSL L T +
Sbjct: 92 RQ--RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR--THDGQ 147
Query: 905 LGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPD 964
Q + +++GV + YL + + V+RD++++NVL+D VSDFG+S+ L+ D
Sbjct: 148 FTIMQLVGMLRGVGAGMRYLSDLGY---VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
Query: 965 SSNWTELAG---TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHP------RDFI 1014
G I + APE + SDV+SFGV+ E + G+ P RD I
Sbjct: 205 PDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
Query: 1015 SSICSTSSNLDRTLDEILDPRLPAP-SCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
SS+ RLPAP C ++ ++ + C ++ RP ++
Sbjct: 265 SSVEEGY-------------RLPAPMGCP-----HALHQLMLDCWHKDRAQRPRFSQIVS 306
Query: 1074 LL 1075
+L
Sbjct: 307 VL 308
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 91.7 bits (226), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/198 (28%), Positives = 107/198 (54%), Gaps = 11/198 (5%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G+VY A ++++G+ VA+++ + L + ++ +NE+ + E ++ NIV +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLD 85
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
++V EYL GSL +++ E Q V + AL +LH++ +
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVCRECLQALEFLHSN---QV 138
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
++R+I S N+LL ++ ++DFG + P+ S + + GT ++APE+ K
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 198
Query: 993 DVYSFGVLALEAIKGKHP 1010
D++S G++A+E I+G+ P
Sbjct: 199 DIWSLGIMAIEMIEGEPP 216
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 147/302 (48%), Gaps = 35/302 (11%)
Query: 791 TFDRKIAYEEIVRATNDFDEE---------HCIGTGGQGSVYRAEL---SSGEI-VAVKK 837
TF YE+ + ++F +E +G G G V L S EI VA+K
Sbjct: 21 TFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 838 FHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS 897
+ +++FL E + + H NI++ G + ++ IV EY+E GSL L
Sbjct: 81 LKVGYTEKQ--RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 898 NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGI 957
+ + Q + +++G+A + YL + + V+RD++++N+L++ VSDFG+
Sbjct: 139 KHDA--QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGL 193
Query: 958 SKSLKPD-SSNWTELAGT--IGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDF 1013
S+ L+ D + +T G I + +PE K T SDV+S+G++ E + G+ P
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 1014 ISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
+S + ++ + +DE RLP P D ++ ++ + C ++ ++RP +++
Sbjct: 254 MS-----NQDVIKAVDEGY--RLPPPM----DCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
Query: 1074 LL 1075
+L
Sbjct: 303 IL 304
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 147/302 (48%), Gaps = 35/302 (11%)
Query: 791 TFDRKIAYEEIVRATNDFDEE---------HCIGTGGQGSVYRAEL---SSGEI-VAVKK 837
TF +E+ + ++F +E +G G G V L S EI VA+K
Sbjct: 21 TFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 838 FHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS 897
+ +++FL E + + H NI++ G + ++ IV EY+E GSL L
Sbjct: 81 LKVGYTEKQ--RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 898 NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGI 957
+ + Q + +++G+A + YL + F V+RD++++N+L++ VSDFG+
Sbjct: 139 KHDA--QFTVIQLVGMLRGIASGMKYLSDMGF---VHRDLAARNILINSNLVCKVSDFGL 193
Query: 958 SKSLKPD-SSNWTELAGT--IGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDF 1013
S+ L+ D + +T G I + +PE K T SDV+S+G++ E + G+ P
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 1014 ISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
+S + ++ + +DE RLP P D ++ ++ + C ++ ++RP +++
Sbjct: 254 MS-----NQDVIKAVDEGY--RLPPPM----DCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
Query: 1074 LL 1075
+L
Sbjct: 303 IL 304
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Phosphorylated,
Amp-pnp Bound
Length = 373
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 145/296 (48%), Gaps = 35/296 (11%)
Query: 797 AYEEIVRATNDFDEE---------HCIGTGGQGSVYRAEL---SSGEI-VAVKKFHSPLL 843
YE+ + ++F +E +G G G V L S EI VA+K
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 844 SEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAE 903
+ +++FL E + + H NI++ G + ++ IV EY+E GSL L +
Sbjct: 87 EKQ--RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-- 142
Query: 904 ELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKP 963
+ Q + +++G+A + YL + + V+RD++++N+L++ VSDFG+S+ L+
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 964 D-SSNWTELAGT--IGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICS 1019
D + +T G I + +PE K T SDV+S+G++ E + G+ P +S
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS---- 255
Query: 1020 TSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
+ ++ + +DE RLP P D ++ ++ + C ++ ++RP +++ +L
Sbjct: 256 -NQDVIKAVDEGY--RLPPPM----DCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 145/296 (48%), Gaps = 35/296 (11%)
Query: 797 AYEEIVRATNDFDEE---------HCIGTGGQGSVYRAEL---SSGEI-VAVKKFHSPLL 843
YE+ + ++F +E +G G G V L S EI VA+K
Sbjct: 25 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 84
Query: 844 SEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAE 903
+ +++FL E + + H NI++ G + ++ IV EY+E GSL L +
Sbjct: 85 EKQ--RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-- 140
Query: 904 ELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKP 963
+ Q + +++G+A + YL + + V+RD++++N+L++ VSDFG+S+ L+
Sbjct: 141 QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLED 197
Query: 964 D-SSNWTELAGT--IGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICS 1019
D + +T G I + +PE K T SDV+S+G++ E + G+ P +S
Sbjct: 198 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS---- 253
Query: 1020 TSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
+ ++ + +DE RLP P D ++ ++ + C ++ ++RP +++ +L
Sbjct: 254 -NQDVIKAVDEGY--RLPPPM----DCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 302
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 90.9 bits (224), Expect = 3e-18, Method: Composition-based stats.
Identities = 79/284 (27%), Positives = 136/284 (47%), Gaps = 41/284 (14%)
Query: 811 EHCIGTGGQGSVYRAELSS----GEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
E IG G G V R L + VA+K ++EFL+E + + H N
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ--RREFLSEASIMGQFEHPN 78
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
I++ G +++ I+ E++E G+L L + + Q + +++G+A + YL
Sbjct: 79 IIRLEGVVTNSMPVMILTEFMENGALDSFLR--LNDGQFTVIQLVGMLRGIASGMRYLAE 136
Query: 927 DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTE---LAGTIG--YVAPE 981
+ V+RD++++N+L++ VSDFG+S+ L+ +SS+ TE L G I + APE
Sbjct: 137 MSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE 193
Query: 982 LAYTMKVTEKSDVYSFGVLALEAIK-GKHP------RDFISSICSTSSNLDRTLDEILDP 1034
K T SD +S+G++ E + G+ P +D I++I D
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ-------------DY 240
Query: 1035 RLPAPSCNIRDKLISIMEVAISCLDENPDSRPTM-QKVSQLLKI 1077
RLP P D S+ ++ + C ++ ++RP Q VS L K+
Sbjct: 241 RLPPPP----DCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 90.9 bits (224), Expect = 4e-18, Method: Composition-based stats.
Identities = 85/291 (29%), Positives = 139/291 (47%), Gaps = 30/291 (10%)
Query: 790 LTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTC 848
L F Y++ D +H +G G G VY + VAVK L E T
Sbjct: 10 LYFQGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTM 64
Query: 849 Q-QEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGW 907
+ +EFL E + EI+H N+V+ G C+ +I+ E++ G+L L + +E+
Sbjct: 65 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVNA 123
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN 967
+ + ++ A+ YL F ++RD++++N L+ + V+DFG+S+ + D+
Sbjct: 124 VVLLYMATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-- 178
Query: 968 WTELAGT---IGYVAPE-LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSS 1022
+T AG I + APE LAY K + KSDV++FGVL E A G P I S
Sbjct: 179 YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LS 232
Query: 1023 NLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
+ L++ D R+ P +K+ +M +C NP RP+ ++ Q
Sbjct: 233 QVYELLEK--DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 277
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032
Length = 289
Score = 90.5 bits (223), Expect = 4e-18, Method: Composition-based stats.
Identities = 73/267 (27%), Positives = 130/267 (48%), Gaps = 28/267 (10%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG+G G+VY+ + V + +P ++ Q F NEV L + RH NI+ F G+
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 88
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S A IV ++ E SL L + + E+ + +++ + A + YLH I+
Sbjct: 89 -STAPQLAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAK---SII 142
Query: 934 YRDISSKNVLLDLEYEAHVSDFGIS--KSLKPDSSNWTELAGTIGYVAPE---LAYTMKV 988
+RD+ S N+ L + + DFG++ KS S + +L+G+I ++APE + +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 989 TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEI----LDPRLPAPSCNIR 1044
+ +SDVY+FG++ E + G+ P S +N D+ ++ + L P L N
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPY-------SNINNRDQIIEMVGRGSLSPDLSKVRSNCP 255
Query: 1045 DKLISIMEVAISCLDENPDSRPTMQKV 1071
++ +M CL + D RP+ ++
Sbjct: 256 KRMKRLMA---ECLKKKRDERPSFPRI 279
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp
From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 134/275 (48%), Gaps = 28/275 (10%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRAELSSGE-IVAVKKF---HSPLLSEMTCQ-QEFLNEVKS 858
A N+ + E IG GG G V++ L + +VA+K S +EM + QEF EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 859 LTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVA 918
++ + H NIVK YG + +V E++ G L L + A + W+ ++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 919 DALSYLHNDCFPPIVYRDISSKNVLLDLEYE-----AHVSDFGISKSLKPDSSNWTELAG 973
+ Y+ N PPIV+RD+ S N+ L E A V+DFG+S+ + + L G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ---SVHSVSGLLG 188
Query: 974 TIGYVAPEL--AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEI 1031
++APE A TEK+D YSF ++ + G+ P D S N+ R +E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR--EEG 246
Query: 1032 LDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRP 1066
L P +P C R L +++E+ C +P RP
Sbjct: 247 LRPTIPE-DCPPR--LRNVIEL---CWSGDPKKRP 275
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii-
38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 137/273 (50%), Gaps = 26/273 (9%)
Query: 811 EHCIGTGGQGSVYRAEL---SSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
+ +G G G V L S EI VA+K + +++FL E + + H N
Sbjct: 38 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ--RRDFLGEASIMGQFDHPN 95
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
I++ G + ++ IV EY+E GSL L + + Q + +++G+A + YL +
Sbjct: 96 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSD 153
Query: 927 DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPD-SSNWTELAGT--IGYVAPELA 983
+ V+RD++++N+L++ VSDFG+S+ L+ D + +T G I + +PE
Sbjct: 154 MGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 210
Query: 984 YTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
K T SDV+S+G++ E + G+ P +S + ++ + +DE RLP P
Sbjct: 211 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-----NQDVIKAVDEGY--RLPPPM-- 261
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
D ++ ++ + C ++ ++RP +++ +L
Sbjct: 262 --DCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 292
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 90.5 bits (223), Expect = 5e-18, Method: Composition-based stats.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 798 YEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNE 855
Y++ D +H +G G G VY + VAVK L E T + +EFL E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKE 59
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+ EI+H N+V+ G C+ +I+ E++ G+L L + +E+ + +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC-NRQEVSAVVLLYMAT 118
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT- 974
++ A+ YL F ++RD++++N L+ + V+DFG+S+ + D+ +T AG
Sbjct: 119 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 173
Query: 975 --IGYVAPE-LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDE 1030
I + APE LAY K + KSDV++FGVL E A G P I S + L++
Sbjct: 174 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEK 227
Query: 1031 ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
D R+ P +K+ +M +C NP RP+ ++ Q
Sbjct: 228 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 264
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid Leukemi
Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid Leukemi
Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 90.5 bits (223), Expect = 5e-18, Method: Composition-based stats.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 798 YEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNE 855
Y++ D +H +G G G VY + VAVK L E T + +EFL E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKE 59
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+ EI+H N+V+ G C+ +I+ E++ G+L L + +E+ + +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC-NRQEVSAVVLLYMAT 118
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT- 974
++ A+ YL F ++RD++++N L+ + V+DFG+S+ + D+ +T AG
Sbjct: 119 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 173
Query: 975 --IGYVAPE-LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDE 1030
I + APE LAY K + KSDV++FGVL E A G P I S + L++
Sbjct: 174 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEK 227
Query: 1031 ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
D R+ P +K+ +M +C NP RP+ ++ Q
Sbjct: 228 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 264
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 90.5 bits (223), Expect = 5e-18, Method: Composition-based stats.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 798 YEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNE 855
Y++ D +H +G G G VY + VAVK L E T + +EFL E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKE 64
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+ EI+H N+V+ G C+ +I+ E++ G+L L + +E+ + +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC-NRQEVNAVVLLYMAT 123
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT- 974
++ A+ YL F ++RD++++N L+ + V+DFG+S+ + D+ +T AG
Sbjct: 124 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 178
Query: 975 --IGYVAPE-LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDE 1030
I + APE LAY K + KSDV++FGVL E A G P I S + L++
Sbjct: 179 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEK 232
Query: 1031 ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
D R+ P +K+ +M +C NP RP+ ++ Q
Sbjct: 233 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 269
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out
Inhibitor Ap24534
Length = 284
Score = 90.5 bits (223), Expect = 5e-18, Method: Composition-based stats.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 798 YEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNE 855
Y++ D +H +G G G VY + VAVK L E T + +EFL E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKE 59
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+ EI+H N+V+ G C+ +I+ E++ G+L L + +E+ + +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMAT 118
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT- 974
++ A+ YL F ++RD++++N L+ + V+DFG+S+ + D+ +T AG
Sbjct: 119 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 173
Query: 975 --IGYVAPE-LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDE 1030
I + APE LAY K + KSDV++FGVL E A G P I S + L++
Sbjct: 174 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEK 227
Query: 1031 ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
D R+ P +K+ +M +C NP RP+ ++ Q
Sbjct: 228 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 264
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 90.5 bits (223), Expect = 5e-18, Method: Composition-based stats.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 798 YEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNE 855
Y++ D +H +G G G VY + VAVK L E T + +EFL E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKE 59
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+ EI+H N+V+ G C+ +I+ E++ G+L L + +E+ + +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMAT 118
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT- 974
++ A+ YL F ++RD++++N L+ + V+DFG+S+ + D+ +T AG
Sbjct: 119 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 173
Query: 975 --IGYVAPE-LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDE 1030
I + APE LAY K + KSDV++FGVL E A G P I S + L++
Sbjct: 174 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEK 227
Query: 1031 ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
D R+ P +K+ +M +C NP RP+ ++ Q
Sbjct: 228 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 264
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1) I
Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1) I
Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
Length = 293
Score = 90.5 bits (223), Expect = 5e-18, Method: Composition-based stats.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 798 YEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNE 855
Y++ D +H +G G G VY + VAVK L E T + +EFL E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKE 64
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+ EI+H N+V+ G C+ +I+ E++ G+L L + +E+ + +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMAT 123
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT- 974
++ A+ YL F ++RD++++N L+ + V+DFG+S+ + D+ +T AG
Sbjct: 124 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 178
Query: 975 --IGYVAPE-LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDE 1030
I + APE LAY K + KSDV++FGVL E A G P I S + L++
Sbjct: 179 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEK 232
Query: 1031 ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
D R+ P +K+ +M +C NP RP+ ++ Q
Sbjct: 233 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 269
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 90.1 bits (222), Expect = 5e-18, Method: Composition-based stats.
Identities = 82/274 (29%), Positives = 134/274 (48%), Gaps = 30/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNEVKSLTEIRH 864
D +H +G G G VY + VAVK L E T + +EFL E + EI+H
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 66
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
N+V+ G C+ +I+ E++ G+L L + +E+ + + ++ A+ YL
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYL 125
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPE 981
F ++RD++++N L+ + V+DFG+S+ + D+ +T AG I + APE
Sbjct: 126 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--FTAHAGAKFPIKWTAPE 180
Query: 982 -LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAP 1039
LAY K + KSDV++FGVL E A G P I S + L++ D R+ P
Sbjct: 181 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID-----PSQVYELLEK--DYRMERP 232
Query: 1040 SCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
+K+ +M +C NP RP+ ++ Q
Sbjct: 233 E-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 262
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dp- 987
Length = 277
Score = 90.1 bits (222), Expect = 5e-18, Method: Composition-based stats.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 798 YEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNE 855
Y++ D +H +G G G VY + VAVK L E T + +EFL E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKE 64
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+ EI+H N+V+ G C+ +I+ E++ G+L L + +E+ + +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMAT 123
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT- 974
++ A+ YL F ++RD++++N L+ + V+DFG+S+ + D+ +T AG
Sbjct: 124 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 178
Query: 975 --IGYVAPE-LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDE 1030
I + APE LAY K + KSDV++FGVL E A G P I S + L++
Sbjct: 179 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEK 232
Query: 1031 ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
D R+ P +K+ +M +C NP RP+ ++ Q
Sbjct: 233 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Inno-406
Length = 293
Score = 90.1 bits (222), Expect = 5e-18, Method: Composition-based stats.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 798 YEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNE 855
Y++ D +H +G G G VY + VAVK L E T + +EFL E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKE 64
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+ EI+H N+V+ G C+ +I+ E++ G+L L + +E+ + +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMAT 123
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT- 974
++ A+ YL F ++RD++++N L+ + V+DFG+S+ + D+ +T AG
Sbjct: 124 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 178
Query: 975 --IGYVAPE-LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDE 1030
I + APE LAY K + KSDV++FGVL E A G P I S + L++
Sbjct: 179 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEK 232
Query: 1031 ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
D R+ P +K+ +M +C NP RP+ ++ Q
Sbjct: 233 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 269
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 90.1 bits (222), Expect = 5e-18, Method: Composition-based stats.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 798 YEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNE 855
Y++ D +H +G G G VY + VAVK L E T + +EFL E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKE 59
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+ EI+H N+V+ G C+ +I+ E++ G+L L + +E+ + +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMAT 118
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT- 974
++ A+ YL F ++RD++++N L+ + V+DFG+S+ + D+ +T AG
Sbjct: 119 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 173
Query: 975 --IGYVAPE-LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDE 1030
I + APE LAY K + KSDV++FGVL E A G P I S + L++
Sbjct: 174 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEK 227
Query: 1031 ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
D R+ P +K+ +M +C NP RP+ ++ Q
Sbjct: 228 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 264
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 90.1 bits (222), Expect = 5e-18, Method: Composition-based stats.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 798 YEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNE 855
Y++ D +H +G G G VY + VAVK L E T + +EFL E
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKE 63
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+ EI+H N+V+ G C+ +I+ E++ G+L L + +E+ + +
Sbjct: 64 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMAT 122
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT- 974
++ A+ YL F ++RD++++N L+ + V+DFG+S+ + D+ +T AG
Sbjct: 123 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 177
Query: 975 --IGYVAPE-LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDE 1030
I + APE LAY K + KSDV++FGVL E A G P I S + L++
Sbjct: 178 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEK 231
Query: 1031 ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
D R+ P +K+ +M +C NP RP+ ++ Q
Sbjct: 232 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 268
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 90.1 bits (222), Expect = 5e-18, Method: Composition-based stats.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 798 YEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNE 855
Y++ D +H +G G G VY + VAVK L E T + +EFL E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKE 59
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+ EI+H N+V+ G C+ +I+ E++ G+L L + +E+ + +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMAT 118
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT- 974
++ A+ YL F ++RD++++N L+ + V+DFG+S+ + D+ +T AG
Sbjct: 119 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 173
Query: 975 --IGYVAPE-LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDE 1030
I + APE LAY K + KSDV++FGVL E A G P I S + L++
Sbjct: 174 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEK 227
Query: 1031 ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
D R+ P +K+ +M +C NP RP+ ++ Q
Sbjct: 228 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 264
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 90.1 bits (222), Expect = 5e-18, Method: Composition-based stats.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 798 YEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNE 855
Y++ D +H +G G G VY + VAVK L E T + +EFL E
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKE 61
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+ EI+H N+V+ G C+ +I+ E++ G+L L + +E+ + +
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMAT 120
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT- 974
++ A+ YL F ++RD++++N L+ + V+DFG+S+ + D+ +T AG
Sbjct: 121 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 175
Query: 975 --IGYVAPE-LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDE 1030
I + APE LAY K + KSDV++FGVL E A G P I S + L++
Sbjct: 176 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEK 229
Query: 1031 ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
D R+ P +K+ +M +C NP RP+ ++ Q
Sbjct: 230 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 266
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 90.1 bits (222), Expect = 5e-18, Method: Composition-based stats.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 798 YEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNE 855
Y++ D +H +G G G VY + VAVK L E T + +EFL E
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKE 61
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+ EI+H N+V+ G C+ +I+ E++ G+L L + +E+ + +
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMAT 120
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT- 974
++ A+ YL F ++RD++++N L+ + V+DFG+S+ + D+ +T AG
Sbjct: 121 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 175
Query: 975 --IGYVAPE-LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDE 1030
I + APE LAY K + KSDV++FGVL E A G P I S + L++
Sbjct: 176 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEK 229
Query: 1031 ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
D R+ P +K+ +M +C NP RP+ ++ Q
Sbjct: 230 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 266
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl
Mutant In Complex With The Aurora Kinase Inhibitor Vx-680
Length = 287
Score = 90.1 bits (222), Expect = 5e-18, Method: Composition-based stats.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 798 YEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNE 855
Y++ D +H +G G G VY + VAVK L E T + +EFL E
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKE 60
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+ EI+H N+V+ G C+ +I+ E++ G+L L + +E+ + +
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMAT 119
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT- 974
++ A+ YL F ++RD++++N L+ + V+DFG+S+ + D+ +T AG
Sbjct: 120 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAK 174
Query: 975 --IGYVAPE-LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDE 1030
I + APE LAY K + KSDV++FGVL E A G P I S + L++
Sbjct: 175 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEK 228
Query: 1031 ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
D R+ P +K+ +M +C NP RP+ ++ Q
Sbjct: 229 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 265
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
Length = 287
Score = 90.1 bits (222), Expect = 5e-18, Method: Composition-based stats.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 798 YEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNE 855
Y++ D +H +G G G VY + VAVK L E T + +EFL E
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKE 61
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+ EI+H N+V+ G C+ +I+ E++ G+L L + +E+ + +
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMAT 120
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT- 974
++ A+ YL F ++RD++++N L+ + V+DFG+S+ + D+ +T AG
Sbjct: 121 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAK 175
Query: 975 --IGYVAPE-LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDE 1030
I + APE LAY K + KSDV++FGVL E A G P I S + L++
Sbjct: 176 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEK 229
Query: 1031 ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
D R+ P +K+ +M +C NP RP+ ++ Q
Sbjct: 230 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 266
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 147/302 (48%), Gaps = 35/302 (11%)
Query: 791 TFDRKIAYEEIVRATNDFDEE---------HCIGTGGQGSVYRAEL---SSGEI-VAVKK 837
TF +E+ + ++F +E +G G G V L S EI VA+K
Sbjct: 21 TFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 838 FHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS 897
+ +++FL E + + H NI++ G + ++ IV EY+E GSL L
Sbjct: 81 LKVGYTEKQ--RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 898 NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGI 957
+ + Q + +++G+A + YL + + V+RD++++N+L++ VSDFG+
Sbjct: 139 KHDA--QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGL 193
Query: 958 SKSLKPD-SSNWTELAGT--IGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDF 1013
S+ L+ D + +T G I + +PE K T SDV+S+G++ E + G+ P
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 1014 ISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
+S + ++ + +DE RLP P D ++ ++ + C ++ ++RP +++
Sbjct: 254 MS-----NQDVIKAVDEGY--RLPPPM----DCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
Query: 1074 LL 1075
+L
Sbjct: 303 IL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 137/273 (50%), Gaps = 26/273 (9%)
Query: 811 EHCIGTGGQGSVYRAEL---SSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
+ +G G G V L S EI VA+K + +++FL E + + H N
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ--RRDFLGEASIMGQFDHPN 107
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
I++ G + ++ IV EY+E GSL L + + Q + +++G+A + YL +
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSD 165
Query: 927 DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPD-SSNWTELAGT--IGYVAPELA 983
+ V+RD++++N+L++ VSDFG+S+ L+ D + +T G I + +PE
Sbjct: 166 MGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 984 YTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
K T SDV+S+G++ E + G+ P +S + ++ + +DE RLP P
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-----NQDVIKAVDEGY--RLPPPM-- 273
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
D ++ ++ + C ++ ++RP +++ +L
Sbjct: 274 --DCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 89.7 bits (221), Expect = 7e-18, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 118/276 (42%), Gaps = 27/276 (9%)
Query: 807 DFDE---EHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIR 863
DF E E IG GG G VYRA E+ H P + E K ++
Sbjct: 5 DFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK 64
Query: 864 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSY 923
H NI+ G C + +V E+ G L +LS ++ +N +A ++Y
Sbjct: 65 HPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDI----LVNWAVQIARGMNY 120
Query: 924 LHNDCFPPIVYRDISSKNVLLDLEYE--------AHVSDFGISKSLKPDSSNWTELAGTI 975
LH++ PI++RD+ S N+L+ + E ++DFG+++ + AG
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK--MSAAGAY 178
Query: 976 GYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPR 1035
++APE+ ++ SDV+S+GVL E + G+ P I + L
Sbjct: 179 AWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKL------A 232
Query: 1036 LPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
LP PS + +ME C + +P SRP+ +
Sbjct: 233 LPIPS-TCPEPFAKLME---DCWNPDPHSRPSFTNI 264
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 89.7 bits (221), Expect = 7e-18, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 136/270 (50%), Gaps = 26/270 (9%)
Query: 814 IGTGGQGSVYRAEL---SSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVK 869
+G G G V L S EI VA+K + +++FL E + + H NI++
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ--RRDFLGEASIMGQFDHPNIIR 81
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
G + ++ IV EY+E GSL L + + Q + +++G+A + YL + +
Sbjct: 82 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMGY 139
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPD-SSNWTELAGTIG--YVAPELAYTM 986
V+RD++++N+L++ VSDFG+S+ L+ D + +T G I + +PE
Sbjct: 140 ---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 196
Query: 987 KVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRD 1045
K T SDV+S+G++ E + G+ P +S + ++ + +DE RLP P D
Sbjct: 197 KFTSASDVWSYGIVLWEVMSYGERPYWEMS-----NQDVIKAVDE--GYRLPPP----MD 245
Query: 1046 KLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
++ ++ + C ++ ++RP +++ +L
Sbjct: 246 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 89.7 bits (221), Expect = 7e-18, Method: Composition-based stats.
Identities = 82/274 (29%), Positives = 133/274 (48%), Gaps = 30/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNEVKSLTEIRH 864
D +H +G G G VY + VAVK L E T + +EFL E + EI+H
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 66
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
N+V+ G C+ +I+ E++ G+L L + +E+ + + ++ A+ YL
Sbjct: 67 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYL 125
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPE 981
F ++RD++++N L+ + V+DFG+S+ + D+ T AG I + APE
Sbjct: 126 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE 180
Query: 982 -LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAP 1039
LAY K + KSDV++FGVL E A G P I S + L++ D R+ P
Sbjct: 181 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID-----PSQVYELLEK--DYRMERP 232
Query: 1040 SCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
+K+ +M +C NP RP+ ++ Q
Sbjct: 233 E-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 262
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 133/275 (48%), Gaps = 28/275 (10%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRAELSSGE-IVAVKKF---HSPLLSEMTCQ-QEFLNEVKS 858
A N+ + E IG GG G V++ L + +VA+K S +EM + QEF EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 859 LTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVA 918
++ + H NIVK YG + +V E++ G L L + A + W+ ++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 919 DALSYLHNDCFPPIVYRDISSKNVLLDLEYE-----AHVSDFGISKSLKPDSSNWTELAG 973
+ Y+ N PPIV+RD+ S N+ L E A V+DFG S+ + + L G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ---SVHSVSGLLG 188
Query: 974 TIGYVAPEL--AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEI 1031
++APE A TEK+D YSF ++ + G+ P D S N+ R +E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR--EEG 246
Query: 1032 LDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRP 1066
L P +P C R L +++E+ C +P RP
Sbjct: 247 LRPTIPE-DCPPR--LRNVIEL---CWSGDPKKRP 275
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 147/302 (48%), Gaps = 35/302 (11%)
Query: 791 TFDRKIAYEEIVRATNDFDEE---------HCIGTGGQGSVYRAEL---SSGEI-VAVKK 837
TF +E+ + ++F +E +G G G V L S EI VA+K
Sbjct: 21 TFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 838 FHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS 897
+ +++FL E + + H NI++ G + ++ IV EY+E GSL L
Sbjct: 81 LKVGYTEKQ--RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 898 NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGI 957
+ + Q + +++G+A + YL + + V+RD++++N+L++ VSDFG+
Sbjct: 139 KHDA--QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGL 193
Query: 958 SKSLKPD-SSNWTELAGT--IGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDF 1013
++ L+ D + +T G I + +PE K T SDV+S+G++ E + G+ P
Sbjct: 194 ARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 1014 ISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
+S + ++ + +DE RLP P D ++ ++ + C ++ ++RP +++
Sbjct: 254 MS-----NQDVIKAVDEGY--RLPPPM----DCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
Query: 1074 LL 1075
+L
Sbjct: 303 IL 304
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 89.4 bits (220), Expect = 1e-17, Method: Composition-based stats.
Identities = 78/284 (27%), Positives = 135/284 (47%), Gaps = 41/284 (14%)
Query: 811 EHCIGTGGQGSVYRAELSS----GEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
E IG G G V R L + VA+K ++EFL+E + + H N
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ--RREFLSEASIMGQFEHPN 76
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
I++ G +++ I+ E++E G+L L + + Q + +++G+A + YL
Sbjct: 77 IIRLEGVVTNSMPVMILTEFMENGALDSFLR--LNDGQFTVIQLVGMLRGIASGMRYLAE 134
Query: 927 DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT---ELAGTIG--YVAPE 981
+ V+RD++++N+L++ VSDFG+S+ L+ +SS+ T L G I + APE
Sbjct: 135 MSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 982 LAYTMKVTEKSDVYSFGVLALEAIK-GKHP------RDFISSICSTSSNLDRTLDEILDP 1034
K T SD +S+G++ E + G+ P +D I++I D
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ-------------DY 238
Query: 1035 RLPAPSCNIRDKLISIMEVAISCLDENPDSRPTM-QKVSQLLKI 1077
RLP P D S+ ++ + C ++ ++RP Q VS L K+
Sbjct: 239 RLPPPP----DCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Query: 814 IGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + SSG++VAVKK L + ++ NEV + + +H N+V+ Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYN 215
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
++V E+LE G+L I+++ EE Q V V ALS LH +
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG---V 268
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
++RDI S ++LL + +SDFG + + L GT ++APEL + +
Sbjct: 269 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 993 DVYSFGVLALEAIKGKHP 1010
D++S G++ +E + G+ P
Sbjct: 329 DIWSLGIMVIEMVDGEPP 346
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 89.4 bits (220), Expect = 1e-17, Method: Composition-based stats.
Identities = 83/283 (29%), Positives = 136/283 (48%), Gaps = 30/283 (10%)
Query: 798 YEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNE 855
Y++ D +H +G G G VY + VAVK L E T + +EFL E
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKE 60
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+ EI+H N+V+ G C+ +I+ E++ G+L L + +E+ + +
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC-NRQEVNAVVLLYMAT 119
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT- 974
++ A+ YL F ++RD++++N L+ + V+DFG+S+ + D+ T AG
Sbjct: 120 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAK 174
Query: 975 --IGYVAPE-LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDE 1030
I + APE LAY K + KSDV++FGVL E A G P I S + L++
Sbjct: 175 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEK 228
Query: 1031 ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
D R+ P +K+ +M +C NP RP+ ++ Q
Sbjct: 229 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 265
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 89.0 bits (219), Expect = 1e-17, Method: Composition-based stats.
Identities = 83/283 (29%), Positives = 136/283 (48%), Gaps = 30/283 (10%)
Query: 798 YEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNE 855
Y++ D +H +G G G VY + VAVK L E T + +EFL E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKE 64
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+ EI+H N+V+ G C+ +I+ E++ G+L L + +E+ + +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMAT 123
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT- 974
++ A+ YL F ++RD++++N L+ + V+DFG+S+ + D+ T AG
Sbjct: 124 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAK 178
Query: 975 --IGYVAPE-LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDE 1030
I + APE LAY K + KSDV++FGVL E A G P I S + L++
Sbjct: 179 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEK 232
Query: 1031 ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
D R+ P +K+ +M +C NP RP+ ++ Q
Sbjct: 233 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 269
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 89.0 bits (219), Expect = 1e-17, Method: Composition-based stats.
Identities = 82/274 (29%), Positives = 133/274 (48%), Gaps = 30/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNEVKSLTEIRH 864
D +H +G G G VY + VAVK L E T + +EFL E + EI+H
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 66
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
N+V+ G C+ +I+ E++ G+L L + +E+ + + ++ A+ YL
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYL 125
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPE 981
F ++RD++++N L+ + V+DFG+S+ + D+ T AG I + APE
Sbjct: 126 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE 180
Query: 982 -LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAP 1039
LAY K + KSDV++FGVL E A G P I S + L++ D R+ P
Sbjct: 181 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID-----PSQVYELLEK--DYRMERP 232
Query: 1040 SCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
+K+ +M +C NP RP+ ++ Q
Sbjct: 233 E-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 262
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g
Triple Mutant
Length = 373
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 146/302 (48%), Gaps = 35/302 (11%)
Query: 791 TFDRKIAYEEIVRATNDFDEE---------HCIGTGGQGSVYRAEL---SSGEI-VAVKK 837
TF +E+ + ++F +E +G G G V L S EI VA+K
Sbjct: 21 TFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 838 FHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS 897
+ +++FL E + + H NI++ G + ++ IV EY+E GSL L
Sbjct: 81 LKVGYTEKQ--RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 898 NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGI 957
+ + Q + +++G+A + YL + + V+RD++++N+L++ VSDFG+
Sbjct: 139 KHDA--QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGL 193
Query: 958 SKSLKPD-SSNWTELAGT--IGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDF 1013
+ L+ D + +T G I + +PE K T SDV+S+G++ E + G+ P
Sbjct: 194 GRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 1014 ISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
+S + ++ + +DE RLP P D ++ ++ + C ++ ++RP +++
Sbjct: 254 MS-----NQDVIKAVDEGY--RLPPPM----DCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
Query: 1074 LL 1075
+L
Sbjct: 303 IL 304
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 136/286 (47%), Gaps = 30/286 (10%)
Query: 798 YEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNE 855
Y++ D +H +G G G VY + VAVK L E T + +EFL E
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVK-----TLKEDTMEVEEFLKE 305
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+ EI+H N+V+ G C+ +I+ E++ G+L L +E+ + +
Sbjct: 306 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMAT 364
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT- 974
++ A+ YL F ++R+++++N L+ + V+DFG+S+ + D+ +T AG
Sbjct: 365 QISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 419
Query: 975 --IGYVAPE-LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDE 1030
I + APE LAY K + KSDV++FGVL E A G P I + L++
Sbjct: 420 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEK---- 473
Query: 1031 ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
D R+ P +K+ +M +C NP RP+ ++ Q +
Sbjct: 474 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 513
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 137/286 (47%), Gaps = 30/286 (10%)
Query: 798 YEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNE 855
Y++ D +H +G G G VY + VAVK L E T + +EFL E
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVK-----TLKEDTMEVEEFLKE 263
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+ EI+H N+V+ G C+ +I+ E++ G+L L + +E+ + +
Sbjct: 264 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMAT 322
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT- 974
++ A+ YL F ++R+++++N L+ + V+DFG+S+ + D+ +T AG
Sbjct: 323 QISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 377
Query: 975 --IGYVAPE-LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDE 1030
I + APE LAY K + KSDV++FGVL E A G P I + L++
Sbjct: 378 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEK---- 431
Query: 1031 ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
D R+ P +K+ +M +C NP RP+ ++ Q +
Sbjct: 432 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 471
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 138/286 (48%), Gaps = 30/286 (10%)
Query: 798 YEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNE 855
Y++ D +H +G G G VY + VAVK L E T + +EFL E
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVK-----TLKEDTMEVEEFLKE 266
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+ EI+H N+V+ G C+ +I+ E++ G+L L + +E+ + +
Sbjct: 267 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMAT 325
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT- 974
++ A+ YL F ++R+++++N L+ + V+DFG+S+ + D+ +T AG
Sbjct: 326 QISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 380
Query: 975 --IGYVAPE-LAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDE 1030
I + APE LAY K + KSDV++FGVL E A G P I S + L++
Sbjct: 381 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEK 434
Query: 1031 ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
D R+ P +K+ +M +C NP RP+ ++ Q +
Sbjct: 435 --DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 474
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 130/267 (48%), Gaps = 28/267 (10%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG+G G+VY+ + V + +P ++ Q F NEV L + RH NI+ F G+
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 76
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
+ + + IV ++ E SL L + + E+ + +++ + A + YLH I+
Sbjct: 77 STKPQLA-IVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---II 130
Query: 934 YRDISSKNVLLDLEYEAHVSDFGIS--KSLKPDSSNWTELAGTIGYVAPELAYTMK---V 988
+RD+ S N+ L + + DFG++ KS S + +L+G+I ++APE+
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 989 TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEI----LDPRLPAPSCNIR 1044
+ +SDVY+FG++ E + G+ P S +N D+ ++ + L P L N
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLP-------YSNINNRDQIIEMVGRGSLSPDLSKVRSNCP 243
Query: 1045 DKLISIMEVAISCLDENPDSRPTMQKV 1071
++ +M CL + D RP+ ++
Sbjct: 244 KRMKRLM---AECLKKKRDERPSFPRI 267
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 144/296 (48%), Gaps = 35/296 (11%)
Query: 797 AYEEIVRATNDFDEE---------HCIGTGGQGSVYRAEL---SSGEI-VAVKKFHSPLL 843
YE+ + ++F +E +G G G V L S EI VA+K
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 844 SEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAE 903
+ +++FL E + + H NI++ G + ++ IV E +E GSL L +
Sbjct: 87 EKQ--RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA-- 142
Query: 904 ELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKP 963
+ Q + +++G+A + YL + + V+RD++++N+L++ VSDFG+S+ L+
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 964 D-SSNWTELAGT--IGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICS 1019
D + +T G I + +PE K T SDV+S+G++ E + G+ P +S
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS---- 255
Query: 1020 TSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
+ ++ + +DE RLP P D ++ ++ + C ++ ++RP +++ +L
Sbjct: 256 -NQDVIKAVDEGY--RLPPPM----DCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
Length = 287
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 133/275 (48%), Gaps = 28/275 (10%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRAELSSGE-IVAVKKF---HSPLLSEMTCQ-QEFLNEVKS 858
A N+ + E IG GG G V++ L + +VA+K S +EM + QEF EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 859 LTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVA 918
++ + H NIVK YG + +V E++ G L L + A + W+ ++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 919 DALSYLHNDCFPPIVYRDISSKNVLLDLEYE-----AHVSDFGISKSLKPDSSNWTELAG 973
+ Y+ N PPIV+RD+ S N+ L E A V+DF +S+ + + L G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ---SVHSVSGLLG 188
Query: 974 TIGYVAPEL--AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEI 1031
++APE A TEK+D YSF ++ + G+ P D S N+ R +E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR--EEG 246
Query: 1032 LDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRP 1066
L P +P C R L +++E+ C +P RP
Sbjct: 247 LRPTIPE-DCPPR--LRNVIEL---CWSGDPKKRP 275
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203
Length = 292
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 130/267 (48%), Gaps = 28/267 (10%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG+G G+VY+ + V + +P ++ Q F NEV L + RH NI+ F G+
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 88
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
+ + + IV ++ E SL L + + E+ + +++ + A + YLH I+
Sbjct: 89 STKPQLA-IVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---II 142
Query: 934 YRDISSKNVLLDLEYEAHVSDFGIS--KSLKPDSSNWTELAGTIGYVAPELAYTMK---V 988
+RD+ S N+ L + + DFG++ KS S + +L+G+I ++APE+
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 989 TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEI----LDPRLPAPSCNIR 1044
+ +SDVY+FG++ E + G+ P S +N D+ ++ + L P L N
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLP-------YSNINNRDQIIEMVGRGSLSPDLSKVRSNCP 255
Query: 1045 DKLISIMEVAISCLDENPDSRPTMQKV 1071
++ +M CL + D RP+ ++
Sbjct: 256 KRMKRLM---AECLKKKRDERPSFPRI 279
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex
With A Consensus Peptide
Length = 301
Score = 87.4 bits (215), Expect = 3e-17, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Query: 814 IGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + SSG++VAVKK L + ++ NEV + + +H N+V+ Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYN 93
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
++V E+LE G+L I+++ EE Q V V ALS LH +
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQ---GV 146
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
++RDI S ++LL + +SDFG + + L GT ++APEL + +
Sbjct: 147 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 993 DVYSFGVLALEAIKGKHP 1010
D++S G++ +E + G+ P
Sbjct: 207 DIWSLGIMVIEMVDGEPP 224
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 87.4 bits (215), Expect = 4e-17, Method: Composition-based stats.
Identities = 76/295 (25%), Positives = 142/295 (48%), Gaps = 35/295 (11%)
Query: 798 YEEIVRATNDFDEE---------HCIGTGGQGSVYRAELS---SGEI-VAVKKFHSPLLS 844
YE+ +A ++F +E IG G G V L E+ VA+K
Sbjct: 5 YEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTE 64
Query: 845 EMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEE 904
+ +++FL E + + H NI+ G + ++ IV EY+E GSL L +
Sbjct: 65 KQ--RRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDG--Q 120
Query: 905 LGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPD 964
Q + +++G++ + YL + + V+RD++++N+L++ VSDFG+S+ L+ D
Sbjct: 121 FTVIQLVGMLRGISAGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDD 177
Query: 965 -SSNWTELAGTIG--YVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICST 1020
+ +T G I + APE K T SDV+S+G++ E + G+ P + T
Sbjct: 178 PEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEM-----T 232
Query: 1021 SSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
+ ++ + ++E RLP+P D ++ ++ + C + +SRP ++ +L
Sbjct: 233 NQDVIKAVEE--GYRLPSP----MDCPAALYQLMLDCWQKERNSRPKFDEIVNML 281
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 87.4 bits (215), Expect = 4e-17, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A E +G+ VAVKK L + ++ NEV + + H N+V Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMD---LRKQQRRELLFNEVVIMRDYHHDNVVDMYS 109
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
++V E+LE G+L I+++ EE Q V V ALSYLHN +
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIATVCLSVLRALSYLHNQ---GV 162
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
++RDI S ++LL + +SDFG + + L GT ++APE+ + +
Sbjct: 163 IHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 993 DVYSFGVLALEAIKGKHP 1010
D++S G++ +E I G+ P
Sbjct: 223 DIWSLGIMVIEMIDGEPP 240
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 87.4 bits (215), Expect = 4e-17, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Query: 814 IGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + SSG++VAVKK L + ++ NEV + + +H N+V+ Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYN 138
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
++V E+LE G+L I+++ EE Q V V ALS LH +
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQ---GV 191
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
++RDI S ++LL + +SDFG + + L GT ++APEL + +
Sbjct: 192 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 993 DVYSFGVLALEAIKGKHP 1010
D++S G++ +E + G+ P
Sbjct: 252 DIWSLGIMVIEMVDGEPP 269
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 87.4 bits (215), Expect = 4e-17, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Query: 814 IGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + SSG++VAVKK L + ++ NEV + + +H N+V+ Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYN 84
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
++V E+LE G+L I+++ EE Q V V ALS LH +
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQ---GV 137
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
++RDI S ++LL + +SDFG + + L GT ++APEL + +
Sbjct: 138 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 993 DVYSFGVLALEAIKGKHP 1010
D++S G++ +E + G+ P
Sbjct: 198 DIWSLGIMVIEMVDGEPP 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 87.4 bits (215), Expect = 4e-17, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Query: 814 IGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + SSG++VAVKK L + ++ NEV + + +H N+V+ Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYN 88
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
++V E+LE G+L I+++ EE Q V V ALS LH +
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQ---GV 141
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
++RDI S ++LL + +SDFG + + L GT ++APEL + +
Sbjct: 142 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 993 DVYSFGVLALEAIKGKHP 1010
D++S G++ +E + G+ P
Sbjct: 202 DIWSLGIMVIEMVDGEPP 219
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 87.4 bits (215), Expect = 4e-17, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Query: 814 IGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + SSG++VAVKK L + ++ NEV + + +H N+V+ Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYN 95
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
++V E+LE G+L I+++ EE Q V V ALS LH +
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQ---GV 148
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
++RDI S ++LL + +SDFG + + L GT ++APEL + +
Sbjct: 149 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 993 DVYSFGVLALEAIKGKHP 1010
D++S G++ +E + G+ P
Sbjct: 209 DIWSLGIMVIEMVDGEPP 226
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 86.7 bits (213), Expect = 6e-17, Method: Composition-based stats.
Identities = 79/287 (27%), Positives = 139/287 (48%), Gaps = 40/287 (13%)
Query: 796 IAYEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNE 855
I Y+EI + E +G G G V +A+ + + VA+K+ S SE ++ F+ E
Sbjct: 6 IDYKEI-------EVEEVVGRGAFGVVCKAKWRAKD-VAIKQIESE--SE---RKAFIVE 52
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNA------TSAEELGWTQ 909
++ L+ + H NIVK YG C + +V EY E GSL +L A T+A + W
Sbjct: 53 LRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC- 109
Query: 910 RMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSDFGISKSLKPDSSNW 968
+ +GVA YLH+ +++RD+ N+LL + DFG + ++ ++
Sbjct: 110 -LQCSQGVA----YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THM 161
Query: 969 TELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTL 1028
T G+ ++APE+ +EK DV+S+G++ E I + P D I R +
Sbjct: 162 TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF------RIM 215
Query: 1029 DEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
+ + P N+ + S+M C ++P RP+M+++ +++
Sbjct: 216 WAVHNGTRPPLIKNLPKPIESLM---TRCWSKDPSQRPSMEEIVKIM 259
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 86.7 bits (213), Expect = 6e-17, Method: Composition-based stats.
Identities = 70/266 (26%), Positives = 126/266 (47%), Gaps = 24/266 (9%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G V+ + VA+K +S + FL E + + +++H +V+ Y
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSP----ESFLEEAQIMKKLKHDKLVQLYAV 72
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S +IV EY+ GSL L + L +++ VA ++Y+ + +
Sbjct: 73 VSE-EPIYIVTEYMNKGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIERMNY---I 127
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-TIGYVAPELAYTMKVTEKS 992
+RD+ S N+L+ ++DFG+++ ++ + + A I + APE A + T KS
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 993 DVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEI-LDPRLPAPSCNIRDKLISI 1050
DV+SFG+L E + KG+ P N L+++ R+P P +D IS+
Sbjct: 188 DVWSFGILLTELVTKGRVP--------YPGMNNREVLEQVERGYRMPCP----QDCPISL 235
Query: 1051 MEVAISCLDENPDSRPTMQKVSQLLK 1076
E+ I C ++P+ RPT + + L+
Sbjct: 236 HELMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its
Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 86.7 bits (213), Expect = 6e-17, Method: Composition-based stats.
Identities = 79/287 (27%), Positives = 139/287 (48%), Gaps = 40/287 (13%)
Query: 796 IAYEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNE 855
I Y+EI + E +G G G V +A+ + + VA+K+ S SE ++ F+ E
Sbjct: 5 IDYKEI-------EVEEVVGRGAFGVVCKAKWRAKD-VAIKQIESE--SE---RKAFIVE 51
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNA------TSAEELGWTQ 909
++ L+ + H NIVK YG C + +V EY E GSL +L A T+A + W
Sbjct: 52 LRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC- 108
Query: 910 RMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSDFGISKSLKPDSSNW 968
+ +GVA YLH+ +++RD+ N+LL + DFG + ++ ++
Sbjct: 109 -LQCSQGVA----YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THM 160
Query: 969 TELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTL 1028
T G+ ++APE+ +EK DV+S+G++ E I + P D I R +
Sbjct: 161 TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF------RIM 214
Query: 1029 DEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
+ + P N+ + S+M C ++P RP+M+++ +++
Sbjct: 215 WAVHNGTRPPLIKNLPKPIESLM---TRCWSKDPSQRPSMEEIVKIM 258
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 86.7 bits (213), Expect = 6e-17, Method: Composition-based stats.
Identities = 62/203 (30%), Positives = 102/203 (50%), Gaps = 7/203 (3%)
Query: 807 DFDEEHCIGTGGQGSVYRAELSS-GEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D++ + IGTG G + S G+I+ K+ ++E +Q ++EV L E++H
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAE-KQMLVSEVNLLRELKHP 65
Query: 866 NIVKFYGFCSHARHS--FIVYEYLEMGSLAMILSNATSAEE-LGWTQRMNVIKGVADALS 922
NIV++Y ++ +IV EY E G LA +++ T + L + V+ + AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 923 YLH--NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAP 980
H +D +++RD+ NV LD + + DFG+++ L D E GT Y++P
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSP 185
Query: 981 ELAYTMKVTEKSDVYSFGVLALE 1003
E M EKSD++S G L E
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 86.7 bits (213), Expect = 7e-17, Method: Composition-based stats.
Identities = 71/270 (26%), Positives = 135/270 (50%), Gaps = 26/270 (9%)
Query: 814 IGTGGQGSVYRAEL---SSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVK 869
+G G G V L S EI VA+K + +++FL E + + H NI++
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ--RRDFLGEASIMGQFDHPNIIR 81
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
G + ++ IV E +E GSL L + + Q + +++G+A + YL + +
Sbjct: 82 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMGY 139
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPD-SSNWTELAGTIG--YVAPELAYTM 986
V+RD++++N+L++ VSDFG+S+ L+ D + +T G I + +PE
Sbjct: 140 ---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 196
Query: 987 KVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRD 1045
K T SDV+S+G++ E + G+ P +S + ++ + +DE RLP P D
Sbjct: 197 KFTSASDVWSYGIVLWEVMSYGERPYWEMS-----NQDVIKAVDE--GYRLPPP----MD 245
Query: 1046 KLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
++ ++ + C ++ ++RP +++ +L
Sbjct: 246 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 86.3 bits (212), Expect = 8e-17, Method: Composition-based stats.
Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 7/203 (3%)
Query: 807 DFDEEHCIGTGGQGSVYRAELSS-GEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D++ + IGTG G + S G+I+ K+ ++E +Q ++EV L E++H
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAE-KQMLVSEVNLLRELKHP 65
Query: 866 NIVKFYGFCSHARHS--FIVYEYLEMGSLAMILSNATSAEE-LGWTQRMNVIKGVADALS 922
NIV++Y ++ +IV EY E G LA +++ T + L + V+ + AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 923 YLH--NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAP 980
H +D +++RD+ NV LD + + DFG+++ L D+S GT Y++P
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSP 185
Query: 981 ELAYTMKVTEKSDVYSFGVLALE 1003
E M EKSD++S G L E
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 86.3 bits (212), Expect = 8e-17, Method: Composition-based stats.
Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 7/203 (3%)
Query: 807 DFDEEHCIGTGGQGSVYRAELSS-GEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D++ + IGTG G + S G+I+ K+ ++E +Q ++EV L E++H
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAE-KQMLVSEVNLLRELKHP 65
Query: 866 NIVKFYGFCSHARHS--FIVYEYLEMGSLAMILSNATSAEE-LGWTQRMNVIKGVADALS 922
NIV++Y ++ +IV EY E G LA +++ T + L + V+ + AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 923 YLH--NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAP 980
H +D +++RD+ NV LD + + DFG+++ L D+S GT Y++P
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSP 185
Query: 981 ELAYTMKVTEKSDVYSFGVLALE 1003
E M EKSD++S G L E
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 86.3 bits (212), Expect = 8e-17, Method: Composition-based stats.
Identities = 84/300 (28%), Positives = 138/300 (46%), Gaps = 38/300 (12%)
Query: 797 AYEEIVRATNDFDEEHC-----IGTGGQGSVYRAEL-----SSGEIVAVKKFHSPLLSEM 846
A+E+ R F+E H +G G GSV ++GE+VAVKK +
Sbjct: 1 AFED--RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL 58
Query: 847 TCQQEFLNEVKSLTEIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNATSAEE 904
++F E++ L ++H NIVK+ G C A R+ ++ EYL GSL L AE
Sbjct: 59 ---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--AHAER 113
Query: 905 LGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPD 964
+ + + + + YL + ++RD++++N+L++ E + DFG++K L D
Sbjct: 114 IDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQD 170
Query: 965 SSNWT---ELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAI----KGKH-PRDFISS 1016
I + APE K + SDV+SFGV+ E K K P +F+
Sbjct: 171 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 230
Query: 1017 ICSTSSN--LDRTLDEIL--DPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVS 1072
I + + L E+L + RLP P D++ IM C + N + RP+ + ++
Sbjct: 231 IGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 286
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 85.9 bits (211), Expect = 1e-16, Method: Composition-based stats.
Identities = 73/272 (26%), Positives = 129/272 (47%), Gaps = 33/272 (12%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG+G G V+ + + VA+K +SE ++F+ E + + ++ H +V+ YG
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE----EDFIEEAEVMMKLSHPKLVQLYGV 68
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNAT---SAEELGWTQRMNVIKGVADALSYLHNDCFP 930
C +V+E++E G L+ L +AE L + + V + ++YL C
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC-- 121
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMK 987
+++RD++++N L+ VSDFG+++ + D +T GT + + +PE+ +
Sbjct: 122 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 178
Query: 988 VTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDK 1046
+ KSDV+SFGVL E +GK P + SN + D RL P R
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDISTGFRLYKP----RLA 227
Query: 1047 LISIMEVAISCLDENPDSRPTMQK-VSQLLKI 1077
+ ++ C E P+ RP + + QL +I
Sbjct: 228 STHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 259
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
469
Length = 266
Score = 85.9 bits (211), Expect = 1e-16, Method: Composition-based stats.
Identities = 73/272 (26%), Positives = 129/272 (47%), Gaps = 33/272 (12%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG+G G V+ + + VA+K +SE ++F+ E + + ++ H +V+ YG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE----EDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNAT---SAEELGWTQRMNVIKGVADALSYLHNDCFP 930
C +V+E++E G L+ L +AE L + + V + ++YL C
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC-- 123
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMK 987
+++RD++++N L+ VSDFG+++ + D +T GT + + +PE+ +
Sbjct: 124 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 180
Query: 988 VTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDK 1046
+ KSDV+SFGVL E +GK P + SN + D RL P R
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDISTGFRLYKP----RLA 229
Query: 1047 LISIMEVAISCLDENPDSRPTMQK-VSQLLKI 1077
+ ++ C E P+ RP + + QL +I
Sbjct: 230 STHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 261
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 145/302 (48%), Gaps = 35/302 (11%)
Query: 791 TFDRKIAYEEIVRATNDFDEE---------HCIGTGGQGSVYRAEL---SSGEI-VAVKK 837
TF +E+ + ++F +E +G G G V L S EI VA+K
Sbjct: 21 TFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 838 FHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS 897
+ +++FL E + + H NI++ G + ++ IV E +E GSL L
Sbjct: 81 LKVGYTEKQ--RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR 138
Query: 898 NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGI 957
+ + Q + +++G+A + YL + V+RD++++N+L++ VSDFG+
Sbjct: 139 KHDA--QFTVIQLVGMLRGIASGMKYLSD---MGAVHRDLAARNILINSNLVCKVSDFGL 193
Query: 958 SKSLKPD-SSNWTELAGT--IGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDF 1013
S+ L+ D + +T G I + +PE K T SDV+S+G++ E + G+ P
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 1014 ISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQ 1073
+S + ++ + +DE RLP P D ++ ++ + C ++ ++RP +++
Sbjct: 254 MS-----NQDVIKAVDEGY--RLPPPM----DCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
Query: 1074 LL 1075
+L
Sbjct: 303 IL 304
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A E SG VAVK L + ++ NEV + + +H N+V+ Y
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMD---LRKQQRRELLFNEVVIMRDYQHFNVVEMYK 109
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
+++ E+L+ G+L I+S EE Q V + V AL+YLH +
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIVSQVRLNEE----QIATVCEAVLQALAYLHAQ---GV 162
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
++RDI S ++LL L+ +SDFG + D L GT ++APE+ +
Sbjct: 163 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEV 222
Query: 993 DVYSFGVLALEAIKGKHP 1010
D++S G++ +E + G+ P
Sbjct: 223 DIWSLGIMVIEMVDGEPP 240
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 73/272 (26%), Positives = 129/272 (47%), Gaps = 33/272 (12%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG+G G V+ + + VA+K +SE ++F+ E + + ++ H +V+ YG
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE----EDFIEEAEVMMKLSHPKLVQLYGV 73
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNAT---SAEELGWTQRMNVIKGVADALSYLHNDCFP 930
C +V+E++E G L+ L +AE L + + V + ++YL C
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC-- 126
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMK 987
+++RD++++N L+ VSDFG+++ + D +T GT + + +PE+ +
Sbjct: 127 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 183
Query: 988 VTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDK 1046
+ KSDV+SFGVL E +GK P + SN + D RL P R
Sbjct: 184 YSSKSDVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDISTGFRLYKP----RLA 232
Query: 1047 LISIMEVAISCLDENPDSRPTMQK-VSQLLKI 1077
+ ++ C E P+ RP + + QL +I
Sbjct: 233 STHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf
12058
Length = 285
Score = 85.5 bits (210), Expect = 2e-16, Method: Composition-based stats.
Identities = 72/273 (26%), Positives = 130/273 (47%), Gaps = 26/273 (9%)
Query: 811 EHCIGTGGQGSVYRAELS---SGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
E IG G G V L EI VA+K + + +++FL+E + + H N
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ--RRDFLSEASIMGQFDHPN 70
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
I+ G + + I+ EY+E GSL L Q + +++G+ + YL +
Sbjct: 71 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG--RFTVIQLVGMLRGIGSGMKYLSD 128
Query: 927 DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPD-SSNWTELAGTIG--YVAPELA 983
+ V+RD++++N+L++ VSDFG+S+ L+ D + +T G I + APE
Sbjct: 129 MSY---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 185
Query: 984 YTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
K T SDV+S+G++ E + G+ P +S + ++ + ++E RLP P
Sbjct: 186 AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS-----NQDVIKAIEE--GYRLPPP--- 235
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
D I++ ++ + C + RP ++ +L
Sbjct: 236 -MDCPIALHQLMLDCWQKERSDRPKFGQIVNML 267
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 85.5 bits (210), Expect = 2e-16, Method: Composition-based stats.
Identities = 72/273 (26%), Positives = 130/273 (47%), Gaps = 26/273 (9%)
Query: 811 EHCIGTGGQGSVYRAELS---SGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
E IG G G V L EI VA+K + + +++FL+E + + H N
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ--RRDFLSEASIMGQFDHPN 76
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
I+ G + + I+ EY+E GSL L Q + +++G+ + YL +
Sbjct: 77 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG--RFTVIQLVGMLRGIGSGMKYLSD 134
Query: 927 DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPD-SSNWTELAGTIG--YVAPELA 983
+ V+RD++++N+L++ VSDFG+S+ L+ D + +T G I + APE
Sbjct: 135 MSY---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 191
Query: 984 YTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
K T SDV+S+G++ E + G+ P +S + ++ + ++E RLP P
Sbjct: 192 AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS-----NQDVIKAIEE--GYRLPPP--- 241
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
D I++ ++ + C + RP ++ +L
Sbjct: 242 -MDCPIALHQLMLDCWQKERSDRPKFGQIVNML 273
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 85.1 bits (209), Expect = 2e-16, Method: Composition-based stats.
Identities = 78/304 (25%), Positives = 140/304 (46%), Gaps = 35/304 (11%)
Query: 789 VLTFDRKIAYEEIVRATNDFDEE---------HCIGTGGQGSVYRAELS---SGEI-VAV 835
V TF +E+ +A +F +E IG G G V L EI VA+
Sbjct: 3 VRTFVDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAI 62
Query: 836 KKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMI 895
K + + +++FL+E + + H NI+ G + + I+ EY+E GSL
Sbjct: 63 KTLKAGYTDKQ--RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF 120
Query: 896 LSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDF 955
L Q + +++G+ + YL + V+RD++++N+L++ VSDF
Sbjct: 121 LRKNDG--RFTVIQLVGMLRGIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDF 175
Query: 956 GISKSLKPD-SSNWTELAGTIG--YVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPR 1011
G+S+ L+ D + +T G I + APE K T SDV+S+G++ E + G+ P
Sbjct: 176 GMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 235
Query: 1012 DFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
+S + ++ + ++E RLP P D I++ ++ + C + RP ++
Sbjct: 236 WDMS-----NQDVIKAIEE--GYRLPPP----MDCPIALHQLMLDCWQKERSDRPKFGQI 284
Query: 1072 SQLL 1075
+L
Sbjct: 285 VNML 288
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 84.7 bits (208), Expect = 2e-16, Method: Composition-based stats.
Identities = 75/281 (26%), Positives = 132/281 (46%), Gaps = 40/281 (14%)
Query: 811 EHCIGTGGQGSVYRAELS---SGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
E IG G G V L EI VA+K S + +++FL+E + + H N
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ--RRDFLSEASIMGQFDHPN 95
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
++ G + + I+ E++E GSL L + Q + +++G+A + YL +
Sbjct: 96 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLAD 153
Query: 927 DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT---ELAGTIG--YVAPE 981
+ V+RD++++N+L++ VSDFG+S+ L+ D+S+ T L G I + APE
Sbjct: 154 MNY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 210
Query: 982 LAYTMKVTEKSDVYSFGVLALEAIK-GKHP------RDFISSICSTSSNLDRTLDEILDP 1034
K T SDV+S+G++ E + G+ P +D I++I D
Sbjct: 211 AIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ-------------DY 257
Query: 1035 RLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
RLP P D ++ ++ + C ++ + RP ++ L
Sbjct: 258 RLPPP----MDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 294
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 84.7 bits (208), Expect = 2e-16, Method: Composition-based stats.
Identities = 83/301 (27%), Positives = 138/301 (45%), Gaps = 38/301 (12%)
Query: 796 IAYEEIVRATNDFDEEHC-----IGTGGQGSVYRAEL-----SSGEIVAVKKFHSPLLSE 845
+A+E+ R F+E H +G G GSV ++GE+VAVKK
Sbjct: 3 MAFED--RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 60
Query: 846 MTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNATSAE 903
+ ++F E++ L ++H NIVK+ G C A R+ ++ EYL GSL L E
Sbjct: 61 L---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKE 115
Query: 904 ELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKP 963
+ + + + + YL + ++RD++++N+L++ E + DFG++K L
Sbjct: 116 RIDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQ 172
Query: 964 DSSNWT---ELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAI----KGKH-PRDFIS 1015
D I + APE K + SDV+SFGV+ E K K P +F+
Sbjct: 173 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMR 232
Query: 1016 SICSTSSN--LDRTLDEIL--DPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
I + + L E+L + RLP P D++ IM C + N + RP+ + +
Sbjct: 233 MIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDL 288
Query: 1072 S 1072
+
Sbjct: 289 A 289
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 84.7 bits (208), Expect = 3e-16, Method: Composition-based stats.
Identities = 83/301 (27%), Positives = 138/301 (45%), Gaps = 38/301 (12%)
Query: 796 IAYEEIVRATNDFDEEHC-----IGTGGQGSVYRAEL-----SSGEIVAVKKFHSPLLSE 845
+A+E+ R F+E H +G G GSV ++GE+VAVKK
Sbjct: 1 MAFED--RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 58
Query: 846 MTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNATSAE 903
+ ++F E++ L ++H NIVK+ G C A R+ ++ EYL GSL L E
Sbjct: 59 L---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKE 113
Query: 904 ELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKP 963
+ + + + + YL + ++RD++++N+L++ E + DFG++K L
Sbjct: 114 RIDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQ 170
Query: 964 DSSNWT---ELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAI----KGKH-PRDFIS 1015
D I + APE K + SDV+SFGV+ E K K P +F+
Sbjct: 171 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMR 230
Query: 1016 SICSTSSN--LDRTLDEIL--DPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
I + + L E+L + RLP P D++ IM C + N + RP+ + +
Sbjct: 231 MIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDL 286
Query: 1072 S 1072
+
Sbjct: 287 A 287
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 84.3 bits (207), Expect = 3e-16, Method: Composition-based stats.
Identities = 73/272 (26%), Positives = 126/272 (46%), Gaps = 36/272 (13%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G V+ + VA+K +S + FL E + + ++RH +V+ Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S +IV EY+ GSL L T + L Q +++ +A ++Y+ + V
Sbjct: 79 VSE-EPIYIVTEYMNKGSLLDFLKGET-GKYLRLPQLVDMSAQIASGMAYVERMNY---V 133
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD+ + N+L+ V+DFG+++ + + + WT G I + APE A + T
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 991 KSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP-----RLPAPSCNIR 1044
KSDV+SFG+L E KG+ P ++R E+LD R+P P
Sbjct: 192 KSDVWSFGILLTELTTKGRVP---------YPGMVNR---EVLDQVERGYRMPCPP---- 235
Query: 1045 DKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
+ S+ ++ C + P+ RPT + + L+
Sbjct: 236 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 84.3 bits (207), Expect = 3e-16, Method: Composition-based stats.
Identities = 73/272 (26%), Positives = 128/272 (47%), Gaps = 33/272 (12%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG+G G V+ + + VA+K +SE +F+ E + + ++ H +V+ YG
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE----DDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNAT---SAEELGWTQRMNVIKGVADALSYLHNDCFP 930
C +V+E++E G L+ L +AE L + + V + ++YL C
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC-- 143
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMK 987
+++RD++++N L+ VSDFG+++ + D +T GT + + +PE+ +
Sbjct: 144 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 200
Query: 988 VTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDK 1046
+ KSDV+SFGVL E +GK P + SN + D RL P R
Sbjct: 201 YSSKSDVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDISTGFRLYKP----RLA 249
Query: 1047 LISIMEVAISCLDENPDSRPTMQK-VSQLLKI 1077
+ ++ C E P+ RP + + QL +I
Sbjct: 250 STHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 281
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 128/270 (47%), Gaps = 34/270 (12%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG+G G+VY+ + V + +P ++ Q F NEV L + RH NI+ F G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 72
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S A IV ++ E SL L + E+ + +++ + A + YLH I+
Sbjct: 73 -STAPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---II 126
Query: 934 YRDISSKNVLLDLEYEAHVSDFGIS--KSLKPDSSNWTELAGTIGYVAPELAYTMKVTEK 991
+RD+ S N+ L + + DFG++ KS S + +L+G+I ++APE+ +++ +K
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 183
Query: 992 ------SDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEI----LDPRLPAPSC 1041
SDVY+FG++ E + G+ P S +N D+ + + L P L
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLP-------YSNINNRDQIIFMVGRGYLSPDLSKVRS 236
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
N + +M CL + D RP ++
Sbjct: 237 NCPKAMKRLMA---ECLKKKRDERPLFPQI 263
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 84.3 bits (207), Expect = 3e-16, Method: Composition-based stats.
Identities = 83/300 (27%), Positives = 137/300 (45%), Gaps = 38/300 (12%)
Query: 797 AYEEIVRATNDFDEEHC-----IGTGGQGSVYRAEL-----SSGEIVAVKKFHSPLLSEM 846
A+E+ R F+E H +G G GSV ++GE+VAVKK +
Sbjct: 3 AFED--RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL 60
Query: 847 TCQQEFLNEVKSLTEIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNATSAEE 904
++F E++ L ++H NIVK+ G C A R+ ++ EYL GSL L E
Sbjct: 61 ---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKER 115
Query: 905 LGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPD 964
+ + + + + YL + ++RD++++N+L++ E + DFG++K L D
Sbjct: 116 IDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQD 172
Query: 965 SSNWT---ELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAI----KGKH-PRDFISS 1016
I + APE K + SDV+SFGV+ E K K P +F+
Sbjct: 173 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 232
Query: 1017 ICSTSSN--LDRTLDEIL--DPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVS 1072
I + + L E+L + RLP P D++ IM C + N + RP+ + ++
Sbjct: 233 IGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 288
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 84.0 bits (206), Expect = 4e-16, Method: Composition-based stats.
Identities = 83/300 (27%), Positives = 137/300 (45%), Gaps = 38/300 (12%)
Query: 797 AYEEIVRATNDFDEEHC-----IGTGGQGSVYRAEL-----SSGEIVAVKKFHSPLLSEM 846
A+E+ R F+E H +G G GSV ++GE+VAVKK +
Sbjct: 29 AFED--RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL 86
Query: 847 TCQQEFLNEVKSLTEIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNATSAEE 904
++F E++ L ++H NIVK+ G C A R+ ++ EYL GSL L E
Sbjct: 87 ---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKER 141
Query: 905 LGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPD 964
+ + + + + YL + ++RD++++N+L++ E + DFG++K L D
Sbjct: 142 IDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQD 198
Query: 965 SSNWT---ELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAI----KGKH-PRDFISS 1016
I + APE K + SDV+SFGV+ E K K P +F+
Sbjct: 199 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 258
Query: 1017 ICSTSSN--LDRTLDEIL--DPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVS 1072
I + + L E+L + RLP P D++ IM C + N + RP+ + ++
Sbjct: 259 IGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 314
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 84.0 bits (206), Expect = 4e-16, Method: Composition-based stats.
Identities = 80/290 (27%), Positives = 132/290 (45%), Gaps = 50/290 (17%)
Query: 814 IGTGGQGSVYRAELSS------GEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
+G G G V+ AE + +VAVK + + +Q+F E + LT ++H++I
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE---ASESARQDFQREAELLTMLQHQHI 82
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSLAMIL-SNATSAE-----------ELGWTQRMNVIK 915
V+F+G C+ R +V+EY+ G L L S+ A+ LG Q + V
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-- 973
VA + YL F V+RD++++N L+ + DFG+S+ + S+++ + G
Sbjct: 143 QVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--STDYYRVGGRT 197
Query: 974 --TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSI----CSTSSNLDR 1026
I ++ PE K T +SDV+SFGV+ E GK P +S+ C T
Sbjct: 198 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGR--- 254
Query: 1027 TLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
E+ PR P ++ +IM C P R +++ V L+
Sbjct: 255 ---ELERPRACPP------EVYAIMR---GCWQREPQQRHSIKDVHARLQ 292
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 84.0 bits (206), Expect = 4e-16, Method: Composition-based stats.
Identities = 80/290 (27%), Positives = 132/290 (45%), Gaps = 50/290 (17%)
Query: 814 IGTGGQGSVYRAELSS------GEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
+G G G V+ AE + +VAVK + + +Q+F E + LT ++H++I
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE---ASESARQDFQREAELLTMLQHQHI 76
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSLAMIL-SNATSAE-----------ELGWTQRMNVIK 915
V+F+G C+ R +V+EY+ G L L S+ A+ LG Q + V
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-- 973
VA + YL F V+RD++++N L+ + DFG+S+ + S+++ + G
Sbjct: 137 QVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--STDYYRVGGRT 191
Query: 974 --TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSI----CSTSSNLDR 1026
I ++ PE K T +SDV+SFGV+ E GK P +S+ C T
Sbjct: 192 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGR--- 248
Query: 1027 TLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
E+ PR P ++ +IM C P R +++ V L+
Sbjct: 249 ---ELERPRACPP------EVYAIMR---GCWQREPQQRHSIKDVHARLQ 286
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 84.0 bits (206), Expect = 4e-16, Method: Composition-based stats.
Identities = 80/290 (27%), Positives = 132/290 (45%), Gaps = 50/290 (17%)
Query: 814 IGTGGQGSVYRAELSS------GEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
+G G G V+ AE + +VAVK + + +Q+F E + LT ++H++I
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE---ASESARQDFQREAELLTMLQHQHI 105
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSLAMIL-SNATSAE-----------ELGWTQRMNVIK 915
V+F+G C+ R +V+EY+ G L L S+ A+ LG Q + V
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-- 973
VA + YL F V+RD++++N L+ + DFG+S+ + S+++ + G
Sbjct: 166 QVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--STDYYRVGGRT 220
Query: 974 --TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSI----CSTSSNLDR 1026
I ++ PE K T +SDV+SFGV+ E GK P +S+ C T
Sbjct: 221 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGR--- 277
Query: 1027 TLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
E+ PR P ++ +IM C P R +++ V L+
Sbjct: 278 ---ELERPRACPP------EVYAIMR---GCWQREPQQRHSIKDVHARLQ 315
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 84.0 bits (206), Expect = 4e-16, Method: Composition-based stats.
Identities = 83/300 (27%), Positives = 137/300 (45%), Gaps = 38/300 (12%)
Query: 797 AYEEIVRATNDFDEEHC-----IGTGGQGSVYRAEL-----SSGEIVAVKKFHSPLLSEM 846
A+E+ R F+E H +G G GSV ++GE+VAVKK +
Sbjct: 5 AFED--RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL 62
Query: 847 TCQQEFLNEVKSLTEIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNATSAEE 904
++F E++ L ++H NIVK+ G C A R+ ++ EYL GSL L E
Sbjct: 63 ---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKER 117
Query: 905 LGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPD 964
+ + + + + YL + ++RD++++N+L++ E + DFG++K L D
Sbjct: 118 IDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQD 174
Query: 965 SSNWT---ELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAI----KGKH-PRDFISS 1016
I + APE K + SDV+SFGV+ E K K P +F+
Sbjct: 175 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 234
Query: 1017 ICSTSSN--LDRTLDEIL--DPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVS 1072
I + + L E+L + RLP P D++ IM C + N + RP+ + ++
Sbjct: 235 IGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 290
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor
Length = 301
Score = 84.0 bits (206), Expect = 4e-16, Method: Composition-based stats.
Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 36/295 (12%)
Query: 802 VRATNDFDEEHC-----IGTGGQGSVYRAEL-----SSGEIVAVKKFHSPLLSEMTCQQE 851
+R F+E H +G G GSV ++GE+VAVKK + ++
Sbjct: 1 MRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RD 57
Query: 852 FLNEVKSLTEIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNATSAEELGWTQ 909
F E++ L ++H NIVK+ G C A R+ ++ EYL GSL L E + +
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIK 115
Query: 910 RMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT 969
+ + + YL + ++RD++++N+L++ E + DFG++K L D
Sbjct: 116 LLQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 172
Query: 970 ---ELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAI----KGKH-PRDFISSICSTS 1021
I + APE K + SDV+SFGV+ E K K P +F+ I +
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 232
Query: 1022 SN--LDRTLDEIL--DPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVS 1072
+ L E+L + RLP P D++ IM C + N + RP+ + ++
Sbjct: 233 QGQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 283
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 129/270 (47%), Gaps = 34/270 (12%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG+G G+VY+ + V + +P ++ Q F NEV L + RH NI+ F G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 72
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
+ + + IV ++ E SL L + E+ + +++ + A + YLH I+
Sbjct: 73 STKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---II 126
Query: 934 YRDISSKNVLLDLEYEAHVSDFGIS--KSLKPDSSNWTELAGTIGYVAPELAYTMKVTEK 991
+RD+ S N+ L + + DFG++ KS S + +L+G+I ++APE+ +++ +K
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 183
Query: 992 ------SDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEI----LDPRLPAPSC 1041
SDVY+FG++ E + G+ P S +N D+ + + L P L
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLP-------YSNINNRDQIIFMVGRGYLSPDLSKVRS 236
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
N + +M CL + D RP ++
Sbjct: 237 NCPKAMKRLMA---ECLKKKRDERPLFPQI 263
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 84.0 bits (206), Expect = 4e-16, Method: Composition-based stats.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 29/218 (13%)
Query: 814 IGTGGQGSVYRAEL------SSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
+G G G V+ AE +VAVK + +++F E + LT ++H +I
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD---ASDNARKDFHREAELLTNLQHEHI 77
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSL----------AMILSNATSAEELGWTQRMNVIKGV 917
VKFYG C +V+EY++ G L A++++ EL +Q +++ + +
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 918 ADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG---- 973
A + YL + F V+RD++++N L+ + DFG+S+ + S+++ + G
Sbjct: 138 AAGMVYLASQHF---VHRDLATRNCLVGENLLVKIGDFGMSRDVY--STDYYRVGGHTML 192
Query: 974 TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHP 1010
I ++ PE K T +SDV+S GV+ E GK P
Sbjct: 193 PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 129/270 (47%), Gaps = 34/270 (12%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG+G G+VY+ + V + +P ++ Q F NEV L + RH NI+ F G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 72
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
+ + + IV ++ E SL L + E+ + +++ + A + YLH I+
Sbjct: 73 STKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---II 126
Query: 934 YRDISSKNVLLDLEYEAHVSDFGIS--KSLKPDSSNWTELAGTIGYVAPELAYTMKVTEK 991
+RD+ S N+ L + + DFG++ KS S + +L+G+I ++APE+ +++ +K
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 183
Query: 992 ------SDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEI----LDPRLPAPSC 1041
SDVY+FG++ E + G+ P S +N D+ + + L P L
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLP-------YSNINNRDQIIFMVGRGYLSPDLSKVRS 236
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
N + +M CL + D RP ++
Sbjct: 237 NCPKAMKRLMA---ECLKKKRDERPLFPQI 263
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene
Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene
Inhibitor
Length = 282
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 129/270 (47%), Gaps = 34/270 (12%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG+G G+VY+ + V + +P ++ Q F NEV L + RH NI+ F G+
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 74
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
+ + + IV ++ E SL L + E+ + +++ + A + YLH I+
Sbjct: 75 STKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---II 128
Query: 934 YRDISSKNVLLDLEYEAHVSDFGIS--KSLKPDSSNWTELAGTIGYVAPELAYTMKVTEK 991
+RD+ S N+ L + + DFG++ KS S + +L+G+I ++APE+ +++ +K
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 185
Query: 992 ------SDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEI----LDPRLPAPSC 1041
SDVY+FG++ E + G+ P S +N D+ + + L P L
Sbjct: 186 NPYSFQSDVYAFGIVLYELMTGQLP-------YSNINNRDQIIFMVGRGYLSPDLSKVRS 238
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
N + +M CL + D RP ++
Sbjct: 239 NCPKAMKRLMA---ECLKKKRDERPLFPQI 265
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 129/270 (47%), Gaps = 34/270 (12%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG+G G+VY+ + V + +P ++ Q F NEV L + RH NI+ F G+
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 77
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
+ + + IV ++ E SL L + E+ + +++ + A + YLH I+
Sbjct: 78 STKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---II 131
Query: 934 YRDISSKNVLLDLEYEAHVSDFGIS--KSLKPDSSNWTELAGTIGYVAPELAYTMKVTEK 991
+RD+ S N+ L + + DFG++ KS S + +L+G+I ++APE+ +++ +K
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 188
Query: 992 ------SDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEI----LDPRLPAPSC 1041
SDVY+FG++ E + G+ P S +N D+ + + L P L
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLP-------YSNINNRDQIIFMVGRGYLSPDLSKVRS 241
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
N + +M CL + D RP ++
Sbjct: 242 NCPKAMKRLMA---ECLKKKRDERPLFPQI 268
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A
[1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With A
[1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 129/270 (47%), Gaps = 34/270 (12%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG+G G+VY+ + V + +P ++ Q F NEV L + RH NI+ F G+
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 77
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
+ + + IV ++ E SL L + E+ + +++ + A + YLH I+
Sbjct: 78 STKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---II 131
Query: 934 YRDISSKNVLLDLEYEAHVSDFGIS--KSLKPDSSNWTELAGTIGYVAPELAYTMKVTEK 991
+RD+ S N+ L + + DFG++ KS S + +L+G+I ++APE+ +++ +K
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 188
Query: 992 ------SDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEI----LDPRLPAPSC 1041
SDVY+FG++ E + G+ P S +N D+ + + L P L
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLP-------YSNINNRDQIIFMVGRGYLSPDLSKVRS 241
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
N + +M CL + D RP ++
Sbjct: 242 NCPKAMKRLMA---ECLKKKRDERPLFPQI 268
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 83.6 bits (205), Expect = 5e-16, Method: Composition-based stats.
Identities = 81/294 (27%), Positives = 133/294 (45%), Gaps = 36/294 (12%)
Query: 803 RATNDFDEEHC-----IGTGGQGSVYRAEL-----SSGEIVAVKKFHSPLLSEMTCQQEF 852
R F+E H +G G GSV ++GE+VAVKK + ++F
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 61
Query: 853 LNEVKSLTEIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNATSAEELGWTQR 910
E++ L ++H NIVK+ G C A R+ ++ EYL GSL L E + +
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKL 119
Query: 911 MNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT- 969
+ + + YL + ++RD++++N+L++ E + DFG++K L D
Sbjct: 120 LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 970 --ELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAI----KGKH-PRDFISSICSTSS 1022
I + APE K + SDV+SFGV+ E K K P +F+ I +
Sbjct: 177 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 236
Query: 1023 N--LDRTLDEIL--DPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVS 1072
+ L E+L + RLP P D++ IM C + N + RP+ + ++
Sbjct: 237 GQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 286
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 83.6 bits (205), Expect = 5e-16, Method: Composition-based stats.
Identities = 81/294 (27%), Positives = 133/294 (45%), Gaps = 36/294 (12%)
Query: 803 RATNDFDEEHC-----IGTGGQGSVYRAEL-----SSGEIVAVKKFHSPLLSEMTCQQEF 852
R F+E H +G G GSV ++GE+VAVKK + ++F
Sbjct: 1 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 57
Query: 853 LNEVKSLTEIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNATSAEELGWTQR 910
E++ L ++H NIVK+ G C A R+ ++ EYL GSL L E + +
Sbjct: 58 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKL 115
Query: 911 MNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT- 969
+ + + YL + ++RD++++N+L++ E + DFG++K L D
Sbjct: 116 LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 172
Query: 970 --ELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAI----KGKH-PRDFISSICSTSS 1022
I + APE K + SDV+SFGV+ E K K P +F+ I +
Sbjct: 173 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 232
Query: 1023 N--LDRTLDEIL--DPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVS 1072
+ L E+L + RLP P D++ IM C + N + RP+ + ++
Sbjct: 233 GQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 282
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With
Imidazo[1,5-A]quinoxaline
Length = 267
Score = 83.6 bits (205), Expect = 5e-16, Method: Composition-based stats.
Identities = 73/272 (26%), Positives = 128/272 (47%), Gaps = 33/272 (12%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG+G G V+ + + VA+K +SE ++F+ E + + ++ H +V+ YG
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE----EDFIEEAEVMMKLSHPKLVQLYGV 71
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNAT---SAEELGWTQRMNVIKGVADALSYLHNDCFP 930
C +V E++E G L+ L +AE L + + V + ++YL C
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC-- 124
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMK 987
+++RD++++N L+ VSDFG+++ + D +T GT + + +PE+ +
Sbjct: 125 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 181
Query: 988 VTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDK 1046
+ KSDV+SFGVL E +GK P + SN + D RL P R
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDISTGFRLYKP----RLA 230
Query: 1047 LISIMEVAISCLDENPDSRPTMQK-VSQLLKI 1077
+ ++ C E P+ RP + + QL +I
Sbjct: 231 STHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,6-Difluorophenyl)-1h-1,
2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 83.2 bits (204), Expect = 7e-16, Method: Composition-based stats.
Identities = 70/211 (33%), Positives = 108/211 (51%), Gaps = 19/211 (9%)
Query: 807 DFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQ-QEFLNEVKSLTEIRH 864
D +H +G G G VY + VAVK L E T + +EFL E + EI+H
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 87
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
N+V+ G C+ +IV EY+ G+L L + EE+ + + ++ A+ YL
Sbjct: 88 PNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLREC-NREEVTAVVLLYMATQISSAMEYL 146
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPE 981
F ++RD++++N L+ + V+DFG+S+ + D+ +T AG I + APE
Sbjct: 147 EKKNF---IHRDLAARNCLVGENHVVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 201
Query: 982 -LAYTMKVTEKSDVYSFGVLALE-AIKGKHP 1010
LAY + KSDV++FGVL E A G P
Sbjct: 202 SLAYN-TFSIKSDVWAFGVLLWEIATYGMSP 231
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 127/265 (47%), Gaps = 34/265 (12%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG+G G+VY+ + V + +P ++ Q F NEV L + RH NI+ F G+
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 92
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
+ + + IV ++ E SL L + E+ + +++ + A + YLH I+
Sbjct: 93 STKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---II 146
Query: 934 YRDISSKNVLLDLEYEAHVSDFGIS--KSLKPDSSNWTELAGTIGYVAPELAYTMKVTEK 991
+RD+ S N+ L + + DFG++ KS S + +L+G+I ++APE+ +++ +K
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 203
Query: 992 ------SDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEI----LDPRLPAPSC 1041
SDVY+FG++ E + G+ P S +N D+ + + L P L
Sbjct: 204 NPYSFQSDVYAFGIVLYELMTGQLP-------YSNINNRDQIIFMVGRGYLSPDLSKVRS 256
Query: 1042 NIRDKLISIMEVAISCLDENPDSRP 1066
N + +M CL + D RP
Sbjct: 257 NCPKAMKRLMA---ECLKKKRDERP 278
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 83.2 bits (204), Expect = 7e-16, Method: Composition-based stats.
Identities = 82/300 (27%), Positives = 137/300 (45%), Gaps = 38/300 (12%)
Query: 797 AYEEIVRATNDFDEEHC-----IGTGGQGSVYRAEL-----SSGEIVAVKKFHSPLLSEM 846
A+E+ R F+E H +G G GSV ++GE+VAVKK +
Sbjct: 1 AFED--RDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL 58
Query: 847 TCQQEFLNEVKSLTEIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNATSAEE 904
++F E++ L ++H NIVK+ G C A R+ ++ E+L GSL L E
Sbjct: 59 ---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQK--HKER 113
Query: 905 LGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPD 964
+ + + + + YL + ++RD++++N+L++ E + DFG++K L D
Sbjct: 114 IDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQD 170
Query: 965 SSNWT---ELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAI----KGKH-PRDFISS 1016
I + APE K + SDV+SFGV+ E K K P +F+
Sbjct: 171 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 230
Query: 1017 ICSTSSN--LDRTLDEIL--DPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVS 1072
I + + L E+L + RLP P D++ IM C + N + RP+ + ++
Sbjct: 231 IGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 286
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor
Nvp-Bbt594
Length = 295
Score = 82.8 bits (203), Expect = 8e-16, Method: Composition-based stats.
Identities = 80/289 (27%), Positives = 133/289 (46%), Gaps = 36/289 (12%)
Query: 808 FDEEHC-----IGTGGQGSVYRAEL-----SSGEIVAVKKFHSPLLSEMTCQQEFLNEVK 857
F+E H +G G GSV ++GE+VAVKK + ++F E++
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIE 63
Query: 858 SLTEIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
L ++H NIVK+ G C A R+ ++ EYL GSL L E + + +
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTS 121
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT---ELA 972
+ + YL + ++RD++++N+L++ E + DFG++K L D +
Sbjct: 122 QICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGE 178
Query: 973 GTIGYVAPELAYTMKVTEKSDVYSFGVLALEAI----KGKH-PRDFISSICSTSSN--LD 1025
I + APE K + SDV+SFGV+ E K K P +F+ I + +
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 238
Query: 1026 RTLDEIL--DPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVS 1072
L E+L + RLP P D++ IM C + N + RP+ + ++
Sbjct: 239 FHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 283
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 127/265 (47%), Gaps = 34/265 (12%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG+G G+VY+ + V + +P ++ Q F NEV L + RH NI+ F G+
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 99
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
+ + + IV ++ E SL L + E+ + +++ + A + YLH I+
Sbjct: 100 STKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---II 153
Query: 934 YRDISSKNVLLDLEYEAHVSDFGIS--KSLKPDSSNWTELAGTIGYVAPELAYTMKVTEK 991
+RD+ S N+ L + + DFG++ KS S + +L+G+I ++APE+ +++ +K
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 210
Query: 992 ------SDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEI----LDPRLPAPSC 1041
SDVY+FG++ E + G+ P S +N D+ + + L P L
Sbjct: 211 NPYSFQSDVYAFGIVLYELMTGQLP-------YSNINNRDQIIFMVGRGYLSPDLSKVRS 263
Query: 1042 NIRDKLISIMEVAISCLDENPDSRP 1066
N + +M CL + D RP
Sbjct: 264 NCPKAMKRLMA---ECLKKKRDERP 285
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime Furopyridine
Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime Furopyridine
Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In Complex
With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In Complex
With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 127/265 (47%), Gaps = 34/265 (12%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG+G G+VY+ + V + +P ++ Q F NEV L + RH NI+ F G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 100
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
+ + + IV ++ E SL L + E+ + +++ + A + YLH I+
Sbjct: 101 STKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---II 154
Query: 934 YRDISSKNVLLDLEYEAHVSDFGIS--KSLKPDSSNWTELAGTIGYVAPELAYTMKVTEK 991
+RD+ S N+ L + + DFG++ KS S + +L+G+I ++APE+ +++ +K
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 211
Query: 992 ------SDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEI----LDPRLPAPSC 1041
SDVY+FG++ E + G+ P S +N D+ + + L P L
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLP-------YSNINNRDQIIFMVGRGYLSPDLSKVRS 264
Query: 1042 NIRDKLISIMEVAISCLDENPDSRP 1066
N + +M CL + D RP
Sbjct: 265 NCPKAMKRLMA---ECLKKKRDERP 286
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 82.8 bits (203), Expect = 9e-16, Method: Composition-based stats.
Identities = 80/294 (27%), Positives = 134/294 (45%), Gaps = 36/294 (12%)
Query: 803 RATNDFDEEHC-----IGTGGQGSVYRAEL-----SSGEIVAVKKFHSPLLSEMTCQQEF 852
R F+E H +G G GSV ++GE+VAVKK + ++F
Sbjct: 3 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 59
Query: 853 LNEVKSLTEIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNATSAEELGWTQR 910
E++ L ++H NIVK+ G C A R+ ++ EYL GSL L E + +
Sbjct: 60 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKL 117
Query: 911 MNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT- 969
+ + + YL + ++R+++++N+L++ E + DFG++K L D +
Sbjct: 118 LQYTSQICKGMEYLGTKRY---IHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKV 174
Query: 970 --ELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAI----KGKH-PRDFISSICSTSS 1022
I + APE K + SDV+SFGV+ E K K P +F+ I +
Sbjct: 175 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 234
Query: 1023 N--LDRTLDEIL--DPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVS 1072
+ L E+L + RLP P D++ IM C + N + RP+ + ++
Sbjct: 235 GQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 284
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 82.8 bits (203), Expect = 1e-15, Method: Composition-based stats.
Identities = 80/289 (27%), Positives = 132/289 (45%), Gaps = 36/289 (12%)
Query: 808 FDEEHC-----IGTGGQGSVYRAEL-----SSGEIVAVKKFHSPLLSEMTCQQEFLNEVK 857
F+E H +G G GSV ++GE+VAVKK + ++F E++
Sbjct: 5 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIE 61
Query: 858 SLTEIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
L ++H NIVK+ G C A R+ ++ EYL GSL L E + + +
Sbjct: 62 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTS 119
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT---ELA 972
+ + YL + ++RD++++N+L++ E + DFG++K L D
Sbjct: 120 QICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 176
Query: 973 GTIGYVAPELAYTMKVTEKSDVYSFGVLALEAI----KGKH-PRDFISSICSTSSN--LD 1025
I + APE K + SDV+SFGV+ E K K P +F+ I + +
Sbjct: 177 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 236
Query: 1026 RTLDEIL--DPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVS 1072
L E+L + RLP P D++ IM C + N + RP+ + ++
Sbjct: 237 FHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 281
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 127/265 (47%), Gaps = 34/265 (12%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG+G G+VY+ + V + +P ++ Q F NEV L + RH NI+ F G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 100
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
+ + + IV ++ E SL L + E+ + +++ + A + YLH I+
Sbjct: 101 STKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---II 154
Query: 934 YRDISSKNVLLDLEYEAHVSDFGIS--KSLKPDSSNWTELAGTIGYVAPELAYTMKVTEK 991
+RD+ S N+ L + + DFG++ KS S + +L+G+I ++APE+ +++ +K
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 211
Query: 992 ------SDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEI----LDPRLPAPSC 1041
SDVY+FG++ E + G+ P S +N D+ + + L P L
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLP-------YSNINNRDQIIFMVGRGYLSPDLSKVRS 264
Query: 1042 NIRDKLISIMEVAISCLDENPDSRP 1066
N + +M CL + D RP
Sbjct: 265 NCPKAMKRLMA---ECLKKKRDERP 286
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 127/272 (46%), Gaps = 36/272 (13%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G V+ + VA+K +S + FL E + + ++RH +V+ Y
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAV 330
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S +IV EY+ GSL L T + L Q +++ +A ++Y+ + V
Sbjct: 331 VSE-EPIYIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNY---V 385
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD+ + N+L+ V+DFG+++ + + + +T G I + APE A + T
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 443
Query: 991 KSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP-----RLPAPSCNIR 1044
KSDV+SFG+L E KG+ P + ++R E+LD R+P P
Sbjct: 444 KSDVWSFGILLTELTTKGRVPYPGM---------VNR---EVLDQVERGYRMPCPP---- 487
Query: 1045 DKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
+ S+ ++ C + P+ RPT + + L+
Sbjct: 488 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl
Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl
Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 80/289 (27%), Positives = 132/289 (45%), Gaps = 36/289 (12%)
Query: 808 FDEEHC-----IGTGGQGSVYRAEL-----SSGEIVAVKKFHSPLLSEMTCQQEFLNEVK 857
F+E H +G G GSV ++GE+VAVKK + ++F E++
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIE 63
Query: 858 SLTEIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
L ++H NIVK+ G C A R+ ++ EYL GSL L E + + +
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTS 121
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT---ELA 972
+ + YL + ++RD++++N+L++ E + DFG++K L D
Sbjct: 122 QICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 178
Query: 973 GTIGYVAPELAYTMKVTEKSDVYSFGVLALEAI----KGKH-PRDFISSICSTSSN--LD 1025
I + APE K + SDV+SFGV+ E K K P +F+ I + +
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 238
Query: 1026 RTLDEIL--DPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVS 1072
L E+L + RLP P D++ IM C + N + RP+ + ++
Sbjct: 239 FHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 283
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 70/269 (26%), Positives = 126/269 (46%), Gaps = 32/269 (11%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG+G G V+ + + VA+K +SE ++F+ E + + ++ H +V+ YG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE----EDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNAT---SAEELGWTQRMNVIKGVADALSYLHNDCFP 930
C +V+E++E G L+ L +AE L + + V + ++YL
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEE---A 122
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMK 987
+++RD++++N L+ VSDFG+++ + D +T GT + + +PE+ +
Sbjct: 123 SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 180
Query: 988 VTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDK 1046
+ KSDV+SFGVL E +GK P + SN + D RL P R
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDISTGFRLYKP----RLA 229
Query: 1047 LISIMEVAISCLDENPDSRPTMQKVSQLL 1075
+ ++ C E P+ RP ++ + L
Sbjct: 230 STHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 80/289 (27%), Positives = 132/289 (45%), Gaps = 36/289 (12%)
Query: 808 FDEEHC-----IGTGGQGSVYRAEL-----SSGEIVAVKKFHSPLLSEMTCQQEFLNEVK 857
F+E H +G G GSV ++GE+VAVKK + ++F E++
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIE 81
Query: 858 SLTEIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
L ++H NIVK+ G C A R+ ++ EYL GSL L E + + +
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTS 139
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT---ELA 972
+ + YL + ++RD++++N+L++ E + DFG++K L D
Sbjct: 140 QICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 196
Query: 973 GTIGYVAPELAYTMKVTEKSDVYSFGVLALEAI----KGKH-PRDFISSICSTSSN--LD 1025
I + APE K + SDV+SFGV+ E K K P +F+ I + +
Sbjct: 197 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 256
Query: 1026 RTLDEIL--DPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVS 1072
L E+L + RLP P D++ IM C + N + RP+ + ++
Sbjct: 257 FHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 301
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 82.0 bits (201), Expect = 2e-15, Method: Composition-based stats.
Identities = 80/289 (27%), Positives = 132/289 (45%), Gaps = 36/289 (12%)
Query: 808 FDEEHC-----IGTGGQGSVYRAEL-----SSGEIVAVKKFHSPLLSEMTCQQEFLNEVK 857
F+E H +G G GSV ++GE+VAVKK + ++F E++
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIE 81
Query: 858 SLTEIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
L ++H NIVK+ G C A R+ ++ EYL GSL L E + + +
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTS 139
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT---ELA 972
+ + YL + ++RD++++N+L++ E + DFG++K L D
Sbjct: 140 QICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 196
Query: 973 GTIGYVAPELAYTMKVTEKSDVYSFGVLALEAI----KGKH-PRDFISSICSTSSN--LD 1025
I + APE K + SDV+SFGV+ E K K P +F+ I + +
Sbjct: 197 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 256
Query: 1026 RTLDEIL--DPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVS 1072
L E+L + RLP P D++ IM C + N + RP+ + ++
Sbjct: 257 FHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 301
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src, In
Complex With Amp-pnp
Length = 452
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 125/273 (45%), Gaps = 38/273 (13%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G V+ + VA+K +S + FL E + + ++RH +V+ Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S +IV EY+ GSL L T + L Q +++ +A ++Y+ + V
Sbjct: 248 VSE-EPIYIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNY---V 302
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD+ + N+L+ V+DFG+++ + + + +T G I + APE A + T
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 991 KSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP-----RLPA-PSCNI 1043
KSDV+SFG+L E KG+ P + + E+LD R+P P C
Sbjct: 361 KSDVWSFGILLTELTTKGRVPYPGMVN------------REVLDQVERGYRMPCPPECP- 407
Query: 1044 RDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
S+ ++ C + P+ RPT + + L+
Sbjct: 408 ----ESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 38/273 (13%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G V+ + VA+K +S + FL E + + ++RH +V+ Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S +IV EY+ GSL L T + L Q +++ +A ++Y+ + V
Sbjct: 248 VSE-EPIYIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNY---V 302
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD+ + N+L+ V+DFG+++ + + + +T G I + APE A + T
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 991 KSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP-----RLPA-PSCNI 1043
KSDV+SFG+L E KG+ P ++R E+LD R+P P C
Sbjct: 361 KSDVWSFGILLTELTTKGRVP---------YPGMVNR---EVLDQVERGYRMPCPPECP- 407
Query: 1044 RDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
S+ ++ C + P+ RPT + + L+
Sbjct: 408 ----ESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant)
In Complex With N6-Benzyl Adp
Length = 452
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 125/273 (45%), Gaps = 38/273 (13%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G V+ + VA+K +S + FL E + + ++RH +V+ Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S +IV EY+ GSL L T + L Q +++ +A ++Y+ + V
Sbjct: 248 VSE-EPIYIVGEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNY---V 302
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD+ + N+L+ V+DFG+++ + + + +T G I + APE A + T
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 991 KSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP-----RLPA-PSCNI 1043
KSDV+SFG+L E KG+ P + + E+LD R+P P C
Sbjct: 361 KSDVWSFGILLTELTTKGRVPYPGMVN------------REVLDQVERGYRMPCPPECP- 407
Query: 1044 RDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
S+ ++ C + P+ RPT + + L+
Sbjct: 408 ----ESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 72/272 (26%), Positives = 126/272 (46%), Gaps = 36/272 (13%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G V+ + VA+K +S + FL E + + ++RH +V+ Y
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAV 74
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S +IV EY+ GSL L T + L Q +++ +A ++Y+ + V
Sbjct: 75 VSE-EPIYIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNY---V 129
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD+ + N+L+ V+DFG+++ + + + +T G I + APE A + T
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 187
Query: 991 KSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP-----RLPAPSCNIR 1044
KSDV+SFG+L E KG+ P ++R E+LD R+P P
Sbjct: 188 KSDVWSFGILLTELTTKGRVP---------YPGMVNR---EVLDQVERGYRMPCPP---- 231
Query: 1045 DKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
+ S+ ++ C + P+ RPT + + L+
Sbjct: 232 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 263
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 81.3 bits (199), Expect = 3e-15, Method: Composition-based stats.
Identities = 74/281 (26%), Positives = 131/281 (46%), Gaps = 40/281 (14%)
Query: 811 EHCIGTGGQGSVYRAELS---SGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
E IG G G V L EI VA+K S + +++FL+E + + H N
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ--RRDFLSEASIMGQFDHPN 69
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
++ G + + I+ E++E GSL L + Q + +++G+A + YL +
Sbjct: 70 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLAD 127
Query: 927 DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT---ELAGTIG--YVAPE 981
+ V+R ++++N+L++ VSDFG+S+ L+ D+S+ T L G I + APE
Sbjct: 128 MNY---VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 184
Query: 982 LAYTMKVTEKSDVYSFGVLALEAIK-GKHP------RDFISSICSTSSNLDRTLDEILDP 1034
K T SDV+S+G++ E + G+ P +D I++I D
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ-------------DY 231
Query: 1035 RLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
RLP P D ++ ++ + C ++ + RP ++ L
Sbjct: 232 RLPPP----MDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 268
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
Length = 294
Score = 81.3 bits (199), Expect = 3e-15, Method: Composition-based stats.
Identities = 59/199 (29%), Positives = 97/199 (48%), Gaps = 8/199 (4%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G GG +VY AE + I VA+K P + + F EV + +++ H+NIV
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
++V EY+E +L+ + S L +N + D + + H+ I
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIE---SHGPLSVDTAINFTNQILDGIKHAHD---MRI 132
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT-ELAGTIGYVAPELAYTMKVTEK 991
V+RDI +N+L+D + DFGI+K+L S T + GT+ Y +PE A E
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDEC 192
Query: 992 SDVYSFGVLALEAIKGKHP 1010
+D+YS G++ E + G+ P
Sbjct: 193 TDIYSIGIVLYEMLVGEPP 211
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 75/293 (25%), Positives = 137/293 (46%), Gaps = 31/293 (10%)
Query: 798 YEEIVRATNDFDEE---------HCIGTGGQGSVY--RAELSSGEIVAVKKFHSPLLSEM 846
YE+ RA + F +E IG G G V R +L VAV +
Sbjct: 26 YEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTE 85
Query: 847 TCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELG 906
+++FL E + + H N+V G + + IV E++E G+L L +
Sbjct: 86 KQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDG--QFT 143
Query: 907 WTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPD-S 965
Q + +++G+A + YL + + V+RD++++N+L++ VSDFG+S+ ++ D
Sbjct: 144 VIQLVGMLRGIAAGMRYLADMGY---VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPE 200
Query: 966 SNWTELAGTIG--YVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSS 1022
+ +T G I + APE K T SDV+S+G++ E + G+ P +S +
Sbjct: 201 AVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS-----NQ 255
Query: 1023 NLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
++ + ++E RLPAP D + ++ + C + RP +++ +L
Sbjct: 256 DVIKAIEE--GYRLPAP----MDCPAGLHQLMLDCWQKERAERPKFEQIVGIL 302
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 72/272 (26%), Positives = 126/272 (46%), Gaps = 36/272 (13%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G V+ + VA+K +S + FL E + + ++RH +V+ Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S +IV EY+ GSL L T + L Q +++ +A ++Y+ + V
Sbjct: 79 VSE-EPIYIVTEYMNKGSLLDFLKGET-GKYLRLPQLVDMSAQIASGMAYVERMNY---V 133
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD+ + N+L+ V+DFG+++ + + + +T G I + APE A + T
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 991 KSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP-----RLPAPSCNIR 1044
KSDV+SFG+L E KG+ P ++R E+LD R+P P
Sbjct: 192 KSDVWSFGILLTELTTKGRVP---------YPGMVNR---EVLDQVERGYRMPCPP---- 235
Query: 1045 DKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
+ S+ ++ C + P+ RPT + + L+
Sbjct: 236 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Pyrazolopyrimidine 5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Pyrazolopyrimidine 5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Dasatinib
Length = 286
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 72/272 (26%), Positives = 126/272 (46%), Gaps = 36/272 (13%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G V+ + VA+K +S + FL E + + +IRH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKIRHEKLVQLYAV 81
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S +IV EY+ GSL L + L Q +++ +A ++Y+ + V
Sbjct: 82 VSE-EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD+ + N+L+ V+DFG+++ + + + +T G I + APE A + T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 991 KSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP-----RLPAPSCNIR 1044
KSDV+SFG+L E KG+ P ++R E+LD R+P P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP---------YPGMVNR---EVLDQVERGYRMPCPP---- 238
Query: 1045 DKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
+ S+ ++ C ++P+ RPT + + L+
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 121/273 (44%), Gaps = 34/273 (12%)
Query: 814 IGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V+ L + +VAVK L ++ + FL E + L + H NIV+ G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK--FLQEARILKQYSHPNIVRLIG 179
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
C+ + +IV E ++ G L T L + ++ A + YL + C
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLR--TEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-----TIGYVAPELAYTMK 987
++RD++++N L+ + +SDFG+S+ ++ +G + + APE +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSRE---EADGVXAASGGLRQVPVKWTAPEALNYGR 291
Query: 988 VTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDP--RLPAPS-CNI 1043
+ +SDV+SFG+L E G P +S ++ E ++ RLP P C
Sbjct: 292 YSSESDVWSFGILLWETFSLGASPYPNLS---------NQQTREFVEKGGRLPCPELCP- 341
Query: 1044 RDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
D + +ME C P RP+ + Q L+
Sbjct: 342 -DAVFRLME---QCWAYEPGQRPSFSTIYQELQ 370
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 21/265 (7%)
Query: 808 FDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
F + IG G G V++ + + ++VA+K L ++ E+ L++
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
+ K+YG +I+ EYL GS A+ L A +E Q ++K + L YLH+
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGS-ALDLLRAGPFDEF---QIATMLKEILKGLDYLHS 138
Query: 927 DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTM 986
+ ++RDI + NVLL + + ++DFG++ L GT ++APE+
Sbjct: 139 E---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQS 195
Query: 987 KVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDK 1046
K+D++S G+ A+E KG+ P + + R L L P+ P+ + D
Sbjct: 196 AYDSKADIWSLGITAIELAKGEPPNSDMHPM--------RVL--FLIPKNNPPTL-VGDF 244
Query: 1047 LISIMEVAISCLDENPDSRPTMQKV 1071
S E +CL+++P RPT +++
Sbjct: 245 TKSFKEFIDACLNKDPSFRPTAKEL 269
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 80.9 bits (198), Expect = 4e-15, Method: Composition-based stats.
Identities = 71/272 (26%), Positives = 127/272 (46%), Gaps = 36/272 (13%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G V+ + VA+K +S + FL E + + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S +IV EY+ GSL L + L Q +++ +A ++Y+ + V
Sbjct: 82 VSE-EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD+++ N+L+ V+DFG+++ + + + +T G I + APE A + T
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 991 KSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP-----RLPAPSCNIR 1044
KSDV+SFG+L E KG+ P ++R E+LD R+P P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP---------YPGMVNR---EVLDQVERGYRMPCPP---- 238
Query: 1045 DKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
+ S+ ++ C ++P+ RPT + + L+
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 8/208 (3%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DF + +G G VYRAE + +G VA+K + + Q NEVK +++H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
+I++ Y + + + ++V E G + L N + + + + + + YLH
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN--RVKPFSENEARHFMHQIITGMLYLH 129
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLK-PDSSNWTELAGTIGYVAPELAY 984
+ I++RD++ N+LL ++DFG++ LK P ++T L GT Y++PE+A
Sbjct: 130 SH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEIAT 185
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHPRD 1012
+SDV+S G + + G+ P D
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 80.5 bits (197), Expect = 5e-15, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 125/270 (46%), Gaps = 25/270 (9%)
Query: 806 NDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+DF+ +G G G+VY A E S IVA+K + + + + E++ + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
NI++ Y + R +++ EY G L L + + +E + +++ +ADAL Y
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDE---QRTATIMEELADALMYC 139
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H +++RDI +N+LL L+ E ++DFG S+ S + GT+ Y+ PE+
Sbjct: 140 HGK---KVIHRDIKPENLLLGLKGELKIADFGW--SVHAPSLRRKTMCGTLDYLPPEMIE 194
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEI--LDPRLPAPSCN 1042
EK D++ GVL E + G P + S++ + T I +D + PA
Sbjct: 195 GRMHNEKVDLWCIGVLCYELLVGNPPFE--------SASHNETYRRIVKVDLKFPASVPT 246
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKVS 1072
LIS + L NP R + +VS
Sbjct: 247 GAQDLISKL------LRHNPSERLPLAQVS 270
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 121/273 (44%), Gaps = 34/273 (12%)
Query: 814 IGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V+ L + +VAVK L ++ + FL E + L + H NIV+ G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK--FLQEARILKQYSHPNIVRLIG 179
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
C+ + +IV E ++ G L T L + ++ A + YL + C
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLR--TEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-----TIGYVAPELAYTMK 987
++RD++++N L+ + +SDFG+S+ ++ +G + + APE +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSRE---EADGVYAASGGLRQVPVKWTAPEALNYGR 291
Query: 988 VTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDP--RLPAPS-CNI 1043
+ +SDV+SFG+L E G P +S ++ E ++ RLP P C
Sbjct: 292 YSSESDVWSFGILLWETFSLGASPYPNLS---------NQQTREFVEKGGRLPCPELCP- 341
Query: 1044 RDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
D + +ME C P RP+ + Q L+
Sbjct: 342 -DAVFRLME---QCWAYEPGQRPSFSTIYQELQ 370
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 80.1 bits (196), Expect = 6e-15, Method: Composition-based stats.
Identities = 71/272 (26%), Positives = 126/272 (46%), Gaps = 36/272 (13%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G V+ + VA+K +S + FL E + + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S +IV EY+ GSL L + L Q +++ +A ++Y+ + V
Sbjct: 82 VSE-EPIYIVIEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD+ + N+L+ V+DFG+++ + + + +T G I + APE A + T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 991 KSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP-----RLPAPSCNIR 1044
KSDV+SFG+L E KG+ P ++R E+LD R+P P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP---------YPGMVNR---EVLDQVERGYRMPCPP---- 238
Query: 1045 DKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
+ S+ ++ C ++P+ RPT + + L+
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc1
Length = 275
Score = 79.7 bits (195), Expect = 7e-15, Method: Composition-based stats.
Identities = 71/272 (26%), Positives = 126/272 (46%), Gaps = 36/272 (13%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G V+ + VA+K +S + FL E + + ++RH +V+ Y
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAV 70
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S +IV EY+ GSL L + L Q +++ +A ++Y+ + V
Sbjct: 71 VSE-EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY---V 125
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD+ + N+L+ V+DFG+++ + + + +T G I + APE A + T
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 183
Query: 991 KSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP-----RLPAPSCNIR 1044
KSDV+SFG+L E KG+ P ++R E+LD R+P P
Sbjct: 184 KSDVWSFGILLTELTTKGRVP---------YPGMVNR---EVLDQVERGYRMPCPP---- 227
Query: 1045 DKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
+ S+ ++ C ++P+ RPT + + L+
Sbjct: 228 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 259
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 79.7 bits (195), Expect = 7e-15, Method: Composition-based stats.
Identities = 71/272 (26%), Positives = 126/272 (46%), Gaps = 36/272 (13%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G V+ + VA+K +S + FL E + + ++RH +V+ Y
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAV 72
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S +IV EY+ GSL L + L Q +++ +A ++Y+ + V
Sbjct: 73 VSE-EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY---V 127
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD+ + N+L+ V+DFG+++ + + + +T G I + APE A + T
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 185
Query: 991 KSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP-----RLPAPSCNIR 1044
KSDV+SFG+L E KG+ P ++R E+LD R+P P
Sbjct: 186 KSDVWSFGILLTELTTKGRVP---------YPGMVNR---EVLDQVERGYRMPCPP---- 229
Query: 1045 DKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
+ S+ ++ C ++P+ RPT + + L+
Sbjct: 230 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 261
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex
With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In Complex
With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds That
Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds That
Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 79.7 bits (195), Expect = 7e-15, Method: Composition-based stats.
Identities = 71/272 (26%), Positives = 126/272 (46%), Gaps = 36/272 (13%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G V+ + VA+K +S + FL E + + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S +IV EY+ GSL L + L Q +++ +A ++Y+ + V
Sbjct: 82 VSE-EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD+ + N+L+ V+DFG+++ + + + +T G I + APE A + T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 991 KSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP-----RLPAPSCNIR 1044
KSDV+SFG+L E KG+ P ++R E+LD R+P P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP---------YPGMVNR---EVLDQVERGYRMPCPP---- 238
Query: 1045 DKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
+ S+ ++ C ++P+ RPT + + L+
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 79.7 bits (195), Expect = 8e-15, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 32/270 (11%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G V+ + VA+K +S + FL E + + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S +IV EY+ GSL L + L Q +++ +A ++Y+ + V
Sbjct: 82 VSE-EPIYIVIEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-TIGYVAPELAYTMKVTEKS 992
+RD+ + N+L+ V+DFG+++ ++ + + A I + APE A + T KS
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 993 DVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP-----RLPAPSCNIRDK 1046
DV+SFG+L E KG+ P ++R E+LD R+P P +
Sbjct: 197 DVWSFGILLTELTTKGRVP---------YPGMVNR---EVLDQVERGYRMPCPP----EC 240
Query: 1047 LISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
S+ ++ C ++P+ RPT + + L+
Sbjct: 241 PESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 79.7 bits (195), Expect = 9e-15, Method: Composition-based stats.
Identities = 71/272 (26%), Positives = 126/272 (46%), Gaps = 36/272 (13%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G V+ + VA+K +S + FL E + + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S +IV EY+ GSL L + L Q +++ +A ++Y+ + V
Sbjct: 82 VSE-EPIYIVCEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD+ + N+L+ V+DFG+++ + + + +T G I + APE A + T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 991 KSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP-----RLPAPSCNIR 1044
KSDV+SFG+L E KG+ P ++R E+LD R+P P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP---------YPGMVNR---EVLDQVERGYRMPCPP---- 238
Query: 1045 DKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
+ S+ ++ C ++P+ RPT + + L+
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition By
Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition By
Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A Taxol-
Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A Taxol-
Induced Checkpoint Sensitivity Screen
Length = 284
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 9/208 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+DFD +G G G+VY A E + I+A+K L + + + E++ + +RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
NI++ Y + + +++ E+ G L L +E + ++ +ADAL Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALHYC 130
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H +++RDI +N+L+ + E ++DFG S+ S + GT+ Y+ PE+
Sbjct: 131 HER---KVIHRDIKPENLLMGYKGELKIADFGW--SVHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHPRD 1012
EK D++ GVL E + G P D
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 9/208 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+DFD +G G G+VY A E + I+A+K L + + + E++ + +RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
NI++ Y + + +++ E+ G L L +E + ++ +ADAL Y
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALHYC 131
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H +++RDI +N+L+ + E ++DFG S+ S + GT+ Y+ PE+
Sbjct: 132 HER---KVIHRDIKPENLLMGYKGELKIADFGW--SVHAPSLRRRXMCGTLDYLPPEMIE 186
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHPRD 1012
EK D++ GVL E + G P D
Sbjct: 187 GKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 32/270 (11%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G V+ + VA+K +S + FL E + + ++RH +V+ Y
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAV 71
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S IV EY+ GSL L T + L Q +++ +A ++Y+ + V
Sbjct: 72 VSE-EPIXIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNY---V 126
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-TIGYVAPELAYTMKVTEKS 992
+RD+ + N+L+ V+DFG+++ ++ + + A I + APE A + T KS
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 186
Query: 993 DVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP-----RLPAPSCNIRDK 1046
DV+SFG+L E KG+ P ++R E+LD R+P P +
Sbjct: 187 DVWSFGILLTELTTKGRVP---------YPGMVNR---EVLDQVERGYRMPCPP----EC 230
Query: 1047 LISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
S+ ++ C + P+ RPT + + L+
Sbjct: 231 PESLHDLMCQCWRKEPEERPTFEYLQAFLE 260
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 9/208 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+DFD +G G G+VY A E + I+A+K L + + + E++ + +RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
NI++ Y + + +++ E+ G L L +E + ++ +ADAL Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALHYC 130
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H +++RDI +N+L+ + E ++DFG S+ S + GT+ Y+ PE+
Sbjct: 131 HER---KVIHRDIKPENLLMGYKGELKIADFGW--SVHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHPRD 1012
EK D++ GVL E + G P D
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 124/273 (45%), Gaps = 38/273 (13%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G V+ + VA+K +S + FL E + + ++RH +V+ Y
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSP----EAFLQEAQVMKKLRHEKLVQLYAV 248
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S +IV EY+ GSL L + L Q +++ +A ++Y+ + V
Sbjct: 249 VSE-EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY---V 303
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD+ + N+L+ V+DFG+ + + + + +T G I + APE A + T
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 361
Query: 991 KSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP-----RLPA-PSCNI 1043
KSDV+SFG+L E KG+ P + + E+LD R+P P C
Sbjct: 362 KSDVWSFGILLTELTTKGRVPYPGMVN------------REVLDQVERGYRMPCPPECP- 408
Query: 1044 RDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
S+ ++ C ++P+ RPT + + L+
Sbjct: 409 ----ESLHDLMCQCWRKDPEERPTFEYLQAFLE 437
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Inhibitor
Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Inhibitor
Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 125/272 (45%), Gaps = 36/272 (13%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G V+ + VA+K +S + FL E + + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S +IV EY+ G L L + L Q +++ +A ++Y+ + V
Sbjct: 82 VSE-EPIYIVMEYMSKGCLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD+ + N+L+ V+DFG+++ + + + +T G I + APE A + T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 991 KSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP-----RLPAPSCNIR 1044
KSDV+SFG+L E KG+ P ++R E+LD R+P P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP---------YPGMVNR---EVLDQVERGYRMPCPP---- 238
Query: 1045 DKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
+ S+ ++ C ++P+ RPT + + L+
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 69/241 (28%), Positives = 112/241 (46%), Gaps = 32/241 (13%)
Query: 807 DFDEEHCIGTGGQGSVY--RAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
DF +GTG G V+ R+ +G A+K ++ + + +E L+ + H
Sbjct: 7 DFQILRTLGTGSFGRVHLIRSR-HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 65
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRM-NVIKG-----VA 918
I++ +G A+ F++ +Y+E G L +L +QR N + V
Sbjct: 66 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK---------SQRFPNPVAKFYAAEVC 116
Query: 919 DALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYV 978
AL YLH+ I+YRD+ +N+LLD ++DFG +K + PD + L GT Y+
Sbjct: 117 LALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVT--YXLCGTPDYI 170
Query: 979 APELAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
APE+ T + D +SFG+L E + G P SN +T ++IL+ L
Sbjct: 171 APEVVSTKPYNKSIDWWSFGILIYEMLAGYTP--------FYDSNTMKTYEKILNAELRF 222
Query: 1039 P 1039
P
Sbjct: 223 P 223
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 125/272 (45%), Gaps = 36/272 (13%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G V+ + VA+K +S + FL E + + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S +IV EY+ G L L + L Q +++ +A ++Y+ + V
Sbjct: 82 VSE-EPIYIVTEYMSKGCLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT---IGYVAPELAYTMKVTE 990
+RD+ + N+L+ V+DFG+++ + + + +T G I + APE A + T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 991 KSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP-----RLPAPSCNIR 1044
KSDV+SFG+L E KG+ P ++R E+LD R+P P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP---------YPGMVNR---EVLDQVERGYRMPCPP---- 238
Query: 1045 DKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
+ S+ ++ C ++P+ RPT + + L+
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 63/191 (32%), Positives = 92/191 (48%), Gaps = 14/191 (7%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG G G V + G VAVK + Q FL E +T++RH N+V+ G
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVK-----CIKNDATAQAFLAEASVMTQLRHSNLVQLLGV 67
Query: 874 CSHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
+ +IV EY+ GSL L + LG + V +A+ YL + F
Sbjct: 68 IVEEKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF--- 123
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
V+RD++++NVL+ + A VSDFG++K SS + + APE K + KS
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTKEA---SSTQDTGKLPVKWTAPEALREKKFSTKS 180
Query: 993 DVYSFGVLALE 1003
DV+SFG+L E
Sbjct: 181 DVWSFGILLWE 191
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 63/191 (32%), Positives = 92/191 (48%), Gaps = 14/191 (7%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG G G V + G VAVK + Q FL E +T++RH N+V+ G
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVK-----CIKNDATAQAFLAEASVMTQLRHSNLVQLLGV 82
Query: 874 CSHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
+ +IV EY+ GSL L + LG + V +A+ YL + F
Sbjct: 83 IVEEKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF--- 138
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
V+RD++++NVL+ + A VSDFG++K SS + + APE K + KS
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTKEA---SSTQDTGKLPVKWTAPEALREKKFSTKS 195
Query: 993 DVYSFGVLALE 1003
DV+SFG+L E
Sbjct: 196 DVWSFGILLWE 206
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs
Length = 301
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 133/272 (48%), Gaps = 30/272 (11%)
Query: 806 NDFDEEHCIGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+DF++ +G G G V++ + SG ++A K H L + + + + E++ L E
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 66
Query: 865 RNIVKFYG-FCSHARHSFIVYEYLEMGSLAMILSNATS-AEELGWTQRMNVIKGVADALS 922
IV FYG F S S I E+++ GSL +L A E++ + VIKG L+
Sbjct: 67 PYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LT 121
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
YL I++RD+ N+L++ E + DFG+S L + +N E GT Y++PE
Sbjct: 122 YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN--EFVGTRSYMSPER 177
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILD---PRLPAP 1039
+ +SD++S G+ +E G++PR ++ + LD I++ P+LP+
Sbjct: 178 LQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMA--------IFELLDYIVNEPPPKLPSA 229
Query: 1040 SCNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
+ + + CL +NP R ++++
Sbjct: 230 VFS-----LEFQDFVNKCLIKNPAERADLKQL 256
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 24/279 (8%)
Query: 800 EIVRATNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSL 859
E+ R T E +G G G V+ + VAVK +S FL E +
Sbjct: 17 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLM 70
Query: 860 TEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
+++H+ +V+ Y + +I+ EY+E GSL L S +L + +++ +A+
Sbjct: 71 KQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAE 128
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-TIGYV 978
++++ + ++RD+ + N+L+ ++DFG+++ ++ + E A I +
Sbjct: 129 GMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 185
Query: 979 APELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLP 1037
APE T KSDV+SFG+L E + G+ P +++ NL+R R+
Sbjct: 186 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-EVIQNLERGY------RMV 238
Query: 1038 APSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
P N ++L +M + C E P+ RPT + +L+
Sbjct: 239 RPD-NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 273
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 24/279 (8%)
Query: 800 EIVRATNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSL 859
E+ R T E +G G G V+ + VAVK +S FL E +
Sbjct: 9 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLM 62
Query: 860 TEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
+++H+ +V+ Y + +I+ EY+E GSL L S +L + +++ +A+
Sbjct: 63 KQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAE 120
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-TIGYV 978
++++ + ++RD+ + N+L+ ++DFG+++ ++ + E A I +
Sbjct: 121 GMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 177
Query: 979 APELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLP 1037
APE T KSDV+SFG+L E + G+ P +++ NL+R R+
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-EVIQNLERGY------RMV 230
Query: 1038 APSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
P N ++L +M + C E P+ RPT + +L+
Sbjct: 231 RPD-NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 265
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 24/279 (8%)
Query: 800 EIVRATNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSL 859
E+ R T E +G G G V+ + VAVK +S FL E +
Sbjct: 9 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLM 62
Query: 860 TEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
+++H+ +V+ Y + +I+ EY+E GSL L S +L + +++ +A+
Sbjct: 63 KQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAE 120
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-TIGYV 978
++++ + ++RD+ + N+L+ ++DFG+++ ++ + E A I +
Sbjct: 121 GMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 177
Query: 979 APELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLP 1037
APE T KSDV+SFG+L E + G+ P +++ NL+R R+
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-EVIQNLERGY------RMV 230
Query: 1038 APSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
P N ++L +M + C E P+ RPT + +L+
Sbjct: 231 RPD-NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 265
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
Length = 285
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 24/279 (8%)
Query: 800 EIVRATNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSL 859
E+ R T E +G G G V+ + VAVK +S FL E +
Sbjct: 15 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLM 68
Query: 860 TEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
+++H+ +V+ Y + +I+ EY+E GSL L S +L + +++ +A+
Sbjct: 69 KQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAE 126
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-TIGYV 978
++++ + ++RD+ + N+L+ ++DFG+++ ++ + E A I +
Sbjct: 127 GMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 183
Query: 979 APELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLP 1037
APE T KSDV+SFG+L E + G+ P +++ NL+R R+
Sbjct: 184 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-EVIQNLERGY------RMV 236
Query: 1038 APSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
P N ++L +M + C E P+ RPT + +L+
Sbjct: 237 RPD-NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 271
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 24/279 (8%)
Query: 800 EIVRATNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSL 859
E+ R T E +G G G V+ + VAVK +S FL E +
Sbjct: 10 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLM 63
Query: 860 TEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
+++H+ +V+ Y + +I+ EY+E GSL L S +L + +++ +A+
Sbjct: 64 KQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAE 121
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-TIGYV 978
++++ + ++RD+ + N+L+ ++DFG+++ ++ + E A I +
Sbjct: 122 GMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 178
Query: 979 APELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLP 1037
APE T KSDV+SFG+L E + G+ P +++ NL+R R+
Sbjct: 179 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-EVIQNLERGY------RMV 231
Query: 1038 APSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
P N ++L +M + C E P+ RPT + +L+
Sbjct: 232 RPD-NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 266
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 24/279 (8%)
Query: 800 EIVRATNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSL 859
E+ R T E +G G G V+ + VAVK +S FL E +
Sbjct: 11 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLM 64
Query: 860 TEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
+++H+ +V+ Y + +I+ EY+E GSL L S +L + +++ +A+
Sbjct: 65 KQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAE 122
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-TIGYV 978
++++ + ++RD+ + N+L+ ++DFG+++ ++ + E A I +
Sbjct: 123 GMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 179
Query: 979 APELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLP 1037
APE T KSDV+SFG+L E + G+ P +++ NL+R R+
Sbjct: 180 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-EVIQNLERGY------RMV 232
Query: 1038 APSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
P N ++L +M + C E P+ RPT + +L+
Sbjct: 233 RPD-NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 267
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 24/279 (8%)
Query: 800 EIVRATNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSL 859
E+ R T E +G G G V+ + VAVK +S FL E +
Sbjct: 18 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLM 71
Query: 860 TEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
+++H+ +V+ Y + +I+ EY+E GSL L S +L + +++ +A+
Sbjct: 72 KQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAE 129
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-TIGYV 978
++++ + ++RD+ + N+L+ ++DFG+++ ++ + E A I +
Sbjct: 130 GMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 186
Query: 979 APELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLP 1037
APE T KSDV+SFG+L E + G+ P +++ NL+R R+
Sbjct: 187 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-EVIQNLERGY------RMV 239
Query: 1038 APSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
P N ++L +M + C E P+ RPT + +L+
Sbjct: 240 RPD-NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 274
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 79/284 (27%), Positives = 124/284 (43%), Gaps = 38/284 (13%)
Query: 808 FDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
F+ +G G G VY+ + +G++ A+K E +QE +N +K + HRN
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQE-INMLKKYSH--HRN 82
Query: 867 IVKFYGFCSHAR------HSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADA 920
I +YG ++V E+ GS+ ++ N T L + + +
Sbjct: 83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN-TKGNTLKEEWIAYICREILRG 141
Query: 921 LSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAP 980
LS+LH +++RDI +NVLL E + DFG+S L GT ++AP
Sbjct: 142 LSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAP 198
Query: 981 ELAYTMKVTE-----KSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPR 1035
E+ + + KSD++S G+ A+E +G P +C R L L PR
Sbjct: 199 EVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP------LCDMHPM--RAL--FLIPR 248
Query: 1036 LPAPSCNIR---DKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
PAP + K S +E SCL +N RP + QL+K
Sbjct: 249 NPAPRLKSKKWSKKFQSFIE---SCLVKNHSQRPATE---QLMK 286
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In
Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 24/279 (8%)
Query: 800 EIVRATNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSL 859
E+ R T E +G G G V+ + VAVK +S FL E +
Sbjct: 9 EVPRETLKLVER--LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLM 62
Query: 860 TEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
+++H+ +V+ Y + +I+ EY+E GSL L S +L + +++ +A+
Sbjct: 63 KQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAE 120
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-TIGYV 978
++++ + ++RD+ + N+L+ ++DFG+++ ++ E A I +
Sbjct: 121 GMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWT 177
Query: 979 APELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLP 1037
APE T KSDV+SFG+L E + G+ P +++ NL+R R+
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-EVIQNLERGY------RMV 230
Query: 1038 APSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
P N ++L +M + C E P+ RPT + +L+
Sbjct: 231 RPD-NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 265
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 24/279 (8%)
Query: 800 EIVRATNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSL 859
E+ R T E +G G G V+ + VAVK +S FL E +
Sbjct: 15 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLM 68
Query: 860 TEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
+++H+ +V+ Y + +I+ EY+E GSL L S +L + +++ +A+
Sbjct: 69 KQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAE 126
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-TIGYV 978
++++ + ++RD+ + N+L+ ++DFG+++ ++ + E A I +
Sbjct: 127 GMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 183
Query: 979 APELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLP 1037
APE T KSDV+SFG+L E + G+ P +++ NL+R R+
Sbjct: 184 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-EVIQNLERGY------RMV 236
Query: 1038 APSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
P N ++L +M + C E P+ RPT + +L+
Sbjct: 237 RPD-NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 271
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 24/279 (8%)
Query: 800 EIVRATNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSL 859
E+ R T E +G G G V+ + VAVK +S FL E +
Sbjct: 19 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLM 72
Query: 860 TEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
+++H+ +V+ Y + +I+ EY+E GSL L S +L + +++ +A+
Sbjct: 73 KQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAE 130
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-TIGYV 978
++++ + ++RD+ + N+L+ ++DFG+++ ++ + E A I +
Sbjct: 131 GMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 187
Query: 979 APELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLP 1037
APE T KSDV+SFG+L E + G+ P +++ NL+R R+
Sbjct: 188 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-EVIQNLERGY------RMV 240
Query: 1038 APSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
P N ++L +M + C E P+ RPT + +L+
Sbjct: 241 RPD-NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 275
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 24/279 (8%)
Query: 800 EIVRATNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSL 859
E+ R T E +G G G V+ + VAVK +S FL E +
Sbjct: 9 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLM 62
Query: 860 TEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
+++H+ +V+ Y + +I+ EY+E GSL L S +L + +++ +A+
Sbjct: 63 KQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAE 120
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-TIGYV 978
++++ + ++RD+ + N+L+ ++DFG+++ ++ + E A I +
Sbjct: 121 GMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 177
Query: 979 APELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLP 1037
APE T KSDV+SFG+L E + G+ P +++ NL+R R+
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-EVIQNLERGY------RMV 230
Query: 1038 APSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
P N ++L +M + C E P+ RPT + +L+
Sbjct: 231 RPD-NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 265
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 24/279 (8%)
Query: 800 EIVRATNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSL 859
E+ R T E +G G G V+ + VAVK +S FL E +
Sbjct: 4 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLM 57
Query: 860 TEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
+++H+ +V+ Y + +I+ EY+E GSL L S +L + +++ +A+
Sbjct: 58 KQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAE 115
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-TIGYV 978
++++ + ++RD+ + N+L+ ++DFG+++ ++ + E A I +
Sbjct: 116 GMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 172
Query: 979 APELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLP 1037
APE T KSDV+SFG+L E + G+ P +++ NL+R R+
Sbjct: 173 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-EVIQNLERGY------RMV 225
Query: 1038 APSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
P N ++L +M + C E P+ RPT + +L+
Sbjct: 226 RPD-NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 260
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 24/279 (8%)
Query: 800 EIVRATNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSL 859
E+ R T E +G G G V+ + VAVK +S FL E +
Sbjct: 14 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLM 67
Query: 860 TEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
+++H+ +V+ Y + +I+ EY+E GSL L S +L + +++ +A+
Sbjct: 68 KQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAE 125
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-TIGYV 978
++++ + ++RD+ + N+L+ ++DFG+++ ++ + E A I +
Sbjct: 126 GMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 182
Query: 979 APELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLP 1037
APE T KSDV+SFG+L E + G+ P +++ NL+R R+
Sbjct: 183 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-EVIQNLERGY------RMV 235
Query: 1038 APSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
P N ++L +M + C E P+ RPT + +L+
Sbjct: 236 RPD-NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 270
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 71/280 (25%), Positives = 131/280 (46%), Gaps = 31/280 (11%)
Query: 806 NDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+D++ + IG+G V A + E VA+K+ + L T E L E++++++ H
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN--LEKCQTSMDELLKEIQAMSQCHH 67
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEE-----LGWTQRMNVIKGVAD 919
NIV +Y ++V + L GS+ I+ + + E L + +++ V +
Sbjct: 68 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPD-----SSNWTELAGT 974
L YLH + ++RD+ + N+LL + ++DFG+S L + GT
Sbjct: 128 GLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 975 IGYVAPELAYTMKVTE-KSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILD 1033
++APE+ ++ + K+D++SFG+ A+E G P + L TL D
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM----KVLMLTLQN--D 238
Query: 1034 PRLPAPSCNIRDKLI------SIMEVAISCLDENPDSRPT 1067
P P+ ++DK + S ++ CL ++P+ RPT
Sbjct: 239 P--PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 276
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 71/280 (25%), Positives = 131/280 (46%), Gaps = 31/280 (11%)
Query: 806 NDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+D++ + IG+G V A + E VA+K+ + L T E L E++++++ H
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN--LEKCQTSMDELLKEIQAMSQCHH 72
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEE-----LGWTQRMNVIKGVAD 919
NIV +Y ++V + L GS+ I+ + + E L + +++ V +
Sbjct: 73 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPD-----SSNWTELAGT 974
L YLH + ++RD+ + N+LL + ++DFG+S L + GT
Sbjct: 133 GLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 975 IGYVAPELAYTMKVTE-KSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILD 1033
++APE+ ++ + K+D++SFG+ A+E G P + L TL D
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM----KVLMLTLQN--D 243
Query: 1034 PRLPAPSCNIRDKLI------SIMEVAISCLDENPDSRPT 1067
P P+ ++DK + S ++ CL ++P+ RPT
Sbjct: 244 P--PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 281
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 76.6 bits (187), Expect = 7e-14, Method: Composition-based stats.
Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 21/264 (7%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G V+ ++ VAVK +S Q FL E + ++H +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS----VQAFLEEANLMKTLQHDKLVRLYAV 76
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
+ +I+ EY+ GSL L + + L + ++ +A+ ++Y+ + +
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY---I 132
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-TIGYVAPELAYTMKVTEKS 992
+RD+ + NVL+ ++DFG+++ ++ + E A I + APE T KS
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 192
Query: 993 DVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIM 1051
DV+SFG+L E + GK P +N D R+P N D+L IM
Sbjct: 193 DVWSFGILLYEIVTYGKIPY-------PGRTNADVMTALSQGYRMPRVE-NCPDELYDIM 244
Query: 1052 EVAISCLDENPDSRPTMQKVSQLL 1075
++ C E + RPT + +L
Sbjct: 245 KM---CWKEKAEERPTFDYLQSVL 265
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex
With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 76.3 bits (186), Expect = 8e-14, Method: Composition-based stats.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
+ E L E + ++ + IV+ G C A +V E E+G L L ++
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 111
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNW 968
+ ++ V+ + YL F V+RD++++NVLL ++ A +SDFG+SK+L+ D + +
Sbjct: 112 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXY 168
Query: 969 ---TELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHP 1010
T + + APE K + KSDV+SFGVL EA G+ P
Sbjct: 169 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
+ E L E + ++ + IV+ G C A +V E E+G L L ++
Sbjct: 50 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 105
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNW 968
+ ++ V+ + YL F V+RD++++NVLL ++ A +SDFG+SK+L+ D + +
Sbjct: 106 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 162
Query: 969 ---TELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHP 1010
T + + APE K + KSDV+SFGVL EA G+ P
Sbjct: 163 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
+ E L E + ++ + IV+ G C A +V E E+G L L ++
Sbjct: 62 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 117
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNW 968
+ ++ V+ + YL F V+RD++++NVLL ++ A +SDFG+SK+L+ D + +
Sbjct: 118 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 174
Query: 969 ---TELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHP 1010
T + + APE K + KSDV+SFGVL EA G+ P
Sbjct: 175 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
+ E L E + ++ + IV+ G C A +V E E+G L L ++
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 127
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNW 968
+ ++ V+ + YL F V+RD++++NVLL ++ A +SDFG+SK+L+ D + +
Sbjct: 128 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 969 ---TELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHP 1010
T + + APE K + KSDV+SFGVL EA G+ P
Sbjct: 185 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
+ E L E + ++ + IV+ G C A +V E E+G L L ++
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 127
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNW 968
+ ++ V+ + YL F V+RD++++NVLL ++ A +SDFG+SK+L+ D + +
Sbjct: 128 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 969 ---TELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHP 1010
T + + APE K + KSDV+SFGVL EA G+ P
Sbjct: 185 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
+ E L E + ++ + IV+ G C A +V E E+G L L ++
Sbjct: 52 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 107
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNW 968
+ ++ V+ + YL F V+RD++++NVLL ++ A +SDFG+SK+L+ D + +
Sbjct: 108 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 164
Query: 969 ---TELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHP 1010
T + + APE K + KSDV+SFGVL EA G+ P
Sbjct: 165 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex
With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
+ E L E + ++ + IV+ G C A +V E E+G L L ++
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 111
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNW 968
+ ++ V+ + YL F V+RD++++NVLL ++ A +SDFG+SK+L+ D + +
Sbjct: 112 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 168
Query: 969 ---TELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHP 1010
T + + APE K + KSDV+SFGVL EA G+ P
Sbjct: 169 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
+ E L E + ++ + IV+ G C A +V E E+G L L ++
Sbjct: 70 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 125
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNW 968
+ ++ V+ + YL F V+RD++++NVLL ++ A +SDFG+SK+L+ D + +
Sbjct: 126 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 182
Query: 969 ---TELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHP 1010
T + + APE K + KSDV+SFGVL EA G+ P
Sbjct: 183 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 40/293 (13%)
Query: 813 CIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
C+G G G V+R GE VAVK F S + E N V +RH NI+ F
Sbjct: 15 CVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVM----LRHENILGFIA 69
Query: 873 FCSHARHS----FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDC 928
+RHS +++ Y EMGSL L T L + ++ +A L++LH +
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT----LDTVSCLRIVLSIASGLAHLHIEI 125
Query: 929 F-----PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELA-----GTIGYV 978
F P I +RD+ SKN+L+ + ++D G++ + S+N ++ GT Y+
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 979 APE-LAYTMKVT-----EKSDVYSFGVLALE--------AIKGKHPRDFISSICSTSSNL 1024
APE L T++V ++ D+++FG++ E I + F + + S
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFE 244
Query: 1025 DRTLDEILDPRLP-APSCNIRD-KLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
D +D + P P+ D L S+ ++ C +NP +R T ++ + L
Sbjct: 245 DMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 297
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
Length = 301
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 40/293 (13%)
Query: 813 CIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
C+G G G V+R GE VAVK F S + E N V +RH NI+ F
Sbjct: 15 CVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVM----LRHENILGFIA 69
Query: 873 FCSHARHS----FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDC 928
+RHS +++ Y EMGSL L T L + ++ +A L++LH +
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT----LDTVSCLRIVLSIASGLAHLHIEI 125
Query: 929 F-----PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELA-----GTIGYV 978
F P I +RD+ SKN+L+ + ++D G++ + S+N ++ GT Y+
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 979 APE-LAYTMKVT-----EKSDVYSFGVLALE--------AIKGKHPRDFISSICSTSSNL 1024
APE L T++V ++ D+++FG++ E I + F + + S
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFE 244
Query: 1025 DRTLDEILDPRLP-APSCNIRD-KLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
D +D + P P+ D L S+ ++ C +NP +R T ++ + L
Sbjct: 245 DMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 297
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
Length = 341
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 116/270 (42%), Gaps = 24/270 (8%)
Query: 814 IGTGGQGSVYRAELS--SGEIV--AVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVK 869
+G G G V R E SG+ V AVK +LS+ +F+ EV ++ + HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
YG +V E +GSL L LG R V VA+ + YL + F
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 136
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT---ELAGTIGYVAPELAYTM 986
++RD++++N+LL + DFG+ ++L + ++ + APE T
Sbjct: 137 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 987 KVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRD 1045
+ SD + FGV E G+ P I S + +D+ RLP P +D
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEPW-----IGLNGSQILHKIDK-EGERLPRPEDCPQD 247
Query: 1046 KLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
I V + C P+ RPT + L
Sbjct: 248 ----IYNVMVQCWAHKPEDRPTFVALRDFL 273
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 116/270 (42%), Gaps = 24/270 (8%)
Query: 814 IGTGGQGSVYRAELS--SGEIV--AVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVK 869
+G G G V R E SG+ V AVK +LS+ +F+ EV ++ + HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
YG +V E +GSL L LG R V VA+ + YL + F
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 136
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT---ELAGTIGYVAPELAYTM 986
++RD++++N+LL + DFG+ ++L + ++ + APE T
Sbjct: 137 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 987 KVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRD 1045
+ SD + FGV E G+ P I S + +D+ RLP P +D
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEPW-----IGLNGSQILHKIDK-EGERLPRPEDCPQD 247
Query: 1046 KLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
I V + C P+ RPT + L
Sbjct: 248 ----IYNVMVQCWAHKPEDRPTFVALRDFL 273
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 116/270 (42%), Gaps = 24/270 (8%)
Query: 814 IGTGGQGSVYRAELS--SGEIV--AVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVK 869
+G G G V R E SG+ V AVK +LS+ +F+ EV ++ + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
YG +V E +GSL L LG R V VA+ + YL + F
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 132
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT---ELAGTIGYVAPELAYTM 986
++RD++++N+LL + DFG+ ++L + ++ + APE T
Sbjct: 133 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 987 KVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRD 1045
+ SD + FGV E G+ P I S + +D+ RLP P +D
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPW-----IGLNGSQILHKIDK-EGERLPRPEDCPQD 243
Query: 1046 KLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
I V + C P+ RPT + L
Sbjct: 244 ----IYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 116/270 (42%), Gaps = 24/270 (8%)
Query: 814 IGTGGQGSVYRAELS--SGEIV--AVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVK 869
+G G G V R E SG+ V AVK +LS+ +F+ EV ++ + HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
YG +V E +GSL L LG R V VA+ + YL + F
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 142
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT---ELAGTIGYVAPELAYTM 986
++RD++++N+LL + DFG+ ++L + ++ + APE T
Sbjct: 143 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 987 KVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRD 1045
+ SD + FGV E G+ P I S + +D+ RLP P +D
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEPW-----IGLNGSQILHKIDK-EGERLPRPEDCPQD 253
Query: 1046 KLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
I V + C P+ RPT + L
Sbjct: 254 ----IYNVMVQCWAHKPEDRPTFVALRDFL 279
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 116/270 (42%), Gaps = 24/270 (8%)
Query: 814 IGTGGQGSVYRAELS--SGEIV--AVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVK 869
+G G G V R E SG+ V AVK +LS+ +F+ EV ++ + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
YG +V E +GSL L LG R V VA+ + YL + F
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 132
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT---ELAGTIGYVAPELAYTM 986
++RD++++N+LL + DFG+ ++L + ++ + APE T
Sbjct: 133 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 987 KVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRD 1045
+ SD + FGV E G+ P I S + +D+ RLP P +D
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPW-----IGLNGSQILHKIDK-EGERLPRPEDCPQD 243
Query: 1046 KLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
I V + C P+ RPT + L
Sbjct: 244 ----IYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 14/191 (7%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG G G V + G VAVK + Q FL E +T++RH N+V+ G
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVK-----CIKNDATAQAFLAEASVMTQLRHSNLVQLLGV 73
Query: 874 CSHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
+ +IV EY+ GSL L + LG + V +A+ YL + F
Sbjct: 74 IVEEKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF--- 129
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
V+RD++++NVL+ + A VSDFG++K SS + + APE + KS
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTKEA---SSTQDTGKLPVKWTAPEALREAAFSTKS 186
Query: 993 DVYSFGVLALE 1003
DV+SFG+L E
Sbjct: 187 DVWSFGILLWE 197
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
Length = 450
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 92/191 (48%), Gaps = 14/191 (7%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG G G V + G VAVK + Q FL E +T++RH N+V+ G
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVK-----CIKNDATAQAFLAEASVMTQLRHSNLVQLLGV 254
Query: 874 CSHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
+ +IV EY+ GSL L + LG + V +A+ YL + F
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF--- 310
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
V+RD++++NVL+ + A VSDFG++K SS + + APE K + KS
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTKEA---SSTQDTGKLPVKWTAPEALREKKFSTKS 367
Query: 993 DVYSFGVLALE 1003
DV+SFG+L E
Sbjct: 368 DVWSFGILLWE 378
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 40/293 (13%)
Query: 813 CIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
C+G G G V+R GE VAVK F S + E N V +RH NI+ F
Sbjct: 44 CVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVM----LRHENILGFIA 98
Query: 873 FCSHARHS----FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDC 928
+RHS +++ Y EMGSL L T L + ++ +A L++LH +
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT----LDTVSCLRIVLSIASGLAHLHIEI 154
Query: 929 F-----PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELA-----GTIGYV 978
F P I +RD+ SKN+L+ + ++D G++ + S+N ++ GT Y+
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 979 APE-LAYTMKVT-----EKSDVYSFGVLALE--------AIKGKHPRDFISSICSTSSNL 1024
APE L T++V ++ D+++FG++ E I + F + + S
Sbjct: 214 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFE 273
Query: 1025 DRTLDEILDPRLP-APSCNIRD-KLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
D +D + P P+ D L S+ ++ C +NP +R T ++ + L
Sbjct: 274 DMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 326
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 117/265 (44%), Gaps = 21/265 (7%)
Query: 808 FDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
F + IG G G V++ + + ++VA+K L ++ E+ L++
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
+ K+YG +I+ EYL GS +L E TQ +++ + L YLH+
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDE----TQIATILREILKGLDYLHS 142
Query: 927 DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTM 986
+ ++RDI + NVLL E ++DFG++ L GT ++APE+
Sbjct: 143 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS 199
Query: 987 KVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDK 1046
K+D++S G+ A+E +G+ P + + + L I P N
Sbjct: 200 AYDSKADIWSLGITAIELARGEPPHSELHPM--------KVLFLIPKNNPPTLEGNYSKP 251
Query: 1047 LISIMEVAISCLDENPDSRPTMQKV 1071
L +E +CL++ P RPT +++
Sbjct: 252 LKEFVE---ACLNKEPSFRPTAKEL 273
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1)
Length = 294
Score = 75.5 bits (184), Expect = 2e-13, Method: Composition-based stats.
Identities = 67/259 (25%), Positives = 120/259 (46%), Gaps = 21/259 (8%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G VY+ + + E+VA+K L ++ E+ L++ I +++G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
+ +I+ EYL GS A+ L EE T +++ + L YLH++
Sbjct: 85 SYLKSTKLWIIMEYLGGGS-ALDLLKPGPLEE---TYIATILREILKGLDYLHSE---RK 137
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
++RDI + NVLL + + ++DFG++ L GT ++APE+ K+
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKA 197
Query: 993 DVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIME 1052
D++S G+ A+E KG+ P +S+L L P+ P+ + E
Sbjct: 198 DIWSLGITAIELAKGEPP----------NSDLHPMRVLFLIPKNSPPTLEGQHSK-PFKE 246
Query: 1053 VAISCLDENPDSRPTMQKV 1071
+CL+++P RPT +++
Sbjct: 247 FVEACLNKDPRFRPTAKEL 265
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 69/279 (24%), Positives = 130/279 (46%), Gaps = 24/279 (8%)
Query: 800 EIVRATNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSL 859
E+ R T E +G G G V+ + VAVK +S FL E +
Sbjct: 5 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLM 58
Query: 860 TEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
+++H+ +V+ Y + +I+ EY+E GSL L S +L + +++ +A+
Sbjct: 59 KQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAE 116
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-TIGYV 978
++++ + ++R++ + N+L+ ++DFG+++ ++ + E A I +
Sbjct: 117 GMAFIEERNY---IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 173
Query: 979 APELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLP 1037
APE T KSDV+SFG+L E + G+ P +++ NL+R R+
Sbjct: 174 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-EVIQNLERGY------RMV 226
Query: 1038 APSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
P N ++L +M + C E P+ RPT + +L+
Sbjct: 227 RPD-NCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 261
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 79/301 (26%), Positives = 132/301 (43%), Gaps = 39/301 (12%)
Query: 790 LTFDRKIAYEEIVRATNDFDEEHCIGTGGQGS---VYRAELSSGEIVAVKKFHSPLLSEM 846
L F YE + R N D IG G G+ VY+A+ ++A K E
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 847 TCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELG 906
++++ E+ L H NIVK + + +I+ E+ G++ ++ L
Sbjct: 78 L--EDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE--RPLT 133
Query: 907 WTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSS 966
+Q V K DAL+YLH++ I++RD+ + N+L L+ + ++DFG+S
Sbjct: 134 ESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQ 190
Query: 967 NWTELAGTIGYVAPELAYTMKVTE-----KSDVYSFGVLALEAIKGKHPRDFISSICSTS 1021
GT ++APE+ + K+DV+S G+ +E + + P ++ +
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM---- 246
Query: 1022 SNLDRTLDEILD---PRLPAP---SCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
R L +I P L P S N +D L CL++N D+R T SQLL
Sbjct: 247 ----RVLLKIAKSEPPTLAQPSRWSSNFKDFL-------KKCLEKNVDARWT---TSQLL 292
Query: 1076 K 1076
+
Sbjct: 293 Q 293
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 79/301 (26%), Positives = 132/301 (43%), Gaps = 39/301 (12%)
Query: 790 LTFDRKIAYEEIVRATNDFDEEHCIGTGGQGS---VYRAELSSGEIVAVKKFHSPLLSEM 846
L F YE + R N D IG G G+ VY+A+ ++A K E
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 847 TCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELG 906
++++ E+ L H NIVK + + +I+ E+ G++ ++ L
Sbjct: 78 L--EDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE--RPLT 133
Query: 907 WTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSS 966
+Q V K DAL+YLH++ I++RD+ + N+L L+ + ++DFG+S
Sbjct: 134 ESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ 190
Query: 967 NWTELAGTIGYVAPELAYTMKVTE-----KSDVYSFGVLALEAIKGKHPRDFISSICSTS 1021
GT ++APE+ + K+DV+S G+ +E + + P ++ +
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM---- 246
Query: 1022 SNLDRTLDEILD---PRLPAP---SCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
R L +I P L P S N +D L CL++N D+R T SQLL
Sbjct: 247 ----RVLLKIAKSEPPTLAQPSRWSSNFKDFL-------KKCLEKNVDARWT---TSQLL 292
Query: 1076 K 1076
+
Sbjct: 293 Q 293
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
+ E L E + ++ + IV+ G C A +V E E+G L L ++
Sbjct: 414 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD---K 469
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNW 968
+ ++ V+ + YL F V+RD++++NVLL ++ A +SDFG+SK+L+ D + +
Sbjct: 470 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526
Query: 969 ---TELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHP 1010
T + + APE K + KSDV+SFGVL EA G+ P
Sbjct: 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
+ E L E + ++ + IV+ G C A +V E E+G L L ++
Sbjct: 415 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD---K 470
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNW 968
+ ++ V+ + YL F V+RD++++NVLL ++ A +SDFG+SK+L+ D + +
Sbjct: 471 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 527
Query: 969 ---TELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHP 1010
T + + APE K + KSDV+SFGVL EA G+ P
Sbjct: 528 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 128/268 (47%), Gaps = 24/268 (8%)
Query: 811 EHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
E +G G G V+ A + VAVK +S + FL E + ++H +VK
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS----VEAFLAEANVMKTLQHDKLVKL 75
Query: 871 YGFCSHARHSFIVYEYLEMGSLAMIL-SNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
+ + +I+ E++ GSL L S+ S + L + ++ +A+ ++++ +
Sbjct: 76 HAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRNY 132
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-TIGYVAPELAYTMKV 988
++RD+ + N+L+ ++DFG+++ ++ + E A I + APE
Sbjct: 133 ---IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSF 189
Query: 989 TEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKL 1047
T KSDV+SFG+L +E + G+ P +S + + R L+ R+P P N ++L
Sbjct: 190 TIKSDVWSFGILLMEIVTYGRIPYPGMS-----NPEVIRALER--GYRMPRPE-NCPEEL 241
Query: 1048 ISIMEVAISCLDENPDSRPTMQKVSQLL 1075
+IM + C P+ RPT + + +L
Sbjct: 242 YNIM---MRCWKNRPEERPTFEYIQSVL 266
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 79/301 (26%), Positives = 132/301 (43%), Gaps = 39/301 (12%)
Query: 790 LTFDRKIAYEEIVRATNDFDEEHCIGTGGQGS---VYRAELSSGEIVAVKKFHSPLLSEM 846
L F YE + R N D IG G G+ VY+A+ ++A K E
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 847 TCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELG 906
++++ E+ L H NIVK + + +I+ E+ G++ ++ L
Sbjct: 78 L--EDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE--RPLT 133
Query: 907 WTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSS 966
+Q V K DAL+YLH++ I++RD+ + N+L L+ + ++DFG+S
Sbjct: 134 ESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQ 190
Query: 967 NWTELAGTIGYVAPELAYTMKVTE-----KSDVYSFGVLALEAIKGKHPRDFISSICSTS 1021
GT ++APE+ + K+DV+S G+ +E + + P ++ +
Sbjct: 191 RRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM---- 246
Query: 1022 SNLDRTLDEILD---PRLPAP---SCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
R L +I P L P S N +D L CL++N D+R T SQLL
Sbjct: 247 ----RVLLKIAKSEPPTLAQPSRWSSNFKDFL-------KKCLEKNVDARWT---TSQLL 292
Query: 1076 K 1076
+
Sbjct: 293 Q 293
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 117/265 (44%), Gaps = 21/265 (7%)
Query: 808 FDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
F + IG G G V++ + + ++VA+K L ++ E+ L++
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
+ K+YG +I+ EYL GS +L E TQ +++ + L YLH+
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDE----TQIATILREILKGLDYLHS 137
Query: 927 DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTM 986
+ ++RDI + NVLL E ++DFG++ L GT ++APE+
Sbjct: 138 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS 194
Query: 987 KVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDK 1046
K+D++S G+ A+E +G+ P + + + L I P N
Sbjct: 195 AYDSKADIWSLGITAIELARGEPPHSELHPM--------KVLFLIPKNNPPTLEGNYSKP 246
Query: 1047 LISIMEVAISCLDENPDSRPTMQKV 1071
L +E +CL++ P RPT +++
Sbjct: 247 LKEFVE---ACLNKEPSFRPTAKEL 268
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 78/292 (26%), Positives = 132/292 (45%), Gaps = 38/292 (13%)
Query: 798 YEEIVRATNDFDEEHCIGTGGQ-GSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEV 856
YE + R N D IG G G VY+A+ ++A K E ++++ E+
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEEL--EDYMVEI 58
Query: 857 KSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKG 916
L H NIVK + + +I+ E+ G++ ++ L +Q V K
Sbjct: 59 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE--RPLTESQIQVVCKQ 116
Query: 917 VADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGIS-KSLKPDSSNWTELAGTI 975
DAL+YLH++ I++RD+ + N+L L+ + ++DFG+S K+ + GT
Sbjct: 117 TLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTP 173
Query: 976 GYVAPELAYTMKVTE-----KSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDE 1030
++APE+ + K+DV+S G+ +E + + P ++ + R L +
Sbjct: 174 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM--------RVLLK 225
Query: 1031 ILD---PRLPAP---SCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
I P L P S N +D L CL++N D+R T SQLL+
Sbjct: 226 IAKSEPPTLAQPSRWSSNFKDFL-------KKCLEKNVDARWT---TSQLLQ 267
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound
To Novel Bosutinib Isoform 1, Previously Thought To Be
Bosutinib
Length = 293
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 78/276 (28%), Positives = 136/276 (49%), Gaps = 40/276 (14%)
Query: 814 IGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G G G VY+A+ +G + A K + E+ ++++ E++ L H IVK G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL---EDYIVEIEILATCDHPYIVKLLG 75
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
H +I+ E+ G++ I+ L Q V + + +AL++LH+ I
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLELDRG--LTEPQIQVVCRQMLEALNFLHSK---RI 130
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGIS-KSLKPDSSNWTELAGTIGYVAPELAY--TMKVT 989
++RD+ + NVL+ LE + ++DFG+S K+LK GT ++APE+ TMK T
Sbjct: 131 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR-DSFIGTPYWMAPEVVMCETMKDT 189
Query: 990 E---KSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILD---PRLPAP---S 1040
K+D++S G+ +E + + P ++ + R L +I P L P S
Sbjct: 190 PYDYKADIWSLGITLIEMAQIEPPHHELNPM--------RVLLKIAKSDPPTLLTPSKWS 241
Query: 1041 CNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
RD +++A LD+NP++RP+ +QLL+
Sbjct: 242 VEFRD----FLKIA---LDKNPETRPS---AAQLLE 267
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound
To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 (Lok)
Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10 (Lok)
Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 78/276 (28%), Positives = 136/276 (49%), Gaps = 40/276 (14%)
Query: 814 IGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G G G VY+A+ +G + A K + E+ ++++ E++ L H IVK G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL---EDYIVEIEILATCDHPYIVKLLG 83
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
H +I+ E+ G++ I+ L Q V + + +AL++LH+ I
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLELDRG--LTEPQIQVVCRQMLEALNFLHSK---RI 138
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGIS-KSLKPDSSNWTELAGTIGYVAPELAY--TMKVT 989
++RD+ + NVL+ LE + ++DFG+S K+LK GT ++APE+ TMK T
Sbjct: 139 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR-DSFIGTPYWMAPEVVMCETMKDT 197
Query: 990 E---KSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILD---PRLPAP---S 1040
K+D++S G+ +E + + P ++ + R L +I P L P S
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEPPHHELNPM--------RVLLKIAKSDPPTLLTPSKWS 249
Query: 1041 CNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
RD +++A LD+NP++RP+ +QLL+
Sbjct: 250 VEFRD----FLKIA---LDKNPETRPS---AAQLLE 275
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24)
Length = 304
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 117/265 (44%), Gaps = 21/265 (7%)
Query: 808 FDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
F + IG G G V++ + + ++VA+K L ++ E+ L++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
+ K+YG +I+ EYL GS +L E TQ +++ + L YLH+
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDE----TQIATILREILKGLDYLHS 122
Query: 927 DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTM 986
+ ++RDI + NVLL E ++DFG++ L GT ++APE+
Sbjct: 123 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS 179
Query: 987 KVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDK 1046
K+D++S G+ A+E +G+ P + + + L I P N
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHSELHPM--------KVLFLIPKNNPPTLEGNYSKP 231
Query: 1047 LISIMEVAISCLDENPDSRPTMQKV 1071
L +E +CL++ P RPT +++
Sbjct: 232 LKEFVE---ACLNKEPSFRPTAKEL 253
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24)
In Complex With Staurosporine
Length = 304
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 117/265 (44%), Gaps = 21/265 (7%)
Query: 808 FDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
F + IG G G V++ + + ++VA+K L ++ E+ L++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
+ K+YG +I+ EYL GS +L E TQ +++ + L YLH+
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDE----TQIATILREILKGLDYLHS 122
Query: 927 DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTM 986
+ ++RDI + NVLL E ++DFG++ L GT ++APE+
Sbjct: 123 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS 179
Query: 987 KVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDK 1046
K+D++S G+ A+E +G+ P + + + L I P N
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHSELHPM--------KVLFLIPKNNPPTLEGNYSKP 231
Query: 1047 LISIMEVAISCLDENPDSRPTMQKV 1071
L +E +CL++ P RPT +++
Sbjct: 232 LKEFVE---ACLNKEPSFRPTAKEL 253
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 74.3 bits (181), Expect = 4e-13, Method: Composition-based stats.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG+G G+VY+ + V + K P + Q F NEV L + RH NI+ F G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQF---QAFRNEVAVLRKTRHVNILLFMGY 100
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
+ + IV ++ E SL L + ++ Q +++ + A + YLH I+
Sbjct: 101 MTKDNLA-IVTQWCEGSSLYKHLHVQETKFQM--FQLIDIARQTAQGMDYLHAK---NII 154
Query: 934 YRDISSKNVLLDLEYEAHVSDFGIS--KSLKPDSSNWTELAGTIGYVAPELAYTMK---V 988
+RD+ S N+ L + DFG++ KS S + G++ ++APE+
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 989 TEKSDVYSFGVLALEAIKGKHPRDFISS 1016
+ +SDVYS+G++ E + G+ P I++
Sbjct: 215 SFQSDVYSYGIVLYELMTGELPYSHINN 242
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 115/270 (42%), Gaps = 24/270 (8%)
Query: 814 IGTGGQGSVYRAELS--SGEIV--AVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVK 869
+G G G V R E SG+ V AVK +LS+ +F+ EV ++ + HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
YG +V E +GSL L LG R V VA+ + YL + F
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 142
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT---ELAGTIGYVAPELAYTM 986
++RD++++N+LL + DFG+ ++L + + + APE T
Sbjct: 143 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 987 KVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRD 1045
+ SD + FGV E G+ P I S + +D+ RLP P +D
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEPW-----IGLNGSQILHKIDK-EGERLPRPEDCPQD 253
Query: 1046 KLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
I V + C P+ RPT + L
Sbjct: 254 ----IYNVMVQCWAHKPEDRPTFVALRDFL 279
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 115/270 (42%), Gaps = 24/270 (8%)
Query: 814 IGTGGQGSVYRAELS--SGEIV--AVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVK 869
+G G G V R E SG+ V AVK +LS+ +F+ EV ++ + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
YG +V E +GSL L LG R V VA+ + YL + F
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 132
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT---ELAGTIGYVAPELAYTM 986
++RD++++N+LL + DFG+ ++L + + + APE T
Sbjct: 133 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 987 KVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRD 1045
+ SD + FGV E G+ P I S + +D+ RLP P +D
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPW-----IGLNGSQILHKIDK-EGERLPRPEDCPQD 243
Query: 1046 KLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
I V + C P+ RPT + L
Sbjct: 244 ----IYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 129/269 (47%), Gaps = 20/269 (7%)
Query: 806 NDFDEEHCIGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+DF++ +G G G V++ + SG ++A K H L + + + + E++ L E
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 82
Query: 865 RNIVKFYG-FCSHARHSFIVYEYLEMGSLAMILSNATS-AEELGWTQRMNVIKGVADALS 922
IV FYG F S S I E+++ GSL +L A E++ + VIKG L+
Sbjct: 83 PYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LT 137
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
YL I++RD+ N+L++ E + DFG+S L +N GT Y++PE
Sbjct: 138 YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPER 193
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
+ +SD++S G+ +E G++P S + LD ++E P+LP+ +
Sbjct: 194 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNE-PPPKLPSGVFS 252
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
+ + CL +NP R ++++
Sbjct: 253 -----LEFQDFVNKCLIKNPAERADLKQL 276
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 73.6 bits (179), Expect = 5e-13, Method: Composition-based stats.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 25/266 (9%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G V+ ++ VAVK +S Q FL E + ++H +V+ Y
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS----VQAFLEEANLMKTLQHDKLVRLYAV 75
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
+ +I+ E++ GSL L + + L + ++ +A+ ++Y+ + +
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY---I 131
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-TIGYVAPELAYTMKVTEKS 992
+RD+ + NVL+ ++DFG+++ ++ + E A I + APE T KS
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 993 DVYSFGVLALEAI---KGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLIS 1049
+V+SFG+L E + K +P + + S S R PR+ N D+L
Sbjct: 192 NVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRM------PRME----NCPDELYD 241
Query: 1050 IMEVAISCLDENPDSRPTMQKVSQLL 1075
IM++ C E + RPT + +L
Sbjct: 242 IMKM---CWKEKAEERPTFDYLQSVL 264
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 73.2 bits (178), Expect = 7e-13, Method: Composition-based stats.
Identities = 74/277 (26%), Positives = 125/277 (45%), Gaps = 36/277 (12%)
Query: 818 GQGSVYRAEL--------SSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVK 869
G+G + EL ++GE VAVK S + E++ L + H NIVK
Sbjct: 18 GEGHFGKVELCRYDPEGDNTGEQVAVKSLKPE--SGGNHIADLKKEIEILRNLYHENIVK 75
Query: 870 FYGFCSHARHSFI--VYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ G C+ + I + E+L GSL L + ++ Q++ + + YL +
Sbjct: 76 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPK--NKNKINLKQQLKYAVQICKGMDYLGSR 133
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT---ELAGTIGYVAPELAY 984
+ V+RD++++NVL++ E++ + DFG++K+++ D T + + + APE
Sbjct: 134 QY---VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 985 TMKVTEKSDVYSFGVLALEAI----KGKHPRD-FISSICSTS-----SNLDRTLDEILDP 1034
K SDV+SFGV E + P F+ I T + L TL E
Sbjct: 191 QSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKE--GK 248
Query: 1035 RLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RLP P N D++ +M C + P +R + Q +
Sbjct: 249 RLPCPP-NCPDEVYQLMR---KCWEFQPSNRTSFQNL 281
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 73.2 bits (178), Expect = 7e-13, Method: Composition-based stats.
Identities = 74/277 (26%), Positives = 125/277 (45%), Gaps = 36/277 (12%)
Query: 818 GQGSVYRAEL--------SSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVK 869
G+G + EL ++GE VAVK S + E++ L + H NIVK
Sbjct: 30 GEGHFGKVELCRYDPEGDNTGEQVAVKSLKPE--SGGNHIADLKKEIEILRNLYHENIVK 87
Query: 870 FYGFCSHARHSFI--VYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ G C+ + I + E+L GSL L + ++ Q++ + + YL +
Sbjct: 88 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPK--NKNKINLKQQLKYAVQICKGMDYLGSR 145
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT---ELAGTIGYVAPELAY 984
+ V+RD++++NVL++ E++ + DFG++K+++ D T + + + APE
Sbjct: 146 QY---VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 985 TMKVTEKSDVYSFGVLALEAI----KGKHPRD-FISSICSTS-----SNLDRTLDEILDP 1034
K SDV+SFGV E + P F+ I T + L TL E
Sbjct: 203 QSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKE--GK 260
Query: 1035 RLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RLP P N D++ +M C + P +R + Q +
Sbjct: 261 RLPCPP-NCPDEVYQLMR---KCWEFQPSNRTSFQNL 293
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 69/238 (28%), Positives = 116/238 (48%), Gaps = 44/238 (18%)
Query: 817 GGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSH 876
G G V++A+L + E VAVK F P+ + + Q E+ EV SL ++H NI++F G +
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIF--PIQDKQSWQNEY--EVYSLPGMKHENILQFIG--AE 87
Query: 877 ARHS------FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDC-- 928
R + +++ + E GSL S+ A + W + ++ + +A L+YLH D
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSL----SDFLKANVVSWNELCHIAETMARGLAYLHEDIPG 143
Query: 929 -----FPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSS--NWTELAGTIGYVAPE 981
P I +RDI SKNVLL A ++DFG++ + S + GT Y+APE
Sbjct: 144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203
Query: 982 -----LAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDP 1034
+ + + D+Y+ G++ E ++S C+ + D +DE + P
Sbjct: 204 VLEGAINFQRDAFLRIDMYAMGLVLWE----------LASRCTAA---DGPVDEYMLP 248
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated
Protein Kinase Alpha-2 Subunit Mutant (T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 9/200 (4%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+GT G+ + +L+ G VAVK + + + + E+++L RH +I+K Y
Sbjct: 21 VGTFGKVKIGEHQLT-GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S F+V EY+ G L + EE+ + + + + A+ Y H +V
Sbjct: 80 ISTPTDFFMVMEYVSGGELFDYICKHGRVEEM---EARRLFQQILSAVDYCHRHM---VV 133
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPE-LAYTMKVTEKS 992
+RD+ +NVLLD A ++DFG+S ++ D + G+ Y APE ++ + +
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLS-NMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEV 192
Query: 993 DVYSFGVLALEAIKGKHPRD 1012
D++S GV+ + G P D
Sbjct: 193 DIWSCGVILYALLCGTLPFD 212
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 128/268 (47%), Gaps = 24/268 (8%)
Query: 811 EHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
E +G G G V+ A + VAVK +S + FL E + ++H +VK
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS----VEAFLAEANVMKTLQHDKLVKL 248
Query: 871 YGFCSHARHSFIVYEYLEMGSLAMIL-SNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
+ + +I+ E++ GSL L S+ S + L + ++ +A+ ++++ +
Sbjct: 249 HAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRNY 305
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG-TIGYVAPELAYTMKV 988
++RD+ + N+L+ ++DFG+++ ++ + E A I + APE
Sbjct: 306 ---IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSF 362
Query: 989 TEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKL 1047
T KSDV+SFG+L +E + G+ P +S + + R L+ R+P P N ++L
Sbjct: 363 TIKSDVWSFGILLMEIVTYGRIPYPGMS-----NPEVIRALERGY--RMPRPE-NCPEEL 414
Query: 1048 ISIMEVAISCLDENPDSRPTMQKVSQLL 1075
+IM + C P+ RPT + + +L
Sbjct: 415 YNIM---MRCWKNRPEERPTFEYIQSVL 439
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 74/301 (24%), Positives = 136/301 (45%), Gaps = 35/301 (11%)
Query: 793 DRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAELS---SGEIVAVKKFHSPLLSEMTCQ 849
D + ++ ++ D E H G+ S+Y + + +GE+VAVK + + +
Sbjct: 24 DPTVFHKRYLKKIRDLGEGHF----GKVSLYCYDPTNDGTGEMVAVKALKADAGPQH--R 77
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFI--VYEYLEMGSLAMILSNATSAEELGW 907
+ E+ L + H +I+K+ G C A + + V EY+ +GSL L + +G
Sbjct: 78 SGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS----IGL 133
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN 967
Q + + + + ++YLH + ++RD++++NVLLD + + DFG++K++
Sbjct: 134 AQLLLFAQQICEGMAYLHAQHY---IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEX 190
Query: 968 W---TELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAI-----KGKHPRDFISSICS 1019
+ + + + APE K SDV+SFGV E + P F+ I
Sbjct: 191 YRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGI 250
Query: 1020 TSSNLD-RTLDEILD--PRLPAPSCNIRDKL-ISIMEVAISCLDENPDSRPTMQKVSQLL 1075
+ L E+L+ RLP P DK + + +C + RPT + + +L
Sbjct: 251 AQGQMTVLRLTELLERGERLPRP-----DKCPAEVYHLMKNCWETEASFRPTFENLIPIL 305
Query: 1076 K 1076
K
Sbjct: 306 K 306
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 808 FDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
F+ + +GTG V AE ++G++ AVK L E NE+ L +I+H N
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIE--NEIAVLRKIKHEN 81
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSL-AMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
IV H ++V + + G L I+ E+ T +I+ V DA+ YLH
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAST----LIRQVLDAVYYLH 137
Query: 926 NDCFPPIVYRDISSKNVLL---DLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
IV+RD+ +N+L D E + +SDFG+SK ++ + GT GYVAPE+
Sbjct: 138 R---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSK-MEGKGDVMSTACGTPGYVAPEV 193
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
++ D +S GV+A + G P
Sbjct: 194 LAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 14/207 (6%)
Query: 808 FDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
F + IG G G+VY A ++ + E+VA+KK Q+ + EV+ L ++RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
+++ G +++V EY +GS + +L + L + V G L+YLH+
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC-LGSASDLLE--VHKKPLQEVEIAAVTHGALQGLAYLHS 133
Query: 927 DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTM 986
+++RD+ + N+LL + DFG + + P + GT ++APE+ M
Sbjct: 134 H---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILAM 186
Query: 987 KVTE---KSDVYSFGVLALEAIKGKHP 1010
+ K DV+S G+ +E + K P
Sbjct: 187 DEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex
With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex
With Ch4858061 And Mgatp
Length = 307
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 127/271 (46%), Gaps = 18/271 (6%)
Query: 806 NDFDEEHCIGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+DF++ +G G G V++ + SG ++A K H L + + + + E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 63
Query: 865 RNIVKFYG-FCSHARHSFIVYEYLEMGSLAMILSNATS-AEELGWTQRMNVIKGVADALS 922
IV FYG F S S I E+++ GSL +L A E++ + VIKG L+
Sbjct: 64 PYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LT 118
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
YL I++RD+ N+L++ E + DFG+S L +N GT Y++PE
Sbjct: 119 YLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPER 174
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCN 1042
+ +SD++S G+ +E G++P S + E+LD + P
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYP--IPPPDAKEDSRPPMAIFELLDYIVNEPPPK 232
Query: 1043 IRDKLISI--MEVAISCLDENPDSRPTMQKV 1071
+ + S+ + CL +NP R ++++
Sbjct: 233 LPSGVFSLEFQDFVNKCLIKNPAERADLKQL 263
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
Length = 348
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 14/207 (6%)
Query: 808 FDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
F + IG G G+VY A ++ + E+VA+KK Q+ + EV+ L ++RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
+++ G +++V EY +GS + +L + L + V G L+YLH+
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC-LGSASDLLE--VHKKPLQEVEIAAVTHGALQGLAYLHS 172
Query: 927 DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTM 986
+++RD+ + N+LL + DFG + + P + GT ++APE+ M
Sbjct: 173 H---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILAM 225
Query: 987 KVTE---KSDVYSFGVLALEAIKGKHP 1010
+ K DV+S G+ +E + K P
Sbjct: 226 DEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 74/302 (24%), Positives = 138/302 (45%), Gaps = 37/302 (12%)
Query: 793 DRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAELS---SGEIVAVKKFHSPLLSEMTCQ 849
D + ++ ++ D E H G+ S+Y + + +GE+VAVK + + +
Sbjct: 7 DPTVFHKRYLKKIRDLGEGHF----GKVSLYCYDPTNDGTGEMVAVKALKADCGPQH--R 60
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCS-HARHSF-IVYEYLEMGSLAMILSNATSAEELGW 907
+ E+ L + H +I+K+ G C S +V EY+ +GSL L + +G
Sbjct: 61 SGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS----IGL 116
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN 967
Q + + + + ++YLH+ + ++R+++++NVLLD + + DFG++K++ P+
Sbjct: 117 AQLLLFAQQICEGMAYLHSQHY---IHRNLAARNVLLDNDRLVKIGDFGLAKAV-PEGHE 172
Query: 968 WTELA----GTIGYVAPELAYTMKVTEKSDVYSFGVLALEAI-----KGKHPRDFISSIC 1018
+ + + + APE K SDV+SFGV E + P F+ I
Sbjct: 173 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIG 232
Query: 1019 STSSNLD-RTLDEILD--PRLPAPSCNIRDKL-ISIMEVAISCLDENPDSRPTMQKVSQL 1074
+ L E+L+ RLP P DK + + +C + RPT + + +
Sbjct: 233 IAQGQMTVLRLTELLERGERLPRP-----DKCPCEVYHLMKNCWETEASFRPTFENLIPI 287
Query: 1075 LK 1076
LK
Sbjct: 288 LK 289
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein
Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain)
Length = 276
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 9/200 (4%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+GT G+ + +L+ G VAVK + + + + E+++L RH +I+K Y
Sbjct: 21 VGTFGKVKIGEHQLT-GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
S F+V EY+ G L + EE+ + + + + A+ Y H +V
Sbjct: 80 ISTPTDFFMVMEYVSGGELFDYICKHGRVEEM---EARRLFQQILSAVDYCHRHM---VV 133
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPE-LAYTMKVTEKS 992
+RD+ +NVLLD A ++DFG+S ++ D G+ Y APE ++ + +
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLS-NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEV 192
Query: 993 DVYSFGVLALEAIKGKHPRD 1012
D++S GV+ + G P D
Sbjct: 193 DIWSCGVILYALLCGTLPFD 212
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 68/269 (25%), Positives = 126/269 (46%), Gaps = 31/269 (11%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQ---EFLNEVKSLTEIRHRNIVK 869
+G+G G+VY+ + GE V + +L+E T + EF++E + + H ++V+
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIP-VAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 104
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
G C +V + + G L + + +G +N +A + YL
Sbjct: 105 LLGVCLSPTIQ-LVTQLMPHGCLLEYVHE--HKDNIGSQLLLNWCVQIAKGMMYLEER-- 159
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVAPELAYTMK 987
+V+RD++++NVL+ ++DFG+++ L+ D + G I ++A E + K
Sbjct: 160 -RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRK 218
Query: 988 VTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDP--RLPAPS-CNI 1043
T +SDV+S+GV E + G P D I + R + ++L+ RLP P C
Sbjct: 219 FTHQSDVWSYGVTIWELMTFGGKPYDGIPT---------REIPDLLEKGERLPQPPICT- 268
Query: 1044 RDKLISIMEVAISCLDENPDSRPTMQKVS 1072
I + V + C + DSRP ++++
Sbjct: 269 ----IDVYMVMVKCWMIDADSRPKFKELA 293
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 68/269 (25%), Positives = 126/269 (46%), Gaps = 31/269 (11%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQ---EFLNEVKSLTEIRHRNIVK 869
+G+G G+VY+ + GE V + +L+E T + EF++E + + H ++V+
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIP-VAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
G C +V + + G L + + +G +N +A + YL
Sbjct: 82 LLGVCLSPTIQ-LVTQLMPHGCLLEYVHE--HKDNIGSQLLLNWCVQIAKGMMYLEER-- 136
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVAPELAYTMK 987
+V+RD++++NVL+ ++DFG+++ L+ D + G I ++A E + K
Sbjct: 137 -RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRK 195
Query: 988 VTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDP--RLPAPS-CNI 1043
T +SDV+S+GV E + G P D I + R + ++L+ RLP P C
Sbjct: 196 FTHQSDVWSYGVTIWELMTFGGKPYDGIPT---------REIPDLLEKGERLPQPPICT- 245
Query: 1044 RDKLISIMEVAISCLDENPDSRPTMQKVS 1072
I + V + C + DSRP ++++
Sbjct: 246 ----IDVYMVMVKCWMIDADSRPKFKELA 270
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 70.9 bits (172), Expect = 4e-12, Method: Composition-based stats.
Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 19/217 (8%)
Query: 800 EIVRATNDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKS 858
E +R DF + +GTG V AE + ++VA+K L E NE+
Sbjct: 14 EDIRDIYDFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSME--NEIAV 69
Query: 859 LTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQR--MNVIKG 916
L +I+H NIV H +++ + + G L + E+ +T+R +I
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-----VEKGFYTERDASRLIFQ 124
Query: 917 VADALSYLHNDCFPPIVYRDISSKNVL---LDLEYEAHVSDFGISKSLKPDSSNWTELAG 973
V DA+ YLH+ IV+RD+ +N+L LD + + +SDFG+SK P S T G
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CG 180
Query: 974 TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
T GYVAPE+ ++ D +S GV+A + G P
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 70.5 bits (171), Expect = 4e-12, Method: Composition-based stats.
Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 19/217 (8%)
Query: 800 EIVRATNDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKS 858
E +R DF + +GTG V AE + ++VA+K L E NE+
Sbjct: 14 EDIRDIYDFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME--NEIAV 69
Query: 859 LTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQR--MNVIKG 916
L +I+H NIV H +++ + + G L + E+ +T+R +I
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-----VEKGFYTERDASRLIFQ 124
Query: 917 VADALSYLHNDCFPPIVYRDISSKNVL---LDLEYEAHVSDFGISKSLKPDSSNWTELAG 973
V DA+ YLH+ IV+RD+ +N+L LD + + +SDFG+SK P S T G
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CG 180
Query: 974 TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
T GYVAPE+ ++ D +S GV+A + G P
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 70.5 bits (171), Expect = 4e-12, Method: Composition-based stats.
Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 19/217 (8%)
Query: 800 EIVRATNDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKS 858
E +R DF + +GTG V AE + ++VA+K L E NE+
Sbjct: 14 EDIRDIYDFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME--NEIAV 69
Query: 859 LTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQR--MNVIKG 916
L +I+H NIV H +++ + + G L + E+ +T+R +I
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-----VEKGFYTERDASRLIFQ 124
Query: 917 VADALSYLHNDCFPPIVYRDISSKNVL---LDLEYEAHVSDFGISKSLKPDSSNWTELAG 973
V DA+ YLH+ IV+RD+ +N+L LD + + +SDFG+SK P S T G
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CG 180
Query: 974 TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
T GYVAPE+ ++ D +S GV+A + G P
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 70.5 bits (171), Expect = 4e-12, Method: Composition-based stats.
Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 19/217 (8%)
Query: 800 EIVRATNDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKS 858
E +R DF + +GTG V AE + ++VA+K L E NE+
Sbjct: 14 EDIRDIYDFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME--NEIAV 69
Query: 859 LTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQR--MNVIKG 916
L +I+H NIV H +++ + + G L + E+ +T+R +I
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-----VEKGFYTERDASRLIFQ 124
Query: 917 VADALSYLHNDCFPPIVYRDISSKNVL---LDLEYEAHVSDFGISKSLKPDSSNWTELAG 973
V DA+ YLH+ IV+RD+ +N+L LD + + +SDFG+SK P S T G
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CG 180
Query: 974 TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
T GYVAPE+ ++ D +S GV+A + G P
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 70.5 bits (171), Expect = 4e-12, Method: Composition-based stats.
Identities = 74/302 (24%), Positives = 137/302 (45%), Gaps = 37/302 (12%)
Query: 793 DRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAELS---SGEIVAVKKFHSPLLSEMTCQ 849
D + ++ ++ D E H G+ S+Y + + +GE+VAVK + + +
Sbjct: 7 DPTVFHKRYLKKIRDLGEGHF----GKVSLYCYDPTNDGTGEMVAVKALKADCGPQH--R 60
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCS-HARHSF-IVYEYLEMGSLAMILSNATSAEELGW 907
+ E+ L + H +I+K+ G C S +V EY+ +GSL L + +G
Sbjct: 61 SGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS----IGL 116
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN 967
Q + + + + ++YLH + ++R+++++NVLLD + + DFG++K++ P+
Sbjct: 117 AQLLLFAQQICEGMAYLHAQHY---IHRNLAARNVLLDNDRLVKIGDFGLAKAV-PEGHE 172
Query: 968 WTELA----GTIGYVAPELAYTMKVTEKSDVYSFGVLALEAI-----KGKHPRDFISSIC 1018
+ + + + APE K SDV+SFGV E + P F+ I
Sbjct: 173 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIG 232
Query: 1019 STSSNLD-RTLDEILD--PRLPAPSCNIRDKL-ISIMEVAISCLDENPDSRPTMQKVSQL 1074
+ L E+L+ RLP P DK + + +C + RPT + + +
Sbjct: 233 IAQGQMTVLRLTELLERGERLPRP-----DKCPCEVYHLMKNCWETEASFRPTFENLIPI 287
Query: 1075 LK 1076
LK
Sbjct: 288 LK 289
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 70.5 bits (171), Expect = 5e-12, Method: Composition-based stats.
Identities = 65/276 (23%), Positives = 119/276 (43%), Gaps = 21/276 (7%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
+F E IG G VYRA L G VA+KK L + + + + E+ L ++ H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRM-NVIKGVADALSYL 924
N++K+Y IV E + G L+ ++ + + L + + + AL ++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ +++RDI NV + + D G+ + ++ L GT Y++PE +
Sbjct: 153 HSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 209
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP----RDFISSICSTSSNLDRTLDEILDPRLPAPS 1040
KSD++S G L E + P + + S+C D P PS
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP---------PLPS 260
Query: 1041 CNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
+ ++L ++ + C++ +P+ RP + V + K
Sbjct: 261 DHYSEELRQLVNM---CINPDPEKRPDVTYVYDVAK 293
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 20/201 (9%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG G G VY+A+ + GE A+KK E + E+ L E++H NIVK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDE-GIPSTTIREISILKELKHSNIVKLYDV 68
Query: 874 CSHARHSFIVYEYLEMGSLAMI------LSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +V+E+L+ ++ L + T+ L + ++ G+A Y H+
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL-----LQLLNGIA----YCHDR 119
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPE-LAYTM 986
+++RD+ +N+L++ E E ++DFG++++ +T T+ Y AP+ L +
Sbjct: 120 ---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 987 KVTEKSDVYSFGVLALEAIKG 1007
K + D++S G + E + G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 70.5 bits (171), Expect = 5e-12, Method: Composition-based stats.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+DF+ +G G G V + + SG I+A K H L + + + + E++ L E
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIH--LEIKPAIRNQIIRELQVLHECNS 73
Query: 865 RNIVKFYG-FCSHARHSFIVYEYLEMGSLAMILSNATS-AEELGWTQRMNVIKGVADALS 922
IV FYG F S S I E+++ GSL +L A EE+ + V++G L+
Sbjct: 74 PYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRG----LA 128
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
YL I++RD+ N+L++ E + DFG+S L +N GT Y+APE
Sbjct: 129 YLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMAPER 184
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ +SD++S G+ +E G++P
Sbjct: 185 LQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 20/201 (9%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG G G VY+A+ + GE A+KK E + E+ L E++H NIVK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDE-GIPSTTIREISILKELKHSNIVKLYDV 68
Query: 874 CSHARHSFIVYEYLEMGSLAMI------LSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +V+E+L+ ++ L + T+ L + ++ G+A Y H+
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL-----LQLLNGIA----YCHDR 119
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPE-LAYTM 986
+++RD+ +N+L++ E E ++DFG++++ +T T+ Y AP+ L +
Sbjct: 120 ---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 987 KVTEKSDVYSFGVLALEAIKG 1007
K + D++S G + E + G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 14/208 (6%)
Query: 806 NDFDEEHCIGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+DF++ +G G G V++ + SG ++A K H L + + + + E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 63
Query: 865 RNIVKFYG-FCSHARHSFIVYEYLEMGSLAMILSNATS-AEELGWTQRMNVIKGVADALS 922
IV FYG F S S I E+++ GSL +L A E++ + VIKG L+
Sbjct: 64 PYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LT 118
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
YL I++RD+ N+L++ E + DFG+S L +N GT Y++PE
Sbjct: 119 YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPER 174
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ +SD++S G+ +E G++P
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 14/208 (6%)
Query: 806 NDFDEEHCIGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+DF++ +G G G V++ + SG ++A K H L + + + + E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 63
Query: 865 RNIVKFYG-FCSHARHSFIVYEYLEMGSLAMILSNATS-AEELGWTQRMNVIKGVADALS 922
IV FYG F S S I E+++ GSL +L A E++ + VIKG L+
Sbjct: 64 PYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LT 118
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
YL I++RD+ N+L++ E + DFG+S L +N GT Y++PE
Sbjct: 119 YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPER 174
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ +SD++S G+ +E G++P
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 131/264 (49%), Gaps = 25/264 (9%)
Query: 416 FGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQGPIPDLRNLTRLARVRLD 475
NLT ++ + + +N ++ P NL LT L L NQ+ P L+NLT L R+ L
Sbjct: 81 LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP-LKNLTNLNRLELS 137
Query: 476 RNHLTGNISESFGIHSNLSYINLSHKKFYGEISFDWGKFPNLGTL---DVSANNITGILP 532
N ++ +IS G+ S L +N S + D NL TL D+S+N ++ I
Sbjct: 138 SNTIS-DISALSGLTS-LQQLNFSSNQVT-----DLKPLANLTTLERLDISSNKVSDI-- 188
Query: 533 PEIGDSPQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHL 592
+ L+ L ++N I P LG L +L +L+LN NQ L SL L L
Sbjct: 189 SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDL 244
Query: 593 DLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIP 652
DL++N++SN P L L KL L L NQ S P L L++L+L+ N L E+I
Sbjct: 245 DLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDI- 298
Query: 653 SQVCSMQSLEKLNLAHNNLSGFIP 676
S + ++++L L L NN+S P
Sbjct: 299 SPISNLKNLTYLTLYFNNISDISP 322
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 137/296 (46%), Gaps = 40/296 (13%)
Query: 104 FSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYL 163
++ +L L L NQI I P + N + L L+LSSN+ S + L+ L+ L
Sbjct: 103 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLNF 158
Query: 164 STNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSE 223
S+NQ + P + +L+ L+ L + N +S L LTNL + NN +S P
Sbjct: 159 SSNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP-- 212
Query: 224 IGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILNL 283
+G L +L L L N+L +L +L NL LDL +N +S PLS LT L L L
Sbjct: 213 LGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISNLAPLS--GLTKLTELKL 268
Query: 284 PHNSLSGSIP--------------------SEMGNLKSLYGLGLSFNKLSGSIPSSLGNL 323
N +S P S + NLK+L L L FN +S P S +L
Sbjct: 269 GANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVS--SL 326
Query: 324 TKLTILYLSDNLLFGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYL 379
TKL L+ +N + S + NL + +L G N++S P L NLT + L L
Sbjct: 327 TKLQRLFFYNNKV--SDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGL 378
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 159/352 (45%), Gaps = 55/352 (15%)
Query: 155 LSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNN 214
L+ L + S NQ + P + +L+ L + + N ++ P L NLTNL + L+NN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 215 SLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGN 274
++ P + NL +L+ LEL N +S LS L +L L+ N ++ PL N
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISDISALS--GLTSLQQLNFSSNQVTDLKPL--AN 171
Query: 275 LTNLDILNLPHNSLSG-SIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSD 333
LT L+ L++ N +S S+ +++ NL+SL + N++S P LG LT L L L+
Sbjct: 172 LTTLERLDISSNKVSDISVLAKLTNLESLIA---TNNQISDITP--LGILTNLDELSLNG 226
Query: 334 NLL--FGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGSIPSE 391
N L G+ + +L L L+L +N++S P L LT L L L N +S P
Sbjct: 227 NQLKDIGT----LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-- 278
Query: 392 IXXXXXXXXXXXXXXXXXXXIPYSFGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVL 451
LT + L + N L P NL LT L L
Sbjct: 279 ------------------------LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTL 312
Query: 452 SYNQLQGPIPDLRNLTRLARVRLDRNHLTGNISESFGIHSNLSYINLSHKKF 503
+N + P + +LT+L R+ N ++ S +N+++++ H +
Sbjct: 313 YFNNISDISP-VSSLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQI 361
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 14/208 (6%)
Query: 806 NDFDEEHCIGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+DF++ +G G G V++ + SG ++A K H L + + + + E++ L E
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 125
Query: 865 RNIVKFYG-FCSHARHSFIVYEYLEMGSLAMILSNATS-AEELGWTQRMNVIKGVADALS 922
IV FYG F S S I E+++ GSL +L A E++ + VIKG L+
Sbjct: 126 PYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LT 180
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
YL I++RD+ N+L++ E + DFG+S L +N GT Y++PE
Sbjct: 181 YLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPER 236
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ +SD++S G+ +E G++P
Sbjct: 237 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
Length = 333
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 14/208 (6%)
Query: 806 NDFDEEHCIGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+DF++ +G G G V++ + SG ++A K H L + + + + E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 63
Query: 865 RNIVKFYG-FCSHARHSFIVYEYLEMGSLAMILSNATS-AEELGWTQRMNVIKGVADALS 922
IV FYG F S S I E+++ GSL +L A E++ + VIKG L+
Sbjct: 64 PYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LT 118
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
YL I++RD+ N+L++ E + DFG+S L +N GT Y++PE
Sbjct: 119 YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPER 174
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ +SD++S G+ +E G++P
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212 Interactions
Length = 341
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 14/208 (6%)
Query: 806 NDFDEEHCIGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+DF++ +G G G V++ + SG ++A K H L + + + + E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 63
Query: 865 RNIVKFYG-FCSHARHSFIVYEYLEMGSLAMILSNATS-AEELGWTQRMNVIKGVADALS 922
IV FYG F S S I E+++ GSL +L A E++ + VIKG L+
Sbjct: 64 PYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LT 118
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
YL I++RD+ N+L++ E + DFG+S L +N GT Y++PE
Sbjct: 119 YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPER 174
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ +SD++S G+ +E G++P
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5-
Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)
Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor A-
443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of 4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 806 NDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
NDFD +G G G V E ++G A+K ++ + E + L RH
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 865 RNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKG--VADAL 921
+ Y F +H R F++ EY G L LS E +T+ G + AL
Sbjct: 70 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHLS-----RERVFTEERARFYGAEIVSAL 123
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPE 981
YLH+ +VYRDI +N++LD + ++DFG+ K D + GT Y+APE
Sbjct: 124 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 180
Query: 982 LAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ D + GV+ E + G+ P
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase In
Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase In
Complex With Arq 197
Length = 318
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 32/270 (11%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPL-----LSEMTCQQEFLNEVKSLTEIRHRNIV 868
IG G G VY L + KK H + ++++ +FL E + + H N++
Sbjct: 56 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 869 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
G C + S +V Y++ G L + N T + + VA + YL +
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 170
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS----SNWTELAGTIGYVAPELA 983
F V+RD++++N +LD ++ V+DFG+++ + N T + ++A E
Sbjct: 171 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 227
Query: 984 YTMKVTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPR-LPAPSC 1041
T K T KSDV+SFGVL E + +G P +++ T L +L P P P
Sbjct: 228 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEYCPDP-- 283
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
+ EV + C + RP+ ++
Sbjct: 284 --------LYEVMLKCWHPKAEMRPSFSEL 305
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 806 NDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
NDFD +G G G V E ++G A+K ++ + E + L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 865 RNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKG--VADAL 921
+ Y F +H R F++ EY G L LS E +T+ G + AL
Sbjct: 65 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHLS-----RERVFTEERARFYGAEIVSAL 118
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPE 981
YLH+ +VYRDI +N++LD + ++DFG+ K D + GT Y+APE
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 982 LAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ D + GV+ E + G+ P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With
Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 806 NDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
NDFD +G G G V E ++G A+K ++ + E + L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 865 RNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKG--VADAL 921
+ Y F +H R F++ EY G L LS E +T+ G + AL
Sbjct: 65 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHLS-----RERVFTEERARFYGAEIVSAL 118
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPE 981
YLH+ +VYRDI +N++LD + ++DFG+ K D + GT Y+APE
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 982 LAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ D + GV+ E + G+ P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 806 NDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
NDFD +G G G V E ++G A+K ++ + E + L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 865 RNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKG--VADAL 921
+ Y F +H R F++ EY G L LS E +T+ G + AL
Sbjct: 65 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHLS-----RERVFTEERARFYGAEIVSAL 118
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPE 981
YLH+ +VYRDI +N++LD + ++DFG+ K D + GT Y+APE
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 982 LAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ D + GV+ E + G+ P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIR-HRNIVKFY 871
+G G G V+++ + +GE+VAVKK + Q+ F E+ LTE+ H NIV
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHENIVNLL 75
Query: 872 GF--CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
+ R ++V++Y+E A+I +N L + V+ + + YLH+
Sbjct: 76 NVLRADNDRDVYLVFDYMETDLHAVIRANI-----LEPVHKQYVVYQLIKVIKYLHSGG- 129
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKS---------------------LKPDSSNW 968
+++RD+ N+LL+ E V+DFG+S+S D
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 969 TELAGTIGYVAPELAY-TMKVTEKSDVYSFGVLALEAIKGK 1008
T+ T Y APE+ + K T+ D++S G + E + GK
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 806 NDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
NDFD +G G G V E ++G A+K ++ + E + L RH
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 865 RNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKG--VADAL 921
+ Y F +H R F++ EY G L LS E +T+ G + AL
Sbjct: 68 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHLS-----RERVFTEERARFYGAEIVSAL 121
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPE 981
YLH+ +VYRDI +N++LD + ++DFG+ K D + GT Y+APE
Sbjct: 122 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 178
Query: 982 LAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ D + GV+ E + G+ P
Sbjct: 179 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 806 NDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
NDFD +G G G V E ++G A+K ++ + E + L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 865 RNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKG--VADAL 921
+ Y F +H R F++ EY G L LS E +T+ G + AL
Sbjct: 65 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHLS-----RERVFTEERARFYGAEIVSAL 118
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPE 981
YLH+ +VYRDI +N++LD + ++DFG+ K D + GT Y+APE
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 982 LAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ D + GV+ E + G+ P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 806 NDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
NDFD +G G G V E ++G A+K ++ + E + L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 865 RNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKG--VADAL 921
+ Y F +H R F++ EY G L LS E +T+ G + AL
Sbjct: 65 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHLS-----RERVFTEERARFYGAEIVSAL 118
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPE 981
YLH+ +VYRDI +N++LD + ++DFG+ K D + GT Y+APE
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 982 LAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ D + GV+ E + G+ P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 128/264 (48%), Gaps = 25/264 (9%)
Query: 416 FGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQGPIPDLRNLTRLARVRLD 475
NLT ++ + + +N ++ P NL LT L L NQ+ P L+NLT L R+ L
Sbjct: 81 LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP-LKNLTNLNRLELS 137
Query: 476 RNHLTGNISESFGIHSNLSYINLSHKKFYGEISFDWGKFPNLGTL---DVSANNITGILP 532
N ++ +IS G+ S L F D NL TL D+S+N ++ I
Sbjct: 138 SNTIS-DISALSGLTS------LQQLSFSSNQVTDLKPLANLTTLERLDISSNKVSDI-- 188
Query: 533 PEIGDSPQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHL 592
+ L+ L ++N I P LG L +L +L+LN NQ L SL L L
Sbjct: 189 SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDL 244
Query: 593 DLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIP 652
DL++N++SN P L L KL L L NQ S P L L++L+L+ N L E+I
Sbjct: 245 DLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDI- 298
Query: 653 SQVCSMQSLEKLNLAHNNLSGFIP 676
S + ++++L L L NN+S P
Sbjct: 299 SPISNLKNLTYLTLYFNNISDISP 322
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 137/296 (46%), Gaps = 40/296 (13%)
Query: 104 FSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYL 163
++ +L L L NQI I P + N + L L+LSSN+ S + L+ L+ L
Sbjct: 103 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSF 158
Query: 164 STNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSE 223
S+NQ + P + +L+ L+ L + N +S L LTNL + NN +S P
Sbjct: 159 SSNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP-- 212
Query: 224 IGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILNL 283
+G L +L L L N+L +L +L NL LDL +N +S PLS LT L L L
Sbjct: 213 LGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISNLAPLS--GLTKLTELKL 268
Query: 284 PHNSLSGSIP--------------------SEMGNLKSLYGLGLSFNKLSGSIPSSLGNL 323
N +S P S + NLK+L L L FN +S P S +L
Sbjct: 269 GANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVS--SL 326
Query: 324 TKLTILYLSDNLLFGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYL 379
TKL L+ +N + S + NL + +L G N++S P L NLT + L L
Sbjct: 327 TKLQRLFFYNNKV--SDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGL 378
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 150/368 (40%), Gaps = 87/368 (23%)
Query: 155 LSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNN 214
L+ L + S NQ + P + +L+ L + + N ++ P L NLTNL + L+NN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 215 SLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLS--------------------LGNLPNL 254
++ P + NL +L+ LEL N +S LS L NL L
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKPLANLTTL 175
Query: 255 ATLDLHDNSLSGSIPLS--------------------FGNLTNLDILNLPHNSLS--GSI 292
LD+ N +S L+ G LTNLD L+L N L G++
Sbjct: 176 ERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTL 235
Query: 293 PSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNLLFGSIPCEIGNLRYLFY 352
S L +L L L+ N++S P L LTKLT L L N + P + L L
Sbjct: 236 AS----LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTN 287
Query: 353 LELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGSIPSEIXXXXXXXXXXXXXXXXXXXI 412
LEL +N+L P + NL NL L L+ N +S P
Sbjct: 288 LELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP----------------------- 322
Query: 413 PYSFGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQGPIPDLRNLTRLARV 472
+LT + L Y+N +S NL + L +NQ+ P L NLTR+ ++
Sbjct: 323 ---VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP-LANLTRITQL 376
Query: 473 RLDRNHLT 480
L+ T
Sbjct: 377 GLNDQAWT 384
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 128/264 (48%), Gaps = 25/264 (9%)
Query: 416 FGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQGPIPDLRNLTRLARVRLD 475
NLT ++ + + +N ++ P NL LT L L NQ+ P L+NLT L R+ L
Sbjct: 81 LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP-LKNLTNLNRLELS 137
Query: 476 RNHLTGNISESFGIHSNLSYINLSHKKFYGEISFDWGKFPNLGTL---DVSANNITGILP 532
N ++ +IS G+ S L F D NL TL D+S+N ++ I
Sbjct: 138 SNTIS-DISALSGLTS------LQQLSFSSNQVTDLKPLANLTTLERLDISSNKVSDI-- 188
Query: 533 PEIGDSPQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHL 592
+ L+ L ++N I P LG L +L +L+LN NQ L SL L L
Sbjct: 189 SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDL 244
Query: 593 DLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIP 652
DL++N++SN P L L KL L L NQ S P L L++L+L+ N L E+I
Sbjct: 245 DLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDI- 298
Query: 653 SQVCSMQSLEKLNLAHNNLSGFIP 676
S + ++++L L L NN+S P
Sbjct: 299 SPISNLKNLTYLTLYFNNISDISP 322
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 140/297 (47%), Gaps = 42/297 (14%)
Query: 104 FSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYL 163
++ +L L L NQI I P + N + L L+LSSN+ S + L+ L+ L
Sbjct: 103 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSF 158
Query: 164 STNQFSGRIPPQIGHLSYLKALHLFENGLSG-SIPPSLGNLTNLAIMYLYNNSLSGSIPS 222
S+NQ + P + +L+ L+ L + N +S S+ L LTNL + NN +S P
Sbjct: 159 SSNQVTDLKP--LANLTTLERLDISSNKVSDISV---LAKLTNLESLIATNNQISDITP- 212
Query: 223 EIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILN 282
+G L +L L L N+L +L +L NL LDL +N +S PLS LT L L
Sbjct: 213 -LGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISNLAPLS--GLTKLTELK 267
Query: 283 LPHNSLSGSIP--------------------SEMGNLKSLYGLGLSFNKLSGSIPSSLGN 322
L N +S P S + NLK+L L L FN +S P S +
Sbjct: 268 LGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVS--S 325
Query: 323 LTKLTILYLSDNLLFGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYL 379
LTKL L+ S+N + S + NL + +L G N++S P L NLT + L L
Sbjct: 326 LTKLQRLFFSNNKV--SDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGL 378
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 158/352 (44%), Gaps = 55/352 (15%)
Query: 155 LSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNN 214
L+ L + S NQ + P + +L+ L + + N ++ P L NLTNL + L+NN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 215 SLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGN 274
++ P + NL +L+ LEL N +S LS L +L L N ++ PL N
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISDISALS--GLTSLQQLSFSSNQVTDLKPL--AN 171
Query: 275 LTNLDILNLPHNSLSG-SIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSD 333
LT L+ L++ N +S S+ +++ NL+SL + N++S P LG LT L L L+
Sbjct: 172 LTTLERLDISSNKVSDISVLAKLTNLESLIA---TNNQISDITP--LGILTNLDELSLNG 226
Query: 334 NLL--FGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGSIPSE 391
N L G+ + +L L L+L +N++S P L LT L L L N +S P
Sbjct: 227 NQLKDIGT----LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-- 278
Query: 392 IXXXXXXXXXXXXXXXXXXXIPYSFGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVL 451
LT + L + N L P NL LT L L
Sbjct: 279 ------------------------LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTL 312
Query: 452 SYNQLQGPIPDLRNLTRLARVRLDRNHLTGNISESFGIHSNLSYINLSHKKF 503
+N + P + +LT+L R+ N ++ S +N+++++ H +
Sbjct: 313 YFNNISDISP-VSSLTKLQRLFFSNNKVSD--VSSLANLTNINWLSAGHNQI 361
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 131/264 (49%), Gaps = 26/264 (9%)
Query: 416 FGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQGPIPDLRNLTRLARVRLD 475
NLT ++ + + +N ++ P NL LT L L NQ+ P L+NLT L R+ L
Sbjct: 81 LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP-LKNLTNLNRLELS 137
Query: 476 RNHLTGNISESFGIHSNLSYINLSHKKFYGEISFDWGKFPNLGTL---DVSANNITGILP 532
N ++ +IS G+ S L F +++ D NL TL D+S+N ++ I
Sbjct: 138 SNTIS-DISALSGLTS------LQQLNFGNQVT-DLKPLANLTTLERLDISSNKVSDI-- 187
Query: 533 PEIGDSPQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHL 592
+ L+ L ++N I P LG L +L +L+LN NQ L SL L L
Sbjct: 188 SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDL 243
Query: 593 DLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIP 652
DL++N++SN P L L KL L L NQ S P L L++L+L+ N L E+I
Sbjct: 244 DLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDI- 297
Query: 653 SQVCSMQSLEKLNLAHNNLSGFIP 676
S + ++++L L L NN+S P
Sbjct: 298 SPISNLKNLTYLTLYFNNISDISP 321
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 136/296 (45%), Gaps = 41/296 (13%)
Query: 104 FSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYL 163
++ +L L L NQI I P + N + L L+LSSN+ S + L+ L+ L
Sbjct: 103 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLNF 158
Query: 164 STNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSE 223
NQ + P + +L+ L+ L + N +S L LTNL + NN +S P
Sbjct: 159 G-NQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP-- 211
Query: 224 IGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILNL 283
+G L +L L L N+L +L +L NL LDL +N +S PLS LT L L L
Sbjct: 212 LGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISNLAPLS--GLTKLTELKL 267
Query: 284 PHNSLSGSIP--------------------SEMGNLKSLYGLGLSFNKLSGSIPSSLGNL 323
N +S P S + NLK+L L L FN +S P S +L
Sbjct: 268 GANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVS--SL 325
Query: 324 TKLTILYLSDNLLFGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYL 379
TKL L+ S+N + S + NL + +L G N++S P L NLT + L L
Sbjct: 326 TKLQRLFFSNNKV--SDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGL 377
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 143/334 (42%), Gaps = 64/334 (19%)
Query: 155 LSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNN 214
L+ L + S NQ + P + +L+ L + + N ++ P L NLTNL + L+NN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 215 SLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLS-------------------LGNLPNLA 255
++ P + NL +L+ LEL N +S LS L NL L
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLNFGNQVTDLKPLANLTTLE 175
Query: 256 TLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGS 315
LD+ N +S L LTNL+ L +N +S P +G L +L L L+ N+L
Sbjct: 176 RLDISSNKVSDISVL--AKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD- 230
Query: 316 IPSSLGNLTKLTILYLSDNLLFGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLA 375
+L +LT LT L L++N + P + L L L+LG N++S P L LT L
Sbjct: 231 -IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALT 285
Query: 376 TLYLFTNLLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPYSFGNLTNMIVLSIYSNALSGA 435
L L N L P NL N+ L++Y N +S
Sbjct: 286 NLELNENQLEDISP--------------------------ISNLKNLTYLTLYFNNISDI 319
Query: 436 IPKEYGNLVKLTLLVLSYNQLQGPIPDLRNLTRL 469
P +L KL L S N++ + L NLT +
Sbjct: 320 SP--VSSLTKLQRLFFSNNKVSD-VSSLANLTNI 350
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 70.1 bits (170), Expect = 7e-12, Method: Composition-based stats.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 30/287 (10%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTE 861
N+ +G G G V A G+ AV K +L E ++E+K ++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 862 I-RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAE-------ELGWTQRMNV 913
+ +H NIV G C+H ++ EY G L L A+ L ++
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 914 IKGVADALSYLHN-DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELA 972
VA +++L + +C ++RD++++NVLL + A + DFG+++ + DS+ +
Sbjct: 166 SSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 221
Query: 973 G--TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLD 1029
+ ++APE + T +SDV+S+G+L E G +P I + S L +
Sbjct: 222 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI-LVNSKFYKLVKDGY 280
Query: 1030 EILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
++ P AP + SIM+ +C P RPT Q++ L+
Sbjct: 281 QMAQPAF-APK-----NIYSIMQ---ACWALEPTHRPTFQQICSFLQ 318
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 32/270 (11%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPL-----LSEMTCQQEFLNEVKSLTEIRHRNIV 868
IG G G VY L + KK H + ++++ +FL E + + H N++
Sbjct: 57 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 869 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
G C + S +V Y++ G L + N T + + VA + YL +
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 171
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS----SNWTELAGTIGYVAPELA 983
F V+RD++++N +LD ++ V+DFG+++ + N T + ++A E
Sbjct: 172 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 228
Query: 984 YTMKVTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPR-LPAPSC 1041
T K T KSDV+SFGVL E + +G P +++ T L +L P P P
Sbjct: 229 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEYCPDP-- 284
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
+ EV + C + RP+ ++
Sbjct: 285 --------LYEVMLKCWHPKAEMRPSFSEL 306
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand Complex
Length = 288
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 20/201 (9%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG G G VY+A+ + GE A+KK E + E+ L E++H NIVK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDE-GIPSTTIREISILKELKHSNIVKLYDV 68
Query: 874 CSHARHSFIVYEYLEMGSLAMI------LSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +V+E+L+ ++ L + T+ L + ++ G+A Y H+
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL-----LQLLNGIA----YCHDR 119
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPE-LAYTM 986
+++RD+ +N+L++ E E ++DFG++++ +T T+ Y AP+ L +
Sbjct: 120 ---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSK 176
Query: 987 KVTEKSDVYSFGVLALEAIKG 1007
K + D++S G + E + G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 69.7 bits (169), Expect = 8e-12, Method: Composition-based stats.
Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 859 LTEIRHRNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQR--MNVIK 915
L E+ H IVK Y F + + +++ ++L G L LS +E+ +T+ +
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLS-----KEVMFTEEDVKFYLA 133
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTI 975
+A AL +LH+ I+YRD+ +N+LLD E ++DFG+SK GT+
Sbjct: 134 ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 190
Query: 976 GYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
Y+APE+ T+ +D +SFGVL E + G P
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 32/270 (11%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPL-----LSEMTCQQEFLNEVKSLTEIRHRNIV 868
IG G G VY L + KK H + ++++ +FL E + + H N++
Sbjct: 30 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 869 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
G C + S +V Y++ G L + N T + + VA + YL +
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 144
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS----SNWTELAGTIGYVAPELA 983
F V+RD++++N +LD ++ V+DFG+++ + N T + ++A E
Sbjct: 145 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 201
Query: 984 YTMKVTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPR-LPAPSC 1041
T K T KSDV+SFGVL E + +G P +++ T L +L P P P
Sbjct: 202 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEYCPDP-- 257
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
+ EV + C + RP+ ++
Sbjct: 258 --------LYEVMLKCWHPKAEMRPSFSEL 279
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 131/264 (49%), Gaps = 26/264 (9%)
Query: 416 FGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQGPIPDLRNLTRLARVRLD 475
NLT ++ + + +N ++ P NL LT L L NQ+ P L+NLT L R+ L
Sbjct: 81 LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP-LKNLTNLNRLELS 137
Query: 476 RNHLTGNISESFGIHSNLSYINLSHKKFYGEISFDWGKFPNLGTL---DVSANNITGILP 532
N ++ +IS G+ S L F +++ D NL TL D+S+N ++ I
Sbjct: 138 SNTIS-DISALSGLTS------LQQLNFGNQVT-DLKPLANLTTLERLDISSNKVSDI-- 187
Query: 533 PEIGDSPQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHL 592
+ L+ L ++N I P LG L +L +L+LN NQ L SL L L
Sbjct: 188 SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDL 243
Query: 593 DLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIP 652
DL++N++SN P L L KL L L NQ S P L L++L+L+ N L E+I
Sbjct: 244 DLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDI- 297
Query: 653 SQVCSMQSLEKLNLAHNNLSGFIP 676
S + ++++L L L NN+S P
Sbjct: 298 SPISNLKNLTYLTLYFNNISDISP 321
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 135/296 (45%), Gaps = 41/296 (13%)
Query: 104 FSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYL 163
++ +L L L NQI I P + N + L L+LSSN+ S + L+ L+ L
Sbjct: 103 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLNF 158
Query: 164 STNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSE 223
NQ + P + +L+ L+ L + N +S L LTNL + NN +S P
Sbjct: 159 G-NQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP-- 211
Query: 224 IGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILNL 283
+G L +L L L N+L +L +L NL LDL +N +S PLS LT L L L
Sbjct: 212 LGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISNLAPLS--GLTKLTELKL 267
Query: 284 PHNSLSGSIP--------------------SEMGNLKSLYGLGLSFNKLSGSIPSSLGNL 323
N +S P S + NLK+L L L FN +S P S +L
Sbjct: 268 GANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVS--SL 325
Query: 324 TKLTILYLSDNLLFGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYL 379
TKL L+ +N + S + NL + +L G N++S P L NLT + L L
Sbjct: 326 TKLQRLFFYNNKV--SDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGL 377
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 150/367 (40%), Gaps = 86/367 (23%)
Query: 155 LSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNN 214
L+ L + S NQ + P + +L+ L + + N ++ P L NLTNL + L+NN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 215 SLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLS-------------------LGNLPNLA 255
++ P + NL +L+ LEL N +S LS L NL L
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLNFGNQVTDLKPLANLTTLE 175
Query: 256 TLDLHDNSLSGSIPLS--------------------FGNLTNLDILNLPHNSLS--GSIP 293
LD+ N +S L+ G LTNLD L+L N L G++
Sbjct: 176 RLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLA 235
Query: 294 SEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNLLFGSIPCEIGNLRYLFYL 353
S L +L L L+ N++S P L LTKLT L L N + P + L L L
Sbjct: 236 S----LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNL 287
Query: 354 ELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGSIPSEIXXXXXXXXXXXXXXXXXXXIP 413
EL +N+L P + NL NL L L+ N +S P
Sbjct: 288 ELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP------------------------ 321
Query: 414 YSFGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQGPIPDLRNLTRLARVR 473
+LT + L Y+N +S NL + L +NQ+ P L NLTR+ ++
Sbjct: 322 --VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP-LANLTRITQLG 376
Query: 474 LDRNHLT 480
L+ T
Sbjct: 377 LNDQAWT 383
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase In
Complex With An Mk-2461 Analog
Length = 307
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 32/270 (11%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPL-----LSEMTCQQEFLNEVKSLTEIRHRNIV 868
IG G G VY L + KK H + ++++ +FL E + + H N++
Sbjct: 37 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 869 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
G C + S +V Y++ G L + N T + + VA + YL +
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 151
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSS----NWTELAGTIGYVAPELA 983
F V+RD++++N +LD ++ V+DFG+++ + N T + ++A E
Sbjct: 152 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL 208
Query: 984 YTMKVTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPR-LPAPSC 1041
T K T KSDV+SFGVL E + +G P +++ T L +L P P P
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEYCPDP-- 264
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
+ EV + C + RP+ ++
Sbjct: 265 --------LYEVMLKCWHPKAEMRPSFSEL 286
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 9e-12, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D+D +G G G V A + E VAVK + + C + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLNHE 64
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
N+VKFYG H R I Y +LE S + + + + YLH
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN--WTELAGTIGYVAPELA 983
I +RDI +N+LLD +SDFG++ + ++ ++ GT+ YVAPEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 984 YTMKV-TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSN 1023
+ E DV+S G++ + G+ P D S C S+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 131/262 (50%), Gaps = 26/262 (9%)
Query: 418 NLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQGPIPDLRNLTRLARVRLDRN 477
NLT ++ + + +N ++ P NL LT L L NQ+ P L+NLT L R+ L N
Sbjct: 87 NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP-LKNLTNLNRLELSSN 143
Query: 478 HLTGNISESFGIHSNLSYINLSHKKFYGEISFDWGKFPNLGTL---DVSANNITGILPPE 534
++ +IS G+ S L F +++ D NL TL D+S+N ++ I
Sbjct: 144 TIS-DISALSGLTS------LQQLSFGNQVT-DLKPLANLTTLERLDISSNKVSDI--SV 193
Query: 535 IGDSPQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDL 594
+ L+ L ++N I P LG L +L +L+LN NQ L SL L LDL
Sbjct: 194 LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDL 249
Query: 595 SSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIPSQ 654
++N++SN P L L KL L L NQ S P L L++L+L+ N L E+I S
Sbjct: 250 ANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDI-SP 303
Query: 655 VCSMQSLEKLNLAHNNLSGFIP 676
+ ++++L L L NN+S P
Sbjct: 304 ISNLKNLTYLTLYFNNISDISP 325
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 138/297 (46%), Gaps = 43/297 (14%)
Query: 104 FSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYL 163
++ +L L L NQI I P + N + L L+LSSN+ S + L+ L+ L
Sbjct: 107 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSF 162
Query: 164 STNQFSGRIPPQIGHLSYLKALHLFENGLSG-SIPPSLGNLTNLAIMYLYNNSLSGSIPS 222
NQ + P + +L+ L+ L + N +S S+ L LTNL + NN +S P
Sbjct: 163 G-NQVTDLKP--LANLTTLERLDISSNKVSDISV---LAKLTNLESLIATNNQISDITP- 215
Query: 223 EIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILN 282
+G L +L L L N+L +L +L NL LDL +N +S PLS LT L L
Sbjct: 216 -LGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISNLAPLS--GLTKLTELK 270
Query: 283 LPHNSLSGSIP--------------------SEMGNLKSLYGLGLSFNKLSGSIPSSLGN 322
L N +S P S + NLK+L L L FN +S P S +
Sbjct: 271 LGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVS--S 328
Query: 323 LTKLTILYLSDNLLFGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYL 379
LTKL L+ ++N + S + NL + +L G N++S P L NLT + L L
Sbjct: 329 LTKLQRLFFANNKV--SDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGL 381
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 149/365 (40%), Gaps = 82/365 (22%)
Query: 155 LSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNN 214
L+ L + S NQ + P + +L+ L + + N ++ P L NLTNL + L+NN
Sbjct: 66 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 121
Query: 215 SLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLS-------------------LGNLPNLA 255
++ P + NL +L+ LEL N +S LS L NL L
Sbjct: 122 QITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLE 179
Query: 256 TLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGS 315
LD+ N +S L+ LTNL+ L +N +S P +G L +L L L+ N+L
Sbjct: 180 RLDISSNKVSDISVLA--KLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD- 234
Query: 316 IPSSLGNLTKLTILYLSDNLLFGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLA 375
+L +LT LT L L++N + P + L L L+LG N++S P L LT L
Sbjct: 235 -IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALT 289
Query: 376 TLYLFTNLLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPYSFGNLTNMIVLSIYSNALSGA 435
L L N L P NL N+ L++Y N +S
Sbjct: 290 NLELNENQLEDISP--------------------------ISNLKNLTYLTLYFNNISDI 323
Query: 436 IP--------------------KEYGNLVKLTLLVLSYNQLQGPIPDLRNLTRLARVRLD 475
P NL + L +NQ+ P L NLTR+ ++ L+
Sbjct: 324 SPVSSLTKLQRLFFANNKVSDVSSLANLTNINWLSAGHNQISDLTP-LANLTRITQLGLN 382
Query: 476 RNHLT 480
T
Sbjct: 383 DQAWT 387
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 69.7 bits (169), Expect = 9e-12, Method: Composition-based stats.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 30/287 (10%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTE 861
N+ +G G G V A G+ AV K +L E ++E+K ++
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 862 I-RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAE-------ELGWTQRMNV 913
+ +H NIV G C+H ++ EY G L L A+ L ++
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 914 IKGVADALSYLHN-DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELA 972
VA +++L + +C ++RD++++NVLL + A + DFG+++ + DS+ +
Sbjct: 158 SSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 213
Query: 973 G--TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLD 1029
+ ++APE + T +SDV+S+G+L E G +P I + S L +
Sbjct: 214 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI-LVNSKFYKLVKDGY 272
Query: 1030 EILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
++ P AP + SIM+ +C P RPT Q++ L+
Sbjct: 273 QMAQPAF-APK-----NIYSIMQ---ACWALEPTHRPTFQQICSFLQ 310
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 131/262 (50%), Gaps = 26/262 (9%)
Query: 418 NLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQGPIPDLRNLTRLARVRLDRN 477
NLT ++ + + +N ++ P NL LT L L NQ+ P L+NLT L R+ L N
Sbjct: 88 NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP-LKNLTNLNRLELSSN 144
Query: 478 HLTGNISESFGIHSNLSYINLSHKKFYGEISFDWGKFPNLGTL---DVSANNITGILPPE 534
++ +IS G+ S L F +++ D NL TL D+S+N ++ I
Sbjct: 145 TIS-DISALSGLTS------LQQLSFGNQVT-DLKPLANLTTLERLDISSNKVSDI--SV 194
Query: 535 IGDSPQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDL 594
+ L+ L ++N I P LG L +L +L+LN NQ L SL L LDL
Sbjct: 195 LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDL 250
Query: 595 SSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIPSQ 654
++N++SN P L L KL L L NQ S P L L++L+L+ N L E+I S
Sbjct: 251 ANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDI-SP 304
Query: 655 VCSMQSLEKLNLAHNNLSGFIP 676
+ ++++L L L NN+S P
Sbjct: 305 ISNLKNLTYLTLYFNNISDISP 326
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 137/297 (46%), Gaps = 43/297 (14%)
Query: 104 FSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYL 163
++ +L L L NQI I P + N + L L+LSSN+ S + L+ L+ L
Sbjct: 108 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSF 163
Query: 164 STNQFSGRIPPQIGHLSYLKALHLFENGLSG-SIPPSLGNLTNLAIMYLYNNSLSGSIPS 222
NQ + P + +L+ L+ L + N +S S+ L LTNL + NN +S P
Sbjct: 164 G-NQVTDLKP--LANLTTLERLDISSNKVSDISV---LAKLTNLESLIATNNQISDITP- 216
Query: 223 EIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILN 282
+G L +L L L N+L +L +L NL LDL +N +S PLS LT L L
Sbjct: 217 -LGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISNLAPLS--GLTKLTELK 271
Query: 283 LPHNSLSGSIP--------------------SEMGNLKSLYGLGLSFNKLSGSIPSSLGN 322
L N +S P S + NLK+L L L FN +S P S +
Sbjct: 272 LGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVS--S 329
Query: 323 LTKLTILYLSDNLLFGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYL 379
LTKL L+ +N + S + NL + +L G N++S P L NLT + L L
Sbjct: 330 LTKLQRLFFYNNKV--SDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGL 382
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 150/367 (40%), Gaps = 86/367 (23%)
Query: 155 LSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNN 214
L+ L + S NQ + P + +L+ L + + N ++ P L NLTNL + L+NN
Sbjct: 67 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 122
Query: 215 SLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLS-------------------LGNLPNLA 255
++ P + NL +L+ LEL N +S LS L NL L
Sbjct: 123 QITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLE 180
Query: 256 TLDLHDNSLSGSIPLS--------------------FGNLTNLDILNLPHNSLS--GSIP 293
LD+ N +S L+ G LTNLD L+L N L G++
Sbjct: 181 RLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLA 240
Query: 294 SEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNLLFGSIPCEIGNLRYLFYL 353
S L +L L L+ N++S P L LTKLT L L N + P + L L L
Sbjct: 241 S----LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNL 292
Query: 354 ELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGSIPSEIXXXXXXXXXXXXXXXXXXXIP 413
EL +N+L P + NL NL L L+ N +S P
Sbjct: 293 ELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP------------------------ 326
Query: 414 YSFGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQGPIPDLRNLTRLARVR 473
+LT + L Y+N +S NL + L +NQ+ P L NLTR+ ++
Sbjct: 327 --VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP-LANLTRITQLG 381
Query: 474 LDRNHLT 480
L+ T
Sbjct: 382 LNDQAWT 388
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With Flavonoid
Glycoside Quercitrin
Length = 305
Score = 69.7 bits (169), Expect = 9e-12, Method: Composition-based stats.
Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 859 LTEIRHRNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQR--MNVIK 915
L E+ H IVK Y F + + +++ ++L G L LS +E+ +T+ +
Sbjct: 81 LVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLS-----KEVMFTEEDVKFYLA 134
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTI 975
+A AL +LH+ I+YRD+ +N+LLD E ++DFG+SK GT+
Sbjct: 135 ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 191
Query: 976 GYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
Y+APE+ T+ +D +SFGVL E + G P
Sbjct: 192 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 69.7 bits (169), Expect = 9e-12, Method: Composition-based stats.
Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 859 LTEIRHRNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQR--MNVIK 915
L E+ H IVK Y F + + +++ ++L G L LS +E+ +T+ +
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLS-----KEVMFTEEDVKFYLA 133
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTI 975
+A AL +LH+ I+YRD+ +N+LLD E ++DFG+SK GT+
Sbjct: 134 ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 190
Query: 976 GYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
Y+APE+ T+ +D +SFGVL E + G P
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of
C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain Of
C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With 4-(
3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With 4-(
(6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 32/270 (11%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPL-----LSEMTCQQEFLNEVKSLTEIRHRNIV 868
IG G G VY L + KK H + ++++ +FL E + + H N++
Sbjct: 35 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 869 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
G C + S +V Y++ G L + N T + + VA + YL +
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 149
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS----SNWTELAGTIGYVAPELA 983
F V+RD++++N +LD ++ V+DFG+++ + N T + ++A E
Sbjct: 150 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 206
Query: 984 YTMKVTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPR-LPAPSC 1041
T K T KSDV+SFGVL E + +G P +++ T L +L P P P
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEYCPDP-- 262
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
+ EV + C + RP+ ++
Sbjct: 263 --------LYEVMLKCWHPKAEMRPSFSEL 284
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 69.7 bits (169), Expect = 9e-12, Method: Composition-based stats.
Identities = 75/303 (24%), Positives = 138/303 (45%), Gaps = 39/303 (12%)
Query: 793 DRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAELS---SGEIVAVKKFHSPLLSEMTCQ 849
D + ++ ++ D E H G+ S+Y + + +GE+VAVK ++ +
Sbjct: 1 DPTVFHKRYLKKIRDLGEGHF----GKVSLYCYDPTNDGTGEMVAVKALKEGCGPQL--R 54
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNATSAEELGW 907
+ E++ L + H +IVK+ G C + +V EY+ +GSL L +G
Sbjct: 55 SGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC----VGL 110
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN 967
Q + + + + ++YLH + ++R ++++NVLLD + + DFG++K++ P+
Sbjct: 111 AQLLLFAQQICEGMAYLHAQHY---IHRALAARNVLLDNDRLVKIGDFGLAKAV-PEGHE 166
Query: 968 WTELA----GTIGYVAPELAYTMKVTEKSDVYSFGVLALEAI------KGKHPRDFISSI 1017
+ + + + APE K SDV+SFGV E + + H + F I
Sbjct: 167 YYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTK-FTELI 225
Query: 1018 CSTSSNLD-RTLDEILD--PRLPAPSCNIRDKL-ISIMEVAISCLDENPDSRPTMQKVSQ 1073
T + L E+L+ RLP P D+ I + +C + RPT Q +
Sbjct: 226 GHTQGQMTVLRLTELLERGERLPRP-----DRCPCEIYHLMKNCWETEASFRPTFQNLVP 280
Query: 1074 LLK 1076
+L+
Sbjct: 281 ILQ 283
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 69.7 bits (169), Expect = 9e-12, Method: Composition-based stats.
Identities = 75/303 (24%), Positives = 138/303 (45%), Gaps = 39/303 (12%)
Query: 793 DRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAELS---SGEIVAVKKFHSPLLSEMTCQ 849
D + ++ ++ D E H G+ S+Y + + +GE+VAVK ++ +
Sbjct: 2 DPTVFHKRYLKKIRDLGEGHF----GKVSLYCYDPTNDGTGEMVAVKALKEGCGPQL--R 55
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNATSAEELGW 907
+ E++ L + H +IVK+ G C + +V EY+ +GSL L +G
Sbjct: 56 SGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC----VGL 111
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN 967
Q + + + + ++YLH + ++R ++++NVLLD + + DFG++K++ P+
Sbjct: 112 AQLLLFAQQICEGMAYLHAQHY---IHRALAARNVLLDNDRLVKIGDFGLAKAV-PEGHE 167
Query: 968 WTELA----GTIGYVAPELAYTMKVTEKSDVYSFGVLALEAI------KGKHPRDFISSI 1017
+ + + + APE K SDV+SFGV E + + H + F I
Sbjct: 168 YYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTK-FTELI 226
Query: 1018 CSTSSNLD-RTLDEILD--PRLPAPSCNIRDKL-ISIMEVAISCLDENPDSRPTMQKVSQ 1073
T + L E+L+ RLP P D+ I + +C + RPT Q +
Sbjct: 227 GHTQGQMTVLRLTELLERGERLPRP-----DRCPCEIYHLMKNCWETEASFRPTFQNLVP 281
Query: 1074 LLK 1076
+L+
Sbjct: 282 ILQ 284
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound
1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a And
Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 14/208 (6%)
Query: 806 NDFDEEHCIGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+DF++ +G G G V++ + SG ++A K H L + + + + E++ L E
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 90
Query: 865 RNIVKFYG-FCSHARHSFIVYEYLEMGSLAMILSNATS-AEELGWTQRMNVIKGVADALS 922
IV FYG F S S I E+++ GSL +L A E++ + VIKG L+
Sbjct: 91 PYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LT 145
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
YL I++RD+ N+L++ E + DFG+S L +N GT Y++PE
Sbjct: 146 YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPER 201
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ +SD++S G+ +E G++P
Sbjct: 202 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 69.7 bits (169), Expect = 9e-12, Method: Composition-based stats.
Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 15/204 (7%)
Query: 814 IGTGGQGSVYRA--ELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
+G G GSV + + +I VA+K +E +E + E + + ++ + IV+
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLDNPYIVRL 75
Query: 871 YGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
G C A +V E G L L EE+ + ++ V+ + YL F
Sbjct: 76 IGVC-QAEALMLVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYLEEKNF- 131
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG---TIGYVAPELAYTMK 987
V+RD++++NVLL + A +SDFG+SK+L D S +T + + + APE K
Sbjct: 132 --VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 189
Query: 988 VTEKSDVYSFGVLALEAIK-GKHP 1010
+ +SDV+S+GV EA+ G+ P
Sbjct: 190 FSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 9e-12, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D+D +G G G V A + E VAVK + + C + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLNHE 64
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
N+VKFYG H R I Y +LE S + + + + YLH
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN--WTELAGTIGYVAPELA 983
I +RDI +N+LLD +SDFG++ + ++ ++ GT+ YVAPEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 984 YTMKV-TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSN 1023
+ E DV+S G++ + G+ P D S C S+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.7 bits (169), Expect = 9e-12, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D+D +G G G V A + E VAVK + + C + E+ + H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLNHE 65
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
N+VKFYG H R I Y +LE S + + + + YLH
Sbjct: 66 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN--WTELAGTIGYVAPELA 983
I +RDI +N+LLD +SDFG++ + ++ ++ GT+ YVAPEL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 179
Query: 984 YTMKV-TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSN 1023
+ E DV+S G++ + G+ P D S C S+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 32/270 (11%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPL-----LSEMTCQQEFLNEVKSLTEIRHRNIV 868
IG G G VY L + KK H + ++++ +FL E + + H N++
Sbjct: 33 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 869 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
G C + S +V Y++ G L + N T + + VA + YL +
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 147
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS----SNWTELAGTIGYVAPELA 983
F V+RD++++N +LD ++ V+DFG+++ + N T + ++A E
Sbjct: 148 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204
Query: 984 YTMKVTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPR-LPAPSC 1041
T K T KSDV+SFGVL E + +G P +++ T L +L P P P
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEYCPDP-- 260
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
+ EV + C + RP+ ++
Sbjct: 261 --------LYEVMLKCWHPKAEMRPSFSEL 282
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 32/270 (11%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPL-----LSEMTCQQEFLNEVKSLTEIRHRNIV 868
IG G G VY L + KK H + ++++ +FL E + + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 869 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
G C + S +V Y++ G L + N T + + VA + YL +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 152
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS----SNWTELAGTIGYVAPELA 983
F V+RD++++N +LD ++ V+DFG+++ + N T + ++A E
Sbjct: 153 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 984 YTMKVTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPR-LPAPSC 1041
T K T KSDV+SFGVL E + +G P +++ T L +L P P P
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEYCPDP-- 265
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
+ EV + C + RP+ ++
Sbjct: 266 --------LYEVMLKCWHPKAEMRPSFSEL 287
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 122/300 (40%), Gaps = 60/300 (20%)
Query: 802 VRATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLT 860
+R +DF+E +G G G V +A + A+KK T L+EV L
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI----LSEVMLLA 57
Query: 861 EIRHRNIVKFYGFCSHARHS-------------FIVYEYLEMGSLAMIL--SNATSAEEL 905
+ H+ +V++Y R+ FI EY E G+L ++ N +
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE 117
Query: 906 GWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKS----- 960
W + + + +ALSY+H+ I++RD+ N+ +D + DFG++K+
Sbjct: 118 YW----RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 961 --LKPDSS-------NWTELAGTIGYVAPE-LAYTMKVTEKSDVYSFGVLALEAI----K 1006
LK DS N T GT YVA E L T EK D+YS G++ E I
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFST 230
Query: 1007 GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRP 1066
G + + + S S P + K+I ++ +D +P+ RP
Sbjct: 231 GMERVNILKKLRSVSIE--------FPPDFDDNKMKVEKKIIRLL------IDHDPNKRP 276
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1
Length = 302
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 32/270 (11%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPL-----LSEMTCQQEFLNEVKSLTEIRHRNIV 868
IG G G VY L + KK H + ++++ +FL E + + H N++
Sbjct: 36 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 869 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
G C + S +V Y++ G L + N T + + VA + YL +
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 150
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS----SNWTELAGTIGYVAPELA 983
F V+RD++++N +LD ++ V+DFG+++ + N T + ++A E
Sbjct: 151 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 207
Query: 984 YTMKVTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPR-LPAPSC 1041
T K T KSDV+SFGVL E + +G P +++ T L +L P P P
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEYCPDP-- 263
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
+ EV + C + RP+ ++
Sbjct: 264 --------LYEVMLKCWHPKAEMRPSFSEL 285
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor
13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 32/270 (11%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPL-----LSEMTCQQEFLNEVKSLTEIRHRNIV 868
IG G G VY L + KK H + ++++ +FL E + + H N++
Sbjct: 37 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 869 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
G C + S +V Y++ G L + N T + + VA + YL +
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 151
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS----SNWTELAGTIGYVAPELA 983
F V+RD++++N +LD ++ V+DFG+++ + N T + ++A E
Sbjct: 152 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 208
Query: 984 YTMKVTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPR-LPAPSC 1041
T K T KSDV+SFGVL E + +G P +++ T L +L P P P
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEYCPDP-- 264
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
+ EV + C + RP+ ++
Sbjct: 265 --------LYEVMLKCWHPKAEMRPSFSEL 286
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 32/270 (11%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPL-----LSEMTCQQEFLNEVKSLTEIRHRNIV 868
IG G G VY L + KK H + ++++ +FL E + + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 869 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
G C + S +V Y++ G L + N T + + VA + YL +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 152
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS----SNWTELAGTIGYVAPELA 983
F V+RD++++N +LD ++ V+DFG+++ + N T + ++A E
Sbjct: 153 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 984 YTMKVTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPR-LPAPSC 1041
T K T KSDV+SFGVL E + +G P +++ T L +L P P P
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEYCPDP-- 265
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
+ EV + C + RP+ ++
Sbjct: 266 --------LYEVMLKCWHPKAEMRPSFSEL 287
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 16/207 (7%)
Query: 814 IGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFY- 871
+GTGG G V R +GE VA+K+ L + ++ + E++ + ++ H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKN--RERWCLEIQIMKKLNHPNVVSARE 79
Query: 872 ---GFCSHARHSF--IVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
G A + + EY E G L L+ + L ++ ++ AL YLH
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139
Query: 927 DCFPPIVYRDISSKNVLLDLEYEA---HVSDFGISKSLKPDSSNWTELAGTIGYVAPELA 983
+ I++RD+ +N++L + + D G +K L TE GT+ Y+APEL
Sbjct: 140 N---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQYLAPELL 195
Query: 984 YTMKVTEKSDVYSFGVLALEAIKGKHP 1010
K T D +SFG LA E I G P
Sbjct: 196 EQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122)
Length = 677
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 16/207 (7%)
Query: 814 IGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFY- 871
+GTGG G V R +GE VA+K+ L + ++ + E++ + ++ H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKN--RERWCLEIQIMKKLNHPNVVSARE 80
Query: 872 ---GFCSHARHSF--IVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
G A + + EY E G L L+ + L ++ ++ AL YLH
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 140
Query: 927 DCFPPIVYRDISSKNVLLDLEYEA---HVSDFGISKSLKPDSSNWTELAGTIGYVAPELA 983
+ I++RD+ +N++L + + D G +K L TE GT+ Y+APEL
Sbjct: 141 N---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQYLAPELL 196
Query: 984 YTMKVTEKSDVYSFGVLALEAIKGKHP 1010
K T D +SFG LA E I G P
Sbjct: 197 EQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine
Derivatives As Potent, Selective Tie-2 Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of Triazine
Derivatives As Potent, Selective Tie-2 Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent 2-(Pyridin-2-Yl)-
1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent 2-(Pyridin-2-Yl)-
1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 130/292 (44%), Gaps = 51/292 (17%)
Query: 806 NDFDEEHCIGTGGQGSVYRAELSSGEI---VAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
ND + IG G G V +A + + A+K+ + ++F E++ L ++
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE--YASKDDHRDFAGELEVLCKL 72
Query: 863 -RHRNIVKFYGFCSHARHSFIVYEYLEMGSL--------------AMILSNATSAEELGW 907
H NI+ G C H + ++ EY G+L A ++N+T A L
Sbjct: 73 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST-ASTLSS 131
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN 967
Q ++ VA + YL F ++RD++++N+L+ Y A ++DFG+S+ +
Sbjct: 132 QQLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSRGQE----- 183
Query: 968 WTELAGTIG-----YVAPE-LAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICS- 1019
+ T+G ++A E L Y++ T SDV+S+GVL E + G P C
Sbjct: 184 -VYVKKTMGRLPVRWMAIESLNYSVYTT-NSDVWSYGVLLWEIVSLGGTP------YCGM 235
Query: 1020 TSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
T + L L + RL P N D++ +M C E P RP+ ++
Sbjct: 236 TCAELYEKLPQ--GYRLEKP-LNCDDEVYDLMR---QCWREKPYERPSFAQI 281
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 130/292 (44%), Gaps = 51/292 (17%)
Query: 806 NDFDEEHCIGTGGQGSVYRAELSSGEI---VAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
ND + IG G G V +A + + A+K+ + ++F E++ L ++
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE--YASKDDHRDFAGELEVLCKL 82
Query: 863 -RHRNIVKFYGFCSHARHSFIVYEYLEMGSL--------------AMILSNATSAEELGW 907
H NI+ G C H + ++ EY G+L A ++N+T A L
Sbjct: 83 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST-ASTLSS 141
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN 967
Q ++ VA + YL F ++RD++++N+L+ Y A ++DFG+S+ +
Sbjct: 142 QQLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSRGQE----- 193
Query: 968 WTELAGTIG-----YVAPE-LAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICS- 1019
+ T+G ++A E L Y++ T SDV+S+GVL E + G P C
Sbjct: 194 -VYVKKTMGRLPVRWMAIESLNYSVYTT-NSDVWSYGVLLWEIVSLGGTP------YCGM 245
Query: 1020 TSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
T + L L + RL P N D++ +M C E P RP+ ++
Sbjct: 246 TCAELYEKLPQ--GYRLEKP-LNCDDEVYDLMR---QCWREKPYERPSFAQI 291
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D+D +G G G V A + E VAVK + + C + E+ + H
Sbjct: 7 DWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
N+VKFYG H R I Y +LE S + + + + YLH
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN--WTELAGTIGYVAPELA 983
I +RDI +N+LLD +SDFG++ + ++ ++ GT+ YVAPEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 984 YTMKV-TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSN 1023
+ E DV+S G++ + G+ P D S C S+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D+D +G G G V A + E VAVK + + C + E+ + H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINAMLNHE 65
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
N+VKFYG H R I Y +LE S + + + + YLH
Sbjct: 66 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN--WTELAGTIGYVAPELA 983
I +RDI +N+LLD +SDFG++ + ++ ++ GT+ YVAPEL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 984 YTMKV-TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSN 1023
+ E DV+S G++ + G+ P D S C S+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 68.9 bits (167), Expect = 2e-11, Method: Composition-based stats.
Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 16/219 (7%)
Query: 798 YEEIVRATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLL-SEMTCQQEFLNE 855
Y+E+++ ++ IGTGG V A + +GE+VA+K L S++ E
Sbjct: 5 YDELLKY---YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLP---RIKTE 58
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+++L +RH++I + Y A F+V EY G L S + L + V +
Sbjct: 59 IEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGEL---FDYIISQDRLSEEETRVVFR 115
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSS-NWTELAGT 974
+ A++Y+H+ + +RD+ +N+L D ++ + DFG+ K + + G+
Sbjct: 116 QIVSAVAYVHSQGY---AHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGS 172
Query: 975 IGYVAPELAYTMK-VTEKSDVYSFGVLALEAIKGKHPRD 1012
+ Y APEL + ++DV+S G+L + G P D
Sbjct: 173 LAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 62/238 (26%), Positives = 103/238 (43%), Gaps = 21/238 (8%)
Query: 808 FDEEHCIGTGGQGSVYRAE----LSSGEIVAVKKFHSPLLSEMTCQQEFLN-EVKSLTEI 862
F+ +G GG G V++ ++G+I A+K ++ E L E+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 863 RHRNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+H IV Y F + + +++ EYL G L M L E + ++ AL
Sbjct: 79 KHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGIFME---DTACFYLAEISMAL 134
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPE 981
+LH I+YRD+ +N++L+ + ++DFG+ K D + GTI Y+APE
Sbjct: 135 GHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPE 191
Query: 982 LAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAP 1039
+ D +S G L + + G P T N +T+D+IL +L P
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPP--------FTGENRKKTIDKILKCKLNLP 241
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 62/238 (26%), Positives = 103/238 (43%), Gaps = 21/238 (8%)
Query: 808 FDEEHCIGTGGQGSVYRAE----LSSGEIVAVKKFHSPLLSEMTCQQEFLN-EVKSLTEI 862
F+ +G GG G V++ ++G+I A+K ++ E L E+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 863 RHRNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+H IV Y F + + +++ EYL G L M L E + ++ AL
Sbjct: 79 KHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGIFME---DTACFYLAEISMAL 134
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPE 981
+LH I+YRD+ +N++L+ + ++DFG+ K D + GTI Y+APE
Sbjct: 135 GHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPE 191
Query: 982 LAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAP 1039
+ D +S G L + + G P T N +T+D+IL +L P
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPP--------FTGENRKKTIDKILKCKLNLP 241
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D+D +G G G V A + E VAVK + + C + E+ + H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 65
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
N+VKFYG H R I Y +LE S + + + + YLH
Sbjct: 66 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN--WTELAGTIGYVAPELA 983
I +RDI +N+LLD +SDFG++ + ++ ++ GT+ YVAPEL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 984 YTMKV-TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSN 1023
+ E DV+S G++ + G+ P D S C S+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D+D +G G G V A + E VAVK + + C + E+ + H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 65
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
N+VKFYG H R I Y +LE S + + + + YLH
Sbjct: 66 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN--WTELAGTIGYVAPELA 983
I +RDI +N+LLD +SDFG++ + ++ ++ GT+ YVAPEL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 984 YTMKV-TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSN 1023
+ E DV+S G++ + G+ P D S C S+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D+D +G G G V A + E VAVK + + C + E+ + H
Sbjct: 6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 63
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
N+VKFYG H R I Y +LE S + + + + YLH
Sbjct: 64 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN--WTELAGTIGYVAPELA 983
I +RDI +N+LLD +SDFG++ + ++ ++ GT+ YVAPEL
Sbjct: 121 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 177
Query: 984 YTMKV-TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSN 1023
+ E DV+S G++ + G+ P D S C S+
Sbjct: 178 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 218
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D+D +G G G V A + E VAVK + + C + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
N+VKFYG H R I Y +LE S + + + + YLH
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN--WTELAGTIGYVAPELA 983
I +RDI +N+LLD +SDFG++ + ++ ++ GT+ YVAPEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 984 YTMKV-TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSN 1023
+ E DV+S G++ + G+ P D S C S+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1
Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human Chk1
Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D+D +G G G V A + E VAVK + + C + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
N+VKFYG H R I Y +LE S + + + + YLH
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN--WTELAGTIGYVAPELA 983
I +RDI +N+LLD +SDFG++ + ++ ++ GT+ YVAPEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 984 YTMKV-TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSN 1023
+ E DV+S G++ + G+ P D S C S+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint Kinase
1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint Kinase
1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D+D +G G G V A + E VAVK + + C + E+ + H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 65
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
N+VKFYG H R I Y +LE S + + + + YLH
Sbjct: 66 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN--WTELAGTIGYVAPELA 983
I +RDI +N+LLD +SDFG++ + ++ ++ GT+ YVAPEL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 984 YTMKV-TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSN 1023
+ E DV+S G++ + G+ P D S C S+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D+D +G G G V A + E VAVK + + C + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
N+VKFYG H R I Y +LE S + + + + YLH
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN--WTELAGTIGYVAPELA 983
I +RDI +N+LLD +SDFG++ + ++ ++ GT+ YVAPEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 984 YTMKV-TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSN 1023
+ E DV+S G++ + G+ P D S C S+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D+D +G G G V A + E VAVK + + C + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
N+VKFYG H R I Y +LE S + + + + YLH
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN--WTELAGTIGYVAPELA 983
I +RDI +N+LLD +SDFG++ + ++ ++ GT+ YVAPEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 984 YTMKV-TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSN 1023
+ E DV+S G++ + G+ P D S C S+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D+D +G G G V A + E VAVK + + C + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
N+VKFYG H R I Y +LE S + + + + YLH
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN--WTELAGTIGYVAPELA 983
I +RDI +N+LLD +SDFG++ + ++ ++ GT+ YVAPEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 984 YTMKV-TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSN 1023
+ E DV+S G++ + G+ P D S C S+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D+D +G G G V A + E VAVK + + C + E+ + H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 65
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
N+VKFYG H R I Y +LE S + + + + YLH
Sbjct: 66 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN--WTELAGTIGYVAPELA 983
I +RDI +N+LLD +SDFG++ + ++ ++ GT+ YVAPEL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 984 YTMKV-TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSN 1023
+ E DV+S G++ + G+ P D S C S+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D+D +G G G V A + E VAVK + + C + E+ + H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 65
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
N+VKFYG H R I Y +LE S + + + + YLH
Sbjct: 66 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN--WTELAGTIGYVAPELA 983
I +RDI +N+LLD +SDFG++ + ++ ++ GT+ YVAPEL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 984 YTMKV-TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSN 1023
+ E DV+S G++ + G+ P D S C S+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G GG V+ A +L VAVK + L + + F E ++ + H IV Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 873 FCSHARHS----FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDC 928
+ +IV EY++ +L I+ + + + + VI AL++ H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQALNFSHQN- 135
Query: 929 FPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIG---YVAPELAYT 985
I++RD+ N+++ V DFGI++++ ++ T+ A IG Y++PE A
Sbjct: 136 --GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 986 MKVTEKSDVYSFGVLALEAIKGKHP 1010
V +SDVYS G + E + G+ P
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP
DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G GG V+ A +L VAVK + L + + F E ++ + H IV Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 873 FCSHARHS----FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDC 928
+ +IV EY++ +L I+ + + + + VI AL++ H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQALNFSHQN- 135
Query: 929 FPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIG---YVAPELAYT 985
I++RD+ N+++ V DFGI++++ ++ T+ A IG Y++PE A
Sbjct: 136 --GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 986 MKVTEKSDVYSFGVLALEAIKGKHP 1010
V +SDVYS G + E + G+ P
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 118/270 (43%), Gaps = 32/270 (11%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPL-----LSEMTCQQEFLNEVKSLTEIRHRNIV 868
IG G G VY L + KK H + ++++ +FL E + + H N++
Sbjct: 43 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 869 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
G C + S +V Y++ G L + N T + + VA + +L +
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK 157
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS----SNWTELAGTIGYVAPELA 983
F V+RD++++N +LD ++ V+DFG+++ + N T + ++A E
Sbjct: 158 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214
Query: 984 YTMKVTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPR-LPAPSC 1041
T K T KSDV+SFGVL E + +G P +++ T L +L P P P
Sbjct: 215 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEYCPDP-- 270
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
+ EV + C + RP+ ++
Sbjct: 271 --------LYEVMLKCWHPKAEMRPSFSEL 292
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D+D +G G G V A + E VAVK + + C + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
N+VKFYG H R I Y +LE S + + + + YLH
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN--WTELAGTIGYVAPELA 983
I +RDI +N+LLD +SDFG++ + ++ ++ GT+ YVAPEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 984 YTMKV-TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSN 1023
+ E DV+S G++ + G+ P D S C S+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D+D +G G G V A + E VAVK + + C + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
N+VKFYG H R I Y +LE S + + + + YLH
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN--WTELAGTIGYVAPELA 983
I +RDI +N+LLD +SDFG++ + ++ ++ GT+ YVAPEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 984 YTMKV-TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSN 1023
+ E DV+S G++ + G+ P D S C S+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 121/270 (44%), Gaps = 32/270 (11%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPL-----LSEMTCQQEFLNEVKSLTEIRHRNIV 868
IG G G VY L + KK H + ++++ +FL E + + H N++
Sbjct: 39 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 869 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
G C + S +V Y++ G L + N T + + VA + +L +
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK 153
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL---KPDS-SNWTELAGTIGYVAPELA 983
F V+RD++++N +LD ++ V+DFG+++ + + DS N T + ++A E
Sbjct: 154 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 984 YTMKVTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPR-LPAPSC 1041
T K T KSDV+SFGVL E + +G P +++ T L +L P P P
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEYCPDP-- 266
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
+ EV + C + RP+ ++
Sbjct: 267 --------LYEVMLKCWHPKAEMRPSFSEL 288
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D+D +G G G V A + E VAVK + + C + E+ + H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 65
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
N+VKFYG H R I Y +LE S + + + + YLH
Sbjct: 66 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN--WTELAGTIGYVAPELA 983
I +RDI +N+LLD +SDFG++ + ++ ++ GT+ YVAPEL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 984 YTMKV-TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSN 1023
+ E DV+S G++ + G+ P D S C S+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D+D +G G G V A + E VAVK + + C + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
N+VKFYG H R I Y +LE S + + + + YLH
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN--WTELAGTIGYVAPELA 983
I +RDI +N+LLD +SDFG++ + ++ ++ GT+ YVAPEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 984 YTMKV-TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSN 1023
+ E DV+S G++ + G+ P D S C S+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 219
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Pyrrolotriazine Based Inhibitor
Length = 373
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 118/270 (43%), Gaps = 32/270 (11%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPL-----LSEMTCQQEFLNEVKSLTEIRHRNIV 868
IG G G VY L + KK H + ++++ +FL E + + H N++
Sbjct: 97 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 869 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
G C + S +V Y++ G L + N T + + VA + +L +
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK 211
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS----SNWTELAGTIGYVAPELA 983
F V+RD++++N +LD ++ V+DFG+++ + N T + ++A E
Sbjct: 212 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268
Query: 984 YTMKVTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPR-LPAPSC 1041
T K T KSDV+SFGVL E + +G P +++ T L +L P P P
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEYCPDP-- 324
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
+ EV + C + RP+ ++
Sbjct: 325 --------LYEVMLKCWHPKAEMRPSFSEL 346
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 118/270 (43%), Gaps = 32/270 (11%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPL-----LSEMTCQQEFLNEVKSLTEIRHRNIV 868
IG G G VY L + KK H + ++++ +FL E + + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 869 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
G C + S +V Y++ G L + N T + + VA + +L +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK 152
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS----SNWTELAGTIGYVAPELA 983
F V+RD++++N +LD ++ V+DFG+++ + N T + ++A E
Sbjct: 153 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 984 YTMKVTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPR-LPAPSC 1041
T K T KSDV+SFGVL E + +G P +++ T L +L P P P
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEYCPDP-- 265
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
+ EV + C + RP+ ++
Sbjct: 266 --------LYEVMLKCWHPKAEMRPSFSEL 287
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 118/270 (43%), Gaps = 32/270 (11%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPL-----LSEMTCQQEFLNEVKSLTEIRHRNIV 868
IG G G VY L + KK H + ++++ +FL E + + H N++
Sbjct: 39 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 869 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
G C + S +V Y++ G L + N T + + VA + +L +
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK 153
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS----SNWTELAGTIGYVAPELA 983
F V+RD++++N +LD ++ V+DFG+++ + N T + ++A E
Sbjct: 154 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 984 YTMKVTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPR-LPAPSC 1041
T K T KSDV+SFGVL E + +G P +++ T L +L P P P
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEYCPDP-- 266
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
+ EV + C + RP+ ++
Sbjct: 267 --------LYEVMLKCWHPKAEMRPSFSEL 288
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 123/267 (46%), Gaps = 32/267 (11%)
Query: 811 EHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
E +G G G V+ A + VAVK +S + FL E + ++H +VK
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS----VEAFLAEANVMKTLQHDKLVKL 242
Query: 871 YGFCSHARHSFIVYEYLEMGSLAMIL-SNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
+ + +I+ E++ GSL L S+ S + L + ++ +A+ ++++ +
Sbjct: 243 HAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRNY 299
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVT 989
++RD+ + N+L+ ++DFG+++ WT APE T
Sbjct: 300 ---IHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWT---------APEAINFGSFT 347
Query: 990 EKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLI 1048
KSDV+SFG+L +E + G+ P +S + + R L+ R+P P N ++L
Sbjct: 348 IKSDVWSFGILLMEIVTYGRIPYPGMS-----NPEVIRALERGY--RMPRPE-NCPEELY 399
Query: 1049 SIMEVAISCLDENPDSRPTMQKVSQLL 1075
+IM + C P+ RPT + + +L
Sbjct: 400 NIM---MRCWKNRPEERPTFEYIQSVL 423
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepat
Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 118/270 (43%), Gaps = 32/270 (11%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPL-----LSEMTCQQEFLNEVKSLTEIRHRNIV 868
IG G G VY L + KK H + ++++ +FL E + + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 869 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
G C + S +V Y++ G L + N T + + VA + +L +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK 152
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS----SNWTELAGTIGYVAPELA 983
F V+RD++++N +LD ++ V+DFG+++ + N T + ++A E
Sbjct: 153 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 984 YTMKVTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPR-LPAPSC 1041
T K T KSDV+SFGVL E + +G P +++ T L +L P P P
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEYCPDP-- 265
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
+ EV + C + RP+ ++
Sbjct: 266 --------LYEVMLKCWHPKAEMRPSFSEL 287
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G GG V+ A +L VAVK + L + + F E ++ + H IV Y
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYA 79
Query: 873 FCSHARHS----FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDC 928
+ +IV EY++ +L I+ + + + + VI AL++ H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQALNFSHQN- 135
Query: 929 FPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIG---YVAPELAYT 985
I++RD+ N+++ V DFGI++++ ++ T+ A IG Y++PE A
Sbjct: 136 --GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 986 MKVTEKSDVYSFGVLALEAIKGKHP 1010
V +SDVYS G + E + G+ P
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide
Inhibitor
Length = 333
Score = 68.2 bits (165), Expect = 3e-11, Method: Composition-based stats.
Identities = 73/295 (24%), Positives = 132/295 (44%), Gaps = 42/295 (14%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTE 861
N+ +G G G V A G+ AV K +L E ++E+K ++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 862 I-RHRNIVKFYGFCSHARHSFIVYEYLEMGSL---------------AMILSNATSAEEL 905
+ +H NIV G C+H ++ EY G L A ++N+T++
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTR- 164
Query: 906 GWTQRMNVIKGVADALSYLHN-DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPD 964
++ VA +++L + +C ++RD++++NVLL + A + DFG+++ + D
Sbjct: 165 ---DLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMND 217
Query: 965 SSNWTELAG--TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTS 1021
S+ + + ++APE + T +SDV+S+G+L E G +P I + S
Sbjct: 218 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI-LVNSKF 276
Query: 1022 SNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
L + ++ P AP + SIM+ +C P RPT Q++ L+
Sbjct: 277 YKLVKDGYQMAQPAF-APK-----NIYSIMQ---ACWALEPTHRPTFQQICSFLQ 322
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+GT G+ V + EL+ G VAVK + + + + E+++L RH +I+K Y
Sbjct: 26 VGTFGKVKVGKHELT-GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQV 84
Query: 874 CSHARHSFIVYEYLEMGSL-AMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
S F+V EY+ G L I N E+ ++ GV Y H +
Sbjct: 85 ISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGV----DYCHRHM---V 137
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPE-LAYTMKVTEK 991
V+RD+ +NVLLD A ++DFG+S ++ D G+ Y APE ++ + +
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLS-NMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPE 196
Query: 992 SDVYSFGVLALEAIKGKHPRD 1012
D++S GV+ + G P D
Sbjct: 197 VDIWSSGVILYALLCGTLPFD 217
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 118/270 (43%), Gaps = 32/270 (11%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPL-----LSEMTCQQEFLNEVKSLTEIRHRNIV 868
IG G G VY L + KK H + ++++ +FL E + + H N++
Sbjct: 36 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 869 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
G C + S +V Y++ G L + N T + + VA + +L +
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK 150
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS----SNWTELAGTIGYVAPELA 983
F V+RD++++N +LD ++ V+DFG+++ + N T + ++A E
Sbjct: 151 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 207
Query: 984 YTMKVTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLDRTLDEILDPR-LPAPSC 1041
T K T KSDV+SFGVL E + +G P +++ T L +L P P P
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEYCPDP-- 263
Query: 1042 NIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
+ EV + C + RP+ ++
Sbjct: 264 --------LYEVMLKCWHPKAEMRPSFSEL 285
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 68.2 bits (165), Expect = 3e-11, Method: Composition-based stats.
Identities = 66/260 (25%), Positives = 116/260 (44%), Gaps = 22/260 (8%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G GG V+ A +L VAVK + L + + F E ++ + H IV Y
Sbjct: 37 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 96
Query: 873 FCSHARHS----FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDC 928
+ +IV EY++ +L I+ + + + + VI AL++ H +
Sbjct: 97 TGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQALNFSHQN- 152
Query: 929 FPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIG---YVAPELAYT 985
I++RD+ N+++ V DFGI++++ ++ T+ A IG Y++PE A
Sbjct: 153 --GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 210
Query: 986 MKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRD 1045
V +SDVYS G + E + G+ P S + ++ DP +P PS
Sbjct: 211 DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE------DP-IP-PSARHEG 262
Query: 1046 KLISIMEVAISCLDENPDSR 1065
+ V + L +NP++R
Sbjct: 263 LSADLDAVVLKALAKNPENR 282
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 26/215 (12%)
Query: 807 DFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLL---SEMTCQQEFLNEVKSLTEI 862
DF+ +G G G V+ AE + + A+K ++ ++ C ++ E
Sbjct: 19 DFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVEC---------TMVEK 69
Query: 863 RHRNIVKFYGFCSH-------ARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
R ++ + F +H + F V EYL G L + + S + ++
Sbjct: 70 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAA 126
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTI 975
+ L +LH+ IVYRD+ N+LLD + ++DFG+ K + E GT
Sbjct: 127 EIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTP 183
Query: 976 GYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
Y+APE+ K D +SFGVL E + G+ P
Sbjct: 184 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 73/291 (25%), Positives = 128/291 (43%), Gaps = 34/291 (11%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTE 861
N+ +G G G V A G+ AV K +L E ++E+K ++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 862 I-RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSN-----------ATSAEELGWTQ 909
+ +H NIV G C+H ++ EY G L L A + L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 910 RMNVIKGVADALSYLHN-DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNW 968
++ VA +++L + +C ++RD++++NVLL + A + DFG+++ + DS+
Sbjct: 166 LLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
Query: 969 TELAG--TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLD 1025
+ + ++APE + T +SDV+S+G+L E G +P I + S L
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI-LVNSKFYKLV 280
Query: 1026 RTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
+ ++ P AP + SIM+ +C P RPT Q++ L+
Sbjct: 281 KDGYQMAQPAF-APK-----NIYSIMQ---ACWALEPTHRPTFQQICSFLQ 322
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 10/197 (5%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G VY+A+ S G IVA+K+ E + E+ L E+ H NIV
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDE-GIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRM-NVIKGVADALSYLHNDCFPPI 932
R +V+E++E ++ N T ++ + +++GVA + I
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR-------I 140
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPE-LAYTMKVTEK 991
++RD+ +N+L++ + ++DFG++++ ++T T+ Y AP+ L + K +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 992 SDVYSFGVLALEAIKGK 1008
D++S G + E I GK
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 10/197 (5%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G VY+A+ S G IVA+K+ E + E+ L E+ H NIV
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDE-GIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRM-NVIKGVADALSYLHNDCFPPI 932
R +V+E++E ++ N T ++ + +++GVA + I
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR-------I 140
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPE-LAYTMKVTEK 991
++RD+ +N+L++ + ++DFG++++ ++T T+ Y AP+ L + K +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 992 SDVYSFGVLALEAIKGK 1008
D++S G + E I GK
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium
Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium
Tuberculosis Pknb
Length = 311
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G GG V+ A +L VAVK + L + + F E ++ + H IV Y
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 873 FCSHARHS----FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDC 928
+ +IV EY++ +L I+ + + + + VI AL++ H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQALNFSHQN- 135
Query: 929 FPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIG---YVAPELAYT 985
I++RD+ N+++ V DFGI++++ ++ T+ A IG Y++PE A
Sbjct: 136 --GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 986 MKVTEKSDVYSFGVLALEAIKGKHP 1010
V +SDVYS G + E + G+ P
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic
Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic
Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution
Length = 336
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 41/219 (18%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNE--VKSLTEIRHRNIVKFY 871
IG G G+VY+ L VAVK F +Q F+NE + + + H NI +F
Sbjct: 21 IGRGRYGAVYKGSLDE-RPVAVKVF------SFANRQNFINEKNIYRVPLMEHDNIARFI 73
Query: 872 ----GFCSHARHSFI-VYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
+ R ++ V EY GSL LS TS W + V L+YLH
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYLHT 129
Query: 927 DC------FPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL---------KPDSSNWTEL 971
+ P I +RD++S+NVL+ + +SDFG+S L + D++ +E+
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV 189
Query: 972 AGTIGYVAPEL---AYTMKVTEKS----DVYSFGVLALE 1003
GTI Y+APE+ A ++ E + D+Y+ G++ E
Sbjct: 190 -GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWE 227
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of
3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of
3brb-Pp1
Length = 298
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 12/210 (5%)
Query: 805 TNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIR 863
++ + + +G G G V + +G+ AVK + + T ++ L EV+ L ++
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 864 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSY 923
H NI+K Y F + ++V E G L S + +I+ V ++Y
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITY 147
Query: 924 LHNDCFPPIVYRDISSKNVLLDLEYE---AHVSDFGISKSLKPDSSNWTELAGTIGYVAP 980
+H + IV+RD+ +N+LL+ + + + DFG+S + S + GT Y+AP
Sbjct: 148 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAP 203
Query: 981 ELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
E+ + EK DV+S GV+ + G P
Sbjct: 204 EVLHG-TYDEKCDVWSTGVILYILLSGCPP 232
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 67.0 bits (162), Expect = 5e-11, Method: Composition-based stats.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G GG V+ A +L VAVK + L + + F E ++ + H IV Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 873 FCSHARHS----FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDC 928
+ +IV EY++ +L I+ + + + + VI AL++ H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQALNFSHQN- 135
Query: 929 FPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIG---YVAPELAYT 985
I++RD+ N+L+ V DFGI++++ ++ + A IG Y++PE A
Sbjct: 136 --GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARG 193
Query: 986 MKVTEKSDVYSFGVLALEAIKGKHP 1010
V +SDVYS G + E + G+ P
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 67.0 bits (162), Expect = 5e-11, Method: Composition-based stats.
Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 51/292 (17%)
Query: 806 NDFDEEHCIGTGGQGSVYRAELSSGEI---VAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
ND + IG G G V +A + + A+K+ + ++F E++ L ++
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE--YASKDDHRDFAGELEVLCKL 79
Query: 863 -RHRNIVKFYGFCSHARHSFIVYEYLEMGSL--------------AMILSNATSAEELGW 907
H NI+ G C H + ++ EY G+L A ++N+T A L
Sbjct: 80 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST-ASTLSS 138
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN 967
Q ++ VA + YL F ++R+++++N+L+ Y A ++DFG+S+ +
Sbjct: 139 QQLLHFAADVARGMDYLSQKQF---IHRNLAARNILVGENYVAKIADFGLSRGQE----- 190
Query: 968 WTELAGTIG-----YVAPE-LAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICS- 1019
+ T+G ++A E L Y++ T SDV+S+GVL E + G P C
Sbjct: 191 -VYVKKTMGRLPVRWMAIESLNYSVYTT-NSDVWSYGVLLWEIVSLGGTP------YCGM 242
Query: 1020 TSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
T + L L + RL P N D++ +M C E P RP+ ++
Sbjct: 243 TCAELYEKLPQ--GYRLEKP-LNCDDEVYDLMR---QCWREKPYERPSFAQI 288
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 67.0 bits (162), Expect = 5e-11, Method: Composition-based stats.
Identities = 63/280 (22%), Positives = 125/280 (44%), Gaps = 34/280 (12%)
Query: 814 IGTGGQGSVYRAELSSGEI-------VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
+G G G VY ++ G + VA+K + + M + EFLNE + E +
Sbjct: 18 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 74
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEE-------LGWTQRMNVIKGVAD 919
+V+ G S + + ++ E + G L L + E ++ + + +AD
Sbjct: 75 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 134
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG--TIGY 977
++YL+ + F V+RD++++N ++ ++ + DFG+++ + G + +
Sbjct: 135 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 191
Query: 978 VAPELAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDPRL 1036
++PE T SDV+SFGV+ E A + P +S+ ++ L +++ L
Sbjct: 192 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEGGL 243
Query: 1037 PAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
N D L+ +M + C NP RP+ ++ +K
Sbjct: 244 LDKPDNCPDMLLELMRM---CWQYNPKMRPSFLEIISSIK 280
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 67.0 bits (162), Expect = 6e-11, Method: Composition-based stats.
Identities = 63/282 (22%), Positives = 128/282 (45%), Gaps = 38/282 (13%)
Query: 814 IGTGGQGSVYRAELSSGEI-------VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
+G G G VY ++ G + VA+K + + M + EFLNE + E +
Sbjct: 33 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 89
Query: 867 IVKFYGFCSHARHSFIVYEYLEMG-------SLAMILSNATSAEELGWTQRMNVIKGVAD 919
+V+ G S + + ++ E + G SL ++N ++ + + +AD
Sbjct: 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT----I 975
++YL+ + F V+RD++++N ++ ++ + DFG+++ + +++ G +
Sbjct: 150 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 204
Query: 976 GYVAPELAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP 1034
+++PE T SDV+SFGV+ E A + P +S+ ++ L +++
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEG 256
Query: 1035 RLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
L N D L +M + C NP RP+ ++ +K
Sbjct: 257 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 295
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 67.0 bits (162), Expect = 6e-11, Method: Composition-based stats.
Identities = 63/282 (22%), Positives = 128/282 (45%), Gaps = 38/282 (13%)
Query: 814 IGTGGQGSVYRAELSSGEI-------VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
+G G G VY ++ G + VA+K + + M + EFLNE + E +
Sbjct: 23 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 79
Query: 867 IVKFYGFCSHARHSFIVYEYLEMG-------SLAMILSNATSAEELGWTQRMNVIKGVAD 919
+V+ G S + + ++ E + G SL ++N ++ + + +AD
Sbjct: 80 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 139
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT----I 975
++YL+ + F V+RD++++N ++ ++ + DFG+++ + +++ G +
Sbjct: 140 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 194
Query: 976 GYVAPELAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP 1034
+++PE T SDV+SFGV+ E A + P +S+ ++ L +++
Sbjct: 195 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEG 246
Query: 1035 RLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
L N D L +M + C NP RP+ ++ +K
Sbjct: 247 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 285
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 121/300 (40%), Gaps = 60/300 (20%)
Query: 802 VRATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLT 860
+R +DF+E +G G G V +A + A+KK T L+EV L
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI----LSEVMLLA 57
Query: 861 EIRHRNIVKFYGFCSHARHS-------------FIVYEYLEMGSLAMIL--SNATSAEEL 905
+ H+ +V++Y R+ FI EY E +L ++ N +
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE 117
Query: 906 GWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKS----- 960
W + + + +ALSY+H+ I++RD+ N+ +D + DFG++K+
Sbjct: 118 YW----RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 961 --LKPDSS-------NWTELAGTIGYVAPE-LAYTMKVTEKSDVYSFGVLALEAI----K 1006
LK DS N T GT YVA E L T EK D+YS G++ E I
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFST 230
Query: 1007 GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRP 1066
G + + + S S P + K+I ++ +D +P+ RP
Sbjct: 231 GMERVNILKKLRSVSIE--------FPPDFDDNKMKVEKKIIRLL------IDHDPNKRP 276
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 112/259 (43%), Gaps = 19/259 (7%)
Query: 814 IGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G GG + ++ + E+ A K LL + +++ E+ + H+++V F+G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
F F+V E SL L + L + ++ + YLH + +
Sbjct: 85 FFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 138
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
++RD+ N+ L+ + E + DFG++ ++ D L GT Y+APE+ + +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 993 DVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIME 1052
DV+S G + + GK P + C + L +E P+ P + LI M
Sbjct: 199 DVWSIGCIMYTLLVGKPP---FETSCLKETYLRIKKNEYSIPKHINP---VAASLIQKM- 251
Query: 1053 VAISCLDENPDSRPTMQKV 1071
L +P +RPT+ ++
Sbjct: 252 -----LQTDPTARPTINEL 265
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 59/260 (22%), Positives = 116/260 (44%), Gaps = 40/260 (15%)
Query: 803 RATNDFDEEHCIGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
R DF+ C+G GG G V+ A+ + A+K+ P + +++ + EVK+L +
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLP--NRELAREKVMREVKALAK 59
Query: 862 IRHRNIVKFYGFCSHAR-------HSFIVYEYLEMG-----SLAMILSNATSAEELGWTQ 909
+ H IV+++ S VY Y++M +L ++ + EE +
Sbjct: 60 LEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSV 119
Query: 910 RMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT 969
+++ +A+A+ +LH+ +++RD+ N+ ++ V DFG+ ++ D T
Sbjct: 120 CLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 970 ELA------------GTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSI 1017
L GT Y++PE + + K D++S G++ E + +P
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YP------- 226
Query: 1018 CSTSSNLDRTLDEILDPRLP 1037
ST RTL ++ + + P
Sbjct: 227 FSTQMERVRTLTDVRNLKFP 246
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 63/282 (22%), Positives = 127/282 (45%), Gaps = 38/282 (13%)
Query: 814 IGTGGQGSVYRAELSSGEI-------VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
+G G G VY ++ G + VA+K + + M + EFLNE + E +
Sbjct: 55 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 111
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEE-------LGWTQRMNVIKGVAD 919
+V+ G S + + ++ E + G L L + E ++ + + +AD
Sbjct: 112 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 171
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT----I 975
++YL+ + F V+RD++++N ++ ++ + DFG+++ + +++ G +
Sbjct: 172 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 226
Query: 976 GYVAPELAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP 1034
+++PE T SDV+SFGV+ E A + P +S+ ++ L +++
Sbjct: 227 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEG 278
Query: 1035 RLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
L N D L +M + C NP RP+ ++ +K
Sbjct: 279 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 317
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With
An Hydantoin Inhibitor
Length = 305
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 63/282 (22%), Positives = 127/282 (45%), Gaps = 38/282 (13%)
Query: 814 IGTGGQGSVYRAELSSGEI-------VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
+G G G VY ++ G + VA+K + + M + EFLNE + E +
Sbjct: 24 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 80
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEE-------LGWTQRMNVIKGVAD 919
+V+ G S + + ++ E + G L L + E ++ + + +AD
Sbjct: 81 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 140
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT----I 975
++YL+ + F V+RD++++N ++ ++ + DFG+++ + +++ G +
Sbjct: 141 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 195
Query: 976 GYVAPELAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP 1034
+++PE T SDV+SFGV+ E A + P +S+ ++ L +++
Sbjct: 196 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEG 247
Query: 1035 RLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
L N D L +M + C NP RP+ ++ +K
Sbjct: 248 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 286
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
Length = 301
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 63/282 (22%), Positives = 127/282 (45%), Gaps = 38/282 (13%)
Query: 814 IGTGGQGSVYRAELSSGEI-------VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
+G G G VY ++ G + VA+K + + M + EFLNE + E +
Sbjct: 20 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 76
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEE-------LGWTQRMNVIKGVAD 919
+V+ G S + + ++ E + G L L + E ++ + + +AD
Sbjct: 77 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT----I 975
++YL+ + F V+RD++++N ++ ++ + DFG+++ + +++ G +
Sbjct: 137 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 191
Query: 976 GYVAPELAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP 1034
+++PE T SDV+SFGV+ E A + P +S+ ++ L +++
Sbjct: 192 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEG 243
Query: 1035 RLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
L N D L +M + C NP RP+ ++ +K
Sbjct: 244 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 282
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 63/282 (22%), Positives = 127/282 (45%), Gaps = 38/282 (13%)
Query: 814 IGTGGQGSVYRAELSSGEI-------VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
+G G G VY ++ G + VA+K + + M + EFLNE + E +
Sbjct: 26 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 82
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEE-------LGWTQRMNVIKGVAD 919
+V+ G S + + ++ E + G L L + E ++ + + +AD
Sbjct: 83 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT----I 975
++YL+ + F V+RD++++N ++ ++ + DFG+++ + +++ G +
Sbjct: 143 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 197
Query: 976 GYVAPELAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP 1034
+++PE T SDV+SFGV+ E A + P +S+ ++ L +++
Sbjct: 198 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEG 249
Query: 1035 RLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
L N D L +M + C NP RP+ ++ +K
Sbjct: 250 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 288
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
Length = 308
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 63/280 (22%), Positives = 124/280 (44%), Gaps = 34/280 (12%)
Query: 814 IGTGGQGSVYRAELSSGEI-------VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
+G G G VY ++ G + VA+K + + M + EFLNE + E +
Sbjct: 27 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 83
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEE-------LGWTQRMNVIKGVAD 919
+V+ G S + + ++ E + G L L + E ++ + + +AD
Sbjct: 84 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG--TIGY 977
++YL+ + F V+RD++++N ++ ++ + DFG+++ + G + +
Sbjct: 144 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 200
Query: 978 VAPELAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDPRL 1036
++PE T SDV+SFGV+ E A + P +S+ ++ L +++ L
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEGGL 252
Query: 1037 PAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
N D L +M + C NP RP+ ++ +K
Sbjct: 253 LDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 289
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (34)
Length = 307
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 63/282 (22%), Positives = 127/282 (45%), Gaps = 38/282 (13%)
Query: 814 IGTGGQGSVYRAELSSGEI-------VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
+G G G VY ++ G + VA+K + + M + EFLNE + E +
Sbjct: 26 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 82
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEE-------LGWTQRMNVIKGVAD 919
+V+ G S + + ++ E + G L L + E ++ + + +AD
Sbjct: 83 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT----I 975
++YL+ + F V+RD++++N ++ ++ + DFG+++ + +++ G +
Sbjct: 143 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 197
Query: 976 GYVAPELAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP 1034
+++PE T SDV+SFGV+ E A + P +S+ ++ L +++
Sbjct: 198 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEG 249
Query: 1035 RLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
L N D L +M + C NP RP+ ++ +K
Sbjct: 250 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 288
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 63/282 (22%), Positives = 127/282 (45%), Gaps = 38/282 (13%)
Query: 814 IGTGGQGSVYRAELSSGEI-------VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
+G G G VY ++ G + VA+K + + M + EFLNE + E +
Sbjct: 33 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 89
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEE-------LGWTQRMNVIKGVAD 919
+V+ G S + + ++ E + G L L + E ++ + + +AD
Sbjct: 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 149
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT----I 975
++YL+ + F V+RD++++N ++ ++ + DFG+++ + +++ G +
Sbjct: 150 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 204
Query: 976 GYVAPELAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP 1034
+++PE T SDV+SFGV+ E A + P +S+ ++ L +++
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEG 256
Query: 1035 RLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
L N D L +M + C NP RP+ ++ +K
Sbjct: 257 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 295
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 63/282 (22%), Positives = 127/282 (45%), Gaps = 38/282 (13%)
Query: 814 IGTGGQGSVYRAELSSGEI-------VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
+G G G VY ++ G + VA+K + + M + EFLNE + E +
Sbjct: 27 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 83
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEE-------LGWTQRMNVIKGVAD 919
+V+ G S + + ++ E + G L L + E ++ + + +AD
Sbjct: 84 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT----I 975
++YL+ + F V+RD++++N ++ ++ + DFG+++ + +++ G +
Sbjct: 144 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 198
Query: 976 GYVAPELAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP 1034
+++PE T SDV+SFGV+ E A + P +S+ ++ L +++
Sbjct: 199 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEG 250
Query: 1035 RLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
L N D L +M + C NP RP+ ++ +K
Sbjct: 251 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 289
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 67/277 (24%), Positives = 122/277 (44%), Gaps = 43/277 (15%)
Query: 824 RAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIV 883
RA ++ + +K+ SP SE+ ++ L+E L ++ H +++K YG CS ++
Sbjct: 50 RAGYTTVAVKMLKENASP--SEL---RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLI 104
Query: 884 YEYLEMGSLAMILSNATSA---------------------EELGWTQRMNVIKGVADALS 922
EY + GSL L + L ++ ++ +
Sbjct: 105 VEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQ 164
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTI--GYVAP 980
YL +V+RD++++N+L+ + +SDFG+S+ + + S G I ++A
Sbjct: 165 YLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAI 221
Query: 981 ELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAP 1039
E + T +SDV+SFGVL E + G +P I NL +T R+ P
Sbjct: 222 ESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP--ERLFNLLKT-----GHRMERP 274
Query: 1040 SCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
N +++ +M + C + PD RP +S+ L+
Sbjct: 275 D-NCSEEMYRLM---LQCWKQEPDKRPVFADISKDLE 307
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A 2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 112/259 (43%), Gaps = 19/259 (7%)
Query: 814 IGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G GG + ++ + E+ A K LL + +++ E+ + H+++V F+G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
F F+V E SL L + L + ++ + YLH + +
Sbjct: 85 FFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 138
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
++RD+ N+ L+ + E + DFG++ ++ D L GT Y+APE+ + +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 993 DVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIME 1052
DV+S G + + GK P + C + L +E P+ P + LI M
Sbjct: 199 DVWSIGCIMYTLLVGKPP---FETSCLKETYLRIKKNEYSIPKHINP---VAASLIQKM- 251
Query: 1053 VAISCLDENPDSRPTMQKV 1071
L +P +RPT+ ++
Sbjct: 252 -----LQTDPTARPTINEL 265
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 808 FDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQ---EFLNEVKSLTEIR 863
+D + IG G V R ++G AVK + E+T ++ E L EV+ T
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVK------IMEVTAERLSPEQLEEVREATRRE 149
Query: 864 ---------HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVI 914
H +I+ + F+V++ + G L L+ + E + +++
Sbjct: 150 THILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSE---KETRSIM 206
Query: 915 KGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT 974
+ + +A+S+LH + IV+RD+ +N+LLD + +SDFG S L+P EL GT
Sbjct: 207 RSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEP-GEKLRELCGT 262
Query: 975 IGYVAPE-LAYTMKVT-----EKSDVYSFGVLALEAIKGKHP 1010
GY+APE L +M T ++ D+++ GV+ + G P
Sbjct: 263 PGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 112/259 (43%), Gaps = 19/259 (7%)
Query: 814 IGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G GG + ++ + E+ A K LL + +++ E+ + H+++V F+G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
F F+V E SL L + L + ++ + YLH + +
Sbjct: 89 FFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 142
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
++RD+ N+ L+ + E + DFG++ ++ D L GT Y+APE+ + +
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 202
Query: 993 DVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIME 1052
DV+S G + + GK P + C + L +E P+ P + LI M
Sbjct: 203 DVWSIGCIMYTLLVGKPP---FETSCLKETYLRIKKNEYSIPKHINP---VAASLIQKM- 255
Query: 1053 VAISCLDENPDSRPTMQKV 1071
L +P +RPT+ ++
Sbjct: 256 -----LQTDPTARPTINEL 269
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 805 TNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIR 863
++ + + +G G G V + +G+ AVK + + T ++ L EV+ L ++
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 864 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSY 923
H NI+K Y F + ++V E G L S + +I+ V ++Y
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITY 165
Query: 924 LHNDCFPPIVYRDISSKNVLLDLEYEA---HVSDFGISKSLKPDSSNWTELAGTIGYVAP 980
+H + IV+RD+ +N+LL+ + + + DFG+S + S + GT Y+AP
Sbjct: 166 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAP 221
Query: 981 ELAYTMKVTEKSDVYSFGVL 1000
E+ + EK DV+S GV+
Sbjct: 222 EVLHGT-YDEKCDVWSTGVI 240
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 805 TNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIR 863
++ + + +G G G V + +G+ AVK + + T ++ L EV+ L ++
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 864 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSY 923
H NI+K Y F + ++V E G L S + +I+ V ++Y
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITY 164
Query: 924 LHNDCFPPIVYRDISSKNVLLDLEYEA---HVSDFGISKSLKPDSSNWTELAGTIGYVAP 980
+H + IV+RD+ +N+LL+ + + + DFG+S + S + GT Y+AP
Sbjct: 165 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAP 220
Query: 981 ELAYTMKVTEKSDVYSFGVL 1000
E+ + EK DV+S GV+
Sbjct: 221 EVLHGT-YDEKCDVWSTGVI 239
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 12/194 (6%)
Query: 811 EHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVK 869
+ +G G G V + +G+ AVK + + T ++ L EV+ L ++ H NI+K
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 90
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
Y F + ++V E G L S + +I+ V ++Y+H +
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITYMHKN-- 145
Query: 930 PPIVYRDISSKNVLLDLEYEA---HVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTM 986
IV+RD+ +N+LL+ + + + DFG+S + S + GT Y+APE+ +
Sbjct: 146 -KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAPEVLHGT 203
Query: 987 KVTEKSDVYSFGVL 1000
EK DV+S GV+
Sbjct: 204 -YDEKCDVWSTGVI 216
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An Arylamide
Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 125/285 (43%), Gaps = 36/285 (12%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTEI-RHRNIV 868
+G G G V A G+ AV K +L E ++E+K ++ + +H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 869 KFYGFCSHARHSFIVYEYLEMGSLAMILSNATS-------------AEELGWTQRMNVIK 915
G C+H ++ EY G L L E+L ++
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 916 GVADALSYL-HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT 974
VA +++L +C ++RD++++NVLL + A + DFG+++ + DS+ +
Sbjct: 174 QVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 229
Query: 975 --IGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEI 1031
+ ++APE + T +SDV+S+G+L E G +P I + S L + ++
Sbjct: 230 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI-LVNSKFYKLVKDGYQM 288
Query: 1032 LDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
P AP + SIM+ +C P RPT Q++ L+
Sbjct: 289 AQPAF-APK-----NIYSIMQ---ACWALEPTHRPTFQQICSFLQ 324
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 67/277 (24%), Positives = 122/277 (44%), Gaps = 43/277 (15%)
Query: 824 RAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIV 883
RA ++ + +K+ SP SE+ ++ L+E L ++ H +++K YG CS ++
Sbjct: 50 RAGYTTVAVKMLKENASP--SEL---RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLI 104
Query: 884 YEYLEMGSLAMILSNATSA---------------------EELGWTQRMNVIKGVADALS 922
EY + GSL L + L ++ ++ +
Sbjct: 105 VEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQ 164
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTI--GYVAP 980
YL +V+RD++++N+L+ + +SDFG+S+ + + S G I ++A
Sbjct: 165 YLAE---MSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAI 221
Query: 981 ELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAP 1039
E + T +SDV+SFGVL E + G +P I NL +T R+ P
Sbjct: 222 ESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP--ERLFNLLKT-----GHRMERP 274
Query: 1040 SCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
N +++ +M + C + PD RP +S+ L+
Sbjct: 275 D-NCSEEMYRLM---LQCWKQEPDKRPVFADISKDLE 307
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 125/278 (44%), Gaps = 47/278 (16%)
Query: 807 DFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
+FD + G+GS G++ V+K + + M +++N+ K + RN
Sbjct: 13 NFDHFEILRAIGKGSF-------GKVCIVQKNDTKKMYAM----KYMNKQKCVERNEVRN 61
Query: 867 IVKFYGFCSHARHSFIV---YEYLEMGSLAMIL-------------SNATSAEELGWTQR 910
+ K H F+V Y + + + M++ N EE T +
Sbjct: 62 VFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE---TVK 118
Query: 911 MNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTE 970
+ + + V AL YL N I++RD+ N+LLD H++DF I+ L P + T
Sbjct: 119 LFICELVM-ALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITT 173
Query: 971 LAGTIGYVAPELAYTMKVTEKS---DVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRT 1027
+AGT Y+APE+ + K S D +S GV A E ++G+ P SS ++S + T
Sbjct: 174 MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS--TSSKEIVHT 231
Query: 1028 LDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSR 1065
+ + + PS +++S+++ L+ NPD R
Sbjct: 232 FETTV---VTYPSA-WSQEMVSLLK---KLLEPNPDQR 262
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 15/204 (7%)
Query: 814 IGTGGQGSVYRA--ELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
+G G GSV + + +I VA+K +E +E + E + + ++ + IV+
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLDNPYIVRL 401
Query: 871 YGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
G C A +V E G L L EE+ + ++ V+ + YL F
Sbjct: 402 IGVC-QAEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEKNF- 457
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG---TIGYVAPELAYTMK 987
V+R+++++NVLL + A +SDFG+SK+L D S +T + + + APE K
Sbjct: 458 --VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 515
Query: 988 VTEKSDVYSFGVLALEAIK-GKHP 1010
+ +SDV+S+GV EA+ G+ P
Sbjct: 516 FSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase
Domain
Length = 314
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 67/277 (24%), Positives = 122/277 (44%), Gaps = 43/277 (15%)
Query: 824 RAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIV 883
RA ++ + +K+ SP SE+ ++ L+E L ++ H +++K YG CS ++
Sbjct: 50 RAGYTTVAVKMLKENASP--SEL---RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLI 104
Query: 884 YEYLEMGSLAMILSNATSA---------------------EELGWTQRMNVIKGVADALS 922
EY + GSL L + L ++ ++ +
Sbjct: 105 VEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQ 164
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTI--GYVAP 980
YL +V+RD++++N+L+ + +SDFG+S+ + + S G I ++A
Sbjct: 165 YLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAI 221
Query: 981 ELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAP 1039
E + T +SDV+SFGVL E + G +P I NL +T R+ P
Sbjct: 222 ESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP--ERLFNLLKT-----GHRMERP 274
Query: 1040 SCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
N +++ +M + C + PD RP +S+ L+
Sbjct: 275 D-NCSEEMYRLM---LQCWKQEPDKRPVFADISKDLE 307
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 12/210 (5%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
D+D +G G G V A + E VAVK + + C + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
N+VKFYG H R I Y +LE S + + + + YLH
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN--WTELAGTIGYVAPELA 983
I +RDI +N+LLD +SDFG++ + ++ ++ GT+ YVAPEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 984 YTMKV-TEKSDVYSFGVLALEAIKGKHPRD 1012
+ E DV+S G++ + G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In Complex
With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The Insulin
Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The Insulin
Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Phosphopeptide
Length = 306
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 64/279 (22%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 814 IGTGGQGSVYRA---ELSSGEI---VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
+G G G VY ++ GE VAVK + + + + EFLNE + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 82
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELG-------WTQRMNVIKGVADA 920
V+ G S + + +V E + G L L + E + + + +AD
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 921 LSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG--TIGYV 978
++YL+ F V+RD++++N ++ ++ + DFG+++ + G + ++
Sbjct: 143 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 979 APELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLP 1037
APE T SD++SFGV+ E + P +S+ ++ L ++D
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------EQVLKFVMDGGYL 251
Query: 1038 APSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
N +++ +M + C NP+ RPT ++ LLK
Sbjct: 252 DQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLK 287
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
Length = 327
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 19/215 (8%)
Query: 809 DEEHCIG------TGGQGSVYRAELS----SGEIVAVKKFHSPLLSEMTCQQEFLNEVKS 858
DE+ IG T G+G+ + +L+ +G+ VAV+ L+ + Q+ F EV+
Sbjct: 8 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF-REVRI 66
Query: 859 LTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVA 918
+ + H NIVK + + ++V EY G + L +E + + +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFRQIV 123
Query: 919 DALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYV 978
A+ Y H IV+RD+ ++N+LLD + ++DFG S + E G+ Y
Sbjct: 124 SAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDEFCGSPPYA 179
Query: 979 APELAYTMKVT-EKSDVYSFGVLALEAIKGKHPRD 1012
APEL K + DV+S GV+ + G P D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 63/282 (22%), Positives = 127/282 (45%), Gaps = 38/282 (13%)
Query: 814 IGTGGQGSVYRAELSSGEI-------VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
+G G G VY ++ G + VA+K + + M + EFLNE + E +
Sbjct: 20 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 76
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEE-------LGWTQRMNVIKGVAD 919
+V+ G S + + ++ E + G L L + E ++ + + +AD
Sbjct: 77 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT----I 975
++YL+ + F V+RD++++N + ++ + DFG+++ + +++ G +
Sbjct: 137 GMAYLNANKF---VHRDLAARNCXVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 191
Query: 976 GYVAPELAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP 1034
+++PE T SDV+SFGV+ E A + P +S+ ++ L +++
Sbjct: 192 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLRFVMEG 243
Query: 1035 RLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
L N D L+ +M + C NP RP+ ++ +K
Sbjct: 244 GLLDKPDNCPDMLLELMRM---CWQYNPKMRPSFLEIISSIK 282
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 112/259 (43%), Gaps = 19/259 (7%)
Query: 814 IGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G GG + ++ + E+ A K LL + +++ E+ + H+++V F+G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
F F+V E SL L + L + ++ + YLH + +
Sbjct: 107 FFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 160
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
++RD+ N+ L+ + E + DFG++ ++ D L GT Y+APE+ + +
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 220
Query: 993 DVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIME 1052
DV+S G + + GK P + C + L +E P+ P + LI M
Sbjct: 221 DVWSIGCIMYTLLVGKPP---FETSCLKETYLRIKKNEYSIPKHINP---VAASLIQKM- 273
Query: 1053 VAISCLDENPDSRPTMQKV 1071
L +P +RPT+ ++
Sbjct: 274 -----LQTDPTARPTINEL 287
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 68/285 (23%), Positives = 130/285 (45%), Gaps = 30/285 (10%)
Query: 796 IAYEEIVRATNDFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQ 850
+A I++ T +F + +G+G G+VY+ + GE V A+K+ + +
Sbjct: 3 MALLRILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANK 59
Query: 851 EFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQR 910
E L+E + + + ++ + G C + I + + G L + + +G
Sbjct: 60 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE--HKDNIGSQYL 116
Query: 911 MNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTE 970
+N +A+ ++YL + +V+RD++++NVL+ ++DFG++K L + +
Sbjct: 117 LNWCVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 173
Query: 971 LAGT--IGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRT 1027
G I ++A E T +SDV+S+GV E + G P D I + SS L++
Sbjct: 174 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK- 231
Query: 1028 LDEILDPRLPAPS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RLP P C I + + + C + DSRP +++
Sbjct: 232 -----GERLPQPPICT-----IDVYMIMVKCWMIDADSRPKFREL 266
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase
1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase
1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 112/259 (43%), Gaps = 19/259 (7%)
Query: 814 IGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G GG + ++ + E+ A K LL + +++ E+ + H+++V F+G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
F F+V E SL L + L + ++ + YLH + +
Sbjct: 109 FFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 162
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
++RD+ N+ L+ + E + DFG++ ++ D L GT Y+APE+ + +
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 222
Query: 993 DVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIME 1052
DV+S G + + GK P + C + L +E P+ P + LI M
Sbjct: 223 DVWSIGCIMYTLLVGKPP---FETSCLKETYLRIKKNEYSIPKHINP---VAASLIQKM- 275
Query: 1053 VAISCLDENPDSRPTMQKV 1071
L +P +RPT+ ++
Sbjct: 276 -----LQTDPTARPTINEL 289
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 119/245 (48%), Gaps = 30/245 (12%)
Query: 795 KIAYEEIVRATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFL 853
K A+E VRA + + +G+G G+V A + +G VA+KK + P SE+ ++ +
Sbjct: 18 KTAWE--VRAV--YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAY- 72
Query: 854 NEVKSLTEIRHRNIVKFYGFCS--HARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRM 911
E++ L +RH N++ + F + YL M + L E+LG +
Sbjct: 73 RELRLLKHMRHENVIGLLDVFTPDETLDDFTDF-YLVMPFMGTDLGKLMKHEKLGEDRIQ 131
Query: 912 NVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTEL 971
++ + L Y+H I++RD+ N+ ++ + E + DFG+++ + DS E+
Sbjct: 132 FLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLAR--QADS----EM 182
Query: 972 AGTI---GYVAPELAYT-MKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRT 1027
G + Y APE+ M+ T+ D++S G + E I GK ++ S +LD+
Sbjct: 183 XGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK-------TLFKGSDHLDQ- 234
Query: 1028 LDEIL 1032
L EI+
Sbjct: 235 LKEIM 239
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 132/292 (45%), Gaps = 53/292 (18%)
Query: 811 EHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTE-IRHRNIVK 869
E +G G G+V G VAVK+ +L + C + E+K LTE H N+++
Sbjct: 38 EKILGYGSSGTVVFQGSFQGRPVAVKR----MLIDF-CDIALM-EIKLLTESDDHPNVIR 91
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMN---VIKGVADALSYLHN 926
+Y + R +I E + ++ S S E L + N +++ +A +++LH+
Sbjct: 92 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 927 DCFPPIVYRDISSKNVLL--------DLEYEAH-----VSDFGISKSLKPDS----SNWT 969
I++RD+ +N+L+ D + A +SDFG+ K L N
Sbjct: 152 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 970 ELAGTIGYVAPEL---AYTMKVTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLD 1025
+GT G+ APEL + ++T D++S G + + KGKHP S SN+
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP---FGDKYSRESNII 265
Query: 1026 R---TLDEIL---DPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
R +LDE+ D L A + + LIS M +D +P RPT KV
Sbjct: 266 RGIFSLDEMKCLHDRSLIAEATD----LISQM------IDHDPLKRPTAMKV 307
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 12/202 (5%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G+G G V+ E S + V K + S++ +Q E++ L + H NI+K +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQ-IEAEIEVLKSLDHPNIIKIFEV 88
Query: 874 CSHARHSFIVYEYLEMGS-LAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
+ +IV E E G L I+S + L ++K + +AL+Y H+ +
Sbjct: 89 FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HV 145
Query: 933 VYRDISSKNVLLDLEYEAH----VSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKV 988
V++D+ +N+L + H + DFG+++ K D + T AGT Y+APE+ + V
Sbjct: 146 VHKDLKPENILFQ-DTSPHSPIKIIDFGLAELFKSDEHS-TNAAGTALYMAPEV-FKRDV 202
Query: 989 TEKSDVYSFGVLALEAIKGKHP 1010
T K D++S GV+ + G P
Sbjct: 203 TFKCDIWSAGVVMYFLLTGCLP 224
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
Length = 448
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 132/292 (45%), Gaps = 53/292 (18%)
Query: 811 EHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTE-IRHRNIVK 869
E +G G G+V G VAVK+ +L + C + E+K LTE H N+++
Sbjct: 38 EKILGYGSSGTVVFQGSFQGRPVAVKR----MLIDF-CDIALM-EIKLLTESDDHPNVIR 91
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMN---VIKGVADALSYLHN 926
+Y + R +I E + ++ S S E L + N +++ +A +++LH+
Sbjct: 92 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 927 DCFPPIVYRDISSKNVLL--------DLEYEAH-----VSDFGISKSLKPDS----SNWT 969
I++RD+ +N+L+ D + A +SDFG+ K L N
Sbjct: 152 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 970 ELAGTIGYVAPEL---AYTMKVTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTSSNLD 1025
+GT G+ APEL + ++T D++S G + + KGKHP S SN+
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP---FGDKYSRESNII 265
Query: 1026 R---TLDEIL---DPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
R +LDE+ D L A + + LIS M +D +P RPT KV
Sbjct: 266 RGIFSLDEMKCLHDRSLIAEATD----LISQM------IDHDPLKRPTAMKV 307
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/279 (22%), Positives = 121/279 (43%), Gaps = 32/279 (11%)
Query: 814 IGTGGQGSVYRA---ELSSGEI---VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
+G G G VY ++ GE VAVK + + + + EFLNE + ++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 79
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELG-------WTQRMNVIKGVADA 920
V+ G S + + +V E + G L L + E + + + +AD
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 921 LSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG--TIGYV 978
++YL+ F V+RD++++N ++ ++ + DFG+++ + G + ++
Sbjct: 140 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 979 APELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLP 1037
APE T SD++SFGV+ E + P +S+ ++ L ++D
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------EQVLKFVMDGGYL 248
Query: 1038 APSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
N +++ +M + C NP RPT ++ LLK
Sbjct: 249 DQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLK 284
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 132/296 (44%), Gaps = 57/296 (19%)
Query: 811 EHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTE-IRHRNIVK 869
E +G G G+V G VAVK+ +L + C + E+K LTE H N+++
Sbjct: 20 EKILGYGSSGTVVFQGSFQGRPVAVKR----MLIDF-CDIALM-EIKLLTESDDHPNVIR 73
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMN---VIKGVADALSYLHN 926
+Y + R +I E + ++ S S E L + N +++ +A +++LH+
Sbjct: 74 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 927 DCFPPIVYRDISSKNVLL--------DLEYEAH-----VSDFGISKSLKPDSS----NWT 969
I++RD+ +N+L+ D + A +SDFG+ K L S N
Sbjct: 134 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLN 190
Query: 970 ELAGTIGYVAPE-------LAYTMKVTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTS 1021
+GT G+ APE L ++T D++S G + + KGKHP S
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP---FGDKYSRE 247
Query: 1022 SNLDR---TLDEIL---DPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
SN+ R +LDE+ D L A + + LIS M +D +P RPT KV
Sbjct: 248 SNIIRGIFSLDEMKCLHDRSLIAEATD----LISQM------IDHDPLKRPTAMKV 293
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 835 VKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 894
++KFH +E NE+ L + H NI+K + ++ ++V E+ E G L
Sbjct: 86 IEKFH----------EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFE 135
Query: 895 ILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLE---YEAH 951
+ N +E N++K + + YLH IV+RDI +N+LL+ +
Sbjct: 136 QIINRHKFDE---CDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIK 189
Query: 952 VSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVL 1000
+ DFG+S D L GT Y+APE+ K EK DV+S GV+
Sbjct: 190 IVDFGLSSFFSKDYKLRDRL-GTAYYIAPEVL-KKKYNEKCDVWSCGVI 236
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/281 (22%), Positives = 124/281 (44%), Gaps = 36/281 (12%)
Query: 814 IGTGGQGSVYRA---ELSSGEI---VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
+G G G VY ++ GE VAVK + + + + EFLNE + ++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 81
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELG-------WTQRMNVIKGVADA 920
V+ G S + + +V E + G L L + E + + + +AD
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 921 LSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT----IG 976
++YL+ F V+RD++++N ++ ++ + DFG+++ + +++ G +
Sbjct: 142 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVR 196
Query: 977 YVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPR 1035
++APE T SD++SFGV+ E + P +S+ ++ L ++D
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------EQVLKFVMDGG 248
Query: 1036 LPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
N +++ +M + C NP RPT ++ LLK
Sbjct: 249 YLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLK 286
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human
Insulin Receptor
Length = 306
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/281 (22%), Positives = 124/281 (44%), Gaps = 36/281 (12%)
Query: 814 IGTGGQGSVYRA---ELSSGEI---VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
+G G G VY ++ GE VAVK + + + + EFLNE + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 82
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELG-------WTQRMNVIKGVADA 920
V+ G S + + +V E + G L L + E + + + +AD
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 921 LSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT----IG 976
++YL+ F V+RD++++N ++ ++ + DFG+++ + +++ G +
Sbjct: 143 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVR 197
Query: 977 YVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPR 1035
++APE T SD++SFGV+ E + P +S+ ++ L ++D
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------EQVLKFVMDGG 249
Query: 1036 LPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
N +++ +M + C NP RPT ++ LLK
Sbjct: 250 YLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLK 287
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With A Bisubstrate Inhibitor
Length = 306
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/279 (22%), Positives = 121/279 (43%), Gaps = 32/279 (11%)
Query: 814 IGTGGQGSVYRA---ELSSGEI---VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
+G G G VY ++ GE VAVK + + + + EFLNE + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 82
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELG-------WTQRMNVIKGVADA 920
V+ G S + + +V E + G L L + E + + + +AD
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 921 LSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG--TIGYV 978
++YL+ F V+RD++++N ++ ++ + DFG+++ + G + ++
Sbjct: 143 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 979 APELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLP 1037
APE T SD++SFGV+ E + P +S+ ++ L ++D
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------EQVLKFVMDGGYL 251
Query: 1038 APSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
N +++ +M + C NP RPT ++ LLK
Sbjct: 252 DQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLK 287
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 69/276 (25%), Positives = 118/276 (42%), Gaps = 32/276 (11%)
Query: 814 IGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G G G V + +G IVA+KKF +M ++ + E+K L ++RH N+V
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMV-KKIAMREIKLLKQLRHENLVNLLE 91
Query: 873 FCSHARHSFIVYEYLEMGSL--AMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
C + ++V+E+++ L + N + + +I G+ + HN
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQ-KYLFQIINGIG--FCHSHN---- 144
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY-TMKVT 989
I++RDI +N+L+ + DFG +++L + + T Y APEL +K
Sbjct: 145 -IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYG 203
Query: 990 EKSDVYSFGVLALEAIKGK------HPRDFISSICSTSSNLDRTLDEILDP-------RL 1036
+ DV++ G L E G+ D + I NL E+ + RL
Sbjct: 204 KAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRL 263
Query: 1037 P-----APSCNIRDKLIS-IMEVAISCLDENPDSRP 1066
P P KL ++++A CL +PD RP
Sbjct: 264 PEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRP 299
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
Length = 319
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 816 TGGQGSVYRAELS----SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFY 871
T G+G+ + +L+ +G+ VAVK L+ + Q+ F EV+ + + H NIVK +
Sbjct: 14 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLF 72
Query: 872 GFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNV---IKGVADALSYLHNDC 928
+ ++V EY G + L GW + + + A+ Y H
Sbjct: 73 EVIETEKTLYLVMEYASGGEVFDYLVAH------GWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 929 FPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKV 988
IV+RD+ ++N+LLD + ++DFG S + G+ Y APEL K
Sbjct: 127 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSPPYAAPELFQGKKY 182
Query: 989 T-EKSDVYSFGVLALEAIKGKHPRD 1012
+ DV+S GV+ + G P D
Sbjct: 183 DGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 59/259 (22%), Positives = 112/259 (43%), Gaps = 19/259 (7%)
Query: 814 IGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G GG + ++ + E+ A K LL + +++ E+ + H+++V F+G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
F F+V E SL + + E + ++ + YLH + +
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTE---PEARYYLRQIVLGCQYLHRN---RV 136
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS 992
++RD+ N+ L+ + E + DFG++ ++ D L GT Y+APE+ + +
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 196
Query: 993 DVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIME 1052
DV+S G + + GK P + C + L +E P+ P + LI M
Sbjct: 197 DVWSIGCIMYTLLVGKPP---FETSCLKETYLRIKKNEYSIPKHINP---VAASLIQKM- 249
Query: 1053 VAISCLDENPDSRPTMQKV 1071
L +P +RPT+ ++
Sbjct: 250 -----LQTDPTARPTINEL 263
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 121/299 (40%), Gaps = 58/299 (19%)
Query: 802 VRATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLT 860
+R +DF+E +G G G V +A + A+KK T L+EV L
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI----LSEVXLLA 57
Query: 861 EIRHRNIVKFYGFCSHARHS-------------FIVYEYLEMGSLAMIL--SNATSAEEL 905
+ H+ +V++Y R+ FI EY E +L ++ N +
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDE 117
Query: 906 GWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKS----- 960
W + + + +ALSY+H+ I++R++ N+ +D + DFG++K+
Sbjct: 118 YW----RLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 961 --LKPDSS-------NWTELAGTIGYVAPE-LAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
LK DS N T GT YVA E L T EK D YS G++ E I
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI----- 225
Query: 1011 RDFISSICSTSSNLDRTLDEI---LDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRP 1066
+ S N+ + L + P + K+I ++ +D +P+ RP
Sbjct: 226 --YPFSTGXERVNILKKLRSVSIEFPPDFDDNKXKVEKKIIRLL------IDHDPNKRP 276
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
N+F+ +G G G V E ++G A+K ++ L E + L RH
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 865 RNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKG-VADALS 922
+ Y F +H R F++ EY G L LS E R + AL
Sbjct: 68 PFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSE----DRARFYGAEIVSALD 122
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
YLH++ +VYRD+ +N++LD + ++DFG+ K D + GT Y+APE+
Sbjct: 123 YLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV 180
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
D + GV+ E + G+ P
Sbjct: 181 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
N+F+ +G G G V E ++G A+K ++ L E + L RH
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 865 RNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKG-VADALS 922
+ Y F +H R F++ EY G L LS E R + AL
Sbjct: 69 PFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSE----DRARFYGAEIVSALD 123
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
YLH++ +VYRD+ +N++LD + ++DFG+ K D + GT Y+APE+
Sbjct: 124 YLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV 181
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
D + GV+ E + G+ P
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide
And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide
And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
N+F+ +G G G V E ++G A+K ++ L E + L RH
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 865 RNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKG-VADALS 922
+ Y F +H R F++ EY G L LS E R + AL
Sbjct: 70 PFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSE----DRARFYGAEIVSALD 124
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
YLH++ +VYRD+ +N++LD + ++DFG+ K D + GT Y+APE+
Sbjct: 125 YLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV 182
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
D + GV+ E + G+ P
Sbjct: 183 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 124/274 (45%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 74
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I+ + + G L + + +G +N +A +
Sbjct: 75 VDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 131
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG++K L + + G I ++A
Sbjct: 132 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 189 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 241
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + + C + DSRP +++
Sbjct: 242 PPICT-----IDVYMIMVKCWMIDADSRPKFREL 270
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + ++ VA+KK SP + CQ+ L E+K L RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 88
Query: 873 FC-----SHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +IV + +E ++ + S + + + + + L Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 142
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAY 984
+++RD+ N+LL+ + + DFG+++ PD + TE T Y APE+
Sbjct: 143 --ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 985 TMKVTEKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
K KS D++S G + E + GKH D ++ I
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 124/274 (45%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 75
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I+ + + G L + + +G +N +A +
Sbjct: 76 VDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 132
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG++K L + + G I ++A
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 242
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + + C + DSRP +++
Sbjct: 243 PPICT-----IDVYMIMVKCWMIDADSRPKFREL 271
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 124/274 (45%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 76
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I+ + + G L + + +G +N +A +
Sbjct: 77 VDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 133
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG++K L + + G I ++A
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 243
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + + C + DSRP +++
Sbjct: 244 PPICT-----IDVYMIMVKCWMIDADSRPKFREL 272
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 124/274 (45%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 77
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I+ + + G L + + +G +N +A +
Sbjct: 78 VDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 134
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG++K L + + G I ++A
Sbjct: 135 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 192 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 244
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + + C + DSRP +++
Sbjct: 245 PPICT-----IDVYMIMVKCWMIDADSRPKFREL 273
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 124/274 (45%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 74
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I+ + + G L + + +G +N +A +
Sbjct: 75 VDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 131
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG++K L + + G I ++A
Sbjct: 132 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 189 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 241
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + + C + DSRP +++
Sbjct: 242 PPICT-----IDVYMIMVKCWMIDADSRPKFREL 270
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 124/274 (45%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 73
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I+ + + G L + + +G +N +A +
Sbjct: 74 VDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 130
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG++K L + + G I ++A
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 240
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + + C + DSRP +++
Sbjct: 241 PPICT-----IDVYMIMVKCWMIDADSRPKFREL 269
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + ++ VA+KK SP + CQ+ L E+K L RH NI+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 108
Query: 873 FC-----SHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +IV + +E ++ + S + + + + + L Y+H+
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 162
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAY 984
+++RD+ N+LL+ + + DFG+++ PD + TE T Y APE+
Sbjct: 163 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 985 TMKVTEKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
K KS D++S G + E + GKH D ++ I
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into
Receptor Autoregulation
Length = 343
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 106/229 (46%), Gaps = 38/229 (16%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE------LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSL 859
N+ + IG G G V++A +VAVK ++M Q +F E +
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADM--QADFQREAALM 104
Query: 860 TEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSN--------------ATSAE-- 903
E + NIVK G C+ + +++EY+ G L L + +T A
Sbjct: 105 AEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 164
Query: 904 -----ELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGIS 958
L +++ + + VA ++YL F V+RD++++N L+ ++DFG+S
Sbjct: 165 SPGPPPLSCAEQLCIARQVAAGMAYLSERKF---VHRDLATRNCLVGENMVVKIADFGLS 221
Query: 959 KSLKPDSSNWTELAGT----IGYVAPELAYTMKVTEKSDVYSFGVLALE 1003
+++ S+++ + G I ++ PE + + T +SDV+++GV+ E
Sbjct: 222 RNIY--SADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWE 268
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + ++ VA+KK SP + CQ+ L E+K L RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 88
Query: 873 FC-----SHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +IV + +E ++ + S + + + + + L Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 142
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAY 984
+++RD+ N+LL+ + + DFG+++ PD + TE T Y APE+
Sbjct: 143 --ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 985 TMKVTEKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
K KS D++S G + E + GKH D ++ I
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + ++ VA+KK SP + CQ+ L E+K L RH NI+
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 96
Query: 873 FC-----SHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +IV + +E ++ + S + + + + + L Y+H+
Sbjct: 97 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 150
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAY 984
+++RD+ N+LL+ + + DFG+++ PD + TE T Y APE+
Sbjct: 151 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 208
Query: 985 TMKVTEKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
K KS D++S G + E + GKH D ++ I
Sbjct: 209 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 248
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + ++ VA+KK SP + CQ+ L E+K L RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 88
Query: 873 FC-----SHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +IV + +E ++ + S + + + + + L Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 142
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAY 984
+++RD+ N+LL+ + + DFG+++ PD + TE T Y APE+
Sbjct: 143 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 985 TMKVTEKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
K KS D++S G + E + GKH D ++ I
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + ++ VA+KK SP + CQ+ L E+K L RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 88
Query: 873 FC-----SHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +IV + +E ++ + S + + + + + L Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 142
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAY 984
+++RD+ N+LL+ + + DFG+++ PD + TE T Y APE+
Sbjct: 143 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 985 TMKVTEKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
K KS D++S G + E + GKH D ++ I
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 809 DEEHCIG------TGGQGSVYRAELS----SGEIVAVKKFHSPLLSEMTCQQEFLNEVKS 858
DE+ IG T G+G+ + +L+ +G+ VAVK L+ + Q+ F EV+
Sbjct: 8 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRI 66
Query: 859 LTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVA 918
+ + H NIVK + + ++V EY G + L +E + + +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFRQIV 123
Query: 919 DALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYV 978
A+ Y H IV+RD+ ++N+LLD + ++DFG S + G+ Y
Sbjct: 124 SAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSPPYA 179
Query: 979 APELAYTMKVT-EKSDVYSFGVLALEAIKGKHPRD 1012
APEL K + DV+S GV+ + G P D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 809 DEEHCIG------TGGQGSVYRAELS----SGEIVAVKKFHSPLLSEMTCQQEFLNEVKS 858
DE+ IG T G+G+ + +L+ +G+ VAVK L+ + Q+ F EV+
Sbjct: 8 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRI 66
Query: 859 LTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVA 918
+ + H NIVK + + ++V EY G + L +E + + +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFRQIV 123
Query: 919 DALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYV 978
A+ Y H IV+RD+ ++N+LLD + ++DFG S + G+ Y
Sbjct: 124 SAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSPPYA 179
Query: 979 APELAYTMKVT-EKSDVYSFGVLALEAIKGKHPRD 1012
APEL K + DV+S GV+ + G P D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 64/279 (22%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 814 IGTGGQGSVYRA---ELSSGEI---VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
+G G G VY ++ GE VAVK + + + + EFLNE + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 82
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELG-------WTQRMNVIKGVADA 920
V+ G S + + +V E + G L L + E + + + +AD
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 921 LSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG--TIGYV 978
++YL+ F V+RD++++N ++ ++ + DFG+++ + + G + ++
Sbjct: 143 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM 199
Query: 979 APELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLP 1037
APE T SD++SFGV+ E + P +S+ ++ L ++D
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------EQVLKFVMDGGYL 251
Query: 1038 APSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
N +++ +M + C NP RPT ++ LLK
Sbjct: 252 DQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLK 287
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 73
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I + + G L + + +G +N +A +
Sbjct: 74 VDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 130
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG++K L + + G I ++A
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 240
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + + C + DSRP +++
Sbjct: 241 PPICT-----IDVYMIMVKCWMIDADSRPKFREL 269
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 805 TNDFDEEHCIG------TGGQGSVYRAELS----SGEIVAVKKFHSPLLSEMTCQQEFLN 854
T+ DE+ IG T G+G+ + +L+ +G VAVK L+ + Q+ F
Sbjct: 5 TSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF-R 63
Query: 855 EVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVI 914
EV+ + + H NIVK + + ++V EY G + L +E +
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKF 120
Query: 915 KGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT 974
+ + A+ Y H IV+RD+ ++N+LLD + ++DFG S + G+
Sbjct: 121 RQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTV-GNKLDTFCGS 176
Query: 975 IGYVAPELAYTMKVT-EKSDVYSFGVLALEAIKGKHPRD 1012
Y APEL K + DV+S GV+ + G P D
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + ++ VA+KK SP + CQ+ L E+K L RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 88
Query: 873 FC-----SHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +IV + +E ++ + S + + + + + L Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 142
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAY 984
+++RD+ N+LL+ + + DFG+++ PD + TE T Y APE+
Sbjct: 143 --ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 985 TMKVTEKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
K KS D++S G + E + GKH D ++ I
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 67/266 (25%), Positives = 109/266 (40%), Gaps = 21/266 (7%)
Query: 807 DFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI---- 862
DFD IG G V L + + K + E+ E ++ V++ +
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKV---VKKELVNDDEDIDWVQTEKHVFEQA 66
Query: 863 -RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
H +V + F V EY+ G L + E ++ AL
Sbjct: 67 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE---EHARFYSAEISLAL 123
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKS-LKPDSSNWTELAGTIGYVAP 980
+YLH I+YRD+ NVLLD E ++D+G+ K L+P + + GT Y+AP
Sbjct: 124 NYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIAP 179
Query: 981 ELAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDE-ILDPRLPAP 1039
E+ D ++ GVL E + G+ P D + S + N + L + IL+ ++ P
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP 239
Query: 1040 SCNIRDKLISIMEVAISCLDENPDSR 1065
R + V S L+++P R
Sbjct: 240 ----RSLSVKAASVLKSFLNKDPKER 261
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + ++ VA+KK SP + CQ+ L E+K L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 92
Query: 873 FC-----SHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +IV + +E ++ + S + + + + + L Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 146
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAY 984
+++RD+ N+LL+ + + DFG+++ PD + TE T Y APE+
Sbjct: 147 --ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 985 TMKVTEKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
K KS D++S G + E + GKH D ++ I
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 75
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I + + G L + + +G +N +A +
Sbjct: 76 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 132
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG++K L + + G I ++A
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 242
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + + C + DSRP +++
Sbjct: 243 PPICT-----IDVYMIMVKCWMIDADSRPKFREL 271
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 98
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I + + G L + + +G +N +A +
Sbjct: 99 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 155
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG++K L + + G I ++A
Sbjct: 156 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 212
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 213 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 265
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + + C + DSRP +++
Sbjct: 266 PPICT-----IDVYMIMVKCWMIDADSRPKFREL 294
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain With
4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 79
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I + + G L + + +G +N +A +
Sbjct: 80 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 136
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG++K L + + G I ++A
Sbjct: 137 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 193
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 194 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 246
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + + C + DSRP +++
Sbjct: 247 PPICT-----IDVYMIMVKCWMIDADSRPKFREL 275
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 76
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I + + G L + + +G +N +A +
Sbjct: 77 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 133
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG++K L + + G I ++A
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 243
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + + C + DSRP +++
Sbjct: 244 PPICT-----IDVYMIMVKCWMIDADSRPKFREL 272
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 80
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I + + G L + + +G +N +A +
Sbjct: 81 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 137
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG++K L + + G I ++A
Sbjct: 138 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 247
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + + C + DSRP +++
Sbjct: 248 PPICT-----IDVYMIMVKCWMIDADSRPKFREL 276
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 67
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I + + G L + + +G +N +A +
Sbjct: 68 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 124
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG++K L + + G I ++A
Sbjct: 125 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 181
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 182 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 234
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + + C + DSRP +++
Sbjct: 235 PPICT-----IDVYMIMVKCWMIDADSRPKFREL 263
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With Amp-
Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 73
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I + + G L + + +G +N +A +
Sbjct: 74 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 130
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG++K L + + G I ++A
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 240
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + + C + DSRP +++
Sbjct: 241 PPICT-----IDVYMIMVKCWMIDADSRPKFREL 269
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 76
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I + + G L + + +G +N +A +
Sbjct: 77 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 133
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG++K L + + G I ++A
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 243
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + + C + DSRP +++
Sbjct: 244 PPICT-----IDVYMIMVKCWMIDADSRPKFREL 272
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + ++ VA+KK SP + CQ+ L E+K L RH NI+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 90
Query: 873 FC-----SHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +IV + +E ++ + S + + + + + L Y+H+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 144
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAY 984
+++RD+ N+LL+ + + DFG+++ PD + TE T Y APE+
Sbjct: 145 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 985 TMKVTEKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
K KS D++S G + E + GKH D ++ I
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 19/215 (8%)
Query: 809 DEEHCIG------TGGQGSVYRAELS----SGEIVAVKKFHSPLLSEMTCQQEFLNEVKS 858
DE+ IG T G+G+ + +L+ +G VA+K L+ + Q+ F EV+
Sbjct: 6 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLF-REVRI 64
Query: 859 LTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVA 918
+ + H NIVK + + +++ EY G + L +E + + + +
Sbjct: 65 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKE---KEARSKFRQIV 121
Query: 919 DALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYV 978
A+ Y H IV+RD+ ++N+LLD + ++DFG S G+ Y
Sbjct: 122 SAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDTFCGSPPYA 177
Query: 979 APELAYTMKVT-EKSDVYSFGVLALEAIKGKHPRD 1012
APEL K + DV+S GV+ + G P D
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 67/266 (25%), Positives = 107/266 (40%), Gaps = 21/266 (7%)
Query: 807 DFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI---- 862
DFD IG G V L + + K + E+ E ++ V++ +
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKV---VKKELVNDDEDIDWVQTEKHVFEQA 62
Query: 863 -RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
H +V + F V EY+ G L + E ++ AL
Sbjct: 63 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE---EHARFYSAEISLAL 119
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKS-LKPDSSNWTELAGTIGYVAP 980
+YLH I+YRD+ NVLLD E ++D+G+ K L+P + + GT Y+AP
Sbjct: 120 NYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIAP 175
Query: 981 ELAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNL-DRTLDEILDPRLPAP 1039
E+ D ++ GVL E + G+ P D + S + N D IL+ ++ P
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP 235
Query: 1040 SCNIRDKLISIMEVAISCLDENPDSR 1065
R + V S L+++P R
Sbjct: 236 ----RSLSVKAASVLKSFLNKDPKER 257
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + ++ VA+KK SP + CQ+ L E+K L RH NI+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 93
Query: 873 FC-----SHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +IV + +E ++ + S + + + + + L Y+H+
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 147
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAY 984
+++RD+ N+LL+ + + DFG+++ PD + TE T Y APE+
Sbjct: 148 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 205
Query: 985 TMKVTEKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
K KS D++S G + E + GKH D ++ I
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 245
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + ++ VA+KK SP + CQ+ L E+K L RH NI+
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 94
Query: 873 FC-----SHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +IV + +E ++ + S + + + + + L Y+H+
Sbjct: 95 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 148
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAY 984
+++RD+ N+LL+ + + DFG+++ PD + TE T Y APE+
Sbjct: 149 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 206
Query: 985 TMKVTEKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
K KS D++S G + E + GKH D ++ I
Sbjct: 207 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 246
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + ++ VA+KK SP + CQ+ L E+K L RH NI+
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 85
Query: 873 FC-----SHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +IV + +E ++ + S + + + + + L Y+H+
Sbjct: 86 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 139
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAY 984
+++RD+ N+LL+ + + DFG+++ PD + TE T Y APE+
Sbjct: 140 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 197
Query: 985 TMKVTEKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
K KS D++S G + E + GKH D ++ I
Sbjct: 198 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 237
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + ++ VA+KK SP + CQ+ L E+K L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 92
Query: 873 FC-----SHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +IV + +E ++ + S + + + + + L Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 146
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAY 984
+++RD+ N+LL+ + + DFG+++ PD + TE T Y APE+
Sbjct: 147 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 985 TMKVTEKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
K KS D++S G + E + GKH D ++ I
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 63/289 (21%), Positives = 122/289 (42%), Gaps = 47/289 (16%)
Query: 807 DFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DF E IG+GG G V++A+ G+ +K+ ++ EVK+L ++ H
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN-------NEKAEREVKALAKLDHV 64
Query: 866 NIVKFYGFC-----------------SHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
NIV + G C S + FI E+ + G+L + E+L
Sbjct: 65 NIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK-RRGEKLDKV 122
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNW 968
+ + + + + Y+H+ ++ RD+ N+ L + + DFG+ SLK D
Sbjct: 123 LALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR- 178
Query: 969 TELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTL 1028
GT+ Y++PE + ++ D+Y+ G++ E + +C T+ +
Sbjct: 179 XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH----------VCDTAFETSKFF 228
Query: 1029 DEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLKI 1077
++ D + +I DK + + L + P+ RP ++ + L +
Sbjct: 229 TDLRDGIIS----DIFDKKEKTLLQKL--LSKKPEDRPNTSEILRTLTV 271
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain
Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain
Phosphorylated On Ser172
Length = 319
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 25/214 (11%)
Query: 814 IGTGGQGSVYRAE-LSSGEIVAVKKFHS-PLLSEMTCQQEFLNEVKSLTEIRHRNIVKFY 871
+G G +V+R +G++ A+K F++ L + Q + E + L ++ H+NIVK +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ---MREFEVLKKLNHKNIVKLF 73
Query: 872 GFCSHA--RHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
RH ++ E+ GSL +L ++A L ++ + V++ V +++L +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG- 132
Query: 930 PPIVYRDISSKNVLL----DLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT 985
IV+R+I N++ D + ++DFG ++ L+ D + L GT Y+ P++ Y
Sbjct: 133 --IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVXLYGTEEYLHPDM-YE 188
Query: 986 MKVTEKS---------DVYSFGVLALEAIKGKHP 1010
V K D++S GV A G P
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 19/215 (8%)
Query: 809 DEEHCIG------TGGQGSVYRAELS----SGEIVAVKKFHSPLLSEMTCQQEFLNEVKS 858
DE+ IG T G+G+ + +L+ +G+ VAVK L+ + Q+ F EV+
Sbjct: 8 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRI 66
Query: 859 LTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVA 918
+ + H NIVK + + ++V EY G + L +E + + +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFRQIV 123
Query: 919 DALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYV 978
A+ Y H IV+RD+ ++N+LLD + ++DFG S + G Y
Sbjct: 124 SAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDAFCGAPPYA 179
Query: 979 APELAYTMKVT-EKSDVYSFGVLALEAIKGKHPRD 1012
APEL K + DV+S GV+ + G P D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + ++ VA+KK SP + CQ+ L E+K L RH NI+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLAFRHENIIGIND 90
Query: 873 FC-----SHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +IV + +E ++ + S + + + + + L Y+H+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 144
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAY 984
+++RD+ N+LL+ + + DFG+++ PD + TE T Y APE+
Sbjct: 145 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 985 TMKVTEKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
K KS D++S G + E + GKH D ++ I
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin
Receptor Tyrosine Kinase
Length = 306
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 63/281 (22%), Positives = 125/281 (44%), Gaps = 36/281 (12%)
Query: 814 IGTGGQGSVYRA---ELSSGEI---VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
+G G G VY ++ GE VAVK + + + + EFLNE + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 82
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELG-------WTQRMNVIKGVADA 920
V+ G S + + +V E + G L L + E + + + +AD
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 921 LSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT----IG 976
++YL+ F V+R+++++N ++ ++ + DFG+++ + +++ G +
Sbjct: 143 MAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVR 197
Query: 977 YVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPR 1035
++APE T SD++SFGV+ E + P +S+ ++ L ++D
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------EQVLKFVMDGG 249
Query: 1036 LPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
N +++ +M + C NP+ RPT ++ LLK
Sbjct: 250 YLDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLK 287
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + ++ VA+KK SP + CQ+ L E+K L RH NI+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 86
Query: 873 FC-----SHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +IV + +E ++ + S + + + + + L Y+H+
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 140
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAY 984
+++RD+ N+LL+ + + DFG+++ PD + TE T Y APE+
Sbjct: 141 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 985 TMKVTEKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
K KS D++S G + E + GKH D ++ I
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 238
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 63/281 (22%), Positives = 125/281 (44%), Gaps = 36/281 (12%)
Query: 814 IGTGGQGSVYRA---ELSSGEI---VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
+G G G VY ++ GE VAVK + + + + EFLNE + ++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 83
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELG-------WTQRMNVIKGVADA 920
V+ G S + + +V E + G L L + E + + + +AD
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 921 LSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT----IG 976
++YL+ F V+R+++++N ++ ++ + DFG+++ + +++ G +
Sbjct: 144 MAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVR 198
Query: 977 YVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPR 1035
++APE T SD++SFGV+ E + P +S+ ++ L ++D
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------EQVLKFVMDGG 250
Query: 1036 LPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
N +++ +M + C NP+ RPT ++ LLK
Sbjct: 251 YLDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLK 288
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + ++ VA+KK SP + CQ+ L E+K L RH NI+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 86
Query: 873 FC-----SHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +IV + +E ++ + S + + + + + L Y+H+
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 140
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAY 984
+++RD+ N+LL+ + + DFG+++ PD + TE T Y APE+
Sbjct: 141 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 985 TMKVTEKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
K KS D++S G + E + GKH D ++ I
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 238
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 75/294 (25%), Positives = 131/294 (44%), Gaps = 40/294 (13%)
Query: 813 CIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
C+G G G V+R L GE VAVK F S E + +E E+ + +RH NI+ F
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAVKIFSSR--DEQSWFRE--TEIYNTVLLRHDNILGFIA 69
Query: 873 FCSHARHS----FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDC 928
+R+S +++ Y E GSL L T L + + A L++LH +
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA----LRLAVSAACGLAHLHVEI 125
Query: 929 F-----PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELA-----GTIGYV 978
F P I +RD S+NVL+ + ++D G++ + S++ ++ GT Y+
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPRVGTKRYM 184
Query: 979 APELAYTMKVTE------KSDVYSFGVLALE--------AIKGKHPRDFISSICSTSSNL 1024
APE+ T+ +D+++FG++ E I + F + + S
Sbjct: 185 APEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFE 244
Query: 1025 DRTLDEILDPRLPA-PSCNIRDKLIS-IMEVAISCLDENPDSRPTMQKVSQLLK 1076
D +D + P P+ D ++S + ++ C NP +R T ++ + L+
Sbjct: 245 DMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQ 298
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain
Of Csf-1r
Length = 324
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 133/305 (43%), Gaps = 56/305 (18%)
Query: 797 AYEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEV 856
A+ ++V AT G G + +V + VAVK S ++ ++ ++E+
Sbjct: 43 AFGKVVEAT-------AFGLGKEDAVLK--------VAVKMLKSTAHADE--KEALMSEL 85
Query: 857 KSLTEI-RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSA------------- 902
K ++ + +H NIV G C+H ++ EY G L L A
Sbjct: 86 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPE 145
Query: 903 -------EELGWTQRMNVIKGVADALSYLHN-DCFPPIVYRDISSKNVLLDLEYEAHVSD 954
L ++ VA +++L + +C ++RD++++NVLL + A + D
Sbjct: 146 GLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGD 201
Query: 955 FGISKSLKPDSSNWTELAGT--IGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPR 1011
FG+++ + DS+ + + ++APE + T +SDV+S+G+L E G +P
Sbjct: 202 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 261
Query: 1012 DFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
I + S L + ++ P AP + SIM+ +C P RPT Q++
Sbjct: 262 PGI-LVNSKFYKLVKDGYQMAQPAF-APK-----NIYSIMQ---ACWALEPTHRPTFQQI 311
Query: 1072 SQLLK 1076
L+
Sbjct: 312 CSFLQ 316
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 809 DEEHCIG------TGGQGSVYRAELS----SGEIVAVKKFHSPLLSEMTCQQEFLNEVKS 858
DE+ IG T G+G+ + +L+ +G VA+K L+ + Q+ F EV+
Sbjct: 9 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLF-REVRI 67
Query: 859 LTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVA 918
+ + H NIVK + + +++ EY G + L +E + + + +
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKE---KEARSKFRQIV 124
Query: 919 DALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYV 978
A+ Y H IV+RD+ ++N+LLD + ++DFG S G Y
Sbjct: 125 SAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDAFCGAPPYA 180
Query: 979 APELAYTMKVT-EKSDVYSFGVLALEAIKGKHPRD 1012
APEL K + DV+S GV+ + G P D
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 25/214 (11%)
Query: 814 IGTGGQGSVYRAE-LSSGEIVAVKKFHS-PLLSEMTCQQEFLNEVKSLTEIRHRNIVKFY 871
+G G +V+R +G++ A+K F++ L + Q + E + L ++ H+NIVK +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ---MREFEVLKKLNHKNIVKLF 73
Query: 872 GFCSHA--RHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
RH ++ E+ GSL +L ++A L ++ + V++ V +++L +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG- 132
Query: 930 PPIVYRDISSKNVLL----DLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT 985
IV+R+I N++ D + ++DFG ++ L+ D + L GT Y+ P++ Y
Sbjct: 133 --IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVSLYGTEEYLHPDM-YE 188
Query: 986 MKVTEKS---------DVYSFGVLALEAIKGKHP 1010
V K D++S GV A G P
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 859 LTEIRHRNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQR--MNVIK 915
L ++ H +VK Y F + + +++ ++L G L LS +E+ +T+ +
Sbjct: 84 LADVNHPFVVKLHYAFQTEGK-LYLILDFLRGGDLFTRLS-----KEVMFTEEDVKFYLA 137
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTI 975
+A L +LH+ I+YRD+ +N+LLD E ++DFG+SK GT+
Sbjct: 138 ELALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTV 194
Query: 976 GYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
Y+APE+ + +D +S+GVL E + G P
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 124/278 (44%), Gaps = 35/278 (12%)
Query: 806 NDFDEEHCIGTGGQGSVYRA-ELSSGE-------IVAVKKFHSPLLSEMTCQQEFLNEVK 857
+F + +G+G G+VY+ + GE I+ +++ SP +E L+E
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSP-----KANKEILDEAY 103
Query: 858 SLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGV 917
+ + + ++ + G C + I + + G L + + +G +N +
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQI 160
Query: 918 ADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--I 975
A ++YL + +V+RD++++NVL+ ++DFG++K L + + G I
Sbjct: 161 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 217
Query: 976 GYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDP 1034
++A E T +SDV+S+GV E + G P D I + SS L++
Sbjct: 218 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GE 270
Query: 1035 RLPAPS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
RLP P C I + + + C + DSRP +++
Sbjct: 271 RLPQPPICT-----IDVYMIMVKCWMIDADSRPKFREL 303
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 131/296 (44%), Gaps = 57/296 (19%)
Query: 811 EHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTE-IRHRNIVK 869
E +G G G+V G VAVK+ +L + C + E+K LTE H N+++
Sbjct: 20 EKILGYGSSGTVVFQGSFQGRPVAVKR----MLIDF-CDIALM-EIKLLTESDDHPNVIR 73
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMN---VIKGVADALSYLHN 926
+Y + R +I E + ++ S S E L + N +++ +A +++LH+
Sbjct: 74 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 927 DCFPPIVYRDISSKNVLL--------DLEYEAH-----VSDFGISKSLKPDS----SNWT 969
I++RD+ +N+L+ D + A +SDFG+ K L N
Sbjct: 134 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 190
Query: 970 ELAGTIGYVAPE-------LAYTMKVTEKSDVYSFGVLALEAI-KGKHPRDFISSICSTS 1021
+GT G+ APE L ++T D++S G + + KGKHP S
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP---FGDKYSRE 247
Query: 1022 SNLDR---TLDEIL---DPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
SN+ R +LDE+ D L A + + LIS M +D +P RPT KV
Sbjct: 248 SNIIRGIFSLDEMKCLHDRSLIAEATD----LISQM------IDHDPLKRPTAMKV 293
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + ++ VA+KK SP + CQ+ L E+K L RH NI+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLAFRHENIIGIND 90
Query: 873 FC-----SHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +IV + +E ++ + S + + + + + L Y+H+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 144
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAY 984
+++RD+ N+LL+ + + DFG+++ PD + TE T Y APE+
Sbjct: 145 --ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 985 TMKVTEKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
K KS D++S G + E + GKH D ++ I
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine
At 2a Resolution
Length = 345
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 26/215 (12%)
Query: 807 DFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLL---SEMTCQQEFLNEVKSLTEI 862
DF +G G G V+ AE + + A+K ++ ++ C ++ E
Sbjct: 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVEC---------TMVEK 68
Query: 863 RHRNIVKFYGFCSH-------ARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
R ++ + F +H + F V EYL G L + + S + ++
Sbjct: 69 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAA 125
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTI 975
+ L +LH+ IVYRD+ N+LLD + ++DFG+ K + GT
Sbjct: 126 EIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTP 182
Query: 976 GYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
Y+APE+ K D +SFGVL E + G+ P
Sbjct: 183 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor Whi-P180
Length = 484
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 12/194 (6%)
Query: 811 EHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVK 869
+ +G G G V + +G+ AVK + + T ++ L EV+ L ++ H NI K
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXK 90
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
Y F + ++V E G L S + +I+ V ++Y H +
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITYXHKN-- 145
Query: 930 PPIVYRDISSKNVLLDLEYEA---HVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTM 986
IV+RD+ +N+LL+ + + + DFG+S + S + GT Y+APE+ +
Sbjct: 146 -KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKXKDKIGTAYYIAPEVLHGT 203
Query: 987 KVTEKSDVYSFGVL 1000
EK DV+S GV+
Sbjct: 204 -YDEKCDVWSTGVI 216
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.5 bits (153), Expect = 7e-10, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 809 DEEHCIG------TGGQGSVYRAELS----SGEIVAVKKFHSPLLSEMTCQQEFLNEVKS 858
DE+ IG T G+G+ + +L+ +G+ VAV+ L+ + Q+ F EV+
Sbjct: 8 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF-REVRI 66
Query: 859 LTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVA 918
+ + H NIVK + + ++V EY G + L +E + + +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFRQIV 123
Query: 919 DALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYV 978
A+ Y H IV+RD+ ++N+LLD + ++DFG S + G+ Y
Sbjct: 124 SAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSPPYA 179
Query: 979 APELAYTMKVT-EKSDVYSFGVLALEAIKGKHPRD 1012
APEL K + DV+S GV+ + G P D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 109/267 (40%), Gaps = 21/267 (7%)
Query: 806 NDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI--- 862
DFD IG G V L + + K + E+ E ++ V++ +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKV---VKKELVNDDEDIDWVQTEKHVFEQ 76
Query: 863 --RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADA 920
H +V + F V EY+ G L + E ++ A
Sbjct: 77 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE---EHARFYSAEISLA 133
Query: 921 LSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKS-LKPDSSNWTELAGTIGYVA 979
L+YLH I+YRD+ NVLLD E ++D+G+ K L+P + + GT Y+A
Sbjct: 134 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIA 189
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDE-ILDPRLPA 1038
PE+ D ++ GVL E + G+ P D + S + N + L + IL+ ++
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 249
Query: 1039 PSCNIRDKLISIMEVAISCLDENPDSR 1065
P R + V S L+++P R
Sbjct: 250 P----RSMSVKAASVLKSFLNKDPKER 272
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + ++ VA+KK SP + CQ+ L E+K L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 92
Query: 873 FC-----SHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +IV + +E ++ S + + + + + L Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICY-----FLYQILRGLKYIHS- 146
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAY 984
+++RD+ N+LL+ + + DFG+++ PD + TE T Y APE+
Sbjct: 147 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 985 TMKVTEKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
K KS D++S G + E + GKH D ++ I
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
562
Length = 301
Score = 63.2 bits (152), Expect = 7e-10, Method: Composition-based stats.
Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 26/265 (9%)
Query: 814 IGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G GG Y ++ + E+ A K +L + +++ E+ + + ++V F+G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 873 FCSHARHSFIVYEYLEMGSLAMI--LSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
F ++V E SL + A + E + R I+GV YLHN+
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR-QTIQGV----QYLHNN--- 145
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTE 990
+++RD+ N+ L+ + + + DFG++ ++ D +L GT Y+APE+ +
Sbjct: 146 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSF 205
Query: 991 KSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISI 1050
+ D++S G + + GK P + C + + +E PR P + LI
Sbjct: 206 EVDIWSLGCILYTLLVGKPP---FETSCLKETYIRIKKNEYSVPRHINP---VASALIRR 259
Query: 1051 MEVAISCLDENPDSRPTMQKVSQLL 1075
M L +P RP+ V++LL
Sbjct: 260 M------LHADPTLRPS---VAELL 275
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain
From Human
Length = 314
Score = 63.2 bits (152), Expect = 7e-10, Method: Composition-based stats.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 32/210 (15%)
Query: 817 GGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSH 876
G G V++A+L + + VAVK F PL + + Q E E+ S ++H N+++F +
Sbjct: 26 GRFGCVWKAQLMN-DFVAVKIF--PLQDKQSWQSE--REIFSTPGMKHENLLQF--IAAE 78
Query: 877 ARHS------FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDC-- 928
R S +++ + + GSL L + W + +V + ++ LSYLH D
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYLKGNI----ITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 929 ------FPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS--SNWTELAGTIGYVAP 980
P I +RD SKNVLL + A ++DFG++ +P + GT Y+AP
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP 194
Query: 981 E-----LAYTMKVTEKSDVYSFGVLALEAI 1005
E + + + D+Y+ G++ E +
Sbjct: 195 EVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation
At Position 52
Length = 364
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + ++ VA++K SP + CQ+ L E+K L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 92
Query: 873 FC-----SHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +IV + +E ++ + S + + + + + L Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 146
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAY 984
+++RD+ N+LL+ + + DFG+++ PD + TE T Y APE+
Sbjct: 147 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 985 TMKVTEKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
K KS D++S G + E + GKH D ++ I
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
094
Length = 317
Score = 63.2 bits (152), Expect = 8e-10, Method: Composition-based stats.
Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 26/265 (9%)
Query: 814 IGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G GG Y ++ + E+ A K +L + +++ E+ + + ++V F+G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 873 FCSHARHSFIVYEYLEMGSLAMI--LSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
F ++V E SL + A + E + R I+GV YLHN+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR-QTIQGV----QYLHNN--- 161
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTE 990
+++RD+ N+ L+ + + + DFG++ ++ D +L GT Y+APE+ +
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSF 221
Query: 991 KSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISI 1050
+ D++S G + + GK P + C + + +E PR P + LI
Sbjct: 222 EVDIWSLGCILYTLLVGKPP---FETSCLKETYIRIKKNEYSVPRHINP---VASALIRR 275
Query: 1051 MEVAISCLDENPDSRPTMQKVSQLL 1075
M L +P RP+ V++LL
Sbjct: 276 M------LHADPTLRPS---VAELL 291
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 31/240 (12%)
Query: 786 FLSVLTFDRKIAYEEIVR---ATNDFDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSP 841
+L + F+R + ++ + R N F + +G GG G V ++ ++G++ A KK
Sbjct: 161 YLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKK 220
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ + + LNE + L ++ R +V + Y Y +L ++L+
Sbjct: 221 RIKKRKGEAMALNEKQILEKVNSRFVVS------------LAYAYETKDALCLVLTLMNG 268
Query: 902 AE---------ELGWTQRMNVIKG--VADALSYLHNDCFPPIVYRDISSKNVLLDLEYEA 950
+ + G+ + V + L LH + IVYRD+ +N+LLD
Sbjct: 269 GDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHI 325
Query: 951 HVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+SD G++ + P+ GT+GY+APE+ + T D ++ G L E I G+ P
Sbjct: 326 RISDLGLAVHV-PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 109/267 (40%), Gaps = 21/267 (7%)
Query: 806 NDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI--- 862
DFD IG G V L + + + + E+ E ++ V++ +
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRV---VKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 863 --RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADA 920
H +V + F V EY+ G L + E ++ A
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE---EHARFYSAEISLA 165
Query: 921 LSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKS-LKPDSSNWTELAGTIGYVA 979
L+YLH I+YRD+ NVLLD E ++D+G+ K L+P + T GT Y+A
Sbjct: 166 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST-FCGTPNYIA 221
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDE-ILDPRLPA 1038
PE+ D ++ GVL E + G+ P D + S + N + L + IL+ ++
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 281
Query: 1039 PSCNIRDKLISIMEVAISCLDENPDSR 1065
P R + V S L+++P R
Sbjct: 282 P----RSLSVKAASVLKSFLNKDPKER 304
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Amp
Length = 576
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 31/240 (12%)
Query: 786 FLSVLTFDRKIAYEEIVR---ATNDFDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSP 841
+L + F+R + ++ + R N F + +G GG G V ++ ++G++ A KK
Sbjct: 161 YLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKK 220
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ + + LNE + L ++ R +V + Y Y +L ++L+
Sbjct: 221 RIKKRKGEAMALNEKQILEKVNSRFVVS------------LAYAYETKDALCLVLTLMNG 268
Query: 902 AE---------ELGWTQRMNVIKG--VADALSYLHNDCFPPIVYRDISSKNVLLDLEYEA 950
+ + G+ + V + L LH + IVYRD+ +N+LLD
Sbjct: 269 GDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHI 325
Query: 951 HVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+SD G++ + P+ GT+GY+APE+ + T D ++ G L E I G+ P
Sbjct: 326 RISDLGLAVHV-PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 39/276 (14%)
Query: 813 CIGTGGQGSVYRAELSSGE----IVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIV 868
CIG G G V++ S E VA+K + + + +++FL E ++ + H +IV
Sbjct: 22 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKN--CTSDSVREKFLQEALTMRQFDHPHIV 79
Query: 869 KFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDC 928
K G + +I+ E +G L L + +L + ++ AL+YL +
Sbjct: 80 KLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLESKR 136
Query: 929 FPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVAPELAYTM 986
F V+RDI+++NVL+ + DFG+S+ ++ DS+ + G I ++APE
Sbjct: 137 F---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFR 192
Query: 987 KVTEKSDVYSFGVLALEAI-------KGKHPRDFISSICSTSSNLDRTLDEILDPRLPAP 1039
+ T SDV+ FGV E + +G D I I + RLP P
Sbjct: 193 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-------------RLPMP 239
Query: 1040 SCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
N L S+M C +P RP ++ L
Sbjct: 240 P-NCPPTLYSLM---TKCWAYDPSRRPRFTELKAQL 271
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 39/276 (14%)
Query: 813 CIGTGGQGSVYRAELSSGE----IVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIV 868
CIG G G V++ S E VA+K + + + +++FL E ++ + H +IV
Sbjct: 20 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKN--CTSDSVREKFLQEALTMRQFDHPHIV 77
Query: 869 KFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDC 928
K G + +I+ E +G L L + +L + ++ AL+YL +
Sbjct: 78 KLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLESKR 134
Query: 929 FPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVAPELAYTM 986
F V+RDI+++NVL+ + DFG+S+ ++ DS+ + G I ++APE
Sbjct: 135 F---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFR 190
Query: 987 KVTEKSDVYSFGVLALEAI-------KGKHPRDFISSICSTSSNLDRTLDEILDPRLPAP 1039
+ T SDV+ FGV E + +G D I I + RLP P
Sbjct: 191 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-------------RLPMP 237
Query: 1040 SCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
N L S+M C +P RP ++ L
Sbjct: 238 P-NCPPTLYSLM---TKCWAYDPSRRPRFTELKAQL 269
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 39/276 (14%)
Query: 813 CIGTGGQGSVYRAELSSGE----IVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIV 868
CIG G G V++ S E VA+K + + + +++FL E ++ + H +IV
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN--CTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 869 KFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDC 928
K G + +I+ E +G L L + +L + ++ AL+YL +
Sbjct: 75 KLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLESKR 131
Query: 929 FPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVAPELAYTM 986
F V+RDI+++NVL+ + DFG+S+ ++ DS+ + G I ++APE
Sbjct: 132 F---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFR 187
Query: 987 KVTEKSDVYSFGVLALEAI-------KGKHPRDFISSICSTSSNLDRTLDEILDPRLPAP 1039
+ T SDV+ FGV E + +G D I I + RLP P
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-------------RLPMP 234
Query: 1040 SCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
N L S+M C +P RP ++ L
Sbjct: 235 P-NCPPTLYSLM---TKCWAYDPSRRPRFTELKAQL 266
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 39/276 (14%)
Query: 813 CIGTGGQGSVYRAELSSGE----IVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIV 868
CIG G G V++ S E VA+K + + + +++FL E ++ + H +IV
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKN--CTSDSVREKFLQEALTMRQFDHPHIV 71
Query: 869 KFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDC 928
K G + +I+ E +G L L + +L + ++ AL+YL +
Sbjct: 72 KLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLESKR 128
Query: 929 FPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVAPELAYTM 986
F V+RDI+++NVL+ + DFG+S+ ++ DS+ + G I ++APE
Sbjct: 129 F---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFR 184
Query: 987 KVTEKSDVYSFGVLALEAI-------KGKHPRDFISSICSTSSNLDRTLDEILDPRLPAP 1039
+ T SDV+ FGV E + +G D I I + RLP P
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-------------RLPMP 231
Query: 1040 SCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
N L S+M C +P RP ++ L
Sbjct: 232 P-NCPPTLYSLM---TKCWAYDPSRRPRFTELKAQL 263
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 39/276 (14%)
Query: 813 CIGTGGQGSVYRAELSSGE----IVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIV 868
CIG G G V++ S E VA+K + + + +++FL E ++ + H +IV
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKN--CTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 869 KFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDC 928
K G + +I+ E +G L L + +L + ++ AL+YL +
Sbjct: 75 KLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLESKR 131
Query: 929 FPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVAPELAYTM 986
F V+RDI+++NVL+ + DFG+S+ ++ DS+ + G I ++APE
Sbjct: 132 F---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFR 187
Query: 987 KVTEKSDVYSFGVLALEAI-------KGKHPRDFISSICSTSSNLDRTLDEILDPRLPAP 1039
+ T SDV+ FGV E + +G D I I + RLP P
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-------------RLPMP 234
Query: 1040 SCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
N L S+M C +P RP ++ L
Sbjct: 235 P-NCPPTLYSLM---TKCWAYDPSRRPRFTELKAQL 266
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed
With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain Complexed
With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 39/276 (14%)
Query: 813 CIGTGGQGSVYRAELSSGE----IVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIV 868
CIG G G V++ S E VA+K + + + +++FL E ++ + H +IV
Sbjct: 19 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKN--CTSDSVREKFLQEALTMRQFDHPHIV 76
Query: 869 KFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDC 928
K G + +I+ E +G L L + +L + ++ AL+YL +
Sbjct: 77 KLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLESKR 133
Query: 929 FPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVAPELAYTM 986
F V+RDI+++NVL+ + DFG+S+ ++ DS+ + G I ++APE
Sbjct: 134 F---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFR 189
Query: 987 KVTEKSDVYSFGVLALEAI-------KGKHPRDFISSICSTSSNLDRTLDEILDPRLPAP 1039
+ T SDV+ FGV E + +G D I I + RLP P
Sbjct: 190 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-------------RLPMP 236
Query: 1040 SCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
N L S+M C +P RP ++ L
Sbjct: 237 P-NCPPTLYSLM---TKCWAYDPSRRPRFTELKAQL 268
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 8/201 (3%)
Query: 807 DFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
+F + IG G G VY+A +GE+VA+KK +E + E+ L E+ H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 62
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
NIVK ++V+E+L + ++A + L + + + + LS+ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLSFCH 120
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT 985
+ +++RD+ +N+L++ E ++DFG++++ +T T+ Y APE+
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 986 MKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMV 198
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 39/276 (14%)
Query: 813 CIGTGGQGSVYRAELSSGE----IVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIV 868
CIG G G V++ S E VA+K + + + +++FL E ++ + H +IV
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN--CTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 869 KFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDC 928
K G + +I+ E +G L L + +L + ++ AL+YL +
Sbjct: 75 KLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLA--SLILYAYQLSTALAYLESKR 131
Query: 929 FPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVAPELAYTM 986
F V+RDI+++NVL+ + DFG+S+ ++ DS+ + G I ++APE
Sbjct: 132 F---VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFR 187
Query: 987 KVTEKSDVYSFGVLALEAI-------KGKHPRDFISSICSTSSNLDRTLDEILDPRLPAP 1039
+ T SDV+ FGV E + +G D I I + RLP P
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-------------RLPMP 234
Query: 1040 SCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
N L S+M C +P RP ++ L
Sbjct: 235 P-NCPPTLYSLM---TKCWAYDPSRRPRFTELKAQL 266
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 814 IGTGGQGSVY--RAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFY 871
+G+G G V + +L+ E A+K ++ + L+EV L ++ H NI+K Y
Sbjct: 29 LGSGAYGEVLLCKDKLTGAE-RAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 872 GFCSHARHSFIVYEYLEMGSL--AMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
F R+ ++V E G L +IL S + ++K V +YLH
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-----IMKQVLSGTTYLHKH-- 140
Query: 930 PPIVYRDISSKNVLLDLEYE---AHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTM 986
IV+RD+ +N+LL+ + + DFG+S + E GT Y+APE+
Sbjct: 141 -NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-GGKMKERLGTAYYIAPEV-LRK 197
Query: 987 KVTEKSDVYSFGVLALEAIKGKHP 1010
K EK DV+S GV+ + G P
Sbjct: 198 KYDEKCDVWSCGVILYILLCGYPP 221
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 39/276 (14%)
Query: 813 CIGTGGQGSVYRAELSSGE----IVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIV 868
CIG G G V++ S E VA+K + + + +++FL E ++ + H +IV
Sbjct: 45 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKN--CTSDSVREKFLQEALTMRQFDHPHIV 102
Query: 869 KFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDC 928
K G + +I+ E +G L L + +L + ++ AL+YL +
Sbjct: 103 KLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLESKR 159
Query: 929 FPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVAPELAYTM 986
F V+RDI+++NVL+ + DFG+S+ ++ DS+ + G I ++APE
Sbjct: 160 F---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFR 215
Query: 987 KVTEKSDVYSFGVLALEAI-------KGKHPRDFISSICSTSSNLDRTLDEILDPRLPAP 1039
+ T SDV+ FGV E + +G D I I + RLP P
Sbjct: 216 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-------------RLPMP 262
Query: 1040 SCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
N L S+M C +P RP ++ L
Sbjct: 263 P-NCPPTLYSLM---TKCWAYDPSRRPRFTELKAQL 294
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 75
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I+ + + G L + + +G +N +A +
Sbjct: 76 VDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 132
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG +K L + + G I ++A
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 242
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + + C + DSRP +++
Sbjct: 243 PPICT-----IDVYMIMVKCWMIDADSRPKFREL 271
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 77
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I+ + + G L + + +G +N +A +
Sbjct: 78 VDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 134
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG +K L + + G I ++A
Sbjct: 135 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 192 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 244
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + + C + DSRP +++
Sbjct: 245 PPICT-----IDVYMIMVKCWMIDADSRPKFREL 273
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 809 DEEHCIG------TGGQGSVYRAELS----SGEIVAVKKFHSPLLSEMTCQQEFLNEVKS 858
DE+ IG T G+G+ + +L+ +G+ VAVK L+ + Q+ F EV+
Sbjct: 8 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRI 66
Query: 859 LTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVA 918
+ H NIVK + + ++V EY G + L +E + + +
Sbjct: 67 XKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKE---KEARAKFRQIV 123
Query: 919 DALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYV 978
A+ Y H IV+RD+ ++N+LLD + ++DFG S + G Y
Sbjct: 124 SAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFT-FGNKLDAFCGAPPYA 179
Query: 979 APELAYTMKVT-EKSDVYSFGVLALEAIKGKHPRD 1012
APEL K + DV+S GV+ + G P D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 814 IGTGGQGSVYRAEL----SSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVK 869
+ T G+GS + +L ++G+ VA+K + +L++ Q E+ L +RH +I+K
Sbjct: 13 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 72
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
Y +V EY I+ +E+ + + + A+ Y H
Sbjct: 73 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH-- 126
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPE-LAYTMKV 988
IV+RD+ +N+LLD ++DFG+S ++ D + G+ Y APE ++ +
Sbjct: 127 -KIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSCGSPNYAAPEVISGKLYA 184
Query: 989 TEKSDVYSFGVLALEAIKGKHPRD--FISSICSTSSNLDRTLDEILDP 1034
+ DV+S GV+ + + P D I + SN TL + L P
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSP 232
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 122/274 (44%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 80
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I + + G L + + +G +N +A +
Sbjct: 81 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 137
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG +K L + + G I ++A
Sbjct: 138 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 247
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + + C + DSRP +++
Sbjct: 248 PPICT-----IDVYMIMVKCWMIDADSRPKFREL 276
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 122/274 (44%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 73
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I + + G L + + +G +N +A +
Sbjct: 74 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 130
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG +K L + + G I ++A
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 240
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + + C + DSRP +++
Sbjct: 241 PPICT-----IDVYMIMVKCWMIDADSRPKFREL 269
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 814 IGTGGQGSVYRAEL----SSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVK 869
+ T G+GS + +L ++G+ VA+K + +L++ Q E+ L +RH +I+K
Sbjct: 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 77
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
Y +V EY I+ +E+ + + + A+ Y H
Sbjct: 78 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH-- 131
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPE-LAYTMKV 988
IV+RD+ +N+LLD ++DFG+S ++ D + G+ Y APE ++ +
Sbjct: 132 -KIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSCGSPNYAAPEVISGKLYA 189
Query: 989 TEKSDVYSFGVLALEAIKGKHPRD--FISSICSTSSNLDRTLDEILDP 1034
+ DV+S GV+ + + P D I + SN TL + L P
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSP 237
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 814 IGTGGQGSVYRAEL----SSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVK 869
+ T G+GS + +L ++G+ VA+K + +L++ Q E+ L +RH +I+K
Sbjct: 9 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 68
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
Y +V EY I+ +E+ + + + A+ Y H
Sbjct: 69 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH-- 122
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPE-LAYTMKV 988
IV+RD+ +N+LLD ++DFG+S ++ D + G+ Y APE ++ +
Sbjct: 123 -KIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSCGSPNYAAPEVISGKLYA 180
Query: 989 TEKSDVYSFGVLALEAIKGKHPRD--FISSICSTSSNLDRTLDEILDP 1034
+ DV+S GV+ + + P D I + SN TL + L P
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSP 228
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 120/277 (43%), Gaps = 39/277 (14%)
Query: 812 HCIGTGGQGSVYRAELSSGE----IVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
CIG G G V++ S E VA+K + + + +++FL E ++ + H +I
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN--CTSDSVREKFLQEALTMRQFDHPHI 453
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
VK G + +I+ E +G L L + +L + ++ AL+YL +
Sbjct: 454 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLA--SLILYAYQLSTALAYLESK 510
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVAPELAYT 985
F V+RDI+++NVL+ + DFG+S+ ++ DS+ + G I ++APE
Sbjct: 511 RF---VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 566
Query: 986 MKVTEKSDVYSFGVLALEAI-------KGKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
+ T SDV+ FGV E + +G D I I + RLP
Sbjct: 567 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-------------RLPM 613
Query: 1039 PSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
P N L S+M C +P RP ++ L
Sbjct: 614 PP-NCPPTLYSLM---TKCWAYDPSRRPRFTELKAQL 646
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 64/274 (23%), Positives = 123/274 (44%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + + +G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 80
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I+ + + G L + + +G +N +A +
Sbjct: 81 VDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 137
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG++K L + + G I ++A
Sbjct: 138 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 247
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + + C + DSRP +++
Sbjct: 248 PPICT-----IDVYMIMVKCWMIDADSRPKFREL 276
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 26/265 (9%)
Query: 814 IGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G GG Y ++ + E+ A K +L + +++ E+ + + ++V F+G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 873 FCSHARHSFIVYEYLEMGSLAMI--LSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
F ++V E SL + A + E + R I+GV YLHN+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR-QTIQGV----QYLHNN--- 161
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTE 990
+++RD+ N+ L+ + + + DFG++ ++ D L GT Y+APE+ +
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSF 221
Query: 991 KSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISI 1050
+ D++S G + + GK P + C + + +E PR P + LI
Sbjct: 222 EVDIWSLGCILYTLLVGKPP---FETSCLKETYIRIKKNEYSVPRHINP---VASALIRR 275
Query: 1051 MEVAISCLDENPDSRPTMQKVSQLL 1075
M L +P RP+ V++LL
Sbjct: 276 M------LHADPTLRPS---VAELL 291
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 26/265 (9%)
Query: 814 IGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G GG Y ++ + E+ A K +L + +++ E+ + + ++V F+G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 873 FCSHARHSFIVYEYLEMGSLAMI--LSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
F ++V E SL + A + E + R I+GV YLHN+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR-QTIQGV----QYLHNN--- 161
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTE 990
+++RD+ N+ L+ + + + DFG++ ++ D L GT Y+APE+ +
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSF 221
Query: 991 KSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISI 1050
+ D++S G + + GK P + C + + +E PR P + LI
Sbjct: 222 EVDIWSLGCILYTLLVGKPP---FETSCLKETYIRIKKNEYSVPRHINP---VASALIRR 275
Query: 1051 MEVAISCLDENPDSRPTMQKVSQLL 1075
M L +P RP+ V++LL
Sbjct: 276 M------LHADPTLRPS---VAELL 291
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 814 IGTGGQGSVYRAEL----SSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVK 869
+ T G+GS + +L ++G+ VA+K + +L++ Q E+ L +RH +I+K
Sbjct: 19 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 78
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
Y +V EY I+ +E+ + + + A+ Y H
Sbjct: 79 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH-- 132
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPE-LAYTMKV 988
IV+RD+ +N+LLD ++DFG+S ++ D + G+ Y APE ++ +
Sbjct: 133 -KIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSCGSPNYAAPEVISGKLYA 190
Query: 989 TEKSDVYSFGVLALEAIKGKHPRD 1012
+ DV+S GV+ + + P D
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of 6-cyclohexylmethoxy-8-isopropyl-9h-
Purin-2-ylamine And Monomeric Cdk2
Length = 299
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 8/201 (3%)
Query: 807 DFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
+F + IG G G VY+A +GE+VA+KK +E + E+ L E+ H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 62
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
NIVK ++V+E+L + ++A + L + + + + L++ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 120
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT 985
+ +++RD+ +N+L++ E ++DFG++++ +T T+ Y APE+
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 986 MKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMV 198
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) With
Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) With
Inhibitor
Length = 350
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 9/196 (4%)
Query: 818 GQGSVYRAEL----SSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
G+GS +A L G +K+ + +S ++E EV L ++H NIV++
Sbjct: 33 GEGSFGKAILVKSTEDGRQYVIKEINISRMSSKE-REESRREVAVLANMKHPNIVQYRES 91
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
+IV +Y E G L + NA Q ++ + AL ++H+ I+
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRI-NAQKGVLFQEDQILDWFVQICLALKHVHDR---KIL 147
Query: 934 YRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSD 993
+RDI S+N+ L + + DFGI++ L GT Y++PE+ KSD
Sbjct: 148 HRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSD 207
Query: 994 VYSFGVLALEAIKGKH 1009
+++ G + E KH
Sbjct: 208 IWALGCVLYELCTLKH 223
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 122/274 (44%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 83
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I + + G L + + +G +N +A +
Sbjct: 84 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 140
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG++K L + + G I ++A
Sbjct: 141 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 197
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 198 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 250
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + C + DSRP +++
Sbjct: 251 PPICT-----IDVYMIMRKCWMIDADSRPKFREL 279
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
Length = 327
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 122/274 (44%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 73
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I + + G L + + +G +N +A +
Sbjct: 74 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 130
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG++K L + + G I ++A
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 240
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + C + DSRP +++
Sbjct: 241 PPICT-----IDVYMIMRKCWMIDADSRPKFREL 269
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 122/274 (44%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 76
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I + + G L + + +G +N +A +
Sbjct: 77 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 133
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG++K L + + G I ++A
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 243
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + C + DSRP +++
Sbjct: 244 PPICT-----IDVYMIMRKCWMIDADSRPKFREL 272
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 8/201 (3%)
Query: 807 DFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
+F + IG G G VY+A +GE+VA+KK +E + E+ L E+ H
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 66
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
NIVK ++V+E+L + ++A + L + + + + L++ H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 124
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT 985
+ +++RD+ +N+L++ E ++DFG++++ +T T+ Y APE+
Sbjct: 125 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 181
Query: 986 MKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMV 202
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + ++ VA+KK SP + CQ+ L E+K L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 92
Query: 873 FC-----SHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +IV + +E ++ + S + + + + + L Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 146
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAY 984
+++RD+ N+LL+ + + DFG+++ PD + E T Y APE+
Sbjct: 147 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 204
Query: 985 TMKVTEKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
K KS D++S G + E + GKH D ++ I
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + ++ VA+KK SP + CQ+ L E+K L RH NI+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 93
Query: 873 FC-----SHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +IV + +E ++ + S + + + + + L Y+H+
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 147
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAY 984
+++RD+ N+LL+ + + DFG+++ PD + E T Y APE+
Sbjct: 148 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 205
Query: 985 TMKVTEKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
K KS D++S G + E + GKH D ++ I
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 245
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor Efp
With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor Efq
With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With 3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl Pyrimidine,
Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 8/201 (3%)
Query: 807 DFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
+F + IG G G VY+A +GE+VA+KK +E + E+ L E+ H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 62
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
NIVK ++V+E+L + ++A + L + + + + L++ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 120
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT 985
+ +++RD+ +N+L++ E ++DFG++++ +T T+ Y APE+
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 986 MKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMV 198
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 97/204 (47%), Gaps = 8/204 (3%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
+ +F + IG G G VY+A +GE+VA+KK +E + E+ L E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 60
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H NIVK ++V+E+L + ++A + L + + + + L+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 118
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
+ H+ +++RD+ +N+L++ E ++DFG++++ +T T+ Y APE+
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 175
Query: 983 AYTMKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With Cell
Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The Inhibitor
Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In Complex
With 4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In Complex
With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In Complex
With 4-[(6-amino-4-pyrimidinyl) Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2 (Cdk2)
In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-2-
Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2- Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A Pyrazolo[1,
5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A Pyrazolo[1,
5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar Study,
Crystal Structure In Complex With Cdk2, Selectivity, And
Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl Pyrimidine,
Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea (At9283),
A Multi-Targeted Kinase Inhibitor With Potent Aurora
Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At Its
Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At Its
Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole Type
Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole Type
Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole Type
Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of 2-Anilino-4-(Thiazol-5-Yl)
Pyrimidine Transcriptional Cdk Inhibitors As Anticancer
Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of 2-Anilino-4-(Thiazol-5-Yl)
Pyrimidine Transcriptional Cdk Inhibitors As Anticancer
Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 8/201 (3%)
Query: 807 DFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
+F + IG G G VY+A +GE+VA+KK +E + E+ L E+ H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 61
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
NIVK ++V+E+L + ++A + L + + + + L++ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 119
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT 985
+ +++RD+ +N+L++ E ++DFG++++ +T T+ Y APE+
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 986 MKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMV 197
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 97/204 (47%), Gaps = 8/204 (3%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
+ +F + IG G G VY+A +GE+VA+KK +E + E+ L E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 60
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H NIVK ++V+E+L M + ++A + L + + + + L+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 118
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
+ H+ +++RD+ +N+L++ E ++DFG++++ + T+ Y APE+
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 983 AYTMKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 8/201 (3%)
Query: 807 DFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
+F + IG G G VY+A +GE+VA+KK +E + E+ L E+ H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 61
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
NIVK ++V+E+L + ++A + L + + + + L++ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 119
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT 985
+ +++RD+ +N+L++ E ++DFG++++ +T T+ Y APE+
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 986 MKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMV 197
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 8/201 (3%)
Query: 807 DFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
+F + IG G G VY+A +GE+VA+KK +E + E+ L E+ H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 62
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
NIVK ++V+E+L + ++A + L + + + + L++ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 120
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT 985
+ +++RD+ +N+L++ E ++DFG++++ +T T+ Y APE+
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 986 MKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMV 198
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 64/274 (23%), Positives = 122/274 (44%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + + +G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 80
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I + + G L + + +G +N +A +
Sbjct: 81 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 137
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG++K L + + G I ++A
Sbjct: 138 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 247
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + + C + DSRP +++
Sbjct: 248 PPICT-----IDVYMIMVKCWMIDADSRPKFREL 276
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 64/274 (23%), Positives = 122/274 (44%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + + +G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 73
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I + + G L + + +G +N +A +
Sbjct: 74 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 130
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG++K L + + G I ++A
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 240
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + + C + DSRP +++
Sbjct: 241 PPICT-----IDVYMIMVKCWMIDADSRPKFREL 269
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With Atp
Length = 301
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 97/204 (47%), Gaps = 8/204 (3%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
+ +F + IG G G VY+A +GE+VA+KK +E + E+ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H NIVK ++V+E+L M + ++A + L + + + + L+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
+ H+ +++RD+ +N+L++ E ++DFG++++ + T+ Y APE+
Sbjct: 121 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 983 AYTMKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 9/164 (5%)
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQ 909
Q + + ++ + H +IV+ G C + +V +YL +GSL + A LG
Sbjct: 60 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGA--LGPQL 116
Query: 910 RMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN-- 967
+N +A + YL +V+R+++++NVLL + V+DFG++ L PD
Sbjct: 117 LLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL 173
Query: 968 WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHP 1010
++E I ++A E + K T +SDV+S+GV E + G P
Sbjct: 174 YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 92/215 (42%), Gaps = 16/215 (7%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + ++ VA+KK SP + CQ+ L E+K L RH NI+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 108
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
+ YL + L + L + + L Y+H+ +
Sbjct: 109 IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANV 165
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAYTMKVT 989
++RD+ N+LL+ + + DFG+++ PD + TE T Y APE+ K
Sbjct: 166 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 225
Query: 990 EKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
KS D++S G + E + GKH D ++ I
Sbjct: 226 TKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 63/302 (20%), Positives = 124/302 (41%), Gaps = 60/302 (19%)
Query: 807 DFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DF E IG+GG G V++A+ G+ +++ ++ EVK+L ++ H
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYN-------NEKAEREVKALAKLDHV 65
Query: 866 NIVKFYGFC------------------------------SHARHSFIVYEYLEMGSLAMI 895
NIV + G C S + FI E+ + G+L
Sbjct: 66 NIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQW 124
Query: 896 LSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDF 955
+ E+L + + + + + Y+H+ +++RD+ N+ L + + DF
Sbjct: 125 IEK-RRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDF 180
Query: 956 GISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFIS 1015
G+ SLK D T GT+ Y++PE + ++ D+Y+ G++ E +
Sbjct: 181 GLVTSLKNDGKR-TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH--------- 230
Query: 1016 SICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
+C T+ + ++ D + +I DK + + L + P+ RP ++ + L
Sbjct: 231 -VCDTAFETSKFFTDLRDGIIS----DIFDKKEKTLLQKL--LSKKPEDRPNTSEILRTL 283
Query: 1076 KI 1077
+
Sbjct: 284 TV 285
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 97/204 (47%), Gaps = 8/204 (3%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
+ +F + IG G G VY+A +GE+VA+KK +E + E+ L E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 61
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H NIVK ++V+E+L M + ++A + L + + + + L+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK--SYLFQLLQGLA 119
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
+ H+ +++RD+ +N+L++ E ++DFG++++ + T+ Y APE+
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 983 AYTMKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 8/201 (3%)
Query: 807 DFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
+F + IG G G VY+A +GE+VA+KK +E + E+ L E+ H
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 69
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
NIVK ++V+E+L + ++A + L + + + + L++ H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 127
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT 985
+ +++RD+ +N+L++ E ++DFG++++ +T T+ Y APE+
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 184
Query: 986 MKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMV 205
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
N+F+ +G G G V E ++G A+K ++ L E + L RH
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 865 RNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKG-VADALS 922
+ Y F +H R F++ EY G L LS E R + AL
Sbjct: 208 PFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSE----DRARFYGAEIVSALD 262
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
YLH++ +VYRD+ +N++LD + ++DFG+ K D + GT Y+APE+
Sbjct: 263 YLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV 320
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
D + GV+ E + G+ P
Sbjct: 321 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of 8-Anilino-1-Naphthalene
Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 8/201 (3%)
Query: 807 DFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
+F + IG G G VY+A +GE+VA+KK +E + E+ L E+ H
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 69
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
NIVK ++V+E+L + ++A + L + + + + L++ H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 127
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT 985
+ +++RD+ +N+L++ E ++DFG++++ +T T+ Y APE+
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 184
Query: 986 MKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 185 CKYYSTAVDIWSLGCIFAEMV 205
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor
Length = 446
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
N+F+ +G G G V E ++G A+K ++ L E + L RH
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 865 RNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKG-VADALS 922
+ Y F +H R F++ EY G L LS E R + AL
Sbjct: 211 PFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSE----DRARFYGAEIVSALD 265
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
YLH++ +VYRD+ +N++LD + ++DFG+ K D + GT Y+APE+
Sbjct: 266 YLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV 323
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
D + GV+ E + G+ P
Sbjct: 324 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 26/220 (11%)
Query: 814 IGTGGQGSVYRAELSSGEI-VAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + ++ VA+KK SP T Q L E+K L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPF-EHQTYXQRTLREIKILLRFRHENIIGIND 92
Query: 873 FC-----SHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ +IV + +E ++ + S + + + + + L Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS- 146
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAY 984
+++RD+ N+LL+ + + DFG+++ PD + TE T Y APE+
Sbjct: 147 --ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 985 TMKVTEKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
K KS D++S G + E + GKH D ++ I
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 120/277 (43%), Gaps = 39/277 (14%)
Query: 812 HCIGTGGQGSVYRAELSSGE----IVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
CIG G G V++ S E VA+K + + + +++FL E ++ + H +I
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN--CTSDSVREKFLQEALTMRQFDHPHI 453
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
VK G + +I+ E +G L L + +L + ++ AL+YL +
Sbjct: 454 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLA--SLILYAYQLSTALAYLESK 510
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVAPELAYT 985
F V+RDI+++NVL+ + DFG+S+ ++ DS+ + G I ++APE
Sbjct: 511 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 566
Query: 986 MKVTEKSDVYSFGVLALEAI-------KGKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
+ T SDV+ FGV E + +G D I I + RLP
Sbjct: 567 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-------------RLPM 613
Query: 1039 PSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
P N L S+M C +P RP ++ L
Sbjct: 614 PP-NCPPTLYSLM---TKCWAYDPSRRPRFTELKAQL 646
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With
Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex With
Amp-Pnp
Length = 344
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 9/164 (5%)
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQ 909
Q + + ++ + H +IV+ G C + +V +YL +GSL + A LG
Sbjct: 78 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGA--LGPQL 134
Query: 910 RMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN-- 967
+N +A + YL +V+R+++++NVLL + V+DFG++ L PD
Sbjct: 135 LLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL 191
Query: 968 WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHP 1010
++E I ++A E + K T +SDV+S+GV E + G P
Sbjct: 192 YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase
Domain Of Focal Adhesion Kinase With A Phosphorylated
Activation Loop
Length = 276
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 119/276 (43%), Gaps = 39/276 (14%)
Query: 813 CIGTGGQGSVYRAELSSGE----IVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIV 868
CIG G G V++ S E VA+K + + + +++FL E ++ + H +IV
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN--CTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 869 KFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDC 928
K G + +I+ E +G L L + +L + ++ AL+YL +
Sbjct: 75 KLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLA--SLILYAYQLSTALAYLESKR 131
Query: 929 FPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVAPELAYTM 986
F V+RDI+++NVL+ + DFG+S+ ++ DS+ G I ++APE
Sbjct: 132 F---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGKLPIKWMAPESINFR 187
Query: 987 KVTEKSDVYSFGVLALEAI-------KGKHPRDFISSICSTSSNLDRTLDEILDPRLPAP 1039
+ T SDV+ FGV E + +G D I I + RLP P
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-------------RLPMP 234
Query: 1040 SCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
N L S+M C +P RP ++ L
Sbjct: 235 P-NCPPTLYSLM---TKCWAYDPSRRPRFTELKAQL 266
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With Atp
Length = 302
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 97/204 (47%), Gaps = 8/204 (3%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
+ +F + IG G G VY+A +GE+VA+KK +E + E+ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H NIVK ++V+E+L M + ++A + L + + + + L+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
+ H+ +++RD+ +N+L++ E ++DFG++++ + T+ Y APE+
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 983 AYTMKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 76/301 (25%), Positives = 124/301 (41%), Gaps = 51/301 (16%)
Query: 808 FDEEHC--IGTGGQGSVYRAEL--------SSGEIVAVKKFHSPLLSEMTCQQEFLNEVK 857
F+E H I G+G+ EL ++G +VAVK+ S Q++F E++
Sbjct: 7 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH---SGPDQQRDFQREIQ 63
Query: 858 SLTEIRHRNIVKFYGFC-SHARHSF-IVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
L + IVK+ G R S +V EYL G L L + L ++ +
Sbjct: 64 ILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSS 121
Query: 916 GVADALSYL-HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTEL--- 971
+ + YL C V+RD++++N+L++ E ++DFG++K L D +
Sbjct: 122 QICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG 177
Query: 972 AGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEI 1031
I + APE + +SDV+SFGV+ E + CS S+ R +
Sbjct: 178 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT------YCDKSCSPSAEFLRMMGSE 231
Query: 1032 LD--------------PRLPA-PSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
D RLPA P+C + E+ C +P RP+ + L
Sbjct: 232 RDVPALSRLLELLEEGQRLPAPPACPAE-----VHELMKLCWAPSPQDRPSFSALGPQLD 286
Query: 1077 I 1077
+
Sbjct: 287 M 287
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
+++ F + +G G +VY+ ++G VA+K+ L SE + E+ + E+
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVK--LDSEEGTPSTAIREISLMKEL 60
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQR---MNVIK---- 915
+H NIV+ Y +V+E+++ L + +G T R +N++K
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDND-----LKKYMDSRTVGNTPRGLELNLVKYFQW 115
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTI 975
+ L++ H + I++RD+ +N+L++ + + DFG++++ + ++ T+
Sbjct: 116 QLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTL 172
Query: 976 GYVAPELAYTMKVTEKS-DVYSFGVLALEAIKGK 1008
Y AP++ + S D++S G + E I GK
Sbjct: 173 WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 22/221 (9%)
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCS--HARHSFIVYEYLEMGSLAMILSNATSAEELGW 907
++ E+ L ++ H N+VK + H ++V+E + G + + + +E+
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR 140
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN 967
++IKG+ YLH + I++RDI N+L+ + ++DFG+S K +
Sbjct: 141 FYFQDLIKGI----EYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL 193
Query: 968 WTELAGTIGYVAPE-LAYTMKV--TEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNL 1024
+ GT ++APE L+ T K+ + DV++ GV + G+ P +C S
Sbjct: 194 LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIK 253
Query: 1025 DRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSR 1065
+ L+ P P + +++D LI+ M LD+NP+SR
Sbjct: 254 SQALEF---PDQPDIAEDLKD-LITRM------LDKNPESR 284
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 6/132 (4%)
Query: 881 FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSK 940
+ V EY+ G L + +E Q + ++ L +LH I+YRD+
Sbjct: 96 YFVMEYVNGGDLMYHIQQVGKFKE---PQAVFYAAEISIGLFFLHKRG---IIYRDLKLD 149
Query: 941 NVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVL 1000
NV+LD E ++DFG+ K D E GT Y+APE+ + D +++GVL
Sbjct: 150 NVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVL 209
Query: 1001 ALEAIKGKHPRD 1012
E + G+ P D
Sbjct: 210 LYEMLAGQPPFD 221
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Tyrosine- Protein Kinase Mer In Complex With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Tyrosine- Protein Kinase Mer In Complex With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 65/269 (24%), Positives = 115/269 (42%), Gaps = 30/269 (11%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQ---QEFLNEVKSLTEIRHRNIVKF 870
+G G GSV L + ++K + + + Q +EFL+E + + H N+++
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 871 YGFCSHARHS-----FIVYEYLEMGSLAMILSNA---TSAEELGWTQRMNVIKGVADALS 922
G C ++ +++ G L L + T + + + + +A +
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL-KPDSSNWTELAGT-IGYVAP 980
YL N F ++RD++++N +L + V+DFG+SK + D +A + ++A
Sbjct: 162 YLSNRNF---LHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 981 ELAYTMKVTEKSDVYSFGVLALE-AIKGKHPRDFISSICSTSSNLDRTLDEILDP-RLPA 1038
E T KSDV++FGV E A +G P + + D +L RL
Sbjct: 219 ESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN--------HEMYDYLLHGHRLKQ 270
Query: 1039 PSCNIRDKLISIMEVAISCLDENPDSRPT 1067
P D L + E+ SC +P RPT
Sbjct: 271 P----EDCLDELYEIMYSCWRTDPLDRPT 295
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 9/207 (4%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DF +G G +V A EL++ A+K + + E ++ + H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
VK Y + Y + G L + S +E T + AL YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDE---TCTRFYTAEIVSALEYLH 149
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS--SNWTELAGTIGYVAPELA 983
I++RD+ +N+LL+ + ++DFG +K L P+S + GT YV+PEL
Sbjct: 150 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 206
Query: 984 YTMKVTEKSDVYSFGVLALEAIKGKHP 1010
++ SD+++ G + + + G P
Sbjct: 207 TEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860
Length = 467
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 90/194 (46%), Gaps = 18/194 (9%)
Query: 814 IGTGGQGSVY--RAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFY 871
+G+G G V + +L+ E A+K ++ + L+EV L ++ H NI+K Y
Sbjct: 12 LGSGAYGEVLLCKDKLTGAE-RAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 872 GFCSHARHSFIVYEYLEMGSL--AMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
F R+ ++V E G L +IL S ++K V +YLH
Sbjct: 71 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSE-----VDAAVIMKQVLSGTTYLHK--- 122
Query: 930 PPIVYRDISSKNVLLDLEYEA---HVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTM 986
IV+RD+ +N+LL+ + + DFG+S + E GT Y+APE+
Sbjct: 123 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-GGKMKERLGTAYYIAPEV-LRK 180
Query: 987 KVTEKSDVYSFGVL 1000
K EK DV+S GV+
Sbjct: 181 KYDEKCDVWSCGVI 194
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
Query: 851 EFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQR 910
+ L EV L + H NI+K Y F R+ ++V E + G L + + E+
Sbjct: 82 KLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV- 140
Query: 911 MNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLD-LEYEA--HVSDFGISKSLKPDSSN 967
+IK V ++YLH IV+RD+ +N+LL+ E +A + DFG+S ++ +
Sbjct: 141 --IIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLS-AVFENQKK 194
Query: 968 WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVL 1000
E GT Y+APE+ K EK DV+S GV+
Sbjct: 195 MKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVI 226
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 58/249 (23%), Positives = 108/249 (43%), Gaps = 35/249 (14%)
Query: 843 LSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----- 897
LS++ + E + + +H+NI+ G C+ +++ EY G+L L
Sbjct: 84 LSDLVSEMEMMKMIG-----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 898 --------NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYE 949
N E++ + ++ +A + YL + ++RD++++NVL+
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNV 195
Query: 950 AHVSDFGISKSLKPDS--SNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK- 1006
++DFG+++ + N T + ++APE + T +SDV+SFGVL E
Sbjct: 196 MKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
Query: 1007 GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRP 1066
G P I L + L E R+ P+ N ++L +M C P RP
Sbjct: 256 GGSPYPGIP-----VEELFKLLKE--GHRMDKPA-NCTNELYMMMR---DCWHAVPSQRP 304
Query: 1067 TMQKVSQLL 1075
T +++ + L
Sbjct: 305 TFKQLVEDL 313
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 814 IGTGGQGSVYRAELS------SGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTEIRH 864
+G G G VY ++S S VAVK L E+ +Q+ FL E +++ H
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 99
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNA----TSAEELGWTQRMNVIKGVADA 920
+NIV+ G + FI+ E + G L L + L ++V + +A
Sbjct: 100 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 159
Query: 921 LSYLHNDCFPPIVYRDISSKNVLLDLE---YEAHVSDFGISKSLKPDSSNWTELAGT--- 974
YL + F ++RDI+++N LL A + DFG+++ + +++ G
Sbjct: 160 CQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAML 214
Query: 975 -IGYVAPELAYTMKVTEKSDVYSFGVLALE 1003
+ ++ PE T K+D +SFGVL E
Sbjct: 215 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 244
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
Js30
Length = 316
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 11/208 (5%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DF +G G +V A EL++ A+K + + E ++ + H
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 866 NIVKFYGFCSHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
VK Y FC + Y + G L + S +E T + AL YL
Sbjct: 98 FFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSALEYL 153
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS--SNWTELAGTIGYVAPEL 982
H I++RD+ +N+LL+ + ++DFG +K L P+S + GT YV+PEL
Sbjct: 154 HGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 210
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ SD+++ G + + + G P
Sbjct: 211 LTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 830 GEIVAVKKFHSPLLS-EMTCQQEFLNEVKSLTEIRHRNIVKFY----GFCSHARHSFIVY 884
G+I+ F + +L+ E+ +E+ ++ I N V + S H F V
Sbjct: 35 GKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 885 EYLEMG---SLAMILSNATSAEELGWTQRMNVIKG---------VADALSYLHNDCFPPI 932
Y L LS A + E L + +++ + AL YLH I
Sbjct: 95 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GI 151
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS--SNWTELAGTIGYVAPELAYTMKVTE 990
++RD+ +N+LL+ + ++DFG +K L P+S + GT YV+PEL +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 991 KSDVYSFGVLALEAIKGKHP 1010
SD+++ G + + + G P
Sbjct: 212 SSDLWALGCIIYQLVAGLPP 231
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 30/210 (14%)
Query: 814 IGTGGQGSVYRAELS------SGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTEIRH 864
+G G G VY ++S S VAVK L E+ +Q+ FL E +++ H
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 133
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNA----TSAEELGWTQRMNVIKGVADA 920
+NIV+ G + FI+ E + G L L + L ++V + +A
Sbjct: 134 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 193
Query: 921 LSYLHNDCFPPIVYRDISSKNVLLDLE---YEAHVSDFGISKSLKPDSSNWTELAGT--- 974
YL + F ++RDI+++N LL A + DFG+++ + + + G
Sbjct: 194 CQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAGYYRKGGCAML 248
Query: 975 -IGYVAPELAYTMKVTEKSDVYSFGVLALE 1003
+ ++ PE T K+D +SFGVL E
Sbjct: 249 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 278
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 122/274 (44%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 75
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I+ + + G L + + +G +N +A +
Sbjct: 76 VDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 132
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG +K L + + G I ++A
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 242
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + C + DSRP +++
Sbjct: 243 PPICT-----IDVYMIMRKCWMIDADSRPKFREL 271
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase-
1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine
Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DF +G G +V A EL++ A+K + + E ++ + H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
VK Y + Y + G L + S +E T + AL YLH
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSALEYLH 150
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS--SNWTELAGTIGYVAPELA 983
I++RD+ +N+LL+ + ++DFG +K L P+S + GT YV+PEL
Sbjct: 151 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 207
Query: 984 YTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ SD+++ G + + + G P
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 96/201 (47%), Gaps = 8/201 (3%)
Query: 807 DFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
+F + IG G G VY+A +GE+VA+KK +E + E+ L E+ H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 61
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
NIVK ++V+E++ + ++A + L + + + + L++ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 119
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT 985
+ +++RD+ +N+L++ E ++DFG++++ +T T+ Y APE+
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 986 MKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMV 197
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 76/301 (25%), Positives = 124/301 (41%), Gaps = 51/301 (16%)
Query: 808 FDEEHC--IGTGGQGSVYRAEL--------SSGEIVAVKKFHSPLLSEMTCQQEFLNEVK 857
F+E H I G+G+ EL ++G +VAVK+ S Q++F E++
Sbjct: 8 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH---SGPDQQRDFQREIQ 64
Query: 858 SLTEIRHRNIVKFYGFC-SHARHSF-IVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
L + IVK+ G R S +V EYL G L L + L ++ +
Sbjct: 65 ILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSS 122
Query: 916 GVADALSYL-HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTEL--- 971
+ + YL C V+RD++++N+L++ E ++DFG++K L D +
Sbjct: 123 QICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG 178
Query: 972 AGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEI 1031
I + APE + +SDV+SFGV+ E + CS S+ R +
Sbjct: 179 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT------YCDKSCSPSAEFLRMMGCE 232
Query: 1032 LD--------------PRLPA-PSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
D RLPA P+C + E+ C +P RP+ + L
Sbjct: 233 RDVPALCRLLELLEEGQRLPAPPACPAE-----VHELMKLCWAPSPQDRPSFSALGPQLD 287
Query: 1077 I 1077
+
Sbjct: 288 M 288
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DF +G G +V A EL++ A+K + + E ++ + H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
VK Y + Y + G L + S +E T + AL YLH
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSALEYLH 146
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS--SNWTELAGTIGYVAPELA 983
I++RD+ +N+LL+ + ++DFG +K L P+S + GT YV+PEL
Sbjct: 147 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 203
Query: 984 YTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ SD+++ G + + + G P
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 76/301 (25%), Positives = 124/301 (41%), Gaps = 51/301 (16%)
Query: 808 FDEEHC--IGTGGQGSVYRAEL--------SSGEIVAVKKFHSPLLSEMTCQQEFLNEVK 857
F+E H I G+G+ EL ++G +VAVK+ S Q++F E++
Sbjct: 20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH---SGPDQQRDFQREIQ 76
Query: 858 SLTEIRHRNIVKFYGFC-SHARHSF-IVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
L + IVK+ G R S +V EYL G L L + L ++ +
Sbjct: 77 ILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSS 134
Query: 916 GVADALSYL-HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTEL--- 971
+ + YL C V+RD++++N+L++ E ++DFG++K L D +
Sbjct: 135 QICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG 190
Query: 972 AGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEI 1031
I + APE + +SDV+SFGV+ E + CS S+ R +
Sbjct: 191 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT------YCDKSCSPSAEFLRMMGCE 244
Query: 1032 LD--------------PRLPA-PSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
D RLPA P+C + E+ C +P RP+ + L
Sbjct: 245 RDVPALSRLLELLEEGQRLPAPPACPAE-----VHELMKLCWAPSPQDRPSFSALGPQLD 299
Query: 1077 I 1077
+
Sbjct: 300 M 300
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G G G VY +LS+ +A+K+ + Q E+ ++H+NIV++ G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPE---RDSRYSQPLHEEIALHKHLKHKNIVQYLG 72
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
S I E + GSL+ +L + + K + + L YLH++ I
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QI 129
Query: 933 VYRDISSKNVLLDLEYEA--HVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT--MKV 988
V+RDI NVL++ Y +SDFG SK L + GT+ Y+APE+
Sbjct: 130 VHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY 188
Query: 989 TEKSDVYSFGVLALEAIKGKHP 1010
+ +D++S G +E GK P
Sbjct: 189 GKAADIWSLGCTIIEMATGKPP 210
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Compound
Ps182 Bound To The Pif-Pocket
Length = 311
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DF +G G +V A EL++ A+K + + E ++ + H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
VK Y + Y + G L + S +E T + AL YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSALEYLH 149
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS--SNWTELAGTIGYVAPELA 983
I++RD+ +N+LL+ + ++DFG +K L P+S + GT YV+PEL
Sbjct: 150 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 984 YTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ SD+++ G + + + G P
Sbjct: 207 TEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ucn-01
Length = 310
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DF +G G +V A EL++ A+K + + E ++ + H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
VK Y + Y + G L + S +E T + AL YLH
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSALEYLH 147
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS--SNWTELAGTIGYVAPELA 983
I++RD+ +N+LL+ + ++DFG +K L P+S + GT YV+PEL
Sbjct: 148 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 984 YTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ SD+++ G + + + G P
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking
Partner
Length = 380
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 109 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 164
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 221
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 222 QTVDIWSVGCIMAELLTGR 240
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DF +G G +V A EL++ A+K + + E ++ + H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
VK Y + Y + G L + S +E T + AL YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSALEYLH 149
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS--SNWTELAGTIGYVAPELA 983
I++RD+ +N+LL+ + ++DFG +K L P+S + GT YV+PEL
Sbjct: 150 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 984 YTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ SD+++ G + + + G P
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DF +G G +V A EL++ A+K + + E ++ + H
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
VK Y + Y + G L + S +E T + AL YLH
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSALEYLH 131
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS--SNWTELAGTIGYVAPELA 983
I++RD+ +N+LL+ + ++DFG +K L P+S + GT YV+PEL
Sbjct: 132 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 188
Query: 984 YTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ SD+++ G + + + G P
Sbjct: 189 TEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-8
Length = 289
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DF +G G +V A EL++ A+K + + E ++ + H
Sbjct: 11 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 70
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
VK Y + Y + G L + S +E T + AL YLH
Sbjct: 71 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSALEYLH 127
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS--SNWTELAGTIGYVAPELA 983
I++RD+ +N+LL+ + ++DFG +K L P+S + GT YV+PEL
Sbjct: 128 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 184
Query: 984 YTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ SD+++ G + + + G P
Sbjct: 185 TEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide Complex
Length = 286
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DF +G G +V A EL++ A+K + + E ++ + H
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 67
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
VK Y + Y + G L + S +E T + AL YLH
Sbjct: 68 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSALEYLH 124
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS--SNWTELAGTIGYVAPELA 983
I++RD+ +N+LL+ + ++DFG +K L P+S + GT YV+PEL
Sbjct: 125 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 181
Query: 984 YTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ SD+++ G + + + G P
Sbjct: 182 TEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3
Length = 286
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DF +G G +V A EL++ A+K + + E ++ + H
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 69
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
VK Y + Y + G L + S +E T + AL YLH
Sbjct: 70 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSALEYLH 126
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS--SNWTELAGTIGYVAPELA 983
I++RD+ +N+LL+ + ++DFG +K L P+S + GT YV+PEL
Sbjct: 127 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 183
Query: 984 YTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ SD+++ G + + + G P
Sbjct: 184 TEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DF +G G +V A EL++ A+K + + E ++ + H
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
VK Y + Y + G L + S +E T + AL YLH
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSALEYLH 125
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS--SNWTELAGTIGYVAPELA 983
I++RD+ +N+LL+ + ++DFG +K L P+S + GT YV+PEL
Sbjct: 126 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 182
Query: 984 YTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ SD+++ G + + + G P
Sbjct: 183 TEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DF +G G +V A EL++ A+K + + E ++ + H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
VK Y + Y + G L + S +E T + AL YLH
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSALEYLH 147
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS--SNWTELAGTIGYVAPELA 983
I++RD+ +N+LL+ + ++DFG +K L P+S + GT YV+PEL
Sbjct: 148 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 984 YTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ SD+++ G + + + G P
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In
Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Compound
Ps210 Bound To The Pif-Pocket
Length = 311
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DF +G G +V A EL++ A+K + + E ++ + H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
VK Y + Y + G L + S +E T + AL YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSALEYLH 149
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS--SNWTELAGTIGYVAPELA 983
I++RD+ +N+LL+ + ++DFG +K L P+S + GT YV+PEL
Sbjct: 150 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 984 YTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ SD+++ G + + + G P
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DF +G G +V A EL++ A+K + + E ++ + H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
VK Y + Y + G L + S +E T + AL YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSALEYLH 149
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS--SNWTELAGTIGYVAPELA 983
I++RD+ +N+LL+ + ++DFG +K L P+S + GT YV+PEL
Sbjct: 150 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 984 YTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ SD+++ G + + + G P
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DF +G G +V A EL++ A+K + + E ++ + H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
VK Y + Y + G L + S +E T + AL YLH
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSALEYLH 147
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS--SNWTELAGTIGYVAPELA 983
I++RD+ +N+LL+ + ++DFG +K L P+S + GT YV+PEL
Sbjct: 148 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL 204
Query: 984 YTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ SD+++ G + + + G P
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DF +G G +V A EL++ A+K + + E ++ + H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
VK Y + Y + G L + S +E T + AL YLH
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSALEYLH 146
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS--SNWTELAGTIGYVAPELA 983
I++RD+ +N+LL+ + ++DFG +K L P+S + GT YV+PEL
Sbjct: 147 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 203
Query: 984 YTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ SD+++ G + + + G P
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 71/309 (22%), Positives = 134/309 (43%), Gaps = 48/309 (15%)
Query: 794 RKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAEL---SSGE---IVAVKKFHSPLLSEMT 847
++ +EI + F EE +G G VY+ L + GE VA+K +E
Sbjct: 16 KQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK--AEGP 71
Query: 848 CQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGW 907
++EF +E ++H N+V G + + +++ Y G L L + ++G
Sbjct: 72 LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGS 131
Query: 908 TQRMNVIKG-------------VADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSD 954
T +K +A + YL + +V++D++++NVL+ + +SD
Sbjct: 132 TDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISD 188
Query: 955 FGISKSLKPDSSNWTELAGT----IGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKH 1009
G+ + + ++++ +L G I ++APE K + SD++S+GV+ E G
Sbjct: 189 LGLFREVY--AADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQ 246
Query: 1010 PRDFISSICSTSSNLDRTLDEILDPR--LPAPSCNIRDKLISIMEVAISCLDENPDSRPT 1067
P C S ++ + E++ R LP P D + + I C +E P RP
Sbjct: 247 P------YCGYS---NQDVVEMIRNRQVLPCPD----DCPAWVYALMIECWNEFPSRRPR 293
Query: 1068 MQKVSQLLK 1076
+ + L+
Sbjct: 294 FKDIHSRLR 302
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DF +G G +V A EL++ A+K + + E ++ + H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
VK Y + Y + G L + S +E T + AL YLH
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSALEYLH 150
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS--SNWTELAGTIGYVAPELA 983
I++RD+ +N+LL+ + ++DFG +K L P+S + GT YV+PEL
Sbjct: 151 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 207
Query: 984 YTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ SD+++ G + + + G P
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DF +G G +V A EL++ A+K + + E ++ + H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
VK Y + Y + G L + S +E T + AL YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSALEYLH 149
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS--SNWTELAGTIGYVAPELA 983
I++RD+ +N+LL+ + ++DFG +K L P+S + GT YV+PEL
Sbjct: 150 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 984 YTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ SD+++ G + + + G P
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 121/274 (44%), Gaps = 29/274 (10%)
Query: 807 DFDEEHCIGTGGQGSVYRAE-LSSGEIV----AVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+F + +G+G G+VY+ + GE V A+K+ + +E L+E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMAS 75
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+ + ++ + G C + I + + G L + + +G +N +A +
Sbjct: 76 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGM 132
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVA 979
+YL + +V+RD++++NVL+ ++DFG +K L + + G I ++A
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 980 PELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
E T +SDV+S+GV E + G P D I + SS L++ RLP
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEK------GERLPQ 242
Query: 1039 PS-CNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P C I + + C + DSRP +++
Sbjct: 243 PPICT-----IDVYMIMRKCWMIDADSRPKFREL 271
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 71/304 (23%), Positives = 132/304 (43%), Gaps = 48/304 (15%)
Query: 799 EEIVRATNDFDEEHCIGTGGQGSVYRAEL---SSGE---IVAVKKFHSPLLSEMTCQQEF 852
+EI + F EE +G G VY+ L + GE VA+K +E ++EF
Sbjct: 4 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK--AEGPLREEF 59
Query: 853 LNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMN 912
+E ++H N+V G + + +++ Y G L L + ++G T
Sbjct: 60 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119
Query: 913 VIKG-------------VADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISK 959
+K +A + YL + +V++D++++NVL+ + +SD G+ +
Sbjct: 120 TVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFR 176
Query: 960 SLKPDSSNWTELAGT----IGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFI 1014
+ ++++ +L G I ++APE K + SD++S+GV+ E G P
Sbjct: 177 EVY--AADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP---- 230
Query: 1015 SSICSTSSNLDRTLDEILDPR--LPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVS 1072
C S ++ + E++ R LP P D + + I C +E P RP + +
Sbjct: 231 --YCGYS---NQDVVEMIRNRQVLPCPD----DCPAWVYALMIECWNEFPSRRPRFKDIH 281
Query: 1073 QLLK 1076
L+
Sbjct: 282 SRLR 285
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
+ +F + IG G G VY+A +GE+VA+KK +E + E+ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H NIVK ++V+E+L + ++A + L + + + + L+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
+ H+ +++RD+ +N+L++ E ++DFG++++ + T+ Y APE+
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 983 AYTMKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 107
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 108 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 163
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 220
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 221 QTVDIWSVGCIMAELLTGR 239
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 807 DFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
DF +G G +V A EL++ A+K + + E ++ + H
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
VK Y + Y + G L + S +E T + AL YLH
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSALEYLH 152
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS--SNWTELAGTIGYVAPELA 983
I++RD+ +N+LL+ + ++DFG +K L P+S + GT YV+PEL
Sbjct: 153 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 209
Query: 984 YTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ SD+++ G + + + G P
Sbjct: 210 TEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 132/292 (45%), Gaps = 48/292 (16%)
Query: 814 IGTGGQGSVYRA------ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI-RHRN 866
+G G G V A + + VAVK + +T ++ ++E+K L+ + H N
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS--AHLTEREALMSELKVLSYLGNHMN 88
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSL---------AMILSNATSA------EELGWTQRM 911
IV G C+ + ++ EY G L + I S + A L +
Sbjct: 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 912 NVIKGVADALSYLHN-DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTE 970
+ VA +++L + +C ++RD++++N+LL + DFG+++ +K DS+ +
Sbjct: 149 SFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 971 LAGT--IGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRT 1027
+ ++APE + T +SDV+S+G+ E G P + S +
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM----PVDSKFYKM 260
Query: 1028 LDE---ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
+ E +L P AP+ ++ IM+ +C D +P RPT +++ QL++
Sbjct: 261 IKEGFRMLSPE-HAPA-----EMYDIMK---TCWDADPLKRPTFKQIVQLIE 303
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 35/249 (14%)
Query: 843 LSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----- 897
LS++ + E + + +H+NI+ G C+ +++ EY G+L L
Sbjct: 84 LSDLVSEMEMMKMIG-----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 898 --------NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYE 949
N E++ + ++ +A + YL + ++RD++++NVL+
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNV 195
Query: 950 AHVSDFGISKSLKPDSSNWTELAG--TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK- 1006
++DFG+++ + G + ++APE + T +SDV+SFGVL E
Sbjct: 196 MKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
Query: 1007 GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRP 1066
G P I L + L E R+ P+ N ++L +M C P RP
Sbjct: 256 GGSPYPGIP-----VEELFKLLKE--GHRMDKPA-NCTNELYMMMR---DCWHAVPSQRP 304
Query: 1067 TMQKVSQLL 1075
T +++ + L
Sbjct: 305 TFKQLVEDL 313
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 35/249 (14%)
Query: 843 LSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----- 897
LS++ + E + + +H+NI+ G C+ +++ EY G+L L
Sbjct: 84 LSDLVSEMEMMKMIG-----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 898 --------NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYE 949
N E++ + ++ +A + YL + ++RD++++NVL+
Sbjct: 139 GMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNV 195
Query: 950 AHVSDFGISKSLKPDSSNWTELAG--TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK- 1006
++DFG+++ + G + ++APE + T +SDV+SFGVL E
Sbjct: 196 MKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
Query: 1007 GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRP 1066
G P I L + L E R+ P+ N ++L +M C P RP
Sbjct: 256 GGSPYPGIP-----VEELFKLLKE--GHRMDKPA-NCTNELYMMMR---DCWHAVPSQRP 304
Query: 1067 TMQKVSQLL 1075
T +++ + L
Sbjct: 305 TFKQLVEDL 313
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase
5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase
5
Length = 295
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 22/207 (10%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G G G VY +LS+ +A+K+ + Q E+ ++H+NIV++ G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPE---RDSRYSQPLHEEIALHKHLKHKNIVQYLG 86
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNA-----TSAEELGWTQRMNVIKGVADALSYLHND 927
S I E + GSL+ +L + + + +G+ K + + L YLH++
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF-----YTKQILEGLKYLHDN 141
Query: 928 CFPPIVYRDISSKNVLLDLEYEA--HVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT 985
IV+RDI NVL++ Y +SDFG SK L + GT+ Y+APE+
Sbjct: 142 ---QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDK 197
Query: 986 --MKVTEKSDVYSFGVLALEAIKGKHP 1010
+ +D++S G +E GK P
Sbjct: 198 GPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
+ +F + IG G G VY+A +GE+VA+KK +E + E+ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H NIVK ++V+E+L + ++A + L + + + + L+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
+ H+ +++RD+ +N+L++ E ++DFG++++ + T+ Y APE+
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 983 AYTMKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
+ +F + IG G G VY+A +GE+VA+KK +E + E+ L E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 61
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H NIVK ++V+E+L + ++A + L + + + + L+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 119
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
+ H+ +++RD+ +N+L++ E ++DFG++++ + T+ Y APE+
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 983 AYTMKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
+ +F + IG G G VY+A +GE+VA+KK +E + E+ L E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 59
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H NIVK ++V+E+L + ++A + L + + + + L+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
+ H+ +++RD+ +N+L++ E ++DFG++++ + T+ Y APE+
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 983 AYTMKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 95 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 150
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 207
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 208 QTVDIWSVGCIMAELLTGR 226
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
+ +F + IG G G VY+A +GE+VA+KK +E + E+ L E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 59
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H NIVK ++V+E+L + ++A + L + + + + L+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
+ H+ +++RD+ +N+L++ E ++DFG++++ + T+ Y APE+
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 983 AYTMKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
+ +F + IG G G VY+A +GE+VA+KK +E + E+ L E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 61
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H NIVK ++V+E+L + ++A + L + + + + L+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 119
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
+ H+ +++RD+ +N+L++ E ++DFG++++ + T+ Y APE+
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 983 AYTMKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 167/636 (26%), Positives = 255/636 (40%), Gaps = 69/636 (10%)
Query: 109 HLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTNQF 168
++ L+L NQ+ + + S+L LD+ N+ S P L MLK+L L N+
Sbjct: 36 NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNEL 95
Query: 169 SGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSEIGNLK 228
S + L LHL N + NL + L +N LS + L+
Sbjct: 96 SQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLE 155
Query: 229 SLSGLELGYNKLSGSMPLSLGNLPN--LATLDLHDNSLSGSIPLSF---GNLTNLDILNL 283
+L L L NK+ L N L L+L N + P F G L L + N+
Sbjct: 156 NLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNV 215
Query: 284 PHN-SLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNL--TKLTILYLSDNLL---- 336
SL+ + E+ N S+ L LS ++LS + ++ L T LT+L LS N L
Sbjct: 216 QLGPSLTEKLCLELAN-TSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 274
Query: 337 ---FGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGSIPSEIX 393
F +P L Y F+LE N + HSL L N+ L L + SI
Sbjct: 275 NDSFAWLP----QLEY-FFLEY--NNIQHLFSHSLHGLFNVRYLNLKRSFTKQSI----- 322
Query: 394 XXXXXXXXXXXXXXXXXXIPYSFGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSY 453
+SF L + L++ N + G + L+ L L LS
Sbjct: 323 ----------SLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLS- 371
Query: 454 NQLQGPIPDLRNLTR----------LARVRLDRNHLTGNISESFGIHSNLSYINLSHKKF 503
LR LT L + L +N ++ S++F +L ++L +
Sbjct: 372 ----NSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEI 427
Query: 504 YGEIS-FDWGKFPNLGTLDVSANNITGILPPEIGDSPQLKVLDLSSNHI--VGEIPSELG 560
E++ +W N+ + +S N + P L+ L L + V PS
Sbjct: 428 GQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQ 487
Query: 561 KLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLS----NSIPGS----LGNLVK 612
LR+L L L+ N + L L +LE LDL N L+ ++ PG L L
Sbjct: 488 PLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSH 547
Query: 613 LYYLNLSNNQFSGEIPIKLEK-FIHLSDLDLSHNFLGEEIPSQVCSMQ-SLEKLNLAHNN 670
L+ LNL +N F EIP+++ K L +DL N L +P+ V + Q SL+ LNL N
Sbjct: 548 LHILNLESNGF-DEIPVEVFKDLFELKIIDLGLNNLN-TLPASVFNNQVSLKSLNLQKNL 605
Query: 671 LSGFIPRCF-KEMHGLVYIDISYNKLHGPIPNSAAF 705
++ + F L +D+ +N + A F
Sbjct: 606 ITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWF 641
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 139/552 (25%), Positives = 210/552 (38%), Gaps = 60/552 (10%)
Query: 204 TNLAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNS 263
TN+ ++ L +N L + L+ L++G+N +S P LP L L+L N
Sbjct: 35 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE 94
Query: 264 LSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNL 323
LS +F TNL L+L NS+ + K+L L LS N LS + + L
Sbjct: 95 LSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQL 154
Query: 324 TKLTILYLSDNLL--FGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFT 381
L L LS+N + S +I L LEL N++ P + L L+L
Sbjct: 155 ENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNN 214
Query: 382 NLLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPYSFGNL-----TNMIVLSIYSNALSGAI 436
L S+ ++ S TN+ +L + N L+
Sbjct: 215 VQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 274
Query: 437 PKEYGNLVKLTLLVLSYNQLQGPIPDLRNLTRLARVRLDRNHLTGNISESFGIHSNLSYI 496
+ L +L L YN +Q +L L VR N+ SF S I
Sbjct: 275 NDSFAWLPQLEYFFLEYNNIQHLFS--HSLHGLFNVRY------LNLKRSFTKQS----I 322
Query: 497 NLSHKKFYGEISFDWGKFPNLGTLDVSANNITGILPPEIGDSPQLKVLDLSSNH-----I 551
+L+ + SF W K L L++ N+I GI LK L LS++ +
Sbjct: 323 SLASLPKIDDFSFQWLKC--LEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTL 380
Query: 552 VGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGS----L 607
E L L L L +N+ S L LE LDL N + + G L
Sbjct: 381 TNETFVSLAH-SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGL 439
Query: 608 GNLVKLY-----YLNLSNNQFS------------------GEIPIKLEKFIHLSDLDLSH 644
N+ ++Y YL L+ N F+ P + +L+ LDLS+
Sbjct: 440 ENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSN 499
Query: 645 NFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCFKEMH--GLVYIDISYNKLHGPIPNS 702
N + + ++ LE L+L HNNL+ R +K + G +Y + LH S
Sbjct: 500 NNIANINDDMLEGLEKLEILDLQHNNLA----RLWKHANPGGPIYFLKGLSHLHILNLES 555
Query: 703 AAFKHAPMEALQ 714
F P+E +
Sbjct: 556 NGFDEIPVEVFK 567
Score = 38.5 bits (88), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 125/300 (41%), Gaps = 33/300 (11%)
Query: 99 LHDFSFSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSML 158
+ DFSF L +L++ N I GI + LKYL L SNSF+
Sbjct: 330 IDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSL-SNSFT------------- 375
Query: 159 KILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSG 218
S + + H S L L+L +N +S + L +L ++ L N +
Sbjct: 376 -----SLRTLTNETFVSLAH-SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQ 429
Query: 219 SIP-SEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSG--SIPLSFGNL 275
+ E L+++ + L YNK S +P+L L L +L S P F L
Sbjct: 430 ELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPL 489
Query: 276 TNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLS--------GSIPSSLGNLTKLT 327
NL IL+L +N+++ + L+ L L L N L+ G L L+ L
Sbjct: 490 RNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLH 549
Query: 328 ILYLSDNLLFGSIPCEI-GNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSG 386
IL L N F IP E+ +L L ++LG N L+ N +L +L L NL++
Sbjct: 550 ILNLESN-GFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITS 608
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
+ +F + IG G G VY+A +GE+VA+KK +E + E+ L E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 60
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H NIVK ++V+E+L + ++A + L + + + + L+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 118
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
+ H+ +++RD+ +N+L++ E ++DFG++++ + T+ Y APE+
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 983 AYTMKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A Gamma-
Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A Gamma-
Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With A
Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With A
Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN Complex
With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN Complex
With The Inhibitor N-&-N1
Length = 299
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
+ +F + IG G G VY+A +GE+VA+KK +E + E+ L E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 59
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H NIVK ++V+E+L + ++A + L + + + + L+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
+ H+ +++RD+ +N+L++ E ++DFG++++ + T+ Y APE+
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 983 AYTMKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 167/636 (26%), Positives = 255/636 (40%), Gaps = 69/636 (10%)
Query: 109 HLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTNQF 168
++ L+L NQ+ + + S+L LD+ N+ S P L MLK+L L N+
Sbjct: 31 NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNEL 90
Query: 169 SGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSEIGNLK 228
S + L LHL N + NL + L +N LS + L+
Sbjct: 91 SQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLE 150
Query: 229 SLSGLELGYNKLSGSMPLSLGNLPN--LATLDLHDNSLSGSIPLSF---GNLTNLDILNL 283
+L L L NK+ L N L L+L N + P F G L L + N+
Sbjct: 151 NLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNV 210
Query: 284 PHN-SLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNL--TKLTILYLSDNLL---- 336
SL+ + E+ N S+ L LS ++LS + ++ L T LT+L LS N L
Sbjct: 211 QLGPSLTEKLCLELAN-TSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 269
Query: 337 ---FGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGSIPSEIX 393
F +P L Y F+LE N + HSL L N+ L L + SI
Sbjct: 270 NDSFAWLP----QLEY-FFLEY--NNIQHLFSHSLHGLFNVRYLNLKRSFTKQSI----- 317
Query: 394 XXXXXXXXXXXXXXXXXXIPYSFGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSY 453
+SF L + L++ N + G + L+ L L LS
Sbjct: 318 ----------SLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLS- 366
Query: 454 NQLQGPIPDLRNLTR----------LARVRLDRNHLTGNISESFGIHSNLSYINLSHKKF 503
LR LT L + L +N ++ S++F +L ++L +
Sbjct: 367 ----NSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEI 422
Query: 504 YGEIS-FDWGKFPNLGTLDVSANNITGILPPEIGDSPQLKVLDLSSNHI--VGEIPSELG 560
E++ +W N+ + +S N + P L+ L L + V PS
Sbjct: 423 GQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQ 482
Query: 561 KLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLS----NSIPGS----LGNLVK 612
LR+L L L+ N + L L +LE LDL N L+ ++ PG L L
Sbjct: 483 PLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSH 542
Query: 613 LYYLNLSNNQFSGEIPIKLEK-FIHLSDLDLSHNFLGEEIPSQVCSMQ-SLEKLNLAHNN 670
L+ LNL +N F EIP+++ K L +DL N L +P+ V + Q SL+ LNL N
Sbjct: 543 LHILNLESNGF-DEIPVEVFKDLFELKIIDLGLNNLN-TLPASVFNNQVSLKSLNLQKNL 600
Query: 671 LSGFIPRCF-KEMHGLVYIDISYNKLHGPIPNSAAF 705
++ + F L +D+ +N + A F
Sbjct: 601 ITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWF 636
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 139/552 (25%), Positives = 210/552 (38%), Gaps = 60/552 (10%)
Query: 204 TNLAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNS 263
TN+ ++ L +N L + L+ L++G+N +S P LP L L+L N
Sbjct: 30 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE 89
Query: 264 LSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNL 323
LS +F TNL L+L NS+ + K+L L LS N LS + + L
Sbjct: 90 LSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQL 149
Query: 324 TKLTILYLSDNLL--FGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFT 381
L L LS+N + S +I L LEL N++ P + L L+L
Sbjct: 150 ENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNN 209
Query: 382 NLLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPYSFGNL-----TNMIVLSIYSNALSGAI 436
L S+ ++ S TN+ +L + N L+
Sbjct: 210 VQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 269
Query: 437 PKEYGNLVKLTLLVLSYNQLQGPIPDLRNLTRLARVRLDRNHLTGNISESFGIHSNLSYI 496
+ L +L L YN +Q +L L VR N+ SF S I
Sbjct: 270 NDSFAWLPQLEYFFLEYNNIQHLFS--HSLHGLFNVRY------LNLKRSFTKQS----I 317
Query: 497 NLSHKKFYGEISFDWGKFPNLGTLDVSANNITGILPPEIGDSPQLKVLDLSSNH-----I 551
+L+ + SF W K L L++ N+I GI LK L LS++ +
Sbjct: 318 SLASLPKIDDFSFQWLKC--LEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTL 375
Query: 552 VGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGS----L 607
E L L L L +N+ S L LE LDL N + + G L
Sbjct: 376 TNETFVSLAH-SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGL 434
Query: 608 GNLVKLY-----YLNLSNNQFS------------------GEIPIKLEKFIHLSDLDLSH 644
N+ ++Y YL L+ N F+ P + +L+ LDLS+
Sbjct: 435 ENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSN 494
Query: 645 NFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCFKEMH--GLVYIDISYNKLHGPIPNS 702
N + + ++ LE L+L HNNL+ R +K + G +Y + LH S
Sbjct: 495 NNIANINDDMLEGLEKLEILDLQHNNLA----RLWKHANPGGPIYFLKGLSHLHILNLES 550
Query: 703 AAFKHAPMEALQ 714
F P+E +
Sbjct: 551 NGFDEIPVEVFK 562
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 125/300 (41%), Gaps = 33/300 (11%)
Query: 99 LHDFSFSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSML 158
+ DFSF L +L++ N I GI + LKYL L SNSF+
Sbjct: 325 IDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSL-SNSFT------------- 370
Query: 159 KILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSG 218
S + + H S L L+L +N +S + L +L ++ L N +
Sbjct: 371 -----SLRTLTNETFVSLAH-SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQ 424
Query: 219 SIP-SEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSG--SIPLSFGNL 275
+ E L+++ + L YNK S +P+L L L +L S P F L
Sbjct: 425 ELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPL 484
Query: 276 TNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLS--------GSIPSSLGNLTKLT 327
NL IL+L +N+++ + L+ L L L N L+ G L L+ L
Sbjct: 485 RNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLH 544
Query: 328 ILYLSDNLLFGSIPCEI-GNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSG 386
IL L N F IP E+ +L L ++LG N L+ N +L +L L NL++
Sbjct: 545 ILNLESN-GFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITS 603
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The
Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The
Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
+ +F + IG G G VY+A +GE+VA+KK +E + E+ L E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 59
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H NIVK ++V+E+L + ++A + L + + + + L+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
+ H+ +++RD+ +N+L++ E ++DFG++++ + T+ Y APE+
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 983 AYTMKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap) In
Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site Phosphorylation:
Cdk2 Y15p T160p In Complex With Cyclin A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site Phosphorylation:
Cdk2 Y15p T160p In Complex With Cyclin A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium Ion
Length = 298
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 95/201 (47%), Gaps = 8/201 (3%)
Query: 807 DFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
+F + IG G G VY+A +GE+VA+KK +E + E+ L E+ H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 61
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
NIVK ++V+E+L + ++A + L + + + + L++ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 119
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT 985
+ +++RD+ +N+L++ E ++DFG++++ + T+ Y APE+
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 176
Query: 986 MKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMV 197
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
+ +F + IG G G VY+A +GE+VA+KK +E + E+ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H NIVK ++V+E+L + ++A + L + + + + L+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
+ H+ +++RD+ +N+L++ E ++DFG++++ + T+ Y APE+
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 983 AYTMKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS
Length = 296
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 95/201 (47%), Gaps = 8/201 (3%)
Query: 807 DFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
+F + IG G G VY+A +GE+VA+KK +E + E+ L E+ H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 61
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
NIVK ++V+E+L + ++A + L + + + + L++ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 119
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT 985
+ +++RD+ +N+L++ E ++DFG++++ + T+ Y APE+
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 176
Query: 986 MKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMV 197
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 95/201 (47%), Gaps = 8/201 (3%)
Query: 807 DFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
+F + IG G G VY+A +GE+VA+KK +E + E+ L E+ H
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 63
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
NIVK ++V+E+L + ++A + L + + + + L++ H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 121
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT 985
+ +++RD+ +N+L++ E ++DFG++++ + T+ Y APE+
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 986 MKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMV 199
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking
Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking
Site On Its Activator Mkk3b
Length = 360
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 201
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 98
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 99 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 154
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 155 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 211
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 212 QTVDIWSVGCIMAELLTGR 230
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 59.7 bits (143), Expect = 1e-08, Method: Composition-based stats.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 12/222 (5%)
Query: 791 TFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQ 849
TF R+ + I + +G+G GSV A + +G VAVKK P S + +
Sbjct: 3 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 62
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGW 907
+ + E++ L ++H N++ + AR S + YL + L+N ++L
Sbjct: 63 RTY-RELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 120
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN 967
+I + L Y+H+ I++RD+ N+ ++ + E + DFG+++ + +
Sbjct: 121 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 177
Query: 968 WTELAGTIGYVAPELAYT-MKVTEKSDVYSFGVLALEAIKGK 1008
+ T Y APE+ M + D++S G + E + G+
Sbjct: 178 YV---ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT Peptide
From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT Peptide
From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 59.7 bits (143), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
+ +F + IG G G VY+A +GE+VA+KK +E + E+ L E+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 63
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H NIVK ++V+E+L + ++A + L + + + + L+
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 121
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
+ H+ +++RD+ +N+L++ E ++DFG++++ + T+ Y APE+
Sbjct: 122 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 178
Query: 983 AYTMKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMV 202
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 95/201 (47%), Gaps = 8/201 (3%)
Query: 807 DFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
+F + IG G G VY+A +GE+VA+ K +E + E+ L E+ H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETE-GVPSTAIREISLLKELNHP 62
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
NIVK ++V+E+L + ++A + L + + + + L++ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 120
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT 985
+ +++RD+ +N+L++ E ++DFG++++ +T T+ Y APE+
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 986 MKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMV 198
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 95/201 (47%), Gaps = 8/201 (3%)
Query: 807 DFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHR 865
+F + IG G G VY+A +GE+VA+ K +E + E+ L E+ H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETE-GVPSTAIREISLLKELNHP 61
Query: 866 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLH 925
NIVK ++V+E+L + ++A + L + + + + L++ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCH 119
Query: 926 NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT 985
+ +++RD+ +N+L++ E ++DFG++++ +T T+ Y APE+
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 986 MKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMV 197
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With Atp
Length = 299
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
+ +F + IG G G VY+A +GE+VA+KK +E + E+ L E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 60
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H NIVK ++V+E+L + ++A + L + + + + L+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 118
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
+ H+ +++RD+ +N+L++ E ++DFG++++ + T+ Y APE+
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 983 AYTMKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAELSSGEIV-AVKKFHSPLLSEMTCQQEFLNEVKSLTE-IR 863
+DF IG G G V A + E+ AVK + + ++ ++E L + ++
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 864 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKG-VADALS 922
H +V + A + V +Y+ G L L E R +A AL
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQR----ERCFLEPRARFYAAEIASALG 153
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
YLH+ IVYRD+ +N+LLD + ++DFG+ K +S + GT Y+APE+
Sbjct: 154 YLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEV 210
Query: 983 AYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ D + G + E + G P
Sbjct: 211 LHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 82/188 (43%), Gaps = 4/188 (2%)
Query: 124 IPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTNQFSGRIPPQIGHLSYLK 183
IPS I ++K LDL SN S L+ L++LYL+ N+ L L+
Sbjct: 31 IPSNIPADTK--KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLE 88
Query: 184 ALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYNKLSGS 243
L + +N L L NLA + L N L P +L L+ L LGYN+L S
Sbjct: 89 TLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-S 147
Query: 244 MPLSL-GNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSL 302
+P + L +L L L++N L +F LT L L L +N L +L+ L
Sbjct: 148 LPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKL 207
Query: 303 YGLGLSFN 310
L L N
Sbjct: 208 KMLQLQEN 215
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 4/178 (2%)
Query: 183 KALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSEI-GNLKSLSGLELGYNKLS 241
K L L N LS + LT L ++YL +N L ++P+ I LK+L L + NKL
Sbjct: 40 KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQ 98
Query: 242 GSMPLSL-GNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLK 300
++P+ + L NLA L L N L P F +LT L L+L +N L L
Sbjct: 99 -ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157
Query: 301 SLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNLLFGSIPCEIGNLRYLFYLELGDN 358
SL L L N+L + LT+L L L +N L +L L L+L +N
Sbjct: 158 SLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 67/162 (41%), Gaps = 5/162 (3%)
Query: 353 LELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGSIPSEIXXXXXXXXXXXXXXXXXXXI 412
L+L NKLS + LT L LYL N L ++P+ I +
Sbjct: 42 LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQAL 100
Query: 413 PYS-FGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQG-PIPDLRNLTRLA 470
P F L N+ L + N L P+ + +L KLT L L YN+LQ P LT L
Sbjct: 101 PIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLK 160
Query: 471 RVRLDRNHLTGNISESFGIHSNLSYINLSHK--KFYGEISFD 510
+RL N L +F + L + L + K E +FD
Sbjct: 161 ELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFD 202
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 85/208 (40%), Gaps = 8/208 (3%)
Query: 516 NLGTLDVSANNITGILPPEIGDSPQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQF 575
N ++D S+ +T I P I K LDL SN + +L L L LN N+
Sbjct: 17 NKNSVDCSSKKLTAI-PSNI--PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKL 73
Query: 576 SGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFI 635
L LE L ++ N+L G LV L L L NQ P +
Sbjct: 74 QTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLT 133
Query: 636 HLSDLDLSHNFLGEEIPSQVCS-MQSLEKLNLAHNNLSGFIPRCFKEMHGLVYIDISYNK 694
L+ L L +N L + +P V + SL++L L +N L F ++ L + + N+
Sbjct: 134 KLTYLSLGYNEL-QSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQ 192
Query: 695 LHGPIPNSA--AFKHAPMEALQGNKGLC 720
L +P A + + M LQ N C
Sbjct: 193 LKR-VPEGAFDSLEKLKMLQLQENPWDC 219
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 4/157 (2%)
Query: 415 SFGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQG-PIPDLRNLTRLARVR 473
+F LT + +L + N L + L L L ++ N+LQ PI L LA +R
Sbjct: 56 AFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELR 115
Query: 474 LDRNHLTGNISESFGIHSNLSYINLSHKKFYGEISFDWGKFPNLGTLDVSANNITGILPP 533
LDRN L F + L+Y++L + + + K +L L + N + +
Sbjct: 116 LDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEG 175
Query: 534 EIGDSPQLKVLDLSSNHIVGEIPSELGKLRSLIKLTL 570
+LK L L +N + +P G SL KL +
Sbjct: 176 AFDKLTELKTLKLDNNQL-KRVPE--GAFDSLEKLKM 209
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 73/169 (43%), Gaps = 6/169 (3%)
Query: 219 SIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLS-FGNLTN 277
+IPS I L+L NKLS + L L L L+DN L ++P F L N
Sbjct: 30 AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKN 86
Query: 278 LDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNLLF 337
L+ L + N L L +L L L N+L P +LTKLT L L N L
Sbjct: 87 LETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNEL- 145
Query: 338 GSIPCEI-GNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLS 385
S+P + L L L L +N+L + LT L TL L N L
Sbjct: 146 QSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK 194
Score = 37.7 bits (86), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 2/112 (1%)
Query: 104 FSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYL 163
F +LA L L NQ+ + P + +KL YL L N L+ LK L L
Sbjct: 105 FDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRL 164
Query: 164 STNQFSGRIPP-QIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNN 214
NQ R+P L+ LK L L N L + +L L ++ L N
Sbjct: 165 YNNQLK-RVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 81/217 (37%), Gaps = 32/217 (14%)
Query: 72 CAWFGIHCNHAGKVNSINLTSAGLIGTLHDFSFSSFPHLAYLDLRVNQIFGIIPSQIANN 131
C G C+ NS++ +S L + + LDL+ N++ +
Sbjct: 5 CKKDGGVCSCNNNKNSVDCSSKKLTAIPSNIPADT----KKLDLQSNKLSSLPSKAFHRL 60
Query: 132 SKLKYLDLSSNSFSGTIPPQI-GNLSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFEN 190
+KL+ L L+ N T+P I L L+ L+++ N+ L L L L N
Sbjct: 61 TKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRN 119
Query: 191 GLSGSIPP------------SLG-------------NLTNLAIMYLYNNSLSGSIPSEIG 225
L S+PP SLG LT+L + LYNN L
Sbjct: 120 QLK-SLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFD 178
Query: 226 NLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDN 262
L L L+L N+L + +L L L L +N
Sbjct: 179 KLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 2/155 (1%)
Query: 471 RVRLDRNHLTGNISESFGIHSNLSYINLSHKKFYGEISFDWGKFPNLGTLDVSANNITGI 530
++ L N L+ S++F + L + L+ K + + + NL TL V+ N +
Sbjct: 41 KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQA- 99
Query: 531 LPPEIGDS-PQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQL 589
LP + D L L L N + P L L L+L N+ L L
Sbjct: 100 LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSL 159
Query: 590 EHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFS 624
+ L L +N+L G+ L +L L L NNQ
Sbjct: 160 KELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK 194
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
+ +F + IG G G VY+A +GE+VA+KK +E + E+ L E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 61
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H NIVK ++V+E+L + ++A + L + + + + L+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 119
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
+ H+ +++RD+ +N+L++ E ++DFG++++ + T+ Y APE+
Sbjct: 120 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 983 AYTMKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 32/232 (13%)
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQ 909
+ F ++++ H+++V YG C + +V E+++ GSL L + + W
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW-- 114
Query: 910 RMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEA--------HVSDFGISKSL 961
++ V K +A A+ +L + +++ ++ +KN+LL E + +SD GIS ++
Sbjct: 115 KLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
Query: 962 KPDSSNWTELAGTIGYVAPELAYTMK-VTEKSDVYSFGVLALEAIK-GKHPRDFISSICS 1019
P L I +V PE K + +D +SFG E G P + S
Sbjct: 172 LPKDI----LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK 227
Query: 1020 TSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
DR +LPAP K + + +C+D PD RP+ + +
Sbjct: 228 LQFYEDRH-------QLPAP------KAAELANLINNCMDYEPDHRPSFRAI 266
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 91/175 (52%), Gaps = 14/175 (8%)
Query: 109 HLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTNQF 168
+L L+L+ NQI + P + N +K+ L+LS N I L +K L L++ Q
Sbjct: 70 NLIGLELKDNQITDLTP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQI 125
Query: 169 SGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSEIGNLK 228
+ P + LS L+ L+L N ++ P L LTNL + + NN ++ P + NL
Sbjct: 126 TDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNNQVNDLTP--LANLS 179
Query: 229 SLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILNL 283
L+ L NK+S PL+ +LPNL + L DN +S PL+ NL+NL I+ L
Sbjct: 180 KLTTLRADDNKISDISPLA--SLPNLIEVHLKDNQISDVSPLA--NLSNLFIVTL 230
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 77/182 (42%), Gaps = 35/182 (19%)
Query: 299 LKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNLLFGSIPCEIGNLRYLFYLELGDN 358
L +L GL L N+++ P L NLTK+T L LS N L I L+ + L+L
Sbjct: 68 LNNLIGLELKDNQITDLTP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTST 123
Query: 359 KLSGSIPHSLGNLTNLATLYLFTNLLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPYSFGN 418
+++ P L L+NL LYL N ++ P
Sbjct: 124 QITDVTP--LAGLSNLQVLYLDLNQITNISP--------------------------LAG 155
Query: 419 LTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQGPIPDLRNLTRLARVRLDRNH 478
LTN+ LSI +N ++ P NL KLT L N++ P L +L L V L N
Sbjct: 156 LTNLQYLSIGNNQVNDLTP--LANLSKLTTLRADDNKISDISP-LASLPNLIEVHLKDNQ 212
Query: 479 LT 480
++
Sbjct: 213 IS 214
Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 516 NLGTLDVSANNITGILPPEIGDSPQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQF 575
NL L++ N IT + P + + ++ L+LS N + S + L+S+ L L Q
Sbjct: 70 NLIGLELKDNQITDLTP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQI 125
Query: 576 SGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFI 635
+ P S +Q+ +LDL N+++N P L L L YL++ NNQ + P L
Sbjct: 126 TDVTPLAGLSNLQVLYLDL--NQITNISP--LAGLTNLQYLSIGNNQVNDLTP--LANLS 179
Query: 636 HLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIP 676
L+ L N + + P + S+ +L +++L N +S P
Sbjct: 180 KLTTLRADDNKISDISP--LASLPNLIEVHLKDNQISDVSP 218
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 18/225 (8%)
Query: 791 TFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQ 849
TF R+ + I + +G+G GSV A + +G VAVKK P S + +
Sbjct: 3 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 62
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGW 907
+ + E++ L ++H N++ + AR S + YL + L+N ++L
Sbjct: 63 RTY-RELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 120
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN 967
+I + L Y+H+ I++RD+ N+ ++ + E + DFG+++
Sbjct: 121 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----- 172
Query: 968 WTELAGTIG---YVAPELAYT-MKVTEKSDVYSFGVLALEAIKGK 1008
E+AG + Y APE+ M + D++S G + E + G+
Sbjct: 173 -DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In
With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In
With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 13/164 (7%)
Query: 854 NEVKSLTEIR----HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQ 909
N K +T ++ H NIVK + H+F+V E L G L + T+
Sbjct: 51 NTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL---FERIKKKKHFSETE 107
Query: 910 RMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLE---YEAHVSDFGISKSLKPDSS 966
+++ + A+S++H+ +V+RD+ +N+L E E + DFG ++ PD+
Sbjct: 108 ASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ 164
Query: 967 NWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
T+ Y APEL E D++S GV+ + G+ P
Sbjct: 165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 94 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 149
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 150 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 206
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 207 QTVDIWSVGCIMAELLTGR 225
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In
Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIG---YVAPELAYT-M 986
I++RD+ N+ ++ + E + DFG+++ E+AG + Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMAGFVATRWYRAPEIMLNWM 198
Query: 987 KVTEKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIG---YVAPELAYT-M 986
I++RD+ N+ ++ + E + DFG+++ E+AG + Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMAGFVATRWYRAPEIMLNWM 198
Query: 987 KVTEKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 167/635 (26%), Positives = 254/635 (40%), Gaps = 69/635 (10%)
Query: 110 LAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTNQFS 169
+ L+L NQ+ + + S+L LD+ N+ S P L MLK+L L N+ S
Sbjct: 27 ITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS 86
Query: 170 GRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSEIGNLKS 229
+ L LHL N + NL + L +N LS + L++
Sbjct: 87 QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLEN 146
Query: 230 LSGLELGYNKLSGSMPLSLGNLPN--LATLDLHDNSLSGSIPLSF---GNLTNLDILNLP 284
L L L NK+ L N L L+L N + P F G L L + N+
Sbjct: 147 LQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQ 206
Query: 285 HN-SLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNL--TKLTILYLSDNLL----- 336
SL+ + E+ N S+ L LS ++LS + ++ L T LT+L LS N L
Sbjct: 207 LGPSLTEKLCLELAN-TSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGN 265
Query: 337 --FGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGSIPSEIXX 394
F +P L Y F+LE N + HSL L N+ L L + SI
Sbjct: 266 DSFAWLP----QLEY-FFLEY--NNIQHLFSHSLHGLFNVRYLNLKRSFTKQSI------ 312
Query: 395 XXXXXXXXXXXXXXXXXIPYSFGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYN 454
+SF L + L++ N + G + L+ L L LS
Sbjct: 313 ---------SLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLS-- 361
Query: 455 QLQGPIPDLRNLTR----------LARVRLDRNHLTGNISESFGIHSNLSYINLSHKKFY 504
LR LT L + L +N ++ S++F +L ++L +
Sbjct: 362 ---NSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIG 418
Query: 505 GEIS-FDWGKFPNLGTLDVSANNITGILPPEIGDSPQLKVLDLSSNHI--VGEIPSELGK 561
E++ +W N+ + +S N + P L+ L L + V PS
Sbjct: 419 QELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQP 478
Query: 562 LRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLS----NSIPGS----LGNLVKL 613
LR+L L L+ N + L L +LE LDL N L+ ++ PG L L L
Sbjct: 479 LRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHL 538
Query: 614 YYLNLSNNQFSGEIPIKLEK-FIHLSDLDLSHNFLGEEIPSQVCSMQ-SLEKLNLAHNNL 671
+ LNL +N F EIP+++ K L +DL N L +P+ V + Q SL+ LNL N +
Sbjct: 539 HILNLESNGF-DEIPVEVFKDLFELKIIDLGLNNLN-TLPASVFNNQVSLKSLNLQKNLI 596
Query: 672 SGFIPRCF-KEMHGLVYIDISYNKLHGPIPNSAAF 705
+ + F L +D+ +N + A F
Sbjct: 597 TSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWF 631
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 139/552 (25%), Positives = 210/552 (38%), Gaps = 60/552 (10%)
Query: 204 TNLAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNS 263
TN+ ++ L +N L + L+ L++G+N +S P LP L L+L N
Sbjct: 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE 84
Query: 264 LSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNL 323
LS +F TNL L+L NS+ + K+L L LS N LS + + L
Sbjct: 85 LSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQL 144
Query: 324 TKLTILYLSDNLL--FGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFT 381
L L LS+N + S +I L LEL N++ P + L L+L
Sbjct: 145 ENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNN 204
Query: 382 NLLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPYSFGNL-----TNMIVLSIYSNALSGAI 436
L S+ ++ S TN+ +L + N L+
Sbjct: 205 VQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264
Query: 437 PKEYGNLVKLTLLVLSYNQLQGPIPDLRNLTRLARVRLDRNHLTGNISESFGIHSNLSYI 496
+ L +L L YN +Q +L L VR N+ SF S I
Sbjct: 265 NDSFAWLPQLEYFFLEYNNIQHLFS--HSLHGLFNVRY------LNLKRSFTKQS----I 312
Query: 497 NLSHKKFYGEISFDWGKFPNLGTLDVSANNITGILPPEIGDSPQLKVLDLSSNH-----I 551
+L+ + SF W K L L++ N+I GI LK L LS++ +
Sbjct: 313 SLASLPKIDDFSFQWLKC--LEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTL 370
Query: 552 VGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGS----L 607
E L L L L +N+ S L LE LDL N + + G L
Sbjct: 371 TNETFVSLAH-SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGL 429
Query: 608 GNLVKLY-----YLNLSNNQFS------------------GEIPIKLEKFIHLSDLDLSH 644
N+ ++Y YL L+ N F+ P + +L+ LDLS+
Sbjct: 430 ENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSN 489
Query: 645 NFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCFKEMH--GLVYIDISYNKLHGPIPNS 702
N + + ++ LE L+L HNNL+ R +K + G +Y + LH S
Sbjct: 490 NNIANINDDMLEGLEKLEILDLQHNNLA----RLWKHANPGGPIYFLKGLSHLHILNLES 545
Query: 703 AAFKHAPMEALQ 714
F P+E +
Sbjct: 546 NGFDEIPVEVFK 557
Score = 38.5 bits (88), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 125/300 (41%), Gaps = 33/300 (11%)
Query: 99 LHDFSFSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSML 158
+ DFSF L +L++ N I GI + LKYL L SNSF+
Sbjct: 320 IDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSL-SNSFT------------- 365
Query: 159 KILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSG 218
S + + H S L L+L +N +S + L +L ++ L N +
Sbjct: 366 -----SLRTLTNETFVSLAH-SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQ 419
Query: 219 SIP-SEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSG--SIPLSFGNL 275
+ E L+++ + L YNK S +P+L L L +L S P F L
Sbjct: 420 ELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPL 479
Query: 276 TNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLS--------GSIPSSLGNLTKLT 327
NL IL+L +N+++ + L+ L L L N L+ G L L+ L
Sbjct: 480 RNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLH 539
Query: 328 ILYLSDNLLFGSIPCEI-GNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSG 386
IL L N F IP E+ +L L ++LG N L+ N +L +L L NL++
Sbjct: 540 ILNLESN-GFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITS 598
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 132/292 (45%), Gaps = 48/292 (16%)
Query: 814 IGTGGQGSVYRA------ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI-RHRN 866
+G G G V A + + VAVK + +T ++ ++E+K L+ + H N
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS--AHLTEREALMSELKVLSYLGNHMN 106
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSL---------AMILSNATSA------EELGWTQRM 911
IV G C+ + ++ EY G L + I S + A L +
Sbjct: 107 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 166
Query: 912 NVIKGVADALSYLHN-DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTE 970
+ VA +++L + +C ++RD++++N+LL + DFG+++ +K DS+ +
Sbjct: 167 SFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 971 LAGT--IGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRT 1027
+ ++APE + T +SDV+S+G+ E G P + S +
Sbjct: 223 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM----PVDSKFYKM 278
Query: 1028 LDE---ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
+ E +L P AP+ ++ IM+ +C D +P RPT +++ QL++
Sbjct: 279 IKEGFRMLSPE-HAPA-----EMYDIMK---TCWDADPLKRPTFKQIVQLIE 321
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
+ +F + IG G G VY+A +GE+VA+KK +E + E+ L E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 59
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H NIVK ++V+E+L + ++A + L + + + + L+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
+ H+ +++RD+ +N+L++ E ++DFG++++ + T+ Y APE+
Sbjct: 118 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 983 AYTMKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/237 (24%), Positives = 101/237 (42%), Gaps = 16/237 (6%)
Query: 806 NDFDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIR- 863
++F+ +G G G V A + +G++ AVK ++ + + + E + L+ R
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 864 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSY 923
H + + + F V E++ G L + + +E + + AL +
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDE---ARARFYAAEIISALMF 139
Query: 924 LHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELA 983
LH+ I+YRD+ NVLLD E ++DFG+ K + GT Y+APE+
Sbjct: 140 LHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEIL 196
Query: 984 YTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPAPS 1040
M D ++ GVL E + G P + + N D + IL+ + P+
Sbjct: 197 QEMLYGPAVDWWAMGVLLYEMLCGHAPFE--------AENEDDLFEAILNDEVVYPT 245
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 132/292 (45%), Gaps = 48/292 (16%)
Query: 814 IGTGGQGSVYRA------ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI-RHRN 866
+G G G V A + + VAVK + +T ++ ++E+K L+ + H N
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS--AHLTEREALMSELKVLSYLGNHMN 111
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSL---------AMILSNATSA------EELGWTQRM 911
IV G C+ + ++ EY G L + I S + A L +
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 912 NVIKGVADALSYLHN-DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTE 970
+ VA +++L + +C ++RD++++N+LL + DFG+++ +K DS+ +
Sbjct: 172 SFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 971 LAGT--IGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRT 1027
+ ++APE + T +SDV+S+G+ E G P + S +
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM----PVDSKFYKM 283
Query: 1028 LDE---ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
+ E +L P AP+ ++ IM+ +C D +P RPT +++ QL++
Sbjct: 284 IKEGFRMLSPE-HAPA-----EMYDIMK---TCWDADPLKRPTFKQIVQLIE 326
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 35/249 (14%)
Query: 843 LSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----- 897
LS++ + E + + +H+NI+ G C+ +++ EY G+L L
Sbjct: 84 LSDLVSEMEMMKMIG-----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 898 --------NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYE 949
N E++ + ++ +A + YL + ++RD++++NVL+
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNV 195
Query: 950 AHVSDFGISKSLKPDSSNWTELAG--TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK- 1006
++DFG+++ + G + ++APE + T +SDV+SFGVL E
Sbjct: 196 MRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
Query: 1007 GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRP 1066
G P I L + L E R+ P+ N ++L +M C P RP
Sbjct: 256 GGSPYPGIP-----VEELFKLLKE--GHRMDKPA-NCTNELYMMMR---DCWHAVPSQRP 304
Query: 1067 TMQKVSQLL 1075
T +++ + L
Sbjct: 305 TFKQLVEDL 313
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 131/292 (44%), Gaps = 48/292 (16%)
Query: 814 IGTGGQGSVYRA------ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI-RHRN 866
+G G G V A + + VAVK + +T ++ ++E+K L+ + H N
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS--AHLTEREALMSELKVLSYLGNHMN 104
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSL---------AMILSNATSA------EELGWTQRM 911
IV G C+ + ++ EY G L + I S + A L +
Sbjct: 105 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 164
Query: 912 NVIKGVADALSYL-HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTE 970
+ VA +++L +C ++RD++++N+LL + DFG+++ +K DS+ +
Sbjct: 165 SFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 971 LAGT--IGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRT 1027
+ ++APE + T +SDV+S+G+ E G P + S +
Sbjct: 221 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM----PVDSKFYKM 276
Query: 1028 LDE---ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
+ E +L P AP+ ++ IM+ +C D +P RPT +++ QL++
Sbjct: 277 IKEGFRMLSPE-HAPA-----EMYDIMK---TCWDADPLKRPTFKQIVQLIE 319
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 35/249 (14%)
Query: 843 LSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----- 897
LS++ + E + + +H+NI+ G C+ +++ EY G+L L
Sbjct: 71 LSDLVSEMEMMKMIG-----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 125
Query: 898 --------NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYE 949
N E++ + ++ +A + YL + ++RD++++NVL+
Sbjct: 126 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNV 182
Query: 950 AHVSDFGISKSLKPDSSNWTELAG--TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK- 1006
++DFG+++ + G + ++APE + T +SDV+SFGVL E
Sbjct: 183 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 242
Query: 1007 GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRP 1066
G P I L + L E R+ P+ N ++L +M C P RP
Sbjct: 243 GGSPYPGIP-----VEELFKLLKE--GHRMDKPA-NCTNELYMMMR---DCWHAVPSQRP 291
Query: 1067 TMQKVSQLL 1075
T +++ + L
Sbjct: 292 TFKQLVEDL 300
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 94 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 149
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 206
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 207 QTVDIWSVGCIMAELLTGR 225
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase Erk1
Length = 382
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G V A + VA+KK SP + CQ+ L E++ L RH N++
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKI-SPFEHQTYCQRT-LREIQILLRFRHENVIGIRD 108
Query: 873 FCSHA-----RHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ R +IV + +E ++ S S + + + + + L Y+H+
Sbjct: 109 ILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY-----FLYQILRGLKYIHS- 162
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN---WTELAGTIGYVAPELAY 984
+++RD+ N+L++ + + DFG+++ P+ + TE T Y APE+
Sbjct: 163 --ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 985 TMKVTEKS-DVYSFGVLALEAIK------GKHPRDFISSI 1017
K KS D++S G + E + GKH D ++ I
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 106/227 (46%), Gaps = 18/227 (7%)
Query: 808 FDEEHCIGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
+D +GTG G V+R E ++G A K +P S+ ++ E+++++ +RH
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD---KETVRKEIQTMSVLRHPT 215
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
+V + ++YE++ G L + A ++ + + ++ V L ++H
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKV--ADEHNKMSEDEAVEYMRQVCKGLCHMHE 273
Query: 927 DCFPPIVYRDISSKNVLLDLEY--EAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
+ + V+ D+ +N++ + E + DFG++ L P S GT + APE+A
Sbjct: 274 NNY---VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV-TTGTAEFAAPEVAE 329
Query: 985 TMKVTEKSDVYSFGVLA------LEAIKGKHPRDFISSICSTSSNLD 1025
V +D++S GVL+ L G++ + + ++ S N+D
Sbjct: 330 GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 376
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 12/222 (5%)
Query: 791 TFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQ 849
TF R+ + I + +G+G GSV A + +G VAVKK P S + +
Sbjct: 27 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 86
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGW 907
+ + E++ L ++H N++ + AR S + YL + L+N ++L
Sbjct: 87 RTY-RELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 144
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN 967
+I + L Y+H+ I++RD+ N+ ++ + E + DFG+++ + +
Sbjct: 145 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 201
Query: 968 WTELAGTIGYVAPELAYT-MKVTEKSDVYSFGVLALEAIKGK 1008
+ T Y APE+ M + D++S G + E + G+
Sbjct: 202 YV---ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/210 (23%), Positives = 97/210 (46%), Gaps = 11/210 (5%)
Query: 805 TNDFDEEHCIGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIR 863
T+++ IG G V R +L +G A K ++ LS Q+ E + ++
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARD-HQKLEREARICRLLK 61
Query: 864 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSY 923
H NIV+ + S ++V++ + G L + + E + I+ + +A+ +
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLH 118
Query: 924 LHNDCFPPIVYRDISSKNVLLDLEYEA---HVSDFGISKSLKPDSSNWTELAGTIGYVAP 980
H +V+RD+ +N+LL + + ++DFG++ ++ D W AGT GY++P
Sbjct: 119 CHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSP 175
Query: 981 ELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
E+ + D+++ GV+ + G P
Sbjct: 176 EVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY-TMKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNAMHYN 201
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 35/249 (14%)
Query: 843 LSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----- 897
LS++ + E + + +H+NI+ G C+ +++ EY G+L L
Sbjct: 76 LSDLVSEMEMMKMIG-----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 130
Query: 898 --------NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYE 949
N E++ + ++ +A + YL + ++RD++++NVL+
Sbjct: 131 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNV 187
Query: 950 AHVSDFGISKSLKPDSSNWTELAG--TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK- 1006
++DFG+++ + G + ++APE + T +SDV+SFGVL E
Sbjct: 188 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 247
Query: 1007 GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRP 1066
G P I L + L E R+ P+ N ++L +M C P RP
Sbjct: 248 GGSPYPGIP-----VEELFKLLKE--GHRMDKPA-NCTNELYMMMR---DCWHAVPSQRP 296
Query: 1067 TMQKVSQLL 1075
T +++ + L
Sbjct: 297 TFKQLVEDL 305
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 134/283 (47%), Gaps = 19/283 (6%)
Query: 107 FPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTN 166
+L YL+L NQI I P ++N KL L + +N + Q NL+ L+ LYL+ +
Sbjct: 65 LTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDISALQ--NLTNLRELYLNED 120
Query: 167 QFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSEIGN 226
S P + +L+ +L+L N + P L N T L + + + + P I N
Sbjct: 121 NISDISP--LANLTKXYSLNLGANHNLSDLSP-LSNXTGLNYLTVTESKVKDVTP--IAN 175
Query: 227 LKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILNLPHN 286
L L L L YN++ PL +L +L + N ++ P+ N T L+ L + +N
Sbjct: 176 LTDLYSLSLNYNQIEDISPL--ASLTSLHYFTAYVNQITDITPV--ANXTRLNSLKIGNN 231
Query: 287 SLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNLLFGSIPCEIGN 346
++ P + NL L L + N++S +++ +LTKL L + N + S + N
Sbjct: 232 KITDLSP--LANLSQLTWLEIGTNQISD--INAVKDLTKLKXLNVGSNQI--SDISVLNN 285
Query: 347 LRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGSIP 389
L L L L +N+L +G LTNL TL+L N ++ P
Sbjct: 286 LSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRP 328
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 99 LHDFS-FSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSM 157
+ D S +S L Y VNQI I P +AN ++L L + +N + P + NLS
Sbjct: 189 IEDISPLASLTSLHYFTAYVNQITDITP--VANXTRLNSLKIGNNKITDLSP--LANLSQ 244
Query: 158 LKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLS 217
L L + TNQ S + L+ LK L++ N +S L NL+ L ++L NN L
Sbjct: 245 LTWLEIGTNQISDI--NAVKDLTKLKXLNVGSNQISD--ISVLNNLSQLNSLFLNNNQLG 300
Query: 218 GSIPSEIGNLKSLSGLELGYNKLSGSMPLS 247
IG L +L+ L L N ++ PL+
Sbjct: 301 NEDXEVIGGLTNLTTLFLSQNHITDIRPLA 330
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 115/242 (47%), Gaps = 18/242 (7%)
Query: 96 IGT--LHDFS-FSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQI 152
IGT + D S + +L L L + I I P +AN +K L+L +N + P +
Sbjct: 95 IGTNKITDISALQNLTNLRELYLNEDNISDISP--LANLTKXYSLNLGANHNLSDLSP-L 151
Query: 153 GNLSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLY 212
N + L L ++ ++ P I +L+ L +L L N + P L +LT+L Y
Sbjct: 152 SNXTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAY 207
Query: 213 NNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSF 272
N ++ P + N L+ L++G NK++ PL NL L L++ N +S +
Sbjct: 208 VNQITDITP--VANXTRLNSLKIGNNKITDLSPL--ANLSQLTWLEIGTNQISDIN--AV 261
Query: 273 GNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLS 332
+LT L LN+ N +S S + NL L L L+ N+L +G LT LT L+LS
Sbjct: 262 KDLTKLKXLNVGSNQISD--ISVLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLS 319
Query: 333 DN 334
N
Sbjct: 320 QN 321
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 133/331 (40%), Gaps = 68/331 (20%)
Query: 275 LTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDN 334
LTNL+ LNL N ++ P + NL L L + NK++ S+L NLT L LYL+++
Sbjct: 65 LTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD--ISALQNLTNLRELYLNED 120
Query: 335 LLFGSIPCEIGNLRYLFYLELGDN-KLSGSIPHSLGNLTNLATLYLFTNLLSGSIPSEIX 393
+ P + NL + L LG N LS P L N T L L + + + P
Sbjct: 121 NISDISP--LANLTKXYSLNLGANHNLSDLSP--LSNXTGLNYLTVTESKVKDVTP---- 172
Query: 394 XXXXXXXXXXXXXXXXXXIPYSFGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSY 453
NLT++ LS+ N + P +L L
Sbjct: 173 ----------------------IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYV 208
Query: 454 NQLQGPIPDLRNLTRLARVRLDRNHLTGNISESFGIHSNLSYINLSHKKFYGEISFDWGK 513
NQ+ P + N TRL +++ N +T +NLS W
Sbjct: 209 NQITDITP-VANXTRLNSLKIGNNKIT-----DLSPLANLS-------------QLTW-- 247
Query: 514 FPNLGTLDVSANNITGILPPEIGDSPQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRN 573
L++ N I+ I + D +LK L++ SN I +I S L L L L LN N
Sbjct: 248 ------LEIGTNQISDI--NAVKDLTKLKXLNVGSNQI-SDI-SVLNNLSQLNSLFLNNN 297
Query: 574 QFSGQLPTELGSLIQLEHLDLSSNRLSNSIP 604
Q + +G L L L LS N +++ P
Sbjct: 298 QLGNEDXEVIGGLTNLTTLFLSQNHITDIRP 328
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 116/275 (42%), Gaps = 52/275 (18%)
Query: 419 LTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQGPIPDLRNLTRLARVRLDRNH 478
LTN+ L++ N ++ P NLVKLT L + N++ I L+NLT L + L+ ++
Sbjct: 65 LTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-ISALQNLTNLRELYLNEDN 121
Query: 479 ---------LTGNISESFGIHSNLS------------YINLSHKKFYG-----------E 506
LT S + G + NLS Y+ ++ K
Sbjct: 122 ISDISPLANLTKXYSLNLGANHNLSDLSPLSNXTGLNYLTVTESKVKDVTPIANLTDLYS 181
Query: 507 ISFDWGKFPNLGTL---------DVSANNITGILPPEIGDSPQLKVLDLSSNHIVGEIPS 557
+S ++ + ++ L N IT I P + + +L L + +N I P
Sbjct: 182 LSLNYNQIEDISPLASLTSLHYFTAYVNQITDITP--VANXTRLNSLKIGNNKITDLSP- 238
Query: 558 ELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLN 617
L L L L + NQ S + L +L+ L++ SN++S+ L NL +L L
Sbjct: 239 -LANLSQLTWLEIGTNQISD--INAVKDLTKLKXLNVGSNQISD--ISVLNNLSQLNSLF 293
Query: 618 LSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIP 652
L+NNQ E + +L+ L LS N + + P
Sbjct: 294 LNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRP 328
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
Length = 313
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 35/249 (14%)
Query: 843 LSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----- 897
LS++ + E + + +H+NI+ G C+ +++ EY G+L L
Sbjct: 73 LSDLVSEMEMMKMIG-----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 127
Query: 898 --------NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYE 949
N E++ + ++ +A + YL + ++RD++++NVL+
Sbjct: 128 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNV 184
Query: 950 AHVSDFGISKSLKPDSSNWTELAG--TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK- 1006
++DFG+++ + G + ++APE + T +SDV+SFGVL E
Sbjct: 185 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 244
Query: 1007 GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRP 1066
G P I L + L E R+ P+ N ++L +M C P RP
Sbjct: 245 GGSPYPGIP-----VEELFKLLKE--GHRMDKPA-NCTNELYMMMR---DCWHAVPSQRP 293
Query: 1067 TMQKVSQLL 1075
T +++ + L
Sbjct: 294 TFKQLVEDL 302
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A 1-O-Tolyl-1,2,
3-Triazole-4-Carboxamide
Length = 348
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 12/222 (5%)
Query: 791 TFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQ 849
TF R+ + I + +G+G GSV A + +G VAVKK P S + +
Sbjct: 3 TFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 62
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGW 907
+ + E++ L ++H N++ + AR S + YL + L+N +L
Sbjct: 63 RTY-RELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCAKLTD 120
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN 967
+I + L Y+H+ I++RD+ N+ ++ + E + DFG+++ + +
Sbjct: 121 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 177
Query: 968 WTELAGTIGYVAPELAYT-MKVTEKSDVYSFGVLALEAIKGK 1008
+ T Y APE+ M + D++S G + E + G+
Sbjct: 178 YV---ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 35/249 (14%)
Query: 843 LSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----- 897
LS++ + E + + +H+NI+ G C+ +++ EY G+L L
Sbjct: 84 LSDLVSEMEMMKMIG-----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 898 --------NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYE 949
N E++ + ++ +A + YL + ++RD++++NVL+
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNV 195
Query: 950 AHVSDFGISKSLKPDSSNWTELAG--TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK- 1006
++DFG+++ + G + ++APE + T +SDV+SFGVL E
Sbjct: 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
Query: 1007 GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRP 1066
G P I L + L E R+ P+ N ++L +M C P RP
Sbjct: 256 GGSPYPGIP-----VEELFKLLKE--GHRMDKPA-NCTNELYMMMR---DCWHAVPSQRP 304
Query: 1067 TMQKVSQLL 1075
T +++ + L
Sbjct: 305 TFKQLVEDL 313
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 12/222 (5%)
Query: 791 TFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQ 849
TF R+ + I + +G+G GSV A + +G VAVKK P S + +
Sbjct: 30 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 89
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGW 907
+ + E++ L ++H N++ + AR S + YL + L+N ++L
Sbjct: 90 RTY-RELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 147
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN 967
+I + L Y+H+ I++RD+ N+ ++ + E + DFG+++ + +
Sbjct: 148 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 204
Query: 968 WTELAGTIGYVAPELAYT-MKVTEKSDVYSFGVLALEAIKGK 1008
+ T Y APE+ M + D++S G + E + G+
Sbjct: 205 YV---ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 132/292 (45%), Gaps = 48/292 (16%)
Query: 814 IGTGGQGSVYRA------ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI-RHRN 866
+G G G V A + + VAVK + +T ++ ++E+K L+ + H N
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS--AHLTEREALMSELKVLSYLGNHMN 111
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSL---------AMILSNATSA------EELGWTQRM 911
IV G C+ + ++ EY G L + I S + A L +
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 912 NVIKGVADALSYLHN-DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTE 970
+ VA +++L + +C ++RD++++N+LL + DFG+++ +K DS+ +
Sbjct: 172 SFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 971 LAGT--IGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRT 1027
+ ++APE + T +SDV+S+G+ E G P + S +
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM----PVDSKFYKM 283
Query: 1028 LDE---ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
+ E +L P AP+ ++ IM+ +C D +P RPT +++ QL++
Sbjct: 284 IKEGFRMLSPE-HAPA-----EMYDIMK---TCWDADPLKRPTFKQIVQLIE 326
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A
Putative Auto-Inhibition State
Length = 340
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 75/276 (27%), Positives = 128/276 (46%), Gaps = 40/276 (14%)
Query: 814 IGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVK-SLTEIRHRNIVKFY 871
+G G G V + + SG+I+AVK+ + + S+ Q+ L ++ S+ + V FY
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE--QKRLLMDLDISMRTVDCPFTVTFY 116
Query: 872 GFCSHARHSFIVYEYLEMGSL-----AMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
G +I E ++ SL +I T E++ ++++K AL +LH+
Sbjct: 117 GALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVK----ALEHLHS 171
Query: 927 DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL---- 982
+++RD+ NVL++ + + DFGIS L DS T AG Y+APE
Sbjct: 172 KL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV-DSVAKTIDAGCKPYMAPERINPE 228
Query: 983 ----AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
Y++ KSD++S G+ +E + P D S + L + ++E P+LPA
Sbjct: 229 LNQKGYSV----KSDIWSLGITMIELAILRFPYD---SWGTPFQQLKQVVEEP-SPQLPA 280
Query: 1039 PSCNIRDKLIS-IMEVAISCLDENPDSRPTMQKVSQ 1073
DK + ++ CL +N RPT ++ Q
Sbjct: 281 ------DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase
Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 128/276 (46%), Gaps = 40/276 (14%)
Query: 814 IGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVK-SLTEIRHRNIVKFY 871
+G G G V + + SG+I+AVK+ + + S+ Q+ L ++ S+ + V FY
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE--QKRLLMDLDISMRTVDCPFTVTFY 72
Query: 872 GFCSHARHSFIVYEYLEMGSL-----AMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
G +I E ++ SL +I T E++ ++++K AL +LH+
Sbjct: 73 GALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVK----ALEHLHS 127
Query: 927 DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL---- 982
+++RD+ NVL++ + + DFGIS L D + + AG Y+APE
Sbjct: 128 KL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID-AGCKPYMAPERINPE 184
Query: 983 ----AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDPRLPA 1038
Y++ KSD++S G+ +E + P D S + L + ++E P+LPA
Sbjct: 185 LNQKGYSV----KSDIWSLGITMIELAILRFPYD---SWGTPFQQLKQVVEEP-SPQLPA 236
Query: 1039 PSCNIRDKLIS-IMEVAISCLDENPDSRPTMQKVSQ 1073
DK + ++ CL +N RPT ++ Q
Sbjct: 237 ------DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 39/263 (14%)
Query: 833 VAVKKFHSPL----LSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLE 888
VAVK S LS++ + E + + +H+NI+ G C+ +++ EY
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIG-----KHKNIINLLGACTQDGPLYVIVEYAS 117
Query: 889 MGSLAMILS-------------NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYR 935
G+L L + E+L ++ VA + YL + ++R
Sbjct: 118 KGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHR 174
Query: 936 DISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG--TIGYVAPELAYTMKVTEKSD 993
D++++NVL+ + ++DFG+++ + G + ++APE + T +SD
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 994 VYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIME 1052
V+SFGVL E G P + L + L E R+ PS N ++L +M
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPGVP-----VEELFKLLKE--GHRMDKPS-NCTNELYMMMR 286
Query: 1053 VAISCLDENPDSRPTMQKVSQLL 1075
C P RPT +++ + L
Sbjct: 287 ---DCWHAVPSQRPTFKQLVEDL 306
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 97/202 (48%), Gaps = 19/202 (9%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + SGE VA+KK P SE+ ++ + E+ L ++H N++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY-RELLLLKHMQHENVIGLLD 90
Query: 873 FCSHARHSFIVYE-YLEM----GSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ A Y+ YL M L I+ S E++ + ++ + L Y+H+
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-----LVYQMLKGLKYIHS- 144
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-M 986
+V+RD+ N+ ++ + E + DFG+++ + + + T Y APE+ + M
Sbjct: 145 --AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV---TRWYRAPEVILSWM 199
Query: 987 KVTEKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + GK
Sbjct: 200 HYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 12/222 (5%)
Query: 791 TFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQ 849
TF R+ + I + +G+G GSV A + +G VAVKK P S + +
Sbjct: 26 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 85
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGW 907
+ + E++ L ++H N++ + AR S + YL + L+N ++L
Sbjct: 86 RTY-RELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 143
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN 967
+I + L Y+H+ I++RD+ N+ ++ + E + DFG+++ + +
Sbjct: 144 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 200
Query: 968 WTELAGTIGYVAPELAYT-MKVTEKSDVYSFGVLALEAIKGK 1008
+ T Y APE+ M + D++S G + E + G+
Sbjct: 201 YV---ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydropyrido-
Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 95 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 150
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 207
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 208 QTVDIWSVGCIMAELLTGR 226
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 99
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 100 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 155
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 156 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 212
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 213 QTVDIWSVGCIMAELLTGR 231
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 94 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 149
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 150 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 206
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 207 QTVDIWSVGCIMAELLTGR 225
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/220 (25%), Positives = 105/220 (47%), Gaps = 36/220 (16%)
Query: 814 IGTGGQGSVYRAE---LSSGEI---VAVKKFHSPLLSEMTCQQEFLNEVKSLTEI-RHRN 866
+G+G G V A +S + VAVK ++ + ++ ++E+K +T++ H N
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEK--ADSSEREALMSELKMMTQLGSHEN 110
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNAT---SAEELGWTQR--------MNVIK 915
IV G C+ + ++++EY G L L + S +E+ + + +NV+
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 916 ---------GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSS 966
VA + +L F V+RD++++NVL+ + DFG+++ + D S
Sbjct: 171 FEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD-S 226
Query: 967 NWTELAGT---IGYVAPELAYTMKVTEKSDVYSFGVLALE 1003
N+ + ++APE + T KSDV+S+G+L E
Sbjct: 227 NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWE 266
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 32/232 (13%)
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQ 909
+ F ++++ H+++V YG C + +V E+++ GSL L + + W
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW-- 114
Query: 910 RMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEA--------HVSDFGISKSL 961
++ V K +A A+ +L + +++ ++ +KN+LL E + +SD GIS ++
Sbjct: 115 KLEVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
Query: 962 KPDSSNWTELAGTIGYVAPELAYTMK-VTEKSDVYSFGVLALEAIK-GKHPRDFISSICS 1019
P L I +V PE K + +D +SFG E G P + S
Sbjct: 172 LPKDI----LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK 227
Query: 1020 TSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
DR +LPAP K + + +C+D PD RP+ + +
Sbjct: 228 LQFYEDRH-------QLPAP------KAAELANLINNCMDYEPDHRPSFRAI 266
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 10/194 (5%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMT--CQQEFLNEVKSLTEIRHRNIVKF 870
+G G +VY+A + ++ +IVA+KK SE + L E+K L E+ H NI+
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 871 YGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
H + +V++++E +I N+ L + + L YLH
Sbjct: 78 LDAFGHKSNISLVFDFMETDLEVIIKDNSLV---LTPSHIKAYMLMTLQGLEYLHQHW-- 132
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTE 990
I++RD+ N+LLD ++DFG++KS + + T Y APEL + ++
Sbjct: 133 -ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYG 191
Query: 991 KS-DVYSFGVLALE 1003
D+++ G + E
Sbjct: 192 VGVDMWAVGCILAE 205
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 35/249 (14%)
Query: 843 LSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----- 897
LS++ + E + + +H+NI+ G C+ +++ EY G+L L
Sbjct: 84 LSDLVSEMEMMKMIG-----KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 898 --------NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYE 949
N E++ + ++ +A + YL + ++RD++++NVL+
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNV 195
Query: 950 AHVSDFGISKSLKPDSSNWTELAG--TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK- 1006
++DFG+++ + G + ++APE + T +SDV+SFGVL E
Sbjct: 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
Query: 1007 GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRP 1066
G P I L + L E R+ P+ N ++L +M C P RP
Sbjct: 256 GGSPYPGIP-----VEELFKLLKE--GHRMDKPA-NCTNELYMMMR---DCWHAVPSQRP 304
Query: 1067 TMQKVSQLL 1075
T +++ + L
Sbjct: 305 TFKQLVEDL 313
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 35/249 (14%)
Query: 843 LSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----- 897
LS++ + E + + +H+NI+ G C+ +++ EY G+L L
Sbjct: 84 LSDLVSEMEMMKMIG-----KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 898 --------NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYE 949
N E++ + ++ +A + YL + ++RD++++NVL+
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNV 195
Query: 950 AHVSDFGISKSLKPDSSNWTELAG--TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK- 1006
++DFG+++ + G + ++APE + T +SDV+SFGVL E
Sbjct: 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
Query: 1007 GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRP 1066
G P I L + L E R+ P+ N ++L +M C P RP
Sbjct: 256 GGSPYPGIP-----VEELFKLLKE--GHRMDKPA-NCTNELYMMMR---DCWHAVPSQRP 304
Query: 1067 TMQKVSQLL 1075
T +++ + L
Sbjct: 305 TFKQLVEDL 313
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/204 (23%), Positives = 97/204 (47%), Gaps = 8/204 (3%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
+ +F + IG G G VY+A +GE+VA+KK +E + E+ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H NIVK ++V+E+++ + ++A + L + + + + L+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL 982
+ H+ +++RD+ +N+L++ E ++DFG++++ + T+ Y APE+
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 983 AYTMKVTEKS-DVYSFGVLALEAI 1005
K + D++S G + E +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 201
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein
Kinase And Immunoglobulin Domains
Length = 491
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 106/227 (46%), Gaps = 18/227 (7%)
Query: 808 FDEEHCIGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN 866
+D +GTG G V+R E ++G A K +P S+ ++ E+++++ +RH
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD---KETVRKEIQTMSVLRHPT 109
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
+V + ++YE++ G L + A ++ + + ++ V L ++H
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKV--ADEHNKMSEDEAVEYMRQVCKGLCHMHE 167
Query: 927 DCFPPIVYRDISSKNVLLDLEY--EAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
+ + V+ D+ +N++ + E + DFG++ L P S GT + APE+A
Sbjct: 168 NNY---VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV-TTGTAEFAAPEVAE 223
Query: 985 TMKVTEKSDVYSFGVLA------LEAIKGKHPRDFISSICSTSSNLD 1025
V +D++S GVL+ L G++ + + ++ S N+D
Sbjct: 224 GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 270
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 91 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 146
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 203
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 204 QTVDIWSVGCIMAELLTGR 222
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 91 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 146
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 203
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 204 QTVDIWSVGCIMAELLTGR 222
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 91 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 146
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 203
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 204 QTVDIWSVGCIMAELLTGR 222
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 101 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 156
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 213
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 214 QTVDIWSVGCIMAELLTGR 232
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 39/263 (14%)
Query: 833 VAVKKFHSPL----LSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLE 888
VAVK S LS++ + E + + +H+NI+ G C+ +++ EY
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIG-----KHKNIINLLGACTQDGPLYVIVEYAS 102
Query: 889 MGSLAMILS-------------NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYR 935
G+L L + E+L ++ VA + YL + ++R
Sbjct: 103 KGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHR 159
Query: 936 DISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG--TIGYVAPELAYTMKVTEKSD 993
D++++NVL+ + ++DFG+++ + G + ++APE + T +SD
Sbjct: 160 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 219
Query: 994 VYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIME 1052
V+SFGVL E G P + L + L E R+ PS N ++L +M
Sbjct: 220 VWSFGVLLWEIFTLGGSPYPGVP-----VEELFKLLKE--GHRMDKPS-NCTNELYMMMR 271
Query: 1053 VAISCLDENPDSRPTMQKVSQLL 1075
C P RPT +++ + L
Sbjct: 272 ---DCWHAVPSQRPTFKQLVEDL 291
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 33/219 (15%)
Query: 805 TNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKK---FHSPLLSEMTCQQEFLNEVKSLT 860
++DF + +G G G V A +GEIVA+KK F PL + T L E+K L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-----LREIKILK 64
Query: 861 EIRHRNIVKFYGF-----CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+H NI+ + + +I+ E ++ +I + S + + + I
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIY 119
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN-------- 967
A+ LH +++RD+ N+L++ + V DFG+++ + +++
Sbjct: 120 QTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 968 --WTELAGTIGYVAPELAYT-MKVTEKSDVYSFGVLALE 1003
TE T Y APE+ T K + DV+S G + E
Sbjct: 177 SGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAE 215
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 95 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 150
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 151 DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 207
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 208 QTVDIWSVGCIMAELLTGR 226
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide Substituted
Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 201
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine Based
Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 95 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 150
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 207
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 208 QTVDIWSVGCIMAELLTGR 226
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 12/222 (5%)
Query: 791 TFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQ 849
TF R+ + I + +G+G GSV A + +G VAVKK P S + +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGW 907
+ + E++ L ++H N++ + AR S + YL + L+N ++L
Sbjct: 67 RTY-RELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN 967
+I + L Y+H+ I++RD+ N+ ++ + E + DFG+++ + +
Sbjct: 125 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 968 WTELAGTIGYVAPELAYT-MKVTEKSDVYSFGVLALEAIKGK 1008
+ T Y APE+ M + D++S G + E + G+
Sbjct: 182 YV---ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2-
Carboxamide Inhibitor
Length = 371
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 99
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 100 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 155
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 156 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 212
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 213 QTVDIWSVGCIMAELLTGR 231
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 12/222 (5%)
Query: 791 TFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQ 849
TF R+ + I + +G+G GSV A + +G VAVKK P S + +
Sbjct: 4 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 63
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGW 907
+ + E++ L ++H N++ + AR S + YL + L+N ++L
Sbjct: 64 RTY-RELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 121
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN 967
+I + L Y+H+ I++RD+ N+ ++ + E + DFG+++ + +
Sbjct: 122 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 178
Query: 968 WTELAGTIGYVAPELAYT-MKVTEKSDVYSFGVLALEAIKGK 1008
+ T Y APE+ M + D++S G + E + G+
Sbjct: 179 YV---ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 33/219 (15%)
Query: 805 TNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKK---FHSPLLSEMTCQQEFLNEVKSLT 860
++DF + +G G G V A +GEIVA+KK F PL + T L E+K L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-----LREIKILK 64
Query: 861 EIRHRNIVKFYGF-----CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+H NI+ + + +I+ E ++ +I + S + + + I
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIY 119
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN-------- 967
A+ LH +++RD+ N+L++ + V DFG+++ + +++
Sbjct: 120 QTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 968 --WTELAGTIGYVAPELAYT-MKVTEKSDVYSFGVLALE 1003
TE T Y APE+ T K + DV+S G + E
Sbjct: 177 SGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAE 215
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
Length = 349
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 12/222 (5%)
Query: 791 TFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQ 849
TF R+ + I + +G+G GSV A + +G VAVKK P S + +
Sbjct: 4 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 63
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGW 907
+ + E++ L ++H N++ + AR S + YL + L+N ++L
Sbjct: 64 RTY-RELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 121
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN 967
+I + L Y+H+ I++RD+ N+ ++ + E + DFG+++ + +
Sbjct: 122 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 178
Query: 968 WTELAGTIGYVAPELAYT-MKVTEKSDVYSFGVLALEAIKGK 1008
+ T Y APE+ M + D++S G + E + G+
Sbjct: 179 YV---ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 201
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 12/222 (5%)
Query: 791 TFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQ 849
TF R+ + I + +G+G GSV A + +G VAVKK P S + +
Sbjct: 3 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 62
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGW 907
+ + E++ L ++H N++ + AR S + YL + L+N ++L
Sbjct: 63 RTY-RELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 120
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN 967
+I + L Y+H+ I++RD+ N+ ++ + E + DFG+++ + +
Sbjct: 121 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 177
Query: 968 WTELAGTIGYVAPELAYT-MKVTEKSDVYSFGVLALEAIKGK 1008
+ T Y APE+ M + D++S G + E + G+
Sbjct: 178 YV---ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 96 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 151
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 208
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 209 QTVDIWSVGCIMAELLTGR 227
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 201
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 101 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 156
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 213
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 214 QTVDIWSVGCIMAELLTGR 232
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 201
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 101 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 156
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 213
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 214 QTVDIWSVGCIMAELLTGR 232
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino Quinoline
Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 201
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 94 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 149
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 206
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 207 QTVDIWSVGCIMAELLTGR 225
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 91 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 146
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 147 DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 203
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 204 QTVDIWSVGCIMAELLTGR 222
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 12/222 (5%)
Query: 791 TFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQ 849
TF R+ + I + +G+G GSV A + +G VAVKK P S + +
Sbjct: 5 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 64
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGW 907
+ + E++ L ++H N++ + AR S + YL + L+N ++L
Sbjct: 65 RTY-RELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 122
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN 967
+I + L Y+H+ I++RD+ N+ ++ + E + DFG+++ + +
Sbjct: 123 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 179
Query: 968 WTELAGTIGYVAPELAYT-MKVTEKSDVYSFGVLALEAIKGK 1008
+ T Y APE+ M + D++S G + E + G+
Sbjct: 180 YV---ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 87
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 88 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 143
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 144 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 200
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 201 QTVDIWSVGCIMAELLTGR 219
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 201
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 39/263 (14%)
Query: 833 VAVKKFHSPL----LSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLE 888
VAVK S LS++ + E + + +H+NI+ G C+ +++ EY
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIG-----KHKNIINLLGACTQDGPLYVIVEYAS 110
Query: 889 MGSLAMILS-------------NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYR 935
G+L L + E+L ++ VA + YL + ++R
Sbjct: 111 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHR 167
Query: 936 DISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG--TIGYVAPELAYTMKVTEKSD 993
D++++NVL+ + ++DFG+++ + G + ++APE + T +SD
Sbjct: 168 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 227
Query: 994 VYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIME 1052
V+SFGVL E G P + L + L E R+ PS N ++L +M
Sbjct: 228 VWSFGVLLWEIFTLGGSPYPGVP-----VEELFKLLKE--GHRMDKPS-NCTNELYMMMR 279
Query: 1053 VAISCLDENPDSRPTMQKVSQLL 1075
C P RPT +++ + L
Sbjct: 280 ---DCWHAVPSQRPTFKQLVEDL 299
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 96 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 151
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV---ATRWYRAPEIMLNWMHYN 208
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 209 QTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 96 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 151
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV---ATRWYRAPEIMLNWMHYN 208
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 209 QTVDIWSVGCIMAELLTGR 227
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 39/263 (14%)
Query: 833 VAVKKFHSPL----LSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLE 888
VAVK S LS++ + E + + +H+NI+ G C+ +++ EY
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIG-----KHKNIINLLGACTQDGPLYVIVEYAS 109
Query: 889 MGSLAMILS-------------NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYR 935
G+L L + E+L ++ VA + YL + ++R
Sbjct: 110 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHR 166
Query: 936 DISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG--TIGYVAPELAYTMKVTEKSD 993
D++++NVL+ + ++DFG+++ + G + ++APE + T +SD
Sbjct: 167 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 226
Query: 994 VYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIME 1052
V+SFGVL E G P + L + L E R+ PS N ++L +M
Sbjct: 227 VWSFGVLLWEIFTLGGSPYPGVP-----VEELFKLLKE--GHRMDKPS-NCTNELYMMMR 278
Query: 1053 VAISCLDENPDSRPTMQKVSQLL 1075
C P RPT +++ + L
Sbjct: 279 ---DCWHAVPSQRPTFKQLVEDL 298
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 39/263 (14%)
Query: 833 VAVKKFHSPL----LSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLE 888
VAVK S LS++ + E + + +H+NI+ G C+ +++ EY
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIG-----KHKNIINLLGACTQDGPLYVIVEYAS 117
Query: 889 MGSLAMILS-------------NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYR 935
G+L L + E+L ++ VA + YL + ++R
Sbjct: 118 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHR 174
Query: 936 DISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG--TIGYVAPELAYTMKVTEKSD 993
D++++NVL+ + ++DFG+++ + G + ++APE + T +SD
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 994 VYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIME 1052
V+SFGVL E G P + L + L E R+ PS N ++L +M
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPGVP-----VEELFKLLKE--GHRMDKPS-NCTNELYMMMR 286
Query: 1053 VAISCLDENPDSRPTMQKVSQLL 1075
C P RPT +++ + L
Sbjct: 287 ---DCWHAVPSQRPTFKQLVEDL 306
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+ FD +GTG G V + SG A+K + ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK + ++V EY+ G + S+ + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ ++YRD+ +N+L+D + V+DFG +K +K W LAGT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LAGTPEYLAPEIIL 211
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + D ++ GVL E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 18/225 (8%)
Query: 791 TFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQ 849
TF R+ + I + +G+G GSV A + +G VAVKK P S + +
Sbjct: 27 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 86
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGW 907
+ + E++ L ++H N++ + AR S + YL + L+N ++L
Sbjct: 87 RTY-RELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 144
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN 967
+I + L Y+H+ I++RD+ N+ ++ + E + DFG+++
Sbjct: 145 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----- 196
Query: 968 WTELAGTIG---YVAPELAYT-MKVTEKSDVYSFGVLALEAIKGK 1008
E+ G + Y APE+ M + D++S G + E + G+
Sbjct: 197 -DEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating
Mutant
Length = 367
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 96 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 151
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV---ATRWYRAPEIMLNWMHYN 208
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 209 QTVDIWSVGCIMAELLTGR 227
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
Length = 306
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 39/263 (14%)
Query: 833 VAVKKFHSPL----LSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLE 888
VAVK S LS++ + E + + +H+NI+ G C+ +++ EY
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIG-----KHKNIINLLGACTQDGPLYVIVEYAS 106
Query: 889 MGSLAMILS-------------NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYR 935
G+L L + E+L ++ VA + YL + ++R
Sbjct: 107 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHR 163
Query: 936 DISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG--TIGYVAPELAYTMKVTEKSD 993
D++++NVL+ + ++DFG+++ + G + ++APE + T +SD
Sbjct: 164 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 223
Query: 994 VYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIME 1052
V+SFGVL E G P + L + L E R+ PS N ++L +M
Sbjct: 224 VWSFGVLLWEIFTLGGSPYPGVP-----VEELFKLLKE--GHRMDKPS-NCTNELYMMMR 275
Query: 1053 VAISCLDENPDSRPTMQKVSQLL 1075
C P RPT +++ + L
Sbjct: 276 ---DCWHAVPSQRPTFKQLVEDL 295
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
Length = 317
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 39/263 (14%)
Query: 833 VAVKKFHSPL----LSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLE 888
VAVK S LS++ + E + + +H+NI+ G C+ +++ EY
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIG-----KHKNIINLLGACTQDGPLYVIVEYAS 117
Query: 889 MGSLAMILS-------------NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYR 935
G+L L + E+L ++ VA + YL + ++R
Sbjct: 118 KGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHR 174
Query: 936 DISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG--TIGYVAPELAYTMKVTEKSD 993
D++++NVL+ + ++DFG+++ + G + ++APE + T +SD
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 994 VYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIME 1052
V+SFGVL E G P + L + L E R+ PS N ++L +M
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPGVP-----VEELFKLLKE--GHRMDKPS-NCTNELYMMMR 286
Query: 1053 VAISCLDENPDSRPTMQKVSQLL 1075
C P RPT +++ + L
Sbjct: 287 ---DCWHAVPSQRPTFKQLVEDL 306
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 39/263 (14%)
Query: 833 VAVKKFHSPL----LSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLE 888
VAVK S LS++ + E + + +H+NI+ G C+ +++ EY
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIG-----KHKNIINLLGACTQDGPLYVIVEYAS 117
Query: 889 MGSLAMILS-------------NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYR 935
G+L L + E+L ++ VA + YL + ++R
Sbjct: 118 KGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHR 174
Query: 936 DISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG--TIGYVAPELAYTMKVTEKSD 993
D++++NVL+ + ++DFG+++ + G + ++APE + T +SD
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 994 VYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIME 1052
V+SFGVL E G P + L + L E R+ PS N ++L +M
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPGVP-----VEELFKLLKE--GHRMDKPS-NCTNELYMMMR 286
Query: 1053 VAISCLDENPDSRPTMQKVSQLL 1075
C P RPT +++ + L
Sbjct: 287 ---DCWHAVPSQRPTFKQLVEDL 306
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 201
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With A
Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N +++L +I + L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+ + + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 201
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 102/233 (43%), Gaps = 32/233 (13%)
Query: 801 IVRATNDFDEEHCIGTG--GQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKS 858
I+ ++ +D IG+G G + R +L+ E+VAVK + Q+E +N
Sbjct: 15 IMHDSDRYDFVKDIGSGNFGVARLMRDKLTK-ELVAVKYIERGAAIDENVQREIINH--- 70
Query: 859 LTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVA 918
+RH NIV+F H I+ EY G L + NA E + + +
Sbjct: 71 -RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSE---DEARFFFQQLL 126
Query: 919 DALSYLHNDCFPPIVYRDISSKNVLLD--LEYEAHVSDFGISKS----LKPDSSNWTELA 972
+SY H+ I +RD+ +N LLD + DFG SKS +P S+
Sbjct: 127 SGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----V 178
Query: 973 GTIGYVAPELAYTMKVTEK-SDVYSFGVLALEAIKG-------KHPRDFISSI 1017
GT Y+APE+ + K +DV+S GV + G + PRD+ +I
Sbjct: 179 GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTI 231
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein
Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein
Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+ FD +GTG G V + SG A+K + ++ + LNE + L +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK + ++V EY+ G + L E + YL
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE---PHARFYAAQIVLTFEYL 178
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ ++YRD+ +N+L+D + V+DFG +K +K + WT L GT Y+APE+
Sbjct: 179 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GATWT-LCGTPEYLAPEIIL 232
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + D ++ GVL E G P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase
11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 14/200 (7%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
+G+G GSV Y A L + VAVKK P S + ++ + E++ L ++H N++
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 84
Query: 871 YGFCSHARHSFIVYE-YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
+ A E YL + L+N + L ++ + L Y+H+
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS--- 141
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKV 988
I++RD+ NV ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 142 AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYV---ATRWYRAPEIMLNWMHY 198
Query: 989 TEKSDVYSFGVLALEAIKGK 1008
+ D++S G + E ++GK
Sbjct: 199 NQTVDIWSVGCIMAELLQGK 218
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 123/284 (43%), Gaps = 7/284 (2%)
Query: 96 IGTLHDFSFSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNL 155
I TL+ F+SFPHL L+L N + + P N L+ L L SN L
Sbjct: 44 IKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 103
Query: 156 SMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNS 215
S L L +S N+ + L LK+L + +N L + L +L + L +
Sbjct: 104 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCN 163
Query: 216 LSGSIPSE-IGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDL-HDNSLSGSIPLSFG 273
L+ SIP+E + +L L L L + ++ S L L L++ H L P
Sbjct: 164 LT-SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY 222
Query: 274 NLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSD 333
L NL L++ H +L+ + +L L L LS+N +S S L L +L + L
Sbjct: 223 GL-NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVG 281
Query: 334 NLLFGSIPCEIGNLRYLFYLELGDNKLSG---SIPHSLGNLTNL 374
L P L YL L + N+L+ S+ HS+GNL L
Sbjct: 282 GQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETL 325
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 65/160 (40%), Gaps = 1/160 (0%)
Query: 533 PEIGDSPQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHL 592
PE G + ++LDL N I E L +L LN N S P +L L L
Sbjct: 27 PE-GIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTL 85
Query: 593 DLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIP 652
L SNRL G L L L++S N+ + + +L L++ N L
Sbjct: 86 GLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISH 145
Query: 653 SQVCSMQSLEKLNLAHNNLSGFIPRCFKEMHGLVYIDISY 692
+ SLE+L L NL+ +HGL+ + + +
Sbjct: 146 RAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRH 185
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 133/352 (37%), Gaps = 32/352 (9%)
Query: 233 LELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSI 292
L+LG N++ + P+L L+L++N +S P +F NL NL L L N L
Sbjct: 37 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL---- 92
Query: 293 PSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNLLFGSIPCEIGNLRYLFY 352
L LG + + L NLTKL I S+N + + +L L
Sbjct: 93 --------KLIPLG---------VFTGLSNLTKLDI---SENKIVILLDYMFQDLYNLKS 132
Query: 353 LELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGSIPSEIXXXXXXXXXXXXXXXXXXXI 412
LE+GDN L + L +L L L L+ SIP+E I
Sbjct: 133 LEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT-SIPTEALSHLHGLIVLRLRHLNINAI 191
Query: 413 -PYSFGNLTNMIVLSI-YSNALSGAIPKEYGNLVKLTLLVLSYNQLQGPIPDLRNLTRLA 470
YSF L + VL I + L P L +L + N P +R+L L
Sbjct: 192 RDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLR 251
Query: 471 RVRLDRNHLTGNISESFGIHS--NLSYINLSHKKFYGEISFDWGKFPNLGTLDVSANNIT 528
+ L N ++ E +H L I L + + + L L+VS N +T
Sbjct: 252 FLNLSYNPIS--TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT 309
Query: 529 GILPPEIGDSPQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLP 580
+ L+ L L SN + + L R +L NR Q + P
Sbjct: 310 TLEESVFHSVGNLETLILDSNPLACDC-RLLWVFRRRWRLNFNRQQPTCATP 360
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 106/283 (37%), Gaps = 25/283 (8%)
Query: 343 EIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGSIPSEIXXXXXXXXXX 402
E + +L LEL +N +S P + NL NL TL L +N L
Sbjct: 51 EFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLD 110
Query: 403 XXXXXXXXXIPYSFGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQG-PIP 461
+ Y F +L N+ L + N L + + L L L L L P
Sbjct: 111 ISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170
Query: 462 DLRNLTRLARVRLDRNHLTGNISESFGIHSNLSYINLSHKKFYGEISFDWGKFPNLGTLD 521
L +L L +RL ++ SF L + +SH + ++ + NL +L
Sbjct: 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLS 230
Query: 522 VSANNITGILPPEIGDSPQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPT 581
++ N+T + + L+ L+LS N I + G +
Sbjct: 231 ITHCNLTAVPYLAVRHLVYLRFLNLSYNPI---------------------STIEGSM-- 267
Query: 582 ELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFS 624
L L++L+ + L +L+ P + L L LN+S NQ +
Sbjct: 268 -LHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT 309
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 75/181 (41%), Gaps = 26/181 (14%)
Query: 516 NLGTLDVSANNITGILPPEIGDSPQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQF 575
NL LD+S N I +L D LK L++ N +V L SL +LTL +
Sbjct: 105 NLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNL 164
Query: 576 SGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFI 635
+ +PTE +L +L L L L + + ++
Sbjct: 165 TS-IPTE-----------------------ALSHLHGLIVLRLRHLNINAIRDYSFKRLY 200
Query: 636 HLSDLDLSH-NFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCFKEMHGLVYIDISYNK 694
L L++SH +L P+ + + +L L++ H NL+ + + L ++++SYN
Sbjct: 201 RLKVLEISHWPYLDTMTPNCLYGL-NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNP 259
Query: 695 L 695
+
Sbjct: 260 I 260
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 12/222 (5%)
Query: 791 TFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQ 849
TF R+ + I + +G+G GSV A + +G VAVKK P S + +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 850 QEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGW 907
+ + E++ L ++H N++ + AR S + YL + L+N ++L
Sbjct: 67 RTY-RELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN 967
+I + L Y+H+ I++RD+ N+ ++ + E + DFG+++
Sbjct: 125 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDE 178
Query: 968 WTELAGTIGYVAPELAYT-MKVTEKSDVYSFGVLALEAIKGK 1008
T T Y APE+ M + D++S G + E + G+
Sbjct: 179 MTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 57.8 bits (138), Expect = 4e-08, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 24/207 (11%)
Query: 814 IGTGGQGSVYRAELS------SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
+G G G VY ++S S VAVK P + + +FL E ++++ H+NI
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQDELDFLMEALIISKLNHQNI 96
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNA----TSAEELGWTQRMNVIKGVADALSY 923
V+ G + FI+ E + G L L + L ++V + +A Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 924 LHNDCFPPIVYRDISSKNVLLDLE---YEAHVSDFGISKSLKPDSSNWTELAGT----IG 976
L + F ++RDI+++N LL A + DFG+++ + +++ G +
Sbjct: 157 LEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPVK 211
Query: 977 YVAPELAYTMKVTEKSDVYSFGVLALE 1003
++ PE T K+D +SFGVL E
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWE 238
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 57.8 bits (138), Expect = 4e-08, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 24/207 (11%)
Query: 814 IGTGGQGSVYRAELS------SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
+G G G VY ++S S VAVK P + + +FL E ++++ H+NI
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQDELDFLMEALIISKLNHQNI 110
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNA----TSAEELGWTQRMNVIKGVADALSY 923
V+ G + FI+ E + G L L + L ++V + +A Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 924 LHNDCFPPIVYRDISSKNVLLDLE---YEAHVSDFGISKSLKPDSSNWTELAGT----IG 976
L + F ++RDI+++N LL A + DFG+++ + +++ G +
Sbjct: 171 LEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPVK 225
Query: 977 YVAPELAYTMKVTEKSDVYSFGVLALE 1003
++ PE T K+D +SFGVL E
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWE 252
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 111
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 112 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 167
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + DFG+++ + + T Y APE+ M
Sbjct: 168 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYV---ATRWYRAPEIMLNWMHYN 224
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 225 QTVDIWSVGCIMAELLTGR 243
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 65/269 (24%), Positives = 121/269 (44%), Gaps = 33/269 (12%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMT---CQQEFLNEVKSLTEIRHRNIVK 869
+G+G G+VY+ + GE V + +L E T +E L+E + + + +
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIP-VAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAE-ELGWTQRMNVIKGVADALSYLHNDC 928
G C + +V + + G L L + LG +N +A +SYL +
Sbjct: 84 LLGICLTSTVQ-LVTQLMPYGCL---LDHVRENRGRLGSQDLLNWCMQIAKGMSYLED-- 137
Query: 929 FPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGT--IGYVAPELAYTM 986
+V+RD++++NVL+ ++DFG+++ L D + + G I ++A E
Sbjct: 138 -VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRR 196
Query: 987 KVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDP--RLPAPS-CN 1042
+ T +SDV+S+GV E + G P D I + R + ++L+ RLP P C
Sbjct: 197 RFTHQSDVWSYGVTVWELMTFGAKPYDGIPA---------REIPDLLEKGERLPQPPICT 247
Query: 1043 IRDKLISIMEVAISCLDENPDSRPTMQKV 1071
I + + + C + + RP +++
Sbjct: 248 -----IDVYMIMVKCWMIDSECRPRFREL 271
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 122/285 (42%), Gaps = 37/285 (12%)
Query: 814 IGTGGQGSVYRAE---LSSGEIVAVKKFHSPLLSEMTCQQEF---LNEVKSLTEI-RHRN 866
+G G G V AE L + V K +L +++ ++E++ + I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 867 IVKFYGFCSHARHSFIVYEYLEMGSLAMILS-------------NATSAEELGWTQRMNV 913
I+ G C+ +++ EY G+L L + E+L ++
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 914 IKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG 973
VA + YL + ++RD++++NVL+ + ++DFG+++ + G
Sbjct: 197 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 974 T--IGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDE 1030
+ ++APE + T +SDV+SFGVL E G P + L + L E
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-----VEELFKLLKE 308
Query: 1031 ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
R+ PS N ++L +M C P RPT +++ + L
Sbjct: 309 --GHRMDKPS-NCTNELYMMMR---DCWHAVPSQRPTFKQLVEDL 347
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt Inhibitors
Length = 336
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 13/229 (5%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA----ELSSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R + +G A+K
Sbjct: 4 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ 63
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + +VK + ++V EY+ G + S+
Sbjct: 64 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---FSHLRR 120
Query: 902 AEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL 961
+ YLH+ ++YRD+ +N+L+D + V+DFG +K +
Sbjct: 121 IGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 177
Query: 962 KPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
K WT L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 178 K--GRTWT-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To (s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To (R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 13/229 (5%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA----ELSSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R + +G A+K
Sbjct: 19 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ 78
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + +VK + ++V EY+ G + S+
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---FSHLRR 135
Query: 902 AEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL 961
+ YLH+ ++YRD+ +N+L+D + V+DFG +K +
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Query: 962 KPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
K WT L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 193 K--GRTWT-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 26/211 (12%)
Query: 814 IGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRN---IVK 869
IG G GSV + SG+I+AVK+ S + + Q++ L ++ + +R + IV+
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTV--DEKEQKQLLMDLDVV--MRSSDCPYIVQ 85
Query: 870 FYGFCSHARHSFIVYEYLEMG------SLAMILSNATSAEELGWTQRMNVIKGVADALSY 923
FYG +I E + + +L + E LG + AL++
Sbjct: 86 FYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILG-----KITLATVKALNH 140
Query: 924 LHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPEL- 982
L + I++RDI N+LLD + DFGIS L DS T AG Y+APE
Sbjct: 141 LKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV-DSIAKTRDAGCRPYMAPERI 197
Query: 983 ---AYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
A +SDV+S G+ E G+ P
Sbjct: 198 DPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 15/226 (6%)
Query: 816 TGGQGSVYRAELSS----GEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFY 871
T G+GS + +L++ + VA+K LL + E+ L +RH +I+K Y
Sbjct: 16 TLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLY 75
Query: 872 GFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPP 931
+ +V EY I+ E+ G + + A+ Y H
Sbjct: 76 DVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEG----RRFFQQIICAIEYCHRH---K 128
Query: 932 IVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY-TMKVTE 990
IV+RD+ +N+LLD ++DFG+S ++ D + G+ Y APE+ +
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLS-NIMTDGNFLKTSCGSPNYAAPEVINGKLYAGP 187
Query: 991 KSDVYSFGVLALEAIKGKHPRD--FISSICSTSSNLDRTLDEILDP 1034
+ DV+S G++ + G+ P D FI ++ ++ + + L P
Sbjct: 188 EVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSP 233
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 33/219 (15%)
Query: 805 TNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKK---FHSPLLSEMTCQQEFLNEVKSLT 860
++DF + +G G G V A +GEIVA+KK F PL + T L E+K L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-----LREIKILK 64
Query: 861 EIRHRNIVKFYGF-----CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
+H NI+ + + +I+ E ++ +I + S + + + I
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIY 119
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSN-------- 967
A+ LH +++RD+ N+L++ + V DFG+++ + +++
Sbjct: 120 QTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 968 --WTELAGTIGYVAPELAYT-MKVTEKSDVYSFGVLALE 1003
E T Y APE+ T K + DV+S G + E
Sbjct: 177 SGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAE 215
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 57.4 bits (137), Expect = 5e-08, Method: Composition-based stats.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 814 IGTGGQGSVYRAELS------SGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTEIRH 864
+G G G VY ++S S VAVK L E+ +Q+ FL E +++ H
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 92
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNA----TSAEELGWTQRMNVIKGVADA 920
+NIV+ G + FI+ E + G L L + L ++V + +A
Sbjct: 93 QNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 921 LSYLHNDCFPPIVYRDISSKNVLLDLE---YEAHVSDFGISKSLKPDSSNWTELAGT--- 974
YL + F ++RDI+++N LL A + DFG+++ + +++ G
Sbjct: 153 CQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAML 207
Query: 975 -IGYVAPELAYTMKVTEKSDVYSFGVLALE 1003
+ ++ PE T K+D +SFGVL E
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 237
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex
With Crizotinib (Pf-02341066)
Length = 327
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 814 IGTGGQGSVYRAELS------SGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTEIRH 864
+G G G VY ++S S VAVK L E+ +Q+ FL E +++ H
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 92
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNA----TSAEELGWTQRMNVIKGVADA 920
+NIV+ G + FI+ E + G L L + L ++V + +A
Sbjct: 93 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 921 LSYLHNDCFPPIVYRDISSKNVLLDLE---YEAHVSDFGISKSLKPDSSNWTELAGT--- 974
YL + F ++RDI+++N LL A + DFG+++ + +++ G
Sbjct: 153 CQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAML 207
Query: 975 -IGYVAPELAYTMKVTEKSDVYSFGVLALE 1003
+ ++ PE T K+D +SFGVL E
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 237
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 76/296 (25%), Positives = 121/296 (40%), Gaps = 51/296 (17%)
Query: 793 DRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAEL---SSGEI-VAVKKFHSPLLSEMTC 848
D I +E +V + + IG G G VY E + I A+K ++EM
Sbjct: 13 DVLIPHERVVTHS-----DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR--ITEMQQ 65
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARH-SFIVYEYLEMGSLAMILSNATSAEELGW 907
+ FL E + + H N++ G ++ Y+ G L + +
Sbjct: 66 VEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSP-------- 117
Query: 908 TQRMNVIKG-------VADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKS 960
QR +K VA + YL F V+RD++++N +LD + V+DFG+++
Sbjct: 118 -QRNPTVKDLISFGLQVARGMEYLAEQKF---VHRDLAARNCMLDESFTVKVADFGLARD 173
Query: 961 LKPDSSNWT-----ELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAI-KGKHPRDFI 1014
+ D ++ + + A E T + T KSDV+SFGVL E + +G P I
Sbjct: 174 IL-DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI 232
Query: 1015 SSICSTSSNLDRTLDEILDPRLPAPS-CNIRDKLISIMEVAISCLDENPDSRPTMQ 1069
D T RLP P C D L +M+ C + +P RPT +
Sbjct: 233 DP-------FDLTHFLAQGRRLPQPEYCP--DSLYQVMQ---QCWEADPAVRPTFR 276
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 814 IGTGGQGSVYRAELS------SGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTEIRH 864
+G G G VY ++S S VAVK L E+ +Q+ FL E +++ H
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 107
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNA----TSAEELGWTQRMNVIKGVADA 920
+NIV+ G + FI+ E + G L L + L ++V + +A
Sbjct: 108 QNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 921 LSYLHNDCFPPIVYRDISSKNVLLDLE---YEAHVSDFGISKSLKPDSSNWTELAGT--- 974
YL + F ++RDI+++N LL A + DFG+++ + +++ G
Sbjct: 168 CQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAML 222
Query: 975 -IGYVAPELAYTMKVTEKSDVYSFGVLALE 1003
+ ++ PE T K+D +SFGVL E
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 252
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 814 IGTGGQGSVYRAELS------SGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTEIRH 864
+G G G VY ++S S VAVK L E+ +Q+ FL E +++ H
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 84
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNA----TSAEELGWTQRMNVIKGVADA 920
+NIV+ G + FI+ E + G L L + L ++V + +A
Sbjct: 85 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 144
Query: 921 LSYLHNDCFPPIVYRDISSKNVLLDLE---YEAHVSDFGISKSLKPDSSNWTELAGT--- 974
YL + F ++RDI+++N LL A + DFG+++ + +++ G
Sbjct: 145 CQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAML 199
Query: 975 -IGYVAPELAYTMKVTEKSDVYSFGVLALE 1003
+ ++ PE T K+D +SFGVL E
Sbjct: 200 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 229
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 814 IGTGGQGSVYRAELS------SGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTEIRH 864
+G G G VY ++S S VAVK L E+ +Q+ FL E +++ H
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 119
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNA----TSAEELGWTQRMNVIKGVADA 920
+NIV+ G + FI+ E + G L L + L ++V + +A
Sbjct: 120 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 179
Query: 921 LSYLHNDCFPPIVYRDISSKNVLLDLE---YEAHVSDFGISKSLKPDSSNWTELAGT--- 974
YL + F ++RDI+++N LL A + DFG+++ + +++ G
Sbjct: 180 CQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAML 234
Query: 975 -IGYVAPELAYTMKVTEKSDVYSFGVLALE 1003
+ ++ PE T K+D +SFGVL E
Sbjct: 235 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 264
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 814 IGTGGQGSVYRAELS------SGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTEIRH 864
+G G G VY ++S S VAVK L E+ +Q+ FL E +++ H
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 93
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNA----TSAEELGWTQRMNVIKGVADA 920
+NIV+ G + FI+ E + G L L + L ++V + +A
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 921 LSYLHNDCFPPIVYRDISSKNVLLDLE---YEAHVSDFGISKSLKPDSSNWTELAGT--- 974
YL + F ++RDI+++N LL A + DFG+++ + +++ G
Sbjct: 154 CQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAML 208
Query: 975 -IGYVAPELAYTMKVTEKSDVYSFGVLALE 1003
+ ++ PE T K+D +SFGVL E
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 238
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + D+G+++ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 201
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase
In Complex With Ch5424802
Length = 344
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 814 IGTGGQGSVYRAELS------SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
+G G G VY ++S S VAVK P + + +FL E +++ H+NI
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQDELDFLMEALIISKFNHQNI 112
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNA----TSAEELGWTQRMNVIKGVADALSY 923
V+ G + FI+ E + G L L + L ++V + +A Y
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 924 LHNDCFPPIVYRDISSKNVLLDLE---YEAHVSDFGISKSLKPDSSNWTELAGT----IG 976
L + F ++RDI+++N LL A + DFG+++ + +++ G +
Sbjct: 173 LEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPVK 227
Query: 977 YVAPELAYTMKVTEKSDVYSFGVLALE 1003
++ PE T K+D +SFGVL E
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWE 254
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 76/296 (25%), Positives = 129/296 (43%), Gaps = 46/296 (15%)
Query: 797 AYEEIVRATNDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNE 855
A E +D + +G G G V + + SG+I AVK+ + + S+ Q+ L +
Sbjct: 25 AXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQE--QKRLLXD 82
Query: 856 VKSLTEIRHRNI-----VKFYGFCSHARHSFIVYEY----LEMGSLAMILSNATSAEELG 906
+ +I R + V FYG +I E L+ +I T E++
Sbjct: 83 L----DISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDIL 138
Query: 907 WTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSS 966
++++K AL +LH+ +++RD+ NVL++ + DFGIS L D +
Sbjct: 139 GKIAVSIVK----ALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVA 192
Query: 967 NWTELAGTIGYVAPEL--------AYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSIC 1018
+ AG Y APE Y++ KSD++S G+ +E + P D S
Sbjct: 193 KDID-AGCKPYXAPERINPELNQKGYSV----KSDIWSLGITXIELAILRFPYD---SWG 244
Query: 1019 STSSNLDRTLDEILDPRLPAPSCNIRDKLIS-IMEVAISCLDENPDSRPTMQKVSQ 1073
+ L + ++E P+LPA DK + ++ CL +N RPT ++ Q
Sbjct: 245 TPFQQLKQVVEEP-SPQLPA------DKFSAEFVDFTSQCLKKNSKERPTYPELXQ 293
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 47/210 (22%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 805 TNDFDEEHCIGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIR 863
++++D + +G G V R ++G A K ++ LS Q+ E + +++
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-LEREARICRKLQ 63
Query: 864 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSY 923
H NIV+ + ++V++ + G L + + E + I+ + ++++Y
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAY 120
Query: 924 LHNDCFPPIVYRDISSKNVLLDLEYEA---HVSDFGISKSLKPDSSNWTELAGTIGYVAP 980
H++ IV+R++ +N+LL + + ++DFG++ + DS W AGT GY++P
Sbjct: 121 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSP 176
Query: 981 ELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
E+ ++ D+++ GV+ + G P
Sbjct: 177 EVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 47/210 (22%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 805 TNDFDEEHCIGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIR 863
++++D + +G G V R ++G A K ++ LS Q+ E + +++
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-LEREARICRKLQ 62
Query: 864 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSY 923
H NIV+ + ++V++ + G L + + E + I+ + ++++Y
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAY 119
Query: 924 LHNDCFPPIVYRDISSKNVLLDLEYEA---HVSDFGISKSLKPDSSNWTELAGTIGYVAP 980
H++ IV+R++ +N+LL + + ++DFG++ + DS W AGT GY++P
Sbjct: 120 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSP 175
Query: 981 ELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
E+ ++ D+++ GV+ + G P
Sbjct: 176 EVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 47/210 (22%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 805 TNDFDEEHCIGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIR 863
++++D + +G G V R ++G A K ++ LS Q+ E + +++
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-LEREARICRKLQ 63
Query: 864 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSY 923
H NIV+ + ++V++ + G L + + E + I+ + ++++Y
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAY 120
Query: 924 LHNDCFPPIVYRDISSKNVLLDLEYEA---HVSDFGISKSLKPDSSNWTELAGTIGYVAP 980
H++ IV+R++ +N+LL + + ++DFG++ + DS W AGT GY++P
Sbjct: 121 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSP 176
Query: 981 ELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
E+ ++ D+++ GV+ + G P
Sbjct: 177 EVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 97/202 (48%), Gaps = 19/202 (9%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + SGE VA+KK P SE+ ++ + E+ L ++H N++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY-RELLLLKHMQHENVIGLLD 108
Query: 873 FCSHARHSFIVYE-YLEM----GSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
+ A Y+ YL M L I+ S E++ + ++ + L Y+H+
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-----LVYQMLKGLKYIHSA 163
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-M 986
+V+RD+ N+ ++ + E + DFG+++ + + + T Y APE+ + M
Sbjct: 164 G---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYV---VTRWYRAPEVILSWM 217
Query: 987 KVTEKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + GK
Sbjct: 218 HYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled Receptor
Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled Receptor
Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 14/239 (5%)
Query: 781 GNAP--GFLSVLTFDRKIAY---EEIVRATNDFDEEHCIGTGGQGSVYRAEL-SSGEIVA 834
G AP FL L F R + + E + F + +G GG G V+ ++ ++G++ A
Sbjct: 155 GQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYA 214
Query: 835 VKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF-YGFCSHARHSFIVYEYLEMGSLA 893
KK + L + Q + E K L ++ R IV Y F + +V + G +
Sbjct: 215 CKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLC-LVMTIMNGGDIR 273
Query: 894 MILSNATSAEELGWTQRMNVI--KGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAH 951
+ N + G+ + + + L +LH I+YRD+ +NVLLD +
Sbjct: 274 YHIYN-VDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVR 329
Query: 952 VSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+SD G++ LK + AGT G++APEL + D ++ GV E I + P
Sbjct: 330 ISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 14/239 (5%)
Query: 781 GNAP--GFLSVLTFDRKIAY---EEIVRATNDFDEEHCIGTGGQGSVYRAEL-SSGEIVA 834
G AP FL L F R + + E + F + +G GG G V+ ++ ++G++ A
Sbjct: 155 GQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYA 214
Query: 835 VKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF-YGFCSHARHSFIVYEYLEMGSLA 893
KK + L + Q + E K L ++ R IV Y F + +V + G +
Sbjct: 215 CKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLC-LVMTIMNGGDIR 273
Query: 894 MILSNATSAEELGWTQRMNVI--KGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAH 951
+ N + G+ + + + L +LH I+YRD+ +NVLLD +
Sbjct: 274 YHIYN-VDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVR 329
Query: 952 VSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+SD G++ LK + AGT G++APEL + D ++ GV E I + P
Sbjct: 330 ISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 814 IGTGGQGSVYRAELS------SGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTEIRH 864
+G G G VY ++S S VAVK L E+ +Q+ FL E +++ H
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVYSEQDELDFLMEALIISKFNH 107
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNA----TSAEELGWTQRMNVIKGVADA 920
+NIV+ G + FI+ E + G L L + L ++V + +A
Sbjct: 108 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 921 LSYLHNDCFPPIVYRDISSKNVLLDLE---YEAHVSDFGISKSLKPDSSNWTELAGT--- 974
YL + F ++RDI+++N LL A + DFG+++ + +++ G
Sbjct: 168 CQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAML 222
Query: 975 -IGYVAPELAYTMKVTEKSDVYSFGVLALE 1003
+ ++ PE T K+D +SFGVL E
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 252
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 14/239 (5%)
Query: 781 GNAP--GFLSVLTFDRKIAY---EEIVRATNDFDEEHCIGTGGQGSVYRAEL-SSGEIVA 834
G AP FL L F R + + E + F + +G GG G V+ ++ ++G++ A
Sbjct: 155 GQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYA 214
Query: 835 VKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF-YGFCSHARHSFIVYEYLEMGSLA 893
KK + L + Q + E K L ++ R IV Y F + +V + G +
Sbjct: 215 CKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLC-LVMTIMNGGDIR 273
Query: 894 MILSNATSAEELGWTQRMNVI--KGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAH 951
+ N + G+ + + + L +LH I+YRD+ +NVLLD +
Sbjct: 274 YHIYN-VDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVR 329
Query: 952 VSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+SD G++ LK + AGT G++APEL + D ++ GV E I + P
Sbjct: 330 ISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 48/299 (16%)
Query: 811 EHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
+ IG G G V+R + GE VAVK F S E + +E E+ +RH NI+ F
Sbjct: 9 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFRE--AEIYQTVMLRHENILGF 63
Query: 871 YGFCSHARHSF----IVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
+ ++ +V +Y E GSL L+ T E + + A L++LH
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHM 119
Query: 927 DCF-----PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT------ELAGTI 975
+ P I +RD+ SKN+L+ ++D G+ +++ DS+ T GT
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATDTIDIAPNHRVGTK 177
Query: 976 GYVAPEL---AYTMKVTE---KSDVYSFGVLALE-----AIKGKHPR------DFISSIC 1018
Y+APE+ + MK E ++D+Y+ G++ E +I G H D + S
Sbjct: 178 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 237
Query: 1019 STSSNLDRTLDEILDPRLPA--PSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
S ++ L P +P SC + IM C N +R T ++ + L
Sbjct: 238 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMR---ECWYANGAARLTALRIKKTL 293
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf-
Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 48/299 (16%)
Query: 811 EHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
+ IG G G V+R + GE VAVK F S E + +E E+ +RH NI+ F
Sbjct: 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFRE--AEIYQTVMLRHENILGF 62
Query: 871 YGFCSHARHSF----IVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
+ ++ +V +Y E GSL L+ T E + + A L++LH
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHM 118
Query: 927 DCF-----PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT------ELAGTI 975
+ P I +RD+ SKN+L+ ++D G+ +++ DS+ T GT
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATDTIDIAPNHRVGTK 176
Query: 976 GYVAPEL---AYTMKVTE---KSDVYSFGVLALE-----AIKGKHPR------DFISSIC 1018
Y+APE+ + MK E ++D+Y+ G++ E +I G H D + S
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236
Query: 1019 STSSNLDRTLDEILDPRLPA--PSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
S ++ L P +P SC + IM C N +R T ++ + L
Sbjct: 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMR---ECWYANGAARLTALRIKKTL 292
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 48/299 (16%)
Query: 811 EHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
+ IG G G V+R + GE VAVK F S E + +E E+ +RH NI+ F
Sbjct: 34 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFRE--AEIYQTVMLRHENILGF 88
Query: 871 YGFCSHARHSF----IVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
+ ++ +V +Y E GSL L+ T E + + A L++LH
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHM 144
Query: 927 DCF-----PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT------ELAGTI 975
+ P I +RD+ SKN+L+ ++D G+ +++ DS+ T GT
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATDTIDIAPNHRVGTK 202
Query: 976 GYVAPEL---AYTMKVTE---KSDVYSFGVLALE-----AIKGKHPR------DFISSIC 1018
Y+APE+ + MK E ++D+Y+ G++ E +I G H D + S
Sbjct: 203 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 262
Query: 1019 STSSNLDRTLDEILDPRLPA--PSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
S ++ L P +P SC + IM C N +R T ++ + L
Sbjct: 263 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMR---ECWYANGAARLTALRIKKTL 318
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 48/299 (16%)
Query: 811 EHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
+ IG G G V+R + GE VAVK F S E + +E E+ +RH NI+ F
Sbjct: 14 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFRE--AEIYQTVMLRHENILGF 68
Query: 871 YGFCSHARHSF----IVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
+ ++ +V +Y E GSL L+ T E + + A L++LH
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHM 124
Query: 927 DCF-----PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT------ELAGTI 975
+ P I +RD+ SKN+L+ ++D G+ +++ DS+ T GT
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATDTIDIAPNHRVGTK 182
Query: 976 GYVAPEL---AYTMKVTE---KSDVYSFGVLALE-----AIKGKHPR------DFISSIC 1018
Y+APE+ + MK E ++D+Y+ G++ E +I G H D + S
Sbjct: 183 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 242
Query: 1019 STSSNLDRTLDEILDPRLPA--PSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
S ++ L P +P SC + IM C N +R T ++ + L
Sbjct: 243 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMR---ECWYANGAARLTALRIKKTL 298
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With 4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 48/299 (16%)
Query: 811 EHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
+ IG G G V+R + GE VAVK F S E + +E E+ +RH NI+ F
Sbjct: 11 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFRE--AEIYQTVMLRHENILGF 65
Query: 871 YGFCSHARHSF----IVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
+ ++ +V +Y E GSL L+ T E + + A L++LH
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHM 121
Query: 927 DCF-----PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT------ELAGTI 975
+ P I +RD+ SKN+L+ ++D G+ +++ DS+ T GT
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATDTIDIAPNHRVGTK 179
Query: 976 GYVAPEL---AYTMKVTE---KSDVYSFGVLALE-----AIKGKHPR------DFISSIC 1018
Y+APE+ + MK E ++D+Y+ G++ E +I G H D + S
Sbjct: 180 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 239
Query: 1019 STSSNLDRTLDEILDPRLPA--PSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
S ++ L P +P SC + IM C N +R T ++ + L
Sbjct: 240 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMR---ECWYANGAARLTALRIKKTL 295
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 48/299 (16%)
Query: 811 EHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
+ IG G G V+R + GE VAVK F S E + +E E+ +RH NI+ F
Sbjct: 47 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFRE--AEIYQTVMLRHENILGF 101
Query: 871 YGFCSHARHSF----IVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
+ ++ +V +Y E GSL L+ T E + + A L++LH
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHM 157
Query: 927 DCF-----PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT------ELAGTI 975
+ P I +RD+ SKN+L+ ++D G+ +++ DS+ T GT
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATDTIDIAPNHRVGTK 215
Query: 976 GYVAPEL---AYTMKVTE---KSDVYSFGVLALE-----AIKGKHPR------DFISSIC 1018
Y+APE+ + MK E ++D+Y+ G++ E +I G H D + S
Sbjct: 216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 275
Query: 1019 STSSNLDRTLDEILDPRLPA--PSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
S ++ L P +P SC + IM C N +R T ++ + L
Sbjct: 276 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMR---ECWYANGAARLTALRIKKTL 331
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 56.6 bits (135), Expect = 8e-08, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 814 IGTGGQGSVYRAELS------SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
+G G G VY ++S S VAVK P + + +FL E +++ H+NI
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNA----TSAEELGWTQRMNVIKGVADALSY 923
V+ G + FI+ E + G L L + L ++V + +A Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 924 LHNDCFPPIVYRDISSKNVLLDLE---YEAHVSDFGISKSLKPDSSNWTELAGT----IG 976
L + F ++RDI+++N LL A + DFG+++ + +++ G +
Sbjct: 157 LEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIY--RASYYRKGGCAMLPVK 211
Query: 977 YVAPELAYTMKVTEKSDVYSFGVLALE 1003
++ PE T K+D +SFGVL E
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWE 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With A
Peptide Inhibitor And Detergent
Length = 350
Score = 56.6 bits (135), Expect = 8e-08, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+ FD +GTG G V + SG A+K + ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK + ++V EY+ G + S+ + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFAEPHARFYAAQIVLTFEYL 157
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ ++YRD+ +N+L+D + V+DFG +K +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + D ++ GVL E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type
Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild Type
Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 91/217 (41%), Gaps = 35/217 (16%)
Query: 814 IGTGGQGSVYRAEL--------SSGEIVAVKKFHSPL----LSEMTCQQEFLNEVKSLTE 861
+G G G V AE VAVK LS++ + E + +
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG---- 144
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS-------------NATSAEELGWT 908
+H+NI+ G C+ +++ EY G+L L N E++ +
Sbjct: 145 -KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNW 968
++ +A + YL + ++RD++++NVL+ ++DFG+++ +
Sbjct: 204 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 260
Query: 969 TELAGT--IGYVAPELAYTMKVTEKSDVYSFGVLALE 1003
G + ++APE + T +SDV+SFGVL E
Sbjct: 261 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE 297
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 56.6 bits (135), Expect = 8e-08, Method: Composition-based stats.
Identities = 47/210 (22%), Positives = 99/210 (47%), Gaps = 11/210 (5%)
Query: 805 TNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIR 863
T+++ +G G V R ++ +G+ A K ++ LS Q+ E + ++
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARD-HQKLEREARICRLLK 61
Query: 864 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSY 923
H NIV+ + S ++V++ + G L + + E + I+ + +++++
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILESVNH 118
Query: 924 LHNDCFPPIVYRDISSKNVLLDLEYEA---HVSDFGISKSLKPDSSNWTELAGTIGYVAP 980
H IV+RD+ +N+LL + + ++DFG++ ++ D W AGT GY++P
Sbjct: 119 CH---LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSP 175
Query: 981 ELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
E+ + D+++ GV+ + G P
Sbjct: 176 EVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 56.6 bits (135), Expect = 8e-08, Method: Composition-based stats.
Identities = 47/210 (22%), Positives = 99/210 (47%), Gaps = 11/210 (5%)
Query: 805 TNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIR 863
T+++ +G G V R ++ +G+ A K ++ LS Q+ E + ++
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARD-HQKLEREARICRLLK 61
Query: 864 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSY 923
H NIV+ + S ++V++ + G L + + E + I+ + +++++
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILESVNH 118
Query: 924 LHNDCFPPIVYRDISSKNVLLDLEYEA---HVSDFGISKSLKPDSSNWTELAGTIGYVAP 980
H IV+RD+ +N+LL + + ++DFG++ ++ D W AGT GY++P
Sbjct: 119 CH---LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSP 175
Query: 981 ELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
E+ + D+++ GV+ + G P
Sbjct: 176 EVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 56.6 bits (135), Expect = 8e-08, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 814 IGTGGQGSVYRAELS------SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
+G G G VY ++S S VAVK P + + +FL E +++ H+NI
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQDELDFLMEALIISKFNHQNI 113
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNA----TSAEELGWTQRMNVIKGVADALSY 923
V+ G + FI+ E + G L L + L ++V + +A Y
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 924 LHNDCFPPIVYRDISSKNVLLDLE---YEAHVSDFGISKSLKPDSSNWTELAGT----IG 976
L + F ++RDI+++N LL A + DFG+++ + + + G +
Sbjct: 174 LEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAGYYRKGGCAMLPVK 228
Query: 977 YVAPELAYTMKVTEKSDVYSFGVLALE 1003
++ PE T K+D +SFGVL E
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWE 255
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 35/249 (14%)
Query: 843 LSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----- 897
LS++ + E + + +H+NI+ G C+ +++ Y G+L L
Sbjct: 84 LSDLVSEMEMMKMIG-----KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPP 138
Query: 898 --------NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYE 949
N E++ + ++ +A + YL + ++RD++++NVL+
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNV 195
Query: 950 AHVSDFGISKSLKPDSSNWTELAG--TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK- 1006
++DFG+++ + G + ++APE + T +SDV+SFGVL E
Sbjct: 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
Query: 1007 GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRP 1066
G P I L + L E R+ P+ N ++L +M C P RP
Sbjct: 256 GGSPYPGIP-----VEELFKLLKE--GHRMDKPA-NCTNELYMMMR---DCWHAVPSQRP 304
Query: 1067 TMQKVSQLL 1075
T +++ + L
Sbjct: 305 TFKQLVEDL 313
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 92/219 (42%), Gaps = 25/219 (11%)
Query: 799 EEIVRATNDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVK 857
EE+ AT+ +G G G V+R E +G AVKK + + E L
Sbjct: 90 EEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVF-----RAEELMACA 140
Query: 858 SLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGV 917
LT R IV YG I E LE GSL ++ E + + +
Sbjct: 141 GLTSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE---DRALYYLGQA 194
Query: 918 ADALSYLHNDCFPPIVYRDISSKNVLLDLE-YEAHVSDFGISKSLKPDSSNWTELAG--- 973
+ L YLH+ I++ D+ + NVLL + A + DFG + L+PD + L G
Sbjct: 195 LEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYI 251
Query: 974 --TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
T ++APE+ K DV+S + L + G HP
Sbjct: 252 PGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+ FD +GTG G V + SG A+K + ++ + LNE + L +
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK + ++V EY+ G + S+ + YL
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ ++YRD+ +N+L+D + V+DFG +K +K W L GT Y+APE+
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 212
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + D ++ GVL E G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-dependent
Protein Kinase Complexed With A Phosphorylated Substrate
Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase Catalytic
Subunit Alpha In Complex With Peptide Inhibitor Pki Alpha
(6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+ FD +GTG G V + SG A+K + ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK + ++V EY+ G + S+ + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ ++YRD+ +N+L+D + V+DFG +K +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + D ++ GVL E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+ FD +GTG G V + SG A+K + ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK + ++V EY+ G + S+ + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ ++YRD+ +N+L+D + V+DFG +K +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + D ++ GVL E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 15/230 (6%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAEL----SSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R L +G A+K
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQ 77
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNAT 900
+ ++ + LNE + L + +VK Y F ++ + ++V EY+ G + S+
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNS-NLYMVMEYVPGGEM---FSHLR 133
Query: 901 SAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKS 960
+ YLH+ ++YRD+ +N+L+D + V+DFG +K
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 961 LKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 191 VK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 15/230 (6%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAEL----SSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R L +G A+K
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQ 77
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNAT 900
+ ++ + LNE + L + +VK Y F ++ + ++V EY+ G + S+
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNS-NLYMVMEYVPGGEM---FSHLR 133
Query: 901 SAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKS 960
+ YLH+ ++YRD+ +N+L+D + V+DFG +K
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 961 LKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 191 VK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+ FD +GTG G V + SG A+K + ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK + ++V EY+ G + S+ + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ ++YRD+ +N+L+D + V+DFG +K +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + D ++ GVL E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of
Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 15/230 (6%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAEL----SSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R L +G A+K
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQ 77
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNAT 900
+ ++ + LNE + L + +VK Y F ++ + ++V EY+ G + S+
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNS-NLYMVMEYVPGGEM---FSHLR 133
Query: 901 SAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKS 960
+ YLH+ ++YRD+ +N+L+D + V+DFG +K
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 961 LKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 191 VK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent
Protein Kinase And Adenosine Further Defines
Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+ FD +GTG G V + SG A+K + ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK + ++V EY+ G + S+ + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ ++YRD+ +N+L+D + V+DFG +K +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + D ++ GVL E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+ FD +GTG G V + SG A+K + ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK + ++V EY+ G + S+ + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ ++YRD+ +N+L+D + V+DFG +K +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + D ++ GVL E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With
A Staurosporine Analogue
Length = 290
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 75/301 (24%), Positives = 122/301 (40%), Gaps = 51/301 (16%)
Query: 808 FDEEHC--IGTGGQGSVYRAEL--------SSGEIVAVKKFHSPLLSEMTCQQEFLNEVK 857
F+E H I G+G+ EL ++G +VAVK+ S Q++F E++
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH---SGPDQQRDFQREIQ 60
Query: 858 SLTEIRHRNIVKFYGFC-SHARHSF-IVYEYLEMGSLAMILSNATSAEELGWTQRMNVIK 915
L + IVK+ G R +V EYL G L L + L ++ +
Sbjct: 61 ILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSS 118
Query: 916 GVADALSYL-HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTEL--- 971
+ + YL C V+RD++++N+L++ E ++DFG++K L D
Sbjct: 119 QICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPG 174
Query: 972 AGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEI 1031
I + APE + +SDV+SFGV+ E + CS S+ R +
Sbjct: 175 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT------YCDKSCSPSAEFLRMMGCE 228
Query: 1032 LD--------------PRLPA-PSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLLK 1076
D RLPA P+C + E+ C +P RP+ + L
Sbjct: 229 RDVPALCRLLELLEEGQRLPAPPACPAE-----VHELMKLCWAPSPQDRPSFSALGPQLD 283
Query: 1077 I 1077
+
Sbjct: 284 M 284
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase
Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase
Catalytic Subunit
Length = 350
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+ FD +GTG G V + SG A+K + ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK + ++V EY+ G + S+ + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ ++YRD+ +N+L+D + V+DFG +K +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LXGTPEYLAPEIIL 211
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + D ++ GVL E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y-
27632
Length = 350
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+ F+ IGTG G V + + +G A+K + ++ + LNE + L +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK + ++V EY+ G + S+ + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDM---FSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ ++YRD+ +N+L+D + V+DFG +K +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + D ++ GVL E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+ F+ IGTG G V + + +G A+K + ++ + LNE + L +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK + ++V EY+ G + S+ + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDM---FSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ ++YRD+ +N+L+D + V+DFG +K +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + D ++ GVL E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 33/208 (15%)
Query: 814 IGTGGQGSVYRAE-LSSGEIVAVKKF----HSPLLSEMTCQQEFLNEVKSLTEIRHRNIV 868
IG G G V++ +G+IVA+KKF P++ ++ L E++ L +++H N+V
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIA-----LREIRMLKQLKHPNLV 65
Query: 869 KFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQR---MNVIKGVA----DAL 921
R +V+EY + T EL QR +++K + A+
Sbjct: 66 NLLEVFRRKRRLHLVFEY----------CDHTVLHELDRYQRGVPEHLVKSITWQTLQAV 115
Query: 922 SYLH-NDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAP 980
++ H ++C ++RD+ +N+L+ + DFG ++ L S + + T Y +P
Sbjct: 116 NFCHKHNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSP 171
Query: 981 ELAY-TMKVTEKSDVYSFGVLALEAIKG 1007
EL + DV++ G + E + G
Sbjct: 172 ELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+ FD +GTG G V + SG A+K + ++ + LNE + L +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK + ++V EY+ G + S+ + YL
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYL 144
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ ++YRD+ +N+L+D + V+DFG +K +K W L GT Y+APE+
Sbjct: 145 HS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 198
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + D ++ GVL E G P
Sbjct: 199 SKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSN--ATSAEELG 906
+Q F E + L ++H NIV+FY +E G ++L TS
Sbjct: 69 RQRFKEEAEXLKGLQHPNIVRFYD----------SWESTVKGKKCIVLVTELXTSGTLKT 118
Query: 907 WTQRMNVIK---------GVADALSYLHNDCFPPIVYRDISSKNVLLDLEY-EAHVSDFG 956
+ +R V K + L +LH PPI++RD+ N+ + + D G
Sbjct: 119 YLKRFKVXKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLG 177
Query: 957 ISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISS 1016
++ +LK +S + GT + APE Y K E DVY+FG LE ++P S
Sbjct: 178 LA-TLK-RASFAKAVIGTPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATSEYP----YS 230
Query: 1017 ICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
C ++ + R + + P+ + + + E+ C+ +N D R +++ +
Sbjct: 231 ECQNAAQIYRRVTSGVK-----PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL 280
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 68/289 (23%), Positives = 121/289 (41%), Gaps = 46/289 (15%)
Query: 814 IGTGGQGSVYRAE------LSSGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTEI-R 863
+G G G V A+ ++ VAVK +L E E ++E+K L I
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVK-----MLKEGATHSEHRALMSELKILIHIGH 90
Query: 864 HRNIVKFYGFCSHARHSF-IVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H N+V G C+ ++ E+ + G+L+ L + + E + + ++ K D L+
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKTPEDLYK---DFLT 146
Query: 923 YLHNDCFP-------------PIVYRDISSKNVLLDLEYEAHVSDFGISKSL--KPDSSN 967
H C+ ++RD++++N+LL + + DFG+++ + PD
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 968 WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDR 1026
+ + ++APE + T +SDV+SFGVL E G P + R
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV----KIDEEFCR 262
Query: 1027 TLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
L E R+ AP + + + + C P RPT ++ + L
Sbjct: 263 RLKE--GTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 802 VRATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFH-SPLLSEMTCQQEFLNEVKSL 859
+R T F E +G+G V+ + +G++ A+K SP + + + NE+ L
Sbjct: 7 IRKTFIFME--VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLE----NEIAVL 60
Query: 860 TEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSL-AMILSNATSAEELGWTQRMNVIKGVA 918
+I+H NIV H ++V + + G L IL E+ VI+ V
Sbjct: 61 KKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEK----DASLVIQQVL 116
Query: 919 DALSYLHNDCFPPIVYRDISSKNVLL---DLEYEAHVSDFGISKSLKPDSSNWTELAGTI 975
A+ YLH + IV+RD+ +N+L + + ++DFG+SK + + GT
Sbjct: 117 SAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMSTACGTP 171
Query: 976 GYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
GYVAPE+ ++ D +S GV+ + G P
Sbjct: 172 GYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The Inhibited
State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+ FD +GTG G V + SG A+K + ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK + ++V EY+ G + L E + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYL 157
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ ++YRD+ +N+L+D + V+DFG +K +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + D ++ GVL E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 35/249 (14%)
Query: 843 LSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----- 897
LS++ + E + + +H+NI+ G C+ +++ Y G+L L
Sbjct: 84 LSDLVSEMEMMKMIG-----KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPP 138
Query: 898 --------NATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYE 949
N E++ + ++ +A + YL + ++RD++++NVL+
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNV 195
Query: 950 AHVSDFGISKSLKPDSSNWTELAG--TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK- 1006
++DFG+++ + G + ++APE + T +SDV+SFGVL E
Sbjct: 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
Query: 1007 GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRP 1066
G P I L + L E R+ P+ N ++L +M C P RP
Sbjct: 256 GGSPYPGIP-----VEELFKLLKE--GHRMDKPA-NCTNELYMMMR---DCWHAVPSQRP 304
Query: 1067 TMQKVSQLL 1075
T +++ + L
Sbjct: 305 TFKQLVEDL 313
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+ FD +GTG G V + SG A+K + ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK + ++V EY+ G + L E + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYL 157
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ ++YRD+ +N+L+D + V+DFG +K +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + D ++ GVL E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+ FD +GTG G V + SG A+K + ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK + ++V EY+ G + L E + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYL 157
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ ++YRD+ +N+L+D + V+DFG +K +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + D ++ GVL E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+ FD +GTG G V + SG A+K + ++ + LNE + L +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK + ++V EY+ G + L E + YL
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYL 152
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ ++YRD+ +N+L+D + V+DFG +K +K W L GT Y+APE+
Sbjct: 153 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 206
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + D ++ GVL E G P
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 814 IGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G G V R ++ +G+ A K ++ LS Q+ E + ++H NIV+ +
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARD-HQKLEREARICRLLKHPNIVRLHD 88
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
S H +++++ + G L + + E + I+ + +A+ + H +
Sbjct: 89 SISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGV 142
Query: 933 VYRDISSKNVLLDLEYEA---HVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVT 989
V+RD+ +N+LL + + ++DFG++ ++ + W AGT GY++PE+
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYG 202
Query: 990 EKSDVYSFGVLALEAIKGKHP 1010
+ D+++ GV+ + G P
Sbjct: 203 KPVDLWACGVILYILLVGYPP 223
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 812 HCIGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
+G GG G V+ ++ ++G++ A KK + L + Q + E K L ++ R IV
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 871 -YGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVI--KGVADALSYLHND 927
Y F + +V + G + + N + G+ + + + L +LH
Sbjct: 251 AYAFETKTDLC-LVMTIMNGGDIRYHIYN-VDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMK 987
I+YRD+ +NVLLD + +SD G++ LK + AGT G++APEL +
Sbjct: 309 ---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE 365
Query: 988 VTEKSDVYSFGVLALEAIKGKHP 1010
D ++ GV E I + P
Sbjct: 366 YDFSVDYFALGVTLYEMIAARGP 388
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+ F+ IGTG G V + + +G A+K + ++ + LNE + L +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK + ++V EY+ G + S+ + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ ++YRD+ +N+L+D + V+DFG +K +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + D ++ GVL E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
+G+G GSV Y A L + VAVKK P S + ++ + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 92
Query: 871 YGFCSHARHSFIVYE-YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
+ A E YL + L+N ++ L ++ + L Y+H+
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG- 151
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKV 988
I++RD+ NV ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 152 --IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV---ATRWYRAPEIMLNWMHY 206
Query: 989 TEKSDVYSFGVLALEAIKGK 1008
+ D++S G + E ++GK
Sbjct: 207 NQTVDIWSVGCIMAELLQGK 226
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 835 VKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 894
+KK S ++E EV L ++ H N++ + + ++ E + G L
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFD 104
Query: 895 ILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNV-LLDLEYE-AHV 952
L+ S E + + IK + D ++YLH I + D+ +N+ LLD H+
Sbjct: 105 FLAQKESLSE---EEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHI 158
Query: 953 S--DFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
DFG++ ++ D + + GT +VAPE+ + ++D++S GV+ + G P
Sbjct: 159 KLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 1011 ------RDFISSICSTSSNLD 1025
++ +++I S S + D
Sbjct: 218 FLGDTKQETLANITSVSYDFD 238
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 835 VKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 894
+KK S ++E EV L ++ H N++ + + ++ E + G L
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFD 104
Query: 895 ILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNV-LLDLEYE-AHV 952
L+ S E + + IK + D ++YLH I + D+ +N+ LLD H+
Sbjct: 105 FLAQKESLSE---EEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHI 158
Query: 953 S--DFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
DFG++ ++ D + + GT +VAPE+ + ++D++S GV+ + G P
Sbjct: 159 KLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 1011 ------RDFISSICSTSSNLD 1025
++ +++I S S + D
Sbjct: 218 FLGDTKQETLANITSVSYDFD 238
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 99/200 (49%), Gaps = 12/200 (6%)
Query: 805 TNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIR 863
++++D + +G G V R ++G A K ++ LS Q+ E + +++
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-LEREARICRKLQ 86
Query: 864 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSY 923
H NIV+ + ++V++ + G L + + E + I+ + ++++Y
Sbjct: 87 HPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAY 143
Query: 924 LHNDCFPPIVYRDISSKNVLLDLEYEA---HVSDFGISKSLKPDSSNWTELAGTIGYVAP 980
H++ IV+R++ +N+LL + + ++DFG++ + DS W AGT GY++P
Sbjct: 144 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSP 199
Query: 981 ELAYTMKVTEKSDVYSFGVL 1000
E+ ++ D+++ GV+
Sbjct: 200 EVLKKDPYSKPVDIWACGVI 219
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/185 (30%), Positives = 84/185 (45%), Gaps = 2/185 (1%)
Query: 209 MYLYNNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNS-LSGS 267
++L+ N +S + + ++L+ L L N L+G + L L LDL DN+ L
Sbjct: 36 IFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVV 95
Query: 268 IPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLT 327
P +F L +L L+L L P L +L L L N L ++ +L LT
Sbjct: 96 DPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLT 155
Query: 328 ILYLSDNLLFGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGS 387
L+L N + L L L L N ++ PH+ +L L TLYLF N LS
Sbjct: 156 HLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS-M 214
Query: 388 IPSEI 392
+P+E+
Sbjct: 215 LPAEV 219
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 3/198 (1%)
Query: 115 LRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTN-QFSGRIP 173
L N+I + + + L L L SN+ +G L++L+ L LS N Q P
Sbjct: 38 LHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDP 97
Query: 174 PQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSEIGNLKSLSGL 233
L +L LHL GL P L L +YL +N+L + +L +L+ L
Sbjct: 98 TTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHL 157
Query: 234 ELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIP 293
L N++ + L +L L LH N ++ P +F +L L L L N+LS +P
Sbjct: 158 FLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS-MLP 216
Query: 294 SE-MGNLKSLYGLGLSFN 310
+E + L+SL L L+ N
Sbjct: 217 AEVLVPLRSLQYLRLNDN 234
Score = 39.3 bits (90), Expect = 0.013, Method: Composition-based stats.
Identities = 55/186 (29%), Positives = 74/186 (39%), Gaps = 4/186 (2%)
Query: 415 SFGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYN-QLQGPIP-DLRNLTRLARV 472
SF + N+ +L ++SNAL+G + L L L LS N QL+ P R L L +
Sbjct: 50 SFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTL 109
Query: 473 RLDRNHLTGNISESFGIHSNLSYINLSHKKFYGEISFDWGKFPNLGTLDVSANNITGILP 532
LDR L F + L Y+ L + NL L + N I +
Sbjct: 110 HLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPE 169
Query: 533 PEIGDSPQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTE-LGSLIQLEH 591
L L L NH+ P L L+ L L N S LP E L L L++
Sbjct: 170 HAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS-MLPAEVLVPLRSLQY 228
Query: 592 LDLSSN 597
L L+ N
Sbjct: 229 LRLNDN 234
Score = 38.1 bits (87), Expect = 0.030, Method: Composition-based stats.
Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 26/205 (12%)
Query: 51 HNNKGSFLPSWTLNNATKISPCAWFGIHCNHAGKVNSINLTSAGLIGTLHDFS------- 103
H N+ S++P+ + + ++ W +H N +++ T L+ L D S
Sbjct: 39 HGNRISYVPAASFQSCRNLT-ILW--LHSNALAGIDAAAFTGLTLLEQL-DLSDNAQLRV 94
Query: 104 -----FSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSML 158
F HL L L + + P + L+YL L N+ +L L
Sbjct: 95 VDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNL 154
Query: 159 KILYLSTNQFSGRIPPQIGH----LSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNN 214
L+L N RIP H L L L L +N ++ P + +L L +YL+ N
Sbjct: 155 THLFLHGN----RIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFAN 210
Query: 215 SLSGSIPSEI-GNLKSLSGLELGYN 238
+LS +P+E+ L+SL L L N
Sbjct: 211 NLS-MLPAEVLVPLRSLQYLRLNDN 234
Score = 32.7 bits (73), Expect = 1.00, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 1/130 (0%)
Query: 567 KLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNN-QFSG 625
++ L+ N+ S S L L L SN L+ + L L L+LS+N Q
Sbjct: 35 RIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRV 94
Query: 626 EIPIKLEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCFKEMHGL 685
P HL L L L E P + +L+ L L NNL F+++ L
Sbjct: 95 VDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNL 154
Query: 686 VYIDISYNKL 695
++ + N++
Sbjct: 155 THLFLHGNRI 164
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 125/299 (41%), Gaps = 30/299 (10%)
Query: 413 PYSFGNLTNMIVLSIYSNALSGAIPKE--YGNLVKLTLLVLSYNQLQGPI--PDLRNLTR 468
P +F L ++ L +Y LS A+ K+ + NL LT L LS NQ++ P L
Sbjct: 90 PDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNS 149
Query: 469 LARVRLDRNHLTGNISESFG--IHSNLSYINLSHKKFYGEISFDWGKFPN------LGTL 520
L + N + LS+ +L+ Y +S DWGK N L L
Sbjct: 150 LKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEIL 209
Query: 521 DVSAN----NITGILPPEIGDSPQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFS 576
DVS N +ITG I S ++ ++HI+G G IK ++N F+
Sbjct: 210 DVSGNGWTVDITGNFSNAISKSQAFSLI--LAHHIMGA-----GFGFHNIK-DPDQNTFA 261
Query: 577 GQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIH 636
G + + HLDLS + + L L LNL+ N+ + +
Sbjct: 262 GLARSSV------RHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDN 315
Query: 637 LSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCFKEMHGLVYIDISYNKL 695
L L+LS+N LGE S + + ++L N+++ + FK + L +D+ N L
Sbjct: 316 LQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNAL 374
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 114/264 (43%), Gaps = 56/264 (21%)
Query: 64 NNATKISPCAWFGIHCNHAGKVNSINLTSAGLIGTLHDFSFSSFPHLAYLDLRVNQIFGI 123
N KI+ A++G+ + +NL S L+G L+ +F P +AY+DL+ N I I
Sbjct: 300 NKINKIADEAFYGL-----DNLQVLNL-SYNLLGELYSSNFYGLPKVAYIDLQKNHIAII 353
Query: 124 IPSQIANNSKLKYLDLSSNS-----FSGTIP------------PQIG------------- 153
KL+ LDL N+ F +IP P+I
Sbjct: 354 QDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRL 413
Query: 154 -NLSM---------LKILYLSTNQFSGRIPPQI-GHLSYLKALHLFENGLSGSIPPSLG- 201
NL + L+IL L+ N+FS Q L+ L L EN L + L
Sbjct: 414 ENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCW 473
Query: 202 ----NLTNLAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLP-NLAT 256
L++L ++YL +N L+ P +L +L GL L N+L+ LS +LP NL
Sbjct: 474 DVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLT---VLSHNDLPANLEI 530
Query: 257 LDLHDNSLSGSIPLSFGNLTNLDI 280
LD+ N L P F +L+ LDI
Sbjct: 531 LDISRNQLLAPNPDVFVSLSVLDI 554
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 29/227 (12%)
Query: 512 GKFPNLGTL---DVSANNITGI-LPPEIGDSPQLKVLDLSSNHIVGEIPSELGKL--RSL 565
G F NL L D+S N I + L P G LK +D SSN I EL L ++L
Sbjct: 117 GYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTL 176
Query: 566 IKLTLNRNQFSGQLPTELGSLIQ------LEHLDLSSNRLSNSIPGSLGNLV---KLYYL 616
+L N ++ + G + LE LD+S N + I G+ N + + + L
Sbjct: 177 SFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSL 236
Query: 617 NLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIP 676
L+++ F ++ D D + F G + S+ L+L+H +
Sbjct: 237 ILAHHIMGAGF-----GFHNIKDPD-QNTFAG-------LARSSVRHLDLSHGFVFSLNS 283
Query: 677 RCFKEMHGLVYIDISYNKLHGPIPNSAAFKHAPMEALQGNKGLCGDI 723
R F+ + L ++++YNK++ I + A + ++ L + L G++
Sbjct: 284 RVFETLKDLKVLNLAYNKIN-KIADEAFYGLDNLQVLNLSYNLLGEL 329
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 131/316 (41%), Gaps = 51/316 (16%)
Query: 416 FGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQGPI--PDLRNLTRLARVR 473
F L ++ VL++ N ++ + + L L +L LSYN L G + + L ++A +
Sbjct: 286 FETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLL-GELYSSNFYGLPKVAYID 344
Query: 474 LDRNHLTGNISESFGIHSNLSYINLSHKKFYGEISFDWGKFPNLGTLDVSANNITGILPP 533
L +NH+ ++F L ++L I F P++ + +S N + + P
Sbjct: 345 LQKNHIAIIQDQTFKFLEKLQTLDLRDNAL-TTIHF----IPSIPDIFLSGNKLVTL--P 397
Query: 534 EIGDSPQLKVLDLSSNHIVG-EIPSELGKLRSLIKLTLNRNQFSG----QLPTELGSLIQ 588
+I + L + LS N + +I L ++ L L LN+N+FS Q P+E SL
Sbjct: 398 KINLTANL--IHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSL-- 453
Query: 589 LEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLG 648
E L L N L + L V E HL L L+HN+L
Sbjct: 454 -EQLFLGENMLQLAWETELCWDV-------------------FEGLSHLQVLYLNHNYLN 493
Query: 649 EEIPSQVCSMQSLEKLNLAHNNLSGF----IPRCFKEMHGLVYIDISYNKLHGPIPNSAA 704
P + +L L+L N L+ +P L +DIS N+L P P+
Sbjct: 494 SLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPA------NLEILDISRNQLLAPNPD--V 545
Query: 705 FKHAPMEALQGNKGLC 720
F + + NK +C
Sbjct: 546 FVSLSVLDITHNKFIC 561
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 136/344 (39%), Gaps = 70/344 (20%)
Query: 138 DLSSNSFSGTIPPQIGNLSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIP 197
D N+F+G + +L + S N R+ L LK L+L N ++
Sbjct: 254 DPDQNTFAGLARSSVRHLDLSHGFVFSLN---SRV---FETLKDLKVLNLAYNKINKIAD 307
Query: 198 PSLGNLTNLAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATL 257
+ L NL ++ L N L S L ++ ++L N ++ + L L TL
Sbjct: 308 EAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTL 367
Query: 258 DLHDNSLSG-----SIP---LSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSF 309
DL DN+L+ SIP LS L L +NL N + S + + NL LY L
Sbjct: 368 DLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLS-ENRLENLDILYFLL--- 423
Query: 310 NKLSGSIPSSLGNLTKLTILYLSDNLLFGSI-----PCEIGNLRYLFYLELGDNKLSGSI 364
+P L IL L+ N F S P E +L LF LG+N L +
Sbjct: 424 -----RVP-------HLQILILNQNR-FSSCSGDQTPSENPSLEQLF---LGENMLQLAW 467
Query: 365 PHSLG-----NLTNLATLYLFTNLLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPYSFGNL 419
L L++L LYL N L+ S+P P F +L
Sbjct: 468 ETELCWDVFEGLSHLQVLYLNHNYLN-SLP-----------------------PGVFSHL 503
Query: 420 TNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQGPIPDL 463
T + LS+ SN L+ + L +L +S NQL P PD+
Sbjct: 504 TALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV 545
Score = 29.6 bits (65), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 113/293 (38%), Gaps = 33/293 (11%)
Query: 97 GTLHDFSFSSFPHLAYLDLRVNQIFGII--PSQIANNSKLKYLDLSSNSFSGTIPPQIGN 154
L D F + L LDL NQI + PS NS LK +D SSN ++
Sbjct: 112 AVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNS-LKSIDFSSNQIFLVCEHELEP 170
Query: 155 LS--MLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLY 212
L L L+ N R+ G K ++ F N + + S GN + I +
Sbjct: 171 LQGKTLSFFSLAANSLYSRVSVDWG-----KCMNPFRNMVLEILDVS-GNGWTVDITGNF 224
Query: 213 NNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSF 272
+N++S S + + G G++ + D N+ +G L+
Sbjct: 225 SNAISKSQAFSLILAHHIMGAGFGFHNIK----------------DPDQNTFAG---LAR 265
Query: 273 GNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLS 332
++ +LD L H + LK L L L++NK++ + L L +L LS
Sbjct: 266 SSVRHLD---LSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLS 322
Query: 333 DNLLFGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLS 385
NLL L + Y++L N ++ + L L TL L N L+
Sbjct: 323 YNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALT 375
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 14/200 (7%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
+G+G GSV Y A L + VAVKK P S + ++ + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 92
Query: 871 YGFCSHARHSFIVYE-YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
+ A E YL + L+N + L ++ + L Y+H+
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS--- 149
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKV 988
I++RD+ NV ++ + E + DFG+++ + + + T Y APE+ M
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV---ATRWYRAPEIMLNWMHY 206
Query: 989 TEKSDVYSFGVLALEAIKGK 1008
+ D++S G + E ++GK
Sbjct: 207 NQTVDIWSVGCIMAELLQGK 226
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic
Subunit In Complex With H89 Protein Kinase Inhibitor
N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic
Subunit In Complex With H7 Protein Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic
Subunit In Complex With H8 Protein Kinase Inhibitor
[n-(2-Methylamino)ethyl]-5- Isoquinolinesulfonamide
Length = 350
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 94/229 (41%), Gaps = 13/229 (5%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA----ELSSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R + +G A+K
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ 77
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + +VK + ++V EY+ G + S+
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRR 134
Query: 902 AEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL 961
+ YLH+ ++YRD+ +N+L+D + V+DFG +K +
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 962 KPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 192 K--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/285 (23%), Positives = 118/285 (41%), Gaps = 41/285 (14%)
Query: 814 IGTGGQGSVYRAE------LSSGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTEI-R 863
+G G G V A+ ++ VAVK +L E E ++E+K L I
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVK-----MLKEGATHSEHRALMSELKILIHIGH 89
Query: 864 HRNIVKFYGFCSHARHSF-IVYEYLEMGSLAMILSNATS---------AEELGWTQRMNV 913
H N+V G C+ ++ E+ + G+L+ L + + + L +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 914 IKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL--KPDSSNWTEL 971
VA + +L + ++RD++++N+LL + + DFG+++ + PD +
Sbjct: 150 SFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 972 AGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDE 1030
+ ++APE + T +SDV+SFGVL E G P + R L E
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV----KIDEEFXRRLKE 262
Query: 1031 ILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
R+ AP + + + + C P RPT ++ + L
Sbjct: 263 --GTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 835 VKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 894
+KK S ++E EV L ++ H N++ + + ++ E + G L
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFD 104
Query: 895 ILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNV-LLDLEYE-AHV 952
L+ S E + + IK + D ++YLH I + D+ +N+ LLD H+
Sbjct: 105 FLAQKESLSE---EEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHI 158
Query: 953 S--DFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
DFG++ ++ D + + GT +VAPE+ + ++D++S GV+ + G P
Sbjct: 159 KLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 1011 ------RDFISSICSTSSNLD 1025
++ +++I S S + D
Sbjct: 218 FLGDTKQETLANITSVSYDFD 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 13/229 (5%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAEL----SSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R L +G A+K
Sbjct: 11 FLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ 70
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + +VK + ++V EY+ G + S+
Sbjct: 71 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---FSHLRR 127
Query: 902 AEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL 961
+ YLH+ ++YRD+ +N+L+D + V+DFG +K +
Sbjct: 128 IGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
Query: 962 KPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 185 K--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 13/229 (5%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAEL----SSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R L +G A+K
Sbjct: 19 FLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ 78
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + +VK + ++V EY+ G + S+
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---FSHLRR 135
Query: 902 AEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL 961
+ YLH+ ++YRD+ +N+L+D + V+DFG +K +
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Query: 962 KPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 193 K--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A Small
Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 13/229 (5%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAEL----SSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R L +G A+K
Sbjct: 19 FLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ 78
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + +VK + ++V EY+ G + S+
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---FSHLRR 135
Query: 902 AEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL 961
+ YLH+ ++YRD+ +N+L+D + V+DFG +K +
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Query: 962 KPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 193 K--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 13/229 (5%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAEL----SSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R L +G A+K
Sbjct: 19 FLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ 78
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + +VK + ++V EY+ G + S+
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---FSHLRR 135
Query: 902 AEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL 961
+ YLH+ ++YRD+ +N+L+D + V+DFG +K +
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Query: 962 KPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 193 K--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1012
Length = 351
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 94/229 (41%), Gaps = 13/229 (5%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA----ELSSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R + +G A+K
Sbjct: 19 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ 78
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + +VK + ++V EY+ G + S+
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---FSHLRR 135
Query: 902 AEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL 961
+ YLH+ ++YRD+ +N+L+D + V+DFG +K +
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Query: 962 KPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 193 K--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 94/229 (41%), Gaps = 13/229 (5%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA----ELSSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R + +G A+K
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ 77
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + +VK + ++V EY+ G + S+
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---FSHLRR 134
Query: 902 AEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL 961
+ YLH+ ++YRD+ +N+L+D + V+DFG +K +
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 962 KPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 192 K--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 94/229 (41%), Gaps = 13/229 (5%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA----ELSSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R + +G A+K
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ 77
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + +VK + ++V EY+ G + S+
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---FSHLRR 134
Query: 902 AEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL 961
+ YLH+ ++YRD+ +N+L+D + V+DFG +K +
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 962 KPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 192 K--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase (Pka)
In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 94/229 (41%), Gaps = 13/229 (5%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA----ELSSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R + +G A+K
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ 77
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + +VK + ++V EY+ G + S+
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---FSHLRR 134
Query: 902 AEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL 961
+ YLH+ ++YRD+ +N+L+D + V+DFG +K +
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 962 KPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 192 K--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+ FD +GTG G V + SG A+K + ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK + ++V EY+ G + S+ + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ ++YRD+ +N+++D + V+DFG +K +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIII 211
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + D ++ GVL E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 19/215 (8%)
Query: 807 DFDEEHCIGTGGQGSVYRAELSSG----EIVAVKKFH-SPLLSEMTCQQEFLNEVKSLTE 861
+F+ +GTG G V+ SG ++ A+K + ++ + + E + L
Sbjct: 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 114
Query: 862 IRHRN--IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKG-VA 918
IR + Y F + + I+ +Y+ G L LS E + + G +
Sbjct: 115 IRQSPFLVTLHYAFQTETKLHLIL-DYINGGELFTHLSQRERFTE----HEVQIYVGEIV 169
Query: 919 DALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT-ELAGTIGY 977
AL +LH I+YRDI +N+LLD ++DFG+SK D + + GTI Y
Sbjct: 170 LALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEY 226
Query: 978 VAPELAYTMKVTEKS--DVYSFGVLALEAIKGKHP 1010
+AP++ D +S GVL E + G P
Sbjct: 227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 932 IVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEK 991
I+YRD+ NV+LD E ++DFG+ K D GT Y+APE+ +
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 522
Query: 992 SDVYSFGVLALEAIKGKHP 1010
D ++FGVL E + G+ P
Sbjct: 523 VDWWAFGVLLYEMLAGQAP 541
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein
Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+ FD +GTG G V + SG A+K + ++ + LNE + L +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK + ++V EY+ G + L E + YL
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYL 178
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ ++YRD+ +N+L+D + V+DFG +K +K W L GT Y+APE+
Sbjct: 179 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 232
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + D ++ GVL E G P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein
Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein
Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+ FD +GTG G V + SG A+K + ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK + ++V EY+ G + S+ + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ ++YRD+ +N+L+D + V+DFG +K +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + D ++ GVL + G P
Sbjct: 212 SKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV A + +G VAVKK P S + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ AR S + YL + L+N ++L +I + L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYT-MKVT 989
I++RD+ N+ ++ + E + FG+++ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYN 201
Query: 990 EKSDVYSFGVLALEAIKGK 1008
+ D++S G + E + G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta
Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C Beta
Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 932 IVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEK 991
I+YRD+ NV+LD E ++DFG+ K D GT Y+APE+ +
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 201
Query: 992 SDVYSFGVLALEAIKGKHP 1010
D ++FGVL E + G+ P
Sbjct: 202 VDWWAFGVLLYEMLAGQAP 220
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 13/229 (5%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAEL----SSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R L +G A+K
Sbjct: 11 FLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ 70
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + +VK + ++V EY+ G + L
Sbjct: 71 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 130
Query: 902 AEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL 961
E + YLH+ ++YRD+ +N+L+D + V+DFG +K +
Sbjct: 131 FXE---PHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
Query: 962 KPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 185 K--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
++E EV L EIRH NI+ + + ++ E + G L L+ S E T
Sbjct: 59 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 118
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNV-LLDLEY---EAHVSDFGISKSLKPD 964
Q +K + D + YLH+ I + D+ +N+ LLD + DFGI+ ++
Sbjct: 119 Q---FLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA- 171
Query: 965 SSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + + GT +VAPE+ + ++D++S GV+ + G P
Sbjct: 172 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 13/229 (5%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA----ELSSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R + +G A+K
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ 77
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + +VK + ++V EY+ G + L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 137
Query: 902 AEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL 961
E + YLH+ ++YRD+ +N+L+D + V+DFG +K +
Sbjct: 138 FXE---PHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 962 KPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 192 K--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective Inhibitor
Length = 350
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 13/229 (5%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA----ELSSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R + +G A+K
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ 77
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + +VK + ++V EY+ G + L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 137
Query: 902 AEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL 961
E + YLH+ ++YRD+ +N+L+D + V+DFG +K +
Sbjct: 138 FXE---PHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Query: 962 KPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 192 K--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3
(Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3
(Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
++E EV L EIRH NI+ + + ++ E + G L L+ S E T
Sbjct: 52 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 111
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNV-LLDLEY---EAHVSDFGISKSLKPD 964
Q +K + D + YLH+ I + D+ +N+ LLD + DFGI+ ++
Sbjct: 112 Q---FLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA- 164
Query: 965 SSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + + GT +VAPE+ + ++D++S GV+ + G P
Sbjct: 165 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A-
443654
Length = 351
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 13/229 (5%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA----ELSSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R + +G A+K
Sbjct: 19 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ 78
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + +VK + ++V EY+ G + L
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 138
Query: 902 AEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL 961
E + YLH+ ++YRD+ +N+L+D + V+DFG +K +
Sbjct: 139 FXE---PHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Query: 962 KPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 193 K--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 11/161 (6%)
Query: 853 LNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMN 912
L EV+ L ++ H NI+K + + +IV E G L +
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL---FDEIIKRKRFSEHDAAR 125
Query: 913 VIKGVADALSYLHNDCFPPIVYRDISSKNVLL---DLEYEAHVSDFGISKSLKPDSSNWT 969
+IK V ++Y+H IV+RD+ +N+LL + + + + DFG+S + ++
Sbjct: 126 IIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMK 181
Query: 970 ELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ GT Y+APE+ EK DV+S GV+ + G P
Sbjct: 182 DRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 11/161 (6%)
Query: 853 LNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMN 912
L EV+ L ++ H NI+K + + +IV E G L +
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL---FDEIIKRKRFSEHDAAR 125
Query: 913 VIKGVADALSYLHNDCFPPIVYRDISSKNVLL---DLEYEAHVSDFGISKSLKPDSSNWT 969
+IK V ++Y+H IV+RD+ +N+LL + + + + DFG+S + ++
Sbjct: 126 IIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMK 181
Query: 970 ELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ GT Y+APE+ EK DV+S GV+ + G P
Sbjct: 182 DRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/212 (22%), Positives = 98/212 (46%), Gaps = 11/212 (5%)
Query: 803 RATNDFDEEHCIGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
R T+D+ +G G V R + + + A K ++ LS Q+ E +
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARD-HQKLEREARICRL 86
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
++H NIV+ + S ++V++ + G L + + E + I + +++
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIHQILESV 143
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEA---HVSDFGISKSLKPDSSNWTELAGTIGYV 978
+++H IV+RD+ +N+LL + + ++DFG++ ++ + W AGT GY+
Sbjct: 144 NHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYL 200
Query: 979 APELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+PE+ + D+++ GV+ + G P
Sbjct: 201 SPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
++E EV L EIRH NI+ + + ++ E + G L L+ S E T
Sbjct: 73 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 132
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNV-LLDLEY---EAHVSDFGISKSLKPD 964
Q +K + D + YLH+ I + D+ +N+ LLD + DFGI+ ++
Sbjct: 133 Q---FLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA- 185
Query: 965 SSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + + GT +VAPE+ + ++D++S GV+ + G P
Sbjct: 186 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 835 VKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 894
+KK S ++E EV L ++ H N++ + + ++ E + G L
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFD 104
Query: 895 ILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNV-LLDLEYE-AHV 952
L+ S E + + IK + D ++YLH I + D+ +N+ LLD H+
Sbjct: 105 FLAQKESLSE---EEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHI 158
Query: 953 S--DFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
DFG++ ++ D + + GT +VAPE+ + ++D++S GV+ + G P
Sbjct: 159 KLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 1011 ------RDFISSICSTSSNLD 1025
++ +++I + S + D
Sbjct: 218 FLGDTKQETLANITAVSYDFD 238
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 835 VKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 894
+KK S ++E EV L ++ H N++ + + ++ E + G L
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFD 104
Query: 895 ILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNV-LLDLEYE-AHV 952
L+ S E + + IK + D ++YLH I + D+ +N+ LLD H+
Sbjct: 105 FLAQKESLSE---EEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHI 158
Query: 953 S--DFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
DFG++ ++ D + + GT +VAPE+ + ++D++S GV+ + G P
Sbjct: 159 KLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 1011 ------RDFISSICSTSSNLD 1025
++ +++I + S + D
Sbjct: 218 FLGDTKQETLANITAVSYDFD 238
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 55/184 (29%), Positives = 82/184 (44%), Gaps = 2/184 (1%)
Query: 209 MYLYNNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSI 268
++L+ N +S + ++L+ L L N L+ + L L LDL DN+ S+
Sbjct: 37 IFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSV 96
Query: 269 -PLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLT 327
P +F L L L+L L P L +L L L N L + +L LT
Sbjct: 97 DPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLT 156
Query: 328 ILYLSDNLLFGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGS 387
L+L N + L L L L N+++ PH+ +L L TLYLF N LS +
Sbjct: 157 HLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-A 215
Query: 388 IPSE 391
+P+E
Sbjct: 216 LPTE 219
Score = 49.7 bits (117), Expect = 1e-05, Method: Composition-based stats.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 3/198 (1%)
Query: 115 LRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTNQFSGRIPP 174
L N+I + + L L L SN + L++L+ L LS N + P
Sbjct: 39 LHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDP 98
Query: 175 QIGH-LSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSEIGNLKSLSGL 233
H L L LHL GL P L L +YL +N+L +L +L+ L
Sbjct: 99 ATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHL 158
Query: 234 ELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIP 293
L N++S + L +L L LH N ++ P +F +L L L L N+LS ++P
Sbjct: 159 FLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-ALP 217
Query: 294 SE-MGNLKSLYGLGLSFN 310
+E + L++L L L+ N
Sbjct: 218 TEALAPLRALQYLRLNDN 235
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 53/178 (29%), Positives = 74/178 (41%), Gaps = 1/178 (0%)
Query: 158 LKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSI-PPSLGNLTNLAIMYLYNNSL 216
L IL+L +N + L+ L+ L L +N S+ P + L L ++L L
Sbjct: 58 LTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGL 117
Query: 217 SGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLT 276
P L +L L L N L + +L NL L LH N +S +F L
Sbjct: 118 QELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLH 177
Query: 277 NLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDN 334
+LD L L N ++ P +L L L L N LS +L L L L L+DN
Sbjct: 178 SLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 62/147 (42%), Gaps = 2/147 (1%)
Query: 213 NNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSF 272
N L P+ L L L L L P L L L L DN+L +F
Sbjct: 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTF 149
Query: 273 GNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLS 332
+L NL L L N +S L SL L L N+++ P + +L +L LYL
Sbjct: 150 RDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLF 209
Query: 333 DNLLFGSIPCE-IGNLRYLFYLELGDN 358
N L ++P E + LR L YL L DN
Sbjct: 210 ANNL-SALPTEALAPLRALQYLRLNDN 235
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 55/184 (29%), Positives = 82/184 (44%), Gaps = 2/184 (1%)
Query: 209 MYLYNNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSI 268
++L+ N +S + ++L+ L L N L+ + L L LDL DN+ S+
Sbjct: 36 IFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSV 95
Query: 269 -PLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLT 327
P +F L L L+L L P L +L L L N L + +L LT
Sbjct: 96 DPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLT 155
Query: 328 ILYLSDNLLFGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGS 387
L+L N + L L L L N+++ PH+ +L L TLYLF N LS +
Sbjct: 156 HLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-A 214
Query: 388 IPSE 391
+P+E
Sbjct: 215 LPTE 218
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 55/179 (30%), Positives = 82/179 (45%), Gaps = 3/179 (1%)
Query: 134 LKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTNQFSGRIPPQIGH-LSYLKALHLFENGL 192
L L L SN + L++L+ L LS N + P H L L LHL GL
Sbjct: 57 LTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGL 116
Query: 193 SGSIPPSLGNLTNLAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLP 252
P L L +YL +N+L +L +L+ L L N++S + L
Sbjct: 117 QELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLH 176
Query: 253 NLATLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSE-MGNLKSLYGLGLSFN 310
+L L LH N ++ P +F +L L L L N+LS ++P+E + L++L L L+ N
Sbjct: 177 SLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-ALPTEALAPLRALQYLRLNDN 234
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 53/178 (29%), Positives = 74/178 (41%), Gaps = 1/178 (0%)
Query: 158 LKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSI-PPSLGNLTNLAIMYLYNNSL 216
L IL+L +N + L+ L+ L L +N S+ P + L L ++L L
Sbjct: 57 LTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGL 116
Query: 217 SGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLT 276
P L +L L L N L + +L NL L LH N +S +F L
Sbjct: 117 QELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLH 176
Query: 277 NLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDN 334
+LD L L N ++ P +L L L L N LS +L L L L L+DN
Sbjct: 177 SLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 62/147 (42%), Gaps = 2/147 (1%)
Query: 213 NNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSF 272
N L P+ L L L L L P L L L L DN+L +F
Sbjct: 89 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTF 148
Query: 273 GNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLS 332
+L NL L L N +S L SL L L N+++ P + +L +L LYL
Sbjct: 149 RDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLF 208
Query: 333 DNLLFGSIPCE-IGNLRYLFYLELGDN 358
N L ++P E + LR L YL L DN
Sbjct: 209 ANNL-SALPTEALAPLRALQYLRLNDN 234
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 17/241 (7%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G G V+R +S + + KF + + T Q E+ L RHRNI+ +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKF---VKVKGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIV 933
+++E++ L + TSA EL + ++ + V +AL +LH+ I
Sbjct: 70 FESMEELVMIFEFIS--GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIG 124
Query: 934 YRDISSKNVLLDLEYEAHVS--DFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEK 991
+ DI +N++ + + +FG ++ LKP N+ L Y APE+ V+
Sbjct: 125 HFDIRPENIIYQTRRSSTIKIIEFGQARQLKP-GDNFRLLFTAPEYYAPEVHQHDVVSTA 183
Query: 992 SDVYSFGVLALEAIKGKHPRDFIS----SICSTSSNLDRTLDEILDPRLPAPSCNIRDKL 1047
+D++S G L + G +P F++ I N + T DE + + + D+L
Sbjct: 184 TDMWSLGTLVYVLLSGINP--FLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRL 241
Query: 1048 I 1048
+
Sbjct: 242 L 242
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N-
Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 31/238 (13%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA----ELSSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R + +G A+K
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ 77
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + +VK + + + + +L M++ A
Sbjct: 78 KVVKLKEIEHTLNEKRILQAVNFPFLVK------------LEFSFKDNSNLYMVMEYAPG 125
Query: 902 AEELGWTQRMNVIK---------GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHV 952
E +R+ + YLH+ ++YRD+ +N+++D + V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQV 182
Query: 953 SDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+DFG++K +K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 183 TDFGLAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 75/168 (44%), Gaps = 32/168 (19%)
Query: 540 QLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRL 599
QL+ LDL++ H+ G +PS + L L KL L+ N F + L HL + N
Sbjct: 276 QLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSLTHLYIRGN-- 332
Query: 600 SNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIPSQVCSMQ 659
VK +L + LEK +L LDLSHN + S CS+Q
Sbjct: 333 -----------VKKLHLGVG----------CLEKLGNLQTLDLSHNDIE---ASDCCSLQ 368
Query: 660 -----SLEKLNLAHNNLSGFIPRCFKEMHGLVYIDISYNKLHGPIPNS 702
L+ LNL+HN G + FKE L +D+++ +LH P S
Sbjct: 369 LKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINAPQS 416
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 134/348 (38%), Gaps = 59/348 (16%)
Query: 92 SAGLIGTLHDFSFSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQ 151
S + T+H+ +FS +L +LDL QI I ++ +L L L+ N
Sbjct: 38 SFNFLPTIHNRTFSRLMNLTFLDLTRCQINWIHEDTFQSHHQLSTLVLTGNPLIFMAETS 97
Query: 152 IGNLSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYL 211
+ LK L+L S + +L L++L+L N +S P NL ++
Sbjct: 98 LNGPKSLKHLFLIQTGISNLEFIPVHNLENLESLYLGSNHISSIKFPKDFPARNLKVLDF 157
Query: 212 YNNSLSGSIPSEIGNLK------------SLSGLELGYNKLSGSMPLSLGNLPNLATL-- 257
NN++ ++ +L+ ++ G+ELG + L+ G PNL+ +
Sbjct: 158 QNNAIHYISREDMRSLEQAINLSLNFNGNNVKGIELGAFDSTIFQSLNFGGTPNLSVIFN 217
Query: 258 ----------------DLHDNSLSGSI-----------------------PLSFGNLTNL 278
D+ D +S ++ +F T L
Sbjct: 218 GLQNSTTQSLWLGTFEDIDDEDISSAMLKGLCEMSVESLNLQEHRFSDISSTTFQCFTQL 277
Query: 279 DILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNL--L 336
L+L L G +PS M L L L LS N S N LT LY+ N+ L
Sbjct: 278 QELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSLTHLYIRGNVKKL 336
Query: 337 FGSIPC--EIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTN 382
+ C ++GNL+ L L D + S L NL++L TL L N
Sbjct: 337 HLGVGCLEKLGNLQTL-DLSHNDIEASDCCSLQLKNLSHLQTLNLSHN 383
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 117/298 (39%), Gaps = 16/298 (5%)
Query: 415 SFGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQL----QGPIPDLRNLTRL- 469
+F T + L + + L G +P L L LVLS N Q + +LT L
Sbjct: 270 TFQCFTQLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSLTHLY 328
Query: 470 ARVRLDRNHLTGNISESFGIHSNLSYINLSHKKFYGE--ISFDWGKFPNLGTLDVSANNI 527
R + + HL E G NL ++LSH S +L TL++S N
Sbjct: 329 IRGNVKKLHLGVGCLEKLG---NLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEP 385
Query: 528 TGILPPEIGDSPQLKVLDLSSNHIVGEIP-SELGKLRSLIKLTLNRNQFSGQLPTELGSL 586
G+ + PQL++LDL+ + P S L L L L L L
Sbjct: 386 LGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHFLQVLNLTYCFLDTSNQHLLAGL 445
Query: 587 IQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHL---SDLDLS 643
L HL+L N + L + L + G + I + F L S +DLS
Sbjct: 446 PVLRHLNLKGNHFQDGTITKTNLLQTVGSLEVLILSSCGLLSIDQQAFHSLGKMSHVDLS 505
Query: 644 HNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCFKEMHGLVYIDISYNKLHGPIPN 701
HN L + + ++ + LNLA N+++ PR + I++S+N L N
Sbjct: 506 HNSLTCDSIDSLSHLKGI-YLNLAANSINIISPRLLPILSQQSTINLSHNPLDCTCSN 562
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 118/279 (42%), Gaps = 12/279 (4%)
Query: 99 LHDFSFSSFPHLAYLDLRVN-QIFGIIPSQIANNSKLKYLDLSSNSF--SGTIPPQIGNL 155
L S ++FP L +L +R N + + + L+ LDLS N S Q+ NL
Sbjct: 313 LCQISAANFPSLTHLYIRGNVKKLHLGVGCLEKLGNLQTLDLSHNDIEASDCCSLQLKNL 372
Query: 156 SMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPS-LGNLTNLAIMYLYNN 214
S L+ L LS N+ G L+ L L L + P S NL L ++ L
Sbjct: 373 SHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHFLQVLNLTYC 432
Query: 215 SLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPL---S 271
L S + L L L L N L + +L++ S G + + +
Sbjct: 433 FLDTSNQHLLAGLPVLRHLNLKGNHFQDGTITKTNLLQTVGSLEVLILSSCGLLSIDQQA 492
Query: 272 FGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYL 331
F +L + ++L HNSL+ + +LK +Y L L+ N ++ P L L++ + + L
Sbjct: 493 FHSLGKMSHVDLSHNSLTCDSIDSLSHLKGIY-LNLAANSINIISPRLLPILSQQSTINL 551
Query: 332 SDNLLFGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGN 370
S N + C N+ +L + + +KL GS + N
Sbjct: 552 SHN----PLDCTCSNIHFLTWYKENLHKLEGSEETTCAN 586
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 79/202 (39%), Gaps = 27/202 (13%)
Query: 134 LKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLS 193
++ L+L + FS + L+ L L+ G +P + L+ LK L L N
Sbjct: 253 VESLNLQEHRFSDISSTTFQCFTQLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHFD 311
Query: 194 GSIPPSLGNLTNLAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPN 253
S N +L +Y+ GN+K L LG L L N
Sbjct: 312 QLCQISAANFPSLTHLYIR------------GNVKKL---HLGVG--------CLEKLGN 348
Query: 254 LATLDLHDNSLSGS--IPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNK 311
L TLDL N + S L NL++L LNL HN G L L L+F +
Sbjct: 349 LQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTR 408
Query: 312 LSGSIPSS-LGNLTKLTILYLS 332
L + P S NL L +L L+
Sbjct: 409 LHINAPQSPFQNLHFLQVLNLT 430
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 67/289 (23%), Positives = 119/289 (41%), Gaps = 49/289 (16%)
Query: 814 IGTGGQGSVYRAE------LSSGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTEI-R 863
+G G G V A+ ++ VAVK +L E E ++E+K L I
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVK-----MLKEGATHSEHRALMSELKILIHIGH 89
Query: 864 HRNIVKFYGFCSHARHSF-IVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H N+V G C+ ++ E+ + G+L+ L + + + ++ K D L+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE----FVPYKDLYK---DFLT 142
Query: 923 YLHNDCFP-------------PIVYRDISSKNVLLDLEYEAHVSDFGISKSL--KPDSSN 967
H C+ ++RD++++N+LL + + DFG+++ + PD
Sbjct: 143 LEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 202
Query: 968 WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDR 1026
+ + ++APE + T +SDV+SFGVL E G P + R
Sbjct: 203 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV----KIDEEFCR 258
Query: 1027 TLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
L E R+ AP + + + + C P RPT ++ + L
Sbjct: 259 RLKE--GTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 66/287 (22%), Positives = 118/287 (41%), Gaps = 43/287 (14%)
Query: 814 IGTGGQGSVYRAE------LSSGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTEI-R 863
+G G G V A+ ++ VAVK +L E E ++E+K L I
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVK-----MLKEGATHSEHRALMSELKILIHIGH 91
Query: 864 HRNIVKFYGFCSHARHSF-IVYEYLEMGSLAMILSNATS-----------AEELGWTQRM 911
H N+V G C+ ++ E+ + G+L+ L + + + L +
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 912 NVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLK--PDSSNWT 969
VA + +L + ++RD++++N+LL + + DFG+++ + PD
Sbjct: 152 XYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 970 ELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTL 1028
+ + ++APE + T +SDV+SFGVL E G P + R L
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV----KIDEEFCRRL 264
Query: 1029 DEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
E R+ AP + + + + C P RPT ++ + L
Sbjct: 265 KE--GTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 109/268 (40%), Gaps = 17/268 (6%)
Query: 69 ISPCAWFGIHCNHAGKVNSINLTSAGLIGTLHDFSFSSFPHLAYLDLRVNQIFGIIPSQI 128
+ P F C+ + + + GL D P A LDL+ N+I I
Sbjct: 21 MGPVCPFRCQCH----LRVVQCSDLGLEKVPKDLP----PDTALLDLQNNKITEIKDGDF 72
Query: 129 ANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLF 188
N L L L +N S P L L+ LYLS NQ +P ++ L+ L +
Sbjct: 73 KNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVH 129
Query: 189 ENGLSGSIPPSLGNLTNLAIMYLYNNSL--SGSIPSEIGNLKSLSGLELGYNKLSGSMPL 246
EN ++ L + ++ L N L SG +K LS + + ++ ++P
Sbjct: 130 ENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQ 188
Query: 247 SLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLG 306
L P+L L L N ++ S L NL L L NS+S + N L L
Sbjct: 189 GLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELH 246
Query: 307 LSFNKLSGSIPSSLGNLTKLTILYLSDN 334
L+ NKL +P L + + ++YL +N
Sbjct: 247 LNNNKLV-KVPGGLADHKYIQVVYLHNN 273
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 92/214 (42%), Gaps = 10/214 (4%)
Query: 415 SFGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQGPIPDLRNLTRLARVRL 474
F NL N+ L + +N +S P + LVKL L LS NQL+ +P+ T L +R+
Sbjct: 71 DFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKMPKT-LQELRV 128
Query: 475 DRNHLTGNISESFGIHSNLSYINLSHKKFYGEISFDWGKFPNLGTLD---VSANNITGIL 531
N +T F + + + L + G F + L ++ NIT I
Sbjct: 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSS-GIENGAFQGMKKLSYIRIADTNITTI- 186
Query: 532 PPEIGDSPQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEH 591
P+ G P L L L N I + L L +L KL L+ N S L + L
Sbjct: 187 -PQ-GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRE 244
Query: 592 LDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSG 625
L L++N+L +PG L + + + L NN S
Sbjct: 245 LHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISA 277
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 592 LDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEI 651
LDL +N+++ G NL L+ L L NN+ S P + L L LS N L +E+
Sbjct: 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL-KEL 115
Query: 652 PSQVCSMQSLEKLNLAHNNLSGFIPRCFKEMHGLVYIDISYNKLHGPIPNSAAFK 706
P ++ ++L++L + N ++ F ++ ++ +++ N L + AF+
Sbjct: 116 PEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQ 168
Score = 37.0 bits (84), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 554 EIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKL 613
++P +L +L L L N+ + + +L L L L +N++S PG+ LVKL
Sbjct: 45 KVPKDLPPDTAL--LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL 102
Query: 614 YYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNL-- 671
L LS NQ E+P K+ K L +L + N + + S + + + L N L
Sbjct: 103 ERLYLSKNQLK-ELPEKMPKT--LQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS 159
Query: 672 SGFIPRCFKEMHGLVYIDIS 691
SG F+ M L YI I+
Sbjct: 160 SGIENGAFQGMKKLSYIRIA 179
Score = 34.3 bits (77), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 280 ILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNLLFGS 339
+L+L +N ++ + NLK+L+ L L NK+S P + L KL LYLS N L
Sbjct: 56 LLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL-KE 114
Query: 340 IPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGS 387
+P ++ + L L + +N+++ L + + L TN L S
Sbjct: 115 LPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSS 160
Score = 34.3 bits (77), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 233 LELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSI 292
L+L NK++ NL NL TL L +N +S P +F L L+ L L N L +
Sbjct: 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-EL 115
Query: 293 PSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNLLFGSIPCEIG---NLRY 349
P +M K+L L + N+++ S L ++ ++ L N L S E G ++
Sbjct: 116 PEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSS-GIENGAFQGMKK 172
Query: 350 LFYLELGD---------------------NKLSGSIPHSLGNLTNLATLYLFTNLLSG 386
L Y+ + D NK++ SL L NLA L L N +S
Sbjct: 173 LSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 230
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 10/206 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+ FD +GTG G V + SG A+K + ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK + ++V EY+ G + S+ + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ ++YRD+ +N+L+D + V+DFG +K +K W L GT Y+AP +
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPAIIL 211
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + D ++ GVL E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 109/268 (40%), Gaps = 17/268 (6%)
Query: 69 ISPCAWFGIHCNHAGKVNSINLTSAGLIGTLHDFSFSSFPHLAYLDLRVNQIFGIIPSQI 128
+ P F C+ + + + GL D P A LDL+ N+I I
Sbjct: 21 MGPVCPFRCQCH----LRVVQCSDLGLEKVPKDLP----PDTALLDLQNNKITEIKDGDF 72
Query: 129 ANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLF 188
N L L L +N S P L L+ LYLS NQ +P ++ L+ L +
Sbjct: 73 KNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVH 129
Query: 189 ENGLSGSIPPSLGNLTNLAIMYLYNNSL--SGSIPSEIGNLKSLSGLELGYNKLSGSMPL 246
EN ++ L + ++ L N L SG +K LS + + ++ ++P
Sbjct: 130 ENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQ 188
Query: 247 SLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLG 306
L P+L L L N ++ S L NL L L NS+S + N L L
Sbjct: 189 GLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELH 246
Query: 307 LSFNKLSGSIPSSLGNLTKLTILYLSDN 334
L+ NKL +P L + + ++YL +N
Sbjct: 247 LNNNKLV-KVPGGLADHKYIQVVYLHNN 273
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 92/214 (42%), Gaps = 10/214 (4%)
Query: 415 SFGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQGPIPDLRNLTRLARVRL 474
F NL N+ L + +N +S P + LVKL L LS NQL+ +P+ T L +R+
Sbjct: 71 DFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKMPKT-LQELRV 128
Query: 475 DRNHLTGNISESFGIHSNLSYINLSHKKFYGEISFDWGKFPNLGTLD---VSANNITGIL 531
N +T F + + + L + G F + L ++ NIT I
Sbjct: 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSS-GIENGAFQGMKKLSYIRIADTNITTI- 186
Query: 532 PPEIGDSPQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEH 591
P+ G P L L L N I + L L +L KL L+ N S L + L
Sbjct: 187 -PQ-GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRE 244
Query: 592 LDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSG 625
L L++N+L +PG L + + + L NN S
Sbjct: 245 LHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISA 277
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 592 LDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEI 651
LDL +N+++ G NL L+ L L NN+ S P + L L LS N L +E+
Sbjct: 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL-KEL 115
Query: 652 PSQVCSMQSLEKLNLAHNNLSGFIPRCFKEMHGLVYIDISYNKLHGPIPNSAAFK 706
P ++ ++L++L + N ++ F ++ ++ +++ N L + AF+
Sbjct: 116 PEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQ 168
Score = 37.0 bits (84), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 554 EIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKL 613
++P +L +L L L N+ + + +L L L L +N++S PG+ LVKL
Sbjct: 45 KVPKDLPPDTAL--LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL 102
Query: 614 YYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNL-- 671
L LS NQ E+P K+ K L +L + N + + S + + + L N L
Sbjct: 103 ERLYLSKNQLK-ELPEKMPKT--LQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS 159
Query: 672 SGFIPRCFKEMHGLVYIDIS 691
SG F+ M L YI I+
Sbjct: 160 SGIENGAFQGMKKLSYIRIA 179
Score = 34.3 bits (77), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 280 ILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNLLFGS 339
+L+L +N ++ + NLK+L+ L L NK+S P + L KL LYLS N L
Sbjct: 56 LLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL-KE 114
Query: 340 IPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGS 387
+P ++ + L L + +N+++ L + + L TN L S
Sbjct: 115 LPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSS 160
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 233 LELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSI 292
L+L NK++ NL NL TL L +N +S P +F L L+ L L N L +
Sbjct: 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-EL 115
Query: 293 PSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNLLFGSIPCEIG---NLRY 349
P +M K+L L + N+++ S L ++ ++ L N L S E G ++
Sbjct: 116 PEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSS-GIENGAFQGMKK 172
Query: 350 LFYLELGD---------------------NKLSGSIPHSLGNLTNLATLYLFTNLLSG 386
L Y+ + D NK++ SL L NLA L L N +S
Sbjct: 173 LSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 230
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 13/229 (5%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAEL----SSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R L +G A+K
Sbjct: 39 FLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ 98
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + +VK + ++V EY+ G + L
Sbjct: 99 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 158
Query: 902 AEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL 961
E + YLH+ ++YRD+ +N+L+D + V+DFG +K +
Sbjct: 159 FSE---PHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Query: 962 KPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 213 K--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 55/238 (23%), Positives = 97/238 (40%), Gaps = 31/238 (13%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA----ELSSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R + +G A+K
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ 77
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + +VK + + + + +L M++ A
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVK------------LEFSFKDNSNLYMVMEYAPG 125
Query: 902 AEELGWTQRMNVIK---------GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHV 952
E +R+ + YLH+ ++YRD+ +N+++D + V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQV 182
Query: 953 SDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+DFG +K +K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 183 TDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 31/238 (13%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA----ELSSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R + +G A+K
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ 77
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + +VK + + + + +L M++ A
Sbjct: 78 KVVKLKEIEHTLNEKRILQAVNFPFLVK------------LEFSFKDNSNLYMVMEYAPG 125
Query: 902 AEELGWTQRMNVIK---------GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHV 952
E +R+ + YLH+ ++YRD+ +N+++D + V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 182
Query: 953 SDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+DFG++K +K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 183 TDFGLAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSP-------LLSEMTCQQEFLNE 855
AT+ ++ IG G G+VY+A + SG VA+K P L T ++ L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL-- 64
Query: 856 VKSLTEIRHRNIVKFYGFCSHARHS-----FIVYEYLEMGSLAMILSNATSAEELGWTQR 910
++ L H N+V+ C+ +R +V+E+++ L L A T +
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK 123
Query: 911 MNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTE 970
++++ L +LH +C IV+RD+ +N+L+ ++DFG+++ + T
Sbjct: 124 -DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LTP 178
Query: 971 LAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGK 1008
+ T+ Y APE+ D++S G + E + K
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 53.5 bits (127), Expect = 7e-07, Method: Composition-based stats.
Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 45/289 (15%)
Query: 814 IGTGGQGSVYRAE------LSSGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTEI-R 863
+G G G V A+ ++ VAVK +L E E ++E+K L I
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVK-----MLKEGATHSEHRALMSELKILIHIGH 80
Query: 864 HRNIVKFYGFCSHARHSF-IVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H N+V G C+ ++ E+ + G+L+ L + + ++ K D L+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK---DFLT 137
Query: 923 YLHNDCFP-------------PIVYRDISSKNVLLDLEYEAHVSDFGISKSLK--PDSSN 967
H C+ ++RD++++N+LL + + DFG+++ + PD
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 968 WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDR 1026
+ + ++APE + T +SDV+SFGVL E G P + R
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV----KIDEEFCR 253
Query: 1027 TLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
L E R+ AP + + + + C P RPT ++ + L
Sbjct: 254 RLKE--GTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 53.5 bits (127), Expect = 7e-07, Method: Composition-based stats.
Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 45/289 (15%)
Query: 814 IGTGGQGSVYRAE------LSSGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTEI-R 863
+G G G V A+ ++ VAVK +L E E ++E+K L I
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVK-----MLKEGATHSEHRALMSELKILIHIGH 89
Query: 864 HRNIVKFYGFCSHARHSF-IVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H N+V G C+ ++ E+ + G+L+ L + + ++ K D L+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK---DFLT 146
Query: 923 YLHNDCFP-------------PIVYRDISSKNVLLDLEYEAHVSDFGISKSL--KPDSSN 967
H C+ ++RD++++N+LL + + DFG+++ + PD
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 968 WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDR 1026
+ + ++APE + T +SDV+SFGVL E G P + R
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV----KIDEEFCR 262
Query: 1027 TLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
L E R+ AP + + + + C P RPT ++ + L
Sbjct: 263 RLKE--GTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m,
Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m,
Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m,
Q181k) With Compound 27
Length = 351
Score = 53.5 bits (127), Expect = 7e-07, Method: Composition-based stats.
Identities = 56/238 (23%), Positives = 97/238 (40%), Gaps = 31/238 (13%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAEL----SSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R L +G A+K
Sbjct: 19 FLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ 78
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + +VK + + + + +L M++ A
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLVK------------LEFSFKDNSNLYMVMEYAPG 126
Query: 902 AEELGWTQRMNVIK---------GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHV 952
E +R+ + YLH+ ++YRD+ +N+++D + V
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 183
Query: 953 SDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+DFG +K +K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 184 TDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 53.5 bits (127), Expect = 7e-07, Method: Composition-based stats.
Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 45/289 (15%)
Query: 814 IGTGGQGSVYRAE------LSSGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTEI-R 863
+G G G V A+ ++ VAVK +L E E ++E+K L I
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVK-----MLKEGATHSEHRALMSELKILIHIGH 89
Query: 864 HRNIVKFYGFCSHARHSF-IVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H N+V G C+ ++ E+ + G+L+ L + + ++ K D L+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK---DFLT 146
Query: 923 YLHNDCFP-------------PIVYRDISSKNVLLDLEYEAHVSDFGISKSL--KPDSSN 967
H C+ ++RD++++N+LL + + DFG+++ + PD
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Query: 968 WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDR 1026
+ + ++APE + T +SDV+SFGVL E G P + R
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV----KIDEEFCR 262
Query: 1027 TLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
L E R+ AP + + + + C P RPT ++ + L
Sbjct: 263 RLKE--GTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 55/238 (23%), Positives = 97/238 (40%), Gaps = 31/238 (13%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA----ELSSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R + +G A+K
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ 77
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + +VK + + + + +L M++ A
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVK------------LEFSFKDNSNLYMVMEYAPG 125
Query: 902 AEELGWTQRMNVIK---------GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHV 952
E +R+ + YLH+ ++YRD+ +N+++D + V
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 182
Query: 953 SDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+DFG +K +K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 183 TDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 67/289 (23%), Positives = 120/289 (41%), Gaps = 45/289 (15%)
Query: 814 IGTGGQGSVYRAE------LSSGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTEI-R 863
+G G G V A+ ++ VAVK +L E E ++E+K L I
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVK-----MLKEGATHSEHRALMSELKILIHIGH 91
Query: 864 HRNIVKFYGFCSHARHSF-IVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H N+V G C+ ++ E+ + G+L+ L + + E + + + + D L+
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKEAPEDL--YKDFLT 148
Query: 923 YLHNDCFP-------------PIVYRDISSKNVLLDLEYEAHVSDFGISKSL--KPDSSN 967
H C+ ++RD++++N+LL + + DFG+++ + PD
Sbjct: 149 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 208
Query: 968 WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDR 1026
+ + ++APE + T +SDV+SFGVL E G P + R
Sbjct: 209 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV----KIDEEFCR 264
Query: 1027 TLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
L E R+ AP + + + + C P RPT ++ + L
Sbjct: 265 RLKE--GTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 68/289 (23%), Positives = 118/289 (40%), Gaps = 45/289 (15%)
Query: 814 IGTGGQGSVYRAE------LSSGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTEI-R 863
+G G G V A+ ++ VAVK +L E E ++E+K L I
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVK-----MLKEGATHSEHRALMSELKILIHIGH 80
Query: 864 HRNIVKFYGFCSHARHSFIVY-EYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H N+V G C+ +V E+ + G+L+ L + + ++ K D L+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK---DFLT 137
Query: 923 YLHNDCFP-------------PIVYRDISSKNVLLDLEYEAHVSDFGISKSLK--PDSSN 967
H C+ ++RD++++N+LL + + DFG+++ + PD
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 968 WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDR 1026
+ + ++APE + T +SDV+SFGVL E G P + R
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV----KIDEEFCR 253
Query: 1027 TLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
L E R+ AP + + + + C P RPT ++ + L
Sbjct: 254 RLKE--GTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase
A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase
A (Pka)
Length = 350
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 55/238 (23%), Positives = 97/238 (40%), Gaps = 31/238 (13%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA----ELSSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R + +G A+K
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ 77
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + +VK + + + + +L M++ A
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVK------------LEFSFKDNSNLYMVMEYAPG 125
Query: 902 AEELGWTQRMNVIK---------GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHV 952
E +R+ + YLH+ ++YRD+ +N+++D + V
Sbjct: 126 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 182
Query: 953 SDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+DFG +K +K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 183 TDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 53.1 bits (126), Expect = 9e-07, Method: Composition-based stats.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 853 LNEVKSLTEIR-HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRM 911
L EV L ++ H NI++ F+V++ ++ G L L+ + E + M
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 912 NVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTEL 971
+ V AL L+ IV+RD+ +N+LLD + ++DFG S L P E+
Sbjct: 131 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLREV 183
Query: 972 AGTIGYVAPEL----------AYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
GT Y+APE+ Y +V D++S GV+ + G P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLLAGSPP 228
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 53.1 bits (126), Expect = 9e-07, Method: Composition-based stats.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 853 LNEVKSLTEIR-HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRM 911
L EV L ++ H NI++ F+V++ ++ G L L+ + E + M
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 117
Query: 912 NVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTEL 971
+ V AL L+ IV+RD+ +N+LLD + ++DFG S L P E+
Sbjct: 118 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLREV 170
Query: 972 AGTIGYVAPEL----------AYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
GT Y+APE+ Y +V D++S GV+ + G P
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLLAGSPP 215
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G+G GSV + ++ SG +AVKK P S + ++ + E++ L ++H N++
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 117
Query: 873 FCSHARHSFIVYE--YLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFP 930
+ A S + YL + L+N ++L +I + L Y+H+
Sbjct: 118 VFTPAT-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 173
Query: 931 PIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELA-----YT 985
I++RD+ N+ ++ + E + DFG+++ + + + T Y APE+ Y
Sbjct: 174 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 230
Query: 986 MKVTEKSDVYSFGVLALEAIKGK 1008
M V D++S G + E + G+
Sbjct: 231 MTV----DIWSVGCIMAELLTGR 249
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.1 bits (126), Expect = 9e-07, Method: Composition-based stats.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 30/221 (13%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSE----MTCQQEFLNEVKS 858
AT+ ++ IG G G+VY+A + SG VA+K P E T ++ L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVAL--LRR 59
Query: 859 LTEIRHRNIVKFYGFCSHARHS-----FIVYEYLEMGSLAMILSNATSAEELGWTQRMNV 913
L H N+V+ C+ +R +V+E+++ L L A T + ++
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK-DL 117
Query: 914 IKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISK------SLKPDSSN 967
++ L +LH +C IV+RD+ +N+L+ ++DFG+++ +L P
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDP---- 170
Query: 968 WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGK 1008
+ T+ Y APE+ D++S G + E + K
Sbjct: 171 ---VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.1 bits (126), Expect = 9e-07, Method: Composition-based stats.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 30/221 (13%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSE----MTCQQEFLNEVKS 858
AT+ ++ IG G G+VY+A + SG VA+K P E T ++ L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVAL--LRR 59
Query: 859 LTEIRHRNIVKFYGFCSHARHS-----FIVYEYLEMGSLAMILSNATSAEELGWTQRMNV 913
L H N+V+ C+ +R +V+E+++ L L A T + ++
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK-DL 117
Query: 914 IKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISK------SLKPDSSN 967
++ L +LH +C IV+RD+ +N+L+ ++DFG+++ +L P
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAP---- 170
Query: 968 WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGK 1008
+ T+ Y APE+ D++S G + E + K
Sbjct: 171 ---VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 45/289 (15%)
Query: 814 IGTGGQGSVYRAE------LSSGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTEI-R 863
+G G G V A+ ++ VAVK +L E E ++E+K L I
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVK-----MLKEGATHSEHRALMSELKILIHIGH 126
Query: 864 HRNIVKFYGFCSHARHSF-IVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H N+V G C+ ++ E+ + G+L+ L + + ++ K D L+
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK---DFLT 183
Query: 923 YLHNDCFP-------------PIVYRDISSKNVLLDLEYEAHVSDFGISKSL--KPDSSN 967
H C+ ++RD++++N+LL + + DFG+++ + PD
Sbjct: 184 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 968 WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDR 1026
+ + ++APE + T +SDV+SFGVL E G P + R
Sbjct: 244 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV----KIDEEFCR 299
Query: 1027 TLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
L E R+ AP + + + + C P RPT ++ + L
Sbjct: 300 RLKE--GTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 45/289 (15%)
Query: 814 IGTGGQGSVYRAE------LSSGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTEI-R 863
+G G G V A+ ++ VAVK +L E E ++E+K L I
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVK-----MLKEGATHSEHRALMSELKILIHIGH 89
Query: 864 HRNIVKFYGFCSHARHSF-IVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H N+V G C+ ++ E+ + G+L+ L + + ++ K D L+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK---DFLT 146
Query: 923 YLHNDCFP-------------PIVYRDISSKNVLLDLEYEAHVSDFGISKSL--KPDSSN 967
H C+ ++RD++++N+LL + + DFG+++ + PD
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Query: 968 WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDR 1026
+ + ++APE + T +SDV+SFGVL E G P + R
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV----KIDEEFCR 262
Query: 1027 TLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
L E R+ AP + + + + C P RPT ++ + L
Sbjct: 263 RLKE--GTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 10/206 (4%)
Query: 806 NDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
+ FD +GTG G V + SG A+K + ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 865 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+VK + ++V EY+ G + S+ + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ ++YRD+ +N+L+D + V+DFG +K +K W L GT +APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEALAPEIIL 211
Query: 985 TMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ + D ++ GVL E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 68/289 (23%), Positives = 118/289 (40%), Gaps = 45/289 (15%)
Query: 814 IGTGGQGSVYRAE------LSSGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTEI-R 863
+G G G V A+ ++ VAVK +L E E ++E+K L I
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVK-----MLKEGATHSEHRALMSELKILIHIGH 80
Query: 864 HRNIVKFYGFCSHARHSFIVY-EYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H N+V G C+ +V E+ + G+L+ L + + ++ K D L+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK---DFLT 137
Query: 923 YLHNDCFP-------------PIVYRDISSKNVLLDLEYEAHVSDFGISKSL--KPDSSN 967
H C+ ++RD++++N+LL + + DFG+++ + PD
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 968 WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDR 1026
+ + ++APE + T +SDV+SFGVL E G P + R
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV----KIDEEFCR 253
Query: 1027 TLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
L E R+ AP + + + + C P RPT ++ + L
Sbjct: 254 RLKE--GTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 68/289 (23%), Positives = 118/289 (40%), Gaps = 45/289 (15%)
Query: 814 IGTGGQGSVYRAE------LSSGEIVAVKKFHSPLLSEMTCQQE---FLNEVKSLTEI-R 863
+G G G V A+ ++ VAVK +L E E ++E+K L I
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVK-----MLKEGATHSEHRALMSELKILIHIGH 80
Query: 864 HRNIVKFYGFCSHARHSFIVY-EYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
H N+V G C+ +V E+ + G+L+ L + + ++ K D L+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK---DFLT 137
Query: 923 YLHNDCFP-------------PIVYRDISSKNVLLDLEYEAHVSDFGISKSL--KPDSSN 967
H C+ ++RD++++N+LL + + DFG+++ + PD
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 968 WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDR 1026
+ + ++APE + T +SDV+SFGVL E G P + R
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV----KIDEEFCR 253
Query: 1027 TLDEILDPRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKVSQLL 1075
L E R+ AP + + + + C P RPT ++ + L
Sbjct: 254 RLKE--GTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp
Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12
An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp
Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12
An 193189
Length = 337
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
IG G G V+ + GE VAVK F + E + +E E+ +RH NI+ F
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTT--EEASWFRE--TEIYQTVLMRHENILGFIAA 99
Query: 874 CSHARHS----FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
S +++ +Y E GSL L + T L + + L +LH + F
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYLKSTT----LDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 930 -----PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNW----TELAGTIGYVAP 980
P I +RD+ SKN+L+ ++D G++ D++ GT Y+ P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
Query: 981 EL-----------AYTMKVTEKSDVYSFGVLALEAIK 1006
E+ +Y M +D+YSFG++ E +
Sbjct: 216 EVLDESLNRNHFQSYIM-----ADMYSFGLILWEVAR 247
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 18/215 (8%)
Query: 804 ATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSE----MTCQQEFLNEVKS 858
AT+ ++ IG G G+VY+A + SG VA+K P E T ++ L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVAL--LRR 59
Query: 859 LTEIRHRNIVKFYGFCSHARHS-----FIVYEYLEMGSLAMILSNATSAEELGWTQRMNV 913
L H N+V+ C+ +R +V+E+++ L L A T + ++
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK-DL 117
Query: 914 IKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAG 973
++ L +LH +C IV+RD+ +N+L+ ++DFG+++ + + +
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV- 173
Query: 974 TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGK 1008
T+ Y APE+ D++S G + E + K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 63/219 (28%), Positives = 91/219 (41%), Gaps = 25/219 (11%)
Query: 799 EEIVRATNDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVK 857
EE+ AT+ +G G G V+R E +G AVKK + + E L
Sbjct: 71 EEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVF-----RAEELMACA 121
Query: 858 SLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGV 917
LT R IV YG I E LE GSL ++ E + + +
Sbjct: 122 GLTSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE---DRALYYLGQA 175
Query: 918 ADALSYLHNDCFPPIVYRDISSKNVLLDLE-YEAHVSDFGISKSLKPDSSNWTELAG--- 973
+ L YLH+ I++ D+ + NVLL + A + DFG + L+PD L G
Sbjct: 176 LEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYI 232
Query: 974 --TIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
T ++APE+ K DV+S + L + G HP
Sbjct: 233 PGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 11/161 (6%)
Query: 853 LNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMN 912
L EV+ L ++ H NI+K + + +IV E G L +
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL---FDEIIKRKRFSEHDAAR 125
Query: 913 VIKGVADALSYLHNDCFPPIVYRDISSKNVLL---DLEYEAHVSDFGISKSLKPDSSNWT 969
+IK V ++Y+H IV+RD+ +N+LL + + + + DFG+S + + +
Sbjct: 126 IIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMK 181
Query: 970 ELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+ GT Y+APE+ EK DV+S GV+ + G P
Sbjct: 182 DRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 90/206 (43%), Gaps = 25/206 (12%)
Query: 814 IGTGGQG-SVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG+G G + + S E+VAVK + ++E +N +RH NIV+F
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH----RSLRHPNIVRFKE 81
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATS-AEELGWTQRMNVIKGVADALSYLHNDCFPP 931
H IV EY G L + NA +E+ +I GV SY H
Sbjct: 82 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV----SYCHA---MQ 134
Query: 932 IVYRDISSKNVLLD--LEYEAHVSDFGISKS----LKPDSSNWTELAGTIGYVAPELAYT 985
+ +RD+ +N LLD + DFG SKS +P S+ GT Y+APE+
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLLK 189
Query: 986 MKVTEK-SDVYSFGVLALEAIKGKHP 1010
+ K +DV+S GV + G +P
Sbjct: 190 KEYDGKVADVWSCGVTLYVMLVGAYP 215
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 835 VKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 894
+KK S C++E EV L ++ H NI+ + + ++ E + G L
Sbjct: 45 IKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFD 104
Query: 895 ILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNV-LLDLEYEA-HV 952
L+ S E T + IK + D ++YLH I + D+ +N+ LLD H+
Sbjct: 105 FLAQKESLSEEEAT---SFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 953 S--DFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
DFG++ ++ D + + GT +VAPE+ + ++D++S GV+ + G P
Sbjct: 159 KLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 1011 ------RDFISSICSTSSNLD 1025
++ +++I + S + D
Sbjct: 218 FLGDTKQETLANITAVSYDFD 238
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 64/245 (26%), Positives = 101/245 (41%), Gaps = 30/245 (12%)
Query: 806 NDFDEEHCIGTGGQGSVYRAEL----SSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
+D D + G G+ A L + E+VAVK + ++E +N
Sbjct: 16 HDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINH----RS 71
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
+RH NIV+F H IV EY G L + NA E + + + +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSE---DEARFFFQQLISGV 128
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAH--VSDFGISKS----LKPDSSNWTELAGTI 975
SY H + +RD+ +N LLD ++DFG SK+ +P S+ GT
Sbjct: 129 SYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA-----VGTP 180
Query: 976 GYVAPELAYTMKVTEK-SDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDRTLDEILDP 1034
Y+APE+ + K +DV+S GV + G +P + N +T+ IL+
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE----PKNFRKTIHRILNV 236
Query: 1035 RLPAP 1039
+ P
Sbjct: 237 QYAIP 241
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 89/206 (43%), Gaps = 25/206 (12%)
Query: 814 IGTGGQG-SVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG+G G + + S E+VAVK ++E +N +RH NIV+F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINH----RSLRHPNIVRFKE 82
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATS-AEELGWTQRMNVIKGVADALSYLHNDCFPP 931
H IV EY G L + NA +E+ +I GV SY H
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV----SYCHA---MQ 135
Query: 932 IVYRDISSKNVLLD--LEYEAHVSDFGISKS----LKPDSSNWTELAGTIGYVAPELAYT 985
+ +RD+ +N LLD + DFG SKS +P S+ GT Y+APE+
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLLK 190
Query: 986 MKVTEK-SDVYSFGVLALEAIKGKHP 1010
+ K +DV+S GV + G +P
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 96/238 (40%), Gaps = 31/238 (13%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAEL----SSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R L +G A+K
Sbjct: 19 FLAKAKEDFLKKWESPAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQ 78
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + + +VK + + + + +L M+L A
Sbjct: 79 KVVKLKQIEHTLNEKRIQQAVNFPFLVK------------LEFSFKDNSNLYMVLEYAPG 126
Query: 902 AEELGWTQRMNVIK---------GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHV 952
E +R+ + YLH+ ++YRD+ +N+L+D + V
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKV 183
Query: 953 SDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+DFG +K +K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 184 ADFGFAKRVK--GRTW-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide
Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide
Peptide
Length = 378
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 808 FDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLN-EVKSLTEIRHR 865
+ + IG G G VY+A+L SGE+VA+KK +L + + F N E++ + ++ H
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQD----KRFKNRELQIMRKLDHC 92
Query: 866 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
NIV+ Y F S VY +Y+ + + + + L + +
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 152
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSDFGISKSLKPDSSNWTELAGTIGYV 978
+L+Y+H+ I +RDI +N+LLD + + DFG +K L N + + Y
Sbjct: 153 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 208
Query: 979 APELAY-TMKVTEKSDVYSFGVLALEAIKGK 1008
APEL + T DV+S G + E + G+
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 142/559 (25%), Positives = 216/559 (38%), Gaps = 89/559 (15%)
Query: 176 IGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSEIGNLKSLSGLEL 235
+ S+LK H IP L +N+ ++ L +N L P+ L+ L+
Sbjct: 8 VADCSHLKLTH---------IPDDLP--SNITVLNLTHNQLRRLPPTNFTRYSQLAILDA 56
Query: 236 GYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSE 295
G+N +S P LP L L+L N LS +F TNL L+L NS+ +
Sbjct: 57 GFNSISKLEPELCQILPLLKVLNLQHNELSQISDQTFVFCTNLTELDLMSNSIHKIKSNP 116
Query: 296 MGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDN--LLFGSIPCEIGNLRYLFYL 353
N K+L L LS N LS + + L L L L+ N L S E L L
Sbjct: 117 FKNQKNLIKLDLSHNGLSSTKLGTGVQLENLQELLLAKNKILALRSEELEFLGNSSLRKL 176
Query: 354 ELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGSIPSEIXXXXXXXXXXXXXXXXXXXIP 413
+L N L P + L L L L+ + ++
Sbjct: 177 DLSSNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEKLC-------------------- 216
Query: 414 YSFGNLTNMIVLSIYSNALSGAIPKEYGNL--VKLTLLVLSYNQLQGP-------IPDLR 464
+ N T++ LS+ +N L + L LT L LSYN L +P LR
Sbjct: 217 WELSN-TSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLR 275
Query: 465 NLTRLARVRLDRNHLTGNISESFGIHSNLSYINL------------SHKKFYGEISFDWG 512
L+ L+ N++ SF SNL Y++L SH + SF W
Sbjct: 276 YLS------LEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNI-DDFSFQWL 328
Query: 513 KFPNLGTLDVSANNITGILPPEIGDSPQLKVLDLSSNH-----IVGEIPSELGKLRSLIK 567
K+ L L++ NNI LK L LS + E L L+
Sbjct: 329 KY--LEYLNMDDNNIPSTKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAH-SPLLT 385
Query: 568 LTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGS----LGNLVKLY-----YLNL 618
L L +N S L QL LDL N + + G L N+ ++Y YL L
Sbjct: 386 LNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQL 445
Query: 619 SNNQFSGEIPIK--LEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIP 676
S + F+ ++ + + + L ++D+S PS +++L L+L++NN++
Sbjct: 446 STSSFALVPSLQRLMLRRVALKNVDIS--------PSPFRPLRNLTILDLSNNNIANINE 497
Query: 677 RCFKEMHGLVYIDISYNKL 695
+ + L +D +N L
Sbjct: 498 DLLEGLENLEILDFQHNNL 516
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 144/555 (25%), Positives = 210/555 (37%), Gaps = 76/555 (13%)
Query: 109 HLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTNQF 168
++ L+L NQ+ + P+ S+L LD NS S P L +LK+L L N+
Sbjct: 26 NITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNEL 85
Query: 169 SGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSEIGNLK 228
S + L L L N + N NL + L +N LS + L+
Sbjct: 86 SQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQLE 145
Query: 229 SLSGLELGYNKLSGSMPLSLGNLPN--LATLDLHDNSLSGSIPLSFGNLTNLDILNL--- 283
+L L L NK+ L L N L LDL N L P F + L L L
Sbjct: 146 NLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNA 205
Query: 284 ---PHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNL--TKLTILYLSDNLLFG 338
PH L+ + E+ N S+ L L+ N+L + S+ L T LT L LS N L
Sbjct: 206 QLNPH--LTEKLCWELSN-TSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHD 262
Query: 339 SIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGSIPSEIXXXXXX 398
L L YL L N + P S L+NL L L S+
Sbjct: 263 VGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSV---------- 312
Query: 399 XXXXXXXXXXXXXIPYSFGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQG 458
+SF L + L++ N + + LV L L LS
Sbjct: 313 -----SLASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSLS------ 361
Query: 459 PIPDLRNLTRLARVRLDRNHLTGNISESFGIHSNLSYINLSHKKFYGEISFDWGKFPNLG 518
+ T L + +N ++++L+H L
Sbjct: 362 -----KTFTSLQTL------------------TNETFVSLAHSP--------------LL 384
Query: 519 TLDVSANNITGILPPEIGDSPQLKVLDLSSNHIVGEIP-SELGKLRSLIKLTLNRNQFSG 577
TL+++ N+I+ I QL++LDL N I ++ E LR++ ++ L+ N++
Sbjct: 385 TLNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYL- 443
Query: 578 QLPTELGSLI-QLEHLDLSSNRLSNS--IPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKF 634
QL T +L+ L+ L L L N P L L L+LSNN + LE
Sbjct: 444 QLSTSSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTILDLSNNNIANINEDLLEGL 503
Query: 635 IHLSDLDLSHNFLGE 649
+L LD HN L
Sbjct: 504 ENLEILDFQHNNLAR 518
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 143/560 (25%), Positives = 210/560 (37%), Gaps = 70/560 (12%)
Query: 180 SYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYNK 239
S + L+L N L P + + LAI+ NS+S P L L L L +N+
Sbjct: 25 SNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNE 84
Query: 240 LSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGS-------- 291
LS + NL LDL NS+ F N NL L+L HN LS +
Sbjct: 85 LSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQL 144
Query: 292 ---------------IPSE----MGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLS 332
+ SE +GN SL L LS N L P + KL L L+
Sbjct: 145 ENLQELLLAKNKILALRSEELEFLGN-SSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLN 203
Query: 333 DNLL----FGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNL--TNLATLYLFTNLLSG 386
+ L + E+ N + L L +N+L + + L TNL L L N L
Sbjct: 204 NAQLNPHLTEKLCWELSNTS-IQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHD 262
Query: 387 SIPSEIXXXXXXXXXXXXXXXXXXXIPYSFGNLTNMIVLSIYSNALSGAIP-KEYGNLVK 445
P SF L+N+ LS+ ++ + N+
Sbjct: 263 VGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDD 322
Query: 446 LTLLVLSYNQLQGPIPDLRNLTRLARVRLDRNHLTGNISESFGIHSNLSYINLSHKKFYG 505
+ L Y L + +D N++ S +F +L Y++LS K F
Sbjct: 323 FSFQWLKY---------------LEYLNMDDNNIPSTKSNTFTGLVSLKYLSLS-KTFTS 366
Query: 506 EISFDWGKFPNLG-----TLDVSANNITGILPPEIGDSPQLKVLDLSSNHIVGEIP-SEL 559
+ F +L TL+++ N+I+ I QL++LDL N I ++ E
Sbjct: 367 LQTLTNETFVSLAHSPLLTLNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKLSGQEW 426
Query: 560 GKLRSLIKLTLNRNQFSGQLPTELGSLI-QLEHLDLSSNRLSNS--IPGSLGNLVKLYYL 616
LR++ ++ L+ N++ QL T +L+ L+ L L L N P L L L
Sbjct: 427 RGLRNIFEIYLSYNKYL-QLSTSSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTIL 485
Query: 617 NLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIPSQ--------VCSMQSLEKLNLAH 668
+LSNN + LE +L LD HN L + + L LNL
Sbjct: 486 DLSNNNIANINEDLLEGLENLEILDFQHNNLARLWKRANPGGPVNFLKGLSHLHILNLES 545
Query: 669 NNLSGFIPRCFKEMHGLVYI 688
N L FK + L I
Sbjct: 546 NGLDEIPVGVFKNLFELKSI 565
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 111/270 (41%), Gaps = 61/270 (22%)
Query: 491 SNLSYINLSHKKFYGEISFDWGKFPNLGTLDVSANNITGILPPEIGDSPQLKVLDLSSNH 550
SN++ +NL+H + ++ ++ L LD N+I+ + P P LKVL+L N
Sbjct: 25 SNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNE 84
Query: 551 I----------------VGEIPSELGKLRS--------LIKLTLNRNQFSGQLPTELGSL 586
+ + + + + K++S LIKL L+ N S T+LG+
Sbjct: 85 LSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSS---TKLGTG 141
Query: 587 I-----------------------------QLEHLDLSSNRLSNSIPGSLGNLVKLYYLN 617
+ L LDLSSN L PG + KL+ L
Sbjct: 142 VQLENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALL 201
Query: 618 LSNNQFSGEIPIKLEKFIH---LSDLDLSHNFLGEEIPSQVCSMQ--SLEKLNLAHNNLS 672
L+N Q + + KL + + +L L++N L S ++ +L +L+L++NNL
Sbjct: 202 LNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLH 261
Query: 673 GFIPRCFKEMHGLVYIDISYNKLHGPIPNS 702
F + L Y+ + YN + P S
Sbjct: 262 DVGNGSFSYLPSLRYLSLEYNNIQRLSPRS 291
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 189/476 (39%), Gaps = 62/476 (13%)
Query: 96 IGTLHDFSFSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNL 155
+ + D +F +L LDL N I I + N L LDLS N S T L
Sbjct: 85 LSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQL 144
Query: 156 SMLKILYLSTNQFSGRIPPQIGHL--SYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYN 213
L+ L L+ N+ ++ L S L+ L L N L P + L + L N
Sbjct: 145 ENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNN 204
Query: 214 NSLSGSIPS----EIGNLKSLSGLELGYNKLSGSMPLSLGNLP--NLATLDLHDNSLSGS 267
L+ + E+ N S+ L L N+L + + L NL LDL N+L
Sbjct: 205 AQLNPHLTEKLCWELSN-TSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDV 263
Query: 268 IPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGL--SFNKLSGSIPSSLGNLTK 325
SF L +L L+L +N++ P L +L L L +F K S S+ S N+
Sbjct: 264 GNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASH-PNIDD 322
Query: 326 LTILYLSDNLLFGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYL---FTN 382
+ + L+YL YL + DN + + ++ L +L L L FT+
Sbjct: 323 FSFQW----------------LKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSLSKTFTS 366
Query: 383 LLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPYSFGNLTN--MIVLSIYSNALSGAIPKEY 440
L ++ +E +F +L + ++ L++ N +S +
Sbjct: 367 L--QTLTNE-----------------------TFVSLAHSPLLTLNLTKNHISKIANGTF 401
Query: 441 GNLVKLTLLVLSYNQLQGPI--PDLRNLTRLARVRLDRNHLTGNISESFGIHSNLSYINL 498
L +L +L L N+++ + + R L + + L N + SF + +L + L
Sbjct: 402 SWLGQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLML 461
Query: 499 SHKKFYG-EIS-FDWGKFPNLGTLDVSANNITGILPPEIGDSPQLKVLDLSSNHIV 552
+IS + NL LD+S NNI I + L++LD N++
Sbjct: 462 RRVALKNVDISPSPFRPLRNLTILDLSNNNIANINEDLLEGLENLEILDFQHNNLA 517
Score = 36.6 bits (83), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 117/300 (39%), Gaps = 50/300 (16%)
Query: 89 NLTSAGL-IGTLHDF---SFSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDL----S 140
NLT L LHD SFS P L YL L N I + P S L+YL L +
Sbjct: 249 NLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFT 308
Query: 141 SNSFSGTIPPQIGNLSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSL 200
S S P I + S L YL+ L++ +N + + +
Sbjct: 309 KQSVSLASHPNIDDFSF-------------------QWLKYLEYLNMDDNNIPSTKSNTF 349
Query: 201 GNLTNLAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLH 260
L +L + SLS K+ + L+ L+ +SL + P L TL+L
Sbjct: 350 TGLVSLKYL-----SLS----------KTFTSLQ----TLTNETFVSLAHSP-LLTLNLT 389
Query: 261 DNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIP-SEMGNLKSLYGLGLSFNKLSGSIPSS 319
N +S +F L L IL+L N + + E L++++ + LS+NK SS
Sbjct: 390 KNHISKIANGTFSWLGQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQLSTSS 449
Query: 320 LGNLTKLTILYLSDNLL--FGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATL 377
+ L L L L P LR L L+L +N ++ L L NL L
Sbjct: 450 FALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTILDLSNNNIANINEDLLEGLENLEIL 509
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5-
Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)
Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-(5-Methyl-
1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With (1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 96/238 (40%), Gaps = 31/238 (13%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA----ELSSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R + +G A+K
Sbjct: 19 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ 78
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + + K + + + + +L M++ A
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLTK------------LEFSFKDNSNLYMVMEYAPG 126
Query: 902 AEELGWTQRMNVIK---------GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHV 952
E +R+ + YLH+ ++YRD+ +N+++D + V
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 183
Query: 953 SDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+DFG +K +K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 184 TDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 96/238 (40%), Gaps = 31/238 (13%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA----ELSSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R + +G A+K
Sbjct: 19 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ 78
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + + K + + + + +L M++ A
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLTK------------LEFSFKDNSNLYMVMEYAPG 126
Query: 902 AEELGWTQRMNVIK---------GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHV 952
E +R+ + YLH+ ++YRD+ +N+++D + V
Sbjct: 127 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 183
Query: 953 SDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+DFG +K +K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 184 TDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 808 FDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLN-EVKSLTEIRHR 865
+ + IG G G VY+A+L SGE+VA+KK +L + + F N E++ + ++ H
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQD----KRFKNRELQIMRKLDHC 85
Query: 866 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
NIV+ Y F S VY +Y+ + + + + L + +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSDFGISKSLKPDSSNWTELAGTIGYV 978
+L+Y+H+ I +RDI +N+LLD + + DFG +K L N + + Y
Sbjct: 146 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 201
Query: 979 APELAY-TMKVTEKSDVYSFGVLALEAIKGK 1008
APEL + T DV+S G + E + G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 808 FDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLN-EVKSLTEIRHR 865
+ + IG G G VY+A+L SGE+VA+KK +L + + F N E++ + ++ H
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQD----KRFKNRELQIMRKLDHC 81
Query: 866 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
NIV+ Y F S VY +Y+ + + + + L + +
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 141
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSDFGISKSLKPDSSNWTELAGTIGYV 978
+L+Y+H+ I +RDI +N+LLD + + DFG +K L N + + Y
Sbjct: 142 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 197
Query: 979 APELAY-TMKVTEKSDVYSFGVLALEAIKGK 1008
APEL + T DV+S G + E + G+
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-Phenyl-C-(4-(
9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (1-(9h-Purin-6-
Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (1-(9h-Purin-6-
Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 96/238 (40%), Gaps = 31/238 (13%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA----ELSSGEIVAVKKFHSP 841
FL+ D +E + T D+ I T G GS R + +G A+K
Sbjct: 19 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ 78
Query: 842 LLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATS 901
+ ++ + LNE + L + + K + + + + +L M++ A
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLTK------------LEFSFKDNSNLYMVMEYAPG 126
Query: 902 AEELGWTQRMNVIK---------GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHV 952
E +R+ + YLH+ ++YRD+ +N+++D + V
Sbjct: 127 GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 183
Query: 953 SDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+DFG +K +K W L GT Y+APE+ + + D ++ GVL E G P
Sbjct: 184 TDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase
6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein Kinase
6 (Mapk6)
Length = 320
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFY- 871
+G GG G V+ A + + VA+KK +L++ + L E+K + + H NIVK +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKI---VLTDPQSVKHALREIKIIRRLDHDNIVKVFE 75
Query: 872 -------------GFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVA 918
G + +IV EY+E LA +L EE +++G
Sbjct: 76 ILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGPLLEEHARLFMYQLLRG-- 132
Query: 919 DALSYLHNDCFPPIVYRDISSKNVLLDLE-YEAHVSDFGISKSLKPDSSNWTELAG---T 974
L Y+H+ +++RD+ N+ ++ E + DFG+++ + P S+ L+ T
Sbjct: 133 --LKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVT 187
Query: 975 IGYVAPELAYTM-KVTEKSDVYSFGVLALEAIKGK 1008
Y +P L + T+ D+++ G + E + GK
Sbjct: 188 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 808 FDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLN-EVKSLTEIRHR 865
+ + IG G G VY+A+L SGE+VA+KK +L + + F N E++ + ++ H
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQD----KRFKNRELQIMRKLDHC 85
Query: 866 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
NIV+ Y F S VY +Y+ + + + + L + +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSDFGISKSLKPDSSNWTELAGTIGYV 978
+L+Y+H+ I +RDI +N+LLD + + DFG +K L N + + Y
Sbjct: 146 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 201
Query: 979 APELAY-TMKVTEKSDVYSFGVLALEAIKGK 1008
APEL + T DV+S G + E + G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 808 FDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLN-EVKSLTEIRHR 865
+ + IG G G VY+A+L SGE+VA+KK +L + + F N E++ + ++ H
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQD----KRFKNRELQIMRKLDHC 86
Query: 866 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
NIV+ Y F S VY +Y+ + + + + L + +
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 146
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSDFGISKSLKPDSSNWTELAGTIGYV 978
+L+Y+H+ I +RDI +N+LLD + + DFG +K L N + + Y
Sbjct: 147 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 202
Query: 979 APELAY-TMKVTEKSDVYSFGVLALEAIKGK 1008
APEL + T DV+S G + E + G+
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 814 IGTGGQGSVYR-AELSSGEIVAVKKFHSPL-LSEMTCQQEFLNEVKSLTEIRHRNIVKFY 871
+G+G G V+R E ++G + K ++P L + T + NE+ + ++ H ++ +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVK----NEISIMNQLHHPKLINLH 114
Query: 872 GFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPP 931
++ E+L G L + A ++ + +N ++ + L ++H
Sbjct: 115 DAFEDKYEMVLILEFLSGGELFDRI--AAEDYKMSEAEVINYMRQACEGLKHMHEHS--- 169
Query: 932 IVYRDISSKNVLLDLEYEAHVS--DFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVT 989
IV+ DI +N++ + + + V DFG++ L PD A T + APE+ V
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA-TAEFAAPEIVDREPVG 228
Query: 990 EKSDVYSFGVLALEAIKGKHP 1010
+D+++ GVL + G P
Sbjct: 229 FYTDMWAIGVLGYVLLSGLSP 249
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 17/212 (8%)
Query: 804 ATNDFDE-EHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEI 862
A +DF E E +G G VYR + + K + +L + ++ E+ L +
Sbjct: 50 ALSDFFEVESELGRGATSIVYRCKQKGTQ----KPYALKVLKKTVDKKIVRTEIGVLLRL 105
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSL-AMILSNATSAEELGWTQRMNVIKGVADAL 921
H NI+K +V E + G L I+ +E + +K + +A+
Sbjct: 106 SHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSER----DAADAVKQILEAV 161
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDL---EYEAHVSDFGISKSLKPDSSNWTELAGTIGYV 978
+YLH + IV+RD+ +N+L + ++DFG+SK ++ T + GT GY
Sbjct: 162 AYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT-VCGTPGYC 217
Query: 979 APELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
APE+ + D++S G++ + G P
Sbjct: 218 APEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 808 FDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLN-EVKSLTEIRHR 865
+ + IG G G VY+A+L SGE+VA+KK + + F N E++ + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 73
Query: 866 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
NIV+ Y F S +VY +Y+ + + + + L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSDFGISKSLKPDSSNWTELAGTIGYV 978
+L+Y+H+ I +RDI +N+LLD + + DFG +K L N + + Y
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 189
Query: 979 APELAY-TMKVTEKSDVYSFGVLALEAIKGK 1008
APEL + T DV+S G + E + G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 808 FDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLN-EVKSLTEIRHR 865
+ + IG G G VY+A+L SGE+VA+KK +L + + F N E++ + ++ H
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQD----KRFKNRELQIMRKLDHC 107
Query: 866 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
NIV+ Y F S VY +Y+ + + + + L + +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSDFGISKSLKPDSSNWTELAGTIGYV 978
+L+Y+H+ I +RDI +N+LLD + + DFG +K L N + + Y
Sbjct: 168 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 223
Query: 979 APELAY-TMKVTEKSDVYSFGVLALEAIKGK 1008
APEL + T DV+S G + E + G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4-
Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4-
Arylmaleimide Inhibitor
Length = 391
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 808 FDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLN-EVKSLTEIRHR 865
+ + IG G G VY+A+L SGE+VA+KK +L + + F N E++ + ++ H
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQD----KRFKNRELQIMRKLDHC 78
Query: 866 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
NIV+ Y F S VY +Y+ + + + + L + +
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 138
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSDFGISKSLKPDSSNWTELAGTIGYV 978
+L+Y+H+ I +RDI +N+LLD + + DFG +K L N + + Y
Sbjct: 139 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 194
Query: 979 APELAY-TMKVTEKSDVYSFGVLALEAIKGK 1008
APEL + T DV+S G + E + G+
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 808 FDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLN-EVKSLTEIRHR 865
+ + IG G G VY+A+L SGE+VA+KK +L + + F N E++ + ++ H
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQD----KRFKNRELQIMRKLDHC 152
Query: 866 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
NIV+ Y F S VY +Y+ + + + + L + +
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 212
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSDFGISKSLKPDSSNWTELAGTIGYV 978
+L+Y+H+ I +RDI +N+LLD + + DFG +K L N + + Y
Sbjct: 213 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 268
Query: 979 APELAY-TMKVTEKSDVYSFGVLALEAIKGK 1008
APEL + T DV+S G + E + G+
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 47/200 (23%), Positives = 95/200 (47%), Gaps = 11/200 (5%)
Query: 814 IGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G+V++A+ + EIVA+K+ E L E+ L E++H+NIV+ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-GVPSSALREICLLKELKHKNIVRLHD 68
Query: 873 FCSHARHSFIVYEYLEMGSLAMILS-NATSAEELGWTQRMNVIKGVADALSYLHNDCFPP 931
+ +V+E+ + S N E+ + ++KG L + H+
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKG----LGFCHSR---N 121
Query: 932 IVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEK 991
+++RD+ +N+L++ E ++DFG++++ ++ T+ Y P++ + K+
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 992 S-DVYSFGVLALEAIKGKHP 1010
S D++S G + E P
Sbjct: 182 SIDMWSAGCIFAELANAARP 201
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 22/169 (13%)
Query: 853 LNEVKSLTEIR-HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRM 911
L EV L ++ H NI++ F+V++ ++ G L L+ + E + M
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 912 NVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTEL 971
+ V AL L+ IV+RD+ +N+LLD + ++DFG S L P +
Sbjct: 131 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLRSV 183
Query: 972 AGTIGYVAPEL----------AYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
GT Y+APE+ Y +V D++S GV+ + G P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLLAGSPP 228
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 25/231 (10%)
Query: 806 NDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
NDF IG GG G VY + +G++ A+K + + LNE L+ +
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 865 RN----IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT-QRMNVIKGVAD 919
+ + Y F + + SFI+ + + G L LS E +I G
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG--- 303
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL---KPDSSNWTELAGTIG 976
L ++HN +VYRD+ N+LLD +SD G++ KP +S GT G
Sbjct: 304 -LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHG 354
Query: 977 YVAPE-LAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDR 1026
Y+APE L + +D +S G + + ++G P F +DR
Sbjct: 355 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP--FRQHKTKDKHEIDR 403
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/134 (35%), Positives = 62/134 (46%), Gaps = 3/134 (2%)
Query: 257 LDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSI 316
LDL L+ +F LT L LNL +N L +L L LGL+ N+L+
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLP 99
Query: 317 PSSLGNLTKLTILYLSDNLLFGSIPCEI-GNLRYLFYLELGDNKLSGSIPHSLGNLTNLA 375
+LT+L LYL N L S+P + L L L L N+L + LTNL
Sbjct: 100 LGVFDHLTQLDKLYLGGNQL-KSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQ 158
Query: 376 TLYLFTNLLSGSIP 389
TL L TN L S+P
Sbjct: 159 TLSLSTNQLQ-SVP 171
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 88 INLTSAGLIGTLHDFSFSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGT 147
++L S GL TL D +F L +L+L NQ+ + + ++L L L++N +
Sbjct: 40 LDLQSTGL-ATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASL 98
Query: 148 IPPQIGNLSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLA 207
+L+ L LYL NQ L+ LK L L N L + LTNL
Sbjct: 99 PLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQ 158
Query: 208 IMYLYNNSLSGSIP----SEIGNLKSLS 231
+ L N L S+P +G L++++
Sbjct: 159 TLSLSTNQLQ-SVPHGAFDRLGKLQTIT 185
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 491 SNLSYINLSHKKFYGEISFDWGKFPNLGTLDVSANNITGILPPEIGDS-PQLKVLDLSSN 549
+ L+++NL + + + + LGTL + ANN LP + D QL L L N
Sbjct: 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL-ANNQLASLPLGVFDHLTQLDKLYLGGN 117
Query: 550 HIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGN 609
+ +L L +L LN NQ L L+ L LS+N+L + G+
Sbjct: 118 QLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDR 177
Query: 610 LVKLYYLNLSNNQF 623
L KL + L NQF
Sbjct: 178 LGKLQTITLFGNQF 191
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 56/159 (35%), Positives = 72/159 (45%), Gaps = 30/159 (18%)
Query: 227 LKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLS-FGNLTNLDILNLPH 285
L L+ L L YN+L +L L TL L +N L+ S+PL F +LT LD L L
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGG 116
Query: 286 NSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNLLFGSIPC-EI 344
N L S+PS + F++L TKL L L+ N L SIP
Sbjct: 117 NQLK-SLPSGV------------FDRL-----------TKLKELRLNTNQL-QSIPAGAF 151
Query: 345 GNLRYLFYLELGDNKLSGSIPH-SLGNLTNLATLYLFTN 382
L L L L N+L S+PH + L L T+ LF N
Sbjct: 152 DKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGN 189
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 49/159 (30%), Positives = 67/159 (42%), Gaps = 19/159 (11%)
Query: 179 LSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYN 238
L+ L L+L N L +LT L + L NN L+ +L L L LG N
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 117
Query: 239 KLSGSMPLSLGNLPNLATLDLHDNSLSGSIPL-SFGNLTNLDILNLPHNSLSGSIP---- 293
+L L L L L+ N L SIP +F LTNL L+L N L S+P
Sbjct: 118 QLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAF 175
Query: 294 SEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLS 332
+G L+++ G F + ++ ILYLS
Sbjct: 176 DRLGKLQTITLFGNQF------------DCSRCEILYLS 202
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 49/169 (28%), Positives = 65/169 (38%), Gaps = 4/169 (2%)
Query: 124 IPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTNQFSGRIPPQIGHLSYLK 183
+PS I +++ LDL S + L+ L L L NQ L+ L
Sbjct: 29 VPSGIPADTE--KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELG 86
Query: 184 ALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSEI-GNLKSLSGLELGYNKLSG 242
L L N L+ +LT L +YL N L S+PS + L L L L N+L
Sbjct: 87 TLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQS 145
Query: 243 SMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGS 291
+ L NL TL L N L +F L L + L N S
Sbjct: 146 IPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194
Score = 36.6 bits (83), Expect = 0.074, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 61/156 (39%), Gaps = 2/156 (1%)
Query: 113 LDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTNQFSGRI 172
LDL+ + + + +KL +L+L N +L+ L L L+ NQ +
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLP 99
Query: 173 PPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPS-EIGNLKSLS 231
HL+ L L+L N L LT L + L N L SIP+ L +L
Sbjct: 100 LGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQ 158
Query: 232 GLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGS 267
L L N+L + L L T+ L N S
Sbjct: 159 TLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194
Score = 35.4 bits (80), Expect = 0.16, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 49/124 (39%), Gaps = 1/124 (0%)
Query: 590 EHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGE 649
E LDL S L+ + L KL +LNL NQ + L L L++N L
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS 97
Query: 650 EIPSQVCSMQSLEKLNLAHNNLSGFIPRCFKEMHGLVYIDISYNKLHGPIPNSAAFKHAP 709
+ L+KL L N L F + L + ++ N+L IP A K
Sbjct: 98 LPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQS-IPAGAFDKLTN 156
Query: 710 MEAL 713
++ L
Sbjct: 157 LQTL 160
Score = 34.7 bits (78), Expect = 0.27, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 2/153 (1%)
Query: 544 LDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSI 603
LDL S + + L L L L+ NQ L +L L L++N+L++
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLP 99
Query: 604 PGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIPSQVC-SMQSLE 662
G +L +L L L NQ ++ L +L L+ N L + IP+ + +L+
Sbjct: 100 LGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQL-QSIPAGAFDKLTNLQ 158
Query: 663 KLNLAHNNLSGFIPRCFKEMHGLVYIDISYNKL 695
L+L+ N L F + L I + N+
Sbjct: 159 TLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 34.3 bits (77), Expect = 0.39, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 45/113 (39%), Gaps = 1/113 (0%)
Query: 540 QLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRL 599
+L L+L N + L L L L NQ + L QL+ L L N+L
Sbjct: 60 KLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQL 119
Query: 600 SNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIP 652
+ G L KL L L+ NQ +K +L L LS N L + +P
Sbjct: 120 KSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQL-QSVP 171
Score = 34.3 bits (77), Expect = 0.44, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 57/141 (40%), Gaps = 12/141 (8%)
Query: 62 TLNNAT--KISPCAWFGIHCNHAGKVNS---INLTSAGLIG----TLHDFSFSSFPHLAY 112
TL++AT ++ W + N +++ +LT G +G L F HL
Sbjct: 49 TLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQ 108
Query: 113 LD---LRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTNQFS 169
LD L NQ+ + +KLK L L++N L+ L+ L LSTNQ
Sbjct: 109 LDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ 168
Query: 170 GRIPPQIGHLSYLKALHLFEN 190
L L+ + LF N
Sbjct: 169 SVPHGAFDRLGKLQTITLFGN 189
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/134 (35%), Positives = 62/134 (46%), Gaps = 3/134 (2%)
Query: 257 LDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSI 316
LDL L+ +F LT L LNL +N L +L L LGL+ N+L+
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLP 99
Query: 317 PSSLGNLTKLTILYLSDNLLFGSIPCEI-GNLRYLFYLELGDNKLSGSIPHSLGNLTNLA 375
+LT+L LYL N L S+P + L L L L N+L + LTNL
Sbjct: 100 LGVFDHLTQLDKLYLGGNQL-KSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQ 158
Query: 376 TLYLFTNLLSGSIP 389
TL L TN L S+P
Sbjct: 159 TLSLSTNQLQ-SVP 171
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 88 INLTSAGLIGTLHDFSFSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGT 147
++L S GL TL D +F L +L+L NQ+ + + ++L L L++N +
Sbjct: 40 LDLQSTGL-ATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASL 98
Query: 148 IPPQIGNLSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLA 207
+L+ L LYL NQ L+ LK L L N L + LTNL
Sbjct: 99 PLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQ 158
Query: 208 IMYLYNNSLSGSIP----SEIGNLKSLS 231
+ L N L S+P +G L++++
Sbjct: 159 TLSLSTNQLQ-SVPHGAFDRLGKLQTIT 185
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 491 SNLSYINLSHKKFYGEISFDWGKFPNLGTLDVSANNITGILPPEIGDS-PQLKVLDLSSN 549
+ L+++NL + + + + LGTL + ANN LP + D QL L L N
Sbjct: 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL-ANNQLASLPLGVFDHLTQLDKLYLGGN 117
Query: 550 HIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGN 609
+ +L L +L LN NQ L L+ L LS+N+L + G+
Sbjct: 118 QLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDR 177
Query: 610 LVKLYYLNLSNNQF 623
L KL + L NQF
Sbjct: 178 LGKLQTITLFGNQF 191
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 56/159 (35%), Positives = 72/159 (45%), Gaps = 30/159 (18%)
Query: 227 LKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLS-FGNLTNLDILNLPH 285
L L+ L L YN+L +L L TL L +N L+ S+PL F +LT LD L L
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGG 116
Query: 286 NSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNLLFGSIPC-EI 344
N L S+PS + F++L TKL L L+ N L SIP
Sbjct: 117 NQLK-SLPSGV------------FDRL-----------TKLKELRLNTNQL-QSIPAGAF 151
Query: 345 GNLRYLFYLELGDNKLSGSIPH-SLGNLTNLATLYLFTN 382
L L L L N+L S+PH + L L T+ LF N
Sbjct: 152 DKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGN 189
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 49/169 (28%), Positives = 65/169 (38%), Gaps = 4/169 (2%)
Query: 124 IPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTNQFSGRIPPQIGHLSYLK 183
+PS I +++ LDL S + L+ L L L NQ L+ L
Sbjct: 29 VPSGIPADTE--KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELG 86
Query: 184 ALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSEI-GNLKSLSGLELGYNKLSG 242
L L N L+ +LT L +YL N L S+PS + L L L L N+L
Sbjct: 87 TLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQS 145
Query: 243 SMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGS 291
+ L NL TL L N L +F L L + L N S
Sbjct: 146 IPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 44/137 (32%), Positives = 60/137 (43%), Gaps = 7/137 (5%)
Query: 179 LSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYN 238
L+ L L+L N L +LT L + L NN L+ +L L L LG N
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 117
Query: 239 KLSGSMPLSLGNLPNLATLDLHDNSLSGSIPL-SFGNLTNLDILNLPHNSLSGSIP---- 293
+L L L L L+ N L SIP +F LTNL L+L N L S+P
Sbjct: 118 QLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAF 175
Query: 294 SEMGNLKSLYGLGLSFN 310
+G L+++ G F+
Sbjct: 176 DRLGKLQTITLFGNQFD 192
Score = 36.6 bits (83), Expect = 0.074, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 61/156 (39%), Gaps = 2/156 (1%)
Query: 113 LDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTNQFSGRI 172
LDL+ + + + +KL +L+L N +L+ L L L+ NQ +
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLP 99
Query: 173 PPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPS-EIGNLKSLS 231
HL+ L L+L N L LT L + L N L SIP+ L +L
Sbjct: 100 LGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQ 158
Query: 232 GLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGS 267
L L N+L + L L T+ L N S
Sbjct: 159 TLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194
Score = 35.4 bits (80), Expect = 0.16, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 49/124 (39%), Gaps = 1/124 (0%)
Query: 590 EHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGE 649
E LDL S L+ + L KL +LNL NQ + L L L++N L
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS 97
Query: 650 EIPSQVCSMQSLEKLNLAHNNLSGFIPRCFKEMHGLVYIDISYNKLHGPIPNSAAFKHAP 709
+ L+KL L N L F + L + ++ N+L IP A K
Sbjct: 98 LPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQS-IPAGAFDKLTN 156
Query: 710 MEAL 713
++ L
Sbjct: 157 LQTL 160
Score = 34.7 bits (78), Expect = 0.27, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 2/153 (1%)
Query: 544 LDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSI 603
LDL S + + L L L L+ NQ L +L L L++N+L++
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLP 99
Query: 604 PGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIPSQVC-SMQSLE 662
G +L +L L L NQ ++ L +L L+ N L + IP+ + +L+
Sbjct: 100 LGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQL-QSIPAGAFDKLTNLQ 158
Query: 663 KLNLAHNNLSGFIPRCFKEMHGLVYIDISYNKL 695
L+L+ N L F + L I + N+
Sbjct: 159 TLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 34.3 bits (77), Expect = 0.39, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 45/113 (39%), Gaps = 1/113 (0%)
Query: 540 QLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRL 599
+L L+L N + L L L L NQ + L QL+ L L N+L
Sbjct: 60 KLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQL 119
Query: 600 SNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIP 652
+ G L KL L L+ NQ +K +L L LS N L + +P
Sbjct: 120 KSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQL-QSVP 171
Score = 34.3 bits (77), Expect = 0.44, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 57/141 (40%), Gaps = 12/141 (8%)
Query: 62 TLNNAT--KISPCAWFGIHCNHAGKVNS---INLTSAGLIG----TLHDFSFSSFPHLAY 112
TL++AT ++ W + N +++ +LT G +G L F HL
Sbjct: 49 TLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQ 108
Query: 113 LD---LRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTNQFS 169
LD L NQ+ + +KLK L L++N L+ L+ L LSTNQ
Sbjct: 109 LDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ 168
Query: 170 GRIPPQIGHLSYLKALHLFEN 190
L L+ + LF N
Sbjct: 169 SVPHGAFDRLGKLQTITLFGN 189
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 25/231 (10%)
Query: 806 NDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
NDF IG GG G VY + +G++ A+K + + LNE L+ +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 865 RN----IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT-QRMNVIKGVAD 919
+ + Y F + + SFI+ + + G L LS E +I G
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG--- 304
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL---KPDSSNWTELAGTIG 976
L ++HN +VYRD+ N+LLD +SD G++ KP +S GT G
Sbjct: 305 -LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHG 355
Query: 977 YVAPE-LAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDR 1026
Y+APE L + +D +S G + + ++G P F +DR
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP--FRQHKTKDKHEIDR 404
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And
Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In
Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 25/231 (10%)
Query: 806 NDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
NDF IG GG G VY + +G++ A+K + + LNE L+ +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 865 RN----IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT-QRMNVIKGVAD 919
+ + Y F + + SFI+ + + G L LS E +I G
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG--- 304
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL---KPDSSNWTELAGTIG 976
L ++HN +VYRD+ N+LLD +SD G++ KP +S GT G
Sbjct: 305 -LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHG 355
Query: 977 YVAPE-LAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDR 1026
Y+APE L + +D +S G + + ++G P F +DR
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP--FRQHKTKDKHEIDR 404
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 25/231 (10%)
Query: 806 NDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
NDF IG GG G VY + +G++ A+K + + LNE L+ +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 865 RN----IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT-QRMNVIKGVAD 919
+ + Y F + + SFI+ + + G L LS E +I G
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG--- 304
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSL---KPDSSNWTELAGTIG 976
L ++HN +VYRD+ N+LLD +SD G++ KP +S GT G
Sbjct: 305 -LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHG 355
Query: 977 YVAPE-LAYTMKVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNLDR 1026
Y+APE L + +D +S G + + ++G P F +DR
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP--FRQHKTKDKHEIDR 404
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen Synthase
Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen Synthase
Kinase-3 Inhibitors
Length = 424
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 808 FDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLN-EVKSLTEIRHR 865
+ + IG G G VY+A+L SGE+VA+KK +L + + F N E++ + ++ H
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQD----KRFKNRELQIMRKLDHC 111
Query: 866 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
NIV+ Y F S VY +Y+ + + + + L + +
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 171
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSDFGISKSLKPDSSNWTELAGTIGYV 978
+L+Y+H+ I +RDI +N+LLD + + DFG +K L N + + Y
Sbjct: 172 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 227
Query: 979 APELAY-TMKVTEKSDVYSFGVLALEAIKGK 1008
APEL + T DV+S G + E + G+
Sbjct: 228 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With Nms-869553a
Length = 422
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 808 FDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLN-EVKSLTEIRHR 865
+ + IG G G VY+A+L SGE+VA+KK +L + + F N E++ + ++ H
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQD----KRFKNRELQIMRKLDHC 109
Query: 866 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
NIV+ Y F S VY +Y+ + + + + L + +
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 169
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSDFGISKSLKPDSSNWTELAGTIGYV 978
+L+Y+H+ I +RDI +N+LLD + + DFG +K L N + + Y
Sbjct: 170 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 225
Query: 979 APELAY-TMKVTEKSDVYSFGVLALEAIKGK 1008
APEL + T DV+S G + E + G+
Sbjct: 226 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine
Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 20/228 (8%)
Query: 799 EEIVRATNDFDEEHCIGTGGQGSVYRAELSSGE----IVAVKKFHSPLLSEMTCQQEFLN 854
E+++ F +G G GSV A+L + VAVK + +++ + EFL
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIE-EFLR 74
Query: 855 EVKSLTEIRHRNIVKFYGFCSHARHS------FIVYEYLEMGSLAMILSNATSAEE---L 905
E + E H ++ K G +R ++ +++ G L L + E L
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 906 GWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDS 965
+ + +A + YL + F ++RD++++N +L + V+DFG+S+ +
Sbjct: 135 PLQTLVRFMVDIACGMEYLSSRNF---IHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 966 SNWTELAGT--IGYVAPELAYTMKVTEKSDVYSFGVLALEAI-KGKHP 1010
A + ++A E T SDV++FGV E + +G+ P
Sbjct: 192 YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGL 88
Query: 871 YGFCSHAR------HSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+ + +IV E ++ +L+ ++ E + + ++ + +L
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHERMSYLLYQMLV-----GIKHL 142
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ I++RD+ N+++ + + DFG++++ S T T Y APE+
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVIL 198
Query: 985 TMKVTEKSDVYSFGVLALEAIKG 1007
M E D++S GV+ E IKG
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I With
Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I With
Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I With
Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I With
Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 808 FDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLN-EVKSLTEIRHR 865
+ + IG G G VY+A+L SGE+VA+KK +L + + F N E++ + ++ H
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQD----KRFKNRELQIMRKLDHC 107
Query: 866 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
NIV+ Y F S VY +Y+ + + + + L + +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSDFGISKSLKPDSSNWTELAGTIGYV 978
+L+Y+H+ I +RDI +N+LLD + + DFG +K L N + + Y
Sbjct: 168 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 223
Query: 979 APELAY-TMKVTEKSDVYSFGVLALEAIKGK 1008
APEL + T DV+S G + E + G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 95/203 (46%), Gaps = 11/203 (5%)
Query: 802 VRATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLT 860
R T ++ +G G V R ++ +G+ A ++ LS Q+ E +
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARD-HQKLEREARICR 65
Query: 861 EIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADA 920
++H NIV+ + S H +++++ + G L + + E + I+ + +A
Sbjct: 66 LLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEA 122
Query: 921 LSYLHNDCFPPIVYRDISSKNVLLDLEYEA---HVSDFGISKSLKPDSSNWTELAGTIGY 977
+ + H +V+R++ +N+LL + + ++DFG++ ++ + W AGT GY
Sbjct: 123 VLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGY 179
Query: 978 VAPELAYTMKVTEKSDVYSFGVL 1000
++PE+ + D+++ GV+
Sbjct: 180 LSPEVLRKDPYGKPVDLWACGVI 202
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed
With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed
With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 808 FDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLN-EVKSLTEIRHR 865
+ + IG G G VY+A+L SGE+VA+KK +L + + F N E++ + ++ H
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQD----KRFKNRELQIMRKLDHC 101
Query: 866 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
NIV+ Y F S VY +Y+ + + + + L + +
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 161
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSDFGISKSLKPDSSNWTELAGTIGYV 978
+L+Y+H+ I +RDI +N+LLD + + DFG +K L N + + Y
Sbjct: 162 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 217
Query: 979 APELAY-TMKVTEKSDVYSFGVLALEAIKGK 1008
APEL + T DV+S G + E + G+
Sbjct: 218 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGL 88
Query: 871 YGFCSHAR------HSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+ + +IV E ++ +L+ ++ E + + ++ + +L
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHERMSYLLYQMLV-----GIKHL 142
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ I++RD+ N+++ + + DFG++++ S T T Y APE+
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVIL 198
Query: 985 TMKVTEKSDVYSFGVLALEAIKG 1007
M E D++S GV+ E IKG
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 53/204 (25%), Positives = 84/204 (41%), Gaps = 21/204 (10%)
Query: 814 IGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G G G V+R + +G AVKK + + E+ + + IV YG
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR--------VEELVACAGLSSPRIVPLYG 117
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
I E LE GSL ++ E + + + + L YLH I
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLHTR---RI 171
Query: 933 VYRDISSKNVLLDLE-YEAHVSDFGISKSLKPDSSNWTELAG-----TIGYVAPELAYTM 986
++ D+ + NVLL + A + DFG + L+PD + L G T ++APE+
Sbjct: 172 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 231
Query: 987 KVTEKSDVYSFGVLALEAIKGKHP 1010
K D++S + L + G HP
Sbjct: 232 PCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 53/204 (25%), Positives = 84/204 (41%), Gaps = 21/204 (10%)
Query: 814 IGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G G G V+R + +G AVKK + + E+ + + IV YG
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR--------VEELVACAGLSSPRIVPLYG 133
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
I E LE GSL ++ E + + + + L YLH I
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLHTR---RI 187
Query: 933 VYRDISSKNVLLDLE-YEAHVSDFGISKSLKPDSSNWTELAG-----TIGYVAPELAYTM 986
++ D+ + NVLL + A + DFG + L+PD + L G T ++APE+
Sbjct: 188 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 247
Query: 987 KVTEKSDVYSFGVLALEAIKGKHP 1010
K D++S + L + G HP
Sbjct: 248 PCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 22/217 (10%)
Query: 806 NDFDEEHCIGTGGQGSVYRAELSSGE-IVAVK---KFHSPLLSEMTCQQEFLNEVKSLTE 861
DF+ IG G G V ++ + E I A+K K+ +E C F E L
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETAC---FREERDVLVN 130
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSA--EELGWTQRMNVIKGVAD 919
+ I + H ++V +Y G L +LS E++ ++ + D
Sbjct: 131 GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI-D 189
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELA-GTIGYV 978
++ LH V+RDI NVLLD+ ++DFG + D + + +A GT Y+
Sbjct: 190 SIHQLH------YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYI 243
Query: 979 APELAYTM-----KVTEKSDVYSFGVLALEAIKGKHP 1010
+PE+ M K + D +S GV E + G+ P
Sbjct: 244 SPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 121/272 (44%), Gaps = 43/272 (15%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQ--QEFLNEVKSLTEIRHRN--IVK 869
IG+GG V++ +I A+K + L E Q + NE+ L +++ + I++
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVN---LEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 73
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAM--ILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
Y + ++ ++V +E G++ + L S + W +R + K + +A+ +H
Sbjct: 74 LYDYEITDQYIYMV---MECGNIDLNSWLKKKKSIDP--W-ERKSYWKNMLEAVHTIHQH 127
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTE--LAGTIGYVAPELAYT 985
IV+ D+ N L+ ++ + DFGI+ ++PD+++ + GT+ Y+ PE
Sbjct: 128 G---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 183
Query: 986 MKVTEKS-----------DVYSFGVLALEAIKGKHP-RDFISSICSTSSNLDRTLDEILD 1033
M + ++ DV+S G + GK P + I+ I L I+D
Sbjct: 184 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK--------LHAIID 235
Query: 1034 PRLPAPSCNIRDKLISIMEVAISCLDENPDSR 1065
P +I +K + +V CL +P R
Sbjct: 236 PNHEIEFPDIPEK--DLQDVLKCCLKRDPKQR 265
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 22/224 (9%)
Query: 799 EEIVRATNDFDEEHCIGTGGQGSVYRAELSSGE-IVAVK---KFHSPLLSEMTCQQEFLN 854
+E+ DF+ IG G G V ++ + E I A+K K+ +E C F
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETAC---FRE 139
Query: 855 EVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSA--EELGWTQRMN 912
E L + I + H ++V +Y G L +LS E++
Sbjct: 140 ERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGE 199
Query: 913 VIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELA 972
++ + D++ LH V+RDI NVLLD+ ++DFG + D + + +A
Sbjct: 200 MVLAI-DSIHQLH------YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA 252
Query: 973 -GTIGYVAPELAYTM-----KVTEKSDVYSFGVLALEAIKGKHP 1010
GT Y++PE+ M K + D +S GV E + G+ P
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 53/204 (25%), Positives = 84/204 (41%), Gaps = 21/204 (10%)
Query: 814 IGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
+G G G V+R + +G AVKK + + E+ + + IV YG
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR--------VEELVACAGLSSPRIVPLYG 131
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPI 932
I E LE GSL ++ E + + + + L YLH I
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLHTR---RI 185
Query: 933 VYRDISSKNVLLDLE-YEAHVSDFGISKSLKPDSSNWTELAG-----TIGYVAPELAYTM 986
++ D+ + NVLL + A + DFG + L+PD + L G T ++APE+
Sbjct: 186 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 245
Query: 987 KVTEKSDVYSFGVLALEAIKGKHP 1010
K D++S + L + G HP
Sbjct: 246 PCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 22/210 (10%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVK-----KFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
+G+G G V A E + + VA+K KF E E++ L ++ H I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSL-AMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
+K F A +IV E +E G L ++ N E T ++ + + A+ YLH
Sbjct: 78 IKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEA---TCKLYFYQMLL-AVQYLHE 132
Query: 927 DCFPPIVYRDISSKNVLLDLEYE---AHVSDFGISKSLKPDSSNWTELAGTIGYVAPELA 983
+ I++RD+ +NVLL + E ++DFG SK L ++S L GT Y+APE+
Sbjct: 133 N---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVL 188
Query: 984 Y---TMKVTEKSDVYSFGVLALEAIKGKHP 1010
T D +S GV+ + G P
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 22/210 (10%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVK-----KFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
+G+G G V A E + + VA+K KF E E++ L ++ H I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSL-AMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
+K F A +IV E +E G L ++ N E T ++ + + A+ YLH
Sbjct: 78 IKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEA---TCKLYFYQMLL-AVQYLHE 132
Query: 927 DCFPPIVYRDISSKNVLLDLEYE---AHVSDFGISKSLKPDSSNWTELAGTIGYVAPELA 983
+ I++RD+ +NVLL + E ++DFG SK L ++S L GT Y+APE+
Sbjct: 133 N---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVL 188
Query: 984 Y---TMKVTEKSDVYSFGVLALEAIKGKHP 1010
T D +S GV+ + G P
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex
With Inhibitor Pv1533
Length = 322
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 22/210 (10%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVK-----KFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
+G+G G V A E + + VA+K KF E E++ L ++ H I
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSL-AMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
+K F A +IV E +E G L ++ N E T ++ + + A+ YLH
Sbjct: 77 IKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEA---TCKLYFYQMLL-AVQYLHE 131
Query: 927 DCFPPIVYRDISSKNVLLDLEYE---AHVSDFGISKSLKPDSSNWTELAGTIGYVAPELA 983
+ I++RD+ +NVLL + E ++DFG SK L ++S L GT Y+APE+
Sbjct: 132 N---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVL 187
Query: 984 Y---TMKVTEKSDVYSFGVLALEAIKGKHP 1010
T D +S GV+ + G P
Sbjct: 188 VSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And Potentiation
Of Cytotoxic Drugs By Novel Chk2 Inhibitor Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 22/210 (10%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVK-----KFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
+G+G G V A E + + VA+K KF E E++ L ++ H I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSL-AMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
+K F A +IV E +E G L ++ N E T ++ + + A+ YLH
Sbjct: 78 IKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEA---TCKLYFYQMLL-AVQYLHE 132
Query: 927 DCFPPIVYRDISSKNVLLDLEYE---AHVSDFGISKSLKPDSSNWTELAGTIGYVAPELA 983
+ I++RD+ +NVLL + E ++DFG SK L ++S L GT Y+APE+
Sbjct: 133 N---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVL 188
Query: 984 Y---TMKVTEKSDVYSFGVLALEAIKGKHP 1010
T D +S GV+ + G P
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound To
The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 22/210 (10%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVK-----KFHSPLLSEMTCQQEFLNEVKSLTEIRHRNI 867
+G+G G V A E + + VA+K KF E E++ L ++ H I
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 868 VKFYGFCSHARHSFIVYEYLEMGSL-AMILSNATSAEELGWTQRMNVIKGVADALSYLHN 926
+K F A +IV E +E G L ++ N E T ++ + + A+ YLH
Sbjct: 84 IKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEA---TCKLYFYQMLL-AVQYLHE 138
Query: 927 DCFPPIVYRDISSKNVLLDLEYE---AHVSDFGISKSLKPDSSNWTELAGTIGYVAPELA 983
+ I++RD+ +NVLL + E ++DFG SK L ++S L GT Y+APE+
Sbjct: 139 N---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVL 194
Query: 984 Y---TMKVTEKSDVYSFGVLALEAIKGKHP 1010
T D +S GV+ + G P
Sbjct: 195 VSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With
Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With
Gold
Length = 362
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 87/202 (43%), Gaps = 17/202 (8%)
Query: 814 IGTGGQG-SVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG+G G + + S E+VAVK + ++E +N +RH NIV+F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH----RSLRHPNIVRFKE 82
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATS-AEELGWTQRMNVIKGVADALSYLHNDCFPP 931
H IV EY G L + NA +E+ +I GV SY H
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV----SYCHA---MQ 135
Query: 932 IVYRDISSKNVLLD--LEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVT 989
+ +RD+ +N LLD + FG SKS S + GT Y+APE+ +
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKS-SVLHSQPKDTVGTPAYIAPEVLLKKEYD 194
Query: 990 EK-SDVYSFGVLALEAIKGKHP 1010
K +DV+S GV + G +P
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYP 216
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 98/226 (43%), Gaps = 34/226 (15%)
Query: 799 EEIVRATNDFDEEHCIGTGGQGSVYRAELSSGE--IVAVKKFHSPLLSEM---------- 846
+E + ND+ I T QG + L + A+KK+ LL +
Sbjct: 24 KEKDKYINDY---RIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDK 80
Query: 847 ----TCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLA-------MI 895
+ +F NE++ +T+I++ + G ++ +I+YEY+E S+ ++
Sbjct: 81 ISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVL 140
Query: 896 LSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDF 955
N T + + +IK V ++ SY+HN+ I +RD+ N+L+D +SDF
Sbjct: 141 DKNYTCFIPIQVIK--CIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDF 196
Query: 956 GISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTE--KSDVYSFGV 999
G S+ + + GT ++ PE K D++S G+
Sbjct: 197 GESEYMVDKKIKGSR--GTYEFMPPEFFSNESSYNGAKVDIWSLGI 240
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 96/211 (45%), Gaps = 27/211 (12%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGF 873
+G G +G++ + VAVK+ S + + L E H N++++ F
Sbjct: 32 LGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDE-----HPNVIRY--F 84
Query: 874 CSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT--QRMNVIKGVADALSYLHNDCFPP 931
C+ F +Y+ + A L ++ + + +++ L++LH+
Sbjct: 85 CTEKDRQF---QYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS---LN 138
Query: 932 IVYRDISSKNVLLDL-----EYEAHVSDFGISKSL---KPDSSNWTELAGTIGYVAPE-L 982
IV+RD+ N+L+ + + +A +SDFG+ K L + S + + GT G++APE L
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEML 198
Query: 983 AYTMKV--TEKSDVYSFGVLALEAI-KGKHP 1010
+ K T D++S G + I +G HP
Sbjct: 199 SEDCKENPTYTVDIFSAGCVFYYVISEGSHP 229
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 49.7 bits (117), Expect = 1e-05, Method: Composition-based stats.
Identities = 52/187 (27%), Positives = 93/187 (49%), Gaps = 30/187 (16%)
Query: 814 IGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQE-----FLNEVKSLTEIRHRNI 867
IG G G V++A +G+ VA+KK M ++E L E+K L ++H N+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVL------MENEKEGFPITALREIKILQLLKHENV 79
Query: 868 VKFYGFC-------SHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
V C + + S ++V+++ E LA +LSN L +R V++ + +
Sbjct: 80 VNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLN 136
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISK--SLKPDS--SNWTELAGTI 975
L Y+H + I++RD+ + NVL+ + ++DFG+++ SL +S + + T+
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 976 GYVAPEL 982
Y PEL
Sbjct: 194 WYRPPEL 200
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 89/206 (43%), Gaps = 25/206 (12%)
Query: 814 IGTGGQG-SVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG+G G + + S E+VAVK + ++E +N +RH NIV+F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH----RSLRHPNIVRFKE 82
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATS-AEELGWTQRMNVIKGVADALSYLHNDCFPP 931
H IV EY G L + NA +E+ +I GV SY H
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV----SYCHA---MQ 135
Query: 932 IVYRDISSKNVLLD--LEYEAHVSDFGISKS----LKPDSSNWTELAGTIGYVAPELAYT 985
+ +RD+ +N LLD + FG SKS +P S+ GT Y+APE+
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST-----VGTPAYIAPEVLLK 190
Query: 986 MKVTEK-SDVYSFGVLALEAIKGKHP 1010
+ K +DV+S GV + G +P
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 206 LAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLS 265
L +YL NSL+ +P+EI NL +L L+L +N+L+ S+P LG+ L DN ++
Sbjct: 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT 306
Query: 266 GSIPLSFGNLTNLDILNLPHNSLS 289
++P FGNL NL L + N L
Sbjct: 307 -TLPWEFGNLCNLQFLGVEGNPLE 329
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 14/120 (11%)
Query: 254 LATLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMG---NLKSLYGLGLSFN 310
L L L+ NSL+ +P NL+NL +L+L HN L+ S+P+E+G LK Y F+
Sbjct: 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFY----FFD 302
Query: 311 KLSGSIPSSLGNLTKLTILYLSDNLL---FGSIPCEIGNLRYLFYLELGDNKLSGSIPHS 367
+ ++P GNL L L + N L F I E +FYL DN+ +PH
Sbjct: 303 NMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLR--DNRPEIPLPHE 360
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 28/145 (19%)
Query: 326 LTILYLSDNLLFGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLS 385
LT LYL+ N L +P EI NL L L+L N+L+ S+P LG+ L Y F N+++
Sbjct: 249 LTRLYLNGNSL-TELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT 306
Query: 386 GSIPSEIXXXXXXXXXXXXXXXXXXXIPYSFGNLTNMIVLSIYSNALSGAIPKEYGNL-V 444
+P+ FGNL N+ L + N L K V
Sbjct: 307 -------------------------TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSV 341
Query: 445 KLTLLVLSYNQLQGPIPDLRNLTRL 469
+ L N+ + P+P R +
Sbjct: 342 TGLIFYLRDNRPEIPLPHERRFIEI 366
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 530 ILPPEIGDSPQL-KVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQ 588
++P + QL LDLS+ I I + + K L +L LN N + +LP E+ +L
Sbjct: 214 VMPKDSKYDDQLWHALDLSNLQIFN-ISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSN 271
Query: 589 LEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNN 621
L LDLS NRL+ S+P LG+ +L Y +N
Sbjct: 272 LRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDN 303
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 52/159 (32%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Query: 194 GSIPPSLGNLTNLAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSL-GNLP 252
S+P G TN I+YL++N ++ P +L +L L LG N+L G++P+ + +L
Sbjct: 32 ASVPA--GIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLT 88
Query: 253 NLATLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKL 312
L LDL N L+ F L +L L + N L+ +P + L L L L N+L
Sbjct: 89 QLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQL 147
Query: 313 SGSIP-SSLGNLTKLTILYLSDNLLFGSIPCEIGNLRYL 350
SIP + L+ LT YL N CE ++ YL
Sbjct: 148 K-SIPHGAFDRLSSLTHAYLFGN----PWDCECRDIMYL 181
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Query: 568 LTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEI 627
L L+ NQ + P SLI L+ L L SN+L G +L +L L+L NQ +
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLP 104
Query: 628 PIKLEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCFKEMHGLVY 687
++ +HL +L + N L E+P + + L L L N L F + L +
Sbjct: 105 SAVFDRLVHLKELFMCCNKL-TELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTH 163
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 542 KVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTEL-GSLIQLEHLDLSSNRLS 600
++L L N I P L +L +L L NQ G LP + SL QL LDL +N+L+
Sbjct: 43 QILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLT 101
Query: 601 NSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIP 652
LV L L + N+ + E+P +E+ HL+ L L N L + IP
Sbjct: 102 VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQL-KSIP 151
Score = 40.0 bits (92), Expect = 0.008, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 69/168 (41%), Gaps = 31/168 (18%)
Query: 338 GSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGSIPSEIXXXXX 397
S+P I + YL DN+++ P +L NL LYL +N L G++P +
Sbjct: 32 ASVPAGIPTNAQILYLH--DNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGV----- 83
Query: 398 XXXXXXXXXXXXXXIPYSFGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQ 457
F +LT + VL + +N L+ + LV L L + N+L
Sbjct: 84 ------------------FDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT 125
Query: 458 GPIPDLRNLTRLARVRLDRNHLTGNISESFGIHSNLSYINLSHKKFYG 505
+ LT L + LD+N L S G LS +L+H +G
Sbjct: 126 ELPRGIERLTHLTHLALDQNQLK---SIPHGAFDRLS--SLTHAYLFG 168
Score = 38.9 bits (89), Expect = 0.016, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Query: 516 NLGTLDVSANNITGILPPEIGDS-PQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQ 574
NL L + +N + G LP + DS QL VLDL +N + + +L L +L + N+
Sbjct: 65 NLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNK 123
Query: 575 FSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGE 626
+ +LP + L L HL L N+L + G+ L L + L N + E
Sbjct: 124 LT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174
Score = 38.5 bits (88), Expect = 0.021, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 7/123 (5%)
Query: 159 KILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSL-GNLTNLAIMYLYNNSLS 217
+ILYL NQ + P L LK L+L N L G++P + +LT L ++ L N L+
Sbjct: 43 QILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLT 101
Query: 218 GSIPSEI-GNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPL-SFGNL 275
+PS + L L L + NKL+ +P + L +L L L N L SIP +F L
Sbjct: 102 -VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-SIPHGAFDRL 158
Query: 276 TNL 278
++L
Sbjct: 159 SSL 161
Score = 37.0 bits (84), Expect = 0.056, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 27/132 (20%)
Query: 276 TNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSL-GNLTKLTILYLSDN 334
TN IL L N ++ P +L +L L L N+L G++P + +LT+LT+L L N
Sbjct: 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTN 98
Query: 335 LL-----------------------FGSIPCEIGNLRYLFYLELGDNKLSGSIPH-SLGN 370
L +P I L +L +L L N+L SIPH +
Sbjct: 99 QLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLK-SIPHGAFDR 157
Query: 371 LTNLATLYLFTN 382
L++L YLF N
Sbjct: 158 LSSLTHAYLFGN 169
Score = 37.0 bits (84), Expect = 0.063, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
Query: 113 LDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQI-GNLSMLKILYLSTNQFSGR 171
L L NQI + P + LK L L SN G +P + +L+ L +L L TNQ +
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVL 103
Query: 172 IPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSEIGNLKSLS 231
L +LK L + N L+ +P + LT+L + L N L SIP G LS
Sbjct: 104 PSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-SIPH--GAFDRLS 159
Query: 232 GLELGY 237
L Y
Sbjct: 160 SLTHAY 165
Score = 36.2 bits (82), Expect = 0.11, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Query: 104 FSSFPHLAYLDLRVNQIFGIIPSQIANN-SKLKYLDLSSNSFSGTIPPQIGNLSMLKILY 162
F S +L L L NQ+ G +P + ++ ++L LDL +N + L LK L+
Sbjct: 60 FDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELF 118
Query: 163 LSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIP-PSLGNLTNLAIMYLYNN 214
+ N+ + +P I L++L L L +N L SIP + L++L YL+ N
Sbjct: 119 MCCNKLT-ELPRGIERLTHLTHLALDQNQLK-SIPHGAFDRLSSLTHAYLFGN 169
Score = 34.3 bits (77), Expect = 0.34, Method: Composition-based stats.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 310 NKLSGSIPSSLGNLTKLTILYLSDNLLFGSIPCEIGNLRYLFYLELGDNKLSGSIPHSL- 368
+K S+P+ G T ILYL DN + P +L L L LG N+L G++P +
Sbjct: 28 SKRHASVPA--GIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVF 84
Query: 369 GNLTNLATLYLFTNLLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPYSFGNLTNMIVLSIY 428
+LT L L L TN L+ +PS + +P LT++ L++
Sbjct: 85 DSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALD 143
Query: 429 SNALSGAIPKEYGNLVKLTLLVLSY 453
N L +IP +G +L+ L +Y
Sbjct: 144 QNQLK-SIP--HGAFDRLSSLTHAY 165
Score = 33.9 bits (76), Expect = 0.54, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 516 NLGTLDVSANNITGILPPEIGDSPQLKVLDLSSNHIVGEIPSELGKLRSLIKLT---LNR 572
N L + N IT + P LK L L SN + G +P +G SL +LT L
Sbjct: 41 NAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALP--VGVFDSLTQLTVLDLGT 97
Query: 573 NQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQF 623
NQ + L+ L+ L + N+L+ +P + L L +L L NQ
Sbjct: 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQL 147
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 52/187 (27%), Positives = 93/187 (49%), Gaps = 30/187 (16%)
Query: 814 IGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQE-----FLNEVKSLTEIRHRNI 867
IG G G V++A +G+ VA+KK M ++E L E+K L ++H N+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVL------MENEKEGFPITALREIKILQLLKHENV 78
Query: 868 VKFYGFC-------SHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
V C + + S ++V+++ E LA +LSN L +R V++ + +
Sbjct: 79 VNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLN 135
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISK--SLKPDS--SNWTELAGTI 975
L Y+H + I++RD+ + NVL+ + ++DFG+++ SL +S + + T+
Sbjct: 136 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 192
Query: 976 GYVAPEL 982
Y PEL
Sbjct: 193 WYRPPEL 199
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 52/187 (27%), Positives = 93/187 (49%), Gaps = 30/187 (16%)
Query: 814 IGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQE-----FLNEVKSLTEIRHRNI 867
IG G G V++A +G+ VA+KK M ++E L E+K L ++H N+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVL------MENEKEGFPITALREIKILQLLKHENV 79
Query: 868 VKFYGFC-------SHARHS-FIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
V C + + S ++V+++ E LA +LSN L +R V++ + +
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLN 136
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISK--SLKPDS--SNWTELAGTI 975
L Y+H + I++RD+ + NVL+ + ++DFG+++ SL +S + + T+
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 976 GYVAPEL 982
Y PEL
Sbjct: 194 WYRPPEL 200
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 30/187 (16%)
Query: 814 IGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQE-----FLNEVKSLTEIRHRNI 867
IG G G V++A +G+ VA+KK M ++E L E+K L ++H N+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVL------MENEKEGFPITALREIKILQLLKHENV 79
Query: 868 VKFYGFCSHARHSF--------IVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
V C + +V+++ E LA +LSN L +R V++ + +
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKR--VMQMLLN 136
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISK--SLKPDSS--NWTELAGTI 975
L Y+H + I++RD+ + NVL+ + ++DFG+++ SL +S + T+
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 976 GYVAPEL 982
Y PEL
Sbjct: 194 WYRPPEL 200
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 121/272 (44%), Gaps = 43/272 (15%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQ--QEFLNEVKSLTEIRHRN--IVK 869
IG+GG V++ +I A+K + L E Q + NE+ L +++ + I++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVN---LEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 120
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAM--ILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
Y + ++ ++V +E G++ + L S + W +R + K + +A+ +H
Sbjct: 121 LYDYEITDQYIYMV---MECGNIDLNSWLKKKKSIDP--W-ERKSYWKNMLEAVHTIHQH 174
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTE--LAGTIGYVAPELAYT 985
IV+ D+ N L+ ++ + DFGI+ ++PD+++ + GT+ Y+ PE
Sbjct: 175 G---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 986 MKVTEKS-----------DVYSFGVLALEAIKGKHP-RDFISSICSTSSNLDRTLDEILD 1033
M + ++ DV+S G + GK P + I+ I L I+D
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK--------LHAIID 282
Query: 1034 PRLPAPSCNIRDKLISIMEVAISCLDENPDSR 1065
P +I +K + +V CL +P R
Sbjct: 283 PNHEIEFPDIPEK--DLQDVLKCCLKRDPKQR 312
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 24/234 (10%)
Query: 790 LTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVK-----KFHSPLL 843
LT D + Y + +R +++ +G+G G V A E + + VA++ KF
Sbjct: 135 LTVDDQSVYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSA 192
Query: 844 SEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSL-AMILSNATSA 902
E E++ L ++ H I+K F A +IV E +E G L ++ N
Sbjct: 193 READPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLK 251
Query: 903 EELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYE---AHVSDFGISK 959
E T ++ + + A+ YLH + I++RD+ +NVLL + E ++DFG SK
Sbjct: 252 EA---TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 304
Query: 960 SLKPDSSNWTELAGTIGYVAPELAY---TMKVTEKSDVYSFGVLALEAIKGKHP 1010
L ++S L GT Y+APE+ T D +S GV+ + G P
Sbjct: 305 ILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 22/217 (10%)
Query: 806 NDFDEEHCIGTGGQGSVYRAELSSGE-IVAVK---KFHSPLLSEMTCQQEFLNEVKSLTE 861
DF+ IG G G V +L + + + A+K K+ +E C F E L
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETAC---FREERDVLVN 130
Query: 862 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSA--EELGWTQRMNVIKGVAD 919
+ I + + ++V +Y G L +LS EE+ ++ + D
Sbjct: 131 GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAI-D 189
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELA-GTIGYV 978
++ LH V+RDI N+L+D+ ++DFG L D + + +A GT Y+
Sbjct: 190 SVHQLH------YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYI 243
Query: 979 APELAYTM-----KVTEKSDVYSFGVLALEAIKGKHP 1010
+PE+ M + + D +S GV E + G+ P
Sbjct: 244 SPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 96/240 (40%), Gaps = 21/240 (8%)
Query: 798 YEEIVRA-------TNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQ 850
YE+IV+ D+D IG G G V + + V K S
Sbjct: 60 YEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDS 119
Query: 851 EFLNEVKSLTEIRHRN-IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQ 909
F E + + + +V+ + ++ ++V EY+ G L ++SN E+ W +
Sbjct: 120 AFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK--WAK 177
Query: 910 RMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT 969
V AL +H+ +++RD+ N+LLD ++DFG +
Sbjct: 178 FYTA--EVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHC 232
Query: 970 ELA-GTIGYVAPELAYTMK----VTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNL 1024
+ A GT Y++PE+ + + D +S GV E + G P + S+ T S +
Sbjct: 233 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF-YADSLVGTYSKI 291
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 127/293 (43%), Gaps = 33/293 (11%)
Query: 113 LDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTNQFSGRI 172
++L+ + F I + S L+ LDL++ S +P + LS LK L LS N+F
Sbjct: 259 INLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLC 317
Query: 173 P------PQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPS--EI 224
P + HLS E G L NL NL + L ++ + S ++
Sbjct: 318 QISASNFPSLTHLSIKGNTKRLELGTG-----CLENLENLRELDLSHDDIETSDCCNLQL 372
Query: 225 GNLKSLSGLELGYNKLSGSMPLSLGN-----LPNLATLDLHDNSLSGSIPLS-FGNLTNL 278
NL L L L YN+ PLSL P L LDL L S F NL L
Sbjct: 373 RNLSHLQSLNLSYNE-----PLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLL 427
Query: 279 DILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKL-SGSI--PSSLGNLTKLTILYLSDNL 335
+LNL H+ L S L +L L L N G+I +SL L +L IL LS
Sbjct: 428 KVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCD 487
Query: 336 LFGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGSI 388
L +L+ + +++L N+L+ S S+ L++L +YL NL S I
Sbjct: 488 LSSIDQHAFTSLKMMNHVDLSHNRLTSS---SIEALSHLKGIYL--NLASNHI 535
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 577 GQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPIK-LEKFI 635
+LP+ L L L+ L LS+N+ N S N L +L++ N E+ LE
Sbjct: 291 SELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLE 350
Query: 636 HLSDLDLSHNFLGEEIPSQVCSMQ-----SLEKLNLAHNNLSGFIPRCFKEMHGLVYIDI 690
+L +LDLSH+ + S C++Q L+ LNL++N FKE L +D+
Sbjct: 351 NLRELDLSHDDIE---TSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDL 407
Query: 691 SYNKL 695
++ +L
Sbjct: 408 AFTRL 412
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 9/172 (5%)
Query: 463 LRNLTRLARVRLDRNHLTGNISESFGIHSNLSYINLSHKKFYGEISFDWGKFPNLGTLDV 522
LRNL+ L + L N +E+F L ++L+ + ++ F NL L V
Sbjct: 372 LRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRL--KVKDAQSPFQNLHLLKV 429
Query: 523 S--ANNITGILPPEIGDS-PQLKVLDLSSNHI-VGEIP--SELGKLRSLIKLTLNRNQFS 576
++++ I ++ D P L+ L+L NH G I + L L L L L+ S
Sbjct: 430 LNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLS 489
Query: 577 GQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIP 628
SL + H+DLS NRL++S +L +L K YLNL++N S +P
Sbjct: 490 SIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHL-KGIYLNLASNHISIILP 540
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 94/238 (39%), Gaps = 16/238 (6%)
Query: 469 LARVRLDRNHLTGNISESFGIHSNLSYINLSHKKFYGEISFDWGKFPNLGTLDVSANNI- 527
L + L HL+ S G+ S L + LS KF FP+L L + N
Sbjct: 280 LQELDLTATHLSELPSGLVGL-STLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKR 338
Query: 528 ----TGILPPEIGDSPQLKVLDLSSNHIVGEIPS--ELGKLRSLIKLTLNRNQFSGQLPT 581
TG L + L+ LDLS + I +L L L L L+ N+
Sbjct: 339 LELGTGCLE----NLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTE 394
Query: 582 ELGSLIQLEHLDLSSNRLS-NSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDL 640
QLE LDL+ RL NL L LNLS++ + L L
Sbjct: 395 AFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHL 454
Query: 641 DLSHNFLGEEIPSQVCSMQSLEKLN---LAHNNLSGFIPRCFKEMHGLVYIDISYNKL 695
+L N + + S+Q+L +L L+ +LS F + + ++D+S+N+L
Sbjct: 455 NLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRL 512
Score = 31.2 bits (69), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 123/326 (37%), Gaps = 61/326 (18%)
Query: 412 IPYSFGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQGPIPDLRNLTRLAR 471
IP + N T + S N L + L+ LT L L+ Q+ D T ++
Sbjct: 27 IPGTLPNSTECLEFSF--NVLPTIQNTTFSRLINLTFLDLTRCQIYWIHED----TFQSQ 80
Query: 472 VRLDRNHLTGNISESFGIHSNLSYINLSHKKFY---GEISFDWGKFPNLGTLD---VSAN 525
RLD LT N F + LS F+ G S D+ N TL+ + +N
Sbjct: 81 HRLDTLVLTAN-PLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSN 139
Query: 526 NITGILPPEIGDSPQLKVLDLSSNHIVGEIPSELGKLRSL--IKLTLNRNQFSGQLPTEL 583
+I+ I P+ + +LKVLD +N I ++ L+ + L LN N +G P
Sbjct: 140 HISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAF 199
Query: 584 GSLIQLEHLDLSSNR--------LSNSIPGSLG--------------------------- 608
S + + L+ + L NS SL
Sbjct: 200 DSAV-FQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVES 258
Query: 609 -NLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLA 667
NL K Y+ N+S+N F F L +LDL+ L E+PS + + +L+KL L+
Sbjct: 259 INLQKHYFFNISSNTFHC--------FSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLS 309
Query: 668 HNNLSGFIPRCFKEMHGLVYIDISYN 693
N L ++ I N
Sbjct: 310 ANKFENLCQISASNFPSLTHLSIKGN 335
Score = 29.6 bits (65), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 32/186 (17%)
Query: 92 SAGLIGTLHDFSFSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQ 151
S ++ T+ + +FS +L +LDL QI+ I + +L L L++N
Sbjct: 41 SFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTAN--------- 91
Query: 152 IGNLSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYL 211
+++++ SG P + HL +++ G+S L N L +YL
Sbjct: 92 -------PLIFMAETALSG--PKALKHLFFIQT------GISSIDFIPLHNQKTLESLYL 136
Query: 212 YNNSLSG-----SIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSG 266
+N +S P+E LK L + LS SL NL+ L+L+ N ++G
Sbjct: 137 GSNHISSIKLPKGFPTE--KLKVLDFQNNAIHYLSKEDMSSLQQATNLS-LNLNGNDIAG 193
Query: 267 SIPLSF 272
P +F
Sbjct: 194 IEPGAF 199
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 63/278 (22%), Positives = 124/278 (44%), Gaps = 43/278 (15%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQ--QEFLNEVKSLTEIRHRN--IVK 869
IG+GG V++ +I A+K + L E Q + NE+ L +++ + I++
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVN---LEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 72
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAM--ILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
Y + ++ +Y +E G++ + L S + W +R + K + +A+ +H
Sbjct: 73 LYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDP--W-ERKSYWKNMLEAVHTIHQH 126
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTE--LAGTIGYVAPELAYT 985
IV+ D+ N L+ ++ + DFGI+ ++PD+++ + GT+ Y+ PE
Sbjct: 127 ---GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 182
Query: 986 MKVTEKS-----------DVYSFGVLALEAIKGKHP-RDFISSICSTSSNLDRTLDEILD 1033
M + ++ DV+S G + GK P + I+ I L I+D
Sbjct: 183 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK--------LHAIID 234
Query: 1034 PRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P +I +K + +V CL +P R ++ ++
Sbjct: 235 PNHEIEFPDIPEK--DLQDVLKCCLKRDPKQRISIPEL 270
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With A Quinazolin Ligand Compound 4
Length = 342
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 63/278 (22%), Positives = 124/278 (44%), Gaps = 43/278 (15%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQ--QEFLNEVKSLTEIRHRN--IVK 869
IG+GG V++ +I A+K + L E Q + NE+ L +++ + I++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVN---LEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 120
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAM--ILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
Y + ++ +Y +E G++ + L S + W +R + K + +A+ +H
Sbjct: 121 LYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDP--W-ERKSYWKNMLEAVHTIHQH 174
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTE--LAGTIGYVAPELAYT 985
IV+ D+ N L+ ++ + DFGI+ ++PD+++ + GT+ Y+ PE
Sbjct: 175 ---GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 986 MKVTEKS-----------DVYSFGVLALEAIKGKHP-RDFISSICSTSSNLDRTLDEILD 1033
M + ++ DV+S G + GK P + I+ I L I+D
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK--------LHAIID 282
Query: 1034 PRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P +I +K + +V CL +P R ++ ++
Sbjct: 283 PNHEIEFPDIPEK--DLQDVLKCCLKRDPKQRISIPEL 318
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 808 FDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLN-EVKSLTEIRHR 865
+ + IG G G VY+A+L SGE+VA+KK + + F N E++ + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 73
Query: 866 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
NIV+ Y F S VY +Y+ + + + + L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSDFGISKSLKPDSSNWTELAGTIGYV 978
+L+Y+H+ I +RDI +N+LLD + + DFG +K L N + + Y
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 189
Query: 979 APELAY-TMKVTEKSDVYSFGVLALEAIKGK 1008
APEL + T DV+S G + E + G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 96/227 (42%), Gaps = 20/227 (8%)
Query: 796 IAYEEIVRATNDFDEEHCIGTGGQGSVYRAEL-SSGEIVAVK---KFHSPLLSEMTCQQE 851
+ +E+ +DF+ IG G V ++ +G++ A+K K+ E++C
Sbjct: 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSC--- 107
Query: 852 FLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRM 911
F E L R I + + + ++V EY G L +LS E +
Sbjct: 108 FREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKF--GERIPAEMAR 165
Query: 912 NVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTEL 971
+ + A+ +H + V+RDI N+LLD ++DFG L+ D + + +
Sbjct: 166 FYLAEIVMAIDSVHRLGY---VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLV 222
Query: 972 A-GTIGYVAPELAYTMKVTE-------KSDVYSFGVLALEAIKGKHP 1010
A GT Y++PE+ + + D ++ GV A E G+ P
Sbjct: 223 AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta
In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta
In Complex With An Inhibitor
Length = 350
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 808 FDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLN-EVKSLTEIRHR 865
+ + IG G G VY+A+L SGE+VA+KK + + F N E++ + ++ H
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 74
Query: 866 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
NIV+ Y F S VY +Y+ + + + + L + +
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 134
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSDFGISKSLKPDSSNWTELAGTIGYV 978
+L+Y+H+ I +RDI +N+LLD + + DFG +K L N + + Y
Sbjct: 135 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 190
Query: 979 APELAY-TMKVTEKSDVYSFGVLALEAIKGK 1008
APEL + T DV+S G + E + G+
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 808 FDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLN-EVKSLTEIRHR 865
+ + IG G G VY+A+L SGE+VA+KK + + F N E++ + ++ H
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 77
Query: 866 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
NIV+ Y F S VY +Y+ + + + + L + +
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 137
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSDFGISKSLKPDSSNWTELAGTIGYV 978
+L+Y+H+ I +RDI +N+LLD + + DFG +K L N + + Y
Sbjct: 138 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 193
Query: 979 APELAY-TMKVTEKSDVYSFGVLALEAIKGK 1008
APEL + T DV+S G + E + G+
Sbjct: 194 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide
Length = 350
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 808 FDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLN-EVKSLTEIRHR 865
+ + IG G G VY+A+L SGE+VA+KK + + F N E++ + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQGKAFKNRELQIMRKLDHC 73
Query: 866 NIVKF-YGFCSHARHSFIVYEYLEMGSL-AMILSNATSAEELGWTQRMNVIK----GVAD 919
NIV+ Y F S VY L + + A + A T + +K +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSDFGISKSLKPDSSNWTELAGTIGYV 978
+L+Y+H+ I +RDI +N+LLD + + DFG +K L N + + Y
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 189
Query: 979 APELAY-TMKVTEKSDVYSFGVLALEAIKGK 1008
APEL + T DV+S G + E + G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide
And Inhibitor 7d
Length = 350
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 808 FDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLN-EVKSLTEIRHR 865
+ + IG G G VY+A+L SGE+VA+KK + + F N E++ + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 73
Query: 866 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
NIV+ Y F S VY +Y+ + + + + L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSDFGISKSLKPDSSNWTELAGTIGYV 978
+L+Y+H+ I +RDI +N+LLD + + DFG +K L N + + Y
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 189
Query: 979 APELAY-TMKVTEKSDVYSFGVLALEAIKGK 1008
APEL + T DV+S G + E + G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 24/234 (10%)
Query: 790 LTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVK-----KFHSPLL 843
LT D + Y + +R +++ +G+G G V A E + + VA++ KF
Sbjct: 121 LTVDDQSVYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSA 178
Query: 844 SEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSL-AMILSNATSA 902
E E++ L ++ H I+K F A +IV E +E G L ++ N
Sbjct: 179 READPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLK 237
Query: 903 EELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEA---HVSDFGISK 959
E T ++ + + A+ YLH + I++RD+ +NVLL + E ++DFG SK
Sbjct: 238 EA---TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290
Query: 960 SLKPDSSNWTELAGTIGYVAPELAY---TMKVTEKSDVYSFGVLALEAIKGKHP 1010
L ++S L GT Y+APE+ T D +S GV+ + G P
Sbjct: 291 ILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGL 88
Query: 871 YGFCSHAR------HSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+ + +IV E ++ +L+ ++ E + + ++ + +L
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHERMSYLLYQMLV-----GIKHL 142
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ I++RD+ N+++ + + DFG++++ S T T Y APE+
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVIL 198
Query: 985 TMKVTEKSDVYSFGVLALEAIKG 1007
M E D++S G + E IKG
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From The
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From The
Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/200 (23%), Positives = 95/200 (47%), Gaps = 11/200 (5%)
Query: 814 IGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG G G+V++A+ + EIVA+K+ E L E+ L E++H+NIV+ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-GVPSSALREICLLKELKHKNIVRLHD 68
Query: 873 FCSHARHSFIVYEYLEMGSLAMILS-NATSAEELGWTQRMNVIKGVADALSYLHNDCFPP 931
+ +V+E+ + S N E+ + ++KG L + H+
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKG----LGFCHSR---N 121
Query: 932 IVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEK 991
+++RD+ +N+L++ E +++FG++++ ++ T+ Y P++ + K+
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 992 S-DVYSFGVLALEAIKGKHP 1010
S D++S G + E P
Sbjct: 182 SIDMWSAGCIFAELANAGRP 201
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel
Pyrrolopyrimidine Inhibitor
Length = 359
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 13/146 (8%)
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSL--KPDSSNWTELAGTIGYVAPELAYTMKVTE 990
++RD++++N+LL + + DFG+++ + PD + + ++APE + T
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 274
Query: 991 KSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLIS 1049
+SDV+SFGVL E G P + R L E R+ AP +
Sbjct: 275 QSDVWSFGVLLWEIFSLGASPYPGV----KIDEEFCRRLKE--GTRMRAPDYTTPE---- 324
Query: 1050 IMEVAISCLDENPDSRPTMQKVSQLL 1075
+ + + C P RPT ++ + L
Sbjct: 325 MYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase
Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain Kinase
Loc340156
Length = 373
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 792 FDRKI--AYEEIVRATNDFDEEHCIGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTC 848
FD +I A + V + + +G G G V++ E ++G +A K + M
Sbjct: 73 FDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKT---RGMKD 129
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSL-AMILSNATSAEELGW 907
++E NE+ + ++ H N+++ Y +V EY++ G L I+ + + EL
Sbjct: 130 KEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTEL-- 187
Query: 908 TQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLL---DLEYEAHVSDFGISKSLKPD 964
+ +K + + + ++H I++ D+ +N+L D + + + DFG+++ KP
Sbjct: 188 -DTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPR 242
Query: 965 SSNWTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
GT ++APE+ V+ +D++S GV+A + G P
Sbjct: 243 EKLKVNF-GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 90/227 (39%), Gaps = 16/227 (7%)
Query: 805 TNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
D++ IG G G V S V K S F E + + +
Sbjct: 73 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 865 RNIVK--FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
V FY F R+ ++V EY+ G L ++SN E+ W + V AL
Sbjct: 133 SPWVVQLFYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK--WARFYTA--EVVLALD 187
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELA-GTIGYVAPE 981
+H+ F ++RD+ N+LLD ++DFG + + + A GT Y++PE
Sbjct: 188 AIHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE 244
Query: 982 LAYTM----KVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNL 1024
+ + + D +S GV E + G P + S+ T S +
Sbjct: 245 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF-YADSLVGTYSKI 290
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 61/276 (22%), Positives = 123/276 (44%), Gaps = 39/276 (14%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQ--QEFLNEVKSLTEIRHRN--IVK 869
IG+GG V++ +I A+K + L E Q + NE+ L +++ + I++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVN---LEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 92
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCF 929
Y + ++ +Y +E G++ + S + + +R + K + +A+ +H
Sbjct: 93 LYDYEITDQY---IYMVMECGNIDLN-SWLKKKKSIDPWERKSYWKNMLEAVHTIHQH-- 146
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTE--LAGTIGYVAPELAYTMK 987
IV+ D+ N L+ ++ + DFGI+ ++PD+++ + GT+ Y+ PE M
Sbjct: 147 -GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 204
Query: 988 VTEKS-----------DVYSFGVLALEAIKGKHP-RDFISSICSTSSNLDRTLDEILDPR 1035
+ ++ DV+S G + GK P + I+ I L I+DP
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK--------LHAIIDPN 256
Query: 1036 LPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
+I +K + +V CL +P R ++ ++
Sbjct: 257 HEIEFPDIPEK--DLQDVLKCCLKRDPKQRISIPEL 290
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide
And Leucettine L4
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 808 FDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLN-EVKSLTEIRHR 865
+ + IG G G VY+A+L SGE+VA+KK + + F N E++ + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 73
Query: 866 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
NIV+ Y F S VY +Y+ + + + + L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSDFGISKSLKPDSSNWTELAGTIGYV 978
+L+Y+H+ I +RDI +N+LLD + + DFG +K L N + + Y
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 189
Query: 979 APELAY-TMKVTEKSDVYSFGVLALEAIKGK 1008
APEL + T DV+S G + E + G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGL 88
Query: 871 YGFCSHAR------HSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+ + +IV E ++ +L+ ++ E + + ++ + + +L
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ I++RD+ N+++ + + DFG++++ S T T Y APE+
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVIL 198
Query: 985 TMKVTEKSDVYSFGVLALEAIKG 1007
M E D++S G + E IKG
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 63/278 (22%), Positives = 124/278 (44%), Gaps = 43/278 (15%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQ--QEFLNEVKSLTEIRHRN--IVK 869
IG+GG V++ +I A+K + L E Q + NE+ L +++ + I++
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVN---LEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 76
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAM--ILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
Y + ++ +Y +E G++ + L S + W +R + K + +A+ +H
Sbjct: 77 LYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDP--W-ERKSYWKNMLEAVHTIHQH 130
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTE--LAGTIGYVAPELAYT 985
IV+ D+ N L+ ++ + DFGI+ ++PD+++ + GT+ Y+ PE
Sbjct: 131 ---GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 186
Query: 986 MKVTEKS-----------DVYSFGVLALEAIKGKHP-RDFISSICSTSSNLDRTLDEILD 1033
M + ++ DV+S G + GK P + I+ I L I+D
Sbjct: 187 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK--------LHAIID 238
Query: 1034 PRLPAPSCNIRDKLISIMEVAISCLDENPDSRPTMQKV 1071
P +I +K + +V CL +P R ++ ++
Sbjct: 239 PNHEIEFPDIPEK--DLQDVLKCCLKRDPKQRISIPEL 274
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 33/235 (14%)
Query: 787 LSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEM 846
+ VL D K + + TN IG G G V++A+L + VA+KK +
Sbjct: 25 IKVLASDGKTGEQREIAYTNC----KVIGNGSFGVVFQAKLVESDEVAIKK--------V 72
Query: 847 TCQQEFLN-EVKSLTEIRHRNIVK----FYGFCSHARHSF--IVYEYLEMGSLAMILSNA 899
+ F N E++ + ++H N+V FY F +V EY+ + +
Sbjct: 73 LQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP----ETVYRAS 128
Query: 900 TSAEELGWTQRMNVIK----GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSD 954
+L T M +IK + +L+Y+H+ I +RDI +N+LLD + D
Sbjct: 129 RHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLID 185
Query: 955 FGISKSLKPDSSNWTELAGTIGYVAPELAY-TMKVTEKSDVYSFGVLALEAIKGK 1008
FG +K L N + + Y APEL + T D++S G + E ++G+
Sbjct: 186 FGSAKILIAGEPNVSXICSRY-YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 90/227 (39%), Gaps = 16/227 (7%)
Query: 805 TNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
D++ IG G G V S V K S F E + + +
Sbjct: 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 127
Query: 865 RNIVK--FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
V FY F R+ ++V EY+ G L ++SN E+ W + V AL
Sbjct: 128 SPWVVQLFYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK--WARFYTA--EVVLALD 182
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELA-GTIGYVAPE 981
+H+ F ++RD+ N+LLD ++DFG + + + A GT Y++PE
Sbjct: 183 AIHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE 239
Query: 982 LAYTM----KVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNL 1024
+ + + D +S GV E + G P + S+ T S +
Sbjct: 240 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF-YADSLVGTYSKI 285
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The
Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The
Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 871 YGFCSHAR------HSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+ + +IV E ++ +L ++ E + + ++ + + +L
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ I++RD+ N+++ + + DFG++++ S T T Y APE+
Sbjct: 143 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVIL 198
Query: 985 TMKVTEKSDVYSFGVLALEAIKG 1007
M E D++S G + E IKG
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 9/187 (4%)
Query: 514 FPNLGTLDVSANNITGILPPEIGDSPQLKVLDLSSNHIVGEIPS----ELGKLRSLIKLT 569
P+L TL++ N +T + +L+ L L +N I IPS + LR L
Sbjct: 82 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPI-ESIPSYAFNRVPSLRRLDLGE 140
Query: 570 LNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPI 629
L R ++ + E L+ L +L+L L + IP +L LV+L L LS N+ P
Sbjct: 141 LKRLEYISEAAFE--GLVNLRYLNLGMCNLKD-IP-NLTALVRLEELELSGNRLDLIRPG 196
Query: 630 KLEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCFKEMHGLVYID 689
+ L L L H + + ++SLE+LNL+HNNL F +H L +
Sbjct: 197 SFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVH 256
Query: 690 ISYNKLH 696
+++N H
Sbjct: 257 LNHNPWH 263
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 89/221 (40%), Gaps = 52/221 (23%)
Query: 124 IPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTNQFSGRIPPQIGHLSYLK 183
+P+ I N++ YL+L NS +L L+IL LS N L L
Sbjct: 29 VPASIPVNTR--YLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLN 86
Query: 184 ALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPS------------EIGNLKSLS 231
L LF+N L+ + L+ L ++L NN + SIPS ++G LK L
Sbjct: 87 TLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRLDLGELKRLE 145
Query: 232 GL-ELGYNKLSGSMPLSLG-----NLPNLATL------DLHDNSLSGSIPLSFGNLTNL- 278
+ E + L L+LG ++PNL L +L N L P SF LT+L
Sbjct: 146 YISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLR 205
Query: 279 -----------------------DILNLPHNSLSGSIPSEM 296
+ LNL HN+L S+P ++
Sbjct: 206 KLWLMHAQVATIERNAFDDLKSLEELNLSHNNLM-SLPHDL 245
Score = 36.6 bits (83), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 82/206 (39%), Gaps = 41/206 (19%)
Query: 194 GSIPPSLGNLTNLAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPN 253
+P S+ N + L NS+ +L+ L L+L N + + LP+
Sbjct: 27 AEVPASIP--VNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPS 84
Query: 254 LATLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLS 313
L TL+L DN L+ +F L+ L L L +N + SIPS +FN++
Sbjct: 85 LNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE-SIPS------------YAFNRVP 131
Query: 314 GSIPSSLGNLTKLTILYLSDNLLFGSIPCEIGNLRY-------------------LFYLE 354
LG L +L Y+S+ G + NLRY L LE
Sbjct: 132 SLRRLDLGELKRLE--YISEAAFEGLV-----NLRYLNLGMCNLKDIPNLTALVRLEELE 184
Query: 355 LGDNKLSGSIPHSLGNLTNLATLYLF 380
L N+L P S LT+L L+L
Sbjct: 185 LSGNRLDLIRPGSFQGLTSLRKLWLM 210
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 97/249 (38%), Gaps = 30/249 (12%)
Query: 145 SGTIPPQIGNLSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLT 204
+GT P + S + T + +P I + L+L EN + + +L
Sbjct: 2 TGTSCPAACSCSNQASRVICTRRELAEVPASIP--VNTRYLNLQENSIQVIRTDTFKHLR 59
Query: 205 NLAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYNKLSG---------------------- 242
+L I+ L N + L SL+ LEL N+L+
Sbjct: 60 HLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPI 119
Query: 243 -SMP-LSLGNLPNLATLDLHD-NSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNL 299
S+P + +P+L LDL + L +F L NL LNL +L IP+ + L
Sbjct: 120 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLK-DIPN-LTAL 177
Query: 300 KSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNLLFGSIPCEIGNLRYLFYLELGDNK 359
L L LS N+L P S LT L L+L + +L+ L L L N
Sbjct: 178 VRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNN 237
Query: 360 LSGSIPHSL 368
L S+PH L
Sbjct: 238 LM-SLPHDL 245
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 41/90 (45%)
Query: 101 DFSFSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKI 160
D F PHL L+L+ NQ+ GI P+ S ++ L L N L LK
Sbjct: 47 DGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKT 106
Query: 161 LYLSTNQFSGRIPPQIGHLSYLKALHLFEN 190
L L NQ S +P HL+ L +L+L N
Sbjct: 107 LNLYDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 552 VGEIPSE--LGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGN 609
+G I S+ G+L L+KL L RNQ +G P ++ L L N++
Sbjct: 41 LGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLG 100
Query: 610 LVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHN 645
L +L LNL +NQ S +P E L+ L+L+ N
Sbjct: 101 LHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 200 LGNLTNLAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYNKLSG-SMPLSLGNLPNLATLD 258
G L +L + L N L+G P+ + L+LG NK+ S + LG L L TL+
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLG-LHQLKTLN 108
Query: 259 LHDNSLSGSIPLSFGNLTNLDILNLPHN 286
L+DN +S +P SF +L +L LNL N
Sbjct: 109 LYDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 26/122 (21%)
Query: 505 GEISFD--WGKFPNLGTLDVSANNITGILPPEIGDSPQLKVLDLSSNHIVGEIPSELGKL 562
G IS D +G+ P+L L++ N +TGI P + ++ L L N I EI +++
Sbjct: 42 GRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKI-KEISNKM--- 97
Query: 563 RSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQ 622
F G L QL+ L+L N++S +PGS +L L LNL++N
Sbjct: 98 ------------FLG--------LHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNP 137
Query: 623 FS 624
F+
Sbjct: 138 FN 139
Score = 37.4 bits (85), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%)
Query: 248 LGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGL 307
G LP+L L+L N L+G P +F +++ L L N + L L L L
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 308 SFNKLSGSIPSSLGNLTKLTILYLSDN 334
N++S +P S +L LT L L+ N
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 36.2 bits (82), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Query: 211 LYNNSLSGSIPSE--IGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSI 268
L N++ G I S+ G L L LEL N+L+G P + ++ L L +N +
Sbjct: 35 LLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEIS 94
Query: 269 PLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFN 310
F L L LNL N +S +P +L SL L L+ N
Sbjct: 95 NKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 136
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 13/146 (8%)
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSL--KPDSSNWTELAGTIGYVAPELAYTMKVTE 990
++RD++++N+LL + + DFG+++ + PD + + ++APE + T
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 272
Query: 991 KSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLIS 1049
+SDV+SFGVL E G P + R L E R+ AP +
Sbjct: 273 QSDVWSFGVLLWEIFSLGASPYPGV----KIDEEFCRRLKE--GTRMRAPDYTTPE---- 322
Query: 1050 IMEVAISCLDENPDSRPTMQKVSQLL 1075
+ + + C P RPT ++ + L
Sbjct: 323 MYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With
An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex With
An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 36/226 (15%)
Query: 790 LTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTC 848
+TFD YE I IG G G V A +G+ VA+KK + +T
Sbjct: 49 VTFDVGDEYEII----------ETIGNGAYGVVSSARRRLTGQQVAIKKIPN-AFDVVTN 97
Query: 849 QQEFLNEVKSLTEIRHRNIVKF---------YGFCSHARHSFIVYEYLEMGSLAMILSNA 899
+ L E+K L +H NI+ YG + ++V + +E L I+
Sbjct: 98 AKRTLRELKILKHFKHDNIIAIKDILRPTVPYG---EFKSVYVVLDLME-SDLHQIIH-- 151
Query: 900 TSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISK 959
S++ L + + L Y+H+ +++RD+ N+L++ E + DFG+++
Sbjct: 152 -SSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMAR 207
Query: 960 SL--KPDSSNW--TELAGTIGYVAPELAYTM-KVTEKSDVYSFGVL 1000
L P + TE T Y APEL ++ + T+ D++S G +
Sbjct: 208 GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCI 253
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 89
Query: 871 YGFCSHAR------HSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+ + +IV E ++ +L ++ E + + ++ + + +L
Sbjct: 90 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 143
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ I++RD+ N+++ + + DFG++++ S T T Y APE+
Sbjct: 144 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVIL 199
Query: 985 TMKVTEKSDVYSFGVLALEAIKG 1007
M E D++S G + E IKG
Sbjct: 200 GMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 13/146 (8%)
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSL--KPDSSNWTELAGTIGYVAPELAYTMKVTE 990
++RD++++N+LL + + DFG+++ + PD + + ++APE + T
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 281
Query: 991 KSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLIS 1049
+SDV+SFGVL E G P + R L E R+ AP +
Sbjct: 282 QSDVWSFGVLLWEIFSLGASPYPGV----KIDEEFCRRLKE--GTRMRAPDYTTPE---- 331
Query: 1050 IMEVAISCLDENPDSRPTMQKVSQLL 1075
+ + + C P RPT ++ + L
Sbjct: 332 MYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 90/227 (39%), Gaps = 16/227 (7%)
Query: 805 TNDFDEEHCIGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH 864
D++ IG G G V S V K S F E + + +
Sbjct: 73 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 865 RNIVK--FYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALS 922
V FY F R+ ++V EY+ G L ++SN E+ W + V AL
Sbjct: 133 SPWVVQLFYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK--WARFYTA--EVVLALD 187
Query: 923 YLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELA-GTIGYVAPE 981
+H+ F ++RD+ N+LLD ++DFG + + + A GT Y++PE
Sbjct: 188 AIHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE 244
Query: 982 LAYTM----KVTEKSDVYSFGVLALEAIKGKHPRDFISSICSTSSNL 1024
+ + + D +S GV E + G P + S+ T S +
Sbjct: 245 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF-YADSLVGTYSKI 290
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 13/146 (8%)
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSL--KPDSSNWTELAGTIGYVAPELAYTMKVTE 990
++RD++++N+LL + + DFG+++ + PD + + ++APE + T
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 279
Query: 991 KSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLIS 1049
+SDV+SFGVL E G P + R L E R+ AP +
Sbjct: 280 QSDVWSFGVLLWEIFSLGASPYPGV----KIDEEFCRRLKE--GTRMRAPDYTTPE---- 329
Query: 1050 IMEVAISCLDENPDSRPTMQKVSQLL 1075
+ + + C P RPT ++ + L
Sbjct: 330 MYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr-
3451
Length = 353
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISL 88
Query: 871 YGFCSHARHSFIVYEYLEMGSLAMILSNATSAE----ELGWTQRMNVIKGVADALSYLHN 926
+ + E + L M L +A + EL + ++ + + +LH+
Sbjct: 89 LNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 927 DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTM 986
I++RD+ N+++ + + DFG++++ S T T Y APE+ M
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 987 KVTEKSDVYSFGVLALEAIKGK--HP-RDFI 1014
E D++S G + E ++ K P RD+I
Sbjct: 201 GYKENVDIWSVGCIMGEMVRHKILFPGRDYI 231
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 871 YGFCSHAR------HSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+ + +IV E ++ +L+ ++ E + + ++ + + +L
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ I++RD+ N+++ + + DFG++++ S T T Y APE+
Sbjct: 143 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVIL 198
Query: 985 TMKVTEKSDVYSFGVLALEAIKG 1007
M E D++S G + E IKG
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 871 YGFCSHAR------HSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+ + +IV E ++ +L ++ E + + ++ + + +L
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ I++RD+ N+++ + + DFG++++ S T T Y APE+
Sbjct: 143 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVIL 198
Query: 985 TMKVTEKSDVYSFGVLALEAIKG 1007
M E D++S G + E IKG
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 871 YGFCSHAR------HSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+ + +IV E ++ +L+ ++ E + + ++ + + +L
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ I++RD+ N+++ + + DFG++++ S T T Y APE+
Sbjct: 143 HS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVIL 198
Query: 985 TMKVTEKSDVYSFGVLALEAIKG 1007
M E D++S G + E IKG
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 871 YGFCSHAR------HSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+ + +IV E ++ +L ++ E + + ++ + + +L
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ I++RD+ N+++ + + DFG++++ S T T Y APE+
Sbjct: 143 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPEVVTRYYRAPEVIL 198
Query: 985 TMKVTEKSDVYSFGVLALEAIKG 1007
M E D++S G + E IKG
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISL 88
Query: 871 YGFCSHARHSFIVYEYLEMGSLAMILSNATSAE----ELGWTQRMNVIKGVADALSYLHN 926
+ + E + L M L +A + EL + ++ + + +LH+
Sbjct: 89 LNVFTPQK----TLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 927 DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTM 986
I++RD+ N+++ + + DFG++++ S T T Y APE+ M
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 987 KVTEKSDVYSFGVLALEAIKGK--HP-RDFI 1014
E D++S G + E ++ K P RD+I
Sbjct: 201 GYKENVDIWSVGCIMGEMVRHKILFPGRDYI 231
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 36/226 (15%)
Query: 790 LTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRAELS-SGEIVAVKKFHSPLLSEMTC 848
+TFD YE I IG G G V A +G+ VA+KK + +T
Sbjct: 48 VTFDVGDEYEII----------ETIGNGAYGVVSSARRRLTGQQVAIKKIPN-AFDVVTN 96
Query: 849 QQEFLNEVKSLTEIRHRNIVKF---------YGFCSHARHSFIVYEYLEMGSLAMILSNA 899
+ L E+K L +H NI+ YG + ++V + +E L I+
Sbjct: 97 AKRTLRELKILKHFKHDNIIAIKDILRPTVPYG---EFKSVYVVLDLME-SDLHQIIH-- 150
Query: 900 TSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISK 959
S++ L + + L Y+H+ +++RD+ N+L++ E + DFG+++
Sbjct: 151 -SSQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMAR 206
Query: 960 SL--KPDSSNW--TELAGTIGYVAPELAYTM-KVTEKSDVYSFGVL 1000
L P + TE T Y APEL ++ + T+ D++S G +
Sbjct: 207 GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCI 252
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 14/154 (9%)
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSL--AMILSNATSAEELGWTQRMNVIKGVADA 920
+H NI+ +H ++V E + G L ++ S E + V+ +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKT 133
Query: 921 LSYLHNDCFPPIVYRDISSKNVLLDLEYE----AHVSDFGISKSLKPDSSNWTELAGTIG 976
+ YLH+ +V+RD+ N+L E + DFG +K L+ ++ T
Sbjct: 134 VEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN 190
Query: 977 YVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
+VAPE+ E D++S G+L + G P
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISL 88
Query: 871 YGFCSHAR------HSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+ + ++V E ++ +L ++ E + + ++ + + +L
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELDHERMSY-----LLYQMLXGIKHL 142
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ I++RD+ N+++ + + DFG++++ S T T Y APE+
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVIL 198
Query: 985 TMKVTEKSDVYSFGVLALEAIKGK--HP-RDFISS 1016
M E D++S G + E ++ K P RD+I
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 9/187 (4%)
Query: 514 FPNLGTLDVSANNITGILPPEIGDSPQLKVLDLSSNHIVGEIPS----ELGKLRSLIKLT 569
P+L TL++ N +T + +L+ L L +N I IPS + LR L
Sbjct: 82 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIES-IPSYAFNRVPSLRRLDLGE 140
Query: 570 LNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPI 629
L R ++ + E L+ L +L+L L + IP +L LV+L L LS N+ P
Sbjct: 141 LKRLEYISEAAFE--GLVNLRYLNLGMCNLKD-IP-NLTALVRLEELELSGNRLDLIRPG 196
Query: 630 KLEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCFKEMHGLVYID 689
+ L L L H + + ++SLE+LNL+HNNL F +H L +
Sbjct: 197 SFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVH 256
Query: 690 ISYNKLH 696
+++N H
Sbjct: 257 LNHNPWH 263
Score = 38.5 bits (88), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 89/221 (40%), Gaps = 52/221 (23%)
Query: 124 IPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTNQFSGRIPPQIGHLSYLK 183
+P+ I N++ YL+L NS +L L+IL LS N L L
Sbjct: 29 VPASIPVNTR--YLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLN 86
Query: 184 ALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPS------------EIGNLKSLS 231
L LF+N L+ + L+ L ++L NN + SIPS ++G LK L
Sbjct: 87 TLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRLDLGELKRLE 145
Query: 232 GL-ELGYNKLSGSMPLSLG-----NLPNLATL------DLHDNSLSGSIPLSFGNLTNL- 278
+ E + L L+LG ++PNL L +L N L P SF LT+L
Sbjct: 146 YISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLR 205
Query: 279 -----------------------DILNLPHNSLSGSIPSEM 296
+ LNL HN+L S+P ++
Sbjct: 206 KLWLMHAQVATIERNAFDDLKSLEELNLSHNNLM-SLPHDL 245
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 82/206 (39%), Gaps = 41/206 (19%)
Query: 194 GSIPPSLGNLTNLAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPN 253
+P S+ N + L NS+ +L+ L L+L N + + LP+
Sbjct: 27 AEVPASIP--VNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPS 84
Query: 254 LATLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLS 313
L TL+L DN L+ +F L+ L L L +N + SIPS +FN++
Sbjct: 85 LNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE-SIPS------------YAFNRVP 131
Query: 314 GSIPSSLGNLTKLTILYLSDNLLFGSIPCEIGNLRY-------------------LFYLE 354
LG L +L Y+S+ G + NLRY L LE
Sbjct: 132 SLRRLDLGELKRLE--YISEAAFEGLV-----NLRYLNLGMCNLKDIPNLTALVRLEELE 184
Query: 355 LGDNKLSGSIPHSLGNLTNLATLYLF 380
L N+L P S LT+L L+L
Sbjct: 185 LSGNRLDLIRPGSFQGLTSLRKLWLM 210
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 97/249 (38%), Gaps = 30/249 (12%)
Query: 145 SGTIPPQIGNLSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLT 204
+GT P + S + T + +P I + L+L EN + + +L
Sbjct: 2 TGTSCPAACSCSNQASRVICTRRELAEVPASIP--VNTRYLNLQENSIQVIRTDTFKHLR 59
Query: 205 NLAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYNKLSG---------------------- 242
+L I+ L N + L SL+ LEL N+L+
Sbjct: 60 HLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPI 119
Query: 243 -SMP-LSLGNLPNLATLDLHD-NSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNL 299
S+P + +P+L LDL + L +F L NL LNL +L IP+ + L
Sbjct: 120 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLK-DIPN-LTAL 177
Query: 300 KSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNLLFGSIPCEIGNLRYLFYLELGDNK 359
L L LS N+L P S LT L L+L + +L+ L L L N
Sbjct: 178 VRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNN 237
Query: 360 LSGSIPHSL 368
L S+PH L
Sbjct: 238 LM-SLPHDL 245
Score = 30.0 bits (66), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 87/205 (42%), Gaps = 21/205 (10%)
Query: 92 SAGLIGTLHDFSFSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSN------SFS 145
S L+ + +F+ P L L+L N++ + SKL+ L L +N S++
Sbjct: 67 SKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYA 126
Query: 146 GTIPPQIGNL---SMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGN 202
P + L + ++ Y+S F G L L+ L+L L P+L
Sbjct: 127 FNRVPSLRRLDLGELKRLEYISEAAFEG--------LVNLRYLNLGMCNLKDI--PNLTA 176
Query: 203 LTNLAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDN 262
L L + L N L P L SL L L + +++ + +L +L L+L N
Sbjct: 177 LVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHN 236
Query: 263 SLSGSIPLS-FGNLTNLDILNLPHN 286
+L S+P F L L+ ++L HN
Sbjct: 237 NLM-SLPHDLFTPLHRLERVHLNHN 260
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 11/162 (6%)
Query: 855 EVKSLTEIRHRNIVKFYG--FCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMN 912
E++ L +RH+N+++ + + ++V EY G M+ ++ + Q
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEML--DSVPEKRFPVCQAHG 113
Query: 913 VIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWT--E 970
+ D L YLH+ IV++DI N+LL +S G++++L P +++ T
Sbjct: 114 YFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRT 170
Query: 971 LAGTIGYVAPELAYTMKVTE--KSDVYSFGVLALEAIKGKHP 1010
G+ + PE+A + K D++S GV G +P
Sbjct: 171 SQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 814 IGTGGQGSVYRA-ELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYG 872
IG+G QG V A + G VAVKK P ++ ++ + E+ L + H+NI+
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAY-RELVLLKCVNHKNIISLLN 88
Query: 873 FCSHARHSFIVYEYLEMGSLAMILSNATSAE----ELGWTQRMNVIKGVADALSYLHNDC 928
+ + E + L M L +A + EL + ++ + + +LH+
Sbjct: 89 VFTPQK----TLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHS-- 142
Query: 929 FPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNW--TELAGTIGYVAPELAYTM 986
I++RD+ N+++ + + DFG++++ S+N+ T T Y APE+ M
Sbjct: 143 -AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---STNFMMTPYVVTRYYRAPEVILGM 198
Query: 987 KVTEKSDVYSFGVLALEAIKG 1007
E D++S G + E +KG
Sbjct: 199 GYKENVDIWSVGCIMGELVKG 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 81
Query: 871 YGFCSHARHSFIVYEYLEMGSLAMILSNATSAE----ELGWTQRMNVIKGVADALSYLHN 926
+ + E + L M L +A + EL + ++ + + +LH+
Sbjct: 82 LNVFTPQK----TLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHS 137
Query: 927 DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTM 986
I++RD+ N+++ + + DFG++++ S T T Y APE+ M
Sbjct: 138 ---AGIIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILGM 193
Query: 987 KVTEKSDVYSFGVLALEAIKGK--HP-RDFI 1014
E D++S G + E ++ K P RD+I
Sbjct: 194 GYKENVDIWSVGCIMGEMVRHKILFPGRDYI 224
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 808 FDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLN-EVKSLTEIRHR 865
+ + IG G G VY+A+L SGE+VA+KK + + F N E++ + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQGKAFKNRELQIMRKLDHC 73
Query: 866 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
NIV+ Y F S VY +Y+ + + + + L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSDFGISKSLKPDSSNWTELAGTIGYV 978
+L+Y+H+ I +RDI +N+LLD + + DFG +K L N + + Y
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 189
Query: 979 APELAY-TMKVTEKSDVYSFGVLALEAIKGK 1008
APEL + T DV+S G + E + G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 808 FDEEHCIGTGGQGSVYRAEL-SSGEIVAVKKFHSPLLSEMTCQQEFLN-EVKSLTEIRHR 865
+ + IG G G VY+A+L SGE+VA+KK + + F N E++ + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQGKAFKNRELQIMRKLDHC 73
Query: 866 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNATSAEELGWTQRMNVIKGVAD 919
NIV+ Y F S VY +Y+ + + + + L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLLDLEYEA-HVSDFGISKSLKPDSSNWTELAGTIGYV 978
+L+Y+H+ I +RDI +N+LLD + + DFG +K L N + + Y
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 189
Query: 979 APELAY-TMKVTEKSDVYSFGVLALEAIKGK 1008
APEL + T DV+S G + E + G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 863 RHRNIVKFYGFCSHARHSFIVYEYLEMGSL-AMILSNATSAEELGWTQRMNVIKGVADAL 921
+H NI+ +H ++V E + G L IL +E + V+ + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSER----EASFVLHTIGKTV 134
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYE----AHVSDFGISKSLKPDSSNWTELAGTIGY 977
YLH+ +V+RD+ N+L E + DFG +K L+ ++ T +
Sbjct: 135 EYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANF 191
Query: 978 VAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
VAPE+ E D++S G+L + G P
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 120/272 (44%), Gaps = 43/272 (15%)
Query: 814 IGTGGQGSVYRAELSSGEIVAVKKFHSPLLSEMTCQ--QEFLNEVKSLTEIRHRN--IVK 869
IG+GG V++ +I A+K + L E Q + NE+ L +++ + I++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVN---LEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 120
Query: 870 FYGFCSHARHSFIVYEYLEMGSLAM--ILSNATSAEELGWTQRMNVIKGVADALSYLHND 927
Y + ++ ++V +E G++ + L S + W +R + K + +A+ +H
Sbjct: 121 LYDYEITDQYIYMV---MECGNIDLNSWLKKKKSIDP--W-ERKSYWKNMLEAVHTIHQH 174
Query: 928 CFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTE--LAGTIGYVAPELAYT 985
IV+ D+ N L+ ++ + DFGI+ ++PD+++ + G + Y+ PE
Sbjct: 175 G---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKD 230
Query: 986 MKVTEKS-----------DVYSFGVLALEAIKGKHP-RDFISSICSTSSNLDRTLDEILD 1033
M + ++ DV+S G + GK P + I+ I L I+D
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK--------LHAIID 282
Query: 1034 PRLPAPSCNIRDKLISIMEVAISCLDENPDSR 1065
P +I +K + +V CL +P R
Sbjct: 283 PNHEIEFPDIPEK--DLQDVLKCCLKRDPKQR 312
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 65/263 (24%), Positives = 119/263 (45%), Gaps = 33/263 (12%)
Query: 814 IGTGGQGSVYRAELSS--GEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFY 871
+G G G VY ++ GE + V + +++F++E + + H +IVK
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 872 GFCSHARHSFIVYEYLEMGSLAMILS-NATSAEELGWTQRMNVIKGVADALSYLHN-DCF 929
G ++I+ E G L L N S + L T + ++ + A++YL + +C
Sbjct: 92 GIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQ-ICKAMAYLESINC- 146
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPD---SSNWTELAGTIGYVAPELAYTM 986
V+RDI+ +N+L+ + DFG+S+ ++ + ++ T L I +++PE
Sbjct: 147 ---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSPESINFR 201
Query: 987 KVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDP--RLPAPSCNI 1043
+ T SDV+ F V E + GK P ++ ++ + +L+ RLP P
Sbjct: 202 RFTTASDVWMFAVCMWEILSFGKQPFFWLE---------NKDVIGVLEKGDRLPKPDL-C 251
Query: 1044 RDKLISIMEVAISCLDENPDSRP 1066
L ++M C D +P RP
Sbjct: 252 PPVLYTLM---TRCWDYDPSDRP 271
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 65/263 (24%), Positives = 119/263 (45%), Gaps = 33/263 (12%)
Query: 814 IGTGGQGSVYRAELSS--GEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFY 871
+G G G VY ++ GE + V + +++F++E + + H +IVK
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 872 GFCSHARHSFIVYEYLEMGSLAMILS-NATSAEELGWTQRMNVIKGVADALSYLHN-DCF 929
G ++I+ E G L L N S + L T + ++ + A++YL + +C
Sbjct: 76 GIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQ-ICKAMAYLESINC- 130
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPD---SSNWTELAGTIGYVAPELAYTM 986
V+RDI+ +N+L+ + DFG+S+ ++ + ++ T L I +++PE
Sbjct: 131 ---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSPESINFR 185
Query: 987 KVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDP--RLPAPSCNI 1043
+ T SDV+ F V E + GK P ++ ++ + +L+ RLP P
Sbjct: 186 RFTTASDVWMFAVCMWEILSFGKQPFFWLE---------NKDVIGVLEKGDRLPKPDL-C 235
Query: 1044 RDKLISIMEVAISCLDENPDSRP 1066
L ++M C D +P RP
Sbjct: 236 PPVLYTLM---TRCWDYDPSDRP 255
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 65/263 (24%), Positives = 119/263 (45%), Gaps = 33/263 (12%)
Query: 814 IGTGGQGSVYRAELSS--GEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKFY 871
+G G G VY ++ GE + V + +++F++E + + H +IVK
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 872 GFCSHARHSFIVYEYLEMGSLAMILS-NATSAEELGWTQRMNVIKGVADALSYLHN-DCF 929
G ++I+ E G L L N S + L T + ++ + A++YL + +C
Sbjct: 80 GIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQ-ICKAMAYLESINC- 134
Query: 930 PPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPD---SSNWTELAGTIGYVAPELAYTM 986
V+RDI+ +N+L+ + DFG+S+ ++ + ++ T L I +++PE
Sbjct: 135 ---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSPESINFR 189
Query: 987 KVTEKSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDP--RLPAPSCNI 1043
+ T SDV+ F V E + GK P ++ ++ + +L+ RLP P
Sbjct: 190 RFTTASDVWMFAVCMWEILSFGKQPFFWLE---------NKDVIGVLEKGDRLPKPDL-C 239
Query: 1044 RDKLISIMEVAISCLDENPDSRP 1066
L ++M C D +P RP
Sbjct: 240 PPVLYTLM---TRCWDYDPSDRP 259
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 933 VYRDISSKNVLLDLEYEAHVSDFGISKSL--KPDSSNWTELAGTIGYVAPELAYTMKVTE 990
++RD++++N+LL + DFG+++ + PD + + ++APE + +
Sbjct: 221 IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYST 280
Query: 991 KSDVYSFGVLALEAIK-GKHPRDFISSICSTSSNLDRTLDEILDPRLPAPSCNIRDKLIS 1049
KSDV+S+GVL E G P + S L + R+ AP + +
Sbjct: 281 KSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGM------RMRAPEYSTPE---- 330
Query: 1050 IMEVAISCLDENPDSRPTMQKVSQLL 1075
I ++ + C +P RP ++ + L
Sbjct: 331 IYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 16/260 (6%)
Query: 108 PHLAYLDLRVNQI----FGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYL 163
P + LRV Q +P +I+ ++ L LDL +N S L L L L
Sbjct: 28 PFGCHCHLRVVQCSDLGLKAVPKEISPDTTL--LDLQNNDISELRKDDFKGLQHLYALVL 85
Query: 164 STNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSE 223
N+ S L L+ L++ +N L IPP+L ++L + +++N +
Sbjct: 86 VNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGV 142
Query: 224 IGNLKSLSGLELGYNKL--SGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDIL 281
L++++ +E+G N L SG P + L L L + + L+G IP L+ L
Sbjct: 143 FSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLPE--TLNEL 198
Query: 282 NLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNLLFGSIP 341
+L HN + ++ LY LGL N++ SL L L L+L +N L +P
Sbjct: 199 HLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKL-SRVP 257
Query: 342 CEIGNLRYLFYLELGDNKLS 361
+ +L+ L + L N ++
Sbjct: 258 AGLPDLKLLQVVYLHTNNIT 277
Score = 37.0 bits (84), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 90/230 (39%), Gaps = 44/230 (19%)
Query: 487 FGIHSNLSYINLSH---KKFYGEISFDWGKFPNLGTLDVSANNITGILPPEIGDSPQLKV 543
FG H +L + S K EIS P+ LD+ N+I+ + + L
Sbjct: 29 FGCHCHLRVVQCSDLGLKAVPKEIS------PDTTLLDLQNNDISELRKDDFKGLQHLYA 82
Query: 544 LDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLE------------- 590
L L +N I LR L KL +++N P SL++L
Sbjct: 83 LVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVELRIHDNRIRKVPKGV 142
Query: 591 --------HLDLSSNRLSNS--IPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDL 640
+++ N L NS PG+ L KL YL +S + +G IP L + L++L
Sbjct: 143 FSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLPET--LNEL 198
Query: 641 DLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLS-------GFIPRCFKEMH 683
L HN + + L +L L HN + F+P +E+H
Sbjct: 199 HLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLP-TLRELH 247
Score = 31.2 bits (69), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 94/233 (40%), Gaps = 19/233 (8%)
Query: 327 TILYLSDNLLFGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSG 386
T+L L +N + + L++L+ L L +NK+S + L L LY+ N L
Sbjct: 57 TLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV- 115
Query: 387 SIPSEIXXXXXXXXXXXXXXXXXXXIPYS-FGNLTNMIVLSIYSNAL--SGAIPKEYGNL 443
IP + +P F L NM + + N L SG P + L
Sbjct: 116 EIPPNL---PSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL 172
Query: 444 VKLTLLVLSYNQLQGPIPDLRNLTRLARVRLDRNHLTGNISESFGIHSNLSYINLSHKKF 503
KL L +S +L G DL L + LD N + E +S L + L H +
Sbjct: 173 -KLNYLRISEAKLTGIPKDLPET--LNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 229
Query: 504 Y----GEISFDWGKFPNLGTLDVSANNITGILPPEIGDSPQLKVLDLSSNHIV 552
G +SF P L L + N ++ + P + D L+V+ L +N+I
Sbjct: 230 RMIENGSLSF----LPTLRELHLDNNKLSRV-PAGLPDLKLLQVVYLHTNNIT 277
Score = 30.4 bits (67), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 101/255 (39%), Gaps = 37/255 (14%)
Query: 280 ILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNLLFGS 339
+L+L +N +S + L+ LY L L NK+S + L KL LY+S N L
Sbjct: 58 LLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-E 116
Query: 340 IPCEIGNLRYLFYLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGSIPSEIXXXXXXX 399
IP + + L L + DN++ L N+ + + N L S
Sbjct: 117 IPPNLPS--SLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENS------------ 162
Query: 400 XXXXXXXXXXXXIPYSFGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQG- 458
P +F L + L I L+G IPK+ L L L +N++Q
Sbjct: 163 ----------GFEPGAFDGLK-LNYLRISEAKLTG-IPKDLPE--TLNELHLDHNKIQAI 208
Query: 459 PIPDLRNLTRLARVRLDRNHLTGNISESFGIHSNLSYINLSHKKFYGEISFDWGKFPNLG 518
+ DL ++L R+ L N + + S L ++L + K +S P+L
Sbjct: 209 ELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNK----LSRVPAGLPDLK 264
Query: 519 TLDV---SANNITGI 530
L V NNIT +
Sbjct: 265 LLQVVYLHTNNITKV 279
Score = 29.6 bits (65), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 5/110 (4%)
Query: 84 KVNSINLTSAGLIGTLHDFSFSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNS 143
K+N + ++ A L G D + L L L N+I I + SKL L L N
Sbjct: 173 KLNYLRISEAKLTGIPKDLPET----LNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQ 228
Query: 144 FSGTIPPQIGNLSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLS 193
+ L L+ L+L N+ S R+P + L L+ ++L N ++
Sbjct: 229 IRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNIT 277
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 59/133 (44%), Gaps = 2/133 (1%)
Query: 557 SELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYL 616
S L +L +L L L NQ L L+ L L N+L + G L L YL
Sbjct: 79 SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYL 138
Query: 617 NLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIPSQVCS-MQSLEKLNLAHNNLSGFI 675
NL++NQ +K +L++LDLS+N L + +P V + L+ L L N L
Sbjct: 139 NLAHNQLQSLPKGVFDKLTNLTELDLSYNQL-QSLPEGVFDKLTQLKDLRLYQNQLKSVP 197
Query: 676 PRCFKEMHGLVYI 688
F + L YI
Sbjct: 198 DGVFDRLTSLQYI 210
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 73/168 (43%), Gaps = 12/168 (7%)
Query: 207 AIMYLYNN---SLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGN-----LPNLATLD 258
I YL N +L G+ +I LK L+ L Y L+G+ SL N L NL L
Sbjct: 58 GIQYLPNVRYLALGGNKLHDISALKELTNLT--YLILTGNQLQSLPNGVFDKLTNLKELV 115
Query: 259 LHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPS 318
L +N L F LTNL LNL HN L L +L L LS+N+L
Sbjct: 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEG 175
Query: 319 SLGNLTKLTILYLSDNLLFGSIPCEI-GNLRYLFYLELGDNKLSGSIP 365
LT+L L L N L S+P + L L Y+ L DN + P
Sbjct: 176 VFDKLTQLKDLRLYQNQL-KSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 63/147 (42%), Gaps = 5/147 (3%)
Query: 352 YLELGDNKLSGSIPHSLGNLTNLATLYLFTNLLSGSIPSEIXXXXXXXXXXXXXXXXXXX 411
YL LG NKL +L LTNL L L N L S+P+ +
Sbjct: 67 YLALGGNKLHDI--SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQS 123
Query: 412 IPYS-FGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQG-PIPDLRNLTRL 469
+P F LTN+ L++ N L + L LT L LSYNQLQ P LT+L
Sbjct: 124 LPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQL 183
Query: 470 ARVRLDRNHLTGNISESFGIHSNLSYI 496
+RL +N L F ++L YI
Sbjct: 184 KDLRLYQNQLKSVPDGVFDRLTSLQYI 210
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 62/140 (44%), Gaps = 3/140 (2%)
Query: 443 LVKLTLLVLSYNQLQG-PIPDLRNLTRLARVRLDRNHLTGNISESFGIHSNLSYINLSHK 501
L LT L+L+ NQLQ P LT L + L N L F +NL+Y+NL+H
Sbjct: 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHN 143
Query: 502 KFYGEISFDWGKFPNLGTLDVSANNITGILPPEIGDS-PQLKVLDLSSNHIVGEIPSELG 560
+ + K NL LD+S N + LP + D QLK L L N +
Sbjct: 144 QLQSLPKGVFDKLTNLTELDLSYNQLQS-LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFD 202
Query: 561 KLRSLIKLTLNRNQFSGQLP 580
+L SL + L+ N + P
Sbjct: 203 RLTSLQYIWLHDNPWDCTCP 222
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 72/174 (41%), Gaps = 9/174 (5%)
Query: 199 SLGNLTNLAIMYLYNNSLSGSIPSEI-GNLKSLSGLELGYNKLSGSMPLSLGNLPNLATL 257
+L LTNL + L N L S+P+ + L +L L L N+L L NL L
Sbjct: 80 ALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYL 138
Query: 258 DLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIP 317
+L N L F LTNL L+L +N L L L L L N+L
Sbjct: 139 NLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPD 198
Query: 318 SSLGNLTKLTILYLSDNLLFGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGNL 371
LT L ++L DN C +RYL NK SG + +S G++
Sbjct: 199 GVFDRLTSLQYIWLHDN----PWDCTCPGIRYLSEWI---NKHSGVVRNSAGSV 245
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 589 LEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLG 648
+ +L L N+L + +L L L YL L+ NQ +K +L +L L N L
Sbjct: 65 VRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQL- 121
Query: 649 EEIPSQVCS-MQSLEKLNLAHNNLSGFIPRCFKEMHGLVYIDISYNKLH 696
+ +P V + +L LNLAHN L F ++ L +D+SYN+L
Sbjct: 122 QSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ 170
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 78/208 (37%), Gaps = 21/208 (10%)
Query: 128 IANNSKLK------------YLDLSSNSFSGTIPPQIGNLSMLKILYLSTNQFSGRIPPQ 175
IANNS +K YL L N + L+ L L L+ NQ
Sbjct: 47 IANNSDIKSVQGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGV 104
Query: 176 IGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSEIGNLKSLSGLEL 235
L+ LK L L EN L LTNL + L +N L L +L+ L+L
Sbjct: 105 FDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164
Query: 236 GYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSE 295
YN+L L L L L+ N L F LT+L + L N + P
Sbjct: 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP-- 222
Query: 296 MGNLKSLYGLGLSFNKLSGSIPSSLGNL 323
+ L NK SG + +S G++
Sbjct: 223 -----GIRYLSEWINKHSGVVRNSAGSV 245
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 60/163 (36%), Gaps = 2/163 (1%)
Query: 107 FPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTN 166
P++ YL L N++ I S + + L YL L+ N L+ LK L L N
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVEN 119
Query: 167 QFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSEIGN 226
Q L+ L L+L N L LTNL + L N L
Sbjct: 120 QLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDK 179
Query: 227 LKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIP 269
L L L L N+L L +L + LHDN + P
Sbjct: 180 LTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 47/118 (39%)
Query: 104 FSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYL 163
F +L L L NQ+ + + L YL+L+ N L+ L L L
Sbjct: 105 FDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164
Query: 164 STNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIP 221
S NQ L+ LK L L++N L LT+L ++L++N + P
Sbjct: 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 71/168 (42%), Gaps = 6/168 (3%)
Query: 224 IGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILNL 283
I L ++ L LG NKL +L L NL L L N L F LTNL L L
Sbjct: 59 IQYLPNVRYLALGGNKLHDIS--ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116
Query: 284 PHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNLLFGSIPCE 343
N L L +L L L+ N+L LT LT L LS N L S+P
Sbjct: 117 VENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQL-QSLPEG 175
Query: 344 I-GNLRYLFYLELGDNKLSGSIPHSL-GNLTNLATLYLFTNLLSGSIP 389
+ L L L L N+L S+P + LT+L ++L N + P
Sbjct: 176 VFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 583 LGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDL 642
L L L +L L+ N+L + G L L L L NQ +K +L+ L+L
Sbjct: 81 LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140
Query: 643 SHNFLGEEIPSQVCS-MQSLEKLNLAHNNLSGFIPRCFKEMHGLVYIDISYNKL 695
+HN L + +P V + +L +L+L++N L F ++ L + + N+L
Sbjct: 141 AHNQL-QSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQL 193
Score = 29.6 bits (65), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 62/144 (43%), Gaps = 7/144 (4%)
Query: 251 LPNLATLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFN 310
LPN+ L L N L L LTNL L L N L L +L L L N
Sbjct: 62 LPNVRYLALGGNKLHDISALK--ELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVEN 119
Query: 311 KLSGSIPSSLGNLTKLTILYLSDNLLFGSIPCEI-GNLRYLFYLELGDNKLSGSIPHSL- 368
+L LT LT L L+ N L S+P + L L L+L N+L S+P +
Sbjct: 120 QLQSLPDGVFDKLTNLTYLNLAHNQL-QSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVF 177
Query: 369 GNLTNLATLYLFTNLLSGSIPSEI 392
LT L L L+ N L S+P +
Sbjct: 178 DKLTQLKDLRLYQNQLK-SVPDGV 200
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 22/203 (10%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 34 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 90
Query: 871 YGFCSHAR------HSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+ + +IV E ++ +L ++ E + + ++ + + +L
Sbjct: 91 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 144
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ I++RD+ N+++ + + DFG++++ S T Y APE+
Sbjct: 145 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMVPFVVTRYYRAPEVIL 200
Query: 985 TMKVTEKSDVYSFGVLALEAIKG 1007
M E D++S G + E IKG
Sbjct: 201 GMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 88
Query: 871 YGFCSHAR------HSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+ + ++V E ++ +L ++ E + + ++ + + +L
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELDHERMSY-----LLYQMLXGIKHL 142
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ I++RD+ N+++ + + DFG++++ S T T Y APE+
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVIL 198
Query: 985 TMKVTEKSDVYSFGVLALEAIKGK--HP-RDFISS 1016
M E D++S G + E ++ K P RD+I
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 97/236 (41%), Gaps = 32/236 (13%)
Query: 782 NAPGFLSVLTFDRKIAYEEIVRATNDFDEEHCIGTGGQGSVYRA-ELSSGEIVAVKKFHS 840
PG +SV + + R T +G G G VY+A + + E VA+K+
Sbjct: 17 QGPGSMSVSAAPSATSIDRYRRITK-------LGEGTYGEVYKAIDTVTNETVAIKRIRL 69
Query: 841 PLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNAT 900
E + EV L E++HRNI++ H +++EY E + N
Sbjct: 70 EH-EEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPD 128
Query: 901 SAEELGWTQRMNVIKG----VADALSYLH-NDCFPPIVYRDISSKNVLLDLEYEAH---- 951
+ M VIK + + +++ H C ++RD+ +N+LL + +
Sbjct: 129 VS--------MRVIKSFLYQLINGVNFCHSRRC----LHRDLKPQNLLLSVSDASETPVL 176
Query: 952 -VSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEKS-DVYSFGVLALEAI 1005
+ DFG++++ +T T+ Y PE+ + S D++S + E +
Sbjct: 177 KIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 46.6 bits (109), Expect = 8e-05, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 82
Query: 871 YGFCSHARHSFIVYEYLEMGSLAMILSNATSAE----ELGWTQRMNVIKGVADALSYLHN 926
+ + E + L M L +A + EL + ++ + + +LH+
Sbjct: 83 LNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 138
Query: 927 DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTM 986
I++RD+ N+++ + + DFG++++ S T T Y APE+ M
Sbjct: 139 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 987 KVTEKSDVYSFGVLALEAIKGK--HP-RDFI 1014
E D++S G + E ++ K P RD+I
Sbjct: 195 GYKENVDIWSVGCIMGEMVRHKILFPGRDYI 225
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 46.6 bits (109), Expect = 8e-05, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 82
Query: 871 YGFCSHARHSFIVYEYLEMGSLAMILSNATSAE----ELGWTQRMNVIKGVADALSYLHN 926
+ + E + L M L +A + EL + ++ + + +LH+
Sbjct: 83 LNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 138
Query: 927 DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTM 986
I++RD+ N+++ + + DFG++++ S T T Y APE+ M
Sbjct: 139 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 987 KVTEKSDVYSFGVLALEAIKGK--HP-RDFI 1014
E D++S G + E ++ K P RD+I
Sbjct: 195 GYKENVDIWSVGCIMGEMVRHKILFPGRDYI 225
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 46.6 bits (109), Expect = 8e-05, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 81
Query: 871 YGFCSHARHSFIVYEYLEMGSLAMILSNATSAE----ELGWTQRMNVIKGVADALSYLHN 926
+ + E + L M L +A + EL + ++ + + +LH+
Sbjct: 82 LNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 137
Query: 927 DCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTM 986
I++RD+ N+++ + + DFG++++ S T T Y APE+ M
Sbjct: 138 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILGM 193
Query: 987 KVTEKSDVYSFGVLALEAIKGK--HP-RDFI 1014
E D++S G + E ++ K P RD+I
Sbjct: 194 GYKENVDIWSVGCIMGEMVRHKILFPGRDYI 224
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 478 HLTGNISESFGIHSNLSYINLSH----KKFYGEISFDWGKFPNLGTLDVSANNITGILPP 533
HL+ N+ +F + + + Y L+ + ++ D G P LGTLD+S N + + P
Sbjct: 37 HLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQSL--P 93
Query: 534 EIGDS-PQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHL 592
+G + P L VLD+S N + L L L +L L N+ P L +LE L
Sbjct: 94 LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153
Query: 593 DLSSNRLSNSIPGSLGNLVKLYYLNLSNN 621
L++N+L+ G L L L L L N
Sbjct: 154 SLANNQLTELPAGLLNGLENLDTLLLQEN 182
Score = 35.0 bits (79), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 225 GNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPL-SFGNLTNLDILNL 283
G L L L+L +N+L S+PL LP L LD+ N L+ S+PL + L L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYL 131
Query: 284 PHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGN-LTKLTILYLSDNLLFGSIP 341
N L P + L L L+ N+L+ +P+ L N L L L L +N L+ +IP
Sbjct: 132 KGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSLY-TIP 188
Score = 33.9 bits (76), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 560 GKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLS 619
G L L L L+ NQ LP +L L LD+S NRL++ G+L L +L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 620 NNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCF 679
N+ P L L L L++N L E + +++L+ L L N+L IP+ F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLYT-IPKGF 191
Query: 680 KEMHGLVY 687
H L +
Sbjct: 192 FGSHLLPF 199
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 153 GNLSMLKILYLSTNQFSGRIPPQIGH-LSYLKALHLFENGLSGSIPPSLGNLTNLAIMYL 211
G L +L L LS NQ P +G L L L + N L+ +L L L +YL
Sbjct: 74 GTLPVLGTLDLSHNQLQSL--PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYL 131
Query: 212 YNNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGN-LPNLATLDLHDNSLSGSIPL 270
N L P + L L L N+L+ +P L N L NL TL L +NSL +IP
Sbjct: 132 KGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSLY-TIPK 189
Query: 271 SF 272
F
Sbjct: 190 GF 191
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 82/191 (42%), Gaps = 14/191 (7%)
Query: 516 NLGTLDVSANNITGILPPEIGDSPQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQF 575
N+ VS + +L P SP L LD S+N + + G L L L L NQ
Sbjct: 303 NIKNFTVSGTRMVHMLCPS-KISPFLH-LDFSNNLLTDTVFENCGHLTELETLILQMNQL 360
Query: 576 S-----GQLPTELGSLIQLEHLDLSSNRLS-NSIPGSLGNLVKLYYLNLSNNQFSGEIPI 629
++ T++ SL QL D+S N +S + G L LN+S+N + I
Sbjct: 361 KELSKIAEMTTQMKSLQQL---DISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFR 417
Query: 630 KLEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCFKEMHGLVYID 689
L I + DL H+ + IP QV +++L++LN+A N L F + L I
Sbjct: 418 CLPPRIKVLDL---HSNKIKSIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIW 474
Query: 690 ISYNKLHGPIP 700
+ N P
Sbjct: 475 LHTNPWDCSCP 485
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 31/184 (16%)
Query: 425 LSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQGPIPDLRNLTRLARVRLDRNHLTGNIS 484
L +N L+ + + G+L +L L+L NQ L+ L+++A + L
Sbjct: 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQ-------LKELSKIAEMTTQMKSL----- 376
Query: 485 ESFGIHSNLSYINLSHKKFYGEISFDWGKFPNLGTLDVSANNITG----ILPPEIGDSPQ 540
+ I N ++S+ + G+ S W K +L +L++S+N +T LPP I
Sbjct: 377 QQLDISQN----SVSYDEKKGDCS--WTK--SLLSLNMSSNILTDTIFRCLPPRI----- 423
Query: 541 LKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLS 600
KVLDL SN I IP ++ KL +L +L + NQ L L+ + L +N
Sbjct: 424 -KVLDLHSNKI-KSIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWD 481
Query: 601 NSIP 604
S P
Sbjct: 482 CSCP 485
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 101 DFSFSSF-PHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGT-IPPQIGNLSML 158
D S F L YLDL N++ I N LK+LDLS N+F I + GN+S L
Sbjct: 61 DISVFKFNQELEYLDLSHNKLVKISCHPTVN---LKHLDLSFNAFDALPICKEFGNMSQL 117
Query: 159 KILYLSTNQFSGRIPPQIGHLSYLKAL 185
K L LST I HL+ K L
Sbjct: 118 KFLGLSTTHLEKSSVLPIAHLNISKVL 144
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 76/197 (38%), Gaps = 31/197 (15%)
Query: 123 IIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLKILYLSTNQFS--GRIPPQIGHLS 180
+ PS+I S +LD S+N + T+ G+L+ L+ L L NQ +I +
Sbjct: 318 LCPSKI---SPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMK 374
Query: 181 YLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYNKL 240
L+ L + +N +S Y+ + KSL L + N L
Sbjct: 375 SLQQLDISQNSVS------------------YDEK-----KGDCSWTKSLLSLNMSSNIL 411
Query: 241 SGSMPLSLGNLPNLATLDLHDNSLSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLK 300
+ ++ L P + LDLH N + SIP L L LN+ N L L
Sbjct: 412 TDTIFRCLP--PRIKVLDLHSNKI-KSIPKQVVKLEALQELNVASNQLKSVPDGIFDRLT 468
Query: 301 SLYGLGLSFNKLSGSIP 317
SL + L N S P
Sbjct: 469 SLQKIWLHTNPWDCSCP 485
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 233 LELGYNKLSGSMPLSLGNLPNLATLDLHDNSLS--GSIPLSFGNLTNLDILNLPHNSLS- 289
L+ N L+ ++ + G+L L TL L N L I + +L L++ NS+S
Sbjct: 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSY 388
Query: 290 GSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNLLFGSIPCEIGNLRY 349
+ KSL L +S N L+ +I L ++ +L L N + SIP ++ L
Sbjct: 389 DEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKI-KSIPKQVVKLEA 445
Query: 350 LFYLELGDNKLSGSIPHSL-GNLTNLATLYLFTNLLSGSIP 389
L L + N+L S+P + LT+L ++L TN S P
Sbjct: 446 LQELNVASNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 640 LDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCFKEMHGLVYIDISYNKL 695
L++S N++ E S + S+ L L ++HN + FK L Y+D+S+NKL
Sbjct: 26 LNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKL 81
Score = 34.7 bits (78), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 7/118 (5%)
Query: 436 IPKEYGNLVKLTLLVLSYNQL-QGPIPDLRNLTRLARVRLDRNHLTGNISESFGIHSNLS 494
+PK+ K T+L +S N + + D+ +L++L + + N + F + L
Sbjct: 15 VPKDLSQ--KTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELE 72
Query: 495 YINLSHKKFYGEISFDWGKFPNLGTLDVSANNITGI-LPPEIGDSPQLKVLDLSSNHI 551
Y++LSH K + NL LD+S N + + E G+ QLK L LS+ H+
Sbjct: 73 YLDLSHNKL---VKISCHPTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHL 127
Score = 30.4 bits (67), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 520 LDVSANNITGILPPEIGDSPQLKVLDLSSNHIVGEIPSE---LGKLRSLIKLTLNRNQFS 576
+D S N + + P ++ S + +L++S N+I S+ L KLR LI ++ NR Q+
Sbjct: 5 VDRSKNGLIHV-PKDL--SQKTTILNISQNYISELWTSDILSLSKLRILI-ISHNRIQYL 60
Query: 577 GQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFSGEIPIKLEKFIH 636
+ +LE+LDLS N+L + S V L +L+LS N F +PI ++F +
Sbjct: 61 DISVFKFNQ--ELEYLDLSHNKL---VKISCHPTVNLKHLDLSFNAFDA-LPI-CKEFGN 113
Query: 637 LSDLDLSHNFLGEEIPSQVCSMQSLEK---LNLAHNNLSGFI 675
+S L FLG S LEK L +AH N+S +
Sbjct: 114 MSQL----KFLG-------LSTTHLEKSSVLPIAHLNISKVL 144
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 89
Query: 871 YGFCSHAR------HSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+ + ++V E ++ +L ++ E + + ++ + + +L
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 143
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ I++RD+ N+++ + + DFG++++ S T T Y APE+
Sbjct: 144 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVIL 199
Query: 985 TMKVTEKSDVYSFGVLALEAIKGK--HP-RDFISS 1016
M E D++S G + E ++ K P RD+I
Sbjct: 200 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 234
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 40/181 (22%)
Query: 540 QLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRL 599
+++ LDL++ H+ G +PS + + SL KL LN N F S L L +
Sbjct: 278 RVQELDLTAAHLNG-LPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIK---- 332
Query: 600 SNSIPGSLGNLVKLYYLNLSNNQFSGEIPIK-LEKFIHLSDLDLSHNFLGEEIPSQVCSM 658
GN+ KL ++ + LEK +L LDLSH+ + S C++
Sbjct: 333 --------GNMRKL------------DLGTRCLEKLENLQKLDLSHSDIE---ASDCCNL 369
Query: 659 Q-----SLEKLNLAHNNLSGFIPRCFKEMHGLVYIDISYNKLHGPIPNSAAFKHAPMEAL 713
Q L+ LNL++N G + FKE L +D+++ LH P H+P + L
Sbjct: 370 QLKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTHLHVKAP------HSPFQNL 423
Query: 714 Q 714
Sbjct: 424 H 424
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 130/341 (38%), Gaps = 62/341 (18%)
Query: 85 VNSINLTSAGLIGTLHDFSFSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSF 144
V SINL L +F F + LDL + G+ PS I + LK L L++NSF
Sbjct: 255 VESINLQKHRF-SDLSSSTFRCFTRVQELDLTAAHLNGL-PSGIEGMNSLKKLVLNANSF 312
Query: 145 SGTIPPQIGNLSMLKILYLSTN---------------------------QFSGRIPPQIG 177
+ L+ LY+ N + S Q+
Sbjct: 313 DQLCQINAASFPSLRDLYIKGNMRKLDLGTRCLEKLENLQKLDLSHSDIEASDCCNLQLK 372
Query: 178 HLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSGSIP-SEIGNLKSLSGLELG 236
+L +L+ L+L N G + L ++ + L P S NL L L L
Sbjct: 373 NLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLS 432
Query: 237 YNKLSGSMPLSLGNLPNLATLDLHDNSLS-------------GSIPL------------- 270
+ L S L L +L L+L NS GS+ +
Sbjct: 433 HCLLDTSNQHLLAGLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLSIDQ 492
Query: 271 -SFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTIL 329
+F L N++ L+L HNSL+G + +LK LY L ++ N + P L L++ +I+
Sbjct: 493 QAFHGLRNVNHLDLSHNSLTGDSMDALSHLKGLY-LNMASNNIRIIPPHLLPALSQQSII 551
Query: 330 YLSDNLLFGSIPCEIGNLRYLFYLELGDNKLSGSIPHSLGN 370
LS N + C N+ ++ + + +KL S + N
Sbjct: 552 NLSHN----PLDCTCSNIHFITWYKENLHKLEDSEETTCAN 588
Score = 36.6 bits (83), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 106/264 (40%), Gaps = 18/264 (6%)
Query: 463 LRNLTRLARVRLDRNHLTGNISESFGIHSNLSYINLSHKKFYGEISFDWGKFPNLGTLDV 522
R TR+ + L HL G S G++S L + L+ F + FP+L L +
Sbjct: 273 FRCFTRVQELDLTAAHLNGLPSGIEGMNS-LKKLVLNANSFDQLCQINAASFPSLRDLYI 331
Query: 523 SANNITGILPPEIGDSPQ-LKVLDLSSNHIVGEIPS--ELGKLRSLIKLTLNRNQFSGQL 579
N L + + L+ LDLS + I +L LR L L L+ N+ G
Sbjct: 332 KGNMRKLDLGTRCLEKLENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLGLE 391
Query: 580 PTELGSLIQLEHLDLSSNRLSNSIPGS-LGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLS 638
QLE LD++ L P S NL L LNLS+ L L
Sbjct: 392 DQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQDLR 451
Query: 639 DLDLSHNFLGEEIPSQVCSMQ---SLEKLNLAHNNLSGFIPRCFKEMHGLVYIDISYNKL 695
L+L N + S+ +Q SLE L L+ NL + F + + ++D+S+N L
Sbjct: 452 HLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNVNHLDLSHNSL 511
Query: 696 HGPIPNSAAFKHAPMEALQGNKGL 719
G M+AL KGL
Sbjct: 512 TGD----------SMDALSHLKGL 525
Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 120/305 (39%), Gaps = 35/305 (11%)
Query: 416 FGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQL----QGPIPDLRNLTRLAR 471
F + + + + + N L I + +L KL L S++QL P LR+L
Sbjct: 276 FTRVQELDLTAAHLNGLPSGI-EGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIKGN 334
Query: 472 VR-LDRNHLTGNISESFGIHSNLSYINLSHKKFYGE--ISFDWGKFPNLGTLDVSANNIT 528
+R LD L E NL ++LSH + +L L++S N
Sbjct: 335 MRKLD---LGTRCLEKL---ENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPL 388
Query: 529 GILPPEIGDSPQLKVLDLSSNHIVGEIP-SELGKLRSLIKLTLNRNQFSGQLPTELGSLI 587
G+ + PQL++LD++ H+ + P S L L L L+ L L
Sbjct: 389 GLEDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQ 448
Query: 588 QLEHLDLSSNRLSN---------SIPGSLGNLV--KLYYLNLSNNQFSGEIPIKLEKFIH 636
L HL+L N + + GSL L+ L++ F G +
Sbjct: 449 DLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLSIDQQAFHG--------LRN 500
Query: 637 LSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCFKEMHGLVYIDISYNKLH 696
++ LDLSHN L + + ++ L LN+A NN+ P + I++S+N L
Sbjct: 501 VNHLDLSHNSLTGDSMDALSHLKGL-YLNMASNNIRIIPPHLLPALSQQSIINLSHNPLD 559
Query: 697 GPIPN 701
N
Sbjct: 560 CTCSN 564
Score = 34.3 bits (77), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 63/147 (42%)
Query: 92 SAGLIGTLHDFSFSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQ 151
S + T+ + +FS +L +LDL QI + ++ +L + L+ N
Sbjct: 40 SFNFLPTIQNTTFSRLINLIFLDLTRCQINWVHEDTFQSHHQLNTIVLTGNPLIFMAETS 99
Query: 152 IGNLSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYL 211
+ LK L+L+ S + +L L++LHL N +S P NL ++
Sbjct: 100 LTGPKFLKHLFLTQTGISNLEFIPVHNLENLESLHLGSNHISSINLPENFPTQNLKVLDF 159
Query: 212 YNNSLSGSIPSEIGNLKSLSGLELGYN 238
NN++ + +L+ + L L +N
Sbjct: 160 QNNAIHYISRKDTNSLEQATNLSLNFN 186
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment Of
Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment Of
Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 89
Query: 871 YGFCSHAR------HSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+ + ++V E ++ +L ++ E + + ++ + + +L
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 143
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ I++RD+ N+++ + + DFG++++ S T T Y APE+
Sbjct: 144 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVIL 199
Query: 985 TMKVTEKSDVYSFGVLALEAIKGK--HP-RDFISS 1016
M E D++S G + E ++ K P RD+I
Sbjct: 200 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 234
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 29/190 (15%)
Query: 855 EVKSLTEIR-HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNV 913
EV+ L + + HRN+++ F ++V+E + GS ILS+ + V
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS---ILSHIHKRRHFNELEASVV 116
Query: 914 IKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVS-----DFGISKSLKPDSS-- 966
++ VA AL +LHN I +RD+ +N+L E+ VS DFG+ +K +
Sbjct: 117 VQDVASALDFLHNK---GIAHRDLKPENIL--CEHPNQVSPVKICDFGLGSGIKLNGDCS 171
Query: 967 --NWTEL---AGTIGYVAPEL--AYTMKVT---EKSDVYSFGVLALEAIKGKHPRDFISS 1016
+ EL G+ Y+APE+ A++ + + ++ D++S GV+ + G P F+
Sbjct: 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP--FVGR 229
Query: 1017 ICSTSSNLDR 1026
C + DR
Sbjct: 230 -CGSDCGWDR 238
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 478 HLTGNISESFGIHSNLSYINLSH----KKFYGEISFDWGKFPNLGTLDVSANNITGILPP 533
HL+ N+ +F + + + Y L+ + ++ D G P LGTLD+S N + + P
Sbjct: 37 HLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQSL--P 93
Query: 534 EIGDS-PQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHL 592
+G + P L VLD+S N + L L L +L L N+ P L +LE L
Sbjct: 94 LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153
Query: 593 DLSSNRLSNSIPGSLGNLVKLYYLNLSNN 621
L++N+L+ G L L L L L N
Sbjct: 154 SLANNQLTELPAGLLNGLENLDTLLLQEN 182
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 225 GNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPL-SFGNLTNLDILNL 283
G L L L+L +N+L S+PL LP L LD+ N L+ S+PL + L L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYL 131
Query: 284 PHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGN-LTKLTILYLSDNLLFGSIP 341
N L P + L L L+ N+L+ +P+ L N L L L L +N L+ +IP
Sbjct: 132 KGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSLY-TIP 188
Score = 33.9 bits (76), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 560 GKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLS 619
G L L L L+ NQ LP +L L LD+S NRL++ G+L L +L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 620 NNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCF 679
N+ P L L L L++N L E + +++L+ L L N+L IP+ F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLYT-IPKGF 191
Query: 680 KEMHGLVY 687
H L +
Sbjct: 192 FGSHLLPF 199
Score = 31.2 bits (69), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 153 GNLSMLKILYLSTNQFSGRIPPQIGH-LSYLKALHLFENGLSGSIPPSLGNLTNLAIMYL 211
G L +L L LS NQ P +G L L L + N L+ +L L L +YL
Sbjct: 74 GTLPVLGTLDLSHNQLQSL--PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYL 131
Query: 212 YNNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGN-LPNLATLDLHDNSLSGSIPL 270
N L P + L L L N+L+ +P L N L NL TL L +NSL +IP
Sbjct: 132 KGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSLY-TIPK 189
Query: 271 SF 272
F
Sbjct: 190 GF 191
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 12/190 (6%)
Query: 818 GQGSVYRAELS--SGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRH-RNIVKFYGFC 874
G+ +V R +S +G+ A K F C+ E L+E+ L + ++ +
Sbjct: 40 GKFAVVRQCISKSTGQEYAAK-FLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY 98
Query: 875 SHARHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYLHNDCFPPIVY 934
+ ++ EY G + L AE + + +IK + + + YLH + IV+
Sbjct: 99 ENTSEIILILEYAAGGEI-FSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVH 154
Query: 935 RDISSKNVLLDLEY---EAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAYTMKVTEK 991
D+ +N+LL Y + + DFG+S+ + + E+ GT Y+APE+ +T
Sbjct: 155 LDLKPQNILLSSIYPLGDIKIVDFGMSRKIG-HACELREIMGTPEYLAPEILNYDPITTA 213
Query: 992 SDVYSFGVLA 1001
+D+++ G++A
Sbjct: 214 TDMWNIGIIA 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole
Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 87
Query: 871 YGFCSHAR------HSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+ + ++V E ++ +L ++ E + + ++ + + +L
Sbjct: 88 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 141
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ I++RD+ N+++ + + DFG++++ S T T Y APE+
Sbjct: 142 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVIL 197
Query: 985 TMKVTEKSDVYSFGVLALEAIKGK--HP-RDFISS 1016
M E D++S G + E ++ K P RD+I
Sbjct: 198 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 232
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A 1-Aryl-3,4-
Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
Length = 364
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 88
Query: 871 YGFCSHAR------HSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+ + ++V E ++ +L ++ E + + ++ + + +L
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ I++RD+ N+++ + + DFG++++ S T T Y APE+
Sbjct: 143 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVIL 198
Query: 985 TMKVTEKSDVYSFGVLALEAIKGK--HP-RDFISS 1016
M E D++S G + E ++ K P RD+I
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 88
Query: 871 YGFCSHAR------HSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+ + ++V E ++ +L ++ E + + ++ + + +L
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ I++RD+ N+++ + + DFG++++ S T T Y APE+
Sbjct: 143 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVIL 198
Query: 985 TMKVTEKSDVYSFGVLALEAIKGK--HP-RDFISS 1016
M E D++S G + E ++ K P RD+I
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
+++ EV L EI+H N++ + + ++ E + G L L+ S E T
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNV-LLDLEY---EAHVSDFGISKSLKPD 964
+ +K + + + YLH+ I + D+ +N+ LLD + DFG++ K D
Sbjct: 118 E---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KID 169
Query: 965 SSN-WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
N + + GT +VAPE+ + ++D++S GV+ + G P
Sbjct: 170 FGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 126
Query: 871 YGFCSHAR------HSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+ + ++V E ++ +L ++ E + + ++ + + +L
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 180
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ I++RD+ N+++ + + DFG++++ S T T Y APE+
Sbjct: 181 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVIL 236
Query: 985 TMKVTEKSDVYSFGVLALEAIKGK--HP-RDFISS 1016
M E D++S G + E ++ K P RD+I
Sbjct: 237 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 271
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 78/171 (45%), Gaps = 13/171 (7%)
Query: 462 DLRNLTRLARVRLDRN----HLTGNISESFGIHSNLSYINLSH----KKFYGEISFDWGK 513
D RNLT L L ++ HL+ N+ +F + + + Y L+ + ++ D G
Sbjct: 19 DKRNLTALPP-DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVD-GT 76
Query: 514 FPNLGTLDVSANNITGILPPEIGDS-PQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNR 572
P LGTLD+S N + + P +G + P L VLD+S N + L L L +L L
Sbjct: 77 LPVLGTLDLSHNQLQSL--PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKG 134
Query: 573 NQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQF 623
N+ P L +LE L L++N L+ G L L L L L N
Sbjct: 135 NELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 185
Score = 34.3 bits (77), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 560 GKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLS 619
G L L L L+ NQ LP +L L LD+S NRL++ G+L L +L L L
Sbjct: 75 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 133
Query: 620 NNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCF 679
N+ P L L L L++N L E + +++L+ L L N+L IP+ F
Sbjct: 134 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGF 192
Query: 680 KEMHGLVY 687
H L +
Sbjct: 193 FGSHLLPF 200
Score = 33.5 bits (75), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 225 GNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPL-SFGNLTNLDILNL 283
G L L L+L +N+L S+PL LP L LD+ N L+ S+PL + L L L L
Sbjct: 75 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYL 132
Query: 284 PHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGN-LTKLTILYLSDNLLFGSIP 341
N L P + L L L+ N L+ +P+ L N L L L L +N L+ +IP
Sbjct: 133 KGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY-TIP 189
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 93/225 (41%), Gaps = 36/225 (16%)
Query: 814 IGTGGQGSVYRAE-LSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIR-HRNIVKFY 871
+ GG VY A+ + SG A+K+ L +E + + EV + ++ H NIV+F
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRL---LSNEEEKNRAIIQEVCFMKKLSGHPNIVQF- 91
Query: 872 GFCSHA----------RHSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADAL 921
CS A + F++ L G L L S L + + A+
Sbjct: 92 --CSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAV 149
Query: 922 SYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLK--PDSSNWTELA------- 972
++H PPI++RD+ +N+LL + + DFG + ++ PD S W+
Sbjct: 150 QHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYS-WSAQRRALVEEE 207
Query: 973 ----GTIGYVAPE---LAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
T Y PE L + EK D+++ G + +HP
Sbjct: 208 ITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP 252
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 78/171 (45%), Gaps = 13/171 (7%)
Query: 462 DLRNLTRLARVRLDRN----HLTGNISESFGIHSNLSYINLSH----KKFYGEISFDWGK 513
D RNLT L L ++ HL+ N+ +F + + + Y L+ + ++ D G
Sbjct: 18 DKRNLTALPP-DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GT 75
Query: 514 FPNLGTLDVSANNITGILPPEIGDS-PQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNR 572
P LGTLD+S N + + P +G + P L VLD+S N + L L L +L L
Sbjct: 76 LPVLGTLDLSHNQLQSL--PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKG 133
Query: 573 NQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQF 623
N+ P L +LE L L++N L+ G L L L L L N
Sbjct: 134 NELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
Score = 33.9 bits (76), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 560 GKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLS 619
G L L L L+ NQ LP +L L LD+S NRL++ G+L L +L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 620 NNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCF 679
N+ P L L L L++N L E + +++L+ L L N+L IP+ F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGF 191
Query: 680 KEMHGLVY 687
H L +
Sbjct: 192 FGSHLLPF 199
Score = 33.5 bits (75), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 225 GNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPL-SFGNLTNLDILNL 283
G L L L+L +N+L S+PL LP L LD+ N L+ S+PL + L L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYL 131
Query: 284 PHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGN-LTKLTILYLSDNLLFGSIP 341
N L P + L L L+ N L+ +P+ L N L L L L +N L+ +IP
Sbjct: 132 KGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY-TIP 188
Score = 29.6 bits (65), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 56/134 (41%), Gaps = 6/134 (4%)
Query: 84 KVNSINLTSAGLIGTLHDFSFSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNS 143
++ +NL A L D + P L LDL NQ+ + P L LD+S N
Sbjct: 56 RLTQLNLDRAELTKLQVD---GTLPVLGTLDLSHNQLQSL-PLLGQTLPALTVLDVSFNR 111
Query: 144 FSGTIPPQIGNLSMLKILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGN- 202
+ + L L+ LYL N+ P + L+ L L N L+ +P L N
Sbjct: 112 LTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNG 170
Query: 203 LTNLAIMYLYNNSL 216
L NL + L NSL
Sbjct: 171 LENLDTLLLQENSL 184
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp
Length = 423
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 814 IGTGGQGSV---YRAELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTEIRHRNIVKF 870
IG+G QG V Y A L VA+KK P ++ ++ + E+ + + H+NI+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 126
Query: 871 YGFCSHAR------HSFIVYEYLEMGSLAMILSNATSAEELGWTQRMNVIKGVADALSYL 924
+ + ++V E ++ +L ++ E + + ++ + + +L
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 180
Query: 925 HNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTIGYVAPELAY 984
H+ I++RD+ N+++ + + DFG++++ S T T Y APE+
Sbjct: 181 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVIL 236
Query: 985 TMKVTEKSDVYSFGVLALEAIKGK--HP-RDFISS 1016
M E D++S G + E ++ K P RD+I
Sbjct: 237 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 271
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 462 DLRNLTRLARVRLDRN----HLTGNISESFGIHSNLSYINLSH----KKFYGEISFDWGK 513
D RNLT L L ++ HL+ N+ +F + + + Y L+ + ++ D G
Sbjct: 18 DKRNLTALPP-DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GT 75
Query: 514 FPNLGTLDVSANNITGILPPEIGDS-PQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNR 572
P LGTLD+S N + + P +G + P L VLD+S N + L L L +L L
Sbjct: 76 LPVLGTLDLSHNQLQSL--PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKG 133
Query: 573 NQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNN 621
N+ P L +LE L L++N L+ G L L L L L N
Sbjct: 134 NELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQEN 182
Score = 33.9 bits (76), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 560 GKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLS 619
G L L L L+ NQ LP +L L LD+S NRL++ G+L L +L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 620 NNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCF 679
N+ P L L L L++N L E + +++L+ L L N+L IP+ F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGF 191
Query: 680 KEMHGLVY 687
H L +
Sbjct: 192 FGSHLLPF 199
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 225 GNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPL-SFGNLTNLDILNL 283
G L L L+L +N+L S+PL LP L LD+ N L+ S+PL + L L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYL 131
Query: 284 PHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGN-LTKLTILYLSDNLLFGSIP 341
N L P + L L L+ N L+ +P+ L N L L L L +N L+ +IP
Sbjct: 132 KGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY-TIP 188
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 78/171 (45%), Gaps = 13/171 (7%)
Query: 462 DLRNLTRLARVRLDRN----HLTGNISESFGIHSNLSYINLSH----KKFYGEISFDWGK 513
D RNLT L L ++ HL+ N+ +F + + + Y L+ + ++ D G
Sbjct: 18 DKRNLTALPP-DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GT 75
Query: 514 FPNLGTLDVSANNITGILPPEIGDS-PQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNR 572
P LGTLD+S N + + P +G + P L VLD+S N + L L L +L L
Sbjct: 76 LPVLGTLDLSHNQLQSL--PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKG 133
Query: 573 NQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQF 623
N+ P L +LE L L++N L+ G L L L L L N
Sbjct: 134 NELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
Score = 33.9 bits (76), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 560 GKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLS 619
G L L L L+ NQ LP +L L LD+S NRL++ G+L L +L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 620 NNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCF 679
N+ P L L L L++N L E + +++L+ L L N+L IP+ F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGF 191
Query: 680 KEMHGLVY 687
H L +
Sbjct: 192 FGSHLLPF 199
Score = 33.5 bits (75), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 225 GNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPL-SFGNLTNLDILNL 283
G L L L+L +N+L S+PL LP L LD+ N L+ S+PL + L L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYL 131
Query: 284 PHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGN-LTKLTILYLSDNLLFGSIP 341
N L P + L L L+ N L+ +P+ L N L L L L +N L+ +IP
Sbjct: 132 KGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY-TIP 188
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 478 HLTGNISESFGIHSNLSYINLSH----KKFYGEISFDWGKFPNLGTLDVSANNITGILPP 533
HL+ N+ +F + + + Y L+ + ++ D G P LGTLD+S N + + P
Sbjct: 37 HLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQSL--P 93
Query: 534 EIGDS-PQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHL 592
+G + P L VLD+S N + L L L +L L N+ P L +LE L
Sbjct: 94 LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153
Query: 593 DLSSNRLSNSIPGSLGNLVKLYYLNLSNN 621
L++N+L+ G L L L L L N
Sbjct: 154 SLANNQLTELPAGLLNGLENLDTLLLQEN 182
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 225 GNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPL-SFGNLTNLDILNL 283
G L L L+L +N+L S+PL LP L LD+ N L+ S+PL + L L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYL 131
Query: 284 PHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGN-LTKLTILYLSDNLLFGSIP 341
N L P + L L L+ N+L+ +P+ L N L L L L +N L+ +IP
Sbjct: 132 KGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSLY-TIP 188
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 560 GKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLS 619
G L L L L+ NQ LP +L L LD+S NRL++ G+L L +L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 620 NNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCF 679
N+ P L L L L++N L E + +++L+ L L N+L IP+ F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLYT-IPKGF 191
Query: 680 KEMHGLVY 687
H L +
Sbjct: 192 FGSHLLPF 199
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 153 GNLSMLKILYLSTNQFSGRIPPQIGH-LSYLKALHLFENGLSGSIPPSLGNLTNLAIMYL 211
G L +L L LS NQ P +G L L L + N L+ +L L L +YL
Sbjct: 74 GTLPVLGTLDLSHNQLQSL--PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYL 131
Query: 212 YNNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGN-LPNLATLDLHDNSLSGSIPL 270
N L P + L L L N+L+ +P L N L NL TL L +NSL +IP
Sbjct: 132 KGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSLY-TIPK 189
Query: 271 SF 272
F
Sbjct: 190 GF 191
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 803 RATNDFDEEHCIGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
R T +F E IG+G GSV++ + G I A+K+ PL + +Q L EV +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYAHAV 64
Query: 862 I-RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS-NATSAEELGWTQRMNVIKGVAD 919
+ +H ++V+++ + H I EY GSLA +S N + +++ V
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLL 944
L Y+H+ +V+ DI N+ +
Sbjct: 125 GLRYIHS---MSLVHMDIKPSNIFI 146
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 803 RATNDFDEEHCIGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
R T +F E IG+G GSV++ + G I A+K+ PL + +Q L EV +
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYAHAV 66
Query: 862 I-RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS-NATSAEELGWTQRMNVIKGVAD 919
+ +H ++V+++ + H I EY GSLA +S N + +++ V
Sbjct: 67 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 126
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLL 944
L Y+H+ +V+ DI N+ +
Sbjct: 127 GLRYIHS---MSLVHMDIKPSNIFI 148
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 803 RATNDFDEEHCIGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
R T +F E IG+G GSV++ + G I A+K+ PL + +Q L EV +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYAHAV 64
Query: 862 I-RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS-NATSAEELGWTQRMNVIKGVAD 919
+ +H ++V+++ + H I EY GSLA +S N + +++ V
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLL 944
L Y+H+ +V+ DI N+ +
Sbjct: 125 GLRYIHS---MSLVHMDIKPSNIFI 146
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 61/239 (25%), Positives = 102/239 (42%), Gaps = 32/239 (13%)
Query: 786 FLSVLTFDRKIAYEEIVRATNDFDEEHC-----IGTGGQGSVYRAELSSGEIVAVKKFHS 840
LS +F RK + I D E IG G G VY GE VA++
Sbjct: 8 LLSARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWH-GE-VAIRLIDI 65
Query: 841 PLLSEMTCQQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNAT 900
+E + F EV + + RH N+V F G C H I+ + +L ++ +A
Sbjct: 66 ERDNEDQLKA-FKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAK 124
Query: 901 SAEELGWTQRM--NVIKGVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFG-- 956
++ T+++ ++KG + YLH I+++D+ SKNV D + ++DFG
Sbjct: 125 IVLDVNKTRQIAQEIVKG----MGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLF 176
Query: 957 -ISKSLKPD--SSNWTELAGTIGYVAPELAYTMK---------VTEKSDVYSFGVLALE 1003
IS L+ G + ++APE+ + ++ SDV++ G + E
Sbjct: 177 SISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYE 235
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 478 HLTGNISESFGIHSNLSYINLSH----KKFYGEISFDWGKFPNLGTLDVSANNITGILPP 533
HL+ N+ +F + + + Y L+ + ++ D G P LGTLD+S N + + P
Sbjct: 37 HLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQSL--P 93
Query: 534 EIGDS-PQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHL 592
+G + P L VLD+S N + L L L +L L N+ P L +LE L
Sbjct: 94 LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153
Query: 593 DLSSNRLSNSIPGSLGNLVKLYYLNLSNN 621
L++N+L+ G L L L L L N
Sbjct: 154 SLANNQLTELPAGLLNGLENLDTLLLQEN 182
Score = 35.0 bits (79), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 225 GNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPL-SFGNLTNLDILNL 283
G L L L+L +N+L S+PL LP L LD+ N L+ S+PL + L L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYL 131
Query: 284 PHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGN-LTKLTILYLSDNLLFGSIP 341
N L P + L L L+ N+L+ +P+ L N L L L L +N L+ +IP
Sbjct: 132 KGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSLY-TIP 188
Score = 33.9 bits (76), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 560 GKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLS 619
G L L L L+ NQ LP +L L LD+S NRL++ G+L L +L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 620 NNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCF 679
N+ P L L L L++N L E + +++L+ L L N+L IP+ F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLYT-IPKGF 191
Query: 680 KEMHGLVY 687
H L +
Sbjct: 192 FGSHLLPF 199
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 153 GNLSMLKILYLSTNQFSGRIPPQIGH-LSYLKALHLFENGLSGSIPPSLGNLTNLAIMYL 211
G L +L L LS NQ P +G L L L + N L+ +L L L +YL
Sbjct: 74 GTLPVLGTLDLSHNQLQSL--PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYL 131
Query: 212 YNNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGN-LPNLATLDLHDNSLSGSIPL 270
N L P + L L L N+L+ +P L N L NL TL L +NSL +IP
Sbjct: 132 KGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSLY-TIPK 189
Query: 271 SF 272
F
Sbjct: 190 GF 191
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase
Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 916 GVADALSYLHNDCFPPIVYRDISSKNVLLDLEYEAHVSDFGISKSLKPDSSNWTELAGTI 975
+ AL YL +++RD+ N+LLD + + DFGIS L D + AG
Sbjct: 132 AIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK-DRSAGCA 188
Query: 976 GYVAPELAYTMKVTE-----KSDVYSFGVLALEAIKGKHP 1010
Y+APE T+ ++DV+S G+ +E G+ P
Sbjct: 189 AYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 803 RATNDFDEEHCIGTGGQGSVYR-AELSSGEIVAVKKFHSPLLSEMTCQQEFLNEVKSLTE 861
R T +F E IG+G GSV++ + G I A+K+ PL + +Q L EV +
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYAHAV 62
Query: 862 I-RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS-NATSAEELGWTQRMNVIKGVAD 919
+ +H ++V+++ + H I EY GSLA +S N + +++ V
Sbjct: 63 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 122
Query: 920 ALSYLHNDCFPPIVYRDISSKNVLL 944
L Y+H+ +V+ DI N+ +
Sbjct: 123 GLRYIHS---MSLVHMDIKPSNIFI 144
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
+++ EV L EI+H N++ + + ++ E + G L L+ S E T
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNV-LLDLEY---EAHVSDFGISKSLKPD 964
+ +K + + + YLH+ I + D+ +N+ LLD + DFG++ K D
Sbjct: 118 E---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KID 169
Query: 965 SSN-WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
N + + GT +VAPE+ + ++D++S GV+ + G P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
+++ EV L EI+H N++ + + ++ E + G L L+ S E T
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNV-LLDLEY---EAHVSDFGISKSLKPD 964
+ +K + + + YLH+ I + D+ +N+ LLD + DFG++ K D
Sbjct: 118 E---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KID 169
Query: 965 SSN-WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
N + + GT +VAPE+ + ++D++S GV+ + G P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound
Inhibitor Fragment
Length = 293
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
+++ EV L EI+H N++ + + ++ E + G L L+ S E T
Sbjct: 57 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 116
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNV-LLDLEY---EAHVSDFGISKSLKPD 964
+ +K + + + YLH+ I + D+ +N+ LLD + DFG++ K D
Sbjct: 117 E---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KID 168
Query: 965 SSN-WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
N + + GT +VAPE+ + ++D++S GV+ + G P
Sbjct: 169 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
+++ EV L EI+H N++ + + ++ E + G L L+ S E T
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNV-LLDLEY---EAHVSDFGISKSLKPD 964
+ +K + + + YLH+ I + D+ +N+ LLD + DFG++ K D
Sbjct: 118 E---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KID 169
Query: 965 SSN-WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
N + + GT +VAPE+ + ++D++S GV+ + G P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic Domain
Of Death-Associated Protein Kinase With Atp Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
+++ EV L EI+H N++ + + ++ E + G L L+ S E T
Sbjct: 57 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 116
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNV-LLDLEY---EAHVSDFGISKSLKPD 964
+ +K + + + YLH+ I + D+ +N+ LLD + DFG++ K D
Sbjct: 117 E---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KID 168
Query: 965 SSN-WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
N + + GT +VAPE+ + ++D++S GV+ + G P
Sbjct: 169 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
Length = 285
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
+++ EV L EI+H N++ + + ++ E + G L L+ S E T
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNV-LLDLEY---EAHVSDFGISKSLKPD 964
+ +K + + + YLH+ I + D+ +N+ LLD + DFG++ K D
Sbjct: 118 E---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KID 169
Query: 965 SSN-WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
N + + GT +VAPE+ + ++D++S GV+ + G P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
+++ EV L EI+H N++ + + ++ E + G L L+ S E T
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNV-LLDLEY---EAHVSDFGISKSLKPD 964
+ +K + + + YLH+ I + D+ +N+ LLD + DFG++ K D
Sbjct: 118 E---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KID 169
Query: 965 SSN-WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
N + + GT +VAPE+ + ++D++S GV+ + G P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death
Associated Protein Kinase Catalytic Domain With Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death
Associated Protein Kinase Catalytic Domain
Length = 295
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
+++ EV L EI+H N++ + + ++ E + G L L+ S E T
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNV-LLDLEY---EAHVSDFGISKSLKPD 964
+ +K + + + YLH+ I + D+ +N+ LLD + DFG++ K D
Sbjct: 118 E---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KID 169
Query: 965 SSN-WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
N + + GT +VAPE+ + ++D++S GV+ + G P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In
Complex With Amppnp And Mg2+
Length = 295
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
+++ EV L EI+H N++ + + ++ E + G L L+ S E T
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNV-LLDLEY---EAHVSDFGISKSLKPD 964
+ +K + + + YLH+ I + D+ +N+ LLD + DFG++ K D
Sbjct: 118 E---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KID 169
Query: 965 SSN-WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
N + + GT +VAPE+ + ++D++S GV+ + G P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex
With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex
With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex
With Small Molecular Inhibitors
Length = 278
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
+++ EV L EI+H N++ + + ++ E + G L L+ S E T
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNV-LLDLEY---EAHVSDFGISKSLKPD 964
+ +K + + + YLH+ I + D+ +N+ LLD + DFG++ K D
Sbjct: 118 E---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KID 169
Query: 965 SSN-WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
N + + GT +VAPE+ + ++D++S GV+ + G P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
+++ EV L EI+H N++ + + ++ E + G L L+ S E T
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNV-LLDLEY---EAHVSDFGISKSLKPD 964
+ +K + + + YLH+ I + D+ +N+ LLD + DFG++ K D
Sbjct: 118 E---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KID 169
Query: 965 SSN-WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
N + + GT +VAPE+ + ++D++S GV+ + G P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 849 QQEFLNEVKSLTEIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNATSAEELGWT 908
+++ EV L EI+H N++ + + ++ E + G L L+ S E T
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 909 QRMNVIKGVADALSYLHNDCFPPIVYRDISSKNV-LLDLEY---EAHVSDFGISKSLKPD 964
+ +K + + + YLH+ I + D+ +N+ LLD + DFG++ K D
Sbjct: 118 E---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KID 169
Query: 965 SSN-WTELAGTIGYVAPELAYTMKVTEKSDVYSFGVLALEAIKGKHP 1010
N + + GT +VAPE+ + ++D++S GV+ + G P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 7/206 (3%)
Query: 508 SFDWGKFPNLGTLDVSANNIT--GILPPEIGDSPQLKVLDLSSNHIVGEIPSELGKLRSL 565
+F P+L LD+S N ++ G + LK LDLS N ++ + LG L L
Sbjct: 340 AFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLG-LEQL 398
Query: 566 IKLTLNRNQFSGQLPTELG-SLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQFS 624
L + + SL L +LD+S + G L L L ++ N F
Sbjct: 399 EHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ 458
Query: 625 GE-IPIKLEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCFKEMH 683
+P + +L+ LDLS L + P+ S+ SL+ LN++HNN +K ++
Sbjct: 459 ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLN 518
Query: 684 GLVYIDISYNKLHGPIPNSAAFKHAP 709
L +D S N H +H P
Sbjct: 519 SLQVLDYSLN--HIMTSKKQELQHFP 542
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 96/240 (40%), Gaps = 44/240 (18%)
Query: 102 FSFSSFPHLAYLDLRVN--QIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSMLK 159
FS P L +LDL N G + LKYLDLS F+G I
Sbjct: 341 FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLS---FNGVIT---------- 387
Query: 160 ILYLSTNQFSGRIPPQIGHLSY----LKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNS 215
+S+N F G Q+ HL + LK + F S+ SL NL L I + +
Sbjct: 388 ---MSSN-FLGL--EQLEHLDFQHSNLKQMSEF------SVFLSLRNLIYLDISHTHTRV 435
Query: 216 LSGSIPSEIGNLKSLSGLELGYNKLSGS-MPLSLGNLPNLATLDLHDNSLSGSIPLSFGN 274
I L SL L++ N + +P L NL LDL L P +F +
Sbjct: 436 AFNGI---FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNS 492
Query: 275 LTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGS-------IPSSLG--NLTK 325
L++L +LN+ HN+ L SL L S N + S PSSL NLT+
Sbjct: 493 LSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQ 552
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Query: 102 FSFSSFPHLAYLDLRVNQIFGIIPSQIANNSKLKYLDLSSNSFSGTIPPQIGNLSML-KI 160
+SF SFP L LDL +I I + S L L L+ N LS L K+
Sbjct: 46 YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKL 105
Query: 161 LYLSTNQFSGRIPPQIGHLSYLKALHLFENGL-SGSIPPSLGNLTNLAIMYLYNNSLSG 218
+ + TN S P IGHL LK L++ N + S +P NLTNL + L +N +
Sbjct: 106 VAVETNLASLENFP-IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Score = 37.7 bits (86), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 9/140 (6%)
Query: 416 FGNLTNMIVLSIYSNALSGAIPKEYGNLVKLTLLVLSYNQLQ-GPIPD----LRNLTRLA 470
F +L N+I L I A + L L +L ++ N Q +PD LRNLT L
Sbjct: 417 FLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 476
Query: 471 RVRLDRNHLTGNISESFGIHSNLSYINLSHKKFYGEISFDWGKFPNLGTLDVSANNITGI 530
+ L+ +F S+L +N+SH F+ +F + +L LD S N+I
Sbjct: 477 LSQCQLEQLSPT---AFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTS 533
Query: 531 LPPEIGDSP-QLKVLDLSSN 549
E+ P L L+L+ N
Sbjct: 534 KKQELQHFPSSLAFLNLTQN 553
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 76/180 (42%), Gaps = 37/180 (20%)
Query: 553 GEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNL-- 610
G+ P+ KL+SL +LT N+ G +E+ L LE LDLS N LS S +
Sbjct: 317 GQFPT--LKLKSLKRLTFTSNK-GGNAFSEV-DLPSLEFLDLSRNGLSFKGCCSQSDFGT 372
Query: 611 VKLYYLNLSNNQFSGEIPIK-----LEKFIHLS----------------------DLDLS 643
L YL+LS F+G I + LE+ HL LD+S
Sbjct: 373 TSLKYLDLS---FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDIS 429
Query: 644 HNFLGEEIPSQVCSMQSLEKLNLAHNNLS-GFIPRCFKEMHGLVYIDISYNKLHGPIPNS 702
H + SLE L +A N+ F+P F E+ L ++D+S +L P +
Sbjct: 430 HTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA 489
Score = 31.2 bits (69), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 559 LGKLRSLIKLTLNRNQF-SGQLPTELGSLIQLEHLDLSSNRLS 600
+G L++L +L + N S +LP +L LEHLDLSSN++
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162
Score = 30.4 bits (67), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 658 MQSLEKLNLAHNNLSGF-IPRCFKEMHGLVYIDISYNKLHG 697
+++L++LN+AHN + F +P F + L ++D+S NK+
Sbjct: 123 LKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 69/151 (45%), Gaps = 8/151 (5%)
Query: 478 HLTGNISESFGIHSNLSYINLSH----KKFYGEISFDWGKFPNLGTLDVSANNITGILPP 533
HL+ N+ +F + + + Y L+ + ++ D G P LGTLD+S N + + P
Sbjct: 37 HLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQSL--P 93
Query: 534 EIGDS-PQLKVLDLSSNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHL 592
+G + P L VLD+S N + L L L +L L N+ P L +LE L
Sbjct: 94 LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153
Query: 593 DLSSNRLSNSIPGSLGNLVKLYYLNLSNNQF 623
L++N L+ G L L L L L N
Sbjct: 154 SLANNNLTELPAGLLNGLENLDTLLLQENSL 184
Score = 33.9 bits (76), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 560 GKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLS 619
G L L L L+ NQ LP +L L LD+S NRL++ G+L L +L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 620 NNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCF 679
N+ P L L L L++N L E + +++L+ L L N+L IP+ F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGF 191
Query: 680 KEMHGLVY 687
H L +
Sbjct: 192 FGSHLLPF 199
Score = 33.5 bits (75), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 225 GNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNSLSGSIPL-SFGNLTNLDILNL 283
G L L L+L +N+L S+PL LP L LD+ N L+ S+PL + L L L L
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYL 131
Query: 284 PHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGN-LTKLTILYLSDNLLFGSIP 341
N L P + L L L+ N L+ +P+ L N L L L L +N L+ +IP
Sbjct: 132 KGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY-TIP 188
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 80/209 (38%), Gaps = 3/209 (1%)
Query: 488 GIHSNLSYINLSHKKFYGEISFDWGKFPNLGTLDVSANNITGILPPEIGDSPQLKVLDLS 547
GI +N +NL + + +L L +S N+I I L L+L
Sbjct: 61 GISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120
Query: 548 SNHIVGEIPSELGKLRSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSS-NRLSNSIPGS 606
N + L L +L L N + L LDL RLS G+
Sbjct: 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGA 180
Query: 607 LGNLVKLYYLNLSNNQFSGEIPIKLEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNL 666
L L YLNL+ EIP L I L +LDLS N L P + L+KL +
Sbjct: 181 FEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWM 238
Query: 667 AHNNLSGFIPRCFKEMHGLVYIDISYNKL 695
+ + F + LV I++++N L
Sbjct: 239 IQSQIQVIERNAFDNLQSLVEINLAHNNL 267
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 101/251 (40%), Gaps = 34/251 (13%)
Query: 448 LLVLSYNQLQG-PIPDLRNLTRLARVRLDRNHLTGNISESFGIHSNLSYINLSHKKFYGE 506
LL L NQ+Q + ++L L ++L RNH+ +F +NL+ + L +
Sbjct: 68 LLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTI 127
Query: 507 ISFDWGKFPNLGTLDVSANNITGILPPEIGDSPQLKVLDLSS----NHIVGEIPSELGKL 562
+ + L L + N I I P L+ LDL ++I L L
Sbjct: 128 PNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNL 187
Query: 563 RSLIKLTLNRNQFSGQLPTELGSLIQLEHLDLSSNRLSNSIPGSLGNLVKLYYLNLSNNQ 622
R L N + P LI+L+ LDLS N LS PGS L+ L L + +Q
Sbjct: 188 RYLNLAMCNLREIPNLTP-----LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQ 242
Query: 623 FSGEIPIKLEKFIHLSDLDLSHNFLGEEIPSQVCSMQSLEKLNLAHNNLSGFIPRCFKEM 682
+ I + D ++QSL ++NLAHNNL+ F +
Sbjct: 243 I---------QVIERNAFD---------------NLQSLVEINLAHNNLTLLPHDLFTPL 278
Query: 683 HGLVYIDISYN 693
H L I + +N
Sbjct: 279 HHLERIHLHHN 289
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 88/211 (41%), Gaps = 4/211 (1%)
Query: 159 KILYLSTNQFSGRIPPQIGHLSYLKALHLFENGLSGSIPPSLGNLTNLAIMYLYNNSLSG 218
++L L NQ HL +L+ L L N + + L NL + L++N L+
Sbjct: 67 RLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTT 126
Query: 219 SIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHD-NSLSGSIPLSFGNLTN 277
L L L L N + + +P+L LDL + LS +F L+N
Sbjct: 127 IPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSN 186
Query: 278 LDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNLTKLTILYLSDNLLF 337
L LNL +L IP+ + L L L LS N LS P S L L L++ + +
Sbjct: 187 LRYLNLAMCNLR-EIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ 244
Query: 338 GSIPCEIGNLRYLFYLELGDNKLSGSIPHSL 368
NL+ L + L N L+ +PH L
Sbjct: 245 VIERNAFDNLQSLVEINLAHNNLT-LLPHDL 274
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 80/196 (40%), Gaps = 39/196 (19%)
Query: 204 TNLAIMYLYNNSLSGSIPSEIGNLKSLSGLELGYNKLSGSMPLSLGNLPNLATLDLHDNS 263
TN ++ L+ N + + +L+ L L+L N + + L NL TL+L DN
Sbjct: 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123
Query: 264 LSGSIPLSFGNLTNLDILNLPHNSLSGSIPSEMGNLKSLYGLGLSFNKLSGSIPSSLGNL 323
L+ +F L+ L L L +N + SIPS +FN++ LG L
Sbjct: 124 LTTIPNGAFVYLSKLKELWLRNNPIE-SIPS------------YAFNRIPSLRRLDLGEL 170
Query: 324 TKLTILYLSDNLLFGSIPCEIGNLRYLFY-------------------LELGDNKLSGSI 364
+L+ Y+S+ G + NLRYL L+L N LS
Sbjct: 171 KRLS--YISEGAFEG-----LSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIR 223
Query: 365 PHSLGNLTNLATLYLF 380
P S L +L L++
Sbjct: 224 PGSFQGLMHLQKLWMI 239
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,767,133
Number of Sequences: 62578
Number of extensions: 1251844
Number of successful extensions: 6620
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 536
Number of HSP's that attempted gapping in prelim test: 2992
Number of HSP's gapped (non-prelim): 1911
length of query: 1077
length of database: 14,973,337
effective HSP length: 109
effective length of query: 968
effective length of database: 8,152,335
effective search space: 7891460280
effective search space used: 7891460280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)