Query 001446
Match_columns 1075
No_of_seqs 643 out of 3708
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 01:02:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001446.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001446hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0055 Multidrug/pheromone ex 100.0 2E-128 4E-133 1162.9 74.9 967 6-1065 192-1201(1228)
2 KOG0054 Multidrug resistance-a 100.0 1E-125 3E-130 1167.3 85.3 950 9-1065 365-1350(1381)
3 PLN03130 ABC transporter C fam 100.0 2E-112 5E-117 1114.9 95.3 951 8-1065 463-1449(1622)
4 PLN03232 ABC transporter C fam 100.0 2E-111 5E-116 1107.7 92.7 950 8-1065 463-1446(1495)
5 TIGR00957 MRP_assoc_pro multi 100.0 3E-108 6E-113 1080.3 90.8 960 8-1065 480-1496(1522)
6 PTZ00265 multidrug resistance 100.0 4E-107 9E-112 1055.6 92.0 982 12-1065 224-1435(1466)
7 PTZ00243 ABC transporter; Prov 100.0 2E-104 5E-109 1038.8 89.5 796 194-1065 672-1521(1560)
8 TIGR01271 CFTR_protein cystic 100.0 8E-103 2E-107 1024.8 93.0 958 10-1065 246-1428(1490)
9 KOG0058 Peptide exporter, ABC 100.0 1.8E-77 3.9E-82 684.3 44.9 470 537-1065 194-679 (716)
10 KOG0060 Long-chain acyl-CoA tr 100.0 5.5E-72 1.2E-76 617.2 47.9 570 477-1074 63-651 (659)
11 COG1123 ATPase components of v 100.0 4.9E-66 1.1E-70 584.4 38.4 198 181-386 5-230 (539)
12 KOG0055 Multidrug/pheromone ex 100.0 3.5E-65 7.6E-70 615.5 38.7 456 551-1065 91-564 (1228)
13 COG4178 ABC-type uncharacteriz 100.0 8.6E-63 1.9E-67 564.9 54.0 519 506-1070 57-594 (604)
14 TIGR00954 3a01203 Peroxysomal 100.0 1E-61 2.2E-66 592.7 66.9 566 478-1070 78-659 (659)
15 PRK13549 xylose transporter AT 100.0 3.4E-64 7.5E-69 601.8 41.7 197 181-386 5-218 (506)
16 COG2274 SunT ABC-type bacterio 100.0 8.6E-63 1.9E-67 590.6 52.7 461 546-1065 209-684 (709)
17 PRK10261 glutathione transport 100.0 1.2E-63 2.5E-68 607.8 41.5 199 180-386 11-244 (623)
18 PRK09700 D-allose transporter 100.0 4E-63 8.8E-68 593.8 43.5 197 181-386 5-220 (510)
19 PRK10762 D-ribose transporter 100.0 3.2E-63 6.9E-68 592.7 40.9 197 181-386 4-216 (501)
20 KOG0064 Peroxisomal long-chain 100.0 4.7E-62 1E-66 529.2 45.6 567 478-1074 100-693 (728)
21 PRK15134 microcin C ABC transp 100.0 3.2E-63 6.8E-68 596.8 40.5 198 181-386 5-232 (529)
22 TIGR03269 met_CoM_red_A2 methy 100.0 4.7E-63 1E-67 594.6 40.7 196 182-386 1-244 (520)
23 PRK11288 araG L-arabinose tran 100.0 8.3E-63 1.8E-67 589.2 40.9 197 181-386 4-215 (501)
24 TIGR02633 xylG D-xylose ABC tr 100.0 1.9E-62 4.1E-67 587.1 42.0 196 182-386 2-216 (500)
25 TIGR00958 3a01208 Conjugate Tr 100.0 3E-61 6.6E-66 596.8 53.1 459 550-1065 220-690 (711)
26 PRK15064 ABC transporter ATP-b 100.0 3E-61 6.5E-66 579.8 49.4 192 181-386 1-227 (530)
27 PRK11174 cysteine/glutathione 100.0 9.9E-61 2.2E-65 584.7 54.2 459 553-1065 85-560 (588)
28 COG1132 MdlB ABC-type multidru 100.0 9.6E-61 2.1E-65 581.2 52.6 460 548-1065 69-540 (567)
29 TIGR02868 CydC thiol reductant 100.0 1.8E-60 3.9E-65 575.0 54.5 439 558-1049 80-529 (529)
30 COG4172 ABC-type uncharacteriz 100.0 3.1E-62 6.6E-67 516.9 33.1 199 180-386 5-233 (534)
31 PRK15439 autoinducer 2 ABC tra 100.0 1.5E-61 3.2E-66 578.4 42.8 194 180-386 10-215 (510)
32 PRK11819 putative ABC transpor 100.0 1.7E-60 3.6E-65 574.7 51.7 193 180-386 5-235 (556)
33 PRK10982 galactose/methyl gala 100.0 1.3E-61 2.9E-66 577.9 38.2 194 184-386 1-209 (491)
34 KOG0057 Mitochondrial Fe/S clu 100.0 4.5E-60 9.7E-65 522.1 47.0 207 834-1065 349-562 (591)
35 PRK10938 putative molybdenum t 100.0 2.8E-61 6E-66 575.6 39.8 189 181-386 3-210 (490)
36 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 3.9E-60 8.5E-65 571.6 48.6 201 181-386 4-233 (552)
37 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.1E-59 2.4E-64 584.0 53.9 452 554-1065 199-661 (686)
38 KOG0056 Heavy metal exporter H 100.0 1.3E-62 2.9E-67 527.4 22.0 262 772-1065 481-749 (790)
39 TIGR01193 bacteriocin_ABC ABC- 100.0 3.7E-59 8.1E-64 581.3 53.8 457 553-1065 218-685 (708)
40 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 4.4E-59 9.6E-64 581.5 53.9 461 554-1065 217-688 (710)
41 PRK10636 putative ABC transpor 100.0 5.7E-59 1.2E-63 566.5 51.0 192 181-386 1-221 (638)
42 TIGR00956 3a01205 Pleiotropic 100.0 1.2E-58 2.7E-63 602.6 54.5 201 836-1064 759-979 (1394)
43 PRK11160 cysteine/glutathione 100.0 4.6E-58 1E-62 556.2 55.1 456 553-1065 82-550 (574)
44 TIGR03375 type_I_sec_LssB type 100.0 4.6E-58 1E-62 570.3 54.7 456 552-1065 208-676 (694)
45 PRK11176 lipid transporter ATP 100.0 5.1E-58 1.1E-62 560.6 54.0 453 556-1065 90-555 (582)
46 PRK11147 ABC transporter ATPas 100.0 5.4E-58 1.2E-62 560.0 51.5 191 836-1064 319-514 (635)
47 COG4987 CydC ABC-type transpor 100.0 1.2E-57 2.6E-62 502.8 47.9 422 594-1065 114-549 (573)
48 TIGR01257 rim_protein retinal- 100.0 3.7E-56 8E-61 574.7 69.0 199 180-386 927-1135(2272)
49 TIGR02857 CydD thiol reductant 100.0 1.5E-57 3.2E-62 549.7 51.9 451 552-1061 65-529 (529)
50 TIGR02203 MsbA_lipidA lipid A 100.0 2.5E-57 5.5E-62 554.1 53.1 460 556-1065 79-544 (571)
51 PRK10790 putative multidrug tr 100.0 3E-57 6.6E-62 553.9 53.1 445 560-1065 94-551 (592)
52 PRK13657 cyclic beta-1,2-gluca 100.0 1.3E-56 2.8E-61 547.4 52.1 457 554-1065 75-546 (588)
53 COG4988 CydD ABC-type transpor 100.0 5.9E-56 1.3E-60 499.3 52.8 474 538-1065 43-531 (559)
54 PLN03073 ABC transporter F fam 100.0 1.6E-57 3.5E-62 553.5 42.1 193 835-1065 507-701 (718)
55 COG5265 ATM1 ABC-type transpor 100.0 1.1E-57 2.5E-62 486.4 31.8 260 775-1065 208-474 (497)
56 TIGR01846 type_I_sec_HlyB type 100.0 1.3E-55 2.7E-60 547.9 54.2 456 552-1065 200-668 (694)
57 TIGR02204 MsbA_rel ABC transpo 100.0 1.1E-55 2.4E-60 539.8 51.7 456 553-1065 80-551 (576)
58 PRK13409 putative ATPase RIL; 100.0 8.4E-57 1.8E-61 538.6 37.8 182 187-386 79-286 (590)
59 COG0488 Uup ATPase components 100.0 2.7E-55 5.8E-60 509.8 46.1 191 181-386 3-225 (530)
60 TIGR01192 chvA glucan exporter 100.0 1.3E-54 2.8E-59 526.6 54.3 463 550-1065 71-546 (585)
61 PRK10789 putative multidrug tr 100.0 7.2E-55 1.6E-59 528.4 50.8 450 558-1065 63-526 (569)
62 PLN03140 ABC transporter G fam 100.0 2.6E-54 5.7E-59 558.7 55.1 207 836-1063 867-1095(1470)
63 TIGR01842 type_I_sec_PrtD type 100.0 1.4E-53 3E-58 515.5 56.0 448 554-1065 69-530 (544)
64 KOG0060 Long-chain acyl-CoA tr 100.0 3E-55 6.4E-60 484.7 34.1 389 2-396 243-651 (659)
65 KOG0058 Peptide exporter, ABC 100.0 9.3E-55 2E-59 497.9 34.4 370 4-401 307-690 (716)
66 TIGR01194 cyc_pep_trnsptr cycl 100.0 6.9E-53 1.5E-57 509.0 50.4 461 547-1065 69-547 (555)
67 COG4178 ABC-type uncharacteriz 100.0 2.6E-53 5.5E-58 486.9 39.7 364 4-390 225-592 (604)
68 PTZ00265 multidrug resistance 100.0 1.6E-52 3.5E-57 545.4 52.1 488 545-1065 111-656 (1466)
69 COG2274 SunT ABC-type bacterio 100.0 2E-52 4.3E-57 501.3 38.6 369 5-400 313-694 (709)
70 PRK10522 multidrug transporter 100.0 6.3E-50 1.4E-54 483.4 48.4 246 779-1065 275-526 (547)
71 COG1129 MglA ABC-type sugar tr 100.0 8.5E-51 1.9E-55 457.7 36.9 198 180-386 7-220 (500)
72 COG4618 ArpD ABC-type protease 100.0 2E-49 4.3E-54 433.1 42.4 254 777-1065 286-548 (580)
73 TIGR00954 3a01203 Peroxysomal 100.0 3.2E-49 7E-54 482.8 46.3 382 2-391 256-658 (659)
74 PRK11174 cysteine/glutathione 100.0 1.5E-49 3.3E-54 486.2 42.8 372 7-399 185-569 (588)
75 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2.8E-49 6.1E-54 491.0 43.3 364 5-398 295-669 (686)
76 TIGR00958 3a01208 Conjugate Tr 100.0 2.1E-49 4.6E-54 491.1 42.0 368 4-399 320-699 (711)
77 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.4E-49 5.2E-54 494.0 42.5 373 5-398 313-696 (710)
78 KOG0057 Mitochondrial Fe/S clu 100.0 7.2E-49 1.6E-53 433.5 38.3 356 16-400 206-572 (591)
79 COG4988 CydD ABC-type transpor 100.0 2E-48 4.3E-53 438.5 41.1 346 26-398 182-539 (559)
80 PLN03232 ABC transporter C fam 100.0 8.8E-48 1.9E-52 506.6 53.8 441 560-1065 366-816 (1495)
81 TIGR01193 bacteriocin_ABC ABC- 100.0 1.1E-48 2.4E-53 487.5 41.7 368 4-397 314-692 (708)
82 PLN03130 ABC transporter C fam 100.0 1.2E-47 2.6E-52 504.6 53.4 244 778-1065 566-816 (1622)
83 TIGR03375 type_I_sec_LssB type 100.0 2.4E-48 5.2E-53 483.3 42.2 367 4-397 304-683 (694)
84 COG4987 CydC ABC-type transpor 100.0 1.5E-48 3.3E-53 430.8 35.3 358 15-401 189-560 (573)
85 PRK11176 lipid transporter ATP 100.0 2.7E-48 5.9E-53 474.9 41.2 366 4-397 184-562 (582)
86 COG3845 ABC-type uncharacteriz 100.0 1.9E-48 4.2E-53 427.5 35.2 197 181-386 4-215 (501)
87 KOG0064 Peroxisomal long-chain 100.0 2.4E-49 5.1E-54 430.4 25.0 391 1-397 280-694 (728)
88 TIGR02868 CydC thiol reductant 100.0 1.2E-47 2.6E-52 463.4 41.1 334 16-372 185-529 (529)
89 TIGR02203 MsbA_lipidA lipid A 100.0 1.4E-47 3E-52 468.3 41.3 357 5-386 174-542 (571)
90 PRK11160 cysteine/glutathione 100.0 4.9E-47 1.1E-51 459.9 43.0 361 10-398 186-558 (574)
91 PRK13657 cyclic beta-1,2-gluca 100.0 3.3E-47 7.2E-52 464.6 41.6 368 5-398 176-554 (588)
92 COG1132 MdlB ABC-type multidru 100.0 3.3E-47 7.3E-52 462.6 40.4 361 13-401 180-551 (567)
93 TIGR02857 CydD thiol reductant 100.0 5.7E-47 1.2E-51 457.5 42.0 352 7-384 166-529 (529)
94 PRK10790 putative multidrug tr 100.0 7.8E-47 1.7E-51 462.2 41.9 355 15-400 195-561 (592)
95 TIGR02204 MsbA_rel ABC transpo 100.0 1.5E-46 3.2E-51 459.4 41.1 359 5-387 178-550 (576)
96 KOG0056 Heavy metal exporter H 100.0 1.4E-47 3E-52 412.0 26.2 346 32-403 406-762 (790)
97 TIGR01846 type_I_sec_HlyB type 100.0 3.6E-46 7.9E-51 463.3 41.5 356 5-386 298-666 (694)
98 COG1126 GlnQ ABC-type polar am 100.0 8E-48 1.7E-52 379.1 18.5 197 181-386 2-211 (240)
99 TIGR01842 type_I_sec_PrtD type 100.0 2.3E-45 5E-50 443.8 43.5 349 10-386 166-528 (544)
100 TIGR01192 chvA glucan exporter 100.0 3E-45 6.4E-50 444.8 42.5 356 7-387 178-545 (585)
101 PRK10789 putative multidrug tr 100.0 4.1E-45 8.9E-50 443.1 42.1 350 10-386 162-524 (569)
102 COG4618 ArpD ABC-type protease 100.0 1.6E-44 3.4E-49 394.8 37.8 336 24-387 198-547 (580)
103 COG1116 TauB ABC-type nitrate/ 100.0 9.2E-46 2E-50 377.7 22.7 199 181-388 3-208 (248)
104 PTZ00243 ABC transporter; Prov 100.0 2.6E-44 5.7E-49 472.6 42.3 359 23-400 1136-1531(1560)
105 COG1135 AbcC ABC-type metal io 100.0 3.3E-46 7.1E-51 386.8 18.6 205 181-395 1-224 (339)
106 TIGR00957 MRP_assoc_pro multi 100.0 3.9E-44 8.4E-49 472.9 42.0 352 22-400 1142-1506(1522)
107 KOG0927 Predicted transporter 100.0 6.2E-44 1.4E-48 392.3 29.2 181 836-1053 389-570 (614)
108 COG1136 SalX ABC-type antimicr 100.0 1.7E-44 3.8E-49 369.6 19.8 198 182-387 2-218 (226)
109 COG1125 OpuBA ABC-type proline 100.0 6.5E-45 1.4E-49 365.0 16.1 197 181-386 1-211 (309)
110 COG2884 FtsE Predicted ATPase 100.0 1.6E-44 3.6E-49 346.9 17.4 198 181-386 1-212 (223)
111 COG5265 ATM1 ABC-type transpor 100.0 1.5E-43 3.3E-48 378.4 25.7 348 26-402 125-486 (497)
112 TIGR01271 CFTR_protein cystic 100.0 2.6E-42 5.5E-47 454.0 42.9 352 23-399 1063-1437(1490)
113 TIGR01194 cyc_pep_trnsptr cycl 100.0 5.3E-42 1.1E-46 414.3 37.4 348 13-386 180-545 (555)
114 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 4.1E-43 8.9E-48 364.4 22.8 198 180-386 3-214 (254)
115 KOG0054 Multidrug resistance-a 100.0 2.6E-40 5.7E-45 410.6 51.3 446 557-1065 264-719 (1381)
116 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.4E-43 3.1E-48 385.7 18.6 207 835-1065 1-213 (275)
117 COG1120 FepC ABC-type cobalami 100.0 6.3E-43 1.4E-47 365.3 22.2 198 181-387 2-215 (258)
118 PRK10522 multidrug transporter 100.0 7.5E-41 1.6E-45 404.4 39.5 239 127-386 276-524 (547)
119 COG1126 GlnQ ABC-type polar am 100.0 8.6E-43 1.9E-47 343.6 17.3 197 836-1064 2-212 (240)
120 COG3638 ABC-type phosphate/pho 100.0 1.4E-42 3E-47 346.7 18.1 198 181-386 3-223 (258)
121 COG1135 AbcC ABC-type metal io 100.0 6.7E-43 1.4E-47 362.2 14.9 203 837-1065 2-219 (339)
122 COG3839 MalK ABC-type sugar tr 100.0 2.7E-42 5.8E-47 374.7 20.2 197 181-386 3-209 (338)
123 COG1117 PstB ABC-type phosphat 100.0 9.5E-43 2.1E-47 341.0 14.3 201 180-386 6-223 (253)
124 COG1117 PstB ABC-type phosphat 100.0 4.6E-43 1E-47 343.2 12.0 204 835-1061 6-221 (253)
125 COG1124 DppF ABC-type dipeptid 100.0 5.8E-42 1.3E-46 345.6 19.6 197 181-387 3-218 (252)
126 COG3842 PotA ABC-type spermidi 100.0 3.1E-42 6.8E-47 376.2 18.0 199 180-387 4-213 (352)
127 COG1127 Ttg2A ABC-type transpo 100.0 1E-41 2.2E-46 341.5 18.6 198 180-386 7-221 (263)
128 COG1122 CbiO ABC-type cobalt t 100.0 1.4E-41 3.1E-46 356.6 19.9 199 181-387 3-215 (235)
129 COG1118 CysA ABC-type sulfate/ 100.0 1.4E-41 3.1E-46 351.1 17.6 198 181-387 2-214 (345)
130 COG2884 FtsE Predicted ATPase 100.0 1E-41 2.2E-46 327.7 15.2 202 837-1064 2-213 (223)
131 PRK14257 phosphate ABC transpo 100.0 3.2E-41 7E-46 376.9 21.7 210 827-1065 74-301 (329)
132 KOG0062 ATPase component of AB 100.0 3.9E-40 8.4E-45 360.5 28.4 190 835-1061 361-551 (582)
133 COG3840 ThiQ ABC-type thiamine 100.0 1.4E-40 3.1E-45 316.6 18.0 195 182-387 2-206 (231)
134 COG1136 SalX ABC-type antimicr 100.0 8.4E-41 1.8E-45 342.5 17.1 204 837-1065 2-219 (226)
135 TIGR02314 ABC_MetN D-methionin 100.0 2.4E-40 5.1E-45 370.1 20.4 198 181-386 1-216 (343)
136 TIGR00960 3a0501s02 Type II (G 100.0 5.3E-40 1.1E-44 349.4 20.2 197 182-386 2-213 (216)
137 PRK11650 ugpC glycerol-3-phosp 100.0 1.1E-39 2.3E-44 368.3 22.0 198 181-386 3-210 (356)
138 COG4181 Predicted ABC-type tra 100.0 1.3E-39 2.7E-44 306.6 17.7 198 181-386 6-221 (228)
139 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2E-39 4.2E-44 337.0 20.2 205 836-1065 4-215 (254)
140 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.5E-39 3.3E-44 346.5 20.0 197 182-386 1-215 (218)
141 PRK11432 fbpC ferric transport 100.0 3E-39 6.5E-44 363.4 21.8 198 180-386 5-212 (351)
142 cd03293 ABC_NrtD_SsuB_transpor 100.0 4.1E-39 8.9E-44 343.4 21.6 197 182-386 1-207 (220)
143 cd03226 ABC_cobalt_CbiO_domain 100.0 4.1E-39 8.9E-44 339.4 20.8 192 183-386 1-201 (205)
144 COG1116 TauB ABC-type nitrate/ 100.0 3.3E-39 7.1E-44 329.7 18.7 200 836-1065 3-208 (248)
145 COG1124 DppF ABC-type dipeptid 100.0 3.3E-39 7.2E-44 325.7 18.2 203 836-1065 3-219 (252)
146 cd03259 ABC_Carb_Solutes_like 100.0 3.8E-39 8.3E-44 342.0 19.4 196 182-386 1-206 (213)
147 TIGR02673 FtsE cell division A 100.0 6.2E-39 1.3E-43 340.8 20.2 197 182-386 2-212 (214)
148 cd03223 ABCD_peroxisomal_ALDP 100.0 1.5E-38 3.2E-43 322.0 21.6 166 182-390 1-166 (166)
149 PRK13647 cbiO cobalt transport 100.0 7.5E-39 1.6E-43 351.6 20.9 199 181-387 4-214 (274)
150 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.7E-38 3.7E-43 345.9 23.4 198 181-386 2-211 (275)
151 TIGR03265 PhnT2 putative 2-ami 100.0 6.1E-39 1.3E-43 361.6 20.5 198 181-387 4-211 (353)
152 cd03261 ABC_Org_Solvent_Resist 100.0 7.2E-39 1.6E-43 345.2 20.1 196 182-386 1-212 (235)
153 COG1120 FepC ABC-type cobalami 100.0 5.8E-39 1.3E-43 335.6 17.7 206 836-1065 2-216 (258)
154 cd03292 ABC_FtsE_transporter F 100.0 1E-38 2.2E-43 339.4 19.8 197 182-386 1-211 (214)
155 PRK11248 tauB taurine transpor 100.0 2.6E-38 5.7E-43 343.4 23.1 197 181-386 1-204 (255)
156 PRK11629 lolD lipoprotein tran 100.0 1.9E-38 4.2E-43 341.2 21.8 198 181-386 5-220 (233)
157 PRK09452 potA putrescine/sperm 100.0 1.6E-38 3.5E-43 359.6 22.1 198 180-386 13-220 (375)
158 cd03235 ABC_Metallic_Cations A 100.0 1.4E-38 3.1E-43 337.7 20.3 194 184-386 2-207 (213)
159 TIGR02211 LolD_lipo_ex lipopro 100.0 1.7E-38 3.8E-43 339.2 21.1 197 182-386 2-216 (221)
160 cd03225 ABC_cobalt_CbiO_domain 100.0 9.9E-39 2.1E-43 338.5 19.0 196 183-386 1-209 (211)
161 PRK13637 cbiO cobalt transport 100.0 1.5E-38 3.3E-43 351.2 21.2 197 182-386 3-220 (287)
162 TIGR03258 PhnT 2-aminoethylpho 100.0 1.1E-38 2.4E-43 359.7 20.5 198 180-386 4-214 (362)
163 PRK13650 cbiO cobalt transport 100.0 1.8E-38 4E-43 349.4 21.1 198 181-386 4-215 (279)
164 cd03296 ABC_CysA_sulfate_impor 100.0 2.9E-38 6.4E-43 341.1 21.8 197 181-386 2-212 (239)
165 PRK13631 cbiO cobalt transport 100.0 2.5E-38 5.4E-43 352.8 21.9 200 179-386 19-251 (320)
166 cd03266 ABC_NatA_sodium_export 100.0 1.7E-38 3.6E-43 338.6 19.5 197 182-386 2-211 (218)
167 COG4555 NatA ABC-type Na+ tran 100.0 3.1E-39 6.6E-44 313.1 12.2 198 181-386 1-208 (245)
168 PRK10908 cell division protein 100.0 3.2E-38 6.9E-43 337.1 21.3 197 182-386 2-212 (222)
169 PRK11153 metN DL-methionine tr 100.0 2.4E-38 5.2E-43 357.3 21.3 198 181-386 1-216 (343)
170 cd03301 ABC_MalK_N The N-termi 100.0 2.8E-38 6.1E-43 335.5 20.5 196 182-386 1-206 (213)
171 PRK13651 cobalt transporter AT 100.0 2.5E-38 5.4E-43 350.7 20.9 197 182-386 3-240 (305)
172 PRK10851 sulfate/thiosulfate t 100.0 3.5E-38 7.6E-43 355.5 22.4 197 181-386 2-212 (353)
173 PRK13643 cbiO cobalt transport 100.0 2.6E-38 5.5E-43 349.6 20.6 198 181-386 1-219 (288)
174 PRK11000 maltose/maltodextrin 100.0 3E-38 6.5E-43 359.2 21.6 197 181-386 3-209 (369)
175 COG3839 MalK ABC-type sugar tr 100.0 1.1E-38 2.4E-43 346.5 17.1 202 836-1064 3-210 (338)
176 PRK11247 ssuB aliphatic sulfon 100.0 7.6E-38 1.6E-42 338.9 23.6 192 180-386 11-209 (257)
177 TIGR02315 ABC_phnC phosphonate 100.0 4.3E-38 9.3E-43 341.3 21.6 197 182-386 2-221 (243)
178 cd03265 ABC_DrrA DrrA is the A 100.0 2.8E-38 6E-43 337.0 19.6 196 182-386 1-207 (220)
179 PRK14257 phosphate ABC transpo 100.0 6.2E-38 1.3E-42 350.5 23.1 206 177-386 76-299 (329)
180 cd03263 ABC_subfamily_A The AB 100.0 2.8E-38 6E-43 337.4 19.2 197 182-386 1-207 (220)
181 PRK10584 putative ABC transpor 100.0 6.8E-38 1.5E-42 336.1 22.1 199 180-386 5-221 (228)
182 PRK13537 nodulation ABC transp 100.0 3.4E-38 7.3E-43 350.7 20.3 198 180-386 6-213 (306)
183 PRK11607 potG putrescine trans 100.0 4.7E-38 1E-42 356.7 21.6 198 180-386 18-225 (377)
184 cd03256 ABC_PhnC_transporter A 100.0 6.5E-38 1.4E-42 339.6 21.8 197 182-386 1-220 (241)
185 TIGR01186 proV glycine betaine 100.0 2.3E-38 5.1E-43 355.7 18.8 186 193-386 4-205 (363)
186 COG1131 CcmA ABC-type multidru 100.0 3.1E-38 6.8E-43 347.0 19.4 198 181-386 4-212 (293)
187 PRK13634 cbiO cobalt transport 100.0 4E-38 8.6E-43 348.4 20.1 197 182-386 3-221 (290)
188 PRK13636 cbiO cobalt transport 100.0 5.6E-38 1.2E-42 346.3 21.2 199 180-386 4-217 (283)
189 cd03269 ABC_putative_ATPase Th 100.0 4.7E-38 1E-42 332.9 19.7 196 182-386 1-203 (210)
190 TIGR02314 ABC_MetN D-methionin 100.0 3.2E-38 6.9E-43 352.9 19.3 203 837-1065 2-218 (343)
191 PRK13644 cbiO cobalt transport 100.0 5.5E-38 1.2E-42 344.7 20.8 198 181-386 1-210 (274)
192 PRK13635 cbiO cobalt transport 100.0 6.9E-38 1.5E-42 344.5 21.3 198 181-386 5-215 (279)
193 COG3638 ABC-type phosphate/pho 100.0 2.5E-38 5.5E-43 316.2 16.1 212 836-1065 3-225 (258)
194 cd03268 ABC_BcrA_bacitracin_re 100.0 7.2E-38 1.6E-42 330.9 20.6 192 182-386 1-201 (208)
195 TIGR00960 3a0501s02 Type II (G 100.0 3.4E-38 7.3E-43 335.5 18.2 203 837-1065 2-215 (216)
196 cd03264 ABC_drug_resistance_li 100.0 4.8E-38 1E-42 333.0 19.1 195 182-386 1-204 (211)
197 PRK13646 cbiO cobalt transport 100.0 5.7E-38 1.2E-42 346.8 20.2 197 182-386 3-221 (286)
198 PRK09536 btuD corrinoid ABC tr 100.0 1.1E-37 2.4E-42 354.5 22.8 198 181-387 3-215 (402)
199 cd03244 ABCC_MRP_domain2 Domai 100.0 8.2E-38 1.8E-42 334.0 20.2 208 835-1065 1-214 (221)
200 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 9.3E-38 2E-42 336.6 20.6 196 182-386 2-207 (236)
201 PRK13632 cbiO cobalt transport 100.0 8.7E-38 1.9E-42 343.2 20.7 199 180-386 6-217 (271)
202 cd03258 ABC_MetN_methionine_tr 100.0 8.7E-38 1.9E-42 336.5 20.2 197 182-386 2-216 (233)
203 PRK10247 putative ABC transpor 100.0 1.5E-37 3.3E-42 331.9 21.9 199 180-389 6-215 (225)
204 cd03252 ABCC_Hemolysin The ABC 100.0 2.5E-37 5.4E-42 333.8 23.7 199 182-386 1-211 (237)
205 cd03223 ABCD_peroxisomal_ALDP 100.0 1E-37 2.2E-42 315.9 19.2 166 837-1068 1-166 (166)
206 cd03262 ABC_HisP_GlnQ_permease 100.0 9.9E-38 2.2E-42 331.5 20.0 196 182-386 1-210 (213)
207 KOG0065 Pleiotropic drug resis 100.0 1.3E-35 2.8E-40 358.6 40.7 189 195-386 128-337 (1391)
208 cd03260 ABC_PstB_phosphate_tra 100.0 1.1E-37 2.4E-42 334.3 20.4 198 182-386 1-215 (227)
209 COG4525 TauB ABC-type taurine 100.0 5.2E-38 1.1E-42 302.1 15.9 205 181-393 3-215 (259)
210 COG1125 OpuBA ABC-type proline 100.0 2.9E-38 6.4E-43 317.2 14.7 199 837-1065 2-213 (309)
211 cd03254 ABCC_Glucan_exporter_l 100.0 2.5E-37 5.4E-42 332.1 23.1 201 181-387 2-213 (229)
212 cd03250 ABCC_MRP_domain1 Domai 100.0 4.2E-37 9.1E-42 323.9 24.2 191 182-386 1-202 (204)
213 cd03288 ABCC_SUR2 The SUR doma 100.0 1E-37 2.2E-42 340.1 20.1 209 834-1065 17-231 (257)
214 cd03219 ABC_Mj1267_LivG_branch 100.0 7.3E-38 1.6E-42 337.9 18.7 196 182-386 1-218 (236)
215 cd03244 ABCC_MRP_domain2 Domai 100.0 3.6E-37 7.8E-42 329.0 23.7 199 181-386 2-212 (221)
216 TIGR01288 nodI ATP-binding ABC 100.0 1E-37 2.3E-42 347.7 20.1 197 181-386 4-210 (303)
217 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 4.8E-38 1E-42 335.0 16.6 203 837-1065 1-217 (218)
218 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.1E-37 2.5E-42 337.2 19.8 198 182-387 1-212 (242)
219 PRK14250 phosphate ABC transpo 100.0 2.9E-37 6.3E-42 333.4 22.8 194 181-387 3-208 (241)
220 cd03250 ABCC_MRP_domain1 Domai 100.0 2.1E-37 4.6E-42 326.1 21.1 194 837-1064 1-203 (204)
221 cd03298 ABC_ThiQ_thiamine_tran 100.0 2.3E-37 5E-42 327.8 21.5 194 182-386 1-204 (211)
222 cd03218 ABC_YhbG The ABC trans 100.0 1.2E-37 2.6E-42 335.3 19.6 196 182-386 1-208 (232)
223 cd03245 ABCC_bacteriocin_expor 100.0 4.4E-37 9.5E-42 328.1 23.6 200 181-386 2-213 (220)
224 PRK13536 nodulation factor exp 100.0 1.4E-37 3E-42 348.8 20.6 198 180-386 40-247 (340)
225 cd03252 ABCC_Hemolysin The ABC 100.0 1.2E-37 2.7E-42 336.2 19.4 207 837-1065 1-213 (237)
226 PRK13652 cbiO cobalt transport 100.0 1.9E-37 4.1E-42 341.3 21.1 198 181-386 3-213 (277)
227 PRK13631 cbiO cobalt transport 100.0 7.7E-38 1.7E-42 348.8 18.0 202 835-1065 20-253 (320)
228 COG4619 ABC-type uncharacteriz 100.0 5.2E-38 1.1E-42 294.7 13.9 185 193-386 14-209 (223)
229 cd03257 ABC_NikE_OppD_transpor 100.0 2.6E-37 5.7E-42 332.0 21.2 197 182-386 2-221 (228)
230 PRK13641 cbiO cobalt transport 100.0 1.7E-37 3.7E-42 343.2 20.2 198 181-386 2-220 (287)
231 COG1122 CbiO ABC-type cobalt t 100.0 1.3E-37 2.7E-42 326.8 18.0 201 836-1065 3-216 (235)
232 cd03259 ABC_Carb_Solutes_like 100.0 9.2E-38 2E-42 331.4 17.1 202 837-1065 1-208 (213)
233 PRK13633 cobalt transporter AT 100.0 2.6E-37 5.7E-42 340.7 21.3 198 181-386 4-219 (280)
234 COG3842 PotA ABC-type spermidi 100.0 7.3E-38 1.6E-42 341.9 16.5 201 835-1065 4-214 (352)
235 cd03254 ABCC_Glucan_exporter_l 100.0 1.7E-37 3.7E-42 333.5 18.9 209 835-1065 1-214 (229)
236 cd03245 ABCC_bacteriocin_expor 100.0 2.4E-37 5.2E-42 330.2 19.7 209 835-1065 1-215 (220)
237 cd03226 ABC_cobalt_CbiO_domain 100.0 1.2E-37 2.6E-42 328.3 17.2 196 838-1064 1-202 (205)
238 TIGR03608 L_ocin_972_ABC putat 100.0 1.3E-37 2.8E-42 328.7 17.4 192 184-384 1-206 (206)
239 PRK11831 putative ABC transpor 100.0 2.6E-37 5.6E-42 339.0 20.3 198 180-386 6-219 (269)
240 PRK13639 cbiO cobalt transport 100.0 2.8E-37 6.1E-42 339.6 20.3 197 182-386 2-212 (275)
241 cd03253 ABCC_ATM1_transporter 100.0 7.6E-37 1.6E-41 330.0 23.3 199 182-386 1-210 (236)
242 PRK13640 cbiO cobalt transport 100.0 3.2E-37 7E-42 340.1 20.7 199 180-386 4-218 (282)
243 cd03292 ABC_FtsE_transporter F 100.0 2.1E-37 4.5E-42 329.3 18.5 202 837-1064 1-212 (214)
244 PRK13638 cbiO cobalt transport 100.0 2.5E-37 5.5E-42 339.7 19.6 197 181-386 1-211 (271)
245 PRK13548 hmuV hemin importer A 100.0 7.3E-37 1.6E-41 333.3 22.8 197 181-386 2-216 (258)
246 cd03224 ABC_TM1139_LivF_branch 100.0 3.4E-37 7.4E-42 329.6 19.9 194 182-386 1-207 (222)
247 TIGR00972 3a0107s01c2 phosphat 100.0 4.5E-37 9.8E-42 333.6 21.1 197 181-386 1-218 (247)
248 TIGR02673 FtsE cell division A 100.0 2.5E-37 5.5E-42 328.5 18.6 202 837-1064 2-213 (214)
249 PRK11650 ugpC glycerol-3-phosp 100.0 2.1E-37 4.6E-42 349.6 19.1 204 836-1065 3-212 (356)
250 PRK15079 oligopeptide ABC tran 100.0 4.4E-37 9.5E-42 344.0 21.4 199 180-386 7-237 (331)
251 PRK13649 cbiO cobalt transport 100.0 3.2E-37 6.9E-42 340.9 20.0 197 182-386 3-220 (280)
252 TIGR01277 thiQ thiamine ABC tr 100.0 6.6E-37 1.4E-41 324.5 21.4 194 182-386 1-204 (213)
253 PRK13645 cbiO cobalt transport 100.0 3.7E-37 8E-42 341.5 20.2 199 180-386 5-226 (289)
254 PRK10070 glycine betaine trans 100.0 5.5E-37 1.2E-41 348.5 21.9 183 196-386 42-240 (400)
255 PRK13648 cbiO cobalt transport 100.0 4.6E-37 1E-41 337.3 20.6 199 180-386 6-217 (269)
256 PRK09493 glnQ glutamine ABC tr 100.0 5.8E-37 1.3E-41 331.5 20.7 196 182-386 2-211 (240)
257 COG3840 ThiQ ABC-type thiamine 100.0 2.6E-37 5.5E-42 294.4 15.6 203 837-1068 2-210 (231)
258 cd03253 ABCC_ATM1_transporter 100.0 3.9E-37 8.5E-42 332.3 19.2 207 837-1065 1-212 (236)
259 cd03294 ABC_Pro_Gly_Bertaine T 100.0 3.1E-37 6.7E-42 338.1 18.6 195 183-386 26-236 (269)
260 PRK10575 iron-hydroxamate tran 100.0 1.1E-36 2.4E-41 333.6 22.6 198 180-386 10-223 (265)
261 cd03261 ABC_Org_Solvent_Resist 100.0 3.8E-37 8.2E-42 331.8 18.7 203 837-1065 1-214 (235)
262 PRK13642 cbiO cobalt transport 100.0 6.7E-37 1.4E-41 337.0 20.9 198 181-386 4-215 (277)
263 TIGR02315 ABC_phnC phosphonate 100.0 4.4E-37 9.6E-42 333.4 19.2 211 837-1065 2-223 (243)
264 cd03290 ABCC_SUR1_N The SUR do 100.0 2.1E-36 4.5E-41 322.1 23.8 197 183-386 2-216 (218)
265 cd03251 ABCC_MsbA MsbA is an e 100.0 1.6E-36 3.4E-41 327.1 23.0 200 182-387 1-212 (234)
266 cd03248 ABCC_TAP TAP, the Tran 100.0 5.3E-37 1.1E-41 328.8 19.2 202 179-386 9-223 (226)
267 TIGR03522 GldA_ABC_ATP gliding 100.0 5.4E-37 1.2E-41 341.3 19.9 197 181-386 2-207 (301)
268 cd03290 ABCC_SUR1_N The SUR do 100.0 9.7E-37 2.1E-41 324.7 21.0 204 838-1064 2-217 (218)
269 cd03296 ABC_CysA_sulfate_impor 100.0 6.9E-37 1.5E-41 330.5 19.8 206 837-1065 3-214 (239)
270 TIGR02982 heterocyst_DevA ABC 100.0 8E-37 1.7E-41 325.6 20.0 197 182-386 2-216 (220)
271 PRK11432 fbpC ferric transport 100.0 4.5E-37 9.7E-42 345.8 19.0 201 835-1065 5-214 (351)
272 PRK11629 lolD lipoprotein tran 100.0 7E-37 1.5E-41 329.0 19.7 204 836-1065 5-222 (233)
273 TIGR03411 urea_trans_UrtD urea 100.0 1.2E-36 2.7E-41 329.5 21.8 197 181-386 2-217 (242)
274 PRK11264 putative amino-acid A 100.0 6.8E-37 1.5E-41 333.2 19.8 197 181-386 3-219 (250)
275 TIGR02211 LolD_lipo_ex lipopro 100.0 8E-37 1.7E-41 326.3 19.7 202 837-1064 2-217 (221)
276 PRK10744 pstB phosphate transp 100.0 1.4E-36 3.1E-41 331.9 22.0 199 179-386 11-230 (260)
277 PRK11124 artP arginine transpo 100.0 1E-36 2.2E-41 329.9 20.7 197 181-386 2-216 (242)
278 PRK14242 phosphate transporter 100.0 9.5E-37 2.1E-41 332.5 20.5 198 180-386 5-223 (253)
279 PRK13637 cbiO cobalt transport 100.0 3.9E-37 8.4E-42 340.0 17.6 203 837-1065 3-222 (287)
280 cd03248 ABCC_TAP TAP, the Tran 100.0 7.1E-37 1.5E-41 327.8 19.0 207 834-1064 9-224 (226)
281 cd03369 ABCC_NFT1 Domain 2 of 100.0 2.4E-36 5.1E-41 318.9 22.7 186 179-386 4-198 (207)
282 PRK13647 cbiO cobalt transport 100.0 6E-37 1.3E-41 336.5 18.9 204 836-1065 4-215 (274)
283 cd03266 ABC_NatA_sodium_export 100.0 3.9E-37 8.5E-42 328.0 16.8 203 837-1065 2-213 (218)
284 cd03256 ABC_PhnC_transporter A 100.0 6.6E-37 1.4E-41 331.7 18.7 211 837-1065 1-222 (241)
285 COG4175 ProV ABC-type proline/ 100.0 3E-37 6.4E-42 318.8 15.1 192 197-398 43-250 (386)
286 PRK10771 thiQ thiamine transpo 100.0 2.4E-36 5.2E-41 324.7 22.8 194 182-386 2-205 (232)
287 cd03268 ABC_BcrA_bacitracin_re 100.0 5.5E-37 1.2E-41 324.2 17.5 198 837-1065 1-203 (208)
288 PRK14273 phosphate ABC transpo 100.0 1.3E-36 2.9E-41 331.4 21.1 198 180-386 6-224 (254)
289 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2E-36 4.4E-41 326.9 22.3 200 182-387 1-213 (238)
290 PRK11308 dppF dipeptide transp 100.0 1.7E-36 3.7E-41 339.0 22.4 199 180-386 4-230 (327)
291 PRK10619 histidine/lysine/argi 100.0 1.3E-36 2.8E-41 331.9 20.9 198 180-386 4-227 (257)
292 PRK13650 cbiO cobalt transport 100.0 7E-37 1.5E-41 336.9 18.8 204 836-1065 4-217 (279)
293 cd03235 ABC_Metallic_Cations A 100.0 6E-37 1.3E-41 325.2 17.6 200 838-1063 1-207 (213)
294 cd03288 ABCC_SUR2 The SUR doma 100.0 3.5E-36 7.5E-41 328.1 24.0 201 179-386 17-229 (257)
295 PRK14259 phosphate ABC transpo 100.0 2.7E-36 5.8E-41 330.7 23.2 199 178-386 10-228 (269)
296 PRK14268 phosphate ABC transpo 100.0 1.4E-36 3E-41 331.6 20.9 198 180-386 11-228 (258)
297 PRK11231 fecE iron-dicitrate t 100.0 2.1E-36 4.5E-41 329.9 22.2 198 181-387 2-214 (255)
298 PRK14269 phosphate ABC transpo 100.0 1.5E-36 3.3E-41 329.0 21.1 197 181-386 2-216 (246)
299 TIGR02769 nickel_nikE nickel i 100.0 1.2E-36 2.6E-41 333.3 20.3 198 181-386 2-226 (265)
300 cd03301 ABC_MalK_N The N-termi 100.0 1E-36 2.2E-41 323.6 19.1 202 837-1065 1-208 (213)
301 cd03263 ABC_subfamily_A The AB 100.0 7.5E-37 1.6E-41 326.3 18.1 203 837-1065 1-209 (220)
302 TIGR03005 ectoine_ehuA ectoine 100.0 1.3E-36 2.9E-41 331.0 20.4 196 182-386 1-222 (252)
303 cd03293 ABC_NrtD_SsuB_transpor 100.0 1E-36 2.2E-41 325.0 18.5 202 837-1067 1-211 (220)
304 cd03369 ABCC_NFT1 Domain 2 of 100.0 1.5E-36 3.2E-41 320.5 19.5 195 828-1065 1-200 (207)
305 PRK10908 cell division protein 100.0 1.4E-36 3E-41 324.4 19.3 200 837-1065 2-214 (222)
306 PRK14235 phosphate transporter 100.0 2.5E-36 5.4E-41 330.8 21.7 199 179-386 17-237 (267)
307 PRK13538 cytochrome c biogenes 100.0 2.3E-36 5E-41 317.9 20.5 192 181-384 1-202 (204)
308 COG1127 Ttg2A ABC-type transpo 100.0 8.6E-37 1.9E-41 306.1 16.3 205 835-1068 7-226 (263)
309 cd03231 ABC_CcmA_heme_exporter 100.0 3.1E-36 6.7E-41 315.9 21.4 188 182-384 1-198 (201)
310 PRK10253 iron-enterobactin tra 100.0 2.7E-36 5.8E-41 330.5 21.8 198 180-386 6-219 (265)
311 cd03246 ABCC_Protease_Secretio 100.0 2.6E-36 5.7E-41 308.5 20.2 160 182-386 1-170 (173)
312 TIGR03410 urea_trans_UrtE urea 100.0 1.5E-36 3.3E-41 326.1 19.4 193 182-386 1-207 (230)
313 PRK10895 lipopolysaccharide AB 100.0 2.5E-36 5.5E-41 326.7 21.2 197 181-386 3-212 (241)
314 PRK11300 livG leucine/isoleuci 100.0 2.8E-36 6.1E-41 329.4 21.7 197 181-386 5-229 (255)
315 TIGR03415 ABC_choXWV_ATP choli 100.0 2.3E-36 5.1E-41 340.7 21.1 186 194-387 36-241 (382)
316 TIGR01188 drrA daunorubicin re 100.0 9.4E-37 2E-41 339.8 17.7 185 194-386 5-199 (302)
317 cd03225 ABC_cobalt_CbiO_domain 100.0 1.2E-36 2.5E-41 322.6 17.6 201 838-1064 1-210 (211)
318 TIGR03873 F420-0_ABC_ATP propo 100.0 3.4E-36 7.5E-41 328.3 21.7 197 182-387 2-213 (256)
319 cd03251 ABCC_MsbA MsbA is an e 100.0 1.8E-36 3.8E-41 326.7 19.0 207 837-1065 1-213 (234)
320 cd03264 ABC_drug_resistance_li 100.0 1.7E-36 3.6E-41 321.3 18.5 201 837-1065 1-206 (211)
321 TIGR00968 3a0106s01 sulfate AB 100.0 2.8E-36 6.1E-41 324.8 20.4 197 182-387 1-207 (237)
322 cd03247 ABCC_cytochrome_bd The 100.0 2.9E-36 6.3E-41 309.9 19.6 163 182-386 1-171 (178)
323 COG1137 YhbG ABC-type (unclass 100.0 1.5E-37 3.3E-42 301.0 9.2 197 181-386 4-214 (243)
324 cd03260 ABC_PstB_phosphate_tra 100.0 1.2E-36 2.7E-41 326.1 17.4 205 837-1065 1-217 (227)
325 PRK14247 phosphate ABC transpo 100.0 3E-36 6.5E-41 328.0 20.6 197 181-386 3-220 (250)
326 COG0410 LivF ABC-type branched 100.0 4.6E-36 1E-40 301.0 20.2 196 181-386 3-212 (237)
327 PRK13646 cbiO cobalt transport 100.0 1.6E-36 3.5E-41 335.2 18.8 204 837-1066 3-224 (286)
328 cd03219 ABC_Mj1267_LivG_branch 100.0 1.1E-36 2.3E-41 328.8 16.9 212 837-1065 1-220 (236)
329 KOG0066 eIF2-interacting prote 100.0 2.3E-35 4.9E-40 313.6 26.3 188 836-1061 586-773 (807)
330 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2E-36 4.3E-41 327.1 18.7 207 837-1065 1-214 (238)
331 TIGR03265 PhnT2 putative 2-ami 100.0 1.6E-36 3.6E-41 341.9 18.8 203 836-1065 4-212 (353)
332 PRK11614 livF leucine/isoleuci 100.0 3.5E-36 7.7E-41 324.7 20.6 195 181-386 5-212 (237)
333 cd03262 ABC_HisP_GlnQ_permease 100.0 2.7E-36 5.8E-41 320.5 19.0 203 837-1065 1-212 (213)
334 PRK14250 phosphate ABC transpo 100.0 1.9E-36 4.1E-41 327.1 18.0 199 836-1065 3-209 (241)
335 PRK13543 cytochrome c biogenes 100.0 5.1E-36 1.1E-40 317.5 21.0 195 180-386 10-212 (214)
336 PRK11247 ssuB aliphatic sulfon 100.0 2.8E-36 6.1E-41 326.6 19.3 194 836-1065 12-211 (257)
337 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.4E-36 7.3E-41 319.0 19.5 200 837-1065 1-206 (211)
338 PRK10851 sulfate/thiosulfate t 100.0 2.6E-36 5.6E-41 340.3 19.7 206 837-1065 3-214 (353)
339 TIGR03740 galliderm_ABC gallid 100.0 5.2E-36 1.1E-40 320.2 20.9 192 182-386 1-199 (223)
340 PRK11022 dppD dipeptide transp 100.0 5.1E-36 1.1E-40 335.5 21.6 198 181-386 3-229 (326)
341 PRK13636 cbiO cobalt transport 100.0 2.5E-36 5.4E-41 333.2 18.8 204 836-1065 5-219 (283)
342 COG4559 ABC-type hemin transpo 100.0 3.3E-36 7.2E-41 294.3 17.4 197 181-386 1-216 (259)
343 PRK11153 metN DL-methionine tr 100.0 2.4E-36 5.2E-41 341.0 19.0 203 837-1065 2-218 (343)
344 PRK15112 antimicrobial peptide 100.0 4E-36 8.6E-41 329.3 20.2 198 181-386 4-225 (267)
345 cd03300 ABC_PotA_N PotA is an 100.0 3.8E-36 8.2E-41 323.0 19.6 196 182-386 1-206 (232)
346 PRK09544 znuC high-affinity zi 100.0 1.2E-35 2.6E-40 321.2 23.6 185 181-386 4-196 (251)
347 cd03234 ABCG_White The White s 100.0 4.4E-36 9.6E-41 321.3 19.9 198 181-386 3-219 (226)
348 TIGR01166 cbiO cobalt transpor 100.0 1.4E-36 3E-41 316.1 15.6 174 193-374 3-189 (190)
349 PRK14237 phosphate transporter 100.0 7E-36 1.5E-40 327.3 21.7 199 179-386 18-237 (267)
350 cd03269 ABC_putative_ATPase Th 100.0 3.7E-36 7.9E-41 318.4 18.8 200 837-1065 1-205 (210)
351 PRK13540 cytochrome c biogenes 100.0 5.5E-36 1.2E-40 313.9 19.9 187 182-382 2-197 (200)
352 PRK14248 phosphate ABC transpo 100.0 7.7E-36 1.7E-40 327.7 22.0 198 180-386 20-238 (268)
353 PRK14251 phosphate ABC transpo 100.0 5.9E-36 1.3E-40 325.9 20.8 197 181-386 4-221 (251)
354 TIGR03258 PhnT 2-aminoethylpho 100.0 1.5E-36 3.3E-41 342.5 16.6 205 834-1065 3-216 (362)
355 PRK11248 tauB taurine transpor 100.0 6.3E-36 1.4E-40 324.8 20.9 202 837-1068 2-209 (255)
356 PRK15056 manganese/iron transp 100.0 1.1E-35 2.5E-40 326.5 23.0 196 181-384 6-215 (272)
357 PRK13539 cytochrome c biogenes 100.0 8.4E-36 1.8E-40 314.1 21.0 192 181-386 2-200 (207)
358 COG1123 ATPase components of v 100.0 6.2E-36 1.4E-40 339.6 21.3 207 179-395 278-512 (539)
359 PRK13643 cbiO cobalt transport 100.0 3.2E-36 6.9E-41 332.9 18.5 200 837-1065 2-221 (288)
360 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 5.1E-36 1.1E-40 323.1 19.6 202 837-1065 2-209 (236)
361 PRK13632 cbiO cobalt transport 100.0 4.8E-36 1E-40 329.4 19.6 204 836-1065 7-219 (271)
362 TIGR01978 sufC FeS assembly AT 100.0 5.1E-36 1.1E-40 325.3 19.6 197 182-386 1-220 (243)
363 PRK14270 phosphate ABC transpo 100.0 8.1E-36 1.8E-40 324.6 21.2 199 180-387 3-222 (251)
364 PRK14274 phosphate ABC transpo 100.0 8.2E-36 1.8E-40 326.0 21.2 198 180-386 11-229 (259)
365 PRK09984 phosphonate/organopho 100.0 1.2E-35 2.7E-40 325.2 22.5 197 181-386 4-228 (262)
366 cd03218 ABC_YhbG The ABC trans 100.0 3E-36 6.5E-41 324.5 17.1 202 837-1065 1-210 (232)
367 cd03295 ABC_OpuCA_Osmoprotecti 100.0 4.6E-36 1E-40 324.6 18.6 203 837-1065 1-213 (242)
368 cd03224 ABC_TM1139_LivF_branch 100.0 2.8E-36 6E-41 322.6 16.6 200 837-1065 1-209 (222)
369 PRK13547 hmuV hemin importer A 100.0 1.2E-35 2.5E-40 324.6 21.9 196 182-386 2-230 (272)
370 PRK11000 maltose/maltodextrin 100.0 2.9E-36 6.4E-41 342.9 17.8 203 836-1065 3-211 (369)
371 cd03258 ABC_MetN_methionine_tr 100.0 4.7E-36 1E-40 323.0 18.5 203 837-1065 2-218 (233)
372 PRK14267 phosphate ABC transpo 100.0 7.9E-36 1.7E-40 325.3 20.4 197 181-386 4-223 (253)
373 PRK14269 phosphate ABC transpo 100.0 4.5E-36 9.8E-41 325.4 18.4 209 836-1065 2-218 (246)
374 PRK14239 phosphate transporter 100.0 1.1E-35 2.5E-40 324.0 21.5 198 181-387 5-223 (252)
375 PRK09452 potA putrescine/sperm 100.0 4.6E-36 1E-40 339.7 19.0 200 836-1065 14-222 (375)
376 PRK14254 phosphate ABC transpo 100.0 1.7E-35 3.7E-40 326.2 23.1 198 179-386 37-255 (285)
377 cd03299 ABC_ModC_like Archeal 100.0 7.9E-36 1.7E-40 320.9 19.9 195 182-386 1-205 (235)
378 PRK13634 cbiO cobalt transport 100.0 4.1E-36 8.8E-41 332.4 18.0 200 837-1065 3-223 (290)
379 PRK14256 phosphate ABC transpo 100.0 1.4E-35 3E-40 323.0 21.7 198 180-386 3-222 (252)
380 PRK14245 phosphate ABC transpo 100.0 1.2E-35 2.5E-40 323.2 21.1 197 181-386 3-220 (250)
381 cd03265 ABC_DrrA DrrA is the A 100.0 6.6E-36 1.4E-40 318.7 18.8 202 837-1065 1-209 (220)
382 PRK13651 cobalt transporter AT 100.0 4.3E-36 9.3E-41 332.9 18.0 200 837-1065 3-242 (305)
383 cd03257 ABC_NikE_OppD_transpor 100.0 8E-36 1.7E-40 320.5 19.5 200 837-1065 2-223 (228)
384 TIGR02324 CP_lyasePhnL phospho 100.0 1.1E-35 2.3E-40 318.2 20.4 196 182-385 2-223 (224)
385 PRK11144 modC molybdate transp 100.0 1.3E-35 2.8E-40 336.2 22.1 187 182-386 2-204 (352)
386 PRK11607 potG putrescine trans 100.0 3.8E-36 8.2E-41 341.1 17.6 204 835-1065 18-227 (377)
387 PRK14238 phosphate transporter 100.0 1.2E-35 2.7E-40 325.8 21.0 199 179-386 22-241 (271)
388 PRK13644 cbiO cobalt transport 100.0 7.4E-36 1.6E-40 327.8 19.3 203 837-1065 2-212 (274)
389 PRK10584 putative ABC transpor 100.0 9.7E-36 2.1E-40 319.4 19.8 203 836-1064 6-222 (228)
390 PRK14249 phosphate ABC transpo 100.0 1.8E-35 3.9E-40 321.9 22.1 198 181-387 4-222 (251)
391 PRK14240 phosphate transporter 100.0 1.5E-35 3.2E-40 322.6 21.4 197 181-386 3-220 (250)
392 PRK14241 phosphate transporter 100.0 1.4E-35 3.1E-40 323.9 21.2 197 181-386 4-222 (258)
393 TIGR03005 ectoine_ehuA ectoine 100.0 7.5E-36 1.6E-40 325.1 18.9 203 837-1065 1-224 (252)
394 cd03230 ABC_DR_subfamily_A Thi 100.0 1.8E-35 3.9E-40 302.3 20.5 160 182-386 1-170 (173)
395 PRK13635 cbiO cobalt transport 100.0 8.5E-36 1.8E-40 327.9 19.3 204 836-1065 5-217 (279)
396 PRK09536 btuD corrinoid ABC tr 100.0 7.4E-36 1.6E-40 339.5 19.4 207 836-1065 3-216 (402)
397 cd03246 ABCC_Protease_Secretio 100.0 6.3E-36 1.4E-40 305.6 16.9 165 837-1064 1-171 (173)
398 cd03291 ABCC_CFTR1 The CFTR su 100.0 6.9E-35 1.5E-39 318.8 26.0 193 178-387 36-234 (282)
399 TIGR00972 3a0107s01c2 phosphat 100.0 8.1E-36 1.8E-40 323.8 18.5 207 837-1065 2-220 (247)
400 PRK15093 antimicrobial peptide 100.0 1.7E-35 3.6E-40 332.7 21.7 198 181-386 3-234 (330)
401 TIGR02982 heterocyst_DevA ABC 100.0 6.6E-36 1.4E-40 318.5 17.4 203 837-1064 2-217 (220)
402 cd03247 ABCC_cytochrome_bd The 100.0 4.6E-36 1E-40 308.3 15.6 169 837-1065 1-173 (178)
403 cd03297 ABC_ModC_molybdenum_tr 100.0 1.3E-35 2.9E-40 314.9 19.6 189 183-386 3-207 (214)
404 TIGR03411 urea_trans_UrtD urea 100.0 1E-35 2.2E-40 322.4 19.0 210 837-1065 3-219 (242)
405 PRK14244 phosphate ABC transpo 100.0 1.6E-35 3.4E-40 322.4 20.6 196 182-386 6-223 (251)
406 PRK11701 phnK phosphonate C-P 100.0 2.1E-35 4.5E-40 322.6 21.6 197 181-386 6-227 (258)
407 PRK13652 cbiO cobalt transport 100.0 1.1E-35 2.3E-40 327.4 19.4 203 837-1065 4-215 (277)
408 PRK10744 pstB phosphate transp 100.0 1.3E-35 2.9E-40 324.2 19.9 210 834-1065 11-232 (260)
409 PRK14275 phosphate ABC transpo 100.0 1.9E-35 4.1E-40 326.4 21.0 199 179-386 37-256 (286)
410 TIGR02142 modC_ABC molybdenum 100.0 1.9E-35 4.1E-40 335.6 21.4 189 186-387 4-208 (354)
411 TIGR01189 ccmA heme ABC export 100.0 1.5E-35 3.2E-40 310.4 19.0 187 182-382 1-196 (198)
412 TIGR01277 thiQ thiamine ABC tr 100.0 1.2E-35 2.6E-40 314.8 18.6 200 837-1065 1-206 (213)
413 cd03228 ABCC_MRP_Like The MRP 100.0 1.9E-35 4.2E-40 301.4 19.3 160 182-386 1-169 (171)
414 PRK11264 putative amino-acid A 100.0 1.4E-35 2.9E-40 323.0 18.9 203 837-1065 4-221 (250)
415 PRK10619 histidine/lysine/argi 100.0 1.4E-35 3E-40 323.8 19.0 208 834-1066 3-230 (257)
416 PRK09473 oppD oligopeptide tra 100.0 2.5E-35 5.4E-40 330.1 21.5 199 180-386 11-237 (330)
417 PRK10247 putative ABC transpor 100.0 1.1E-35 2.3E-40 317.6 17.7 198 836-1062 7-211 (225)
418 COG0444 DppD ABC-type dipeptid 100.0 2.1E-35 4.6E-40 312.4 19.5 206 182-397 2-238 (316)
419 PRK14253 phosphate ABC transpo 100.0 2.7E-35 5.9E-40 320.3 21.0 197 181-386 3-219 (249)
420 PRK13649 cbiO cobalt transport 100.0 1.1E-35 2.3E-40 328.7 18.1 200 837-1065 3-222 (280)
421 cd03229 ABC_Class3 This class 100.0 3E-35 6.5E-40 302.1 20.0 162 182-386 1-176 (178)
422 PRK14273 phosphate ABC transpo 100.0 1.5E-35 3.2E-40 323.2 18.6 209 835-1065 6-226 (254)
423 cd03231 ABC_CcmA_heme_exporter 100.0 1.9E-35 4.2E-40 309.9 18.9 192 837-1061 1-198 (201)
424 PRK13537 nodulation ABC transp 100.0 1.5E-35 3.3E-40 329.5 19.1 204 835-1065 6-215 (306)
425 PRK11124 artP arginine transpo 100.0 1.3E-35 2.7E-40 321.4 18.0 203 837-1065 3-218 (242)
426 PRK14255 phosphate ABC transpo 100.0 2.9E-35 6.4E-40 320.6 20.9 198 180-386 4-222 (252)
427 PRK10419 nikE nickel transport 100.0 2.2E-35 4.8E-40 323.2 20.0 198 181-386 3-227 (268)
428 PRK14243 phosphate transporter 100.0 5.1E-35 1.1E-39 320.0 22.8 200 180-385 9-224 (264)
429 TIGR00968 3a0106s01 sulfate AB 100.0 2.1E-35 4.6E-40 318.0 19.5 202 837-1065 1-208 (237)
430 TIGR03608 L_ocin_972_ABC putat 100.0 1.2E-35 2.5E-40 313.8 17.1 196 839-1061 1-206 (206)
431 PRK09493 glnQ glutamine ABC tr 100.0 1.6E-35 3.4E-40 320.3 18.4 203 837-1065 2-213 (240)
432 PRK14236 phosphate transporter 100.0 4E-35 8.6E-40 322.3 21.8 199 179-386 23-242 (272)
433 PRK14262 phosphate ABC transpo 100.0 3.2E-35 6.9E-40 319.9 20.9 197 181-386 3-220 (250)
434 TIGR01186 proV glycine betaine 100.0 1.2E-35 2.6E-40 333.8 18.0 191 849-1065 5-207 (363)
435 PRK14271 phosphate ABC transpo 100.0 3.4E-35 7.5E-40 322.6 21.3 198 180-386 20-237 (276)
436 PRK14261 phosphate ABC transpo 100.0 3.8E-35 8.2E-40 319.8 21.3 198 180-386 5-223 (253)
437 cd03267 ABC_NatA_like Similar 100.0 1.6E-35 3.6E-40 318.4 18.2 185 194-386 33-229 (236)
438 PRK13645 cbiO cobalt transport 100.0 9.7E-36 2.1E-40 330.1 16.9 206 834-1065 4-228 (289)
439 PRK14265 phosphate ABC transpo 100.0 7.1E-35 1.5E-39 320.1 23.4 199 178-386 17-235 (274)
440 PRK14235 phosphate transporter 100.0 1.7E-35 3.7E-40 324.3 18.4 211 834-1065 17-239 (267)
441 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.4E-35 3E-40 325.0 17.7 201 838-1065 26-238 (269)
442 PRK13633 cobalt transporter AT 100.0 2E-35 4.4E-40 325.7 18.9 204 836-1065 4-221 (280)
443 TIGR01288 nodI ATP-binding ABC 100.0 2.6E-35 5.6E-40 328.5 19.8 203 836-1065 4-212 (303)
444 COG0411 LivG ABC-type branched 100.0 8.8E-36 1.9E-40 301.3 14.4 197 181-386 4-225 (250)
445 PRK10575 iron-hydroxamate tran 100.0 2.2E-35 4.9E-40 323.2 19.0 207 836-1065 11-225 (265)
446 PRK14242 phosphate transporter 100.0 1.8E-35 3.9E-40 322.5 18.1 208 836-1065 6-225 (253)
447 PRK14260 phosphate ABC transpo 100.0 4E-35 8.8E-40 320.3 20.8 198 180-386 6-224 (259)
448 cd03300 ABC_PotA_N PotA is an 100.0 1.9E-35 4.1E-40 317.5 17.9 202 837-1065 1-208 (232)
449 cd03230 ABC_DR_subfamily_A Thi 100.0 2.1E-35 4.6E-40 301.7 17.4 166 837-1065 1-172 (173)
450 cd03234 ABCG_White The White s 100.0 1.5E-35 3.3E-40 317.1 17.0 203 837-1065 4-221 (226)
451 TIGR03410 urea_trans_UrtE urea 100.0 1.1E-35 2.4E-40 319.4 16.1 199 837-1065 1-209 (230)
452 COG1245 Predicted ATPase, RNas 100.0 2.9E-34 6.4E-39 309.0 26.6 180 189-386 82-288 (591)
453 PRK13642 cbiO cobalt transport 100.0 1.6E-35 3.4E-40 326.1 17.4 201 836-1065 4-217 (277)
454 PRK11614 livF leucine/isoleuci 100.0 1.6E-35 3.4E-40 319.6 17.0 200 836-1065 5-214 (237)
455 PRK10895 lipopolysaccharide AB 100.0 2.1E-35 4.6E-40 319.5 18.0 203 837-1065 4-214 (241)
456 PRK13641 cbiO cobalt transport 100.0 2.4E-35 5.3E-40 326.0 18.8 204 836-1065 2-222 (287)
457 PRK11831 putative ABC transpor 100.0 2.7E-35 5.7E-40 323.1 18.9 204 836-1065 7-221 (269)
458 PRK14252 phosphate ABC transpo 100.0 9.1E-35 2E-39 318.6 23.1 199 179-386 14-235 (265)
459 PRK10771 thiQ thiamine transpo 100.0 4.9E-35 1.1E-39 314.6 20.5 200 837-1065 2-207 (232)
460 TIGR01184 ntrCD nitrate transp 100.0 2.7E-35 5.8E-40 315.5 18.3 181 198-386 1-190 (230)
461 TIGR02323 CP_lyasePhnK phospho 100.0 6.1E-35 1.3E-39 318.3 21.1 197 181-386 3-224 (253)
462 PRK11231 fecE iron-dicitrate t 100.0 3E-35 6.4E-40 320.8 18.6 206 837-1065 3-215 (255)
463 PRK11300 livG leucine/isoleuci 100.0 2.7E-35 5.9E-40 321.7 18.3 216 836-1065 5-231 (255)
464 PRK13639 cbiO cobalt transport 100.0 2.7E-35 5.9E-40 323.8 18.3 203 837-1065 2-214 (275)
465 PRK10418 nikD nickel transport 100.0 6.8E-35 1.5E-39 317.5 21.2 194 181-386 4-216 (254)
466 PRK14258 phosphate ABC transpo 100.0 6.2E-35 1.4E-39 318.9 20.9 198 180-386 6-226 (261)
467 PRK13638 cbiO cobalt transport 100.0 3E-35 6.6E-40 323.2 18.4 202 837-1065 2-213 (271)
468 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.2E-34 2.7E-39 316.8 22.9 195 834-1065 37-235 (282)
469 COG4598 HisP ABC-type histidin 100.0 5.8E-36 1.2E-40 283.7 10.7 197 181-386 6-227 (256)
470 PRK15079 oligopeptide ABC tran 100.0 3.3E-35 7.1E-40 328.9 18.8 206 836-1065 8-239 (331)
471 cd03229 ABC_Class3 This class 100.0 3E-35 6.5E-40 302.2 16.9 167 837-1064 1-177 (178)
472 PRK14246 phosphate ABC transpo 100.0 6.3E-35 1.4E-39 317.3 20.2 198 180-386 9-227 (257)
473 COG4161 ArtP ABC-type arginine 100.0 1.8E-35 3.9E-40 275.1 13.5 205 181-396 2-224 (242)
474 PRK14263 phosphate ABC transpo 100.0 1.2E-34 2.6E-39 316.0 22.3 199 181-385 8-222 (261)
475 TIGR02769 nickel_nikE nickel i 100.0 2.2E-35 4.8E-40 323.2 16.7 204 837-1065 3-228 (265)
476 COG4619 ABC-type uncharacteriz 100.0 7.8E-36 1.7E-40 280.1 11.1 191 848-1065 14-211 (223)
477 PRK13640 cbiO cobalt transport 100.0 2.7E-35 6E-40 324.7 17.4 205 835-1065 4-220 (282)
478 PRK13538 cytochrome c biogenes 100.0 4E-35 8.6E-40 308.5 17.7 195 837-1061 2-202 (204)
479 PRK13541 cytochrome c biogenes 100.0 7.8E-35 1.7E-39 304.0 19.8 186 182-382 2-193 (195)
480 PRK14259 phosphate ABC transpo 100.0 3.6E-35 7.7E-40 321.8 18.1 205 835-1063 12-228 (269)
481 PRK14247 phosphate ABC transpo 100.0 4.7E-35 1E-39 318.6 18.5 209 836-1065 3-222 (250)
482 PRK14268 phosphate ABC transpo 100.0 4.6E-35 1E-39 319.6 18.4 208 835-1065 11-230 (258)
483 PRK14272 phosphate ABC transpo 100.0 8.3E-35 1.8E-39 317.3 20.3 198 181-387 4-223 (252)
484 TIGR03873 F420-0_ABC_ATP propo 100.0 5.6E-35 1.2E-39 318.8 18.9 206 837-1065 2-214 (256)
485 PRK13548 hmuV hemin importer A 100.0 7E-35 1.5E-39 317.7 19.4 202 837-1065 3-218 (258)
486 cd03232 ABC_PDR_domain2 The pl 100.0 9.7E-35 2.1E-39 302.0 19.4 171 181-388 3-186 (192)
487 PRK14256 phosphate ABC transpo 100.0 7.9E-35 1.7E-39 317.0 19.5 210 834-1065 2-224 (252)
488 COG1118 CysA ABC-type sulfate/ 100.0 3.4E-35 7.5E-40 303.9 15.7 204 837-1065 3-215 (345)
489 PRK14237 phosphate transporter 100.0 3.6E-35 7.8E-40 321.7 16.9 209 835-1065 19-239 (267)
490 cd03215 ABC_Carb_Monos_II This 100.0 8.9E-35 1.9E-39 299.8 18.8 161 181-386 4-179 (182)
491 PRK13648 cbiO cobalt transport 100.0 4.6E-35 1E-39 321.4 17.6 204 836-1065 7-219 (269)
492 cd03213 ABCG_EPDR ABCG transpo 100.0 8.9E-35 1.9E-39 302.6 18.8 169 181-386 3-187 (194)
493 PRK14251 phosphate ABC transpo 100.0 5.5E-35 1.2E-39 318.3 17.8 208 836-1065 4-223 (251)
494 PRK14267 phosphate ABC transpo 100.0 5.4E-35 1.2E-39 318.7 17.8 209 836-1065 4-225 (253)
495 PRK13540 cytochrome c biogenes 100.0 5.7E-35 1.2E-39 306.3 17.1 191 837-1059 2-197 (200)
496 PRK14244 phosphate ABC transpo 100.0 5.3E-35 1.1E-39 318.2 17.4 208 837-1065 6-225 (251)
497 PRK10253 iron-enterobactin tra 100.0 7.5E-35 1.6E-39 319.0 18.7 208 835-1065 6-221 (265)
498 PRK14266 phosphate ABC transpo 100.0 1.8E-34 4E-39 313.9 21.4 201 181-386 3-220 (250)
499 COG4604 CeuD ABC-type enteroch 100.0 1.2E-35 2.6E-40 286.6 10.5 197 181-386 1-211 (252)
500 PRK10070 glycine betaine trans 100.0 7.3E-35 1.6E-39 331.1 18.8 202 837-1065 29-242 (400)
No 1
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.9e-128 Score=1162.88 Aligned_cols=967 Identities=19% Similarity=0.253 Sum_probs=643.8
Q ss_pred CcchhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 6 SPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGAT 85 (1075)
Q Consensus 6 ~~~~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (1075)
++.+.++..++++.-++.-....+...++.+|.+|+||+.|.+++.+.+ ....+..+++..+.++...+...+
T Consensus 192 a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L---~~~~k~gi~~g~~~G~~~G~~~~~---- 264 (1228)
T KOG0055|consen 192 ARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKAL---ENALKFGIKKGLFKGLGLGFTFFL---- 264 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhHHHHHH----
Confidence 4456677777777777777777788888888999999999986444433 333343444444444433322211
Q ss_pred HHHHHHHhhhhccccccCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccC
Q 001446 86 VAVILIIEPFFAGNLKPDT-STLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIED 164 (1075)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~ 164 (1075)
+-..+.+..|+++.+.... .+.|. ++. .+.+++... .++++..+.+..+...+.++.++++.++..+.++...
T Consensus 265 ~~~~~a~~~WyG~~li~~~~~~~g~--v~~---v~~~vl~g~-~sLgqa~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~ 338 (1228)
T KOG0055|consen 265 LFASYALAFWYGSTLILNGGYNGGD--VIT---VFFSVLIGG-MSLGQASPHLSAFAKARAAAYRIFETIDRKPSIDPYS 338 (1228)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCce--EEE---EEeehhhhh-hhhhccccchHHHhccccchHHHHHHhcCCCCCCccc
Confidence 1122334567876654332 12221 111 112222333 3678888888999999999999999988776654322
Q ss_pred CCCCCCCCCCCCCCCccEEEEeEEEEcCCC--CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeC
Q 001446 165 KSPQRNGSRNYFSEANYIEFSGVKVVTPTG--NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKP 242 (1075)
Q Consensus 165 ~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~--~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~ 242 (1075)
.. ........+.++|+||+|+||.. .++|+|+||+|++|+.++|+|||||||||++++|.|+|+|++|+|.+|
T Consensus 339 ~~-----~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G~V~id 413 (1228)
T KOG0055|consen 339 KG-----GRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSGEVLID 413 (1228)
T ss_pred cc-----CCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCceEEEc
Confidence 10 00111235689999999999964 379999999999999999999999999999999999999999999999
Q ss_pred CcC------ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCC
Q 001446 243 GVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWG 313 (1075)
Q Consensus 243 ~~~------~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g 313 (1075)
|.+ +.+|++||.|.|+|.+|.+||+|||.|+.+ ..+.+++.++++..+.++++..+|.+.++ +.|
T Consensus 414 G~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~------dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g 487 (1228)
T KOG0055|consen 414 GEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKP------DATREEIEEAAKAANAHDFILKLPDGYDTLVGERG 487 (1228)
T ss_pred CccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCC------cccHHHHHHHHHHccHHHHHHhhHHhhcccccCCC
Confidence 976 457889999999999999999999999964 35678899999999999999999987655 567
Q ss_pred CCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcCCCcEE
Q 001446 314 DELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGEGEWR 391 (1075)
Q Consensus 314 ~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~~ 391 (1075)
.+|||||||||||||||+++|+||||||||||||+++++.+.+.|.+ .|+|.|+|+||++.++.+|+|+++++ |.+
T Consensus 488 ~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~--G~I 565 (1228)
T KOG0055|consen 488 VQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRNADKIAVMEE--GKI 565 (1228)
T ss_pred CCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEEC--CEE
Confidence 89999999999999999999999999999999999999999999975 59999999999999999999999986 457
Q ss_pred EecCCCCcccccccccccc-ccccccc----chhhhhHHHhhhhcccccccCCcc-hhhhHHHHhhcCCCCCCCCCCCCc
Q 001446 392 VHDKRDGSSVVTKSGINMI-KSSETDR----QSDAMAVEQAFVTAKKDSAFSNPK-AQSYVSEVIAASPIADHNVPLPVF 465 (1075)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 465 (1075)
++.+.|++++...+.+... ..++.+. ..+..........+...+...... .......... . ..++. ....
T Consensus 566 vE~G~h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~~-~-~~~~e--~~~~ 641 (1228)
T KOG0055|consen 566 VEQGTHDELIALGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGSNRSNLLS-V-KPEGE--DPEE 641 (1228)
T ss_pred EEecCHHHHHhccchHHHHHHHHhhhhhhhccccccchhhhhhhccccccccccccCCcccccccc-c-ccccc--cccc
Confidence 8888887776543211100 0000000 000000000000000000000000 0000000000 0 00000 0000
Q ss_pred ccccCCCCcchhhHHhHHHhhhcccchhhhHHHHHHH----HHHHHHHHHHHHhhhhcchHHHHHHhcCHHHHHHHHHHH
Q 001446 466 PQLKSAPRILPLRVADMFKVLVPTVFDKQGAQLLAVA----FLVVSRTWISDRIASLNGTTVKYVLEQDKASFVRLIGVS 541 (1075)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (1075)
+..........++++.+.+..++++ ..+.+.+++ ..+++. .++..+..+.....+..........+.+++++
T Consensus 642 ~~~~~~~~~s~~~i~k~~~pe~~~l---~lG~i~a~i~G~~~P~fa~-~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~ 717 (1228)
T KOG0055|consen 642 PVSEEDEKVSFWRIFKLNKPEWPYL---LLGSLGAAIRGATYPLFAY-VFSQVLEAFYPPDDDELKREVRAWALIFLGLG 717 (1228)
T ss_pred ccccccccccHHHHHHhccchhHHH---HHHHHHHHHhhhhHHHHHH-HHHHHHHHHhCCChHHHHHHHHHHHHHHHHHH
Confidence 0000001111233333332222221 111111111 111111 11111111110000000000001111234445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHH----H--
Q 001446 542 VLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSG----L-- 615 (1075)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~----~-- 615 (1075)
++..+...+..+.+....+++..+.|..+++++++. +..|||..+++ +.+.+|+++|...+...+.. +
T Consensus 718 ~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~q---d~~wFD~~~ns---g~l~~RLa~Da~~vr~~v~~rl~~vv~ 791 (1228)
T KOG0055|consen 718 IVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQ---EVGWFDDPENS---GALSSRLATDASNVRAAVGDRLSLVVQ 791 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CCcccCCCccc---hHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 555555666677888888899889998888888763 56899876654 67889999998886544332 2
Q ss_pred -hhhhhHhHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHH-HHHHhccccccccHHHHh-hchhhhhHHHHHHHhhHHhh
Q 001446 616 -VTGMVKPSVDILWFTWRMKALTGQRGVAILYAYMLLGLG-FLRSVTPEFGDLTSREQQ-LEGTFRFMHERLRAHAESVA 692 (1075)
Q Consensus 616 -~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~~~~~i~ 692 (1075)
+..++.+++..++++|+|++++.+ .++++.+..+ ..+.. .....+... .+...+ ...+..+|.+||+
T Consensus 792 ~~~~~~~~iiiaf~~~W~lalv~la-----~~Pll~~~~~~~~~~~----~~~~~~~~~~~~ea~~-iA~eai~NIrTV~ 861 (1228)
T KOG0055|consen 792 NIAAVIIGIIIAFIYGWRLALVVLA-----TFPLLILSGYLQKKFL----KGFSKDDKKAYEEASK-IAIEAVSNIRTVA 861 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHH----hhhhHHHHHHHHHHHH-HHHHHHHhHHHHH
Confidence 233344555568899999987521 1111111111 11211 111222222 222223 3344556888999
Q ss_pred hcCCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHH
Q 001446 693 FFGGGAREKAMIESRFRELLE-HSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRF 771 (1075)
Q Consensus 693 ~~~~~~~e~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~ 771 (1075)
+|+.|+ + +.+.|.+.++ ..+...++.++.++.. ..++......++++++|+..+...... +...+ . -
T Consensus 862 al~~e~---~-~~~~y~~~l~~p~~~~~~~~~i~gl~f--~~sqs~~~~~~A~~f~~G~~Li~~g~~--~~~~~--~--~ 929 (1228)
T KOG0055|consen 862 ALCAEE---K-FMELYKEELEKPRKSSFKRGLISGLGF--GFSQSLLFFVYALSFWYGARLISNGEM--TFEDV--F--R 929 (1228)
T ss_pred HHhhHH---H-HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhHHHHhcCCc--CHHHH--H--H
Confidence 987533 3 3445555554 3445556666666543 333444566677888887654322110 01111 1 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCCcc-
Q 001446 772 LASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQK- 850 (1075)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~~- 850 (1075)
+...+....+.+++...+.|++.....|+.+|+++.+.++..+... ..+ ..+| ..+|+|+|+||+|+||++|
T Consensus 930 vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~--~~~---~~~~--~~~G~I~~~~V~F~YPsRP~ 1002 (1228)
T KOG0055|consen 930 VFMALSFTAMALGQASSYAPDISKAKIAAGSIFEILDRKPTIDPDS--TSG---GKLP--NVKGDIEFRNVSFAYPTRPD 1002 (1228)
T ss_pred HHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhcCCCCCCCCC--CCC---Cccc--cceeEEEEeeeEeeCCCCCC
Confidence 1223334556778888899999999999999999998776444321 111 0122 3589999999999999854
Q ss_pred -ccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhh
Q 001446 851 -LLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRD 927 (1075)
Q Consensus 851 -~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~ 927 (1075)
+||+|+||+|++||+||+||||||||||++.+|+|||||.+|.|.|||+||+++ +++|++|++|+|||.||++||||
T Consensus 1003 ~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrE 1082 (1228)
T KOG0055|consen 1003 VPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRE 1082 (1228)
T ss_pred chhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHH
Confidence 799999999999999999999999999999999999999999999999999998 67999999999999999999999
Q ss_pred hhcCCC-C-hHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHH
Q 001446 928 QIIYPL-S-REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMA 1004 (1075)
Q Consensus 928 NL~~p~-~-~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiA 1004 (1075)
||.|+. . +++++++|+++|+.| .++.++|+||||.+ +.|.+||||||||||||
T Consensus 1083 NI~YG~~~vs~~eIi~Aak~ANaH------------------------~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIA 1138 (1228)
T KOG0055|consen 1083 NIAYGSEEVSEEEIIEAAKLANAH------------------------NFISSLPQGYDTRVGERGVQLSGGQKQRIAIA 1138 (1228)
T ss_pred HHhccCCCCCHHHHHHHHHHhhhH------------------------HHHhcCcCcccCccCcccCcCCchHHHHHHHH
Confidence 999983 2 345555676666544 45566788999986 68999999999999999
Q ss_pred HHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1005 RLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1005 RAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
||++||||||||||||||||.++|+.+|+.+.. .|+|+|+|||||+||+-.|.+.++.+|.
T Consensus 1139 RAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~Vi~~G~ 1201 (1228)
T KOG0055|consen 1139 RAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAVLKNGK 1201 (1228)
T ss_pred HHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEEEECCE
Confidence 999999999999999999999999999999865 5999999999999999999999998885
No 2
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-125 Score=1167.33 Aligned_cols=950 Identities=19% Similarity=0.246 Sum_probs=626.4
Q ss_pred hhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 9 FGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAV 88 (1075)
Q Consensus 9 ~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (1075)
..++..++.+..++.-...+.+..+++.||+|++|+.+.+++.+..+...+..++. .....+..++..... .+..
T Consensus 365 ~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~----~~~~~~~~~~~~~~p-~lv~ 439 (1381)
T KOG0054|consen 365 IAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKS----AYLSALNSFLNFFSP-VLVS 439 (1381)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH-HHHH
Confidence 34444445555566667889999999999999999999988777665554444332 222222222211111 1111
Q ss_pred HHHHhhh--hccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCC
Q 001446 89 ILIIEPF--FAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKS 166 (1075)
Q Consensus 89 ~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~ 166 (1075)
++.+..| +.++.......+....+|..++ ..+..+...+..+.+.....+|+.+|+..++.... ...
T Consensus 440 ~~tF~~~v~~~~~~lt~~~aF~slalfniLr----------~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~-~~~ 508 (1381)
T KOG0054|consen 440 VVTFVVFVLLLGNLLTASTAFTSLALFNILR----------FPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPD-SVE 508 (1381)
T ss_pred HHHHHHHhhccCccccHhHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCcc-ccc
Confidence 1111111 1121111111222222333322 23333445556667777888888888765432211 110
Q ss_pred CCCCCCCCCCCCCccEEEEeEEEEcCC--CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCc
Q 001446 167 PQRNGSRNYFSEANYIEFSGVKVVTPT--GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGV 244 (1075)
Q Consensus 167 ~~~~~~~~~~~~~~~i~~~~v~~~~~~--~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~ 244 (1075)
. .........++++|.++.+.. ..+.|+|+||+|++|+.++|+||.||||||||.+|+|+++..+|+|.++|
T Consensus 509 ~-----~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~g- 582 (1381)
T KOG0054|consen 509 R-----SPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNG- 582 (1381)
T ss_pred c-----CCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcC-
Confidence 0 011123456999999999854 34599999999999999999999999999999999999999999999988
Q ss_pred CccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCChhHH
Q 001446 245 GSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQ 321 (1075)
Q Consensus 245 ~~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqk 321 (1075)
.++||||.||++++||||||+||.++ ++++++++++.|.|.++++.+|.++.+ ++|.+||||||
T Consensus 583 ------siaYv~Q~pWI~ngTvreNILFG~~~-------d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQK 649 (1381)
T KOG0054|consen 583 ------SVAYVPQQPWIQNGTVRENILFGSPY-------DEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQK 649 (1381)
T ss_pred ------eEEEeccccHhhCCcHHHhhhcCccc-------cHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHH
Confidence 69999999999999999999999654 567899999999999999999998876 57889999999
Q ss_pred HHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHhhCCeEEEEcCCCcEEEecCCCC
Q 001446 322 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVLSLDGEGEWRVHDKRDG 398 (1075)
Q Consensus 322 qRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~~~~~~~~~ 398 (1075)
|||+||||+|+++||+|||+|+||+|.++.+++++.+.. .++|+|+|||.+++++.+|.|++|++ |.+.+.+..+
T Consensus 650 qRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~--G~I~~~Gty~ 727 (1381)
T KOG0054|consen 650 QRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKD--GKIVESGTYE 727 (1381)
T ss_pred HHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecC--CeEecccCHH
Confidence 999999999999999999999999999999999998754 48999999999999999999999987 3344444433
Q ss_pred cccccccccccccccccccchhhhhHHHhhhhcccccccCCcchhhhHHHHhhcCCC-CCCCC-CCCCcccccCCCCcch
Q 001446 399 SSVVTKSGINMIKSSETDRQSDAMAVEQAFVTAKKDSAFSNPKAQSYVSEVIAASPI-ADHNV-PLPVFPQLKSAPRILP 476 (1075)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~ 476 (1075)
++.......... ..+.+.........+ .......................+. .+... .........++.+.+.
T Consensus 728 el~~~~~~~~~l-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~G~v~ 802 (1381)
T KOG0054|consen 728 ELLKSGGDFAEL-AHEEESEQEEEASEK----DLESGESSRESESRSLESLSSEEEKSKDEKEEEDKLVQEEERETGKVS 802 (1381)
T ss_pred HHHhcchhHHHH-hhccchhhccccccc----cccccccccchhhhhhhhhcccccccccccchhhHHHHHHHHhcCEee
Confidence 332100000000 000000000000000 0000000000000000000000000 00000 0000000001122222
Q ss_pred hhHHhHHHhhhcccchhh------hHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Q 001446 477 LRVADMFKVLVPTVFDKQ------GAQLLAVAFLVVSRTWISDRIASLNGTTVKYVLEQDKASFVRLIGVSVLQSAASSF 550 (1075)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (1075)
+ ..|+.|+....... ...+...++.+..++|++.|.......... ..+. ..++++|.+.+++..+
T Consensus 803 ~---~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~---~~~~---~~~~~vY~~l~~~~~~ 873 (1381)
T KOG0054|consen 803 W---SVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTT---TVST---SFYLGVYALLGVASSL 873 (1381)
T ss_pred H---HHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc---CCCc---chHHHHHHHHHHHHHH
Confidence 2 33444443311100 111122233446778998887653211100 0011 1234444444444444
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhccCC-ceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHHHHHHH
Q 001446 551 IAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDILWF 629 (1075)
Q Consensus 551 ~~~~~~~~~~~~~~~~r~~l~~~ll~~~l~~~-~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~~~~~~ 629 (1075)
+...-.........+....||++++++.++++ .||+. ...|.+.|||++|++.+|..++..+..++.+++.++..
T Consensus 874 ~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdt----TP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~ 949 (1381)
T KOG0054|consen 874 LTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDT----TPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGI 949 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCC----CCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 33333333444456667899999999999875 67773 34578999999999999999999998888887776555
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccH-HHHhhchhhh-----hHHHHHHHhhHHhhhcCCcHHHHHH
Q 001446 630 TWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTS-REQQLEGTFR-----FMHERLRAHAESVAFFGGGAREKAM 703 (1075)
Q Consensus 630 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r-----~~~~~~~~~~~~i~~~~~~~~e~~~ 703 (1075)
...++.+.++. .++.+++.+..++++. ++..++ +.+++++..| ++.|.+ .+..+|++|+.+++
T Consensus 950 ~~vi~~~~P~f--li~~~pl~v~~~~~~~----~Y~~tsReLkRLesitRSPi~sh~~Etl-~GlsTIRAf~~~~r---- 1018 (1381)
T KOG0054|consen 950 LVVISYVTPWF--LIAIIPLGVIYYFVQR----YYLATSRELKRLESITRSPIYSHFSETL-QGLSTIRAFGKEER---- 1018 (1381)
T ss_pred HHHhhHHhHHH--HHHHHHHHHHHHHHHH----HHHHHhHHHHHhhhcccchHHHhHHHHh-cCcceeeeccccHH----
Confidence 44444333221 1111111122222222 233333 4467776655 222332 23567899987554
Q ss_pred HHHHHHHHHHHHH-----HHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHH
Q 001446 704 IESRFRELLEHSL-----LLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQ 778 (1075)
Q Consensus 704 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~ 778 (1075)
|.+.+....+... .....+|+. +..+++...+ .+..++...+. .... ...|..+.++.|. .+
T Consensus 1019 f~~~~~~~~D~~~~~~f~~~~a~RWla-~Rle~ig~~~----v~~~al~~vl~-~~~~---~~~g~vGLslsya----l~ 1085 (1381)
T KOG0054|consen 1019 FIQENDELIDENSRAFFLSISANRWLA-VRLELLGNLV----VLIAALFAVLL-PSGL---ISPGLVGLSLSYA----LQ 1085 (1381)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHH-HHHHHHHHHH----HHHHHHHHHHc-cCCC---CCcchHHHHHHHH----HH
Confidence 4555555555432 334566654 4334433221 11112221111 1110 1245555555543 33
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeC-CCccccccccc
Q 001446 779 SFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIIT-PSQKLLARQLT 857 (1075)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~y-p~~~~vL~~vs 857 (1075)
+...+++.+....+++....|+|||.+|.+.+++ ++ .......||++||. +|+|+|+|++++| |+.++||||||
T Consensus 1086 lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E-~p-~~~~~~~pp~~WP~---~G~I~f~~~~~RYrp~lp~VLk~is 1160 (1381)
T KOG0054|consen 1086 LTGLLQWLVRQSSELENNMVSVERVLEYTDIPSE-AP-LEIEESRPPPSWPS---KGEIEFEDLSLRYRPNLPLVLKGIS 1160 (1381)
T ss_pred HHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCC-CC-CCCcCCCCCCCCCC---CCeEEEEEeEEEeCCCCcchhcCce
Confidence 4445666677777777778999999999987766 22 11122237889998 8999999999966 66799999999
Q ss_pred eeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhhhhcCCCCh
Q 001446 858 FEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSR 935 (1075)
Q Consensus 858 ~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~ 935 (1075)
|+|+||||||||||||||||||+++|+|+.||.+|+|.|||+||+++ ..+|+++++|||||+||+||+|.||| |+..
T Consensus 1161 ~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLD-Pf~e 1239 (1381)
T KOG0054|consen 1161 FTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLD-PFDE 1239 (1381)
T ss_pred EEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccC-cccc
Confidence 99999999999999999999999999999999999999999999998 67899999999999999999999998 7642
Q ss_pred HHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEe
Q 001446 936 EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFG 1014 (1075)
Q Consensus 936 ~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~IL 1014 (1075)
.+|++||++|+.++|++.++++|+|||+.+ ++|+|||.||||++|+||||||++|||
T Consensus 1240 ----------------------~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skIL 1297 (1381)
T KOG0054|consen 1240 ----------------------YSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKIL 1297 (1381)
T ss_pred ----------------------cCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEE
Confidence 568899999999999999999999999986 789999999999999999999999999
Q ss_pred EeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1015 ILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1015 iLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
+||||||++|.+|+..||+++++ ++||||+||||++|+-..|++++|++|.
T Consensus 1298 vLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~ 1350 (1381)
T KOG0054|consen 1298 VLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGR 1350 (1381)
T ss_pred EEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCe
Confidence 99999999999999999999975 7999999999999999999999998875
No 3
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.4e-112 Score=1114.93 Aligned_cols=951 Identities=17% Similarity=0.190 Sum_probs=579.7
Q ss_pred chhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 8 AFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVA 87 (1075)
Q Consensus 8 ~~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (1075)
.+.++..+..+..+++-..+..+..++++||+|++|+.+.+++.+..+...+..++ ......+..++.......++
T Consensus 463 ~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~----~~~~~~~~~~~~~~~~~~v~ 538 (1622)
T PLN03130 463 KMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRK----AQLLSAFNSFILNSIPVLVT 538 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
Confidence 34444444555556666677888899999999999999888777665544333222 11122222211111111111
Q ss_pred HHHHHhh--hhccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCC
Q 001446 88 VILIIEP--FFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDK 165 (1075)
Q Consensus 88 ~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~ 165 (1075)
++.+.. ++++.+ +.|. +++.+ ..+..+...+..+...+..+.+....++|+.++++.++.......
T Consensus 539 -~~~fg~~~~~~g~L-----t~g~--vf~~l----~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~~ 606 (1622)
T PLN03130 539 -VVSFGVFTLLGGDL-----TPAR--AFTSL----SLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLPNP 606 (1622)
T ss_pred -HHHHHHHHHhCCCC-----CHHH--HHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccCC
Confidence 111111 122222 3332 23222 222233344555666677888889999999998754332111000
Q ss_pred CCCCCCCCCCCCCCccEEEEeEEEEcCC--CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCc-cEEEeC
Q 001446 166 SPQRNGSRNYFSEANYIEFSGVKVVTPT--GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVS-GHIAKP 242 (1075)
Q Consensus 166 ~~~~~~~~~~~~~~~~i~~~~v~~~~~~--~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~-G~i~~~ 242 (1075)
. .....+.++++|++|.|++ ++++|+|+||+|++|++++|+||+|||||||+++|+|+++|++ |+|.+.
T Consensus 607 ------~--~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~ 678 (1622)
T PLN03130 607 ------P--LEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIR 678 (1622)
T ss_pred ------c--ccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEc
Confidence 0 0011246999999999974 3679999999999999999999999999999999999999999 999875
Q ss_pred CcCccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCChh
Q 001446 243 GVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLG 319 (1075)
Q Consensus 243 ~~~~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgG 319 (1075)
+ +|+||+|+||+|++||||||.|+.+ .+++++.++++.|+|+++++.+|.|+++ +.|.+||||
T Consensus 679 ~-------~Iayv~Q~p~LfngTIreNI~fg~~-------~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGG 744 (1622)
T PLN03130 679 G-------TVAYVPQVSWIFNATVRDNILFGSP-------FDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGG 744 (1622)
T ss_pred C-------eEEEEcCccccCCCCHHHHHhCCCc-------ccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHH
Confidence 4 7999999999999999999999854 2467899999999999999999988765 567899999
Q ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHH-Hh--cCCeEEEEecChhhHhhCCeEEEEcCCCcEEEecCC
Q 001446 320 EQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKV-RA--MGTSCITISHRPALVAFHDVVLSLDGEGEWRVHDKR 396 (1075)
Q Consensus 320 qkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l-~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~~~~~~~ 396 (1075)
|||||+||||+|++|+|+||||||||||+++++++++.+ +. .++|+|+|||+++.+..+|+|++|++ | ...+.+.
T Consensus 745 QKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~-G-~i~e~Gt 822 (1622)
T PLN03130 745 QKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHE-G-MIKEEGT 822 (1622)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeC-C-EEEEeCC
Confidence 999999999999999999999999999999999987654 32 48999999999999999999999985 3 3444444
Q ss_pred CCccccccccccc-ccccc-cccchhhhhHHHhhhhcccccccCCcchhhhHHHHhhcCCCCCCCCCCCCcccccCCCCc
Q 001446 397 DGSSVVTKSGINM-IKSSE-TDRQSDAMAVEQAFVTAKKDSAFSNPKAQSYVSEVIAASPIADHNVPLPVFPQLKSAPRI 474 (1075)
Q Consensus 397 ~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (1075)
+++.+........ ..... .+........... ................... ................+..+..+.
T Consensus 823 ~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~e~~~~g~ 898 (1622)
T PLN03130 823 YEELSNNGPLFQKLMENAGKMEEYVEENGEEED--DQTSSKPVANGNANNLKKD--SSSKKKSKEGKSVLIKQEERETGV 898 (1622)
T ss_pred HHHHHhcchhHHHHHHhcccccccccccccccc--ccccccccccccccccccc--ccccccccccchhhhhHHHHhcCc
Confidence 3333211100000 00000 0000000000000 0000000000000000000 000000000000000000011111
Q ss_pred chhhHHhHHHhhhcccch--hhhH----HHHHHHHHHHHHHHHHHHhhhhcchHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 001446 475 LPLRVADMFKVLVPTVFD--KQGA----QLLAVAFLVVSRTWISDRIASLNGTTVKYVLEQDKASFVRLIGVSVLQSAAS 548 (1075)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (1075)
+.+ ..|+.|+..... .... .++..++..+..+|++.|....... .+...+ +++++++.+++.
T Consensus 899 v~~---~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~-------~~~~~~--~~~i~~~l~~~~ 966 (1622)
T PLN03130 899 VSW---KVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPK-------THGPLF--YNLIYALLSFGQ 966 (1622)
T ss_pred cCH---HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC-------CCchhH--HHHHHHHHHHHH
Confidence 122 223333222110 0000 0111122234556777776432110 000111 222222222222
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccCC-ceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHHHHH
Q 001446 549 SFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDIL 627 (1075)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~r~~l~~~ll~~~l~~~-~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~~~~ 627 (1075)
.+..++..++......+....++.+++++.++.+ .||+ ....+++.+|+++|++.++..++..+..++..++.++
T Consensus 967 ~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd----~~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i 1042 (1622)
T PLN03130 967 VLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFH----TNPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLL 1042 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhc----cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222223333344445556666666666543 6776 3456789999999999999988776666555544433
Q ss_pred HHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhc----hhhhhHHHHHHHhhHHhhhcCCcHHHHHH
Q 001446 628 WFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLE----GTFRFMHERLRAHAESVAFFGGGAREKAM 703 (1075)
Q Consensus 628 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~r~~~~~~~~~~~~i~~~~~~~~e~~~ 703 (1075)
.....++.+... ..++++++++...++..+. .....+.++.+ +.......+...+..+|++|+.++ .
T Consensus 1043 ~~~i~i~~~~~~--~~~~~~pl~~~~~~~~~~~---~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~----~ 1113 (1622)
T PLN03130 1043 STFVLIGIVSTI--SLWAIMPLLVLFYGAYLYY---QSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYD----R 1113 (1622)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHH----H
Confidence 222222211110 0111111111111111110 01111112221 111122233445678899998644 3
Q ss_pred HHHHHHHHHHHHHHH-----HHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccch-hhhhhhHHHHHHHHHHHHHH
Q 001446 704 IESRFRELLEHSLLL-----LKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRA-LVSTQGELAHALRFLASVVS 777 (1075)
Q Consensus 704 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~l~~~~~~~~ 777 (1075)
+.+.+.+..+..++. ...+|+.... .++.. .+.+..+. +++...+... .....+.++..+. ++.
T Consensus 1114 f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l-~~~~~----~~i~~~~~-~~v~~~~~~~~~~~~~~~~G~~ls----~~~ 1183 (1622)
T PLN03130 1114 MAEINGRSMDNNIRFTLVNMSSNRWLAIRL-ETLGG----LMIWLTAS-FAVMQNGRAENQAAFASTMGLLLS----YAL 1183 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH----HHHHHHHH-HHHHcccccccchhhhHHHHHHHH----HHH
Confidence 444555555443321 2333432222 12111 11111111 1111100000 0000122222222 223
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCC-cccccccc
Q 001446 778 QSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQL 856 (1075)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~-~~~vL~~v 856 (1075)
.....+..+......++....+++|+.++.+.+++.+... ....+++.||. +|.|+|+||+|+|++ .++||+|+
T Consensus 1184 ~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~--~~~~~~~~wp~---~g~I~f~nVsf~Y~~~~~~VL~~i 1258 (1622)
T PLN03130 1184 NITSLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLVI--ENNRPPPGWPS---SGSIKFEDVVLRYRPELPPVLHGL 1258 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccc--cCCCCCCCCCC---CCcEEEEEEEEEeCCCCCceecce
Confidence 3344555666666667778899999999986554332111 11223456886 689999999998864 56899999
Q ss_pred ceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhhhhcCCCC
Q 001446 857 TFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLS 934 (1075)
Q Consensus 857 s~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~ 934 (1075)
||+|+||||||||||||||||||+++|+|||+|++|+|.|||+||+++ +.+|++|++|||||+||+||||+||++...
T Consensus 1259 s~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~~ 1338 (1622)
T PLN03130 1259 SFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFNE 1338 (1622)
T ss_pred eEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCCC
Confidence 999999999999999999999999999999999999999999999988 568899999999999999999999995321
Q ss_pred hHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCE
Q 001446 935 REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKF 1013 (1075)
Q Consensus 935 ~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~I 1013 (1075)
.+|++++++++.++++++++++|+||||.+ +.|.+|||||||||||||||||+|+|
T Consensus 1339 -----------------------~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~I 1395 (1622)
T PLN03130 1339 -----------------------HNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKI 1395 (1622)
T ss_pred -----------------------CCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCE
Confidence 246778888899999999999999999987 57899999999999999999999999
Q ss_pred eEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1014 GILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1014 LiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
||||||||+||.++|+.|++.+++ ++||+|+||||++++..+|++++|++|.
T Consensus 1396 LILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~ 1449 (1622)
T PLN03130 1396 LVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILVLDAGR 1449 (1622)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCCEEEEEECCE
Confidence 999999999999999999998865 5999999999999999999999998775
No 4
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.3e-111 Score=1107.74 Aligned_cols=950 Identities=17% Similarity=0.189 Sum_probs=579.5
Q ss_pred chhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 8 AFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVA 87 (1075)
Q Consensus 8 ~~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (1075)
...+...+..+..+++-..+..+.++++.||+|++|+.+.+++.+..++..+..++.. .......++......++
T Consensus 463 ~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~----~~~~~~~~~~~~~~~~~- 537 (1495)
T PLN03232 463 KMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQ----LLSAFNSFILNSIPVVV- 537 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH-
Confidence 3344444445555566567778888999999999999998877776655444433221 11111111111111111
Q ss_pred HHHHHhhhhcccccc-CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCC
Q 001446 88 VILIIEPFFAGNLKP-DTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKS 166 (1075)
Q Consensus 88 ~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~ 166 (1075)
.++ +|++.+.. +..+.|. +++.+ ..+..+...+..+......+.+...+++|+.++++.+++......
T Consensus 538 ~~~----~fg~~~v~~~~lt~g~--vf~~l----~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~~- 606 (1495)
T PLN03232 538 TLV----SFGVFVLLGGDLTPAR--AFTSL----SLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQNP- 606 (1495)
T ss_pred HHH----HHHHHHHhCCCCCHHH--HHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccC-
Confidence 111 11111111 1123332 23221 223333344556666777888899999999998865432211000
Q ss_pred CCCCCCCCCCCCCccEEEEeEEEEcCC--CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCc
Q 001446 167 PQRNGSRNYFSEANYIEFSGVKVVTPT--GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGV 244 (1075)
Q Consensus 167 ~~~~~~~~~~~~~~~i~~~~v~~~~~~--~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~ 244 (1075)
. .....+.++++|++|.|++ ++++|+|+||+|++||+++|+||+|||||||+++|+|+++|++|.+..
T Consensus 607 -----~--~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~~--- 676 (1495)
T PLN03232 607 -----P--LQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSVV--- 676 (1495)
T ss_pred -----C--cCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEEE---
Confidence 0 0011246999999999974 367999999999999999999999999999999999999999987642
Q ss_pred CccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCChhHH
Q 001446 245 GSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQ 321 (1075)
Q Consensus 245 ~~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqk 321 (1075)
++++|+||+|+||+|++||||||.|+.+ .+++++.++++.|++.++++.+|.++++ +.|.+||||||
T Consensus 677 ---~~~~Iayv~Q~p~Lf~gTIreNI~fg~~-------~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQk 746 (1495)
T PLN03232 677 ---IRGSVAYVPQVSWIFNATVRENILFGSD-------FESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQK 746 (1495)
T ss_pred ---ecCcEEEEcCccccccccHHHHhhcCCc-------cCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHH
Confidence 3568999999999999999999999853 3567899999999999999999988765 56789999999
Q ss_pred HHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHH-Hh--cCCeEEEEecChhhHhhCCeEEEEcCCCcEEEecCCCC
Q 001446 322 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKV-RA--MGTSCITISHRPALVAFHDVVLSLDGEGEWRVHDKRDG 398 (1075)
Q Consensus 322 qRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l-~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~~~~~~~~~ 398 (1075)
|||+||||+|++|+|+||||||||||+++++++++.+ .. .++|+|+|||+++.++.+|+|++|+++ ...+.+.+.
T Consensus 747 QRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G--~i~~~Gt~~ 824 (1495)
T PLN03232 747 QRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEG--MIKEEGTFA 824 (1495)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCC--EEEEecCHH
Confidence 9999999999999999999999999999999998764 32 589999999999999999999999863 344444433
Q ss_pred ccccccccccc-ccccc-cccchhhhhHHHhhhhcccccccCCcchhhhHHHHhhcCCCCCCCCCCCCcccccCCCCcch
Q 001446 399 SSVVTKSGINM-IKSSE-TDRQSDAMAVEQAFVTAKKDSAFSNPKAQSYVSEVIAASPIADHNVPLPVFPQLKSAPRILP 476 (1075)
Q Consensus 399 ~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (1075)
+.+........ ..... .+.........+.. ............. ... ...............+..++.+...
T Consensus 825 eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~e~~~~g~v~ 897 (1495)
T PLN03232 825 ELSKSGSLFKKLMENAGKMDATQEVNTNDENI---LKLGPTVTIDVSE--RNL--GSTKQGKRGRSVLVKQEERETGIIS 897 (1495)
T ss_pred HHHhcchhHHHHHHhccccccccccccccccc---ccccccccccccc--ccc--ccccccccchhhhhhHHHHhcCccc
Confidence 33211100000 00000 00000000000000 0000000000000 000 0000000000000000000111111
Q ss_pred hhHHhHHHhhhcccch--hhhHH----HHHHHHHHHHHHHHHHHhhhhcchHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Q 001446 477 LRVADMFKVLVPTVFD--KQGAQ----LLAVAFLVVSRTWISDRIASLNGTTVKYVLEQDKASFVRLIGVSVLQSAASSF 550 (1075)
Q Consensus 477 ~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (1075)
+ ..|+.|+..... ..... +...++..+..+|++.|....... ..... .+++++++.+++..+
T Consensus 898 ~---~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~------~~~~~---~~l~~y~~l~~~~~~ 965 (1495)
T PLN03232 898 W---NVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQSTPK------SYSPG---FYIVVYALLGFGQVA 965 (1495)
T ss_pred H---HHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC------CCCcc---hHHHHHHHHHHHHHH
Confidence 1 223333222110 00000 111122234567777776432100 00011 122333333332222
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhccCC-ceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHHHHHHH
Q 001446 551 IAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDILWF 629 (1075)
Q Consensus 551 ~~~~~~~~~~~~~~~~r~~l~~~ll~~~l~~~-~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~~~~~~ 629 (1075)
..+...++......+....++++++++.++.+ .||+ ....+++.+|+++|++.++..++..+..++..++.++..
T Consensus 966 ~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~----~~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~ 1041 (1495)
T PLN03232 966 VTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFH----TNPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLST 1041 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeC----cCCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222233333444445555666666666544 6776 345578999999999999999888666655544333222
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhc----hhhhhHHHHHHHhhHHhhhcCCcHHHHHHHH
Q 001446 630 TWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLE----GTFRFMHERLRAHAESVAFFGGGAREKAMIE 705 (1075)
Q Consensus 630 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~~ 705 (1075)
...+..+... .+++++++++...+.+.+.. ....+.++.+ +.+-....+...+.++|++|+.+++ +.
T Consensus 1042 ~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~----~~ 1112 (1495)
T PLN03232 1042 FALIGTVSTI--SLWAIMPLLILFYAAYLYYQ---STSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDR----MA 1112 (1495)
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHH----HH
Confidence 1111111100 01111111111111111100 0111111111 1111222333456789999997543 33
Q ss_pred HHHHHHHHHHHHH-----HHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccch-hhhhhhHHHHHHHHHHHHHHHH
Q 001446 706 SRFRELLEHSLLL-----LKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRA-LVSTQGELAHALRFLASVVSQS 779 (1075)
Q Consensus 706 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~l~~~~~~~~~~ 779 (1075)
+.+.+..+..++. ...+|+...+ .++.. .+.+..+. +.+...+... .....+.++ .+..+...+
T Consensus 1113 ~~~~~~~~~~~~~~~~~~~~~~wl~~~~-~~~~~----~~~~~~~~-~~v~~~~~~~~~~~~~~~~g----~~~~~~~~~ 1182 (1495)
T PLN03232 1113 KINGKSMDNNIRFTLANTSSNRWLTIRL-ETLGG----VMIWLTAT-FAVLRNGNAENQAGFASTMG----LLLSYTLNI 1182 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH----HHHHHHHH-HHHHccccccccccchHHHH----HHHHHHHHH
Confidence 4444444433322 1233432222 11110 11111111 1111011100 000011111 122223334
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCC-ccccccccce
Q 001446 780 FLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQLTF 858 (1075)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~-~~~vL~~vs~ 858 (1075)
..++..+...+.++.....+++||.++.+.+++.+... ....+++.||. +|.|+|+||+|+|++ .++||+|+||
T Consensus 1183 ~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~--~~~~~~~~~p~---~g~I~f~nVsf~Y~~~~~~vL~~isl 1257 (1495)
T PLN03232 1183 TTLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAII--ENNRPVSGWPS---RGSIKFEDVHLRYRPGLPPVLHGLSF 1257 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc--cCCCCCCCCCC---CCcEEEEEEEEEECCCCCcccccceE
Confidence 44566677777777888899999999987654332110 11123446876 689999999998854 5789999999
Q ss_pred eecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhhhhcCCCChH
Q 001446 859 EIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSRE 936 (1075)
Q Consensus 859 ~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~ 936 (1075)
+|+||||||||||||||||||+++|+|+|+|++|+|.|||+||+++ +.+|++|++|||||+||+||||+||++...
T Consensus 1258 ~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~-- 1335 (1495)
T PLN03232 1258 FVSPSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSE-- 1335 (1495)
T ss_pred EEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCCC--
Confidence 9999999999999999999999999999999999999999999988 467899999999999999999999995321
Q ss_pred HHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeE
Q 001446 937 EAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGI 1015 (1075)
Q Consensus 937 ~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILi 1015 (1075)
.+|++++++++.++++++++++|+||||.+ +.|.+|||||||||||||||||+|+|||
T Consensus 1336 ---------------------~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILI 1394 (1495)
T PLN03232 1336 ---------------------HNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILV 1394 (1495)
T ss_pred ---------------------CCHHHHHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEE
Confidence 246778888899999999999999999986 6789999999999999999999999999
Q ss_pred eeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1016 LDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1016 LDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
||||||+||.++|+.|++.+++ ++||+|+||||++++...|++++|++|.
T Consensus 1395 LDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1446 (1495)
T PLN03232 1395 LDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDKILVLSSGQ 1446 (1495)
T ss_pred EECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCCEEEEEECCE
Confidence 9999999999999999998865 5999999999999999999999998775
No 5
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=2.6e-108 Score=1080.33 Aligned_cols=960 Identities=16% Similarity=0.165 Sum_probs=585.2
Q ss_pred chhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 8 AFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVA 87 (1075)
Q Consensus 8 ~~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (1075)
.+.++..+..+..+++-..+..+.++++.||+|++|+...+++.+..+...+..++ ..+...+..+.. +....+.
T Consensus 480 ~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~----~~~~~~~~~~~~-~~~~~~~ 554 (1522)
T TIGR00957 480 KTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKK----SAYLHAVGTFTW-VCTPFLV 554 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHH-HHHHHHH
Confidence 34444444455555666677888889999999999999988777766554433221 122222211111 1111111
Q ss_pred HHHHHhhhhccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCC
Q 001446 88 VILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSP 167 (1075)
Q Consensus 88 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~ 167 (1075)
.++.+..|.. ..+...++...++..+ ..+..+...+..+......+.+...+.+|+.++++.+++... . .
T Consensus 555 ~~~~f~~~~~---~~~~~~l~~~~~f~~l----~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~-~--~ 624 (1522)
T TIGR00957 555 ALITFAVYVT---VDENNILDAEKAFVSL----ALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPD-S--I 624 (1522)
T ss_pred HHHHHHHHHH---hcCCCCcCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccc-c--c
Confidence 1111111110 0001112222233322 112223345566777778888899999999998764432110 0 0
Q ss_pred CCCCCCCCCCCCccEEEEeEEEEcCC-CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc
Q 001446 168 QRNGSRNYFSEANYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS 246 (1075)
Q Consensus 168 ~~~~~~~~~~~~~~i~~~~v~~~~~~-~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~ 246 (1075)
.. ..........++++|+++.|++ .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 625 ~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--- 699 (1522)
T TIGR00957 625 ER--RTIKPGEGNSITVHNATFTWARDLPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKG--- 699 (1522)
T ss_pred cc--cccCCCCCCcEEEEEeEEEcCCCCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECC---
Confidence 00 0000011236999999999975 35799999999999999999999999999999999999999999999987
Q ss_pred cccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCChhHHHH
Q 001446 247 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQR 323 (1075)
Q Consensus 247 ~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkqR 323 (1075)
+|+||||+||++++|++|||.++... +++++.++++.|++.++++.+|.++++ +.|.+||||||||
T Consensus 700 ----~i~yv~Q~~~l~~~Ti~eNI~~g~~~-------~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqR 768 (1522)
T TIGR00957 700 ----SVAYVPQQAWIQNDSLRENILFGKAL-------NEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQR 768 (1522)
T ss_pred ----EEEEEcCCccccCCcHHHHhhcCCcc-------CHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHH
Confidence 69999999999999999999997532 345678899999999999988877644 5678999999999
Q ss_pred HHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh-----cCCeEEEEecChhhHhhCCeEEEEcCCCcEEEecCCCC
Q 001446 324 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA-----MGTSCITISHRPALVAFHDVVLSLDGEGEWRVHDKRDG 398 (1075)
Q Consensus 324 l~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~-----~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~~~~~~~~~ 398 (1075)
++||||++++|+++|||||||+||+++++++++.+.+ .++|+|+|||+++.+..||+|++|++ | ...+.+...
T Consensus 769 iaLARAl~~~~~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~-G-~i~~~g~~~ 846 (1522)
T TIGR00957 769 VSLARAVYSNADIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSG-G-KISEMGSYQ 846 (1522)
T ss_pred HHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecC-C-eEEeeCCHH
Confidence 9999999999999999999999999999999988742 37899999999999999999999985 3 233333222
Q ss_pred ccccccccccc----ccccccccc-hhh-------hhHHHhhhhc----c--cccccCC----cchhhhHHHHhh-cCCC
Q 001446 399 SSVVTKSGINM----IKSSETDRQ-SDA-------MAVEQAFVTA----K--KDSAFSN----PKAQSYVSEVIA-ASPI 455 (1075)
Q Consensus 399 ~~~~~~~~~~~----~~~~~~~~~-~~~-------~~~~~~~~~~----~--~~~~~~~----~~~~~~~~~~~~-~~~~ 455 (1075)
+.......... ....+.... .+. .......... . ....... ............ ....
T Consensus 847 ~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (1522)
T TIGR00957 847 ELLQRDGAFAEFLRTYAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGSSAE 926 (1522)
T ss_pred HHHhcchhHHHHHHhhccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccccccccccc
Confidence 21110000000 000000000 000 0000000000 0 0000000 000000000000 0000
Q ss_pred CCCCCCCCCcccc----cCCCCcchhhHHhHHHhhhcccchhhhH-----HHHHHHHHHHHHHHHHHHhhhhcchHHHHH
Q 001446 456 ADHNVPLPVFPQL----KSAPRILPLRVADMFKVLVPTVFDKQGA-----QLLAVAFLVVSRTWISDRIASLNGTTVKYV 526 (1075)
Q Consensus 456 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 526 (1075)
............. .+..+.+. ...|+.|+......... .+...++..+..+|++.|.......
T Consensus 927 ~~~~~~~~~~~~~~~~e~~~~g~v~---~~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~----- 998 (1522)
T TIGR00957 927 LQKAEAKEETWKLMEADKAQTGQVE---LSVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVN----- 998 (1522)
T ss_pred ccccccccchhhhHHHHHHhcCccc---HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-----
Confidence 0000000000000 00111111 22334343332111000 0111122335567887776431100
Q ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccCC-ceEEEecCCCCCCCCcchhHHHH
Q 001446 527 LEQDKASFVRLIGVSVLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDL 605 (1075)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~ll~~~l~~~-~~~~~~~~~~~~~~~~~r~s~D~ 605 (1075)
.+......+++++++.+++..+..+...++......+...++|+++++..++.+ .||+ ....+++.+||++|+
T Consensus 999 --~~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~----~~~~G~ilnR~s~Di 1072 (1522)
T TIGR00957 999 --GTQNNTSLRLSVYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFE----RTPSGNLVNRFSKEL 1072 (1522)
T ss_pred --CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhc----cCChHHHHHHHHHHH
Confidence 000000012223322222222222222233333444455566666666666544 6776 345578999999999
Q ss_pred HHHHHHHHHHhhhhhHhHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhc----hhhhhHH
Q 001446 606 EKLTTDLSGLVTGMVKPSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLE----GTFRFMH 681 (1075)
Q Consensus 606 ~~~~~~l~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~r~~~ 681 (1075)
+.++..++..+..++..++.++.....+...... ++++++++++...++.... .....+.++.+ +.+....
T Consensus 1073 ~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~r~~~~~~~~~~s~l~~~~ 1147 (1522)
T TIGR00957 1073 DTVDSMIPPVIKMFMGSLFNVIGALIVILLATPI--AAVIIPPLGLLYFFVQRFY---VASSRQLKRLESVSRSPVYSHF 1147 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhhHHHHHH
Confidence 9999998877666655544332221111111110 1111111111111111110 01111112222 1111222
Q ss_pred HHHHHhhHHhhhcCCcHHHHHHHHHHHHHHHHHHHH-----HHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccc
Q 001446 682 ERLRAHAESVAFFGGGAREKAMIESRFRELLEHSLL-----LLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDR 756 (1075)
Q Consensus 682 ~~~~~~~~~i~~~~~~~~e~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 756 (1075)
.+...+.++|++|++++. +.+.+.+..+..++ ....+|+...+ .++...+ +.+... +.....+.
T Consensus 1148 ~E~l~Gi~tIraf~~~~~----f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~--~~v~~~~~- 1216 (1522)
T TIGR00957 1148 NETLLGVSVIRAFEEQER----FIHQSDLKVDENQKAYYPSIVANRWLAVRL-ECVGNCI---VLFAAL--FAVISRHS- 1216 (1522)
T ss_pred HHHhCCcHHHHHhhhHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH---HHHHHH--HHHHhcCC-
Confidence 333456788999997654 33444455443332 23444543322 2221110 000111 11110110
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCc
Q 001446 757 ALVSTQGELAHALRFLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDS 836 (1075)
Q Consensus 757 ~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~ 836 (1075)
.+.|.++.++.+ ...+..++..+...+.++.....|++|+.++.+.+++.+.. .....+++.||. +|.
T Consensus 1217 ---~~~g~l~~~l~~----~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~--~~~~~~~~~wp~---~g~ 1284 (1522)
T TIGR00957 1217 ---LSAGLVGLSVSY----SLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQ--IQETAPPSGWPP---RGR 1284 (1522)
T ss_pred ---CCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccc--ccCCCCCCCCCC---CCc
Confidence 123444433333 33445577778888888888999999999998654432210 011223456886 689
Q ss_pred eEEeeeeeeCCCc-cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEE
Q 001446 837 ISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFY 913 (1075)
Q Consensus 837 I~f~~V~~~yp~~-~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~ 913 (1075)
|+|+||+|+|+++ ++||+|+||+|+||||||||||||||||||+++|+|||||++|+|.|||+||+++ +.+|++|++
T Consensus 1285 I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~i 1364 (1522)
T TIGR00957 1285 VEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITI 1364 (1522)
T ss_pred EEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeE
Confidence 9999999999764 6899999999999999999999999999999999999999999999999999998 468999999
Q ss_pred EcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccC
Q 001446 914 VPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDI 992 (1075)
Q Consensus 914 VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~ 992 (1075)
|||||+||+||||+||+ |.+. .+|++++++++.++++++++++|+||||.+ +.|.+
T Consensus 1365 VpQdp~LF~gTIr~NLd-p~~~----------------------~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~ 1421 (1522)
T TIGR00957 1365 IPQDPVLFSGSLRMNLD-PFSQ----------------------YSDEEVWWALELAHLKTFVSALPDKLDHECAEGGEN 1421 (1522)
T ss_pred ECCCCcccCccHHHHcC-cccC----------------------CCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCc
Confidence 99999999999999998 4321 346778888899999999999999999987 57899
Q ss_pred CChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 993 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 993 LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
|||||||||||||||||+|||||||||||+||.++|+.|++.+++ ++||+|+||||++++...|++++|++|.
T Consensus 1422 LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~ 1496 (1522)
T TIGR00957 1422 LSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGE 1496 (1522)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999998865 6999999999999999999999998775
No 6
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=4.1e-107 Score=1055.63 Aligned_cols=982 Identities=15% Similarity=0.178 Sum_probs=583.5
Q ss_pred hcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 12 LMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILI 91 (1075)
Q Consensus 12 ~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (1075)
.....++..+++-..+.....++++|+.|++|+.+.+++.+......+.. .+.....++....... +.....+
T Consensus 224 ~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~---~k~~~~~~~~~~~~~~----~~~~~~~ 296 (1466)
T PTZ00265 224 NKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYI---LKANFMESLHIGMING----FILASYA 296 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH----HHHHHHH
Confidence 33344455567777888888899999999999999987765544333322 2222222222211111 1111122
Q ss_pred HhhhhccccccCc---------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 001446 92 IEPFFAGNLKPDT---------STLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSI 162 (1075)
Q Consensus 92 ~~~~~~~~l~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~ 162 (1075)
+..|+++.+.... .+.|. +++.+ ...+. .+..+..+...+..+.....+++|+.++++.+++...
T Consensus 297 l~~~~G~~lv~~g~~~~~~~~~~t~g~--v~~~~---~~~l~-~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~~~~~~ 370 (1466)
T PTZ00265 297 FGFWYGTRIIISDLSNQQPNNDFHGGS--VISIL---LGVLI-SMFMLTIILPNITEYMKSLEATNSLYEIINRKPLVEN 370 (1466)
T ss_pred HHHHHHHHHHHcCCcccccccccchhH--HHHHH---HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 2335555443321 12222 22211 11121 1223445566677888889999999998876544321
Q ss_pred cCCCCCCCCCCCCCCCCccEEEEeEEEEcCCC--CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEE
Q 001446 163 EDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG--NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIA 240 (1075)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~--~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~ 240 (1075)
... ....+....|+++||+|.|++. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.
T Consensus 371 ~~~-------~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~ 443 (1466)
T PTZ00265 371 NDD-------GKKLKDIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEGDII 443 (1466)
T ss_pred CCC-------CccCCCCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCCeEE
Confidence 100 0011112369999999999853 4799999999999999999999999999999999999999999999
Q ss_pred eC-CcC------ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCc-----------------------------------
Q 001446 241 KP-GVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQ----------------------------------- 278 (1075)
Q Consensus 241 ~~-~~~------~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~----------------------------------- 278 (1075)
++ |.+ ..++++|+||||+|.+|++|++|||.++.....
T Consensus 444 i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (1466)
T PTZ00265 444 INDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDLN 523 (1466)
T ss_pred EeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccccccccchhh
Confidence 94 543 235778999999999999999999998742100
Q ss_pred ----------------ccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCChhHHHHHHHHHHHcCCCCEEEE
Q 001446 279 ----------------EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAIL 339 (1075)
Q Consensus 279 ----------------~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkqRl~lAral~~~p~illL 339 (1075)
.....+++++.++++.+++++++.++|.+.++ +.|.+|||||||||+|||||+++|+||||
T Consensus 524 ~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~ILlL 603 (1466)
T PTZ00265 524 DMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKILIL 603 (1466)
T ss_pred hcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 00124567899999999999999999987553 45789999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHhhCCeEEEEcCC----------------------------
Q 001446 340 DECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDGE---------------------------- 387 (1075)
Q Consensus 340 DEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~~~d~i~~l~~~---------------------------- 387 (1075)
|||||+||++++..+.+.+++ .|+|+|+|||+++.++.||+|++|+++
T Consensus 604 DEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1466)
T PTZ00265 604 DEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDNKENNNKNNK 683 (1466)
T ss_pred eCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccccccccccccccccccc
Confidence 999999999999999988864 379999999999999999999999763
Q ss_pred -----------------CcEEEecCCCCccccccccc-cc-cccccc--ccch----hhhhHHHhhhhccccccc-CCcc
Q 001446 388 -----------------GEWRVHDKRDGSSVVTKSGI-NM-IKSSET--DRQS----DAMAVEQAFVTAKKDSAF-SNPK 441 (1075)
Q Consensus 388 -----------------g~~~~~~~~~~~~~~~~~~~-~~-~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~-~~~~ 441 (1075)
|+.+++.+.|++++....+. .. ...+.. .... +.....+........... ....
T Consensus 684 ~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (1466)
T PTZ00265 684 DDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSSAYKDSERGYDPDEM 763 (1466)
T ss_pred ccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhccccccccccccccccccccccccccccccccccc
Confidence 22344444444443211100 00 000000 0000 000000000000000000 0000
Q ss_pred hhhh-HHHHh-h---cCCC--C--CCCC---CCCCcccccCCCCcchhhHHhHHHhhhcccchhhhHHHHHHHH---HHH
Q 001446 442 AQSY-VSEVI-A---ASPI--A--DHNV---PLPVFPQLKSAPRILPLRVADMFKVLVPTVFDKQGAQLLAVAF---LVV 506 (1075)
Q Consensus 442 ~~~~-~~~~~-~---~~~~--~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 506 (1075)
.... ..... . .... . .... +.+......+.....+..+..+++.++++......+.+..++. ..+
T Consensus 764 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (1466)
T PTZ00265 764 NGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKDVTIIALSILVAGGLYPV 843 (1466)
T ss_pred cccccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 00000 0 0000 0 0000 0000000000000011111122222222211000111111100 001
Q ss_pred HHHHHHHHhhhhcchHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccCCceEE
Q 001446 507 SRTWISDRIASLNGTTVKYVLEQDKASFVRLIGVSVLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKNSFYK 586 (1075)
Q Consensus 507 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~ll~~~l~~~~~~~ 586 (1075)
..+.++.++...... ...........+.+++++++.+++..+..+....+..++..++|..+++++++. +..||+
T Consensus 844 ~~~~~~~~i~~~~~~--~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ll~~---~~~~fd 918 (1466)
T PTZ00265 844 FALLYAKYVSTLFDF--ANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFENILYQ---EISFFD 918 (1466)
T ss_pred HHHHHHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CHHHhC
Confidence 111112222111000 000000000111122333333444445555666667777777788777777652 335665
Q ss_pred EecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhH-------hHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHh
Q 001446 587 VFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVK-------PSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSV 659 (1075)
Q Consensus 587 ~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~-------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (1075)
-. ....+++.+|+++|++.+...+...+..++. .++..++++|+++++. +.+++++...+....
T Consensus 919 ~~--~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~-------~~~~~~~~~~~~~~~ 989 (1466)
T PTZ00265 919 QD--KHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVL-------TGTYFIFMRVFAIRA 989 (1466)
T ss_pred CC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHH
Confidence 21 1235678899999999988766544433332 2233345566655432 111111111111100
Q ss_pred c----cccccc----cH------HHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001446 660 T----PEFGDL----TS------REQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELLEHSLLLLKKKWLF 725 (1075)
Q Consensus 660 ~----~~~~~~----~~------~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 725 (1075)
. ...... .. ..++..+.......+...+.++|++|+.+..+.+.+.+..+.......+... +.
T Consensus 990 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~---~~ 1066 (1466)
T PTZ00265 990 RLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTL---VN 1066 (1466)
T ss_pred HHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH---HH
Confidence 0 000000 00 0011111223334455567889999998877666655554444332222111 11
Q ss_pred hhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHH
Q 001446 726 GILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDILELHRKFVELSGGINRIFE 805 (1075)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~ 805 (1075)
+....+ .++...+..+++++|+........ .+.|.+..++. .+.....+++.+.....++..+..+.+|+++
T Consensus 1067 ~~~~~~--~~~~~~~~~~~~~~~G~~lv~~g~--it~g~l~~~~~----~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ 1138 (1466)
T PTZ00265 1067 SMLWGF--SQSAQLFINSFAYWFGSFLIRRGT--ILVDDFMKSLF----TFLFTGSYAGKLMSLKGDSENAKLSFEKYYP 1138 (1466)
T ss_pred HHHHHH--HHHHHHHHHHHHHHHHHHHHHcCC--CCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 111112223344445433221111 11222222111 1111223456677788888899999999999
Q ss_pred HHHHHhhcCCCCCcccCCccCcC-CCCCCCCceEEeeeeeeCCCc--cccccccceeecCCCeEEEEcCCCCcHHHHHHH
Q 001446 806 LEELLDAAQPGDDEISGSSQHKW-NSTDYQDSISFSKLDIITPSQ--KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRV 882 (1075)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~w-~~~~~~g~I~f~~V~~~yp~~--~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~l 882 (1075)
+++.+++.+... ... ... +.....|.|+|+||+|+||+. .+||+|+||+|+|||+||||||||||||||+++
T Consensus 1139 ll~~~~~~~~~~---~~~--~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~L 1213 (1466)
T PTZ00265 1139 LIIRKSNIDVRD---NGG--IRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSL 1213 (1466)
T ss_pred HHCCCCcCCCCC---Ccc--cccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHH
Confidence 987543221110 000 000 011235789999999999863 489999999999999999999999999999999
Q ss_pred HhCCCCC------------------------------------------------------CCCeEecCCCCCccc--cC
Q 001446 883 LRGLWPV------------------------------------------------------VSGSLTKPSQHIDEE--AG 906 (1075)
Q Consensus 883 L~Rl~~~------------------------------------------------------~sG~I~idg~di~~~--~~ 906 (1075)
|+|||+| ++|+|.+||+||+++ ..
T Consensus 1214 L~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~ 1293 (1466)
T PTZ00265 1214 LMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKD 1293 (1466)
T ss_pred HHHhCCCccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHH
Confidence 9999998 699999999999988 46
Q ss_pred CcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccc
Q 001446 907 SGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 986 (1075)
Q Consensus 907 ~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~ 986 (1075)
+|++|+||||||+||+|||||||.|+.. +.+|++++++++.++++++++++|+||||.
T Consensus 1294 lR~~i~~V~Qep~LF~gTIreNI~~g~~----------------------~at~eeI~~A~k~A~l~~fI~~LP~GydT~ 1351 (1466)
T PTZ00265 1294 LRNLFSIVSQEPMLFNMSIYENIKFGKE----------------------DATREDVKRACKFAAIDEFIESLPNKYDTN 1351 (1466)
T ss_pred HHhhccEeCCCCccccccHHHHHhcCCC----------------------CCCHHHHHHHHHHcCCHHHHHhCccccCCc
Confidence 8899999999999999999999998632 123556667777777888888899999998
Q ss_pred c-ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCchhhccceEEE
Q 001446 987 L-NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRL 1061 (1075)
Q Consensus 987 ~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i~~~~~~l~l 1061 (1075)
+ +.|.+|||||||||||||||+|+|+||||||||||||.++|+.|++.+.. .++|+|+||||+++++..|++++|
T Consensus 1352 VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl 1431 (1466)
T PTZ00265 1352 VGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVF 1431 (1466)
T ss_pred cCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEE
Confidence 7 57899999999999999999999999999999999999999999887754 389999999999999999999999
Q ss_pred EcCC
Q 001446 1062 IDGE 1065 (1075)
Q Consensus 1062 ~~g~ 1065 (1075)
++|+
T Consensus 1432 ~~~~ 1435 (1466)
T PTZ00265 1432 NNPD 1435 (1466)
T ss_pred eCCC
Confidence 8754
No 7
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.4e-104 Score=1038.77 Aligned_cols=796 Identities=17% Similarity=0.196 Sum_probs=490.1
Q ss_pred CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCccccccEEEEcCCCCCCcCCHHHHhcCC
Q 001446 194 GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYP 273 (1075)
Q Consensus 194 ~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~~~~~~tv~~ni~~~ 273 (1075)
++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+. ++|+||||+||++++|++|||.++
T Consensus 672 ~~~iL~~isl~i~~G~~~~IiG~nGsGKSTLL~~i~G~~~~~~G~i~~~-------~~i~yv~Q~~~l~~~Tv~enI~~~ 744 (1560)
T PTZ00243 672 PKVLLRDVSVSVPRGKLTVVLGATGSGKSTLLQSLLSQFEISEGRVWAE-------RSIAYVPQQAWIMNATVRGNILFF 744 (1560)
T ss_pred CceeEeeeEEEECCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEEC-------CeEEEEeCCCccCCCcHHHHHHcC
Confidence 3568999999999999999999999999999999999999999999875 379999999999999999999986
Q ss_pred CCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHH
Q 001446 274 LTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDM 350 (1075)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~ 350 (1075)
.. .+.+++.++++.++++++++.+|.+..+ +.|.+|||||||||+||||++.+|+++|||||||+||+++
T Consensus 745 ~~-------~~~~~~~~~~~~~~l~~~l~~l~~g~~t~i~~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~ 817 (1560)
T PTZ00243 745 DE-------EDAARLADAVRVSQLEADLAQLGGGLETEIGEKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHV 817 (1560)
T ss_pred Ch-------hhHHHHHHHHHHhhhHHHHHHhhccchHHhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHH
Confidence 42 2334677888889999999988766543 4578999999999999999999999999999999999999
Q ss_pred HHHHHHHHH---hcCCeEEEEecChhhHhhCCeEEEEcCCCcEEEecCCCCcccccccccccccccccccch--hhhhHH
Q 001446 351 EERFCAKVR---AMGTSCITISHRPALVAFHDVVLSLDGEGEWRVHDKRDGSSVVTKSGINMIKSSETDRQS--DAMAVE 425 (1075)
Q Consensus 351 ~~~i~~~l~---~~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 425 (1075)
.+++++.+. ..|+|+|+|||+++.+..+|+|++|+++ .....+...+.. ................. +.....
T Consensus 818 ~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~~G--~i~~~G~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (1560)
T PTZ00243 818 GERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALGDG--RVEFSGSSADFM-RTSLYATLAAELKENKDSKEGDADA 894 (1560)
T ss_pred HHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECC--EEEEecCHHHHH-hChHHHHHHHhhccccccccccccc
Confidence 988877532 2489999999999999999999999863 233332222111 00000000000000000 000000
Q ss_pred HhhhhcccccccCCcchhhhHHHHhhcCCCCCCCCCCCCccccc----CCCCcchhhHHhHHHhhhcccchhhhHHH--H
Q 001446 426 QAFVTAKKDSAFSNPKAQSYVSEVIAASPIADHNVPLPVFPQLK----SAPRILPLRVADMFKVLVPTVFDKQGAQL--L 499 (1075)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 499 (1075)
+...................... ......+............ +..+.+++ ..|+.|+..+.......+ +
T Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~---~~y~~Y~~~~g~~~~~~~~l~ 969 (1560)
T PTZ00243 895 EVAEVDAAPGGAVDHEPPVAKQE--GNAEGGDGAALDAAAGRLMTREEKASGSVPW---STYVAYLRFCGGLHAAGFVLA 969 (1560)
T ss_pred ccccccccccccccccccccccc--cccccccccccccccchhhhHHHHhcCcccH---HHHHHHHHHhhhHHHHHHHHH
Confidence 00000000000000000000000 0000000000000000000 01111222 223333322111000000 0
Q ss_pred ----HHHHHHHHHHHHHHHhhhhcchHHHHHHhcCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 001446 500 ----AVAFLVVSRTWISDRIASLNGTTVKYVLEQDKASFV-RLIGVSVLQSAASSFIAPSIRHLTARLALGWRIRMTQHL 574 (1075)
Q Consensus 500 ----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l 574 (1075)
..++..+..+|++.|...... .+...++ .|+++.++.. +..++.....+ .........+|+.+
T Consensus 970 ~~~~~~~~~~~~~~wl~~w~~~~~~--------~~~~~~l~~y~~~~~~~~-~~~~l~~~~~~---~~~~~~~~~l~~~l 1037 (1560)
T PTZ00243 970 TFAVTELVTVSSGVWLSMWSTRSFK--------LSAATYLYVYLGIVLLGT-FSVPLRFFLSY---EAMRRGSRNMHRDL 1037 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccC--------CCcccHHHHHHHHHHHHH-HHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 111223445677766542110 0111111 1111111111 11111111111 11222234566666
Q ss_pred HHHhccCC-ceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHHHHHHHHHHHHHhhchhhHHHHHHHHHHHH
Q 001446 575 LKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDILWFTWRMKALTGQRGVAILYAYMLLGL 653 (1075)
Q Consensus 575 l~~~l~~~-~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 653 (1075)
+++.++.+ .||+ ....+++.+||++|++.++..++..+..++..++.++.....+....+. .+.++++++++..
T Consensus 1038 ~~~ll~~p~~ffd----~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p~-~~~~~i~~~~~~~ 1112 (1560)
T PTZ00243 1038 LRSVSRGTMSFFD----TTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSASQPF-VLVALVPCGYLYY 1112 (1560)
T ss_pred HHHHHcCChhhcc----CCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 66666654 6776 3456789999999999999998877666655544433222222211110 0111111111111
Q ss_pred HHHHHhccccccccHHHHhh----chhhhhHHHHHHHhhHHhhhcCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhh
Q 001446 654 GFLRSVTPEFGDLTSREQQL----EGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELLEHSLL-LLKKKWLFGIL 728 (1075)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~----~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 728 (1075)
.+.+.+ .....+.++. .+.+.....+...+.++|++|+.++...+.+.+..+...+.... ....+|+ .+.
T Consensus 1113 ~i~~~~----~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~-~~~ 1187 (1560)
T PTZ00243 1113 RLMQFY----NSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWL-GVR 1187 (1560)
T ss_pred HHHHHH----HHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 111111 1111122221 11122233444456789999998776655555555554443332 2334443 333
Q ss_pred HHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHH
Q 001446 729 DDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEE 808 (1075)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~ 808 (1075)
..++...+...+. +...++. ..+... ...|.++. +..+...+..++..+...+..+.....+++||.++.+
T Consensus 1188 ~~~l~~~~~~~~~--~~~~~~~-~~~~~~--~~~g~l~~----~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~ 1258 (1560)
T PTZ00243 1188 VEFLSNIVVTVIA--LIGVIGT-MLRATS--QEIGLVSL----SLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTD 1258 (1560)
T ss_pred HHHHHHHHHHHHH--HHHHHHH-HhccCC--CCHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2332211111111 1111110 000000 11222222 2223344556777778888888888999999999986
Q ss_pred HHhhcCCCC-C---------------------cccCCccCcCCCCCCCCceEEeeeeeeCCCc-cccccccceeecCCCe
Q 001446 809 LLDAAQPGD-D---------------------EISGSSQHKWNSTDYQDSISFSKLDIITPSQ-KLLARQLTFEIVPGKS 865 (1075)
Q Consensus 809 ~~~~~~~~~-~---------------------~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~-~~vL~~vs~~I~~Ge~ 865 (1075)
..++++... . .....++..||.....|.|+|+||+|+|+++ ++||+||||+|+||||
T Consensus 1259 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL~~vsf~I~~Gek 1338 (1560)
T PTZ00243 1259 EVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVLRGVSFRIAPREK 1338 (1560)
T ss_pred cCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCceeecceEEECCCCE
Confidence 432211000 0 0001112234433346899999999999764 6799999999999999
Q ss_pred EEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHh
Q 001446 866 LLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRAL 943 (1075)
Q Consensus 866 vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~ 943 (1075)
||||||||||||||+++|+|||+|++|+|.|||+||+++ +.+|++|++|||||+||+||||+||+ |..
T Consensus 1339 VaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNId-p~~--------- 1408 (1560)
T PTZ00243 1339 VGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVD-PFL--------- 1408 (1560)
T ss_pred EEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhC-ccc---------
Confidence 999999999999999999999999999999999999987 46789999999999999999999998 432
Q ss_pred hhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcC-CCEeEeeccCC
Q 001446 944 KLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHK-PKFGILDECTN 1021 (1075)
Q Consensus 944 ~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~-p~ILiLDEATS 1021 (1075)
+.+|++++++++.++++++++++|+||||.+ +.|.+|||||||||||||||||+ |+|||||||||
T Consensus 1409 -------------~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATS 1475 (1560)
T PTZ00243 1409 -------------EASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATA 1475 (1560)
T ss_pred -------------CCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCc
Confidence 1346778888899999999999999999986 67899999999999999999996 89999999999
Q ss_pred CCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1022 ATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1022 alD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
+||.++|+.|++.+++ .++|+|+||||++++...|++++|++|.
T Consensus 1476 aLD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~ 1521 (1560)
T PTZ00243 1476 NIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGA 1521 (1560)
T ss_pred cCCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCE
Confidence 9999999999998864 5899999999999999999999998775
No 8
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=8.1e-103 Score=1024.80 Aligned_cols=958 Identities=16% Similarity=0.166 Sum_probs=568.7
Q ss_pred hhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 10 GKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVI 89 (1075)
Q Consensus 10 ~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (1075)
.++..+..+..+++-..+..+.++++.||+|++|+.+.+++.+..+...+..++... .......+. +....+..+
T Consensus 246 ~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~----~~~~~~~~~-~~~~~~~~~ 320 (1490)
T TIGR01271 246 MPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAY----LRYFYSSAF-FFSGFFVVF 320 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHH-HHHHHHHHH
Confidence 333333444444555577888889999999999999988777766544443332221 111111111 111111111
Q ss_pred HHHhhhhccccccCcchhhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCC
Q 001446 90 LIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSL-GTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQ 168 (1075)
Q Consensus 90 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~~ 168 (1075)
+.+..|.. .+..+.+ .+|+.+.++ +. +...+ ..+...+..+.+....++|+.+++..++.... ..
T Consensus 321 ~~f~~y~~----~~~~~~~--~~ft~lal~-~l---L~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~-~~--- 386 (1490)
T TIGR01271 321 LSVVPYAL----IKGIILR--RIFTTISYC-IV---LRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTL-EY--- 386 (1490)
T ss_pred HHHHHHHH----hCCCcHH--HHHHHHHHH-HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccc-cc---
Confidence 11111110 0111222 223322111 11 11122 23455556677788889999988854332110 00
Q ss_pred CCCCCCCCCCCccEEEEeEEEEcCC---------------------------------CCeeeeeceEEEeCCCEEEEEc
Q 001446 169 RNGSRNYFSEANYIEFSGVKVVTPT---------------------------------GNVLVENLTLKVEPGSNLLITG 215 (1075)
Q Consensus 169 ~~~~~~~~~~~~~i~~~~v~~~~~~---------------------------------~~~~l~~i~l~i~~g~~~~i~G 215 (1075)
......++++|+++.|+. .+++|+|+||+|++|++++|+|
T Consensus 387 -------~~~~~~i~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G 459 (1490)
T TIGR01271 387 -------NLTTTEVEMVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAG 459 (1490)
T ss_pred -------cCCCCceEEecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEEC
Confidence 001123666666665531 1468999999999999999999
Q ss_pred CCcchHHHHHHHHhCCCCCCccEEEeCCcCccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHc
Q 001446 216 PNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNV 295 (1075)
Q Consensus 216 ~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~ 295 (1075)
|||||||||+++|+|+++|++|+|.++| +|+||||+||++++|++|||.|+... +.+++.++++.|
T Consensus 460 ~~GsGKSTLl~~l~G~~~~~~G~i~~~g-------~iayv~Q~~~l~~~Ti~eNI~~g~~~-------~~~~~~~~~~~~ 525 (1490)
T TIGR01271 460 STGSGKSSLLMMIMGELEPSEGKIKHSG-------RISFSPQTSWIMPGTIKDNIIFGLSY-------DEYRYTSVIKAC 525 (1490)
T ss_pred CCCCCHHHHHHHHhCCCCCCCceEEECC-------EEEEEeCCCccCCccHHHHHHhcccc-------chHHHHHHHHHH
Confidence 9999999999999999999999999987 69999999999999999999998532 234577888999
Q ss_pred CChhHHhcCCCCccc---CCCCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHH-Hh--cCCeEEEEe
Q 001446 296 DLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKV-RA--MGTSCITIS 369 (1075)
Q Consensus 296 ~l~~~~~~~~~~~~~---~~g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l-~~--~~~t~i~vt 369 (1075)
+|.++++.+|.++.+ +.|.+|||||||||+||||++++|+++||||||||||+++++++++.+ .+ .++|+|+||
T Consensus 526 ~L~~~l~~l~~g~~t~vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvt 605 (1490)
T TIGR01271 526 QLEEDIALFPEKDKTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVT 605 (1490)
T ss_pred hHHHHHHhccccccccccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 999999998877654 457899999999999999999999999999999999999999999753 32 489999999
Q ss_pred cChhhHhhCCeEEEEcCCCcEEEecCCCCccccccc-------------c---cc-------------cc-cc-----cc
Q 001446 370 HRPALVAFHDVVLSLDGEGEWRVHDKRDGSSVVTKS-------------G---IN-------------MI-KS-----SE 414 (1075)
Q Consensus 370 H~~~~~~~~d~i~~l~~~g~~~~~~~~~~~~~~~~~-------------~---~~-------------~~-~~-----~~ 414 (1075)
|+++.+..||+|++|+++ . ....+...+...... + .. .. .. .+
T Consensus 606 H~~~~~~~ad~ii~l~~g-~-i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1490)
T TIGR01271 606 SKLEHLKKADKILLLHEG-V-CYFYGTFSELQAKRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPE 683 (1490)
T ss_pred CChHHHHhCCEEEEEECC-E-EEEEcCHHHHHhcChHHHHHHhccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999863 2 222221111100000 0 00 00 00 00
Q ss_pred cc-c----chhh--h------------------------------hHHHhhhhcc------------cccccCCc-----
Q 001446 415 TD-R----QSDA--M------------------------------AVEQAFVTAK------------KDSAFSNP----- 440 (1075)
Q Consensus 415 ~~-~----~~~~--~------------------------------~~~~~~~~~~------------~~~~~~~~----- 440 (1075)
.. . .... . .......... .+......
T Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (1490)
T TIGR01271 684 TIKQSFKQPPPEFAEKRKQSIILNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHH 763 (1490)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccc
Confidence 00 0 0000 0 0000000000 00000000
Q ss_pred ------chhh---------------------hHHHH-h-hc-CC-CCC-----CC-CCCC------C--cc---c-cc--
Q 001446 441 ------KAQS---------------------YVSEV-I-AA-SP-IAD-----HN-VPLP------V--FP---Q-LK-- 469 (1075)
Q Consensus 441 ------~~~~---------------------~~~~~-~-~~-~~-~~~-----~~-~~~~------~--~~---~-~~-- 469 (1075)
.... ...+. . .. .. ... .. .... . .. . ..
T Consensus 764 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (1490)
T TIGR01271 764 GLQHQAQRRQSVLQLMTHSNRGENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADE 843 (1490)
T ss_pred ccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHH
Confidence 0000 00000 0 00 00 000 00 0000 0 00 0 00
Q ss_pred --CCCCcchhhHHhHHHhhhcccchhhh------HHHHHHHHHHHHHHHHHHHhhhhc----chHH---------HHHHh
Q 001446 470 --SAPRILPLRVADMFKVLVPTVFDKQG------AQLLAVAFLVVSRTWISDRIASLN----GTTV---------KYVLE 528 (1075)
Q Consensus 470 --~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~----~~~~---------~~~~~ 528 (1075)
+..+... +..|+.|+........ ..++..++..+..+|+..|..... .... .....
T Consensus 844 e~~~~g~v~---~~vY~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (1490)
T TIGR01271 844 RENVFETTT---WNTYLRYITTNRNLVFVLIFCLVIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIIT 920 (1490)
T ss_pred HHhhcCccc---HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhhHHHHhcccccccccccccccCCCcccccccccc
Confidence 0111112 2334444433211000 011112233456778877653110 0000 00000
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccCC-ceEEEecCCCCCCCCcchhHHHHHH
Q 001446 529 QDKASFVRLIGVSVLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEK 607 (1075)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~ll~~~l~~~-~~~~~~~~~~~~~~~~~r~s~D~~~ 607 (1075)
.....+. +.+++..+++..+..++..++..+...+....+|.++++..++.+ .||+ ....+++.+||++|++.
T Consensus 921 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~----~~~~G~ilnRfs~Di~~ 994 (1490)
T TIGR01271 921 PTSAYYI--FYIYVGTADSVLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLN----TMKAGRILNRFTKDMAI 994 (1490)
T ss_pred CcchhhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhC----CCChhHHHHHHHHHHHH
Confidence 0011111 111111111111111112222233334445566666666666654 5665 33457889999999999
Q ss_pred HHHHHHHHhhhhhHhHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchh----hhhHHHH
Q 001446 608 LTTDLSGLVTGMVKPSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGT----FRFMHER 683 (1075)
Q Consensus 608 ~~~~l~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~r~~~~~ 683 (1075)
++..++..+..++..++.++.+.+.++.+.+. ++++++++++..++++.+. .+...+.++.+.. ......+
T Consensus 995 id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~--l~l~~~~l~~~~~~~~~~~---~~~~r~l~~~~~~~~s~l~~~~~E 1069 (1490)
T TIGR01271 995 IDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPY--IFIAAIPVAVIFIMLRAYF---LRTSQQLKQLESEARSPIFSHLIT 1069 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhhHHHHHHHH
Confidence 99999887777666555444333333222211 1111111111111111110 1111111222211 1122233
Q ss_pred HHHhhHHhhhcCCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhh
Q 001446 684 LRAHAESVAFFGGGAREKAMIESRFRELLEHSL-LLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQ 762 (1075)
Q Consensus 684 ~~~~~~~i~~~~~~~~e~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (1075)
...+..+|++|+++....+.+.+.......... .....+|+...++.+.. .+. + ....+.++... ...
T Consensus 1070 tl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~i~~-~~~--~-~~~~l~~~~~~-------~~~ 1138 (1490)
T TIGR01271 1070 SLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTLRWFQMRIDIIFV-FFF--I-AVTFIAIGTNQ-------DGE 1138 (1490)
T ss_pred HhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH--H-HHHHHHHHHhc-------CCc
Confidence 334678999999877665555444443332222 23445565433322211 100 0 00011111100 112
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCc------------ccCCccCcCCC
Q 001446 763 GELAHALRFLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDE------------ISGSSQHKWNS 830 (1075)
Q Consensus 763 g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~------------~~~~~~~~w~~ 830 (1075)
|.++.++.+. ..+..++..+...+..+.....+++||.++.+.+++.+..... ....+|+.||.
T Consensus 1139 g~~g~~l~~~----~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~ 1214 (1490)
T TIGR01271 1139 GEVGIILTLA----MNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPS 1214 (1490)
T ss_pred cHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCC
Confidence 3333333222 2233455566666677778889999999998765443211100 01123446886
Q ss_pred CCCCCceEEeeeeeeCCC-ccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCC
Q 001446 831 TDYQDSISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGS 907 (1075)
Q Consensus 831 ~~~~g~I~f~~V~~~yp~-~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~ 907 (1075)
.|.|+|+||+|+|++ .++||+|+||+|+||||||||||||||||||+++|+|+|+ .+|+|.|||+||+++ +.+
T Consensus 1215 ---~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~l 1290 (1490)
T TIGR01271 1215 ---GGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTW 1290 (1490)
T ss_pred ---CCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHH
Confidence 689999999998875 6889999999999999999999999999999999999998 799999999999988 458
Q ss_pred cCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc
Q 001446 908 GCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 987 (1075)
Q Consensus 908 r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 987 (1075)
|++|++|||||+||+||||+||+ |.. ..+|++++++++.++|++++..+|+||||.+
T Consensus 1291 R~~is~IpQdp~LF~GTIR~NLd-p~~----------------------~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v 1347 (1490)
T TIGR01271 1291 RKAFGVIPQKVFIFSGTFRKNLD-PYE----------------------QWSDEEIWKVAEEVGLKSVIEQFPDKLDFVL 1347 (1490)
T ss_pred HhceEEEeCCCccCccCHHHHhC-ccc----------------------CCCHHHHHHHHHHCCCHHHHHhCcccccccc
Confidence 89999999999999999999998 542 1357888999999999999999999999987
Q ss_pred -ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcC
Q 001446 988 -NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDG 1064 (1075)
Q Consensus 988 -~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g 1064 (1075)
+.|.+|||||||||||||||||+|||||||||||+||.+++..|++.+++ .+||||+||||++++..+|++++|++|
T Consensus 1348 ~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrIlvL~~G 1427 (1490)
T TIGR01271 1348 VDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLECQQFLVIEGS 1427 (1490)
T ss_pred ccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECC
Confidence 57889999999999999999999999999999999999999999998865 599999999999999999999999877
Q ss_pred C
Q 001446 1065 E 1065 (1075)
Q Consensus 1065 ~ 1065 (1075)
.
T Consensus 1428 ~ 1428 (1490)
T TIGR01271 1428 S 1428 (1490)
T ss_pred E
Confidence 5
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.8e-77 Score=684.31 Aligned_cols=470 Identities=20% Similarity=0.250 Sum_probs=354.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHh
Q 001446 537 LIGVSVLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLV 616 (1075)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~ 616 (1075)
+.++++..+++..+..+++.+...+...+.|..+|.+++++ +..||| ..+.+++.+|++.|...+...++..+
T Consensus 194 l~~l~~~~a~~~~~r~~~~~~a~~rv~~rlR~~lF~sil~Q---diaFFD----~nktGeL~SRLtsD~~~vs~svs~nl 266 (716)
T KOG0058|consen 194 LLGLFLIGALANAIRGGLLQYAGERVVARLRTDLFRSLLRQ---DIAFFD----ENKTGELISRLTSDTQIVSNSVSQNL 266 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhhhhc----cCCccHHHhhhhhhHHHHHHHHHHHH
Confidence 34455566667777788888999999999999999988874 567887 34578899999999999877776655
Q ss_pred hhhhHh-------HHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhH
Q 001446 617 TGMVKP-------SVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAE 689 (1075)
Q Consensus 617 ~~~i~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 689 (1075)
...+.+ +...++.+|+|+++.. +.+ ++.......+++.+.+++.+.|...+......++..+..+
T Consensus 267 s~~lR~~~~~~g~~~~M~~~S~~Ltlv~~-----i~~---P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~r 338 (716)
T KOG0058|consen 267 SDGLRNLVQGFGGLGFMFSLSWRLTLVTL-----IVV---PIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMR 338 (716)
T ss_pred HHHHHHHHHHHHhHHHHhhhhHHHHHHHH-----HHh---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 444433 3334677888876531 111 1112223333444556666667766666667778888899
Q ss_pred HhhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHH
Q 001446 690 SVAFFGGGAREKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHAL 769 (1075)
Q Consensus 690 ~i~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l 769 (1075)
||+.|++|+.|..++.+..++.++..++.......+.....+.. .......++|+........ .+.|++..++
T Consensus 339 TVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~~~~~~~-----~~~~~siL~~Gg~Lv~~g~--mt~g~L~sFl 411 (716)
T KOG0058|consen 339 TVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFFGSTNLLG-----NLAVLSILFYGGHLVLTGS--LTSGALSSFL 411 (716)
T ss_pred hHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHhHHHHHH-----hHHHHHHHHhccchhhcCc--cchhHHHHHH
Confidence 99999999999888877777777655443222211111111111 1122234445443322211 2344444433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCCc
Q 001446 770 RFLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQ 849 (1075)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~ 849 (1075)
. +..+...++..+...+.++.+..+|.+|++|++++.+..+.. +. .-|. ..+|.|+|+||+|+||++
T Consensus 412 l----Y~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~-----G~---~~p~-~~~G~IeF~~VsFaYP~R 478 (716)
T KOG0058|consen 412 L----YQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLT-----GT---LAPD-HLQGVIEFEDVSFAYPTR 478 (716)
T ss_pred H----HHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCC-----Cc---cccc-cccceEEEEEeeeecCCC
Confidence 3 334556677888888899999999999999999877655432 10 1122 358999999999999986
Q ss_pred c--ccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEEEEcCCCCCCCcch
Q 001446 850 K--LLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFYVPQRPYTCLGTL 925 (1075)
Q Consensus 850 ~--~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~~VpQdP~Lf~gTi 925 (1075)
| +||+|+||+|+|||+||+|||||+||||++++|+|||||++|+|.+||+||++++ ++|++|++|.|||+||+|||
T Consensus 479 p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI 558 (716)
T KOG0058|consen 479 PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSI 558 (716)
T ss_pred CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhcCHHHHHHHeeeeeccceeecccH
Confidence 4 6999999999999999999999999999999999999999999999999999994 57899999999999999999
Q ss_pred hhhhcCCCC--hHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHH
Q 001446 926 RDQIIYPLS--REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLG 1002 (1075)
Q Consensus 926 r~NL~~p~~--~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrla 1002 (1075)
+|||.|+.. ++|++.+|+++|++++|+ ...|+||||.+ +.|.+||||||||||
T Consensus 559 ~eNI~YG~~~~t~e~i~~AAk~ANah~FI------------------------~~~p~gY~T~VGEkG~qLSGGQKQRIA 614 (716)
T KOG0058|consen 559 RENIAYGLDNATDEEIEAAAKMANAHEFI------------------------TNFPDGYNTVVGEKGSQLSGGQKQRIA 614 (716)
T ss_pred HHHHhcCCCCCCHHHHHHHHHHhChHHHH------------------------HhCccccccccCCccccccchHHHHHH
Confidence 999999754 455556788887765544 34578899976 689999999999999
Q ss_pred HHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1003 MARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1003 iARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
|||||+|||+||||||||||||+++|..+|+.+.. .++|||+|||||+|++-.|++.++++|.
T Consensus 615 IARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~ 679 (716)
T KOG0058|consen 615 IARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGR 679 (716)
T ss_pred HHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCe
Confidence 99999999999999999999999999999998854 5899999999999999999999998775
No 10
>KOG0060 consensus Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis) [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=5.5e-72 Score=617.21 Aligned_cols=570 Identities=36% Similarity=0.620 Sum_probs=464.8
Q ss_pred hhHHhHHHhhhcccchhhhHHH-HHHHHHHHHHHHHHHHhhhhcchHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 477 LRVADMFKVLVPTVFDKQGAQL-LAVAFLVVSRTWISDRIASLNGTTVKYVLEQDKASFVRLIGVSVLQSAASSFIAPSI 555 (1075)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (1075)
.+..++++.++++......+.+ ++.++.....+...+.+....+.++.++..++...|..++..++++..+......+.
T Consensus 63 ~k~~~ilkil~p~~~~~~~~~l~l~~~~l~~~~~~~~y~~~~~~~~~y~al~~kd~~~F~~~~~~~~~~~~~~s~~~a~~ 142 (659)
T KOG0060|consen 63 QKFLQILKILFPSTFSSQTALLLLALVALTLLTTADVYMIGNIPTKFYVALINKDAELFKRLLFKYVLLIPGISLLNALL 142 (659)
T ss_pred HHHHHHHHHhccCccccHHHHHHHHHHHHHHHHHhHhheecccchhhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777888888775544433 344444444444444455556667777788888888888777777777777777788
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHHHHHHHHHHHHH
Q 001446 556 RHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDILWFTWRMKA 635 (1075)
Q Consensus 556 ~~~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~~~~~~~~~l~~ 635 (1075)
.+....+.++||+++++++++.||+...||++.+.+...+|||||+++|++.++..+..+...++.+++++++|.|+++.
T Consensus 143 ky~~~~L~Lr~R~~ltk~lh~~Y~k~~~yYkis~~d~ridNPDQrltqDv~kf~~~l~sl~s~l~~a~~di~~Y~~~l~~ 222 (659)
T KOG0060|consen 143 KFTTNELYLRFRKNLTKYLHRLYFKGFTYYKLSNLDDRIDNPDQRLTQDVEKFCRQLSSLYSNLLKAPFDLVYYTFRLFE 222 (659)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHHhccceEEEecccccccCChHHHHhHHHHHHHHHHHHHHHhhhccceeeehhhhHHhh
Confidence 88889999999999999999999999999999998888999999999999999999999999999999999999999999
Q ss_pred hhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHHHHHHHHHHHHH
Q 001446 636 LTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELLEHS 715 (1075)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~~~~~~~~~~~~ 715 (1075)
..++.+++.++.|++++..+.+.+.+++.+++.+++++|++||+.|.+++.|+|.||||++++.|.....++|++++++.
T Consensus 223 s~g~~gp~~i~~Yf~~~~vi~~~L~~pI~~l~~~qeklEGdfRy~h~rlr~NaE~iAFY~g~~~E~~~~~~~f~~Lv~~l 302 (659)
T KOG0060|consen 223 SAGWLGPVSIFAYFLIGTVINKTLRGPIVKLTVEQEKLEGDFRYKHSRLRVNAEEIAFYRGGQVEHQRTDQRFRNLVQHL 302 (659)
T ss_pred hcCcccHHHHHHHHHHHHHHHhhhccchhHHHHHHHHhhcchhhheeeeeecchhhhhhccCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHhhchhhHHHHHH-HHHHHhhcc-cchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 716 LLLLKKKWLFGILDDFVTKQLPHNVTWGLS-LLYAMEHKG-DRALVSTQGELAHALRFLASVVSQSFLAFGDILELHRKF 793 (1075)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 793 (1075)
..+...+|+.++.++++. .+...++|.++ ..+ +.+ .... .+..++...+..-+.++..++.+|+.+......+
T Consensus 303 ~~l~~~r~~l~f~~n~~~-Ylg~ilsy~vi~~p~---Fs~h~y~~-~s~aEL~~~i~~na~~~i~Li~~f~~l~~~~~~l 377 (659)
T KOG0060|consen 303 RELMSFRFWLGFIDNIFD-YLGGILSYVVIAIPF---FSGHVYDD-LSPAELSGLISNNAFVFIYLISAFGRLVDLSRDL 377 (659)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHhhheeeEEeeee---ecccccCC-cCHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhH
Confidence 998888888888877665 22222221110 001 111 0111 1244555555544555556777899999999999
Q ss_pred HHHhhhhhhHHHHHHHHhhcCCCC------------CcccCCccCcCCCCC-CCCceEEeeeeeeCCC-cccccccccee
Q 001446 794 VELSGGINRIFELEELLDAAQPGD------------DEISGSSQHKWNSTD-YQDSISFSKLDIITPS-QKLLARQLTFE 859 (1075)
Q Consensus 794 ~~~~~s~~Ri~~~~~~~~~~~~~~------------~~~~~~~~~~w~~~~-~~g~I~f~~V~~~yp~-~~~vL~~vs~~ 859 (1075)
.++++.+.||-++++...+..... .......++.|+... .+-.|+|++|++..|+ ++.+.+|+||+
T Consensus 378 s~lsGyt~Ri~el~~~l~d~~~~~~~~~~~~~~~~E~~~~l~~~~G~~~~~~~Dn~i~~e~v~l~tPt~g~~lie~Ls~~ 457 (659)
T KOG0060|consen 378 SRLSGYTHRIGELMEVLDDLSSGSQECTMEEEELGEAEWGLSLPPGSGKAEPADNAIEFEEVSLSTPTNGDLLIENLSLE 457 (659)
T ss_pred HHhhhHHHHHHHHHHHHHHhccCCcchhhhhhhhhhhhhccCCCCCCcccccccceEEeeeeeecCCCCCceeeeeeeeE
Confidence 999999999999988765433110 000011122333211 1457999999999998 55566779999
Q ss_pred ecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHH
Q 001446 860 IVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAE 939 (1075)
Q Consensus 860 I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~ 939 (1075)
|+.|+.+.|+||||||||||++.|.++|+..+|+|..+..- .-..+-||||.||+-.||+|+++.||....+..
T Consensus 458 V~~g~~LLItG~sG~GKtSLlRvlggLWp~~~G~l~k~~~~------~~~~lfflPQrPYmt~GTLRdQvIYP~~~~~~~ 531 (659)
T KOG0060|consen 458 VPSGQNLLITGPSGCGKTSLLRVLGGLWPSTGGKLTKPTDG------GPKDLFFLPQRPYMTLGTLRDQVIYPLKAEDMD 531 (659)
T ss_pred ecCCCeEEEECCCCCchhHHHHHHhcccccCCCeEEecccC------CCCceEEecCCCCccccchhheeeccCcccccc
Confidence 99999999999999999999999999999999999865431 013499999999999999999999997643311
Q ss_pred HHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccc--cccccCCChhHHHHHHHHHHhhcCCCEeEee
Q 001446 940 LRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN--LNWEDILSLGEQQRLGMARLFFHKPKFGILD 1017 (1075)
Q Consensus 940 ~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~--~~~g~~LSgGQrQrlaiARAlLr~p~ILiLD 1017 (1075)
.....|++|...|+.++|.+++++. +|+|++ .+|.+.||+||+||||+||.++++|++.|||
T Consensus 532 ---------------~~~~~d~~i~r~Le~v~L~hl~~r~-ggld~~~~~dW~dvLS~GEqQRLa~ARLfy~kPk~AiLD 595 (659)
T KOG0060|consen 532 ---------------SKSASDEDILRILENVQLGHLLERE-GGLDQQVDWDWMDVLSPGEQQRLAFARLFYHKPKFAILD 595 (659)
T ss_pred ---------------ccCCCHHHHHHHHHHhhhhhHHHHh-CCCCchhhccHHhhcCHHHHHHHHHHHHHhcCCceEEee
Confidence 1224689999999999999999987 899964 5899999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHhcCceEEEecCCCCchhhccceEEEEcCCcceEEecCC
Q 001446 1018 ECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGEGNWELRTIS 1074 (1075)
Q Consensus 1018 EATSalD~~~e~~i~~~~~~~~~TvI~IaHRls~i~~~~~~l~l~~g~g~~~~~~~~ 1074 (1075)
|||||+|.+.|.++++.+++.|.|.|+|.||.++++|||.+|.+ ||.|+|+|+.|+
T Consensus 596 E~TSAv~~dvE~~~Yr~~r~~giT~iSVgHRkSL~kfHd~~L~~-~g~g~w~~~~I~ 651 (659)
T KOG0060|consen 596 ECTSAVTEDVEGALYRKCREMGITFISVGHRKSLWKFHDYVLRM-DGRGSWRFHQID 651 (659)
T ss_pred chhhhccHHHHHHHHHHHHHcCCeEEEeccHHHHHhhhhEEEEe-cCCCceEEEEec
Confidence 99999999999999999999999999999999999999999999 899999999886
No 11
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=4.9e-66 Score=584.44 Aligned_cols=198 Identities=32% Similarity=0.399 Sum_probs=164.7
Q ss_pred cEEEEeEEEEcCCC---CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCC----ccEEEeCCcC------c-
Q 001446 181 YIEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV----SGHIAKPGVG------S- 246 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~---~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~----~G~i~~~~~~------~- 246 (1075)
.++++|+++.|... .++++|+||++.+||+++|+|+|||||||+.++|+|+.++. +|+|.++|.+ .
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 68999999987532 26999999999999999999999999999999999999988 8999999974 1
Q ss_pred --c-ccccEEEEcCCCCC---CcCCHHHHhcCCCCCCc-ccCcCCHHHHHHHHHHcCChhHHhc--CCCCcccCCCCCCC
Q 001446 247 --D-LNKEIFYVPQRPYT---AVGTLRDQLIYPLTSDQ-EVEPLTHGGMVELLKNVDLEYLLDR--YPPEKEINWGDELS 317 (1075)
Q Consensus 247 --~-~~~~i~~v~Q~~~~---~~~tv~~ni~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~--~~~~~~~~~g~~LS 317 (1075)
. ..++|+|+||+|.- +..||.++|.-...... .......+++.++++.++|.+-..+ +| ++||
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~~~yP--------heLS 156 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERRDRYP--------HQLS 156 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhhccCC--------cccC
Confidence 1 23679999999952 23588887764221111 0122345677889999999876554 88 7999
Q ss_pred hhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 318 LGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 318 gGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
||||||+.||+||+.+|++||+||||++||+.+..+|++.+++ .|+++|+||||+..+. .||+|++|.+
T Consensus 157 GG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~ 230 (539)
T COG1123 157 GGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYK 230 (539)
T ss_pred chHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEEC
Confidence 9999999999999999999999999999999999999888753 5999999999999985 6999999986
No 12
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.5e-65 Score=615.54 Aligned_cols=456 Identities=20% Similarity=0.265 Sum_probs=320.8
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhcc-CCceEEEecCCCCCCCCcchhHHHHHHHHHHHHH-------HhhhhhHh
Q 001446 551 IAPSIRHLTARLALGWRIRMTQHLLKSYLR-KNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSG-------LVTGMVKP 622 (1075)
Q Consensus 551 ~~~~~~~~~~~~~~~~r~~l~~~ll~~~l~-~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~-------~~~~~i~~ 622 (1075)
....+.+...+...+.|.... +++|| +..|||... .+++..|++.|++.+.+.+.. .+..++.+
T Consensus 91 q~~c~~~~geRq~~riR~~yl----~~iLrQdi~~fD~~~----~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g 162 (1228)
T KOG0055|consen 91 QVSCWMRTGERQTARIRSKYL----KAILRQDIGWFDTNS----TGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAG 162 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHHHhCccceeeccc----ccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445556666666665444 44444 458888433 267888999999887665433 33445556
Q ss_pred HHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHH
Q 001446 623 SVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKA 702 (1075)
Q Consensus 623 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~ 702 (1075)
++..+++.|+|+++.... ..+.++.+..+.+. +...+.+++...+.--...++..+..+|+.+|++++.|..
T Consensus 163 ~ii~F~~~W~Ltlv~l~~----~Pli~~~g~~~a~~----~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ 234 (1228)
T KOG0055|consen 163 FVIGFYYGWKLTLVMLSF----IPLIAIAGGLLARF----LSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIE 234 (1228)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHH
Confidence 666688899998774221 11112222222222 2233444444333344556777778899999999887754
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHHHHH
Q 001446 703 MIESRFRELLEHSLLLL-KKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFL 781 (1075)
Q Consensus 703 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~ 781 (1075)
+|.+.++...+.. ++..+.++...+ ..+.....|++++||+..+..... .+.|.+...+ ..+.....
T Consensus 235 ----ry~~~L~~~~k~gi~~g~~~G~~~G~--~~~~~~~~~a~~~WyG~~li~~~~--~~~g~v~~v~----~~vl~g~~ 302 (1228)
T KOG0055|consen 235 ----RYSKALENALKFGIKKGLFKGLGLGF--TFFLLFASYALAFWYGSTLILNGG--YNGGDVITVF----FSVLIGGM 302 (1228)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHhHH--HHHHHHHHHHHHHHHHHHHHhcCC--CCCceEEEEE----eehhhhhh
Confidence 4555555544433 333333332211 123345567888888844321100 0111110000 01111234
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCCcc--cccccccee
Q 001446 782 AFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQK--LLARQLTFE 859 (1075)
Q Consensus 782 ~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~~--~vL~~vs~~ 859 (1075)
++++.......+....+++.+|++.++..+..++.. ..+ -+....+|.|+|+||+|+||++| ++|+|+||+
T Consensus 303 sLgqa~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~--~~~-----~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~ 375 (1228)
T KOG0055|consen 303 SLGQASPHLSAFAKARAAAYRIFETIDRKPSIDPYS--KGG-----RVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLK 375 (1228)
T ss_pred hhhccccchHHHhccccchHHHHHHhcCCCCCCccc--ccC-----CcccccccceEEEEEEecCCCCCcchhhCCeEEE
Confidence 556666666777888899999999887665443321 111 12234589999999999999865 799999999
Q ss_pred ecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhhhhcCCC--Ch
Q 001446 860 IVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPL--SR 935 (1075)
Q Consensus 860 I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~NL~~p~--~~ 935 (1075)
|++||+|||||+|||||||++++|+|||||++|+|.|||.|++.+ +++|++|++|.|||+||++||+|||.|+. .+
T Consensus 376 i~~G~~valVG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat 455 (1228)
T KOG0055|consen 376 IPSGQTVALVGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDAT 455 (1228)
T ss_pred eCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCccc
Confidence 999999999999999999999999999999999999999999987 67899999999999999999999999954 34
Q ss_pred HHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEe
Q 001446 936 EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFG 1014 (1075)
Q Consensus 936 ~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~IL 1014 (1075)
.+++.+|+|+++. ++++..+|+||||.+ +.|.+|||||||||||||||+|+|+||
T Consensus 456 ~~~i~~a~k~ana------------------------~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~IL 511 (1228)
T KOG0055|consen 456 REEIEEAAKAANA------------------------HDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKIL 511 (1228)
T ss_pred HHHHHHHHHHccH------------------------HHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEE
Confidence 5555566665554 345556688999976 678899999999999999999999999
Q ss_pred EeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1015 ILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1015 iLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
||||||||||+++|+.+|+++.. .|+|+|+|||||++++.+|.++++++|.
T Consensus 512 LLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~ 564 (1228)
T KOG0055|consen 512 LLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGK 564 (1228)
T ss_pred EecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCE
Confidence 99999999999999999998864 6999999999999999999999998886
No 13
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=8.6e-63 Score=564.92 Aligned_cols=519 Identities=27% Similarity=0.426 Sum_probs=411.3
Q ss_pred HHHHHHHHHhhhhcchHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccCCceE
Q 001446 506 VSRTWISDRIASLNGTTVKYVLEQDKASFVRLIGVSVLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKNSFY 585 (1075)
Q Consensus 506 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~ll~~~l~~~~~~ 585 (1075)
+.....+.+++.+++.+++++...|...|+..+.++...++....+.....++...+..+||++|+++++..||++..||
T Consensus 57 l~~v~~~v~~~~w~~~~~~aL~~~d~~~f~~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y 136 (604)
T COG4178 57 LLSVRGQVLLNDWNGPFYNALARRDLAAFWQQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYY 136 (604)
T ss_pred HHHhheeeeeHhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchH
Confidence 33344555666667788888888888888888887777777776777778889999999999999999999999999999
Q ss_pred EEecCC--CCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHHHHHHHHHHHHHhhch--------------hhHHHHHHHH
Q 001446 586 KVFNMS--SKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDILWFTWRMKALTGQ--------------RGVAILYAYM 649 (1075)
Q Consensus 586 ~~~~~~--~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~~~~~~~~~l~~~~~~--------------~~~~~~~~~~ 649 (1075)
+..... ...+|||||+++|+..+.+....+..+++.++++++.|+..||-+++. ..+.+++.|+
T Consensus 137 ~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya 216 (604)
T COG4178 137 RLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYA 216 (604)
T ss_pred HHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHH
Confidence 877665 455899999999999999999999999999999999999888855442 1233455666
Q ss_pred HHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhH
Q 001446 650 LLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELLEHSLLLLKKKWLFGILD 729 (1075)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (1075)
+.+......+++++.+++.+++++|+.||+.+.++++++|.|++|+||+.|+..+..+|....++...+..+...+..+.
T Consensus 217 ~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~ 296 (604)
T COG4178 217 ISASLLTHLIGRPLIRLNFERQKLEADFRYSLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQ 296 (604)
T ss_pred HHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhh
Confidence 66666777889999999999999999999999999999999999999999999999999999988766554333222221
Q ss_pred HHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHH
Q 001446 730 DFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEEL 809 (1075)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~ 809 (1075)
.... .+...+++..+.. ..+.|. ...|. ++.....+++...+++++...++.+++..+...|+.++.+.
T Consensus 297 ~gy~-~~s~v~P~li~ap--~~f~g~----i~~G~----lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~a 365 (604)
T COG4178 297 LGYG-WLSVVLPILIAAP--RYFSGQ----ITFGG----LMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQA 365 (604)
T ss_pred hhhh-HHHHHHHHHhccH--hhhcCc----ChHHH----HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 1111 1111111111100 001111 11222 22233455667778899999999999999999999999877
Q ss_pred HhhcCCCCCcccCC-ccCcCCCCCCCCceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCC
Q 001446 810 LDAAQPGDDEISGS-SQHKWNSTDYQDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP 888 (1075)
Q Consensus 810 ~~~~~~~~~~~~~~-~~~~w~~~~~~g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~ 888 (1075)
.+..+.+....... ....-.... +..|+|+|++...|++.+.|+++||.|+|||++.|.|+||||||||+++|.|+||
T Consensus 366 i~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~nl~l~~p~~~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP 444 (604)
T COG4178 366 LEAAQMDTEKPARTGRRIDFDDNA-DHGITLENLSLRTPDGQTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWP 444 (604)
T ss_pred HHhccCcccccCcccccccccccc-cceeEEeeeeEECCCCCeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCc
Confidence 65332211100000 000000111 4689999999999998899999999999999999999999999999999999999
Q ss_pred CCCCeEecCCCCCccccCCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHH
Q 001446 889 VVSGSLTKPSQHIDEEAGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILE 968 (1075)
Q Consensus 889 ~~sG~I~idg~di~~~~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~ 968 (1075)
..+|+|.++.. .++.|+||+||+..||+||.|+||.+.+ ...|+++.++|.
T Consensus 445 ~g~G~I~~P~~---------~~~lflpQ~PY~p~GtLre~l~YP~~~~--------------------~~~d~~l~~vL~ 495 (604)
T COG4178 445 WGSGRISMPAD---------SALLFLPQRPYLPQGTLREALCYPNAAP--------------------DFSDAELVAVLH 495 (604)
T ss_pred cCCCceecCCC---------CceEEecCCCCCCCccHHHHHhCCCCCC--------------------CCChHHHHHHHH
Confidence 99999998843 4689999999999999999999997642 256889999999
Q ss_pred hCCchhhhhhhccCCccccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEec
Q 001446 969 GVRLSYLLEREEVGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSS 1046 (1075)
Q Consensus 969 ~~~L~~~i~~~~~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~Ia 1046 (1075)
+|+|.++++++ |....|...||+|||||||+||++|++||+++|||||||||.++|..+++++++ +++|+|.|+
T Consensus 496 ~vgL~~L~~rl----~~~~~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~l~~~lp~~tvISV~ 571 (604)
T COG4178 496 KVGLGDLAERL----DEEDRWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQLLKEELPDATVISVG 571 (604)
T ss_pred HcCcHHHHHHH----hccCcHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHHHHhhCCCCEEEEec
Confidence 99999999886 555679999999999999999999999999999999999999999999999987 799999999
Q ss_pred CCCCchhhccceEEEEcCCcceEE
Q 001446 1047 QRPALIPFHSLELRLIDGEGNWEL 1070 (1075)
Q Consensus 1047 HRls~i~~~~~~l~l~~g~g~~~~ 1070 (1075)
||.+...||++.|.+ .++|+|.-
T Consensus 572 Hr~tl~~~h~~~l~l-~~~~~~~~ 594 (604)
T COG4178 572 HRPTLWNFHSRQLEL-LDDAGGQN 594 (604)
T ss_pred cchhhHHHHhhheee-cccccccc
Confidence 999999999999999 57777744
No 14
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=1e-61 Score=592.69 Aligned_cols=566 Identities=37% Similarity=0.635 Sum_probs=419.2
Q ss_pred hHHhHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 478 RVADMFKVLVPTVFDKQGAQLLAVAFLVVSRTWISDRIASLNGTTVKYVLEQDKASFVRLIGVSVLQSAASSFIAPSIRH 557 (1075)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (1075)
++..++++..+++.++..+.++..++..+...+++..+..+.+...+.....+...+...+..+++..++..+...+..+
T Consensus 78 ~~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~ 157 (659)
T TIGR00954 78 KLDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKY 157 (659)
T ss_pred HHHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666666665444444444444555555666666666665555555555544544444444445555566666777
Q ss_pred HHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHHHHHHHHHHHHHhh
Q 001446 558 LTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDILWFTWRMKALT 637 (1075)
Q Consensus 558 ~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~~~~~~~~~l~~~~ 637 (1075)
+..++...+|.+++.++++.+++...+|++...+...+++++|+++|++.+...+...+..++.++++++++.+.++...
T Consensus 158 ~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~ 237 (659)
T TIGR00954 158 LLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDSRIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTAL 237 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 78888889999999999999999888888665555679999999999999999999999999998888887777776533
Q ss_pred chhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHHHHHHHHHHHHHHH
Q 001446 638 GQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELLEHSLL 717 (1075)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~~~~~~~~~~~~~~ 717 (1075)
.+....++++++++.....+.+.+++.....+.++.++.++..+.+...+.++|++|++++.|.+.+.+.+.++.+...+
T Consensus 238 ~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~ 317 (659)
T TIGR00954 238 GSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNL 317 (659)
T ss_pred chHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 44444455556666667778888999999999999999999999999999999999999999999999999998888776
Q ss_pred HHHHHHHhhhhHHHHHhhchhhHHH-HHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 718 LLKKKWLFGILDDFVTKQLPHNVTW-GLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDILELHRKFVEL 796 (1075)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1075)
......++..+..++.......+.+ +++..+.. ..+......+.|.+...+......+..++.+++.+.....++.++
T Consensus 318 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~-~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~ 396 (659)
T TIGR00954 318 IIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFD-KTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRL 396 (659)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655555555544443211111111 11111110 000000001123322212222223445677889999999999999
Q ss_pred hhhhhhHHHHHHHHhhcCCCC----Cccc--C------CccCcCC---CCCCCCceEEeeeeeeCCCccccccccceeec
Q 001446 797 SGGINRIFELEELLDAAQPGD----DEIS--G------SSQHKWN---STDYQDSISFSKLDIITPSQKLLARQLTFEIV 861 (1075)
Q Consensus 797 ~~s~~Ri~~~~~~~~~~~~~~----~~~~--~------~~~~~w~---~~~~~g~I~f~~V~~~yp~~~~vL~~vs~~I~ 861 (1075)
.++.+||.++.+.+++.+... .... . ..+..++ .....+.|+|+||+++||+++++|+|+||+|+
T Consensus 397 ~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~~~il~~isl~i~ 476 (659)
T TIGR00954 397 AGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNGDVLIESLSFEVP 476 (659)
T ss_pred HHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCCCeeeecceEEEC
Confidence 999999999998765432110 0000 0 0000010 01124679999999999876689999999999
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHH
Q 001446 862 PGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELR 941 (1075)
Q Consensus 862 ~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~ 941 (1075)
+||+++|+||||||||||+++|.|+|+|.+|+|.+|+ |.++++|||+|++|++|++|||.||....+.
T Consensus 477 ~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~---------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~--- 544 (659)
T TIGR00954 477 SGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA---------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDM--- 544 (659)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC---------CCcEEEECCCCCCCCcCHHHHHhcCCChhhh---
Confidence 9999999999999999999999999999999999875 4579999999999999999999987532110
Q ss_pred HhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCC
Q 001446 942 ALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTN 1021 (1075)
Q Consensus 942 a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATS 1021 (1075)
..+...++++.++++.+++.+++++ |.|+|+..+|+.+||||||||++||||++++|++||||||||
T Consensus 545 ------------~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~~~~~LSgGqkQRl~iARal~~~p~illLDEpts 611 (659)
T TIGR00954 545 ------------KRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQDWMDVLSGGEKQRIAMARLFYHKPQFAILDECTS 611 (659)
T ss_pred ------------hccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccccccCCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 0011245678889999999988877 789999988889999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCceEEEecCCCCchhhccceEEEEcCCcceEE
Q 001446 1022 ATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGEGNWEL 1070 (1075)
Q Consensus 1022 alD~~~e~~i~~~~~~~~~TvI~IaHRls~i~~~~~~l~l~~g~g~~~~ 1070 (1075)
+||.++++.+++.+++.++|+|+|+||++++++||+++++ +|+|+|+|
T Consensus 612 ~LD~~~~~~l~~~l~~~~~tvI~isH~~~~~~~~d~il~l-~~~g~~~~ 659 (659)
T TIGR00954 612 AVSVDVEGYMYRLCREFGITLFSVSHRKSLWKYHEYLLYM-DGRGGYQF 659 (659)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEEeCchHHHHhCCEEEEE-eCCCCccC
Confidence 9999999999998877799999999999999999999999 79999986
No 15
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-64 Score=601.80 Aligned_cols=197 Identities=24% Similarity=0.317 Sum_probs=166.5
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCC--CccEEEeCCcCc-------ccccc
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL--VSGHIAKPGVGS-------DLNKE 251 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~--~~G~i~~~~~~~-------~~~~~ 251 (1075)
.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+|+|+|+++| ++|+|.++|.+. ..++.
T Consensus 5 ~l~~~nl~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 83 (506)
T PRK13549 5 LLEMKNITKTFG-GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERAG 83 (506)
T ss_pred eEEEeeeEEEeC-CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHCC
Confidence 689999999995 46899999999999999999999999999999999999996 899999998641 12467
Q ss_pred EEEEcCCCCCCc-CCHHHHhcCCCCCC--cc-cCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHH
Q 001446 252 IFYVPQRPYTAV-GTLRDQLIYPLTSD--QE-VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 327 (1075)
Q Consensus 252 i~~v~Q~~~~~~-~tv~~ni~~~~~~~--~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lA 327 (1075)
++||||+|.++. .|++||+.++.... .. ......+++.++++.+++.+..++.+ .+||||||||++||
T Consensus 84 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgGqkqrv~la 155 (506)
T PRK13549 84 IAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV--------GNLGLGQQQLVEIA 155 (506)
T ss_pred eEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch--------hhCCHHHHHHHHHH
Confidence 999999997765 59999998875321 00 01112345778899999987766655 68999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 328 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 328 ral~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|||+.+|+++||||||++||+.....+.+.+++ .|+|+|++|||++.+. .||++++|++
T Consensus 156 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~ 218 (506)
T PRK13549 156 KALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRD 218 (506)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEEC
Confidence 999999999999999999999999999887754 4889999999999875 6999999985
No 16
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=8.6e-63 Score=590.63 Aligned_cols=461 Identities=20% Similarity=0.287 Sum_probs=319.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHH-
Q 001446 546 AASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSV- 624 (1075)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~- 624 (1075)
+...+..+.+.++..++-..+..++++|+++. +..||. ....+++.+|+ +|++.+...+...+..++..++
T Consensus 209 ~l~~lr~~~~~~~~~rld~~l~~~~~~hll~L---pl~~f~----~r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~ 280 (709)
T COG2274 209 LLRLLRTYLIAHLGKRLDLELSGRFFRHLLRL---PLSYFE----KRSVGEIISRV-RELEQIREFLTGSILTLIIDLLF 280 (709)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcC---cHHHcc----CCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444556666667777777777777777763 224443 23345566665 5666666666554444332222
Q ss_pred ------HHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcH
Q 001446 625 ------DILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGA 698 (1075)
Q Consensus 625 ------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~ 698 (1075)
.+++++|.|+++. ++.+.+++++...+ .|.+.+.+.+.-...+.-.....+...+.++++..+.|.
T Consensus 281 ~~i~l~vm~~ys~~L~li~----l~~~~l~~l~~~~~----~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~ 352 (709)
T COG2274 281 ALIFLAVMFLYSWKLTLIV----LAAIPLNVLITLIF----QPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEP 352 (709)
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhH
Confidence 2345677776553 12222222222222 222233333333333333344455666789999998877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHH
Q 001446 699 REKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQ 778 (1075)
Q Consensus 699 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~ 778 (1075)
+-....++.+.+..+...+.....-....+..++. .+...+.+|++........ .+.|.+ ..+.+....
T Consensus 353 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~l~~v~iL~~G~~lVl~~~--lTlG~L----iAf~~l~~~ 421 (709)
T COG2274 353 RFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQ-----QLSSVLILWFGAILVLEGE--LTLGQL----VAFNMLAGY 421 (709)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhcCC--cchHHH----HHHHHHHHH
Confidence 76666666776666654443332222232222332 2222334444433221111 112222 222334455
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCCc-cccccccc
Q 001446 779 SFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQ-KLLARQLT 857 (1075)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~-~~vL~~vs 857 (1075)
...++..+.+...+++++..+.+|+.++.+.+++.+.+.. +.+.| ..+|+|+|+||+|+|+.+ +++|+|+|
T Consensus 422 f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~~-----~~~~~---~~~g~I~~~nvsf~y~~~~~~vL~~is 493 (709)
T COG2274 422 FISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDKT-----LIHLP---KLQGEIEFENVSFRYGPDDPPVLEDLS 493 (709)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc-----ccccc---ccCceEEEEEEEEEeCCCCcchhhcee
Confidence 6678889999999999999999999999887655432210 11122 247999999999998764 67999999
Q ss_pred eeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhhhhcCC--C
Q 001446 858 FEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYP--L 933 (1075)
Q Consensus 858 ~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~NL~~p--~ 933 (1075)
|+|+|||+|||||+||||||||+++|.|+|+|++|+|.+||+|+.++ ..+|++|++|||||+||+|||||||... .
T Consensus 494 L~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~ 573 (709)
T COG2274 494 LEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPE 573 (709)
T ss_pred EEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999998 4589999999999999999999999863 3
Q ss_pred ChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCC
Q 001446 934 SREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPK 1012 (1075)
Q Consensus 934 ~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ 1012 (1075)
..+|++++||+.++ .++++.++|.||||.+ +.|.+|||||||||+||||++++|+
T Consensus 574 ~~~e~i~~A~~~ag------------------------~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~P~ 629 (709)
T COG2274 574 ATDEEIIEAAQLAG------------------------AHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSKPK 629 (709)
T ss_pred CCHHHHHHHHHHhC------------------------cHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhccCCC
Confidence 34445555555554 4455666789999986 6889999999999999999999999
Q ss_pred EeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1013 FGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1013 ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
||||||||||||.++|+.+.+.+.+ .++|+|+||||+++++.+|+++++++|.
T Consensus 630 ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gk 684 (709)
T COG2274 630 ILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGK 684 (709)
T ss_pred EEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCc
Confidence 9999999999999999999887765 4799999999999999999999998775
No 17
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-63 Score=607.77 Aligned_cols=199 Identities=23% Similarity=0.299 Sum_probs=164.1
Q ss_pred ccEEEEeEEEEcCC---CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----------
Q 001446 180 NYIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----------- 245 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~---~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~----------- 245 (1075)
..|+++|+++.|++ +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|..
T Consensus 11 ~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~ 90 (623)
T PRK10261 11 DVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIEL 90 (623)
T ss_pred ceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEecccccccccc
Confidence 47999999999963 2479999999999999999999999999999999999999999999987731
Q ss_pred ---c-----cc-cccEEEEcCCC--CCCc-CCHHHHhcCCCCCC-cccCcCCHHHHHHHHHHcCCh---hHHhcCCCCcc
Q 001446 246 ---S-----DL-NKEIFYVPQRP--YTAV-GTLRDQLIYPLTSD-QEVEPLTHGGMVELLKNVDLE---YLLDRYPPEKE 309 (1075)
Q Consensus 246 ---~-----~~-~~~i~~v~Q~~--~~~~-~tv~~ni~~~~~~~-~~~~~~~~~~~~~~l~~~~l~---~~~~~~~~~~~ 309 (1075)
. .+ +++|+||+|+| .++. .||.||+.++.... ........+++.++++.++|. +..++.|
T Consensus 91 ~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~---- 166 (623)
T PRK10261 91 SEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEAQTILSRYP---- 166 (623)
T ss_pred ccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChhhHHhCCC----
Confidence 0 11 24799999998 3444 69999998763211 111111235677899999995 3466666
Q ss_pred cCCCCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEE
Q 001446 310 INWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSL 384 (1075)
Q Consensus 310 ~~~g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l 384 (1075)
.+|||||||||+|||||+.+|++|||||||++||+.+...+.+.+++ .|+|+|+||||++.+ ..||+|++|
T Consensus 167 ----~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl 242 (623)
T PRK10261 167 ----HQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVM 242 (623)
T ss_pred ----ccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEe
Confidence 68999999999999999999999999999999999999988877653 389999999999987 579999999
Q ss_pred cC
Q 001446 385 DG 386 (1075)
Q Consensus 385 ~~ 386 (1075)
++
T Consensus 243 ~~ 244 (623)
T PRK10261 243 YQ 244 (623)
T ss_pred eC
Confidence 85
No 18
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-63 Score=593.75 Aligned_cols=197 Identities=24% Similarity=0.247 Sum_probs=166.3
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc-------cccccEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIF 253 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~-------~~~~~i~ 253 (1075)
.++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|.+. ..++.++
T Consensus 5 ~l~~~~l~~~~~-~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~ 83 (510)
T PRK09700 5 YISMAGIGKSFG-PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGIG 83 (510)
T ss_pred eEEEeeeEEEcC-CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCeE
Confidence 689999999995 46799999999999999999999999999999999999999999999998541 1235699
Q ss_pred EEcCCCCCCc-CCHHHHhcCCCCCC----cc---cCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHH
Q 001446 254 YVPQRPYTAV-GTLRDQLIYPLTSD----QE---VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLG 325 (1075)
Q Consensus 254 ~v~Q~~~~~~-~tv~~ni~~~~~~~----~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~ 325 (1075)
|+||++.++. .|++||+.++.... .. ......+++.++++.+++.+..++.+ .+||||||||++
T Consensus 84 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgG~~qrv~ 155 (510)
T PRK09700 84 IIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV--------ANLSISHKQMLE 155 (510)
T ss_pred EEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch--------hhCCHHHHHHHH
Confidence 9999987765 49999998764211 00 00112345678899999987777665 689999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 326 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 326 lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|||||+.+|+++||||||++||+.+...+.+.+++ .|+|+|+||||++.+. .||++++|++
T Consensus 156 ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~ 220 (510)
T PRK09700 156 IAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKD 220 (510)
T ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999887754 4899999999999875 7999999985
No 19
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=3.2e-63 Score=592.74 Aligned_cols=197 Identities=25% Similarity=0.352 Sum_probs=166.5
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc------c-ccccEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D-LNKEIF 253 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~-~~~~i~ 253 (1075)
.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .++.++
T Consensus 4 ~i~~~~l~~~~~-~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 82 (501)
T PRK10762 4 LLQLKGIDKAFP-GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGIG 82 (501)
T ss_pred eEEEeeeEEEeC-CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCEE
Confidence 589999999995 46799999999999999999999999999999999999999999999998541 1 245799
Q ss_pred EEcCCCCCCc-CCHHHHhcCCCCCCcc---c-CcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHH
Q 001446 254 YVPQRPYTAV-GTLRDQLIYPLTSDQE---V-EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMAR 328 (1075)
Q Consensus 254 ~v~Q~~~~~~-~tv~~ni~~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAr 328 (1075)
|+||++.++. .|++||+.++...... . .....+++.++++.+++.+..++.+ .+||||||||++|||
T Consensus 83 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~la~ 154 (501)
T PRK10762 83 IIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV--------GELSIGEQQMVEIAK 154 (501)
T ss_pred EEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch--------hhCCHHHHHHHHHHH
Confidence 9999987765 5999999886432110 0 0111345678899999987777655 689999999999999
Q ss_pred HHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 329 LFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 329 al~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
||+.+|++|||||||++||+.+...+.+.+++ .|+|+|++|||++.+. .||++++|++
T Consensus 155 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~ 216 (501)
T PRK10762 155 VLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRD 216 (501)
T ss_pred HHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 99999999999999999999999999877653 4889999999999874 7999999975
No 20
>KOG0064 consensus Peroxisomal long-chain acyl-CoA transporter, ABC superfamily [Lipid transport and metabolism]
Probab=100.00 E-value=4.7e-62 Score=529.15 Aligned_cols=567 Identities=35% Similarity=0.623 Sum_probs=459.5
Q ss_pred hHHhHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 478 RVADMFKVLVPTVFDKQGAQLLAVAFLVVSRTWISDRIASLNGTTVKYVLEQDKASFVRLIGVSVLQSAASSFIAPSIRH 557 (1075)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (1075)
++.-+++..++..++...+++....+.+.+++|++..++.+.|.....+..++...|.+.++-+++.++..++++...++
T Consensus 100 ~l~~L~Kilip~vfc~e~gll~~hs~~Li~RTfLSl~VA~LdGqlVk~Ivrk~~r~F~~~LlkW~liaiPAtFvNS~Iry 179 (728)
T KOG0064|consen 100 RLNVLSKILIPTVFCKETGLLTAQSFFLISRTFLSLFVAKLDGQLVKNIVRKRGRQFLWDLLKWFLIAIPASFVNSAIRY 179 (728)
T ss_pred HHHHHHHHhcchHHHHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHhhhccHHHHHHHHHH
Confidence 45556778888888877888888888889999999999999999888888888888877777777888888888889999
Q ss_pred HHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHHHHHHHHHHHHHhh
Q 001446 558 LTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDILWFTWRMKALT 637 (1075)
Q Consensus 558 ~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~~~~~~~~~l~~~~ 637 (1075)
+...+++.+|.++.+|+.+.||.+..||++.|..+..-|+||++++|+..+.+..+.+...+..+++.++.++..|.-..
T Consensus 180 le~klaLafrtrL~~h~y~~Y~snqTyY~Vsn~d~~i~n~D~sLTeDI~~Fs~svahLysnLtKP~lDl~l~s~~L~~s~ 259 (728)
T KOG0064|consen 180 LESKLALAFRTRLTRHAYDMYLSNQTFYKVSNLDSVIENADNSLTEDIAKFSDSVAHLYSNLTKPVLDLILISFTLLDSA 259 (728)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCceEEEecccchhcCccchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988887775443
Q ss_pred chh---hHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHHHHHHHHHHHH
Q 001446 638 GQR---GVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELLEH 714 (1075)
Q Consensus 638 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~~~~~~~~~~~ 714 (1075)
... +..++...+.+...+++.++|+|+++..++.+.++.+|+.|.++.++.|.||+|+|.++|.......|..+.+.
T Consensus 260 ~s~g~~~~~~~~lvv~lTa~iLr~~sP~Fg~Lv~eeA~r~g~lr~~Hs~ii~NsEEIAfy~GhkvE~~ql~~sy~~L~~q 339 (728)
T KOG0064|consen 260 TSVGAAGITLAGLVVYLTAFILRAVSPKFGKLVAEEAARKGYLRYLHSNIITNSEEIAFYGGHKVELTQVDESYNRLVEQ 339 (728)
T ss_pred ccccccchhhhhhHHHHHHHHHHHhCCchhhHHHHHHhhccHHHHHHHHHhccHHHHHhhcccHHHHHHHHHHHHHHHHH
Confidence 322 23344555566677899999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhhhhHHHHHhhchhhHHHHH-HHH--HHHhhcccc-----hhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 715 SLLLLKKKWLFGILDDFVTKQLPHNVTWGL-SLL--YAMEHKGDR-----ALVSTQGELAHALRFLASVVSQSFLAFGDI 786 (1075)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~-----~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~ 786 (1075)
.....+.+.|+.++..|+............ ++. .+....... ..++...++..+-+. +.....++..+
T Consensus 340 m~li~k~r~~YiMleqF~mKYvWsg~GlvmvsiPI~~~t~~s~~~~~~~e~~~srt~~f~t~r~L----L~saAdAieRl 415 (728)
T KOG0064|consen 340 MNLIFKVRLWYIMLEQFVMKYTWSGTGLVMVSIPILTSTLASEGTLQLSEEGNSRTKEFITNRRL----LLSAADAIERL 415 (728)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeeeecccCCCCcccccccchhHHHHHHHHHHH----HHHHHHHHHHH
Confidence 777778888888888887755432211100 000 000000000 011111122222211 22345577888
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcc-------------cCCccCcCCC---CCCCCceEEeeeeeeCCCcc
Q 001446 787 LELHRKFVELSGGINRIFELEELLDAAQPGDDEI-------------SGSSQHKWNS---TDYQDSISFSKLDIITPSQK 850 (1075)
Q Consensus 787 ~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~-------------~~~~~~~w~~---~~~~g~I~f~~V~~~yp~~~ 850 (1075)
+..+.+++++.+...|+.++.+...+........ +.....+.|. ......|.++||..-.|+..
T Consensus 416 MssyKeItqLaGyt~Rv~~mf~v~~dv~~g~~~k~~v~e~~~~~~~~e~r~s~~l~~~~~i~~~~gI~lenIpvItP~~~ 495 (728)
T KOG0064|consen 416 MSSYKEITQLAGYTNRVFTMFSVLHDVHKGNYNKTAVPEILSSRTIDESRNSNPLPTTDAIRNFNGIILENIPVITPAGD 495 (728)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhcccccccccCchhhccCccccccCCcCCccchhhcccceEEecCceeccCcc
Confidence 8999999999999999998766555433221100 0000000000 01234599999999999988
Q ss_pred ccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEcCCCCCCCcchhhhhc
Q 001446 851 LLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQRPYTCLGTLRDQII 930 (1075)
Q Consensus 851 ~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~VpQdP~Lf~gTir~NL~ 930 (1075)
.|...+||.|+||..+.|.||+|||||||++.|.|+||...|...++-. .+|.||||.||+--||+||++.
T Consensus 496 vvv~~Ltf~i~~G~hLLItGPNGCGKSSLfRILggLWPvy~g~L~~P~~---------~~mFYIPQRPYms~gtlRDQII 566 (728)
T KOG0064|consen 496 VLVPKLTFQIEPGMHLLITGPNGCGKSSLFRILGGLWPVYNGLLSIPRP---------NNIFYIPQRPYMSGGTLRDQII 566 (728)
T ss_pred eeecceeEEecCCceEEEECCCCccHHHHHHHHhccCcccCCeeecCCC---------cceEeccCCCccCcCcccceee
Confidence 8999999999999999999999999999999999999999999987754 5699999999999999999999
Q ss_pred CCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCChhHHHHHHHHHHhhcC
Q 001446 931 YPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSLGEQQRLGMARLFFHK 1010 (1075)
Q Consensus 931 ~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSgGQrQrlaiARAlLr~ 1010 (1075)
||++.++-. .....|.++..+|.-|+|.++.++. +|+|...+|-+.||||||||+++||.+.++
T Consensus 567 YPdS~e~~~---------------~kg~~d~dL~~iL~~v~L~~i~qr~-~g~da~~dWkd~LsgGekQR~~mARm~yHr 630 (728)
T KOG0064|consen 567 YPDSSEQMK---------------RKGYTDQDLEAILDIVHLEHILQRE-GGWDAVRDWKDVLSGGEKQRMGMARMFYHR 630 (728)
T ss_pred cCCcHHHHH---------------hcCCCHHHHHHHHHHhhHHHHHHhc-cChhhhccHHhhccchHHHHHHHHHHHhcC
Confidence 998765421 1246789999999999999888875 889999999999999999999999999999
Q ss_pred CCEeEeeccCCCCCHHHHHHHHHHHHhcCceEEEecCCCCchhhccceEEEEcCCcceEEecCC
Q 001446 1011 PKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGEGNWELRTIS 1074 (1075)
Q Consensus 1011 p~ILiLDEATSalD~~~e~~i~~~~~~~~~TvI~IaHRls~i~~~~~~l~l~~g~g~~~~~~~~ 1074 (1075)
|+..+|||||||+..|.|..|.+.++..|.+.|+|+||.++++||.+.|.+ ||+|+|.+.+..
T Consensus 631 PkyalLDEcTsAvsidvE~~i~~~ak~~gi~llsithrpslwk~h~~ll~~-dg~g~~q~~~ln 693 (728)
T KOG0064|consen 631 PKYALLDECTSAVSIDVEGKIFQAAKDAGISLLSITHRPSLWKYHTHLLEF-DGEGGWQFRALN 693 (728)
T ss_pred cchhhhhhhhcccccchHHHHHHHHHhcCceEEEeecCccHHHHHHHHHhc-cCCCCeeeccCC
Confidence 999999999999999999999999988999999999999999999999999 999999997653
No 21
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=3.2e-63 Score=596.75 Aligned_cols=198 Identities=26% Similarity=0.378 Sum_probs=162.8
Q ss_pred cEEEEeEEEEcCC---CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCC-----CccEEEeCCcCc------
Q 001446 181 YIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS------ 246 (1075)
Q Consensus 181 ~i~~~~v~~~~~~---~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~------ 246 (1075)
.++++|+++.|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 6899999999963 25799999999999999999999999999999999999986 799999998641
Q ss_pred c---cc-ccEEEEcCCCC--CC-cCCHHHHhcCCCCC-CcccCcCCHHHHHHHHHHcCChh---HHhcCCCCcccCCCCC
Q 001446 247 D---LN-KEIFYVPQRPY--TA-VGTLRDQLIYPLTS-DQEVEPLTHGGMVELLKNVDLEY---LLDRYPPEKEINWGDE 315 (1075)
Q Consensus 247 ~---~~-~~i~~v~Q~~~--~~-~~tv~~ni~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~---~~~~~~~~~~~~~g~~ 315 (1075)
. .+ ++++|+||+|. ++ ..|+++|+.++... .........+++.++++.++|.+ ..++.+ .+
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~--------~~ 156 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYP--------HQ 156 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhhCC--------cc
Confidence 1 12 47999999985 33 35899998643211 01111112356778999999975 346655 68
Q ss_pred CChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 316 LSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 316 LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|||||||||+|||||+.+|++|||||||++||+.+...+.+.+++ .|+|+|+||||++.+. .||+|++|++
T Consensus 157 LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~ 232 (529)
T PRK15134 157 LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQN 232 (529)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEEC
Confidence 999999999999999999999999999999999999999887764 3899999999999875 7999999985
No 22
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=4.7e-63 Score=594.58 Aligned_cols=196 Identities=26% Similarity=0.320 Sum_probs=162.2
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCC--CCCccEEEeCC----------------
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLW--PLVSGHIAKPG---------------- 243 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~--~~~~G~i~~~~---------------- 243 (1075)
|+++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+. +|++|+|.+++
T Consensus 1 l~~~~l~~~~~-~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~g 79 (520)
T TIGR03269 1 IEVKNLTKKFD-GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKVG 79 (520)
T ss_pred CEEEEEEEEEC-CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccccc
Confidence 46899999995 468999999999999999999999999999999999997 79999999862
Q ss_pred -------cC----------------ccccccEEEEcCC-CCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCCh
Q 001446 244 -------VG----------------SDLNKEIFYVPQR-PYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE 298 (1075)
Q Consensus 244 -------~~----------------~~~~~~i~~v~Q~-~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 298 (1075)
.+ ..+++.++|+||+ +.++. .|++||+.++............+++.++++.+++.
T Consensus 80 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 159 (520)
T TIGR03269 80 EPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIEMVQLS 159 (520)
T ss_pred cccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh
Confidence 10 0124569999998 45554 59999998753211111111234677899999998
Q ss_pred hHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhh
Q 001446 299 YLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPAL 374 (1075)
Q Consensus 299 ~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~ 374 (1075)
+..++.+ .+|||||||||+|||||+.+|++|||||||++||+.+..++.+.+++ .|+|||+||||++.
T Consensus 160 ~~~~~~~--------~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~~ 231 (520)
T TIGR03269 160 HRITHIA--------RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPEV 231 (520)
T ss_pred hhhhcCc--------ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHH
Confidence 8888766 68999999999999999999999999999999999999998776643 48899999999998
Q ss_pred Hh-hCCeEEEEcC
Q 001446 375 VA-FHDVVLSLDG 386 (1075)
Q Consensus 375 ~~-~~d~i~~l~~ 386 (1075)
+. .||++++|++
T Consensus 232 ~~~~~d~i~~l~~ 244 (520)
T TIGR03269 232 IEDLSDKAIWLEN 244 (520)
T ss_pred HHHhcCEEEEEeC
Confidence 75 6999999975
No 23
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-63 Score=589.16 Aligned_cols=197 Identities=21% Similarity=0.311 Sum_probs=166.6
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc-------cccccEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIF 253 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~-------~~~~~i~ 253 (1075)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.++
T Consensus 4 ~l~~~~l~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i~ 82 (501)
T PRK11288 4 YLSFDGIGKTFP-GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGVA 82 (501)
T ss_pred eEEEeeeEEEEC-CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCEE
Confidence 689999999996 46799999999999999999999999999999999999999999999998541 1356799
Q ss_pred EEcCCCCCCc-CCHHHHhcCCCCCC--cc-cCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHH
Q 001446 254 YVPQRPYTAV-GTLRDQLIYPLTSD--QE-VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 329 (1075)
Q Consensus 254 ~v~Q~~~~~~-~tv~~ni~~~~~~~--~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAra 329 (1075)
|+||++.++. .|+++|+.++.... .. ......+++.++++.+++.+..++.+ .+||||||||++||||
T Consensus 83 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgGq~qrv~lara 154 (501)
T PRK11288 83 IIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPL--------KYLSIGQRQMVEIAKA 154 (501)
T ss_pred EEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCch--------hhCCHHHHHHHHHHHH
Confidence 9999998766 49999999864211 10 01112346778899999976666555 6899999999999999
Q ss_pred HcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 330 FYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 330 l~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|+||||++.+. .||++++|++
T Consensus 155 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~ 215 (501)
T PRK11288 155 LARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKD 215 (501)
T ss_pred HHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999887764 4899999999999874 6999999985
No 24
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.9e-62 Score=587.10 Aligned_cols=196 Identities=23% Similarity=0.328 Sum_probs=162.8
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCC--CccEEEeCCcCc-------cccccE
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL--VSGHIAKPGVGS-------DLNKEI 252 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~--~~G~i~~~~~~~-------~~~~~i 252 (1075)
++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+.+| ++|+|.++|.+. ..++.+
T Consensus 2 l~i~~l~~~~~-~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (500)
T TIGR02633 2 LEMKGIVKTFG-GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAGI 80 (500)
T ss_pred EEEEeEEEEeC-CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCCE
Confidence 78999999995 46799999999999999999999999999999999999987 799999998541 123579
Q ss_pred EEEcCCCCCCc-CCHHHHhcCCCCCCc----ccCcCCHHHHHHHHHHcCChhHH-hcCCCCcccCCCCCCChhHHHHHHH
Q 001446 253 FYVPQRPYTAV-GTLRDQLIYPLTSDQ----EVEPLTHGGMVELLKNVDLEYLL-DRYPPEKEINWGDELSLGEQQRLGM 326 (1075)
Q Consensus 253 ~~v~Q~~~~~~-~tv~~ni~~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~~~~~~g~~LSgGqkqRl~l 326 (1075)
+||||++.++. .|++||+.++..... .......+++.++++.+++.+.. ++.+ .+|||||||||+|
T Consensus 81 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--------~~LSgG~~qrv~i 152 (500)
T TIGR02633 81 VIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPV--------GDYGGGQQQLVEI 152 (500)
T ss_pred EEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCch--------hhCCHHHHHHHHH
Confidence 99999987665 599999987643210 00111234567889999987644 3333 6899999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 327 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 327 Aral~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
||||+.+|+++||||||++||+.+...+.+.+++ .|+|+|+||||++.+. .||++++|++
T Consensus 153 A~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~ 216 (500)
T TIGR02633 153 AKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRD 216 (500)
T ss_pred HHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeC
Confidence 9999999999999999999999999999887654 5889999999999875 6999999975
No 25
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=3e-61 Score=596.76 Aligned_cols=459 Identities=20% Similarity=0.234 Sum_probs=319.0
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHHHH---
Q 001446 550 FIAPSIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDI--- 626 (1075)
Q Consensus 550 ~~~~~~~~~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~~~--- 626 (1075)
+..+...++..++..++|..+++++++. +..||+ ....+++.+|+++|++.+...+...+..++..++.+
T Consensus 220 l~~~~~~~~~~~~~~~lr~~l~~~ll~~---~~~~f~----~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~ 292 (711)
T TIGR00958 220 LRGGSFNYTMARINLRIREDLFRSLLRQ---DLGFFD----ENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGL 292 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC---CHHHHc----CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445556666666777777766653 234554 234577899999999999877765554444433332
Q ss_pred ----HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHH
Q 001446 627 ----LWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKA 702 (1075)
Q Consensus 627 ----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~ 702 (1075)
++++|.++++. + +..++...+.....+.......+.++..+.+.....+...+.++|+.|++++.+.+
T Consensus 293 ~~~l~~~s~~l~l~~-------l-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~ 364 (711)
T TIGR00958 293 LGFMLWLSPRLTMVT-------L-INLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEAS 364 (711)
T ss_pred HHHHHHHhHHHHHHH-------H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHH
Confidence 33444443321 1 11111112222233333444445455555555556666678899999999988887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHHHHHH
Q 001446 703 MIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLA 782 (1075)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~ 782 (1075)
.+.+..++..+...+.............++. .+...+.++++........ .+.|.+..+ ..+......+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~il~~g~~lv~~g~--it~G~lva~----~~~~~~l~~~ 433 (711)
T TIGR00958 365 RFKEALEETLQLNKRKALAYAGYLWTTSVLG-----MLIQVLVLYYGGQLVLTGK--VSSGNLVSF----LLYQEQLGEA 433 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHcCC--CCHHHHHHH----HHHHHHHHHH
Confidence 7777666665544332221111111111111 0111111222211110000 112333222 2234456667
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCC--ccccccccceee
Q 001446 783 FGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS--QKLLARQLTFEI 860 (1075)
Q Consensus 783 ~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~--~~~vL~~vs~~I 860 (1075)
+..+...+..+.+..++.+|+.++.+.+++.++. .. ..+++ ..|.|+|+||+|+||+ ++++|+|+||+|
T Consensus 434 l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~-----~~-~~~~~---~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i 504 (711)
T TIGR00958 434 VRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLT-----GT-LAPLN---LEGLIEFQDVSFSYPNRPDVPVLKGLTFTL 504 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-----CC-CCCCC---CCCeEEEEEEEEECCCCCCCccccCceEEE
Confidence 8888888888999999999999998654322111 00 01112 2578999999999986 358999999999
Q ss_pred cCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhhhhcCCCChHHH
Q 001446 861 VPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEA 938 (1075)
Q Consensus 861 ~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~ 938 (1075)
+|||++|||||||||||||+++|+|+|+|++|+|.+||+|++++ +.+|++|++|||||++|+|||||||.|+...
T Consensus 505 ~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~--- 581 (711)
T TIGR00958 505 HPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTD--- 581 (711)
T ss_pred cCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCC---
Confidence 99999999999999999999999999999999999999999987 4577889999999999999999999986431
Q ss_pred HHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeEee
Q 001446 939 ELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILD 1017 (1075)
Q Consensus 939 ~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLD 1017 (1075)
..|++++++++.++++++++++|+|+||.+ ++|.+||||||||||||||++|+|+|||||
T Consensus 582 -------------------~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARALl~~p~ILILD 642 (711)
T TIGR00958 582 -------------------TPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARALVRKPRVLILD 642 (711)
T ss_pred -------------------CCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 235667778888888889999999999986 578999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHhcCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1018 ECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1018 EATSalD~~~e~~i~~~~~~~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
||||+||.++|+.+++.....++|+|+||||+++++.+|++++|++|.
T Consensus 643 EpTSaLD~~te~~i~~~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ 690 (711)
T TIGR00958 643 EATSALDAECEQLLQESRSRASRTVLLIAHRLSTVERADQILVLKKGS 690 (711)
T ss_pred ccccccCHHHHHHHHHhhccCCCeEEEEeccHHHHHhCCEEEEEECCE
Confidence 999999999999998843336899999999999999999999998765
No 26
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-61 Score=579.76 Aligned_cols=192 Identities=21% Similarity=0.262 Sum_probs=162.4
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCccccccEEEEcCCCC
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPY 260 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~~ 260 (1075)
+|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. .+++|++|++.
T Consensus 1 ml~i~~ls~~~~-~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~-----~~i~~~~q~~~ 74 (530)
T PRK15064 1 MLSTANITMQFG-AKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPN-----ERLGKLRQDQF 74 (530)
T ss_pred CEEEEEEEEEeC-CcEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----CEEEEEeccCC
Confidence 378999999996 468999999999999999999999999999999999999999999999873 46999999987
Q ss_pred CCc-CCHHHHhcCCCCC-------------Cccc-------------------CcCCHHHHHHHHHHcCChhHHh-cCCC
Q 001446 261 TAV-GTLRDQLIYPLTS-------------DQEV-------------------EPLTHGGMVELLKNVDLEYLLD-RYPP 306 (1075)
Q Consensus 261 ~~~-~tv~~ni~~~~~~-------------~~~~-------------------~~~~~~~~~~~l~~~~l~~~~~-~~~~ 306 (1075)
++. .|++||+.++... .... ......++.++++.+++.+... +.+
T Consensus 75 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~- 153 (530)
T PRK15064 75 AFEEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGVGIPEEQHYGLM- 153 (530)
T ss_pred cCCCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCChhHhcCch-
Confidence 665 4999999865310 0000 0011245677888899876443 333
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHhcCCeEEEEecChhhHh-hCCeEEEEc
Q 001446 307 EKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVA-FHDVVLSLD 385 (1075)
Q Consensus 307 ~~~~~~g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~t~i~vtH~~~~~~-~~d~i~~l~ 385 (1075)
.+||||||||++|||||+.+|++|||||||++||+.+..++.+.+++.+.|||+||||++.+. .||++++|+
T Consensus 154 -------~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tiiivsHd~~~~~~~~d~i~~l~ 226 (530)
T PRK15064 154 -------SEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNERNSTMIIISHDRHFLNSVCTHMADLD 226 (530)
T ss_pred -------hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcceEEEEe
Confidence 689999999999999999999999999999999999999999999888999999999999875 699999998
Q ss_pred C
Q 001446 386 G 386 (1075)
Q Consensus 386 ~ 386 (1075)
+
T Consensus 227 ~ 227 (530)
T PRK15064 227 Y 227 (530)
T ss_pred C
Confidence 6
No 27
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=9.9e-61 Score=584.72 Aligned_cols=459 Identities=18% Similarity=0.214 Sum_probs=306.8
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHH-------H
Q 001446 553 PSIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSV-------D 625 (1075)
Q Consensus 553 ~~~~~~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~-------~ 625 (1075)
+....+..++..+.|..+++++++. +..+|+ ....+++.+|+++|++.+...+...+..++..++ .
T Consensus 85 ~~~~~~~~~~~~~lr~~~~~~ll~~---~~~~~~----~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~ 157 (588)
T PRK11174 85 RVGFKAGQHIRQQIRQQVLDKLQQL---GPAWIQ----GKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIA 157 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc---Cchhhc----cCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444555556666666666653 234444 2345678899999999998776554444333222 2
Q ss_pred HHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHHH
Q 001446 626 ILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIE 705 (1075)
Q Consensus 626 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~~ 705 (1075)
+++++|.++++. +++. ++.........+.......+.++..+.+.....+...+.++|+.|++++.+.+.+.
T Consensus 158 l~~~~~~l~l~~-------l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~ 229 (588)
T PRK11174 158 VFPINWAAGLIL-------LGTA-PLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIR 229 (588)
T ss_pred HHHHHHHHHHHH-------HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHH
Confidence 234556554432 1111 11111111111222222223233333344444555667889999999988877777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHH----HHHHHHH-HHHHHHHH
Q 001446 706 SRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGEL----AHALRFL-ASVVSQSF 780 (1075)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~l~~~-~~~~~~~~ 780 (1075)
+..++..+...+..+..........++....... +..+.+....+. .+.|.+ .....++ .......+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~----~t~G~l~~~~~~~~~~~~~~l~~~~~ 301 (588)
T PRK11174 230 SASEDFRQRTMEVLRMAFLSSAVLEFFASISIAL----VAVYFGFSYLGE----LNFGHYGTGVTLFAGFFVLILAPEFY 301 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHhcc----cccccccccchHHHHHHHHHHhHHHH
Confidence 6666665544333322222222211111110000 101111111111 011211 1111111 12334456
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCCccccccccceee
Q 001446 781 LAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQLTFEI 860 (1075)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~~~vL~~vs~~I 860 (1075)
.++..+......+..+..+.+|+.++.+.+++.+.. ...+ -+. ...+.|+|+||+|+|++++++|+|+||+|
T Consensus 302 ~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~-----~~~~--~~~-~~~~~i~~~~vsf~~~~~~~vL~~i~l~i 373 (588)
T PRK11174 302 QPLRDLGTFYHAKAQAVGAAESLVTFLETPLAHPQQ-----GEKE--LAS-NDPVTIEAEDLEILSPDGKTLAGPLNFTL 373 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCC-----Cccc--cCC-CCCceEEEEeeEEeccCCCeeeeeeEEEE
Confidence 678888888888888999999999998653221110 0000 010 11457999999986666678999999999
Q ss_pred cCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhhhhcCCCChHHH
Q 001446 861 VPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEA 938 (1075)
Q Consensus 861 ~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~ 938 (1075)
+|||++|||||||||||||+++|.|+| |++|+|.+||+|++++ ..+|++|+||||||+||+|||||||.|+..
T Consensus 374 ~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~---- 448 (588)
T PRK11174 374 PAGQRIALVGPSGAGKTSLLNALLGFL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNP---- 448 (588)
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCC----
Confidence 999999999999999999999999999 8999999999999988 357888999999999999999999998532
Q ss_pred HHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeEee
Q 001446 939 ELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILD 1017 (1075)
Q Consensus 939 ~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLD 1017 (1075)
+.+|++++++++.++++++++++|+||||.+ ++|.+||||||||||||||++++|+|||||
T Consensus 449 ------------------~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~LSGGQrQRialARAll~~~~IliLD 510 (588)
T PRK11174 449 ------------------DASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAAGLSVGQAQRLALARALLQPCQLLLLD 510 (588)
T ss_pred ------------------CCCHHHHHHHHHHhCHHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 1345667777888888888999999999986 678999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1018 ECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1018 EATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
|||||||.++|+.+++.+++ +++|+|+||||+++++.+|+++++++|.
T Consensus 511 E~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~ 560 (588)
T PRK11174 511 EPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQ 560 (588)
T ss_pred CCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCe
Confidence 99999999999999887754 5899999999999999999999998774
No 28
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=9.6e-61 Score=581.24 Aligned_cols=460 Identities=22% Similarity=0.259 Sum_probs=305.1
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhh-------
Q 001446 548 SSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMV------- 620 (1075)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i------- 620 (1075)
..+..+...+.........|..+++++++. +..+|+ ....+++.+|+++|++.+...+......+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~---~~~~~~----~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~ 141 (567)
T COG1132 69 RALQSYLGSRLGQKIVADLRRDLFEKLLRL---PLSFFD----KAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLI 141 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CHHHhC----cCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHH
Confidence 333334444445566666677777776653 224444 223577889999999998877766422222
Q ss_pred HhHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHH
Q 001446 621 KPSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGARE 700 (1075)
Q Consensus 621 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e 700 (1075)
..++.+++..|+++++.. +..+++.+...++.. +..+.....++..+.+.....+...+.+.++.|+.++.+
T Consensus 142 ~~~~~~~~~~~~l~l~~~-----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~ 213 (567)
T COG1132 142 GSLVLLFSLSWRLALILL-----LILPLLALVLSLLAR---KSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRE 213 (567)
T ss_pred HHHHHHHHHhHHHHHHHH-----HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHH
Confidence 112222344565554421 111111111111111 111222222222233333334444567789999988777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHHHH
Q 001446 701 KAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSF 780 (1075)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~ 780 (1075)
.+.+.....+.................+..++. .+...+.++++........ .+.|.+... ..+.....
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~--~~~g~~~~~----~~~~~~~~ 282 (567)
T COG1132 214 LKRFEEANEELRRANLRASRLEALLAPLMLLLS-----SLGTVLVLALGGFLVLSGS--LTVGALAAF----ILYLLRLL 282 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHcCC--CCHhHHHHH----HHHHHHHH
Confidence 666555555444443222211111111111111 1111222222221100000 112333222 23344555
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCCccccccccceee
Q 001446 781 LAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQLTFEI 860 (1075)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~~~vL~~vs~~I 860 (1075)
.++..+......+.....+.+|++++.+.++...+.+. . .....|+|+|+||+|+||+++++|+|+||+|
T Consensus 283 ~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~-------~---~~~~~~~I~f~~vsf~y~~~~~vl~~is~~i 352 (567)
T COG1132 283 TPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPD-------P---LKDTIGSIEFENVSFSYPGKKPVLKDISFSI 352 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCC-------C---CCCCCCeEEEEEEEEEcCCCCccccCceEEE
Confidence 67778888888888888999999999875332221110 0 1123578999999999998889999999999
Q ss_pred cCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhhhhcCCCChHHH
Q 001446 861 VPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEA 938 (1075)
Q Consensus 861 ~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~ 938 (1075)
+|||+|||||||||||||++++|+|||||++|+|.+||+||+++ +.+|.+|++|||||+||+||||+||.|+...
T Consensus 353 ~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~--- 429 (567)
T COG1132 353 EPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPD--- 429 (567)
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCC---
Confidence 99999999999999999999999999999999999999999998 5678999999999999999999999986431
Q ss_pred HHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeEee
Q 001446 939 ELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILD 1017 (1075)
Q Consensus 939 ~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLD 1017 (1075)
.+|++++++++.+++.++++++|+||||.+ ++|.+||||||||||||||++|+|||||||
T Consensus 430 -------------------at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ILILD 490 (567)
T COG1132 430 -------------------ATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPPILILD 490 (567)
T ss_pred -------------------CCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 124445555555566667777889999987 478999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1018 ECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1018 EATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
||||+||.++|..|++.++. .++|+|+||||+++++..|+++++++|.
T Consensus 491 EaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~ 540 (567)
T COG1132 491 EATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGR 540 (567)
T ss_pred ccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCE
Confidence 99999999999999988753 5889999999999999999999998876
No 29
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.8e-60 Score=575.03 Aligned_cols=439 Identities=19% Similarity=0.139 Sum_probs=290.6
Q ss_pred HHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHHHH-------HHHH
Q 001446 558 LTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDI-------LWFT 630 (1075)
Q Consensus 558 ~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~~~-------~~~~ 630 (1075)
+..+...+.|..+++++++. +..||+ ....++..+|+++|++.+...+...+..++..++.+ ++++
T Consensus 80 ~~~~~~~~lr~~~~~~ll~~---~~~~~~----~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 152 (529)
T TIGR02868 80 AALRSLGRLRVRVYDRLARL---ALAGRR----RFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLS 152 (529)
T ss_pred HHHHHHHHHHHHHHHHhhcc---Cccccc----cCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444455566666665542 234554 234577889999999999887766554444333322 3345
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHHHHHHHH
Q 001446 631 WRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFRE 710 (1075)
Q Consensus 631 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~~~~~~~ 710 (1075)
|.++++. ++..+++.........+.......+.++..+.+.....+...+.++|+.|+.++.+.+.+.+..++
T Consensus 153 ~~l~l~~-------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~ 225 (529)
T TIGR02868 153 VPAALVL-------AAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRE 225 (529)
T ss_pred HHHHHHH-------HHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHH
Confidence 5544332 111111111110111111112222233333444455556666789999999988887777666555
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 711 LLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDILELH 790 (1075)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~ 790 (1075)
..+...+......+......++. .+...+.++++........ .+.|.+... ..+......++..+....
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~g~--~t~g~l~~~----~~~~~~~~~~~~~l~~~~ 294 (529)
T TIGR02868 226 LLAAERRAARATGLGAAAQLLAA-----GLAVLGALWAGGPAVADGT--LAPATLAVL----VLLPLAAFEAFAPLPAAA 294 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhCCC--CChhHHHHH----HHHHHHHHHHHHHHHHHH
Confidence 55443332222211111111111 1111122222221100000 112222222 222334455677777777
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCCccccccccceeecCCCeEEEEc
Q 001446 791 RKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTG 870 (1075)
Q Consensus 791 ~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG 870 (1075)
..+.....+.+|+.++.+.+++.+.... ......++ ..+.|+|+||+|+||+++++|+|+||+|+|||++||||
T Consensus 295 ~~~~~~~~~~~ri~~~l~~~~~~~~~~~---~~~~~~~~---~~~~I~~~~vsf~Y~~~~~vL~~isl~i~~G~~vaIvG 368 (529)
T TIGR02868 295 QALTRVRAAAERIEEVTGAKGPRPEGVV---PAAGALGL---GKPTLELRDLSFGYPGSPPVLDGVSLDLPPGERVAILG 368 (529)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcCCCCC---CCCcccCC---CCceEEEEEEEEecCCCCceeecceEEEcCCCEEEEEC
Confidence 8888888999999998865432211100 00001112 24679999999999877789999999999999999999
Q ss_pred CCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc-cCCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCC
Q 001446 871 PNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKG 949 (1075)
Q Consensus 871 ~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~-~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~ 949 (1075)
|||||||||+++|+|+|+|++|+|.+||+|++++ +.+|++|+||||||+||+|||||||.|+.+.
T Consensus 369 ~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~-------------- 434 (529)
T TIGR02868 369 PSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSLQDELRRRISVFAQDAHLFDTTVRDNLRLGRPD-------------- 434 (529)
T ss_pred CCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhHHHHHHhheEEEccCcccccccHHHHHhccCCC--------------
Confidence 9999999999999999999999999999999987 3467889999999999999999999985421
Q ss_pred cccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHH
Q 001446 950 EKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVE 1028 (1075)
Q Consensus 950 ~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e 1028 (1075)
.+|++++++++.+++++++.++|+||||.+ ++|.+||||||||||||||++++|+||||||||||||.++|
T Consensus 435 --------~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te 506 (529)
T TIGR02868 435 --------ATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTE 506 (529)
T ss_pred --------CCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHH
Confidence 235667778888888889999999999986 67899999999999999999999999999999999999999
Q ss_pred HHHHHHHHh--cCceEEEecCCC
Q 001446 1029 EQLYRLAKD--MGITFVTSSQRP 1049 (1075)
Q Consensus 1029 ~~i~~~~~~--~~~TvI~IaHRl 1049 (1075)
+.|++.+.+ .++|+|+||||+
T Consensus 507 ~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 507 SELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHHHhcCCCEEEEEecCC
Confidence 999988764 589999999996
No 30
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=3.1e-62 Score=516.86 Aligned_cols=199 Identities=27% Similarity=0.381 Sum_probs=163.5
Q ss_pred ccEEEEeEEEEcC---CCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCC-----CccEEEeCCcC------
Q 001446 180 NYIEFSGVKVVTP---TGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVG------ 245 (1075)
Q Consensus 180 ~~i~~~~v~~~~~---~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~-----~~G~i~~~~~~------ 245 (1075)
..++++|+++.+. +...+++++||++++||.++|||+||||||-..+.++|+++. -+|+|.++|.+
T Consensus 5 ~lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se 84 (534)
T COG4172 5 PLLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASE 84 (534)
T ss_pred cceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCH
Confidence 4688999998764 235799999999999999999999999999999999999975 47899999975
Q ss_pred cc---cc-ccEEEEcCCCCC---CcCCHHHHhcCCCCCCc-ccCcCCHHHHHHHHHHcCChh---HHhcCCCCcccCCCC
Q 001446 246 SD---LN-KEIFYVPQRPYT---AVGTLRDQLIYPLTSDQ-EVEPLTHGGMVELLKNVDLEY---LLDRYPPEKEINWGD 314 (1075)
Q Consensus 246 ~~---~~-~~i~~v~Q~~~~---~~~tv~~ni~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~---~~~~~~~~~~~~~g~ 314 (1075)
.. +| .+|+++||+|.. +.-||..+|.-+..... .......+++.++|+.+|+.+ .++.+| +
T Consensus 85 ~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p~~rl~~yP--------H 156 (534)
T COG4172 85 RQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEPEKRLDAYP--------H 156 (534)
T ss_pred HHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCchhhhhhhCC--------c
Confidence 11 22 479999999963 22477777754332211 112334567889999999965 466777 7
Q ss_pred CCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 315 ELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 315 ~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
+|||||||||.||.||+.+|++||.||||.|||.....+|++.+++ .|..+++||||+..++ .+|+|++|..
T Consensus 157 eLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~ 233 (534)
T COG4172 157 ELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQH 233 (534)
T ss_pred ccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEec
Confidence 9999999999999999999999999999999999999999888764 5999999999999986 6999999975
No 31
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.5e-61 Score=578.40 Aligned_cols=194 Identities=22% Similarity=0.375 Sum_probs=167.5
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc------c-ccccE
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D-LNKEI 252 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~-~~~~i 252 (1075)
..++++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+. . .++.+
T Consensus 10 ~~l~~~~l~~~~~-~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 10 PLLCARSISKQYS-GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred ceEEEEeEEEEeC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 3699999999996 46799999999999999999999999999999999999999999999998531 1 12469
Q ss_pred EEEcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHc
Q 001446 253 FYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 253 ~~v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~ 331 (1075)
+|+||++.++. .|++||+.++... .....+++.++++.+++.+..++.+ .+|||||||||+|||||+
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~----~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~la~aL~ 156 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPK----RQASMQKMKQLLAALGCQLDLDSSA--------GSLEVADRQIVEILRGLM 156 (510)
T ss_pred EEEeccCccCCCCcHHHHhhccccc----chHHHHHHHHHHHHcCCCccccCCh--------hhCCHHHHHHHHHHHHHH
Confidence 99999998766 4999999986432 1122356778999999987777665 689999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
.+|++|||||||++||+.+...+.+.+++ .|+|+|++|||++.+ ..||++++|++
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~ 215 (510)
T PRK15439 157 RDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRD 215 (510)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999887754 489999999999987 47999999985
No 32
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.7e-60 Score=574.66 Aligned_cols=193 Identities=21% Similarity=0.331 Sum_probs=162.2
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCccccccEEEEcCCC
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRP 259 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~ 259 (1075)
..|+++|+++.|++++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ +.+|+||||+|
T Consensus 5 ~~l~i~~l~~~y~~~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~-----~~~i~~v~Q~~ 79 (556)
T PRK11819 5 YIYTMNRVSKVVPPKKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAP-----GIKVGYLPQEP 79 (556)
T ss_pred EEEEEeeEEEEeCCCCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----CCEEEEEecCC
Confidence 3699999999996357899999999999999999999999999999999999999999999875 24799999999
Q ss_pred CCCc-CCHHHHhcCCCCCC--------------cccC----------------------cCCHHHHHHHHHHcCChhHHh
Q 001446 260 YTAV-GTLRDQLIYPLTSD--------------QEVE----------------------PLTHGGMVELLKNVDLEYLLD 302 (1075)
Q Consensus 260 ~~~~-~tv~~ni~~~~~~~--------------~~~~----------------------~~~~~~~~~~l~~~~l~~~~~ 302 (1075)
.+++ .|++||+.++.... .... .....++.++++.+++.. .+
T Consensus 80 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~ 158 (556)
T PRK11819 80 QLDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRCPP-WD 158 (556)
T ss_pred CCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCCCc-cc
Confidence 8776 49999998753100 0000 001234566777777753 34
Q ss_pred cCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHhcCCeEEEEecChhhHh-hCCeE
Q 001446 303 RYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVA-FHDVV 381 (1075)
Q Consensus 303 ~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~t~i~vtH~~~~~~-~~d~i 381 (1075)
+.+ .+|||||||||+|||||+.+|+++||||||++||+.+..++.+.+++.+.|+|+||||++.+. .||+|
T Consensus 159 ~~~--------~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~~tviiisHd~~~~~~~~d~i 230 (556)
T PRK11819 159 AKV--------TKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYPGTVVAVTHDRYFLDNVAGWI 230 (556)
T ss_pred Cch--------hhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeE
Confidence 433 689999999999999999999999999999999999999999999887789999999999885 68999
Q ss_pred EEEcC
Q 001446 382 LSLDG 386 (1075)
Q Consensus 382 ~~l~~ 386 (1075)
++|++
T Consensus 231 ~~l~~ 235 (556)
T PRK11819 231 LELDR 235 (556)
T ss_pred EEEeC
Confidence 99985
No 33
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-61 Score=577.88 Aligned_cols=194 Identities=24% Similarity=0.301 Sum_probs=162.0
Q ss_pred EEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc-------cccccEEEEc
Q 001446 184 FSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIFYVP 256 (1075)
Q Consensus 184 ~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~-------~~~~~i~~v~ 256 (1075)
++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|+|
T Consensus 1 ~~nl~~~~~-~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~ 79 (491)
T PRK10982 1 MSNISKSFP-GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMVH 79 (491)
T ss_pred CCceEEEeC-CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEEe
Confidence 368899885 46799999999999999999999999999999999999999999999998641 1246799999
Q ss_pred CCCCCCc-CCHHHHhcCCCCCC-cc--cCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcC
Q 001446 257 QRPYTAV-GTLRDQLIYPLTSD-QE--VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 332 (1075)
Q Consensus 257 Q~~~~~~-~tv~~ni~~~~~~~-~~--~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~ 332 (1075)
|++.++. .|++||+.++.... .. ......+++.++++.+++.+..++.+ .+|||||||||+|||||+.
T Consensus 80 q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgGq~qrv~lA~al~~ 151 (491)
T PRK10982 80 QELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV--------ATLSVSQMQMIEIAKAFSY 151 (491)
T ss_pred cccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch--------hhCCHHHHHHHHHHHHHHh
Confidence 9997654 59999998764211 10 01111245677888999877666655 6899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 333 KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 333 ~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
+|++|||||||++||+.+...+.+.+++ .|+|+|++|||++.+. .||++++|++
T Consensus 152 ~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~ 209 (491)
T PRK10982 152 NAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRD 209 (491)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999887754 5899999999999875 6999999985
No 34
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.5e-60 Score=522.11 Aligned_cols=207 Identities=27% Similarity=0.362 Sum_probs=187.3
Q ss_pred CCceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcE
Q 001446 834 QDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGI 911 (1075)
Q Consensus 834 ~g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i 911 (1075)
.|.|+|+||+|+|++.++||+|+||+|++||||||||+|||||||++++|+||+| .+|+|+|||+||+.+ +.+|+-|
T Consensus 349 ~~~I~F~dV~f~y~~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~I 427 (591)
T KOG0057|consen 349 GGSIEFDDVHFSYGPKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSI 427 (591)
T ss_pred CCcEEEEeeEEEeCCCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhhe
Confidence 5789999999999988889999999999999999999999999999999999999 999999999999998 4578889
Q ss_pred EEEcCCCCCCCcchhhhhcCCCC--hHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-c
Q 001446 912 FYVPQRPYTCLGTLRDQIIYPLS--REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-N 988 (1075)
Q Consensus 912 ~~VpQdP~Lf~gTir~NL~~p~~--~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~ 988 (1075)
++||||..||++||-+||.|+.. +++++.++| +..++++.+.++|+||+|.+ +
T Consensus 428 g~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~------------------------k~a~~hd~i~~l~~GY~T~VGe 483 (591)
T KOG0057|consen 428 GVVPQDSVLFNDTILYNIKYGNPSASDEEVVEAC------------------------KRAGLHDVISRLPDGYQTLVGE 483 (591)
T ss_pred eEeCCcccccchhHHHHhhcCCCCcCHHHHHHHH------------------------HHcCcHHHHHhccccchhhHhh
Confidence 99999999999999999999653 344444555 45555666777889999976 6
Q ss_pred cccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 989 WEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 989 ~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
.|..||||||||++||||+|++|+|++||||||+||.+||+.|.+.+.. .++|+|.|+||+++.+.+|+++.+++|.
T Consensus 484 rG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~ 562 (591)
T KOG0057|consen 484 RGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGT 562 (591)
T ss_pred cccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCe
Confidence 7889999999999999999999999999999999999999998887654 6999999999999999999999998775
No 35
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2.8e-61 Score=575.56 Aligned_cols=189 Identities=22% Similarity=0.252 Sum_probs=162.0
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 254 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 254 (1075)
+|+++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+|+|+|+++|++|+|.++|.+ ...++.++|
T Consensus 3 ~l~~~~l~~~~~-~~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~~ 81 (490)
T PRK10938 3 SLQISQGTFRLS-DTKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVSD 81 (490)
T ss_pred eEEEEeEEEEcC-CeeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhce
Confidence 589999999996 4569999999999999999999999999999999999999999999998753 122356999
Q ss_pred EcCCCCCC---------cCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHH
Q 001446 255 VPQRPYTA---------VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLG 325 (1075)
Q Consensus 255 v~Q~~~~~---------~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~ 325 (1075)
++|++... ..|+++|+.++. ...+++.++++.+++.+..++.+ .+||||||||++
T Consensus 82 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~ 145 (490)
T PRK10938 82 EWQRNNTDMLSPGEDDTGRTTAEIIQDEV--------KDPARCEQLAQQFGITALLDRRF--------KYLSTGETRKTL 145 (490)
T ss_pred eccCcchhhcccchhhccccHHHhcccch--------hHHHHHHHHHHHcCCHhhhhCCc--------ccCCHHHHHHHH
Confidence 99987531 347888875431 12456788999999988887766 689999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 326 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 326 lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|||||+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 146 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~ 210 (490)
T PRK10938 146 LCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLAD 210 (490)
T ss_pred HHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEEC
Confidence 99999999999999999999999999999888764 3889999999998874 6999999975
No 36
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=3.9e-60 Score=571.60 Aligned_cols=201 Identities=22% Similarity=0.340 Sum_probs=156.9
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCccccccEEEEcCCCC
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPY 260 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~~ 260 (1075)
.++++|+++.|++++++|+|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.+++ +..|+||||+|+
T Consensus 4 ~i~~~nls~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----~~~i~~v~Q~~~ 78 (552)
T TIGR03719 4 IYTMNRVSKVVPPKKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAP-----GIKVGYLPQEPQ 78 (552)
T ss_pred EEEEeeEEEecCCCCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----CCEEEEEeccCC
Confidence 689999999996456899999999999999999999999999999999999999999999875 247999999998
Q ss_pred CCc-CCHHHHhcCCCCCC--------------cccCcC------CHHHHHHHHHHcCChhH-------HhcCCCCcccCC
Q 001446 261 TAV-GTLRDQLIYPLTSD--------------QEVEPL------THGGMVELLKNVDLEYL-------LDRYPPEKEINW 312 (1075)
Q Consensus 261 ~~~-~tv~~ni~~~~~~~--------------~~~~~~------~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~~ 312 (1075)
++. .|++||+.++.... ...... ...++.+.++.++.++. ++..........
T Consensus 79 ~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~ 158 (552)
T TIGR03719 79 LDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCPPWDAD 158 (552)
T ss_pred CCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCCCcccCc
Confidence 765 59999998753210 000000 01123333333332211 111100000112
Q ss_pred CCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHhcCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 313 GDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 313 g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
..+||||||||++|||||+.+|+++||||||++||+.+..++.+.+++.+.|+|+|||+++.+. .||+++++++
T Consensus 159 ~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~~~tvIiisHd~~~~~~~~d~v~~l~~ 233 (552)
T TIGR03719 159 VTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEYPGTVVAVTHDRYFLDNVAGWILELDR 233 (552)
T ss_pred hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeEEEEEC
Confidence 3689999999999999999999999999999999999999999999887789999999999886 6899999985
No 37
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.1e-59 Score=584.01 Aligned_cols=452 Identities=17% Similarity=0.175 Sum_probs=308.4
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhH-------HHH
Q 001446 554 SIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPS-------VDI 626 (1075)
Q Consensus 554 ~~~~~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~-------~~~ 626 (1075)
....+..++...+|..+++++++. +..||+ ....++..+|++ |++.+...+...+..++..+ +.+
T Consensus 199 ~~~~~~~~~~~~l~~~~~~~ll~~---~~~~~~----~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l 270 (686)
T TIGR03797 199 AVLRLETRMDASLQAAVWDRLLRL---PVSFFR----QYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLM 270 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC---CHHHHC----CCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344555555566666665542 223443 234467788986 67777666554433322222 222
Q ss_pred HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHHHH
Q 001446 627 LWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIES 706 (1075)
Q Consensus 627 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~~~ 706 (1075)
++++|.++++.. +++.+++ .+.....+.......+..+..+.......+...+.++++.++.+......+.+
T Consensus 271 ~~~~~~l~li~l----~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~ 342 (686)
T TIGR03797 271 FYYSWKLALVAV----ALALVAI----AVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAK 342 (686)
T ss_pred HHHHHHHHHHHH----HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHH
Confidence 344454443321 1111111 11111222223333333444444445555666678999999998887777777
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 707 RFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDI 786 (1075)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~ 786 (1075)
.+.+..+...+......+...+..++.. +...+.++++........ .+.|.+.. +.........++..+
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~-----~~~~~il~~g~~lv~~g~--ltiG~lva----~~~l~~~~~~pl~~l 411 (686)
T TIGR03797 343 LFSRQRKLELSAQRIENLLTVFNAVLPV-----LTSAALFAAAISLLGGAG--LSLGSFLA----FNTAFGSFSGAVTQL 411 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHcCC--CCHHHHHH----HHHHHHHHHHHHHHH
Confidence 7766666554443333222222222211 111112222211110000 11233222 222344556778888
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCC-ccccccccceeecCCCe
Q 001446 787 LELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQLTFEIVPGKS 865 (1075)
Q Consensus 787 ~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~-~~~vL~~vs~~I~~Ge~ 865 (1075)
......+..+..+.+|+.++.+.+++.+.. .. . + ....|.|+|+||+|+||+ ++++|+|+||+|+|||+
T Consensus 412 ~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~-----~~--~--~-~~~~~~I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~ 481 (686)
T TIGR03797 412 SNTLISILAVIPLWERAKPILEALPEVDEA-----KT--D--P-GKLSGAIEVDRVTFRYRPDGPLILDDVSLQIEPGEF 481 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccccC-----cC--C--C-CCCCceEEEEEEEEEcCCCCccceeeeEEEECCCCE
Confidence 888889999999999999987643321110 00 0 1 112578999999999974 57899999999999999
Q ss_pred EEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHh
Q 001446 866 LLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRAL 943 (1075)
Q Consensus 866 vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~ 943 (1075)
+||||+||||||||+++|+|+|+|++|+|.+||+|++++ +.+|++|++|||||+||+|||||||.++..
T Consensus 482 vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~--------- 552 (686)
T TIGR03797 482 VAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAP--------- 552 (686)
T ss_pred EEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCC---------
Confidence 999999999999999999999999999999999999987 457889999999999999999999987532
Q ss_pred hhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCC
Q 001446 944 KLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNA 1022 (1075)
Q Consensus 944 ~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSa 1022 (1075)
.+|++++++++.++++++++++|+|+||.+ ++|.+||||||||||||||++++|+|||||||||+
T Consensus 553 --------------~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~p~iLiLDEpTS~ 618 (686)
T TIGR03797 553 --------------LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRKPRILLFDEATSA 618 (686)
T ss_pred --------------CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccC
Confidence 235667778888888889999999999986 67899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1023 TSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1023 lD~~~e~~i~~~~~~~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
||.++|+.+.+.++..++|+|+||||+++++.+|++++|++|.
T Consensus 619 LD~~te~~i~~~L~~~~~T~IiItHr~~~i~~~D~Iivl~~G~ 661 (686)
T TIGR03797 619 LDNRTQAIVSESLERLKVTRIVIAHRLSTIRNADRIYVLDAGR 661 (686)
T ss_pred CCHHHHHHHHHHHHHhCCeEEEEecChHHHHcCCEEEEEECCE
Confidence 9999999999888766899999999999999999999998764
No 38
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-62 Score=527.43 Aligned_cols=262 Identities=24% Similarity=0.300 Sum_probs=227.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCCccc
Q 001446 772 LASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKL 851 (1075)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~~~ 851 (1075)
+..++.++.++++.+...++.++..-.-+|+++++++.+++..+. ++ ..|-...+|.|+|+||+|.|..++|
T Consensus 481 f~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~----P~----a~pl~~~~G~i~fsnvtF~Y~p~k~ 552 (790)
T KOG0056|consen 481 FLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDL----PG----APPLKVTQGKIEFSNVTFAYDPGKP 552 (790)
T ss_pred HHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcC----CC----CCCccccCCeEEEEEeEEecCCCCc
Confidence 345677889999999999999999888899999988644333211 11 1133345799999999999988999
Q ss_pred cccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhhhh
Q 001446 852 LARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQI 929 (1075)
Q Consensus 852 vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~NL 929 (1075)
||+||||+++||++||+|||||+||||++++|+||||.++|+|.|||+||+.+ ..+|++|++||||.+||++||-.||
T Consensus 553 vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNI 632 (790)
T KOG0056|consen 553 VLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNI 632 (790)
T ss_pred eeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeehe
Confidence 99999999999999999999999999999999999999999999999999987 5689999999999999999999999
Q ss_pred cC--CCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHH
Q 001446 930 IY--PLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARL 1006 (1075)
Q Consensus 930 ~~--p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARA 1006 (1075)
.| |.+++|++.+|+++|+.||.+.. .|+||+|.+ +.|-.||||||||+||||+
T Consensus 633 ryak~~AsneevyaAAkAA~IHdrIl~------------------------fPegY~t~VGERGLkLSGGEKQRVAiARt 688 (790)
T KOG0056|consen 633 RYAKPSASNEEVYAAAKAAQIHDRILQ------------------------FPEGYNTRVGERGLKLSGGEKQRVAIART 688 (790)
T ss_pred eecCCCCChHHHHHHHHHhhHHHHHhc------------------------CchhhhhhhhhcccccCCcchhhHHHHHH
Confidence 99 55667777888888776554433 366777765 5677899999999999999
Q ss_pred hhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1007 FFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1007 lLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
+|++|.|++|||||||||..+|++||..+.. +++|.|+|||||||+..+|.+|++++|-
T Consensus 689 iLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~ 749 (790)
T KOG0056|consen 689 ILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGR 749 (790)
T ss_pred HhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCe
Confidence 9999999999999999999999999988764 6999999999999999999999998874
No 39
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=3.7e-59 Score=581.34 Aligned_cols=457 Identities=17% Similarity=0.177 Sum_probs=309.9
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhH-------HH
Q 001446 553 PSIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPS-------VD 625 (1075)
Q Consensus 553 ~~~~~~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~-------~~ 625 (1075)
+....+..++...+|..+++++++. +..||+ ....++..+|++ |++.+...+......++..+ +.
T Consensus 218 ~~~~~~~~~~~~~l~~~~~~~ll~l---~~~~f~----~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 289 (708)
T TIGR01193 218 FLLNVLGQRLSIDIILSYIKHLFEL---PMSFFS----TRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLF 289 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC---CHHHhC----CCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444555555566666665542 223443 234567888997 78777666554433332222 22
Q ss_pred HHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHHH
Q 001446 626 ILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIE 705 (1075)
Q Consensus 626 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~~ 705 (1075)
+++++|.++++. ++.+++...+.....++..+...+..+..+.......+...+.++|+++++++.+.+.+.
T Consensus 290 l~~~~~~l~li~--------l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~ 361 (708)
T TIGR01193 290 LVRQNMLLFLLS--------LLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKID 361 (708)
T ss_pred HHHHhHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHH
Confidence 234455544332 111111111112222233333444444444444455556667899999999888877777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 001446 706 SRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGD 785 (1075)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~ 785 (1075)
+.+.+..+...+......+...+..++.. +...+.++++....... ..+.|.+.. +.........++..
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~il~~g~~lv~~g--~ls~G~lva----~~~l~~~~~~pl~~ 430 (708)
T TIGR01193 362 SEFGDYLNKSFKYQKADQGQQAIKAVTKL-----ILNVVILWTGAYLVMRG--KLTLGQLIT----FNALLSYFLTPLEN 430 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHcC--CCCHHHHHH----HHHHHHHHHHHHHH
Confidence 77766665544332222111111111111 11111222221111000 012233322 22334456678888
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCCccccccccceeecCCCe
Q 001446 786 ILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQLTFEIVPGKS 865 (1075)
Q Consensus 786 ~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~ 865 (1075)
+......+.+...+++|+.++.+.+++.+... .....++ ..|.|+|+||+|+|++++++|+|+||+|+|||+
T Consensus 431 l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~-----~~~~~~~---~~~~I~~~~vsf~y~~~~~iL~~isl~i~~G~~ 502 (708)
T TIGR01193 431 IINLQPKLQAARVANNRLNEVYLVDSEFINKK-----KRTELNN---LNGDIVINDVSYSYGYGSNILSDISLTIKMNSK 502 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcccccc-----cccCCCC---CCCcEEEEEEEEEcCCCCcceeceeEEECCCCE
Confidence 88889999999999999999986543322110 0011111 257899999999998777899999999999999
Q ss_pred EEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHh
Q 001446 866 LLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRAL 943 (1075)
Q Consensus 866 vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~ 943 (1075)
||||||||||||||+++|.|+|+|++|+|.+||+|++++ +.+|++|+||||||+||+|||||||.++..
T Consensus 503 vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~--------- 573 (708)
T TIGR01193 503 TTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAK--------- 573 (708)
T ss_pred EEEECCCCCCHHHHHHHHhccCCCCCcEEEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCC---------
Confidence 999999999999999999999999999999999999988 457889999999999999999999997521
Q ss_pred hhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCC
Q 001446 944 KLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNA 1022 (1075)
Q Consensus 944 ~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSa 1022 (1075)
++..|++++++++.+++++++.++|.||||.+ ++|.+|||||||||+||||++++|+|||||||||+
T Consensus 574 ------------~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQRialARall~~p~iliLDE~Ts~ 641 (708)
T TIGR01193 574 ------------ENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQKQRIALARALLTDSKVLILDESTSN 641 (708)
T ss_pred ------------CCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCcccc
Confidence 11235566777777888888888999999986 67899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHh-cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1023 TSVDVEEQLYRLAKD-MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1023 lD~~~e~~i~~~~~~-~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
||.++|+.+++.++. .++|+|+||||+++++.+|+++++++|.
T Consensus 642 LD~~te~~i~~~L~~~~~~T~IiitHr~~~~~~~D~i~~l~~G~ 685 (708)
T TIGR01193 642 LDTITEKKIVNNLLNLQDKTIIFVAHRLSVAKQSDKIIVLDHGK 685 (708)
T ss_pred CCHHHHHHHHHHHHHhcCCEEEEEecchHHHHcCCEEEEEECCE
Confidence 999999999887765 5899999999999999999999998775
No 40
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=4.4e-59 Score=581.47 Aligned_cols=461 Identities=21% Similarity=0.234 Sum_probs=308.6
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHHHH-------
Q 001446 554 SIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDI------- 626 (1075)
Q Consensus 554 ~~~~~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~~~------- 626 (1075)
....+..++...++..+++++++. +..||+ ....++..+|++.| +.+...+...+..++..++.+
T Consensus 217 ~~~~~~~~~~~~l~~~~~~~ll~l---~~~~~~----~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l 288 (710)
T TIGR03796 217 YLRRLQIKLAVGMSARFLWHILRL---PVRFFA----QRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLM 288 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC---CHHHHc----CCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344455555555666655542 223443 23456788899888 456655554443333333222
Q ss_pred HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHHHH
Q 001446 627 LWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIES 706 (1075)
Q Consensus 627 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~~~ 706 (1075)
++++|.++++. ++..++...+.....+.......+.++..+.......+...+.++|+.++++....+.+.+
T Consensus 289 ~~~~~~l~li~--------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~ 360 (710)
T TIGR03796 289 LLYDPVLTLIG--------IAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAG 360 (710)
T ss_pred HHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHH
Confidence 33444443331 1111111111122222223333333333344444445555678999999998888777776
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 707 RFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDI 786 (1075)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~ 786 (1075)
.+.+..+...+......+...+..++.... ..+.++++........ .+.|.+.. +.........++..+
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~~il~~g~~~v~~g~--lt~G~lva----~~~l~~~~~~p~~~l 429 (710)
T TIGR03796 361 YQAKLLNAQQELGVLTQILGVLPTLLTSLN-----SALILVVGGLRVMEGQ--LTIGMLVA----FQSLMSSFLEPVNNL 429 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHcCC--CCHHHHHH----HHHHHHHHHHHHHHH
Confidence 666666554433322222222222221111 1111222211110000 12233322 223344566778888
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCC-ccccccccceeecCCCe
Q 001446 787 LELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQLTFEIVPGKS 865 (1075)
Q Consensus 787 ~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~-~~~vL~~vs~~I~~Ge~ 865 (1075)
......+..+..+.+|+.++++.+++.+............ +.....|.|+|+||+|+||+ .+++|+|+||+|+|||+
T Consensus 430 ~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~--~~~~~~~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~ 507 (710)
T TIGR03796 430 VGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSE--PSPRLSGYVELRNITFGYSPLEPPLIENFSLTLQPGQR 507 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCccccccccccccccc--cCCCCCCeEEEEEEEEecCCCCCCcccceeEEEcCCCE
Confidence 8888899999999999999986543322110000000000 10112578999999999986 57899999999999999
Q ss_pred EEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHh
Q 001446 866 LLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRAL 943 (1075)
Q Consensus 866 vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~ 943 (1075)
||||||||||||||+++|+|+|+|++|+|.+||+|++++ +.+|++|+||||||+||+|||||||.+...
T Consensus 508 vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~--------- 578 (710)
T TIGR03796 508 VALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDP--------- 578 (710)
T ss_pred EEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCC---------
Confidence 999999999999999999999999999999999999987 457889999999999999999999986421
Q ss_pred hhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCC
Q 001446 944 KLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNA 1022 (1075)
Q Consensus 944 ~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSa 1022 (1075)
+..|++++++++.+++++++.++|+|+||.+ ++|.+||||||||||||||++++|+|||||||||+
T Consensus 579 -------------~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLARall~~p~iliLDEptS~ 645 (710)
T TIGR03796 579 -------------TIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGGQRQRLEIARALVRNPSILILDEATSA 645 (710)
T ss_pred -------------CCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHHHHHHHHHHHHHhhCCCEEEEECcccc
Confidence 1235667777888888888999999999986 67899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1023 TSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1023 lD~~~e~~i~~~~~~~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
||.++|+.+.+.++..++|+|+||||+++++.+|++++|++|.
T Consensus 646 LD~~te~~i~~~l~~~~~T~IiitHrl~~i~~~D~Iivl~~G~ 688 (710)
T TIGR03796 646 LDPETEKIIDDNLRRRGCTCIIVAHRLSTIRDCDEIIVLERGK 688 (710)
T ss_pred CCHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEeCCE
Confidence 9999999999888778999999999999999999999998764
No 41
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-59 Score=566.55 Aligned_cols=192 Identities=22% Similarity=0.286 Sum_probs=156.7
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCccccccEEEEcCCCC
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPY 260 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~~ 260 (1075)
+|.++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+|+|+|+++|++|+|.++|. ..++|++|++.
T Consensus 1 ~i~i~nls~~~g-~~~~l~~vs~~i~~Ge~v~LvG~NGsGKSTLLkiL~G~~~pd~G~I~~~~~-----~~i~~~~q~~~ 74 (638)
T PRK10636 1 MIVFSSLQIRRG-VRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGN-----WQLAWVNQETP 74 (638)
T ss_pred CEEEEEEEEEeC-CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----CEEEEEecCCC
Confidence 378999999995 568999999999999999999999999999999999999999999999873 25999999764
Q ss_pred CCcCCHHHHhcCCCC---------------C------------CcccCcCCHHHHHHHHHHcCCh-hHHhcCCCCcccCC
Q 001446 261 TAVGTLRDQLIYPLT---------------S------------DQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINW 312 (1075)
Q Consensus 261 ~~~~tv~~ni~~~~~---------------~------------~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~ 312 (1075)
.+..++.+.+.-... . ..........++.++++.+|+. +..++.+
T Consensus 75 ~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~------- 147 (638)
T PRK10636 75 ALPQPALEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWTIRSRAASLLHGLGFSNEQLERPV------- 147 (638)
T ss_pred CCCCCHHHHHHHhhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCcchHHHHHHHHHhCCCCchhhcCch-------
Confidence 444455444321100 0 0000011234677788888886 4555544
Q ss_pred CCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHhcCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 313 GDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 313 g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
.+|||||||||+|||||+.+|++|||||||++||+.+..++.+.+++.+.|+|+||||.+++. .||++++|++
T Consensus 148 -~~LSgGerqRv~LA~aL~~~P~lLLLDEPtn~LD~~~~~~L~~~L~~~~~tviivsHd~~~l~~~~d~i~~L~~ 221 (638)
T PRK10636 148 -SDFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQ 221 (638)
T ss_pred -hhcCHHHHHHHHHHHHHccCCCEEEEcCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHhcCEEEEEeC
Confidence 689999999999999999999999999999999999999999999988889999999999885 6999999985
No 42
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.2e-58 Score=602.56 Aligned_cols=201 Identities=19% Similarity=0.267 Sum_probs=162.6
Q ss_pred ceEEeeeeeeCC---CccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCC---CCCCeEecCCCCCccccCCcC
Q 001446 836 SISFSKLDIITP---SQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP---VVSGSLTKPSQHIDEEAGSGC 909 (1075)
Q Consensus 836 ~I~f~~V~~~yp---~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~---~~sG~I~idg~di~~~~~~r~ 909 (1075)
.++++||++.|+ +.+++|+|||++|+|||.+||+||||||||||+++|.|+.+ +++|+|.+||.+++. ..|+
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~--~~~~ 836 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS--SFQR 836 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh--hhhc
Confidence 379999999875 24679999999999999999999999999999999999998 688999999998853 3466
Q ss_pred cEEEEcCCCC-CCCcchhhhhcCCC------ChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccC
Q 001446 910 GIFYVPQRPY-TCLGTLRDQIIYPL------SREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVG 982 (1075)
Q Consensus 910 ~i~~VpQdP~-Lf~gTir~NL~~p~------~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~G 982 (1075)
+++||||++. ++..|+||||.+.. ..+++ ..++.+.++++.++|.+.
T Consensus 837 ~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~-------------------~~~~~v~~~l~~l~L~~~------- 890 (1394)
T TIGR00956 837 SIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKS-------------------EKMEYVEEVIKLLEMESY------- 890 (1394)
T ss_pred ceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHH-------------------HHHHHHHHHHHHcCChhh-------
Confidence 7999999976 45679999998521 10000 012345677787777443
Q ss_pred Ccccc-ccccCCChhHHHHHHHHHHhhcCCC-EeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCch--hhc
Q 001446 983 WDANL-NWEDILSLGEQQRLGMARLFFHKPK-FGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI--PFH 1055 (1075)
Q Consensus 983 ldt~~-~~g~~LSgGQrQrlaiARAlLr~p~-ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i--~~~ 1055 (1075)
.|+.+ +.+..||||||||++|||||+++|+ ||+||||||+||..+...+.+.+++ .|+|||+++|+++.. +..
T Consensus 891 ~d~~v~~~~~~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~ 970 (1394)
T TIGR00956 891 ADAVVGVPGEGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEF 970 (1394)
T ss_pred CCCeeCCCCCCCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhc
Confidence 34443 2345799999999999999999997 9999999999999999888777653 589999999999863 678
Q ss_pred cceEEEEcC
Q 001446 1056 SLELRLIDG 1064 (1075)
Q Consensus 1056 ~~~l~l~~g 1064 (1075)
|+++.|.+|
T Consensus 971 D~vl~L~~G 979 (1394)
T TIGR00956 971 DRLLLLQKG 979 (1394)
T ss_pred CEEEEEcCC
Confidence 999999665
No 43
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4.6e-58 Score=556.16 Aligned_cols=456 Identities=22% Similarity=0.241 Sum_probs=310.3
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHH-------H
Q 001446 553 PSIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSV-------D 625 (1075)
Q Consensus 553 ~~~~~~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~-------~ 625 (1075)
+.......+.....|.++++++++. +..+|+ ....++..+|+++|++.+...+...+..++..++ .
T Consensus 82 ~~~~~~~~~~~~~lR~~l~~~l~~~---~~~~~~----~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~ 154 (574)
T PRK11160 82 LVSHDATFRVLTHLRVFTFSKLLPL---SPAGLA----RYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIG 154 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc---ChHhhc----cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333445555666677777776652 223443 2345678899999999998877655544433322 2
Q ss_pred HHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHHH
Q 001446 626 ILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIE 705 (1075)
Q Consensus 626 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~~ 705 (1075)
++++.|.++++... +++.+.+. ......+.......+.++..+.+.....+...+.+++++|+.++.+.+.+.
T Consensus 155 l~~~~~~l~l~~~~-----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~ 227 (574)
T PRK11160 155 LSFFDLTLALTLGG-----ILLLLLLL--LPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLE 227 (574)
T ss_pred HHHHHHHHHHHHHH-----HHHHHHHH--HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHH
Confidence 34556666544211 11111110 001111111222333344444455555666667889999999988888777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 001446 706 SRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGD 785 (1075)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~ 785 (1075)
+..++..+...+..+...+......++. .+..++.++++....... .+.|.+..++.+.. .....++..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~g~~~~~g~---~t~g~l~a~~~~~~---~~~~~~~~~ 296 (574)
T PRK11160 228 QTEQQWLAAQRRQANLTGLSQALMILAN-----GLTVVLMLWLAAGGVGGN---AQPGALIALFVFAA---LAAFEALMP 296 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHhccc---cchhHHHHHHHHHH---HHHHHHHHH
Confidence 7776666555443332222222222221 111122222222211110 11233322222211 112234555
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCCc-cccccccceeecCCC
Q 001446 786 ILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQ-KLLARQLTFEIVPGK 864 (1075)
Q Consensus 786 ~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~-~~vL~~vs~~I~~Ge 864 (1075)
+......+.+...+.+|+.++.+.+++.+.. ....+ + ...+.|+|+||+|+||+. +++|+|+||+|+|||
T Consensus 297 l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~~----~~~~~---~--~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~ 367 (574)
T PRK11160 297 VAGAFQHLGQVIASARRINEITEQKPEVTFP----TTSTA---A--ADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGE 367 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC----cccCC---C--CCCCeEEEEEEEEECCCCCCcceecceEEECCCC
Confidence 6666777788889999999998754321110 00000 1 124689999999999864 689999999999999
Q ss_pred eEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHH
Q 001446 865 SLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRA 942 (1075)
Q Consensus 865 ~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a 942 (1075)
++|||||||||||||+++|.|+|+|++|+|.+||+|++++ ..+|++|++|||||+||+|||||||.++..
T Consensus 368 ~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~-------- 439 (574)
T PRK11160 368 KVALLGRTGCGKSTLLQLLTRAWDPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAP-------- 439 (574)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCC--------
Confidence 9999999999999999999999999999999999999987 357888999999999999999999987532
Q ss_pred hhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCC
Q 001446 943 LKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECTN 1021 (1075)
Q Consensus 943 ~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATS 1021 (1075)
+..|++++++++.++++++++. |+||||.+ ++|.+||||||||+|||||++++|+|||||||||
T Consensus 440 --------------~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgGqrqRialARall~~~~ililDE~ts 504 (574)
T PRK11160 440 --------------NASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTE 504 (574)
T ss_pred --------------ccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcc
Confidence 1246677788889999999999 99999986 6789999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1022 ATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1022 alD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
+||.++|+.+++.+.+ .++|+|+||||+++++.+|+++++++|.
T Consensus 505 ~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~ 550 (574)
T PRK11160 505 GLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQ 550 (574)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCe
Confidence 9999999999888754 5899999999999999999999998775
No 44
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=4.6e-58 Score=570.28 Aligned_cols=456 Identities=18% Similarity=0.185 Sum_probs=309.5
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHH-------
Q 001446 552 APSIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSV------- 624 (1075)
Q Consensus 552 ~~~~~~~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~------- 624 (1075)
.+....+..++...+|..+++|+++.. ..| + ....++..+|+ +|++.+...+...+..++..++
T Consensus 208 ~~~~~~~~~~~~~~l~~~~~~~ll~l~---~~~-~----~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~ 278 (694)
T TIGR03375 208 SYFLDVAGKKADLILSAKLFERVLGLR---MEA-R----PASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLL 278 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC---ccc-C----CCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 333444445555555666666665432 222 2 23456778898 7998888776554333322222
Q ss_pred HHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHH
Q 001446 625 DILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMI 704 (1075)
Q Consensus 625 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~ 704 (1075)
.+++++|.++++. ++.+++...+.....++......+..+..+.......+...+.++|+.++.+..+.+.+
T Consensus 279 ~l~~~~~~l~li~--------l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~ 350 (694)
T TIGR03375 279 VIAIIGGPLVWVP--------LVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRW 350 (694)
T ss_pred HHHHHHhHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHH
Confidence 2234445444332 11111111111222223333333434444444445555666789999999988887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 001446 705 ESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFG 784 (1075)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 784 (1075)
.+.+.+..+...+......+...+..++.. +...+.++++....... ..+.|.+.. +..+......++.
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~il~~g~~~v~~g--~ls~G~l~a----~~~~~~~~~~p~~ 419 (694)
T TIGR03375 351 EQTVAALARSGLKSRFLSNLATNFAQFIQQ-----LVSVAIVVVGVYLISDG--ELTMGGLIA----CVMLSGRALAPLG 419 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHcC--CCCHHHHHH----HHHHHHHHHHHHH
Confidence 766666655444332222222222111111 11111222221111000 012233322 2233445567788
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCC-ccccccccceeecCC
Q 001446 785 DILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQLTFEIVPG 863 (1075)
Q Consensus 785 ~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~-~~~vL~~vs~~I~~G 863 (1075)
.+.....++.+...+.+|+.++.+.+++.+... .. . . .....|.|+|+||+|+||+ .+++|+|+||+|+||
T Consensus 420 ~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~----~~-~-~--~~~~~~~I~~~~vsf~Y~~~~~~vL~~i~l~i~~G 491 (694)
T TIGR03375 420 QLAGLLTRYQQAKTALQSLDELMQLPVERPEGT----RF-L-H--RPRLQGEIEFRNVSFAYPGQETPALDNVSLTIRPG 491 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC----CC-C-C--CCCccceEEEEEEEEEeCCCCccceeeeeEEECCC
Confidence 888888889999999999999987543221110 00 0 0 0112578999999999986 568999999999999
Q ss_pred CeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHH
Q 001446 864 KSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELR 941 (1075)
Q Consensus 864 e~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~ 941 (1075)
|++||||+||||||||+++|+|+|+|++|+|.+||+|++++ +.+|++|++|||||++|+|||||||.++..
T Consensus 492 ~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~------- 564 (694)
T TIGR03375 492 EKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAP------- 564 (694)
T ss_pred CEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCC-------
Confidence 99999999999999999999999999999999999999987 457889999999999999999999987532
Q ss_pred HhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeEeeccC
Q 001446 942 ALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECT 1020 (1075)
Q Consensus 942 a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEAT 1020 (1075)
+.+|++++++++.++++++++.+|+||||.+ ++|.+||||||||||||||++++|+|+||||||
T Consensus 565 ---------------~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlalARall~~p~iliLDE~T 629 (694)
T TIGR03375 565 ---------------YADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVALARALLRDPPILLLDEPT 629 (694)
T ss_pred ---------------CCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 1235667777788888888889999999986 678999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1021 NATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1021 SalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
|+||.++|+.+++.+.+ .++|+|+||||+++++.+|+++++++|.
T Consensus 630 s~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~ 676 (694)
T TIGR03375 630 SAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGR 676 (694)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCE
Confidence 99999999999887754 5899999999999999999999998774
No 45
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=5.1e-58 Score=560.60 Aligned_cols=453 Identities=17% Similarity=0.263 Sum_probs=310.0
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHHHH-------HH
Q 001446 556 RHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDI-------LW 628 (1075)
Q Consensus 556 ~~~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~~~-------~~ 628 (1075)
..+........|..+++++++. +..+|+ ....++..+|+++|++.+...+...+..++..++.+ ++
T Consensus 90 ~~~~~~~~~~lr~~~~~~l~~~---~~~~~~----~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 162 (582)
T PRK11176 90 SWVSGKVVMTMRRRLFGHMMGM---PVSFFD----KQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFY 162 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC---CHHHhC----CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555566666665542 122332 234567889999999998877665555444433333 33
Q ss_pred HHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHHHHHH
Q 001446 629 FTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRF 708 (1075)
Q Consensus 629 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~~~~~ 708 (1075)
++|.++++. ++ .+++.........++......+.++..+.+.....+...+.++++.++.++.+.+.+.+..
T Consensus 163 ~~~~l~l~~-------l~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~ 234 (582)
T PRK11176 163 YSWQLSLIL-------IV-IAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVS 234 (582)
T ss_pred HHHHHHHHH-------HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHH
Confidence 344433221 11 1111122222223333333444344444444445555667889999999888877777766
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 709 RELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDILE 788 (1075)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~ 788 (1075)
++..+...+..+...+......++... ...+.++++...... + ..+.|.+..+ .......+.++..+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~g~~~~~~-g-~is~g~~~~~----~~~~~~~~~pl~~l~~ 303 (582)
T PRK11176 235 NRMRQQGMKMVSASSISDPIIQLIASL-----ALAFVLYAASFPSVM-D-TLTAGTITVV----FSSMIALMRPLKSLTN 303 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHc-C-CCCHHHHHHH----HHHHHHHHHHHHHHHH
Confidence 666655544433332222222222111 111111111110000 0 0122333222 2233445667888888
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCC-ccccccccceeecCCCeEE
Q 001446 789 LHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQLTFEIVPGKSLL 867 (1075)
Q Consensus 789 ~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~-~~~vL~~vs~~I~~Ge~va 867 (1075)
....+.....+.+|+.++.+.+++.+.. . ...+ ...+.|+|+||+|+||+ .+++|+|+||+|+|||++|
T Consensus 304 ~~~~~~~~~~~~~ri~~~~~~~~~~~~~------~--~~~~--~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~~a 373 (582)
T PRK11176 304 VNAQFQRGMAACQTLFAILDLEQEKDEG------K--RVIE--RAKGDIEFRNVTFTYPGKEVPALRNINFKIPAGKTVA 373 (582)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcCCCC------C--cCCC--CCCCeEEEEEEEEecCCCCCccccCceEEeCCCCEEE
Confidence 8888888889999999887643221110 0 0111 12467999999999986 4789999999999999999
Q ss_pred EEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhh
Q 001446 868 VTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKL 945 (1075)
Q Consensus 868 IvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~ 945 (1075)
|||+||||||||+++|+|+|+|++|+|.+||+|+++++ .+|++|+||||||++|+||||+||.++...
T Consensus 374 IvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~---------- 443 (582)
T PRK11176 374 LVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTE---------- 443 (582)
T ss_pred EECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCC----------
Confidence 99999999999999999999999999999999999873 567889999999999999999999975321
Q ss_pred cCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCC
Q 001446 946 HGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATS 1024 (1075)
Q Consensus 946 ~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD 1024 (1075)
...|++++++++.++++++++++|+|+||.+ ++|.+||||||||||||||++|+|+|||||||||+||
T Consensus 444 -----------~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ililDEptsaLD 512 (582)
T PRK11176 444 -----------QYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALD 512 (582)
T ss_pred -----------CCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCC
Confidence 1246677888888899999999999999976 6788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1025 VDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1025 ~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
.++|..+.+.+.. .++|+|+||||+++++.+|+++++++|.
T Consensus 513 ~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~ 555 (582)
T PRK11176 513 TESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGE 555 (582)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCE
Confidence 9999998887754 5899999999999999999999998765
No 46
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=5.4e-58 Score=559.98 Aligned_cols=191 Identities=21% Similarity=0.237 Sum_probs=152.8
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEc
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 915 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~Vp 915 (1075)
-|+++||++.|++ .++|+|+||+|++|+++||+||||||||||+++|.|+++|++|+|.+ |.+ .+|+|++
T Consensus 319 ~l~~~~l~~~~~~-~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~--------~~i~y~~ 388 (635)
T PRK11147 319 VFEMENVNYQIDG-KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTK--------LEVAYFD 388 (635)
T ss_pred eEEEeeeEEEECC-eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCC--------cEEEEEe
Confidence 4899999999964 56999999999999999999999999999999999999999999998 432 2599999
Q ss_pred CCC-CCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchh-hhhhhccCCccccccccC
Q 001446 916 QRP-YTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSY-LLEREEVGWDANLNWEDI 992 (1075)
Q Consensus 916 QdP-~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~-~i~~~~~Gldt~~~~g~~ 992 (1075)
|++ .+++ -|+++|+.++..... ....+..+.+.++.+++.. .. +.. ...
T Consensus 389 q~~~~l~~~~tv~e~l~~~~~~~~------------------~~~~~~~~~~~l~~~~l~~~~~-------~~~---~~~ 440 (635)
T PRK11147 389 QHRAELDPEKTVMDNLAEGKQEVM------------------VNGRPRHVLGYLQDFLFHPKRA-------MTP---VKA 440 (635)
T ss_pred CcccccCCCCCHHHHHHhhccccc------------------ccchHHHHHHHHHhcCCCHHHH-------hCh---hhh
Confidence 986 3655 499999975321000 0001233455666665521 11 111 246
Q ss_pred CChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHhcCceEEEecCCCCch-hhccceEEEE-cC
Q 001446 993 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALI-PFHSLELRLI-DG 1064 (1075)
Q Consensus 993 LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~~~~TvI~IaHRls~i-~~~~~~l~l~-~g 1064 (1075)
||||||||++||||++++|++|||||||++||..+...+.+.++..+.|||+|+|++..+ .++|+++.+. +|
T Consensus 441 LSgGekqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vSHd~~~~~~~~d~i~~l~~~g 514 (635)
T PRK11147 441 LSGGERNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSYQGTVLLVSHDRQFVDNTVTECWIFEGNG 514 (635)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCCCeEEEEECCHHHHHHhcCEEEEEeCCC
Confidence 999999999999999999999999999999999999999998877677999999999866 5899999995 44
No 47
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-57 Score=502.79 Aligned_cols=422 Identities=20% Similarity=0.224 Sum_probs=278.5
Q ss_pred CCCCcchhHHHHHHHHHHHHHHhhhhhHhHHHH-------HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccc
Q 001446 594 SIDADQRITHDLEKLTTDLSGLVTGMVKPSVDI-------LWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDL 666 (1075)
Q Consensus 594 ~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (1075)
.++..+|+..|++.++..+.-++...+..++.+ .+++|.+++..+.. +.+..+++...+++.- ...
T Consensus 114 ~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~Alll~~~---ll~~lli~P~~~~~~~----~~~ 186 (573)
T COG4987 114 SGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALLLGLI---LLLLLLIIPTLFYRAG----RKF 186 (573)
T ss_pred hHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHH---HHHHHHHHHHHHHHhh----hhh
Confidence 467899999999999988766655544433332 23444444332111 1111111111111111 112
Q ss_pred cHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHH
Q 001446 667 TSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSL 746 (1075)
Q Consensus 667 ~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (1075)
..+..+..+.+|...............||+++..++.++..-....+..++..+...+......++. ..+..++.+
T Consensus 187 ~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~~~~a~~~l~~----g~~v~~~l~ 262 (573)
T COG4987 187 GAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTGLSDAILLLIA----GLLVIGLLL 262 (573)
T ss_pred hHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHH
Confidence 2222333334444444443444556677776655444433333333322222222222222212111 112222233
Q ss_pred HHHHhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCcc
Q 001446 747 LYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDIL-ELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQ 825 (1075)
Q Consensus 747 ~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~ 825 (1075)
|.+.....+.. ..+ ......+ ++...+.+|..+. ..+....+...|+.|+.++.+.+++...+ .
T Consensus 263 w~a~~~~~G~~--~~~--~aa~~ll---~~f~~~eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e~~~~-----~--- 327 (573)
T COG4987 263 WMAAQVGAGAL--AQP--GAALALL---VIFAALEAFEPLAPGAFQHLGQVIASARRLNDILDQKPEVTFP-----D--- 327 (573)
T ss_pred HHHhcCcCCCc--chh--HHHHHHH---HHHHHHHHHhhhcchhHHHhhHHHHHHHHHhhhccCCcccCCC-----c---
Confidence 33332111100 000 0111111 1122233344444 44455666667788888876543332211 0
Q ss_pred CcCCCCCCCCceEEeeeeeeCCCc-cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc
Q 001446 826 HKWNSTDYQDSISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE 904 (1075)
Q Consensus 826 ~~w~~~~~~g~I~f~~V~~~yp~~-~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~ 904 (1075)
+..+.. ...++++||+|+||+. +++|+|+||++++||||||+|||||||||++++|.|-|+|++|+|..+|.+++.+
T Consensus 328 ~~~~~~--~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~~~~~l 405 (573)
T COG4987 328 EQTATT--GQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGVEIASL 405 (573)
T ss_pred cccCCc--cceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeECCcChhhC
Confidence 001111 1279999999999985 4899999999999999999999999999999999999999999999999999999
Q ss_pred cC--CcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccC
Q 001446 905 AG--SGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVG 982 (1075)
Q Consensus 905 ~~--~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~G 982 (1075)
+. +|..|++++|+++||+||||+||.... ++.+|++++++++.|+|.++++..|+|
T Consensus 406 ~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~----------------------~~AsDEel~~aL~qvgL~~l~~~~p~g 463 (573)
T COG4987 406 DEQALRETISVLTQRVHLFSGTLRDNLRLAN----------------------PDASDEELWAALQQVGLEKLLESAPDG 463 (573)
T ss_pred ChhhHHHHHhhhccchHHHHHHHHHHHhhcC----------------------CCCCHHHHHHHHHHcCHHHHHHhChhh
Confidence 54 788999999999999999999997422 234688899999999999999999999
Q ss_pred Ccccc-ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceE
Q 001446 983 WDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLEL 1059 (1075)
Q Consensus 983 ldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l 1059 (1075)
|+|.+ +.|..|||||||||||||+||++.+|+||||||.+||.+||++|.+.+.+ +|+|+|+|+||+...+..|+++
T Consensus 464 l~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~drIi 543 (573)
T COG4987 464 LNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMDRII 543 (573)
T ss_pred hhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcCEEE
Confidence 99986 67899999999999999999999999999999999999999999887754 6999999999999999999999
Q ss_pred EEEcCC
Q 001446 1060 RLIDGE 1065 (1075)
Q Consensus 1060 ~l~~g~ 1065 (1075)
++++|+
T Consensus 544 vl~~Gk 549 (573)
T COG4987 544 VLDNGK 549 (573)
T ss_pred EEECCe
Confidence 998884
No 48
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=3.7e-56 Score=574.73 Aligned_cols=199 Identities=20% Similarity=0.237 Sum_probs=171.8
Q ss_pred ccEEEEeEEEEcC-CCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----ccccccEE
Q 001446 180 NYIEFSGVKVVTP-TGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIF 253 (1075)
Q Consensus 180 ~~i~~~~v~~~~~-~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~ 253 (1075)
..|+++|+++.|+ +++++++|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.+ ...++.+|
T Consensus 927 ~~L~I~nLsK~y~~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~~~~~~r~~IG 1006 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIETNLDAVRQSLG 1006 (2272)
T ss_pred ceEEEEeEEEEecCCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcchHHHHhhcEE
Confidence 3689999999995 35789999999999999999999999999999999999999999999999964 13457899
Q ss_pred EEcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcC
Q 001446 254 YVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 332 (1075)
Q Consensus 254 ~v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~ 332 (1075)
||||++.++. .|++||+.++...........++++.++++.++|.+..++.+ .+|||||||||+|||||+.
T Consensus 1007 ~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~~v~~lL~~vgL~~~~~~~~--------~~LSGGqKQRLsLArALi~ 1078 (2272)
T TIGR01257 1007 MCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDTGLHHKRNEEA--------QDLSGGMQRKLSVAIAFVG 1078 (2272)
T ss_pred EEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHHHHHHHHHc
Confidence 9999998776 599999987533221111122356788999999998888766 6899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 333 KPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 333 ~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
+|+++||||||+|||+.+++.+++.+++ .|+|+|++||+++.+. .||+|++|++
T Consensus 1079 ~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~ 1135 (2272)
T TIGR01257 1079 DAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQ 1135 (2272)
T ss_pred CCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999998865 4899999999999885 6999999986
No 49
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.5e-57 Score=549.65 Aligned_cols=451 Identities=17% Similarity=0.194 Sum_probs=302.8
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHH-------
Q 001446 552 APSIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSV------- 624 (1075)
Q Consensus 552 ~~~~~~~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~------- 624 (1075)
.+....+..++..+.|..+++++++. +..+|+ ....++..+|+++|++.+...+...+..++..++
T Consensus 65 ~~~~~~~~~~~~~~lr~~l~~~l~~~---~~~~~~----~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~ 137 (529)
T TIGR02857 65 ERAAARAAAAVKSQLRERLLAAVAAL---GPGWLQ----GRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILA 137 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC---Cchhhc----cCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444555555666666666543 234443 2345678899999999988766554433333222
Q ss_pred HHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHH
Q 001446 625 DILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMI 704 (1075)
Q Consensus 625 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~ 704 (1075)
.++++.|.++++. ++..+ +...+.....+.......+.++..+.......+...+.++|+.|+.++.+.+.+
T Consensus 138 ~l~~~~~~l~~~~-------l~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~ 209 (529)
T TIGR02857 138 AVFPADWISGLIL-------LLTAP-LIPIFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAI 209 (529)
T ss_pred HHHHHhHHHHHHH-------HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHH
Confidence 2234455444331 11111 111111111222222223333333334444455556789999999988887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhh-cccchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 001446 705 ESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEH-KGDRALVSTQGELAHALRFLASVVSQSFLAF 783 (1075)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~ 783 (1075)
.+..++..+...+..+...+......++.... ..+..++.+... .+. .+.|.+.. +..+......++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~----~t~g~~~~----~~~~~~~~~~pl 277 (529)
T TIGR02857 210 ARSSEEYRERTMRVLRIAFLSSAVLELFATLS----VALVAVYIGFRLLAGD----LDLATGLF----VLLLAPEFYLPL 277 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHcCC----CCHHHHHH----HHHHHHHHHHHH
Confidence 66665555544333222222222222211110 001111111111 111 11222222 222334556677
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCCc-cccccccceeecC
Q 001446 784 GDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQ-KLLARQLTFEIVP 862 (1075)
Q Consensus 784 ~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~-~~vL~~vs~~I~~ 862 (1075)
..+......+.....+.+|+.++.+.+++.. . .. +.+.+ ..+.|+|+||+|+||+. +++|+|+||+|+|
T Consensus 278 ~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~--~---~~--~~~~~---~~~~i~~~~v~f~y~~~~~~il~~i~l~i~~ 347 (529)
T TIGR02857 278 RQLGADYHARADGVAAAEALFAVLDAPRPLA--G---KA--PVTAA---PAPSLEFSGLSVAYPGRRAPALRPVSFTVPP 347 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcccC--C---Cc--CCCCC---CCCeEEEEEEEEECCCCCcccccceeEEECC
Confidence 7888888888889999999999876321110 0 00 00111 13679999999999874 5899999999999
Q ss_pred CCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHH
Q 001446 863 GKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAEL 940 (1075)
Q Consensus 863 Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~ 940 (1075)
||++|||||||||||||+++|.|+|+|++|+|.+||.|++++ +.+|++++||||||++|+|||||||.++...
T Consensus 348 G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~----- 422 (529)
T TIGR02857 348 GERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWVPQHPFLFAGTIAENIRLARPD----- 422 (529)
T ss_pred CCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEEcCCCcccCcCHHHHHhccCCC-----
Confidence 999999999999999999999999999999999999999987 4568889999999999999999999875321
Q ss_pred HHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeEeecc
Q 001446 941 RALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDEC 1019 (1075)
Q Consensus 941 ~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEA 1019 (1075)
..|++++++++.++++++++++|+||||.+ ++|.+||||||||++||||++++|+|+|||||
T Consensus 423 -----------------~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~ililDE~ 485 (529)
T TIGR02857 423 -----------------ASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLLLDEP 485 (529)
T ss_pred -----------------CCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 235667778888899999999999999986 57899999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEE
Q 001446 1020 TNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRL 1061 (1075)
Q Consensus 1020 TSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l 1061 (1075)
||+||.++++.+++.+.+ .++|+|+||||+++++.+|+++++
T Consensus 486 ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 486 TAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred ccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999887765 589999999999999999999875
No 50
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=2.5e-57 Score=554.11 Aligned_cols=460 Identities=16% Similarity=0.214 Sum_probs=314.0
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHHHHHHHHHHHHH
Q 001446 556 RHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDILWFTWRMKA 635 (1075)
Q Consensus 556 ~~~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~~~~~~~~~l~~ 635 (1075)
.....+....+|..+++++++. +..+++ ....++..+|+++|++.+...+...+..++..++.++.+...++.
T Consensus 79 ~~~~~~~~~~lr~~l~~~~~~~---~~~~~~----~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~ 151 (571)
T TIGR02203 79 SWVSNKVVRDIRVRMFEKLLGL---PVSFFD----RQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLY 151 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC---CHHHhC----CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444555555555432 122332 234567889999999999888776655555444333322222222
Q ss_pred hhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHHHHHHHHHHHHH
Q 001446 636 LTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELLEHS 715 (1075)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~~~~~~~~~~~~ 715 (1075)
+.+...+. +++..++...+.....++......+.++..+.......+...+.++++.++.++.....+.+.+++..+..
T Consensus 152 ~~~~l~~i-~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~ 230 (571)
T TIGR02203 152 YSWQLTLI-VVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLA 230 (571)
T ss_pred HhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 22111111 11111222222223333334444444555555556666777788999999998877776666666655544
Q ss_pred HHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 716 LLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDILELHRKFVE 795 (1075)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (1075)
.+..+...+...+..++... ...+.++++....... ..+.|.+... ..++.....++..+......+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~~g--~lt~g~l~a~----~~~~~~~~~pl~~l~~~~~~~~~ 299 (571)
T TIGR02203 231 MKMTSAGSISSPITQLIASL-----ALAVVLFIALFQAQAG--SLTAGDFTAF----ITAMIALIRPLKSLTNVNAPMQR 299 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHcC--CCCHhHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 43333333222222222111 1111112211110000 0122333222 23345566788888888899999
Q ss_pred HhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCC-ccccccccceeecCCCeEEEEcCCCC
Q 001446 796 LSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGS 874 (1075)
Q Consensus 796 ~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~-~~~vL~~vs~~I~~Ge~vaIvG~SGs 874 (1075)
...+.+|+.++.+.+++.+.. .. ..+ ...+.|+|+||+|+||+ ++++|+|+||+|+|||+++|+|+|||
T Consensus 300 ~~~~~~ri~~~l~~~~~~~~~-----~~---~~~--~~~~~i~~~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGs 369 (571)
T TIGR02203 300 GLAAAESLFTLLDSPPEKDTG-----TR---AIE--RARGDVEFRNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGS 369 (571)
T ss_pred HHHHHHHHHHHHcCCCCCCCC-----CC---CCC--CCCCeEEEEEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCC
Confidence 999999999987643221110 00 011 12467999999999986 56899999999999999999999999
Q ss_pred cHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCccc
Q 001446 875 GKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKL 952 (1075)
Q Consensus 875 GKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~ 952 (1075)
|||||+++|.|+|+|++|+|.+||+|++.+ +.+|++++||||+|++|+|||||||.++...
T Consensus 370 GKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~----------------- 432 (571)
T TIGR02203 370 GKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTE----------------- 432 (571)
T ss_pred CHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCC-----------------
Confidence 999999999999999999999999999987 4567889999999999999999999976320
Q ss_pred ccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHH
Q 001446 953 VDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQL 1031 (1075)
Q Consensus 953 ~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i 1031 (1075)
+..|++++++++.+++++++.++|+|+||.+ ++|.+||||||||||||||++++|+|+|||||||+||.++++.+
T Consensus 433 ----~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i 508 (571)
T TIGR02203 433 ----QADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLV 508 (571)
T ss_pred ----CCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHH
Confidence 1346678888899999999999999999986 67899999999999999999999999999999999999999999
Q ss_pred HHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1032 YRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1032 ~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
.+.++. +++|+|+||||++..+++|+++++++|.
T Consensus 509 ~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~ 544 (571)
T TIGR02203 509 QAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGR 544 (571)
T ss_pred HHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCE
Confidence 887754 5899999999999999999999997664
No 51
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3e-57 Score=553.94 Aligned_cols=445 Identities=17% Similarity=0.191 Sum_probs=297.3
Q ss_pred HHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHHHHH-------HHHHH
Q 001446 560 ARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDIL-------WFTWR 632 (1075)
Q Consensus 560 ~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~~~~-------~~~~~ 632 (1075)
.+.....|..+++++++. +..+|+ ....++..+|+++|++.+...+...+..++..++.++ ++.|.
T Consensus 94 ~~~~~~lr~~l~~~l~~~---~~~~~~----~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (592)
T PRK10790 94 VGVVQQLRTDVMDAALRQ---PLSAFD----TQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWR 166 (592)
T ss_pred HHHHHHHHHHHHHHHHcC---CHHHhC----CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344455555554432 123443 3345778899999999998877665555444433322 23344
Q ss_pred HHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHHHHHHHHHH
Q 001446 633 MKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELL 712 (1075)
Q Consensus 633 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~~~~~~~~~ 712 (1075)
++++. ++..++. ........+.......+.++..+.......+...+.++++.|+.++.....+.+..++..
T Consensus 167 l~li~-------l~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~ 238 (592)
T PRK10790 167 MALVA-------IMIFPAV-LVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHY 238 (592)
T ss_pred HHHHH-------HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 33221 1111111 111111111111222222222222333344555667899999987666555555444444
Q ss_pred HHHHHHHHHHHH-hhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 713 EHSLLLLKKKWL-FGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDILELHR 791 (1075)
Q Consensus 713 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 791 (1075)
+...+..+...+ ......++.. .+..++.++++....+. .+.|.+.. +..+...+..++..+.....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~----is~g~l~a----~~~~~~~~~~pl~~l~~~~~ 306 (592)
T PRK10790 239 MARMQTLRLDGFLLRPLLSLFSA----LILCGLLMLFGFSASGT----IEVGVLYA----FISYLGRLNEPLIELTTQQS 306 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHCCC----cCHHHHHH----HHHHHHHHHHHHHHHHHHHH
Confidence 332222221111 1111111110 01111111111111111 11222222 22334456677888888888
Q ss_pred HHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCCccccccccceeecCCCeEEEEcC
Q 001446 792 KFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGP 871 (1075)
Q Consensus 792 ~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~ 871 (1075)
.+.+...+.+|+.++.+.+++... . . ..++ ..+.|+|+||+|+||+++++|+|+||+|+|||++||||+
T Consensus 307 ~~~~~~~s~~ri~~~l~~~~~~~~----~-~---~~~~---~~~~i~~~~v~f~y~~~~~il~~i~l~i~~Ge~iaIvG~ 375 (592)
T PRK10790 307 MLQQAVVAGERVFELMDGPRQQYG----N-D---DRPL---QSGRIDIDNVSFAYRDDNLVLQNINLSVPSRGFVALVGH 375 (592)
T ss_pred HHHHHHHHHHHHHHHhcCCCccCC----C-C---ccCC---CCCeEEEEEEEEEeCCCCceeeceeEEEcCCCEEEEECC
Confidence 889999999999998764321110 0 0 0111 246799999999998767899999999999999999999
Q ss_pred CCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCC
Q 001446 872 NGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKG 949 (1075)
Q Consensus 872 SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~ 949 (1075)
||||||||+++|.|+|+|++|+|.+||.|++++ +.+|++|+||||||+||+||||+||.++.+
T Consensus 376 SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~--------------- 440 (592)
T PRK10790 376 TGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRD--------------- 440 (592)
T ss_pred CCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCCC---------------
Confidence 999999999999999999999999999999987 357889999999999999999999997532
Q ss_pred cccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHH
Q 001446 950 EKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVE 1028 (1075)
Q Consensus 950 ~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e 1028 (1075)
..|++++++++.++++++++.+|+||||.+ +.|.+||||||||||||||++++|+|||||||||+||.+++
T Consensus 441 --------~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~ 512 (592)
T PRK10790 441 --------ISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTE 512 (592)
T ss_pred --------CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHH
Confidence 235667788889999999999999999986 57889999999999999999999999999999999999999
Q ss_pred HHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1029 EQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1029 ~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
+.|.+.++. .++|+|+||||+++++..|++++|++|.
T Consensus 513 ~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~ 551 (592)
T PRK10790 513 QAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQ 551 (592)
T ss_pred HHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCE
Confidence 999887754 5899999999999999999999998775
No 52
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1.3e-56 Score=547.42 Aligned_cols=457 Identities=17% Similarity=0.217 Sum_probs=301.1
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhccCC-ceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHHHH------
Q 001446 554 SIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDI------ 626 (1075)
Q Consensus 554 ~~~~~~~~~~~~~r~~l~~~ll~~~l~~~-~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~~~------ 626 (1075)
....+..+...+++.++...+++..++.+ .+|+ ..+.++..+|+++|++.+...+...+..++..++..
T Consensus 75 ~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~----~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (588)
T PRK13657 75 LVARHADRLAHRRRLAVLTEYFERIIQLPLAWHS----QRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPL 150 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHC----cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444445555544444554444432 3443 234567889999999988765544443333322221
Q ss_pred -HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHHH
Q 001446 627 -LWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIE 705 (1075)
Q Consensus 627 -~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~~ 705 (1075)
++++|.++++. +++ +++...+.....+.......+.++..+.+.....+...+.++++.|+.++.+...+.
T Consensus 151 ~~~~~~~l~l~~-------l~~-~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~ 222 (588)
T PRK13657 151 ALFMNWRLSLVL-------VVL-GIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALR 222 (588)
T ss_pred HHHHHHHHHHHH-------HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHH
Confidence 23344433221 111 111111122222222222333333333444444555567789999999888777776
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhh--cccchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 001446 706 SRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEH--KGDRALVSTQGELAHALRFLASVVSQSFLAF 783 (1075)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~ 783 (1075)
+...+..+...+......+...+..++.. +...+.++++... .+. .+.|.+...+ .+...++.++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~v~~g~----lt~g~~~a~~----~l~~~~~~~l 289 (588)
T PRK13657 223 DIADNLLAAQMPVLSWWALASVLNRAAST-----ITMLAILVLGAALVQKGQ----LRVGEVVAFV----GFATLLIGRL 289 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHcCC----cCHHHHHHHH----HHHHHHHHHH
Confidence 66666655443332222112222111111 1111112222111 111 1223333222 2234455667
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCCccccccccceeecCC
Q 001446 784 GDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQLTFEIVPG 863 (1075)
Q Consensus 784 ~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~~~vL~~vs~~I~~G 863 (1075)
..+......+.....+++|+.++.+.+++.+.. ... ..++ ...+.|+|+||+|.||+.+++|+|+||+|+||
T Consensus 290 ~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~----~~~--~~~~--~~~~~I~~~~vsf~y~~~~~iL~~inl~i~~G 361 (588)
T PRK13657 290 DQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDP----PGA--IDLG--RVKGAVEFDDVSFSYDNSRQGVEDVSFEAKPG 361 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC----CCC--CCcC--CCCCeEEEEEEEEEeCCCCceecceeEEECCC
Confidence 777777777777777778877775432211110 000 0111 12467999999999987678999999999999
Q ss_pred CeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHH
Q 001446 864 KSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELR 941 (1075)
Q Consensus 864 e~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~ 941 (1075)
|+++|||+||||||||+++|.|+|+|++|+|.+||.|+++++ .+|++|+||||||+||+|||||||.++..
T Consensus 362 ~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~------- 434 (588)
T PRK13657 362 QTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRP------- 434 (588)
T ss_pred CEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCC-------
Confidence 999999999999999999999999999999999999999883 56788999999999999999999997532
Q ss_pred HhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeEeeccC
Q 001446 942 ALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECT 1020 (1075)
Q Consensus 942 a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEAT 1020 (1075)
+..|++++++++.+++.+++.++|+|+||.+ ++|.+||||||||||||||++++|+||||||||
T Consensus 435 ---------------~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~~~iliLDEpt 499 (588)
T PRK13657 435 ---------------DATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKDPPILILDEAT 499 (588)
T ss_pred ---------------CCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 1236667788888899999999999999975 678899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1021 NATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1021 SalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
|+||.++++.+.+.++. .++|+|+||||++.++.+|+++.+++|.
T Consensus 500 s~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~ 546 (588)
T PRK13657 500 SALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGR 546 (588)
T ss_pred cCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCE
Confidence 99999999999887754 4899999999999999999999998775
No 53
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.9e-56 Score=499.25 Aligned_cols=474 Identities=18% Similarity=0.243 Sum_probs=319.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHH----H
Q 001446 538 IGVSVLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDL----S 613 (1075)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l----~ 613 (1075)
++..++..++..++......+..+.+...+..+.+.+++...+..+-+. .....+...+.+++-++.+...+ |
T Consensus 43 ~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp~~~---~~~~~g~~atl~~egve~l~~Y~~ryLP 119 (559)
T COG4988 43 LILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGPAFI---AQKPAGSAATLALEGIEQLEPYYARYLP 119 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhh---cCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334444555555555556666666666666666665554322111 11233455677777777765554 4
Q ss_pred HHhhhhhHhHHH---HHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHH-HhhchhhhhHHHHHHHhhH
Q 001446 614 GLVTGMVKPSVD---ILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSRE-QQLEGTFRFMHERLRAHAE 689 (1075)
Q Consensus 614 ~~~~~~i~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~~~~~ 689 (1075)
..+..++.+++. ++++.|.-+++. .++.+.+++....+-... ...+.++ ..+......++.+++ ..+
T Consensus 120 q~~~~~ivp~~i~i~v~~~~w~aalIl-----lit~PlIPlfMilvg~~a---~~~s~~~~~~~~~ls~~FLD~Lr-GL~ 190 (559)
T COG4988 120 QMFLSAIVPLLILIAIFFFNWAAALIL-----LITAPLIPLFMILVGLAA---KDASEKQFSALARLSGHFLDRLR-GLE 190 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHH-----HHHHHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHhc-ChH
Confidence 444444544433 356777766552 122222222222211111 1111111 111111123334443 568
Q ss_pred HhhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHH-HHhhcccchhhhhhhHHHHH
Q 001446 690 SVAFFGGGAREKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLY-AMEHKGDRALVSTQGELAHA 768 (1075)
Q Consensus 690 ~i~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~ 768 (1075)
|+++|+..+.+.+.+.+.-+++.+..+...+...+.....+|++... .+++.+| +..+.+. |.+..+
T Consensus 191 TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~ls-----iAlvAv~~g~~ll~~-------G~ltl~ 258 (559)
T COG4988 191 TLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLS-----IALVAVYIGFRLLGE-------GDLTLF 258 (559)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHcc-------CCccHH
Confidence 99999998887777766666666666666666666555555554322 2222222 2222110 111111
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCC
Q 001446 769 LRF-LASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITP 847 (1075)
Q Consensus 769 l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp 847 (1075)
..+ +....-..+.++.++...+..-....++.+.++.+.+.+....+... .....|. ...+|.++|++|.||
T Consensus 259 ~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~----~~~~~~~---~~~ei~~~~l~~~y~ 331 (559)
T COG4988 259 AGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGE----KAEVANE---PPIEISLENLSFRYP 331 (559)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCcc----ccccccC---CCceeeecceEEecC
Confidence 111 11122345678888888888877777889999998764432211110 0011121 134566669999999
Q ss_pred CccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEEEEcCCCCCCCcch
Q 001446 848 SQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFYVPQRPYTCLGTL 925 (1075)
Q Consensus 848 ~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~~VpQdP~Lf~gTi 925 (1075)
+++++++|+||+++||+++||||+||||||||+++|.||.+|++|+|.+||+|+++++ .+|+++++|||+||+|.|||
T Consensus 332 ~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTi 411 (559)
T COG4988 332 DGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTI 411 (559)
T ss_pred CCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccH
Confidence 9889999999999999999999999999999999999999999999999999999983 57889999999999999999
Q ss_pred hhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHH
Q 001446 926 RDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMA 1004 (1075)
Q Consensus 926 r~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiA 1004 (1075)
||||.+... +.+|+++.++++.++|+++++. |+|+||.+ ++|.+|||||+||+++|
T Consensus 412 reNi~l~~~----------------------~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLA 468 (559)
T COG4988 412 RENILLARP----------------------DASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALA 468 (559)
T ss_pred HHHhhccCC----------------------cCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHH
Confidence 999986432 1346778888899999999998 99999986 68899999999999999
Q ss_pred HHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1005 RLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1005 RAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
||+++++++++||||||+||.|+|+.|.+.+.+ +++|||+||||+..++-.|+++++++|.
T Consensus 469 RAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~ 531 (559)
T COG4988 469 RALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGR 531 (559)
T ss_pred HHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCc
Confidence 999999999999999999999999998877654 5899999999999999999999998775
No 54
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=1.6e-57 Score=553.52 Aligned_cols=193 Identities=23% Similarity=0.266 Sum_probs=151.4
Q ss_pred CceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEE
Q 001446 835 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYV 914 (1075)
Q Consensus 835 g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~V 914 (1075)
.-|+++||++.|++.+++|+|+||+|++||+++|+||||||||||+++|.|+.+|++|+|.+++. .+|+|+
T Consensus 507 ~~L~~~~ls~~y~~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~~---------~~igyv 577 (718)
T PLN03073 507 PIISFSDASFGYPGGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSAK---------VRMAVF 577 (718)
T ss_pred ceEEEEeeEEEeCCCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECCc---------eeEEEE
Confidence 35999999999976667999999999999999999999999999999999999999999998752 469999
Q ss_pred cCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchh-hhhhhccCCccccccccCC
Q 001446 915 PQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSY-LLEREEVGWDANLNWEDIL 993 (1075)
Q Consensus 915 pQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~-~i~~~~~Gldt~~~~g~~L 993 (1075)
||++. ..-++.+|.... .... .+...++.+.++|+.+++.. .... ....|
T Consensus 578 ~Q~~~-~~l~~~~~~~~~---------~~~~---------~~~~~~~~i~~~L~~~gl~~~~~~~----------~~~~L 628 (718)
T PLN03073 578 SQHHV-DGLDLSSNPLLY---------MMRC---------FPGVPEQKLRAHLGSFGVTGNLALQ----------PMYTL 628 (718)
T ss_pred ecccc-ccCCcchhHHHH---------HHHh---------cCCCCHHHHHHHHHHCCCChHHhcC----------Ccccc
Confidence 99973 222444443210 0000 01122455677788877742 1111 13579
Q ss_pred ChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHhcCceEEEecCCCCchh-hccceEEEEcCC
Q 001446 994 SLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIP-FHSLELRLIDGE 1065 (1075)
Q Consensus 994 SgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~~~~TvI~IaHRls~i~-~~~~~l~l~~g~ 1065 (1075)
|||||||++||||++++|++|||||||++||.++...+.+.+...+.|+|+|+|++..+. +.|+++.|.+|.
T Consensus 629 SgGqkqRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~~gtvIivSHd~~~i~~~~drv~~l~~G~ 701 (718)
T PLN03073 629 SGGQKSRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLFQGGVLMVSHDEHLISGSVDELWVVSEGK 701 (718)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999988887777654559999999998665 789999997653
No 55
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-57 Score=486.45 Aligned_cols=260 Identities=22% Similarity=0.297 Sum_probs=217.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCCcccccc
Q 001446 775 VVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLAR 854 (1075)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~~~vL~ 854 (1075)
.+.+...+++-+...+.++.+...-.++.+++.+.+.+.... ...|+-|| ...|.|.|+||+|.|...+|+|+
T Consensus 208 ll~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~d~-----pda~~L~~--~~~g~v~F~~V~F~y~~~r~iL~ 280 (497)
T COG5265 208 LLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVSDA-----PDAPPLWP--VRLGAVAFINVSFAYDPRRPILN 280 (497)
T ss_pred HHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhccC-----CCCccccc--cccceEEEEEEEeeccccchhhc
Confidence 334555566666667777777667777777776654433221 12234565 34789999999999988899999
Q ss_pred ccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhhhhcCC
Q 001446 855 QLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYP 932 (1075)
Q Consensus 855 ~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~NL~~p 932 (1075)
|+||++++|+++||||+||+||||+.++|+||||+++|.|.|||+||+.+ +.+|+.||+||||.+||++|+..|+.|+
T Consensus 281 ~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~yg 360 (497)
T COG5265 281 GISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYG 360 (497)
T ss_pred CccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999987 5678889999999999999999999995
Q ss_pred C--ChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhc
Q 001446 933 L--SREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFH 1009 (1075)
Q Consensus 933 ~--~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr 1009 (1075)
. .++++.+.|+ +...+.++++.+|+||||.+ +.|--||||||||+||||++|+
T Consensus 361 r~~at~eev~aaa------------------------~~aqi~~fi~~lP~gy~t~VgerglklSggekqrvaiar~ilk 416 (497)
T COG5265 361 RPDATAEEVGAAA------------------------EAAQIHDFIQSLPEGYDTGVGERGLKLSGGEKQRVAIARTILK 416 (497)
T ss_pred CccccHHHHHHHH------------------------HHhhhhHHHHhCchhhhcccchheeeccCchHHHHHHHHHHhc
Confidence 4 3344444444 44445566777789999976 6778899999999999999999
Q ss_pred CCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1010 KPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1010 ~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
+|+||+|||||||||..||++||..+++ .|+|.++|||||+|+-.+|.+++|++|.
T Consensus 417 ~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~ 474 (497)
T COG5265 417 NPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGR 474 (497)
T ss_pred CCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCE
Confidence 9999999999999999999999998865 6999999999999999999999998875
No 56
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.3e-55 Score=547.89 Aligned_cols=456 Identities=16% Similarity=0.206 Sum_probs=308.4
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHH-------
Q 001446 552 APSIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSV------- 624 (1075)
Q Consensus 552 ~~~~~~~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~------- 624 (1075)
.+....+..++...+|..+++++++. +..||+ ....++..+|+ +|++.+...+...+..++..++
T Consensus 200 ~~~~~~~~~~~~~~l~~~~~~~l~~l---~~~~f~----~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~ 271 (694)
T TIGR01846 200 TYLFAHLTSRIDVELGARLYRHLLGL---PLGYFE----SRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLA 271 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC---CHHHcC----CCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445555555666666666542 234444 23456778898 6998888776554433332222
Q ss_pred HHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHH
Q 001446 625 DILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMI 704 (1075)
Q Consensus 625 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~ 704 (1075)
.+++++|.++++. + +.+++...+.....+.......+..+..+.......+...+.++|+.++.+..+.+.+
T Consensus 272 ~l~~~~~~l~li~-------l-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~ 343 (694)
T TIGR01846 272 VMFFYSPTLTGVV-------I-GSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRW 343 (694)
T ss_pred HHHHHHHHHHHHH-------H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHH
Confidence 2234455544332 1 1111111111111122222222323333334444455566789999999988887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 001446 705 ESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFG 784 (1075)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 784 (1075)
.+.+.+..+...+..+...+...+..++... ...+.++++....... ..+.|.+.. +.........++.
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-----~~~~il~~g~~lv~~g--~it~G~lia----~~~l~~~~~~pl~ 412 (694)
T TIGR01846 344 DRQLAAYVAASFRVTNLGNIAGQAIELIQKL-----TFAILLWFGAHLVIGG--ALSPGQLVA----FNMLAGRVTQPVL 412 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHhHHHHHHHHHcC--CCCHHHHHH----HHHHHHHHHHHHH
Confidence 7776666655443332222222222222111 1111222222111000 012233222 2234455667888
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCC-ccccccccceeecCC
Q 001446 785 DILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQLTFEIVPG 863 (1075)
Q Consensus 785 ~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~-~~~vL~~vs~~I~~G 863 (1075)
.+......+.+...+.+|+.++.+.+++.+.. .. ...+ ...|.|+|+||+|.||+ .+++|+|+||+|+||
T Consensus 413 ~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~-----~~--~~~~--~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G 483 (694)
T TIGR01846 413 RLAQLWQDFQQTGIALERLGDILNSPTEPRSA-----GL--AALP--ELRGAITFENIRFRYAPDSPEVLSNLNLDIKPG 483 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC-----CC--CCCC--CCCCeEEEEEEEEEcCCCCccccccceEEECCC
Confidence 88888999999999999999998654322110 00 0111 12578999999999975 467999999999999
Q ss_pred CeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHH
Q 001446 864 KSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELR 941 (1075)
Q Consensus 864 e~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~ 941 (1075)
|++||||+||||||||+++|.|+|+|++|+|.+||+|++++ +.+|+++++|||||++|+|||||||.++..
T Consensus 484 ~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~------- 556 (694)
T TIGR01846 484 EFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNP------- 556 (694)
T ss_pred CEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCC-------
Confidence 99999999999999999999999999999999999999987 357888999999999999999999987432
Q ss_pred HhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeEeeccC
Q 001446 942 ALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECT 1020 (1075)
Q Consensus 942 a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEAT 1020 (1075)
+.++++++++++.++++++++++|+||||.+ +.|.+||||||||+|||||++++|+||||||||
T Consensus 557 ---------------~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~lARall~~~~ililDEpt 621 (694)
T TIGR01846 557 ---------------GAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIARALVGNPRILIFDEAT 621 (694)
T ss_pred ---------------CCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCC
Confidence 1235667777788888888999999999986 578899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1021 NATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1021 SalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
|+||.++|+.+.+.+++ .++|+|+||||+++++..|+++++++|.
T Consensus 622 s~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~ 668 (694)
T TIGR01846 622 SALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQ 668 (694)
T ss_pred cCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCE
Confidence 99999999999887754 5899999999999999999999997764
No 57
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.1e-55 Score=539.81 Aligned_cols=456 Identities=17% Similarity=0.218 Sum_probs=312.0
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHHH-------
Q 001446 553 PSIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVD------- 625 (1075)
Q Consensus 553 ~~~~~~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~~------- 625 (1075)
+....+..++...+|..+++++++. +..+|+ ....++..+|+++|++.+...+...+..++..++.
T Consensus 80 ~~~~~~~~~~~~~lr~~l~~~l~~~---~~~~~~----~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 152 (576)
T TIGR02204 80 YLVTWLGERVVADIRRAVFAHLISL---SPSFFD----KNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIM 152 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC---CHHHHc----cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334445555556666666666643 223333 23346788999999999977765544443332222
Q ss_pred HHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHHH
Q 001446 626 ILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIE 705 (1075)
Q Consensus 626 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~~ 705 (1075)
++++.|.++++. + +..++.........+.......+.++..+.+.....+...+.++++.++.++.+...+.
T Consensus 153 ~~~~~~~l~~~~-------l-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~ 224 (576)
T TIGR02204 153 MFITSPKLTSLV-------L-LAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFG 224 (576)
T ss_pred HHHHhHHHHHHH-------H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHH
Confidence 223344443321 1 11111111122222333344444455555566666777778899999999888877777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhh--cccchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 001446 706 SRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEH--KGDRALVSTQGELAHALRFLASVVSQSFLAF 783 (1075)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~ 783 (1075)
+.+.+..+...+......+...+..++.. +..++.++++... .+. .+.|.+.. +..+......++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~v~~g~----lt~g~~~~----~~~~~~~~~~pl 291 (576)
T TIGR02204 225 GAVEKAYEAARQRIRTRALLTAIVIVLVF-----GAIVGVLWVGAHDVIAGK----MSAGTLGQ----FVFYAVMVAGSI 291 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHcCC----CCHHHHHH----HHHHHHHHHHHH
Confidence 76666665443332222111111111110 1111111111111 111 11222222 222334456678
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCCc--cccccccceeec
Q 001446 784 GDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQ--KLLARQLTFEIV 861 (1075)
Q Consensus 784 ~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~--~~vL~~vs~~I~ 861 (1075)
..+......+.+...+.+|+.++.+.+++.+... ...+.+++ ..+.|+|+||+|.||+. +++|+|+||+|+
T Consensus 292 ~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~----~~~~~~~~---~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~ 364 (576)
T TIGR02204 292 GTLSEVWGELQRAAGAAERLIELLQAEPDIKAPA----HPKTLPVP---LRGEIEFEQVNFAYPARPDQPALDGLNLTVR 364 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCC----CCccCCcC---CCceEEEEEEEEECCCCCCCccccceeEEec
Confidence 8888888888999999999999876432211110 00011122 24679999999999853 689999999999
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHH
Q 001446 862 PGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAE 939 (1075)
Q Consensus 862 ~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~ 939 (1075)
|||+++|+|+||||||||+++|.|+|+|++|+|.+||+|++++ ..+|++|+||||||++|+|||||||.++.+.
T Consensus 365 ~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~---- 440 (576)
T TIGR02204 365 PGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPD---- 440 (576)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCC----
Confidence 9999999999999999999999999999999999999999987 3467789999999999999999999976421
Q ss_pred HHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeEeec
Q 001446 940 LRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDE 1018 (1075)
Q Consensus 940 ~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDE 1018 (1075)
..|++++++++.+++.++++++|+|+||.+ ++|.+||||||||+|||||++++|+||||||
T Consensus 441 ------------------~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~laRal~~~~~ililDE 502 (576)
T TIGR02204 441 ------------------ATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAIARAILKDAPILLLDE 502 (576)
T ss_pred ------------------CCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHHHHHHHhCCCeEEEeC
Confidence 235667788888999889999999999986 5788999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1019 CTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1019 ATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
|||+||.++++.+.+.++. +++|+|+||||++.++.+|+++++++|.
T Consensus 503 pts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~ 551 (576)
T TIGR02204 503 ATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGR 551 (576)
T ss_pred cccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCE
Confidence 9999999999988877654 5899999999999999999999998775
No 58
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=8.4e-57 Score=538.57 Aligned_cols=182 Identities=25% Similarity=0.286 Sum_probs=152.0
Q ss_pred EEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEE-----------eCCcCc-----c---
Q 001446 187 VKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIA-----------KPGVGS-----D--- 247 (1075)
Q Consensus 187 v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~-----------~~~~~~-----~--- 247 (1075)
+++.|..+..+|++++ .+++|++++|+||||||||||+|+|+|+++|++|+|. ++|.+- .
T Consensus 79 ~~~~yg~~~~~L~~l~-~i~~Gev~gLvG~NGaGKSTLlkiL~G~l~p~~G~i~~~~~~~~~~~~~~G~~l~~~~~~~~~ 157 (590)
T PRK13409 79 PVHRYGVNGFKLYGLP-IPKEGKVTGILGPNGIGKTTAVKILSGELIPNLGDYEEEPSWDEVLKRFRGTELQNYFKKLYN 157 (590)
T ss_pred ceEEecCCceeEecCC-cCCCCCEEEEECCCCCCHHHHHHHHhCCccCCCccccCCCcHHHHHHHhCChHHHHHHHHHhc
Confidence 6677854457999999 9999999999999999999999999999999999997 777541 1
Q ss_pred ccccEEEEc----CCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHH
Q 001446 248 LNKEIFYVP----QRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQR 323 (1075)
Q Consensus 248 ~~~~i~~v~----Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqR 323 (1075)
.+.++++.+ |.|.++.+|++||+... ...+++.++++.+++.+..++.+ .+||||||||
T Consensus 158 ~~~~~~~~~q~~~~~p~~~~~tv~e~l~~~---------~~~~~~~~~l~~l~l~~~~~~~~--------~~LSgGe~qr 220 (590)
T PRK13409 158 GEIKVVHKPQYVDLIPKVFKGKVRELLKKV---------DERGKLDEVVERLGLENILDRDI--------SELSGGELQR 220 (590)
T ss_pred cCcceeecccchhhhhhhhcchHHHHHHhh---------hHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHH
Confidence 112345444 45666678999998642 12346788999999988777765 6899999999
Q ss_pred HHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 324 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 324 l~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
++|||||+++|+++||||||++||+....++.+.+++. |+|+|+||||++.+. .+|+++++.+
T Consensus 221 v~ia~al~~~p~lllLDEPts~LD~~~~~~l~~~i~~l~~g~tvIivsHd~~~l~~~~D~v~vl~~ 286 (590)
T PRK13409 221 VAIAAALLRDADFYFFDEPTSYLDIRQRLNVARLIRELAEGKYVLVVEHDLAVLDYLADNVHIAYG 286 (590)
T ss_pred HHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 99999999999999999999999999999998877654 899999999999885 6899999964
No 59
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=2.7e-55 Score=509.79 Aligned_cols=191 Identities=25% Similarity=0.362 Sum_probs=156.5
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCccccccEEEEcCCCC
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPY 260 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~~ 260 (1075)
.|.++|+++.| +++++|+|+||++.+|+++||||+||||||||||+|+|...|++|+|..++ .-+++|++|++.
T Consensus 3 ~i~~~~ls~~~-g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~-----~~~v~~l~Q~~~ 76 (530)
T COG0488 3 MITLENLSLAY-GDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPK-----GLRVGYLSQEPP 76 (530)
T ss_pred eEEEeeeEEee-CCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecC-----CceEEEeCCCCC
Confidence 58999999999 578999999999999999999999999999999999999999999999875 237999999998
Q ss_pred CCcC-CHHHHhcCCCCCCccc------------C------------------cCCHHHHHHHHHHcCChhHHhcCCCCcc
Q 001446 261 TAVG-TLRDQLIYPLTSDQEV------------E------------------PLTHGGMVELLKNVDLEYLLDRYPPEKE 309 (1075)
Q Consensus 261 ~~~~-tv~~ni~~~~~~~~~~------------~------------------~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 309 (1075)
.... ||.+.+..+....... . ...+.++..++..+++.+. ++
T Consensus 77 ~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~------ 149 (530)
T COG0488 77 LDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DR------ 149 (530)
T ss_pred cCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cC------
Confidence 8765 9999887654210000 0 0011233344444444433 22
Q ss_pred cCCCCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHhcCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 310 INWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 310 ~~~g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
...+||||||.|++|||||+.+||+|||||||++||.++..++.+.|++...|+|+||||..++. .|++|+.++.
T Consensus 150 --~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~~gtviiVSHDR~FLd~V~t~I~~ld~ 225 (530)
T COG0488 150 --PVSSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRYPGTVIVVSHDRYFLDNVATHILELDR 225 (530)
T ss_pred --chhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHhhheEEecC
Confidence 13689999999999999999999999999999999999999999999876449999999999996 6899999985
No 60
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1.3e-54 Score=526.60 Aligned_cols=463 Identities=15% Similarity=0.157 Sum_probs=304.8
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhccC-CceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHHHH--
Q 001446 550 FIAPSIRHLTARLALGWRIRMTQHLLKSYLRK-NSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDI-- 626 (1075)
Q Consensus 550 ~~~~~~~~~~~~~~~~~r~~l~~~ll~~~l~~-~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~~~-- 626 (1075)
+..+...++..+...+.+..+..++++..++. ..||+ ..+.++..+|+++|++.+...+...+..++..++.+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~l~~~~~~----~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~ 146 (585)
T TIGR01192 71 IAYVLVAREADRLAHGRRATLLTEAFGRIISMPLSWHQ----QRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFL 146 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhC----CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444455555555554445555555443 34554 234577889999999998766655544433333222
Q ss_pred -----HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHH
Q 001446 627 -----LWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREK 701 (1075)
Q Consensus 627 -----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~ 701 (1075)
++++|.++++. ++ .+++...+...+.+.......+.++..+.+.....+...+.++|+.|+.+..+.
T Consensus 147 ~~~~l~~~~~~l~li~-------l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~ 218 (585)
T TIGR01192 147 LIPTAFAMDWRLSIVL-------MV-LGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAET 218 (585)
T ss_pred HHHHHHHHHHHHHHHH-------HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHH
Confidence 34455554432 11 111111111222222222222222222333334445556788999999988887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHHHHH
Q 001446 702 AMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFL 781 (1075)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~ 781 (1075)
+.+.+..++..+...+..+...+...+..++.. +...+.++++....... ..+.|.+..+ ..+...+..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~g~~~v~~g--~it~g~l~a~----~~~~~~l~~ 287 (585)
T TIGR01192 219 SALKQFTNNLLSAQYPVLDWWALASGLNRMAST-----ISMMCILVIGTVLVIKG--ELSVGEVIAF----IGFANLLIG 287 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHcC--CCCHHHHHHH----HHHHHHHHH
Confidence 777666666554443333222222222111111 11111122221111000 0112332222 223334556
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCCccccccccceeec
Q 001446 782 AFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQLTFEIV 861 (1075)
Q Consensus 782 ~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~~~vL~~vs~~I~ 861 (1075)
++..+......+.+...+.+|+.++.+.+++.++. ..+..++ ...+.|+|+||+|.||+.+++|+|+||+|+
T Consensus 288 ~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~------~~~~~~~--~~~~~i~~~~v~~~y~~~~~~l~~i~~~i~ 359 (585)
T TIGR01192 288 RLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEP------ADAPELP--NVKGAVEFRHITFEFANSSQGVFDVSFEAK 359 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC------ccCCCCC--CCCCeEEEEEEEEECCCCCccccceeEEEc
Confidence 77777777777888888899998876543221110 0001122 124679999999999876679999999999
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHH
Q 001446 862 PGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAE 939 (1075)
Q Consensus 862 ~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~ 939 (1075)
+||++|||||||||||||+++|.|+|+|++|+|.+||.|+++++ .+|.++++|||||++|++|+||||.++...
T Consensus 360 ~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~---- 435 (585)
T TIGR01192 360 AGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREG---- 435 (585)
T ss_pred CCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCC----
Confidence 99999999999999999999999999999999999999998873 467789999999999999999999875321
Q ss_pred HHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeEeec
Q 001446 940 LRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDE 1018 (1075)
Q Consensus 940 ~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDE 1018 (1075)
..|++++++++.+++++++..+|+|+||.+ ++|.+|||||||||+|||||+++|+||||||
T Consensus 436 ------------------~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARall~~p~ililDE 497 (585)
T TIGR01192 436 ------------------ATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIARAILKNAPILVLDE 497 (585)
T ss_pred ------------------CCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 124455666677777778888899999976 5788999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1019 CTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1019 ATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
|||+||.++++.+.+.+.+ .++|+|+||||+++++.+|+++++++|.
T Consensus 498 pts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~ 546 (585)
T TIGR01192 498 ATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGR 546 (585)
T ss_pred CccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCE
Confidence 9999999999999887754 5899999999999999999999998775
No 61
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=7.2e-55 Score=528.36 Aligned_cols=450 Identities=16% Similarity=0.182 Sum_probs=298.0
Q ss_pred HHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHHH-------H-HHH
Q 001446 558 LTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVD-------I-LWF 629 (1075)
Q Consensus 558 ~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~~-------~-~~~ 629 (1075)
...+...++|..+++++++. +..+|+ ....+++.+|+++|++.+.......+..++..++. + +++
T Consensus 63 ~~~~~~~~lr~~l~~~ll~~---~~~~~~----~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (569)
T PRK10789 63 ASYQLAVELREDFYRQLSRQ---HPEFYL----RHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQI 135 (569)
T ss_pred HHHHHHHHHHHHHHHHHHcC---CHHHHc----CCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555666666666542 223443 23456788999999999875544333333322111 1 234
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHHHHHHH
Q 001446 630 TWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFR 709 (1075)
Q Consensus 630 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~~~~~~ 709 (1075)
+|.++++. ++.+++...+.....++......+.++..+.+.....+...+.++++.|+.++.+.+.+.+...
T Consensus 136 ~~~l~li~--------l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~ 207 (569)
T PRK10789 136 SWQLTLLA--------LLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAE 207 (569)
T ss_pred hHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHH
Confidence 55544332 1111111111222222222222233333333434445555678899999998887777766665
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 710 ELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDILEL 789 (1075)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~ 789 (1075)
+..+...+................ .+...+.++++........ .+.|.+..+ ..+......++..+...
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~g~~lv~~g~--lt~g~l~a~----~~~~~~~~~pl~~l~~~ 276 (569)
T PRK10789 208 DTGKKNMRVARIDARFDPTIYIAI-----GMANLLAIGGGSWMVVNGS--LTLGQLTSF----VMYLGLMIWPMLALAWM 276 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHcCC--cCHHHHHHH----HHHHHHHHHHHHHHHHH
Confidence 554443332221111111111111 0111111222211110000 112332222 22333455677777778
Q ss_pred HHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCC-ccccccccceeecCCCeEEE
Q 001446 790 HRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQLTFEIVPGKSLLV 868 (1075)
Q Consensus 790 ~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~-~~~vL~~vs~~I~~Ge~vaI 868 (1075)
...+.....+.+|+.++.+.+++.+.. .. ..+ ...+.|+|+||+|.||+ .+++|+|+||+|+|||+++|
T Consensus 277 ~~~~~~~~~a~~ri~~ll~~~~~~~~~----~~----~~~--~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~i 346 (569)
T PRK10789 277 FNIVERGSAAYSRIRAMLAEAPVVKDG----SE----PVP--EGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGI 346 (569)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcccCC----CC----CCC--CCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEE
Confidence 888888889999999987643221110 00 001 12468999999999986 46899999999999999999
Q ss_pred EcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhc
Q 001446 869 TGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLH 946 (1075)
Q Consensus 869 vG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~ 946 (1075)
|||||||||||+++|.|+|+|++|+|.+||.|++++ ..+|+++++|||+|++|+||||+||.++...
T Consensus 347 vG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~----------- 415 (569)
T PRK10789 347 CGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPD----------- 415 (569)
T ss_pred ECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCC-----------
Confidence 999999999999999999999999999999999877 3567889999999999999999999875321
Q ss_pred CCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCH
Q 001446 947 GKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSV 1025 (1075)
Q Consensus 947 ~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~ 1025 (1075)
..|++++++++.+++++.+.++|+|+||.+ ++|.+||||||||+|||||++++|+|||||||||+||.
T Consensus 416 -----------~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~ 484 (569)
T PRK10789 416 -----------ATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDG 484 (569)
T ss_pred -----------CCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCH
Confidence 235566677778888888888899999986 57889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1026 DVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1026 ~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
++++.+.+.++. .++|+|+|+||+++++.+|+++++++|.
T Consensus 485 ~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~ 526 (569)
T PRK10789 485 RTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGH 526 (569)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCE
Confidence 999998887754 5899999999999999999999997764
No 62
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.6e-54 Score=558.73 Aligned_cols=207 Identities=22% Similarity=0.273 Sum_probs=159.3
Q ss_pred ceEEeeeeeeCCC------------ccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCC--CCCeEecCCCCC
Q 001446 836 SISFSKLDIITPS------------QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPV--VSGSLTKPSQHI 901 (1075)
Q Consensus 836 ~I~f~~V~~~yp~------------~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~--~sG~I~idg~di 901 (1075)
.++|+||+++.+. ...+|+|||++|+|||.+||+||||||||||+++|.|..++ .+|+|.++|.++
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 6899999997541 23699999999999999999999999999999999999874 689999999887
Q ss_pred ccccCCcCcEEEEcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhc
Q 001446 902 DEEAGSGCGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREE 980 (1075)
Q Consensus 902 ~~~~~~r~~i~~VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~ 980 (1075)
+... .|..++||+|++.+++ .|++|||.++.. ++. ..... ....++.+.++++.++|.+..
T Consensus 947 ~~~~-~~~~igyv~Q~d~~~~~lTV~E~L~~~a~--------lr~---~~~~~--~~~~~~~v~~vl~~lgL~~~~---- 1008 (1470)
T PLN03140 947 KQET-FARISGYCEQNDIHSPQVTVRESLIYSAF--------LRL---PKEVS--KEEKMMFVDEVMELVELDNLK---- 1008 (1470)
T ss_pred ChHH-hhhheEEEccccccCCCCcHHHHHHHHHH--------hCC---CCCCC--HHHHHHHHHHHHHHCCChhHh----
Confidence 5432 3456999999998776 599999975310 000 00000 000123456677778775432
Q ss_pred cCCccccc--cccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCc--hh
Q 001446 981 VGWDANLN--WEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPAL--IP 1053 (1075)
Q Consensus 981 ~Gldt~~~--~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~--i~ 1053 (1075)
|+.+. ....||||||||++|||+|+.+|+||+||||||+||..+...+.+.+++ .|+|||+++|+++. .+
T Consensus 1009 ---~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~ 1085 (1470)
T PLN03140 1009 ---DAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFE 1085 (1470)
T ss_pred ---CCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHH
Confidence 33321 1246999999999999999999999999999999999998887776643 58999999999984 57
Q ss_pred hccceEEEEc
Q 001446 1054 FHSLELRLID 1063 (1075)
Q Consensus 1054 ~~~~~l~l~~ 1063 (1075)
..|+++.|.+
T Consensus 1086 ~~D~vllL~~ 1095 (1470)
T PLN03140 1086 AFDELLLMKR 1095 (1470)
T ss_pred hCCEEEEEcC
Confidence 8899999964
No 63
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.4e-53 Score=515.50 Aligned_cols=448 Identities=20% Similarity=0.236 Sum_probs=296.1
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHH-HhhhhhHhH------HHH
Q 001446 554 SIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSG-LVTGMVKPS------VDI 626 (1075)
Q Consensus 554 ~~~~~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~-~~~~~i~~~------~~~ 626 (1075)
....+..+.....|..+++++++..+. ..+...+++++|++.+...+.. .+..++..+ +.+
T Consensus 69 ~~~~~~~~~~~~lr~~~~~~ll~~~~~------------~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l 136 (544)
T TIGR01842 69 VLVRIGEKLDGALNQPIFAASFSATLR------------RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYLLVC 136 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccc------------CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 333344455555566666665543211 1123467889999998776544 222222221 122
Q ss_pred HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHHHH
Q 001446 627 LWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIES 706 (1075)
Q Consensus 627 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~~~ 706 (1075)
+++.|.++++. ++..++. ........+.......+.++..+.......+...+.++++.|+.++.+.+.+.+
T Consensus 137 ~~~~~~l~li~-------l~~~~l~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~ 208 (544)
T TIGR01842 137 FLLHPWIGILA-------LGGAVVL-VGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGR 208 (544)
T ss_pred HHHhhHHHHHH-------HHHHHHH-HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHH
Confidence 33444444321 1111111 111111111111222223333333444445556678999999998887777766
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 707 RFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDI 786 (1075)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~ 786 (1075)
.+++..+...+.............++.. +...+.++++....... ..+.|.+..+ ..+......++..+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~g~~l~~~g--~it~g~l~a~----~~~~~~~~~pl~~l 277 (544)
T TIGR01842 209 FHSKYLSAQSAASDRAGMLSNLSKYFRI-----VLQSLVLGLGAYLAIDG--EITPGMMIAG----SILVGRALAPIDGA 277 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHcC--CCCHHHHHHH----HHHHHHHHHHHHHH
Confidence 6666555443322222111111111110 01111122221111000 0122333222 22334556788888
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCC-ccccccccceeecCCCe
Q 001446 787 LELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQLTFEIVPGKS 865 (1075)
Q Consensus 787 ~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~-~~~vL~~vs~~I~~Ge~ 865 (1075)
......+.+...+.+|+.++.+.+++.++ .. ..+ ...+.|+|+||+|+||+ .+++|+|+||+|+|||+
T Consensus 278 ~~~~~~~~~~~~~~~ri~~~l~~~~~~~~-----~~----~~~--~~~~~i~~~~v~~~y~~~~~~~l~~~~~~i~~G~~ 346 (544)
T TIGR01842 278 IGGWKQFSGARQAYKRLNELLANYPSRDP-----AM----PLP--EPEGHLSVENVTIVPPGGKKPTLRGISFRLQAGEA 346 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCccccC-----CC----CCC--CCCCeEEEEEEEEEcCCCCccccccceEEEcCCCE
Confidence 88888889999999999999864322111 00 011 12467999999999986 46899999999999999
Q ss_pred EEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHh
Q 001446 866 LLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRAL 943 (1075)
Q Consensus 866 vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~ 943 (1075)
+|||||||||||||+++|.|+|+|++|+|.+||+|+++++ .+|+++++|||||++|+||+||||.+...
T Consensus 347 ~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~--------- 417 (544)
T TIGR01842 347 LAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYLPQDVELFPGTVAENIARFGE--------- 417 (544)
T ss_pred EEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEecCCcccccccHHHHHhccCC---------
Confidence 9999999999999999999999999999999999998873 46778999999999999999999985321
Q ss_pred hhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCC
Q 001446 944 KLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNA 1022 (1075)
Q Consensus 944 ~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSa 1022 (1075)
+..+++++++++.++++++++.+|+|+||.. ++|.+||||||||+|||||++++|+|||||||||+
T Consensus 418 -------------~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~~ililDEpts~ 484 (544)
T TIGR01842 418 -------------NADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVVLDEPNSN 484 (544)
T ss_pred -------------CCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccc
Confidence 0234556677778888888888999999976 57899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHh---cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1023 TSVDVEEQLYRLAKD---MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1023 lD~~~e~~i~~~~~~---~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
||.++++.+.+.+.+ .++|+|+|+||+++++.+|+++++++|.
T Consensus 485 LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~ 530 (544)
T TIGR01842 485 LDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGR 530 (544)
T ss_pred cCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCE
Confidence 999999998887654 4799999999999999999999997765
No 64
>KOG0060 consensus Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis) [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=3e-55 Score=484.69 Aligned_cols=389 Identities=45% Similarity=0.788 Sum_probs=333.5
Q ss_pred ccccCcchhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 2 MRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKY 81 (1075)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (1075)
.|.+.+++++++.+|+++|+|||+.|+++|+|+|+||||+|+..|+...+++|+++.++.++.+...+|++++++++- |
T Consensus 243 ~~~L~~pI~~l~~~qeklEGdfRy~h~rlr~NaE~iAFY~g~~~E~~~~~~~f~~Lv~~l~~l~~~r~~l~f~~n~~~-Y 321 (659)
T KOG0060|consen 243 NKTLRGPIVKLTVEQEKLEGDFRYKHSRLRVNAEEIAFYRGGQVEHQRTDQRFRNLVQHLRELMSFRFWLGFIDNIFD-Y 321 (659)
T ss_pred HhhhccchhHHHHHHHHhhcchhhheeeeeecchhhhhhccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 577889999999999999999999999999999999999999999999999999999999999999999999999887 9
Q ss_pred HHHHHHHHHHHhhhhccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 001446 82 LGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELS 161 (1075)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~ 161 (1075)
++.+++++++..|+|.++.. +..+ ...+...+.....+++.++++++.++..-..+.++.++.+|+.++++...+..
T Consensus 322 lg~ilsy~vi~~p~Fs~h~y-~~~s--~aEL~~~i~~na~~~i~Li~~f~~l~~~~~~ls~lsGyt~Ri~el~~~l~d~~ 398 (659)
T KOG0060|consen 322 LGGILSYVVIAIPFFSGHVY-DDLS--PAELSGLISNNAFVFIYLISAFGRLVDLSRDLSRLSGYTHRIGELMEVLDDLS 398 (659)
T ss_pred HHhhheeeEEeeeeeccccc-CCcC--HHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHHhc
Confidence 99999999999999998743 3322 23455566666778888899999999999999999999999999876654433
Q ss_pred ccCCC---------------CCCCCCCCCCCCCccEEEEeEEEEcCC-CCeeeeeceEEEeCCCEEEEEcCCcchHHHHH
Q 001446 162 IEDKS---------------PQRNGSRNYFSEANYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLF 225 (1075)
Q Consensus 162 ~~~~~---------------~~~~~~~~~~~~~~~i~~~~v~~~~~~-~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl 225 (1075)
....+ ....+..+..+.++.|++++|++..|+ +..+++|+||+|+.|+.+.|+||||||||+|+
T Consensus 399 ~~~~~~~~~~~~~~E~~~~l~~~~G~~~~~~~Dn~i~~e~v~l~tPt~g~~lie~Ls~~V~~g~~LLItG~sG~GKtSLl 478 (659)
T KOG0060|consen 399 SGSQECTMEEEELGEAEWGLSLPPGSGKAEPADNAIEFEEVSLSTPTNGDLLIENLSLEVPSGQNLLITGPSGCGKTSLL 478 (659)
T ss_pred cCCcchhhhhhhhhhhhhccCCCCCCcccccccceEEeeeeeecCCCCCceeeeeeeeEecCCCeEEEECCCCCchhHHH
Confidence 21100 001111222344578999999999998 66788899999999999999999999999999
Q ss_pred HHHhCCCCCCccEEEeCCcCccccccEEEEcCCCCCCcCCHHHHhcCCCCCCc-ccCcCCHHHHHHHHHHcCChhHHhcC
Q 001446 226 RVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQ-EVEPLTHGGMVELLKNVDLEYLLDRY 304 (1075)
Q Consensus 226 ~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~ 304 (1075)
|.+.|+|+..+|++..+.... .+.+.|+||.||+..||+||++.||..... ..+..+++++.+.|+.++|.++.++.
T Consensus 479 RvlggLWp~~~G~l~k~~~~~--~~~lfflPQrPYmt~GTLRdQvIYP~~~~~~~~~~~~d~~i~r~Le~v~L~hl~~r~ 556 (659)
T KOG0060|consen 479 RVLGGLWPSTGGKLTKPTDGG--PKDLFFLPQRPYMTLGTLRDQVIYPLKAEDMDSKSASDEDILRILENVQLGHLLERE 556 (659)
T ss_pred HHHhcccccCCCeEEecccCC--CCceEEecCCCCccccchhheeeccCccccccccCCCHHHHHHHHHHhhhhhHHHHh
Confidence 999999999999998865321 145999999999999999999999965433 23456788999999999999998885
Q ss_pred CC-C--cccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHhcCCeEEEEecChhhHhhCCeE
Q 001446 305 PP-E--KEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFHDVV 381 (1075)
Q Consensus 305 ~~-~--~~~~~g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~t~i~vtH~~~~~~~~d~i 381 (1075)
.. + .+.+|...||+|||||+++||.+|++|++.||||.|||+|.+.|..+++.+++.|+|.|.|+||.++.++||.+
T Consensus 557 ggld~~~~~dW~dvLS~GEqQRLa~ARLfy~kPk~AiLDE~TSAv~~dvE~~~Yr~~r~~giT~iSVgHRkSL~kfHd~~ 636 (659)
T KOG0060|consen 557 GGLDQQVDWDWMDVLSPGEQQRLAFARLFYHKPKFAILDECTSAVTEDVEGALYRKCREMGITFISVGHRKSLWKFHDYV 636 (659)
T ss_pred CCCCchhhccHHhhcCHHHHHHHHHHHHHhcCCceEEeechhhhccHHHHHHHHHHHHHcCCeEEEeccHHHHHhhhhEE
Confidence 42 2 23478999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCcEEEecCC
Q 001446 382 LSLDGEGEWRVHDKR 396 (1075)
Q Consensus 382 ~~l~~~g~~~~~~~~ 396 (1075)
+.|++.|+|.++.-+
T Consensus 637 L~~~g~g~w~~~~I~ 651 (659)
T KOG0060|consen 637 LRMDGRGSWRFHQID 651 (659)
T ss_pred EEecCCCceEEEEec
Confidence 999999999887544
No 65
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.3e-55 Score=497.86 Aligned_cols=370 Identities=24% Similarity=0.310 Sum_probs=282.0
Q ss_pred ccCcchhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 4 NFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLG 83 (1075)
Q Consensus 4 ~~~~~~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (1075)
.++....++..+.|+.-|+....-.....++.+|+.|++|+.|.+++.+..++..+-. ++......+..+....++
T Consensus 307 ~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~----~k~a~a~~~f~~~~~~~~ 382 (716)
T KOG0058|consen 307 IYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLS----KKEAVAYGIFFGSTNLLG 382 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHH----HHHHHHhhHhHhHHHHHH
Confidence 3444555566566666666655555666666669999999999986666655544332 222221111111111111
Q ss_pred HHHHHHHHHhhhhccccccCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 001446 84 ATVAVILIIEPFFAGNLKPDT-STLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSI 162 (1075)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~ 162 (1075)
.. ..+...|+++++..++ .+.|.. .+.+.+ -..+..++..+...+..+.+..++..|++++++..+....
T Consensus 383 ~~---~~~siL~~Gg~Lv~~g~mt~g~L--~sFllY----~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~ 453 (716)
T KOG0058|consen 383 NL---AVLSILFYGGHLVLTGSLTSGAL--SSFLLY----QVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPL 453 (716)
T ss_pred hH---HHHHHHHhccchhhcCccchhHH--HHHHHH----HHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCC
Confidence 11 1222336777776543 334432 222222 2234456677778888899999999999999998776644
Q ss_pred cCCCCCCCCCCCCCCCCccEEEEeEEEEcCCC--CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEE
Q 001446 163 EDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG--NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIA 240 (1075)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~--~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~ 240 (1075)
. ... .+..-.+.|+|+||+|.||.. .++|+|+||+|+|||++|+|||||+||||+.++|.++|+|++|+|.
T Consensus 454 ~-G~~------~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~Il 526 (716)
T KOG0058|consen 454 T-GTL------APDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRIL 526 (716)
T ss_pred C-Ccc------ccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEE
Confidence 2 110 011235689999999999964 4699999999999999999999999999999999999999999999
Q ss_pred eCCcC------ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---C
Q 001446 241 KPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---N 311 (1075)
Q Consensus 241 ~~~~~------~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~ 311 (1075)
+||.+ ..+|++||+|.|+|.+|++||+|||.||.. ..+++++..+.+.++.++++..+|++.++ +
T Consensus 527 lDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~------~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGE 600 (716)
T KOG0058|consen 527 LDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLD------NATDEEIEAAAKMANAHEFITNFPDGYNTVVGE 600 (716)
T ss_pred ECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCC------CCCHHHHHHHHHHhChHHHHHhCccccccccCC
Confidence 99986 346889999999999999999999999975 45788999999999999999999998765 5
Q ss_pred CCCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcCCCc
Q 001446 312 WGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGEGE 389 (1075)
Q Consensus 312 ~g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~g~ 389 (1075)
.|.+|||||||||||||||++||.||||||+|||||.+++..+.+.+.+ .++|||+|+|+++.++.+|+|+++++ |
T Consensus 601 kG~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~--G 678 (716)
T KOG0058|consen 601 KGSQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDK--G 678 (716)
T ss_pred ccccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcC--C
Confidence 6889999999999999999999999999999999999999999999864 48999999999999999999999986 3
Q ss_pred EEEecCCCCccc
Q 001446 390 WRVHDKRDGSSV 401 (1075)
Q Consensus 390 ~~~~~~~~~~~~ 401 (1075)
..++.+.|++++
T Consensus 679 ~V~E~G~h~eLl 690 (716)
T KOG0058|consen 679 RVVEMGTHDELL 690 (716)
T ss_pred eEEecccHHHHh
Confidence 456666666554
No 66
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=6.9e-53 Score=508.97 Aligned_cols=461 Identities=13% Similarity=0.112 Sum_probs=289.7
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhH---
Q 001446 547 ASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPS--- 623 (1075)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~--- 623 (1075)
+..+..+....+..+...++|.++++++++. +..||+ ....+++.+|+++|++.+...+.. +..++..+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~---~~~~~~----~~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~ 140 (555)
T TIGR01194 69 FRIGADIFPAYAGMHIIANLRIALCEKILGA---PIEEID----RRGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIF 140 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CHHHHH----hcCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHH
Confidence 3334444455556666677787777777652 223443 234577899999999998876543 22222222
Q ss_pred ----HHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHH
Q 001446 624 ----VDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAR 699 (1075)
Q Consensus 624 ----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~ 699 (1075)
+.+++++|.++++. + +.+++...+.....+.......+.++..+.+.....+...+.++++.|+.++.
T Consensus 141 ~~~~~~l~~~~~~L~li~-------l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~ 212 (555)
T TIGR01194 141 FFCIAYLAYLSVPMFAIT-------I-SAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRL 212 (555)
T ss_pred HHHHHHHHHHhHHHHHHH-------H-HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHH
Confidence 22234455554432 1 11111111111111111122222233333344444455556788888876321
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHH
Q 001446 700 EKAMIESRFRELLEHSLLLL-KKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQ 778 (1075)
Q Consensus 700 e~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~ 778 (1075)
. ...+++.+..+...+.. ...........+. .....+..++.++++... +. .+.|.+..+ ..+...
T Consensus 213 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~----~t~g~l~a~----~~~~~~ 279 (555)
T TIGR01194 213 S--FAHGAIQESANNIADLHIIEILIFIAAENFG--QLLFFLLIGCALFAAAMF-AS----IDAAAISAF----VLALLY 279 (555)
T ss_pred H--HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHh-cC----CCHHHHHHH----HHHHHH
Confidence 1 11223333332222111 1111111111100 000111112222222111 10 122332222 223345
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCCc----ccccc
Q 001446 779 SFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQ----KLLAR 854 (1075)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~----~~vL~ 854 (1075)
+..++..+......+.....+++|+.++.+.++++++............-+.....+.|+|+||+|+||+. +++|+
T Consensus 280 l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~ 359 (555)
T TIGR01194 280 IKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALG 359 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceec
Confidence 56788888888899999999999999997643221111000000000000001124679999999999852 36999
Q ss_pred ccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEEEEcCCCCCCCcchhhhhcCC
Q 001446 855 QLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFYVPQRPYTCLGTLRDQIIYP 932 (1075)
Q Consensus 855 ~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~~VpQdP~Lf~gTir~NL~~p 932 (1075)
|+||+|++||++|||||||||||||+++|.|+|+|++|+|.+||.|+++++ .+|.++++|||||++|++|+++|+. |
T Consensus 360 ~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~~-~ 438 (555)
T TIGR01194 360 PIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDEG-E 438 (555)
T ss_pred cceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhcccc-c
Confidence 999999999999999999999999999999999999999999999999873 4677899999999999999999963 3
Q ss_pred CChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCChhHHHHHHHHHHhhcCCC
Q 001446 933 LSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSLGEQQRLGMARLFFHKPK 1012 (1075)
Q Consensus 933 ~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ 1012 (1075)
... +++++++++.+++++.++.+|+||||. .+||||||||||||||++++|+
T Consensus 439 ~~~------------------------~~~~~~~~~~~~l~~~~~~lp~g~~t~----~~LSgGq~qRlalaRall~~~~ 490 (555)
T TIGR01194 439 HAS------------------------LDNAQQYLQRLEIADKVKIEDGGFSTT----TALSTGQQKRLALICAWLEDRP 490 (555)
T ss_pred chh------------------------HHHHHHHHHHcCCchhhcccccccCCc----ccCCHHHHHHHHHHHHHHcCCC
Confidence 222 344566777888888888889999985 5699999999999999999999
Q ss_pred EeEeeccCCCCCHHHHHHHHHHH-H---hcCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1013 FGILDECTNATSVDVEEQLYRLA-K---DMGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1013 ILiLDEATSalD~~~e~~i~~~~-~---~~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
|||||||||+||+++++.+++.+ + ..++|+|+||||+++++..|+++++++|.
T Consensus 491 ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~ 547 (555)
T TIGR01194 491 ILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGC 547 (555)
T ss_pred EEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCE
Confidence 99999999999999999887643 2 35899999999999999999999998764
No 67
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=2.6e-53 Score=486.95 Aligned_cols=364 Identities=31% Similarity=0.530 Sum_probs=307.0
Q ss_pred ccCcchhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 4 NFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLG 83 (1075)
Q Consensus 4 ~~~~~~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (1075)
+++|++.++|.+++++||+||+.|.|+|+|+|+||+|+||+.|+++++++|..+.+++++.+....++.+++..+.. ++
T Consensus 225 ~iGr~Li~LN~~~~~~EA~fR~~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~-~s 303 (604)
T COG4178 225 LIGRPLIRLNFERQKLEADFRYSLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGW-LS 303 (604)
T ss_pred HHccccccccHHHHHHHHHHHHHHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhH-HH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999888763 55
Q ss_pred HHHHHHHHHhhhhccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 001446 84 ATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIE 163 (1075)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~ 163 (1075)
.+++++...|.||.|.+. +|..+. ..+.|..+..+++.++..+.++..+++...|+.+|....+....+
T Consensus 304 ~v~P~li~ap~~f~g~i~-----~G~lmq------a~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~ 372 (604)
T COG4178 304 VVLPILIAAPRYFSGQIT-----FGGLMQ------AVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMD 372 (604)
T ss_pred HHHHHHhccHhhhcCcCh-----HHHHHH------HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 577777788889999884 443321 123455566777888888888888888888888876544321111
Q ss_pred CCCCCCCCCCCCCCC--CccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEe
Q 001446 164 DKSPQRNGSRNYFSE--ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAK 241 (1075)
Q Consensus 164 ~~~~~~~~~~~~~~~--~~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~ 241 (1075)
..............+ ...++++|+++..|++++.++++||++++||.+.|.||||||||||+|+|+|+||..+|+|.+
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~ 452 (604)
T COG4178 373 TEKPARTGRRIDFDDNADHGITLENLSLRTPDGQTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISM 452 (604)
T ss_pred ccccCcccccccccccccceeEEeeeeEECCCCCeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceec
Confidence 111110000000011 467999999999999899999999999999999999999999999999999999999999998
Q ss_pred CCcCccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHH
Q 001446 242 PGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQ 321 (1075)
Q Consensus 242 ~~~~~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqk 321 (1075)
+. ..++.|+||.||++.||+||.++||.... ..+++++.++|.+|+|.++.+++ +...+|...||+|||
T Consensus 453 P~-----~~~~lflpQ~PY~p~GtLre~l~YP~~~~----~~~d~~l~~vL~~vgL~~L~~rl--~~~~~W~~vLS~GEq 521 (604)
T COG4178 453 PA-----DSALLFLPQRPYLPQGTLREALCYPNAAP----DFSDAELVAVLHKVGLGDLAERL--DEEDRWDRVLSGGEQ 521 (604)
T ss_pred CC-----CCceEEecCCCCCCCccHHHHHhCCCCCC----CCChHHHHHHHHHcCcHHHHHHH--hccCcHhhhcChhHH
Confidence 84 24699999999999999999999997642 26788999999999999999984 445568899999999
Q ss_pred HHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcCCCcE
Q 001446 322 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGEGEW 390 (1075)
Q Consensus 322 qRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~ 390 (1075)
|||++||.++++|++++|||+|||||++++..+++.+++ .+.|+|.|+|+..+..+|++.+.+.+.+++
T Consensus 522 QRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~~~~~~ 592 (604)
T COG4178 522 QRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELLDDAGG 592 (604)
T ss_pred HHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeecccccc
Confidence 999999999999999999999999999999999999998 699999999999999999999998775543
No 68
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.6e-52 Score=545.40 Aligned_cols=488 Identities=14% Similarity=0.129 Sum_probs=313.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhh-----
Q 001446 545 SAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGM----- 619 (1075)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~----- 619 (1075)
+++..+..+++..+..+...++|..+++++++. +..||+.. ..+.+.+|++.|++.+...+...+..+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~---~~~~fd~~----~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~ 183 (1466)
T PTZ00265 111 FILSFISSFCMDVVTTKILKTLKLEFLKSVFYQ---DGQFHDNN----PGSKLTSDLDFYLEQVNAGIGTKFITIFTYAS 183 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CHHHHcCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444455556666777777777777776652 23566521 224567888888887665544333332
Q ss_pred --hHhHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCc
Q 001446 620 --VKPSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGG 697 (1075)
Q Consensus 620 --i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~ 697 (1075)
+..++..++++|+|+++... +++++++.. ....+.......+.++..+......++...+.++|++|+.+
T Consensus 184 ~~i~~~i~~~~~sw~Lalv~l~-----~~pl~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e 255 (1466)
T PTZ00265 184 AFLGLYIWSLFKNARLTLCITC-----VFPLIYICG---VICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGE 255 (1466)
T ss_pred HHHHHHHHHHHHhHHHHHHHHH-----HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccC
Confidence 33334445678888765311 111111111 11111222223333333344445566666788999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccch------hhhhhhHHHHHHHH
Q 001446 698 AREKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRA------LVSTQGELAHALRF 771 (1075)
Q Consensus 698 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~l~~ 771 (1075)
..+.+.+.+......+...+......+...+..+ ...+.+++++||+........ .-.+.|.+...+..
T Consensus 256 ~~~~~~f~~~~~~~~~~~~k~~~~~~~~~~~~~~-----~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~ 330 (1466)
T PTZ00265 256 KTILKKFNLSEKLYSKYILKANFMESLHIGMING-----FILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLG 330 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHH
Confidence 8877766544444333332222111111111111 112334455555543221100 00011222211111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCCc--
Q 001446 772 LASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQ-- 849 (1075)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~-- 849 (1075)
....+..++.+...+..+.....+++|++++++.+++.++. .. +...+. .+.|+|+||+|+||+.
T Consensus 331 ----~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~~~~~~~---~~---~~~~~~---~~~I~~~nVsf~Y~~~~~ 397 (1466)
T PTZ00265 331 ----VLISMFMLTIILPNITEYMKSLEATNSLYEIINRKPLVENN---DD---GKKLKD---IKKIQFKNVRFHYDTRKD 397 (1466)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC---CC---CccCCC---CCcEEEEEEEEEcCCCCC
Confidence 11112233445555666777888999999998654332210 00 011221 2479999999999864
Q ss_pred cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEec-CCCCCccc--cCCcCcEEEEcCCCCCCCcchh
Q 001446 850 KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTK-PSQHIDEE--AGSGCGIFYVPQRPYTCLGTLR 926 (1075)
Q Consensus 850 ~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~i-dg~di~~~--~~~r~~i~~VpQdP~Lf~gTir 926 (1075)
.++|+|+||+|+|||++|||||||||||||+++|.|+|+|++|+|.+ ||+|++++ ..+|++|++|||+|+||++||+
T Consensus 398 ~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~ 477 (1466)
T PTZ00265 398 VEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIK 477 (1466)
T ss_pred CceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHH
Confidence 47999999999999999999999999999999999999999999999 67999876 3568889999999999999999
Q ss_pred hhhcCCCCh-H----------------HHH---HHHhhh------------cCCCccc---ccccccchHHHHHHHHhCC
Q 001446 927 DQIIYPLSR-E----------------EAE---LRALKL------------HGKGEKL---VDTTNILDSYLKTILEGVR 971 (1075)
Q Consensus 927 ~NL~~p~~~-~----------------~~~---~~a~~~------------~~~~~~~---~~~~~~~d~~i~~~l~~~~ 971 (1075)
+||.|+... . ++. ....+. ....+.+ .......|++++++++.++
T Consensus 478 eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~ 557 (1466)
T PTZ00265 478 NNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVL 557 (1466)
T ss_pred HHHHhcCCCccccchhccccccccccccccccccccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhC
Confidence 999985310 0 000 000000 0000000 0012356788999999999
Q ss_pred chhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEec
Q 001446 972 LSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSS 1046 (1075)
Q Consensus 972 L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~Ia 1046 (1075)
+++++.++|+||||.+ +.+.+|||||||||||||||+++|+|||||||||+||.+++..+++.+++ .|+|+|+||
T Consensus 558 l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIs 637 (1466)
T PTZ00265 558 IHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIA 637 (1466)
T ss_pred cHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 9999999999999986 46789999999999999999999999999999999999999999887754 389999999
Q ss_pred CCCCchhhccceEEEEcCC
Q 001446 1047 QRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1047 HRls~i~~~~~~l~l~~g~ 1065 (1075)
||++++++.|++++|.+|.
T Consensus 638 Hrls~i~~aD~Iivl~~g~ 656 (1466)
T PTZ00265 638 HRLSTIRYANTIFVLSNRE 656 (1466)
T ss_pred CCHHHHHhCCEEEEEeCCc
Confidence 9999999999999998874
No 69
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2e-52 Score=501.34 Aligned_cols=369 Identities=22% Similarity=0.297 Sum_probs=294.4
Q ss_pred cCcchhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 5 FSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGA 84 (1075)
Q Consensus 5 ~~~~~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (1075)
+.|.+.+.+.++.+..++--..+.+...++|+||..+.|.....+|++.|.+..+...+..+.....+....++.....
T Consensus 313 ~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~- 391 (709)
T COG2274 313 FQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQLSS- 391 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH-
Confidence 5688888888888888888888999999999999999999999999999988766544333333333333333322111
Q ss_pred HHHHHHHHhhhhcccccc-CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 001446 85 TVAVILIIEPFFAGNLKP-DTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIE 163 (1075)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~ 163 (1075)
+...|+|..++. +..++|...++..+ ...+.+.+..++..+.++.+++.+.+|+.++++.++|.+.+
T Consensus 392 ------v~iL~~G~~lVl~~~lTlG~LiAf~~l------~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~ 459 (709)
T COG2274 392 ------VLILWFGAILVLEGELTLGQLVAFNML------AGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGD 459 (709)
T ss_pred ------HHHHHHHHHHHhcCCcchHHHHHHHHH------HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence 111255555443 34466654444322 22233445667777889999999999999998877664332
Q ss_pred CCCCCCCCCCCCCCCCccEEEEeEEEEcCCC-CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeC
Q 001446 164 DKSPQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKP 242 (1075)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~ 242 (1075)
... ...+...+.++++||+|+|+.+ .++|+|+||+|++||+++|+|+||||||||+|+|+|+++|++|+|.+|
T Consensus 460 ~~~------~~~~~~~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~d 533 (709)
T COG2274 460 KTL------IHLPKLQGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLD 533 (709)
T ss_pred ccc------ccccccCceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEC
Confidence 110 0112235789999999999755 469999999999999999999999999999999999999999999999
Q ss_pred CcC------ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCC
Q 001446 243 GVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWG 313 (1075)
Q Consensus 243 ~~~------~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g 313 (1075)
|.+ ..+|++|+||+|++.+|++|++|||.++.+ ..+++++.++++..+.++++.++|.+.++ +.|
T Consensus 534 g~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p------~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G 607 (709)
T COG2274 534 GVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNP------EATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGG 607 (709)
T ss_pred CEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCC------CCCHHHHHHHHHHhCcHHHHHhcccccccccccCC
Confidence 986 457899999999999999999999999864 34578899999999999999999998765 678
Q ss_pred CCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CCeEEEEecChhhHhhCCeEEEEcCCCcEE
Q 001446 314 DELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVAFHDVVLSLDGEGEWR 391 (1075)
Q Consensus 314 ~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~vtH~~~~~~~~d~i~~l~~~g~~~ 391 (1075)
.+||||||||++|||||+++|+||||||||||||+++++.+++.+.+. |+|+|+||||++.++.||+|++|++ |..
T Consensus 608 ~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~--Gki 685 (709)
T COG2274 608 ANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQ--GKI 685 (709)
T ss_pred CCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccC--Cce
Confidence 999999999999999999999999999999999999999999999874 6999999999999999999999986 446
Q ss_pred EecCCCCcc
Q 001446 392 VHDKRDGSS 400 (1075)
Q Consensus 392 ~~~~~~~~~ 400 (1075)
++.+.+++.
T Consensus 686 v~~gs~~el 694 (709)
T COG2274 686 VEQGSHEEL 694 (709)
T ss_pred eccCCHHHH
Confidence 666555544
No 70
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=6.3e-50 Score=483.41 Aligned_cols=246 Identities=17% Similarity=0.168 Sum_probs=196.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCCccccccccce
Q 001446 779 SFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQLTF 858 (1075)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~~~vL~~vs~ 858 (1075)
...++..+......+.....+.+|+.++.+.+++.+. . ...+ -+ ..+.|+|+||+|+||+.+++|+|+||
T Consensus 275 ~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~----~-~~~~--~~---~~~~i~~~~v~f~y~~~~~~l~~i~~ 344 (547)
T PRK10522 275 LRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEF----P-RPQA--FP---DWQTLELRNVTFAYQDNGFSVGPINL 344 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc----c-cccc--cC---cCceEEEEEEEEEeCCCCeEEecceE
Confidence 3457777888888888888999999998643211110 0 0000 01 13579999999999976789999999
Q ss_pred eecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcchhhhhcCCCChH
Q 001446 859 EIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSRE 936 (1075)
Q Consensus 859 ~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~ 936 (1075)
+|+|||++|||||||||||||+++|+|+|+|++|+|.+||+|+++. +.+|+++++|||||++|+||+++| . +. .+
T Consensus 345 ~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n-~-~~-~~ 421 (547)
T PRK10522 345 TIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE-G-KP-AN 421 (547)
T ss_pred EEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc-c-Cc-hH
Confidence 9999999999999999999999999999999999999999999876 356788999999999999999998 1 21 11
Q ss_pred HHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCChhHHHHHHHHHHhhcCCCEeEe
Q 001446 937 EAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGIL 1016 (1075)
Q Consensus 937 ~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiL 1016 (1075)
+++++++++.+++.+.+.. ++|. ..|.+||||||||+|||||++++|+||||
T Consensus 422 -----------------------~~~~~~~~~~~~l~~~~~~-~~~~----~~G~~LSgGq~qRl~lARal~~~~~ilil 473 (547)
T PRK10522 422 -----------------------PALVEKWLERLKMAHKLEL-EDGR----ISNLKLSKGQKKRLALLLALAEERDILLL 473 (547)
T ss_pred -----------------------HHHHHHHHHHcCCchhhhc-cccC----CCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 2334555666666544332 2221 12678999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHHHHHH----hcCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1017 DECTNATSVDVEEQLYRLAK----DMGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1017 DEATSalD~~~e~~i~~~~~----~~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
|||||+||.++++.+.+.+. ..++|+|+||||+++++..|+++++++|.
T Consensus 474 DE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~ 526 (547)
T PRK10522 474 DEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQ 526 (547)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCE
Confidence 99999999999998876653 24899999999999999999999998765
No 71
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.5e-51 Score=457.73 Aligned_cols=198 Identities=27% Similarity=0.372 Sum_probs=165.3
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-------ccccccE
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-------SDLNKEI 252 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-------~~~~~~i 252 (1075)
..++++|++++|+ +.++|+++||++.+||+++++|.||+|||||+|+|+|.++|++|+|.++|+. ......|
T Consensus 7 ~ll~~~~i~K~Fg-gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~GI 85 (500)
T COG1129 7 PLLELRGISKSFG-GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAGI 85 (500)
T ss_pred ceeeeecceEEcC-CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCCc
Confidence 4689999999996 5789999999999999999999999999999999999999999999999964 1234579
Q ss_pred EEEcCCCCCCc-CCHHHHhcCCCCCCcccC----cCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHH
Q 001446 253 FYVPQRPYTAV-GTLRDQLIYPLTSDQEVE----PLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 327 (1075)
Q Consensus 253 ~~v~Q~~~~~~-~tv~~ni~~~~~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lA 327 (1075)
+.|+|++.+++ .||.|||.++........ .....+..++|+.+++....+.. ..+||+||||.|+||
T Consensus 86 ~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~--------v~~LsiaqrQ~VeIA 157 (500)
T COG1129 86 ATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTL--------VGDLSIAQRQMVEIA 157 (500)
T ss_pred EEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhh--------hhhCCHHHHHHHHHH
Confidence 99999998754 699999988765432111 12234556778888875223332 268999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHH---HhcCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 328 RLFYHKPKFAILDECTSAVTTDMEERFCAKV---RAMGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 328 ral~~~p~illLDEpts~LD~~~~~~i~~~l---~~~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
||+..+++++|||||||+|+....+.+++.+ ++.|.++|+|||+++.+ +.||+|.+|.+
T Consensus 158 rAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRD 220 (500)
T COG1129 158 RALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRD 220 (500)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeC
Confidence 9999999999999999999999888887765 45799999999999887 57999999975
No 72
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=2e-49 Score=433.08 Aligned_cols=254 Identities=28% Similarity=0.384 Sum_probs=215.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCC-ccccccc
Q 001446 777 SQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQ 855 (1075)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~-~~~vL~~ 855 (1075)
.....++-..+..+.++..+..|..|+.++++..+...+. .|-+..+|.+..+++++.-|+ .+|+|+|
T Consensus 286 gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~~-----------m~LP~P~g~L~Ve~l~~~PPg~~~pil~~ 354 (580)
T COG4618 286 GRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAER-----------MPLPAPQGALSVERLTAAPPGQKKPILKG 354 (580)
T ss_pred hhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC-----------CCCCCCCceeeEeeeeecCCCCCCcceec
Confidence 4556688888889999999999999999988754332211 111223799999999997776 5699999
Q ss_pred cceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEEEEcCCCCCCCcchhhhhcC-C
Q 001446 856 LTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFYVPQRPYTCLGTLRDQIIY-P 932 (1075)
Q Consensus 856 vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~~VpQdP~Lf~gTir~NL~~-p 932 (1075)
+||+++|||-+||+||||||||||.++|.|.|+|.+|+|.+||-|++..+ .+-.+|+|.|||--||+|||+|||.- .
T Consensus 355 isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~ 434 (580)
T COG4618 355 ISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFG 434 (580)
T ss_pred ceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999884 46668999999999999999999973 2
Q ss_pred -CChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcC
Q 001446 933 -LSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHK 1010 (1075)
Q Consensus 933 -~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~ 1010 (1075)
+...+.+++|++.++. ++++-++|+||||.+ +.|..|||||||||++|||+..+
T Consensus 435 ~~~d~~kIieAA~lAgv------------------------HelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~ 490 (580)
T COG4618 435 EEADPEKVIEAARLAGV------------------------HELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGD 490 (580)
T ss_pred ccCCHHHHHHHHHHcCh------------------------HHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCC
Confidence 2233445677766554 345566789999986 67899999999999999999999
Q ss_pred CCEeEeeccCCCCCHHHHHHHHHHH---HhcCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1011 PKFGILDECTNATSVDVEEQLYRLA---KDMGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1011 p~ILiLDEATSalD~~~e~~i~~~~---~~~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
|++++||||-|+||.+-|.++.+.+ +.+|+|+|+||||.+.+...|+++.+.+|.
T Consensus 491 P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~ 548 (580)
T COG4618 491 PFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGR 548 (580)
T ss_pred CcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCCh
Confidence 9999999999999999999887665 447999999999999999999999998774
No 73
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=3.2e-49 Score=482.78 Aligned_cols=382 Identities=37% Similarity=0.697 Sum_probs=297.1
Q ss_pred ccccCcchhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 2 MRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKY 81 (1075)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (1075)
.+.++|++.++..++++.+++++..+.++++|+|+||+|++|+.|.+++.+.++++.+...+..+....+..+..++..+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 335 (659)
T TIGR00954 256 LTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAKY 335 (659)
T ss_pred HHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999888887777666666666655544
Q ss_pred HHHHHHHHHHHhhhhccc-cccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 001446 82 LGATVAVILIIEPFFAGN-LKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISREL 160 (1075)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~ 160 (1075)
....++++++..+++... ...+..+.|.. ++.+......+..++.++..+......+.+...+.+|+.++++..++.
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~--~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~ 413 (659)
T TIGR00954 336 TWSAVGLVAVSIPIFDKTHPAFLEMSEEEL--MQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDV 413 (659)
T ss_pred HHHHHHHHHHHHHHHhcccccccccCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333323333211 11122233422 221112223445566778888888899999999999999998765543
Q ss_pred cccC---CCCCC--CC------------CCCCCCCCccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHH
Q 001446 161 SIED---KSPQR--NG------------SRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSS 223 (1075)
Q Consensus 161 ~~~~---~~~~~--~~------------~~~~~~~~~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKST 223 (1075)
.... ..... .. ........+.++++||++.|++++++|+|+||++++||+++|+|||||||||
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~~~il~~isl~i~~Ge~~~IvG~nGsGKST 493 (659)
T TIGR00954 414 KSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNGDVLIESLSFEVPSGNHLLICGPNGCGKSS 493 (659)
T ss_pred hcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCCCeeeecceEEECCCCEEEEECCCCCCHHH
Confidence 2100 00000 00 0000112356999999999986678999999999999999999999999999
Q ss_pred HHHHHhCCCCCCccEEEeCCcCccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcc-cCcCCHHHHHHHHHHcCChhHHh
Q 001446 224 LFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEYLLD 302 (1075)
Q Consensus 224 Ll~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~ 302 (1075)
|+++|+|+++|++|+|.+++ +++++||||+|+++++|++||+.++...... .....++++.++++.++++++.+
T Consensus 494 Ll~lL~Gl~~~~~G~i~~~~-----~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~ 568 (659)
T TIGR00954 494 LFRILGELWPVYGGRLTKPA-----KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQLTHILE 568 (659)
T ss_pred HHHHHhCCCCCCCCeEeecC-----CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCCHHHHh
Confidence 99999999999999999875 4579999999999999999999987532211 11235667889999999999887
Q ss_pred cCCCC--cccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHhcCCeEEEEecChhhHhhCCe
Q 001446 303 RYPPE--KEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFHDV 380 (1075)
Q Consensus 303 ~~~~~--~~~~~g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~t~i~vtH~~~~~~~~d~ 380 (1075)
+ |.+ +..+|+.+||||||||++||||++++|+++|||||||+||+++++.+.+.+++.|+|+|+||||++.++.||+
T Consensus 569 ~-~~g~~~~~~~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~~~~tvI~isH~~~~~~~~d~ 647 (659)
T TIGR00954 569 R-EGGWSAVQDWMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCREFGITLFSVSHRKSLWKYHEY 647 (659)
T ss_pred h-cCCcccccccccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHcCCEEEEEeCchHHHHhCCE
Confidence 7 443 3335778999999999999999999999999999999999999999999998889999999999999999999
Q ss_pred EEEEcCCCcEE
Q 001446 381 VLSLDGEGEWR 391 (1075)
Q Consensus 381 i~~l~~~g~~~ 391 (1075)
+++++++|+|.
T Consensus 648 il~l~~~g~~~ 658 (659)
T TIGR00954 648 LLYMDGRGGYQ 658 (659)
T ss_pred EEEEeCCCCcc
Confidence 99999888774
No 74
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.5e-49 Score=486.17 Aligned_cols=372 Identities=17% Similarity=0.236 Sum_probs=269.3
Q ss_pred cchhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 7 PAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATV 86 (1075)
Q Consensus 7 ~~~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (1075)
+...+...+.++..+++...+....++.++||.|++|+.+.+++.+..++..+...+..+.......+..++.. +..+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~- 262 (588)
T PRK11174 185 MGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLSSAVLEFFAS-ISIA- 262 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-
Confidence 33444444555666777777888888999999999999999888777766655543333322222222111111 1110
Q ss_pred HHHHHHhhhhccccccCcc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccC
Q 001446 87 AVILIIEPFFAGNLKPDTS--TLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIED 164 (1075)
Q Consensus 87 ~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~ 164 (1075)
..+++.+.++.+.+..+.. .++....+ ........++..+..+......+.+...+++|+.++++.+++... .
T Consensus 263 ~~~~~~~~~~~g~~t~G~l~~~~~~~~~~----~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~-~ 337 (588)
T PRK11174 263 LVAVYFGFSYLGELNFGHYGTGVTLFAGF----FVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFLETPLAHPQ-Q 337 (588)
T ss_pred HHHHHHHHHHhcccccccccccchHHHHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccC-C
Confidence 1111111122233332221 11111111 111222344556667777778889999999999998765432110 0
Q ss_pred CCCCCCCCCCCCCCCccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCc
Q 001446 165 KSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGV 244 (1075)
Q Consensus 165 ~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~ 244 (1075)
.. ........+.++++||+|.|++++++|+|+||+|++|++++|+||||||||||+++|+|++ |++|+|.++|.
T Consensus 338 ~~-----~~~~~~~~~~i~~~~vsf~~~~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~I~i~g~ 411 (588)
T PRK11174 338 GE-----KELASNDPVTIEAEDLEILSPDGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQGSLKINGI 411 (588)
T ss_pred Cc-----cccCCCCCceEEEEeeEEeccCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcEEEECCE
Confidence 00 0000011235999999987766678999999999999999999999999999999999999 89999999997
Q ss_pred C------ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCC
Q 001446 245 G------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDE 315 (1075)
Q Consensus 245 ~------~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~ 315 (1075)
+ ..++++|+||||+|++|++||+|||.++.+ ..+++++.++++.++++++++++|.+.++ +.|.+
T Consensus 412 ~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~------~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~ 485 (588)
T PRK11174 412 ELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNP------DASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAAG 485 (588)
T ss_pred ecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCC------CCCHHHHHHHHHHhCHHHHHHhcccccccccccCCCC
Confidence 5 346789999999999999999999999742 35678999999999999999999987655 56889
Q ss_pred CChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcCCCcEEEe
Q 001446 316 LSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGEGEWRVH 393 (1075)
Q Consensus 316 LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~~~~ 393 (1075)
||||||||++|||||+++|+|+|||||||+||+++++.+.+.+++ .++|+|+|||+++.++.+|+|++++++ ..++
T Consensus 486 LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G--~i~e 563 (588)
T PRK11174 486 LSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDG--QIVQ 563 (588)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCC--eEee
Confidence 999999999999999999999999999999999999999998876 489999999999999999999999863 3445
Q ss_pred cCCCCc
Q 001446 394 DKRDGS 399 (1075)
Q Consensus 394 ~~~~~~ 399 (1075)
.+.+++
T Consensus 564 ~G~~~e 569 (588)
T PRK11174 564 QGDYAE 569 (588)
T ss_pred cCCHHH
Confidence 444433
No 75
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2.8e-49 Score=491.03 Aligned_cols=364 Identities=21% Similarity=0.229 Sum_probs=278.8
Q ss_pred cCcchhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 5 FSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGA 84 (1075)
Q Consensus 5 ~~~~~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (1075)
+.+.+.+...+..+.++++...+....+++++||.++.|+.+.+++.+.+++..+...+..+...+...+..++.. +
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~-- 371 (686)
T TIGR03797 295 LGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLPV-L-- 371 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H--
Confidence 3445566666777777888888899999999999999999999988888887766555444333333332222211 1
Q ss_pred HHHHHHHHhhhhccccc-cCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 001446 85 TVAVILIIEPFFAGNLK-PDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIE 163 (1075)
Q Consensus 85 ~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~ 163 (1075)
....+++ +++.+. .+..+.|...++. ..+..++..+..+.....++.....+.+|+.++++.+++....
T Consensus 372 ~~~~il~----~g~~lv~~g~ltiG~lva~~------~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~ 441 (686)
T TIGR03797 372 TSAALFA----AAISLLGGAGLSLGSFLAFN------TAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEA 441 (686)
T ss_pred HHHHHHH----HHHHHHHcCCCCHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Confidence 1111111 222211 1223455432222 2233444556677778888999999999999887654432110
Q ss_pred CCCCCCCCCCCCCCCCccEEEEeEEEEcCC-CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeC
Q 001446 164 DKSPQRNGSRNYFSEANYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKP 242 (1075)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~-~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~ 242 (1075)
. .......+.++++||+|.|++ ++++|+|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.+|
T Consensus 442 ~--------~~~~~~~~~I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~id 513 (686)
T TIGR03797 442 K--------TDPGKLSGAIEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYD 513 (686)
T ss_pred c--------CCCCCCCceEEEEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEEC
Confidence 0 000111346999999999964 5689999999999999999999999999999999999999999999999
Q ss_pred CcC------ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCC
Q 001446 243 GVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWG 313 (1075)
Q Consensus 243 ~~~------~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g 313 (1075)
|.+ ..+|++|+||||+|++|++|++|||.++.+ .+++++.++++.++++++++++|.+.++ +.|
T Consensus 514 g~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-------~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G 586 (686)
T TIGR03797 514 GQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAP-------LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGG 586 (686)
T ss_pred CEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCC-------CCHHHHHHHHHHcCcHHHHHhccccccccccCCC
Confidence 975 356789999999999999999999998743 3577899999999999999999987654 568
Q ss_pred CCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHhcCCeEEEEecChhhHhhCCeEEEEcCCCcEEEe
Q 001446 314 DELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGEWRVH 393 (1075)
Q Consensus 314 ~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~~~~ 393 (1075)
.+||||||||++|||||+++|+++|||||||+||+++++++++.+++.++|+|+|||+++.++.+|+|++|+++ ..++
T Consensus 587 ~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~~~T~IiItHr~~~i~~~D~Iivl~~G--~iv~ 664 (686)
T TIGR03797 587 GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERLKVTRIVIAHRLSTIRNADRIYVLDAG--RVVQ 664 (686)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHhCCeEEEEecChHHHHcCCEEEEEECC--EEEE
Confidence 89999999999999999999999999999999999999999999988889999999999999999999999863 3444
Q ss_pred cCCCC
Q 001446 394 DKRDG 398 (1075)
Q Consensus 394 ~~~~~ 398 (1075)
.+.++
T Consensus 665 ~G~~~ 669 (686)
T TIGR03797 665 QGTYD 669 (686)
T ss_pred ECCHH
Confidence 44443
No 76
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.1e-49 Score=491.12 Aligned_cols=368 Identities=21% Similarity=0.295 Sum_probs=275.5
Q ss_pred ccCcchhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 4 NFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLG 83 (1075)
Q Consensus 4 ~~~~~~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (1075)
.+.+...++..+.++.++++...+....+++++|+.|++|+.+.+++.+..++..+..++..............+.. +.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 398 (711)
T TIGR00958 320 VFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSVLGM-LI 398 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 34455666677777888888888999999999999999999999988888777665544333222222222211111 11
Q ss_pred HHHHHHHHHhhhhccccc-cCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 001446 84 ATVAVILIIEPFFAGNLK-PDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSI 162 (1075)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~ 162 (1075)
.+ .++. +++.+. .+..+.|....+ ......+...+..+......+.+...+.+|+.++++.+++...
T Consensus 399 ~~--~il~----~g~~lv~~g~it~G~lva~------~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~ 466 (711)
T TIGR00958 399 QV--LVLY----YGGQLVLTGKVSSGNLVSF------LLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPL 466 (711)
T ss_pred HH--HHHH----HHHHHHHcCCCCHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 11 1111 111111 122244433221 1223344556667777788899999999999998865443211
Q ss_pred cCCCCCCCCCCCCCCCCccEEEEeEEEEcCC--CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEE
Q 001446 163 EDKSPQRNGSRNYFSEANYIEFSGVKVVTPT--GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIA 240 (1075)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~--~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~ 240 (1075)
.. .....+..+.|+++||+|.||+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.
T Consensus 467 ~~-------~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~ 539 (711)
T TIGR00958 467 TG-------TLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVL 539 (711)
T ss_pred CC-------CCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEE
Confidence 10 0001112346999999999985 35899999999999999999999999999999999999999999999
Q ss_pred eCCcC------ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---C
Q 001446 241 KPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---N 311 (1075)
Q Consensus 241 ~~~~~------~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~ 311 (1075)
+||.+ ..++++|+||||+|++|++|++|||.++.+ ..+++++.++++.++++++++++|.+.++ +
T Consensus 540 idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~------~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige 613 (711)
T TIGR00958 540 LDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLT------DTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGE 613 (711)
T ss_pred ECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCC------CCCHHHHHHHHHHcCCHHHHHhCCCccCCcccC
Confidence 99975 346789999999999999999999999853 23567899999999999999999976554 5
Q ss_pred CCCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHhcCCeEEEEecChhhHhhCCeEEEEcCCCcEE
Q 001446 312 WGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGEWR 391 (1075)
Q Consensus 312 ~g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~~ 391 (1075)
+|.+||||||||++||||++++|+|+|||||||+||+++++.+.+.....++|+|+|||+++.+..+|+|++|++ |..
T Consensus 614 ~G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~~~~~~~~TvIiItHrl~~i~~aD~IivL~~--G~i 691 (711)
T TIGR00958 614 KGSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQESRSRASRTVLLIAHRLSTVERADQILVLKK--GSV 691 (711)
T ss_pred CCCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHHhhccCCCeEEEEeccHHHHHhCCEEEEEEC--CEE
Confidence 678999999999999999999999999999999999999999998444468999999999999999999999986 335
Q ss_pred EecCCCCc
Q 001446 392 VHDKRDGS 399 (1075)
Q Consensus 392 ~~~~~~~~ 399 (1075)
++.+++++
T Consensus 692 ve~Gt~~e 699 (711)
T TIGR00958 692 VEMGTHKQ 699 (711)
T ss_pred EEeeCHHH
Confidence 55554443
No 77
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.4e-49 Score=493.98 Aligned_cols=373 Identities=23% Similarity=0.294 Sum_probs=279.0
Q ss_pred cCcchhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 5 FSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGA 84 (1075)
Q Consensus 5 ~~~~~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (1075)
+.+...+...+.++.++++...+.....++++||.+++|+.+.+++.+.+.+..+...+..+...+...+..++.... .
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~ 391 (710)
T TIGR03796 313 VSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILGVLPTLLTSLN-S 391 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 344555666667777788888888888999999999999999999988887766655444333333333222222111 1
Q ss_pred HHHHHHHHhhhhccccc-cCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 001446 85 TVAVILIIEPFFAGNLK-PDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIE 163 (1075)
Q Consensus 85 ~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~ 163 (1075)
+ .++ ++++.+. .+..+.|...++ ...+..++..+..+.....++.....+.+|+.++++.+++....
T Consensus 392 ~--~il----~~g~~~v~~g~lt~G~lva~------~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~ 459 (710)
T TIGR03796 392 A--LIL----VVGGLRVMEGQLTIGMLVAF------QSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLE 459 (710)
T ss_pred H--HHH----HHHHHHHHcCCCCHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccc
Confidence 1 111 1222111 122345533222 12233444566677777888999999999999988654432111
Q ss_pred CCCCCCCCCCCCCCCCccEEEEeEEEEcCC-CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeC
Q 001446 164 DKSPQRNGSRNYFSEANYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKP 242 (1075)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~-~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~ 242 (1075)
................+.|+++||+|.|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+|
T Consensus 460 ~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~id 539 (710)
T TIGR03796 460 EEEAPAAGSEPSPRLSGYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFD 539 (710)
T ss_pred cccccccccccCCCCCCeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEC
Confidence 000000000000112356999999999985 4689999999999999999999999999999999999999999999999
Q ss_pred CcC------ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCC
Q 001446 243 GVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWG 313 (1075)
Q Consensus 243 ~~~------~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g 313 (1075)
|.+ .+++++|+||||+|++|++|++|||.++.+ ..+++++.++++.++++++++++|.+.++ +.|
T Consensus 540 g~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~------~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G 613 (710)
T TIGR03796 540 GIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDP------TIPDADLVRACKDAAIHDVITSRPGGYDAELAEGG 613 (710)
T ss_pred CEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCC------CCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCC
Confidence 975 346889999999999999999999998632 24678899999999999999999987554 578
Q ss_pred CCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHhcCCeEEEEecChhhHhhCCeEEEEcCCCcEEEe
Q 001446 314 DELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGEWRVH 393 (1075)
Q Consensus 314 ~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~~~~ 393 (1075)
.+|||||||||+|||||+++|+++|||||||+||+++++.+++.+++.++|+|+|||+++.+..+|+|++|+++ ..++
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~~~~T~IiitHrl~~i~~~D~Iivl~~G--~i~~ 691 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRRRGCTCIIVAHRLSTIRDCDEIIVLERG--KVVQ 691 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEeCC--EEEE
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999863 3444
Q ss_pred cCCCC
Q 001446 394 DKRDG 398 (1075)
Q Consensus 394 ~~~~~ 398 (1075)
.+.++
T Consensus 692 ~G~~~ 696 (710)
T TIGR03796 692 RGTHE 696 (710)
T ss_pred ecCHH
Confidence 44443
No 78
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.2e-49 Score=433.49 Aligned_cols=356 Identities=22% Similarity=0.260 Sum_probs=249.6
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 001446 16 EQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPF 95 (1075)
Q Consensus 16 ~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (1075)
..+.+.+....+-....|=|.||.||-|+.|.++......+..+.-.+........++.|..++...-..+.++.... .
T Consensus 206 ~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~g-i 284 (591)
T KOG0057|consen 206 MNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGSNG-I 284 (591)
T ss_pred HHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhhh-h
Confidence 333444443344445568999999999999998766665555444333333333334444433321111111111111 1
Q ss_pred hccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCC
Q 001446 96 FAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNY 175 (1075)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (1075)
+++.+ +.|...++..+.. .+-..+..+...+..+.+...-...+.... +.+.+..+. ....
T Consensus 285 ~~~~m-----tvgdlv~~n~l~~------qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~--~~~~~i~~~------~~~i 345 (591)
T KOG0057|consen 285 AAGKM-----TVGDLVMVNSLLF------QLSLPLNFLGSVYRELRQALTDMRTLFILL--EVDEDIQEA------ALPI 345 (591)
T ss_pred hhccc-----cccchhhHHHHHH------HHHhHHHHHHHHHHHHHHHHHhHHHHHhhh--hhhhhhhhc------cCCc
Confidence 22333 4443332222111 111223333334444433322222221111 111111110 0011
Q ss_pred CCCCccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------cccc
Q 001446 176 FSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLN 249 (1075)
Q Consensus 176 ~~~~~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~ 249 (1075)
....+.|+|+||+|+|++++++|+++||+|++||.+||+|+|||||||++|+|.++++ ++|+|++||++ ..+|
T Consensus 346 ~~~~~~I~F~dV~f~y~~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR 424 (591)
T KOG0057|consen 346 ELFGGSIEFDDVHFSYGPKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLR 424 (591)
T ss_pred ccCCCcEEEEeeEEEeCCCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhh
Confidence 1234569999999999888889999999999999999999999999999999999999 99999999986 3578
Q ss_pred ccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCChhHHHHHHH
Q 001446 250 KEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGM 326 (1075)
Q Consensus 250 ~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkqRl~l 326 (1075)
+.||||||+..+|++||.+||.||.. ..+++++.++++.+++++.+.++|.+..+ ++|..|||||||||+|
T Consensus 425 ~~Ig~VPQd~~LFndTIl~NI~YGn~------sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvsl 498 (591)
T KOG0057|consen 425 QSIGVVPQDSVLFNDTILYNIKYGNP------SASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSL 498 (591)
T ss_pred hheeEeCCcccccchhHHHHhhcCCC------CcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHH
Confidence 89999999999999999999999965 35678899999999999999999988655 6788999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcCCCcEEEecCCCCcc
Q 001446 327 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGEGEWRVHDKRDGSS 400 (1075)
Q Consensus 327 Aral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~~~~~~~~~~~ 400 (1075)
|||++++|+|+++|||||+||.++|+++++.+.+ .++|+|+|.||+++++.+|+|+++++++ ..+.+.+.++
T Consensus 499 aRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~--v~e~gth~el 572 (591)
T KOG0057|consen 499 ARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGT--VKEYGTHSEL 572 (591)
T ss_pred HHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCe--eEEeccHHHH
Confidence 9999999999999999999999999999999876 4999999999999999999999999743 4444455444
No 79
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2e-48 Score=438.49 Aligned_cols=346 Identities=22% Similarity=0.329 Sum_probs=268.9
Q ss_pred HHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-cccccCc
Q 001446 26 LHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFA-GNLKPDT 104 (1075)
Q Consensus 26 ~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~ 104 (1075)
-++++| ..+++++|+..+...+++.+.-++..+...++.+..+..+.+..++. +++..+..+.+...+.+ |.+
T Consensus 182 FLD~Lr-GL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa-~lsiAlvAv~~g~~ll~~G~l---- 255 (559)
T COG4988 182 FLDRLR-GLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFA-YLSIALVAVYIGFRLLGEGDL---- 255 (559)
T ss_pred HHHHhc-ChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHccCCc----
Confidence 466666 68999999999999999988888888887777777666665555543 33333322222222233 222
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCCCCCccEEE
Q 001446 105 STLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEF 184 (1075)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 184 (1075)
++..+ + .++-..+-+|..+-.+...+|.-....++++.+..+.+.+.+....... . .....+...++.
T Consensus 256 -tl~~~--l----~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~-~----~~~~~~~~ei~~ 323 (559)
T COG4988 256 -TLFAG--L----FVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEK-A----EVANEPPIEISL 323 (559)
T ss_pred -cHHHH--H----HHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccc-c----ccccCCCceeee
Confidence 32211 1 2223445677888888888888888888889988887654432111100 0 001111234556
Q ss_pred EeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEEEcCC
Q 001446 185 SGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQR 258 (1075)
Q Consensus 185 ~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~ 258 (1075)
+|+++.||+++++++|+||++++|++++|+|+||||||||+++|+|+.+|++|+|.+||.+ ..++++++||+|+
T Consensus 324 ~~l~~~y~~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~ 403 (559)
T COG4988 324 ENLSFRYPDGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQN 403 (559)
T ss_pred cceEEecCCCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCC
Confidence 6999999988899999999999999999999999999999999999999999999999975 3578999999999
Q ss_pred CCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCChhHHHHHHHHHHHcCCCC
Q 001446 259 PYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPK 335 (1075)
Q Consensus 259 ~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkqRl~lAral~~~p~ 335 (1075)
|++|.+|+||||.++.. ..+++++.++++..++.++.+. |.+.++ +.|..|||||+|||++||||+++++
T Consensus 404 p~lf~gTireNi~l~~~------~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~ 476 (559)
T COG4988 404 PYLFAGTIRENILLARP------DASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPAS 476 (559)
T ss_pred CccccccHHHHhhccCC------cCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCC
Confidence 99999999999999854 3567889999999999999998 776543 6788999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcCCCcEEEecCCCC
Q 001446 336 FAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGEGEWRVHDKRDG 398 (1075)
Q Consensus 336 illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~~~~~~~~~ 398 (1075)
++|+||||++||.++++.+.+.+.+ +++|+|+||||++.+..+|+|++|+++ ..++.+.+.
T Consensus 477 l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G--~l~~~g~~~ 539 (559)
T COG4988 477 LLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNG--RLVEQGTHE 539 (559)
T ss_pred EEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCC--ceeccCCHH
Confidence 9999999999999999999998865 489999999999999999999999974 244444443
No 80
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=8.8e-48 Score=506.65 Aligned_cols=441 Identities=18% Similarity=0.158 Sum_probs=276.2
Q ss_pred HHHHhHHHHHHHHHHHHHhccCC-ceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHHHHHHHHHHHHHhhc
Q 001446 560 ARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDILWFTWRMKALTG 638 (1075)
Q Consensus 560 ~~~~~~~r~~l~~~ll~~~l~~~-~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~~~~~~~~~l~~~~~ 638 (1075)
.+...+.|..+...+++..++-. .+++ ....+++.++++.|++.+.... ..+..++..++.++...+.++...+
T Consensus 366 ~~~~~~ir~~l~~~i~~k~l~l~~~~~~----~~~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l~~~lg 440 (1495)
T PLN03232 366 GRVGFRLRSTLVAAIFHKSLRLTHEARK----NFASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLLYQQLG 440 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcC----CCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45566666666666665554422 2221 2235678899999999988765 3333333333332222222221111
Q ss_pred hh---hHHHHHHHHHHHHHHHHHhccccccccHHHHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHHHHHHHHHHHHH
Q 001446 639 QR---GVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELLEHS 715 (1075)
Q Consensus 639 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~~~~~~~~~~~~ 715 (1075)
.. +++++++++++...+.+ .......+..+..........+..++.++|+.|++|+...+.+.+...+..+..
T Consensus 441 ~~~l~~~~v~~l~~pl~~~~~~----~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~ 516 (1495)
T PLN03232 441 VASLFGSLILFLLIPLQTLIVR----KMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWF 516 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 11 11111111111111111 112222222222222223334555678899999987766554443322222222
Q ss_pred HHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 716 LLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDILELHRKFVE 795 (1075)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (1075)
.+. .++.. +..++....+..+ ..+.++....... ..+.+.+..++ ..+..+..++..+......+.+
T Consensus 517 ~~~---~~~~~-~~~~~~~~~~~~~---~~~~fg~~~v~~~--~lt~g~vf~~l----~l~~~l~~pl~~l~~~~~~~~~ 583 (1495)
T PLN03232 517 RKA---QLLSA-FNSFILNSIPVVV---TLVSFGVFVLLGG--DLTPARAFTSL----SLFAVLRSPLNMLPNLLSQVVN 583 (1495)
T ss_pred HHH---HHHHH-HHHHHHHHHHHHH---HHHHHHHHHHhCC--CCCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 211 11111 1111111111110 0111111110000 01122222222 2333445567777777788889
Q ss_pred HhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCC--ccccccccceeecCCCeEEEEcCCC
Q 001446 796 LSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS--QKLLARQLTFEIVPGKSLLVTGPNG 873 (1075)
Q Consensus 796 ~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~--~~~vL~~vs~~I~~Ge~vaIvG~SG 873 (1075)
+..+.+|+.++++.+++.+.. .++ ..+ ..+.|+|+||+|+||+ ++++|+|+||+|++||+++||||||
T Consensus 584 a~~s~~Ri~~~L~~~~~~~~~------~~~-~~~---~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sG 653 (1495)
T PLN03232 584 ANVSLQRIEELLLSEERILAQ------NPP-LQP---GAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTG 653 (1495)
T ss_pred HHHHHHHHHHHHcCccccccc------cCC-cCC---CCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCC
Confidence 999999999998644321110 000 001 1357999999999985 4689999999999999999999999
Q ss_pred CcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccc
Q 001446 874 SGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLV 953 (1075)
Q Consensus 874 sGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~ 953 (1075)
||||||+++|+|+|+|.+|.+. .+|.+|+||||+|+||+|||||||.++...
T Consensus 654 SGKSTLl~lLlG~~~~~~G~i~----------~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~------------------ 705 (1495)
T PLN03232 654 EGKTSLISAMLGELSHAETSSV----------VIRGSVAYVPQVSWIFNATVRENILFGSDF------------------ 705 (1495)
T ss_pred CcHHHHHHHHhCCCcccCCCEE----------EecCcEEEEcCccccccccHHHHhhcCCcc------------------
Confidence 9999999999999999998763 245679999999999999999999986432
Q ss_pred cccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHH
Q 001446 954 DTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLY 1032 (1075)
Q Consensus 954 ~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~ 1032 (1075)
.+++++++++.++|.+.++.+|+|+||.+ +.|.+||||||||||||||++++|+|+||||||||||.++++.+.
T Consensus 706 -----~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~ 780 (1495)
T PLN03232 706 -----ESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVF 780 (1495)
T ss_pred -----CHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHH
Confidence 23445667777777777888899999986 678999999999999999999999999999999999999998775
Q ss_pred H-HHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1033 R-LAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1033 ~-~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
+ .+.. +++|+|+||||+++++..|++++|++|.
T Consensus 781 ~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~ 816 (1495)
T PLN03232 781 DSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGM 816 (1495)
T ss_pred HHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCE
Confidence 4 3433 5899999999999999999999998775
No 81
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.1e-48 Score=487.46 Aligned_cols=368 Identities=21% Similarity=0.270 Sum_probs=278.0
Q ss_pred ccCcchhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 4 NFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLG 83 (1075)
Q Consensus 4 ~~~~~~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (1075)
.+.+...+...+.++..+++...+....+++++||.+++|+.+.+++.+.+.+..+...+..+..........++.. +.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 392 (708)
T TIGR01193 314 LFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQAIKAVTKL-IL 392 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 34555667777777777888888888889999999999999999999888877666544333322222222222111 11
Q ss_pred HHHHHHHHHhhhhccccc-cCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 001446 84 ATVAVILIIEPFFAGNLK-PDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSI 162 (1075)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~ 162 (1075)
. ..++ ++++.+. .+..+.|...++. .....++..+..+.....++.....+.+|+.++++.+++...
T Consensus 393 ~--i~il----~~g~~lv~~g~ls~G~lva~~------~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~ 460 (708)
T TIGR01193 393 N--VVIL----WTGAYLVMRGKLTLGQLITFN------ALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFIN 460 (708)
T ss_pred H--HHHH----HHHHHHHHcCCCCHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccc
Confidence 1 1111 1222211 1223455432221 223334456667777788899999999999998765443221
Q ss_pred cCCCCCCCCCCCCCCCCccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeC
Q 001446 163 EDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKP 242 (1075)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~ 242 (1075)
... ........+.|+++||+|.|++++++|+|+||+|++||.++|+||||||||||+++|+|+++|++|+|.+|
T Consensus 461 ~~~------~~~~~~~~~~I~~~~vsf~y~~~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~id 534 (708)
T TIGR01193 461 KKK------RTELNNLNGDIVINDVSYSYGYGSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLN 534 (708)
T ss_pred ccc------ccCCCCCCCcEEEEEEEEEcCCCCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEC
Confidence 100 00011123569999999999866789999999999999999999999999999999999999999999999
Q ss_pred CcC------ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCC
Q 001446 243 GVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWG 313 (1075)
Q Consensus 243 ~~~------~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g 313 (1075)
|.+ ..+|++|+||||+|++|++||+|||.++.. ...+++++.++++.++++++++++|.+.++ ++|
T Consensus 535 g~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~-----~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G 609 (708)
T TIGR01193 535 GFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAK-----ENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEG 609 (708)
T ss_pred CEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCC-----CCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCC
Confidence 975 356789999999999999999999998732 124677899999999999999999987554 578
Q ss_pred CCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh-cCCeEEEEecChhhHhhCCeEEEEcCCCcEEE
Q 001446 314 DELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA-MGTSCITISHRPALVAFHDVVLSLDGEGEWRV 392 (1075)
Q Consensus 314 ~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~-~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~~~ 392 (1075)
.+||||||||++||||++++|+++|||||||+||+++++.+++.+++ .++|+|+||||++.+..+|+|++|+++ ..+
T Consensus 610 ~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~~~~T~IiitHr~~~~~~~D~i~~l~~G--~i~ 687 (708)
T TIGR01193 610 SSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNLQDKTIIFVAHRLSVAKQSDKIIVLDHG--KII 687 (708)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCEEEEEecchHHHHcCCEEEEEECC--EEE
Confidence 89999999999999999999999999999999999999999998876 479999999999999999999999863 344
Q ss_pred ecCCC
Q 001446 393 HDKRD 397 (1075)
Q Consensus 393 ~~~~~ 397 (1075)
+.+.+
T Consensus 688 ~~G~~ 692 (708)
T TIGR01193 688 EQGSH 692 (708)
T ss_pred EECCH
Confidence 44444
No 82
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.2e-47 Score=504.60 Aligned_cols=244 Identities=19% Similarity=0.187 Sum_probs=203.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCC--ccccccc
Q 001446 778 QSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS--QKLLARQ 855 (1075)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~--~~~vL~~ 855 (1075)
.+..++..+......+.++..+.+|+.++++.++..+.. .++ .-+ ..+.|+|+||+|+|++ ++++|+|
T Consensus 566 ~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~------~~~-~~~---~~~~I~~~nvsf~y~~~~~~~vL~~ 635 (1622)
T PLN03130 566 VLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLP------NPP-LEP---GLPAISIKNGYFSWDSKAERPTLSN 635 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccc------CCc-ccC---CCCceEEEeeEEEccCCCCCceeec
Confidence 345566677777788888999999999997543221100 000 001 1357999999999985 3689999
Q ss_pred cceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCC-CeEecCCCCCccccCCcCcEEEEcCCCCCCCcchhhhhcCCCC
Q 001446 856 LTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVS-GSLTKPSQHIDEEAGSGCGIFYVPQRPYTCLGTLRDQIIYPLS 934 (1075)
Q Consensus 856 vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~s-G~I~idg~di~~~~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~ 934 (1075)
+||+|++||+++||||||||||||+++|+|+++|.+ |+|.+ |.+|+||||+|++|+|||||||.++.+
T Consensus 636 inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l-----------~~~Iayv~Q~p~LfngTIreNI~fg~~ 704 (1622)
T PLN03130 636 INLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVI-----------RGTVAYVPQVSWIFNATVRDNILFGSP 704 (1622)
T ss_pred eeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEE-----------cCeEEEEcCccccCCCCHHHHHhCCCc
Confidence 999999999999999999999999999999999999 99974 456999999999999999999998643
Q ss_pred hHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCE
Q 001446 935 REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKF 1013 (1075)
Q Consensus 935 ~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~I 1013 (1075)
. .+++++++++.++|.+.++.+|+|++|.+ +.|.+||||||||||||||++++|+|
T Consensus 705 ~-----------------------d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~~~I 761 (1622)
T PLN03130 705 F-----------------------DPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDV 761 (1622)
T ss_pred c-----------------------cHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCCE
Confidence 2 23456677788888888889999999986 67899999999999999999999999
Q ss_pred eEeeccCCCCCHHHHHHHH-HHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1014 GILDECTNATSVDVEEQLY-RLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1014 LiLDEATSalD~~~e~~i~-~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
+||||||||||+++++.+. +.++. +++|+|+||||++.++..|++++|++|.
T Consensus 762 lLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~ 816 (1622)
T PLN03130 762 YIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGM 816 (1622)
T ss_pred EEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCE
Confidence 9999999999999998764 44433 5899999999999999999999998775
No 83
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=2.4e-48 Score=483.30 Aligned_cols=367 Identities=23% Similarity=0.313 Sum_probs=277.9
Q ss_pred ccCcchhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 4 NFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLG 83 (1075)
Q Consensus 4 ~~~~~~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (1075)
.+.+.+.+...+..+.++++...+.....++++||.++.|+.+.+++.+.+++..+...+..+.......+..++.. +.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 382 (694)
T TIGR03375 304 LLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLATNFAQFIQQ-LV 382 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 34556667777777788888888888899999999999999999999888877766544433322222222222111 11
Q ss_pred HHHHHHHHHhhhhccccc-cCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 001446 84 ATVAVILIIEPFFAGNLK-PDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSI 162 (1075)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~ 162 (1075)
.+ .++ ++++.+. .+..+.|...++ ...+..++..+..+......+.....+.+|+.++++.+++...
T Consensus 383 ~~--~il----~~g~~~v~~g~ls~G~l~a~------~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 450 (694)
T TIGR03375 383 SV--AIV----VVGVYLISDGELTMGGLIAC------VMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPE 450 (694)
T ss_pred HH--HHH----HHHHHHHHcCCCCHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 11 111 1222211 122345533222 2223344455666777778889999999999998865443211
Q ss_pred cCCCCCCCCCCCCCCCCccEEEEeEEEEcCC-CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEe
Q 001446 163 EDKSPQRNGSRNYFSEANYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAK 241 (1075)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~-~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~ 241 (1075)
... ........+.|+++||+|+|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+
T Consensus 451 ~~~------~~~~~~~~~~I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~i 524 (694)
T TIGR03375 451 GTR------FLHRPRLQGEIEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLL 524 (694)
T ss_pred CCC------CCCCCCccceEEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEE
Confidence 000 0001112346999999999975 457999999999999999999999999999999999999999999999
Q ss_pred CCcC------ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CC
Q 001446 242 PGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NW 312 (1075)
Q Consensus 242 ~~~~------~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~ 312 (1075)
||.+ ..++++|+||||+|++|++|++|||.++.+ ..+++++.++++.++++++++++|.+.++ ++
T Consensus 525 dg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~------~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~ 598 (694)
T TIGR03375 525 DGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAP------YADDEEILRAAELAGVTEFVRRHPDGLDMQIGER 598 (694)
T ss_pred CCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCC------CCCHHHHHHHHHHcChHHHHHhCcccccceecCC
Confidence 9975 356789999999999999999999998743 24678899999999999999999987554 57
Q ss_pred CCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcCCCcE
Q 001446 313 GDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGEGEW 390 (1075)
Q Consensus 313 g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~ 390 (1075)
|.+||||||||++||||++++|+++|||||||+||+++++.+.+.+++ .++|+|+||||++.++.||+|++|+++ .
T Consensus 599 G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G--~ 676 (694)
T TIGR03375 599 GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNG--R 676 (694)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCC--E
Confidence 889999999999999999999999999999999999999999999876 379999999999999999999999863 3
Q ss_pred EEecCCC
Q 001446 391 RVHDKRD 397 (1075)
Q Consensus 391 ~~~~~~~ 397 (1075)
.++.+.+
T Consensus 677 i~e~G~~ 683 (694)
T TIGR03375 677 IVADGPK 683 (694)
T ss_pred EEeeCCH
Confidence 4444444
No 84
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-48 Score=430.83 Aligned_cols=358 Identities=22% Similarity=0.310 Sum_probs=263.5
Q ss_pred HHHHHHHHHHHHH-HHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001446 15 KEQQLEGEYRQLH-SRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIE 93 (1075)
Q Consensus 15 ~~~~~e~~~r~~l-~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (1075)
...+..+.+|..+ +.+...+| ..+||.++..+..+.+.-+...+..++..+...+.+. +..++..+... ...
T Consensus 189 ~l~~~r~~lr~~~td~v~G~~E-L~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~~~~a----~~~l~~g~~v~--~~l 261 (573)
T COG4987 189 HLAQGRAALRSQFTDWVQGQAE-LLIFGAEDAYRTALEATEASWLKAQRKQARFTGLSDA----ILLLIAGLLVI--GLL 261 (573)
T ss_pred HHHHHHHHHHHHHHHHHhhHHH-HHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHH--HHH
Confidence 3444456666644 44555555 9999999999876666655555554444333333332 22222221111 122
Q ss_pred hhhccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCC
Q 001446 94 PFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLS-ISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGS 172 (1075)
Q Consensus 94 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 172 (1075)
.|+++....|..+...+ ++..+ ++...+.++..+. .+...+.+....+.|+.++.+.+++...++.+
T Consensus 262 ~w~a~~~~~G~~~~~~a-a~~ll-----~~f~~~eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e~~~~~~~------ 329 (573)
T COG4987 262 LWMAAQVGAGALAQPGA-ALALL-----VIFAALEAFEPLAPGAFQHLGQVIASARRLNDILDQKPEVTFPDEQ------ 329 (573)
T ss_pred HHHHhcCcCCCcchhHH-HHHHH-----HHHHHHHHHhhhcchhHHHhhHHHHHHHHHhhhccCCcccCCCccc------
Confidence 35665544443321111 11111 1123334444444 56677888888899998877665544322110
Q ss_pred CCCCCCCccEEEEeEEEEcCCCC-eeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------
Q 001446 173 RNYFSEANYIEFSGVKVVTPTGN-VLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------ 245 (1075)
Q Consensus 173 ~~~~~~~~~i~~~~v~~~~~~~~-~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------ 245 (1075)
.......++++||+|+||+.+ ++|+|+||++++||+++|+|+||||||||+++|.|.|+|++|+|..+|.+
T Consensus 330 --~~~~~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~~~~~l~~ 407 (573)
T COG4987 330 --TATTGQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGVEIASLDE 407 (573)
T ss_pred --cCCccceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeECCcChhhCCh
Confidence 111112699999999999765 79999999999999999999999999999999999999999999999965
Q ss_pred ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCChhHHH
Q 001446 246 SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQ 322 (1075)
Q Consensus 246 ~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkq 322 (1075)
+++++.|++++|++++|.+|+|+|+....+ ..++++++++++++||++++...|.+..+ +.|..|||||||
T Consensus 408 ~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~------~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE~r 481 (573)
T COG4987 408 QALRETISVLTQRVHLFSGTLRDNLRLANP------DASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGERR 481 (573)
T ss_pred hhHHHHHhhhccchHHHHHHHHHHHhhcCC------CCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCchHHH
Confidence 346778999999999999999999998754 36789999999999999999998876543 668999999999
Q ss_pred HHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcCCCcEEEecCCCCcc
Q 001446 323 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGEGEWRVHDKRDGSS 400 (1075)
Q Consensus 323 Rl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~~~~~~~~~~~ 400 (1075)
|++|||+|+++.+++||||||.|||+.+++++++.+.+ .|+|+|+|||++..++.+|+|++|++ |..+++++++++
T Consensus 482 RLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~drIivl~~--Gkiie~G~~~~L 559 (573)
T COG4987 482 RLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMDRIIVLDN--GKIIEEGTHAEL 559 (573)
T ss_pred HHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcCEEEEEEC--CeeeecCCHHhh
Confidence 99999999999999999999999999999999999876 49999999999999999999999997 346666666655
Q ss_pred c
Q 001446 401 V 401 (1075)
Q Consensus 401 ~ 401 (1075)
+
T Consensus 560 l 560 (573)
T COG4987 560 L 560 (573)
T ss_pred h
Confidence 4
No 85
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=2.7e-48 Score=474.92 Aligned_cols=366 Identities=20% Similarity=0.270 Sum_probs=274.6
Q ss_pred ccCcchhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 4 NFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLG 83 (1075)
Q Consensus 4 ~~~~~~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (1075)
.+.+.+.+...+.++..+++...+.....+.++||.|+.|+.+.+++.+..++..+...+..+..........++... .
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 262 (582)
T PRK11176 184 VVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQLIASL-A 262 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 344555666666677777787788888899999999999999999888888777666554443333333322222211 1
Q ss_pred HHHHHHHHHhhhhcccc-ccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 001446 84 ATVAVILIIEPFFAGNL-KPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSI 162 (1075)
Q Consensus 84 ~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~ 162 (1075)
.+ .++ ++++.. ..+..+.|...++ ...+..++..+..+......+.....+.+|+.++++.+++...
T Consensus 263 ~~--~i~----~~g~~~~~~g~is~g~~~~~------~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~ 330 (582)
T PRK11176 263 LA--FVL----YAASFPSVMDTLTAGTITVV------FSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDE 330 (582)
T ss_pred HH--HHH----HHHHHHHHcCCCCHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCC
Confidence 11 111 111111 1122244433221 1223334556667777788889999999999887654332111
Q ss_pred cCCCCCCCCCCCCCCCCccEEEEeEEEEcCCC-CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEe
Q 001446 163 EDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAK 241 (1075)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~ 241 (1075)
. . ....+..+.++++||+|.|+++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+
T Consensus 331 ~--~------~~~~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i 402 (582)
T PRK11176 331 G--K------RVIERAKGDIEFRNVTFTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILL 402 (582)
T ss_pred C--C------cCCCCCCCeEEEEEEEEecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEE
Confidence 0 0 0011123469999999999753 68999999999999999999999999999999999999999999999
Q ss_pred CCcC------ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CC
Q 001446 242 PGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NW 312 (1075)
Q Consensus 242 ~~~~------~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~ 312 (1075)
+|.+ ..+++.|+||||+|++|++|++|||.++.+ +..++++++++++.++++++++++|.+.++ ++
T Consensus 403 ~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~-----~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~ 477 (582)
T PRK11176 403 DGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYART-----EQYSREQIEEAARMAYAMDFINKMDNGLDTVIGEN 477 (582)
T ss_pred CCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCC-----CCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCC
Confidence 9975 245788999999999999999999998742 124678899999999999999999987654 56
Q ss_pred CCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcCCCcE
Q 001446 313 GDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGEGEW 390 (1075)
Q Consensus 313 g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~ 390 (1075)
|.+||||||||++|||||+++|+++|||||||+||++++..+++.+.+ .++|+|+||||++.++.||+|++++++ .
T Consensus 478 g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g--~ 555 (582)
T PRK11176 478 GVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDG--E 555 (582)
T ss_pred CCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECC--E
Confidence 889999999999999999999999999999999999999999998876 479999999999999999999999863 3
Q ss_pred EEecCCC
Q 001446 391 RVHDKRD 397 (1075)
Q Consensus 391 ~~~~~~~ 397 (1075)
..+.+.+
T Consensus 556 i~e~g~~ 562 (582)
T PRK11176 556 IVERGTH 562 (582)
T ss_pred EEEeCCH
Confidence 4444443
No 86
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1.9e-48 Score=427.53 Aligned_cols=197 Identities=28% Similarity=0.371 Sum_probs=169.9
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-------ccccccEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-------SDLNKEIF 253 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-------~~~~~~i~ 253 (1075)
.++++++++.|| +..++++|||+|++||+.+|+|+||+|||||+++|.|+++|++|+|.++|+. +..+..||
T Consensus 4 ~l~~~~itK~f~-~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~GIG 82 (501)
T COG3845 4 ALEMRGITKRFP-GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRLGIG 82 (501)
T ss_pred eEEEeccEEEcC-CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHcCCc
Confidence 589999999998 7889999999999999999999999999999999999999999999999974 23556799
Q ss_pred EEcCCCCCCc-CCHHHHhcCCCCCCcc---cCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHH
Q 001446 254 YVPQRPYTAV-GTLRDQLIYPLTSDQE---VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 329 (1075)
Q Consensus 254 ~v~Q~~~~~~-~tv~~ni~~~~~~~~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAra 329 (1075)
+|+|++.+++ .||.|||..+...... ......+++.++.+..|+.-..+... ..||-||||||.|-+|
T Consensus 83 MVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~~~V--------~dLsVG~qQRVEIlKa 154 (501)
T COG3845 83 MVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPDAKV--------ADLSVGEQQRVEILKA 154 (501)
T ss_pred EEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCcccee--------ecCCcchhHHHHHHHH
Confidence 9999998766 5999999998754311 11223456777888888876666554 6899999999999999
Q ss_pred HcCCCCEEEEeCCCCCCCHHHHHHHHHHHH---hcCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 330 FYHKPKFAILDECTSAVTTDMEERFCAKVR---AMGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 330 l~~~p~illLDEpts~LD~~~~~~i~~~l~---~~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
||++|++||||||||-|-|...+++++.++ +.|+|||+|||.++.+. .||++-+|..
T Consensus 155 Lyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~ 215 (501)
T COG3845 155 LYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRR 215 (501)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeC
Confidence 999999999999999999999998887665 56999999999998875 6999999975
No 87
>KOG0064 consensus Peroxisomal long-chain acyl-CoA transporter, ABC superfamily [Lipid transport and metabolism]
Probab=100.00 E-value=2.4e-49 Score=430.37 Aligned_cols=391 Identities=38% Similarity=0.720 Sum_probs=321.3
Q ss_pred CccccCcchhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 1 MMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLK 80 (1075)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (1075)
+||.++|+|+++.+++.++++.+|+.|+++.+|.|+||||+|.+.|.+++++.|+.++.....+++.+.|+.+...|+++
T Consensus 280 iLr~~sP~Fg~Lv~eeA~r~g~lr~~Hs~ii~NsEEIAfy~GhkvE~~ql~~sy~~L~~qm~li~k~r~~YiMleqF~mK 359 (728)
T KOG0064|consen 280 ILRAVSPKFGKLVAEEAARKGYLRYLHSNIITNSEEIAFYGGHKVELTQVDESYNRLVEQMNLIFKVRLWYIMLEQFVMK 359 (728)
T ss_pred HHHHhCCchhhHHHHHHhhccHHHHHHHHHhccHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhccccccCcc-h---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001446 81 YLGATVAVILIIEPFFAGNLKPDTS-T---LGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVI 156 (1075)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~ 156 (1075)
|.+...+++++..|.+.+....+.. . -+.. ....+...-..+.+...++..++.++..+.++.++..|+.++++.
T Consensus 360 YvWsg~GlvmvsiPI~~~t~~s~~~~~~~e~~~s-rt~~f~t~r~LL~saAdAieRlMssyKeItqLaGyt~Rv~~mf~v 438 (728)
T KOG0064|consen 360 YTWSGTGLVMVSIPILTSTLASEGTLQLSEEGNS-RTKEFITNRRLLLSAADAIERLMSSYKEITQLAGYTNRVFTMFSV 438 (728)
T ss_pred HhhccCceEEEEeeeeecccCCCCcccccccchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 9988877777766766555433211 0 1110 011111222456677788999999999999999999999876543
Q ss_pred hhhccccC--C-CCC-----------CCCC----CCCCCCCccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCc
Q 001446 157 SRELSIED--K-SPQ-----------RNGS----RNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNG 218 (1075)
Q Consensus 157 ~~~~~~~~--~-~~~-----------~~~~----~~~~~~~~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~G 218 (1075)
..+..... . ... .++. .........|.++|+.+..|.+..++..++|+|++|-.+.|+||||
T Consensus 439 ~~dv~~g~~~k~~v~e~~~~~~~~e~r~s~~l~~~~~i~~~~gI~lenIpvItP~~~vvv~~Ltf~i~~G~hLLItGPNG 518 (728)
T KOG0064|consen 439 LHDVHKGNYNKTAVPEILSSRTIDESRNSNPLPTTDAIRNFNGIILENIPVITPAGDVLVPKLTFQIEPGMHLLITGPNG 518 (728)
T ss_pred HHHHhcccccccccCchhhccCccccccCCcCCccchhhcccceEEecCceeccCcceeecceeEEecCCceEEEECCCC
Confidence 33221100 0 000 0000 0001123459999999999999999999999999999999999999
Q ss_pred chHHHHHHHHhCCCCCCccEEEeCCcCccccccEEEEcCCCCCCcCCHHHHhcCCCCCCccc-CcCCHHHHHHHHHHcCC
Q 001446 219 SGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDL 297 (1075)
Q Consensus 219 sGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~-~~~~~~~~~~~l~~~~l 297 (1075)
||||+|+|+|.|+||...|...++. ..+|.|+||.||+-.||+||+|.||...++.. ....+.++..+|..+.|
T Consensus 519 CGKSSLfRILggLWPvy~g~L~~P~-----~~~mFYIPQRPYms~gtlRDQIIYPdS~e~~~~kg~~d~dL~~iL~~v~L 593 (728)
T KOG0064|consen 519 CGKSSLFRILGGLWPVYNGLLSIPR-----PNNIFYIPQRPYMSGGTLRDQIIYPDSSEQMKRKGYTDQDLEAILDIVHL 593 (728)
T ss_pred ccHHHHHHHHhccCcccCCeeecCC-----CcceEeccCCCccCcCcccceeecCCcHHHHHhcCCCHHHHHHHHHHhhH
Confidence 9999999999999999999998876 34699999999999999999999998755432 35678889999999999
Q ss_pred hhHHhcCCC-CcccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHhcCCeEEEEecChhhHh
Q 001446 298 EYLLDRYPP-EKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVA 376 (1075)
Q Consensus 298 ~~~~~~~~~-~~~~~~g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~t~i~vtH~~~~~~ 376 (1075)
++.+.+-.. +...+|-..||||||||+++||.+|++|+..+|||.|||+.++.+..+++..+..|.+.|.|||++.+.+
T Consensus 594 ~~i~qr~~g~da~~dWkd~LsgGekQR~~mARm~yHrPkyalLDEcTsAvsidvE~~i~~~ak~~gi~llsithrpslwk 673 (728)
T KOG0064|consen 594 EHILQREGGWDAVRDWKDVLSGGEKQRMGMARMFYHRPKYALLDECTSAVSIDVEGKIFQAAKDAGISLLSITHRPSLWK 673 (728)
T ss_pred HHHHHhccChhhhccHHhhccchHHHHHHHHHHHhcCcchhhhhhhhcccccchHHHHHHHHHhcCceEEEeecCccHHH
Confidence 998887432 2344788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCeEEEEcCCCcEEEecCCC
Q 001446 377 FHDVVLSLDGEGEWRVHDKRD 397 (1075)
Q Consensus 377 ~~d~i~~l~~~g~~~~~~~~~ 397 (1075)
++.+.+..|++|+|.....+.
T Consensus 674 ~h~~ll~~dg~g~~q~~~ln~ 694 (728)
T KOG0064|consen 674 YHTHLLEFDGEGGWQFRALNT 694 (728)
T ss_pred HHHHHHhccCCCCeeeccCCh
Confidence 999999999999998765443
No 88
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.2e-47 Score=463.45 Aligned_cols=334 Identities=22% Similarity=0.267 Sum_probs=244.3
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 001446 16 EQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPF 95 (1075)
Q Consensus 16 ~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (1075)
.++.++++...+....++.++|+.|+.|+.+.+++.+..++..+...+..+..........++. ......+ .+
T Consensus 185 ~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----~~ 257 (529)
T TIGR02868 185 LARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQLLAA---GLAVLGA----LW 257 (529)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHH----HH
Confidence 4455577777888888999999999999999988887776655543332222211111111111 1111111 12
Q ss_pred hccccc-cCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCC
Q 001446 96 FAGNLK-PDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRN 174 (1075)
Q Consensus 96 ~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (1075)
+++.+. .+..+.|...++. .....++..+..+......+.......+|+.++++.+++...... .. ...
T Consensus 258 ~g~~~~~~g~~t~g~l~~~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~--~~--~~~ 327 (529)
T TIGR02868 258 AGGPAVADGTLAPATLAVLV------LLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGVV--PA--AGA 327 (529)
T ss_pred HHHHHHhCCCCChhHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCC--CC--Ccc
Confidence 222211 1222333222211 112223344455555667788888999999988765433211000 00 000
Q ss_pred CCCCCccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----cccc
Q 001446 175 YFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLN 249 (1075)
Q Consensus 175 ~~~~~~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~ 249 (1075)
..+..+.++++||+|.|++++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.+ .+++
T Consensus 328 ~~~~~~~I~~~~vsf~Y~~~~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~~~~lr 407 (529)
T TIGR02868 328 LGLGKPTLELRDLSFGYPGSPPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSLQDELR 407 (529)
T ss_pred cCCCCceEEEEEEEEecCCCCceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhHHHHHH
Confidence 11123469999999999876789999999999999999999999999999999999999999999999975 2456
Q ss_pred ccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCChhHHHHHHH
Q 001446 250 KEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGM 326 (1075)
Q Consensus 250 ~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkqRl~l 326 (1075)
++|+||||+|++|++||+|||.++.+ ..+++++.++++.+++++++.++|.+.++ ++|.+||||||||++|
T Consensus 408 ~~i~~V~Q~~~lF~~TI~eNI~~g~~------~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiai 481 (529)
T TIGR02868 408 RRISVFAQDAHLFDTTVRDNLRLGRP------DATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLAL 481 (529)
T ss_pred hheEEEccCcccccccHHHHHhccCC------CCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHH
Confidence 78999999999999999999999743 24678899999999999999999987655 5788999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecCh
Q 001446 327 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRP 372 (1075)
Q Consensus 327 Aral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~ 372 (1075)
|||++++|+++|||||||+||+++++.+.+.+++ .++|+|+||||+
T Consensus 482 ARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 482 ARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999999999999999999999999999876 389999999985
No 89
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.4e-47 Score=468.29 Aligned_cols=357 Identities=22% Similarity=0.301 Sum_probs=274.0
Q ss_pred cCcchhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 5 FSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGA 84 (1075)
Q Consensus 5 ~~~~~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (1075)
+.+...+...++.+.++++...+....++.++|+.+++|+.+.+++.+.+++..+...+..+.......+...+.. +..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 252 (571)
T TIGR02203 174 VSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIAS-LAL 252 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 3445556667778888899999999999999999999999999988888877766655444433333333332221 111
Q ss_pred HHHHHHHHhhhhccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccC
Q 001446 85 TVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIED 164 (1075)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~ 164 (1075)
++.+++.....+.+.+ +.|...++. ..+..++..+..+......+...+...+|+.++++.+++....
T Consensus 253 ~~~~~~g~~~~~~g~l-----t~g~l~a~~------~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~- 320 (571)
T TIGR02203 253 AVVLFIALFQAQAGSL-----TAGDFTAFI------TAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTG- 320 (571)
T ss_pred HHHHHHHHHHHHcCCC-----CHhHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC-
Confidence 1111111111122222 444332221 2334455666777777888999999999998877543322110
Q ss_pred CCCCCCCCCCCCCCCccEEEEeEEEEcCC-CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCC
Q 001446 165 KSPQRNGSRNYFSEANYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPG 243 (1075)
Q Consensus 165 ~~~~~~~~~~~~~~~~~i~~~~v~~~~~~-~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~ 243 (1075)
. .......+.++++||+|+|++ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 321 -~------~~~~~~~~~i~~~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g 393 (571)
T TIGR02203 321 -T------RAIERARGDVEFRNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDG 393 (571)
T ss_pred -C------CCCCCCCCeEEEEEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECC
Confidence 0 000112346999999999975 46799999999999999999999999999999999999999999999999
Q ss_pred cC------ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCC
Q 001446 244 VG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGD 314 (1075)
Q Consensus 244 ~~------~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~ 314 (1075)
.+ .+++++++||||+|++|++|++|||.++.. +..+++++.++++.++++++++++|.+.++ ++|.
T Consensus 394 ~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~-----~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~ 468 (571)
T TIGR02203 394 HDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRT-----EQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGV 468 (571)
T ss_pred EeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCC-----CCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCC
Confidence 65 346788999999999999999999998742 134678899999999999999999976544 5688
Q ss_pred CCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 315 ELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 315 ~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
+||||||||++||||++++|+++|||||||+||+++++.+++.+++ .++|+|+|||+.+.+..||+|+++++
T Consensus 469 ~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~ 542 (571)
T TIGR02203 469 LLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDD 542 (571)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeC
Confidence 9999999999999999999999999999999999999999998876 37999999999999999999999986
No 90
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4.9e-47 Score=459.89 Aligned_cols=361 Identities=22% Similarity=0.314 Sum_probs=265.7
Q ss_pred hhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 10 GKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVI 89 (1075)
Q Consensus 10 ~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (1075)
.+...+.++.++++...+.....++++|+.|+.|+.+.+++.+..++..+...+..+.......+..++. ......+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i 262 (574)
T PRK11160 186 KKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLSQALMILAN---GLTVVLM 262 (574)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHH
Confidence 3444556667778888888888999999999999999988888777666554443332222222211111 1111111
Q ss_pred HHHhhhhccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCC
Q 001446 90 LIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQR 169 (1075)
Q Consensus 90 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~~~ 169 (1075)
+ ++++.+..+..+.|...++.. +. ....+..+..+......+.+...+++|+.++++.+++......
T Consensus 263 ~----~~g~~~~~g~~t~g~l~a~~~--~~---~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~~~~---- 329 (574)
T PRK11160 263 L----WLAAGGVGGNAQPGALIALFV--FA---ALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTFPTT---- 329 (574)
T ss_pred H----HHHHHHhccccchhHHHHHHH--HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcc----
Confidence 1 222222122223443222111 11 1111233344455667788888899999998765443211000
Q ss_pred CCCCCCCCCCccEEEEeEEEEcCCC-CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC---
Q 001446 170 NGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG--- 245 (1075)
Q Consensus 170 ~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~--- 245 (1075)
. ......+.++++||+|.|+++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 330 --~-~~~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~g~~i~~ 406 (574)
T PRK11160 330 --S-TAAADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLNGQPIAD 406 (574)
T ss_pred --c-CCCCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhh
Confidence 0 001123469999999999764 579999999999999999999999999999999999999999999999975
Q ss_pred ---ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCChh
Q 001446 246 ---SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLG 319 (1075)
Q Consensus 246 ---~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgG 319 (1075)
..++++|+||||+|++|++|++|||.++.+ ..+++++.++++.+++++++++ |.+.++ +.|.+||||
T Consensus 407 ~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~------~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgG 479 (574)
T PRK11160 407 YSEAALRQAISVVSQRVHLFSATLRDNLLLAAP------NASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGG 479 (574)
T ss_pred CCHHHHHhheeEEcccchhhcccHHHHhhcCCC------ccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHH
Confidence 346788999999999999999999998753 2467789999999999999999 987665 568899999
Q ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcCCCcEEEecCCC
Q 001446 320 EQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGEGEWRVHDKRD 397 (1075)
Q Consensus 320 qkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~~~~~~~~ 397 (1075)
||||++||||++++|+++|||||||+||+++++.+.+.+.+ .++|+|+|||+++.+..+|+|++|+++ ..++.+.+
T Consensus 480 qrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G--~i~~~g~~ 557 (574)
T PRK11160 480 EQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNG--QIIEQGTH 557 (574)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCC--eEEEeCCH
Confidence 99999999999999999999999999999999999998875 489999999999999999999999863 34444444
Q ss_pred C
Q 001446 398 G 398 (1075)
Q Consensus 398 ~ 398 (1075)
+
T Consensus 558 ~ 558 (574)
T PRK11160 558 Q 558 (574)
T ss_pred H
Confidence 3
No 91
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=3.3e-47 Score=464.65 Aligned_cols=368 Identities=20% Similarity=0.213 Sum_probs=267.1
Q ss_pred cCcchhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 5 FSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGA 84 (1075)
Q Consensus 5 ~~~~~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (1075)
+.+...+...+.++.++++...+.....+++.|+.|+.++.+.+++.+..+++.+...+..+..........+... +..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 254 (588)
T PRK13657 176 VMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRAAST-ITM 254 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 3444555555556666777778888889999999999999999988888877766554433332222222222111 111
Q ss_pred HHHHHHHHhhhhccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccC
Q 001446 85 TVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIED 164 (1075)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~ 164 (1075)
+..+++....++.+.+ +.|...++. ..+..++..+..+......+.......+|+.++.+.+++...
T Consensus 255 ~~~~~~g~~~v~~g~l-----t~g~~~a~~------~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~-- 321 (588)
T PRK13657 255 LAILVLGAALVQKGQL-----RVGEVVAFV------GFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRD-- 321 (588)
T ss_pred HHHHHHHHHHHHcCCc-----CHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC--
Confidence 1111111111122332 444332221 122334445555566666777777778888776543322110
Q ss_pred CCCCCCCCCCCCCCCccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCc
Q 001446 165 KSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGV 244 (1075)
Q Consensus 165 ~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~ 244 (1075)
. . .........+.++++||+|.||+++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 322 ~--~--~~~~~~~~~~~I~~~~vsf~y~~~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~ 397 (588)
T PRK13657 322 P--P--GAIDLGRVKGAVEFDDVSFSYDNSRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGT 397 (588)
T ss_pred C--C--CCCCcCCCCCeEEEEEEEEEeCCCCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCE
Confidence 0 0 00000111246999999999986567999999999999999999999999999999999999999999999996
Q ss_pred C------ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCC
Q 001446 245 G------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDE 315 (1075)
Q Consensus 245 ~------~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~ 315 (1075)
+ ..++++|+||||+|++|++|++|||.++.+ ..+++++.++++.++++++++++|.+.++ ++|.+
T Consensus 398 ~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~------~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~ 471 (588)
T PRK13657 398 DIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRP------DATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQ 471 (588)
T ss_pred EhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCC------CCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCC
Confidence 5 346789999999999999999999998742 23577899999999999999999876543 56789
Q ss_pred CChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcCCCcEEEe
Q 001446 316 LSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGEGEWRVH 393 (1075)
Q Consensus 316 LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~~~~ 393 (1075)
||||||||++|||||+++|+++|||||||+||+++++.+++.+++ .++|+|+||||++.++.+|+|++|+++ ...+
T Consensus 472 LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G--~i~~ 549 (588)
T PRK13657 472 LSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNG--RVVE 549 (588)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECC--EEEE
Confidence 999999999999999999999999999999999999999998875 479999999999999999999999863 3444
Q ss_pred cCCCC
Q 001446 394 DKRDG 398 (1075)
Q Consensus 394 ~~~~~ 398 (1075)
.+.++
T Consensus 550 ~g~~~ 554 (588)
T PRK13657 550 SGSFD 554 (588)
T ss_pred eCCHH
Confidence 44433
No 92
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=3.3e-47 Score=462.60 Aligned_cols=361 Identities=24% Similarity=0.332 Sum_probs=267.7
Q ss_pred cHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 13 MSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILII 92 (1075)
Q Consensus 13 ~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (1075)
....++..+++...+....++.+.|+.|+.++.+.+++.+..+...+...+..+..........++. ......++.+
T Consensus 180 ~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 256 (567)
T COG1132 180 SRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLS---SLGTVLVLAL 256 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 3334444466666777777888899999999999877766665554443222222222211111111 1111111111
Q ss_pred hhhhccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCC
Q 001446 93 EPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGS 172 (1075)
Q Consensus 93 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 172 (1075)
+.+. ...+..+.|... .+...+..++..+..+......+.+...+++|+.++++.+++......
T Consensus 257 ~~~~---~~~~~~~~g~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~------- 320 (567)
T COG1132 257 GGFL---VLSGSLTVGALA------AFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPD------- 320 (567)
T ss_pred HHHH---HHcCCCCHhHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCC-------
Confidence 1111 001112333221 222334445556667777777888889999999998876443221110
Q ss_pred CCCCCCCccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------c
Q 001446 173 RNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------S 246 (1075)
Q Consensus 173 ~~~~~~~~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~ 246 (1075)
......+.|+++||+|.|++++++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.+||.+ .
T Consensus 321 -~~~~~~~~I~f~~vsf~y~~~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~ 399 (567)
T COG1132 321 -PLKDTIGSIEFENVSFSYPGKKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLD 399 (567)
T ss_pred -CCCCCCCeEEEEEEEEEcCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHH
Confidence 011223569999999999877899999999999999999999999999999999999999999999999975 4
Q ss_pred cccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCChhHHHH
Q 001446 247 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQR 323 (1075)
Q Consensus 247 ~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkqR 323 (1075)
.+|++|+||||+|++|++||+|||.++.+. .+++++.++++.+++++++.++|.+.++ +.|.+||||||||
T Consensus 400 ~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~------at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQr 473 (567)
T COG1132 400 SLRKRIGIVSQDPLLFSGTIRENIALGRPD------ATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQR 473 (567)
T ss_pred HHHHhccEEcccceeecccHHHHHhcCCCC------CCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHH
Confidence 578999999999999999999999998642 5678999999999999999999876554 4678999999999
Q ss_pred HHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcCCCcEEEecCCCCccc
Q 001446 324 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGEGEWRVHDKRDGSSV 401 (1075)
Q Consensus 324 l~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~~~~~~~~~~~~ 401 (1075)
++||||++++|+|++||||||+||++++..+.+.+++ .++|+|+|+||++.++.||+|++|+++ ..++.++|.+++
T Consensus 474 laiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G--~i~e~G~h~eLl 551 (567)
T COG1132 474 LAIARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNG--RIVERGTHEELL 551 (567)
T ss_pred HHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECC--EEEEecCHHHHH
Confidence 9999999999999999999999999999999998863 578999999999999999999999973 366666665553
No 93
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=5.7e-47 Score=457.52 Aligned_cols=352 Identities=20% Similarity=0.301 Sum_probs=261.6
Q ss_pred cchhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 7 PAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATV 86 (1075)
Q Consensus 7 ~~~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (1075)
+.+.+...+.++.++++...+....++.++|+.|+.|+.+.+++.+..++..+...+..+..........++.. +..++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 244 (529)
T TIGR02857 166 WAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFAT-LSVAL 244 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 33444555566666777778888889999999999999999888877766655543333332222222222111 11111
Q ss_pred HHHHHHhhhhccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCC
Q 001446 87 AVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKS 166 (1075)
Q Consensus 87 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~ 166 (1075)
.+ ++ .+..+..+..+.|...++ ......++..+..+......+.+....++|+.++++.+++.. ..
T Consensus 245 ~~-~~----~~~~~~~g~~t~g~~~~~------~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~---~~ 310 (529)
T TIGR02857 245 VA-VY----IGFRLLAGDLDLATGLFV------LLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLA---GK 310 (529)
T ss_pred HH-HH----HHHHHHcCCCCHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccC---CC
Confidence 00 11 111111222244432211 122233445566667777888999999999998875322111 00
Q ss_pred CCCCCCCCCCCCCccEEEEeEEEEcCCC-CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC
Q 001446 167 PQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG 245 (1075)
Q Consensus 167 ~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~ 245 (1075)
.. ......+.++++||+|.||++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 311 ----~~-~~~~~~~~i~~~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~ 385 (529)
T TIGR02857 311 ----AP-VTAAPAPSLEFSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVP 385 (529)
T ss_pred ----cC-CCCCCCCeEEEEEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEe
Confidence 00 001112469999999999864 479999999999999999999999999999999999999999999999975
Q ss_pred ------ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCC
Q 001446 246 ------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDEL 316 (1075)
Q Consensus 246 ------~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~L 316 (1075)
.+++++++||||+|++|++|++||+.++.+ ..+++++.++++.++++++++++|.+.++ ++|.+|
T Consensus 386 i~~~~~~~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~------~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~L 459 (529)
T TIGR02857 386 LADADADSWRDQIAWVPQHPFLFAGTIAENIRLARP------DASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGL 459 (529)
T ss_pred hhhCCHHHHHhheEEEcCCCcccCcCHHHHHhccCC------CCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccC
Confidence 346788999999999999999999998743 23567899999999999999999976544 578899
Q ss_pred ChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEE
Q 001446 317 SLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSL 384 (1075)
Q Consensus 317 SgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l 384 (1075)
|||||||++||||++++|+++|||||||+||+++++.+++.+++ .++|+|+||||++.++.||+|++|
T Consensus 460 SgGq~qri~laRal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 460 SGGQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 99999999999999999999999999999999999999998876 489999999999999999999875
No 94
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=7.8e-47 Score=462.21 Aligned_cols=355 Identities=20% Similarity=0.260 Sum_probs=262.1
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHh
Q 001446 15 KEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWW-FGMIQDFLLKYLGATVAVILIIE 93 (1075)
Q Consensus 15 ~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 93 (1075)
+.++..+++...+.....+.++|+.|+.|+.+.+++.+..++..+...+..+.... ...+..++...+ .++.+++
T Consensus 195 ~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-- 270 (592)
T PRK10790 195 RVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALI--LCGLLML-- 270 (592)
T ss_pred HHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH--
Confidence 33445566777788888999999999999999888777766544433222211111 111111111111 0111111
Q ss_pred hhhccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCC
Q 001446 94 PFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSR 173 (1075)
Q Consensus 94 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 173 (1075)
++ ....+..+.|...++ ......+...+..+......+.+...+++|+.++++.+++.. .. .
T Consensus 271 --~~-~~~~g~is~g~l~a~------~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~---~~-~----- 332 (592)
T PRK10790 271 --FG-FSASGTIEVGVLYAF------ISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQY---GN-D----- 332 (592)
T ss_pred --HH-HHHCCCcCHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccC---CC-C-----
Confidence 11 111222344432221 122334445566677777889999999999988875432210 00 0
Q ss_pred CCCCCCccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------cc
Q 001446 174 NYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SD 247 (1075)
Q Consensus 174 ~~~~~~~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~ 247 (1075)
......+.++++||+|.|++++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.+||.+ ..
T Consensus 333 ~~~~~~~~i~~~~v~f~y~~~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~ 412 (592)
T PRK10790 333 DRPLQSGRIDIDNVSFAYRDDNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSV 412 (592)
T ss_pred ccCCCCCeEEEEEEEEEeCCCCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHH
Confidence 011123469999999999866789999999999999999999999999999999999999999999999975 35
Q ss_pred ccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCChhHHHHH
Q 001446 248 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRL 324 (1075)
Q Consensus 248 ~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkqRl 324 (1075)
++++|+||||+|++|++|++|||.++. ..+++++.++++.++++++++++|.+.++ +.|.+||||||||+
T Consensus 413 l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-------~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRi 485 (592)
T PRK10790 413 LRQGVAMVQQDPVVLADTFLANVTLGR-------DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLL 485 (592)
T ss_pred HHhheEEEccCCccccchHHHHHHhCC-------CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 678999999999999999999999974 23577899999999999999999987554 46789999999999
Q ss_pred HHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcCCCcEEEecCCCCcc
Q 001446 325 GMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGEGEWRVHDKRDGSS 400 (1075)
Q Consensus 325 ~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~~~~~~~~~~~ 400 (1075)
+|||||+++|+++|||||||+||+++++.+.+.+++ .++|+|+||||++.++.+|+|++|++ |..++.+.++++
T Consensus 486 alARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~--G~i~~~G~~~~L 561 (592)
T PRK10790 486 ALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHR--GQAVEQGTHQQL 561 (592)
T ss_pred HHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEEC--CEEEEEcCHHHH
Confidence 999999999999999999999999999999998875 37999999999999999999999986 334454444433
No 95
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.5e-46 Score=459.43 Aligned_cols=359 Identities=22% Similarity=0.313 Sum_probs=271.0
Q ss_pred cCcchhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 5 FSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGA 84 (1075)
Q Consensus 5 ~~~~~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (1075)
+.+...+...+.++.++++...+....+++++||.+++|+.+.+++.+.+++..+...+..+...+......++.. +
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-- 254 (576)
T TIGR02204 178 FGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTAIVIVLVF-G-- 254 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H--
Confidence 4455566777778888899999999999999999999999999988888877666554433332222222111110 1
Q ss_pred HHHHHHHHhhhhccccc-cCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 001446 85 TVAVILIIEPFFAGNLK-PDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIE 163 (1075)
Q Consensus 85 ~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~ 163 (1075)
....++ ++++.+. .+..+.|...++. .....++..+..+......+.....+.+|+.++++.+++....
T Consensus 255 ~~~~~~----~~g~~~v~~g~lt~g~~~~~~------~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 324 (576)
T TIGR02204 255 AIVGVL----WVGAHDVIAGKMSAGTLGQFV------FYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAP 324 (576)
T ss_pred HHHHHH----HHHHHHHHcCCCCHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence 111111 1222111 1222444322221 2223344566777778888999999999998887644322110
Q ss_pred CCCCCCCCCCCCCCCCccEEEEeEEEEcCCC--CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEe
Q 001446 164 DKSPQRNGSRNYFSEANYIEFSGVKVVTPTG--NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAK 241 (1075)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~--~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~ 241 (1075)
... .....+..+.++++||+|.||++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+
T Consensus 325 ~~~-----~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i 399 (576)
T TIGR02204 325 AHP-----KTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILL 399 (576)
T ss_pred CCC-----ccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEE
Confidence 000 00001113469999999999753 57999999999999999999999999999999999999999999999
Q ss_pred CCcC------ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CC
Q 001446 242 PGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NW 312 (1075)
Q Consensus 242 ~~~~------~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~ 312 (1075)
||.+ ..++++|+|+||+|++|++|++|||.++.+. .+++++.++++.+++.++++++|.+.++ ++
T Consensus 400 ~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~------~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~ 473 (576)
T TIGR02204 400 DGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPD------ATDEEVEAAARAAHAHEFISALPEGYDTYLGER 473 (576)
T ss_pred CCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCC------CCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCC
Confidence 9964 3456789999999999999999999987532 3567899999999999999999876543 56
Q ss_pred CCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcCC
Q 001446 313 GDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGE 387 (1075)
Q Consensus 313 g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~ 387 (1075)
|.+||||||||++||||++++|+++|||||||+||+++++.+++.+++ .++|+|+|||+++.+..+|++++++++
T Consensus 474 g~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g 550 (576)
T TIGR02204 474 GVTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQG 550 (576)
T ss_pred CCcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECC
Confidence 889999999999999999999999999999999999999999988876 489999999999999999999999863
No 96
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-47 Score=411.95 Aligned_cols=346 Identities=22% Similarity=0.338 Sum_probs=264.2
Q ss_pred hhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccCcchhhHHH
Q 001446 32 THAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAK 111 (1075)
Q Consensus 32 ~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 111 (1075)
-|-|+||-|++|++|-++..+.-..+.+..++....-..++..|+.+.. ++...+.+++ .|+. +.+..+.|...
T Consensus 406 lNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~-lgll~gsll~--aY~V---t~q~ltVGDfV 479 (790)
T KOG0056|consen 406 LNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIG-LGLLAGSLLC--AYRV---TEQTLTVGDFV 479 (790)
T ss_pred hcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hHHhhhhhee--eeee---eecccccccee
Confidence 4889999999999999766665555444433333333344444444432 2333222221 1211 12223344322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCCCCCccEEEEeEEEEc
Q 001446 112 MLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVT 191 (1075)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~ 191 (1075)
+| ...++.+.+.+..+-..++.++.-..-.++++++++.++++.... +........+.|+|+||+|.|
T Consensus 480 lf------~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P------~a~pl~~~~G~i~fsnvtF~Y 547 (790)
T KOG0056|consen 480 LF------LTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLP------GAPPLKVTQGKIEFSNVTFAY 547 (790)
T ss_pred hH------HHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCC------CCCCccccCCeEEEEEeEEec
Confidence 22 234455555666666666667766666778888776655542211 111112235789999999999
Q ss_pred CCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEEEcCCCCCCcCC
Q 001446 192 PTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGT 265 (1075)
Q Consensus 192 ~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~~~~~t 265 (1075)
..++++|+|+||+++||+.++++||||+||||++|+|.++++..+|.|.+||+| ..+|+.||.|||+..+|+.|
T Consensus 548 ~p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdT 627 (790)
T KOG0056|consen 548 DPGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDT 627 (790)
T ss_pred CCCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecce
Confidence 889999999999999999999999999999999999999999999999999987 45789999999999999999
Q ss_pred HHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCChhHHHHHHHHHHHcCCCCEEEEeCC
Q 001446 266 LRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDEC 342 (1075)
Q Consensus 266 v~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkqRl~lAral~~~p~illLDEp 342 (1075)
+..||.|+.+. .+++++.++.+..++++.+-.+|++..+ ++|-.||||||||||+||+++++|.|++|||+
T Consensus 628 I~yNIryak~~------AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEA 701 (790)
T KOG0056|consen 628 ILYNIRYAKPS------ASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEA 701 (790)
T ss_pred eeeheeecCCC------CChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcch
Confidence 99999998643 4667899999999999999999988654 67889999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcCCCcEEEecCCCCccccc
Q 001446 343 TSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGEGEWRVHDKRDGSSVVT 403 (1075)
Q Consensus 343 ts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~~~~~~~~~~~~~~ 403 (1075)
|||||..+++.|...|.+ .++|.|+|.|+++.+-++|.|+++++ |.+++.++|.+++..
T Consensus 702 TSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~--G~IvErG~HeeLl~r 762 (790)
T KOG0056|consen 702 TSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISN--GRIVERGRHEELLKR 762 (790)
T ss_pred hhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeC--CeEeecCcHHHHHhc
Confidence 999999999999999876 59999999999999999999999986 457777777666543
No 97
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.6e-46 Score=463.29 Aligned_cols=356 Identities=21% Similarity=0.260 Sum_probs=271.4
Q ss_pred cCcchhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 5 FSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGA 84 (1075)
Q Consensus 5 ~~~~~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (1075)
+++.+.+...+..+..+++...+.....++++||.++.|+.+.+++.+.+++..+...+..+..........++.. +
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~-- 374 (694)
T TIGR01846 298 VGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQAIELIQK-L-- 374 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H--
Confidence 4455556666666777788888888889999999999999999999888877665544433332222222222111 1
Q ss_pred HHHHHHHHhhhhccccc-cCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 001446 85 TVAVILIIEPFFAGNLK-PDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIE 163 (1075)
Q Consensus 85 ~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~ 163 (1075)
....++ ++++.+. .+..+.|...++. .....++..+..+......+.....+.+|+.++++.+++....
T Consensus 375 ~~~~il----~~g~~lv~~g~it~G~lia~~------~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~ 444 (694)
T TIGR01846 375 TFAILL----WFGAHLVIGGALSPGQLVAFN------MLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA 444 (694)
T ss_pred HHHHhH----HHHHHHHHcCCCCHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC
Confidence 111111 2222221 1233455432222 2233445566677777888999999999999887654432110
Q ss_pred CCCCCCCCCCCCCCCCccEEEEeEEEEcCC-CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeC
Q 001446 164 DKSPQRNGSRNYFSEANYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKP 242 (1075)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~-~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~ 242 (1075)
. ........+.++++||+|.|++ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.+|
T Consensus 445 -~------~~~~~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~id 517 (694)
T TIGR01846 445 -G------LAALPELRGAITFENIRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVD 517 (694)
T ss_pred -C------CCCCCCCCCeEEEEEEEEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEC
Confidence 0 0001112356999999999974 4579999999999999999999999999999999999999999999999
Q ss_pred CcC------ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCC
Q 001446 243 GVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWG 313 (1075)
Q Consensus 243 ~~~------~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g 313 (1075)
|.+ .+++++|+||||+|++|++|++|||.++.+ ..+++++.++++.++++++++++|.+.++ +.|
T Consensus 518 g~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~------~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g 591 (694)
T TIGR01846 518 GVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNP------GAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKG 591 (694)
T ss_pred CEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCC------CCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCC
Confidence 975 346788999999999999999999998642 24677899999999999999999976554 567
Q ss_pred CCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 314 DELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 314 ~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
.+||||||||++||||++++|+++|||||||+||+++++.+.+.+++ .++|+|+|||+++.++.+|+|++|++
T Consensus 592 ~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~ 666 (694)
T TIGR01846 592 ANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEK 666 (694)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeC
Confidence 89999999999999999999999999999999999999999998876 47999999999999999999999986
No 98
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8e-48 Score=379.13 Aligned_cols=197 Identities=28% Similarity=0.382 Sum_probs=173.7
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-------ccccccEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-------SDLNKEIF 253 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-------~~~~~~i~ 253 (1075)
.|+++|++++|. +..+|+++|++|++||+++|+||||||||||||+|.|+.+|++|+|.++|.+ ..+|+++|
T Consensus 2 mi~i~~l~K~fg-~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~vG 80 (240)
T COG1126 2 MIEIKNLSKSFG-DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKVG 80 (240)
T ss_pred eEEEEeeeEEeC-CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhcC
Confidence 589999999995 6789999999999999999999999999999999999999999999999953 24678999
Q ss_pred EEcCCCCCCc-CCHHHHhcCCCCC-CcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHc
Q 001446 254 YVPQRPYTAV-GTLRDQLIYPLTS-DQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 254 ~v~Q~~~~~~-~tv~~ni~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~ 331 (1075)
+|||+..+|+ .|+.||+.++... .+.......+...+.|+++||.+..+.+| .+|||||||||||||||+
T Consensus 81 mVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP--------~qLSGGQqQRVAIARALa 152 (240)
T COG1126 81 MVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP--------AQLSGGQQQRVAIARALA 152 (240)
T ss_pred eecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc--------cccCcHHHHHHHHHHHHc
Confidence 9999999887 5999999986432 12222234456778999999999999999 799999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHH---HhcCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKV---RAMGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l---~~~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
.+|+++|+|||||||||+...++.+.+ .+.|.|.|+|||++.+++ .+|||+.||+
T Consensus 153 M~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~ 211 (240)
T COG1126 153 MDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQ 211 (240)
T ss_pred CCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeC
Confidence 999999999999999999998877654 457999999999999986 5899999986
No 99
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.3e-45 Score=443.85 Aligned_cols=349 Identities=21% Similarity=0.292 Sum_probs=260.6
Q ss_pred hhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 10 GKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVI 89 (1075)
Q Consensus 10 ~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (1075)
.+...+.++..+++...+....+++++||.|+.|+.+.+++.+.+++..+...+..+..........++.. +..+ .+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~ 242 (544)
T TIGR01842 166 KKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRI-VLQS--LV 242 (544)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH--HH
Confidence 33444455566677777788888999999999999999888888777665544333322222221111111 1111 11
Q ss_pred HHHhhhhccccc-cCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCC
Q 001446 90 LIIEPFFAGNLK-PDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQ 168 (1075)
Q Consensus 90 ~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~~ 168 (1075)
+ ++++.+. .+..+.|...++ ...+..++..+..+......+.+...+.+|+.++++.+++... .
T Consensus 243 ~----~~g~~l~~~g~it~g~l~a~------~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~--~--- 307 (544)
T TIGR01842 243 L----GLGAYLAIDGEITPGMMIAG------SILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDP--A--- 307 (544)
T ss_pred H----HHHHHHHHcCCCCHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC--C---
Confidence 1 1222211 122244433221 2223344556677777788889999999999988765432210 0
Q ss_pred CCCCCCCCCCCccEEEEeEEEEcCCC-CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC--
Q 001446 169 RNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-- 245 (1075)
Q Consensus 169 ~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-- 245 (1075)
. ......+.++++|++|.|+++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 308 --~--~~~~~~~~i~~~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~ 383 (544)
T TIGR01842 308 --M--PLPEPEGHLSVENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLK 383 (544)
T ss_pred --C--CCCCCCCeEEEEEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehh
Confidence 0 001123469999999999753 689999999999999999999999999999999999999999999999965
Q ss_pred ----ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCCh
Q 001446 246 ----SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSL 318 (1075)
Q Consensus 246 ----~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSg 318 (1075)
..+++.++||||+|++|++|++||+.++.+ ..+++++.++++.++++++++++|.+.++ ++|.+|||
T Consensus 384 ~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~------~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSg 457 (544)
T TIGR01842 384 QWDRETFGKHIGYLPQDVELFPGTVAENIARFGE------NADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSG 457 (544)
T ss_pred hCCHHHHhhheEEecCCcccccccHHHHHhccCC------CCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCH
Confidence 235678999999999999999999986432 24567888999999999999999876443 56889999
Q ss_pred hHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 319 GEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 319 GqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
|||||++||||++++|+++|||||||+||+++++.+.+.+++ .++|+|+|||+++.+..||+|+++++
T Consensus 458 Gq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~ 528 (544)
T TIGR01842 458 GQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQD 528 (544)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999998865 47999999999999999999999986
No 100
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=3e-45 Score=444.84 Aligned_cols=356 Identities=19% Similarity=0.187 Sum_probs=257.5
Q ss_pred cchhhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 7 PAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATV 86 (1075)
Q Consensus 7 ~~~~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (1075)
+...+...+.++..+++...+....+++++|+.|+.|+.+.+++.+..++..+...+..+..........++. .+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 254 (585)
T TIGR01192 178 QRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNRMAS-TISM-- 254 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH--
Confidence 3333344444455566667777778899999999999999988888777665554333322222211111111 1111
Q ss_pred HHHHHHhhhhccccc-cCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCC
Q 001446 87 AVILIIEPFFAGNLK-PDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDK 165 (1075)
Q Consensus 87 ~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~ 165 (1075)
..+++ +++.+. .+..+.|...++. ..+..++..+..+......+.......+|+.++.+.+++......
T Consensus 255 ~~v~~----~g~~~v~~g~it~g~l~a~~------~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~ 324 (585)
T TIGR01192 255 MCILV----IGTVLVIKGELSVGEVIAFI------GFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPAD 324 (585)
T ss_pred HHHHH----HHHHHHHcCCCCHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcc
Confidence 11111 122111 1222444332221 122233344555666667778888888998887654332111000
Q ss_pred CCCCCCCCCCCCCCccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC
Q 001446 166 SPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG 245 (1075)
Q Consensus 166 ~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~ 245 (1075)
........+.++++||+|.|++++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 325 ------~~~~~~~~~~i~~~~v~~~y~~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~ 398 (585)
T TIGR01192 325 ------APELPNVKGAVEFRHITFEFANSSQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGID 398 (585)
T ss_pred ------CCCCCCCCCeEEEEEEEEECCCCCccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEE
Confidence 00001113469999999999866679999999999999999999999999999999999999999999999964
Q ss_pred ------ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCC
Q 001446 246 ------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDEL 316 (1075)
Q Consensus 246 ------~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~L 316 (1075)
..+++.++||||+|++|++|++||+.++.+ ..+++++.++++.+++++++.++|.+.++ ++|.+|
T Consensus 399 ~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~------~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~L 472 (585)
T TIGR01192 399 INTVTRESLRKSIATVFQDAGLFNRSIRENIRLGRE------GATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRL 472 (585)
T ss_pred hhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCC------CCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCC
Confidence 245678999999999999999999998743 23567788999999999999888875443 568899
Q ss_pred ChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcCC
Q 001446 317 SLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGE 387 (1075)
Q Consensus 317 SgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~ 387 (1075)
|||||||++|||||+++|+++|||||||+||+++++.+.+.+.+ .++|+|+|||+++.+..+|+|++|+++
T Consensus 473 SgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G 545 (585)
T TIGR01192 473 SGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQG 545 (585)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECC
Confidence 99999999999999999999999999999999999999998865 489999999999999999999999863
No 101
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4.1e-45 Score=443.13 Aligned_cols=350 Identities=17% Similarity=0.201 Sum_probs=256.2
Q ss_pred hhhcHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 10 GKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVI 89 (1075)
Q Consensus 10 ~~~~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (1075)
.+...+.++..+++...+.....+.++||.|+.|+.+.+++.+..++..+...+..+..... ..............+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 238 (569)
T PRK10789 162 HERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARF---DPTIYIAIGMANLLA 238 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 33344445555666667777778899999999999999888877765544433322222111 111111011111111
Q ss_pred HHHhhhhccccc-cCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCC
Q 001446 90 LIIEPFFAGNLK-PDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQ 168 (1075)
Q Consensus 90 ~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~~ 168 (1075)
++ +++.+. .+..+.|...++.. ....++..+..+......+.+...+.+|+.++++.+++.....
T Consensus 239 l~----~g~~lv~~g~lt~g~l~a~~~------~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~---- 304 (569)
T PRK10789 239 IG----GGSWMVVNGSLTLGQLTSFVM------YLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS---- 304 (569)
T ss_pred HH----HHHHHHHcCCcCHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC----
Confidence 11 111111 12224443322211 1223334455566667788888999999998876543211100
Q ss_pred CCCCCCCCCCCccEEEEeEEEEcCCC-CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC--
Q 001446 169 RNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-- 245 (1075)
Q Consensus 169 ~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-- 245 (1075)
.......+.++++|++|.|+++ +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 305 ----~~~~~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~ 380 (569)
T PRK10789 305 ----EPVPEGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLT 380 (569)
T ss_pred ----CCCCCCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHh
Confidence 0001123469999999999753 579999999999999999999999999999999999999999999999975
Q ss_pred ----ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCCh
Q 001446 246 ----SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSL 318 (1075)
Q Consensus 246 ----~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSg 318 (1075)
..++++++|+||+|++|++|++|||.++.+ ..+++++.++++.+++++++.++|.+.++ +.|.+|||
T Consensus 381 ~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~------~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSg 454 (569)
T PRK10789 381 KLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRP------DATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSG 454 (569)
T ss_pred hCCHHHHHhheEEEccCCeeccccHHHHHhcCCC------CCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCH
Confidence 245678999999999999999999998743 23567888999999999999999876544 56789999
Q ss_pred hHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 319 GEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 319 GqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
|||||++||||++++|+++|||||||+||+++++.+.+.+++ .++|+|+|||+++.++.+|+|++|++
T Consensus 455 Gq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~ 524 (569)
T PRK10789 455 GQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQH 524 (569)
T ss_pred HHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeC
Confidence 999999999999999999999999999999999999998875 58999999999999999999999986
No 102
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.6e-44 Score=394.79 Aligned_cols=336 Identities=23% Similarity=0.300 Sum_probs=253.5
Q ss_pred HHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccc-
Q 001446 24 RQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKP- 102 (1075)
Q Consensus 24 r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 102 (1075)
.......+.|+|.|++.|....-.++|.+..........+.-..+..++.....+-..+... ++- .+..+..
T Consensus 198 ~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~---iLg----~GA~Lvi~ 270 (580)
T COG4618 198 NQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSA---VLG----LGAWLVIK 270 (580)
T ss_pred HHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH---HHh----cceeeEEc
Confidence 34677788899999999999999999988877665554433333333333322222111111 111 1222222
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCCCCCccE
Q 001446 103 DTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYI 182 (1075)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 182 (1075)
+..+.|. +++.- -...-....+-..+..++.+...+.+.+|+.+++...+.... ....+.+.+.+
T Consensus 271 ge~t~G~--mIA~S----Il~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~---------~m~LP~P~g~L 335 (580)
T COG4618 271 GEITPGM--MIAGS----ILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAE---------RMPLPAPQGAL 335 (580)
T ss_pred CcCCcch--hhHHH----HHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccC---------CCCCCCCCcee
Confidence 2223332 22110 011122233445667788888888889999888765443211 01112235689
Q ss_pred EEEeEEEEcCC-CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEEE
Q 001446 183 EFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYV 255 (1075)
Q Consensus 183 ~~~~v~~~~~~-~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v 255 (1075)
.++++++..|+ .+++++++||++++||.++|+||||||||||.|+|.|.|+|.+|.|++||-+ ..+.++|||+
T Consensus 336 ~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYL 415 (580)
T COG4618 336 SVERLTAAPPGQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYL 415 (580)
T ss_pred eEeeeeecCCCCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcC
Confidence 99999998775 4589999999999999999999999999999999999999999999999965 3456899999
Q ss_pred cCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCChhHHHHHHHHHHHcC
Q 001446 256 PQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYH 332 (1075)
Q Consensus 256 ~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkqRl~lAral~~ 332 (1075)
||+-.+|.|||.|||+-.. ++.+.+.+.++.+..+.++++-++|+++++ +.|..|||||||||+||||||.
T Consensus 416 PQdVeLF~GTIaeNIaRf~------~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG 489 (580)
T COG4618 416 PQDVELFDGTIAENIARFG------EEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYG 489 (580)
T ss_pred cccceecCCcHHHHHHhcc------ccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcC
Confidence 9999999999999997432 234667899999999999999999998877 4578999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHH---HhcCCeEEEEecChhhHhhCCeEEEEcCC
Q 001446 333 KPKFAILDECTSAVTTDMEERFCAKV---RAMGTSCITISHRPALVAFHDVVLSLDGE 387 (1075)
Q Consensus 333 ~p~illLDEpts~LD~~~~~~i~~~l---~~~~~t~i~vtH~~~~~~~~d~i~~l~~~ 387 (1075)
+|.+++||||-|+||.+.|..+.+.+ ++.|.|+|+|||+++.+..+|+|++|+++
T Consensus 490 ~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G 547 (580)
T COG4618 490 DPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDG 547 (580)
T ss_pred CCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCC
Confidence 99999999999999999999998876 45799999999999999999999999863
No 103
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.2e-46 Score=377.73 Aligned_cols=199 Identities=28% Similarity=0.359 Sum_probs=176.8
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-ccccccEEEEcCCC
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-SDLNKEIFYVPQRP 259 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-~~~~~~i~~v~Q~~ 259 (1075)
.++++++++.|++ ..+|+|+||+|++||+++|+||||||||||||+|+|+.+|++|+|.++|.. .....+++||||++
T Consensus 3 ~l~i~~v~~~f~~-~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vFQ~~ 81 (248)
T COG1116 3 LLEIEGVSKSFGG-VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVFQED 81 (248)
T ss_pred eEEEEeeEEEeCc-eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEeccC
Confidence 5889999999964 789999999999999999999999999999999999999999999999964 34456899999999
Q ss_pred CCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCEEE
Q 001446 260 YTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAI 338 (1075)
Q Consensus 260 ~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~ill 338 (1075)
.+++ .||+||+.++............+++.++|+.+||.++.+++| .+|||||||||||||||+.+|++|+
T Consensus 82 ~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P--------~qLSGGMrQRVaiARAL~~~P~lLL 153 (248)
T COG1116 82 ALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP--------HQLSGGMRQRVAIARALATRPKLLL 153 (248)
T ss_pred cccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc--------cccChHHHHHHHHHHHHhcCCCEEE
Confidence 8776 699999999987644333344567889999999999999999 7999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHH----hcCCeEEEEecChhhH-hhCCeEEEEcCCC
Q 001446 339 LDECTSAVTTDMEERFCAKVR----AMGTSCITISHRPALV-AFHDVVLSLDGEG 388 (1075)
Q Consensus 339 LDEpts~LD~~~~~~i~~~l~----~~~~t~i~vtH~~~~~-~~~d~i~~l~~~g 388 (1075)
||||++|||..++..+.+.+. +.++|+++||||.+.. ..+|||++|.+..
T Consensus 154 lDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P 208 (248)
T COG1116 154 LDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRP 208 (248)
T ss_pred EcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCC
Confidence 999999999999998887654 4689999999999876 5699999998753
No 104
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.6e-44 Score=472.63 Aligned_cols=359 Identities=18% Similarity=0.243 Sum_probs=258.5
Q ss_pred HHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccc
Q 001446 23 YRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKP 102 (1075)
Q Consensus 23 ~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 102 (1075)
+-..+....++.++|+.|+.|+.+.+++.+..+...+..........|......++...+...++++.+.. .+.+.
T Consensus 1136 l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~-~~~~~--- 1211 (1560)
T PTZ00243 1136 VFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIG-TMLRA--- 1211 (1560)
T ss_pred HHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcc---
Confidence 34566777788999999999999998887777766655444344445554443333222111111111111 11111
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccC--C-------------C-
Q 001446 103 DTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIED--K-------------S- 166 (1075)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~--~-------------~- 166 (1075)
+..+.|... .+......+...+..+......+......++|+.++++..++..... . +
T Consensus 1212 ~~~~~g~l~------~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 1285 (1560)
T PTZ00243 1212 TSQEIGLVS------LSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADV 1285 (1560)
T ss_pred CCCCHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccccccccccccccccc
Confidence 111222111 11122233444555666666778888888899988875322211000 0 0
Q ss_pred -----CCCCCCC---CCCCCCccEEEEeEEEEcCCC-CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCcc
Q 001446 167 -----PQRNGSR---NYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSG 237 (1075)
Q Consensus 167 -----~~~~~~~---~~~~~~~~i~~~~v~~~~~~~-~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G 237 (1075)
....... ...+..+.|+|+||+|+|+++ .++|+|+||+|++||+++|+|++|||||||+++|+|+++|++|
T Consensus 1286 ~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G 1365 (1560)
T PTZ00243 1286 TGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGG 1365 (1560)
T ss_pred ccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCc
Confidence 0000000 011123579999999999765 4599999999999999999999999999999999999999999
Q ss_pred EEEeCCcC------ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc-
Q 001446 238 HIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI- 310 (1075)
Q Consensus 238 ~i~~~~~~------~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~- 310 (1075)
+|.+||.+ .++|++|+||||+|.+|++|||+||.... ..++++++++++.+++++++.++|.+.++
T Consensus 1366 ~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~-------~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~ 1438 (1560)
T PTZ00243 1366 EIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFL-------EASSAEVWAALELVGLRERVASESEGIDSR 1438 (1560)
T ss_pred EEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCccc-------CCCHHHHHHHHHHCCChHHHhhCccccccc
Confidence 99999976 35788999999999999999999996431 34678899999999999999999876554
Q ss_pred --CCCCCCChhHHHHHHHHHHHcCC-CCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEc
Q 001446 311 --NWGDELSLGEQQRLGMARLFYHK-PKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLD 385 (1075)
Q Consensus 311 --~~g~~LSgGqkqRl~lAral~~~-p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~ 385 (1075)
+.|.+||||||||++|||||+++ |+|||||||||+||+++++.+.+.+++ .++|+|+|+||++.+..||+|++|+
T Consensus 1439 vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd 1518 (1560)
T PTZ00243 1439 VLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMD 1518 (1560)
T ss_pred ccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEE
Confidence 56889999999999999999996 899999999999999999999999876 4899999999999999999999998
Q ss_pred CCCcEEEecCCCCcc
Q 001446 386 GEGEWRVHDKRDGSS 400 (1075)
Q Consensus 386 ~~g~~~~~~~~~~~~ 400 (1075)
+ |..++.+.+.++
T Consensus 1519 ~--G~VvE~Gt~~eL 1531 (1560)
T PTZ00243 1519 H--GAVAEMGSPREL 1531 (1560)
T ss_pred C--CEEEEECCHHHH
Confidence 6 345555544433
No 105
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-46 Score=386.80 Aligned_cols=205 Identities=27% Similarity=0.366 Sum_probs=183.3
Q ss_pred cEEEEeEEEEcCCC----CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC---------cc
Q 001446 181 YIEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG---------SD 247 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~----~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~---------~~ 247 (1075)
+|++++|++.|+.+ .++|+|+||+|++||+.+|+|.||+|||||+|++.++..|++|+|.++|.+ ..
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 47899999998752 469999999999999999999999999999999999999999999999964 23
Q ss_pred ccccEEEEcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHH
Q 001446 248 LNKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 326 (1075)
Q Consensus 248 ~~~~i~~v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~l 326 (1075)
.|++||++||++.++. .||.+|++||+......+.....++.++|+.+||.+..+++| .+|||||||||+|
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP--------~qLSGGQKQRVaI 152 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP--------AQLSGGQKQRVAI 152 (339)
T ss_pred HHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc--------hhcCcchhhHHHH
Confidence 5789999999999887 699999999988766444455678899999999999999999 7999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcCCCcEEEecC
Q 001446 327 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGEGEWRVHDK 395 (1075)
Q Consensus 327 Aral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~~g~~~~~~~ 395 (1075)
||||+.+|+|||.|||||||||++.+.|++.|++ .|.|+++|||.++.++ .||++.+|++ |..++.+
T Consensus 153 ARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~--G~lvE~G 224 (339)
T COG1135 153 ARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQ--GRLVEEG 224 (339)
T ss_pred HHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeC--CEEEEec
Confidence 9999999999999999999999999999998864 5999999999999996 6999999986 3344433
No 106
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=3.9e-44 Score=472.85 Aligned_cols=352 Identities=18% Similarity=0.205 Sum_probs=257.2
Q ss_pred HHHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cccc
Q 001446 22 EYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFF-AGNL 100 (1075)
Q Consensus 22 ~~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l 100 (1075)
.+-..+.....+.++|++|+.|+.+.++..+..+...+..........|++....++. .++..++.....+ .+.+
T Consensus 1142 ~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~~~~ 1217 (1522)
T TIGR00957 1142 PVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVRLECVG----NCIVLFAALFAVISRHSL 1217 (1522)
T ss_pred HHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhcCCC
Confidence 3334566677889999999999988776666655544443332333334433322221 1111111100011 1222
Q ss_pred ccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCCCCCc
Q 001446 101 KPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEAN 180 (1075)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1075)
+.|... .+......+...+..+...+..++....+++|+.++.+.+++...... .......++..+
T Consensus 1218 -----~~g~l~------~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~---~~~~~~~wp~~g 1283 (1522)
T TIGR00957 1218 -----SAGLVG------LSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQ---ETAPPSGWPPRG 1283 (1522)
T ss_pred -----CHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccc---CCCCCCCCCCCC
Confidence 223211 111222334445566677778888888999999998765443211000 000011123346
Q ss_pred cEEEEeEEEEcCCC-CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEE
Q 001446 181 YIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIF 253 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~-~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~ 253 (1075)
.|+|+||+++|+++ .++|+|+||+|++||++||||++|||||||+++|.|+++|++|+|.+||.+ .++|++|+
T Consensus 1284 ~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~ 1363 (1522)
T TIGR00957 1284 RVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKIT 1363 (1522)
T ss_pred cEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCe
Confidence 79999999999754 579999999999999999999999999999999999999999999999976 35788999
Q ss_pred EEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCChhHHHHHHHHHHH
Q 001446 254 YVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLF 330 (1075)
Q Consensus 254 ~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkqRl~lAral 330 (1075)
||||+|.+|++|||+||... ...++++++++++.+++++++.++|.+.++ +.|.+||||||||++|||||
T Consensus 1364 iVpQdp~LF~gTIr~NLdp~-------~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARAL 1436 (1522)
T TIGR00957 1364 IIPQDPVLFSGSLRMNLDPF-------SQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLARAL 1436 (1522)
T ss_pred EECCCCcccCccHHHHcCcc-------cCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHH
Confidence 99999999999999999732 124678899999999999999999876554 56789999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcCCCcEEEecCCCCcc
Q 001446 331 YHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGEGEWRVHDKRDGSS 400 (1075)
Q Consensus 331 ~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~~~~~~~~~~~ 400 (1075)
+++|+|||||||||+||.++++.+.+.+++ .++|+|+|+||++.+..+|+|++|++ |..++.+.+.++
T Consensus 1437 Lr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~--G~IvE~G~~~eL 1506 (1522)
T TIGR00957 1437 LRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDK--GEVAEFGAPSNL 1506 (1522)
T ss_pred HcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEEC--CEEEEECCHHHH
Confidence 999999999999999999999999999976 48999999999999999999999986 345555554443
No 107
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=6.2e-44 Score=392.31 Aligned_cols=181 Identities=23% Similarity=0.261 Sum_probs=137.5
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEc
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 915 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~Vp 915 (1075)
.|.|+||+|.|++++.++++++|-|.++++||+|||+|+|||||++++.+...|..|.|....+ .+++...
T Consensus 389 vi~~~nv~F~y~~~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H---------~~~~~y~ 459 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSH---------NKLPRYN 459 (614)
T ss_pred eEEEeccccCCCCcchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccccccccccccc---------ccchhhh
Confidence 5899999999998888999999999999999999999999999999999999999999864333 1233223
Q ss_pred CCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCccccccc-ccchHHHHHHHHhCCchhhhhhhccCCccccccccCCC
Q 001446 916 QRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTT-NILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 994 (1075)
Q Consensus 916 QdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~-~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 994 (1075)
|. ..+.++|-....+-...+. + ....+++..+|...||... .....-++||
T Consensus 460 Qh-------~~e~ldl~~s~le~~~~~~------------~~~~~~e~~r~ilgrfgLtgd---------~q~~p~~~LS 511 (614)
T KOG0927|consen 460 QH-------LAEQLDLDKSSLEFMMPKF------------PDEKELEEMRSILGRFGLTGD---------AQVVPMSQLS 511 (614)
T ss_pred hh-------hHhhcCcchhHHHHHHHhc------------cccchHHHHHHHHHHhCCCcc---------ccccchhhcc
Confidence 32 2233333211111111111 1 1234567777888777421 1111235799
Q ss_pred hhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHhcCceEEEecCCCCchh
Q 001446 995 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIP 1053 (1075)
Q Consensus 995 gGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~~~~TvI~IaHRls~i~ 1053 (1075)
+|||-|+++||++++.|.||||||||++||.++...+.+.+.+..-+||.|+|...+|.
T Consensus 512 ~Gqr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~~Ggvv~vSHDfrlI~ 570 (614)
T KOG0927|consen 512 DGQRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEFPGGVVLVSHDFRLIS 570 (614)
T ss_pred cccchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhccCCceeeeechhhHHH
Confidence 99999999999999999999999999999999999999999888889999999987664
No 108
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.7e-44 Score=369.57 Aligned_cols=198 Identities=30% Similarity=0.416 Sum_probs=170.7
Q ss_pred EEEEeEEEEcCCC---CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC---------c-cc
Q 001446 182 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG---------S-DL 248 (1075)
Q Consensus 182 i~~~~v~~~~~~~---~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~---------~-~~ 248 (1075)
++++||++.|..+ .++|+++||+|++||+++|+|||||||||||++|.|+..|++|.|.++|.+ . -.
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 5789999988643 379999999999999999999999999999999999999999999999954 1 12
Q ss_pred cccEEEEcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHh-cCCCCcccCCCCCCChhHHHHHHH
Q 001446 249 NKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLD-RYPPEKEINWGDELSLGEQQRLGM 326 (1075)
Q Consensus 249 ~~~i~~v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~~~~~~g~~LSgGqkqRl~l 326 (1075)
+++||||||+..+.+ .|++||+.+|.............+..++++.+||.+... +.| .+|||||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p--------~eLSGGqqQRVAI 153 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKP--------SELSGGQQQRVAI 153 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCc--------hhcCHHHHHHHHH
Confidence 467999999998655 699999998754433222123456778899999997777 667 6999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHhhCCeEEEEcCC
Q 001446 327 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDGE 387 (1075)
Q Consensus 327 Aral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~~~d~i~~l~~~ 387 (1075)
||||+.+|+++|.||||.+||.++.+.+++.+++ .|+|+|+||||+....+|||++.+.++
T Consensus 154 ARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG 218 (226)
T COG1136 154 ARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDG 218 (226)
T ss_pred HHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCC
Confidence 9999999999999999999999999999988764 488999999999999999999999864
No 109
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=6.5e-45 Score=364.97 Aligned_cols=197 Identities=27% Similarity=0.373 Sum_probs=174.8
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 254 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 254 (1075)
+|+|+||++.|. ++.+++|+||+|++||+++++|||||||||+||+|.++++|++|+|.++|.+ .++|++|||
T Consensus 1 MI~~~nvsk~y~-~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 1 MIEFENVSKRYG-NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred CceeeeeehhcC-CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 479999999996 6789999999999999999999999999999999999999999999999975 357899999
Q ss_pred EcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCCh--hHHhcCCCCcccCCCCCCChhHHHHHHHHHHHc
Q 001446 255 VPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE--YLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 255 v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~ 331 (1075)
|-|..-+|+ .||.|||.+-....+..+...++++.+.++.++|+ ++.+++| ++|||||||||.+||||+
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP--------~eLSGGQQQRVGv~RALA 151 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYP--------HELSGGQQQRVGVARALA 151 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCc--------hhcCcchhhHHHHHHHHh
Confidence 999987766 69999998754433333334567788999999996 4899999 799999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHH----hcCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKVR----AMGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l~----~~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
.+|+++|||||++||||-++..+.+.++ +.++|+|+||||++.. +.+|+|.+|++
T Consensus 152 adP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~ 211 (309)
T COG1125 152 ADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDA 211 (309)
T ss_pred cCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecC
Confidence 9999999999999999999999888764 3599999999999875 78999999985
No 110
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.6e-44 Score=346.90 Aligned_cols=198 Identities=26% Similarity=0.357 Sum_probs=178.1
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC---------cccccc
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG---------SDLNKE 251 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~---------~~~~~~ 251 (1075)
+|+|+||++.|+++.++|+|+||+|++||++.|+||||||||||+|+|.+..+|++|+|.++|.+ .-+|++
T Consensus 1 mI~f~~V~k~Y~~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 1 MIRFENVSKAYPGGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred CeeehhhhhhcCCCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 47899999999999889999999999999999999999999999999999999999999999975 135789
Q ss_pred EEEEcCCCCCC-cCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHH
Q 001446 252 IFYVPQRPYTA-VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 330 (1075)
Q Consensus 252 i~~v~Q~~~~~-~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral 330 (1075)
||+|||+.-+. ..||.||++|+....+.......+++.++|+.+||.+....+| .+||||||||++||||+
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP--------~~LSGGEQQRvaIARAi 152 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP--------SQLSGGEQQRVAIARAI 152 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc--------cccCchHHHHHHHHHHH
Confidence 99999998765 4699999999987655544455678889999999999999999 69999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHhh-CCeEEEEcC
Q 001446 331 YHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAF-HDVVLSLDG 386 (1075)
Q Consensus 331 ~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~~-~d~i~~l~~ 386 (1075)
+.+|++||.||||.+|||....+|++.+.+ .|+||++.|||.+++.. -.+++.+++
T Consensus 153 V~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~ 212 (223)
T COG2884 153 VNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALED 212 (223)
T ss_pred ccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeC
Confidence 999999999999999999999998887754 69999999999999975 467788875
No 111
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-43 Score=378.39 Aligned_cols=348 Identities=21% Similarity=0.314 Sum_probs=262.0
Q ss_pred HHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hhccccccC
Q 001446 26 LHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEP--FFAGNLKPD 103 (1075)
Q Consensus 26 ~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~ 103 (1075)
.++.+. |=|+||.|+.|+.|..++....+...+...+......++++.|..+... ....+++..+ ...+.+
T Consensus 125 aidsLl-nfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~~Ln~gQ~~I~~~---~l~~~m~~s~~~v~~g~~--- 197 (497)
T COG5265 125 AIDSLL-NFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLLVLNFGQTAIFST---GLRVMMTMSALGVEEGQL--- 197 (497)
T ss_pred HHHHHh-hhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHH---HHHHHHhhcHHHHhhccC---
Confidence 444443 7889999999999998777666665555444443445555555544321 1111111111 223333
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCC-CCCccE
Q 001446 104 TSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYF-SEANYI 182 (1075)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i 182 (1075)
+.|.......+ +......+..+..++..+.+...-.++++++.+.+.+...... . ...+ ...+.+
T Consensus 198 --TvgD~V~~Nal------l~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~d~pd-a-----~~L~~~~~g~v 263 (497)
T COG5265 198 --TVGDLVNVNAL------LFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVSDAPD-A-----PPLWPVRLGAV 263 (497)
T ss_pred --CchhHHhHHHH------HhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhccCCC-C-----ccccccccceE
Confidence 44433222221 1222223334455667777777667777666554443321100 0 0111 234679
Q ss_pred EEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEEEc
Q 001446 183 EFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVP 256 (1075)
Q Consensus 183 ~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~ 256 (1075)
.|+||+|.|...+++|+++||++++|+.++|+||+|+||||++++|.+++++++|.|.++|++ ..+|+.||.||
T Consensus 264 ~F~~V~F~y~~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I~id~qdir~vtq~slR~aIg~VP 343 (497)
T COG5265 264 AFINVSFAYDPRRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSITIDGQDIRDVTQQSLRRAIGIVP 343 (497)
T ss_pred EEEEEEeeccccchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceEEEcchhHHHhHHHHHHHHhCcCc
Confidence 999999999888999999999999999999999999999999999999999999999999986 35788999999
Q ss_pred CCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCChhHHHHHHHHHHHcCC
Q 001446 257 QRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHK 333 (1075)
Q Consensus 257 Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkqRl~lAral~~~ 333 (1075)
|+..+|+.|+..|+.|+.+ ..+++++..+++.+.+++++..+|.+..+ ++|-.|||||||||||||+++++
T Consensus 344 QDtvLFNDti~yni~ygr~------~at~eev~aaa~~aqi~~fi~~lP~gy~t~VgerglklSggekqrvaiar~ilk~ 417 (497)
T COG5265 344 QDTVLFNDTIAYNIKYGRP------DATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKLSGGEKQRVAIARTILKN 417 (497)
T ss_pred ccceehhhhHHHHHhccCc------cccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeeccCchHHHHHHHHHHhcC
Confidence 9999999999999999864 35677899999999999999999987654 67889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcCCCcEEEecCCCCcccc
Q 001446 334 PKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGEGEWRVHDKRDGSSVV 402 (1075)
Q Consensus 334 p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~~~~~~~~~~~~~ 402 (1075)
|+|++|||+||+||.++++.++..|++ .|+|.++|.|+++.+..+|.|+++++ |.+++.++|.+++.
T Consensus 418 p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~--g~i~erg~h~~ll~ 486 (497)
T COG5265 418 PPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDN--GRIVERGTHEELLA 486 (497)
T ss_pred CCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeC--CEEEecCcHHHHHH
Confidence 999999999999999999999999986 59999999999999999999999997 45777777766643
No 112
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=2.6e-42 Score=454.04 Aligned_cols=352 Identities=19% Similarity=0.268 Sum_probs=252.4
Q ss_pred HHHHHHHHHhhHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccc
Q 001446 23 YRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKP 102 (1075)
Q Consensus 23 ~r~~l~~i~~~~e~I~~~~~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 102 (1075)
+...+.....+.++|++|+.|+.+.+++.+..+...+.+........|+.....++...+...+ .++. ++....
T Consensus 1063 l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~-~~l~----~~~~~~- 1136 (1490)
T TIGR01271 1063 IFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTLRWFQMRIDIIFVFFFIAV-TFIA----IGTNQD- 1136 (1490)
T ss_pred HHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH----HHHhcC-
Confidence 3345666678899999999999999888877765444443333333444433332221111111 1111 111111
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCC-----------CCCC
Q 001446 103 DTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSP-----------QRNG 171 (1075)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~-----------~~~~ 171 (1075)
+....|.. +. ....+...+..+......+.....+++|+.++.+.+++........ ....
T Consensus 1137 ~~g~~g~~--l~-------~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 1207 (1490)
T TIGR01271 1137 GEGEVGII--LT-------LAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPH 1207 (1490)
T ss_pred CccHHHHH--HH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccCC
Confidence 11122211 11 1122223344455556677777888899988876544321100000 0000
Q ss_pred CCCCCCCCccEEEEeEEEEcCC-CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----
Q 001446 172 SRNYFSEANYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----- 245 (1075)
Q Consensus 172 ~~~~~~~~~~i~~~~v~~~~~~-~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~----- 245 (1075)
....++..+.|+|+||+++|++ .+++|+|+||+|++||+++|+|+||||||||+++|+|+++ .+|+|.+||.+
T Consensus 1208 ~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~ 1286 (1490)
T TIGR01271 1208 AQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVT 1286 (1490)
T ss_pred CCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCC
Confidence 0011233467999999999975 4689999999999999999999999999999999999997 79999999976
Q ss_pred -ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCChhHH
Q 001446 246 -SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQ 321 (1075)
Q Consensus 246 -~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqk 321 (1075)
.++|++|+||||+|.+|+||||+||... ...++++++++|+.+++.+++.++|.+.++ +.|.+||||||
T Consensus 1287 ~~~lR~~is~IpQdp~LF~GTIR~NLdp~-------~~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQr 1359 (1490)
T TIGR01271 1287 LQTWRKAFGVIPQKVFIFSGTFRKNLDPY-------EQWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHK 1359 (1490)
T ss_pred HHHHHhceEEEeCCCccCccCHHHHhCcc-------cCCCHHHHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHH
Confidence 3578899999999999999999999542 134678999999999999999998876443 56789999999
Q ss_pred HHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcCCCcEEEecCCCCc
Q 001446 322 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGEGEWRVHDKRDGS 399 (1075)
Q Consensus 322 qRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~~~~~~~~~~ 399 (1075)
||++|||||+++|+|||||||||+||.+++..|.+.+++ .++|+|+||||++.+..+|+|++|++ |..++.+.+.+
T Consensus 1360 QrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrIlvL~~--G~ivE~g~p~~ 1437 (1490)
T TIGR01271 1360 QLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLECQQFLVIEG--SSVKQYDSIQK 1437 (1490)
T ss_pred HHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEEC--CEEEEeCCHHH
Confidence 999999999999999999999999999999999999986 48999999999999999999999986 33455444433
No 113
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=5.3e-42 Score=414.28 Aligned_cols=348 Identities=15% Similarity=0.169 Sum_probs=239.6
Q ss_pred cHHHHHHHHHHHHHHHHHHhhHHHHHhcCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 13 MSKEQQLEGEYRQLHSRLRTHAESIAFYGGEN--KEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVIL 90 (1075)
Q Consensus 13 ~~~~~~~e~~~r~~l~~i~~~~e~I~~~~~e~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (1075)
..+.++.++++...+.....+.++|+.|+.++ .+.+++.+..++..+...+ ...................++..+
T Consensus 180 ~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 256 (555)
T TIGR01194 180 FHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHII---EILIFIAAENFGQLLFFLLIGCAL 256 (555)
T ss_pred HHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555677677777778899999999854 3444444433333222211 111111111111100111111111
Q ss_pred HHhhhhccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCC
Q 001446 91 IIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRN 170 (1075)
Q Consensus 91 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 170 (1075)
++++.. +..+.|...++ ...+..++..+..+......+.+...+++|+.++++...+...........
T Consensus 257 ----~~~~~~--~~~t~g~l~a~------~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~ 324 (555)
T TIGR01194 257 ----FAAAMF--ASIDAAAISAF------VLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDAD 324 (555)
T ss_pred ----HHHHHh--cCCCHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccc
Confidence 122111 12234432222 122233445666777777888999999999998865321110000000000
Q ss_pred CC--CCCCCCCccEEEEeEEEEcCCC----CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCc
Q 001446 171 GS--RNYFSEANYIEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGV 244 (1075)
Q Consensus 171 ~~--~~~~~~~~~i~~~~v~~~~~~~----~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~ 244 (1075)
.. .......+.++++||+|.|++. +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 325 ~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~ 404 (555)
T TIGR01194 325 NVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGA 404 (555)
T ss_pred cccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCE
Confidence 00 0000113469999999999752 36999999999999999999999999999999999999999999999996
Q ss_pred C------ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCCh
Q 001446 245 G------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSL 318 (1075)
Q Consensus 245 ~------~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSg 318 (1075)
+ .++++.++||+|+|++|++|+++|+. ...+++++.++++.++++++.+++|.+.++. .+|||
T Consensus 405 ~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~~---------~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~--~~LSg 473 (555)
T TIGR01194 405 AVSADSRDDYRDLFSAIFADFHLFDDLIGPDEG---------EHASLDNAQQYLQRLEIADKVKIEDGGFSTT--TALST 473 (555)
T ss_pred ECCCCCHHHHHhhCcEEccChhhhhhhhhcccc---------cchhHHHHHHHHHHcCCchhhcccccccCCc--ccCCH
Confidence 5 24567899999999999999999951 1235667889999999999999988765543 68999
Q ss_pred hHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHH----hcCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 319 GEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVR----AMGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 319 GqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~----~~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
|||||++||||++++|+++|||||||+||+++++.+.+.+. ..++|+|+||||++.+..||+|+++++
T Consensus 474 Gq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~ 545 (555)
T TIGR01194 474 GQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAA 545 (555)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999987542 358999999999999999999999986
No 114
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-43 Score=364.36 Aligned_cols=198 Identities=29% Similarity=0.405 Sum_probs=172.2
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-ccc--cccEEEEc
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-SDL--NKEIFYVP 256 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-~~~--~~~i~~v~ 256 (1075)
..|+++|+++.|.++ ++|+|+||++++|++++|+||||+|||||+|+|+|+++|.+|+|.+.|.+ ... +.+|||||
T Consensus 3 ~~i~v~nl~v~y~~~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgYVP 81 (254)
T COG1121 3 PMIEVENLTVSYGNR-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGYVP 81 (254)
T ss_pred cEEEEeeeEEEECCE-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEEcC
Confidence 368999999999755 79999999999999999999999999999999999999999999999864 112 35799999
Q ss_pred CCC---CCCcCCHHHHhcCCCCCCcc----cCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHH
Q 001446 257 QRP---YTAVGTLRDQLIYPLTSDQE----VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 329 (1075)
Q Consensus 257 Q~~---~~~~~tv~~ni~~~~~~~~~----~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAra 329 (1075)
|.. |-|+.||+|-+..+...... ....+.+++.++|+.+|+.++.++.. .+|||||+|||.||||
T Consensus 82 Q~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i--------~~LSGGQ~QRV~lARA 153 (254)
T COG1121 82 QKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQI--------GELSGGQKQRVLLARA 153 (254)
T ss_pred cccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCcc--------cccCcHHHHHHHHHHH
Confidence 965 56788999999887543221 12234578899999999999998865 6899999999999999
Q ss_pred HcCCCCEEEEeCCCCCCCHHHHHHHHHHHH---hcCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 330 FYHKPKFAILDECTSAVTTDMEERFCAKVR---AMGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 330 l~~~p~illLDEpts~LD~~~~~~i~~~l~---~~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
|+++|++|+|||||+|+|+.++..+++.++ +.|+||++||||++.+ .++|+|+.+++
T Consensus 154 L~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln~ 214 (254)
T COG1121 154 LAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLNR 214 (254)
T ss_pred hccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEcC
Confidence 999999999999999999999999888765 3599999999999987 57999999975
No 115
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.6e-40 Score=410.57 Aligned_cols=446 Identities=18% Similarity=0.271 Sum_probs=278.2
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhccCCceEEEecCCCCCCCCcchhHHHHHHHHHHHHHHhhhhhHhHHHHHHHHHHHHHh
Q 001446 557 HLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDILWFTWRMKAL 636 (1075)
Q Consensus 557 ~~~~~~~~~~r~~l~~~ll~~~l~~~~~~~~~~~~~~~~~~~~r~s~D~~~~~~~l~~~~~~~i~~~~~~~~~~~~l~~~ 636 (1075)
+...+...++|..+...+.+.-++-...-+ .....+++.|-++.|++.+.+....+ ..+...++.++...+.|+..
T Consensus 264 ~~~~~~g~r~R~al~~~IY~K~L~ls~~~~---~~~t~G~ivNlms~D~~ri~~~~~~~-h~~w~~Plqi~~~l~lLy~~ 339 (1381)
T KOG0054|consen 264 FVSFRVGMRLRSALISAIYRKALRLSNSAR---GETTVGEIVNLMSVDAQRLSDAACFL-HLLWSAPLQIILALYLLYGL 339 (1381)
T ss_pred HHHHhhhhhHHHHHHHHHHHhhhcCchhhc---cCCCcchhhhhhhhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 345677778888888877776665322111 23346788999999999998765432 22233333333333333333
Q ss_pred hch---hhHHHHHHHHHHHHHHHHHhccccccccHH-HHhhchhhhhHHHHHHHhhHHhhhcCCcHHHHHHHHHHHHHHH
Q 001446 637 TGQ---RGVAILYAYMLLGLGFLRSVTPEFGDLTSR-EQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELL 712 (1075)
Q Consensus 637 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~i~~~~~~~~e~~~~~~~~~~~~ 712 (1075)
.|+ .+++++++++++.....+... +...+ +...+...+. ..++.++++.|+.|+||+.-.+ ..++..
T Consensus 340 LG~sa~~G~~~~il~~p~n~~~a~~~~----~~q~~~m~~~D~Rik~-~nEiL~~IkviK~yaWE~~F~~----~I~~~R 410 (1381)
T KOG0054|consen 340 LGPSALAGVAVMVLLIPLNSFLAKKIA----KFQKRLMKRKDERIKL-MNEILNGIKVIKLYAWEKPFLK----KIEDLR 410 (1381)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhhhhhHHHHH-HHHHHhhhHhhhhHhhHHHHHH----HHHHHH
Confidence 322 223333333333333222211 11111 1112222222 2345567889999998664333 333333
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhhchhhHHHHHHHHHHHhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001446 713 EHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDILELHRK 792 (1075)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 792 (1075)
+......++..+......++....+..+.+..-..|.. ..+. ..+......++ +.+..+-.++..+-.....
T Consensus 411 ~~El~~lrk~~~~~~~~~~~~~~~p~lv~~~tF~~~v~-~~~~---~lt~~~aF~sl----alfniLr~pl~~~P~~i~~ 482 (1381)
T KOG0054|consen 411 QKELKLLRKSAYLSALNSFLNFFSPVLVSVVTFVVFVL-LLGN---LLTASTAFTSL----ALFNILRFPLFMLPSVISQ 482 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccCc---cccHhHHHHHH----HHHHHHHHHHHHHHHHHHH
Confidence 22222222222211111111111111111111111111 0010 01111111111 1223334455566666677
Q ss_pred HHHHhhhhhhHHHHHHHHhhcCCCCCcccCCccCcCCCCCCCCceEEeeeeeeCCC--ccccccccceeecCCCeEEEEc
Q 001446 793 FVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS--QKLLARQLTFEIVPGKSLLVTG 870 (1075)
Q Consensus 793 ~~~~~~s~~Ri~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~--~~~vL~~vs~~I~~Ge~vaIvG 870 (1075)
..++..|++|+.+++..++..+.... . . +....+-.|+++|.+|+..+ .++.|+||||+|++|+.+||||
T Consensus 483 ~vqa~VS~~Ri~~fl~~~e~~~~~~~-~-----~--~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG 554 (1381)
T KOG0054|consen 483 LVQAKVSLKRLKEFLLSEELDPDSVE-R-----S--PDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVG 554 (1381)
T ss_pred HHHHHHHHHHHHHHhcCcccCccccc-c-----C--CCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEEC
Confidence 78889999999999864332211100 0 0 11112346999999997643 4569999999999999999999
Q ss_pred CCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCc
Q 001446 871 PNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGE 950 (1075)
Q Consensus 871 ~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~ 950 (1075)
++|||||||+++|+|-.+..+|++.++|. ++||||+|.+|+|||||||.++.+.+++.
T Consensus 555 ~vGsGKSSLL~AiLGEm~~~sG~v~v~gs-----------iaYv~Q~pWI~ngTvreNILFG~~~d~~r----------- 612 (1381)
T KOG0054|consen 555 PVGSGKSSLLSAILGEMPKLSGSVAVNGS-----------VAYVPQQPWIQNGTVRENILFGSPYDEER----------- 612 (1381)
T ss_pred CCCCCHHHHHHHHhcCcccccceEEEcCe-----------EEEeccccHhhCCcHHHhhhcCccccHHH-----------
Confidence 99999999999999999999999999985 99999999999999999999876543322
Q ss_pred ccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHH
Q 001446 951 KLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEE 1029 (1075)
Q Consensus 951 ~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~ 1029 (1075)
-.++++.+.|..-++.+|.|=.|.+ ++|-+|||||||||++|||+.++++|.+||.|-||+|+.+-+
T Consensus 613 ------------Y~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~ 680 (1381)
T KOG0054|consen 613 ------------YDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGK 680 (1381)
T ss_pred ------------HHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhH
Confidence 2345556666666777788867765 789999999999999999999999999999999999999988
Q ss_pred HHHHH-HHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 1030 QLYRL-AKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1030 ~i~~~-~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
.|.+. ++. +++|+|.|||.++..+..|.++.|+||+
T Consensus 681 ~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~ 719 (1381)
T KOG0054|consen 681 HIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGK 719 (1381)
T ss_pred HHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCe
Confidence 77653 322 5899999999999999999999998876
No 116
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.4e-43 Score=385.74 Aligned_cols=207 Identities=20% Similarity=0.239 Sum_probs=184.2
Q ss_pred CceEEeeeeeeCCC-ccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcE
Q 001446 835 DSISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGI 911 (1075)
Q Consensus 835 g~I~f~~V~~~yp~-~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i 911 (1075)
|.|+|+||++.|++ .+++|+|+||+|++||+++|+||||||||||+++|+|+++ .+|+|.+||.++..+ ..+|++|
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 57999999999974 5679999999999999999999999999999999999998 799999999999876 3457789
Q ss_pred EEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccc
Q 001446 912 FYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWE 990 (1075)
Q Consensus 912 ~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g 990 (1075)
+||||+|.+|++|+++|++ +... ..+++++++++.++|...+...|+++++.+ ++|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~-~~~~----------------------~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLD-PYGK----------------------WSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred EEECCCcccchhhHHHHhh-hccC----------------------CCHHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 9999999999999999997 3211 124456777888899888888899999976 578
Q ss_pred cCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 991 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 991 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
.+||+|||||+|||||++++|+||||||||++||.++...+++.+++ .++|+|+|+||++++...|++++|.+|.
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~ 213 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENK 213 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCe
Confidence 99999999999999999999999999999999999999999888764 4899999999999988899999997664
No 117
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=6.3e-43 Score=365.33 Aligned_cols=198 Identities=28% Similarity=0.385 Sum_probs=173.9
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 254 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 254 (1075)
.++++|+++.|+ ++++++|+||++++||+++|+||||||||||||+|+|+++|.+|+|.++|++ +++.++++|
T Consensus 2 ~L~~~~ls~~y~-~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia~ 80 (258)
T COG1120 2 MLEVENLSFGYG-GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLAY 80 (258)
T ss_pred eeEEEEEEEEEC-CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEEE
Confidence 488999999996 7899999999999999999999999999999999999999999999999975 356789999
Q ss_pred EcCCCCCCc-CCHHHHhcCCCCCCcc----cCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHH
Q 001446 255 VPQRPYTAV-GTLRDQLIYPLTSDQE----VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 329 (1075)
Q Consensus 255 v~Q~~~~~~-~tv~~ni~~~~~~~~~----~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAra 329 (1075)
|||.+..+. .||+|-+.+|...... ....+.+.+.++|+.+++.++.++.. .+||||||||+.||||
T Consensus 81 vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~--------~~LSGGerQrv~iArA 152 (258)
T COG1120 81 VPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV--------DELSGGERQRVLIARA 152 (258)
T ss_pred eccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc--------cccChhHHHHHHHHHH
Confidence 999986654 5999999988654211 12233446788999999999999865 6899999999999999
Q ss_pred HcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcCC
Q 001446 330 FYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 387 (1075)
Q Consensus 330 l~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~~ 387 (1075)
|+++|++++||||||+||.....++++.+++ .|+|+|+|+||++.. ++||+++.|+++
T Consensus 153 LaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G 215 (258)
T COG1120 153 LAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDG 215 (258)
T ss_pred HhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999999888754 489999999999986 689999999863
No 118
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=7.5e-41 Score=404.43 Aligned_cols=239 Identities=20% Similarity=0.230 Sum_probs=194.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCCCCCCccEEEEeEEEEcCCCCeeeeeceEEEe
Q 001446 127 FQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVE 206 (1075)
Q Consensus 127 ~~~~~~~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~i~l~i~ 206 (1075)
...+..+......+.....+.+|+.++.+.+++... .. ....+..+.++++||+|.|++++++|+|+||+++
T Consensus 276 ~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~--~~------~~~~~~~~~i~~~~v~f~y~~~~~~l~~i~~~i~ 347 (547)
T PRK10522 276 RTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEF--PR------PQAFPDWQTLELRNVTFAYQDNGFSVGPINLTIK 347 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc--cc------ccccCcCceEEEEEEEEEeCCCCeEEecceEEEc
Confidence 345666777777888889999999887543221110 00 0001112469999999999866689999999999
Q ss_pred CCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEEEcCCCCCCcCCHHHHhcCCCCCCccc
Q 001446 207 PGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV 280 (1075)
Q Consensus 207 ~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~ 280 (1075)
+||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..++++++||||+|++|++|+++| +
T Consensus 348 ~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~------- 417 (547)
T PRK10522 348 RGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G------- 417 (547)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---c-------
Confidence 999999999999999999999999999999999999975 246788999999999999999998 1
Q ss_pred CcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh
Q 001446 281 EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA 360 (1075)
Q Consensus 281 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~ 360 (1075)
...+++++.++++.+++.+..+. +.+. ..|.+||||||||++||||++++|+++|||||||+||+++++.+.+.+.+
T Consensus 418 ~~~~~~~~~~~~~~~~l~~~~~~-~~~~--~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~ 494 (547)
T PRK10522 418 KPANPALVEKWLERLKMAHKLEL-EDGR--ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLP 494 (547)
T ss_pred CchHHHHHHHHHHHcCCchhhhc-cccC--CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHH
Confidence 12345677889999998876543 2111 13679999999999999999999999999999999999999998887642
Q ss_pred ----cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 361 ----MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 361 ----~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
.++|+|+|||+++.++.+|+|+++++
T Consensus 495 ~~~~~~~tvi~itH~~~~~~~~d~i~~l~~ 524 (547)
T PRK10522 495 LLQEMGKTIFAISHDDHYFIHADRLLEMRN 524 (547)
T ss_pred HHHhCCCEEEEEEechHHHHhCCEEEEEEC
Confidence 48999999999999999999999986
No 119
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.6e-43 Score=343.60 Aligned_cols=197 Identities=23% Similarity=0.290 Sum_probs=166.0
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCc---cccCCcCcEE
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHID---EEAGSGCGIF 912 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~---~~~~~r~~i~ 912 (1075)
-|+++||+.+|. ...||+|||++|++||.|+|+||||||||||+++|.+|-+|++|+|.+||.++. ++..+|++++
T Consensus 2 mi~i~~l~K~fg-~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~vG 80 (240)
T COG1126 2 MIEIKNLSKSFG-DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKVG 80 (240)
T ss_pred eEEEEeeeEEeC-CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhcC
Confidence 389999999995 457999999999999999999999999999999999999999999999998775 3466788999
Q ss_pred EEcCCCCCCC-cchhhhhcCCC------ChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcc
Q 001446 913 YVPQRPYTCL-GTLRDQIIYPL------SREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 985 (1075)
Q Consensus 913 ~VpQdP~Lf~-gTir~NL~~p~------~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt 985 (1075)
+|+|..-||+ -|+-+|+.++. +.+++ .+...+.|+.|||.+....
T Consensus 81 mVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA---------------------~~~A~~lL~~VGL~~ka~~------- 132 (240)
T COG1126 81 MVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEA---------------------REKALELLEKVGLADKADA------- 132 (240)
T ss_pred eecccccccccchHHHHHHhhhHHHcCCCHHHH---------------------HHHHHHHHHHcCchhhhhh-------
Confidence 9999999997 59999998632 12221 2233467888988665433
Q ss_pred ccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHH---HhcCceEEEecCCCC-chhhccceEEE
Q 001446 986 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLA---KDMGITFVTSSQRPA-LIPFHSLELRL 1061 (1075)
Q Consensus 986 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~---~~~~~TvI~IaHRls-~i~~~~~~l~l 1061 (1075)
+..+||||||||+||||||.-+|+|+++||||||||+|.-..+.+.+ ++.|.|+|+|+|-+. ..+..|+++.+
T Consensus 133 ---yP~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFm 209 (240)
T COG1126 133 ---YPAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFM 209 (240)
T ss_pred ---CccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEe
Confidence 35679999999999999999999999999999999999876665554 346999999999998 45689999999
Q ss_pred EcC
Q 001446 1062 IDG 1064 (1075)
Q Consensus 1062 ~~g 1064 (1075)
++|
T Consensus 210 d~G 212 (240)
T COG1126 210 DQG 212 (240)
T ss_pred eCC
Confidence 766
No 120
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-42 Score=346.70 Aligned_cols=198 Identities=23% Similarity=0.350 Sum_probs=173.9
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC---------cccccc
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG---------SDLNKE 251 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~---------~~~~~~ 251 (1075)
.|+++||++.||+++++|+||||+|++||+++|+||||||||||||+|.|+++|++|+|.++|.+ ..++++
T Consensus 3 ~i~~~nl~k~yp~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~~ 82 (258)
T COG3638 3 MIEVKNLSKTYPGGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRRD 82 (258)
T ss_pred eEEEeeeeeecCCCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHHh
Confidence 68999999999999999999999999999999999999999999999999999999999999954 245789
Q ss_pred EEEEcCCCCCCc-CCHHHHhcCCCCCCc--------ccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHH
Q 001446 252 IFYVPQRPYTAV-GTLRDQLIYPLTSDQ--------EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQ 322 (1075)
Q Consensus 252 i~~v~Q~~~~~~-~tv~~ni~~~~~~~~--------~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkq 322 (1075)
|||++|.+.+.+ .||.+|++.+..... .....+...+.++|+++|+.+..-... .+|||||||
T Consensus 83 iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra--------~~LSGGQQQ 154 (258)
T COG3638 83 IGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA--------STLSGGQQQ 154 (258)
T ss_pred ceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh--------ccCCcchhH
Confidence 999999998765 599999987653321 112334456778999999988766543 689999999
Q ss_pred HHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 323 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 323 Rl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
||+|||||+.+|+++|.|||+++|||.+.+.+++.+++ .|.|+|+.-|+++++ ++||||+-|++
T Consensus 155 RVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~ 223 (258)
T COG3638 155 RVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKA 223 (258)
T ss_pred HHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecC
Confidence 99999999999999999999999999999999998864 589999999999997 58999999986
No 121
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.7e-43 Score=362.21 Aligned_cols=203 Identities=23% Similarity=0.284 Sum_probs=171.3
Q ss_pred eEEeeeeeeCCC----ccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc-----cCC
Q 001446 837 ISFSKLDIITPS----QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-----AGS 907 (1075)
Q Consensus 837 I~f~~V~~~yp~----~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~-----~~~ 907 (1075)
|+|++|+..|+. ..++|+||||+|++||..||+|+||+|||||++++-+|-.|++|+|.+||.|+..+ ..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 789999998876 25699999999999999999999999999999999999999999999999999887 245
Q ss_pred cCcEEEEcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccc
Q 001446 908 GCGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 986 (1075)
Q Consensus 908 r~~i~~VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~ 986 (1075)
|++|++|+|++-|++ -|+.+|+.||..- ++.. .......+.+.|+-|||.+...+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLei----------ag~~------k~ei~~RV~elLelVgL~dk~~~-------- 137 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLEL----------AGVP------KAEIKQRVAELLELVGLSDKADR-------- 137 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhh----------cCCC------HHHHHHHHHHHHHHcCChhhhcc--------
Confidence 788999999999998 7999999998631 0100 00113456677888888544332
Q ss_pred cccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHH----hcCceEEEecCCCCch-hhccceEEE
Q 001446 987 LNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAK----DMGITFVTSSQRPALI-PFHSLELRL 1061 (1075)
Q Consensus 987 ~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~----~~~~TvI~IaHRls~i-~~~~~~l~l 1061 (1075)
..++||||||||++|||||..+|+||+.||||||||++|-+.|.++++ +.|.|+++|+|-++.+ +++|++.+|
T Consensus 138 --yP~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm 215 (339)
T COG1135 138 --YPAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVL 215 (339)
T ss_pred --CchhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEe
Confidence 357899999999999999999999999999999999999887776664 3699999999999955 599999999
Q ss_pred EcCC
Q 001446 1062 IDGE 1065 (1075)
Q Consensus 1062 ~~g~ 1065 (1075)
++|.
T Consensus 216 ~~G~ 219 (339)
T COG1135 216 DQGR 219 (339)
T ss_pred eCCE
Confidence 8775
No 122
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.7e-42 Score=374.69 Aligned_cols=197 Identities=26% Similarity=0.382 Sum_probs=176.0
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC----ccccccEEEEc
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFYVP 256 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~----~~~~~~i~~v~ 256 (1075)
.|+++||++.|.+.. +++++||+|++||+++|+||||||||||||+|+|+.+|++|+|.++|.+ ....++|++||
T Consensus 3 ~i~l~~v~K~yg~~~-~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iamVF 81 (338)
T COG3839 3 ELELKNVRKSFGSFE-VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAMVF 81 (338)
T ss_pred EEEEeeeEEEcCCce-eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEEEe
Confidence 589999999996433 9999999999999999999999999999999999999999999999975 22357899999
Q ss_pred CCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCC
Q 001446 257 QRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 335 (1075)
Q Consensus 257 Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~ 335 (1075)
|+.-+++ .||+|||.||+......+...+.++.++++.++|++++++.| .+|||||||||||||||+++|+
T Consensus 82 Q~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P--------~~LSGGQrQRVAlaRAlVr~P~ 153 (338)
T COG3839 82 QNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP--------LQLSGGQRQRVALARALVRKPK 153 (338)
T ss_pred CCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc--------ccCChhhHHHHHHHHHHhcCCC
Confidence 9997765 699999999988765555566788999999999999999999 6999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHH----hcCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 336 FAILDECTSAVTTDMEERFCAKVR----AMGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 336 illLDEpts~LD~~~~~~i~~~l~----~~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
++|||||+|+||.+.+..+...++ +.+.|+|+||||...+ ..+|+|.+|++
T Consensus 154 v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~ 209 (338)
T COG3839 154 VFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMND 209 (338)
T ss_pred EEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeC
Confidence 999999999999998887766654 3589999999998765 57999999984
No 123
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.5e-43 Score=340.99 Aligned_cols=201 Identities=22% Similarity=0.251 Sum_probs=170.5
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCc-----cEEEeCCcC--------c
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVS-----GHIAKPGVG--------S 246 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~-----G~i~~~~~~--------~ 246 (1075)
..++++|++++|. ++.+|+|||++|++++++|++||||||||||||++.++.+... |+|.++|++ .
T Consensus 6 ~~~~~~~l~~yYg-~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~ 84 (253)
T COG1117 6 PAIEVRDLNLYYG-DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVV 84 (253)
T ss_pred ceeEecceeEEEC-chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHH
Confidence 4689999999995 6789999999999999999999999999999999999988775 999999975 2
Q ss_pred cccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHh-cCCCCcccCCCCCCChhHHHHHH
Q 001446 247 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLD-RYPPEKEINWGDELSLGEQQRLG 325 (1075)
Q Consensus 247 ~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~~~~~~g~~LSgGqkqRl~ 325 (1075)
.+|++||+|||.|.-|+.||+||+.||....+.....-++.+++.|+.+.|++..+ ++. ..+..||||||||++
T Consensus 85 ~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDrL~-----~sa~~LSGGQQQRLc 159 (253)
T COG1117 85 ELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDRLH-----KSALGLSGGQQQRLC 159 (253)
T ss_pred HHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHHhh-----CCccCCChhHHHHHH
Confidence 47899999999999999999999999976554433344566788899999876543 321 123679999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 326 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 326 lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|||||.-+|++||||||||||||.+..+|-+.+.+ .+.|||+|||++.... ..|+...+-.
T Consensus 160 IARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~ 223 (253)
T COG1117 160 IARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYL 223 (253)
T ss_pred HHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcc
Confidence 99999999999999999999999999888777654 4789999999998764 5788877764
No 124
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-43 Score=343.18 Aligned_cols=204 Identities=23% Similarity=0.274 Sum_probs=167.3
Q ss_pred CceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCC-----CeEecCCCCCccc----c
Q 001446 835 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVS-----GSLTKPSQHIDEE----A 905 (1075)
Q Consensus 835 g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~s-----G~I~idg~di~~~----~ 905 (1075)
..++++|++++|. ...+|+|||+.|++++.+|++|||||||||+++.|-|+.|... |+|.+||.||.+. .
T Consensus 6 ~~~~~~~l~~yYg-~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~ 84 (253)
T COG1117 6 PAIEVRDLNLYYG-DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVV 84 (253)
T ss_pred ceeEecceeEEEC-chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHH
Confidence 4689999999996 5679999999999999999999999999999999999999876 9999999999864 3
Q ss_pred CCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcc
Q 001446 906 GSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 985 (1075)
Q Consensus 906 ~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt 985 (1075)
.+|.++++|.|.|--|+.||+||+.|+.. .++..+ ...|+.+...|+++.||+.+.. .|+.
T Consensus 85 ~lRr~vGMVFQkPnPFp~SIydNVayG~r----------~~g~~~------~~ldeiVe~sLk~AaLWdEVKD---rL~~ 145 (253)
T COG1117 85 ELRRRVGMVFQKPNPFPMSIYDNVAYGLR----------LHGIKD------KELDEIVESSLKKAALWDEVKD---RLHK 145 (253)
T ss_pred HHHHHheeeccCCCCCCchHHHHHHHhHH----------hhccch------HHHHHHHHHHHHHhHhHHHhHH---HhhC
Confidence 57889999999999999999999999642 111111 1246667788899999987742 2332
Q ss_pred ccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCC-chhhccceEEE
Q 001446 986 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPA-LIPFHSLELRL 1061 (1075)
Q Consensus 986 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls-~i~~~~~~l~l 1061 (1075)
. +..|||||||||||||||.-+|+||+|||||||||+-+-..|.+++.+ .+-|+|+|+|.+. ..+..|+.-.+
T Consensus 146 s---a~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf 221 (253)
T COG1117 146 S---ALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFF 221 (253)
T ss_pred C---ccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhh
Confidence 2 345999999999999999999999999999999999887777776654 5889999999984 44544444443
No 125
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-42 Score=345.63 Aligned_cols=197 Identities=34% Similarity=0.467 Sum_probs=171.2
Q ss_pred cEEEEeEEEEcCCCC---eeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-------ccccc
Q 001446 181 YIEFSGVKVVTPTGN---VLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-------SDLNK 250 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~---~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-------~~~~~ 250 (1075)
.++++|+++.|+.++ ++|++|||++.+||+++|+|+||||||||.++|+|+.+|++|+|.++|.. ...++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 589999999997654 59999999999999999999999999999999999999999999999954 13467
Q ss_pred cEEEEcCCCCC---CcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCCh-hHHhcCCCCcccCCCCCCChhHHHHHHH
Q 001446 251 EIFYVPQRPYT---AVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQRLGM 326 (1075)
Q Consensus 251 ~i~~v~Q~~~~---~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGqkqRl~l 326 (1075)
.|-+|||+|+- +..||++-|.-|...... .....++.++++.+||. .+++++| .+|||||+|||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~--~~~~~~i~~~L~~VgL~~~~l~R~P--------~eLSGGQ~QRiaI 152 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGL--SKSQQRIAELLDQVGLPPSFLDRRP--------HELSGGQRQRIAI 152 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCc--cHHHHHHHHHHHHcCCCHHHHhcCc--------hhcChhHHHHHHH
Confidence 89999999973 456999988877654221 12344588999999996 4788888 6899999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcCC
Q 001446 327 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGE 387 (1075)
Q Consensus 327 Aral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~~ 387 (1075)
||||..+|++||||||||+||......+++.+.+ .+.|+|+||||+..+. .||||++|+++
T Consensus 153 ARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G 218 (252)
T COG1124 153 ARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNG 218 (252)
T ss_pred HHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCC
Confidence 9999999999999999999999999999887743 5889999999999986 59999999973
No 126
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-42 Score=376.21 Aligned_cols=199 Identities=25% Similarity=0.382 Sum_probs=176.0
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC----ccccccEEEE
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFYV 255 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~----~~~~~~i~~v 255 (1075)
..++++||++.|. +..+++|+||+|++||+++++||||||||||||+|+|+..|++|+|.++|++ ...++.|++|
T Consensus 4 ~~l~i~~v~k~yg-~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig~V 82 (352)
T COG3842 4 PALEIRNVSKSFG-DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIGMV 82 (352)
T ss_pred ceEEEEeeeeecC-CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhccccee
Confidence 4689999999996 6789999999999999999999999999999999999999999999999975 2336789999
Q ss_pred cCCCCCCc-CCHHHHhcCCCCCCcccC-cCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCC
Q 001446 256 PQRPYTAV-GTLRDQLIYPLTSDQEVE-PLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHK 333 (1075)
Q Consensus 256 ~Q~~~~~~-~tv~~ni~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~ 333 (1075)
||+.-+|+ .||+|||.||+....... ....+++.++++.++|.++.++.| .+|||||||||||||||..+
T Consensus 83 FQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p--------~qLSGGQqQRVALARAL~~~ 154 (352)
T COG3842 83 FQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKP--------HQLSGGQQQRVALARALVPE 154 (352)
T ss_pred ecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhCh--------hhhChHHHHHHHHHHHhhcC
Confidence 99998876 699999999988332211 224468899999999999999998 79999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHH----hcCCeEEEEecChhh-HhhCCeEEEEcCC
Q 001446 334 PKFAILDECTSAVTTDMEERFCAKVR----AMGTSCITISHRPAL-VAFHDVVLSLDGE 387 (1075)
Q Consensus 334 p~illLDEpts~LD~~~~~~i~~~l~----~~~~t~i~vtH~~~~-~~~~d~i~~l~~~ 387 (1075)
|++||||||+|+||.+.+.++...++ +.|+|.|+||||.+. +..+|+|.+|+++
T Consensus 155 P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G 213 (352)
T COG3842 155 PKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDG 213 (352)
T ss_pred cchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCC
Confidence 99999999999999999988877664 459999999999876 4789999999863
No 127
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1e-41 Score=341.48 Aligned_cols=198 Identities=28% Similarity=0.368 Sum_probs=171.1
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC---------ccccc
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG---------SDLNK 250 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~---------~~~~~ 250 (1075)
..|++++|++.+ +++.+++|+||+|++||+++|+||||||||||+|+|.|+++|++|+|.++|.+ ..+++
T Consensus 7 ~~I~vr~v~~~f-G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir~ 85 (263)
T COG1127 7 PLIEVRGVTKSF-GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIRK 85 (263)
T ss_pred ceEEEeeeeeec-CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHHh
Confidence 469999999998 46789999999999999999999999999999999999999999999999975 24578
Q ss_pred cEEEEcCCCCCCcC-CHHHHhcCCCCCCccc-CcCCHHHHHHHHHHcCChhH-HhcCCCCcccCCCCCCChhHHHHHHHH
Q 001446 251 EIFYVPQRPYTAVG-TLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYL-LDRYPPEKEINWGDELSLGEQQRLGMA 327 (1075)
Q Consensus 251 ~i~~v~Q~~~~~~~-tv~~ni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~~g~~LSgGqkqRl~lA 327 (1075)
++|++||.--+|.. ||+||+.||....... +..-++.+..-|+.+||... .+.+| .+||||+++|+|||
T Consensus 86 r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P--------sELSGGM~KRvaLA 157 (263)
T COG1127 86 RMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP--------SELSGGMRKRVALA 157 (263)
T ss_pred heeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc--------hhhcchHHHHHHHH
Confidence 99999999999986 9999999987543221 11223334556888999887 88888 79999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 328 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 328 ral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
||++.+|+++++||||+||||.+...+-+++++ .|.|+|+||||++.+. .||+++++.+
T Consensus 158 RAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~ 221 (263)
T COG1127 158 RAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLAD 221 (263)
T ss_pred HHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeC
Confidence 999999999999999999999988876665543 4999999999998774 6899999976
No 128
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-41 Score=356.63 Aligned_cols=199 Identities=30% Similarity=0.439 Sum_probs=178.9
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-------ccccccEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-------SDLNKEIF 253 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-------~~~~~~i~ 253 (1075)
.++++|+++.|+++.++|+++||+|++||.++|+|+||||||||+++++|+++|++|.|.++|.+ ..+++++|
T Consensus 3 ~i~~~~l~~~y~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~vG 82 (235)
T COG1122 3 MIEAENLSFRYPGRKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKVG 82 (235)
T ss_pred eEEEEEEEEEcCCCceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcceE
Confidence 58899999999876789999999999999999999999999999999999999999999999964 24678999
Q ss_pred EEcCCC--CCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHc
Q 001446 254 YVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 254 ~v~Q~~--~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~ 331 (1075)
||+|+| .++..||.+.+.|+...........++++.++++.+++.++.++.| .+||||||||||||.+|+
T Consensus 83 ~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p--------~~LSGGqkqRvaIA~vLa 154 (235)
T COG1122 83 LVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP--------FNLSGGQKQRVAIAGVLA 154 (235)
T ss_pred EEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc--------cccCCcceeeHHhhHHHH
Confidence 999999 4677899999999977655443345677889999999999999888 699999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHh---c-CCeEEEEecChhhHh-hCCeEEEEcCC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALVA-FHDVVLSLDGE 387 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l~~---~-~~t~i~vtH~~~~~~-~~d~i~~l~~~ 387 (1075)
.+|+++|||||||+||+...+.+++.+++ . |+|+|++|||++.+. +||++++|+++
T Consensus 155 ~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G 215 (235)
T COG1122 155 MGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDG 215 (235)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECC
Confidence 99999999999999999999999888764 3 689999999999886 59999999863
No 129
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-41 Score=351.08 Aligned_cols=198 Identities=28% Similarity=0.409 Sum_probs=173.7
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCc---Cc----cccccEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGV---GS----DLNKEIF 253 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~---~~----~~~~~i~ 253 (1075)
+|+++|+++.++ ..++++|+|++|+.||.+++.||||||||||||+|+|+..|++|.|.++|. |. ...++||
T Consensus 2 ~i~i~~~~~~~~-~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~VG 80 (345)
T COG1118 2 SIRINNVKKRFG-AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRKVG 80 (345)
T ss_pred ceeehhhhhhcc-cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhccee
Confidence 467888888775 567899999999999999999999999999999999999999999999997 41 2246899
Q ss_pred EEcCCCCCCc-CCHHHHhcCCCCCCccc--CcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHH
Q 001446 254 YVPQRPYTAV-GTLRDQLIYPLTSDQEV--EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 330 (1075)
Q Consensus 254 ~v~Q~~~~~~-~tv~~ni~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral 330 (1075)
||+|+.-+|. .||.+||.||....... +...+.++.+.|+.+.|+.+.+++| .+|||||||||||||||
T Consensus 81 fvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP--------~QLSGGQrQRVALARAL 152 (345)
T COG1118 81 FVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP--------AQLSGGQRQRVALARAL 152 (345)
T ss_pred EEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc--------hhcChHHHHHHHHHHHh
Confidence 9999988765 69999999998644221 2345677889999999999999999 69999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcCC
Q 001446 331 YHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 387 (1075)
Q Consensus 331 ~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~~ 387 (1075)
...|++||||||+++||.+.+..+.++|++ .|.|+++||||.+.+ +.+|+|++|+++
T Consensus 153 A~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G 214 (345)
T COG1118 153 AVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQG 214 (345)
T ss_pred hcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCC
Confidence 999999999999999999999988887764 499999999999876 689999999874
No 130
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1e-41 Score=327.69 Aligned_cols=202 Identities=24% Similarity=0.320 Sum_probs=173.3
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc-----cCCcCcE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-----AGSGCGI 911 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~-----~~~r~~i 911 (1075)
|+|+||+..||+++++|+||||+|++||.+-++|||||||||++++|++.-.|++|+|.++|.|++.+ +.+|++|
T Consensus 2 I~f~~V~k~Y~~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~I 81 (223)
T COG2884 2 IRFENVSKAYPGGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQI 81 (223)
T ss_pred eeehhhhhhcCCCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhee
Confidence 78999999999998899999999999999999999999999999999999999999999999999876 4579999
Q ss_pred EEEcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccc
Q 001446 912 FYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 990 (1075)
Q Consensus 912 ~~VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 990 (1075)
++|.||--|.. -|+.||+.||..-- + ..+......+.++|+.|||.+-...+|
T Consensus 82 GvVFQD~rLL~~~tvyeNVA~pL~v~----------G------~~~~~i~~rV~~~L~~VgL~~k~~~lP---------- 135 (223)
T COG2884 82 GVVFQDFRLLPDRTVYENVALPLRVI----------G------KPPREIRRRVSEVLDLVGLKHKARALP---------- 135 (223)
T ss_pred eeEeeeccccccchHhhhhhhhhhcc----------C------CCHHHHHHHHHHHHHHhccchhhhcCc----------
Confidence 99999998764 69999999986310 0 001112455678899999977666554
Q ss_pred cCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCchh-hccceEEEEcC
Q 001446 991 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIP-FHSLELRLIDG 1064 (1075)
Q Consensus 991 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i~-~~~~~l~l~~g 1064 (1075)
.+||||||||+|||||++.+|++||-||||.+||+++-..|.+++.+ .|.||++.+|.+++++ +..+++.+++|
T Consensus 136 ~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~G 213 (223)
T COG2884 136 SQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDG 213 (223)
T ss_pred cccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCC
Confidence 56999999999999999999999999999999999998888777654 6999999999998775 55678888766
No 131
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-41 Score=376.93 Aligned_cols=210 Identities=20% Similarity=0.220 Sum_probs=171.2
Q ss_pred cCCCCCCCCceEEeeeeeeCCC-ccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCC-----CCCCeEecCCCC
Q 001446 827 KWNSTDYQDSISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP-----VVSGSLTKPSQH 900 (1075)
Q Consensus 827 ~w~~~~~~g~I~f~~V~~~yp~-~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~-----~~sG~I~idg~d 900 (1075)
.||. .+.|+|+||++.|++ .+++|+|+||+|++||++|||||||||||||+++|+|+++ |.+|+|.+||+|
T Consensus 74 ~~~~---~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~ 150 (329)
T PRK14257 74 DFNH---ANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTN 150 (329)
T ss_pred CCCc---CceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEE
Confidence 5776 578999999999974 4679999999999999999999999999999999999997 469999999999
Q ss_pred Cccc----cCCcCcEEEEcCCCCCCCcchhhhhcCCCC---h-HHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCc
Q 001446 901 IDEE----AGSGCGIFYVPQRPYTCLGTLRDQIIYPLS---R-EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRL 972 (1075)
Q Consensus 901 i~~~----~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~---~-~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L 972 (1075)
++.. ..+|.+++||||+|.+|++|+++||+|+.. . +++.+ ++.+.++++.++|
T Consensus 151 i~~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~-------------------~~~~~~~l~~~~L 211 (329)
T PRK14257 151 TRSKKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKIL-------------------EKIVEKSLKSAAL 211 (329)
T ss_pred ccccccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHH-------------------HHHHHHHHHHcCC
Confidence 9732 245778999999999999999999986311 1 11111 1223445566665
Q ss_pred hhhhhhhccCCcccc-ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCC
Q 001446 973 SYLLEREEVGWDANL-NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRP 1049 (1075)
Q Consensus 973 ~~~i~~~~~Gldt~~-~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRl 1049 (1075)
++ ++++.. ..+.+||||||||+|||||++++|+|||||||||+||.++...+++.++. .++|+|+|||++
T Consensus 212 ~~-------~l~~~~~~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l 284 (329)
T PRK14257 212 WD-------EVKDDLDKAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSM 284 (329)
T ss_pred cc-------hhhhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCH
Confidence 32 222222 45678999999999999999999999999999999999999888887754 479999999999
Q ss_pred Cchh-hccceEEEEcCC
Q 001446 1050 ALIP-FHSLELRLIDGE 1065 (1075)
Q Consensus 1050 s~i~-~~~~~l~l~~g~ 1065 (1075)
.++. ++|++++|.+|.
T Consensus 285 ~~i~~~~Driivl~~G~ 301 (329)
T PRK14257 285 AQAQRISDETVFFYQGW 301 (329)
T ss_pred HHHHHhCCEEEEEECCE
Confidence 9764 699999997664
No 132
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.9e-40 Score=360.53 Aligned_cols=190 Identities=21% Similarity=0.237 Sum_probs=150.8
Q ss_pred CceEEeeeeeeCCCcc-ccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEE
Q 001446 835 DSISFSKLDIITPSQK-LLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFY 913 (1075)
Q Consensus 835 g~I~f~~V~~~yp~~~-~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~ 913 (1075)
..+.|.+|+|.|+.++ +.++++++.++.-+++++||++|+||||+++++.+=..|..|.+.+.+ |.+|++
T Consensus 361 p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~---------r~ri~~ 431 (582)
T KOG0062|consen 361 PNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP---------RLRIKY 431 (582)
T ss_pred CeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc---------cceecc
Confidence 4689999999776544 899999999999999999999999999999999998888999887655 467998
Q ss_pred EcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCC
Q 001446 914 VPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDIL 993 (1075)
Q Consensus 914 VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~L 993 (1075)
-.|.-+=| +.-|. ...+... ...|...++++...+..+||..-+... .-..|
T Consensus 432 f~Qhhvd~---l~~~v--------~~vd~~~--------~~~pG~~~ee~r~hl~~~Gl~g~la~~---------si~~L 483 (582)
T KOG0062|consen 432 FAQHHVDF---LDKNV--------NAVDFME--------KSFPGKTEEEIRRHLGSFGLSGELALQ---------SIASL 483 (582)
T ss_pred hhHhhhhH---HHHHh--------HHHHHHH--------HhCCCCCHHHHHHHHHhcCCCchhhhc---------ccccc
Confidence 88865432 11111 1111111 123455788889888888774322211 12469
Q ss_pred ChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHhcCceEEEecCCCCchhhccceEEE
Q 001446 994 SLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRL 1061 (1075)
Q Consensus 994 SgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~~~~TvI~IaHRls~i~~~~~~l~l 1061 (1075)
|||||-|++||-....+|.+|||||||..||.++-.++-+.++..+--||+|+|..+.++-...++..
T Consensus 484 SGGQKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F~GGVv~VSHd~~fi~~~c~E~Wv 551 (582)
T KOG0062|consen 484 SGGQKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNFNGGVVLVSHDEEFISSLCKELWV 551 (582)
T ss_pred CCcchhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhcCCcEEEEECcHHHHhhcCceeEE
Confidence 99999999999999999999999999999999999999998887778999999999999887777777
No 133
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.4e-40 Score=316.62 Aligned_cols=195 Identities=25% Similarity=0.348 Sum_probs=170.6
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC----ccccccEEEEcC
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFYVPQ 257 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~----~~~~~~i~~v~Q 257 (1075)
+.+++|.+.|.. .=-.++++|++||+++|+|||||||||||++|+|+..|.+|+|.++|++ ....+-++++||
T Consensus 2 l~L~~V~~~y~~---~~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSmlFQ 78 (231)
T COG3840 2 LALDDVRFSYGH---LPMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSMLFQ 78 (231)
T ss_pred ccccceEEeeCc---ceEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhhhh
Confidence 567889988853 2235789999999999999999999999999999999999999999986 234567999999
Q ss_pred CCCCCcC-CHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCE
Q 001446 258 RPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 336 (1075)
Q Consensus 258 ~~~~~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~i 336 (1075)
+..+|.- ||.+|+.+|....-.......+++..++.++||..+.+++| .+||||||||+||||+|+++.+|
T Consensus 79 EnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP--------~~LSGGqRQRvALARclvR~~Pi 150 (231)
T COG3840 79 ENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLP--------GELSGGQRQRVALARCLVREQPI 150 (231)
T ss_pred ccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCc--------cccCchHHHHHHHHHHHhccCCe
Confidence 9999975 99999999876554444556778899999999999999999 69999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHH----HhcCCeEEEEecChhhHh-hCCeEEEEcCC
Q 001446 337 AILDECTSAVTTDMEERFCAKV----RAMGTSCITISHRPALVA-FHDVVLSLDGE 387 (1075)
Q Consensus 337 llLDEpts~LD~~~~~~i~~~l----~~~~~t~i~vtH~~~~~~-~~d~i~~l~~~ 387 (1075)
++||||+|+|||..+.++...+ .+.+.|+++|||+++.+. .+|++++++++
T Consensus 151 lLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~G 206 (231)
T COG3840 151 LLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNG 206 (231)
T ss_pred EEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCC
Confidence 9999999999999998877654 456899999999998875 69999999863
No 134
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=8.4e-41 Score=342.46 Aligned_cols=204 Identities=25% Similarity=0.311 Sum_probs=165.6
Q ss_pred eEEeeeeeeCCCc---cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc------CC
Q 001446 837 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA------GS 907 (1075)
Q Consensus 837 I~f~~V~~~yp~~---~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~------~~ 907 (1075)
++++||+..|..+ ..+|+++||+|++||.|+|+||||||||||+++|.++-.|++|.|.++|.|+..++ .+
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 5789999977643 47999999999999999999999999999999999999999999999999998762 24
Q ss_pred cCcEEEEcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccc
Q 001446 908 GCGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 986 (1075)
Q Consensus 908 r~~i~~VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~ 986 (1075)
|.+|+||+|+..|.+ -|++||+..|.... +.. .......+.+.++.+||.+....
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~----------~~~------~~~~~~~~~~l~~~lgl~~~~~~-------- 137 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIA----------GKS------AGRRKRAAEELLEVLGLEDRLLK-------- 137 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHc----------CCC------hhHHHHHHHHHHHhcCChhhhcc--------
Confidence 567999999999876 59999998653100 000 00012334456677777543320
Q ss_pred cccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHH----hcCceEEEecCCCCchhhccceEEEE
Q 001446 987 LNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAK----DMGITFVTSSQRPALIPFHSLELRLI 1062 (1075)
Q Consensus 987 ~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~----~~~~TvI~IaHRls~i~~~~~~l~l~ 1062 (1075)
....+||||||||+||||||+.+|+|++.||||++||.++.+.+.++++ +.|+|+|+|+|......+.|+++.+.
T Consensus 138 -~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~ 216 (226)
T COG1136 138 -KKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELK 216 (226)
T ss_pred -CCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEe
Confidence 1135799999999999999999999999999999999999988777654 35899999999999999999999998
Q ss_pred cCC
Q 001446 1063 DGE 1065 (1075)
Q Consensus 1063 ~g~ 1065 (1075)
||.
T Consensus 217 dG~ 219 (226)
T COG1136 217 DGK 219 (226)
T ss_pred CCe
Confidence 886
No 135
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.4e-40 Score=370.07 Aligned_cols=198 Identities=26% Similarity=0.340 Sum_probs=171.4
Q ss_pred cEEEEeEEEEcCC---CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc---------cc
Q 001446 181 YIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DL 248 (1075)
Q Consensus 181 ~i~~~~v~~~~~~---~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~ 248 (1075)
+|+++|+++.|++ ..++|+|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|.+. ..
T Consensus 1 mI~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~ 80 (343)
T TIGR02314 1 MIKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKA 80 (343)
T ss_pred CEEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 3789999999963 24799999999999999999999999999999999999999999999999641 13
Q ss_pred cccEEEEcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHH
Q 001446 249 NKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 327 (1075)
Q Consensus 249 ~~~i~~v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lA 327 (1075)
+++|+|+||++.++. .|++||+.++............+++.++++.++|.+..+++| .+|||||||||+||
T Consensus 81 r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~--------~~LSgGqkQRV~IA 152 (343)
T TIGR02314 81 RRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYP--------SNLSGGQKQRVAIA 152 (343)
T ss_pred hcCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh--------hhCCHHHHHHHHHH
Confidence 568999999998875 699999998753221111123456788999999999888887 68999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 328 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 328 ral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|||+.+|++||||||||+||+.+...+++.+++ .|.|+|+|||+++.+. .||++++|++
T Consensus 153 RAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~ 216 (343)
T TIGR02314 153 RALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISN 216 (343)
T ss_pred HHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999887764 3899999999999984 6999999986
No 136
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=5.3e-40 Score=349.39 Aligned_cols=197 Identities=26% Similarity=0.370 Sum_probs=168.7
Q ss_pred EEEEeEEEEcCCC-CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc---------ccccc
Q 001446 182 IEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNKE 251 (1075)
Q Consensus 182 i~~~~v~~~~~~~-~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~~~~ 251 (1075)
++++|+++.|+++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 7899999999654 4799999999999999999999999999999999999999999999998641 13467
Q ss_pred EEEEcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHH
Q 001446 252 IFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 330 (1075)
Q Consensus 252 i~~v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral 330 (1075)
++|+||+|.++. .|++||+.++............+++.++++.+++.+..++.+ .+||||||||++|||||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~laral 153 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP--------MQLSGGEQQRVAIARAI 153 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh--------hhCCHHHHHHHHHHHHH
Confidence 999999998776 599999987532211111112456788999999998888776 68999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 331 YHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 331 ~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
+.+|+++||||||++||+.+++.+.+.+++ .|+|+|+||||++.+. .||++++|++
T Consensus 154 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~ 213 (216)
T TIGR00960 154 VHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSR 213 (216)
T ss_pred hcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 999999999999999999999999888764 3889999999999885 6999999975
No 137
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=368.26 Aligned_cols=198 Identities=25% Similarity=0.390 Sum_probs=171.8
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC----ccccccEEEEc
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFYVP 256 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~----~~~~~~i~~v~ 256 (1075)
.++++|+++.|++++++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.+ ...+++|+|||
T Consensus 3 ~l~i~~l~~~~~~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v~ 82 (356)
T PRK11650 3 GLKLQAVRKSYDGKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAMVF 82 (356)
T ss_pred EEEEEeEEEEeCCCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 48999999999545789999999999999999999999999999999999999999999999964 12246899999
Q ss_pred CCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCC
Q 001446 257 QRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 335 (1075)
Q Consensus 257 Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~ 335 (1075)
|++.+|+ .||+||+.|+............+++.++++.++|+++.++.| .+|||||||||+|||||+.+|+
T Consensus 83 Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~--------~~LSgGq~QRvalARAL~~~P~ 154 (356)
T PRK11650 83 QNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP--------RELSGGQRQRVAMGRAIVREPA 154 (356)
T ss_pred CCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 9999886 599999999764321111122356788999999999999988 6899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 336 FAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 336 illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
+||||||||+||+.++..+.+.+++ .|+|+|+||||.+.+ ..||+|++|++
T Consensus 155 llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~ 210 (356)
T PRK11650 155 VFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNG 210 (356)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 9999999999999999988887653 389999999999876 57999999985
No 138
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.3e-39 Score=306.56 Aligned_cols=198 Identities=29% Similarity=0.381 Sum_probs=173.4
Q ss_pred cEEEEeEEEEcCC---CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----c----c-
Q 001446 181 YIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----S----D- 247 (1075)
Q Consensus 181 ~i~~~~v~~~~~~---~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~----~- 247 (1075)
.|+++++++.-++ ...+|++++|.|++||.++|+||||||||||+-+++|+-.|++|+|.+.|++ . .
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 5788888876543 3479999999999999999999999999999999999999999999999864 1 1
Q ss_pred ccccEEEEcCCCC-CCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHH
Q 001446 248 LNKEIFYVPQRPY-TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 326 (1075)
Q Consensus 248 ~~~~i~~v~Q~~~-~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~l 326 (1075)
..+++|||||... +++.|-.||+..|.....+..........+.|+.+||.+.+..+| .+|||||||||||
T Consensus 86 R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~~~~~~~~A~~lL~~vGLg~Rl~HyP--------~qLSGGEQQRVAi 157 (228)
T COG4181 86 RARHVGFVFQSFHLIPNLTALENVALPLELRGESSADSRAGAKALLEAVGLGKRLTHYP--------AQLSGGEQQRVAL 157 (228)
T ss_pred hccceeEEEEeeeccccchhhhhccchhhhcCCccccHHHHHHHHHHHhCcccccccCc--------cccCchHHHHHHH
Confidence 2468999999986 467899999999987655433334556788999999999999999 7999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHH----hcCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 327 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVR----AMGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 327 Aral~~~p~illLDEpts~LD~~~~~~i~~~l~----~~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
|||+...|++|+.||||-+||.++.+++.+.+. +.|.|.|+||||+.+...|+|++.|..
T Consensus 158 ARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~Rc~R~~r~~~ 221 (228)
T COG4181 158 ARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAARCDRQLRLRS 221 (228)
T ss_pred HHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHHhhhheeeeec
Confidence 999999999999999999999999999888763 469999999999999999999999975
No 139
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-39 Score=336.96 Aligned_cols=205 Identities=21% Similarity=0.315 Sum_probs=168.1
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEc
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 915 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~Vp 915 (1075)
.|+++|++++|.+. +||+||||+|++|+.++|+||+|||||||+++++|+..|.+|+|.+.|.+++.... +.+|+|||
T Consensus 4 ~i~v~nl~v~y~~~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~-~~~IgYVP 81 (254)
T COG1121 4 MIEVENLTVSYGNR-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK-RLRIGYVP 81 (254)
T ss_pred EEEEeeeEEEECCE-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc-CCeEEEcC
Confidence 58999999999866 69999999999999999999999999999999999999999999999998776532 45799999
Q ss_pred CCC---CCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccC
Q 001446 916 QRP---YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 992 (1075)
Q Consensus 916 QdP---~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~ 992 (1075)
|.. .-|+-|++|-+..+.... ............+.+.++|+.||++++..+. -..
T Consensus 82 Q~~~~d~~fP~tV~d~V~~g~~~~------------~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~----------i~~ 139 (254)
T COG1121 82 QKSSVDRSFPITVKDVVLLGRYGK------------KGWFRRLNKKDKEKVDEALERVGMEDLRDRQ----------IGE 139 (254)
T ss_pred cccccCCCCCcCHHHHHHccCccc------------ccccccccHHHHHHHHHHHHHcCchhhhCCc----------ccc
Confidence 966 347788998876542110 0001111111236678899999998776543 246
Q ss_pred CChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCC-chhhccceEEEEcCC
Q 001446 993 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPA-LIPFHSLELRLIDGE 1065 (1075)
Q Consensus 993 LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls-~i~~~~~~l~l~~g~ 1065 (1075)
|||||+||+.|||||+.+|++|+|||||+++|+.++..+++++++ .||||++|+|.++ ..+|.|+++-| ++.
T Consensus 140 LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~L-n~~ 215 (254)
T COG1121 140 LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICL-NRH 215 (254)
T ss_pred cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEE-cCe
Confidence 999999999999999999999999999999999999998887643 5999999999996 67899999988 443
No 140
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.5e-39 Score=346.55 Aligned_cols=197 Identities=29% Similarity=0.437 Sum_probs=167.9
Q ss_pred EEEEeEEEEcCCC---CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc-c---------c
Q 001446 182 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-D---------L 248 (1075)
Q Consensus 182 i~~~~v~~~~~~~---~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~-~---------~ 248 (1075)
++++|+++.|+++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 4689999999643 6799999999999999999999999999999999999999999999998641 1 2
Q ss_pred cccEEEEcCCCCCCcC-CHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHH
Q 001446 249 NKEIFYVPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 327 (1075)
Q Consensus 249 ~~~i~~v~Q~~~~~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lA 327 (1075)
++.++|+||+|.++.. |++||+.++............+++.++++.+++.+..++.+ .+||||||||++||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la 152 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNHYP--------SELSGGQQQRVAIA 152 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhcCh--------hhcCHHHHHHHHHH
Confidence 3579999999988775 99999987543211111112346778999999988877766 68999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 328 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 328 ral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
|||+.+|+++||||||++||+.+++.+.+.+++ .|+|+|++||+++.+..||++++|++
T Consensus 153 ~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~ 215 (218)
T cd03255 153 RALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRD 215 (218)
T ss_pred HHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeC
Confidence 999999999999999999999999999887754 37899999999998889999999976
No 141
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-39 Score=363.39 Aligned_cols=198 Identities=26% Similarity=0.398 Sum_probs=172.6
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC----ccccccEEEE
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFYV 255 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~----~~~~~~i~~v 255 (1075)
..|+++|+++.|+ +.++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.+ ...+++|+||
T Consensus 5 ~~l~~~~l~~~~~-~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v 83 (351)
T PRK11432 5 NFVVLKNITKRFG-SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDICMV 83 (351)
T ss_pred cEEEEEeEEEEEC-CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEE
Confidence 4799999999995 4679999999999999999999999999999999999999999999999964 1224689999
Q ss_pred cCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCC
Q 001446 256 PQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 334 (1075)
Q Consensus 256 ~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p 334 (1075)
||++.+|+ .|++||+.|+............+++.++++.+++.++.++.| .+|||||||||+|||||+.+|
T Consensus 84 fQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~--------~~LSgGq~QRVaLARaL~~~P 155 (351)
T PRK11432 84 FQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYV--------DQISGGQQQRVALARALILKP 155 (351)
T ss_pred eCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHHHHHHHHHcCC
Confidence 99998886 599999999864322111223457788999999999988887 689999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 335 KFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 335 ~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
+++|||||||+||+..+.++.+.+++ .|+|+|+||||.+.+ ..+|+|++|++
T Consensus 156 ~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~ 212 (351)
T PRK11432 156 KVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNK 212 (351)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999998887753 489999999999886 67999999986
No 142
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-39 Score=343.41 Aligned_cols=197 Identities=27% Similarity=0.347 Sum_probs=167.8
Q ss_pred EEEEeEEEEcCCC---CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-ccccccEEEEcC
Q 001446 182 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-SDLNKEIFYVPQ 257 (1075)
Q Consensus 182 i~~~~v~~~~~~~---~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-~~~~~~i~~v~Q 257 (1075)
++++|+++.|+++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|+||
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q 80 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQ 80 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEec
Confidence 4689999999642 579999999999999999999999999999999999999999999999864 234568999999
Q ss_pred CCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCE
Q 001446 258 RPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 336 (1075)
Q Consensus 258 ~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~i 336 (1075)
+|.++. .|++||+.++............+++.++++.+++.+..++.+ .+||||||||++|||||+.+|++
T Consensus 81 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrl~la~al~~~p~l 152 (220)
T cd03293 81 QDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYP--------HQLSGGMRQRVALARALAVDPDV 152 (220)
T ss_pred ccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCc--------ccCCHHHHHHHHHHHHHHcCCCE
Confidence 998876 699999987532111111112356778999999988888766 68999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 337 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 337 llLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
+||||||++||+.++..+++.+++ .++|+|++||+++.+ ..||++++|++
T Consensus 153 llLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 207 (220)
T cd03293 153 LLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSA 207 (220)
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 999999999999999999888753 378999999999976 57999999985
No 143
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.1e-39 Score=339.44 Aligned_cols=192 Identities=30% Similarity=0.404 Sum_probs=166.4
Q ss_pred EEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC---ccccccEEEEcCCC
Q 001446 183 EFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG---SDLNKEIFYVPQRP 259 (1075)
Q Consensus 183 ~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~---~~~~~~i~~v~Q~~ 259 (1075)
+++|+++.|++++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...+++++|+||+|
T Consensus 1 ~~~~l~~~~~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q~~ 80 (205)
T cd03226 1 RIENISFSYKKGTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQDV 80 (205)
T ss_pred CcccEEEEeCCcCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEecCh
Confidence 367899998643679999999999999999999999999999999999999999999999864 22356799999998
Q ss_pred --CCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCEE
Q 001446 260 --YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFA 337 (1075)
Q Consensus 260 --~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~il 337 (1075)
.++..|++||+.++..... ....++.++++.+++.+..++.| .+||||||||++|||||+.+|+++
T Consensus 81 ~~~~~~~tv~e~l~~~~~~~~----~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~~~p~ll 148 (205)
T cd03226 81 DYQLFTDSVREELLLGLKELD----AGNEQAETVLKDLDLYALKERHP--------LSLSGGQKQRLAIAAALLSGKDLL 148 (205)
T ss_pred hhhhhhccHHHHHhhhhhhcC----ccHHHHHHHHHHcCCchhcCCCc--------hhCCHHHHHHHHHHHHHHhCCCEE
Confidence 3567899999987643211 12356788999999998888776 689999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 338 ILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 338 lLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 149 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 201 (205)
T cd03226 149 IFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLAN 201 (205)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999888764 4889999999999885 6999999975
No 144
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-39 Score=329.74 Aligned_cols=200 Identities=21% Similarity=0.234 Sum_probs=167.1
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEc
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 915 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~Vp 915 (1075)
.+++++|+..|++ ..||+|+||+|++||.|+|+||||||||||++++.||..|++|+|.++|..+... ...++||+
T Consensus 3 ~l~i~~v~~~f~~-~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p---~~~~~~vF 78 (248)
T COG1116 3 LLEIEGVSKSFGG-VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP---GPDIGYVF 78 (248)
T ss_pred eEEEEeeEEEeCc-eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC---CCCEEEEe
Confidence 4789999999976 7899999999999999999999999999999999999999999999999987433 34599999
Q ss_pred CCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCC
Q 001446 916 QRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 994 (1075)
Q Consensus 916 QdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 994 (1075)
|++.||+ -|+++|+.+|..... . ......+.+.++|+.+||..+-+. +..+||
T Consensus 79 Q~~~LlPW~Tv~~NV~l~l~~~~--~--------------~~~e~~~~a~~~L~~VgL~~~~~~----------~P~qLS 132 (248)
T COG1116 79 QEDALLPWLTVLDNVALGLELRG--K--------------SKAEARERAKELLELVGLAGFEDK----------YPHQLS 132 (248)
T ss_pred ccCcccchhhHHhhheehhhccc--c--------------chHhHHHHHHHHHHHcCCcchhhc----------CccccC
Confidence 9999998 699999988653100 0 000012345678899998655433 346799
Q ss_pred hhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHH----HhcCceEEEecCCCC-chhhccceEEEEcCC
Q 001446 995 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLA----KDMGITFVTSSQRPA-LIPFHSLELRLIDGE 1065 (1075)
Q Consensus 995 gGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~----~~~~~TvI~IaHRls-~i~~~~~~l~l~~g~ 1065 (1075)
||||||+||||||+.+|+||+||||-||||+-|...+|+.+ ++.++||+.|||..+ .+-..|++++|.++-
T Consensus 133 GGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P 208 (248)
T COG1116 133 GGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRP 208 (248)
T ss_pred hHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCC
Confidence 99999999999999999999999999999999988877654 346899999999995 888999999997654
No 145
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-39 Score=325.66 Aligned_cols=203 Identities=29% Similarity=0.355 Sum_probs=161.1
Q ss_pred ceEEeeeeeeCCCcc---ccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc---CCcC
Q 001446 836 SISFSKLDIITPSQK---LLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGC 909 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~---~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~---~~r~ 909 (1075)
-++.+|++++|+... ++|+||||+|.+||++||||+||||||||.++|.|+-.|.+|+|.+||..+.... ..+.
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 378999999998765 7999999999999999999999999999999999999999999999998776642 3355
Q ss_pred cEEEEcCCCCC---CCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccc
Q 001446 910 GIFYVPQRPYT---CLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 986 (1075)
Q Consensus 910 ~i~~VpQdP~L---f~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~ 986 (1075)
.+-+|+|||+- ..-|+++-|.-| +...+.+ ....++.++|+.|||..-.-
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Ep----------l~~~~~~--------~~~~~i~~~L~~VgL~~~~l--------- 135 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEP----------LRPHGLS--------KSQQRIAELLDQVGLPPSFL--------- 135 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhh----------hccCCcc--------HHHHHHHHHHHHcCCCHHHH---------
Confidence 69999999973 123555544322 2211111 12334778888888843221
Q ss_pred cccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHH----hcCceEEEecCCCCchh-hccceEEE
Q 001446 987 LNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAK----DMGITFVTSSQRPALIP-FHSLELRL 1061 (1075)
Q Consensus 987 ~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~----~~~~TvI~IaHRls~i~-~~~~~l~l 1061 (1075)
..+...||||||||+||||||.-+||+||||||||+||+-++..|.+++. +.+.|+|.|+|.++.+. ++|++.+|
T Consensus 136 ~R~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm 215 (252)
T COG1124 136 DRRPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVM 215 (252)
T ss_pred hcCchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeee
Confidence 12345699999999999999999999999999999999999998877653 36889999999999765 78999999
Q ss_pred EcCC
Q 001446 1062 IDGE 1065 (1075)
Q Consensus 1062 ~~g~ 1065 (1075)
.+|.
T Consensus 216 ~~G~ 219 (252)
T COG1124 216 DNGQ 219 (252)
T ss_pred eCCe
Confidence 7765
No 146
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-39 Score=342.00 Aligned_cols=196 Identities=30% Similarity=0.440 Sum_probs=166.5
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC----ccccccEEEEcC
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFYVPQ 257 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~----~~~~~~i~~v~Q 257 (1075)
++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|+||
T Consensus 1 l~~~~l~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v~q 79 (213)
T cd03259 1 LELKGLSKTYG-SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMVFQ 79 (213)
T ss_pred CeeeeeEEEeC-CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEEcC
Confidence 46899999996 4679999999999999999999999999999999999999999999999864 123457999999
Q ss_pred CCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCE
Q 001446 258 RPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 336 (1075)
Q Consensus 258 ~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~i 336 (1075)
+|.++. .|++||+.++............+++.++++.+++.+..++.+ .+||||||||++|||||+.+|++
T Consensus 80 ~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrl~la~al~~~p~~ 151 (213)
T cd03259 80 DYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRYP--------HELSGGQQQRVALARALAREPSL 151 (213)
T ss_pred chhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcCh--------hhCCHHHHHHHHHHHHHhcCCCE
Confidence 998775 599999987532211111112345778899999988888766 68999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 337 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 337 llLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
+||||||++||+.++..+++.+++ .|+|+|++||+++.+ ..||++++|++
T Consensus 152 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~ 206 (213)
T cd03259 152 LLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNE 206 (213)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEEC
Confidence 999999999999999999888764 388999999999986 56999999986
No 147
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=6.2e-39 Score=340.85 Aligned_cols=197 Identities=30% Similarity=0.438 Sum_probs=168.2
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc---------cccccE
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNKEI 252 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~~~~i 252 (1075)
++++|+++.|++++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.+
T Consensus 2 l~~~~l~~~~~~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 81 (214)
T TIGR02673 2 IEFHNVSKAYPGGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRRI 81 (214)
T ss_pred EEEEeeeEEeCCCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhhe
Confidence 78999999996456899999999999999999999999999999999999999999999998641 135679
Q ss_pred EEEcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHc
Q 001446 253 FYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 253 ~~v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~ 331 (1075)
+|+||+|.++. .|++||+.++............+++.++++.+++.+..++.+ .+||||||||++|||||+
T Consensus 82 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~la~al~ 153 (214)
T TIGR02673 82 GVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP--------EQLSGGEQQRVAIARAIV 153 (214)
T ss_pred EEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh--------hhCCHHHHHHHHHHHHHh
Confidence 99999998875 599999987532111111112356778999999988777766 689999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
.+|+++||||||++||+.++..+.+.+++ .++|+|++||+++.+. .||++++|++
T Consensus 154 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~ 212 (214)
T TIGR02673 154 NSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDD 212 (214)
T ss_pred CCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecC
Confidence 99999999999999999999999888764 4899999999999876 5999999975
No 148
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=1.5e-38 Score=321.99 Aligned_cols=166 Identities=54% Similarity=0.997 Sum_probs=152.8
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCccccccEEEEcCCCCC
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYT 261 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~~~ 261 (1075)
++++|+++.|++++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+++. ++++|++|++.+
T Consensus 1 i~~~~~~~~~~~~~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-----~~i~~~~q~~~~ 75 (166)
T cd03223 1 IELENLSLATPDGRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-----EDLLFLPQRPYL 75 (166)
T ss_pred CEEEEEEEEcCCCCeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-----ceEEEECCCCcc
Confidence 468999999975568999999999999999999999999999999999999999999999873 579999999998
Q ss_pred CcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeC
Q 001446 262 AVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDE 341 (1075)
Q Consensus 262 ~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~illLDE 341 (1075)
+..|++||+.++ .+ .+||||||||++||||++++|+++||||
T Consensus 76 ~~~tv~~nl~~~------------------------------~~--------~~LS~G~~~rv~laral~~~p~~lllDE 117 (166)
T cd03223 76 PLGTLREQLIYP------------------------------WD--------DVLSGGEQQRLAFARLLLHKPKFVFLDE 117 (166)
T ss_pred ccccHHHHhhcc------------------------------CC--------CCCCHHHHHHHHHHHHHHcCCCEEEEEC
Confidence 888999999753 12 5899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEEecChhhHhhCCeEEEEcCCCcE
Q 001446 342 CTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGEW 390 (1075)
Q Consensus 342 pts~LD~~~~~~i~~~l~~~~~t~i~vtH~~~~~~~~d~i~~l~~~g~~ 390 (1075)
||++||+.+.+.+.+.+++.+.|+|++||+.+....||++++++++|+|
T Consensus 118 Pt~~LD~~~~~~l~~~l~~~~~tiiivsh~~~~~~~~d~i~~l~~~~~~ 166 (166)
T cd03223 118 ATSALDEESEDRLYQLLKELGITVISVGHRPSLWKFHDRVLDLDGEGGW 166 (166)
T ss_pred CccccCHHHHHHHHHHHHHhCCEEEEEeCChhHHhhCCEEEEEcCCCCC
Confidence 9999999999999999988889999999999988899999999987754
No 149
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-39 Score=351.55 Aligned_cols=199 Identities=24% Similarity=0.329 Sum_probs=170.8
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 254 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 254 (1075)
.++++|+++.|+++.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|
T Consensus 4 ~l~~~~l~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 83 (274)
T PRK13647 4 IIEVEDLHFRYKDGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVGL 83 (274)
T ss_pred eEEEEEEEEEeCCCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEEE
Confidence 58999999999755679999999999999999999999999999999999999999999999964 123567999
Q ss_pred EcCCC--CCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcC
Q 001446 255 VPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 332 (1075)
Q Consensus 255 v~Q~~--~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~ 332 (1075)
+||+| .++..|+++|+.++............+++.++++.++|.+..++.| .+||||||||++|||||+.
T Consensus 84 v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~--------~~LSgG~~qrv~laraL~~ 155 (274)
T PRK13647 84 VFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP--------YHLSYGQKKRVAIAGVLAM 155 (274)
T ss_pred EecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh--------hhCCHHHHHHHHHHHHHHc
Confidence 99998 5677899999987633211111112345778999999998888877 6899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhH-hhCCeEEEEcCC
Q 001446 333 KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDGE 387 (1075)
Q Consensus 333 ~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~-~~~d~i~~l~~~ 387 (1075)
+|+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+ +.||++++|+++
T Consensus 156 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G 214 (274)
T PRK13647 156 DPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEG 214 (274)
T ss_pred CCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999888754 389999999999987 579999999863
No 150
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.7e-38 Score=345.90 Aligned_cols=198 Identities=22% Similarity=0.336 Sum_probs=175.1
Q ss_pred cEEEEeEEEEcCC-CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEE
Q 001446 181 YIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIF 253 (1075)
Q Consensus 181 ~i~~~~v~~~~~~-~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~ 253 (1075)
.|+++|+++.|++ +.++|+|+||+|++||+++|+||||||||||+++|+|+++ .+|+|.++|.+ ..++++|+
T Consensus 2 ~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i~ 80 (275)
T cd03289 2 QMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAFG 80 (275)
T ss_pred eEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhEE
Confidence 4899999999974 4679999999999999999999999999999999999998 78999999964 24567899
Q ss_pred EEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCChhHHHHHHHHHHH
Q 001446 254 YVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLF 330 (1075)
Q Consensus 254 ~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkqRl~lAral 330 (1075)
|+||+|.+|++|+++|+.... ...++++.++++.++|.+..+++|.+..+ +.|..||||||||++||||+
T Consensus 81 ~v~q~~~lf~~tv~~nl~~~~-------~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRal 153 (275)
T cd03289 81 VIPQKVFIFSGTFRKNLDPYG-------KWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSV 153 (275)
T ss_pred EECCCcccchhhHHHHhhhcc-------CCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999996321 12356788899999999999998865332 46788999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 331 YHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 331 ~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
+++|+++||||||++||+.+...+.+.+++ .++|+|+|||+++.+..||+|++|++
T Consensus 154 l~~p~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~ 211 (275)
T cd03289 154 LSKAKILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEE 211 (275)
T ss_pred hcCCCEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecC
Confidence 999999999999999999999999998875 47899999999999988999999986
No 151
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=6.1e-39 Score=361.64 Aligned_cols=198 Identities=25% Similarity=0.384 Sum_probs=172.4
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC----ccccccEEEEc
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFYVP 256 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~----~~~~~~i~~v~ 256 (1075)
.++++|+++.|+ +..+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.+ ...++.++|||
T Consensus 4 ~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~v~ 82 (353)
T TIGR03265 4 YLSIDNIRKRFG-AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGIVF 82 (353)
T ss_pred EEEEEEEEEEeC-CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 589999999996 4679999999999999999999999999999999999999999999999964 12356799999
Q ss_pred CCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCC
Q 001446 257 QRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 335 (1075)
Q Consensus 257 Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~ 335 (1075)
|++.+|+ .||+||+.|+.............++.++++.++|+++.++.| .+|||||||||+|||||+.+|+
T Consensus 83 Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~--------~~LSgGq~QRvaLARaL~~~P~ 154 (353)
T TIGR03265 83 QSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKYP--------GQLSGGQQQRVALARALATSPG 154 (353)
T ss_pred CCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCCh--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 9998886 699999998754321111123456889999999999999887 6899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcCC
Q 001446 336 FAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 387 (1075)
Q Consensus 336 illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~~ 387 (1075)
++|||||||+||+.++..+.+.+++ .|.|+|+||||.+.+ ..||+|++|+++
T Consensus 155 llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G 211 (353)
T TIGR03265 155 LLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHG 211 (353)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECC
Confidence 9999999999999999998887754 489999999999986 579999999863
No 152
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.2e-39 Score=345.17 Aligned_cols=196 Identities=27% Similarity=0.365 Sum_probs=166.4
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc---------cccccE
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNKEI 252 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~~~~i 252 (1075)
++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.+
T Consensus 1 l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~i 79 (235)
T cd03261 1 IELRGLTKSFG-GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRRM 79 (235)
T ss_pred CeEEEEEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcce
Confidence 46899999995 46799999999999999999999999999999999999999999999998541 235679
Q ss_pred EEEcCCCCCCcC-CHHHHhcCCCCCCc-ccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHH
Q 001446 253 FYVPQRPYTAVG-TLRDQLIYPLTSDQ-EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 330 (1075)
Q Consensus 253 ~~v~Q~~~~~~~-tv~~ni~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral 330 (1075)
+|+||++.++.. |++||+.++..... .......+++.++++.+++.+..++.+ .+||||||||++|||||
T Consensus 80 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~ia~al 151 (235)
T cd03261 80 GMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDLYP--------AELSGGMKKRVALARAL 151 (235)
T ss_pred EEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHHHHHHHH
Confidence 999999988775 99999987532110 001112345678899999988777766 68999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 331 YHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 331 ~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
+.+|+++||||||++||+.++..+.+.+++ .|+|+|+|||+++.+. .||++++|++
T Consensus 152 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~ 212 (235)
T cd03261 152 ALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYD 212 (235)
T ss_pred hcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEEC
Confidence 999999999999999999999999888764 3889999999999875 6999999986
No 153
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=5.8e-39 Score=335.57 Aligned_cols=206 Identities=25% Similarity=0.291 Sum_probs=168.7
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEEE
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFY 913 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~~ 913 (1075)
.++++|++|.|+ ++++|+|+||+|++||.++|+||+|||||||+++|.|+..|.+|+|.+||.++.+++ .+-++++|
T Consensus 2 ~L~~~~ls~~y~-~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia~ 80 (258)
T COG1120 2 MLEVENLSFGYG-GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLAY 80 (258)
T ss_pred eeEEEEEEEEEC-CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEEE
Confidence 378999999997 678999999999999999999999999999999999999999999999999999873 35567999
Q ss_pred EcCCCCC-CCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccch-HHHHHHHHhCCchhhhhhhccCCcccccccc
Q 001446 914 VPQRPYT-CLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILD-SYLKTILEGVRLSYLLEREEVGWDANLNWED 991 (1075)
Q Consensus 914 VpQdP~L-f~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d-~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~ 991 (1075)
|||+|.. |.-|++|=+.++....... + . .....| +.+.++|+.+++.++.++. -.
T Consensus 81 vpQ~~~~~~~~tV~d~V~~GR~p~~~~-----------~-~-~~~~~D~~~v~~aL~~~~~~~la~r~----------~~ 137 (258)
T COG1120 81 VPQSPSAPFGLTVYELVLLGRYPHLGL-----------F-G-RPSKEDEEIVEEALELLGLEHLADRP----------VD 137 (258)
T ss_pred eccCCCCCCCcEEeehHhhcCCccccc-----------c-c-CCCHhHHHHHHHHHHHhCcHHHhcCc----------cc
Confidence 9999754 5569999887643210000 0 0 001112 2466778888887776543 24
Q ss_pred CCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHH----hcCceEEEecCCCC-chhhccceEEEEcCC
Q 001446 992 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAK----DMGITFVTSSQRPA-LIPFHSLELRLIDGE 1065 (1075)
Q Consensus 992 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~----~~~~TvI~IaHRls-~i~~~~~~l~l~~g~ 1065 (1075)
.||||||||+.|||||.++|+||+||||||+||...+-.+.++++ +.|+|+|+|.|.+. ..+|.|+++.|.+|+
T Consensus 138 ~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~ 216 (258)
T COG1120 138 ELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGK 216 (258)
T ss_pred ccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCe
Confidence 699999999999999999999999999999999999887766654 35899999999996 789999999998876
No 154
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1e-38 Score=339.39 Aligned_cols=197 Identities=25% Similarity=0.337 Sum_probs=167.7
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc---------cccccE
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNKEI 252 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~~~~i 252 (1075)
++++|+++.|++++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.+
T Consensus 1 l~~~~l~~~~~~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i 80 (214)
T cd03292 1 IEFINVTKTYPNGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRKI 80 (214)
T ss_pred CEEEEEEEEeCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHhe
Confidence 46899999997556799999999999999999999999999999999999999999999998631 134679
Q ss_pred EEEcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHc
Q 001446 253 FYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 253 ~~v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~ 331 (1075)
+|+||+|.++. .|++||+.++............+++.++++.+++.+..++.+ .+||||||||++|||||+
T Consensus 81 ~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~ 152 (214)
T cd03292 81 GVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALP--------AELSGGEQQRVAIARAIV 152 (214)
T ss_pred EEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh--------hhcCHHHHHHHHHHHHHH
Confidence 99999998877 599999987532211111112345778899999988877766 689999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
.+|+++||||||++||+.+.+.+.+.+++ .++|+|++||+.+.+. .||++++|++
T Consensus 153 ~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~ 211 (214)
T cd03292 153 NSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALER 211 (214)
T ss_pred cCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 99999999999999999999999887754 4799999999999886 5899999975
No 155
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-38 Score=343.44 Aligned_cols=197 Identities=24% Similarity=0.310 Sum_probs=167.2
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc-cccccEEEEcCCC
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-DLNKEIFYVPQRP 259 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~-~~~~~i~~v~Q~~ 259 (1075)
+++++|+++.|+ ++++++|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+. .....++|+||++
T Consensus 1 ml~~~~l~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~~ 79 (255)
T PRK11248 1 MLQISHLYADYG-GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGPGAERGVVFQNE 79 (255)
T ss_pred CEEEEEEEEEeC-CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCCcEEEEeCCC
Confidence 378999999996 46799999999999999999999999999999999999999999999998642 2334699999999
Q ss_pred CCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCEEE
Q 001446 260 YTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAI 338 (1075)
Q Consensus 260 ~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~ill 338 (1075)
.++. .|++||+.++............+++.++++.+++.+..++.+ .+||||||||++|||||+.+|+++|
T Consensus 80 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgGq~qrl~laral~~~p~lll 151 (255)
T PRK11248 80 GLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEKRYI--------WQLSGGQRQRVGIARALAANPQLLL 151 (255)
T ss_pred ccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhhCCh--------hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 8776 599999987532111111112345778999999988777765 6899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 339 LDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 339 LDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
|||||++||+.+...+.+.+++ .|+|+|++||+++.+ ..||++++|++
T Consensus 152 LDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~ 204 (255)
T PRK11248 152 LDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSP 204 (255)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 9999999999999999887754 389999999999987 46999999985
No 156
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-38 Score=341.17 Aligned_cols=198 Identities=24% Similarity=0.360 Sum_probs=168.0
Q ss_pred cEEEEeEEEEcCCC---CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc-c--------c
Q 001446 181 YIEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-D--------L 248 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~---~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~-~--------~ 248 (1075)
.++++||++.|+++ +++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 68999999999743 4799999999999999999999999999999999999999999999998641 1 1
Q ss_pred -cccEEEEcCCCCCCcC-CHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHH
Q 001446 249 -NKEIFYVPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 326 (1075)
Q Consensus 249 -~~~i~~v~Q~~~~~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~l 326 (1075)
++.++|+||+|.++.. |++||+.++............+++.++++.+++.+..++.+ .+||||||||++|
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgG~~qrl~l 156 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANHRP--------SELSGGERQRVAI 156 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhCCh--------hhCCHHHHHHHHH
Confidence 2579999999987764 99999987432111111112346778999999988777765 6899999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 327 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 327 Aral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
|||++.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+..+|++++|++
T Consensus 157 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~ 220 (233)
T PRK11629 157 ARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRD 220 (233)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEEC
Confidence 9999999999999999999999999999887754 37999999999999988899999976
No 157
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.6e-38 Score=359.62 Aligned_cols=198 Identities=26% Similarity=0.405 Sum_probs=171.7
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc----cccccEEEE
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYV 255 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~----~~~~~i~~v 255 (1075)
..++++|+++.|+ +.++|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|.+. ..++.++||
T Consensus 13 ~~L~l~~l~~~~~-~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v 91 (375)
T PRK09452 13 PLVELRGISKSFD-GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVNTV 91 (375)
T ss_pred ceEEEEEEEEEEC-CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEEE
Confidence 4699999999996 46799999999999999999999999999999999999999999999999641 224679999
Q ss_pred cCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCC
Q 001446 256 PQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 334 (1075)
Q Consensus 256 ~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p 334 (1075)
||++.+|+ .||+||+.|+............+++.++++.++|.++.++.| .+|||||||||+|||||+.+|
T Consensus 92 fQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p--------~~LSgGq~QRVaLARaL~~~P 163 (375)
T PRK09452 92 FQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP--------HQLSGGQQQRVAIARAVVNKP 163 (375)
T ss_pred ecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh--------hhCCHHHHHHHHHHHHHhcCC
Confidence 99998876 499999999764322111112346778999999999999988 689999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 335 KFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 335 ~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
+++|||||||+||...+..+.+.+++ .|+|+|+||||.+.+ ..+|+|++|++
T Consensus 164 ~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~ 220 (375)
T PRK09452 164 KVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRD 220 (375)
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999998887754 489999999999886 57999999986
No 158
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.4e-38 Score=337.67 Aligned_cols=194 Identities=32% Similarity=0.462 Sum_probs=165.1
Q ss_pred EEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-ccccccEEEEcCCCCC-
Q 001446 184 FSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-SDLNKEIFYVPQRPYT- 261 (1075)
Q Consensus 184 ~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-~~~~~~i~~v~Q~~~~- 261 (1075)
++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...+++++|+||+|.+
T Consensus 2 ~~~l~~~~~-~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q~~~~~ 80 (213)
T cd03235 2 VEDLTVSYG-GHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQRRSID 80 (213)
T ss_pred cccceeEEC-CEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEeccccccc
Confidence 678999886 3679999999999999999999999999999999999999999999999865 2345679999999876
Q ss_pred --CcCCHHHHhcCCCCCCc----ccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCC
Q 001446 262 --AVGTLRDQLIYPLTSDQ----EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 335 (1075)
Q Consensus 262 --~~~tv~~ni~~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~ 335 (1075)
+..|++||+.++..... .......+++.++++.+++.+..++.+ .+||||||||++|||||+.+|+
T Consensus 81 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~la~al~~~p~ 152 (213)
T cd03235 81 RDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI--------GELSGGQQQRVLLARALVQDPD 152 (213)
T ss_pred cCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc--------ccCCHHHHHHHHHHHHHHcCCC
Confidence 45799999987643210 001112356778999999988877766 6899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 336 FAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 336 illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 153 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~ 207 (213)
T cd03235 153 LLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNR 207 (213)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcC
Confidence 9999999999999999999887764 4789999999999875 6999999975
No 159
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.7e-38 Score=339.17 Aligned_cols=197 Identities=25% Similarity=0.361 Sum_probs=166.6
Q ss_pred EEEEeEEEEcCCC---CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc------c---cc
Q 001446 182 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D---LN 249 (1075)
Q Consensus 182 i~~~~v~~~~~~~---~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~---~~ 249 (1075)
++++||++.|+++ +++|+++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . ++
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 6899999999642 4799999999999999999999999999999999999999999999998641 1 12
Q ss_pred -ccEEEEcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHH
Q 001446 250 -KEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 327 (1075)
Q Consensus 250 -~~i~~v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lA 327 (1075)
+.++|+||++.++. .|++||+.++............+++.++++.+++.+..++.+ .+||||||||++||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la 153 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINHRP--------SELSGGERQRVAIA 153 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh--------hhCCHHHHHHHHHH
Confidence 57999999998875 599999987432111101112345678899999988877766 68999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 328 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 328 ral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
|||+.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+..+|++++|++
T Consensus 154 ral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~ 216 (221)
T TIGR02211 154 RALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKD 216 (221)
T ss_pred HHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeC
Confidence 999999999999999999999999999887753 37899999999999888999999985
No 160
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=9.9e-39 Score=338.49 Aligned_cols=196 Identities=29% Similarity=0.420 Sum_probs=164.3
Q ss_pred EEEeEEEEcCCC-CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEEE
Q 001446 183 EFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYV 255 (1075)
Q Consensus 183 ~~~~v~~~~~~~-~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v 255 (1075)
+++|+++.|++. +++|+++||++++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 367999998642 579999999999999999999999999999999999999999999999853 1234679999
Q ss_pred cCCCC--CCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCC
Q 001446 256 PQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHK 333 (1075)
Q Consensus 256 ~Q~~~--~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~ 333 (1075)
||+|. ++..|++||+.++.............++.++++.+++.+..++.+ .+||||||||++|||||+.+
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~laral~~~ 152 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDRSP--------FTLSGGQKQRVAIAGVLAMD 152 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcCCc--------ccCCHHHHHHHHHHHHHhcC
Confidence 99983 567899999987532111001112345677899999988777766 68999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHhh-CCeEEEEcC
Q 001446 334 PKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAF-HDVVLSLDG 386 (1075)
Q Consensus 334 p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~~-~d~i~~l~~ 386 (1075)
|+++||||||++||+.++..+.+.+++ .|+|+|++||+++.+.. ||++++|++
T Consensus 153 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 153 PDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 999999999999999999999888754 37899999999998864 999999975
No 161
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-38 Score=351.23 Aligned_cols=197 Identities=25% Similarity=0.357 Sum_probs=166.8
Q ss_pred EEEEeEEEEcCCC----CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc--------ccc
Q 001446 182 IEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------DLN 249 (1075)
Q Consensus 182 i~~~~v~~~~~~~----~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~--------~~~ 249 (1075)
++++||++.|++. +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .++
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 7899999999742 4799999999999999999999999999999999999999999999999641 235
Q ss_pred ccEEEEcCCC--CCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCCh--hHHhcCCCCcccCCCCCCChhHHHHHH
Q 001446 250 KEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE--YLLDRYPPEKEINWGDELSLGEQQRLG 325 (1075)
Q Consensus 250 ~~i~~v~Q~~--~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~~~~~g~~LSgGqkqRl~ 325 (1075)
++++||||+| .++..|++||+.++............+++.++++.++|. +..++.+ .+||||||||++
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~--------~~LSgGq~qrv~ 154 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKDKSP--------FELSGGQKRRVA 154 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhccCCc--------ccCCHHHHHHHH
Confidence 6899999998 466789999998753221111111234577899999997 5566655 689999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 326 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 326 lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
|||||+.+|+++||||||++||+.+..++.+.+++ .|+|+|++||+++.+ ..||+|++|++
T Consensus 155 iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~ 220 (287)
T PRK13637 155 IAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNK 220 (287)
T ss_pred HHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999887753 389999999999987 57999999986
No 162
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.1e-38 Score=359.74 Aligned_cols=198 Identities=22% Similarity=0.311 Sum_probs=171.4
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCc--cEEEeCCcCc----cccccEE
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVS--GHIAKPGVGS----DLNKEIF 253 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~--G~i~~~~~~~----~~~~~i~ 253 (1075)
+.++++|+++.|+ +..+|+|+||+|++||+++|+||||||||||+++|+|+.+|++ |+|.++|.+. ..++.|+
T Consensus 4 ~~l~~~~l~~~~~-~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ig 82 (362)
T TIGR03258 4 GGIRIDHLRVAYG-ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRGLA 82 (362)
T ss_pred eEEEEEEEEEEEC-CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCCEE
Confidence 4689999999996 4679999999999999999999999999999999999999999 9999998641 2346799
Q ss_pred EEcCCCCCCcC-CHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcC
Q 001446 254 YVPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 332 (1075)
Q Consensus 254 ~v~Q~~~~~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~ 332 (1075)
||||++.+|.. ||+||+.|+.............++.++++.++|+++.++.| .+|||||||||+|||||+.
T Consensus 83 ~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~--------~~LSgGq~QRvaLARAL~~ 154 (362)
T TIGR03258 83 LLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLP--------AQLSGGMQQRIAIARAIAI 154 (362)
T ss_pred EEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCCh--------hhCCHHHHHHHHHHHHHhc
Confidence 99999988764 99999998754222111122356788999999999999988 6899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHh---c--CCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 333 KPKFAILDECTSAVTTDMEERFCAKVRA---M--GTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 333 ~p~illLDEpts~LD~~~~~~i~~~l~~---~--~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
+|+++|||||||+||+..+..+.+.+++ . |+|+|+||||++.+ ..+|+|++|++
T Consensus 155 ~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~ 214 (362)
T TIGR03258 155 EPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKD 214 (362)
T ss_pred CCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999998887653 2 78999999999986 57999999986
No 163
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-38 Score=349.41 Aligned_cols=198 Identities=28% Similarity=0.361 Sum_probs=169.9
Q ss_pred cEEEEeEEEEcCC--CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccE
Q 001446 181 YIEFSGVKVVTPT--GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEI 252 (1075)
Q Consensus 181 ~i~~~~v~~~~~~--~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i 252 (1075)
.++++|+++.|++ ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 5899999999964 2469999999999999999999999999999999999999999999999964 1245689
Q ss_pred EEEcCCCC--CCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHH
Q 001446 253 FYVPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 330 (1075)
Q Consensus 253 ~~v~Q~~~--~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral 330 (1075)
+|+||+|. ++..|++|||.++............+++.++++.++|.++.++.| .+||||||||++|||||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~--------~~LSgGq~qrv~lAral 155 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREP--------ARLSGGQKQRVAIAGAV 155 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCc--------ccCCHHHHHHHHHHHHH
Confidence 99999984 456799999998643211111112356788999999998888877 68999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 331 YHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 331 ~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
+.+|++|||||||++||+.+...+.+.+++ .|+|+|++||+++.+..||++++|++
T Consensus 156 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~ 215 (279)
T PRK13650 156 AMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKN 215 (279)
T ss_pred HcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEEC
Confidence 999999999999999999999998887653 38999999999998888999999976
No 164
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-38 Score=341.15 Aligned_cols=197 Identities=27% Similarity=0.390 Sum_probs=167.0
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc----cccccEEEEc
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVP 256 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~----~~~~~i~~v~ 256 (1075)
.++++|+++.|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|+|
T Consensus 2 ~l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v~ 80 (239)
T cd03296 2 SIEVRNVSKRFGD-FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFVF 80 (239)
T ss_pred EEEEEeEEEEECC-EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEEe
Confidence 3789999999964 6799999999999999999999999999999999999999999999998641 1245799999
Q ss_pred CCCCCCc-CCHHHHhcCCCCCCcc----cCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHc
Q 001446 257 QRPYTAV-GTLRDQLIYPLTSDQE----VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 257 Q~~~~~~-~tv~~ni~~~~~~~~~----~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~ 331 (1075)
|+|.++. .|++||+.++...... ......+++.++++.+++.+..++.+ .+||||||||++|||||+
T Consensus 81 q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~la~al~ 152 (239)
T cd03296 81 QHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP--------AQLSGGQRQRVALARALA 152 (239)
T ss_pred cCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh--------hhCCHHHHHHHHHHHHHh
Confidence 9998875 5999999876432111 00112345678899999988877766 689999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
.+|+++||||||++||+.+++.+.+.+++ .|+|+|++||+++.+ ..||++++|++
T Consensus 153 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~ 212 (239)
T cd03296 153 VEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNK 212 (239)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999887754 378999999999976 46999999975
No 165
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-38 Score=352.78 Aligned_cols=200 Identities=22% Similarity=0.273 Sum_probs=168.5
Q ss_pred CccEEEEeEEEEcCCC----CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC--c------
Q 001446 179 ANYIEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG--S------ 246 (1075)
Q Consensus 179 ~~~i~~~~v~~~~~~~----~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~--~------ 246 (1075)
...|+++|+++.|+++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+ .
T Consensus 19 ~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~ 98 (320)
T PRK13631 19 DIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHE 98 (320)
T ss_pred CceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccc
Confidence 3579999999999642 469999999999999999999999999999999999999999999999843 1
Q ss_pred --------------cccccEEEEcCCC--CCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCCh-hHHhcCCCCcc
Q 001446 247 --------------DLNKEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKE 309 (1075)
Q Consensus 247 --------------~~~~~i~~v~Q~~--~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~ 309 (1075)
.++++++||||+| +++..|++||+.++.............++.++++.++|. .+.++.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~---- 174 (320)
T PRK13631 99 LITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDDSYLERSP---- 174 (320)
T ss_pred ccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCChhHhcCCc----
Confidence 2356799999998 678889999998864221111111234567789999996 5666655
Q ss_pred cCCCCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhH-hhCCeEEEEc
Q 001446 310 INWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLD 385 (1075)
Q Consensus 310 ~~~g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~-~~~d~i~~l~ 385 (1075)
.+||||||||++|||||+.+|+++||||||++||+.++..+++.+++ .|+|+|+||||++.+ ..||+|++|+
T Consensus 175 ----~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~ 250 (320)
T PRK13631 175 ----FGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMD 250 (320)
T ss_pred ----ccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEE
Confidence 68999999999999999999999999999999999999999887753 489999999999976 5799999998
Q ss_pred C
Q 001446 386 G 386 (1075)
Q Consensus 386 ~ 386 (1075)
+
T Consensus 251 ~ 251 (320)
T PRK13631 251 K 251 (320)
T ss_pred C
Confidence 6
No 166
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.7e-38 Score=338.56 Aligned_cols=197 Identities=24% Similarity=0.310 Sum_probs=167.4
Q ss_pred EEEEeEEEEcCCC---CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----ccccccEE
Q 001446 182 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIF 253 (1075)
Q Consensus 182 i~~~~v~~~~~~~---~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~ 253 (1075)
++++|+++.|++. .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 81 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLG 81 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEE
Confidence 7899999999743 179999999999999999999999999999999999999999999999864 13456899
Q ss_pred EEcCCCCCCcC-CHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcC
Q 001446 254 YVPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 332 (1075)
Q Consensus 254 ~v~Q~~~~~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~ 332 (1075)
|+||+|.++.. |++||+.+.............+++.++++.+++.+..++.+ .+||||||||++||||++.
T Consensus 82 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~~ 153 (218)
T cd03266 82 FVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLDRRV--------GGFSTGMRQKVAIARALVH 153 (218)
T ss_pred EecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhhhh--------hhcCHHHHHHHHHHHHHhc
Confidence 99999988774 99999976432111111112346778999999988877765 6899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 333 KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 333 ~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .+|++++|++
T Consensus 154 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~ 211 (218)
T cd03266 154 DPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHR 211 (218)
T ss_pred CCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 9999999999999999999999888764 4889999999998764 6999999976
No 167
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-39 Score=313.05 Aligned_cols=198 Identities=26% Similarity=0.311 Sum_probs=172.1
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----ccccccEEEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYV 255 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v 255 (1075)
++++.+++++|++...+++|+||+++.||+++|.||||+||||+||+|++++.|++|+|.++|.+ ...+++||.+
T Consensus 1 Ml~v~~l~K~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~IGVl 80 (245)
T COG4555 1 MLEVTDLTKSYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKIGVL 80 (245)
T ss_pred CeeeeehhhhccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhccee
Confidence 47889999999875569999999999999999999999999999999999999999999999975 3467899999
Q ss_pred cCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCC
Q 001446 256 PQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 334 (1075)
Q Consensus 256 ~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p 334 (1075)
+-+..++. .|++|||.|..............++.++.+.++|.+.+++.. .++|-|+||||+|||||+++|
T Consensus 81 ~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~~rRv--------~~~S~G~kqkV~iARAlvh~P 152 (245)
T COG4555 81 FGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYLDRRV--------GEFSTGMKQKVAIARALVHDP 152 (245)
T ss_pred cCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHHHHHH--------hhhchhhHHHHHHHHHHhcCC
Confidence 96665655 599999987543333333344667888999999999998865 589999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHH---hcCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 335 KFAILDECTSAVTTDMEERFCAKVR---AMGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 335 ~illLDEpts~LD~~~~~~i~~~l~---~~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
++++|||||||||..+.+.+.+.++ ..|+++|+.||.++.++ .||+++++++
T Consensus 153 ~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~ 208 (245)
T COG4555 153 SILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHK 208 (245)
T ss_pred CeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEec
Confidence 9999999999999999988877654 46999999999999987 8999999986
No 168
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=3.2e-38 Score=337.06 Aligned_cols=197 Identities=25% Similarity=0.337 Sum_probs=166.8
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc---------cccccE
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNKEI 252 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~~~~i 252 (1075)
++++|+++.|++++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.+
T Consensus 2 l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i 81 (222)
T PRK10908 2 IRFEHVSKAYLGGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQI 81 (222)
T ss_pred EEEEeeEEEecCCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhhe
Confidence 78999999995456899999999999999999999999999999999999999999999998641 135679
Q ss_pred EEEcCCCCC-CcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHc
Q 001446 253 FYVPQRPYT-AVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 253 ~~v~Q~~~~-~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~ 331 (1075)
+|+||+|.+ +..|++||+.++............+++.++++.+++.+..++.+ .+||||||||++||||++
T Consensus 82 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~ 153 (222)
T PRK10908 82 GMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNFP--------IQLSGGEQQRVGIARAVV 153 (222)
T ss_pred EEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCc--------hhCCHHHHHHHHHHHHHH
Confidence 999999986 45699999987532211111112235668899999988877766 689999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
.+|+++||||||++||+.+.+.+.+.+++ .+.|+|++||+++.+. .||++++|++
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 212 (222)
T PRK10908 154 NKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSD 212 (222)
T ss_pred cCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999998887754 4789999999999886 5899999986
No 169
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-38 Score=357.27 Aligned_cols=198 Identities=27% Similarity=0.376 Sum_probs=169.2
Q ss_pred cEEEEeEEEEcCC---CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc---------cc
Q 001446 181 YIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DL 248 (1075)
Q Consensus 181 ~i~~~~v~~~~~~---~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~ 248 (1075)
+|+++|+++.|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..
T Consensus 1 mi~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 80 (343)
T PRK11153 1 MIELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKA 80 (343)
T ss_pred CEEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 3789999999962 35799999999999999999999999999999999999999999999998641 12
Q ss_pred cccEEEEcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHH
Q 001446 249 NKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 327 (1075)
Q Consensus 249 ~~~i~~v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lA 327 (1075)
+++|+|+||++.++. .|++||+.++............+++.++++.++|.+..++.| .+||||||||++||
T Consensus 81 ~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~--------~~LSgGq~qRv~lA 152 (343)
T PRK11153 81 RRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADRYP--------AQLSGGQKQRVAIA 152 (343)
T ss_pred hcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh--------hhCCHHHHHHHHHH
Confidence 568999999998876 699999987643211111112346778999999998888776 68999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 328 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 328 ral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|||+++|+++||||||++||+.++..+++.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 153 raL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~ 216 (343)
T PRK11153 153 RALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDA 216 (343)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999888764 3889999999999875 6999999986
No 170
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.8e-38 Score=335.51 Aligned_cols=196 Identities=24% Similarity=0.375 Sum_probs=166.0
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc----cccccEEEEcC
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVPQ 257 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~----~~~~~i~~v~Q 257 (1075)
++++|+++.|++ +++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|+||
T Consensus 1 i~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~~q 79 (213)
T cd03301 1 VELENVTKRFGN-VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMVFQ 79 (213)
T ss_pred CEEEeeEEEECC-eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEEec
Confidence 468999999864 6799999999999999999999999999999999999999999999998641 12357999999
Q ss_pred CCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCE
Q 001446 258 RPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 336 (1075)
Q Consensus 258 ~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~i 336 (1075)
++.++. .|++||+.++............+++.++++.+++.+..++.+ .+||||||||++|||||+.+|++
T Consensus 80 ~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qr~~laral~~~p~l 151 (213)
T cd03301 80 NYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKP--------KQLSGGQRQRVALGRAIVREPKV 151 (213)
T ss_pred ChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCCh--------hhCCHHHHHHHHHHHHHhcCCCE
Confidence 998875 599999987532211111112345678899999988888776 68999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 337 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 337 llLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
+||||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .+|+++++++
T Consensus 152 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~ 206 (213)
T cd03301 152 FLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMND 206 (213)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEEC
Confidence 999999999999999999887754 3889999999998875 6999999975
No 171
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-38 Score=350.74 Aligned_cols=197 Identities=19% Similarity=0.266 Sum_probs=167.1
Q ss_pred EEEEeEEEEcCCC----CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------------
Q 001446 182 IEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------------ 245 (1075)
Q Consensus 182 i~~~~v~~~~~~~----~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------------ 245 (1075)
|+++|+++.|+++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 7899999999753 259999999999999999999999999999999999999999999998642
Q ss_pred ------------------ccccccEEEEcCCC--CCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCCh-hHHhcC
Q 001446 246 ------------------SDLNKEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRY 304 (1075)
Q Consensus 246 ------------------~~~~~~i~~v~Q~~--~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~ 304 (1075)
..+++.||||||+| .++..||+|||.|+............+++.++++.++|. ++.++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~ 162 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQRS 162 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCC
Confidence 12356799999987 467779999999864322111112245678899999996 677776
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhH-hhCCe
Q 001446 305 PPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDV 380 (1075)
Q Consensus 305 ~~~~~~~~g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~-~~~d~ 380 (1075)
| .+||||||||++|||||+.+|+++||||||++||+.....+.+.+++ .|+|+|+||||++.+ ..||+
T Consensus 163 ~--------~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adr 234 (305)
T PRK13651 163 P--------FELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKR 234 (305)
T ss_pred h--------hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCE
Confidence 6 68999999999999999999999999999999999999998887754 489999999999876 67999
Q ss_pred EEEEcC
Q 001446 381 VLSLDG 386 (1075)
Q Consensus 381 i~~l~~ 386 (1075)
|++|++
T Consensus 235 v~vl~~ 240 (305)
T PRK13651 235 TIFFKD 240 (305)
T ss_pred EEEEEC
Confidence 999976
No 172
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.5e-38 Score=355.48 Aligned_cols=197 Identities=26% Similarity=0.402 Sum_probs=170.2
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc----cccccEEEEc
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVP 256 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~----~~~~~i~~v~ 256 (1075)
.|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..+++++|||
T Consensus 2 ~L~i~~l~~~~~-~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~v~ 80 (353)
T PRK10851 2 SIEIANIKKSFG-RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVF 80 (353)
T ss_pred EEEEEEEEEEeC-CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEEEe
Confidence 378999999996 46799999999999999999999999999999999999999999999999641 2346799999
Q ss_pred CCCCCCc-CCHHHHhcCCCCCC----cccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHc
Q 001446 257 QRPYTAV-GTLRDQLIYPLTSD----QEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 257 Q~~~~~~-~tv~~ni~~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~ 331 (1075)
|++.+++ .|++||+.|+.... ........+++.++++.++|.++.++.| .+||||||||++|||||+
T Consensus 81 Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~--------~~LSgGq~QRvalArAL~ 152 (353)
T PRK10851 81 QHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP--------AQLSGGQKQRVALARALA 152 (353)
T ss_pred cCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh--------hhCCHHHHHHHHHHHHHh
Confidence 9998876 59999999875421 1011122456788999999999888887 689999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
.+|+++||||||++||+.++..+.+.+++ .|+|+|+||||++.+ ..||+|++|++
T Consensus 153 ~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~ 212 (353)
T PRK10851 153 VEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQ 212 (353)
T ss_pred cCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999998887753 388999999999986 56999999986
No 173
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-38 Score=349.61 Aligned_cols=198 Identities=23% Similarity=0.288 Sum_probs=167.6
Q ss_pred cEEEEeEEEEcCCC----CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc----------
Q 001446 181 YIEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------- 246 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~----~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------- 246 (1075)
+|+++|+++.|+.+ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 1 mi~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 1 MIKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred CEEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 37899999999743 2599999999999999999999999999999999999999999999998641
Q ss_pred cccccEEEEcCCC--CCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCCh-hHHhcCCCCcccCCCCCCChhHHHH
Q 001446 247 DLNKEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQR 323 (1075)
Q Consensus 247 ~~~~~i~~v~Q~~--~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGqkqR 323 (1075)
.+++.++||+|+| .++..|+.||+.|+.............++.++++.++|. ++.++.| ..||||||||
T Consensus 81 ~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~--------~~LSgGqkqr 152 (288)
T PRK13643 81 PVRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKSP--------FELSGGQMRR 152 (288)
T ss_pred HHHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCCc--------ccCCHHHHHH
Confidence 2356799999998 677789999998864321111112234577889999995 4666655 6899999999
Q ss_pred HHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 324 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 324 l~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
++|||||+.+|+++||||||++||+.++..+.+.+++ .|+|+|++|||++.+ ..||+|++|++
T Consensus 153 vaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~ 219 (288)
T PRK13643 153 VAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEK 219 (288)
T ss_pred HHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999998887753 489999999999987 57999999986
No 174
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-38 Score=359.18 Aligned_cols=197 Identities=21% Similarity=0.339 Sum_probs=169.4
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc----cccccEEEEc
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVP 256 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~----~~~~~i~~v~ 256 (1075)
.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..+++|+|||
T Consensus 3 ~l~i~~l~~~~~-~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~v~ 81 (369)
T PRK11000 3 SVTLRNVTKAYG-DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGMVF 81 (369)
T ss_pred EEEEEEEEEEeC-CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEEEe
Confidence 489999999996 46799999999999999999999999999999999999999999999998641 2246799999
Q ss_pred CCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCC
Q 001446 257 QRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 335 (1075)
Q Consensus 257 Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~ 335 (1075)
|++.++. .|++||+.++............+++.++++.++|.++.++.| .+|||||||||+|||||+.+|+
T Consensus 82 Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~--------~~LSgGq~QRvaLAraL~~~P~ 153 (369)
T PRK11000 82 QSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKP--------KALSGGQRQRVAIGRTLVAEPS 153 (369)
T ss_pred CCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCCh--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 9998876 599999998753221111122356788999999998888877 6899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 336 FAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 336 illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
+|||||||++||+.+++.+.+.+++ .|+|+|+||||++.+ ..||++++|++
T Consensus 154 lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~ 209 (369)
T PRK11000 154 VFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDA 209 (369)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999988877653 389999999999876 57999999986
No 175
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-38 Score=346.49 Aligned_cols=202 Identities=22% Similarity=0.303 Sum_probs=173.2
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEc
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 915 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~Vp 915 (1075)
.|+++||+..|.+.. +|+|+||+|+.||.++|+|||||||||++++|.||.+|++|+|.|||.|+++++..+++|++|+
T Consensus 3 ~i~l~~v~K~yg~~~-~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iamVF 81 (338)
T COG3839 3 ELELKNVRKSFGSFE-VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAMVF 81 (338)
T ss_pred EEEEeeeEEEcCCce-eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEEEe
Confidence 589999999997655 9999999999999999999999999999999999999999999999999999976667799999
Q ss_pred CCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCC
Q 001446 916 QRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 994 (1075)
Q Consensus 916 QdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 994 (1075)
|++-||+- |+++||.||..... . .....+..+.++.+.++|.++.++.| .+||
T Consensus 82 Q~yALyPhmtV~~Niaf~Lk~~~----------~------~k~ei~~rV~eva~~L~l~~lL~r~P----------~~LS 135 (338)
T COG3839 82 QNYALYPHMTVYENIAFGLKLRG----------V------PKAEIDKRVKEVAKLLGLEHLLNRKP----------LQLS 135 (338)
T ss_pred CCccccCCCcHHHHhhhhhhhCC----------C------chHHHHHHHHHHHHHcCChhHHhcCc----------ccCC
Confidence 99999975 99999999864210 0 00012556777888899988888775 5689
Q ss_pred hhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHH----HhcCceEEEecCCC-CchhhccceEEEEcC
Q 001446 995 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLA----KDMGITFVTSSQRP-ALIPFHSLELRLIDG 1064 (1075)
Q Consensus 995 gGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~----~~~~~TvI~IaHRl-s~i~~~~~~l~l~~g 1064 (1075)
||||||+||||||+|+|++++||||.|+||......+...+ ++.+.|+|.|+|+. +.+...|++.++.+|
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G 210 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDG 210 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCC
Confidence 99999999999999999999999999999999876654433 33589999999999 588899999999645
No 176
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-38 Score=338.88 Aligned_cols=192 Identities=21% Similarity=0.309 Sum_probs=168.7
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-ccccccEEEEcCC
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-SDLNKEIFYVPQR 258 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-~~~~~~i~~v~Q~ 258 (1075)
..|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|++|+
T Consensus 11 ~~l~i~~l~~~~~-~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~~v~q~ 89 (257)
T PRK11247 11 TPLLLNAVSKRYG-ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTRLMFQD 89 (257)
T ss_pred CcEEEEEEEEEEC-CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceEEEecC
Confidence 4699999999996 4679999999999999999999999999999999999999999999998854 3446789999999
Q ss_pred CCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCEE
Q 001446 259 PYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFA 337 (1075)
Q Consensus 259 ~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~il 337 (1075)
+.++. .|++||+.++... ..++++.++++.+++.+..++.+ .+||||||||++|||||+.+|+++
T Consensus 90 ~~l~~~~tv~enl~~~~~~------~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgGqkqrl~laraL~~~p~ll 155 (257)
T PRK11247 90 ARLLPWKKVIDNVGLGLKG------QWRDAALQALAAVGLADRANEWP--------AALSGGQKQRVALARALIHRPGLL 155 (257)
T ss_pred ccCCCCCcHHHHHHhcccc------hHHHHHHHHHHHcCChhHhcCCh--------hhCCHHHHHHHHHHHHHhcCCCEE
Confidence 98776 6999999876321 12356778999999988877766 689999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 338 ILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 338 lLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
||||||++||+.+...+.+.+++ .++|+|++||+++.+ ..||++++|++
T Consensus 156 lLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~ 209 (257)
T PRK11247 156 LLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEE 209 (257)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999998887753 379999999999986 57999999986
No 177
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=4.3e-38 Score=341.33 Aligned_cols=197 Identities=24% Similarity=0.352 Sum_probs=167.3
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc---------cccccE
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNKEI 252 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~~~~i 252 (1075)
++++|+++.|+.++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.+
T Consensus 2 l~~~~l~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 81 (243)
T TIGR02315 2 LEVENLSKVYPNGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRRI 81 (243)
T ss_pred eEEEeeeeecCCCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhhe
Confidence 78999999996346799999999999999999999999999999999999999999999998641 135679
Q ss_pred EEEcCCCCCCc-CCHHHHhcCCCCCCc--------ccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHH
Q 001446 253 FYVPQRPYTAV-GTLRDQLIYPLTSDQ--------EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQR 323 (1075)
Q Consensus 253 ~~v~Q~~~~~~-~tv~~ni~~~~~~~~--------~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqR 323 (1075)
+|+||++.++. .|++||+.++..... .......+++.++++.+++.+..++.+ .+||||||||
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qr 153 (243)
T TIGR02315 82 GMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRA--------DQLSGGQQQR 153 (243)
T ss_pred EEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCc--------ccCCHHHHHH
Confidence 99999998776 599999987542110 001122356778899999988777765 6899999999
Q ss_pred HHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 324 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 324 l~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
++|||||+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ ..||++++|++
T Consensus 154 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 154 VAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKA 221 (243)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEEC
Confidence 9999999999999999999999999999998887754 378999999999987 57999999986
No 178
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-38 Score=337.02 Aligned_cols=196 Identities=23% Similarity=0.241 Sum_probs=166.4
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----ccccccEEEEc
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYVP 256 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v~ 256 (1075)
|+++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...+++++|+|
T Consensus 1 i~~~~~~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (220)
T cd03265 1 IEVENLVKKYG-DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGIVF 79 (220)
T ss_pred CEEEEEEEEEC-CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEEec
Confidence 46899999986 4679999999999999999999999999999999999999999999999854 12346799999
Q ss_pred CCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCC
Q 001446 257 QRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 335 (1075)
Q Consensus 257 Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~ 335 (1075)
|++.++. .|+++|+.++...........++++.++++.+++.+..++.+ .+||||||||++||||++.+|+
T Consensus 80 q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qr~~la~al~~~p~ 151 (220)
T cd03265 80 QDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRLV--------KTYSGGMRRRLEIARSLVHRPE 151 (220)
T ss_pred CCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 9998776 499999987532111111112346778999999988877766 6899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 336 FAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 336 illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 152 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~ 207 (220)
T cd03265 152 VLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDH 207 (220)
T ss_pred EEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 9999999999999999999887754 3889999999999875 6999999986
No 179
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-38 Score=350.50 Aligned_cols=206 Identities=23% Similarity=0.231 Sum_probs=168.8
Q ss_pred CCCccEEEEeEEEEcCC-CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCC-----CCccEEEeCCcCc----
Q 001446 177 SEANYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS---- 246 (1075)
Q Consensus 177 ~~~~~i~~~~v~~~~~~-~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~---- 246 (1075)
+..+.|+++|+++.|++ .+++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|.+.
T Consensus 76 ~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~ 155 (329)
T PRK14257 76 NHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKK 155 (329)
T ss_pred CcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 34568999999999963 4579999999999999999999999999999999999986 5799999999752
Q ss_pred ----cccccEEEEcCCCCCCcCCHHHHhcCCCCCCccc-CcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHH
Q 001446 247 ----DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQ 321 (1075)
Q Consensus 247 ----~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqk 321 (1075)
.+++.++||||+|+++++|++||+.|+....... .....+.+.++++.+++.+.++.. ..+.+.+||||||
T Consensus 156 ~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~~~----~~~~~~~LSgGqk 231 (329)
T PRK14257 156 ISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVKDD----LDKAGNALSGGQQ 231 (329)
T ss_pred cchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhhhh----hhCCcccCCHHHH
Confidence 3467899999999999999999999753221110 001112356778888875432211 1133579999999
Q ss_pred HHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhh-CCeEEEEcC
Q 001446 322 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAF-HDVVLSLDG 386 (1075)
Q Consensus 322 qRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~-~d~i~~l~~ 386 (1075)
||++||||++++|+|+||||||+|||+++...+.+.+++ .++|+|+|||+++.+.. ||+|++|++
T Consensus 232 qRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~ 299 (329)
T PRK14257 232 QRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQ 299 (329)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999998887764 37899999999999875 999999986
No 180
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.8e-38 Score=337.37 Aligned_cols=197 Identities=21% Similarity=0.248 Sum_probs=166.9
Q ss_pred EEEEeEEEEcCCC-CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----ccccccEEEE
Q 001446 182 IEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYV 255 (1075)
Q Consensus 182 i~~~~v~~~~~~~-~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v 255 (1075)
|+++|+++.|+++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..++++++|+
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~v 80 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGYC 80 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEEe
Confidence 4689999999643 679999999999999999999999999999999999999999999999864 1245679999
Q ss_pred cCCCCCC-cCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCC
Q 001446 256 PQRPYTA-VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 334 (1075)
Q Consensus 256 ~Q~~~~~-~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p 334 (1075)
+|++.++ ..|+++|+.++............+++.++++.+++.+..++.+ .+||||||||++|||||+.+|
T Consensus 81 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la~al~~~p 152 (220)
T cd03263 81 PQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKANKRA--------RTLSGGMKRKLSLAIALIGGP 152 (220)
T ss_pred cCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhChh--------hhCCHHHHHHHHHHHHHhcCC
Confidence 9999887 4699999987532111111112345778899999988777655 689999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 335 KFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 335 ~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .||+++++++
T Consensus 153 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 207 (220)
T cd03263 153 SVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSD 207 (220)
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEEC
Confidence 99999999999999999999988865 3689999999999885 6999999986
No 181
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=6.8e-38 Score=336.12 Aligned_cols=199 Identities=28% Similarity=0.357 Sum_probs=168.8
Q ss_pred ccEEEEeEEEEcCCC---CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc-c--------
Q 001446 180 NYIEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-D-------- 247 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~---~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~-~-------- 247 (1075)
..++++|+++.|+++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .
T Consensus 5 ~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 84 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAK 84 (228)
T ss_pred ceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHH
Confidence 368999999999653 3699999999999999999999999999999999999999999999998641 1
Q ss_pred c-cccEEEEcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHH
Q 001446 248 L-NKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLG 325 (1075)
Q Consensus 248 ~-~~~i~~v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~ 325 (1075)
. ++.++|+||+|.++. .|+.||+.++............+++.++++.+++.+..++.+ .+||||||||++
T Consensus 85 ~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~Ge~qrl~ 156 (228)
T PRK10584 85 LRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLP--------AQLSGGEQQRVA 156 (228)
T ss_pred HHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh--------hhCCHHHHHHHH
Confidence 1 247999999998876 499999986432111111122456788999999998888776 689999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 326 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 326 lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
|||||+.+|+++||||||++||+.+.+.+.+.+++ .|.|+|++||+++.+..+|+++++++
T Consensus 157 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~ 221 (228)
T PRK10584 157 LARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVN 221 (228)
T ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999887753 37899999999998888999999975
No 182
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=3.4e-38 Score=350.69 Aligned_cols=198 Identities=24% Similarity=0.294 Sum_probs=168.9
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----ccccccEEE
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFY 254 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~ 254 (1075)
..++++|+++.|+ +..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...+++|||
T Consensus 6 ~~i~i~~l~k~~~-~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~ig~ 84 (306)
T PRK13537 6 APIDFRNVEKRYG-DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRVGV 84 (306)
T ss_pred ceEEEEeEEEEEC-CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcEEE
Confidence 4699999999996 4679999999999999999999999999999999999999999999999965 134578999
Q ss_pred EcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCC
Q 001446 255 VPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHK 333 (1075)
Q Consensus 255 v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~ 333 (1075)
|||++.++. .|++||+.+..............++.++++.+++.+..++.+ .+||||||||++|||||+++
T Consensus 85 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~la~aL~~~ 156 (306)
T PRK13537 85 VPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKADAKV--------GELSGGMKRRLTLARALVND 156 (306)
T ss_pred EeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHhcCch--------hhCCHHHHHHHHHHHHHhCC
Confidence 999998775 699999986322111111112345678899999988777755 68999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 334 PKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 334 p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|+++||||||+|||+.+++.+.+.+++ .|+|+|++||+++.+. .||+|++|++
T Consensus 157 P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~ 213 (306)
T PRK13537 157 PDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEE 213 (306)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999887764 4899999999999885 6999999986
No 183
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-38 Score=356.68 Aligned_cols=198 Identities=23% Similarity=0.391 Sum_probs=171.0
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC----ccccccEEEE
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFYV 255 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~----~~~~~~i~~v 255 (1075)
..++++|+++.|+ +.++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.+ ...++.++||
T Consensus 18 ~~l~l~~v~~~~~-~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig~v 96 (377)
T PRK11607 18 PLLEIRNLTKSFD-GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPINMM 96 (377)
T ss_pred ceEEEEeEEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEEE
Confidence 4699999999985 4679999999999999999999999999999999999999999999999964 1235689999
Q ss_pred cCCCCCCcC-CHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCC
Q 001446 256 PQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 334 (1075)
Q Consensus 256 ~Q~~~~~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p 334 (1075)
||++.+|.. |+.||+.|+............+++.++++.+++.++.++.| .+|||||||||+|||||+.+|
T Consensus 97 fQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~--------~~LSgGq~QRVaLARAL~~~P 168 (377)
T PRK11607 97 FQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKP--------HQLSGGQRQRVALARSLAKRP 168 (377)
T ss_pred eCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHHHHHHHHhcCC
Confidence 999988864 99999998754321111222456788999999999988887 689999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHH----hcCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 335 KFAILDECTSAVTTDMEERFCAKVR----AMGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 335 ~illLDEpts~LD~~~~~~i~~~l~----~~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
++||||||||+||...+..+.+.++ +.|.|+|+||||.+.+ ..+|++++|++
T Consensus 169 ~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~ 225 (377)
T PRK11607 169 KLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNR 225 (377)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeC
Confidence 9999999999999999988876543 3589999999999985 57999999986
No 184
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.5e-38 Score=339.63 Aligned_cols=197 Identities=23% Similarity=0.354 Sum_probs=166.8
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc---------cccccE
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNKEI 252 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~~~~i 252 (1075)
++++|+++.|++++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.+
T Consensus 1 l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 80 (241)
T cd03256 1 IEVENLSKTYPNGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQI 80 (241)
T ss_pred CEEeeEEEecCCccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhcc
Confidence 46899999996436799999999999999999999999999999999999999999999998641 134679
Q ss_pred EEEcCCCCCCc-CCHHHHhcCCCCCC--------cccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHH
Q 001446 253 FYVPQRPYTAV-GTLRDQLIYPLTSD--------QEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQR 323 (1075)
Q Consensus 253 ~~v~Q~~~~~~-~tv~~ni~~~~~~~--------~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqR 323 (1075)
+|+||++.++. .|++||+.++.... ........+++.++++.+++.+..++.+ .+||||||||
T Consensus 81 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qr 152 (241)
T cd03256 81 GMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRA--------DQLSGGQQQR 152 (241)
T ss_pred EEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCc--------ccCCHHHHHH
Confidence 99999998766 69999998753211 0001122345778899999987777755 6899999999
Q ss_pred HHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 324 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 324 l~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
++|||||+.+|+++||||||++||+.++..+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 153 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~ 220 (241)
T cd03256 153 VAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKD 220 (241)
T ss_pred HHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999887754 3899999999999886 7999999986
No 185
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2.3e-38 Score=355.66 Aligned_cols=186 Identities=28% Similarity=0.330 Sum_probs=161.3
Q ss_pred CCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccc----cccEEEEcCCCCCC
Q 001446 193 TGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDL----NKEIFYVPQRPYTA 262 (1075)
Q Consensus 193 ~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~----~~~i~~v~Q~~~~~ 262 (1075)
+++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+ +++++||||+++++
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~ 83 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALF 83 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCC
Confidence 35679999999999999999999999999999999999999999999999964 122 56899999999998
Q ss_pred c-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeC
Q 001446 263 V-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDE 341 (1075)
Q Consensus 263 ~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~illLDE 341 (1075)
+ .||+||+.++............+++.++++.++|+.+.++.| .+|||||||||+|||||+.+|+++||||
T Consensus 84 ~~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p--------~~LSGGq~QRV~lARAL~~~p~iLLlDE 155 (363)
T TIGR01186 84 PHMTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYP--------DELSGGMQQRVGLARALAAEPDILLMDE 155 (363)
T ss_pred CCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCCh--------hhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 7 599999998643222111123456788999999999988887 6899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 342 CTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 342 pts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
|||+||+.++..+++.+.+ .++|+|+||||++.+ +.||+|++|++
T Consensus 156 P~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~ 205 (363)
T TIGR01186 156 AFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKA 205 (363)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 9999999999999887753 389999999999975 67999999976
No 186
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.1e-38 Score=347.05 Aligned_cols=198 Identities=28% Similarity=0.374 Sum_probs=169.9
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----ccccccEEEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYV 255 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v 255 (1075)
.++++|+++.|..++.+|+|+||+|++|++++++||||||||||+|+|+|++.|++|+|.++|.+ ...++++||+
T Consensus 4 ~i~~~~l~k~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~igy~ 83 (293)
T COG1131 4 VIEVRNLTKKYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRIGYV 83 (293)
T ss_pred eeeecceEEEeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhheEEE
Confidence 47889999999645789999999999999999999999999999999999999999999999965 2456789999
Q ss_pred cCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCC
Q 001446 256 PQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 334 (1075)
Q Consensus 256 ~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p 334 (1075)
||+|.++. .|++||+.|.............+++.++++.++|.+..++.. ..||+|||||++||+||+++|
T Consensus 84 ~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~~~~~--------~~lS~G~kqrl~ia~aL~~~P 155 (293)
T COG1131 84 PQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKANKKV--------RTLSGGMKQRLSIALALLHDP 155 (293)
T ss_pred ccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhhCcch--------hhcCHHHHHHHHHHHHHhcCC
Confidence 99998665 599999987543322111233567889999999998544433 689999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHh---cC-CeEEEEecChhhHhh-CCeEEEEcC
Q 001446 335 KFAILDECTSAVTTDMEERFCAKVRA---MG-TSCITISHRPALVAF-HDVVLSLDG 386 (1075)
Q Consensus 335 ~illLDEpts~LD~~~~~~i~~~l~~---~~-~t~i~vtH~~~~~~~-~d~i~~l~~ 386 (1075)
+++||||||+|||+.++..+.+.+++ .| +||+++||.++.+.. ||+|+++++
T Consensus 156 ~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~ 212 (293)
T COG1131 156 ELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILND 212 (293)
T ss_pred CEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeC
Confidence 99999999999999999999888764 35 799999999998864 999999986
No 187
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-38 Score=348.43 Aligned_cols=197 Identities=23% Similarity=0.284 Sum_probs=166.2
Q ss_pred EEEEeEEEEcCCC----CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc----------c
Q 001446 182 IEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------D 247 (1075)
Q Consensus 182 i~~~~v~~~~~~~----~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~----------~ 247 (1075)
++++|+++.|++. .++|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.+. .
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 7899999999642 4699999999999999999999999999999999999999999999999631 2
Q ss_pred ccccEEEEcCCC--CCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCCh-hHHhcCCCCcccCCCCCCChhHHHHH
Q 001446 248 LNKEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQRL 324 (1075)
Q Consensus 248 ~~~~i~~v~Q~~--~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGqkqRl 324 (1075)
.+++|+||||+| .++..|++||+.++............+++.++++.++|. +..++.| .+||||||||+
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~--------~~LSgGq~qrv 154 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELLARSP--------FELSGGQMRRV 154 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhhhCCc--------ccCCHHHHHHH
Confidence 346799999998 567789999998763221111111224577889999996 5566655 68999999999
Q ss_pred HHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 325 GMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 325 ~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
+|||||+.+|+++||||||++||+.+...+.+.+++ .|.|||++||+++.+ ..||+|++|++
T Consensus 155 ~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~ 221 (290)
T PRK13634 155 AIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHK 221 (290)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999998887753 389999999999987 57999999985
No 188
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-38 Score=346.34 Aligned_cols=199 Identities=22% Similarity=0.314 Sum_probs=169.8
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc--------ccccc
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------DLNKE 251 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~--------~~~~~ 251 (1075)
..++++|+++.|++++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.
T Consensus 4 ~~l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 4 YILKVEELNYNYSDGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred ceEEEEeEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 3699999999997557899999999999999999999999999999999999999999999999641 24567
Q ss_pred EEEEcCCC--CCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHH
Q 001446 252 IFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 329 (1075)
Q Consensus 252 i~~v~Q~~--~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAra 329 (1075)
++|+||+| .++..|++||+.++............+++.++++.++|.++.++.+ .+||||||||++||||
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~--------~~LS~G~~qrl~lara 155 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLKDKPT--------HCLSFGQKKRVAIAGV 155 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhhhCCc--------ccCCHHHHHHHHHHHH
Confidence 99999998 4677899999987532211111112345778899999988877765 6899999999999999
Q ss_pred HcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 330 FYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 330 l~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|+.+|+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 156 L~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~ 217 (283)
T PRK13636 156 LVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKE 217 (283)
T ss_pred HHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999988887753 3899999999999986 7999999986
No 189
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.7e-38 Score=332.89 Aligned_cols=196 Identities=26% Similarity=0.328 Sum_probs=166.4
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC--ccccccEEEEcCCC
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG--SDLNKEIFYVPQRP 259 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~--~~~~~~i~~v~Q~~ 259 (1075)
++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|+||++
T Consensus 1 l~~~~l~~~~~-~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~~q~~ 79 (210)
T cd03269 1 LEVENVTKRFG-RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPEER 79 (210)
T ss_pred CEEEEEEEEEC-CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEeccCC
Confidence 46899999986 4679999999999999999999999999999999999999999999999865 23456899999999
Q ss_pred CCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCEEE
Q 001446 260 YTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAI 338 (1075)
Q Consensus 260 ~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~ill 338 (1075)
.++. .|++||+.+.............+++.++++.+++.+..++.+ .+||||||||++||||++.+|+++|
T Consensus 80 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~la~al~~~p~~ll 151 (210)
T cd03269 80 GLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYANKRV--------EELSKGNQQKVQFIAAVIHDPELLI 151 (210)
T ss_pred cCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHHhCcH--------hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 8876 499999986432111111112345778899999988777755 6899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 339 LDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 339 LDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .||++++|++
T Consensus 152 lDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 203 (210)
T cd03269 152 LDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNK 203 (210)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeC
Confidence 9999999999999999888764 4789999999999874 6999999986
No 190
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.2e-38 Score=352.94 Aligned_cols=203 Identities=21% Similarity=0.251 Sum_probs=168.0
Q ss_pred eEEeeeeeeCCC---ccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc-----CCc
Q 001446 837 ISFSKLDIITPS---QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSG 908 (1075)
Q Consensus 837 I~f~~V~~~yp~---~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~-----~~r 908 (1075)
|+|+||+++|++ ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999999963 247999999999999999999999999999999999999999999999999997652 246
Q ss_pred CcEEEEcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc
Q 001446 909 CGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 987 (1075)
Q Consensus 909 ~~i~~VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 987 (1075)
.+|+||||++.+|+ .|+++|+.+|... .+.. ....++.+.++++.++|.+...+.
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~----------~~~~------~~~~~~~v~e~l~~vgL~~~~~~~-------- 137 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLEL----------DNTP------KDEIKRKVTELLALVGLGDKHDSY-------- 137 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHH----------cCCC------HHHHHHHHHHHHHHcCCchhhhCC--------
Confidence 68999999999995 7999999875310 0000 000123456778888886554332
Q ss_pred ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCch-hhccceEEEE
Q 001446 988 NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLI 1062 (1075)
Q Consensus 988 ~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i-~~~~~~l~l~ 1062 (1075)
...||||||||++|||||+.+|+|||||||||+||+++...+.+++++ .+.|+|+|+|+++.+ +++|+++.|.
T Consensus 138 --~~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~ 215 (343)
T TIGR02314 138 --PSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVIS 215 (343)
T ss_pred --hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 356999999999999999999999999999999999999887776643 389999999999876 7899999998
Q ss_pred cCC
Q 001446 1063 DGE 1065 (1075)
Q Consensus 1063 ~g~ 1065 (1075)
+|.
T Consensus 216 ~G~ 218 (343)
T TIGR02314 216 NGE 218 (343)
T ss_pred CCE
Confidence 775
No 191
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-38 Score=344.67 Aligned_cols=198 Identities=25% Similarity=0.328 Sum_probs=168.9
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc-------cccccEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIF 253 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~-------~~~~~i~ 253 (1075)
+++++|+++.|++++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.++
T Consensus 1 ml~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 1 MIRLENVSYSYPDGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred CEEEEEEEEEcCCCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 378999999996556799999999999999999999999999999999999999999999998641 2346799
Q ss_pred EEcCCCC--CCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHc
Q 001446 254 YVPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 254 ~v~Q~~~--~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~ 331 (1075)
|+||+|. ++..|++||+.++............+++.++++.+++.+..++.+ ..||||||||++|||||+
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~~qrv~laral~ 152 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHRSP--------KTLSGGQGQCVALAGILT 152 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCc--------ccCCHHHHHHHHHHHHHH
Confidence 9999985 456799999987532211111112345778899999998888766 689999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
.+|+++||||||++||+.++..+.+.+++ .|+|+|++||+++.+..||+++++++
T Consensus 153 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~ 210 (274)
T PRK13644 153 MEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDR 210 (274)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEEC
Confidence 99999999999999999999999887753 48999999999999988999999986
No 192
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-38 Score=344.53 Aligned_cols=198 Identities=27% Similarity=0.373 Sum_probs=170.5
Q ss_pred cEEEEeEEEEcCC-CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEE
Q 001446 181 YIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIF 253 (1075)
Q Consensus 181 ~i~~~~v~~~~~~-~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~ 253 (1075)
.++++||++.|++ .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.|+
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 5899999999964 4579999999999999999999999999999999999999999999999964 12356799
Q ss_pred EEcCCC--CCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHc
Q 001446 254 YVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 254 ~v~Q~~--~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~ 331 (1075)
|+||+| .++..|++||+.++............+++.++++.++|.++.++.| ..||||||||++|||||+
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~--------~~LS~G~~qrv~laral~ 156 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP--------HRLSGGQKQRVAIAGVLA 156 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc--------ccCCHHHHHHHHHHHHHH
Confidence 999998 4566799999987632211111112345788999999999888877 689999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
.+|+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+..||+++++++
T Consensus 157 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~ 215 (279)
T PRK13635 157 LQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNK 215 (279)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEEC
Confidence 99999999999999999999999888764 27999999999999888999999986
No 193
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-38 Score=316.19 Aligned_cols=212 Identities=21% Similarity=0.253 Sum_probs=169.2
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc-----cCCcCc
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-----AGSGCG 910 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~-----~~~r~~ 910 (1075)
.|+++||+..||++..+|+||||+|++||.|||+||||||||||++.|.|++||++|+|.++|.++... ..+|.+
T Consensus 3 ~i~~~nl~k~yp~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~~ 82 (258)
T COG3638 3 MIEVKNLSKTYPGGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRRD 82 (258)
T ss_pred eEEEeeeeeecCCCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHHh
Confidence 489999999999999999999999999999999999999999999999999999999999999999876 234678
Q ss_pred EEEEcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccccc
Q 001446 911 IFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNW 989 (1075)
Q Consensus 911 i~~VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~ 989 (1075)
+++|.|.|-|-+ -|+-+|+..+.-.....+.-+ .+. .+........++|+.+|+.+..-. .
T Consensus 83 iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~sl--fgl------fsk~dk~~Al~aLervgi~~~A~q----------r 144 (258)
T COG3638 83 IGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSL--FGL------FSKEDKAQALDALERVGILDKAYQ----------R 144 (258)
T ss_pred ceeEeccCCcccccHHHHHHHhhhcccchHHHHH--hCC------CCHHHHHHHHHHHHHcCcHHHHHH----------H
Confidence 999999999875 589999865421111111110 000 001112334567788877443221 2
Q ss_pred ccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHH----hcCceEEEecCCCC-chhhccceEEEEcC
Q 001446 990 EDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAK----DMGITFVTSSQRPA-LIPFHSLELRLIDG 1064 (1075)
Q Consensus 990 g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~----~~~~TvI~IaHRls-~i~~~~~~l~l~~g 1064 (1075)
.++|||||+||++|||||..+|+|++-|||||+||+.+-+.+.+.++ +.|.|+|+.-|.+. ..+|+++++-|.+|
T Consensus 145 a~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G 224 (258)
T COG3638 145 ASTLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAG 224 (258)
T ss_pred hccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCC
Confidence 45799999999999999999999999999999999999887766654 36999999999998 55799999999777
Q ss_pred C
Q 001446 1065 E 1065 (1075)
Q Consensus 1065 ~ 1065 (1075)
.
T Consensus 225 ~ 225 (258)
T COG3638 225 R 225 (258)
T ss_pred c
Confidence 5
No 194
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=7.2e-38 Score=330.92 Aligned_cols=192 Identities=22% Similarity=0.273 Sum_probs=167.2
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc----cccccEEEEcC
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVPQ 257 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~----~~~~~i~~v~Q 257 (1075)
++++|+++.|+ ++++|+|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|.+. ..++.++|+||
T Consensus 1 l~~~~l~~~~~-~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 79 (208)
T cd03268 1 LKTNDLTKTYG-KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGALIE 79 (208)
T ss_pred CEEEEEEEEEC-CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEecC
Confidence 46899999995 46899999999999999999999999999999999999999999999998641 23567999999
Q ss_pred CCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCE
Q 001446 258 RPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 336 (1075)
Q Consensus 258 ~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~i 336 (1075)
++.++. .|++||+.++..... ...+++.++++.+++.+..++.+ .+||||||||++||||++.+|++
T Consensus 80 ~~~~~~~~tv~e~l~~~~~~~~----~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la~al~~~p~l 147 (208)
T cd03268 80 APGFYPNLTARENLRLLARLLG----IRKKRIDEVLDVVGLKDSAKKKV--------KGFSLGMKQRLGIALALLGNPDL 147 (208)
T ss_pred CCccCccCcHHHHHHHHHHhcC----CcHHHHHHHHHHcCCHHHHhhhH--------hhCCHHHHHHHHHHHHHhcCCCE
Confidence 998764 699999987532111 13456788999999988877765 68999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 337 AILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 337 llLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
+||||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .+|++++|++
T Consensus 148 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~ 201 (208)
T cd03268 148 LILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINK 201 (208)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEEC
Confidence 999999999999999999887764 4899999999999885 6999999986
No 195
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3.4e-38 Score=335.52 Aligned_cols=203 Identities=25% Similarity=0.321 Sum_probs=165.3
Q ss_pred eEEeeeeeeCCCc-cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc-----CCcCc
Q 001446 837 ISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCG 910 (1075)
Q Consensus 837 I~f~~V~~~yp~~-~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~-----~~r~~ 910 (1075)
|+++||++.|++. +++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++...+ ..|.+
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 6899999999754 57999999999999999999999999999999999999999999999999886542 23567
Q ss_pred EEEEcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccccc
Q 001446 911 IFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNW 989 (1075)
Q Consensus 911 i~~VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~ 989 (1075)
++|+||+|.+|. .|+++|+.++... .+. .....++.+.++++.+++.+...+.
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~----------~~~------~~~~~~~~~~~~l~~~~l~~~~~~~---------- 135 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRI----------IGV------PPRDANERVSAALEKVGLEGKAHAL---------- 135 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHh----------cCC------CHHHHHHHHHHHHHHcCChhhhhCC----------
Confidence 999999999987 5999999754210 000 0001134466777888775544332
Q ss_pred ccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCchh-hccceEEEEcCC
Q 001446 990 EDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIP-FHSLELRLIDGE 1065 (1075)
Q Consensus 990 g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i~-~~~~~l~l~~g~ 1065 (1075)
...||||||||++|||||+++|+||||||||++||.++...+.+.+++ .++|+|+|+|+++.+. +.|+++.+.+|.
T Consensus 136 ~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~ 215 (216)
T TIGR00960 136 PMQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGR 215 (216)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCc
Confidence 246999999999999999999999999999999999999888776643 4899999999998764 789999997653
No 196
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.8e-38 Score=333.04 Aligned_cols=195 Identities=25% Similarity=0.324 Sum_probs=165.9
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc-----cccccEEEEc
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-----DLNKEIFYVP 256 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~-----~~~~~i~~v~ 256 (1075)
++++|+++.|+ ++++++|+||++++| +++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.++|+|
T Consensus 1 i~~~~~~~~~~-~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 78 (211)
T cd03264 1 LQLENLTKRYG-KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGYLP 78 (211)
T ss_pred CEEEEEEEEEC-CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEEec
Confidence 47899999985 457999999999999 9999999999999999999999999999999998641 2356799999
Q ss_pred CCCCCCcC-CHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCC
Q 001446 257 QRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 335 (1075)
Q Consensus 257 Q~~~~~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~ 335 (1075)
|+|.++.. |++||+.+.............+++.++++.+++.+..++.+ .+||||||||++|||||+.+|+
T Consensus 79 q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la~al~~~p~ 150 (211)
T cd03264 79 QEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAKKKI--------GSLSGGMRRRVGIAQALVGDPS 150 (211)
T ss_pred CCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHhCch--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 99988775 99999986432111111112345778899999988777765 6899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhc--CCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 336 FAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 336 illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
++||||||++||+.+.+.+.+.+++. +.|+|++||+++.+. .+|++++|++
T Consensus 151 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~ 204 (211)
T cd03264 151 ILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNK 204 (211)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999988653 689999999999885 6999999986
No 197
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-38 Score=346.82 Aligned_cols=197 Identities=20% Similarity=0.305 Sum_probs=166.7
Q ss_pred EEEEeEEEEcCCC----CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc----------c
Q 001446 182 IEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------D 247 (1075)
Q Consensus 182 i~~~~v~~~~~~~----~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~----------~ 247 (1075)
++++|+++.|+++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 7899999999642 4699999999999999999999999999999999999999999999998541 2
Q ss_pred ccccEEEEcCCC--CCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCCh-hHHhcCCCCcccCCCCCCChhHHHHH
Q 001446 248 LNKEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQRL 324 (1075)
Q Consensus 248 ~~~~i~~v~Q~~--~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGqkqRl 324 (1075)
++++|+||||+| .++..|+.||+.++............+++.++++.+||. +..++.+ .+||||||||+
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~--------~~LSgGq~qrv 154 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMSQSP--------FQMSGGQMRKI 154 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCc--------ccCCHHHHHHH
Confidence 456899999998 567779999998863221111111234567889999996 5666655 68999999999
Q ss_pred HHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 325 GMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 325 ~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
+|||||+.+|+++||||||++||+.+...+.+.+++ .|+|+|+|||+++.+ ..||++++|++
T Consensus 155 ~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~ 221 (286)
T PRK13646 155 AIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKE 221 (286)
T ss_pred HHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999887753 389999999999987 57999999986
No 198
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.1e-37 Score=354.47 Aligned_cols=198 Identities=23% Similarity=0.321 Sum_probs=171.2
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 254 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 254 (1075)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+|+|+|+++|++|+|.++|.+ .+++++++|
T Consensus 3 ~L~~~nls~~y~-~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig~ 81 (402)
T PRK09536 3 MIDVSDLSVEFG-DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVAS 81 (402)
T ss_pred eEEEeeEEEEEC-CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceEE
Confidence 589999999996 5789999999999999999999999999999999999999999999999964 234678999
Q ss_pred EcCCCCC-CcCCHHHHhcCCCCCCc-cc---CcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHH
Q 001446 255 VPQRPYT-AVGTLRDQLIYPLTSDQ-EV---EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 329 (1075)
Q Consensus 255 v~Q~~~~-~~~tv~~ni~~~~~~~~-~~---~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAra 329 (1075)
|+|++.+ +..|++||+.++..... .. .....+++.++++.+++.++.++.+ .+||||||||++||||
T Consensus 82 v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~--------~~LSgGerQRv~IArA 153 (402)
T PRK09536 82 VPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV--------TSLSGGERQRVLLARA 153 (402)
T ss_pred EccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHHHHHHH
Confidence 9999986 56799999988643210 00 1223456788999999998888765 6899999999999999
Q ss_pred HcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhH-hhCCeEEEEcCC
Q 001446 330 FYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDGE 387 (1075)
Q Consensus 330 l~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~-~~~d~i~~l~~~ 387 (1075)
|+++|++|||||||++||+.++..+++.+++ .|+|+|++||+++.+ +.||++++|+++
T Consensus 154 L~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G 215 (402)
T PRK09536 154 LAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADG 215 (402)
T ss_pred HHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999988887754 488999999999998 579999999863
No 199
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=8.2e-38 Score=333.98 Aligned_cols=208 Identities=26% Similarity=0.313 Sum_probs=178.3
Q ss_pred CceEEeeeeeeCCC-ccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcE
Q 001446 835 DSISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGI 911 (1075)
Q Consensus 835 g~I~f~~V~~~yp~-~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i 911 (1075)
|.|+++|+++.|++ .+++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++...+ ..+.++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 1 GDIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred CcEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 46899999999985 357999999999999999999999999999999999999999999999999887642 346679
Q ss_pred EEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccc
Q 001446 912 FYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWE 990 (1075)
Q Consensus 912 ~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g 990 (1075)
+|+||+|.+|++|+++||.+.... ...++.++++.+++.+.+..++.|+++.. .+.
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~-----------------------~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 137 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEY-----------------------SDEELWQALERVGLKEFVESLPGGLDTVVEEGG 137 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCC-----------------------CHHHHHHHHHHhCcHHHHHhcccccccccccCC
Confidence 999999999999999999742111 12334556677777777777778888875 366
Q ss_pred cCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 991 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 991 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
..||+|||||++|||||+++|+++||||||++||..+...+.+.+++ .+.|+|+++|+++.+...|+++.|.+|.
T Consensus 138 ~~LS~G~~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~ 214 (221)
T cd03244 138 ENLSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGR 214 (221)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCe
Confidence 88999999999999999999999999999999999999888877754 4789999999999888899999997654
No 200
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=9.3e-38 Score=336.58 Aligned_cols=196 Identities=26% Similarity=0.362 Sum_probs=165.8
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc-----cccccEEEEc
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-----DLNKEIFYVP 256 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~-----~~~~~i~~v~ 256 (1075)
++++|+++.|+ ++++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|+|
T Consensus 2 l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~~~ 80 (236)
T TIGR03864 2 LEVAGLSFAYG-ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGVVF 80 (236)
T ss_pred EEEEeeEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEEeC
Confidence 78999999996 46799999999999999999999999999999999999999999999998541 1235799999
Q ss_pred CCCCC-CcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCC
Q 001446 257 QRPYT-AVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 335 (1075)
Q Consensus 257 Q~~~~-~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~ 335 (1075)
|++.+ +..|+++|+.++............+++.++++.+++.+..++.+ .+||||||||++|||||+.+|+
T Consensus 81 q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~~qrl~laral~~~p~ 152 (236)
T TIGR03864 81 QQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAERADDKV--------RELNGGHRRRVEIARALLHRPA 152 (236)
T ss_pred CCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhcCCh--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 99977 45799999986532111111112345678899999987776655 6899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 336 FAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 336 illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
++||||||++||+.+.+.+.+.+++ .|.|+|++||+++.+..||++++|++
T Consensus 153 llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~ 207 (236)
T TIGR03864 153 LLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHR 207 (236)
T ss_pred EEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeC
Confidence 9999999999999999999887753 37899999999999888999999985
No 201
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-38 Score=343.16 Aligned_cols=199 Identities=26% Similarity=0.383 Sum_probs=169.8
Q ss_pred ccEEEEeEEEEcCC-CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccE
Q 001446 180 NYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEI 252 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~-~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i 252 (1075)
..++++|+++.|++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.+
T Consensus 6 ~~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 6 VMIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred eEEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 46999999999963 5679999999999999999999999999999999999999999999999864 1345679
Q ss_pred EEEcCCC--CCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHH
Q 001446 253 FYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 330 (1075)
Q Consensus 253 ~~v~Q~~--~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral 330 (1075)
+|+||+| .++..|++||+.++.............++.++++.+++.+..++.+ .+||||||||++|||||
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~laral 157 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKEP--------QNLSGGQKQRVAIASVL 157 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCc--------ccCCHHHHHHHHHHHHH
Confidence 9999998 4556799999987532211111112235678899999998888876 68999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---c-CCeEEEEecChhhHhhCCeEEEEcC
Q 001446 331 YHKPKFAILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 331 ~~~p~illLDEpts~LD~~~~~~i~~~l~~---~-~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
+.+|+++||||||++||+.+.+.+++.+++ . ++|+|++||+++.+..||++++|++
T Consensus 158 ~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~ 217 (271)
T PRK13632 158 ALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSE 217 (271)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEEC
Confidence 999999999999999999999999888764 2 4899999999998888999999986
No 202
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.7e-38 Score=336.50 Aligned_cols=197 Identities=29% Similarity=0.394 Sum_probs=167.4
Q ss_pred EEEEeEEEEcCCC---CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc---------ccc
Q 001446 182 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLN 249 (1075)
Q Consensus 182 i~~~~v~~~~~~~---~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~~ 249 (1075)
++++|+++.|++. .++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 7899999999643 2899999999999999999999999999999999999999999999998641 124
Q ss_pred ccEEEEcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHH
Q 001446 250 KEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMAR 328 (1075)
Q Consensus 250 ~~i~~v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAr 328 (1075)
+.++|+||+|.++. .|++||+.++............+++.++++.+++.+..++.+ .+||||||||++|||
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la~ 153 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAYP--------AQLSGGQKQRVGIAR 153 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcCh--------hhCCHHHHHHHHHHH
Confidence 67999999998886 599999987532111111112345778899999988877766 689999999999999
Q ss_pred HHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 329 LFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 329 al~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
||+.+|+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+. .+|++++|++
T Consensus 154 al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~ 216 (233)
T cd03258 154 ALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEK 216 (233)
T ss_pred HHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999887753 3889999999999875 6999999976
No 203
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.5e-37 Score=331.90 Aligned_cols=199 Identities=24% Similarity=0.377 Sum_probs=169.2
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc------cccccEE
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DLNKEIF 253 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~~~~~i~ 253 (1075)
..|+++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.+. ..++.++
T Consensus 6 ~~i~~~~l~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 6 PLLQLQNVGYLAG-DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred ceEEEeccEEeeC-CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 3699999999986 46799999999999999999999999999999999999999999999998531 2356799
Q ss_pred EEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCCh-hHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcC
Q 001446 254 YVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 332 (1075)
Q Consensus 254 ~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~ 332 (1075)
|+||++.++..|++||+.++...... ....+++.++++.+++. ...++.+ .+||||||||++|||||++
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~~--~~~~~~~~~~l~~~~l~~~~~~~~~--------~~LS~G~~qrv~laral~~ 154 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRNQ--QPDPAIFLDDLERFALPDTILTKNI--------AELSGGEKQRISLIRNLQF 154 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcCC--ChHHHHHHHHHHHcCCChHHhcCCc--------ccCCHHHHHHHHHHHHHhc
Confidence 99999998888999999874321111 11234567899999995 4556554 6899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHhhCCeEEEEcCCCc
Q 001446 333 KPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDGEGE 389 (1075)
Q Consensus 333 ~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~~~d~i~~l~~~g~ 389 (1075)
+|+++||||||++||+.+.+.+.+.+++ .|.|+|++||+++.+..||++++|+++++
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~ 215 (225)
T PRK10247 155 MPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAG 215 (225)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccc
Confidence 9999999999999999999998887754 37899999999999888999999976543
No 204
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=2.5e-37 Score=333.82 Aligned_cols=199 Identities=26% Similarity=0.415 Sum_probs=168.7
Q ss_pred EEEEeEEEEcCC-CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEE
Q 001446 182 IEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 254 (1075)
Q Consensus 182 i~~~~v~~~~~~-~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 254 (1075)
++++|+++.|++ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 468999999964 3579999999999999999999999999999999999999999999999864 123567999
Q ss_pred EcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcc---cCCCCCCChhHHHHHHHHHHHc
Q 001446 255 VPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKE---INWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 255 v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~---~~~g~~LSgGqkqRl~lAral~ 331 (1075)
+||+++++..|++||+.++... .....+.+.++..++.+.++.+|.+.. .....+|||||||||+||||++
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~------~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~ 154 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPG------MSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALI 154 (237)
T ss_pred EcCCchhccchHHHHhhccCCC------CCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHh
Confidence 9999998888999999875421 123345566677777777776653322 1245789999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
.+|+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+..||+++++++
T Consensus 155 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~ 211 (237)
T cd03252 155 HNPRILIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEK 211 (237)
T ss_pred hCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEEC
Confidence 99999999999999999999999988865 37899999999999988999999986
No 205
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=1e-37 Score=315.93 Aligned_cols=166 Identities=52% Similarity=0.955 Sum_probs=152.2
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEcC
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 916 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~VpQ 916 (1075)
|+++|++++|++.+++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.++|. .+++|+||
T Consensus 1 i~~~~~~~~~~~~~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~---------~~i~~~~q 71 (166)
T cd03223 1 IELENLSLATPDGRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG---------EDLLFLPQ 71 (166)
T ss_pred CEEEEEEEEcCCCCeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC---------ceEEEECC
Confidence 578999999976667999999999999999999999999999999999999999999999874 56999999
Q ss_pred CCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCChh
Q 001446 917 RPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSLG 996 (1075)
Q Consensus 917 dP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSgG 996 (1075)
+|.++++|+++|+.++. ...||+|
T Consensus 72 ~~~~~~~tv~~nl~~~~--------------------------------------------------------~~~LS~G 95 (166)
T cd03223 72 RPYLPLGTLREQLIYPW--------------------------------------------------------DDVLSGG 95 (166)
T ss_pred CCccccccHHHHhhccC--------------------------------------------------------CCCCCHH
Confidence 99999999999997420 1248999
Q ss_pred HHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHhcCceEEEecCCCCchhhccceEEEEcCCcce
Q 001446 997 EQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDGEGNW 1068 (1075)
Q Consensus 997 QrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~~~~TvI~IaHRls~i~~~~~~l~l~~g~g~~ 1068 (1075)
||||++||||++++|+++||||||++||.++...+.+.+++.++|+|+|+|+++...+.|+++.+ +++|.|
T Consensus 96 ~~~rv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~tiiivsh~~~~~~~~d~i~~l-~~~~~~ 166 (166)
T cd03223 96 EQQRLAFARLLLHKPKFVFLDEATSALDEESEDRLYQLLKELGITVISVGHRPSLWKFHDRVLDL-DGEGGW 166 (166)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCccccCHHHHHHHHHHHHHhCCEEEEEeCChhHHhhCCEEEEE-cCCCCC
Confidence 99999999999999999999999999999999999888876689999999999999999999999 788887
No 206
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=9.9e-38 Score=331.48 Aligned_cols=196 Identities=27% Similarity=0.358 Sum_probs=166.8
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc--------cccccEE
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------DLNKEIF 253 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~--------~~~~~i~ 253 (1075)
++++|+++.|++ +++++++||++++|++++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++
T Consensus 1 l~~~~l~~~~~~-~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 79 (213)
T cd03262 1 IEIKNLHKSFGD-FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKVG 79 (213)
T ss_pred CEEEEEEEEECC-eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcce
Confidence 468999999964 6799999999999999999999999999999999999999999999998531 2356799
Q ss_pred EEcCCCCCCc-CCHHHHhcCCCCC-CcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHc
Q 001446 254 YVPQRPYTAV-GTLRDQLIYPLTS-DQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 254 ~v~Q~~~~~~-~tv~~ni~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~ 331 (1075)
|+||+|.++. .|++||+.++... .........+++.++++.+++.+..++.+ .+||||||||++||||++
T Consensus 80 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la~al~ 151 (213)
T cd03262 80 MVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKADAYP--------AQLSGGQQQRVAIARALA 151 (213)
T ss_pred EEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhhCc--------cccCHHHHHHHHHHHHHh
Confidence 9999998876 6999999875321 11111112345678899999988888776 689999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 152 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~ 210 (213)
T cd03262 152 MNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDD 210 (213)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 99999999999999999999999888764 4789999999999885 6999999975
No 207
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-35 Score=358.60 Aligned_cols=189 Identities=21% Similarity=0.335 Sum_probs=149.2
Q ss_pred CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCC---CccEEEeCCcC-cc--ccccEEEEcCCCCC-CcCCHH
Q 001446 195 NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL---VSGHIAKPGVG-SD--LNKEIFYVPQRPYT-AVGTLR 267 (1075)
Q Consensus 195 ~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~---~~G~i~~~~~~-~~--~~~~i~~v~Q~~~~-~~~tv~ 267 (1075)
..+|+|++.-++||+.+.+.||.||||||||++|+|..+- ..|+|.++|.+ ++ -++.++|++|+... +..|||
T Consensus 128 ~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVr 207 (1391)
T KOG0065|consen 128 IQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVR 207 (1391)
T ss_pred ceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEe
Confidence 4799999999999999999999999999999999998753 35799999976 11 25679999998754 556999
Q ss_pred HHhcCCCCCCcc---cCcCCHHH-----HHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCEEEE
Q 001446 268 DQLIYPLTSDQE---VEPLTHGG-----MVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAIL 339 (1075)
Q Consensus 268 ~ni~~~~~~~~~---~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~illL 339 (1075)
|-+.|....... ..+.++.+ .+.+++.+||++..+....+ +. ....|||||+||++|-+++.+|+++++
T Consensus 208 eTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGn-d~--~RGvSGGerKRvsi~E~~v~~~~~~~~ 284 (1391)
T KOG0065|consen 208 ETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGN-DM--VRGVSGGERKRVSIGEMLVGPASILFW 284 (1391)
T ss_pred ehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecc-cc--cccccCcccceeeeeeeeecCcceeee
Confidence 999875432211 11122222 34678899998877765422 22 246999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChh--hHhhCCeEEEEcC
Q 001446 340 DECTSAVTTDMEERFCAKVRA----MGTSCITISHRPA--LVAFHDVVLSLDG 386 (1075)
Q Consensus 340 DEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~--~~~~~d~i~~l~~ 386 (1075)
||+|.|||..+.-++.+.+++ .+.|.++.-|+.. .....|.|++|.+
T Consensus 285 De~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~e 337 (1391)
T KOG0065|consen 285 DEITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSE 337 (1391)
T ss_pred ecccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeec
Confidence 999999999999999998875 3778888888654 4567899999976
No 208
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.1e-37 Score=334.31 Aligned_cols=198 Identities=24% Similarity=0.293 Sum_probs=165.9
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCC-----CCCccEEEeCCcCc--------cc
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLW-----PLVSGHIAKPGVGS--------DL 248 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~-----~~~~G~i~~~~~~~--------~~ 248 (1075)
|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|.+. .+
T Consensus 1 i~~~~l~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (227)
T cd03260 1 IELRDLNVYYG-DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLEL 79 (227)
T ss_pred CEEEEEEEEcC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHHH
Confidence 46899999996 457999999999999999999999999999999999999 99999999998641 13
Q ss_pred cccEEEEcCCCCCCcCCHHHHhcCCCCCCcccC-cCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHH
Q 001446 249 NKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVE-PLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 327 (1075)
Q Consensus 249 ~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lA 327 (1075)
+++++|+||++.++..|++||+.++........ ...++++.++++.+++.+..++.+. ..+||||||||++||
T Consensus 80 ~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~------~~~LSgG~~qrv~la 153 (227)
T cd03260 80 RRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH------ALGLSGGQQQRLCLA 153 (227)
T ss_pred HhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC------cccCCHHHHHHHHHH
Confidence 467999999998887799999987543211111 0123567788999999877665420 168999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 328 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 328 ral~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|||+.+|+++||||||++||+.++..+.+.+++. .+|+|++||+++.+. .||++++|++
T Consensus 154 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 215 (227)
T cd03260 154 RALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLN 215 (227)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeC
Confidence 9999999999999999999999999999888652 379999999999865 7999999986
No 209
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.2e-38 Score=302.08 Aligned_cols=205 Identities=21% Similarity=0.246 Sum_probs=174.3
Q ss_pred cEEEEeEEEEcCC-CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-ccccccEEEEcCC
Q 001446 181 YIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-SDLNKEIFYVPQR 258 (1075)
Q Consensus 181 ~i~~~~v~~~~~~-~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-~~~~~~i~~v~Q~ 258 (1075)
.+.+++++.+|++ .+.+|+|+|++|.+||.++++|||||||||||++++|+.+|..|+|.++|.. ..-...=|.|+|+
T Consensus 3 ~l~~~~~sl~y~g~~~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~~G~i~l~~r~i~gPgaergvVFQ~ 82 (259)
T COG4525 3 MLNVSHLSLSYEGKPRSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPSRGSIQLNGRRIEGPGAERGVVFQN 82 (259)
T ss_pred eeehhheEEecCCcchhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcccceEEECCEeccCCCccceeEecc
Confidence 3567788888864 2359999999999999999999999999999999999999999999999853 1112346999999
Q ss_pred CCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCEE
Q 001446 259 PYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFA 337 (1075)
Q Consensus 259 ~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~il 337 (1075)
+-+++ .++.||+.|+.......+....+...+.+..+||.+.-++++ -+||||||||+.|||||..+|++|
T Consensus 83 ~~LlPWl~~~dNvafgL~l~Gi~k~~R~~~a~q~l~~VgL~~~~~~~i--------~qLSGGmrQRvGiARALa~eP~~L 154 (259)
T COG4525 83 EALLPWLNVIDNVAFGLQLRGIEKAQRREIAHQMLALVGLEGAEHKYI--------WQLSGGMRQRVGIARALAVEPQLL 154 (259)
T ss_pred CccchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCcccccccce--------EeecchHHHHHHHHHHhhcCcceE
Confidence 97655 699999999987665544445566788999999999888776 589999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHH----hcCCeEEEEecChhhHh-hCCeEEEEcCCCcEEEe
Q 001446 338 ILDECTSAVTTDMEERFCAKVR----AMGTSCITISHRPALVA-FHDVVLSLDGEGEWRVH 393 (1075)
Q Consensus 338 lLDEpts~LD~~~~~~i~~~l~----~~~~t~i~vtH~~~~~~-~~d~i~~l~~~g~~~~~ 393 (1075)
+||||+++||.-+++++.+.|- +.|+.+++|||+.+..- .++++++|++..+.+++
T Consensus 155 lLDEPfgAlDa~tRe~mQelLldlw~~tgk~~lliTH~ieEAlflatrLvvlsp~pgRvv~ 215 (259)
T COG4525 155 LLDEPFGALDALTREQMQELLLDLWQETGKQVLLITHDIEEALFLATRLVVLSPGPGRVVE 215 (259)
T ss_pred eecCchhhHHHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHhhhheeEEecCCCceeeE
Confidence 9999999999999999888764 45999999999998764 68999999986665554
No 210
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-38 Score=317.19 Aligned_cols=199 Identities=24% Similarity=0.276 Sum_probs=169.3
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEEEE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFYV 914 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~~V 914 (1075)
|+|+||++.|. ...+++|+||+|++||.+.++|||||||||+++.+.|+++|++|+|.|||.||++++ .+|.+|+||
T Consensus 2 I~~~nvsk~y~-~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGYv 80 (309)
T COG1125 2 IEFENVSKRYG-NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGYV 80 (309)
T ss_pred ceeeeeehhcC-CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhhh
Confidence 79999999986 567999999999999999999999999999999999999999999999999999985 478889999
Q ss_pred cCCCCCCC-cchhhhhcC-CCC-h-HHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchh--hhhhhccCCccccc
Q 001446 915 PQRPYTCL-GTLRDQIIY-PLS-R-EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSY--LLEREEVGWDANLN 988 (1075)
Q Consensus 915 pQdP~Lf~-gTir~NL~~-p~~-~-~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~--~i~~~~~Gldt~~~ 988 (1075)
-|.--||+ -||.+||.. |.- . +.+ ..+..+.+.++.++|.. +..+-
T Consensus 81 iQqigLFPh~Tv~eNIa~VP~L~~w~k~-------------------~i~~r~~ELl~lvgL~p~~~~~Ry--------- 132 (309)
T COG1125 81 IQQIGLFPHLTVAENIATVPKLLGWDKE-------------------RIKKRADELLDLVGLDPSEYADRY--------- 132 (309)
T ss_pred hhhcccCCCccHHHHHHhhhhhcCCCHH-------------------HHHHHHHHHHHHhCCCHHHHhhcC---------
Confidence 99999996 699999975 321 0 111 11345667778888743 33333
Q ss_pred cccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHH----hcCceEEEecCCCC-chhhccceEEEEc
Q 001446 989 WEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAK----DMGITFVTSSQRPA-LIPFHSLELRLID 1063 (1075)
Q Consensus 989 ~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~----~~~~TvI~IaHRls-~i~~~~~~l~l~~ 1063 (1075)
...|||||+||+.+||||..+|+||++|||-||||+-+...+|+.+. +.++|+|.|+|..+ .++..|++.+|.+
T Consensus 133 -P~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~ 211 (309)
T COG1125 133 -PHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDA 211 (309)
T ss_pred -chhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecC
Confidence 46799999999999999999999999999999999999888887553 35999999999995 8999999999965
Q ss_pred CC
Q 001446 1064 GE 1065 (1075)
Q Consensus 1064 g~ 1065 (1075)
|+
T Consensus 212 G~ 213 (309)
T COG1125 212 GE 213 (309)
T ss_pred Ce
Confidence 54
No 211
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-37 Score=332.15 Aligned_cols=201 Identities=27% Similarity=0.426 Sum_probs=172.2
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 254 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 254 (1075)
.++++|+++.|++++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|
T Consensus 2 ~l~~~~l~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 81 (229)
T cd03254 2 EIEFENVNFSYDEKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMIGV 81 (229)
T ss_pred eEEEEEEEEecCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhEEE
Confidence 48899999999754579999999999999999999999999999999999999999999999854 124567999
Q ss_pred EcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcc---cCCCCCCChhHHHHHHHHHHHc
Q 001446 255 VPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKE---INWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 255 v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~---~~~g~~LSgGqkqRl~lAral~ 331 (1075)
+||+++++..|++||+.++... ....++.++++.+++.++.+++|.+.. .....+||||||||++|||||+
T Consensus 82 ~~q~~~~~~~tv~~~~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~ 155 (229)
T cd03254 82 VLQDTFLFSGTIMENIRLGRPN------ATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAML 155 (229)
T ss_pred ecCCchhhhhHHHHHHhccCCC------CCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHh
Confidence 9999998888999999876431 123456677888888888877653322 1235789999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcCC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGE 387 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~ 387 (1075)
.+|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+..||++++|+++
T Consensus 156 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g 213 (229)
T cd03254 156 RDPKILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDG 213 (229)
T ss_pred cCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCC
Confidence 99999999999999999999999888765 378999999999998889999999863
No 212
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.2e-37 Score=323.86 Aligned_cols=191 Identities=28% Similarity=0.441 Sum_probs=165.3
Q ss_pred EEEEeEEEEcCCC----CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCccccccEEEEcC
Q 001446 182 IEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQ 257 (1075)
Q Consensus 182 i~~~~v~~~~~~~----~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q 257 (1075)
++++||++.|++. +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| +|+|+||
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------~i~~~~q 73 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------SIAYVSQ 73 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------EEEEEec
Confidence 4689999999754 3799999999999999999999999999999999999999999999987 6999999
Q ss_pred CCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcc---cCCCCCCChhHHHHHHHHHHHcCCC
Q 001446 258 RPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKE---INWGDELSLGEQQRLGMARLFYHKP 334 (1075)
Q Consensus 258 ~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~---~~~g~~LSgGqkqRl~lAral~~~p 334 (1075)
+|.+++.|++||+.++... ..++..++++.+++.+.++..|.+.. .....+||||||||++||||++.+|
T Consensus 74 ~~~l~~~t~~enl~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 74 EPWIQNGTIRENILFGKPF-------DEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred CchhccCcHHHHhccCCCc-------CHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 9999999999999986432 23345677888888888877664322 2345789999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHH-HH---hcCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 335 KFAILDECTSAVTTDMEERFCAK-VR---AMGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 335 ~illLDEpts~LD~~~~~~i~~~-l~---~~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
+++||||||++||+...+.+.+. ++ +.+.|+|++||+++.+..+|++++|++
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~ 202 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDN 202 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeC
Confidence 99999999999999999888774 33 247899999999999888999999975
No 213
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1e-37 Score=340.09 Aligned_cols=209 Identities=23% Similarity=0.255 Sum_probs=178.3
Q ss_pred CCceEEeeeeeeCCCc-cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCc
Q 001446 834 QDSISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCG 910 (1075)
Q Consensus 834 ~g~I~f~~V~~~yp~~-~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~ 910 (1075)
.|.|+++|++++|++. .++|+|+||+|+|||.+||+|+||||||||+++|.|+++|.+|+|.+||.++...+ ..|.+
T Consensus 17 ~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~~ 96 (257)
T cd03288 17 GGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSR 96 (257)
T ss_pred CceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhhh
Confidence 6789999999999763 57999999999999999999999999999999999999999999999999987653 34667
Q ss_pred EEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-cc
Q 001446 911 IFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NW 989 (1075)
Q Consensus 911 i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~ 989 (1075)
++|+||+|.+|++|+++|+.+.... .++.+.++++.+++...++..|.|+++.. .+
T Consensus 97 i~~v~q~~~l~~~tv~~nl~~~~~~-----------------------~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~ 153 (257)
T cd03288 97 LSIILQDPILFSGSIRFNLDPECKC-----------------------TDDRLWEALEIAQLKNMVKSLPGGLDAVVTEG 153 (257)
T ss_pred EEEECCCCcccccHHHHhcCcCCCC-----------------------CHHHHHHHHHHhCcHHHHhhcccccCcEeccC
Confidence 9999999999999999999732110 12233445556666667777777888865 45
Q ss_pred ccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 990 EDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 990 g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
+..||+|||||++||||++++|++|||||||++||+++...+.+.+++ .++|+|+++|+++.+...|+++.|.+|.
T Consensus 154 ~~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~ 231 (257)
T cd03288 154 GENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGI 231 (257)
T ss_pred CCcCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCE
Confidence 678999999999999999999999999999999999999888777654 4899999999999888899999997654
No 214
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=7.3e-38 Score=337.93 Aligned_cols=196 Identities=28% Similarity=0.407 Sum_probs=165.5
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc------c-ccccEEE
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D-LNKEIFY 254 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~-~~~~i~~ 254 (1075)
++++|+++.|+ ++++|+++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .+..++|
T Consensus 1 l~~~~l~~~~~-~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (236)
T cd03219 1 LEVRGLTKRFG-GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIGR 79 (236)
T ss_pred CeeeeeEEEEC-CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEEE
Confidence 46899999996 46799999999999999999999999999999999999999999999998641 1 2356999
Q ss_pred EcCCCCCCcC-CHHHHhcCCCCCCccc----------CcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHH
Q 001446 255 VPQRPYTAVG-TLRDQLIYPLTSDQEV----------EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQR 323 (1075)
Q Consensus 255 v~Q~~~~~~~-tv~~ni~~~~~~~~~~----------~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqR 323 (1075)
+||++.++.. |++||+.++....... .....+++.++++.+++.+..++.+ .+||||||||
T Consensus 80 v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qr 151 (236)
T cd03219 80 TFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPA--------GELSYGQQRR 151 (236)
T ss_pred EecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCCh--------hhCCHHHHHH
Confidence 9999988775 9999998754221100 0112345678899999987777655 6899999999
Q ss_pred HHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 324 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 324 l~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
++|||||+.+|+++||||||++||+.++..+.+.+++ .|+|+|++||+++.+. .||+++++++
T Consensus 152 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~ 218 (236)
T cd03219 152 LEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQ 218 (236)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeC
Confidence 9999999999999999999999999999999888754 5789999999999885 6999999986
No 215
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=3.6e-37 Score=329.02 Aligned_cols=199 Identities=31% Similarity=0.444 Sum_probs=173.5
Q ss_pred cEEEEeEEEEcCCC-CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEE
Q 001446 181 YIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIF 253 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~-~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~ 253 (1075)
.++++|+++.|+++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++
T Consensus 2 ~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (221)
T cd03244 2 DIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRIS 81 (221)
T ss_pred cEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhEE
Confidence 47899999999753 579999999999999999999999999999999999999999999999864 13456899
Q ss_pred EEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCChhHHHHHHHHHHH
Q 001446 254 YVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLF 330 (1075)
Q Consensus 254 ~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkqRl~lAral 330 (1075)
|+||+|.++..|++||+.+... ....++.++++.+++.+..+++|.+... .+...||||||||++|||||
T Consensus 82 ~~~q~~~l~~~tv~enl~~~~~-------~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral 154 (221)
T cd03244 82 IIPQDPVLFSGTIRSNLDPFGE-------YSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARAL 154 (221)
T ss_pred EECCCCccccchHHHHhCcCCC-------CCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHH
Confidence 9999999988999999975321 2345677888999999888876654332 35679999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 331 YHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 331 ~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
+.+|+++||||||++||+.+++.+.+.+++ .+.|+|++||+++.+..||++++|++
T Consensus 155 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~ 212 (221)
T cd03244 155 LRKSKILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDK 212 (221)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEEC
Confidence 999999999999999999999999998875 37899999999999988999999986
No 216
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1e-37 Score=347.66 Aligned_cols=197 Identities=25% Similarity=0.282 Sum_probs=166.6
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----ccccccEEEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYV 255 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v 255 (1075)
.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...+++++|+
T Consensus 4 ~i~~~~l~~~~~-~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~v 82 (303)
T TIGR01288 4 AIDLVGVSKSYG-DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAIGVV 82 (303)
T ss_pred EEEEEeEEEEeC-CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcEEEE
Confidence 589999999996 4679999999999999999999999999999999999999999999999864 1235689999
Q ss_pred cCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCC
Q 001446 256 PQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 334 (1075)
Q Consensus 256 ~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p 334 (1075)
||++.++. .|++||+.+.............+++.++++.+++.+..++.+ .+||||||||++|||||+.+|
T Consensus 83 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~--------~~LSgG~~qrv~la~al~~~p 154 (303)
T TIGR01288 83 PQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADVRV--------ALLSGGMKRRLTLARALINDP 154 (303)
T ss_pred eccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCch--------hhCCHHHHHHHHHHHHHhcCC
Confidence 99998775 699999975321111101111234667888999988777765 689999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 335 KFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 335 ~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
+++||||||++||+.++..+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 155 ~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~ 210 (303)
T TIGR01288 155 QLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLES 210 (303)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999888764 4899999999999885 6999999986
No 217
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=4.8e-38 Score=334.99 Aligned_cols=203 Identities=25% Similarity=0.312 Sum_probs=165.5
Q ss_pred eEEeeeeeeCCCc---cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc------CC
Q 001446 837 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA------GS 907 (1075)
Q Consensus 837 I~f~~V~~~yp~~---~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~------~~ 907 (1075)
|+++||++.|++. .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++...+ ..
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 5789999999753 57999999999999999999999999999999999999999999999999887643 13
Q ss_pred cCcEEEEcCCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccc
Q 001446 908 GCGIFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 986 (1075)
Q Consensus 908 r~~i~~VpQdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~ 986 (1075)
+.+++|+||+|.+|.+ |+++|+.++.... +. .....++.+.++++.++|.+.....
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~------- 137 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLA----------GV------PKKERRERAEELLERVGLGDRLNHY------- 137 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhc----------CC------CHHHHHHHHHHHHHHcCCchhhhcC-------
Confidence 4579999999999986 9999997632100 00 0000123456677777775443322
Q ss_pred cccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCchhhccceEEEE
Q 001446 987 LNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRLI 1062 (1075)
Q Consensus 987 ~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i~~~~~~l~l~ 1062 (1075)
...||||||||++||||++++|++|||||||++||+++...+.+.+++ .++|+|+|+|+++.+.+.|+++.|.
T Consensus 138 ---~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~ 214 (218)
T cd03255 138 ---PSELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELR 214 (218)
T ss_pred ---hhhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEee
Confidence 346999999999999999999999999999999999999888776643 3899999999999888999999997
Q ss_pred cCC
Q 001446 1063 DGE 1065 (1075)
Q Consensus 1063 ~g~ 1065 (1075)
+|.
T Consensus 215 ~G~ 217 (218)
T cd03255 215 DGK 217 (218)
T ss_pred CCc
Confidence 663
No 218
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-37 Score=337.21 Aligned_cols=198 Identities=27% Similarity=0.378 Sum_probs=166.0
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEEE
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYV 255 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v 255 (1075)
++++|+++.|++.+++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|+
T Consensus 1 l~~~~l~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (242)
T cd03295 1 IEFENVTKRYGGGKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGYV 80 (242)
T ss_pred CEEEEEEEEeCCcceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEEE
Confidence 4689999999643679999999999999999999999999999999999999999999999864 1235679999
Q ss_pred cCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChh--HHhcCCCCcccCCCCCCChhHHHHHHHHHHHcC
Q 001446 256 PQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEY--LLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 332 (1075)
Q Consensus 256 ~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~ 332 (1075)
||+|.++. .|++||+.++............+++.++++.+++.. ..++.+ .+||||||||++|||||+.
T Consensus 81 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~--------~~LS~G~~qrv~laral~~ 152 (242)
T cd03295 81 IQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFADRYP--------HELSGGQQQRVGVARALAA 152 (242)
T ss_pred ccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHhcCh--------hhCCHHHHHHHHHHHHHhc
Confidence 99998875 699999987532211111112345778899999985 666655 6899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcCC
Q 001446 333 KPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 387 (1075)
Q Consensus 333 ~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~~ 387 (1075)
+|+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+ ..+|++++|+++
T Consensus 153 ~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G 212 (242)
T cd03295 153 DPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNG 212 (242)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999887764 389999999999976 579999999863
No 219
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-37 Score=333.37 Aligned_cols=194 Identities=29% Similarity=0.366 Sum_probs=167.7
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 254 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 254 (1075)
.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|
T Consensus 3 ~l~~~~l~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~ 81 (241)
T PRK14250 3 EIEFKEVSYSSF-GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIGM 81 (241)
T ss_pred eEEEEeEEEEeC-CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEEE
Confidence 488999999986 4679999999999999999999999999999999999999999999999864 123567999
Q ss_pred EcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCCh-hHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCC
Q 001446 255 VPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHK 333 (1075)
Q Consensus 255 v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~ 333 (1075)
+||+|.++..|++||+.++..... ....++.++++.+++. +..++.+ .+||||||||++||||++.+
T Consensus 82 ~~q~~~~~~~tv~e~l~~~~~~~~----~~~~~~~~~l~~~~l~~~~~~~~~--------~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 82 VFQQPHLFEGTVKDNIEYGPMLKG----EKNVDVEYYLSIVGLNKEYATRDV--------KNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EecCchhchhhHHHHHhcchhhcC----cHHHHHHHHHHHcCCCHHHhhCCc--------ccCCHHHHHHHHHHHHHhcC
Confidence 999999888899999987543211 1234677889999996 5666655 68999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcCC
Q 001446 334 PKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGE 387 (1075)
Q Consensus 334 p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~~ 387 (1075)
|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .||++++|+++
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G 208 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKG 208 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCC
Confidence 999999999999999999998887754 3899999999999875 69999999863
No 220
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.1e-37 Score=326.09 Aligned_cols=194 Identities=25% Similarity=0.356 Sum_probs=162.7
Q ss_pred eEEeeeeeeCCCc----cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEE
Q 001446 837 ISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIF 912 (1075)
Q Consensus 837 I~f~~V~~~yp~~----~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~ 912 (1075)
|+++||++.|++. +++|+|+||+|++||.++|+||+|||||||+++|.|+++|++|+|.+|| +++
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-----------~i~ 69 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-----------SIA 69 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-----------EEE
Confidence 5799999999764 4799999999999999999999999999999999999999999999998 499
Q ss_pred EEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-cccc
Q 001446 913 YVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWED 991 (1075)
Q Consensus 913 ~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~ 991 (1075)
|+||+|.+|++|+++|+.++.... ++...++++.+++.+.+...|.|+++.. ....
T Consensus 70 ~~~q~~~l~~~t~~enl~~~~~~~-----------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 126 (204)
T cd03250 70 YVSQEPWIQNGTIRENILFGKPFD-----------------------EERYEKVIKACALEPDLEILPDGDLTEIGEKGI 126 (204)
T ss_pred EEecCchhccCcHHHHhccCCCcC-----------------------HHHHHHHHHHcCcHHHHHhccCcccceecCCCC
Confidence 999999999999999998753211 1122334445555555666667777754 3457
Q ss_pred CCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHH-HHH---hcCceEEEecCCCCchhhccceEEEEcC
Q 001446 992 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYR-LAK---DMGITFVTSSQRPALIPFHSLELRLIDG 1064 (1075)
Q Consensus 992 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~-~~~---~~~~TvI~IaHRls~i~~~~~~l~l~~g 1064 (1075)
.||+|||||++||||++.+|+++||||||++||.++.+.+.+ +++ ..+.|+|+|+|+++.+...|+++.|.+|
T Consensus 127 ~lS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G 203 (204)
T cd03250 127 NLSGGQKQRISLARAVYSDADIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNG 203 (204)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCC
Confidence 799999999999999999999999999999999998776654 333 2479999999999988889999999766
No 221
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-37 Score=327.82 Aligned_cols=194 Identities=23% Similarity=0.328 Sum_probs=164.2
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC----ccccccEEEEcC
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFYVPQ 257 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~----~~~~~~i~~v~Q 257 (1075)
++++|+++.|++ +. .|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|+||
T Consensus 1 i~~~~l~~~~~~-~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 77 (211)
T cd03298 1 VRLDKIRFSYGE-QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSMLFQ 77 (211)
T ss_pred CEEEeEEEEeCC-Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEEec
Confidence 468999999863 33 39999999999999999999999999999999999999999999864 112457999999
Q ss_pred CCCCCcC-CHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCE
Q 001446 258 RPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 336 (1075)
Q Consensus 258 ~~~~~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~i 336 (1075)
+|.++.. |++||+.++...........++++.++++.+++.+..++.| .+||||||||++||||++.+|++
T Consensus 78 ~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~ia~al~~~p~l 149 (211)
T cd03298 78 ENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP--------GELSGGERQRVALARVLVRDKPV 149 (211)
T ss_pred ccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc--------ccCCHHHHHHHHHHHHHhcCCCE
Confidence 9988765 99999987643111111123456788999999998888876 68999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 337 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 337 llLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
+||||||++||+.++..+.+.+++ .++|+|++||+++.+. .||++++|++
T Consensus 150 lllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 204 (211)
T cd03298 150 LLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDN 204 (211)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEEC
Confidence 999999999999999999887753 3889999999999885 6999999986
No 222
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.2e-37 Score=335.30 Aligned_cols=196 Identities=22% Similarity=0.287 Sum_probs=165.0
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc------c-ccccEEE
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D-LNKEIFY 254 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~-~~~~i~~ 254 (1075)
++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .++.++|
T Consensus 1 l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (232)
T cd03218 1 LRAENLSKRYG-KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIGY 79 (232)
T ss_pred CeEEEEEEEeC-CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEEE
Confidence 46899999996 46799999999999999999999999999999999999999999999998641 1 2356999
Q ss_pred EcCCCCCCcC-CHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCC
Q 001446 255 VPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHK 333 (1075)
Q Consensus 255 v~Q~~~~~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~ 333 (1075)
+||++.++.. |++||+.++.............++.++++.+++.+..++.+ .+||||||||++|||||+.+
T Consensus 80 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~la~al~~~ 151 (232)
T cd03218 80 LPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHLRKSKA--------SSLSGGERRRVEIARALATN 151 (232)
T ss_pred ecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh--------hhCCHHHHHHHHHHHHHhcC
Confidence 9999988775 99999987532111111112345678899999988777765 68999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 334 PKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 334 p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+ ..||++++|++
T Consensus 152 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 208 (232)
T cd03218 152 PKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYE 208 (232)
T ss_pred CCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999998887754 488999999999765 57999999986
No 223
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=4.4e-37 Score=328.11 Aligned_cols=200 Identities=31% Similarity=0.504 Sum_probs=171.7
Q ss_pred cEEEEeEEEEcCCC-CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc------cccccEE
Q 001446 181 YIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DLNKEIF 253 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~-~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~~~~~i~ 253 (1075)
.++++|+++.|++. +++++|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|.+. ..++.++
T Consensus 2 ~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (220)
T cd03245 2 RIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNIG 81 (220)
T ss_pred eEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhEE
Confidence 47899999999643 5799999999999999999999999999999999999999999999998641 2345799
Q ss_pred EEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCChhHHHHHHHHHHH
Q 001446 254 YVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLF 330 (1075)
Q Consensus 254 ~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkqRl~lAral 330 (1075)
|+||+++++..|++||+.++... ....++.++++.+++.+..++.|.+..+ ....+||||||||++||||+
T Consensus 82 ~~~q~~~~~~~tv~e~l~~~~~~------~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al 155 (220)
T cd03245 82 YVPQDVTLFYGTLRDNITLGAPL------ADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARAL 155 (220)
T ss_pred EeCCCCccccchHHHHhhcCCCC------CCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHH
Confidence 99999998888999999875321 1244567888999999888877643221 23468999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CCeEEEEecChhhHhhCCeEEEEcC
Q 001446 331 YHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 331 ~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
+.+|+++||||||++||+.+...+.+.+++. ++|+|++||+++.+..||+++++++
T Consensus 156 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~ 213 (220)
T cd03245 156 LNDPPILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDS 213 (220)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeC
Confidence 9999999999999999999999999988753 4799999999998889999999986
No 224
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.4e-37 Score=348.82 Aligned_cols=198 Identities=25% Similarity=0.296 Sum_probs=168.3
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----ccccccEEE
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFY 254 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~ 254 (1075)
..|+++|+++.|+ ++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|
T Consensus 40 ~~i~i~nl~k~y~-~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ig~ 118 (340)
T PRK13536 40 VAIDLAGVSKSYG-DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARARIGV 118 (340)
T ss_pred eeEEEEEEEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhccEEE
Confidence 4699999999996 4679999999999999999999999999999999999999999999999964 134578999
Q ss_pred EcCCCCCC-cCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCC
Q 001446 255 VPQRPYTA-VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHK 333 (1075)
Q Consensus 255 v~Q~~~~~-~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~ 333 (1075)
+||++.++ ..|++||+.+.............+++.++++.++|.+..++.+ .+||||||||++|||||+++
T Consensus 119 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~--------~~LS~G~kqrv~lA~aL~~~ 190 (340)
T PRK13536 119 VPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADARV--------SDLSGGMKRRLTLARALIND 190 (340)
T ss_pred EeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhCCCh--------hhCCHHHHHHHHHHHHHhcC
Confidence 99999876 4699999975321111111112344667889999988777765 68999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 334 PKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 334 p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|+++||||||+|||+.++..+.+.+++ .|+|+|++||+++.+. .||+|++|++
T Consensus 191 P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~ 247 (340)
T PRK13536 191 PQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEA 247 (340)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999988765 4899999999999885 7999999986
No 225
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.2e-37 Score=336.24 Aligned_cols=207 Identities=19% Similarity=0.263 Sum_probs=169.9
Q ss_pred eEEeeeeeeCCC-ccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEEE
Q 001446 837 ISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFY 913 (1075)
Q Consensus 837 I~f~~V~~~yp~-~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~~ 913 (1075)
|+++||++.|++ ..++|+|+||+|++||.++|+|+||||||||+++|.|+++|.+|+|.++|.++...+ ..|.+++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 578999999975 467999999999999999999999999999999999999999999999999887542 34567999
Q ss_pred EcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccC
Q 001446 914 VPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDI 992 (1075)
Q Consensus 914 VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~ 992 (1075)
+||+|.+|+.|+++||.++..... ...+.+.++..++.++++..|.|+++.. ....+
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~~----------------------~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~ 138 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGMS----------------------MERVIEAAKLAGAHDFISELPEGYDTIVGEQGAG 138 (237)
T ss_pred EcCCchhccchHHHHhhccCCCCC----------------------HHHHHHHHHHcCcHHHHHhCcccccchhhcCCCc
Confidence 999999999999999986432100 1112223334444555555556666543 24578
Q ss_pred CChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 993 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 993 LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
||||||||++||||++++|++|||||||++||..+...+.+.+++ .++|+|+++|+++.+...|+++.|.+|.
T Consensus 139 LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~ 213 (237)
T cd03252 139 LSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGR 213 (237)
T ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999888877654 4899999999999888899999997664
No 226
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-37 Score=341.31 Aligned_cols=198 Identities=25% Similarity=0.332 Sum_probs=168.6
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 254 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 254 (1075)
.++++|+++.|++++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|
T Consensus 3 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (277)
T PRK13652 3 LIETRDLCYSYSGSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVGL 82 (277)
T ss_pred eEEEEEEEEEeCCCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheEE
Confidence 48899999999755679999999999999999999999999999999999999999999999864 123467999
Q ss_pred EcCCCC--CCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcC
Q 001446 255 VPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 332 (1075)
Q Consensus 255 v~Q~~~--~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~ 332 (1075)
+||+|. ++..|+.||+.++............+++.++++.+++.+..++.+ ..||||||||++|||||+.
T Consensus 83 v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~Gq~qrl~laraL~~ 154 (277)
T PRK13652 83 VFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVP--------HHLSGGEKKRVAIAGVIAM 154 (277)
T ss_pred EecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCc--------ccCCHHHHHHHHHHHHHHc
Confidence 999983 566799999987532111111112345678999999998888876 6899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 333 KPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 333 ~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
+|+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+ ..||++++|++
T Consensus 155 ~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~ 213 (277)
T PRK13652 155 EPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDK 213 (277)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999998887753 389999999999988 57999999986
No 227
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-38 Score=348.82 Aligned_cols=202 Identities=19% Similarity=0.213 Sum_probs=164.8
Q ss_pred CceEEeeeeeeCCCc----cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc------
Q 001446 835 DSISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE------ 904 (1075)
Q Consensus 835 g~I~f~~V~~~yp~~----~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~------ 904 (1075)
..|+++||+|.|++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 358999999999742 4699999999999999999999999999999999999999999999999887542
Q ss_pred ------------cCCcCcEEEEcCCC--CCCCcchhhhhcCCCC---hHHHHHHHhhhcCCCcccccccccchHHHHHHH
Q 001446 905 ------------AGSGCGIFYVPQRP--YTCLGTLRDQIIYPLS---REEAELRALKLHGKGEKLVDTTNILDSYLKTIL 967 (1075)
Q Consensus 905 ------------~~~r~~i~~VpQdP--~Lf~gTir~NL~~p~~---~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l 967 (1075)
..+|.+++||+|+| .+|++|+++||.++.. .+.+. ....+.+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~-------------------~~~~~~~~l 160 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSE-------------------AKKLAKFYL 160 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHH-------------------HHHHHHHHH
Confidence 13466799999999 7999999999986421 01100 012334566
Q ss_pred HhCCch-hhhhhhccCCccccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEE
Q 001446 968 EGVRLS-YLLEREEVGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFV 1043 (1075)
Q Consensus 968 ~~~~L~-~~i~~~~~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI 1043 (1075)
+.++|. .... ....+||||||||+||||||+++|+|||||||||+||..+...+.+.+++ .++|+|
T Consensus 161 ~~~gL~~~~~~----------~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~Tii 230 (320)
T PRK13631 161 NKMGLDDSYLE----------RSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVF 230 (320)
T ss_pred HHcCCChhHhc----------CCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEE
Confidence 666663 2221 12467999999999999999999999999999999999999888777643 589999
Q ss_pred EecCCCCch-hhccceEEEEcCC
Q 001446 1044 TSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 1044 ~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
+|+|+++.+ ++.|++++|.+|.
T Consensus 231 ivtHd~~~~~~~adri~vl~~G~ 253 (320)
T PRK13631 231 VITHTMEHVLEVADEVIVMDKGK 253 (320)
T ss_pred EEecCHHHHHHhCCEEEEEECCE
Confidence 999999865 7899999997765
No 228
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=5.2e-38 Score=294.69 Aligned_cols=185 Identities=27% Similarity=0.408 Sum_probs=161.2
Q ss_pred CCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEEEcCCCCCCcCCH
Q 001446 193 TGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTL 266 (1075)
Q Consensus 193 ~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v~Q~~~~~~~tv 266 (1075)
++.++|+++||++.+||+++|+||||||||||+|+++-+.+|++|++++.|++ ..+|.+|+||.|.|.+|.+||
T Consensus 14 ~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLfg~tV 93 (223)
T COG4619 14 GDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALFGDTV 93 (223)
T ss_pred CCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCccccccch
Confidence 45789999999999999999999999999999999999999999999999975 346889999999999999999
Q ss_pred HHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCC
Q 001446 267 RDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAV 346 (1075)
Q Consensus 267 ~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~illLDEpts~L 346 (1075)
.||+.||...... ..+.....+.++++++.+..-..+ ..+||||||||+||+|-|.--|+||+||||||+|
T Consensus 94 eDNlifP~~~r~r--r~dr~aa~~llar~~l~~~~L~k~-------it~lSGGE~QriAliR~Lq~~P~ILLLDE~TsAL 164 (223)
T COG4619 94 EDNLIFPWQIRNR--RPDRAAALDLLARFALPDSILTKN-------ITELSGGEKQRIALIRNLQFMPKILLLDEITSAL 164 (223)
T ss_pred hhccccchHHhcc--CCChHHHHHHHHHcCCchhhhcch-------hhhccchHHHHHHHHHHhhcCCceEEecCchhhc
Confidence 9999998654332 346667788999999976543322 2689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHH----HhcCCeEEEEecChhh-HhhCCeEEEEcC
Q 001446 347 TTDMEERFCAKV----RAMGTSCITISHRPAL-VAFHDVVLSLDG 386 (1075)
Q Consensus 347 D~~~~~~i~~~l----~~~~~t~i~vtH~~~~-~~~~d~i~~l~~ 386 (1075)
|+.+.+.+-+.+ ++.+..++.||||.+. ++++|+++.+..
T Consensus 165 D~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~ 209 (223)
T COG4619 165 DESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQP 209 (223)
T ss_pred ChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEecc
Confidence 999988765544 5678999999999987 789999998865
No 229
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2.6e-37 Score=332.04 Aligned_cols=197 Identities=31% Similarity=0.428 Sum_probs=161.6
Q ss_pred EEEEeEEEEcCCC---CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc---------ccc
Q 001446 182 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLN 249 (1075)
Q Consensus 182 i~~~~v~~~~~~~---~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~~ 249 (1075)
++++||++.|++. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .++
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 7899999999643 2799999999999999999999999999999999999999999999998641 234
Q ss_pred ccEEEEcCCCC--CC-cCCHHHHhcCCCCCCcccC-cCCHHH-HHHHHHHcCCh-hHHhcCCCCcccCCCCCCChhHHHH
Q 001446 250 KEIFYVPQRPY--TA-VGTLRDQLIYPLTSDQEVE-PLTHGG-MVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQR 323 (1075)
Q Consensus 250 ~~i~~v~Q~~~--~~-~~tv~~ni~~~~~~~~~~~-~~~~~~-~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGqkqR 323 (1075)
+.++|+||+|. ++ ..|+++|+.++........ ...... ..++++.+++. ...++.+ .+||||||||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--------~~LS~G~~qr 153 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPEEVLNRYP--------HELSGGQRQR 153 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCChhHhhCCc--------hhcCHHHHHH
Confidence 67999999993 43 4699999976422111000 011112 24678888885 5666655 6899999999
Q ss_pred HHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---c-CCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 324 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 324 l~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~---~-~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
++|||||+.+|+++||||||++||+.+++.+.+.+++ . |+|+|++||+++.+. .||++++|++
T Consensus 154 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 221 (228)
T cd03257 154 VAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYA 221 (228)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeC
Confidence 9999999999999999999999999999999888754 2 789999999999886 7999999986
No 230
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-37 Score=343.22 Aligned_cols=198 Identities=26% Similarity=0.352 Sum_probs=166.2
Q ss_pred cEEEEeEEEEcCCC----CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc----------
Q 001446 181 YIEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------- 246 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~----~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------- 246 (1075)
.++++|+++.|+++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 37899999999632 4699999999999999999999999999999999999999999999999641
Q ss_pred cccccEEEEcCCC--CCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCCh-hHHhcCCCCcccCCCCCCChhHHHH
Q 001446 247 DLNKEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQR 323 (1075)
Q Consensus 247 ~~~~~i~~v~Q~~--~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGqkqR 323 (1075)
..++.++|+||+| .++..|++||+.++............+++.++++.++|. ++.++.+ .+||||||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~--------~~LSgGq~qr 153 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLISKSP--------FELSGGQMRR 153 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhhCCc--------ccCCHHHHHH
Confidence 1245799999998 466689999998753211111111234567889999997 5667665 6899999999
Q ss_pred HHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 324 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 324 l~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
++|||||+.+|++|||||||++||+.+...+.+.+++ .|+|+|++||+++.+ ..||++++|++
T Consensus 154 l~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~ 220 (287)
T PRK13641 154 VAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEH 220 (287)
T ss_pred HHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999998887764 489999999999987 57999999986
No 231
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-37 Score=326.78 Aligned_cols=201 Identities=27% Similarity=0.355 Sum_probs=171.8
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcc---ccCCcCcEE
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDE---EAGSGCGIF 912 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~---~~~~r~~i~ 912 (1075)
.|+++|++|+|+++.++|+|+||+|++||.++|+|+||||||||+++|.|++.|++|.|.+||.+++. ...+|++++
T Consensus 3 ~i~~~~l~~~y~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~vG 82 (235)
T COG1122 3 MIEAENLSFRYPGRKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKVG 82 (235)
T ss_pred eEEEEEEEEEcCCCceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcceE
Confidence 47899999999887889999999999999999999999999999999999999999999999999873 356788899
Q ss_pred EEcCCC--CCCCcchhhhhcCCCCh---HHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc
Q 001446 913 YVPQRP--YTCLGTLRDQIIYPLSR---EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 987 (1075)
Q Consensus 913 ~VpQdP--~Lf~gTir~NL~~p~~~---~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 987 (1075)
+|.|+| .+|..||.+.+.|+... ..++ .+..+.++++.+++.++.++.
T Consensus 83 ~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e-------------------~~~rv~~~l~~vgl~~~~~r~-------- 135 (235)
T COG1122 83 LVFQNPDDQLFGPTVEDEVAFGLENLGLPREE-------------------IEERVAEALELVGLEELLDRP-------- 135 (235)
T ss_pred EEEECcccccccCcHHHHHhhchhhcCCCHHH-------------------HHHHHHHHHHHcCchhhccCC--------
Confidence 999999 79999999999984321 1111 134566788888886654443
Q ss_pred ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCC-chhhccceEEEE
Q 001446 988 NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPA-LIPFHSLELRLI 1062 (1075)
Q Consensus 988 ~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls-~i~~~~~~l~l~ 1062 (1075)
..+||||||||+|||.+|..+|+|||||||||+||....+.+.+.+++ .+.|+|+|+|++. ...+.|+++++.
T Consensus 136 --p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 136 --PFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred --ccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 356999999999999999999999999999999999998877766543 3689999999997 556799999998
Q ss_pred cCC
Q 001446 1063 DGE 1065 (1075)
Q Consensus 1063 ~g~ 1065 (1075)
+|.
T Consensus 214 ~G~ 216 (235)
T COG1122 214 DGK 216 (235)
T ss_pred CCE
Confidence 875
No 232
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.2e-38 Score=331.43 Aligned_cols=202 Identities=25% Similarity=0.313 Sum_probs=164.4
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEcC
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 916 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~VpQ 916 (1075)
|+++||++.|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++...+..+.+++||||
T Consensus 1 l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v~q 79 (213)
T cd03259 1 LELKGLSKTYGS-VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMVFQ 79 (213)
T ss_pred CeeeeeEEEeCC-eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEEcC
Confidence 578999999965 5799999999999999999999999999999999999999999999999998765444567999999
Q ss_pred CCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCCh
Q 001446 917 RPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 995 (1075)
Q Consensus 917 dP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 995 (1075)
+|.+|. .|+++|+.++.... +. .....++.+.++++.+++.+..... ...|||
T Consensus 80 ~~~~~~~~tv~~~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LSg 133 (213)
T cd03259 80 DYALFPHLTVAENIAFGLKLR----------GV------PKAEIRARVRELLELVGLEGLLNRY----------PHELSG 133 (213)
T ss_pred chhhccCCcHHHHHHhHHHHc----------CC------CHHHHHHHHHHHHHHcCChhhhhcC----------hhhCCH
Confidence 999886 59999997532100 00 0000123456677777775443322 246999
Q ss_pred hHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCc-hhhccceEEEEcCC
Q 001446 996 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPAL-IPFHSLELRLIDGE 1065 (1075)
Q Consensus 996 GQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~-i~~~~~~l~l~~g~ 1065 (1075)
|||||++|||||+++|++|||||||++||.++...+.+.+++ .++|+|+|+|+++. .++.|+++.|.+|.
T Consensus 134 G~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~ 208 (213)
T cd03259 134 GQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGR 208 (213)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCE
Confidence 999999999999999999999999999999999888776643 38999999999985 57899999997664
No 233
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-37 Score=340.74 Aligned_cols=198 Identities=22% Similarity=0.303 Sum_probs=169.9
Q ss_pred cEEEEeEEEEcCC-----CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc-------cc
Q 001446 181 YIEFSGVKVVTPT-----GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DL 248 (1075)
Q Consensus 181 ~i~~~~v~~~~~~-----~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~-------~~ 248 (1075)
.++++|+++.|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 6899999999974 25799999999999999999999999999999999999999999999998541 23
Q ss_pred cccEEEEcCCCC--CCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHH
Q 001446 249 NKEIFYVPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 326 (1075)
Q Consensus 249 ~~~i~~v~Q~~~--~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~l 326 (1075)
++.++|+||+|. ++..|+.+|+.++...........++++.++++.++|.++.++.+ .+||||||||++|
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~--------~~LS~G~~qrv~l 155 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP--------HLLSGGQKQRVAI 155 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc--------ccCCHHHHHHHHH
Confidence 567999999984 555689999988643211111122356778999999999888877 6899999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 327 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 327 Aral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
||||+.+|+++||||||++||+.++..+.+.+++ .|.|+|++||+++.+..||++++|++
T Consensus 156 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~ 219 (280)
T PRK13633 156 AGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDS 219 (280)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEEC
Confidence 9999999999999999999999999999887753 38999999999999888999999986
No 234
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=7.3e-38 Score=341.94 Aligned_cols=201 Identities=23% Similarity=0.332 Sum_probs=175.3
Q ss_pred CceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEE
Q 001446 835 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYV 914 (1075)
Q Consensus 835 g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~V 914 (1075)
..|+|+||+..|. +..+|+|+||+|++||.+.+.|||||||||++++|.||..|++|+|.+||.||..+...+++|++|
T Consensus 4 ~~l~i~~v~k~yg-~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig~V 82 (352)
T COG3842 4 PALEIRNVSKSFG-DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIGMV 82 (352)
T ss_pred ceEEEEeeeeecC-CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhccccee
Confidence 4699999999997 678999999999999999999999999999999999999999999999999999997777789999
Q ss_pred cCCCCCCC-cchhhhhcCCCCh----HHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccccc
Q 001446 915 PQRPYTCL-GTLRDQIIYPLSR----EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNW 989 (1075)
Q Consensus 915 pQdP~Lf~-gTir~NL~~p~~~----~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~ 989 (1075)
+|+.-||+ -||++|+.||... .+++ .+..+.++|+.++|.++-.+.
T Consensus 83 FQ~YALFPHltV~~NVafGLk~~~~~~~~~-------------------i~~rv~e~L~lV~L~~~~~R~---------- 133 (352)
T COG3842 83 FQSYALFPHMTVEENVAFGLKVRKKLKKAE-------------------IKARVEEALELVGLEGFADRK---------- 133 (352)
T ss_pred ecCcccCCCCcHHHHhhhhhhhcCCCCHHH-------------------HHHHHHHHHHHcCchhhhhhC----------
Confidence 99999997 6999999998751 1111 134567888899987766554
Q ss_pred ccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHH----HhcCceEEEecCCC-CchhhccceEEEEcC
Q 001446 990 EDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLA----KDMGITFVTSSQRP-ALIPFHSLELRLIDG 1064 (1075)
Q Consensus 990 g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~----~~~~~TvI~IaHRl-s~i~~~~~~l~l~~g 1064 (1075)
..+||||||||+||||||..+|++|+||||-||||......++..+ ++.|.|.|.|+|.- +-+...|++.+|.+|
T Consensus 134 p~qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G 213 (352)
T COG3842 134 PHQLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDG 213 (352)
T ss_pred hhhhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCC
Confidence 3569999999999999999999999999999999999877666544 34699999999999 588999999999777
Q ss_pred C
Q 001446 1065 E 1065 (1075)
Q Consensus 1065 ~ 1065 (1075)
.
T Consensus 214 ~ 214 (352)
T COG3842 214 R 214 (352)
T ss_pred c
Confidence 5
No 235
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-37 Score=333.48 Aligned_cols=209 Identities=23% Similarity=0.329 Sum_probs=175.2
Q ss_pred CceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEE
Q 001446 835 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIF 912 (1075)
Q Consensus 835 g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~ 912 (1075)
|.|+++|+++.|++.+++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++...+ ..|.+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (229)
T cd03254 1 GEIEFENVNFSYDEKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMIG 80 (229)
T ss_pred CeEEEEEEEEecCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhEE
Confidence 46899999999976567999999999999999999999999999999999999999999999999887642 3466799
Q ss_pred EEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-cccc
Q 001446 913 YVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWED 991 (1075)
Q Consensus 913 ~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~ 991 (1075)
|+||+|.+|.+|+++|+.++.... .+..+.++++.+++....+..|.|+++.. ....
T Consensus 81 ~~~q~~~~~~~tv~~~~~~~~~~~----------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 138 (229)
T cd03254 81 VVLQDTFLFSGTIMENIRLGRPNA----------------------TDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGG 138 (229)
T ss_pred EecCCchhhhhHHHHHHhccCCCC----------------------CHHHHHHHHHHhChHHHHHhCcccccCHhhcCCC
Confidence 999999999999999998642210 11223344555566666666666777654 3456
Q ss_pred CCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 992 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 992 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
.||+|||||++|||||+++|++|||||||++||..+...+.+.++. .++|+|+|+|.++.+...|+++.|.+|.
T Consensus 139 ~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~ 214 (229)
T cd03254 139 NLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGK 214 (229)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCe
Confidence 8999999999999999999999999999999999999888777644 4799999999999888899999997776
No 236
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=2.4e-37 Score=330.16 Aligned_cols=209 Identities=26% Similarity=0.362 Sum_probs=176.2
Q ss_pred CceEEeeeeeeCCCc-cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcE
Q 001446 835 DSISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGI 911 (1075)
Q Consensus 835 g~I~f~~V~~~yp~~-~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i 911 (1075)
|+|+++|+++.|++. .++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|.++|.++...+ ..+.++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 1 GRIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred CeEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 468999999999753 57999999999999999999999999999999999999999999999999876542 235679
Q ss_pred EEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccc
Q 001446 912 FYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWE 990 (1075)
Q Consensus 912 ~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g 990 (1075)
+|+||+|.+|..|+++|+.++.... ....+.++++.+++.+..+..|.|+++.. ...
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~----------------------~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 138 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLA----------------------DDERILRAAELAGVTDFVNKHPNGLDLQIGERG 138 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCC----------------------CHHHHHHHHHHcCcHHHHHhccccccceecCCC
Confidence 9999999999999999997642110 11233455666777777777778888765 345
Q ss_pred cCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 991 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 991 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
..||||||||++||||++.+|++|||||||++||.++...+.+.+++ .++|+|+|+|+++...+.|+++.+.+|.
T Consensus 139 ~~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~ 215 (220)
T cd03245 139 RGLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGR 215 (220)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCe
Confidence 68999999999999999999999999999999999999988887754 2589999999999889999999997653
No 237
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.2e-37 Score=328.28 Aligned_cols=196 Identities=22% Similarity=0.309 Sum_probs=161.6
Q ss_pred EEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEcCC
Q 001446 838 SFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQR 917 (1075)
Q Consensus 838 ~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~VpQd 917 (1075)
+++||+++|++..++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++.. ...+.+++|+||+
T Consensus 1 ~~~~l~~~~~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~i~~~~q~ 79 (205)
T cd03226 1 RIENISFSYKKGTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA-KERRKSIGYVMQD 79 (205)
T ss_pred CcccEEEEeCCcCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh-HHhhcceEEEecC
Confidence 367899999753679999999999999999999999999999999999999999999999998764 2344579999999
Q ss_pred C--CCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCCh
Q 001446 918 P--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 995 (1075)
Q Consensus 918 P--~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 995 (1075)
| .+|..|+++|+.++..... ..+..+.++++.+++.+..... ...|||
T Consensus 80 ~~~~~~~~tv~e~l~~~~~~~~--------------------~~~~~~~~~l~~~~l~~~~~~~----------~~~LS~ 129 (205)
T cd03226 80 VDYQLFTDSVREELLLGLKELD--------------------AGNEQAETVLKDLDLYALKERH----------PLSLSG 129 (205)
T ss_pred hhhhhhhccHHHHHhhhhhhcC--------------------ccHHHHHHHHHHcCCchhcCCC----------chhCCH
Confidence 8 4678999999986421100 0123456777887775543332 246999
Q ss_pred hHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCch-hhccceEEEEcC
Q 001446 996 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDG 1064 (1075)
Q Consensus 996 GQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i-~~~~~~l~l~~g 1064 (1075)
|||||++||||++++|++|||||||++||.++...+.+.+++ .++|+|+++|+++.+ ++.|+++.|.+|
T Consensus 130 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G 202 (205)
T cd03226 130 GQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANG 202 (205)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999888777643 489999999999866 589999999765
No 238
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.3e-37 Score=328.74 Aligned_cols=192 Identities=25% Similarity=0.330 Sum_probs=162.8
Q ss_pred EEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc----------cccccEE
Q 001446 184 FSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------DLNKEIF 253 (1075)
Q Consensus 184 ~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~----------~~~~~i~ 253 (1075)
++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+- ..++.++
T Consensus 1 i~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~ 79 (206)
T TIGR03608 1 LKNISKKFG-DKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKLG 79 (206)
T ss_pred CcceEEEEC-CEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCee
Confidence 468899886 46799999999999999999999999999999999999999999999998641 1245799
Q ss_pred EEcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcC
Q 001446 254 YVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 332 (1075)
Q Consensus 254 ~v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~ 332 (1075)
|++|++.++. .|++||+.++............+++.++++.+++.+..++.+ .+||||||||++|||||++
T Consensus 80 ~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~lS~G~~qr~~laral~~ 151 (206)
T TIGR03608 80 YLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNLKLKQKI--------YELSGGEQQRVALARAILK 151 (206)
T ss_pred EEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchhhhcCCh--------hhCCHHHHHHHHHHHHHHc
Confidence 9999998876 699999987432111111122356778999999988777765 6899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHhhCCeEEEE
Q 001446 333 KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVLSL 384 (1075)
Q Consensus 333 ~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~~~d~i~~l 384 (1075)
+|+++||||||++||+.+.+.+.+.+++ .+.|+|++||+++....||++++|
T Consensus 152 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 152 DPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred CCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 9999999999999999999999888764 389999999999988889999864
No 239
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.6e-37 Score=339.01 Aligned_cols=198 Identities=25% Similarity=0.372 Sum_probs=167.1
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc---------cccc
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNK 250 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~~~ 250 (1075)
..|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++
T Consensus 6 ~~l~~~~l~~~~~-~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 6 NLVDMRGVSFTRG-NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred ceEEEeCeEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 4699999999985 46799999999999999999999999999999999999999999999998531 1245
Q ss_pred cEEEEcCCCCCCcC-CHHHHhcCCCCCCc-ccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHH
Q 001446 251 EIFYVPQRPYTAVG-TLRDQLIYPLTSDQ-EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMAR 328 (1075)
Q Consensus 251 ~i~~v~Q~~~~~~~-tv~~ni~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAr 328 (1075)
+++|+||++.++.. |+.||+.++..... ........++.++++.+++.+..++.+ .+||||||||++|||
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgGq~qrv~lar 156 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMP--------SELSGGMARRAALAR 156 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhCCh--------hhCCHHHHHHHHHHH
Confidence 79999999988775 99999986532110 001112245667899999988777766 689999999999999
Q ss_pred HHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 329 LFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 329 al~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
||+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 157 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~ 219 (269)
T PRK11831 157 AIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVAD 219 (269)
T ss_pred HHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEEC
Confidence 99999999999999999999999998887754 2789999999998875 6999999986
No 240
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-37 Score=339.56 Aligned_cols=197 Identities=25% Similarity=0.364 Sum_probs=167.8
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc--------cccccEE
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------DLNKEIF 253 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~--------~~~~~i~ 253 (1075)
++++|+++.|++++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.|+
T Consensus 2 l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 81 (275)
T PRK13639 2 LETRDLKYSYPDGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTVG 81 (275)
T ss_pred EEEEEEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhheE
Confidence 78999999997556799999999999999999999999999999999999999999999999541 1356799
Q ss_pred EEcCCC--CCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHc
Q 001446 254 YVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 254 ~v~Q~~--~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~ 331 (1075)
|+||+| .++..|+.||+.++............+++.++++.+++.++.++.+ .+||||||||++|||||+
T Consensus 82 ~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~--------~~LS~Gq~qrv~laral~ 153 (275)
T PRK13639 82 IVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFENKPP--------HHLSGGQKKRVAIAGILA 153 (275)
T ss_pred EEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhcCCh--------hhCCHHHHHHHHHHHHHh
Confidence 999997 4667899999987532111111112345778999999988877766 689999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
.+|+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 154 ~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~ 212 (275)
T PRK13639 154 MKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSD 212 (275)
T ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999888764 4899999999999875 7999999986
No 241
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.6e-37 Score=330.01 Aligned_cols=199 Identities=30% Similarity=0.462 Sum_probs=170.2
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEEE
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYV 255 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~v 255 (1075)
++++|+++.|++++++++|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|+
T Consensus 1 l~~~~l~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 80 (236)
T cd03253 1 IEFENVTFAYDPGRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGVV 80 (236)
T ss_pred CEEEEEEEEeCCCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEEE
Confidence 4689999999755679999999999999999999999999999999999999999999999854 1235679999
Q ss_pred cCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcc---cCCCCCCChhHHHHHHHHHHHcC
Q 001446 256 PQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKE---INWGDELSLGEQQRLGMARLFYH 332 (1075)
Q Consensus 256 ~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~---~~~g~~LSgGqkqRl~lAral~~ 332 (1075)
||+|+++..|++||+.++... .....+.+.++.+++.+..+.+|.+.. ..+..+||||||||++|||||+.
T Consensus 81 ~q~~~~~~~tv~~nl~~~~~~------~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~ 154 (236)
T cd03253 81 PQDTVLFNDTIGYNIRYGRPD------ATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILK 154 (236)
T ss_pred CCCChhhcchHHHHHhhcCCC------CCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 999999999999999886431 123345667778888887777654322 23457899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CCeEEEEecChhhHhhCCeEEEEcC
Q 001446 333 KPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 333 ~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
+|+++||||||++||+.+...+.+.+++. |+|+|++||+.+.+..||++++|++
T Consensus 155 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~ 210 (236)
T cd03253 155 NPPILLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKD 210 (236)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEEC
Confidence 99999999999999999999998887642 7899999999999988999999986
No 242
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-37 Score=340.10 Aligned_cols=199 Identities=27% Similarity=0.388 Sum_probs=169.7
Q ss_pred ccEEEEeEEEEcCC-CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCc---cEEEeCCcCc------ccc
Q 001446 180 NYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVS---GHIAKPGVGS------DLN 249 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~-~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~---G~i~~~~~~~------~~~ 249 (1075)
..++++|+++.|++ .+++++++||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.+. ..+
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 46999999999964 3579999999999999999999999999999999999999988 8999999641 235
Q ss_pred ccEEEEcCCCC--CCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHH
Q 001446 250 KEIFYVPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 327 (1075)
Q Consensus 250 ~~i~~v~Q~~~--~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lA 327 (1075)
++++|+||+|. ++..|+.||+.++............+++.++++.++|.+..++.| .+||||||||++||
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~--------~~LS~G~~qrv~la 155 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEP--------ANLSGGQKQRVAIA 155 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCc--------ccCCHHHHHHHHHH
Confidence 67999999984 566899999987532211111112245778899999998888877 68999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 328 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 328 ral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
|||+.+|+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+..||++++|++
T Consensus 156 ral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~ 218 (282)
T PRK13640 156 GILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDD 218 (282)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999887754 37899999999999888999999975
No 243
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.1e-37 Score=329.26 Aligned_cols=202 Identities=23% Similarity=0.250 Sum_probs=163.7
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc-----CCcCcE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCGI 911 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~-----~~r~~i 911 (1075)
|+++||+++|++.+++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++...+ ..|.++
T Consensus 1 l~~~~l~~~~~~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i 80 (214)
T cd03292 1 IEFINVTKTYPNGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRKI 80 (214)
T ss_pred CEEEEEEEEeCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHhe
Confidence 478999999976567999999999999999999999999999999999999999999999999886542 235679
Q ss_pred EEEcCCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccc
Q 001446 912 FYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 990 (1075)
Q Consensus 912 ~~VpQdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 990 (1075)
+||||+|.+|.. |+++|+.++..... . .....++.+.++++.+++....... .
T Consensus 81 ~~v~q~~~~~~~~t~~~~l~~~~~~~~----------~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~ 134 (214)
T cd03292 81 GVVFQDFRLLPDRNVYENVAFALEVTG----------V------PPREIRKRVPAALELVGLSHKHRAL----------P 134 (214)
T ss_pred EEEecCchhccCCcHHHHHHHHHHHcC----------C------CHHHHHHHHHHHHHHcCCHHHhhCC----------h
Confidence 999999999984 99999975421000 0 0001123456677777775443322 2
Q ss_pred cCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCchh-hccceEEEEcC
Q 001446 991 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIP-FHSLELRLIDG 1064 (1075)
Q Consensus 991 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i~-~~~~~l~l~~g 1064 (1075)
..||||||||++||||++++|+|+||||||++||.++...+.+.+++ .++|+|+|+|++..+. +.|+++.|.+|
T Consensus 135 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G 212 (214)
T cd03292 135 AELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERG 212 (214)
T ss_pred hhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 46999999999999999999999999999999999999888776643 4899999999998765 68999999765
No 244
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-37 Score=339.75 Aligned_cols=197 Identities=23% Similarity=0.272 Sum_probs=165.5
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc--------cccccE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------DLNKEI 252 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~--------~~~~~i 252 (1075)
+++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.+
T Consensus 1 ml~~~~l~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 1 MLATSDLWFRYQ-DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred CeEEEEEEEEcC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 378999999996 46799999999999999999999999999999999999999999999998641 234679
Q ss_pred EEEcCCCC--CCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHH
Q 001446 253 FYVPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 330 (1075)
Q Consensus 253 ~~v~Q~~~--~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral 330 (1075)
+|+||+|. ++..|+.+|+.++............+++.++++.+++.++.++.+ .+||||||||++|||||
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrl~laraL 151 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRHQPI--------QCLSHGQKKRVAIAGAL 151 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhcCCc--------hhCCHHHHHHHHHHHHH
Confidence 99999985 456789999987532111111112234667899999988777655 68999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 331 YHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 331 ~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
+.+|+++||||||++||+.++..+.+.+++ .|+|+|++||+++.+ ..||++++|++
T Consensus 152 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~ 211 (271)
T PRK13638 152 VLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQ 211 (271)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999888764 488999999999988 46999999986
No 245
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-37 Score=333.30 Aligned_cols=197 Identities=28% Similarity=0.385 Sum_probs=166.9
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 254 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 254 (1075)
.++++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|
T Consensus 2 ~l~~~~l~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (258)
T PRK13548 2 MLEARNLSVRLG-GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAV 80 (258)
T ss_pred eEEEEeEEEEeC-CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEE
Confidence 478999999996 4679999999999999999999999999999999999999999999999853 123467999
Q ss_pred EcCCCCC-CcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHc--
Q 001446 255 VPQRPYT-AVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY-- 331 (1075)
Q Consensus 255 v~Q~~~~-~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~-- 331 (1075)
+||++.+ +..|++||+.++.............++.++++.+++.+..++.+ .+||||||||++|||||+
T Consensus 81 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgGe~qrv~la~al~~~ 152 (258)
T PRK13548 81 LPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGRDY--------PQLSGGEQQRVQLARVLAQL 152 (258)
T ss_pred EccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcCCc--------ccCCHHHHHHHHHHHHHhcc
Confidence 9999977 55799999987543211111112345778899999988777766 689999999999999999
Q ss_pred ----CCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 332 ----HKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 332 ----~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
.+|+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 153 ~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 216 (258)
T PRK13548 153 WEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQ 216 (258)
T ss_pred cccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEEC
Confidence 59999999999999999999988887653 4789999999999875 7999999985
No 246
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=3.4e-37 Score=329.60 Aligned_cols=194 Identities=22% Similarity=0.342 Sum_probs=162.5
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc------c-ccccEEE
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D-LNKEIFY 254 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~-~~~~i~~ 254 (1075)
|+++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .++.++|
T Consensus 1 l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (222)
T cd03224 1 LEVENLNAGYG-KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIGY 79 (222)
T ss_pred CEEeeEEeecC-CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeEE
Confidence 46899999986 45799999999999999999999999999999999999999999999998541 1 2457999
Q ss_pred EcCCCCCCcC-CHHHHhcCCCCCCcccCcCCHHHHHHHHHHc-CChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcC
Q 001446 255 VPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNV-DLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 332 (1075)
Q Consensus 255 v~Q~~~~~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~-~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~ 332 (1075)
+||++.++.. |++||+.++..... ......++.++++.+ ++.+..++.+ .+||||||||++|||||+.
T Consensus 80 ~~q~~~~~~~~t~~~~l~~~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~~ 149 (222)
T cd03224 80 VPEGRRIFPELTVEENLLLGAYARR--RAKRKARLERVYELFPRLKERRKQLA--------GTLSGGEQQMLAIARALMS 149 (222)
T ss_pred eccccccCCCCcHHHHHHHHhhhcC--chhHHHHHHHHHHHHHhhhhhhhCch--------hhCCHHHHHHHHHHHHHhc
Confidence 9999988775 99999987643211 111233455677776 4666566544 6899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 333 KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 333 ~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
+|+++||||||++||+.++..+.+.+++ .++|+|++||+++.+ ..||++++|++
T Consensus 150 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 207 (222)
T cd03224 150 RPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLER 207 (222)
T ss_pred CCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeC
Confidence 9999999999999999999999888764 478999999999986 56999999975
No 247
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=4.5e-37 Score=333.61 Aligned_cols=197 Identities=23% Similarity=0.259 Sum_probs=166.1
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCC-----ccEEEeCCcCc--------c
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV-----SGHIAKPGVGS--------D 247 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~-----~G~i~~~~~~~--------~ 247 (1075)
+++++|+++.|+ +.++++|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.+. .
T Consensus 1 ~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 1 AIEIENLNLFYG-EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred CEEEEEEEEEEC-CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 378999999996 457999999999999999999999999999999999999998 99999998641 1
Q ss_pred ccccEEEEcCCCCCCcCCHHHHhcCCCCCCcc-cCcCCHHHHHHHHHHcCCh----hHHhcCCCCcccCCCCCCChhHHH
Q 001446 248 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLE----YLLDRYPPEKEINWGDELSLGEQQ 322 (1075)
Q Consensus 248 ~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~-~~~~~~~~~~~~l~~~~l~----~~~~~~~~~~~~~~g~~LSgGqkq 322 (1075)
.++.++|+||++.++..|++||+.++...... ......+++.++++.+++. +..++.+ .+|||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LSgG~~q 151 (247)
T TIGR00972 80 LRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKDRLHDSA--------LGLSGGQQQ 151 (247)
T ss_pred HHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhhHhhCCc--------ccCCHHHHH
Confidence 34679999999988889999999875322110 0111234567889999997 5555554 689999999
Q ss_pred HHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 323 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 323 Rl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
|++|||||+.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+ ..||++++|++
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~ 218 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYD 218 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999888764 258999999999977 46999999986
No 248
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.5e-37 Score=328.46 Aligned_cols=202 Identities=24% Similarity=0.323 Sum_probs=164.2
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc-----CCcCcE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCGI 911 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~-----~~r~~i 911 (1075)
|+++|+++.|+++.++|+|+||+|++||+++|+||||||||||+++|.|+++|.+|+|.++|.++...+ ..+.++
T Consensus 2 l~~~~l~~~~~~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 81 (214)
T TIGR02673 2 IEFHNVSKAYPGGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRRI 81 (214)
T ss_pred EEEEeeeEEeCCCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhhe
Confidence 689999999965567999999999999999999999999999999999999999999999999987642 245679
Q ss_pred EEEcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccc
Q 001446 912 FYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 990 (1075)
Q Consensus 912 ~~VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 990 (1075)
+|+||+|.+|. .|+++|+.++... .+. .+...++.+.++++.+++.+..... .
T Consensus 82 ~~~~q~~~~~~~~tv~~~l~~~~~~----------~~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~ 135 (214)
T TIGR02673 82 GVVFQDFRLLPDRTVYENVALPLEV----------RGK------KEREIQRRVGAALRQVGLEHKADAF----------P 135 (214)
T ss_pred EEEecChhhccCCcHHHHHHHHHHH----------cCC------CHHHHHHHHHHHHHHcCChhhhhCC----------h
Confidence 99999999986 6999999753100 000 0001134456677777775433222 2
Q ss_pred cCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCchh-hccceEEEEcC
Q 001446 991 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIP-FHSLELRLIDG 1064 (1075)
Q Consensus 991 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i~-~~~~~l~l~~g 1064 (1075)
..||||||||++|||||+++|++|||||||++||.++...+.+.+++ .++|+|+|+|+++.+. +.|+++.|.+|
T Consensus 136 ~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 136 EQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDG 213 (214)
T ss_pred hhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCC
Confidence 46999999999999999999999999999999999999888777653 4899999999998654 78999999765
No 249
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-37 Score=349.56 Aligned_cols=204 Identities=18% Similarity=0.262 Sum_probs=169.7
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEc
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 915 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~Vp 915 (1075)
.|+++||++.|++..++|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++......+.+|+|||
T Consensus 3 ~l~i~~l~~~~~~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v~ 82 (356)
T PRK11650 3 GLKLQAVRKSYDGKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAMVF 82 (356)
T ss_pred EEEEEeEEEEeCCCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 38999999999655679999999999999999999999999999999999999999999999999987644456799999
Q ss_pred CCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCC
Q 001446 916 QRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 994 (1075)
Q Consensus 916 QdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 994 (1075)
|+|.||+ .|+++||.|+..... . .....+..+.++++.++|.++..+.| ..||
T Consensus 83 Q~~~lfp~~tv~eNi~~~~~~~~----------~------~~~~~~~~~~~~l~~~gL~~~~~~~~----------~~LS 136 (356)
T PRK11650 83 QNYALYPHMSVRENMAYGLKIRG----------M------PKAEIEERVAEAARILELEPLLDRKP----------RELS 136 (356)
T ss_pred CCccccCCCCHHHHHHhHHhhcC----------C------CHHHHHHHHHHHHHHcCChhHhhCCh----------hhCC
Confidence 9999996 599999998642100 0 00001234567788888876655442 4699
Q ss_pred hhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHH----hcCceEEEecCCCC-chhhccceEEEEcCC
Q 001446 995 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAK----DMGITFVTSSQRPA-LIPFHSLELRLIDGE 1065 (1075)
Q Consensus 995 gGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~----~~~~TvI~IaHRls-~i~~~~~~l~l~~g~ 1065 (1075)
||||||+||||||+++|++||||||||+||..+...+.+.++ +.+.|+|.|+|.+. ...+.|+++.|.+|.
T Consensus 137 gGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~ 212 (356)
T PRK11650 137 GGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGV 212 (356)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999887766553 24899999999996 668899999997664
No 250
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=4.4e-37 Score=343.98 Aligned_cols=199 Identities=29% Similarity=0.386 Sum_probs=166.6
Q ss_pred ccEEEEeEEEEcCC------------CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc-
Q 001446 180 NYIEFSGVKVVTPT------------GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS- 246 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~------------~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~- 246 (1075)
..++++|+++.|+. ..++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+.
T Consensus 7 ~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~ 86 (331)
T PRK15079 7 VLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLL 86 (331)
T ss_pred ceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECC
Confidence 46999999998863 24699999999999999999999999999999999999999999999999641
Q ss_pred --------cccccEEEEcCCCC--CC-cCCHHHHhcCCCCCC--cccCcCCHHHHHHHHHHcCCh-hHHhcCCCCcccCC
Q 001446 247 --------DLNKEIFYVPQRPY--TA-VGTLRDQLIYPLTSD--QEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINW 312 (1075)
Q Consensus 247 --------~~~~~i~~v~Q~~~--~~-~~tv~~ni~~~~~~~--~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~ 312 (1075)
.++++|+||||+|. ++ ..|+.+|+.++.... ........+++.++++.+++. +..+++|
T Consensus 87 ~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p------- 159 (331)
T PRK15079 87 GMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRYP------- 159 (331)
T ss_pred cCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCCc-------
Confidence 13568999999983 44 479999997653211 011112234567889999994 5677777
Q ss_pred CCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 313 GDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 313 g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
.+|||||||||+|||||+.+|++||+||||++||..+...+.+.+++ .|.|+|+||||++.+. .||+|++|.+
T Consensus 160 -~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 160 -HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 68999999999999999999999999999999999999998887753 3899999999999986 6999999985
No 251
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-37 Score=340.89 Aligned_cols=197 Identities=23% Similarity=0.304 Sum_probs=164.1
Q ss_pred EEEEeEEEEcCCC----CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc----------c
Q 001446 182 IEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------D 247 (1075)
Q Consensus 182 i~~~~v~~~~~~~----~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~----------~ 247 (1075)
++++|+++.|++. +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+. .
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 7899999999742 4699999999999999999999999999999999999999999999998531 1
Q ss_pred ccccEEEEcCCC--CCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCCh-hHHhcCCCCcccCCCCCCChhHHHHH
Q 001446 248 LNKEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQRL 324 (1075)
Q Consensus 248 ~~~~i~~v~Q~~--~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGqkqRl 324 (1075)
+++.|+|+||+| .++..|++||+.++............+.+.++++.+++. ...++.+ .+||||||||+
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--------~~LSgG~~qrv 154 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESLFEKNP--------FELSGGQMRRV 154 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCc--------ccCCHHHHHHH
Confidence 346799999998 567789999998753211110111123456788889996 3555544 68999999999
Q ss_pred HHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 325 GMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 325 ~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
+|||||+.+|+++||||||++||+.+++.+.+.+++ .++|+|++||+++.+ ..||++++|++
T Consensus 155 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~ 220 (280)
T PRK13649 155 AIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEK 220 (280)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999888764 488999999999987 47999999986
No 252
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=6.6e-37 Score=324.51 Aligned_cols=194 Identities=22% Similarity=0.321 Sum_probs=164.7
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC----ccccccEEEEcC
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFYVPQ 257 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~----~~~~~~i~~v~Q 257 (1075)
++++|+++.|+. .++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|+||
T Consensus 1 ~~~~~l~~~~~~---~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q 77 (213)
T TIGR01277 1 LALDKVRYEYEH---LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLAPYQRPVSMLFQ 77 (213)
T ss_pred CeEEeeeEEeCC---cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCChhccceEEEec
Confidence 368999999852 5689999999999999999999999999999999999999999999864 134567999999
Q ss_pred CCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCE
Q 001446 258 RPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 336 (1075)
Q Consensus 258 ~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~i 336 (1075)
+|.++. .|++||+.++.............++.++++.+++.+..++.| .+||||||||++||||++.+|++
T Consensus 78 ~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~laral~~~p~l 149 (213)
T TIGR01277 78 ENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP--------EQLSGGQRQRVALARCLVRPNPI 149 (213)
T ss_pred cCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc--------ccCCHHHHHHHHHHHHHhcCCCE
Confidence 998876 499999986532111011122456778999999998888877 68999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 337 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 337 llLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
+||||||++||+.+...+.+.+++ .+.|+|++||+.+.+. .+|++++|++
T Consensus 150 lllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~ 204 (213)
T TIGR01277 150 LLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQ 204 (213)
T ss_pred EEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEEC
Confidence 999999999999999998887754 3789999999999875 6999999975
No 253
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-37 Score=341.49 Aligned_cols=199 Identities=24% Similarity=0.257 Sum_probs=164.5
Q ss_pred ccEEEEeEEEEcCCC----CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC----------
Q 001446 180 NYIEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG---------- 245 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~----~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~---------- 245 (1075)
+.++++|+++.|++. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 469999999999653 259999999999999999999999999999999999999999999998853
Q ss_pred -ccccccEEEEcCCCC--CCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCCh-hHHhcCCCCcccCCCCCCChhHH
Q 001446 246 -SDLNKEIFYVPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQ 321 (1075)
Q Consensus 246 -~~~~~~i~~v~Q~~~--~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGqk 321 (1075)
..+++.++|+||+|. ++..|++||+.++............+++.++++.+++. ++.++.+ .+||||||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~--------~~LS~Gq~ 156 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYVKRSP--------FELSGGQK 156 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhcCCh--------hhCCHHHH
Confidence 123567999999983 56679999998753211111111123456788888984 5666654 68999999
Q ss_pred HHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 322 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 322 qRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
||++|||||+.+|++|||||||++||+.+++.+.+.+++ .|+|+|++||+++.+ ..||++++|++
T Consensus 157 qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~ 226 (289)
T PRK13645 157 RRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHE 226 (289)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999998887653 388999999999986 57999999986
No 254
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-37 Score=348.52 Aligned_cols=183 Identities=26% Similarity=0.337 Sum_probs=157.1
Q ss_pred eeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc------c----ccccEEEEcCCCCCCc-C
Q 001446 196 VLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D----LNKEIFYVPQRPYTAV-G 264 (1075)
Q Consensus 196 ~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~----~~~~i~~v~Q~~~~~~-~ 264 (1075)
.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .+++++|+||++.++. .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 489999999999999999999999999999999999999999999998641 1 1357999999998876 5
Q ss_pred CHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeCCCC
Q 001446 265 TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTS 344 (1075)
Q Consensus 265 tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~illLDEpts 344 (1075)
|++||+.++............+++.++++.++|.+..++.| .+||||||||++|||||+.+|++|||||||+
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~--------~~LSgGq~QRv~LArAL~~~P~iLLLDEPts 193 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYP--------DELSGGMRQRVGLARALAINPDILLMDEAFS 193 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCc--------ccCCHHHHHHHHHHHHHhcCCCEEEEECCCc
Confidence 99999988643211111122356778999999998888887 6899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 345 AVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 345 ~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
+||+.+++.+.+.+++ .++|+|++||+++.+ ..||++++|++
T Consensus 194 ~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~ 240 (400)
T PRK10070 194 ALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQN 240 (400)
T ss_pred cCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEEC
Confidence 9999999999887753 488999999999987 57999999986
No 255
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-37 Score=337.28 Aligned_cols=199 Identities=26% Similarity=0.329 Sum_probs=168.5
Q ss_pred ccEEEEeEEEEcCCC-CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc------cccccE
Q 001446 180 NYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DLNKEI 252 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~-~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~~~~~i 252 (1075)
+.++++|+++.|++. +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.+
T Consensus 6 ~~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 6 SIIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred ceEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 469999999999753 4699999999999999999999999999999999999999999999999641 245679
Q ss_pred EEEcCCCC--CCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHH
Q 001446 253 FYVPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 330 (1075)
Q Consensus 253 ~~v~Q~~~--~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral 330 (1075)
+|+||+|. ++..|+++|+.++............+++.++++.+++.++.++.+ .+||||||||++||||+
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~laral 157 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERADYEP--------NALSGGQKQRVAIAGVL 157 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhhCCc--------ccCCHHHHHHHHHHHHH
Confidence 99999985 455689999987643211111112345678899999988777765 68999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 331 YHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 331 ~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+..||++++|++
T Consensus 158 ~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~ 217 (269)
T PRK13648 158 ALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNK 217 (269)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEEC
Confidence 999999999999999999999998887754 37899999999998878999999986
No 256
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=5.8e-37 Score=331.45 Aligned_cols=196 Identities=27% Similarity=0.392 Sum_probs=166.8
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc--------cccccEE
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------DLNKEIF 253 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~--------~~~~~i~ 253 (1075)
++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.++
T Consensus 2 l~~~~l~~~~~-~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 80 (240)
T PRK09493 2 IEFKNVSKHFG-PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAG 80 (240)
T ss_pred EEEEeEEEEEC-CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhceE
Confidence 78999999986 46799999999999999999999999999999999999999999999998541 2356799
Q ss_pred EEcCCCCCCc-CCHHHHhcCCCCC-CcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHc
Q 001446 254 YVPQRPYTAV-GTLRDQLIYPLTS-DQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 254 ~v~Q~~~~~~-~tv~~ni~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~ 331 (1075)
|+||++.++. .|+++|+.++... .........+++.++++.+++.+..++.+ ..||||||||++||||++
T Consensus 81 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~~qrv~la~al~ 152 (240)
T PRK09493 81 MVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAHHYP--------SELSGGQQQRVAIARALA 152 (240)
T ss_pred EEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHhcCh--------hhcCHHHHHHHHHHHHHh
Confidence 9999998775 5999999875311 11111112345678899999988777766 689999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+. .||++++|++
T Consensus 153 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 211 (240)
T PRK09493 153 VKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDK 211 (240)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999887753 4899999999999885 6999999986
No 257
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.6e-37 Score=294.42 Aligned_cols=203 Identities=18% Similarity=0.224 Sum_probs=168.1
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEcC
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 916 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~VpQ 916 (1075)
|.+++|.|.|...+ -.++++|++||+|||+||||||||||++++.||..|.+|+|.|+|+|.......++-++++.|
T Consensus 2 l~L~~V~~~y~~~~---~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSmlFQ 78 (231)
T COG3840 2 LALDDVRFSYGHLP---MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSMLFQ 78 (231)
T ss_pred ccccceEEeeCcce---EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhhhh
Confidence 45778899886543 357899999999999999999999999999999999999999999999988666667999999
Q ss_pred CCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCCh
Q 001446 917 RPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 995 (1075)
Q Consensus 917 dP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 995 (1075)
|.-||. -||.+|+..+.+.. ++ +.....+.+..++..+||..+..++| ..|||
T Consensus 79 EnNLFaHLtV~qNigLGl~P~------Lk----------L~a~~r~~v~~aa~~vGl~~~~~RLP----------~~LSG 132 (231)
T COG3840 79 ENNLFAHLTVAQNIGLGLSPG------LK----------LNAEQREKVEAAAAQVGLAGFLKRLP----------GELSG 132 (231)
T ss_pred ccccchhhhhhhhhcccCCcc------cc----------cCHHHHHHHHHHHHHhChhhHhhhCc----------cccCc
Confidence 999997 59999998754320 00 00011344667788999988877775 45899
Q ss_pred hHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHH----HHHHhcCceEEEecCCCC-chhhccceEEEEcCCcce
Q 001446 996 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLY----RLAKDMGITFVTSSQRPA-LIPFHSLELRLIDGEGNW 1068 (1075)
Q Consensus 996 GQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~----~~~~~~~~TvI~IaHRls-~i~~~~~~l~l~~g~g~~ 1068 (1075)
|||||+|+||+|+|+-+||+||||-||||+.....|. ++..+++.|+++|+|.++ ..+..++++.+++|.=.|
T Consensus 133 GqRQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~ 210 (231)
T COG3840 133 GQRQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAA 210 (231)
T ss_pred hHHHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEe
Confidence 9999999999999999999999999999998766554 444568999999999995 778999999998886444
No 258
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-37 Score=332.25 Aligned_cols=207 Identities=27% Similarity=0.355 Sum_probs=173.7
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEEEE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFYV 914 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~~V 914 (1075)
|+++|+++.|++..++|+|+||+|++||.++|+||+|||||||+++|.|+++|.+|+|.+||.++...+ ..|..++|+
T Consensus 1 l~~~~l~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 80 (236)
T cd03253 1 IEFENVTFAYDPGRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGVV 80 (236)
T ss_pred CEEEEEEEEeCCCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEEE
Confidence 578999999976567999999999999999999999999999999999999999999999999887652 345679999
Q ss_pred cCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccCC
Q 001446 915 PQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDIL 993 (1075)
Q Consensus 915 pQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~L 993 (1075)
||+|.+|++|+++|+.++... ..+..+.+.++.+++.+.+..++.|+++.. .+...|
T Consensus 81 ~q~~~~~~~tv~~nl~~~~~~----------------------~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~L 138 (236)
T cd03253 81 PQDTVLFNDTIGYNIRYGRPD----------------------ATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKL 138 (236)
T ss_pred CCCChhhcchHHHHHhhcCCC----------------------CCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcC
Confidence 999999999999999865321 011223344455566666666667777765 356789
Q ss_pred ChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 994 SLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 994 SgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
|+|||||++|||||+++|++|||||||++||.++...+.+.+++ .+.|+|+|+|+++.+..+|+++.|.+|.
T Consensus 139 S~G~~~rl~la~aL~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~ 212 (236)
T cd03253 139 SGGEKQRVAIARAILKNPPILLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGR 212 (236)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999888777643 3789999999999888899999997664
No 259
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-37 Score=338.12 Aligned_cols=195 Identities=26% Similarity=0.315 Sum_probs=164.4
Q ss_pred EEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc------c----ccccE
Q 001446 183 EFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D----LNKEI 252 (1075)
Q Consensus 183 ~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~----~~~~i 252 (1075)
.++|+++.|. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .++++
T Consensus 26 ~~~~~~~~~~-~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i 104 (269)
T cd03294 26 SKEEILKKTG-QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKI 104 (269)
T ss_pred hhhhhhhhcC-CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcE
Confidence 5668888874 56799999999999999999999999999999999999999999999998541 1 13579
Q ss_pred EEEcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHc
Q 001446 253 FYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 253 ~~v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~ 331 (1075)
+|+||++.++. .|++||+.++............+++.++++.+++.+..++.+ .+||||||||++|||||+
T Consensus 105 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~Gq~qrv~lAral~ 176 (269)
T cd03294 105 SMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP--------DELSGGMQQRVGLARALA 176 (269)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc--------ccCCHHHHHHHHHHHHHh
Confidence 99999998875 699999987532111111112345778999999998888877 689999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
.+|+++||||||++||+.+++.+.+.+++ .|+|+|++||+++.+ ..||++++|++
T Consensus 177 ~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~ 236 (269)
T cd03294 177 VDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKD 236 (269)
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 99999999999999999999999887753 379999999999886 57999999985
No 260
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=333.56 Aligned_cols=198 Identities=27% Similarity=0.353 Sum_probs=168.2
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEE
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIF 253 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~ 253 (1075)
..++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++
T Consensus 10 ~~l~i~~l~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 10 TTFALRNVSFRVP-GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred ceEEEeeEEEEEC-CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 4699999999996 4689999999999999999999999999999999999999999999999854 12356799
Q ss_pred EEcCCCCCCc-CCHHHHhcCCCCCCc----ccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHH
Q 001446 254 YVPQRPYTAV-GTLRDQLIYPLTSDQ----EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMAR 328 (1075)
Q Consensus 254 ~v~Q~~~~~~-~tv~~ni~~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAr 328 (1075)
|+||++.++. .|+.||+.++..... .......+++.++++.+++.+..++.+ .+||||||||++|||
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~lar 160 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV--------DSLSGGERQRAWIAM 160 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc--------ccCCHHHHHHHHHHH
Confidence 9999986655 599999987532110 001112346778999999988888776 689999999999999
Q ss_pred HHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 329 LFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 329 al~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
||+.+|+++||||||++||+.+.+.+.+.+++ .|.|+|++||+++.+ ..||++++|++
T Consensus 161 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~ 223 (265)
T PRK10575 161 LVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRG 223 (265)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999988887753 379999999999987 57999999986
No 261
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-37 Score=331.79 Aligned_cols=203 Identities=20% Similarity=0.243 Sum_probs=163.0
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc-----CCcCcE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCGI 911 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~-----~~r~~i 911 (1075)
|+++||++.|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++...+ ..|.++
T Consensus 1 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~i 79 (235)
T cd03261 1 IELRGLTKSFGG-RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRRM 79 (235)
T ss_pred CeEEEEEEEECC-EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcce
Confidence 578999999964 56999999999999999999999999999999999999999999999999886542 245679
Q ss_pred EEEcCCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccc
Q 001446 912 FYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 990 (1075)
Q Consensus 912 ~~VpQdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 990 (1075)
+||||+|.+|++ |+++|+.++..... +. .....++.+.++++.+++.+...+. .
T Consensus 80 ~~v~q~~~~~~~~tv~~~l~~~~~~~~---------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~ 134 (235)
T cd03261 80 GMLFQSGALFDSLTVFENVAFPLREHT---------RL------SEEEIREIVLEKLEAVGLRGAEDLY----------P 134 (235)
T ss_pred EEEccCcccCCCCcHHHHHHHHHhhcc---------CC------CHHHHHHHHHHHHHHcCCchhhcCC----------h
Confidence 999999999986 99999975311000 00 0000123455667777774433222 2
Q ss_pred cCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 991 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 991 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
..||||||||++|||||+++|+||||||||++||..+...+.+.+++ .++|+|+|+|+++.+ .+.|+++.|.+|.
T Consensus 135 ~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~ 214 (235)
T cd03261 135 AELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGK 214 (235)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCe
Confidence 46999999999999999999999999999999999999888776643 389999999999855 5799999997654
No 262
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-37 Score=336.98 Aligned_cols=198 Identities=23% Similarity=0.303 Sum_probs=168.3
Q ss_pred cEEEEeEEEEcCCC--CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccE
Q 001446 181 YIEFSGVKVVTPTG--NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEI 252 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~--~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i 252 (1075)
.++++|+++.|++. .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.+ ..+++.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 58999999999742 469999999999999999999999999999999999999999999999864 1245679
Q ss_pred EEEcCCCC--CCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHH
Q 001446 253 FYVPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 330 (1075)
Q Consensus 253 ~~v~Q~~~--~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral 330 (1075)
+|+||+|. ++..|+.||+.++............+++.++++.+++.++.++.+ ..||||||||++|||||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~lAraL 155 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTREP--------ARLSGGQKQRVAVAGII 155 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCCc--------ccCCHHHHHHHHHHHHH
Confidence 99999984 566799999987532111111111245678899999988887766 68999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 331 YHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 331 ~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
+.+|+++||||||++||+.+...+.+.+++ .|.|+|++||+++.+..||++++|++
T Consensus 156 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~ 215 (277)
T PRK13642 156 ALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKA 215 (277)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEEC
Confidence 999999999999999999999999887753 38999999999999888999999986
No 263
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=4.4e-37 Score=333.38 Aligned_cols=211 Identities=23% Similarity=0.272 Sum_probs=165.8
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc-----CCcCcE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCGI 911 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~-----~~r~~i 911 (1075)
|+++||+++|+..+++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++...+ ..|.++
T Consensus 2 l~~~~l~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 81 (243)
T TIGR02315 2 LEVENLSKVYPNGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRRI 81 (243)
T ss_pred eEEEeeeeecCCCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhhe
Confidence 689999999973467999999999999999999999999999999999999999999999999887542 235679
Q ss_pred EEEcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccc
Q 001446 912 FYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 990 (1075)
Q Consensus 912 ~~VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 990 (1075)
+||||+|.+|. .|+++|+.++........... .+ ......++.+.++++.+++....... .
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~l~~~~l~~~~~~~----------~ 143 (243)
T TIGR02315 82 GMIFQHYNLIERLTVLENVLHGRLGYKPTWRSL--LG------RFSEEDKERALSALERVGLADKAYQR----------A 143 (243)
T ss_pred EEEcCCCcccccccHHHHHhhcccccccchhhh--hc------cccHHHHHHHHHHHHHcCcHhhhcCC----------c
Confidence 99999999886 599999976432100000000 00 00011134566777777775433221 3
Q ss_pred cCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 991 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 991 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
..||||||||++|||||+++|++|||||||++||.++...+.+.+++ .++|+|+|+|+++.+ ++.|+++.|.+|.
T Consensus 144 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~ 223 (243)
T TIGR02315 144 DQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGE 223 (243)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCE
Confidence 56999999999999999999999999999999999999887776643 379999999999876 7899999997664
No 264
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2.1e-36 Score=322.06 Aligned_cols=197 Identities=18% Similarity=0.305 Sum_probs=165.7
Q ss_pred EEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc----------cccccE
Q 001446 183 EFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------DLNKEI 252 (1075)
Q Consensus 183 ~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~----------~~~~~i 252 (1075)
.+.|+.+.|+.+.++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.+
T Consensus 2 ~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 81 (218)
T cd03290 2 QVTNGYFSWGSGLATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYSV 81 (218)
T ss_pred eeeeeEEecCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcceE
Confidence 4678899998667899999999999999999999999999999999999999999999998641 123579
Q ss_pred EEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCChhHHHHHHHHHH
Q 001446 253 FYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARL 329 (1075)
Q Consensus 253 ~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkqRl~lAra 329 (1075)
+|++|+|.++..|++||+.++... ...+..++++.+++.+..+..|.+..+ .....||||||||++||||
T Consensus 82 ~~~~q~~~~~~~t~~~nl~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~lara 154 (218)
T cd03290 82 AYAAQKPWLLNATVEENITFGSPF-------NKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARA 154 (218)
T ss_pred EEEcCCCccccccHHHHHhhcCcC-------CHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHH
Confidence 999999998888999999876321 233456778888888777665543222 2357899999999999999
Q ss_pred HcCCCCEEEEeCCCCCCCHHHHHHHHH--H---HHhcCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 330 FYHKPKFAILDECTSAVTTDMEERFCA--K---VRAMGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 330 l~~~p~illLDEpts~LD~~~~~~i~~--~---l~~~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
++.+|+++||||||++||+.+.+.+++ . +++.|.|+|++||+.+.+..+|++++|++
T Consensus 155 l~~~p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~ 216 (218)
T cd03290 155 LYQNTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKD 216 (218)
T ss_pred HhhCCCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecC
Confidence 999999999999999999999987776 2 33458999999999999888999999975
No 265
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-36 Score=327.15 Aligned_cols=200 Identities=26% Similarity=0.410 Sum_probs=168.7
Q ss_pred EEEEeEEEEcCCC-CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEE
Q 001446 182 IEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 254 (1075)
Q Consensus 182 i~~~~v~~~~~~~-~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 254 (1075)
++++|+++.|++. +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4689999999643 379999999999999999999999999999999999999999999999854 123567999
Q ss_pred EcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcc---cCCCCCCChhHHHHHHHHHHHc
Q 001446 255 VPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKE---INWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 255 v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~---~~~g~~LSgGqkqRl~lAral~ 331 (1075)
+||+++++..|++||+.++... .....+.+.++..++.+..+.+|.+.. .....+||||||||++|||||+
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~ 154 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPG------ATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALL 154 (234)
T ss_pred eCCCCeeccccHHHHhhccCCC------CCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHh
Confidence 9999999889999999886432 123345566677777777766643221 1235789999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcCC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGE 387 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~ 387 (1075)
.+|+++||||||++||+.+.+.+.+.+++ .+.|+|++||+++.+..||++++|+++
T Consensus 155 ~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G 212 (234)
T cd03251 155 KDPPILILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDG 212 (234)
T ss_pred cCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCC
Confidence 99999999999999999999999988865 388999999999998889999999863
No 266
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=5.3e-37 Score=328.77 Aligned_cols=202 Identities=26% Similarity=0.424 Sum_probs=161.5
Q ss_pred CccEEEEeEEEEcCCC--CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccc
Q 001446 179 ANYIEFSGVKVVTPTG--NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNK 250 (1075)
Q Consensus 179 ~~~i~~~~v~~~~~~~--~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~ 250 (1075)
.+.++++|+++.|++. .++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 3579999999999752 479999999999999999999999999999999999999999999999864 12346
Q ss_pred cEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCc---ccCCCCCCChhHHHHHHHH
Q 001446 251 EIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEK---EINWGDELSLGEQQRLGMA 327 (1075)
Q Consensus 251 ~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---~~~~g~~LSgGqkqRl~lA 327 (1075)
.++|+||++.++..|++||+.++.... ...++.+..+..++.+.++.++.+. ......+||||||||++||
T Consensus 89 ~i~~~~q~~~l~~~tv~~nl~~~~~~~------~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~la 162 (226)
T cd03248 89 KVSLVGQEPVLFARSLQDNIAYGLQSC------SFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIA 162 (226)
T ss_pred hEEEEecccHHHhhhHHHHhccccCCC------CHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHH
Confidence 799999999988889999998764321 1111122222223333333322110 0112378999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 328 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 328 ral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
|||+++|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+..||++++|++
T Consensus 163 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~ 223 (226)
T cd03248 163 RALIRNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDG 223 (226)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecC
Confidence 999999999999999999999999999988865 36899999999999888999999975
No 267
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=5.4e-37 Score=341.29 Aligned_cols=197 Identities=22% Similarity=0.329 Sum_probs=168.3
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----ccccccEEEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYV 255 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v 255 (1075)
.++++|+++.|+ ++.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|+
T Consensus 2 ~l~~~~l~~~~~-~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~ig~~ 80 (301)
T TIGR03522 2 SIRVSSLTKLYG-TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNIGYL 80 (301)
T ss_pred EEEEEEEEEEEC-CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhceEEe
Confidence 378999999995 4679999999999999999999999999999999999999999999999964 1245679999
Q ss_pred cCCCCCCcC-CHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCC
Q 001446 256 PQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 334 (1075)
Q Consensus 256 ~Q~~~~~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p 334 (1075)
||+|.++.. |+.||+.+.............+++.++++.+++.+..++.+ ..||||||||++|||||+++|
T Consensus 81 ~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~~qrv~la~al~~~p 152 (301)
T TIGR03522 81 PEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQHKKI--------GQLSKGYRQRVGLAQALIHDP 152 (301)
T ss_pred cCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHhcCch--------hhCCHHHHHHHHHHHHHhcCC
Confidence 999988765 99999976432111111112346778999999998877765 689999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHhc--CCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 335 KFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 335 ~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
+++||||||+|||+.+.+.+.+.+++. ++|+|++||+++.+. .||++++|++
T Consensus 153 ~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~ 207 (301)
T TIGR03522 153 KVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINK 207 (301)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999887653 789999999999775 6999999986
No 268
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=9.7e-37 Score=324.65 Aligned_cols=204 Identities=18% Similarity=0.280 Sum_probs=167.1
Q ss_pred EEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc------CCcCcE
Q 001446 838 SFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA------GSGCGI 911 (1075)
Q Consensus 838 ~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~------~~r~~i 911 (1075)
.+.|+.|.|+...++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+ ..|..+
T Consensus 2 ~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 81 (218)
T cd03290 2 QVTNGYFSWGSGLATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYSV 81 (218)
T ss_pred eeeeeEEecCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcceE
Confidence 46688899987678999999999999999999999999999999999999999999999999876532 234579
Q ss_pred EEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccc
Q 001446 912 FYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWE 990 (1075)
Q Consensus 912 ~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g 990 (1075)
+|+||+|.+|+.|+++||.++....+ ....++++.+++.+.++..|.|+++.. ...
T Consensus 82 ~~~~q~~~~~~~t~~~nl~~~~~~~~-----------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 138 (218)
T cd03290 82 AYAAQKPWLLNATVEENITFGSPFNK-----------------------QRYKAVTDACSLQPDIDLLPFGDQTEIGERG 138 (218)
T ss_pred EEEcCCCccccccHHHHHhhcCcCCH-----------------------HHHHHHHHHhCcHHHHHhCcCccccCcccCC
Confidence 99999999999999999987532111 112234455555555555566777654 345
Q ss_pred cCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHH--HH---HhcCceEEEecCCCCchhhccceEEEEcC
Q 001446 991 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYR--LA---KDMGITFVTSSQRPALIPFHSLELRLIDG 1064 (1075)
Q Consensus 991 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~--~~---~~~~~TvI~IaHRls~i~~~~~~l~l~~g 1064 (1075)
..||+|||||++||||++++|+||||||||++||..+...+.+ ++ ++.+.|+|+++|+.+.+.+.|+++.+.+|
T Consensus 139 ~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G 217 (218)
T cd03290 139 INLSGGQRQRICVARALYQNTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDG 217 (218)
T ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCC
Confidence 6899999999999999999999999999999999998776654 33 33579999999999988999999999765
No 269
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.9e-37 Score=330.46 Aligned_cols=206 Identities=21% Similarity=0.287 Sum_probs=165.2
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEcC
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 916 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~VpQ 916 (1075)
|+++||++.|++ +++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.++|.++...+..+.+++||||
T Consensus 3 l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q 81 (239)
T cd03296 3 IEVRNVSKRFGD-FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFVFQ 81 (239)
T ss_pred EEEEeEEEEECC-EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEEec
Confidence 789999999975 5799999999999999999999999999999999999999999999999988765444567999999
Q ss_pred CCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCCh
Q 001446 917 RPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 995 (1075)
Q Consensus 917 dP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 995 (1075)
+|.+|. .|+++|+.++..... ..... .....++.+.++++.++|.+..... ...||+
T Consensus 82 ~~~~~~~~tv~e~l~~~~~~~~----------~~~~~--~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS~ 139 (239)
T cd03296 82 HYALFRHMTVFDNVAFGLRVKP----------RSERP--PEAEIRAKVHELLKLVQLDWLADRY----------PAQLSG 139 (239)
T ss_pred CCcccCCCCHHHHHhhhhhhcc----------ccccC--CHHHHHHHHHHHHHHcCChhhhhcC----------hhhCCH
Confidence 999986 599999986421000 00000 0000123455667777775443322 346999
Q ss_pred hHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCc-hhhccceEEEEcCC
Q 001446 996 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPAL-IPFHSLELRLIDGE 1065 (1075)
Q Consensus 996 GQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~-i~~~~~~l~l~~g~ 1065 (1075)
|||||++|||||+++|++|||||||++||.++...+.+.+++ .++|+|+|+|+++. ..+.|+++.|.+|.
T Consensus 140 G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~ 214 (239)
T cd03296 140 GQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGR 214 (239)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 999999999999999999999999999999999888776643 37899999999985 56899999997664
No 270
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=8e-37 Score=325.59 Aligned_cols=197 Identities=25% Similarity=0.428 Sum_probs=168.1
Q ss_pred EEEEeEEEEcCCC---CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc---------ccc
Q 001446 182 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLN 249 (1075)
Q Consensus 182 i~~~~v~~~~~~~---~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~---------~~~ 249 (1075)
++++|+++.|+++ +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.+. ..+
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 6899999998642 6799999999999999999999999999999999999999999999998641 134
Q ss_pred ccEEEEcCCCCCCc-CCHHHHhcCCCCCCcc-cCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHH
Q 001446 250 KEIFYVPQRPYTAV-GTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 327 (1075)
Q Consensus 250 ~~i~~v~Q~~~~~~-~tv~~ni~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lA 327 (1075)
+.++|+||+|.++. .|+.||+.++...... ......+++.++++.+++.+..++.+ .+||||||||++||
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~lS~G~~qrv~la 153 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLDYYP--------HNLSGGQKQRVAIA 153 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhcCh--------hhCCHHHHHHHHHH
Confidence 67999999998876 6999999875321111 01112345778999999988888876 68999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 328 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 328 ral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
||++.+|+++||||||++||+.++..+.+.+++ .++|+|++||+++....||++++|++
T Consensus 154 ral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~ 216 (220)
T TIGR02982 154 RALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMED 216 (220)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEEC
Confidence 999999999999999999999999988887753 37999999999998888999999975
No 271
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-37 Score=345.79 Aligned_cols=201 Identities=21% Similarity=0.274 Sum_probs=169.9
Q ss_pred CceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEE
Q 001446 835 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYV 914 (1075)
Q Consensus 835 g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~V 914 (1075)
..|+++||++.|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++......+++++||
T Consensus 5 ~~l~~~~l~~~~~~-~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v 83 (351)
T PRK11432 5 NFVVLKNITKRFGS-NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDICMV 83 (351)
T ss_pred cEEEEEeEEEEECC-eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEE
Confidence 46999999999964 56999999999999999999999999999999999999999999999999998775555679999
Q ss_pred cCCCCCCCc-chhhhhcCCCCh---HHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccc
Q 001446 915 PQRPYTCLG-TLRDQIIYPLSR---EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 990 (1075)
Q Consensus 915 pQdP~Lf~g-Tir~NL~~p~~~---~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 990 (1075)
+|+|.||+. |+++|+.|+... ... ..++.+.++++.++|.++..+. .
T Consensus 84 fQ~~~lfp~~tv~eNi~~~l~~~~~~~~-------------------~~~~~v~~~l~~~gl~~~~~r~----------~ 134 (351)
T PRK11432 84 FQSYALFPHMSLGENVGYGLKMLGVPKE-------------------ERKQRVKEALELVDLAGFEDRY----------V 134 (351)
T ss_pred eCCcccCCCCCHHHHHHHHHhHcCCCHH-------------------HHHHHHHHHHHHcCCchhhcCC----------h
Confidence 999999975 999999986421 000 0134556777888886554433 3
Q ss_pred cCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCc-hhhccceEEEEcCC
Q 001446 991 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPAL-IPFHSLELRLIDGE 1065 (1075)
Q Consensus 991 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~-i~~~~~~l~l~~g~ 1065 (1075)
..||||||||+||||||+++|++||||||||+||..+...+.+.+++ .++|+|.|+|.++. ..+.|++++|.+|.
T Consensus 135 ~~LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~ 214 (351)
T PRK11432 135 DQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGK 214 (351)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 56999999999999999999999999999999999998887766542 48999999999974 58899999998765
No 272
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-37 Score=329.04 Aligned_cols=204 Identities=22% Similarity=0.283 Sum_probs=164.8
Q ss_pred ceEEeeeeeeCCCc---cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccC-----C
Q 001446 836 SISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAG-----S 907 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~---~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~-----~ 907 (1075)
-|+++||++.|++. .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++...+. .
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 48999999999752 579999999999999999999999999999999999999999999999999876531 2
Q ss_pred -cCcEEEEcCCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcc
Q 001446 908 -GCGIFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 985 (1075)
Q Consensus 908 -r~~i~~VpQdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt 985 (1075)
+.+++|+||+|.+|++ |+++|+.++... .+.. ....++.+.++++.++|.+.....
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~----------~~~~------~~~~~~~~~~~l~~~gl~~~~~~~------ 142 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLI----------GKKK------PAEINSRALEMLAAVGLEHRANHR------ 142 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHh----------cCCC------HHHHHHHHHHHHHHcCCchhhhCC------
Confidence 2569999999999875 999999753110 0000 000123456677777775433222
Q ss_pred ccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCchhhccceEEE
Q 001446 986 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRL 1061 (1075)
Q Consensus 986 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i~~~~~~l~l 1061 (1075)
...||||||||++||||++++|+||||||||++||.++...+.+.+++ .|+|+|+|+|+++.+...++++.|
T Consensus 143 ----~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l 218 (233)
T PRK11629 143 ----PSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEM 218 (233)
T ss_pred ----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEE
Confidence 346999999999999999999999999999999999999887776643 489999999999988878899999
Q ss_pred EcCC
Q 001446 1062 IDGE 1065 (1075)
Q Consensus 1062 ~~g~ 1065 (1075)
.+|.
T Consensus 219 ~~G~ 222 (233)
T PRK11629 219 RDGR 222 (233)
T ss_pred ECCE
Confidence 7654
No 273
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.2e-36 Score=329.52 Aligned_cols=197 Identities=25% Similarity=0.337 Sum_probs=167.6
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc-------cccccEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIF 253 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~-------~~~~~i~ 253 (1075)
.++++|+++.|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++
T Consensus 2 ~i~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (242)
T TIGR03411 2 ILYLEGLSVSFDG-FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIG 80 (242)
T ss_pred eEEEEeeEEEcCC-eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCee
Confidence 5889999999964 6799999999999999999999999999999999999999999999998641 1234699
Q ss_pred EEcCCCCCCcC-CHHHHhcCCCCCCcc--------cCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHH
Q 001446 254 YVPQRPYTAVG-TLRDQLIYPLTSDQE--------VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRL 324 (1075)
Q Consensus 254 ~v~Q~~~~~~~-tv~~ni~~~~~~~~~--------~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl 324 (1075)
|+||++.++.. |++||+.++...... .......++.++++.+++.+..++.+ .+||||||||+
T Consensus 81 ~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~Ge~qrv 152 (242)
T TIGR03411 81 RKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLA--------GLLSHGQKQWL 152 (242)
T ss_pred EeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHH
Confidence 99999988875 999999875321110 00112346778899999987777655 68999999999
Q ss_pred HHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 325 GMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 325 ~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
+||||++.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+. .||+++++++
T Consensus 153 ~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 217 (242)
T TIGR03411 153 EIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQ 217 (242)
T ss_pred HHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999998875 3689999999999885 6999999986
No 274
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=6.8e-37 Score=333.24 Aligned_cols=197 Identities=25% Similarity=0.347 Sum_probs=165.8
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc--------------
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------------- 246 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~-------------- 246 (1075)
.++++|+++.|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (250)
T PRK11264 3 AIEVKNLVKKFH-GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIR 81 (250)
T ss_pred cEEEeceEEEEC-CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHH
Confidence 589999999996 45799999999999999999999999999999999999999999999988531
Q ss_pred cccccEEEEcCCCCCCc-CCHHHHhcCCCCC-CcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHH
Q 001446 247 DLNKEIFYVPQRPYTAV-GTLRDQLIYPLTS-DQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRL 324 (1075)
Q Consensus 247 ~~~~~i~~v~Q~~~~~~-~tv~~ni~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl 324 (1075)
.+++.++|+||++.++. .|++||+.++... .........+++.++++.+++.+..++.+ .+||||||||+
T Consensus 82 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~Gq~qrv 153 (250)
T PRK11264 82 QLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYP--------RRLSGGQQQRV 153 (250)
T ss_pred HhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhCCh--------hhCChHHHHHH
Confidence 13457999999998775 6999999764211 11111112345677889999987766655 68999999999
Q ss_pred HHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 325 GMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 325 ~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
+|||||+.+|+++||||||++||+.++..+.+.+++ .|.|+|++||+++.+. .||++++|++
T Consensus 154 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~ 219 (250)
T PRK11264 154 AIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQ 219 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 999999999999999999999999999999887754 4889999999999885 6999999986
No 275
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=8e-37 Score=326.34 Aligned_cols=202 Identities=21% Similarity=0.252 Sum_probs=162.8
Q ss_pred eEEeeeeeeCCCc---cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccC-----Cc
Q 001446 837 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAG-----SG 908 (1075)
Q Consensus 837 I~f~~V~~~yp~~---~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~-----~r 908 (1075)
|+++||++.|++. .++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++...+. .|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 6899999999752 479999999999999999999999999999999999999999999999998876521 12
Q ss_pred -CcEEEEcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccc
Q 001446 909 -CGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 986 (1075)
Q Consensus 909 -~~i~~VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~ 986 (1075)
.+++||||+|.+|. .|+++|+.++.... ... .....+.+.++++.+++.+.....
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~----------~~~------~~~~~~~~~~~l~~~~l~~~~~~~------- 138 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIG----------KKS------VKEAKERAYEMLEKVGLEHRINHR------- 138 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhc----------CCC------HHHHHHHHHHHHHHcCChhhhhCC-------
Confidence 56999999999986 59999997531100 000 000123355667777765433222
Q ss_pred cccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCchhhccceEEEE
Q 001446 987 LNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRLI 1062 (1075)
Q Consensus 987 ~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i~~~~~~l~l~ 1062 (1075)
...||||||||++||||++++|+||||||||++||.++...+.+.+++ .++|+|+|+|+++.+...|+++.|.
T Consensus 139 ---~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~ 215 (221)
T TIGR02211 139 ---PSELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMK 215 (221)
T ss_pred ---hhhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEe
Confidence 346999999999999999999999999999999999999888776642 3799999999999888889999997
Q ss_pred cC
Q 001446 1063 DG 1064 (1075)
Q Consensus 1063 ~g 1064 (1075)
+|
T Consensus 216 ~G 217 (221)
T TIGR02211 216 DG 217 (221)
T ss_pred CC
Confidence 65
No 276
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-36 Score=331.89 Aligned_cols=199 Identities=20% Similarity=0.206 Sum_probs=165.7
Q ss_pred CccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCC-----CCccEEEeCCcCc-------
Q 001446 179 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS------- 246 (1075)
Q Consensus 179 ~~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~------- 246 (1075)
.+.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.+.
T Consensus 11 ~~~l~~~~l~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~ 89 (260)
T PRK10744 11 PSKIQVRNLNFYYG-KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDI 89 (260)
T ss_pred CceEEEEEEEEEeC-CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccch
Confidence 35799999999996 4579999999999999999999999999999999999986 5899999998541
Q ss_pred -cccccEEEEcCCCCCCcCCHHHHhcCCCCCC-cccCcCCHHHHHHHHHHcCChh----HHhcCCCCcccCCCCCCChhH
Q 001446 247 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSD-QEVEPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGE 320 (1075)
Q Consensus 247 -~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGq 320 (1075)
.++++++|+||++.++..|+++|+.++.... .......++++.++++.+++.. ..++.+ .+|||||
T Consensus 90 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LS~Gq 161 (260)
T PRK10744 90 ALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKDKLHQSG--------YSLSGGQ 161 (260)
T ss_pred HHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHHHHhcCC--------CCCCHHH
Confidence 2356799999999888899999998753211 1111112345778899988743 344433 6899999
Q ss_pred HHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 321 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 321 kqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
|||++|||||+.+|+++||||||++||+.+++.+.+.+++ .+.|+|++||+++.+ ..+|++++|++
T Consensus 162 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 230 (260)
T PRK10744 162 QQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYL 230 (260)
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999888865 368999999999987 47999999986
No 277
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-36 Score=329.93 Aligned_cols=197 Identities=25% Similarity=0.354 Sum_probs=166.4
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc------------cc
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------------DL 248 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~------------~~ 248 (1075)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+- ..
T Consensus 2 ~l~~~~l~~~~~-~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (242)
T PRK11124 2 SIQLNGINCFYG-AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIREL 80 (242)
T ss_pred EEEEEeeEEEEC-CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHH
Confidence 478999999996 46799999999999999999999999999999999999999999999998631 13
Q ss_pred cccEEEEcCCCCCCc-CCHHHHhcCCC-CCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHH
Q 001446 249 NKEIFYVPQRPYTAV-GTLRDQLIYPL-TSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 326 (1075)
Q Consensus 249 ~~~i~~v~Q~~~~~~-~tv~~ni~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~l 326 (1075)
++.++|+||+|.++. .|+.||+.+.. ............++.++++.+++.+..++.+ .+||||||||++|
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~~qrv~l 152 (242)
T PRK11124 81 RRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADRFP--------LHLSGGQQQRVAI 152 (242)
T ss_pred HhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh--------hhCCHHHHHHHHH
Confidence 457999999998876 49999997421 1100001112345678899999988888776 6899999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 327 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 327 Aral~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|||++.+|+++||||||++||+.+...+.+.+++ .|+|+|++||+.+.+. .+|++++|++
T Consensus 153 aral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~ 216 (242)
T PRK11124 153 ARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMEN 216 (242)
T ss_pred HHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 9999999999999999999999999999887764 4899999999999885 6999999985
No 278
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-37 Score=332.54 Aligned_cols=198 Identities=22% Similarity=0.264 Sum_probs=164.6
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCC-----CCccEEEeCCcCc--------
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS-------- 246 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~-------- 246 (1075)
+.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.+.
T Consensus 5 ~~l~~~~l~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 5 PKMEARGLSFFYG-DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred cEEEEeeeEEEEC-CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 4699999999996 4579999999999999999999999999999999999974 6899999998541
Q ss_pred cccccEEEEcCCCCCCcCCHHHHhcCCCCCCccc-CcCCHHHHHHHHHHcCChhH----HhcCCCCcccCCCCCCChhHH
Q 001446 247 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQ 321 (1075)
Q Consensus 247 ~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~g~~LSgGqk 321 (1075)
.+++.++|+||++.++..|++||+.++....... .....+++.++++.+++.+. .++.+ .+||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LSgGq~ 155 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKDRLHESA--------LGLSGGQQ 155 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCc--------ccCCHHHH
Confidence 2356799999999888889999998753211110 11123456778888888542 33333 68999999
Q ss_pred HHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 322 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 322 qRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
||++|||||+.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+ ..||++++|++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~ 223 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYM 223 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999888764 378999999999987 57999999986
No 279
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-37 Score=340.04 Aligned_cols=203 Identities=22% Similarity=0.242 Sum_probs=164.5
Q ss_pred eEEeeeeeeCCCc----cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc----CCc
Q 001446 837 ISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA----GSG 908 (1075)
Q Consensus 837 I~f~~V~~~yp~~----~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~----~~r 908 (1075)
|+++||++.|++. +++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+++... ..|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 7899999999752 47999999999999999999999999999999999999999999999999987532 345
Q ss_pred CcEEEEcCCC--CCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCch--hhhhhhccCCc
Q 001446 909 CGIFYVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS--YLLEREEVGWD 984 (1075)
Q Consensus 909 ~~i~~VpQdP--~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~--~~i~~~~~Gld 984 (1075)
.+++||||+| .+|..|+++||.++.... +.. .....+.+.++++.++|. ++..+
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~----------~~~------~~~~~~~~~~~l~~~gL~~~~~~~~------ 140 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINL----------GLS------EEEIENRVKRAMNIVGLDYEDYKDK------ 140 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHC----------CCC------HHHHHHHHHHHHHHcCCCchhhccC------
Confidence 6899999998 578899999997632100 000 000123455677777774 22211
Q ss_pred cccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCch-hhccceE
Q 001446 985 ANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLEL 1059 (1075)
Q Consensus 985 t~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i-~~~~~~l 1059 (1075)
....||||||||++|||||+.+|++|||||||++||+.+...+.+++++ .+.|||+|+|+++.+ ++.|+++
T Consensus 141 ----~~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 141 ----SPFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred ----CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEE
Confidence 2357999999999999999999999999999999999999888776643 389999999999865 7899999
Q ss_pred EEEcCC
Q 001446 1060 RLIDGE 1065 (1075)
Q Consensus 1060 ~l~~g~ 1065 (1075)
.|.+|.
T Consensus 217 ~l~~G~ 222 (287)
T PRK13637 217 VMNKGK 222 (287)
T ss_pred EEECCE
Confidence 998775
No 280
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=7.1e-37 Score=327.80 Aligned_cols=207 Identities=25% Similarity=0.365 Sum_probs=166.8
Q ss_pred CCceEEeeeeeeCCCc--cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcC
Q 001446 834 QDSISFSKLDIITPSQ--KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGC 909 (1075)
Q Consensus 834 ~g~I~f~~V~~~yp~~--~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~ 909 (1075)
.|.|+++|+++.|++. .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++...+ ..+.
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 5789999999999753 47999999999999999999999999999999999999999999999999887642 3456
Q ss_pred cEEEEcCCCCCCCcchhhhhcCCCCh--HHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc
Q 001446 910 GIFYVPQRPYTCLGTLRDQIIYPLSR--EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 987 (1075)
Q Consensus 910 ~i~~VpQdP~Lf~gTir~NL~~p~~~--~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 987 (1075)
+++|+||+|.+|.+|+++|+.++... .++..+. .+..++...++..+.|+++..
T Consensus 89 ~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~------------------------~~~~~~~~~l~~l~~gl~~~~ 144 (226)
T cd03248 89 KVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEA------------------------AQKAHAHSFISELASGYDTEV 144 (226)
T ss_pred hEEEEecccHHHhhhHHHHhccccCCCCHHHHHHH------------------------HHHcCcHHHHHhccccccchh
Confidence 79999999999999999999864321 1111111 111122223333333444433
Q ss_pred -ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcC
Q 001446 988 -NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDG 1064 (1075)
Q Consensus 988 -~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g 1064 (1075)
.....||||||||++||||++++|++|||||||++||.++...+.+.+++ .++|+|+|+|+++.+...|+++.|.+|
T Consensus 145 ~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g 224 (226)
T cd03248 145 GEKGSQLSGGQKQRVAIARALIRNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGG 224 (226)
T ss_pred hcCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCC
Confidence 23567999999999999999999999999999999999999988877654 368999999999988999999999655
No 281
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.4e-36 Score=318.95 Aligned_cols=186 Identities=26% Similarity=0.393 Sum_probs=158.7
Q ss_pred CccEEEEeEEEEcCCC-CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------cccccc
Q 001446 179 ANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKE 251 (1075)
Q Consensus 179 ~~~i~~~~v~~~~~~~-~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~ 251 (1075)
.+.++++|+++.|++. .++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.
T Consensus 4 ~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 4 HGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 3569999999999753 479999999999999999999999999999999999999999999999864 124568
Q ss_pred EEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHc
Q 001446 252 IFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 252 i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~ 331 (1075)
++|+||+|.++.+|+++|+.+... ...+++.+.++ .++. ...||||||||++||||++
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~~-------~~~~~~~~~l~-------~~~~--------~~~LS~G~~qrv~laral~ 141 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFDE-------YSDEEIYGALR-------VSEG--------GLNLSQGQRQLLCLARALL 141 (207)
T ss_pred EEEEecCCcccCccHHHHhcccCC-------CCHHHHHHHhh-------ccCC--------CCcCCHHHHHHHHHHHHHh
Confidence 999999999988999999975321 12233334443 2222 3689999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
.+|+++||||||++||+.+...+.+.+++ .++|+|++||+.+.+..+|++++|++
T Consensus 142 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~ 198 (207)
T cd03369 142 KRPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDA 198 (207)
T ss_pred hCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEEC
Confidence 99999999999999999999999988875 37899999999999878999999986
No 282
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-37 Score=336.48 Aligned_cols=204 Identities=20% Similarity=0.291 Sum_probs=167.5
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEEE
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFY 913 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~~ 913 (1075)
-|+++||++.|++..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .++.+++|
T Consensus 4 ~l~~~~l~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 83 (274)
T PRK13647 4 IIEVEDLHFRYKDGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVGL 83 (274)
T ss_pred eEEEEEEEEEeCCCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEEE
Confidence 4899999999986567999999999999999999999999999999999999999999999999887542 34567999
Q ss_pred EcCCC--CCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccccccc
Q 001446 914 VPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 991 (1075)
Q Consensus 914 VpQdP--~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~ 991 (1075)
|||+| .+|..|+++|+.++.... +.. ....+..+.++++.++|.....+. ..
T Consensus 84 v~q~~~~~~~~~tv~e~l~~~~~~~----------~~~------~~~~~~~~~~~l~~~~L~~~~~~~----------~~ 137 (274)
T PRK13647 84 VFQDPDDQVFSSTVWDDVAFGPVNM----------GLD------KDEVERRVEEALKAVRMWDFRDKP----------PY 137 (274)
T ss_pred EecChhhhhccCcHHHHHHhhHHHc----------CCC------HHHHHHHHHHHHHHCCCHHHhcCC----------hh
Confidence 99999 688899999998642100 000 000123456677888875544333 24
Q ss_pred CCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 992 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 992 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
.||||||||++|||||+++|++|||||||++||..+...+.+++++ .++|+|+|+|+++.+ ++.|+++.|.+|.
T Consensus 138 ~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~ 215 (274)
T PRK13647 138 HLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGR 215 (274)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999887776643 489999999999876 7999999998776
No 283
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3.9e-37 Score=327.99 Aligned_cols=203 Identities=23% Similarity=0.280 Sum_probs=164.5
Q ss_pred eEEeeeeeeCCCc---cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc-cCCcCcEE
Q 001446 837 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIF 912 (1075)
Q Consensus 837 I~f~~V~~~yp~~---~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~-~~~r~~i~ 912 (1075)
|+++||++.|++. +++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.++|.++... ...|.+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 81 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLG 81 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEE
Confidence 6899999999753 2799999999999999999999999999999999999999999999999988653 23456799
Q ss_pred EEcCCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccccccc
Q 001446 913 YVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 991 (1075)
Q Consensus 913 ~VpQdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~ 991 (1075)
|+||+|.+|.+ |+++|+.++... .+. .....++.+.++++.+++.+..... ..
T Consensus 82 ~~~q~~~~~~~~tv~e~l~~~~~~----------~~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~ 135 (218)
T cd03266 82 FVSDSTGLYDRLTARENLEYFAGL----------YGL------KGDELTARLEELADRLGMEELLDRR----------VG 135 (218)
T ss_pred EecCCcccCcCCCHHHHHHHHHHH----------cCC------CHHHHHHHHHHHHHHcCCHHHHhhh----------hh
Confidence 99999999985 999999753110 000 0000123456677777775544332 34
Q ss_pred CCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCc-hhhccceEEEEcCC
Q 001446 992 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPAL-IPFHSLELRLIDGE 1065 (1075)
Q Consensus 992 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~-i~~~~~~l~l~~g~ 1065 (1075)
.||||||||++||||++++|+||||||||++||..+.+.+.+.+++ .++|+|+|+|++.. .++.|+++.+.+|.
T Consensus 136 ~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 213 (218)
T cd03266 136 GFSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGR 213 (218)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 6999999999999999999999999999999999999888777643 48999999999975 56899999997664
No 284
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.6e-37 Score=331.75 Aligned_cols=211 Identities=26% Similarity=0.296 Sum_probs=166.0
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc-----CCcCcE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCGI 911 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~-----~~r~~i 911 (1075)
|+++||+++|++..++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++...+ ..+.++
T Consensus 1 l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 80 (241)
T cd03256 1 IEVENLSKTYPNGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQI 80 (241)
T ss_pred CEEeeEEEecCCccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhcc
Confidence 478999999975467999999999999999999999999999999999999999999999999887542 235679
Q ss_pred EEEcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccc
Q 001446 912 FYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 990 (1075)
Q Consensus 912 ~~VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 990 (1075)
+||||+|.+|. .|+++|+.++........... .+. .....++.+.++++.+++...... ..
T Consensus 81 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~l~~~~l~~~~~~----------~~ 142 (241)
T cd03256 81 GMIFQQFNLIERLSVLENVLSGRLGRRSTWRSL--FGL------FPKEEKQRALAALERVGLLDKAYQ----------RA 142 (241)
T ss_pred EEEcccCcccccCcHHHHHHhhhcccchhhhhh--ccc------CcHHHHHHHHHHHHHcCChhhhCC----------Cc
Confidence 99999999887 699999976432100000000 000 000113445667777777543322 13
Q ss_pred cCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCchh-hccceEEEEcCC
Q 001446 991 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIP-FHSLELRLIDGE 1065 (1075)
Q Consensus 991 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i~-~~~~~l~l~~g~ 1065 (1075)
..||||||||++||||++++|+|||||||||+||..+...+.+.+++ .++|+|+|+|+++.+. +.|+++.|.+|.
T Consensus 143 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~ 222 (241)
T cd03256 143 DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGR 222 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 57999999999999999999999999999999999999888776643 3899999999998776 899999997765
No 285
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-37 Score=318.84 Aligned_cols=192 Identities=27% Similarity=0.328 Sum_probs=167.2
Q ss_pred eeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------c---c-ccccEEEEcCCCCCC-cCC
Q 001446 197 LVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------S---D-LNKEIFYVPQRPYTA-VGT 265 (1075)
Q Consensus 197 ~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~---~-~~~~i~~v~Q~~~~~-~~t 265 (1075)
-++|+||+++.||+..|+|-||||||||+|++.++++|++|+|.++|.+ . + .++++++|||+.-++ ..|
T Consensus 43 Gv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrt 122 (386)
T COG4175 43 GVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRT 122 (386)
T ss_pred eeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchh
Confidence 4789999999999999999999999999999999999999999999975 1 1 246899999998765 469
Q ss_pred HHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCC
Q 001446 266 LRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSA 345 (1075)
Q Consensus 266 v~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~illLDEpts~ 345 (1075)
|.||..||+...........++..+.|+.+||+.+.+++| .+||||+||||.|||||..+|+|||||||+||
T Consensus 123 Vl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp--------~eLSGGMqQRVGLARAla~~~~IlLMDEaFSA 194 (386)
T COG4175 123 VLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYP--------NELSGGMQQRVGLARALANDPDILLMDEAFSA 194 (386)
T ss_pred HhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCc--------ccccchHHHHHHHHHHHccCCCEEEecCchhh
Confidence 9999999988766555556678889999999999999999 69999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHH----hcCCeEEEEecChhhH-hhCCeEEEEcCCCcEEEecCCCC
Q 001446 346 VTTDMEERFCAKVR----AMGTSCITISHRPALV-AFHDVVLSLDGEGEWRVHDKRDG 398 (1075)
Q Consensus 346 LD~~~~~~i~~~l~----~~~~t~i~vtH~~~~~-~~~d~i~~l~~~g~~~~~~~~~~ 398 (1075)
|||--+.++.+.|. +.++|+|+||||++.. +..|||..|++ |.+++.++..
T Consensus 195 LDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~rIaimkd--G~ivQ~Gtp~ 250 (386)
T COG4175 195 LDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDRIAIMKD--GEIVQVGTPE 250 (386)
T ss_pred cChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccceEEEecC--CeEEEeCCHH
Confidence 99998888877653 4589999999999875 78999999986 3455544443
No 286
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-36 Score=324.67 Aligned_cols=194 Identities=21% Similarity=0.317 Sum_probs=164.8
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc----cccccEEEEcC
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVPQ 257 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~----~~~~~i~~v~Q 257 (1075)
++++||++.|++ .. .|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|+||
T Consensus 2 l~~~~l~~~~~~-~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 78 (232)
T PRK10771 2 LKLTDITWLYHH-LP--MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPVSMLFQ 78 (232)
T ss_pred eEEEEEEEEECC-cc--ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccEEEEec
Confidence 789999999963 32 399999999999999999999999999999999999999999998641 12457999999
Q ss_pred CCCCCcC-CHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCE
Q 001446 258 RPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 336 (1075)
Q Consensus 258 ~~~~~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~i 336 (1075)
++.++.. |+.||+.++...........++++.++++.+++.+..++.| ..||||||||++||||++++|++
T Consensus 79 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~~~p~l 150 (232)
T PRK10771 79 ENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP--------GQLSGGQRQRVALARCLVREQPI 150 (232)
T ss_pred ccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc--------ccCCHHHHHHHHHHHHHhcCCCE
Confidence 9988774 99999987632110011123456788999999998888877 68999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 337 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 337 llLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
+||||||++||+.+++.+.+.+++ .|+|+|++||+++.+. .+|++++|++
T Consensus 151 llLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 205 (232)
T PRK10771 151 LLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVAD 205 (232)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 999999999999999998887753 3789999999999875 6999999985
No 287
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=5.5e-37 Score=324.20 Aligned_cols=198 Identities=24% Similarity=0.261 Sum_probs=163.7
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEcC
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 916 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~VpQ 916 (1075)
|+++||++.|++ .++|+|+||+|++||.++|+|+||||||||+++|.|+.+|++|+|.++|.++......+.+++||||
T Consensus 1 l~~~~l~~~~~~-~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 79 (208)
T cd03268 1 LKTNDLTKTYGK-KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGALIE 79 (208)
T ss_pred CEEEEEEEEECC-eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEecC
Confidence 578999999964 5799999999999999999999999999999999999999999999999988654334567999999
Q ss_pred CCCCC-CcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCCh
Q 001446 917 RPYTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 995 (1075)
Q Consensus 917 dP~Lf-~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 995 (1075)
+|.+| ..|+++|+.++... .+ ..+..+.++++.+++.+..... ...|||
T Consensus 80 ~~~~~~~~tv~e~l~~~~~~----------~~----------~~~~~~~~~l~~~~l~~~~~~~----------~~~LS~ 129 (208)
T cd03268 80 APGFYPNLTARENLRLLARL----------LG----------IRKKRIDEVLDVVGLKDSAKKK----------VKGFSL 129 (208)
T ss_pred CCccCccCcHHHHHHHHHHh----------cC----------CcHHHHHHHHHHcCCHHHHhhh----------HhhCCH
Confidence 99888 47999999753210 00 0134456677777775544332 346999
Q ss_pred hHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 996 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 996 GQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
|||||++||||++++|++|||||||++||.++...+.+.+++ .++|+|+|+|++..+ ++.|+++.|.+|.
T Consensus 130 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~ 203 (208)
T cd03268 130 GMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGK 203 (208)
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 999999999999999999999999999999999888776643 489999999999866 6899999997653
No 288
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-36 Score=331.44 Aligned_cols=198 Identities=23% Similarity=0.257 Sum_probs=164.6
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCC-----CccEEEeCCcCc--------
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS-------- 246 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~-------- 246 (1075)
..++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+.
T Consensus 6 ~~l~~~~l~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 6 AIIETENLNLFYT-DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred ceEEEeeeEEEeC-CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 4799999999996 46799999999999999999999999999999999999997 489999998541
Q ss_pred cccccEEEEcCCCCCCcCCHHHHhcCCCCCCccc-CcCCHHHHHHHHHHcCCh----hHHhcCCCCcccCCCCCCChhHH
Q 001446 247 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLE----YLLDRYPPEKEINWGDELSLGEQ 321 (1075)
Q Consensus 247 ~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~----~~~~~~~~~~~~~~g~~LSgGqk 321 (1075)
..++.++|+||++.++..|++||+.++....... ....++++.++++.+++. +..++.+ .+||||||
T Consensus 85 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~--------~~LSgG~~ 156 (254)
T PRK14273 85 ELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLNTNA--------LSLSGGQQ 156 (254)
T ss_pred HHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhCCc--------ccCCHHHH
Confidence 2356799999999888889999998764221110 111234567788888874 2334433 68999999
Q ss_pred HHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 322 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 322 qRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
||++|||||+.+|+++||||||++||+.+...+++.+++ .+.|+|++||+++.+ ..+|++++|++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~ 224 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLN 224 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999888765 368999999999987 46999999986
No 289
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2e-36 Score=326.95 Aligned_cols=200 Identities=28% Similarity=0.440 Sum_probs=168.1
Q ss_pred EEEEeEEEEcCC--CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc------cccccEE
Q 001446 182 IEFSGVKVVTPT--GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DLNKEIF 253 (1075)
Q Consensus 182 i~~~~v~~~~~~--~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~~~~~i~ 253 (1075)
++++|+++.|++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 468999999964 35799999999999999999999999999999999999999999999998541 2345799
Q ss_pred EEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcc---cCCCCCCChhHHHHHHHHHHH
Q 001446 254 YVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKE---INWGDELSLGEQQRLGMARLF 330 (1075)
Q Consensus 254 ~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~---~~~g~~LSgGqkqRl~lAral 330 (1075)
|+||++.++..|++||+.++.... ...++.+.++.+++.++.+.+|.+.. .....+||||||||++|||||
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al 154 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDA------TDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARAL 154 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCC------CHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHH
Confidence 999999888889999998864321 22345566777788777766653221 123478999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcCC
Q 001446 331 YHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGE 387 (1075)
Q Consensus 331 ~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~~ 387 (1075)
+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+..||++++|+++
T Consensus 155 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G 213 (238)
T cd03249 155 LRNPKILLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNG 213 (238)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECC
Confidence 999999999999999999999999988764 478999999999998899999999863
No 290
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-36 Score=339.03 Aligned_cols=199 Identities=25% Similarity=0.336 Sum_probs=166.2
Q ss_pred ccEEEEeEEEEcCC---------CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc----
Q 001446 180 NYIEFSGVKVVTPT---------GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---- 246 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~---------~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~---- 246 (1075)
..|+++|+++.|+. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+.
T Consensus 4 ~~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~ 83 (327)
T PRK11308 4 PLLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKAD 83 (327)
T ss_pred ceEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCC
Confidence 36899999999863 24799999999999999999999999999999999999999999999999641
Q ss_pred -----cccccEEEEcCCCC--CCc-CCHHHHhcCCCCCC-cccCcCCHHHHHHHHHHcCCh-hHHhcCCCCcccCCCCCC
Q 001446 247 -----DLNKEIFYVPQRPY--TAV-GTLRDQLIYPLTSD-QEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDEL 316 (1075)
Q Consensus 247 -----~~~~~i~~v~Q~~~--~~~-~tv~~ni~~~~~~~-~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~L 316 (1075)
.++++|+||||+|. +.. .|+.+++..+.... ........+++.++++.++|. ...+++| .+|
T Consensus 84 ~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p--------~~L 155 (327)
T PRK11308 84 PEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPEHYDRYP--------HMF 155 (327)
T ss_pred HHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHHhcCCC--------ccC
Confidence 23568999999994 333 59999886542211 111112335678899999996 4667776 689
Q ss_pred ChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 317 SLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 317 SgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|||||||++|||||+.+|++||+||||++||..+...+++.+++ .|.|+|+||||++.+. .||+|++|.+
T Consensus 156 SgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~ 230 (327)
T PRK11308 156 SGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYL 230 (327)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999887753 4899999999999986 6999999986
No 291
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.3e-36 Score=331.87 Aligned_cols=198 Identities=21% Similarity=0.266 Sum_probs=167.0
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc-------------
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------------- 246 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~------------- 246 (1075)
+.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 4 ~~l~~~~l~~~~~-~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 82 (257)
T PRK10619 4 NKLNVIDLHKRYG-EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVA 82 (257)
T ss_pred ccEEEeeeEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccccc
Confidence 4699999999996 46799999999999999999999999999999999999999999999998531
Q ss_pred ------cccccEEEEcCCCCCCc-CCHHHHhcCCCC-CCcccCcCCHHHHHHHHHHcCChhHH-hcCCCCcccCCCCCCC
Q 001446 247 ------DLNKEIFYVPQRPYTAV-GTLRDQLIYPLT-SDQEVEPLTHGGMVELLKNVDLEYLL-DRYPPEKEINWGDELS 317 (1075)
Q Consensus 247 ------~~~~~i~~v~Q~~~~~~-~tv~~ni~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~~~~~~g~~LS 317 (1075)
.+++.++|+||++.++. .|++||+.++.. ..........+++.++++.+++.+.. ++.+ .+||
T Consensus 83 ~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~--------~~LS 154 (257)
T PRK10619 83 DKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYP--------VHLS 154 (257)
T ss_pred cchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhhhCCc--------ccCC
Confidence 12467999999998876 599999976421 11111112234577889999998764 5544 6899
Q ss_pred hhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 318 LGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 318 gGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
||||||++|||||+++|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+. .||+++++++
T Consensus 155 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~ 227 (257)
T PRK10619 155 GGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQ 227 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 9999999999999999999999999999999999999887654 4899999999999886 5999999986
No 292
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-37 Score=336.86 Aligned_cols=204 Identities=25% Similarity=0.328 Sum_probs=166.8
Q ss_pred ceEEeeeeeeCCC--ccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcE
Q 001446 836 SISFSKLDIITPS--QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGI 911 (1075)
Q Consensus 836 ~I~f~~V~~~yp~--~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i 911 (1075)
-|+++||+++|++ ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|.+|+|.+||.++... ..+|.++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 4899999999974 25699999999999999999999999999999999999999999999999998754 2345679
Q ss_pred EEEcCCCC--CCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccccc
Q 001446 912 FYVPQRPY--TCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNW 989 (1075)
Q Consensus 912 ~~VpQdP~--Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~ 989 (1075)
+||||+|. ++..|+++||.++.... +. .+...++.+.++++.++|.+.....
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~----------~~------~~~~~~~~~~~~l~~~gL~~~~~~~---------- 137 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENK----------GI------PHEEMKERVNEALELVGMQDFKERE---------- 137 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhC----------CC------CHHHHHHHHHHHHHHCCCHhHhhCC----------
Confidence 99999993 56779999998642100 00 0000123456778888886554433
Q ss_pred ccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 990 EDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 990 g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
...||||||||++|||||+++|++|||||||++||..+...+.+.+++ .|+|+|+|+|++..+.+.|+++.+.+|.
T Consensus 138 ~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~ 217 (279)
T PRK13650 138 PARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQ 217 (279)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCE
Confidence 246999999999999999999999999999999999999887776542 3899999999998888999999997664
No 293
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=6e-37 Score=325.15 Aligned_cols=200 Identities=27% Similarity=0.404 Sum_probs=159.5
Q ss_pred EEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEcCC
Q 001446 838 SFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQR 917 (1075)
Q Consensus 838 ~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~VpQd 917 (1075)
+++||++.|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.. .|.+++||||+
T Consensus 1 ~~~~l~~~~~~-~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~---~~~~i~~v~q~ 76 (213)
T cd03235 1 EVEDLTVSYGG-HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEK---ERKRIGYVPQR 76 (213)
T ss_pred CcccceeEECC-EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHH---HHhheEEeccc
Confidence 36789998875 569999999999999999999999999999999999999999999999998752 35579999999
Q ss_pred CCC---CCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCC
Q 001446 918 PYT---CLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 994 (1075)
Q Consensus 918 P~L---f~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 994 (1075)
|.+ |+.|+++|+.++...... .........++.+.++++.+++.+..... ...||
T Consensus 77 ~~~~~~~~~tv~e~l~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS 134 (213)
T cd03235 77 RSIDRDFPISVRDVVLMGLYGHKG------------LFRRLSKADKAKVDEALERVGLSELADRQ----------IGELS 134 (213)
T ss_pred cccccCCCCcHHHHHHhccccccc------------cccCCCHHHHHHHHHHHHHcCCHHHHhCC----------cccCC
Confidence 987 568999999764321000 00000001133456777777775443322 34699
Q ss_pred hhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCch-hhccceEEEEc
Q 001446 995 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLID 1063 (1075)
Q Consensus 995 gGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i-~~~~~~l~l~~ 1063 (1075)
||||||++|||||+++|++|||||||++||.++...+.+.+++ .++|+|+|+|+++.+ ++.|+++.|.+
T Consensus 135 gG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~ 207 (213)
T cd03235 135 GGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNR 207 (213)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcC
Confidence 9999999999999999999999999999999999887776643 579999999999866 68899999954
No 294
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=3.5e-36 Score=328.05 Aligned_cols=201 Identities=24% Similarity=0.347 Sum_probs=173.2
Q ss_pred CccEEEEeEEEEcCCC-CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------cccccc
Q 001446 179 ANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKE 251 (1075)
Q Consensus 179 ~~~i~~~~v~~~~~~~-~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~ 251 (1075)
.+.++++|+++.|++. +.+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+ ..+++.
T Consensus 17 ~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~~ 96 (257)
T cd03288 17 GGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSR 96 (257)
T ss_pred CceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhhh
Confidence 4679999999999753 579999999999999999999999999999999999999999999999864 134567
Q ss_pred EEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcc---cCCCCCCChhHHHHHHHHH
Q 001446 252 IFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKE---INWGDELSLGEQQRLGMAR 328 (1075)
Q Consensus 252 i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~---~~~g~~LSgGqkqRl~lAr 328 (1075)
++|++|+|+++.+|+++|+..... ....++.++++.+++.+.++.+|.+.. ..++.+||||||||++|||
T Consensus 97 i~~v~q~~~l~~~tv~~nl~~~~~-------~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~lar 169 (257)
T cd03288 97 LSIILQDPILFSGSIRFNLDPECK-------CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLAR 169 (257)
T ss_pred EEEECCCCcccccHHHHhcCcCCC-------CCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHH
Confidence 999999999998999999864311 123456677888888888887764322 2456799999999999999
Q ss_pred HHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 329 LFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 329 al~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
||+++|+++||||||++||+.+...+.+.+++ .+.|+|++||+++.+..||++++|++
T Consensus 170 al~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~ 229 (257)
T cd03288 170 AFVRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSR 229 (257)
T ss_pred HHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEEC
Confidence 99999999999999999999999999888765 48999999999999988999999986
No 295
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-36 Score=330.70 Aligned_cols=199 Identities=19% Similarity=0.224 Sum_probs=165.1
Q ss_pred CCccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCC-----CCccEEEeCCcCc------
Q 001446 178 EANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS------ 246 (1075)
Q Consensus 178 ~~~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~------ 246 (1075)
....++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.+.
T Consensus 10 ~~~~l~i~nl~~~~~-~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 10 KNIIISLQNVTISYG-TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred CCceEEEEeEEEEEC-CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 345799999999996 4679999999999999999999999999999999999987 6899999998531
Q ss_pred --cccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChh----HHhcCCCCcccCCCCCCChhH
Q 001446 247 --DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGE 320 (1075)
Q Consensus 247 --~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGq 320 (1075)
.+++.++|+||++.++..|++||+.++...... ....++++.++++.+++.. ..++.+ .+|||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~l~~~~~~~~--------~~LS~G~ 159 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGY-TGDMDELVERSLRKAAVWDECKDKLNESG--------YSLSGGQ 159 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCC-cHHHHHHHHHHHHHhCCcchhhhhhCCCc--------ccCCHHH
Confidence 234679999999988878999999876432111 1112345667788887643 233332 6899999
Q ss_pred HHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 321 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 321 kqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
|||++|||||+.+|+++||||||++||+.+...+.+.+++ .+.|+|++||+++.+ ..||++++|++
T Consensus 160 ~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~ 228 (269)
T PRK14259 160 QQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNA 228 (269)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEec
Confidence 9999999999999999999999999999999999988864 368999999999877 57999999985
No 296
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-36 Score=331.61 Aligned_cols=198 Identities=23% Similarity=0.260 Sum_probs=164.0
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCC-----CccEEEeCCcCc--------
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS-------- 246 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~-------- 246 (1075)
..++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+.
T Consensus 11 ~~l~~~~l~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 89 (258)
T PRK14268 11 PQIKVENLNLWYG-EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVV 89 (258)
T ss_pred eeEEEeeeEEEeC-CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHH
Confidence 4799999999985 46799999999999999999999999999999999999985 899999998541
Q ss_pred cccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChh----HHhcCCCCcccCCCCCCChhHHH
Q 001446 247 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQQ 322 (1075)
Q Consensus 247 ~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGqkq 322 (1075)
.+++.++|+||++.++..|++||+.++...........++++.++++.+++.. ..++.+ .+|||||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LSgG~~q 161 (258)
T PRK14268 90 ELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETSDRLKSPA--------LSLSGGQQQ 161 (258)
T ss_pred HHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchhhhhcCCh--------hhCCHHHHH
Confidence 23567999999998888999999987532111111111234677888888742 233332 689999999
Q ss_pred HHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 323 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 323 Rl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
|++|||||+.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+ ..||++++|++
T Consensus 162 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~ 228 (258)
T PRK14268 162 RLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLM 228 (258)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999888764 378999999999987 56999999986
No 297
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-36 Score=329.86 Aligned_cols=198 Identities=21% Similarity=0.325 Sum_probs=168.2
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 254 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 254 (1075)
+++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|
T Consensus 2 ~l~~~~l~~~~~-~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 2 TLRTENLTVGYG-TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEEeEEEEEC-CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 478999999996 4689999999999999999999999999999999999999999999999864 123457999
Q ss_pred EcCCCCCCcC-CHHHHhcCCCCCC----cccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHH
Q 001446 255 VPQRPYTAVG-TLRDQLIYPLTSD----QEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 329 (1075)
Q Consensus 255 v~Q~~~~~~~-tv~~ni~~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAra 329 (1075)
+||++.++.. |+.||+.++.... ........+++.++++.+++.+..++.+ .+||||||||++||||
T Consensus 81 ~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~lara 152 (255)
T PRK11231 81 LPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRL--------TDLSGGQRQRAFLAMV 152 (255)
T ss_pred ecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCc--------ccCCHHHHHHHHHHHH
Confidence 9999987765 9999998753210 0001122345778899999988877766 6899999999999999
Q ss_pred HcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcCC
Q 001446 330 FYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDGE 387 (1075)
Q Consensus 330 l~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~~ 387 (1075)
++.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .+|++++++++
T Consensus 153 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G 214 (255)
T PRK11231 153 LAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANG 214 (255)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECC
Confidence 9999999999999999999999999888754 4889999999999874 79999999863
No 298
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-36 Score=329.02 Aligned_cols=197 Identities=22% Similarity=0.252 Sum_probs=164.9
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCC---CCccEEEeCCcC------cccccc
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP---LVSGHIAKPGVG------SDLNKE 251 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~---~~~G~i~~~~~~------~~~~~~ 251 (1075)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|.+ ...++.
T Consensus 2 ~~~~~~l~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~ 80 (246)
T PRK14269 2 IAKTTNLNLFYG-KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKN 80 (246)
T ss_pred ceeeeeeEEEEC-CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhh
Confidence 478999999996 4679999999999999999999999999999999999974 799999999964 123567
Q ss_pred EEEEcCCCCCCcCCHHHHhcCCCCCCccc--CcCCHHHHHHHHHHcCChhH----HhcCCCCcccCCCCCCChhHHHHHH
Q 001446 252 IFYVPQRPYTAVGTLRDQLIYPLTSDQEV--EPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQQRLG 325 (1075)
Q Consensus 252 i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~g~~LSgGqkqRl~ 325 (1075)
++|+||+|.++..|++||+.++....... ....++++.++++.+++.+. .++. +.+||||||||++
T Consensus 81 i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~~LS~G~~qrv~ 152 (246)
T PRK14269 81 VGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQN--------ALALSGGQQQRLC 152 (246)
T ss_pred EEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHHhcCC--------cccCCHHHHHHHH
Confidence 99999999988899999998753221110 11223456788999999543 3332 3689999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 326 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 326 lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
|||||+++|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+ ..+|++++|++
T Consensus 153 laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~ 216 (246)
T PRK14269 153 IARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHL 216 (246)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEEC
Confidence 99999999999999999999999999999888865 489999999999977 47999999986
No 299
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.2e-36 Score=333.30 Aligned_cols=198 Identities=29% Similarity=0.369 Sum_probs=164.3
Q ss_pred cEEEEeEEEEcCC--------CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc------
Q 001446 181 YIEFSGVKVVTPT--------GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------ 246 (1075)
Q Consensus 181 ~i~~~~v~~~~~~--------~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~------ 246 (1075)
.++++||++.|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 4889999999963 36799999999999999999999999999999999999999999999998641
Q ss_pred ---cccccEEEEcCCCC--CC-cCCHHHHhcCCCCCC-cccCcCCHHHHHHHHHHcCCh-hHHhcCCCCcccCCCCCCCh
Q 001446 247 ---DLNKEIFYVPQRPY--TA-VGTLRDQLIYPLTSD-QEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSL 318 (1075)
Q Consensus 247 ---~~~~~i~~v~Q~~~--~~-~~tv~~ni~~~~~~~-~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSg 318 (1075)
.+++.|+|+||+|. ++ ..|++||+.++.... ........+++.++++.+++. ...++.+ .+|||
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~--------~~LSg 153 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSEDADKLP--------RQLSG 153 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhhCCh--------hhCCH
Confidence 13467999999983 43 469999997543211 111112235677889999996 5566654 68999
Q ss_pred hHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 319 GEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 319 GqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|||||++|||||+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 154 Ge~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~ 226 (265)
T TIGR02769 154 GQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDK 226 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeC
Confidence 999999999999999999999999999999999988887753 3899999999999886 7999999985
No 300
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1e-36 Score=323.59 Aligned_cols=202 Identities=20% Similarity=0.287 Sum_probs=163.3
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEcC
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 916 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~VpQ 916 (1075)
|+++||+++|++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|.+|+|.+||.++...+..+.+++|+||
T Consensus 1 i~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~~q 79 (213)
T cd03301 1 VELENVTKRFGN-VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMVFQ 79 (213)
T ss_pred CEEEeeEEEECC-eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEEec
Confidence 578999999875 5799999999999999999999999999999999999999999999999998765444567999999
Q ss_pred CCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCCh
Q 001446 917 RPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 995 (1075)
Q Consensus 917 dP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 995 (1075)
+|.+|. .|+++|+.++.... +. .....++.+.++++.+++.+..... ...|||
T Consensus 80 ~~~~~~~~tv~~~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS~ 133 (213)
T cd03301 80 NYALYPHMTVYDNIAFGLKLR----------KV------PKDEIDERVREVAELLQIEHLLDRK----------PKQLSG 133 (213)
T ss_pred ChhhccCCCHHHHHHHHHHhc----------CC------CHHHHHHHHHHHHHHcCCHHHHhCC----------hhhCCH
Confidence 999985 69999997642100 00 0000123455667777775443322 246999
Q ss_pred hHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 996 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 996 GQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
|||||++||||++++|+++||||||++||.++...+.+.+++ .++|+|+|+|++..+ .+.|+++.+.+|.
T Consensus 134 G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~ 208 (213)
T cd03301 134 GQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQ 208 (213)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCE
Confidence 999999999999999999999999999999999888776643 389999999999754 5789999997653
No 301
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=7.5e-37 Score=326.31 Aligned_cols=203 Identities=18% Similarity=0.238 Sum_probs=163.2
Q ss_pred eEEeeeeeeCCCc-cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc-cCCcCcEEEE
Q 001446 837 ISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYV 914 (1075)
Q Consensus 837 I~f~~V~~~yp~~-~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~-~~~r~~i~~V 914 (1075)
|+++||++.|++. +++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.++|.++... ...+.+++||
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~v 80 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGYC 80 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEEe
Confidence 5789999999753 6799999999999999999999999999999999999999999999999988653 2345679999
Q ss_pred cCCCCCC-CcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCC
Q 001446 915 PQRPYTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDIL 993 (1075)
Q Consensus 915 pQdP~Lf-~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~L 993 (1075)
||+|.+| ..|+++|+.++... .+.. ....++.+.++++.++|.+..... ...|
T Consensus 81 ~q~~~~~~~~tv~~~l~~~~~~----------~~~~------~~~~~~~~~~~l~~~~l~~~~~~~----------~~~L 134 (220)
T cd03263 81 PQFDALFDELTVREHLRFYARL----------KGLP------KSEIKEEVELLLRVLGLTDKANKR----------ARTL 134 (220)
T ss_pred cCcCCccccCCHHHHHHHHHHH----------cCCC------HHHHHHHHHHHHHHcCCHHHHhCh----------hhhC
Confidence 9999998 57999999753110 0000 000123455667777774433221 2469
Q ss_pred ChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 994 SLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 994 SgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
|+|||||++||||++++|++|||||||++||..+...+.+.+++ .++|+|+++|+++.+ ++.|+++.+.+|.
T Consensus 135 S~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 135 SGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 99999999999999999999999999999999999888777654 468999999999866 5799999997654
No 302
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.3e-36 Score=330.99 Aligned_cols=196 Identities=27% Similarity=0.351 Sum_probs=166.3
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc---------------
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------------- 246 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~--------------- 246 (1075)
|+++||++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 1 i~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ 79 (252)
T TIGR03005 1 VRFSDVTKRFG-ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPADE 79 (252)
T ss_pred CEEEEEEEEeC-CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccch
Confidence 46899999996 46899999999999999999999999999999999999999999999998531
Q ss_pred ----cccccEEEEcCCCCCCc-CCHHHHhcCCCCC-CcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhH
Q 001446 247 ----DLNKEIFYVPQRPYTAV-GTLRDQLIYPLTS-DQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGE 320 (1075)
Q Consensus 247 ----~~~~~i~~v~Q~~~~~~-~tv~~ni~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGq 320 (1075)
.+++.++|++|++.++. .|+.||+.++... ........++++.++++.+++.+..++.+ .+|||||
T Consensus 80 ~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~ 151 (252)
T TIGR03005 80 KHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADHMP--------AQLSGGQ 151 (252)
T ss_pred hHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhcCh--------hhcCHHH
Confidence 13567999999998775 6999999874211 01011112345778899999988888766 6899999
Q ss_pred HHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 321 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 321 kqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
|||++|||||+.+|+++||||||++||+.++..+.+.+++ .|+|+|++||+++.+ ..+|++++|++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~ 222 (252)
T TIGR03005 152 QQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDK 222 (252)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 9999999999999999999999999999999998887753 388999999999987 57999999986
No 303
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-36 Score=325.00 Aligned_cols=202 Identities=22% Similarity=0.226 Sum_probs=163.5
Q ss_pred eEEeeeeeeCCCc---cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEE
Q 001446 837 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFY 913 (1075)
Q Consensus 837 I~f~~V~~~yp~~---~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~ 913 (1075)
|+++|+++.|++. +++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.. .+.+++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~---~~~~i~~ 77 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG---PGPDRGY 77 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc---ccCcEEE
Confidence 5789999999752 579999999999999999999999999999999999999999999999988763 3567999
Q ss_pred EcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccC
Q 001446 914 VPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 992 (1075)
Q Consensus 914 VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~ 992 (1075)
|||+|.+|+ .|+++|+.++.... +.. ....++.+.++++.+++.+..... ...
T Consensus 78 v~q~~~~~~~~tv~e~l~~~~~~~----------~~~------~~~~~~~~~~~l~~~~l~~~~~~~----------~~~ 131 (220)
T cd03293 78 VFQQDALLPWLTVLDNVALGLELQ----------GVP------KAEARERAEELLELVGLSGFENAY----------PHQ 131 (220)
T ss_pred EecccccccCCCHHHHHHHHHHHc----------CCC------HHHHHHHHHHHHHHcCChhhhhCC----------ccc
Confidence 999999987 69999997532100 000 001123456677777775544332 246
Q ss_pred CChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCC-chhhccceEEEEcCCcc
Q 001446 993 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPA-LIPFHSLELRLIDGEGN 1067 (1075)
Q Consensus 993 LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls-~i~~~~~~l~l~~g~g~ 1067 (1075)
||||||||++|||||+++|+++||||||++||..+...+.+.+++ .++|+|+|+|+++ ..++.|+++.|.+|+|.
T Consensus 132 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 132 LSGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 999999999999999999999999999999999999888776643 3899999999998 45789999999743443
No 304
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.5e-36 Score=320.53 Aligned_cols=195 Identities=21% Similarity=0.292 Sum_probs=162.5
Q ss_pred CCCCCCCCceEEeeeeeeCCCc-cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc-
Q 001446 828 WNSTDYQDSISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA- 905 (1075)
Q Consensus 828 w~~~~~~g~I~f~~V~~~yp~~-~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~- 905 (1075)
||. .+.|+++|++++|++. .++|+|+||+|++||.++|+|++|||||||+++|.|+++|.+|+|.++|.++...+
T Consensus 1 ~~~---~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~ 77 (207)
T cd03369 1 WPE---HGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPL 77 (207)
T ss_pred CCC---CCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCH
Confidence 665 5789999999999753 57999999999999999999999999999999999999999999999999886542
Q ss_pred -CCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCc
Q 001446 906 -GSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWD 984 (1075)
Q Consensus 906 -~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gld 984 (1075)
..|.+++||||+|.+|++|+++|+.+..... +.++.++++ + +
T Consensus 78 ~~~~~~i~~v~q~~~~~~~tv~~~l~~~~~~~-----------------------~~~~~~~l~---~-----------~ 120 (207)
T cd03369 78 EDLRSSLTIIPQDPTLFSGTIRSNLDPFDEYS-----------------------DEEIYGALR---V-----------S 120 (207)
T ss_pred HHHHhhEEEEecCCcccCccHHHHhcccCCCC-----------------------HHHHHHHhh---c-----------c
Confidence 2456799999999999999999997422111 111222222 1 1
Q ss_pred cccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEE
Q 001446 985 ANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLI 1062 (1075)
Q Consensus 985 t~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~ 1062 (1075)
.+...||+|||||++||||++++|+|+||||||++||.++...+.+.+++ .++|+|+|+|+++.+...|+++.|.
T Consensus 121 ---~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~ 197 (207)
T cd03369 121 ---EGGLNLSQGQRQLLCLARALLKRPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMD 197 (207)
T ss_pred ---CCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEE
Confidence 12356999999999999999999999999999999999999888877754 4899999999999877789999997
Q ss_pred cCC
Q 001446 1063 DGE 1065 (1075)
Q Consensus 1063 ~g~ 1065 (1075)
+|.
T Consensus 198 ~g~ 200 (207)
T cd03369 198 AGE 200 (207)
T ss_pred CCE
Confidence 653
No 305
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.4e-36 Score=324.38 Aligned_cols=200 Identities=25% Similarity=0.289 Sum_probs=162.6
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc-----CCcCcE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCGI 911 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~-----~~r~~i 911 (1075)
|+++||++.|++..++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++...+ ..|.++
T Consensus 2 l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i 81 (222)
T PRK10908 2 IRFEHVSKAYLGGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQI 81 (222)
T ss_pred EEEEeeEEEecCCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhhe
Confidence 689999999965567999999999999999999999999999999999999999999999999887642 135679
Q ss_pred EEEcCCCCCC-CcchhhhhcCCCC---hHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc
Q 001446 912 FYVPQRPYTC-LGTLRDQIIYPLS---REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 987 (1075)
Q Consensus 912 ~~VpQdP~Lf-~gTir~NL~~p~~---~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 987 (1075)
+|+||+|.+| ..|+++|+.++.. ...+ ..++.+.++++.+++.....+.
T Consensus 82 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~-------------------~~~~~~~~~l~~~~l~~~~~~~-------- 134 (222)
T PRK10908 82 GMIFQDHHLLMDRTVYDNVAIPLIIAGASGD-------------------DIRRRVSAALDKVGLLDKAKNF-------- 134 (222)
T ss_pred EEEecCccccccccHHHHHHhHHHhcCCCHH-------------------HHHHHHHHHHHHcCChhhhhCC--------
Confidence 9999999874 6799999986421 0000 0122345566777765433222
Q ss_pred ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCch-hhccceEEEEc
Q 001446 988 NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLID 1063 (1075)
Q Consensus 988 ~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i-~~~~~~l~l~~ 1063 (1075)
...||+|||||++||||++++|++|||||||++||.++...+.+.+++ .+.|+|+|+|+++.+ .+.|+++.|.+
T Consensus 135 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 212 (222)
T PRK10908 135 --PIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSD 212 (222)
T ss_pred --chhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 346999999999999999999999999999999999998877766543 478999999999866 46899999976
Q ss_pred CC
Q 001446 1064 GE 1065 (1075)
Q Consensus 1064 g~ 1065 (1075)
|.
T Consensus 213 G~ 214 (222)
T PRK10908 213 GH 214 (222)
T ss_pred CE
Confidence 64
No 306
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-36 Score=330.82 Aligned_cols=199 Identities=19% Similarity=0.196 Sum_probs=165.9
Q ss_pred CccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCC-----CccEEEeCCcCc-------
Q 001446 179 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS------- 246 (1075)
Q Consensus 179 ~~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~------- 246 (1075)
.+.|+++||++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+.
T Consensus 17 ~~~l~~~nl~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~ 95 (267)
T PRK14235 17 EIKMRARDVSVFYG-EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDV 95 (267)
T ss_pred CceEEEEeEEEEEC-CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccch
Confidence 35799999999996 46799999999999999999999999999999999999975 899999998541
Q ss_pred -cccccEEEEcCCCCCCcCCHHHHhcCCCCCCcc--cCcCCHHHHHHHHHHcCChhH----HhcCCCCcccCCCCCCChh
Q 001446 247 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE--VEPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLG 319 (1075)
Q Consensus 247 -~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~g~~LSgG 319 (1075)
.+++.++|+||+|.++..|++||+.++...... ......+++.++++.+++.+. .++.+ .+||||
T Consensus 96 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LSgG 167 (267)
T PRK14235 96 VELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKDRLHEPG--------TGLSGG 167 (267)
T ss_pred HHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhHHhhCCc--------ccCCHH
Confidence 235679999999998888999999875321111 011123456788999998642 33333 689999
Q ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 320 EQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 320 qkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
||||++|||||+.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+ ..||++++|++
T Consensus 168 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~ 237 (267)
T PRK14235 168 QQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHL 237 (267)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEEC
Confidence 99999999999999999999999999999999999888864 368999999999988 56899999986
No 307
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.3e-36 Score=317.87 Aligned_cols=192 Identities=27% Similarity=0.363 Sum_probs=163.9
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----ccccccEEEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYV 255 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v 255 (1075)
+++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...+++++|+
T Consensus 1 ~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~~~~~~~~~~~ 79 (204)
T PRK13538 1 MLEARNLACERD-ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQRDEYHQDLLYL 79 (204)
T ss_pred CeEEEEEEEEEC-CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccchHHhhhheEEe
Confidence 378999999986 4679999999999999999999999999999999999999999999999854 1235679999
Q ss_pred cCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCC
Q 001446 256 PQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 334 (1075)
Q Consensus 256 ~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p 334 (1075)
+|++.++. .|++||+.++..... ....+++.++++.+++.+..++.+ ..||||||||++||||++++|
T Consensus 80 ~~~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~~qrl~la~al~~~p 148 (204)
T PRK13538 80 GHQPGIKTELTALENLRFYQRLHG---PGDDEALWEALAQVGLAGFEDVPV--------RQLSAGQQRRVALARLWLTRA 148 (204)
T ss_pred CCccccCcCCcHHHHHHHHHHhcC---ccHHHHHHHHHHHcCCHHHhhCCh--------hhcCHHHHHHHHHHHHHhcCC
Confidence 99987765 599999987542211 123456788999999988777655 689999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHhh-CCeEEEE
Q 001446 335 KFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAF-HDVVLSL 384 (1075)
Q Consensus 335 ~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~~-~d~i~~l 384 (1075)
+++||||||++||+.+.+.+.+.+++ .+.|+|++||+.+++.. .++++++
T Consensus 149 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 149 PLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 99999999999999999999887764 37899999999999854 4677665
No 308
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=8.6e-37 Score=306.07 Aligned_cols=205 Identities=20% Similarity=0.238 Sum_probs=166.4
Q ss_pred CceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc-----CCcC
Q 001446 835 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGC 909 (1075)
Q Consensus 835 g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~-----~~r~ 909 (1075)
-.|++++|+++| +++.||+||||+|++||.++|+|+||||||||++++.|++.|++|+|.++|.||..++ ..|.
T Consensus 7 ~~I~vr~v~~~f-G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir~ 85 (263)
T COG1127 7 PLIEVRGVTKSF-GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIRK 85 (263)
T ss_pred ceEEEeeeeeec-CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHHh
Confidence 369999999998 4578999999999999999999999999999999999999999999999999998872 3577
Q ss_pred cEEEEcCCCCCCCc-chhhhhcCCCCh----HHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCc
Q 001446 910 GIFYVPQRPYTCLG-TLRDQIIYPLSR----EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWD 984 (1075)
Q Consensus 910 ~i~~VpQdP~Lf~g-Tir~NL~~p~~~----~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gld 984 (1075)
+++++.|.--||+. |++||+.||... .+..+ ++.+..-|+.|||......
T Consensus 86 r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i-------------------~~lv~~KL~~VGL~~~~~~------ 140 (263)
T COG1127 86 RMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLI-------------------RELVLMKLELVGLRGAAAD------ 140 (263)
T ss_pred heeEEeeccccccccchhHhhheehHhhccCCHHHH-------------------HHHHHHHHHhcCCChhhhh------
Confidence 89999999999976 999999998532 11111 1122233566666433111
Q ss_pred cccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHH----hcCceEEEecCCCC-chhhccceE
Q 001446 985 ANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAK----DMGITFVTSSQRPA-LIPFHSLEL 1059 (1075)
Q Consensus 985 t~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~----~~~~TvI~IaHRls-~i~~~~~~l 1059 (1075)
-..+.||||.|.|.||||||.-+|+||++|||||+||+-+-..+.++++ ..+.|+|+|+|.+. +....|++.
T Consensus 141 ---~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~ 217 (263)
T COG1127 141 ---LYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVA 217 (263)
T ss_pred ---hCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEE
Confidence 1246799999999999999999999999999999999987665555443 35999999999995 667889999
Q ss_pred EEEcCCcce
Q 001446 1060 RLIDGEGNW 1068 (1075)
Q Consensus 1060 ~l~~g~g~~ 1068 (1075)
.+.||+=-|
T Consensus 218 ~L~~gkv~~ 226 (263)
T COG1127 218 VLADGKVIA 226 (263)
T ss_pred EEeCCEEEE
Confidence 998776433
No 309
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=3.1e-36 Score=315.93 Aligned_cols=188 Identities=27% Similarity=0.404 Sum_probs=162.3
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----ccccccEEEEc
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYVP 256 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v~ 256 (1075)
++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++++++|+|
T Consensus 1 l~i~~l~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (201)
T cd03231 1 LEADELTCERD-GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQRDSIARGLLYLG 79 (201)
T ss_pred CEEEEEEEEeC-CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccccHHhhhheEEec
Confidence 46899999985 4679999999999999999999999999999999999999999999999854 22456899999
Q ss_pred CCCCCC-cCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCC
Q 001446 257 QRPYTA-VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 335 (1075)
Q Consensus 257 Q~~~~~-~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~ 335 (1075)
|++.++ ..|++||+.+.... ..++++.++++.+++.+..++.+ .+||||||||++||||++.+|+
T Consensus 80 q~~~~~~~~tv~e~l~~~~~~------~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~laral~~~p~ 145 (201)
T cd03231 80 HAPGIKTTLSVLENLRFWHAD------HSDEQVEEALARVGLNGFEDRPV--------AQLSAGQQRRVALARLLLSGRP 145 (201)
T ss_pred cccccCCCcCHHHHHHhhccc------ccHHHHHHHHHHcCChhhhcCch--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 999775 47999999875321 13566788999999987776654 6899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhh-HhhCCeEEEE
Q 001446 336 FAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPAL-VAFHDVVLSL 384 (1075)
Q Consensus 336 illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~-~~~~d~i~~l 384 (1075)
++||||||++||+.+.+.+.+.+++ .|.|+|++||+... ...+++++++
T Consensus 146 llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 146 LWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 9999999999999999999988764 48999999998664 4678888876
No 310
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-36 Score=330.46 Aligned_cols=198 Identities=21% Similarity=0.252 Sum_probs=168.1
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEE
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIF 253 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~ 253 (1075)
..|+++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++
T Consensus 6 ~~l~i~~l~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (265)
T PRK10253 6 ARLRGEQLTLGYG-KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRIG 84 (265)
T ss_pred cEEEEEEEEEEEC-CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhheE
Confidence 4699999999996 4679999999999999999999999999999999999999999999999864 12345799
Q ss_pred EEcCCCCCCc-CCHHHHhcCCCCCCc----ccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHH
Q 001446 254 YVPQRPYTAV-GTLRDQLIYPLTSDQ----EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMAR 328 (1075)
Q Consensus 254 ~v~Q~~~~~~-~tv~~ni~~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAr 328 (1075)
|+||++.++. .|++||+.++..... ........++.++++.+++.+..++.+ .+||||||||++|||
T Consensus 85 ~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~Gq~qrv~lar 156 (265)
T PRK10253 85 LLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSV--------DTLSGGQRQRAWIAM 156 (265)
T ss_pred EeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc--------ccCChHHHHHHHHHH
Confidence 9999998765 699999987532110 001112345778999999988877766 689999999999999
Q ss_pred HHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 329 LFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 329 al~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
|++.+|+++||||||++||+.+.+.+.+.+++ .|.|+|++||+++.+ ..||++++|++
T Consensus 157 al~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~ 219 (265)
T PRK10253 157 VLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALRE 219 (265)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999887754 378999999999876 57999999986
No 311
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=2.6e-36 Score=308.47 Aligned_cols=160 Identities=34% Similarity=0.590 Sum_probs=145.7
Q ss_pred EEEEeEEEEcCCC-CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEE
Q 001446 182 IEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 254 (1075)
Q Consensus 182 i~~~~v~~~~~~~-~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 254 (1075)
++++|+++.|+++ +++++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..++++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 4689999999743 469999999999999999999999999999999999999999999999854 124568999
Q ss_pred EcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCC
Q 001446 255 VPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 334 (1075)
Q Consensus 255 v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p 334 (1075)
++|+|.++..|++||+ ||||||||++||||++.+|
T Consensus 81 ~~q~~~~~~~tv~~~l---------------------------------------------LS~G~~qrv~la~al~~~p 115 (173)
T cd03246 81 LPQDDELFSGSIAENI---------------------------------------------LSGGQRQRLGLARALYGNP 115 (173)
T ss_pred ECCCCccccCcHHHHC---------------------------------------------cCHHHHHHHHHHHHHhcCC
Confidence 9999988888999887 8999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 335 KFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 335 ~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
+++||||||++||+.++..+.+.+++ .|+|+|++||+.+.+..||++++|++
T Consensus 116 ~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~ 170 (173)
T cd03246 116 RILVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLED 170 (173)
T ss_pred CEEEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEEC
Confidence 99999999999999999999887754 47899999999999889999999985
No 312
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.5e-36 Score=326.10 Aligned_cols=193 Identities=25% Similarity=0.356 Sum_probs=161.6
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc-------cccccEEE
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIFY 254 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~-------~~~~~i~~ 254 (1075)
|+++||++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|
T Consensus 1 l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (230)
T TIGR03410 1 LEVSNLNVYYG-QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIAY 79 (230)
T ss_pred CEEEeEEEEeC-CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeEE
Confidence 46899999996 46899999999999999999999999999999999999999999999998541 12457999
Q ss_pred EcCCCCCCcC-CHHHHhcCCCCCCcccCcCCHHHHHHHHHHcC-ChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcC
Q 001446 255 VPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVD-LEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 332 (1075)
Q Consensus 255 v~Q~~~~~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~-l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~ 332 (1075)
+||++.++.. |+++|+.++...... ...+...++++.++ +.+..++.+ .+||||||||++|||||++
T Consensus 80 ~~q~~~~~~~~tv~~~l~~~~~~~~~---~~~~~~~~~l~~~~~l~~~~~~~~--------~~LS~G~~qrv~la~al~~ 148 (230)
T TIGR03410 80 VPQGREIFPRLTVEENLLTGLAALPR---RSRKIPDEIYELFPVLKEMLGRRG--------GDLSGGQQQQLAIARALVT 148 (230)
T ss_pred eccCCcccCCCcHHHHHHHHHHhcCc---chHHHHHHHHHHHHhHHHHhhCCh--------hhCCHHHHHHHHHHHHHhc
Confidence 9999988775 999999875322111 11233456677766 455555554 6899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 333 KPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 333 ~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
+|+++||||||++||+.+...+.+.+.+ .++|+|++||+++.+. .||+++++++
T Consensus 149 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~ 207 (230)
T TIGR03410 149 RPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMER 207 (230)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999887764 3789999999999886 6999999986
No 313
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-36 Score=326.67 Aligned_cols=197 Identities=23% Similarity=0.302 Sum_probs=165.5
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc------c-ccccEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D-LNKEIF 253 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~-~~~~i~ 253 (1075)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .++.++
T Consensus 3 ~l~~~~l~~~~~-~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 81 (241)
T PRK10895 3 TLTAKNLAKAYK-GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIG 81 (241)
T ss_pred eEEEeCcEEEeC-CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCeE
Confidence 588999999996 46899999999999999999999999999999999999999999999998541 1 346799
Q ss_pred EEcCCCCCCc-CCHHHHhcCCCCCCc-ccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHc
Q 001446 254 YVPQRPYTAV-GTLRDQLIYPLTSDQ-EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 254 ~v~Q~~~~~~-~tv~~ni~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~ 331 (1075)
|+||++.++. .|++||+.+...... ........++.++++.+++.+..++.+ .+||||||||++||||++
T Consensus 82 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~ 153 (241)
T PRK10895 82 YLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMG--------QSLSGGERRRVEIARALA 153 (241)
T ss_pred EeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHHHhhcch--------hhCCHHHHHHHHHHHHHh
Confidence 9999998776 599999987532211 011112345778899999987766654 689999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHH---hcCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKVR---AMGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l~---~~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
.+|+++||||||++||+.+...+.+.++ +.|+|+|++||+++.+ ..||++++|++
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~ 212 (241)
T PRK10895 154 ANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQ 212 (241)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeC
Confidence 9999999999999999999998877664 3589999999999766 57999999975
No 314
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-36 Score=329.43 Aligned_cols=197 Identities=22% Similarity=0.317 Sum_probs=166.0
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc------c-ccccEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D-LNKEIF 253 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~-~~~~i~ 253 (1075)
.++++|+++.|+ ++++|+++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .+..++
T Consensus 5 ~l~~~~l~~~~~-~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 83 (255)
T PRK11300 5 LLSVSGLMMRFG-GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGVV 83 (255)
T ss_pred eEEEeeEEEEEC-CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCeE
Confidence 689999999996 46899999999999999999999999999999999999999999999998641 1 234599
Q ss_pred EEcCCCCCCcC-CHHHHhcCCCCCC-------cc--------cCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCC
Q 001446 254 YVPQRPYTAVG-TLRDQLIYPLTSD-------QE--------VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELS 317 (1075)
Q Consensus 254 ~v~Q~~~~~~~-tv~~ni~~~~~~~-------~~--------~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LS 317 (1075)
|+||+|.++.. |++||+.++.... .. .......++.++++.+++.+..++.+ .+||
T Consensus 84 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS 155 (255)
T PRK11300 84 RTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANRQA--------GNLA 155 (255)
T ss_pred EeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhCCh--------hhCC
Confidence 99999988875 9999998753210 00 00011235667888999988777765 6899
Q ss_pred hhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---c-CCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 318 LGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 318 gGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~---~-~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
||||||++|||||+.+|+++||||||++||+.+...+.+.+.+ . |+|+|++||+++.+ ..||+++++++
T Consensus 156 ~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 229 (255)
T PRK11300 156 YGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQ 229 (255)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999887753 3 78999999999987 46999999986
No 315
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2.3e-36 Score=340.74 Aligned_cols=186 Identities=27% Similarity=0.330 Sum_probs=158.9
Q ss_pred CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCc----C------cc---c-cccEEEEcCCC
Q 001446 194 GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGV----G------SD---L-NKEIFYVPQRP 259 (1075)
Q Consensus 194 ~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~----~------~~---~-~~~i~~v~Q~~ 259 (1075)
...+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. + .. . +++++||||++
T Consensus 36 ~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~ 115 (382)
T TIGR03415 36 LVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKF 115 (382)
T ss_pred CEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCC
Confidence 456899999999999999999999999999999999999999999999984 2 01 1 25799999999
Q ss_pred CCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCEEE
Q 001446 260 YTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAI 338 (1075)
Q Consensus 260 ~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~ill 338 (1075)
.+++ .|++||+.++............+++.++++.++|.++.++.| .+||||||||++|||||+.+|+++|
T Consensus 116 ~l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~--------~~LSgGq~QRV~LARALa~~P~ILL 187 (382)
T TIGR03415 116 ALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKP--------GELSGGMQQRVGLARAFAMDADILL 187 (382)
T ss_pred cCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9887 699999998743211111122356778999999998888877 6899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcCC
Q 001446 339 LDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDGE 387 (1075)
Q Consensus 339 LDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~~ 387 (1075)
|||||++||+.++..+++.+.+ .++|+|+||||++.+ +.+|+|++|+++
T Consensus 188 lDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G 241 (382)
T TIGR03415 188 MDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGG 241 (382)
T ss_pred EECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 9999999999999999887753 389999999999986 679999999863
No 316
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=9.4e-37 Score=339.84 Aligned_cols=185 Identities=25% Similarity=0.278 Sum_probs=157.8
Q ss_pred CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----ccccccEEEEcCCCCCCcC-CHH
Q 001446 194 GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYVPQRPYTAVG-TLR 267 (1075)
Q Consensus 194 ~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v~Q~~~~~~~-tv~ 267 (1075)
++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...+++++|+||++.++.. |++
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHH
Confidence 4679999999999999999999999999999999999999999999999964 1235679999999988764 999
Q ss_pred HHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCC
Q 001446 268 DQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVT 347 (1075)
Q Consensus 268 ~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD 347 (1075)
||+.+.............+++.++++.+++.+..++.+ .+||||||||++|||||+++|+++||||||+|||
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD 156 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEELLELFELGEAADRPV--------GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLD 156 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhCCch--------hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCC
Confidence 99986432111111112345778999999988777765 6899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 348 TDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 348 ~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
+.+++.+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 157 ~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~ 199 (302)
T TIGR01188 157 PRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDH 199 (302)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEEC
Confidence 9999999887754 4899999999999875 6999999986
No 317
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.2e-36 Score=322.62 Aligned_cols=201 Identities=25% Similarity=0.340 Sum_probs=160.1
Q ss_pred EEeeeeeeCCCc-cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEEEE
Q 001446 838 SFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFYV 914 (1075)
Q Consensus 838 ~f~~V~~~yp~~-~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~~V 914 (1075)
+++||++.|++. .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++...+ ..+.+++|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 368899988752 57999999999999999999999999999999999999999999999999887542 345679999
Q ss_pred cCCC--CCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccC
Q 001446 915 PQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 992 (1075)
Q Consensus 915 pQdP--~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~ 992 (1075)
||+| .++..|+++|+.++.... +.. ....+..+.++++.+++.....+. ...
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~----------~~~------~~~~~~~~~~~l~~~~l~~~~~~~----------~~~ 134 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENL----------GLP------EEEIEERVEEALELVGLEGLRDRS----------PFT 134 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHc----------CCC------HHHHHHHHHHHHHHcCcHhhhcCC----------ccc
Confidence 9998 467889999997531100 000 000123345666777765433222 356
Q ss_pred CChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCchh-hccceEEEEcC
Q 001446 993 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIP-FHSLELRLIDG 1064 (1075)
Q Consensus 993 LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i~-~~~~~l~l~~g 1064 (1075)
||||||||++|||||+++|++|||||||++||.++...+.+.+++ .++|+|+|+|++..+. +.|+++.|.+|
T Consensus 135 LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G 210 (211)
T cd03225 135 LSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDG 210 (211)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999888776643 4799999999998664 68999999765
No 318
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=3.4e-36 Score=328.33 Aligned_cols=197 Identities=30% Similarity=0.395 Sum_probs=166.6
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc------cccccEEEE
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DLNKEIFYV 255 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~------~~~~~i~~v 255 (1075)
++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.++|+
T Consensus 2 l~~~~l~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (256)
T TIGR03873 2 LRLSRVSWSAG-GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVALV 80 (256)
T ss_pred ceEEeEEEEEC-CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEEe
Confidence 68999999986 46899999999999999999999999999999999999999999999998641 234579999
Q ss_pred cCCCCC-CcCCHHHHhcCCCCCC-cc---cCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHH
Q 001446 256 PQRPYT-AVGTLRDQLIYPLTSD-QE---VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 330 (1075)
Q Consensus 256 ~Q~~~~-~~~tv~~ni~~~~~~~-~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral 330 (1075)
||++.+ +..|++||+.++.... .. ......+++.++++.+++.+..++.+ ..||||||||++||||+
T Consensus 81 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~la~al 152 (256)
T TIGR03873 81 EQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM--------STLSGGERQRVHVARAL 152 (256)
T ss_pred cccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc--------ccCCHHHHHHHHHHHHH
Confidence 999864 4579999998753211 00 01112346778999999988777765 68999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhH-hhCCeEEEEcCC
Q 001446 331 YHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDGE 387 (1075)
Q Consensus 331 ~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~-~~~d~i~~l~~~ 387 (1075)
+.+|+++||||||++||+.+...+.+.+++ .+.|+|++||+++.+ ..||++++|+++
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G 213 (256)
T TIGR03873 153 AQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGG 213 (256)
T ss_pred hcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 999999999999999999999999887764 378999999999998 579999999863
No 319
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-36 Score=326.73 Aligned_cols=207 Identities=21% Similarity=0.311 Sum_probs=170.1
Q ss_pred eEEeeeeeeCCCc-cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEEE
Q 001446 837 ISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFY 913 (1075)
Q Consensus 837 I~f~~V~~~yp~~-~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~~ 913 (1075)
|+++|+++.|++. .++|+|+||++++||.++|+||+|||||||+++|.|+++|++|+|.++|.++...+ ..|.+++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 5789999999754 47999999999999999999999999999999999999999999999998886542 23567999
Q ss_pred EcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccC
Q 001446 914 VPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDI 992 (1075)
Q Consensus 914 VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~ 992 (1075)
+||+|.+|..|+++|+.++..... ...+.+.++..++...++..+.|+++.. .....
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 138 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPGAT----------------------REEVEEAARAANAHEFIMELPEGYDTVIGERGVK 138 (234)
T ss_pred eCCCCeeccccHHHHhhccCCCCC----------------------HHHHHHHHHHcCcHHHHHhcccCcceeeccCCCc
Confidence 999999999999999986432100 1112223344445555555555666644 24568
Q ss_pred CChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 993 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 993 LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
||+|||||++|||||+++|+++||||||++||.++...+.+.+++ .+.|+|+|+|+++.+...|+++.|.+|.
T Consensus 139 LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~ 213 (234)
T cd03251 139 LSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGK 213 (234)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCe
Confidence 999999999999999999999999999999999999988877754 4889999999999888899999997765
No 320
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-36 Score=321.31 Aligned_cols=201 Identities=22% Similarity=0.271 Sum_probs=162.7
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc-CCcCcEEEEc
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-GSGCGIFYVP 915 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~-~~r~~i~~Vp 915 (1075)
|+++||++.|++ .++|+|+||+|++| .++|+||||||||||+++|.|+++|.+|+|.++|.++...+ ..+.+++|+|
T Consensus 1 i~~~~~~~~~~~-~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 78 (211)
T cd03264 1 LQLENLTKRYGK-KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGYLP 78 (211)
T ss_pred CEEEEEEEEECC-EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEEec
Confidence 579999999865 47999999999999 99999999999999999999999999999999999887542 3456799999
Q ss_pred CCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCC
Q 001446 916 QRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 994 (1075)
Q Consensus 916 QdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 994 (1075)
|+|.+|.+ |+++|+.++.... +.. ....++.+.++++.+++.+..+.. ...||
T Consensus 79 q~~~~~~~~tv~~~l~~~~~~~----------~~~------~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS 132 (211)
T cd03264 79 QEFGVYPNFTVREFLDYIAWLK----------GIP------SKEVKARVDEVLELVNLGDRAKKK----------IGSLS 132 (211)
T ss_pred CCCcccccCCHHHHHHHHHHHh----------CCC------HHHHHHHHHHHHHHCCCHHHHhCc----------hhhCC
Confidence 99999986 9999997531100 000 000123455677777775433221 24699
Q ss_pred hhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 995 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 995 gGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
||||||++||||++++|++|||||||++||..+...+.+.+++ .+.|+|+|+|+++.+ ++.|+++.+.+|.
T Consensus 133 ~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~ 206 (211)
T cd03264 133 GGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGK 206 (211)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999888877754 368999999999876 5899999997653
No 321
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2.8e-36 Score=324.84 Aligned_cols=197 Identities=27% Similarity=0.401 Sum_probs=167.0
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc----cccccEEEEcC
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVPQ 257 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~----~~~~~i~~v~Q 257 (1075)
++++|+++.|+ ++++|+|+||++.+||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|+||
T Consensus 1 i~i~~l~~~~~-~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~~~~~i~~~~q 79 (237)
T TIGR00968 1 IEIANISKRFG-SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHARDRKIGFVFQ 79 (237)
T ss_pred CEEEEEEEEEC-CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcCEEEEec
Confidence 46899999996 45799999999999999999999999999999999999999999999998641 23467999999
Q ss_pred CCCCCcC-CHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCE
Q 001446 258 RPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 336 (1075)
Q Consensus 258 ~~~~~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~i 336 (1075)
+|.++.. |++||+.+.............+++.++++.+++.+..++.+ .+||||||||++|||||+++|++
T Consensus 80 ~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~lS~G~~qrl~laral~~~p~l 151 (237)
T TIGR00968 80 HYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRYP--------NQLSGGQRQRVALARALAVEPQV 151 (237)
T ss_pred ChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh--------hhCCHHHHHHHHHHHHHhcCCCE
Confidence 9988865 99999987533211111112345678899999988777765 68999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHh---c-CCeEEEEecChhhH-hhCCeEEEEcCC
Q 001446 337 AILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALV-AFHDVVLSLDGE 387 (1075)
Q Consensus 337 llLDEpts~LD~~~~~~i~~~l~~---~-~~t~i~vtH~~~~~-~~~d~i~~l~~~ 387 (1075)
+||||||++||+.+++.+.+.+++ . ++|+|++||+++.+ +.||++++++++
T Consensus 152 lllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g 207 (237)
T TIGR00968 152 LLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNG 207 (237)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECC
Confidence 999999999999999999888764 3 78999999999986 469999999863
No 322
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=2.9e-36 Score=309.88 Aligned_cols=163 Identities=29% Similarity=0.438 Sum_probs=147.9
Q ss_pred EEEEeEEEEcCCC-CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----ccccccEEEE
Q 001446 182 IEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYV 255 (1075)
Q Consensus 182 i~~~~v~~~~~~~-~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v 255 (1075)
++++|+++.|++. +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|+
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~ 80 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLISVL 80 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEEEE
Confidence 4689999999754 379999999999999999999999999999999999999999999999864 1235679999
Q ss_pred cCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCC
Q 001446 256 PQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 335 (1075)
Q Consensus 256 ~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~ 335 (1075)
||+|+++..|++||+ + ..||||||||++||||++++|+
T Consensus 81 ~q~~~~~~~tv~~~i----------------------------------~--------~~LS~G~~qrv~laral~~~p~ 118 (178)
T cd03247 81 NQRPYLFDTTLRNNL----------------------------------G--------RRFSGGERQRLALARILLQDAP 118 (178)
T ss_pred ccCCeeecccHHHhh----------------------------------c--------ccCCHHHHHHHHHHHHHhcCCC
Confidence 999988888999887 2 5799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 336 FAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 336 illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
++||||||++||+.+++.+++.+++ .+.|+|++||+.+.+..+|++++|++
T Consensus 119 ~lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~ 171 (178)
T cd03247 119 IVLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLEN 171 (178)
T ss_pred EEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEEC
Confidence 9999999999999999999888865 37899999999999988999999985
No 323
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.5e-37 Score=300.96 Aligned_cols=197 Identities=22% Similarity=0.278 Sum_probs=168.5
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc-------cccccEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIF 253 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~-------~~~~~i~ 253 (1075)
.+..+|+.++|. ++++++++||++++||++++.||||+||||.+.++.|+.+|++|+|.+++.+- .-|..||
T Consensus 4 ~L~a~~l~K~y~-kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlGig 82 (243)
T COG1137 4 TLVAENLAKSYK-KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLGIG 82 (243)
T ss_pred EEEehhhhHhhC-CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcCcc
Confidence 578899999984 67899999999999999999999999999999999999999999999999761 2245699
Q ss_pred EEcCCCCCCcC-CHHHHhcCCCCCCcccC--cCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHH
Q 001446 254 YVPQRPYTAVG-TLRDQLIYPLTSDQEVE--PLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 330 (1075)
Q Consensus 254 ~v~Q~~~~~~~-tv~~ni~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral 330 (1075)
|+||+|.+|.. ||+|||..-....+... .....++.+.|+.+.+.+..++. +.+||||||+|+.|||||
T Consensus 83 YLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr~~~--------a~sLSGGERRR~EIARaL 154 (243)
T COG1137 83 YLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHLRDSK--------AYSLSGGERRRVEIARAL 154 (243)
T ss_pred cccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHHhcCc--------ccccccchHHHHHHHHHH
Confidence 99999999986 99999986554332111 23344577899999999988875 379999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHH---HHHhcCCeEEEEecChh-hHhhCCeEEEEcC
Q 001446 331 YHKPKFAILDECTSAVTTDMEERFCA---KVRAMGTSCITISHRPA-LVAFHDVVLSLDG 386 (1075)
Q Consensus 331 ~~~p~illLDEpts~LD~~~~~~i~~---~l~~~~~t~i~vtH~~~-~~~~~d~i~~l~~ 386 (1075)
+.+|++++||||++|+||.....|.+ .|+..|..|++.-|+.. .+..|||.|++..
T Consensus 155 a~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~ 214 (243)
T COG1137 155 AANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISD 214 (243)
T ss_pred hcCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEec
Confidence 99999999999999999988776655 56677999999999974 5789999999975
No 324
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.2e-36 Score=326.13 Aligned_cols=205 Identities=23% Similarity=0.278 Sum_probs=164.0
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCC-----CCCCCeEecCCCCCcccc----CC
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLW-----PVVSGSLTKPSQHIDEEA----GS 907 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~-----~~~sG~I~idg~di~~~~----~~ 907 (1075)
|+++||++.|++ .++|+|+||+|++||+++|+|+||||||||+++|.|++ +|.+|+|.++|.++...+ ..
T Consensus 1 i~~~~l~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (227)
T cd03260 1 IELRDLNVYYGD-KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLEL 79 (227)
T ss_pred CEEEEEEEEcCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHHH
Confidence 578999999975 47999999999999999999999999999999999999 999999999999886542 23
Q ss_pred cCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc
Q 001446 908 GCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 987 (1075)
Q Consensus 908 r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 987 (1075)
|.+++|+||+|.+|..|+++|+.++.... +.. .....+..+.++++.+++.+.....+ +
T Consensus 80 ~~~i~~~~q~~~~~~~tv~e~l~~~~~~~----------~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~~---~--- 138 (227)
T cd03260 80 RRRVGMVFQKPNPFPGSIYDNVAYGLRLH----------GIK-----LKEELDERVEEALRKAALWDEVKDRL---H--- 138 (227)
T ss_pred HhhEEEEecCchhccccHHHHHHhHHHhc----------CCC-----cHHHHHHHHHHHHHHcCCChHHhccC---C---
Confidence 56799999999999889999997542100 000 00001234566777777754332210 0
Q ss_pred ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCch-hhccceEEEEcC
Q 001446 988 NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLIDG 1064 (1075)
Q Consensus 988 ~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i-~~~~~~l~l~~g 1064 (1075)
...||||||||++|||||+++|++|||||||++||.++...+.+.+++ ..+|+|+|+|+++.+ ++.|+++.|.+|
T Consensus 139 --~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G 216 (227)
T cd03260 139 --ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNG 216 (227)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCC
Confidence 256999999999999999999999999999999999999888777654 238999999999864 689999999776
Q ss_pred C
Q 001446 1065 E 1065 (1075)
Q Consensus 1065 ~ 1065 (1075)
.
T Consensus 217 ~ 217 (227)
T cd03260 217 R 217 (227)
T ss_pred E
Confidence 5
No 325
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-36 Score=328.02 Aligned_cols=197 Identities=24% Similarity=0.295 Sum_probs=163.6
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCC-----CccEEEeCCcC------cccc
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVG------SDLN 249 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~-----~~G~i~~~~~~------~~~~ 249 (1075)
.++++|+++.|++ +++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+ ..++
T Consensus 3 ~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 81 (250)
T PRK14247 3 KIEIRDLKVSFGQ-VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELR 81 (250)
T ss_pred eEEEEeeEEEECC-eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHh
Confidence 5899999999864 6799999999999999999999999999999999999974 79999999864 1345
Q ss_pred ccEEEEcCCCCCC-cCCHHHHhcCCCCCCcc--cCcCCHHHHHHHHHHcCChh----HHhcCCCCcccCCCCCCChhHHH
Q 001446 250 KEIFYVPQRPYTA-VGTLRDQLIYPLTSDQE--VEPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQQ 322 (1075)
Q Consensus 250 ~~i~~v~Q~~~~~-~~tv~~ni~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGqkq 322 (1075)
+.|+|+||+|.++ ..|++||+.++...... ......+++.++++.+++.+ ..++.+ .+|||||||
T Consensus 82 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LSgG~~q 153 (250)
T PRK14247 82 RRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKDRLDAPA--------GKLSGGQQQ 153 (250)
T ss_pred ccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhhhhcCCc--------ccCCHHHHH
Confidence 6899999999754 57999999875322111 01112345678899999854 233333 689999999
Q ss_pred HHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 323 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 323 Rl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
|++|||||+.+|+++||||||++||+.++..+.+.+++ .++|+|++||+++.+ ..||++++|++
T Consensus 154 rv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 220 (250)
T PRK14247 154 RLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYK 220 (250)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 99999999999999999999999999999999988865 378999999999987 47999999975
No 326
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.6e-36 Score=300.96 Aligned_cols=196 Identities=22% Similarity=0.320 Sum_probs=162.1
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-------ccccccEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-------SDLNKEIF 253 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-------~~~~~~i~ 253 (1075)
.++++|++..|. ..++|+++||++++||+++|+|+||+|||||||+|+|+.++.+|+|.++|.+ ...+..|+
T Consensus 3 mL~v~~l~~~YG-~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi~ 81 (237)
T COG0410 3 MLEVENLSAGYG-KIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGIA 81 (237)
T ss_pred ceeEEeEeeccc-ceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCeE
Confidence 689999999985 5789999999999999999999999999999999999999999999999976 12356799
Q ss_pred EEcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcC-ChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHc
Q 001446 254 YVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVD-LEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 254 ~v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~-l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~ 331 (1075)
||||...+|. .||+||+..+...... ........+++.+.+- |.+..++. +.+|||||||.+||||||+
T Consensus 82 ~VPegR~iF~~LTVeENL~~g~~~~~~-~~~~~~~~e~v~~lFP~Lker~~~~--------aG~LSGGEQQMLAiaRALm 152 (237)
T COG0410 82 YVPEGRRIFPRLTVEENLLLGAYARRD-KEAQERDLEEVYELFPRLKERRNQR--------AGTLSGGEQQMLAIARALM 152 (237)
T ss_pred eCcccccchhhCcHHHHHhhhhhcccc-cccccccHHHHHHHChhHHHHhcCc--------ccCCChHHHHHHHHHHHHh
Confidence 9999998876 5999999987543321 1111112445555553 34444443 4799999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHh---c-CCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l~~---~-~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
.+|++|+|||||.||-|...++|++.+++ . |.||++|-++.... +.+|+.|+|++
T Consensus 153 ~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~ 212 (237)
T COG0410 153 SRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLEN 212 (237)
T ss_pred cCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeC
Confidence 99999999999999999999998887653 3 77999999999876 58999999986
No 327
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-36 Score=335.19 Aligned_cols=204 Identities=19% Similarity=0.239 Sum_probs=164.5
Q ss_pred eEEeeeeeeCCCc----cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc------cC
Q 001446 837 ISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE------AG 906 (1075)
Q Consensus 837 I~f~~V~~~yp~~----~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~------~~ 906 (1075)
|+++||++.|++. +++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ..
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 7899999999742 4699999999999999999999999999999999999999999999999998642 23
Q ss_pred CcCcEEEEcCCC--CCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCch-hhhhhhccCC
Q 001446 907 SGCGIFYVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS-YLLEREEVGW 983 (1075)
Q Consensus 907 ~r~~i~~VpQdP--~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~-~~i~~~~~Gl 983 (1075)
.|.+|+||||+| .+|..|+++||.++.... +.. ....++.+.++++.++|. +....
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~----------~~~------~~~~~~~~~~~l~~~gL~~~~~~~----- 141 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNF----------KMN------LDEVKNYAHRLLMDLGFSRDVMSQ----- 141 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHc----------CCC------HHHHHHHHHHHHHHcCCChhhhhC-----
Confidence 466899999998 688899999998642100 000 000123345667777663 22211
Q ss_pred ccccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCch-hhccce
Q 001446 984 DANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLE 1058 (1075)
Q Consensus 984 dt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i-~~~~~~ 1058 (1075)
....||||||||++|||||+.+|+||||||||++||+.+...+.+++++ .|+|||+|+|+++.+ ++.|++
T Consensus 142 -----~~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri 216 (286)
T PRK13646 142 -----SPFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEV 216 (286)
T ss_pred -----CcccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEE
Confidence 2457999999999999999999999999999999999999888776643 489999999999865 689999
Q ss_pred EEEEcCCc
Q 001446 1059 LRLIDGEG 1066 (1075)
Q Consensus 1059 l~l~~g~g 1066 (1075)
+.|.+|.-
T Consensus 217 ~~l~~G~i 224 (286)
T PRK13646 217 IVMKEGSI 224 (286)
T ss_pred EEEECCEE
Confidence 99987763
No 328
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.1e-36 Score=328.82 Aligned_cols=212 Identities=23% Similarity=0.292 Sum_probs=163.2
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc---CCcCcEEE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIFY 913 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~---~~r~~i~~ 913 (1075)
|+++||++.|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|.+|+|.++|.++...+ ..+.+++|
T Consensus 1 l~~~~l~~~~~~-~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (236)
T cd03219 1 LEVRGLTKRFGG-LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIGR 79 (236)
T ss_pred CeeeeeEEEECC-EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEEE
Confidence 478999999975 56999999999999999999999999999999999999999999999999887653 23456999
Q ss_pred EcCCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccC
Q 001446 914 VPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 992 (1075)
Q Consensus 914 VpQdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~ 992 (1075)
|||+|.+|.+ |+++|+.++....... ...+. . .........+.+.++++.+++...... ....
T Consensus 80 v~q~~~l~~~~tv~~~l~~~~~~~~~~-~~~~~--~---~~~~~~~~~~~~~~~l~~~~l~~~~~~----------~~~~ 143 (236)
T cd03219 80 TFQIPRLFPELTVLENVMVAAQARTGS-GLLLA--R---ARREEREARERAEELLERVGLADLADR----------PAGE 143 (236)
T ss_pred EecccccccCCCHHHHHHHHHhhcccc-ccccc--c---ccccHHHHHHHHHHHHHHcCccchhhC----------Chhh
Confidence 9999999987 9999997542100000 00000 0 000000112345566777766433221 1356
Q ss_pred CChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 993 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 993 LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
||||||||++||||++++|++|||||||++||.++...+.+.+++ .++|+|+|+|+++.+ .+.|+++.+.+|.
T Consensus 144 LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~ 220 (236)
T cd03219 144 LSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGR 220 (236)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999888776643 589999999999876 6799999997654
No 329
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.3e-35 Score=313.56 Aligned_cols=188 Identities=23% Similarity=0.256 Sum_probs=140.1
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEc
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 915 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~Vp 915 (1075)
.+-+.||+|.||+.+|.+++++|-|.--.+|+||||+|.||||++.+|.|-.+|..|...-+ .|.+|++.-
T Consensus 586 vLGlH~VtFgy~gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~GE~RKn---------hrL~iG~Fd 656 (807)
T KOG0066|consen 586 VLGLHDVTFGYPGQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDGELRKN---------HRLRIGWFD 656 (807)
T ss_pred eeecccccccCCCCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcchhhcc---------ceeeeechh
Confidence 46689999999999999999999999999999999999999999999999999999987533 356799888
Q ss_pred CCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCCh
Q 001446 916 QRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 995 (1075)
Q Consensus 916 QdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 995 (1075)
|.. -+.|. +..+. .+.+. ..-+..-.+....|...||.... .|. .-..|||
T Consensus 657 Qh~-------~E~L~-~Eetp---~EyLq---------r~FNlpyq~ARK~LG~fGL~sHA-------HTi--kikdLSG 707 (807)
T KOG0066|consen 657 QHA-------NEALN-GEETP---VEYLQ---------RKFNLPYQEARKQLGTFGLASHA-------HTI--KIKDLSG 707 (807)
T ss_pred hhh-------HHhhc-cccCH---HHHHH---------HhcCCChHHHHHHhhhhhhhhcc-------ceE--eeeecCC
Confidence 864 22232 11110 01110 00111223334444444442211 111 1235899
Q ss_pred hHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHhcCceEEEecCCCCchhhccceEEE
Q 001446 996 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRL 1061 (1075)
Q Consensus 996 GQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~~~~TvI~IaHRls~i~~~~~~l~l 1061 (1075)
|||-|+++|-.-|+.|+||||||||.+||.++..++-+.+.+.+..||+|+|...+|.--+-.|.+
T Consensus 708 GQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney~GgVi~VsHDeRLi~eT~C~LwV 773 (807)
T KOG0066|consen 708 GQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEYNGGVIMVSHDERLIVETDCNLWV 773 (807)
T ss_pred cchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhccCcEEEEecccceeeecCceEEE
Confidence 999999999999999999999999999999999999999988888999999999887655555544
No 330
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2e-36 Score=327.07 Aligned_cols=207 Identities=25% Similarity=0.353 Sum_probs=170.2
Q ss_pred eEEeeeeeeCCC--ccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEE
Q 001446 837 ISFSKLDIITPS--QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIF 912 (1075)
Q Consensus 837 I~f~~V~~~yp~--~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~ 912 (1075)
|+++|+++.|++ ..++|+|+||+|++||.++|+|+||||||||+++|.|+++|.+|+|.++|.++...+ ..+.+++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 578999999975 357999999999999999999999999999999999999999999999999886542 2345799
Q ss_pred EEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-cccc
Q 001446 913 YVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWED 991 (1075)
Q Consensus 913 ~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~ 991 (1075)
|+||+|.+|+.|+++|+.++.... ....+.+.++..++..+.+.+|.|+++.. ....
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 138 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDA----------------------TDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGS 138 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCC----------------------CHHHHHHHHHHcChHHHHHhhccccceeeccCCc
Confidence 999999999999999998643210 01112233344455555555666777654 3457
Q ss_pred CCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 992 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 992 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
+||||||||++||||++++|++|||||||++||..+...+.+.+++ .++|+|+++|+++.+.+.|+++.|.+|.
T Consensus 139 ~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~ 214 (238)
T cd03249 139 QLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQ 214 (238)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCE
Confidence 8999999999999999999999999999999999999888877654 5899999999999888999999997764
No 331
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.6e-36 Score=341.94 Aligned_cols=203 Identities=20% Similarity=0.250 Sum_probs=169.4
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEc
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 915 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~Vp 915 (1075)
.|+++||++.|++ ..+|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++......+++++||+
T Consensus 4 ~l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~v~ 82 (353)
T TIGR03265 4 YLSIDNIRKRFGA-FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGIVF 82 (353)
T ss_pred EEEEEEEEEEeCC-eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 4899999999975 569999999999999999999999999999999999999999999999999987654456799999
Q ss_pred CCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCC
Q 001446 916 QRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 994 (1075)
Q Consensus 916 QdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 994 (1075)
|++.||+ .|+++|+.|+..... . .....+..+.++++.++|.++.++. ...||
T Consensus 83 Q~~~lfp~~tv~eNi~~~~~~~~----------~------~~~~~~~~~~~~l~~l~L~~~~~~~----------~~~LS 136 (353)
T TIGR03265 83 QSYALFPNLTVADNIAYGLKNRG----------M------GRAEVAERVAELLDLVGLPGSERKY----------PGQLS 136 (353)
T ss_pred CCcccCCCCcHHHHHHHHHHhcC----------C------CHHHHHHHHHHHHHHcCCCchhhCC----------hhhCC
Confidence 9999996 699999997632100 0 0000134466778888886655443 35699
Q ss_pred hhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCC-chhhccceEEEEcCC
Q 001446 995 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPA-LIPFHSLELRLIDGE 1065 (1075)
Q Consensus 995 gGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls-~i~~~~~~l~l~~g~ 1065 (1075)
||||||+||||||+++|++|+||||||+||..+...+.+.+++ .++|+|.|+|+++ .....|+++.|.+|.
T Consensus 137 gGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~ 212 (353)
T TIGR03265 137 GGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGV 212 (353)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999998887766543 4899999999998 468899999998775
No 332
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-36 Score=324.68 Aligned_cols=195 Identities=18% Similarity=0.223 Sum_probs=162.9
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc-------cccccEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIF 253 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~-------~~~~~i~ 253 (1075)
.++++|+++.|+ ++++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++
T Consensus 5 ~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 83 (237)
T PRK11614 5 MLSFDKVSAHYG-KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAVA 83 (237)
T ss_pred EEEEEeEEEeeC-CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCEE
Confidence 689999999986 46799999999999999999999999999999999999999999999999641 1346799
Q ss_pred EEcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHc-CChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHc
Q 001446 254 YVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNV-DLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 254 ~v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~-~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~ 331 (1075)
|+||++.++. .|+++|+.++..... .....+++.++++.+ ++.+..++.+ .+||||||||++||||++
T Consensus 84 ~~~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~--------~~LS~G~~qrl~la~al~ 153 (237)
T PRK11614 84 IVPEGRRVFSRMTVEENLAMGGFFAE--RDQFQERIKWVYELFPRLHERRIQRA--------GTMSGGEQQMLAIGRALM 153 (237)
T ss_pred EeccCcccCCCCcHHHHHHHhhhccC--hhHHHHHHHHHHHHHHHHHHHHhCch--------hhCCHHHHHHHHHHHHHH
Confidence 9999998877 499999987532111 111223455666766 4665555544 689999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ ..||++++|++
T Consensus 154 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 212 (237)
T PRK11614 154 SQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLEN 212 (237)
T ss_pred hCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeC
Confidence 99999999999999999999998887753 489999999999865 67999999986
No 333
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=2.7e-36 Score=320.49 Aligned_cols=203 Identities=22% Similarity=0.255 Sum_probs=162.9
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcc--c--cCCcCcEE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDE--E--AGSGCGIF 912 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~--~--~~~r~~i~ 912 (1075)
|+++||++.|++ .++|+|+||+|+|||++||+||||||||||+++|.|+++|++|+|.++|.++.. . ...+.+++
T Consensus 1 l~~~~l~~~~~~-~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 79 (213)
T cd03262 1 IEIKNLHKSFGD-FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKVG 79 (213)
T ss_pred CEEEEEEEEECC-eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcce
Confidence 578999999975 579999999999999999999999999999999999999999999999998853 1 23456799
Q ss_pred EEcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccccccc
Q 001446 913 YVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 991 (1075)
Q Consensus 913 ~VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~ 991 (1075)
|+||+|.+|. .|+++|+.++..... +. .....++.+.++++.+++.....+. ..
T Consensus 80 ~~~q~~~~~~~~t~~e~l~~~~~~~~---------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~ 134 (213)
T cd03262 80 MVFQQFNLFPHLTVLENITLAPIKVK---------GM------SKAEAEERALELLEKVGLADKADAY----------PA 134 (213)
T ss_pred EEecccccCCCCcHHHHHHhHHHHhc---------CC------CHHHHHHHHHHHHHHcCCHhHhhhC----------cc
Confidence 9999999986 699999976421000 00 0000123345666777765443322 24
Q ss_pred CCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 992 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 992 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
.||||||||++||||++++|++|||||||++||.++...+.+.+++ .++|+|+++|+++.+ ++.|+++.|.+|.
T Consensus 135 ~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~ 212 (213)
T cd03262 135 QLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGR 212 (213)
T ss_pred ccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCc
Confidence 6999999999999999999999999999999999999888776643 489999999999876 6899999997653
No 334
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-36 Score=327.06 Aligned_cols=199 Identities=24% Similarity=0.252 Sum_probs=163.4
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEE
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFY 913 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~ 913 (1075)
.|+++||+++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++... ...|.+++|
T Consensus 3 ~l~~~~l~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~ 81 (241)
T PRK14250 3 EIEFKEVSYSSFG-KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIGM 81 (241)
T ss_pred eEEEEeEEEEeCC-eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEEE
Confidence 4889999999964 5799999999999999999999999999999999999999999999999988754 234567999
Q ss_pred EcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCch-hhhhhhccCCccccccccC
Q 001446 914 VPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS-YLLEREEVGWDANLNWEDI 992 (1075)
Q Consensus 914 VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~-~~i~~~~~Gldt~~~~g~~ 992 (1075)
+||+|.+|+.|+++|+.++..... ..+..+.++++.+++. +.... ....
T Consensus 82 ~~q~~~~~~~tv~e~l~~~~~~~~--------------------~~~~~~~~~l~~~~l~~~~~~~----------~~~~ 131 (241)
T PRK14250 82 VFQQPHLFEGTVKDNIEYGPMLKG--------------------EKNVDVEYYLSIVGLNKEYATR----------DVKN 131 (241)
T ss_pred EecCchhchhhHHHHHhcchhhcC--------------------cHHHHHHHHHHHcCCCHHHhhC----------Cccc
Confidence 999999999999999976421000 0123345566666663 22211 1356
Q ss_pred CChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 993 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 993 LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
||||||||++||||++++|++|||||||++||.++...+.+.+++ .|+|+|+|+|+++.+ .+.|+++.|.+|.
T Consensus 132 LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~ 209 (241)
T PRK14250 132 LSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGI 209 (241)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999998887776543 389999999999865 5899999997664
No 335
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=5.1e-36 Score=317.50 Aligned_cols=195 Identities=23% Similarity=0.303 Sum_probs=165.7
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc---cccccEEEEc
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---DLNKEIFYVP 256 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~---~~~~~i~~v~ 256 (1075)
..++++|+++.|+ ++++++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|++
T Consensus 10 ~~l~~~~l~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~~~~~~i~~~~ 88 (214)
T PRK13543 10 PLLAAHALAFSRN-EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRGDRSRFMAYLG 88 (214)
T ss_pred ceEEEeeEEEecC-CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccchhhhhceEEee
Confidence 4699999999986 45799999999999999999999999999999999999999999999998641 2345699999
Q ss_pred CCCCCCcC-CHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCC
Q 001446 257 QRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 335 (1075)
Q Consensus 257 Q~~~~~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~ 335 (1075)
|++.++.. |++||+.+...... ...++...++++.+++.+..++.+ .+||||||||++||||++.+|+
T Consensus 89 q~~~~~~~~t~~e~l~~~~~~~~---~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~~~p~ 157 (214)
T PRK13543 89 HLPGLKADLSTLENLHFLCGLHG---RRAKQMPGSALAIVGLAGYEDTLV--------RQLSAGQKKRLALARLWLSPAP 157 (214)
T ss_pred cCcccccCCcHHHHHHHHHHhcC---CcHHHHHHHHHHHcCChhhccCCh--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 99988775 99999976432111 112345677889999987766655 6899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 336 FAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 336 illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
++||||||++||+.+.+.+.+.+++ .|.|+|++||+.+.+ ..+|++++++.
T Consensus 158 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 158 LWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 9999999999999999999887754 489999999999987 57899998863
No 336
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-36 Score=326.62 Aligned_cols=194 Identities=21% Similarity=0.248 Sum_probs=162.1
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEc
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 915 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~Vp 915 (1075)
.|+++||++.|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++.. .+.+++|+|
T Consensus 12 ~l~i~~l~~~~~~-~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~---~~~~i~~v~ 87 (257)
T PRK11247 12 PLLLNAVSKRYGE-RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAE---AREDTRLMF 87 (257)
T ss_pred cEEEEEEEEEECC-cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHH---hhCceEEEe
Confidence 5999999999964 579999999999999999999999999999999999999999999999976643 356799999
Q ss_pred CCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCC
Q 001446 916 QRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 994 (1075)
Q Consensus 916 QdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 994 (1075)
|+|.+|+ .|+++|+.++.... .+..+.++++.++|.+..... ...||
T Consensus 88 q~~~l~~~~tv~enl~~~~~~~----------------------~~~~~~~~l~~~gl~~~~~~~----------~~~LS 135 (257)
T PRK11247 88 QDARLLPWKKVIDNVGLGLKGQ----------------------WRDAALQALAAVGLADRANEW----------PAALS 135 (257)
T ss_pred cCccCCCCCcHHHHHHhcccch----------------------HHHHHHHHHHHcCChhHhcCC----------hhhCC
Confidence 9999987 69999998653210 123345566777765433222 35699
Q ss_pred hhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 995 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 995 gGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
||||||++|||||+++|++|||||||++||..+...+.+.+++ .++|+|+|+|+++.+ ++.|+++.|.+|.
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~ 211 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGK 211 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999887766543 489999999999864 7899999997664
No 337
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-36 Score=318.95 Aligned_cols=200 Identities=21% Similarity=0.236 Sum_probs=162.6
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEcC
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 916 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~VpQ 916 (1075)
|+++|+++.|++. . .|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++...+..+.+++|+||
T Consensus 1 i~~~~l~~~~~~~-~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 77 (211)
T cd03298 1 VRLDKIRFSYGEQ-P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSMLFQ 77 (211)
T ss_pred CEEEeEEEEeCCE-e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEEec
Confidence 5789999998743 2 399999999999999999999999999999999999999999999998765444567999999
Q ss_pred CCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCCh
Q 001446 917 RPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 995 (1075)
Q Consensus 917 dP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 995 (1075)
+|.+|.+ |+++|+.++...... .....++.+.++++.+++.+..... ...||+
T Consensus 78 ~~~~~~~~tv~enl~~~~~~~~~----------------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS~ 131 (211)
T cd03298 78 ENNLFAHLTVEQNVGLGLSPGLK----------------LTAEDRQAIEVALARVGLAGLEKRL----------PGELSG 131 (211)
T ss_pred ccccCCCCcHHHHHhcccccccC----------------ccHHHHHHHHHHHHHcCCHHHHhCC----------cccCCH
Confidence 9999986 999999865321000 0001134566777877775444332 246999
Q ss_pred hHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 996 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 996 GQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
|||||++||||++++|++|||||||++||.++...+.+.+++ .++|+|+|+|+++.+ ++.|+++.+.+|.
T Consensus 132 G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~ 206 (211)
T cd03298 132 GERQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGR 206 (211)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCE
Confidence 999999999999999999999999999999999887776643 389999999999866 6799999997654
No 338
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.6e-36 Score=340.33 Aligned_cols=206 Identities=21% Similarity=0.294 Sum_probs=168.0
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEcC
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 916 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~VpQ 916 (1075)
|+++|+++.|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++......+.+++||||
T Consensus 3 L~i~~l~~~~~~-~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~v~Q 81 (353)
T PRK10851 3 IEIANIKKSFGR-TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVFQ 81 (353)
T ss_pred EEEEEEEEEeCC-eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEEEec
Confidence 789999999975 5699999999999999999999999999999999999999999999999999876545567999999
Q ss_pred CCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCCh
Q 001446 917 RPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 995 (1075)
Q Consensus 917 dP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 995 (1075)
+|.+|+. |+++|+.|+...... . .+ . .....++.+.++++.++|.++..+. ...|||
T Consensus 82 ~~~l~p~~tv~eni~~~~~~~~~-~-----~~----~--~~~~~~~~~~~~l~~~~L~~~~~~~----------~~~LSg 139 (353)
T PRK10851 82 HYALFRHMTVFDNIAFGLTVLPR-R-----ER----P--NAAAIKAKVTQLLEMVQLAHLADRY----------PAQLSG 139 (353)
T ss_pred CcccCCCCcHHHHHHhhhhhccc-c-----cC----C--CHHHHHHHHHHHHHHcCCchhhhCC----------hhhCCH
Confidence 9999974 999999986421000 0 00 0 0001134556778888875544333 356999
Q ss_pred hHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCC-chhhccceEEEEcCC
Q 001446 996 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPA-LIPFHSLELRLIDGE 1065 (1075)
Q Consensus 996 GQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls-~i~~~~~~l~l~~g~ 1065 (1075)
|||||++|||||+++|++||||||||+||..+...+.+.+++ .++|+|+|+|+++ ...+.|+++.|.+|.
T Consensus 140 Gq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~ 214 (353)
T PRK10851 140 GQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGN 214 (353)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999998877766543 3899999999997 578899999997764
No 339
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=5.2e-36 Score=320.20 Aligned_cols=192 Identities=28% Similarity=0.298 Sum_probs=165.4
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc--cccccEEEEcCCC
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--DLNKEIFYVPQRP 259 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~--~~~~~i~~v~Q~~ 259 (1075)
++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ...+.++|+||++
T Consensus 1 l~l~~v~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~~~~~~~~~q~~ 79 (223)
T TIGR03740 1 LETKNLSKRFG-KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKDLHKIGSLIESP 79 (223)
T ss_pred CEEEeEEEEEC-CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccccccEEEEcCCC
Confidence 46899999986 46799999999999999999999999999999999999999999999998641 1124799999999
Q ss_pred CCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCEEE
Q 001446 260 YTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAI 338 (1075)
Q Consensus 260 ~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~ill 338 (1075)
.++. .|++||+.++.... .....++.++++.+++++..++.+ .+||||||||++||||++.+|+++|
T Consensus 80 ~~~~~~t~~~~~~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~~rv~laral~~~p~lll 147 (223)
T TIGR03740 80 PLYENLTARENLKVHTTLL----GLPDSRIDEVLNIVDLTNTGKKKA--------KQFSLGMKQRLGIAIALLNHPKLLI 147 (223)
T ss_pred CccccCCHHHHHHHHHHHc----CCCHHHHHHHHHHcCCcHHHhhhH--------hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 8765 59999997643211 113456788999999998877765 6899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 339 LDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 339 LDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
|||||++||+.+.+.+.+.+++ .|.|+|++||+++.+ ..||++++|++
T Consensus 148 lDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 199 (223)
T TIGR03740 148 LDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISE 199 (223)
T ss_pred ECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeC
Confidence 9999999999999999888754 478999999999987 47999999976
No 340
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-36 Score=335.48 Aligned_cols=198 Identities=22% Similarity=0.282 Sum_probs=161.7
Q ss_pred cEEEEeEEEEcCCC---CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCC----CCccEEEeCCcCc------c
Q 001446 181 YIEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP----LVSGHIAKPGVGS------D 247 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~---~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~----~~~G~i~~~~~~~------~ 247 (1075)
.++++|+++.|+.. .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.+. .
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 48999999999643 469999999999999999999999999999999999997 4899999999641 1
Q ss_pred ----ccccEEEEcCCCC--CC-cCCHHHHhcCCCCCC-cccCcCCHHHHHHHHHHcCChh---HHhcCCCCcccCCCCCC
Q 001446 248 ----LNKEIFYVPQRPY--TA-VGTLRDQLIYPLTSD-QEVEPLTHGGMVELLKNVDLEY---LLDRYPPEKEINWGDEL 316 (1075)
Q Consensus 248 ----~~~~i~~v~Q~~~--~~-~~tv~~ni~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~---~~~~~~~~~~~~~g~~L 316 (1075)
.++.|+||||+|. +. ..|+.+++..+.... ........+++.++++.++|.+ ..+++| .+|
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~p--------~~L 154 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYP--------HQL 154 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhCCc--------hhC
Confidence 1246999999984 32 347877765432111 0111123456788999999964 456666 689
Q ss_pred ChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 317 SLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 317 SgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
||||||||+|||||+.+|++||+||||++||+.++..+++.+++ .|.|+|+||||++.+ ..+|+|++|.+
T Consensus 155 SgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~ 229 (326)
T PRK11022 155 SGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYA 229 (326)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999887753 489999999999988 57999999986
No 341
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-36 Score=333.23 Aligned_cols=204 Identities=18% Similarity=0.279 Sum_probs=165.1
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcc--c--cCCcCcE
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDE--E--AGSGCGI 911 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~--~--~~~r~~i 911 (1075)
-|+++||++.|++++++|+|+||+|++||.+||+|+||||||||+++|.|+++|.+|+|.++|.++.. . ...|.++
T Consensus 5 ~l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~i 84 (283)
T PRK13636 5 ILKVEELNYNYSDGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRESV 84 (283)
T ss_pred eEEEEeEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhhE
Confidence 48999999999755679999999999999999999999999999999999999999999999998842 1 2345679
Q ss_pred EEEcCCC--CCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccccc
Q 001446 912 FYVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNW 989 (1075)
Q Consensus 912 ~~VpQdP--~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~ 989 (1075)
+|+||+| .+|+.|+++|+.++.... +. .....+..+.++++.++|.....+.
T Consensus 85 g~v~q~~~~~~~~~tv~e~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~gL~~~~~~~---------- 138 (283)
T PRK13636 85 GMVFQDPDNQLFSASVYQDVSFGAVNL----------KL------PEDEVRKRVDNALKRTGIEHLKDKP---------- 138 (283)
T ss_pred EEEecCcchhhccccHHHHHHhHHHHc----------CC------CHHHHHHHHHHHHHHCCChhhhhCC----------
Confidence 9999999 678899999997631100 00 0000123345667777775443222
Q ss_pred ccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCch-hhccceEEEEcC
Q 001446 990 EDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDG 1064 (1075)
Q Consensus 990 g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i-~~~~~~l~l~~g 1064 (1075)
...||||||||++|||||+++|+||||||||++||.++...+.+++++ .|+|+|+|+|+++.+ .+.|+++.|.+|
T Consensus 139 ~~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G 218 (283)
T PRK13636 139 THCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEG 218 (283)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 457999999999999999999999999999999999999877766542 389999999999876 489999999877
Q ss_pred C
Q 001446 1065 E 1065 (1075)
Q Consensus 1065 ~ 1065 (1075)
.
T Consensus 219 ~ 219 (283)
T PRK13636 219 R 219 (283)
T ss_pred E
Confidence 5
No 342
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-36 Score=294.31 Aligned_cols=197 Identities=26% Similarity=0.349 Sum_probs=166.9
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 254 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 254 (1075)
+|+.+|+++.- .++.+|+++||++++||.++|+||||+|||||||.|+|++.|++|++.++|.+ .++.++-+.
T Consensus 1 mi~a~nls~~~-~Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~raV 79 (259)
T COG4559 1 MIRAENLSYSL-AGRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRAV 79 (259)
T ss_pred CeeeeeeEEEe-ecceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhhh
Confidence 47889999876 46889999999999999999999999999999999999999999999999975 234567899
Q ss_pred EcCCCCC-CcCCHHHHhcCCCCCCcccCc--CCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHc
Q 001446 255 VPQRPYT-AVGTLRDQLIYPLTSDQEVEP--LTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 255 v~Q~~~~-~~~tv~~ni~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~ 331 (1075)
+||+..+ |..||+|-+.+|......-.. .+..-..+++..+++..+..+.. .+|||||||||.|||.|.
T Consensus 80 lpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la~R~y--------~~LSGGEqQRVqlARvLa 151 (259)
T COG4559 80 LPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLAGRDY--------RTLSGGEQQRVQLARVLA 151 (259)
T ss_pred cccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhhccch--------hhcCchHHHHHHHHHHHH
Confidence 9999765 778999999998654322111 22223678899999999988865 589999999999999998
Q ss_pred C------CCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 332 H------KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 332 ~------~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
. ++++|+||||||+||......+++..++ .|..|+.|-||+++. .+||+|++|.+
T Consensus 152 Ql~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~ 216 (259)
T COG4559 152 QLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQ 216 (259)
T ss_pred HccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeC
Confidence 5 4569999999999999988888877654 588999999999987 58999999986
No 343
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-36 Score=341.02 Aligned_cols=203 Identities=24% Similarity=0.286 Sum_probs=165.0
Q ss_pred eEEeeeeeeCC--C-ccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc-----CCc
Q 001446 837 ISFSKLDIITP--S-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSG 908 (1075)
Q Consensus 837 I~f~~V~~~yp--~-~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~-----~~r 908 (1075)
|+++||+++|+ + ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+ ..|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 68999999997 2 357999999999999999999999999999999999999999999999999987652 235
Q ss_pred CcEEEEcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc
Q 001446 909 CGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 987 (1075)
Q Consensus 909 ~~i~~VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 987 (1075)
.+|+||||+|.+|. .|+++|+.++... .+.. ....++.+.++++.++|.+.....
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~----------~~~~------~~~~~~~~~~~l~~~gL~~~~~~~-------- 137 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLEL----------AGTP------KAEIKARVTELLELVGLSDKADRY-------- 137 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHH----------cCCC------HHHHHHHHHHHHHHcCCchhhhCC--------
Confidence 67999999999986 6999999864210 0000 000123455677777775443322
Q ss_pred ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCch-hhccceEEEE
Q 001446 988 NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLI 1062 (1075)
Q Consensus 988 ~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i-~~~~~~l~l~ 1062 (1075)
...||||||||++|||||+++|+|||||||||+||..+...+.+.+++ .++|+|+|+|+++.+ ++.|+++.|.
T Consensus 138 --~~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~ 215 (343)
T PRK11153 138 --PAQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVID 215 (343)
T ss_pred --hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 346999999999999999999999999999999999999888776643 389999999999865 5799999997
Q ss_pred cCC
Q 001446 1063 DGE 1065 (1075)
Q Consensus 1063 ~g~ 1065 (1075)
+|.
T Consensus 216 ~G~ 218 (343)
T PRK11153 216 AGR 218 (343)
T ss_pred CCE
Confidence 664
No 344
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=4e-36 Score=329.26 Aligned_cols=198 Identities=25% Similarity=0.353 Sum_probs=163.1
Q ss_pred cEEEEeEEEEcCC--------CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc------
Q 001446 181 YIEFSGVKVVTPT--------GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------ 246 (1075)
Q Consensus 181 ~i~~~~v~~~~~~--------~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~------ 246 (1075)
.|+++||++.|+. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 6899999999852 24799999999999999999999999999999999999999999999998541
Q ss_pred cccccEEEEcCCCC--CCc-CCHHHHhcCCCCCCc-ccCcCCHHHHHHHHHHcCCh-hHHhcCCCCcccCCCCCCChhHH
Q 001446 247 DLNKEIFYVPQRPY--TAV-GTLRDQLIYPLTSDQ-EVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQ 321 (1075)
Q Consensus 247 ~~~~~i~~v~Q~~~--~~~-~tv~~ni~~~~~~~~-~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGqk 321 (1075)
..++.++|+||+|. ++. .|+.+|+.++..... .......+++.++++.+++. +..+..+ .+||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--------~~LS~G~~ 155 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHASYYP--------HMLAPGQK 155 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHhcCc--------hhcCHHHH
Confidence 12357999999984 333 489999876422110 01111234577889999994 5556554 68999999
Q ss_pred HHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 322 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 322 qRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
||++|||||+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 156 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~ 225 (267)
T PRK15112 156 QRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQ 225 (267)
T ss_pred HHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 999999999999999999999999999999999887764 3889999999999986 5999999985
No 345
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-36 Score=322.96 Aligned_cols=196 Identities=23% Similarity=0.353 Sum_probs=166.7
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc----cccccEEEEcC
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVPQ 257 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~----~~~~~i~~v~Q 257 (1075)
++++|+++.|++ +++++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|++|
T Consensus 1 l~~~~l~~~~~~-~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 79 (232)
T cd03300 1 IELENVSKFYGG-FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPPHKRPVNTVFQ 79 (232)
T ss_pred CEEEeEEEEeCC-eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcceEEEec
Confidence 468999999964 5799999999999999999999999999999999999999999999998641 23467999999
Q ss_pred CCCCCcC-CHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCE
Q 001446 258 RPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 336 (1075)
Q Consensus 258 ~~~~~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~i 336 (1075)
++.++.+ |+++|+.++.............++.++++.+++.+..++.+ ..||||||||++||||++.+|++
T Consensus 80 ~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~lS~G~~qrl~laral~~~p~l 151 (232)
T cd03300 80 NYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKP--------SQLSGGQQQRVAIARALVNEPKV 151 (232)
T ss_pred ccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHHHHHHHHhcCCCE
Confidence 9988864 99999986432111111112346678899999998888876 68999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 337 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 337 llLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
+||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .||+++++++
T Consensus 152 lllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~ 206 (232)
T cd03300 152 LLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNK 206 (232)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 999999999999999999887753 3899999999999874 6999999986
No 346
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=1.2e-35 Score=321.20 Aligned_cols=185 Identities=31% Similarity=0.422 Sum_probs=161.9
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCccccccEEEEcCCCC
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPY 260 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q~~~ 260 (1075)
.++++|+++.|+ ++++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.+++ +..++|+||++.
T Consensus 4 ~l~~~~l~~~~~-~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----~~~i~~v~q~~~ 77 (251)
T PRK09544 4 LVSLENVSVSFG-QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----KLRIGYVPQKLY 77 (251)
T ss_pred EEEEeceEEEEC-CceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----ccCEEEeccccc
Confidence 689999999996 46799999999999999999999999999999999999999999999987 347999999987
Q ss_pred CCc---CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCEE
Q 001446 261 TAV---GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFA 337 (1075)
Q Consensus 261 ~~~---~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~il 337 (1075)
++. .|+++++.+.. ...++++.++++.+++.+..++.+ ..||||||||++||||++.+|+++
T Consensus 78 ~~~~l~~~~~~~~~~~~-------~~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgGq~qrv~laral~~~p~ll 142 (251)
T PRK09544 78 LDTTLPLTVNRFLRLRP-------GTKKEDILPALKRVQAGHLIDAPM--------QKLSGGETQRVLLARALLNRPQLL 142 (251)
T ss_pred cccccChhHHHHHhccc-------cccHHHHHHHHHHcCChHHHhCCh--------hhCCHHHHHHHHHHHHHhcCCCEE
Confidence 654 37888875421 123456788999999998887765 689999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHh---c-CCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 338 ILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 338 lLDEpts~LD~~~~~~i~~~l~~---~-~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
||||||++||+.+...+.+.+++ . ++|+|++||+++.+ ..||++++|++
T Consensus 143 lLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~ 196 (251)
T PRK09544 143 VLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH 196 (251)
T ss_pred EEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC
Confidence 99999999999999998887753 2 89999999999987 57999999963
No 347
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=4.4e-36 Score=321.28 Aligned_cols=198 Identities=25% Similarity=0.369 Sum_probs=164.4
Q ss_pred cEEEEeEEEEcCCC---CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCC---CCccEEEeCCcC---cccccc
Q 001446 181 YIEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP---LVSGHIAKPGVG---SDLNKE 251 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~---~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~---~~~G~i~~~~~~---~~~~~~ 251 (1075)
.+.++||++.|++. +++++|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.+ ...++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (226)
T cd03234 3 VLPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKC 82 (226)
T ss_pred cceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhccc
Confidence 36799999999764 689999999999999999999999999999999999999 999999999864 234678
Q ss_pred EEEEcCCCCCCcC-CHHHHhcCCCCCCc--c-cCcCCHHHHHH-HHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHH
Q 001446 252 IFYVPQRPYTAVG-TLRDQLIYPLTSDQ--E-VEPLTHGGMVE-LLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 326 (1075)
Q Consensus 252 i~~v~Q~~~~~~~-tv~~ni~~~~~~~~--~-~~~~~~~~~~~-~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~l 326 (1075)
++|+||++.++.. |++||+.++..... . .......++.+ .++.+++.+..++.+ ..||||||||++|
T Consensus 83 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~l 154 (226)
T cd03234 83 VAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLV--------KGISGGERRRVSI 154 (226)
T ss_pred EEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccc--------cCcCHHHHHHHHH
Confidence 9999999988876 99999987432110 0 01111123344 788888877666554 6899999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecCh--hhHhhCCeEEEEcC
Q 001446 327 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRP--ALVAFHDVVLSLDG 386 (1075)
Q Consensus 327 Aral~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~--~~~~~~d~i~~l~~ 386 (1075)
||||+.+|+++||||||++||+.+...+.+.+++ .+.|+|++||+. +....+|++++|++
T Consensus 155 aral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~ 219 (226)
T cd03234 155 AVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS 219 (226)
T ss_pred HHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC
Confidence 9999999999999999999999999999888754 478999999997 34578999999986
No 348
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=1.4e-36 Score=316.11 Aligned_cols=174 Identities=25% Similarity=0.305 Sum_probs=146.1
Q ss_pred CCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc--------cccccEEEEcCCC--CCC
Q 001446 193 TGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------DLNKEIFYVPQRP--YTA 262 (1075)
Q Consensus 193 ~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~--------~~~~~i~~v~Q~~--~~~ 262 (1075)
+++++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.++|+||+| .++
T Consensus 3 ~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 82 (190)
T TIGR01166 3 GGPEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRPQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLF 82 (190)
T ss_pred CccceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceeEEECCEEccccccchHHHHhhEEEEecChhhccc
Confidence 456799999999999999999999999999999999999999999999998541 2345799999998 466
Q ss_pred cCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeCC
Q 001446 263 VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDEC 342 (1075)
Q Consensus 263 ~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~illLDEp 342 (1075)
..|++||+.++............+++.++++.+++.+..++.+ .+||||||||++|||||+.+|+++|||||
T Consensus 83 ~~tv~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~~~p~llllDEP 154 (190)
T TIGR01166 83 AADVDQDVAFGPLNLGLSEAEVERRVREALTAVGASGLRERPT--------HCLSGGEKKRVAIAGAVAMRPDVLLLDEP 154 (190)
T ss_pred cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCchhhhhCCh--------hhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 7799999987532111111112345678899999988887766 68999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHh---cCCeEEEEecChhh
Q 001446 343 TSAVTTDMEERFCAKVRA---MGTSCITISHRPAL 374 (1075)
Q Consensus 343 ts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~ 374 (1075)
|++||+.+.+.+.+.+++ .|+|+|++||+++.
T Consensus 155 t~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~~ 189 (190)
T TIGR01166 155 TAGLDPAGREQMLAILRRLRAEGMTVVISTHDVDL 189 (190)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeecccc
Confidence 999999999999887754 48899999999864
No 349
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-36 Score=327.29 Aligned_cols=199 Identities=22% Similarity=0.240 Sum_probs=165.7
Q ss_pred CccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCC-----CCccEEEeCCcCc-------
Q 001446 179 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS------- 246 (1075)
Q Consensus 179 ~~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~------- 246 (1075)
...++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|.+.
T Consensus 18 ~~~l~~~nl~~~~~-~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 96 (267)
T PRK14237 18 EIALSTKDLHVYYG-KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINV 96 (267)
T ss_pred CeEEEEeeEEEEEC-CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCCh
Confidence 45799999999995 4789999999999999999999999999999999999996 5899999998641
Q ss_pred -cccccEEEEcCCCCCCcCCHHHHhcCCCCCCccc-CcCCHHHHHHHHHHcCChh----HHhcCCCCcccCCCCCCChhH
Q 001446 247 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGE 320 (1075)
Q Consensus 247 -~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGq 320 (1075)
..++.++|+||++.++..|++||+.++....... ....++++.++++.+++.+ ..++.+ .+|||||
T Consensus 97 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~--------~~LS~G~ 168 (267)
T PRK14237 97 YEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKDDLHKSA--------LTLSGGQ 168 (267)
T ss_pred HHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhhhhcCCc--------ccCCHHH
Confidence 2356799999999888889999998763221110 1112345677888888853 233333 6899999
Q ss_pred HHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 321 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 321 kqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
|||++||||++.+|+++||||||++||+.+...+.+.+++ .+.|+|++||+++.+ ..||++++|++
T Consensus 169 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~ 237 (267)
T PRK14237 169 QQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYL 237 (267)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEEC
Confidence 9999999999999999999999999999999999888764 368999999999887 57999999986
No 350
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-36 Score=318.41 Aligned_cols=200 Identities=22% Similarity=0.291 Sum_probs=161.4
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEcC
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 916 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~VpQ 916 (1075)
|+++|+++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.. ..+.+++|+||
T Consensus 1 l~~~~l~~~~~~-~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~--~~~~~i~~~~q 77 (210)
T cd03269 1 LEVENVTKRFGR-VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI--AARNRIGYLPE 77 (210)
T ss_pred CEEEEEEEEECC-EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH--HHHccEEEecc
Confidence 578999998864 579999999999999999999999999999999999999999999999998764 23557999999
Q ss_pred CCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCCh
Q 001446 917 RPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 995 (1075)
Q Consensus 917 dP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 995 (1075)
+|.+|.+ |+++|+.++... .+.. ....++.+.++++.+++....... ...|||
T Consensus 78 ~~~~~~~~tv~e~l~~~~~~----------~~~~------~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS~ 131 (210)
T cd03269 78 ERGLYPKMKVIDQLVYLAQL----------KGLK------KEEARRRIDEWLERLELSEYANKR----------VEELSK 131 (210)
T ss_pred CCcCCcCCcHHHHHHHHHHH----------cCCC------hHHHHHHHHHHHHHcCChHHHhCc----------HhhCCH
Confidence 9999975 999999753100 0000 001123455677777765433221 346999
Q ss_pred hHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 996 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 996 GQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
|||||++||||++++|+++||||||++||.++...+.+.+++ .++|+|+|+|++..+ ++.|+++.+.+|.
T Consensus 132 G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~ 205 (210)
T cd03269 132 GNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGR 205 (210)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCE
Confidence 999999999999999999999999999999999888776643 478999999999865 6899999996653
No 351
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=5.5e-36 Score=313.94 Aligned_cols=187 Identities=23% Similarity=0.327 Sum_probs=161.4
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----ccccccEEEEc
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYVP 256 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v~ 256 (1075)
++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...+++++|+|
T Consensus 2 l~~~~l~~~~~-~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~i~~~~ 80 (200)
T PRK13540 2 LDVIELDFDYH-DQPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKKDLCTYQKQLCFVG 80 (200)
T ss_pred EEEEEEEEEeC-CeeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCccccCHHHHHhheEEec
Confidence 78999999986 4679999999999999999999999999999999999999999999999864 12356899999
Q ss_pred CCCCCC-cCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCC
Q 001446 257 QRPYTA-VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 335 (1075)
Q Consensus 257 Q~~~~~-~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~ 335 (1075)
|++.++ ..|+++|+.++.... ....++.++++.+++.+..++.+ .+||||||||++||||++++|+
T Consensus 81 q~~~~~~~~tv~~~~~~~~~~~-----~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~~rv~laral~~~p~ 147 (200)
T PRK13540 81 HRSGINPYLTLRENCLYDIHFS-----PGAVGITELCRLFSLEHLIDYPC--------GLLSSGQKRQVALLRLWMSKAK 147 (200)
T ss_pred cccccCcCCCHHHHHHHHHhcC-----cchHHHHHHHHHcCCchhhhCCh--------hhcCHHHHHHHHHHHHHhcCCC
Confidence 999875 579999998763211 12346778999999887666544 5899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHhhCCeEE
Q 001446 336 FAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVL 382 (1075)
Q Consensus 336 illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~~~d~i~ 382 (1075)
++||||||++||+.+.+.+.+.+++ .+.|+|++||+.+.+..+|.-.
T Consensus 148 ~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~ 197 (200)
T PRK13540 148 LWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEE 197 (200)
T ss_pred EEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhh
Confidence 9999999999999999999888764 4889999999999998888644
No 352
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-36 Score=327.68 Aligned_cols=198 Identities=23% Similarity=0.265 Sum_probs=163.7
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCC-----CCccEEEeCCcCc--------
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS-------- 246 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~-------- 246 (1075)
..++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|.+.
T Consensus 20 ~~l~~~~l~~~~~-~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 20 HILEVKDLSIYYG-EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred ceEEEEEEEEEeC-CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 4699999999996 4679999999999999999999999999999999999864 7899999998541
Q ss_pred cccccEEEEcCCCCCCcCCHHHHhcCCCCCCccc-CcCCHHHHHHHHHHcCCh----hHHhcCCCCcccCCCCCCChhHH
Q 001446 247 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLE----YLLDRYPPEKEINWGDELSLGEQ 321 (1075)
Q Consensus 247 ~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~----~~~~~~~~~~~~~~g~~LSgGqk 321 (1075)
..++.++|+||++.++..|++||+.++....... ....++.+.++++.+++. +..++.+ .+||||||
T Consensus 99 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LSgGq~ 170 (268)
T PRK14248 99 NLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHSSA--------LSLSGGQQ 170 (268)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHHHHhcCc--------ccCCHHHH
Confidence 2356799999999988889999998753211110 111234466778888874 3334433 68999999
Q ss_pred HHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 322 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 322 qRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
||++|||||+.+|+++||||||++||+.++..+.+.+++ .++|+|++||+++.+ ..||++++|++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~ 238 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLN 238 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999888765 368999999999976 47999999986
No 353
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-36 Score=325.92 Aligned_cols=197 Identities=25% Similarity=0.293 Sum_probs=163.6
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCC-----CCccEEEeCCcCc--------c
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS--------D 247 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~--------~ 247 (1075)
.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.+. .
T Consensus 4 ~l~~~~l~~~~~-~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~ 82 (251)
T PRK14251 4 IISAKDVHLSYG-NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVE 82 (251)
T ss_pred eEEEEeeEEEEC-CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHH
Confidence 589999999996 4679999999999999999999999999999999999997 4899999998641 2
Q ss_pred ccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccC-cCCHHHHHHHHHHcCCh----hHHhcCCCCcccCCCCCCChhHHH
Q 001446 248 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVE-PLTHGGMVELLKNVDLE----YLLDRYPPEKEINWGDELSLGEQQ 322 (1075)
Q Consensus 248 ~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~-~~~~~~~~~~l~~~~l~----~~~~~~~~~~~~~~g~~LSgGqkq 322 (1075)
+++.++|++|++.++..|++||+.++........ .....++.++++.+++. +..++.+ .+|||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LS~Gq~q 154 (251)
T PRK14251 83 LRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETKDNLDRNA--------QAFSGGQQQ 154 (251)
T ss_pred hhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchHHHhccCh--------hhCCHHHHH
Confidence 3567999999999888999999987532111110 11224566788888884 2233332 689999999
Q ss_pred HHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 323 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 323 Rl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|++|||||+.+|+++||||||++||+.+.+.+.+.+++ .+.|+|++||+++.+. .+|++++|++
T Consensus 155 r~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~ 221 (251)
T PRK14251 155 RICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMN 221 (251)
T ss_pred HHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEEC
Confidence 99999999999999999999999999999999888865 3789999999999875 6999999986
No 354
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.5e-36 Score=342.45 Aligned_cols=205 Identities=18% Similarity=0.254 Sum_probs=169.5
Q ss_pred CCceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCC--CeEecCCCCCccccCCcCcE
Q 001446 834 QDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVS--GSLTKPSQHIDEEAGSGCGI 911 (1075)
Q Consensus 834 ~g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~s--G~I~idg~di~~~~~~r~~i 911 (1075)
.|.|+++||+++|++ ..+|+|+||+|++||.++|+||||||||||+++|.|+++|++ |+|.+||.++......+.+|
T Consensus 3 ~~~l~~~~l~~~~~~-~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~i 81 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA-NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRGL 81 (362)
T ss_pred ceEEEEEEEEEEECC-eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCCE
Confidence 367999999999975 569999999999999999999999999999999999999999 99999999987664445679
Q ss_pred EEEcCCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccc
Q 001446 912 FYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 990 (1075)
Q Consensus 912 ~~VpQdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 990 (1075)
+||+|+|.||+. |+++||.|+..... . .....+..+.++++.++|.++..+. .
T Consensus 82 g~vfQ~~~l~p~~tv~enl~~~l~~~~----------~------~~~~~~~~v~~~l~~~gL~~~~~~~----------~ 135 (362)
T TIGR03258 82 ALLFQNYALFPHLKVEDNVAFGLRAQK----------M------PKADIAERVADALKLVGLGDAAAHL----------P 135 (362)
T ss_pred EEEECCcccCCCCcHHHHHHHHHHHcC----------C------CHHHHHHHHHHHHHhcCCCchhhCC----------h
Confidence 999999999976 99999987532100 0 0000123456678888886655444 2
Q ss_pred cCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----c-CceEEEecCCCCc-hhhccceEEEEcC
Q 001446 991 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----M-GITFVTSSQRPAL-IPFHSLELRLIDG 1064 (1075)
Q Consensus 991 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~-~~TvI~IaHRls~-i~~~~~~l~l~~g 1064 (1075)
..||||||||+||||||+++|++||||||||+||..+...+.+.+++ . |.|+|.|+|+++. ..+.|++++|.+|
T Consensus 136 ~~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G 215 (362)
T TIGR03258 136 AQLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDG 215 (362)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999998877665532 3 7899999999974 6789999999776
Q ss_pred C
Q 001446 1065 E 1065 (1075)
Q Consensus 1065 ~ 1065 (1075)
.
T Consensus 216 ~ 216 (362)
T TIGR03258 216 R 216 (362)
T ss_pred E
Confidence 4
No 355
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-36 Score=324.79 Aligned_cols=202 Identities=23% Similarity=0.248 Sum_probs=163.5
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEcC
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 916 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~VpQ 916 (1075)
|+++|+++.|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++... +.+++|+||
T Consensus 2 l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~---~~~~~~v~q 77 (255)
T PRK11248 2 LQISHLYADYGG-KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP---GAERGVVFQ 77 (255)
T ss_pred EEEEEEEEEeCC-eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC---CCcEEEEeC
Confidence 689999999965 5799999999999999999999999999999999999999999999999987642 245899999
Q ss_pred CCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCCh
Q 001446 917 RPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 995 (1075)
Q Consensus 917 dP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 995 (1075)
+|.+|+ .|+++|+.++... .+.. ....+..+.++++.+++.+..... ...|||
T Consensus 78 ~~~~~~~~tv~e~l~~~~~~----------~~~~------~~~~~~~~~~~l~~~gl~~~~~~~----------~~~LSg 131 (255)
T PRK11248 78 NEGLLPWRNVQDNVAFGLQL----------AGVE------KMQRLEIAHQMLKKVGLEGAEKRY----------IWQLSG 131 (255)
T ss_pred CCccCCCCcHHHHHHhHHHH----------cCCC------HHHHHHHHHHHHHHcCChhHhhCC----------hhhCCH
Confidence 999887 6999999754210 0000 000123456677777775443222 356999
Q ss_pred hHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCch-hhccceEEEEcCCcce
Q 001446 996 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGEGNW 1068 (1075)
Q Consensus 996 GQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i-~~~~~~l~l~~g~g~~ 1068 (1075)
|||||++|||||+++|++|||||||++||.++...+.+.+++ .++|+|+|+|+++.+ .+.|+++.|.+|+|..
T Consensus 132 Gq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i 209 (255)
T PRK11248 132 GQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRV 209 (255)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEE
Confidence 999999999999999999999999999999999888776643 389999999999865 6889999997656654
No 356
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=326.53 Aligned_cols=196 Identities=27% Similarity=0.332 Sum_probs=162.8
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC--ccc-cccEEEEcC
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG--SDL-NKEIFYVPQ 257 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~--~~~-~~~i~~v~Q 257 (1075)
.++++|+++.|++++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ... ++.++|+||
T Consensus 6 ~l~~~~l~~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~i~~v~q 85 (272)
T PRK15056 6 GIVVNDVTVTWRNGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQALQKNLVAYVPQ 85 (272)
T ss_pred eEEEEeEEEEecCCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHHhhccceEEEecc
Confidence 58999999999756789999999999999999999999999999999999999999999999964 112 246999999
Q ss_pred CCCC---CcCCHHHHhcCCCCCC-c---ccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHH
Q 001446 258 RPYT---AVGTLRDQLIYPLTSD-Q---EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 330 (1075)
Q Consensus 258 ~~~~---~~~tv~~ni~~~~~~~-~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral 330 (1075)
+|.+ +..++++|+.++.... . .......+++.++++.+++.+..++.+ .+||||||||++|||||
T Consensus 86 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgG~~qrv~laraL 157 (272)
T PRK15056 86 SEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI--------GELSGGQKKRVFLARAI 157 (272)
T ss_pred ccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc--------ccCCHHHHHHHHHHHHH
Confidence 9864 3457899987642110 0 001112345677889999988777765 68999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhH-hhCCeEEEE
Q 001446 331 YHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSL 384 (1075)
Q Consensus 331 ~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~-~~~d~i~~l 384 (1075)
+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ ..||+++.+
T Consensus 158 ~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~ 215 (272)
T PRK15056 158 AQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV 215 (272)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999888754 488999999999876 579999777
No 357
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=8.4e-36 Score=314.13 Aligned_cols=192 Identities=28% Similarity=0.356 Sum_probs=164.1
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc---cccccEEEEcC
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---DLNKEIFYVPQ 257 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~---~~~~~i~~v~Q 257 (1075)
.++++|+++.|++ +.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|++|
T Consensus 2 ~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (207)
T PRK13539 2 MLEGEDLACVRGG-RVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDDPDVAEACHYLGH 80 (207)
T ss_pred EEEEEeEEEEECC-eEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcchhhHhhcEEecC
Confidence 4789999999964 5799999999999999999999999999999999999999999999998641 14567999998
Q ss_pred CCCCC-cCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCE
Q 001446 258 RPYTA-VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 336 (1075)
Q Consensus 258 ~~~~~-~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~i 336 (1075)
++.++ ..|++||+.+..... ...+.++.++++.+++.+..+..+ .+||||||||++||||++++|++
T Consensus 81 ~~~~~~~~tv~~~l~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~la~al~~~p~l 148 (207)
T PRK13539 81 RNAMKPALTVAENLEFWAAFL----GGEELDIAAALEAVGLAPLAHLPF--------GYLSAGQKRRVALARLLVSNRPI 148 (207)
T ss_pred CCcCCCCCcHHHHHHHHHHhc----CCcHHHHHHHHHHcCCHHHHcCCh--------hhcCHHHHHHHHHHHHHhcCCCE
Confidence 87664 579999997643211 112345788999999987766544 68999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 337 AILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 337 llLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
+||||||++||+.+...+.+.+++ .|+|+|++||+.+.+.. |+++.++.
T Consensus 149 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~-~~~~~~~~ 200 (207)
T PRK13539 149 WILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG-ARELDLGP 200 (207)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc-CcEEeecC
Confidence 999999999999999999888764 48999999999999887 99988753
No 358
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=6.2e-36 Score=339.63 Aligned_cols=207 Identities=31% Similarity=0.428 Sum_probs=175.4
Q ss_pred CccEEEEeEEEEcCC------C----CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC---
Q 001446 179 ANYIEFSGVKVVTPT------G----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG--- 245 (1075)
Q Consensus 179 ~~~i~~~~v~~~~~~------~----~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~--- 245 (1075)
.+.++++|+++.|.. + ..+++||||++.+||+++|||+||||||||.|+|+|+.+|++|+|.++|.+
T Consensus 278 ~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~ 357 (539)
T COG1123 278 EPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDL 357 (539)
T ss_pred CceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCccccc
Confidence 456889999998863 1 368999999999999999999999999999999999999999999999864
Q ss_pred -----ccccccEEEEcCCCCC---CcCCHHHHhcCCCCCCccc-CcCCHHHHHHHHHHcCChh-HHhcCCCCcccCCCCC
Q 001446 246 -----SDLNKEIFYVPQRPYT---AVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEY-LLDRYPPEKEINWGDE 315 (1075)
Q Consensus 246 -----~~~~~~i~~v~Q~~~~---~~~tv~~ni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~g~~ 315 (1075)
...++++-++||+|+. +..||+++|..+....... .....+++.++++.++|.. +++++| ++
T Consensus 358 ~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~~~l~ryP--------~e 429 (539)
T COG1123 358 TGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLPPEFLDRYP--------HE 429 (539)
T ss_pred ccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCCHHHHhcCc--------hh
Confidence 2345789999999974 4469999998876533221 1223456888999999987 789998 69
Q ss_pred CChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcCCCcE
Q 001446 316 LSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGEGEW 390 (1075)
Q Consensus 316 LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~~g~~ 390 (1075)
||||||||+||||||..+|+++++|||||+||+.+...+.+.+++ .|.|.|+||||+..++ .||+|.+|.+ |.
T Consensus 430 lSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~--G~ 507 (539)
T COG1123 430 LSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYD--GR 507 (539)
T ss_pred cCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEEC--Ce
Confidence 999999999999999999999999999999999999999887753 5999999999999997 5999999986 34
Q ss_pred EEecC
Q 001446 391 RVHDK 395 (1075)
Q Consensus 391 ~~~~~ 395 (1075)
+++.+
T Consensus 508 iVE~G 512 (539)
T COG1123 508 IVEEG 512 (539)
T ss_pred EEEeC
Confidence 55443
No 359
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-36 Score=332.93 Aligned_cols=200 Identities=21% Similarity=0.217 Sum_probs=163.4
Q ss_pred eEEeeeeeeCCCc----cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc------cC
Q 001446 837 ISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE------AG 906 (1075)
Q Consensus 837 I~f~~V~~~yp~~----~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~------~~ 906 (1075)
|+|+||++.|+.. +++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++... ..
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 7899999999743 3699999999999999999999999999999999999999999999999998531 23
Q ss_pred CcCcEEEEcCCC--CCCCcchhhhhcCCCC---hHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCch-hhhhhhc
Q 001446 907 SGCGIFYVPQRP--YTCLGTLRDQIIYPLS---REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS-YLLEREE 980 (1075)
Q Consensus 907 ~r~~i~~VpQdP--~Lf~gTir~NL~~p~~---~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~-~~i~~~~ 980 (1075)
.|.+++||+|+| .+|..|+.+|+.++.. .... ..+..+.++++.++|. .+..+
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~-------------------~~~~~~~~~l~~~~L~~~~~~~-- 140 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKE-------------------KAEKIAAEKLEMVGLADEFWEK-- 140 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHH-------------------HHHHHHHHHHHHcCCChhhccC--
Confidence 456799999998 7899999999976321 0000 0123455667777763 22221
Q ss_pred cCCccccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCch-hhcc
Q 001446 981 VGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHS 1056 (1075)
Q Consensus 981 ~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i-~~~~ 1056 (1075)
....||||||||++|||||+.+|+||||||||++||+++...+.+.+++ .++|||+|+|+++.+ .+.|
T Consensus 141 --------~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~d 212 (288)
T PRK13643 141 --------SPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYAD 212 (288)
T ss_pred --------CcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCC
Confidence 1356999999999999999999999999999999999999887776543 489999999999865 7899
Q ss_pred ceEEEEcCC
Q 001446 1057 LELRLIDGE 1065 (1075)
Q Consensus 1057 ~~l~l~~g~ 1065 (1075)
+++.|.+|.
T Consensus 213 ri~~l~~G~ 221 (288)
T PRK13643 213 YVYLLEKGH 221 (288)
T ss_pred EEEEEECCE
Confidence 999997765
No 360
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=5.1e-36 Score=323.05 Aligned_cols=202 Identities=18% Similarity=0.276 Sum_probs=162.1
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc-CCcCcEEEEc
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-GSGCGIFYVP 915 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~-~~r~~i~~Vp 915 (1075)
|+++|+++.|++ +++|+|+||+|++||.+||+||||||||||+++|.|+++|.+|+|.+||.++...+ ..+.+++|+|
T Consensus 2 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~~~ 80 (236)
T TIGR03864 2 LEVAGLSFAYGA-RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGVVF 80 (236)
T ss_pred EEEEeeEEEECC-EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEEeC
Confidence 689999999974 57999999999999999999999999999999999999999999999999887542 2234799999
Q ss_pred CCCCC-CCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCC
Q 001446 916 QRPYT-CLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 994 (1075)
Q Consensus 916 QdP~L-f~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 994 (1075)
|+|.+ +..|+++|+.++..... . .....++.+.++++.+++...... ....||
T Consensus 81 q~~~~~~~~t~~~~l~~~~~~~~----------~------~~~~~~~~~~~~l~~~gl~~~~~~----------~~~~LS 134 (236)
T TIGR03864 81 QQPTLDLDLSVRQNLRYHAALHG----------L------SRAEARERIAALLARLGLAERADD----------KVRELN 134 (236)
T ss_pred CCCCCcccCcHHHHHHHHHHhcC----------C------CHHHHHHHHHHHHHHcCChhhhcC----------ChhhCC
Confidence 99988 56799999975321000 0 000012334566677766433221 134699
Q ss_pred hhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 995 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 995 gGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
||||||++||||++++|+|+||||||++||.++...+.+.+++ .++|+|+|+|+++.+...|+++.|.+|.
T Consensus 135 ~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~ 209 (236)
T TIGR03864 135 GGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGR 209 (236)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCe
Confidence 9999999999999999999999999999999999888776543 4899999999999888899999997664
No 361
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-36 Score=329.36 Aligned_cols=204 Identities=22% Similarity=0.316 Sum_probs=166.3
Q ss_pred ceEEeeeeeeCCC-ccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEE
Q 001446 836 SISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIF 912 (1075)
Q Consensus 836 ~I~f~~V~~~yp~-~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~ 912 (1075)
.|+++|+++.|++ .+++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++...+ .+|.+++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 5899999999974 568999999999999999999999999999999999999999999999999987542 3466799
Q ss_pred EEcCCC--CCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccc
Q 001446 913 YVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 990 (1075)
Q Consensus 913 ~VpQdP--~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 990 (1075)
|+||+| .++..|+++||.++.... +. ......+.+.++++.++|.+..... .
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~ 140 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENK----------KV------PPKKMKDIIDDLAKKVGMEDYLDKE----------P 140 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHc----------CC------CHHHHHHHHHHHHHHcCCHHHhhCC----------c
Confidence 999999 466789999997632100 00 0000122345667777775544332 2
Q ss_pred cCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---c-CceEEEecCCCCchhhccceEEEEcCC
Q 001446 991 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---M-GITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 991 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~-~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
..||||||||++|||||+++|++|||||||++||..+...+.+.+++ . ++|+|+++|+++.+.+.|+++.|.+|.
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~ 219 (271)
T PRK13632 141 QNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGK 219 (271)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCE
Confidence 56999999999999999999999999999999999999888777643 2 589999999999888999999997765
No 362
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=5.1e-36 Score=325.26 Aligned_cols=197 Identities=24% Similarity=0.305 Sum_probs=160.7
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCC--CCCccEEEeCCcCc------c-ccccE
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLW--PLVSGHIAKPGVGS------D-LNKEI 252 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~--~~~~G~i~~~~~~~------~-~~~~i 252 (1075)
|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+. +|++|+|.++|.+. . .+..+
T Consensus 1 l~~~~l~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 79 (243)
T TIGR01978 1 LKIKDLHVSVE-DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGL 79 (243)
T ss_pred CeEeeEEEEEC-CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccce
Confidence 46899999996 467999999999999999999999999999999999994 79999999998641 1 13359
Q ss_pred EEEcCCCCCCcC-CHHHHhcCCCCCCcc-------cCcCCHHHHHHHHHHcCChh-HHhcCCCCcccCCCCCCChhHHHH
Q 001446 253 FYVPQRPYTAVG-TLRDQLIYPLTSDQE-------VEPLTHGGMVELLKNVDLEY-LLDRYPPEKEINWGDELSLGEQQR 323 (1075)
Q Consensus 253 ~~v~Q~~~~~~~-tv~~ni~~~~~~~~~-------~~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~g~~LSgGqkqR 323 (1075)
+|+||+|.++.. |+++|+.+....... ......+++.++++.+++.+ ..++.+ ...||||||||
T Consensus 80 ~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-------~~~LS~G~~qr 152 (243)
T TIGR01978 80 FLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSV-------NEGFSGGEKKR 152 (243)
T ss_pred EeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhccccc-------ccCcCHHHHHH
Confidence 999999987765 999999764221100 00111345678888999973 445543 12599999999
Q ss_pred HHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHhh--CCeEEEEcC
Q 001446 324 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAF--HDVVLSLDG 386 (1075)
Q Consensus 324 l~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~~--~d~i~~l~~ 386 (1075)
++|||||+.+|+++||||||++||+.+++.+.+.+++ .|+|+|++||+++.+.. ||++++|++
T Consensus 153 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~ 220 (243)
T TIGR01978 153 NEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLD 220 (243)
T ss_pred HHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeC
Confidence 9999999999999999999999999999999888764 47899999999999864 799999986
No 363
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-36 Score=324.62 Aligned_cols=199 Identities=21% Similarity=0.209 Sum_probs=164.6
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCC-----CccEEEeCCcCc--------
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS-------- 246 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~-------- 246 (1075)
..++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+.+| ++|+|.++|.+.
T Consensus 3 ~~l~~~~l~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 3 IKMESKNLNLWYG-EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred cEEEEEEeEEEEC-CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 3689999999996 46799999999999999999999999999999999999875 799999998641
Q ss_pred cccccEEEEcCCCCCCcCCHHHHhcCCCCCCcc-cCcCCHHHHHHHHHHcCChh----HHhcCCCCcccCCCCCCChhHH
Q 001446 247 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQ 321 (1075)
Q Consensus 247 ~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGqk 321 (1075)
..++.++|+||++.++..|++||+.++...... ......+++.++++.+++.+ ..++.+ ..||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LS~G~~ 153 (251)
T PRK14270 82 ELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDDLKKSA--------LKLSGGQQ 153 (251)
T ss_pred HHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhHhhCCc--------ccCCHHHH
Confidence 235679999999998889999999875322111 01112345667888888743 333333 68999999
Q ss_pred HHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CCeEEEEecChhhHh-hCCeEEEEcCC
Q 001446 322 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVA-FHDVVLSLDGE 387 (1075)
Q Consensus 322 qRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~~ 387 (1075)
||++||||++.+|+++||||||++||+.+...+.+.+++. ++|+|++||+++.+. .||++++++++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G 222 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMG 222 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECC
Confidence 9999999999999999999999999999999998887652 689999999999875 69999999863
No 364
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-36 Score=325.98 Aligned_cols=198 Identities=22% Similarity=0.236 Sum_probs=163.4
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCC--C---CccEEEeCCcCc--------
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP--L---VSGHIAKPGVGS-------- 246 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~--~---~~G~i~~~~~~~-------- 246 (1075)
..++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|.+.
T Consensus 11 ~~l~i~~l~~~~~-~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 11 EVYQINGMNLWYG-QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred ceEEEeeEEEEEC-CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 4799999999986 4579999999999999999999999999999999999987 3 699999998641
Q ss_pred cccccEEEEcCCCCCCcCCHHHHhcCCCCCCccc-CcCCHHHHHHHHHHcCChhH----HhcCCCCcccCCCCCCChhHH
Q 001446 247 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQ 321 (1075)
Q Consensus 247 ~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~g~~LSgGqk 321 (1075)
.+++.++|+||++.++..|++||+.++....... .....+++.++++.+++.+. .++. ..+||||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~--------~~~LS~Gq~ 161 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHTQ--------ALSLSGGQQ 161 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhhhhCC--------cccCCHHHH
Confidence 2356799999999988889999998753221110 01112345677888888542 3332 368999999
Q ss_pred HHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 322 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 322 qRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
||++|||||+.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+. .||++++|++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~ 229 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYM 229 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999888765 3789999999999874 7999999986
No 365
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=325.15 Aligned_cols=197 Identities=19% Similarity=0.250 Sum_probs=166.6
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCC---ccEEEeCCcCc-----------
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV---SGHIAKPGVGS----------- 246 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~---~G~i~~~~~~~----------- 246 (1075)
.++++||++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.+.
T Consensus 4 ~l~~~nl~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (262)
T PRK09984 4 IIRVEKLAKTFN-QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIR 82 (262)
T ss_pred EEEEeeEEEEeC-CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHH
Confidence 689999999986 568999999999999999999999999999999999999986 49999999541
Q ss_pred cccccEEEEcCCCCCCc-CCHHHHhcCCCCCCc--------ccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCC
Q 001446 247 DLNKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQ--------EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELS 317 (1075)
Q Consensus 247 ~~~~~i~~v~Q~~~~~~-~tv~~ni~~~~~~~~--------~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LS 317 (1075)
.+++.++|+||++.++. .|+++|+.++..... ........++.++++.+++.+..++.+ .+||
T Consensus 83 ~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS 154 (262)
T PRK09984 83 KSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV--------STLS 154 (262)
T ss_pred HHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc--------cccC
Confidence 12457999999998776 599999987532110 001112346788999999988777765 6899
Q ss_pred hhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 318 LGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 318 gGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
||||||++|||||+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ ..||+++++++
T Consensus 155 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~ 228 (262)
T PRK09984 155 GGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQ 228 (262)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999888764 379999999999975 67999999986
No 366
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=3e-36 Score=324.47 Aligned_cols=202 Identities=22% Similarity=0.325 Sum_probs=162.8
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc---CCcCcEEE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIFY 913 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~---~~r~~i~~ 913 (1075)
|+++||++.|++ +++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++...+ ..+.+++|
T Consensus 1 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (232)
T cd03218 1 LRAENLSKRYGK-RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIGY 79 (232)
T ss_pred CeEEEEEEEeCC-EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEEE
Confidence 578999999974 56999999999999999999999999999999999999999999999999887653 23456999
Q ss_pred EcCCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccC
Q 001446 914 VPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 992 (1075)
Q Consensus 914 VpQdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~ 992 (1075)
+||+|.+|++ |+++|+.++.... +. .....+..+.++++.+++.+.... ....
T Consensus 80 ~~q~~~~~~~~tv~~~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~----------~~~~ 133 (232)
T cd03218 80 LPQEASIFRKLTVEENILAVLEIR----------GL------SKKEREEKLEELLEEFHITHLRKS----------KASS 133 (232)
T ss_pred ecCCccccccCcHHHHHHHHHHhc----------CC------CHHHHHHHHHHHHHHcCChhhhhC----------Chhh
Confidence 9999999987 9999997532100 00 000012334566677666443222 1356
Q ss_pred CChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCC-chhhccceEEEEcCC
Q 001446 993 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPA-LIPFHSLELRLIDGE 1065 (1075)
Q Consensus 993 LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls-~i~~~~~~l~l~~g~ 1065 (1075)
||+|||||++||||++++|++|||||||++||.++.+.+.+.+++ .++|+|+++|+++ ..++.|+++.|.+|.
T Consensus 134 LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~ 210 (232)
T cd03218 134 LSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGK 210 (232)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 999999999999999999999999999999999999888776643 4899999999995 677899999997765
No 367
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-36 Score=324.65 Aligned_cols=203 Identities=25% Similarity=0.267 Sum_probs=163.0
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEEEE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFYV 914 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~~V 914 (1075)
++++||++.|++..++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++...+ ..+.+++|+
T Consensus 1 l~~~~l~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (242)
T cd03295 1 IEFENVTKRYGGGKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGYV 80 (242)
T ss_pred CEEEEEEEEeCCcceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEEE
Confidence 478999999975356999999999999999999999999999999999999999999999999887642 345679999
Q ss_pred cCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchh--hhhhhccCCcccccccc
Q 001446 915 PQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSY--LLEREEVGWDANLNWED 991 (1075)
Q Consensus 915 pQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~--~i~~~~~Gldt~~~~g~ 991 (1075)
||+|.+|. .|+++|+.++... .+.. ....++.+.++++.+++.. .... ...
T Consensus 81 ~q~~~~~~~~tv~e~l~~~~~~----------~~~~------~~~~~~~~~~~l~~l~l~~~~~~~~----------~~~ 134 (242)
T cd03295 81 IQQIGLFPHMTVEENIALVPKL----------LKWP------KEKIRERADELLALVGLDPAEFADR----------YPH 134 (242)
T ss_pred ccCccccCCCcHHHHHHHHHHH----------cCCC------HHHHHHHHHHHHHHcCCCcHHHHhc----------Chh
Confidence 99999996 6999999753110 0000 0001234556777777642 2111 135
Q ss_pred CCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCc-hhhccceEEEEcCC
Q 001446 992 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPAL-IPFHSLELRLIDGE 1065 (1075)
Q Consensus 992 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~-i~~~~~~l~l~~g~ 1065 (1075)
+||||||||++||||++++|++|||||||++||.++...+.+.+++ .++|+|+|+|+++. .++.|+++.|.+|.
T Consensus 135 ~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~ 213 (242)
T cd03295 135 ELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGE 213 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 7999999999999999999999999999999999998887766543 38999999999984 57899999998765
No 368
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=2.8e-36 Score=322.57 Aligned_cols=200 Identities=22% Similarity=0.338 Sum_probs=158.8
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc---CCcCcEEE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIFY 913 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~---~~r~~i~~ 913 (1075)
|+++||++.|++ .++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++...+ ..|.+++|
T Consensus 1 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (222)
T cd03224 1 LEVENLNAGYGK-SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIGY 79 (222)
T ss_pred CEEeeEEeecCC-eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeEE
Confidence 578999999975 47999999999999999999999999999999999999999999999999887653 23457999
Q ss_pred EcCCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhC-CchhhhhhhccCCcccccccc
Q 001446 914 VPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGV-RLSYLLEREEVGWDANLNWED 991 (1075)
Q Consensus 914 VpQdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~-~L~~~i~~~~~Gldt~~~~g~ 991 (1075)
+||+|.+|.+ |+++|+.++....... .....+.++++.+ ++.+. ++. ...
T Consensus 80 ~~q~~~~~~~~t~~~~l~~~~~~~~~~------------------~~~~~~~~~l~~~~~l~~~-------~~~---~~~ 131 (222)
T cd03224 80 VPEGRRIFPELTVEENLLLGAYARRRA------------------KRKARLERVYELFPRLKER-------RKQ---LAG 131 (222)
T ss_pred eccccccCCCCcHHHHHHHHhhhcCch------------------hHHHHHHHHHHHHHhhhhh-------hhC---chh
Confidence 9999999987 9999997642110000 0011223334433 12111 121 134
Q ss_pred CCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCc-hhhccceEEEEcCC
Q 001446 992 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPAL-IPFHSLELRLIDGE 1065 (1075)
Q Consensus 992 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~-i~~~~~~l~l~~g~ 1065 (1075)
.||||||||++||||++++|++|||||||++||.++...+.+.+++ .++|+|+++|+++. .++.|+++.+.+|.
T Consensus 132 ~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 209 (222)
T cd03224 132 TLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGR 209 (222)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCe
Confidence 6999999999999999999999999999999999999888777643 47999999999985 57899999997654
No 369
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=324.62 Aligned_cols=196 Identities=24% Similarity=0.319 Sum_probs=165.0
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCC--------ccEEEeCCcCc------c
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV--------SGHIAKPGVGS------D 247 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~--------~G~i~~~~~~~------~ 247 (1075)
|+++|+++.|. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.+. .
T Consensus 2 l~~~nl~~~~~-~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (272)
T PRK13547 2 LTADHLHVARR-HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPR 80 (272)
T ss_pred eEEEEEEEEEC-CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHH
Confidence 78999999985 468999999999999999999999999999999999999998 99999998641 2
Q ss_pred ccccEEEEcCCCC-CCcCCHHHHhcCCCCCC----cccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHH
Q 001446 248 LNKEIFYVPQRPY-TAVGTLRDQLIYPLTSD----QEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQ 322 (1075)
Q Consensus 248 ~~~~i~~v~Q~~~-~~~~tv~~ni~~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkq 322 (1075)
+++.++|+||++. ++..|++||+.++.... ........+.+.++++.+++.+..++.+ .+|||||||
T Consensus 81 ~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~q 152 (272)
T PRK13547 81 LARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDV--------TTLSGGELA 152 (272)
T ss_pred HHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCc--------ccCCHHHHH
Confidence 3456899999986 46689999998753211 0001112345678899999988777655 689999999
Q ss_pred HHHHHHHHc---------CCCCEEEEeCCCCCCCHHHHHHHHHHHHh---c-CCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 323 RLGMARLFY---------HKPKFAILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 323 Rl~lAral~---------~~p~illLDEpts~LD~~~~~~i~~~l~~---~-~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|++|||||+ .+|+++||||||++||+.+.+.+.+.+++ . |+|+|+|||+++.+. .||++++|++
T Consensus 153 rv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~ 230 (272)
T PRK13547 153 RVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLAD 230 (272)
T ss_pred HHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 999999999 59999999999999999999999887753 2 789999999999885 7999999986
No 370
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-36 Score=342.87 Aligned_cols=203 Identities=20% Similarity=0.332 Sum_probs=166.4
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEc
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 915 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~Vp 915 (1075)
.|+++|+++.|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++......+.+++|||
T Consensus 3 ~l~i~~l~~~~~~-~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~v~ 81 (369)
T PRK11000 3 SVTLRNVTKAYGD-VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGMVF 81 (369)
T ss_pred EEEEEEEEEEeCC-eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEEEe
Confidence 4899999999964 569999999999999999999999999999999999999999999999999876644456799999
Q ss_pred CCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCC
Q 001446 916 QRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 994 (1075)
Q Consensus 916 QdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 994 (1075)
|+|.+|+. |+++|+.|+.... +. .....++.+.++++.++|.++..+. ...||
T Consensus 82 Q~~~l~~~~tv~eni~~~~~~~----------~~------~~~~~~~~~~~~l~~lgL~~~~~~~----------~~~LS 135 (369)
T PRK11000 82 QSYALYPHLSVAENMSFGLKLA----------GA------KKEEINQRVNQVAEVLQLAHLLDRK----------PKALS 135 (369)
T ss_pred CCcccCCCCCHHHHHHhHHhhc----------CC------CHHHHHHHHHHHHHHcCChhhhcCC----------hhhCC
Confidence 99999975 9999998753100 00 0000123456677888875544332 24699
Q ss_pred hhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCC-chhhccceEEEEcCC
Q 001446 995 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPA-LIPFHSLELRLIDGE 1065 (1075)
Q Consensus 995 gGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls-~i~~~~~~l~l~~g~ 1065 (1075)
||||||++|||||+++|++||||||||+||..+...+.+.+++ .+.|+|+|+|+++ ...+.|+++.|.+|.
T Consensus 136 gGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~ 211 (369)
T PRK11000 136 GGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGR 211 (369)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999998877665532 4899999999997 457899999997764
No 371
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.7e-36 Score=323.02 Aligned_cols=203 Identities=22% Similarity=0.291 Sum_probs=164.4
Q ss_pred eEEeeeeeeCCCc---cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc-----CCc
Q 001446 837 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSG 908 (1075)
Q Consensus 837 I~f~~V~~~yp~~---~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~-----~~r 908 (1075)
|+++|+++.|++. .++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.+||.++...+ ..+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 6899999999754 27999999999999999999999999999999999999999999999999887542 125
Q ss_pred CcEEEEcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc
Q 001446 909 CGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 987 (1075)
Q Consensus 909 ~~i~~VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 987 (1075)
.+++|+||+|.+|. .|+++|+.++... .+. ......+.+.++++.+++.+.....
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~----------~~~------~~~~~~~~~~~~l~~~~l~~~~~~~-------- 137 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEI----------AGV------PKAEIEERVLELLELVGLEDKADAY-------- 137 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHH----------cCC------CHHHHHHHHHHHHHHCCChhhhhcC--------
Confidence 67999999999997 6999999753110 000 0000123456677777775443322
Q ss_pred ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCch-hhccceEEEE
Q 001446 988 NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLI 1062 (1075)
Q Consensus 988 ~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i-~~~~~~l~l~ 1062 (1075)
...||+|||||++||||++++|++|||||||++||..+...+.+.+++ .++|+|+|+|+++.+ ++.|+++.|.
T Consensus 138 --~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 138 --PAQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 346999999999999999999999999999999999999888776643 389999999999875 6789999997
Q ss_pred cCC
Q 001446 1063 DGE 1065 (1075)
Q Consensus 1063 ~g~ 1065 (1075)
+|.
T Consensus 216 ~G~ 218 (233)
T cd03258 216 KGE 218 (233)
T ss_pred CCE
Confidence 664
No 372
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-36 Score=325.33 Aligned_cols=197 Identities=26% Similarity=0.321 Sum_probs=162.6
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCC-----CccEEEeCCcCc--------c
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS--------D 247 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~--------~ 247 (1075)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.+. .
T Consensus 4 ~l~~~~l~~~~~-~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 82 (253)
T PRK14267 4 AIETVNLRVYYG-SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIE 82 (253)
T ss_pred eEEEEeEEEEeC-CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHH
Confidence 589999999996 46799999999999999999999999999999999999987 499999998541 2
Q ss_pred ccccEEEEcCCCCCCcC-CHHHHhcCCCCCCcc--cCcCCHHHHHHHHHHcCChh----HHhcCCCCcccCCCCCCChhH
Q 001446 248 LNKEIFYVPQRPYTAVG-TLRDQLIYPLTSDQE--VEPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGE 320 (1075)
Q Consensus 248 ~~~~i~~v~Q~~~~~~~-tv~~ni~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGq 320 (1075)
++++++|+||++.++.. |++||+.++...... .....++++.++++.+++.. ..++.+ .+|||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LS~G~ 154 (253)
T PRK14267 83 VRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKDRLNDYP--------SNLSGGQ 154 (253)
T ss_pred HhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhhhhccCh--------hhCCHHH
Confidence 34679999999988865 999999875321110 01112245677888888753 233333 6899999
Q ss_pred HHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 321 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 321 kqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|||++|||||+.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+. .||++++|++
T Consensus 155 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 223 (253)
T PRK14267 155 RQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYL 223 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEEC
Confidence 9999999999999999999999999999999999888765 3689999999999864 6999999986
No 373
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-36 Score=325.37 Aligned_cols=209 Identities=19% Similarity=0.215 Sum_probs=166.1
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCC---CCCCeEecCCCCCcccc--CCcCc
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP---VVSGSLTKPSQHIDEEA--GSGCG 910 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~---~~sG~I~idg~di~~~~--~~r~~ 910 (1075)
.|+++||++.|++ +++|+|+||+|++||.++|+|+||||||||+++|.|+++ |++|+|.+||.++...+ ..|.+
T Consensus 2 ~~~~~~l~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~ 80 (246)
T PRK14269 2 IAKTTNLNLFYGK-KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKN 80 (246)
T ss_pred ceeeeeeEEEECC-EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhh
Confidence 3789999999974 579999999999999999999999999999999999985 68999999999987652 34667
Q ss_pred EEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccc
Q 001446 911 IFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 990 (1075)
Q Consensus 911 i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 990 (1075)
++|+||+|.+|+.|+++|+.++..... . . ......++.+.++++.+++...+... ++ ...
T Consensus 81 i~~~~q~~~l~~~tv~eni~~~~~~~~----------~---~-~~~~~~~~~~~~~l~~~~l~~~~~~~---~~---~~~ 140 (246)
T PRK14269 81 VGMVFQQPNVFVKSIYENISYAPKLHG----------M---I-KNKDEEEALVVDCLQKVGLFEEVKDK---LK---QNA 140 (246)
T ss_pred EEEEecCCccccccHHHHhhhHHhhcC----------c---c-cChHHHHHHHHHHHHHcCCChhhhHH---hc---CCc
Confidence 999999999999999999976421000 0 0 00001133456677777774322111 01 124
Q ss_pred cCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCc-hhhccceEEEEcCC
Q 001446 991 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPAL-IPFHSLELRLIDGE 1065 (1075)
Q Consensus 991 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~-i~~~~~~l~l~~g~ 1065 (1075)
..||+|||||++||||++++|++|||||||++||.++...+.+.+++ .++|+|+|+|+++. .++.|+++.|.+|.
T Consensus 141 ~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~ 218 (246)
T PRK14269 141 LALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGE 218 (246)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCE
Confidence 57999999999999999999999999999999999999888777654 48999999999985 56899999997765
No 374
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=324.02 Aligned_cols=198 Identities=23% Similarity=0.268 Sum_probs=162.9
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCC--CC---CccEEEeCCcCc--------c
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLW--PL---VSGHIAKPGVGS--------D 247 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~--~~---~~G~i~~~~~~~--------~ 247 (1075)
.++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+. +| ++|+|.++|.+. .
T Consensus 5 ~l~~~~l~~~~~-~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 83 (252)
T PRK14239 5 ILQVSDLSVYYN-KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVD 83 (252)
T ss_pred eEEEEeeEEEEC-CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHh
Confidence 689999999996 467999999999999999999999999999999999985 36 599999998531 2
Q ss_pred ccccEEEEcCCCCCCcCCHHHHhcCCCCCCccc-CcCCHHHHHHHHHHcCChh----HHhcCCCCcccCCCCCCChhHHH
Q 001446 248 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQQ 322 (1075)
Q Consensus 248 ~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGqkq 322 (1075)
+++.++|+||+|.++..|++||+.++....... ....++++.++++.+++.. ..++.+ .+|||||||
T Consensus 84 ~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LS~G~~q 155 (252)
T PRK14239 84 LRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKDRLHDSA--------LGLSGGQQQ 155 (252)
T ss_pred hhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHHHHhcCc--------ccCCHHHHH
Confidence 356799999999988899999998653211111 1112345667788888743 334433 689999999
Q ss_pred HHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhH-hhCCeEEEEcCC
Q 001446 323 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDGE 387 (1075)
Q Consensus 323 Rl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~-~~~d~i~~l~~~ 387 (1075)
|++||||++.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+ ..||++++|+++
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G 223 (252)
T PRK14239 156 RVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDG 223 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECC
Confidence 99999999999999999999999999999999988865 368999999999876 579999999863
No 375
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=4.6e-36 Score=339.66 Aligned_cols=200 Identities=25% Similarity=0.320 Sum_probs=169.0
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEc
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 915 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~Vp 915 (1075)
.|+++|++++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++......+.+++||+
T Consensus 14 ~L~l~~l~~~~~~-~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~vf 92 (375)
T PRK09452 14 LVELRGISKSFDG-KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVNTVF 92 (375)
T ss_pred eEEEEEEEEEECC-eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 5899999999964 569999999999999999999999999999999999999999999999999987654456799999
Q ss_pred CCCCCCCc-chhhhhcCCCCh---HHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccccccc
Q 001446 916 QRPYTCLG-TLRDQIIYPLSR---EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 991 (1075)
Q Consensus 916 QdP~Lf~g-Tir~NL~~p~~~---~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~ 991 (1075)
|++.||+. |+++||.|+... ... ..+..+.++++.++|.++..+.| .
T Consensus 93 Q~~~lfp~ltv~eNi~~~l~~~~~~~~-------------------~~~~~~~~~l~~~~l~~~~~~~p----------~ 143 (375)
T PRK09452 93 QSYALFPHMTVFENVAFGLRMQKTPAA-------------------EITPRVMEALRMVQLEEFAQRKP----------H 143 (375)
T ss_pred cCcccCCCCCHHHHHHHHHhhcCCCHH-------------------HHHHHHHHHHHHcCCchhhhCCh----------h
Confidence 99999975 999999876421 000 01234566778888866655443 4
Q ss_pred CCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCC-chhhccceEEEEcCC
Q 001446 992 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPA-LIPFHSLELRLIDGE 1065 (1075)
Q Consensus 992 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls-~i~~~~~~l~l~~g~ 1065 (1075)
.||||||||+||||||+++|++||||||||+||..+...+.+.++. .+.|+|.|+|++. ...+.|+++.|.+|.
T Consensus 144 ~LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~ 222 (375)
T PRK09452 144 QLSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGR 222 (375)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999998887766543 4899999999997 467899999998775
No 376
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-35 Score=326.24 Aligned_cols=198 Identities=23% Similarity=0.306 Sum_probs=163.9
Q ss_pred CccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCC-----CCccEEEeCCcCc-------
Q 001446 179 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS------- 246 (1075)
Q Consensus 179 ~~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~------- 246 (1075)
...++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.+.
T Consensus 37 ~~~l~i~~l~~~~~-~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~ 115 (285)
T PRK14254 37 ETVIEARDLNVFYG-DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDP 115 (285)
T ss_pred CceEEEEEEEEEEC-CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccch
Confidence 45699999999996 4679999999999999999999999999999999999997 6899999998531
Q ss_pred -cccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChh----HHhcCCCCcccCCCCCCChhHH
Q 001446 247 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQ 321 (1075)
Q Consensus 247 -~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGqk 321 (1075)
.+++.++|+||++.++..|++||+.++...... .....+++.++++.+++.. ..++.+ .+||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~i~~~~~~~~--------~~LSgGe~ 186 (285)
T PRK14254 116 VALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGY-DGDIDERVEESLRRAALWDEVKDQLDSSG--------LDLSGGQQ 186 (285)
T ss_pred HhhhccEEEEecCCccCcCCHHHHHHHHHHHcCC-cHHHHHHHHHHHHHcCCCchhHHHHhCCc--------ccCCHHHH
Confidence 235679999999988878999999865321111 1112346778888888853 344443 68999999
Q ss_pred HHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CCeEEEEecChhhHh-hCCeEE-EEcC
Q 001446 322 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVA-FHDVVL-SLDG 386 (1075)
Q Consensus 322 qRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~vtH~~~~~~-~~d~i~-~l~~ 386 (1075)
||++|||||+.+|++|||||||++||+.+.+.+.+.+++. +.|+|++||+++.+. .+|+++ ++++
T Consensus 187 qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~ 255 (285)
T PRK14254 187 QRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTG 255 (285)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeC
Confidence 9999999999999999999999999999999998888653 579999999999875 699976 4564
No 377
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.9e-36 Score=320.89 Aligned_cols=195 Identities=27% Similarity=0.394 Sum_probs=165.7
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc----cccccEEEEcC
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVPQ 257 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~----~~~~~i~~v~Q 257 (1075)
|+++|+++.|++ ++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|+||
T Consensus 1 l~~~~l~~~~~~--~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~~~~~i~~~~q 78 (235)
T cd03299 1 LKVENLSKDWKE--FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPPEKRDISYVPQ 78 (235)
T ss_pred CeeEeEEEEeCC--ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCChhHcCEEEEee
Confidence 468999999863 389999999999999999999999999999999999999999999999641 12467999999
Q ss_pred CCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCE
Q 001446 258 RPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 336 (1075)
Q Consensus 258 ~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~i 336 (1075)
++.++. .|+.||+.++............+++.++++.+++.+..++.+ .+||||||||++||||++.+|++
T Consensus 79 ~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~laral~~~p~l 150 (235)
T cd03299 79 NYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKP--------ETLSGGEQQRVAIARALVVNPKI 150 (235)
T ss_pred cCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCc--------ccCCHHHHHHHHHHHHHHcCCCE
Confidence 998775 699999987532211111112345678899999998888876 68999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 337 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 337 llLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
++|||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .+|++++|++
T Consensus 151 lllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~ 205 (235)
T cd03299 151 LLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLN 205 (235)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 999999999999999999887764 2899999999999875 6999999986
No 378
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-36 Score=332.41 Aligned_cols=200 Identities=22% Similarity=0.233 Sum_probs=163.1
Q ss_pred eEEeeeeeeCCCc----cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc------cC
Q 001446 837 ISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE------AG 906 (1075)
Q Consensus 837 I~f~~V~~~yp~~----~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~------~~ 906 (1075)
|+++||+++|++. .++|+||||+|++||.+||+|+||||||||+++|.|+.+|++|+|.+||.++... ..
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 7899999999752 4699999999999999999999999999999999999999999999999988531 23
Q ss_pred CcCcEEEEcCCC--CCCCcchhhhhcCCCC---hHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCch-hhhhhhc
Q 001446 907 SGCGIFYVPQRP--YTCLGTLRDQIIYPLS---REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS-YLLEREE 980 (1075)
Q Consensus 907 ~r~~i~~VpQdP--~Lf~gTir~NL~~p~~---~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~-~~i~~~~ 980 (1075)
.|.+++||||+| .+|+.|+++||.++.. .+.. ...+.+.++++.++|. .+...
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~-------------------~~~~~~~~~l~~~gL~~~~~~~-- 141 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEE-------------------DAKQKAREMIELVGLPEELLAR-- 141 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHH-------------------HHHHHHHHHHHHCCCChhhhhC--
Confidence 456799999998 6888999999976311 0000 0112345667777774 22211
Q ss_pred cCCccccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCch-hhc
Q 001446 981 VGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFH 1055 (1075)
Q Consensus 981 ~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i-~~~ 1055 (1075)
....||||||||++|||||+.+|++|||||||++||+.+...+.+++++ .|.|||+|+|+++.+ ++.
T Consensus 142 --------~~~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~ 213 (290)
T PRK13634 142 --------SPFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYA 213 (290)
T ss_pred --------CcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhC
Confidence 1356999999999999999999999999999999999999887776643 389999999999865 789
Q ss_pred cceEEEEcCC
Q 001446 1056 SLELRLIDGE 1065 (1075)
Q Consensus 1056 ~~~l~l~~g~ 1065 (1075)
|+++.|.+|.
T Consensus 214 drv~~l~~G~ 223 (290)
T PRK13634 214 DQIVVMHKGT 223 (290)
T ss_pred CEEEEEECCE
Confidence 9999998775
No 379
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-35 Score=323.03 Aligned_cols=198 Identities=23% Similarity=0.257 Sum_probs=163.4
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCC--C---CccEEEeCCcCc--------
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP--L---VSGHIAKPGVGS-------- 246 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~--~---~~G~i~~~~~~~-------- 246 (1075)
+.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|.+.
T Consensus 3 ~~l~~~nl~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 81 (252)
T PRK14256 3 NKVKLEQLNVHFG-KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPV 81 (252)
T ss_pred cEEEEEEEEEEeC-CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChH
Confidence 4689999999996 4679999999999999999999999999999999999986 4 689999998541
Q ss_pred cccccEEEEcCCCCCCc-CCHHHHhcCCCCCCccc-CcCCHHHHHHHHHHcCChhH----HhcCCCCcccCCCCCCChhH
Q 001446 247 DLNKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGE 320 (1075)
Q Consensus 247 ~~~~~i~~v~Q~~~~~~-~tv~~ni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~g~~LSgGq 320 (1075)
.+++.++|+||++.++. .|++||+.++....... ....++++.++++.+++... .++. ..+|||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~~LS~G~ 153 (252)
T PRK14256 82 SIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDRLKSN--------AMELSGGQ 153 (252)
T ss_pred HhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCC--------cCcCCHHH
Confidence 23567999999998877 59999998653211110 11123456778888888542 2332 26899999
Q ss_pred HHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 321 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 321 kqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
|||++|||||+.+|+++||||||++||+.+.+.+.+.+++. ++|+|++||+++.+ ..||++++|++
T Consensus 154 ~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~ 222 (252)
T PRK14256 154 QQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYM 222 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEEC
Confidence 99999999999999999999999999999999998887653 68999999999987 57999999986
No 380
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-35 Score=323.16 Aligned_cols=197 Identities=22% Similarity=0.274 Sum_probs=162.7
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCC---CCC--CccEEEeCCcCc--------c
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGL---WPL--VSGHIAKPGVGS--------D 247 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~---~~~--~~G~i~~~~~~~--------~ 247 (1075)
.++++|+++.|++ +++|+|+||++++||+++|+||||||||||+++|+|+ .+| ++|+|.++|.+. .
T Consensus 3 ~l~~~~~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 81 (250)
T PRK14245 3 KIDARDVNFWYGD-FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDE 81 (250)
T ss_pred EEEEEEEEEEECC-EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHH
Confidence 6899999999964 6799999999999999999999999999999999997 454 589999998641 2
Q ss_pred ccccEEEEcCCCCCCcCCHHHHhcCCCCCCccc-CcCCHHHHHHHHHHcCChhH----HhcCCCCcccCCCCCCChhHHH
Q 001446 248 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQQ 322 (1075)
Q Consensus 248 ~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~g~~LSgGqkq 322 (1075)
.++.++|+||++.++..|++||+.++....... .....+++.++++.+++.+. .++.+ .+|||||||
T Consensus 82 ~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LS~G~~q 153 (250)
T PRK14245 82 LRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKESA--------FALSGGQQQ 153 (250)
T ss_pred HhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhhhhhCCc--------ccCCHHHHH
Confidence 345799999999888889999998753211100 11123456778888888542 33333 689999999
Q ss_pred HHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 323 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 323 Rl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
|++|||||+.+|+++||||||++||+.++..+.+.+++ .++|+|++||+++.+ ..||++++|++
T Consensus 154 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~ 220 (250)
T PRK14245 154 RLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYM 220 (250)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEEC
Confidence 99999999999999999999999999999999988865 378999999999987 56999999986
No 381
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.6e-36 Score=318.71 Aligned_cols=202 Identities=20% Similarity=0.195 Sum_probs=162.4
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc-cCCcCcEEEEc
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYVP 915 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~-~~~r~~i~~Vp 915 (1075)
|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.++|.++... ...+.+++|+|
T Consensus 1 i~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (220)
T cd03265 1 IEVENLVKKYGD-FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGIVF 79 (220)
T ss_pred CEEEEEEEEECC-EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEEec
Confidence 578999998865 5799999999999999999999999999999999999999999999999887643 22355799999
Q ss_pred CCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCC
Q 001446 916 QRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 994 (1075)
Q Consensus 916 QdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 994 (1075)
|+|.+|.+ |+++|+.++... .+.. ....++.+.++++.++|.+..... ...||
T Consensus 80 q~~~~~~~~tv~~~l~~~~~~----------~~~~------~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS 133 (220)
T cd03265 80 QDLSVDDELTGWENLYIHARL----------YGVP------GAERRERIDELLDFVGLLEAADRL----------VKTYS 133 (220)
T ss_pred CCccccccCcHHHHHHHHHHH----------cCCC------HHHHHHHHHHHHHHcCCHHHhhCC----------hhhCC
Confidence 99998875 999999753100 0000 000133456777888775443322 24699
Q ss_pred hhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 995 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 995 gGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
||||||++||||++.+|++|||||||++||.++...+.+.+++ .++|+|+|+|+++.+ .+.|+++.+.+|.
T Consensus 134 ~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~ 209 (220)
T cd03265 134 GGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGR 209 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999999999998887776543 388999999999865 5799999997664
No 382
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-36 Score=332.91 Aligned_cols=200 Identities=19% Similarity=0.208 Sum_probs=162.3
Q ss_pred eEEeeeeeeCCCc----cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcc---------
Q 001446 837 ISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDE--------- 903 (1075)
Q Consensus 837 I~f~~V~~~yp~~----~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~--------- 903 (1075)
|+++||++.|++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 7899999999753 369999999999999999999999999999999999999999999999876531
Q ss_pred -----------------ccCCcCcEEEEcCCC--CCCCcchhhhhcCCCC---hHHHHHHHhhhcCCCcccccccccchH
Q 001446 904 -----------------EAGSGCGIFYVPQRP--YTCLGTLRDQIIYPLS---REEAELRALKLHGKGEKLVDTTNILDS 961 (1075)
Q Consensus 904 -----------------~~~~r~~i~~VpQdP--~Lf~gTir~NL~~p~~---~~~~~~~a~~~~~~~~~~~~~~~~~d~ 961 (1075)
....|.+++||||+| .+|..|+++||.++.. ...+ ..++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~-------------------~~~~ 143 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKE-------------------EAKK 143 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHH-------------------HHHH
Confidence 112356799999987 6888899999986421 0000 0123
Q ss_pred HHHHHHHhCCch-hhhhhhccCCccccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---
Q 001446 962 YLKTILEGVRLS-YLLEREEVGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--- 1037 (1075)
Q Consensus 962 ~i~~~l~~~~L~-~~i~~~~~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--- 1037 (1075)
.+.++++.++|. +...+. ...||||||||++|||||+.+|++|||||||++||......+.+.+++
T Consensus 144 ~~~~~l~~~gL~~~~~~~~----------~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~ 213 (305)
T PRK13651 144 RAAKYIELVGLDESYLQRS----------PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK 213 (305)
T ss_pred HHHHHHHHcCCChhhhhCC----------hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH
Confidence 455677777774 232221 356999999999999999999999999999999999998887766543
Q ss_pred cCceEEEecCCCC-chhhccceEEEEcCC
Q 001446 1038 MGITFVTSSQRPA-LIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1038 ~~~TvI~IaHRls-~i~~~~~~l~l~~g~ 1065 (1075)
.|+|||+|+|+++ ..++.|+++.|.+|.
T Consensus 214 ~g~tiiivtHd~~~~~~~adrv~vl~~G~ 242 (305)
T PRK13651 214 QGKTIILVTHDLDNVLEWTKRTIFFKDGK 242 (305)
T ss_pred CCCEEEEEeeCHHHHHHhCCEEEEEECCE
Confidence 4899999999997 558999999998774
No 383
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=8e-36 Score=320.54 Aligned_cols=200 Identities=28% Similarity=0.353 Sum_probs=158.8
Q ss_pred eEEeeeeeeCCCc---cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc-----CCc
Q 001446 837 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSG 908 (1075)
Q Consensus 837 I~f~~V~~~yp~~---~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~-----~~r 908 (1075)
|+++||++.|++. .++|+|+||+|++||.+||+||||||||||+++|.|+++|.+|+|.++|.++...+ ..|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 6899999999754 37999999999999999999999999999999999999999999999999887643 345
Q ss_pred CcEEEEcCCC--CCC-CcchhhhhcCCCC-----hHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCch-hhhhhh
Q 001446 909 CGIFYVPQRP--YTC-LGTLRDQIIYPLS-----REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS-YLLERE 979 (1075)
Q Consensus 909 ~~i~~VpQdP--~Lf-~gTir~NL~~p~~-----~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~-~~i~~~ 979 (1075)
.+++|+||+| .++ ..|+++|+.++.. ..+... +....++++.+++. .....
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~-------------------~~~~~~~l~~~~l~~~~~~~- 141 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEAR-------------------KEAVLLLLVGVGLPEEVLNR- 141 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHH-------------------HHHHHHHHHHCCCChhHhhC-
Confidence 6799999999 344 5799999964210 000000 00012455666552 22211
Q ss_pred ccCCccccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---c-CceEEEecCCCCchh-h
Q 001446 980 EVGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---M-GITFVTSSQRPALIP-F 1054 (1075)
Q Consensus 980 ~~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~-~~TvI~IaHRls~i~-~ 1054 (1075)
....||||||||++||||++++|+||||||||++||.++...+.+.+++ . ++|+|+|+|+++.+. +
T Consensus 142 ---------~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~ 212 (228)
T cd03257 142 ---------YPHELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKI 212 (228)
T ss_pred ---------CchhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHh
Confidence 1356999999999999999999999999999999999999888776643 2 899999999998776 8
Q ss_pred ccceEEEEcCC
Q 001446 1055 HSLELRLIDGE 1065 (1075)
Q Consensus 1055 ~~~~l~l~~g~ 1065 (1075)
.|+++.|.+|.
T Consensus 213 ~d~i~~l~~G~ 223 (228)
T cd03257 213 ADRVAVMYAGK 223 (228)
T ss_pred cCeEEEEeCCE
Confidence 99999997653
No 384
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=1.1e-35 Score=318.22 Aligned_cols=196 Identities=24% Similarity=0.292 Sum_probs=159.9
Q ss_pred EEEEeEEEEcCC------CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCC--c--Cc-----
Q 001446 182 IEFSGVKVVTPT------GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPG--V--GS----- 246 (1075)
Q Consensus 182 i~~~~v~~~~~~------~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~--~--~~----- 246 (1075)
++++|+++.|+. +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| . +.
T Consensus 2 l~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~~ 81 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASP 81 (224)
T ss_pred EEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcCH
Confidence 789999999953 24799999999999999999999999999999999999999999999973 2 20
Q ss_pred ----cc-cccEEEEcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHH-hcCCCCcccCCCCCCChh
Q 001446 247 ----DL-NKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLL-DRYPPEKEINWGDELSLG 319 (1075)
Q Consensus 247 ----~~-~~~i~~v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~~~~~~g~~LSgG 319 (1075)
.. ++.++|+||+|.++. .|++||+.++............+++.++++.+++.+.. ++.+ .+||||
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--------~~LS~G 153 (224)
T TIGR02324 82 REVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAARARARELLARLNIPERLWHLPP--------ATFSGG 153 (224)
T ss_pred HHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhhCCc--------ccCCHH
Confidence 01 346999999997765 59999997643211111111234567788999987643 4433 689999
Q ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEc
Q 001446 320 EQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLD 385 (1075)
Q Consensus 320 qkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~ 385 (1075)
||||++|||||+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+.+.+. .||+++.+.
T Consensus 154 ~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~~ 223 (224)
T TIGR02324 154 EQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDVT 223 (224)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEecC
Confidence 99999999999999999999999999999999999888764 4889999999999885 799998763
No 385
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=336.23 Aligned_cols=187 Identities=24% Similarity=0.327 Sum_probs=162.6
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc----------ccccc
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------DLNKE 251 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~----------~~~~~ 251 (1075)
|++ |+++.|.+ + .+ |+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..+++
T Consensus 2 l~~-~l~k~~~~-~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~~ 77 (352)
T PRK11144 2 LEL-NFKQQLGD-L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKRR 77 (352)
T ss_pred eEE-EEEEEeCC-E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhCC
Confidence 667 89998853 3 33 89999999999999999999999999999999999999999998531 13567
Q ss_pred EEEEcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHH
Q 001446 252 IFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 330 (1075)
Q Consensus 252 i~~v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral 330 (1075)
++|+||++.+++ .|++||+.++... ...+++.++++.+++.+..++.| .+||||||||++|||||
T Consensus 78 i~~v~q~~~l~~~~tv~enl~~~~~~------~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgGq~qRvalaraL 143 (352)
T PRK11144 78 IGYVFQDARLFPHYKVRGNLRYGMAK------SMVAQFDKIVALLGIEPLLDRYP--------GSLSGGEKQRVAIGRAL 143 (352)
T ss_pred EEEEcCCcccCCCCcHHHHHHhhhhh------hhHHHHHHHHHHcCCchhhhCCc--------ccCCHHHHHHHHHHHHH
Confidence 999999998876 5999999986431 23456788999999998888877 68999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 331 YHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 331 ~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
+.+|+++||||||++||+.+++.+.+.+++ .|+|+|+||||++.+ ..||++++|++
T Consensus 144 ~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~ 204 (352)
T PRK11144 144 LTAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQ 204 (352)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeC
Confidence 999999999999999999999998887753 378999999999876 56999999986
No 386
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-36 Score=341.11 Aligned_cols=204 Identities=19% Similarity=0.259 Sum_probs=168.5
Q ss_pred CceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEE
Q 001446 835 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYV 914 (1075)
Q Consensus 835 g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~V 914 (1075)
..|+++||+++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++......+.+++||
T Consensus 18 ~~l~l~~v~~~~~~-~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig~v 96 (377)
T PRK11607 18 PLLEIRNLTKSFDG-QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPINMM 96 (377)
T ss_pred ceEEEEeEEEEECC-EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEEE
Confidence 35999999999864 57999999999999999999999999999999999999999999999999988765556679999
Q ss_pred cCCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCC
Q 001446 915 PQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDIL 993 (1075)
Q Consensus 915 pQdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~L 993 (1075)
+|+|.||+. |+++||.|+...... ......+.+.++++.++|.++.++. ...|
T Consensus 97 fQ~~~lfp~ltv~eNi~~~l~~~~~----------------~~~~~~~~v~~~l~~l~L~~~~~~~----------~~~L 150 (377)
T PRK11607 97 FQSYALFPHMTVEQNIAFGLKQDKL----------------PKAEIASRVNEMLGLVHMQEFAKRK----------PHQL 150 (377)
T ss_pred eCCCccCCCCCHHHHHHHHHHHcCC----------------CHHHHHHHHHHHHHHcCCchhhcCC----------hhhC
Confidence 999999975 999999986421000 0000123456777888876554443 2469
Q ss_pred ChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHH----HhcCceEEEecCCCC-chhhccceEEEEcCC
Q 001446 994 SLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLA----KDMGITFVTSSQRPA-LIPFHSLELRLIDGE 1065 (1075)
Q Consensus 994 SgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~----~~~~~TvI~IaHRls-~i~~~~~~l~l~~g~ 1065 (1075)
|||||||+||||||+++|++|+||||||+||..+...+.+.+ ++.+.|+|.|+|+++ ...+.|+++.|.+|.
T Consensus 151 SgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~ 227 (377)
T PRK11607 151 SGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGK 227 (377)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999987765433 345899999999997 468999999997664
No 387
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-35 Score=325.84 Aligned_cols=199 Identities=21% Similarity=0.217 Sum_probs=162.2
Q ss_pred CccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCC-----CCccEEEeCCcCc-------
Q 001446 179 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS------- 246 (1075)
Q Consensus 179 ~~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~------- 246 (1075)
...++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.+.
T Consensus 22 ~~~l~~~~l~~~~~-~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 22 KVVFDTQNLNLWYG-EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred ceEEEEeeeEEEEC-CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 34799999999996 4579999999999999999999999999999999999987 6999999998531
Q ss_pred -cccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccC-cCCHHHHHHHHHHcCCh----hHHhcCCCCcccCCCCCCChhH
Q 001446 247 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVE-PLTHGGMVELLKNVDLE----YLLDRYPPEKEINWGDELSLGE 320 (1075)
Q Consensus 247 -~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~-~~~~~~~~~~l~~~~l~----~~~~~~~~~~~~~~g~~LSgGq 320 (1075)
.+++.++|+||+|.++..|++||+.++........ ......+.++++.+++. +..++.+ .+|||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~--------~~LSgGe 172 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELKDRLHDNA--------YGLSGGQ 172 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHHHHHhcCc--------ccCCHHH
Confidence 23567999999999888899999987532111100 01123345666666542 3333333 6899999
Q ss_pred HHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 321 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 321 kqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|||++|||||+.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+. .||++++|++
T Consensus 173 ~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~ 241 (271)
T PRK14238 173 QQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLN 241 (271)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999888765 3789999999999875 6999999986
No 388
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-36 Score=327.84 Aligned_cols=203 Identities=19% Similarity=0.183 Sum_probs=165.7
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc---CCcCcEEE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIFY 913 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~---~~r~~i~~ 913 (1075)
|+++||++.|++.+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.++|.++...+ .++.+++|
T Consensus 2 l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 81 (274)
T PRK13644 2 IRLENVSYSYPDGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVGI 81 (274)
T ss_pred EEEEEEEEEcCCCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheEE
Confidence 689999999976567999999999999999999999999999999999999999999999999887542 34567999
Q ss_pred EcCCCC--CCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccccccc
Q 001446 914 VPQRPY--TCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 991 (1075)
Q Consensus 914 VpQdP~--Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~ 991 (1075)
|||+|. ++..|+++||.++.... +. .....++.+.++++.++|.+..... ..
T Consensus 82 v~q~~~~~~~~~tv~enl~~~~~~~----------~~------~~~~~~~~~~~~l~~~gl~~~~~~~----------~~ 135 (274)
T PRK13644 82 VFQNPETQFVGRTVEEDLAFGPENL----------CL------PPIEIRKRVDRALAEIGLEKYRHRS----------PK 135 (274)
T ss_pred EEEChhhhcccchHHHHHHhhHHHc----------CC------CHHHHHHHHHHHHHHCCCHHHhcCC----------cc
Confidence 999985 56789999997642100 00 0000123455667777775443322 34
Q ss_pred CCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 992 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 992 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
.||+|||||++|||||+++|+||||||||++||+.+...+.+.+++ .|+|+|+++|+++.+...|+++.+.+|.
T Consensus 136 ~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~ 212 (274)
T PRK13644 136 TLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGK 212 (274)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCE
Confidence 6999999999999999999999999999999999998887776643 4899999999999889999999997765
No 389
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=9.7e-36 Score=319.44 Aligned_cols=203 Identities=22% Similarity=0.251 Sum_probs=164.8
Q ss_pred ceEEeeeeeeCCCc---cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccC------
Q 001446 836 SISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAG------ 906 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~---~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~------ 906 (1075)
.|+++||++.|++. .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++...+.
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 58999999999753 369999999999999999999999999999999999999999999999998876421
Q ss_pred CcCcEEEEcCCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcc
Q 001446 907 SGCGIFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 985 (1075)
Q Consensus 907 ~r~~i~~VpQdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt 985 (1075)
.+.+++|+||+|.+|.+ |+++|+.++..... . ......+.+.++++.+++.+.....
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~----------~------~~~~~~~~~~~~l~~~~l~~~~~~~------ 143 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRG----------E------SSRQSRNGAKALLEQLGLGKRLDHL------ 143 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcC----------C------CHHHHHHHHHHHHHHcCCHhHhhCC------
Confidence 23569999999999885 99999975311000 0 0001123456677777775544332
Q ss_pred ccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCchhhccceEEE
Q 001446 986 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRL 1061 (1075)
Q Consensus 986 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i~~~~~~l~l 1061 (1075)
...||||||||++|||||+++|++|||||||++||.++...+.+.+++ .+.|||+|+|+++.+...|+++.+
T Consensus 144 ----~~~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l 219 (228)
T PRK10584 144 ----PAQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRL 219 (228)
T ss_pred ----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEE
Confidence 246999999999999999999999999999999999998887776632 378999999999988889999999
Q ss_pred EcC
Q 001446 1062 IDG 1064 (1075)
Q Consensus 1062 ~~g 1064 (1075)
.+|
T Consensus 220 ~~g 222 (228)
T PRK10584 220 VNG 222 (228)
T ss_pred ECC
Confidence 765
No 390
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-35 Score=321.89 Aligned_cols=198 Identities=23% Similarity=0.249 Sum_probs=163.3
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCC-----ccEEEeCCcCc--------c
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV-----SGHIAKPGVGS--------D 247 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~-----~G~i~~~~~~~--------~ 247 (1075)
.++++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.+. .
T Consensus 4 ~l~~~~l~~~~~-~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~ 82 (251)
T PRK14249 4 KIKIRGVNFFYH-KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVN 82 (251)
T ss_pred eEEEEEEEEEEC-CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHH
Confidence 589999999996 467999999999999999999999999999999999999987 69999998541 2
Q ss_pred ccccEEEEcCCCCCCcCCHHHHhcCCCCCCccc-CcCCHHHHHHHHHHcCChhH----HhcCCCCcccCCCCCCChhHHH
Q 001446 248 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQQ 322 (1075)
Q Consensus 248 ~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~g~~LSgGqkq 322 (1075)
+++.++|+||+|.++..|++||+.++....... ....++.+.++++.+++.+. .++. ..+|||||||
T Consensus 83 ~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--------~~~LS~Gq~q 154 (251)
T PRK14249 83 LRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKDNLHKS--------GLALSGGQQQ 154 (251)
T ss_pred hhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhhHhhCC--------cccCCHHHHH
Confidence 356799999999988889999998764221110 11122445667777777532 3333 3689999999
Q ss_pred HHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHh-hCCeEEEEcCC
Q 001446 323 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDGE 387 (1075)
Q Consensus 323 Rl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~~ 387 (1075)
|++|||||+.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+. .||++++|+++
T Consensus 155 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G 222 (251)
T PRK14249 155 RLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTG 222 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCC
Confidence 99999999999999999999999999999998887764 3789999999999875 58999999863
No 391
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-35 Score=322.57 Aligned_cols=197 Identities=21% Similarity=0.246 Sum_probs=162.7
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCC-----CccEEEeCCcCc--------c
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS--------D 247 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~--------~ 247 (1075)
.++++||++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+. .
T Consensus 3 ~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 81 (250)
T PRK14240 3 KISVKDLDLFYG-DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQ 81 (250)
T ss_pred eEEEEEEEEEEC-CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHH
Confidence 589999999996 45799999999999999999999999999999999999763 699999998641 2
Q ss_pred ccccEEEEcCCCCCCcCCHHHHhcCCCCCCccc-CcCCHHHHHHHHHHcCChh----HHhcCCCCcccCCCCCCChhHHH
Q 001446 248 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQQ 322 (1075)
Q Consensus 248 ~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGqkq 322 (1075)
+++.++|+||++.++..|+++|+.++....... ....++++.++++.+++.+ ..++.+ .+|||||||
T Consensus 82 ~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~--------~~LS~G~~q 153 (250)
T PRK14240 82 LRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKDRLKKSA--------LGLSGGQQQ 153 (250)
T ss_pred HhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHHHHhcCC--------CCCCHHHHH
Confidence 356799999999888899999998753211110 1112345667788888753 233333 689999999
Q ss_pred HHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 323 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 323 Rl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
|++|||||+.+|+++||||||++||+.++..+.+.+++ .++|+|++||+++.+ ..+|+++++++
T Consensus 154 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~ 220 (250)
T PRK14240 154 RLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLN 220 (250)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEEC
Confidence 99999999999999999999999999999999888764 378999999999976 46999999986
No 392
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-35 Score=323.86 Aligned_cols=197 Identities=23% Similarity=0.277 Sum_probs=162.3
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCC-----CccEEEeCCcCc--------c
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS--------D 247 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~--------~ 247 (1075)
.++++|+++.|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+. .
T Consensus 4 ~l~i~~v~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~ 82 (258)
T PRK14241 4 RIDVKDLNIYYGS-FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVA 82 (258)
T ss_pred cEEEeeEEEEECC-EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHH
Confidence 5899999999964 5799999999999999999999999999999999999974 799999998541 2
Q ss_pred ccccEEEEcCCCCCCc-CCHHHHhcCCCCCCcc-cCcCCHHHHHHHHHHcCCh----hHHhcCCCCcccCCCCCCChhHH
Q 001446 248 LNKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLE----YLLDRYPPEKEINWGDELSLGEQ 321 (1075)
Q Consensus 248 ~~~~i~~v~Q~~~~~~-~tv~~ni~~~~~~~~~-~~~~~~~~~~~~l~~~~l~----~~~~~~~~~~~~~~g~~LSgGqk 321 (1075)
+++.++|++|++.++. .|++||+.++...... .....++.+.++++.+++. +..++.+ .+||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LS~G~~ 154 (258)
T PRK14241 83 VRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKDRLDKPG--------GGLSGGQQ 154 (258)
T ss_pred HhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhHhhCCc--------ccCCHHHH
Confidence 3467999999998776 5999999865321111 0111234567788888884 2334433 68999999
Q ss_pred HHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 322 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 322 qRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
||++|||||+.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+ ..||+++++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~ 222 (258)
T PRK14241 155 QRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNL 222 (258)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEec
Confidence 999999999999999999999999999999999888764 368999999999987 57999999973
No 393
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=7.5e-36 Score=325.09 Aligned_cols=203 Identities=21% Similarity=0.259 Sum_probs=164.5
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc-----------
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA----------- 905 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~----------- 905 (1075)
|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+
T Consensus 1 i~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ 79 (252)
T TIGR03005 1 VRFSDVTKRFGI-LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPADE 79 (252)
T ss_pred CEEEEEEEEeCC-eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccch
Confidence 579999999975 57999999999999999999999999999999999999999999999999886432
Q ss_pred ----CCcCcEEEEcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhc
Q 001446 906 ----GSGCGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREE 980 (1075)
Q Consensus 906 ----~~r~~i~~VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~ 980 (1075)
..|.++++|||+|.+|. .|+++|+.++.... .+. .....++.+.++++.+++.+.....
T Consensus 80 ~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~---------~~~------~~~~~~~~~~~~l~~~gl~~~~~~~- 143 (252)
T TIGR03005 80 KHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV---------LGM------ARAEAEKRAMELLDMVGLADKADHM- 143 (252)
T ss_pred hHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh---------cCC------CHHHHHHHHHHHHHHcCChhHhhcC-
Confidence 23567999999999885 79999997531000 000 0001134456777877775544332
Q ss_pred cCCccccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCch-hhc
Q 001446 981 VGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFH 1055 (1075)
Q Consensus 981 ~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i-~~~ 1055 (1075)
...||||||||++||||++++|+++||||||++||..+...+.+.+++ .++|+|+|+|++..+ ++.
T Consensus 144 ---------~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~ 214 (252)
T TIGR03005 144 ---------PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFA 214 (252)
T ss_pred ---------hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhc
Confidence 356999999999999999999999999999999999998887776643 389999999999876 689
Q ss_pred cceEEEEcCC
Q 001446 1056 SLELRLIDGE 1065 (1075)
Q Consensus 1056 ~~~l~l~~g~ 1065 (1075)
|+++.|.+|.
T Consensus 215 d~i~~l~~G~ 224 (252)
T TIGR03005 215 DRVCFFDKGR 224 (252)
T ss_pred CEEEEEECCE
Confidence 9999998765
No 394
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-35 Score=302.29 Aligned_cols=160 Identities=31% Similarity=0.469 Sum_probs=144.1
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----ccccccEEEEc
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYVP 256 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v~ 256 (1075)
++++|+++.|++ +++|+++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|+|
T Consensus 1 l~~~~l~~~~~~-~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (173)
T cd03230 1 IEVRNLSKRYGK-KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEPEEVKRRIGYLP 79 (173)
T ss_pred CEEEEEEEEECC-eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccchHhhhccEEEEe
Confidence 468999999864 579999999999999999999999999999999999999999999999864 13456899999
Q ss_pred CCCCCCcC-CHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCC
Q 001446 257 QRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 335 (1075)
Q Consensus 257 Q~~~~~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~ 335 (1075)
|+|.++.. |++||+. ||||||||++|||||+.+|+
T Consensus 80 q~~~~~~~~tv~~~~~--------------------------------------------LS~G~~qrv~laral~~~p~ 115 (173)
T cd03230 80 EEPSLYENLTVRENLK--------------------------------------------LSGGMKQRLALAQALLHDPE 115 (173)
T ss_pred cCCccccCCcHHHHhh--------------------------------------------cCHHHHHHHHHHHHHHcCCC
Confidence 99987765 8888863 89999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 336 FAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 336 illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
++||||||++||+.+...+.+.+++ .|.|+|++||+.+.+. .+|++++|++
T Consensus 116 illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~ 170 (173)
T cd03230 116 LLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNN 170 (173)
T ss_pred EEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeC
Confidence 9999999999999999999888764 3789999999999876 7999999975
No 395
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.5e-36 Score=327.95 Aligned_cols=204 Identities=23% Similarity=0.323 Sum_probs=167.1
Q ss_pred ceEEeeeeeeCCC-ccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEE
Q 001446 836 SISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIF 912 (1075)
Q Consensus 836 ~I~f~~V~~~yp~-~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~ 912 (1075)
-|+++||++.|++ .+++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++...+ ..+.+|+
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 4899999999975 467999999999999999999999999999999999999999999999999987652 2456799
Q ss_pred EEcCCC--CCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccc
Q 001446 913 YVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 990 (1075)
Q Consensus 913 ~VpQdP--~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 990 (1075)
|+||+| .++..|+++||.++.... +. .....++.+.++++.++|.+..... .
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~----------~~------~~~~~~~~~~~~l~~~gL~~~~~~~----------~ 138 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENI----------GV------PREEMVERVDQALRQVGMEDFLNRE----------P 138 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhC----------CC------CHHHHHHHHHHHHHHcCChhhhhCC----------c
Confidence 999999 567789999998642100 00 0000123456677777776554433 2
Q ss_pred cCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 991 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 991 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
..||||||||++|||||+++|+||||||||++||..+...+.+.+++ .++|+|+|+|++..+...|+++.|.+|.
T Consensus 139 ~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~ 217 (279)
T PRK13635 139 HRLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGE 217 (279)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCE
Confidence 46999999999999999999999999999999999999888777643 3899999999999888899999997664
No 396
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=7.4e-36 Score=339.50 Aligned_cols=207 Identities=19% Similarity=0.257 Sum_probs=169.2
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEEE
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFY 913 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~~ 913 (1075)
-|+++||++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++...+ .++++|++
T Consensus 3 ~L~~~nls~~y~~-~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig~ 81 (402)
T PRK09536 3 MIDVSDLSVEFGD-TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVAS 81 (402)
T ss_pred eEEEeeEEEEECC-EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceEE
Confidence 3889999999974 67999999999999999999999999999999999999999999999999988753 34667999
Q ss_pred EcCCCCC-CCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccC
Q 001446 914 VPQRPYT-CLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 992 (1075)
Q Consensus 914 VpQdP~L-f~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~ 992 (1075)
|||+|.+ |+.|+++|+.++...... .........++.+.++++.+++.++.++. ...
T Consensus 82 v~q~~~l~~~~tv~e~v~~~~~~~~~------------~~~~~~~~~~~~v~~~le~vgl~~~~~~~----------~~~ 139 (402)
T PRK09536 82 VPQDTSLSFEFDVRQVVEMGRTPHRS------------RFDTWTETDRAAVERAMERTGVAQFADRP----------VTS 139 (402)
T ss_pred EccCCCCCCCCCHHHHHHhccchhcc------------cccCCCHHHHHHHHHHHHHcCCchhhcCC----------hhh
Confidence 9999987 678999999864311000 00000111234567788888886654332 346
Q ss_pred CChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 993 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 993 LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
||||||||++|||||+++|+||||||||++||..+...+.+++++ .+.|+|+++|+++.+ ++.|+++.|.+|.
T Consensus 140 LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~ 216 (402)
T PRK09536 140 LSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGR 216 (402)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999998887776543 488999999999877 7899999997765
No 397
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=6.3e-36 Score=305.64 Aligned_cols=165 Identities=31% Similarity=0.481 Sum_probs=149.1
Q ss_pred eEEeeeeeeCCCc-cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEEE
Q 001446 837 ISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFY 913 (1075)
Q Consensus 837 I~f~~V~~~yp~~-~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~~ 913 (1075)
|+++|++++|++. .++++|+||+|++||.++|+|++|||||||+++|.|+++|.+|+|.+||.++...+ ..|.+++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 5789999999853 57999999999999999999999999999999999999999999999999887652 34567999
Q ss_pred EcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCC
Q 001446 914 VPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDIL 993 (1075)
Q Consensus 914 VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~L 993 (1075)
++|+|.+|++|+++|+ |
T Consensus 81 ~~q~~~~~~~tv~~~l---------------------------------------------------------------L 97 (173)
T cd03246 81 LPQDDELFSGSIAENI---------------------------------------------------------------L 97 (173)
T ss_pred ECCCCccccCcHHHHC---------------------------------------------------------------c
Confidence 9999999988888876 3
Q ss_pred ChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCchhhccceEEEEcC
Q 001446 994 SLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIPFHSLELRLIDG 1064 (1075)
Q Consensus 994 SgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i~~~~~~l~l~~g 1064 (1075)
|||||||++||||++++|++|||||||++||..+...+.+.++. .++|+|+|+|++..+.+.|+++.+.+|
T Consensus 98 S~G~~qrv~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G 171 (173)
T cd03246 98 SGGQRQRLGLARALYGNPRILVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDG 171 (173)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECC
Confidence 99999999999999999999999999999999999888776643 488999999999988999999999765
No 398
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=6.9e-35 Score=318.77 Aligned_cols=193 Identities=25% Similarity=0.391 Sum_probs=163.9
Q ss_pred CCccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCccccccEEEEcC
Q 001446 178 EANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQ 257 (1075)
Q Consensus 178 ~~~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~~~~~~i~~v~Q 257 (1075)
..+.|+++|+++. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++|++|
T Consensus 36 ~~~~l~i~nls~~---~~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-------~i~yv~q 105 (282)
T cd03291 36 DDNNLFFSNLCLV---GAPVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-------RISFSSQ 105 (282)
T ss_pred CCCeEEEEEEEEe---cccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------EEEEEeC
Confidence 3457999999985 35799999999999999999999999999999999999999999999987 5999999
Q ss_pred CCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCccc---CCCCCCChhHHHHHHHHHHHcCCC
Q 001446 258 RPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKP 334 (1075)
Q Consensus 258 ~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~g~~LSgGqkqRl~lAral~~~p 334 (1075)
+++++..|++||+.++... ...++.+.++.+++.+.++..+..... ..+.+||||||||++|||||+.+|
T Consensus 106 ~~~l~~~tv~enl~~~~~~-------~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p 178 (282)
T cd03291 106 FSWIMPGTIKENIIFGVSY-------DEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDA 178 (282)
T ss_pred cccccccCHHHHhhccccc-------CHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 9999889999999875321 122445667778888777766543211 234689999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHH-H--hcCCeEEEEecChhhHhhCCeEEEEcCC
Q 001446 335 KFAILDECTSAVTTDMEERFCAKV-R--AMGTSCITISHRPALVAFHDVVLSLDGE 387 (1075)
Q Consensus 335 ~illLDEpts~LD~~~~~~i~~~l-~--~~~~t~i~vtH~~~~~~~~d~i~~l~~~ 387 (1075)
+++||||||++||+.+...+.+.+ + ..+.|+|++||+++.+..||++++|+++
T Consensus 179 ~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G 234 (282)
T cd03291 179 DLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEG 234 (282)
T ss_pred CEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECC
Confidence 999999999999999999887643 2 2478999999999999899999999863
No 399
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=8.1e-36 Score=323.81 Aligned_cols=207 Identities=23% Similarity=0.252 Sum_probs=163.9
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCC-----CCeEecCCCCCccc----cCC
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVV-----SGSLTKPSQHIDEE----AGS 907 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~-----sG~I~idg~di~~~----~~~ 907 (1075)
|+++||++.|++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|. +|+|.+||.++... ...
T Consensus 2 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~ 80 (247)
T TIGR00972 2 IEIENLNLFYGE-KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVEL 80 (247)
T ss_pred EEEEEEEEEECC-eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHH
Confidence 789999999975 46999999999999999999999999999999999999988 99999999988652 234
Q ss_pred cCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc
Q 001446 908 GCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 987 (1075)
Q Consensus 908 r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 987 (1075)
+.+++||||+|.+|+.|+++|+.++.... +. . .....++.+.++++.+++...+.. -++.
T Consensus 81 ~~~i~~v~q~~~~~~~tv~e~l~~~~~~~----------~~---~--~~~~~~~~~~~~l~~~~l~~~~~~---~~~~-- 140 (247)
T TIGR00972 81 RRRVGMVFQKPNPFPMSIYDNIAYGPRLH----------GI---K--DKKELDEIVEESLKKAALWDEVKD---RLHD-- 140 (247)
T ss_pred HhheEEEecCcccCCCCHHHHHHhHHHhc----------CC---C--CHHHHHHHHHHHHHHcCCCcchhh---HhhC--
Confidence 56799999999999999999997532100 00 0 000112345667777777522100 0111
Q ss_pred ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCc-hhhccceEEEEcC
Q 001446 988 NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPAL-IPFHSLELRLIDG 1064 (1075)
Q Consensus 988 ~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~-i~~~~~~l~l~~g 1064 (1075)
....||||||||++|||||+++|+++||||||++||..+...+.+.+++ .++|+|+|+|+++. .++.|+++.|.+|
T Consensus 141 -~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G 219 (247)
T TIGR00972 141 -SALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDG 219 (247)
T ss_pred -CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECC
Confidence 1356999999999999999999999999999999999999888777654 35899999999985 4789999999876
Q ss_pred C
Q 001446 1065 E 1065 (1075)
Q Consensus 1065 ~ 1065 (1075)
.
T Consensus 220 ~ 220 (247)
T TIGR00972 220 E 220 (247)
T ss_pred E
Confidence 5
No 400
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-35 Score=332.67 Aligned_cols=198 Identities=19% Similarity=0.284 Sum_probs=162.5
Q ss_pred cEEEEeEEEEcCC---CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCC----CCccEEEeCCcCc------c
Q 001446 181 YIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP----LVSGHIAKPGVGS------D 247 (1075)
Q Consensus 181 ~i~~~~v~~~~~~---~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~----~~~G~i~~~~~~~------~ 247 (1075)
.|+++|+++.|+. ...+|+|+||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.++|.+. .
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 5899999999953 3469999999999999999999999999999999999986 5899999999641 1
Q ss_pred ----ccccEEEEcCCCCC---CcCCHHHHhcCCCCC---Ccc---cCcCCHHHHHHHHHHcCChh---HHhcCCCCcccC
Q 001446 248 ----LNKEIFYVPQRPYT---AVGTLRDQLIYPLTS---DQE---VEPLTHGGMVELLKNVDLEY---LLDRYPPEKEIN 311 (1075)
Q Consensus 248 ----~~~~i~~v~Q~~~~---~~~tv~~ni~~~~~~---~~~---~~~~~~~~~~~~l~~~~l~~---~~~~~~~~~~~~ 311 (1075)
.++.|+||||+|.. +..|+.+|+..+... ... ......+++.++++.++|.+ ..+++|
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~p------ 156 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFP------ 156 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhCCc------
Confidence 12479999999963 335899998653210 000 00112356788999999974 356666
Q ss_pred CCCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 312 WGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 312 ~g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
.+|||||||||+|||||+.+|++|||||||++||+.+...+.+.+++ .|.|+|+||||++.+. .||+|++|++
T Consensus 157 --~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~ 234 (330)
T PRK15093 157 --YELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYC 234 (330)
T ss_pred --hhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 68999999999999999999999999999999999999999887764 3899999999999985 6999999986
No 401
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=6.6e-36 Score=318.53 Aligned_cols=203 Identities=26% Similarity=0.344 Sum_probs=165.4
Q ss_pred eEEeeeeeeCCCc---cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc-----CCc
Q 001446 837 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSG 908 (1075)
Q Consensus 837 I~f~~V~~~yp~~---~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~-----~~r 908 (1075)
++++||++.|++. +++|+|+||++++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 7899999998742 67999999999999999999999999999999999999999999999999887543 235
Q ss_pred CcEEEEcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc
Q 001446 909 CGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 987 (1075)
Q Consensus 909 ~~i~~VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 987 (1075)
..++|+||+|.+|. .|+.+|+.++....+. . .....+..+.++++.+++.+.....
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~-~--------------~~~~~~~~~~~~l~~~~l~~~~~~~-------- 138 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPN-L--------------SYQEARERARAMLEAVGLGDHLDYY-------- 138 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccC-C--------------CHHHHHHHHHHHHHHcCChhhhhcC--------
Confidence 67999999999997 6999999753110000 0 0000123455677777775544333
Q ss_pred ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCchhhccceEEEEc
Q 001446 988 NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRLID 1063 (1075)
Q Consensus 988 ~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i~~~~~~l~l~~ 1063 (1075)
...||+|||||++||||++++|++|||||||++||.++...+.+.+++ .++|+|+|+|+++..++.|+++.|.+
T Consensus 139 --~~~lS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~ 216 (220)
T TIGR02982 139 --PHNLSGGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMED 216 (220)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEEC
Confidence 246999999999999999999999999999999999998877766543 48999999999999999999999976
Q ss_pred C
Q 001446 1064 G 1064 (1075)
Q Consensus 1064 g 1064 (1075)
|
T Consensus 217 g 217 (220)
T TIGR02982 217 G 217 (220)
T ss_pred C
Confidence 5
No 402
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=4.6e-36 Score=308.34 Aligned_cols=169 Identities=27% Similarity=0.357 Sum_probs=150.9
Q ss_pred eEEeeeeeeCCCc-cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc-cCCcCcEEEE
Q 001446 837 ISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYV 914 (1075)
Q Consensus 837 I~f~~V~~~yp~~-~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~-~~~r~~i~~V 914 (1075)
|+++|+++.|++. +++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.+||.++... ...|.+++|+
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~ 80 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLISVL 80 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEEEE
Confidence 5799999999764 4799999999999999999999999999999999999999999999999987654 2245679999
Q ss_pred cCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCC
Q 001446 915 PQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 994 (1075)
Q Consensus 915 pQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 994 (1075)
||+|.+|+.|+++|+ + ..||
T Consensus 81 ~q~~~~~~~tv~~~i--~----------------------------------------------------------~~LS 100 (178)
T cd03247 81 NQRPYLFDTTLRNNL--G----------------------------------------------------------RRFS 100 (178)
T ss_pred ccCCeeecccHHHhh--c----------------------------------------------------------ccCC
Confidence 999999999999987 1 1379
Q ss_pred hhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 995 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 995 gGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
+|||||++||||++++|++|||||||++||.++.+.+.+.+++ .++|+|+++|+++.+...|+++.+.+|.
T Consensus 101 ~G~~qrv~laral~~~p~~lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 173 (178)
T cd03247 101 GGERQRLALARILLQDAPIVLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGK 173 (178)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999888777654 4899999999999899999999996553
No 403
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-35 Score=314.95 Aligned_cols=189 Identities=25% Similarity=0.349 Sum_probs=159.6
Q ss_pred EEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc----------cccccE
Q 001446 183 EFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------DLNKEI 252 (1075)
Q Consensus 183 ~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~----------~~~~~i 252 (1075)
++ ||+++|++ +.+ |+||++++ |+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.+
T Consensus 3 ~~-~l~~~~~~-~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 77 (214)
T cd03297 3 CV-DIEKRLPD-FTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRKI 77 (214)
T ss_pred ee-eeeEecCC-eee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhcE
Confidence 44 89999964 344 99999999 99999999999999999999999999999999998531 134579
Q ss_pred EEEcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHc
Q 001446 253 FYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 253 ~~v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~ 331 (1075)
+|+||++.++. .|+++|+.++.... ......+++.++++.+++.+..++.+ .+||||||||++||||++
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la~al~ 147 (214)
T cd03297 78 GLVFQQYALFPHLNVRENLAFGLKRK--RNREDRISVDELLDLLGLDHLLNRYP--------AQLSGGEKQRVALARALA 147 (214)
T ss_pred EEEecCCccCCCCCHHHHHHHHHhhC--CHHHHHHHHHHHHHHcCCHhHhhcCc--------ccCCHHHHHHHHHHHHHh
Confidence 99999998875 59999998753211 01112346778999999988777765 689999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+.+.+ ..||++++|++
T Consensus 148 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 207 (214)
T cd03297 148 AQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMED 207 (214)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEEC
Confidence 99999999999999999999999887754 378999999999987 47999999986
No 404
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1e-35 Score=322.40 Aligned_cols=210 Identities=20% Similarity=0.264 Sum_probs=165.9
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc---CCcCcEEE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIFY 913 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~---~~r~~i~~ 913 (1075)
|+++|+++.|++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|.+|+|.+||.++...+ ..+.+++|
T Consensus 3 i~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 81 (242)
T TIGR03411 3 LYLEGLSVSFDG-FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIGR 81 (242)
T ss_pred EEEEeeEEEcCC-eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCeeE
Confidence 789999999975 57999999999999999999999999999999999999999999999999887652 23456999
Q ss_pred EcCCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccC
Q 001446 914 VPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 992 (1075)
Q Consensus 914 VpQdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~ 992 (1075)
+||+|.+|.+ |+++|+.++..........+ .+ ......++.+.++++.+++.+.... ....
T Consensus 82 ~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~l~~~~l~~~~~~----------~~~~ 143 (242)
T TIGR03411 82 KFQKPTVFENLTVFENLELALPRDKSVFASL--FF------RLSAEEKDRIEEVLETIGLADEADR----------LAGL 143 (242)
T ss_pred eccccccCCCCCHHHHHHHhhhccccccccc--cc------ccHHHHHHHHHHHHHHcCCchhhcC----------Chhh
Confidence 9999999987 99999986421100000000 00 0000123456677777776433221 1356
Q ss_pred CChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 993 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 993 LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
||||||||++||||++++|++|||||||++||.++...+.+.+++ .++|+|+|+|+++.+ ++.|+++.+.+|.
T Consensus 144 LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~ 219 (242)
T TIGR03411 144 LSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGS 219 (242)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCe
Confidence 999999999999999999999999999999999999988887754 378999999999876 5799999997765
No 405
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-35 Score=322.36 Aligned_cols=196 Identities=21% Similarity=0.228 Sum_probs=162.3
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCC-----CCccEEEeCCcCc--------cc
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS--------DL 248 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~--------~~ 248 (1075)
-+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|.+. .+
T Consensus 6 ~~~~~l~~~~~-~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 84 (251)
T PRK14244 6 ASVKNLNLWYG-SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLL 84 (251)
T ss_pred EEeeeEEEEEC-CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHH
Confidence 47899999985 4689999999999999999999999999999999999986 4799999998641 23
Q ss_pred cccEEEEcCCCCCCcCCHHHHhcCCCCCCcc--cCcCCHHHHHHHHHHcCChhH----HhcCCCCcccCCCCCCChhHHH
Q 001446 249 NKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE--VEPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQQ 322 (1075)
Q Consensus 249 ~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~g~~LSgGqkq 322 (1075)
++.++|+||++.++..|++||+.++...... .....++++.++++.+++.+. .++.+ .+|||||||
T Consensus 85 ~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LS~Gq~q 156 (251)
T PRK14244 85 RAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELGDRLKDSA--------FELSGGQQQ 156 (251)
T ss_pred hhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhhhHhhcCh--------hhCCHHHHH
Confidence 5679999999988888999999875211110 001123456678899998652 33333 689999999
Q ss_pred HHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 323 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 323 Rl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|++|||||+.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+. .||++++|++
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~ 223 (251)
T PRK14244 157 RLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQS 223 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEEC
Confidence 99999999999999999999999999999999888764 3789999999999875 6999999986
No 406
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.1e-35 Score=322.59 Aligned_cols=197 Identities=21% Similarity=0.295 Sum_probs=161.9
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----c-c-------
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----S-D------- 247 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~-~------- 247 (1075)
.++++|+++.|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ . .
T Consensus 6 ~l~~~~l~~~~~~-~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~~ 84 (258)
T PRK11701 6 LLSVRGLTKLYGP-RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAERR 84 (258)
T ss_pred eEEEeeeEEEcCC-ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHHH
Confidence 6899999999964 679999999999999999999999999999999999999999999999864 1 1
Q ss_pred --ccccEEEEcCCCC--CC-cCCHHHHhcCCCCCCcc-cCcCCHHHHHHHHHHcCChh-HHhcCCCCcccCCCCCCChhH
Q 001446 248 --LNKEIFYVPQRPY--TA-VGTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEY-LLDRYPPEKEINWGDELSLGE 320 (1075)
Q Consensus 248 --~~~~i~~v~Q~~~--~~-~~tv~~ni~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~g~~LSgGq 320 (1075)
.++.++|+||++. ++ ..|+.+|+.++...... .......++.++++.+++.+ ..++.+ .+|||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--------~~LS~Gq 156 (258)
T PRK11701 85 RLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDAARIDDLP--------TTFSGGM 156 (258)
T ss_pred HHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCChhHHhCCC--------ccCCHHH
Confidence 1346999999984 33 34888888653211000 00112345677888999863 556554 6899999
Q ss_pred HHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 321 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 321 kqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|||++|||||+.+|+++||||||++||+.+...+.+.+++ .|.|+|++||+.+.+. .||+++++++
T Consensus 157 ~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~ 227 (258)
T PRK11701 157 QQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQ 227 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 9999999999999999999999999999999999887753 3889999999999986 6999999986
No 407
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=327.39 Aligned_cols=203 Identities=23% Similarity=0.275 Sum_probs=165.9
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYV 914 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~V 914 (1075)
++++||+++|++..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ..++.+++||
T Consensus 4 l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v 83 (277)
T PRK13652 4 IETRDLCYSYSGSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVGLV 83 (277)
T ss_pred EEEEEEEEEeCCCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheEEE
Confidence 78999999997656799999999999999999999999999999999999999999999999988653 2345679999
Q ss_pred cCCC--CCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccC
Q 001446 915 PQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 992 (1075)
Q Consensus 915 pQdP--~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~ 992 (1075)
||+| .+|..|+++|+.++..... . .+...+..+.++++.++|.+...+. ...
T Consensus 84 ~q~~~~~~~~~tv~~~l~~~~~~~~----------~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~ 137 (277)
T PRK13652 84 FQNPDDQIFSPTVEQDIAFGPINLG----------L------DEETVAHRVSSALHMLGLEELRDRV----------PHH 137 (277)
T ss_pred ecCcccccccccHHHHHHhHHHHcC----------C------CHHHHHHHHHHHHHHCCChhHhcCC----------ccc
Confidence 9998 4788899999975321000 0 0001123456677877775544333 246
Q ss_pred CChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 993 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 993 LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
||||||||++|||||+++|++|||||||++||..+...+.+.+++ .++|+|+++|+++.+ ++.|+++.|.+|.
T Consensus 138 LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~ 215 (277)
T PRK13652 138 LSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGR 215 (277)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCe
Confidence 999999999999999999999999999999999998887776543 389999999999976 7999999997765
No 408
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=324.24 Aligned_cols=210 Identities=20% Similarity=0.199 Sum_probs=165.2
Q ss_pred CCceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCC-----CCCCeEecCCCCCccc----
Q 001446 834 QDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP-----VVSGSLTKPSQHIDEE---- 904 (1075)
Q Consensus 834 ~g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~-----~~sG~I~idg~di~~~---- 904 (1075)
.+.|+++||++.|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++ |++|+|.+||.++...
T Consensus 11 ~~~l~~~~l~~~~~~-~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~ 89 (260)
T PRK10744 11 PSKIQVRNLNFYYGK-FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDI 89 (260)
T ss_pred CceEEEEEEEEEeCC-eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccch
Confidence 467999999999975 479999999999999999999999999999999999986 4799999999988532
Q ss_pred cCCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCc
Q 001446 905 AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWD 984 (1075)
Q Consensus 905 ~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gld 984 (1075)
..+|.+++|+||+|.+|+.|+++|+.++..... +. .....++.+.++++.+++...+... ++
T Consensus 90 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~---------~~------~~~~~~~~~~~~l~~~~l~~~~~~~---~~ 151 (260)
T PRK10744 90 ALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFE---------KL------SRAEMDERVEWALTKAALWNEVKDK---LH 151 (260)
T ss_pred HHHhcceEEEecCCccCcCcHHHHHhhhHhhcC---------CC------CHHHHHHHHHHHHHHcCCChhhHHH---Hh
Confidence 234667999999999999999999975421000 00 0000123455667776663221110 11
Q ss_pred cccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCch-hhccceEEE
Q 001446 985 ANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRL 1061 (1075)
Q Consensus 985 t~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i-~~~~~~l~l 1061 (1075)
.....||||||||++||||++++|+||||||||++||.++...+.+.+++ .+.|+|+|+|++..+ .+.|+++.+
T Consensus 152 ---~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l 228 (260)
T PRK10744 152 ---QSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFM 228 (260)
T ss_pred ---cCCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEE
Confidence 12357999999999999999999999999999999999999888777654 478999999999865 689999999
Q ss_pred EcCC
Q 001446 1062 IDGE 1065 (1075)
Q Consensus 1062 ~~g~ 1065 (1075)
.+|.
T Consensus 229 ~~G~ 232 (260)
T PRK10744 229 YLGE 232 (260)
T ss_pred ECCE
Confidence 7764
No 409
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-35 Score=326.42 Aligned_cols=199 Identities=21% Similarity=0.221 Sum_probs=163.5
Q ss_pred CccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCC-----CCccEEEeCCcCc-------
Q 001446 179 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS------- 246 (1075)
Q Consensus 179 ~~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~------- 246 (1075)
...++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|.+.
T Consensus 37 ~~~l~~~~l~~~~~-~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~ 115 (286)
T PRK14275 37 KPHVVAKNFSIYYG-EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDE 115 (286)
T ss_pred ceEEEEeeeEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccch
Confidence 34689999999996 4579999999999999999999999999999999999864 4999999998531
Q ss_pred -cccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccC-cCCHHHHHHHHHHcCCh----hHHhcCCCCcccCCCCCCChhH
Q 001446 247 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVE-PLTHGGMVELLKNVDLE----YLLDRYPPEKEINWGDELSLGE 320 (1075)
Q Consensus 247 -~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~-~~~~~~~~~~l~~~~l~----~~~~~~~~~~~~~~g~~LSgGq 320 (1075)
.+++.++|+||+|.++..|++||+.++........ ....+++.++++.+++. +..++.+ ..|||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~--------~~LSgGq 187 (286)
T PRK14275 116 VLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVSDRLDKNA--------LGLSGGQ 187 (286)
T ss_pred HHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchhhHhhCCh--------hhCCHHH
Confidence 23567999999998887899999987532111100 11124456778888774 3333333 6899999
Q ss_pred HHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 321 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 321 kqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|||++|||||+.+|+++||||||++||+.+.+.+.+.+++. ++|+|++||+++.+. .||++++|++
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~ 256 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYE 256 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999888653 679999999999875 6999999986
No 410
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.9e-35 Score=335.60 Aligned_cols=189 Identities=22% Similarity=0.291 Sum_probs=161.2
Q ss_pred eEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc----------cccccEEEE
Q 001446 186 GVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------DLNKEIFYV 255 (1075)
Q Consensus 186 ~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~----------~~~~~i~~v 255 (1075)
|+++.|++ .. + |+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|+
T Consensus 4 ~l~~~~~~-~~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v 80 (354)
T TIGR02142 4 RFSKRLGD-FS-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYV 80 (354)
T ss_pred EEEEEECC-EE-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEEE
Confidence 78888853 33 5 99999999999999999999999999999999999999999998541 235679999
Q ss_pred cCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCC
Q 001446 256 PQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 334 (1075)
Q Consensus 256 ~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p 334 (1075)
||++.++. .|++||+.++..... .....+++.++++.++|.+..++.+ .+||||||||++|||||+.+|
T Consensus 81 ~q~~~l~~~~tv~enl~~~~~~~~--~~~~~~~~~~~l~~~gL~~~~~~~~--------~~LSgGqkqRvalAraL~~~p 150 (354)
T TIGR02142 81 FQEARLFPHLSVRGNLRYGMKRAR--PSERRISFERVIELLGIGHLLGRLP--------GRLSGGEKQRVAIGRALLSSP 150 (354)
T ss_pred ecCCccCCCCcHHHHHHHHhhccC--hhHHHHHHHHHHHHcCChhHhcCCh--------hhCCHHHHHHHHHHHHHHcCC
Confidence 99998876 499999998643211 1112345788999999998888876 689999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcCC
Q 001446 335 KFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGE 387 (1075)
Q Consensus 335 ~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~~ 387 (1075)
+++||||||++||+.+++.+.+.+++ .|+|+|++||+++.+. .+|++++|+++
T Consensus 151 ~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G 208 (354)
T TIGR02142 151 RLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDG 208 (354)
T ss_pred CEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCC
Confidence 99999999999999999998887754 3789999999999874 69999999863
No 411
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=1.5e-35 Score=310.42 Aligned_cols=187 Identities=26% Similarity=0.359 Sum_probs=157.1
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----ccccccEEEEc
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYVP 256 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v~ 256 (1075)
++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|++
T Consensus 1 l~~~~l~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (198)
T TIGR01189 1 LAARNLACSRG-ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQRDEPHRNILYLG 79 (198)
T ss_pred CEEEEEEEEEC-CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccchHHhhhheEEec
Confidence 46899999985 4679999999999999999999999999999999999999999999999864 12346799999
Q ss_pred CCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCC
Q 001446 257 QRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 335 (1075)
Q Consensus 257 Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~ 335 (1075)
|++.++. .|+++|+.+...... ....++.++++.+++.+..++.+ .+||||||||++||||++.+|+
T Consensus 80 q~~~~~~~~tv~~~l~~~~~~~~----~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la~al~~~p~ 147 (198)
T TIGR01189 80 HLPGLKPELSALENLHFWAAIHG----GAQRTIEDALAAVGLTGFEDLPA--------AQLSAGQQRRLALARLWLSRAP 147 (198)
T ss_pred cCcccccCCcHHHHHHHHHHHcC----CcHHHHHHHHHHcCCHHHhcCCh--------hhcCHHHHHHHHHHHHHhcCCC
Confidence 9988765 699999976432111 12345778999999988877765 6899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHhhCCeEE
Q 001446 336 FAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVL 382 (1075)
Q Consensus 336 illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~~~d~i~ 382 (1075)
++||||||++||+.+.+.+.+.+++ .|.|+|++||+...+. +++++
T Consensus 148 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~-~~~~~ 196 (198)
T TIGR01189 148 LWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLGLV-EAREL 196 (198)
T ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEccccccc-ceEEe
Confidence 9999999999999999999888764 4889999999885432 34444
No 412
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.2e-35 Score=314.85 Aligned_cols=200 Identities=20% Similarity=0.228 Sum_probs=162.9
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEcC
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 916 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~VpQ 916 (1075)
++++||+++|+. +++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.+||.++.+....+.+++||||
T Consensus 1 ~~~~~l~~~~~~---~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q 77 (213)
T TIGR01277 1 LALDKVRYEYEH---LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLAPYQRPVSMLFQ 77 (213)
T ss_pred CeEEeeeEEeCC---cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCChhccceEEEec
Confidence 368999999963 57899999999999999999999999999999999999999999999998765445667999999
Q ss_pred CCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCCh
Q 001446 917 RPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 995 (1075)
Q Consensus 917 dP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 995 (1075)
+|.+|.+ |+++|+.++...... .....+..+.++++.+++.+...+. ...||+
T Consensus 78 ~~~~~~~~t~~en~~~~~~~~~~----------------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS~ 131 (213)
T TIGR01277 78 ENNLFAHLTVRQNIGLGLHPGLK----------------LNAEQQEKVVDAAQQVGIADYLDRL----------PEQLSG 131 (213)
T ss_pred cCccCCCCcHHHHHHhHhhccCC----------------ccHHHHHHHHHHHHHcCcHHHhhCC----------cccCCH
Confidence 9999975 999999754210000 0001134456677888875544333 246999
Q ss_pred hHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 996 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 996 GQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
|||||++||||++++|+|+||||||++||.++...+.+.+++ .++|+|+|+|++..+ ++.|+++.|.+|.
T Consensus 132 G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~ 206 (213)
T TIGR01277 132 GQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGK 206 (213)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCe
Confidence 999999999999999999999999999999999887776543 389999999999865 6899999997654
No 413
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-35 Score=301.44 Aligned_cols=160 Identities=38% Similarity=0.642 Sum_probs=144.5
Q ss_pred EEEEeEEEEcCCC-CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEE
Q 001446 182 IEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 254 (1075)
Q Consensus 182 i~~~~v~~~~~~~-~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 254 (1075)
++++|+++.|++. .++++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|
T Consensus 1 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (171)
T cd03228 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAY 80 (171)
T ss_pred CEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEEE
Confidence 4689999999653 379999999999999999999999999999999999999999999999864 123567999
Q ss_pred EcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCC
Q 001446 255 VPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 334 (1075)
Q Consensus 255 v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p 334 (1075)
+||+|.++..|+.||+ ||||||||++||||++.+|
T Consensus 81 ~~~~~~~~~~t~~e~l---------------------------------------------LS~G~~~rl~la~al~~~p 115 (171)
T cd03228 81 VPQDPFLFSGTIRENI---------------------------------------------LSGGQRQRIAIARALLRDP 115 (171)
T ss_pred EcCCchhccchHHHHh---------------------------------------------hCHHHHHHHHHHHHHhcCC
Confidence 9999988878888876 8999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHhhCCeEEEEcC
Q 001446 335 KFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 386 (1075)
Q Consensus 335 ~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~~~d~i~~l~~ 386 (1075)
+++||||||++||+.+...+.+.+++ .++|+|++||+++.+..||++++|++
T Consensus 116 ~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~ 169 (171)
T cd03228 116 PILILDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDD 169 (171)
T ss_pred CEEEEECCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcC
Confidence 99999999999999999999888764 36899999999999888999999975
No 414
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.4e-35 Score=323.03 Aligned_cols=203 Identities=20% Similarity=0.240 Sum_probs=162.2
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc----------cC
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE----------AG 906 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~----------~~ 906 (1075)
|+++||++.|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.++|.++... ..
T Consensus 4 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK11264 4 IEVKNLVKKFHG-QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIRQ 82 (250)
T ss_pred EEEeceEEEECC-eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHHH
Confidence 789999999975 4699999999999999999999999999999999999999999999999988642 12
Q ss_pred CcCcEEEEcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcc
Q 001446 907 SGCGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 985 (1075)
Q Consensus 907 ~r~~i~~VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt 985 (1075)
.|.+++||||+|.+|+ .|+++|+.++..... +. ......+.+.++++.+++......
T Consensus 83 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---------~~------~~~~~~~~~~~~l~~~gl~~~~~~------- 140 (250)
T PRK11264 83 LRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK---------GE------PKEEATARARELLAKVGLAGKETS------- 140 (250)
T ss_pred hhhhEEEEecCcccCCCCCHHHHHHHHHHHhc---------CC------CHHHHHHHHHHHHHHcCCcchhhC-------
Confidence 3567999999999886 699999975310000 00 000012334566777776433211
Q ss_pred ccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCch-hhccceEEE
Q 001446 986 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRL 1061 (1075)
Q Consensus 986 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i-~~~~~~l~l 1061 (1075)
....||||||||++||||++++|++|||||||++||.++...+.+.+++ .++|+|+|+|+++.+ ++.|+++.|
T Consensus 141 ---~~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l 217 (250)
T PRK11264 141 ---YPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFM 217 (250)
T ss_pred ---ChhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEE
Confidence 2357999999999999999999999999999999999999888776543 489999999999866 679999999
Q ss_pred EcCC
Q 001446 1062 IDGE 1065 (1075)
Q Consensus 1062 ~~g~ 1065 (1075)
.+|.
T Consensus 218 ~~G~ 221 (250)
T PRK11264 218 DQGR 221 (250)
T ss_pred ECCE
Confidence 7764
No 415
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=323.81 Aligned_cols=208 Identities=19% Similarity=0.207 Sum_probs=165.7
Q ss_pred CCceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc---------
Q 001446 834 QDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--------- 904 (1075)
Q Consensus 834 ~g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--------- 904 (1075)
.+.|+++||++.|++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.++|.++...
T Consensus 3 ~~~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (257)
T PRK10619 3 ENKLNVIDLHKRYGE-HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKV 81 (257)
T ss_pred CccEEEeeeEEEECC-EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccccccc
Confidence 367999999999975 5799999999999999999999999999999999999999999999999987531
Q ss_pred ------cCCcCcEEEEcCCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhh
Q 001446 905 ------AGSGCGIFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLE 977 (1075)
Q Consensus 905 ------~~~r~~i~~VpQdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~ 977 (1075)
...|.+++||||+|.+|++ |+++|+.++... ..+. .....++.+.++++.+++.....
T Consensus 82 ~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~---------~~~~------~~~~~~~~~~~~l~~~gl~~~~~ 146 (257)
T PRK10619 82 ADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQ---------VLGL------SKQEARERAVKYLAKVGIDERAQ 146 (257)
T ss_pred ccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHH---------hCCC------CHHHHHHHHHHHHHHcCCChhhh
Confidence 1235679999999999975 999999753100 0000 00001234566777777744321
Q ss_pred hhccCCccccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCchh-
Q 001446 978 REEVGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIP- 1053 (1075)
Q Consensus 978 ~~~~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i~- 1053 (1075)
+ .....||||||||++|||||+++|+++||||||++||.++.+.+.+.+++ .++|+|+|+|+++.+.
T Consensus 147 ------~---~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~ 217 (257)
T PRK10619 147 ------G---KYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARH 217 (257)
T ss_pred ------h---CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH
Confidence 0 11356999999999999999999999999999999999999888776543 4899999999998765
Q ss_pred hccceEEEEcCCc
Q 001446 1054 FHSLELRLIDGEG 1066 (1075)
Q Consensus 1054 ~~~~~l~l~~g~g 1066 (1075)
+.|+++.|.+|.-
T Consensus 218 ~~d~i~~l~~G~i 230 (257)
T PRK10619 218 VSSHVIFLHQGKI 230 (257)
T ss_pred hcCEEEEEECCEE
Confidence 7899999987763
No 416
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.5e-35 Score=330.13 Aligned_cols=199 Identities=26% Similarity=0.347 Sum_probs=161.8
Q ss_pred ccEEEEeEEEEcCC---CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCC---ccEEEeCCcCc------c
Q 001446 180 NYIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV---SGHIAKPGVGS------D 247 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~---~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~---~G~i~~~~~~~------~ 247 (1075)
..++++|+++.|+. ..++++|+||+|++||+++|+|+||||||||+++|+|+++|. +|+|.++|.+- +
T Consensus 11 ~~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~ 90 (330)
T PRK09473 11 ALLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKE 90 (330)
T ss_pred ceEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHH
Confidence 46999999999853 246999999999999999999999999999999999999996 99999999641 1
Q ss_pred ---cc-ccEEEEcCCCC--CC-cCCHHHHhcCCCCCCc-ccCcCCHHHHHHHHHHcCChh---HHhcCCCCcccCCCCCC
Q 001446 248 ---LN-KEIFYVPQRPY--TA-VGTLRDQLIYPLTSDQ-EVEPLTHGGMVELLKNVDLEY---LLDRYPPEKEINWGDEL 316 (1075)
Q Consensus 248 ---~~-~~i~~v~Q~~~--~~-~~tv~~ni~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~---~~~~~~~~~~~~~g~~L 316 (1075)
++ +.|+||||+|. +. ..|+.+|+..+..... .......+++.++++.++|.+ ..+++| .+|
T Consensus 91 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~~~~~~~~p--------~~L 162 (330)
T PRK09473 91 LNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYP--------HEF 162 (330)
T ss_pred HHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCChHHHhcCCc--------ccC
Confidence 12 47999999983 33 3588888865432111 111112345678899999864 234555 689
Q ss_pred ChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 317 SLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 317 SgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|||||||++|||||+.+|++||+||||++||..+...+++.+++ .|.|+|+||||++.+. .+|+|++|.+
T Consensus 163 SgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~ 237 (330)
T PRK09473 163 SGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYA 237 (330)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999998887653 3899999999999885 6999999975
No 417
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.1e-35 Score=317.62 Aligned_cols=198 Identities=22% Similarity=0.293 Sum_probs=162.5
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEEE
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFY 913 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~~ 913 (1075)
-|+++||++.|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++...+ ..+.+++|
T Consensus 7 ~i~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 85 (225)
T PRK10247 7 LLQLQNVGYLAGD-AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVSY 85 (225)
T ss_pred eEEEeccEEeeCC-ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccEE
Confidence 5899999999964 56999999999999999999999999999999999999999999999999887652 24567999
Q ss_pred EcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchh-hhhhhccCCccccccccC
Q 001446 914 VPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSY-LLEREEVGWDANLNWEDI 992 (1075)
Q Consensus 914 VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~-~i~~~~~Gldt~~~~g~~ 992 (1075)
+||+|.+|+.|+++|+.++... .+. ...+..+.++++.+++.. .... ....
T Consensus 86 ~~q~~~l~~~tv~enl~~~~~~----------~~~--------~~~~~~~~~~l~~~~l~~~~~~~----------~~~~ 137 (225)
T PRK10247 86 CAQTPTLFGDTVYDNLIFPWQI----------RNQ--------QPDPAIFLDDLERFALPDTILTK----------NIAE 137 (225)
T ss_pred EecccccccccHHHHHHhHHhh----------cCC--------ChHHHHHHHHHHHcCCChHHhcC----------Cccc
Confidence 9999999999999999753110 000 001233456677777632 2211 1357
Q ss_pred CChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCchhhccceEEEE
Q 001446 993 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRLI 1062 (1075)
Q Consensus 993 LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i~~~~~~l~l~ 1062 (1075)
||+|||||++|||||+++|+++||||||++||..+...+.+.+++ .++|+|+|+|+++.+.+.|+++.|.
T Consensus 138 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~ 211 (225)
T PRK10247 138 LSGGEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQ 211 (225)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEe
Confidence 999999999999999999999999999999999998877766543 3889999999999889999999994
No 418
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-35 Score=312.37 Aligned_cols=206 Identities=31% Similarity=0.394 Sum_probs=167.5
Q ss_pred EEEEeEEEEcCCC---CeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCC-C----CccEEEeCCcC------c-
Q 001446 182 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-L----VSGHIAKPGVG------S- 246 (1075)
Q Consensus 182 i~~~~v~~~~~~~---~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~-~----~~G~i~~~~~~------~- 246 (1075)
++++|++++|+.. ..+++|+||++++||+++|+|+|||||||+.++|+|+++ | .+|+|.++|.+ +
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 6789999988653 479999999999999999999999999999999999998 3 57999999974 1
Q ss_pred --cc-cccEEEEcCCCCC---CcCCHHHHhcCCCCCCcc--cCcCCHHHHHHHHHHcCChh---HHhcCCCCcccCCCCC
Q 001446 247 --DL-NKEIFYVPQRPYT---AVGTLRDQLIYPLTSDQE--VEPLTHGGMVELLKNVDLEY---LLDRYPPEKEINWGDE 315 (1075)
Q Consensus 247 --~~-~~~i~~v~Q~~~~---~~~tv~~ni~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~---~~~~~~~~~~~~~g~~ 315 (1075)
.+ .+.|+|+||+|.. +..||.+++.-....... ......+++.++|+.+++.+ ..+.+| ++
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YP--------he 153 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYP--------HE 153 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCC--------cc
Confidence 22 3579999999942 335888877643321111 11123456888999999975 568888 79
Q ss_pred CChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcCCCcE
Q 001446 316 LSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGEGEW 390 (1075)
Q Consensus 316 LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~~g~~ 390 (1075)
|||||||||.||.||+.+|++||.||||+|||.....+|++.+++ .|.++|+||||+..+. .||+|++|.. |+
T Consensus 154 lSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYa--G~ 231 (316)
T COG0444 154 LSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYA--GR 231 (316)
T ss_pred cCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEEC--cE
Confidence 999999999999999999999999999999999999998887753 5999999999999875 7999999985 45
Q ss_pred EEecCCC
Q 001446 391 RVHDKRD 397 (1075)
Q Consensus 391 ~~~~~~~ 397 (1075)
.++.+..
T Consensus 232 iVE~g~~ 238 (316)
T COG0444 232 IVEEGPV 238 (316)
T ss_pred EEEeCCH
Confidence 6665443
No 419
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-35 Score=320.26 Aligned_cols=197 Identities=21% Similarity=0.255 Sum_probs=162.6
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCC-----CccEEEeCCcCc-------cc
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS-------DL 248 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~-------~~ 248 (1075)
.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+. .+
T Consensus 3 ~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~ 81 (249)
T PRK14253 3 KFNIENLDLFYG-ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADL 81 (249)
T ss_pred eEEEeccEEEEC-CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHH
Confidence 588999999996 46799999999999999999999999999999999999986 599999998531 23
Q ss_pred cccEEEEcCCCCCCcCCHHHHhcCCCCCCccc-CcCCHHHHHHHHHHcCChhH----HhcCCCCcccCCCCCCChhHHHH
Q 001446 249 NKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQQR 323 (1075)
Q Consensus 249 ~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~g~~LSgGqkqR 323 (1075)
++.++|+||+|.++..|++||+.++....... .....+++.++++.+++.+. .++. ..+||||||||
T Consensus 82 ~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------~~~LS~G~~qr 153 (249)
T PRK14253 82 RIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVKDRLKSH--------AFGLSGGQQQR 153 (249)
T ss_pred HhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhhHHhhcC--------cccCCHHHHHH
Confidence 56799999999888899999998753221100 11112345667788887532 3332 26899999999
Q ss_pred HHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 324 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 324 l~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
++|||||+.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+. .||++++|++
T Consensus 154 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~ 219 (249)
T PRK14253 154 LCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLM 219 (249)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999888765 3689999999999875 5999999986
No 420
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=328.73 Aligned_cols=200 Identities=22% Similarity=0.237 Sum_probs=161.6
Q ss_pred eEEeeeeeeCCCc----cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc------cC
Q 001446 837 ISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE------AG 906 (1075)
Q Consensus 837 I~f~~V~~~yp~~----~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~------~~ 906 (1075)
|+++||++.|++. .++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++... ..
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 7899999999752 4699999999999999999999999999999999999999999999999988653 12
Q ss_pred CcCcEEEEcCCC--CCCCcchhhhhcCCCCh---HHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchh-hhhhhc
Q 001446 907 SGCGIFYVPQRP--YTCLGTLRDQIIYPLSR---EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSY-LLEREE 980 (1075)
Q Consensus 907 ~r~~i~~VpQdP--~Lf~gTir~NL~~p~~~---~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~-~i~~~~ 980 (1075)
.|.+|+|+||+| .+|+.|+++|+.++... ... .....+.++++.++|.. ....
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~-------------------~~~~~~~~~l~~~~l~~~~~~~-- 141 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQE-------------------EAEALAREKLALVGISESLFEK-- 141 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHH-------------------HHHHHHHHHHHHcCCChhhhhC--
Confidence 456799999998 68889999999753110 000 01122345566666632 2111
Q ss_pred cCCccccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCch-hhcc
Q 001446 981 VGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHS 1056 (1075)
Q Consensus 981 ~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i-~~~~ 1056 (1075)
....||||||||++|||||+++|++|||||||++||.++...+.+.+++ .++|||+|+|+++.+ .+.|
T Consensus 142 --------~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d 213 (280)
T PRK13649 142 --------NPFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYAD 213 (280)
T ss_pred --------CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCC
Confidence 1356999999999999999999999999999999999999888776643 489999999999865 6899
Q ss_pred ceEEEEcCC
Q 001446 1057 LELRLIDGE 1065 (1075)
Q Consensus 1057 ~~l~l~~g~ 1065 (1075)
+++.|.+|.
T Consensus 214 ~i~~l~~G~ 222 (280)
T PRK13649 214 FVYVLEKGK 222 (280)
T ss_pred EEEEEECCE
Confidence 999997764
No 421
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-35 Score=302.12 Aligned_cols=162 Identities=29% Similarity=0.379 Sum_probs=145.0
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-c-------cccccEE
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-S-------DLNKEIF 253 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-~-------~~~~~i~ 253 (1075)
++++|+++.|+ ++++++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ . ..++.++
T Consensus 1 i~~~~l~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 79 (178)
T cd03229 1 LELKNVSKRYG-QKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRIG 79 (178)
T ss_pred CEEEEEEEEEC-CeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcEE
Confidence 46899999986 4679999999999999999999999999999999999999999999999853 1 2346799
Q ss_pred EEcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcC
Q 001446 254 YVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 332 (1075)
Q Consensus 254 ~v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~ 332 (1075)
|++|+|.++. .|++||+.+. ||||||||++|||||++
T Consensus 80 ~~~q~~~~~~~~t~~~~l~~~------------------------------------------lS~G~~qr~~la~al~~ 117 (178)
T cd03229 80 MVFQDFALFPHLTVLENIALG------------------------------------------LSGGQQQRVALARALAM 117 (178)
T ss_pred EEecCCccCCCCCHHHheeec------------------------------------------CCHHHHHHHHHHHHHHC
Confidence 9999998775 4999988652 89999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHh---c-CCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 333 KPKFAILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 333 ~p~illLDEpts~LD~~~~~~i~~~l~~---~-~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
+|+++||||||++||+.++..+.+.+++ . ++|+|++||+++.+. .+|++++|++
T Consensus 118 ~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 176 (178)
T cd03229 118 DPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRD 176 (178)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeC
Confidence 9999999999999999999999887754 3 789999999999987 6999999975
No 422
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-35 Score=323.22 Aligned_cols=209 Identities=21% Similarity=0.234 Sum_probs=164.8
Q ss_pred CceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCC-----CCCeEecCCCCCccc----c
Q 001446 835 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPV-----VSGSLTKPSQHIDEE----A 905 (1075)
Q Consensus 835 g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~-----~sG~I~idg~di~~~----~ 905 (1075)
.-|+++|++++|++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++| .+|+|.+||.++... .
T Consensus 6 ~~l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 6 AIIETENLNLFYTD-FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred ceEEEeeeEEEeCC-ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 36999999999975 5699999999999999999999999999999999999987 489999999987532 2
Q ss_pred CCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcc
Q 001446 906 GSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 985 (1075)
Q Consensus 906 ~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt 985 (1075)
..|.+++||||+|.+|+.|+++||.++.... +.. .....++.+.++++.+++...+ ++.+++
T Consensus 85 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~----------~~~-----~~~~~~~~~~~~l~~~~l~~~l---~~~~~~ 146 (254)
T PRK14273 85 ELRRKIGMVFQTPNPFLMSIYDNISYGPKIH----------GTK-----DKKKLDEIVEQSLKKSALWNEV---KDKLNT 146 (254)
T ss_pred HHhhceEEEeeccccccCcHHHHHHHHHHhc----------CCC-----CHHHHHHHHHHHHHHhCCchhh---HHHHhC
Confidence 3456799999999999999999997642100 000 0000123455566666653221 122333
Q ss_pred ccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCch-hhccceEEEE
Q 001446 986 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLI 1062 (1075)
Q Consensus 986 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i-~~~~~~l~l~ 1062 (1075)
. ...||||||||++|||||+++|++|||||||++||..+...+.+++++ .++|+|+|+|+++.+ ++.|+++.|.
T Consensus 147 ~---~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~ 223 (254)
T PRK14273 147 N---ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFL 223 (254)
T ss_pred C---cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 2 357999999999999999999999999999999999999888777654 478999999999865 7899999997
Q ss_pred cCC
Q 001446 1063 DGE 1065 (1075)
Q Consensus 1063 ~g~ 1065 (1075)
+|.
T Consensus 224 ~G~ 226 (254)
T PRK14273 224 NGC 226 (254)
T ss_pred CCE
Confidence 665
No 423
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=1.9e-35 Score=309.87 Aligned_cols=192 Identities=26% Similarity=0.353 Sum_probs=158.6
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc-cCCcCcEEEEc
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYVP 915 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~-~~~r~~i~~Vp 915 (1075)
|+++||++.|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++... ...|.+++|+|
T Consensus 1 l~i~~l~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (201)
T cd03231 1 LEADELTCERDG-RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQRDSIARGLLYLG 79 (201)
T ss_pred CEEEEEEEEeCC-ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccccHHhhhheEEec
Confidence 478999999865 5699999999999999999999999999999999999999999999999987654 23456799999
Q ss_pred CCCCCC-CcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCC
Q 001446 916 QRPYTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 994 (1075)
Q Consensus 916 QdP~Lf-~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 994 (1075)
|+|.++ ..|+++|+.++... ..++.+.++++.+++.+.... . ...||
T Consensus 80 q~~~~~~~~tv~e~l~~~~~~----------------------~~~~~~~~~l~~~~l~~~~~~-------~---~~~LS 127 (201)
T cd03231 80 HAPGIKTTLSVLENLRFWHAD----------------------HSDEQVEEALARVGLNGFEDR-------P---VAQLS 127 (201)
T ss_pred cccccCCCcCHHHHHHhhccc----------------------ccHHHHHHHHHHcCChhhhcC-------c---hhhCC
Confidence 999886 57999999754210 013345566777777433211 1 34699
Q ss_pred hhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCC-CchhhccceEEE
Q 001446 995 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRP-ALIPFHSLELRL 1061 (1075)
Q Consensus 995 gGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRl-s~i~~~~~~l~l 1061 (1075)
||||||++||||++++|++|||||||++||..+.+.+.+.+++ .++|+|+|+|+. ....+.++++.+
T Consensus 128 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 128 AGQQRRVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 9999999999999999999999999999999999888877643 489999999976 577888888877
No 424
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.5e-35 Score=329.46 Aligned_cols=204 Identities=22% Similarity=0.277 Sum_probs=164.9
Q ss_pred CceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc-cCCcCcEEE
Q 001446 835 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFY 913 (1075)
Q Consensus 835 g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~-~~~r~~i~~ 913 (1075)
..|+++||++.|++ ..+|+||||+|++||.+||+||||||||||+++|.|+++|++|+|.++|.|+... ...|.+|+|
T Consensus 6 ~~i~i~~l~k~~~~-~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~ig~ 84 (306)
T PRK13537 6 APIDFRNVEKRYGD-KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRVGV 84 (306)
T ss_pred ceEEEEeEEEEECC-eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcEEE
Confidence 46999999999974 5799999999999999999999999999999999999999999999999998764 234667999
Q ss_pred EcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccC
Q 001446 914 VPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 992 (1075)
Q Consensus 914 VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~ 992 (1075)
|||+|.+|. .|++|||.|.... .+.. .......+.++++.++|... .++.. ..
T Consensus 85 v~q~~~~~~~~tv~e~l~~~~~~----------~~~~------~~~~~~~~~~~l~~~~l~~~-------~~~~~---~~ 138 (306)
T PRK13537 85 VPQFDNLDPDFTVRENLLVFGRY----------FGLS------AAAARALVPPLLEFAKLENK-------ADAKV---GE 138 (306)
T ss_pred EeccCcCCCCCcHHHHHHHHHHH----------cCCC------HHHHHHHHHHHHHHcCCchH-------hcCch---hh
Confidence 999999986 6999999752100 0000 00011234566677766432 22222 46
Q ss_pred CChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 993 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 993 LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
||+|||||++|||||+++|++|||||||++||+.+...+.+.+++ .|+|+|+++|.++.+ +++|+++.|.+|.
T Consensus 139 LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~ 215 (306)
T PRK13537 139 LSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGR 215 (306)
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999888777654 489999999999865 6899999997765
No 425
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=321.44 Aligned_cols=203 Identities=25% Similarity=0.304 Sum_probs=162.4
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcc--------ccCCc
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDE--------EAGSG 908 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~--------~~~~r 908 (1075)
|+++||++.|++ +++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++.. ....|
T Consensus 3 l~~~~l~~~~~~-~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 81 (242)
T PRK11124 3 IQLNGINCFYGA-HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRELR 81 (242)
T ss_pred EEEEeeEEEECC-eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHHH
Confidence 789999999964 579999999999999999999999999999999999999999999999998731 12345
Q ss_pred CcEEEEcCCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc
Q 001446 909 CGIFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 987 (1075)
Q Consensus 909 ~~i~~VpQdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 987 (1075)
.+++|+||+|.+|.+ |+++|+.+.... ..+.. .....+.+.++++.+++.......
T Consensus 82 ~~i~~~~q~~~~~~~~tv~e~i~~~~~~---------~~~~~------~~~~~~~~~~~l~~~gl~~~~~~~-------- 138 (242)
T PRK11124 82 RNVGMVFQQYNLWPHLTVQQNLIEAPCR---------VLGLS------KDQALARAEKLLERLRLKPYADRF-------- 138 (242)
T ss_pred hheEEEecCccccCCCcHHHHHHHHHHH---------HcCCC------HHHHHHHHHHHHHHcCChhhhhCC--------
Confidence 679999999999975 999999641100 00000 000123455667777775443322
Q ss_pred ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCch-hhccceEEEEc
Q 001446 988 NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLID 1063 (1075)
Q Consensus 988 ~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i-~~~~~~l~l~~ 1063 (1075)
...||||||||++||||++++|+++||||||++||.++...+.+.+++ .+.|+|+|+|++..+ ++.|+++.|.+
T Consensus 139 --~~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~ 216 (242)
T PRK11124 139 --PLHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMEN 216 (242)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 246999999999999999999999999999999999999887776643 489999999999876 57899999977
Q ss_pred CC
Q 001446 1064 GE 1065 (1075)
Q Consensus 1064 g~ 1065 (1075)
|.
T Consensus 217 g~ 218 (242)
T PRK11124 217 GH 218 (242)
T ss_pred CE
Confidence 65
No 426
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-35 Score=320.62 Aligned_cols=198 Identities=22% Similarity=0.257 Sum_probs=161.6
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCC--C---CccEEEeCCcCc--------
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP--L---VSGHIAKPGVGS-------- 246 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~--~---~~G~i~~~~~~~-------- 246 (1075)
..++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+.+ | ++|+|.++|.+.
T Consensus 4 ~~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 4 KIITSSDVHLFYG-KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred ceEEEEeEEEEEC-CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 3689999999996 4679999999999999999999999999999999999875 4 599999998631
Q ss_pred cccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccC-cCCHHHHHHHHHHcCCh----hHHhcCCCCcccCCCCCCChhHH
Q 001446 247 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVE-PLTHGGMVELLKNVDLE----YLLDRYPPEKEINWGDELSLGEQ 321 (1075)
Q Consensus 247 ~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~-~~~~~~~~~~l~~~~l~----~~~~~~~~~~~~~~g~~LSgGqk 321 (1075)
.+++.++|+||++.++..|+++|+.++........ ...++++.+.++.+++. +..++.+ .+||||||
T Consensus 83 ~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~--------~~LS~Gq~ 154 (252)
T PRK14255 83 QLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVKDHLHESA--------LSLSGGQQ 154 (252)
T ss_pred HhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchhhHHhcCc--------ccCCHHHH
Confidence 23567999999998888899999987532111000 11123455677777764 2233333 68999999
Q ss_pred HHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 322 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 322 qRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
||++|||||+.+|+++||||||++||+.+++.+.+.+++. +.|+|++||+++.+. .||++++|++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~ 222 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLT 222 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999998888653 689999999999875 6999999986
No 427
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=2.2e-35 Score=323.24 Aligned_cols=198 Identities=28% Similarity=0.427 Sum_probs=164.0
Q ss_pred cEEEEeEEEEcCC--------CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc------
Q 001446 181 YIEFSGVKVVTPT--------GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------ 246 (1075)
Q Consensus 181 ~i~~~~v~~~~~~--------~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~------ 246 (1075)
.|+++||++.|++ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 5899999999973 46899999999999999999999999999999999999999999999998641
Q ss_pred ---cccccEEEEcCCCC--CC-cCCHHHHhcCCCCCC-cccCcCCHHHHHHHHHHcCCh-hHHhcCCCCcccCCCCCCCh
Q 001446 247 ---DLNKEIFYVPQRPY--TA-VGTLRDQLIYPLTSD-QEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSL 318 (1075)
Q Consensus 247 ---~~~~~i~~v~Q~~~--~~-~~tv~~ni~~~~~~~-~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSg 318 (1075)
.+++.++|+||++. ++ ..|+.+|+.++.... .........++.++++.+++. ...++.+ ..|||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~--------~~LS~ 154 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDSVLDKRP--------PQLSG 154 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChhHhhCCC--------ccCCh
Confidence 13567999999983 33 469999986532110 001111234577889999996 4566654 68999
Q ss_pred hHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 319 GEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 319 GqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|||||++|||||+.+|+++||||||++||+.+.+.+.+.+++ .+.|+|++||+++.+. .||++++|++
T Consensus 155 Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~ 227 (268)
T PRK10419 155 GQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDN 227 (268)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999988887753 3889999999999986 6999999986
No 428
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-35 Score=319.96 Aligned_cols=200 Identities=21% Similarity=0.227 Sum_probs=162.1
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCC-----CCccEEEeCCcCc--------
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS-------- 246 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~-------- 246 (1075)
..++++||++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.+.
T Consensus 9 ~~l~i~~v~~~~~-~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 9 TVLRTENLNVYYG-SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred eEEEEeeeEEEEC-CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 3699999999985 4579999999999999999999999999999999999986 4899999998531
Q ss_pred cccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHH
Q 001446 247 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 326 (1075)
Q Consensus 247 ~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~l 326 (1075)
.++++++|++|++.++..|++||+.++...... .....+++.++++.+++.+.+.... .....+||||||||++|
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~l~~~~----~~~~~~LSgGq~qrv~l 162 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGY-KGDMDELVERSLRQAALWDEVKDKL----KQSGLSLSGGQQQRLCI 162 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCc-chHHHHHHHHHHHHhCchhhHHHHh----cCCcccCCHHHHHHHHH
Confidence 235679999999988878999999876432111 1112344566778888754322110 01136899999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhH-hhCCeEEEEc
Q 001446 327 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLD 385 (1075)
Q Consensus 327 Aral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~-~~~d~i~~l~ 385 (1075)
||||+.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+ ..||++++|+
T Consensus 163 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~ 224 (264)
T PRK14243 163 ARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFN 224 (264)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEe
Confidence 9999999999999999999999999999888764 368999999999886 5799999997
No 429
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2.1e-35 Score=318.00 Aligned_cols=202 Identities=24% Similarity=0.285 Sum_probs=165.3
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEcC
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 916 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~VpQ 916 (1075)
|+++|++++|++ +++|+|+||+|.+||.++|+||||||||||+++|.|+++|.+|+|.+||.++...+..+..++|+||
T Consensus 1 i~i~~l~~~~~~-~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~~~~~i~~~~q 79 (237)
T TIGR00968 1 IEIANISKRFGS-FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHARDRKIGFVFQ 79 (237)
T ss_pred CEEEEEEEEECC-eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcCEEEEec
Confidence 578999999975 4799999999999999999999999999999999999999999999999998766545667999999
Q ss_pred CCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCCh
Q 001446 917 RPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 995 (1075)
Q Consensus 917 dP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 995 (1075)
+|.+|++ |+++|+.+..... +. .....++.+.++++.+++....... ...||+
T Consensus 80 ~~~~~~~~t~~enl~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~lS~ 133 (237)
T TIGR00968 80 HYALFKHLTVRDNIAFGLEIR----------KH------PKAKIKARVEELLELVQLEGLGDRY----------PNQLSG 133 (237)
T ss_pred ChhhccCCcHHHHHHhHHHhc----------CC------CHHHHHHHHHHHHHHcCCHhHhhCC----------hhhCCH
Confidence 9999976 9999997531100 00 0000123455667777775443322 246999
Q ss_pred hHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---c-CceEEEecCCCCc-hhhccceEEEEcCC
Q 001446 996 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---M-GITFVTSSQRPAL-IPFHSLELRLIDGE 1065 (1075)
Q Consensus 996 GQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~-~~TvI~IaHRls~-i~~~~~~l~l~~g~ 1065 (1075)
|||||++||||++++|+++||||||++||.++...+.+.+++ . ++|+|+++|+++. .++.|+++.+.+|.
T Consensus 134 G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~ 208 (237)
T TIGR00968 134 GQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGK 208 (237)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCE
Confidence 999999999999999999999999999999999888777653 3 7999999999985 57899999997665
No 430
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.2e-35 Score=313.84 Aligned_cols=196 Identities=21% Similarity=0.224 Sum_probs=157.4
Q ss_pred EeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc------CCcCcEE
Q 001446 839 FSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA------GSGCGIF 912 (1075)
Q Consensus 839 f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~------~~r~~i~ 912 (1075)
++||++.|++ +++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.+++.+. ..+.+++
T Consensus 1 i~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~ 79 (206)
T TIGR03608 1 LKNISKKFGD-KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKLG 79 (206)
T ss_pred CcceEEEECC-EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCee
Confidence 4688998874 57999999999999999999999999999999999999999999999999875431 2355799
Q ss_pred EEcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccccccc
Q 001446 913 YVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 991 (1075)
Q Consensus 913 ~VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~ 991 (1075)
|++|+|.+|. .|+++|+.++.... +. .....++.+.++++.+++.+...+. ..
T Consensus 80 ~~~q~~~~~~~~t~~e~~~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~ 133 (206)
T TIGR03608 80 YLFQNFALIENETVEENLDLGLKYK----------KL------SKKEKREKKKEALEKVGLNLKLKQK----------IY 133 (206)
T ss_pred EEecchhhccCCcHHHHHHHHHHhc----------CC------CHHHHHHHHHHHHHHcCchhhhcCC----------hh
Confidence 9999999997 69999997521000 00 0001133456677777774433221 34
Q ss_pred CCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCchhhccceEEE
Q 001446 992 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIPFHSLELRL 1061 (1075)
Q Consensus 992 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i~~~~~~l~l 1061 (1075)
.||+|||||++|||||+++|++|||||||++||.++.+.+.+.+++ .+.|+|+|+|++..+++.|+++.|
T Consensus 134 ~lS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 134 ELSGGEQQRVALARAILKDPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 6999999999999999999999999999999999999888777654 489999999999988888887754
No 431
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.6e-35 Score=320.28 Aligned_cols=203 Identities=23% Similarity=0.308 Sum_probs=163.7
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc----cCCcCcEE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE----AGSGCGIF 912 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~----~~~r~~i~ 912 (1075)
|+++|++++|++ +++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++... ...+.+++
T Consensus 2 l~~~~l~~~~~~-~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 80 (240)
T PRK09493 2 IEFKNVSKHFGP-TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAG 80 (240)
T ss_pred EEEEeEEEEECC-eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhceE
Confidence 689999999864 5799999999999999999999999999999999999999999999999988753 23456799
Q ss_pred EEcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccccccc
Q 001446 913 YVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 991 (1075)
Q Consensus 913 ~VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~ 991 (1075)
|+||+|.+|. .|+++|+.++.... .+. .....++.+.++++.+++.+..... ..
T Consensus 81 ~~~q~~~~~~~~tv~~~l~~~~~~~---------~~~------~~~~~~~~~~~~l~~~gl~~~~~~~----------~~ 135 (240)
T PRK09493 81 MVFQQFYLFPHLTALENVMFGPLRV---------RGA------SKEEAEKQARELLAKVGLAERAHHY----------PS 135 (240)
T ss_pred EEecccccCCCCcHHHHHHhHHHHh---------cCC------CHHHHHHHHHHHHHHcCChHHHhcC----------hh
Confidence 9999999886 59999997632100 000 0001123455677777775443322 24
Q ss_pred CCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 992 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 992 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
.||+|||||++||||++++|++|||||||++||.++...+.+.+++ .++|+|+|+|++..+ .+.|+++.+.+|.
T Consensus 136 ~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 213 (240)
T PRK09493 136 ELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGR 213 (240)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999888776643 489999999999876 5789999997664
No 432
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-35 Score=322.28 Aligned_cols=199 Identities=21% Similarity=0.258 Sum_probs=164.7
Q ss_pred CccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCC-----CccEEEeCCcCc-------
Q 001446 179 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS------- 246 (1075)
Q Consensus 179 ~~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~------- 246 (1075)
.+.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+.
T Consensus 23 ~~~l~~~nl~~~~~-~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~ 101 (272)
T PRK14236 23 QTALEVRNLNLFYG-DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDV 101 (272)
T ss_pred CcEEEEEEEEEEEC-CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCH
Confidence 45799999999996 46799999999999999999999999999999999999884 899999998641
Q ss_pred -cccccEEEEcCCCCCCcCCHHHHhcCCCCCCccc-CcCCHHHHHHHHHHcCChhH----HhcCCCCcccCCCCCCChhH
Q 001446 247 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGE 320 (1075)
Q Consensus 247 -~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~g~~LSgGq 320 (1075)
.+++.++|+||++.++..|++||+.++....... .....+++.++++.+++.+. .++.+ .+|||||
T Consensus 102 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LS~Gq 173 (272)
T PRK14236 102 AELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKDRLHENA--------FGLSGGQ 173 (272)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHHHhhCCc--------ccCCHHH
Confidence 2356899999999888889999998753211110 11123456778888888542 33332 6899999
Q ss_pred HHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 321 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 321 kqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
|||++|||||+.+|+++||||||++||+.++..+.+.+++ .+.|+|++||+++.+ ..||++++|++
T Consensus 174 ~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~ 242 (272)
T PRK14236 174 QQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYM 242 (272)
T ss_pred HHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEEC
Confidence 9999999999999999999999999999999999888764 378999999999987 47999999986
No 433
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-35 Score=319.94 Aligned_cols=197 Identities=24% Similarity=0.270 Sum_probs=163.1
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCC-----CccEEEeCCcCc--------c
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS--------D 247 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~--------~ 247 (1075)
.++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.+. .
T Consensus 3 ~l~~~~l~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~ 81 (250)
T PRK14262 3 IIEIENFSAYYG-EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTE 81 (250)
T ss_pred eEEEEeeEEEeC-CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHH
Confidence 589999999996 46899999999999999999999999999999999999974 899999998541 2
Q ss_pred ccccEEEEcCCCCCCcCCHHHHhcCCCCCCccc-CcCCHHHHHHHHHHcCChhH----HhcCCCCcccCCCCCCChhHHH
Q 001446 248 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQQ 322 (1075)
Q Consensus 248 ~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~g~~LSgGqkq 322 (1075)
+++.++|+||+|.++..|++||+.++....... ....++.+.++++.+++.+. .++. ..+|||||||
T Consensus 82 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~~LS~Gq~q 153 (250)
T PRK14262 82 YRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKSELNKP--------GTRLSGGQQQ 153 (250)
T ss_pred hhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHHHHhCC--------hhhcCHHHHH
Confidence 356799999999988899999998753211110 11123346677888887542 3333 2689999999
Q ss_pred HHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 323 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 323 Rl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
|++|||||+.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+ ..+|+++++++
T Consensus 154 r~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~ 220 (250)
T PRK14262 154 RLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYR 220 (250)
T ss_pred HHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999888764 378999999999975 57999999986
No 434
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.2e-35 Score=333.83 Aligned_cols=191 Identities=23% Similarity=0.186 Sum_probs=157.0
Q ss_pred ccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccC--C----cCcEEEEcCCCCCCC
Q 001446 849 QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAG--S----GCGIFYVPQRPYTCL 922 (1075)
Q Consensus 849 ~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~--~----r~~i~~VpQdP~Lf~ 922 (1075)
.+++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+. + |.+++||||+|.||+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~ 84 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFP 84 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCC
Confidence 4569999999999999999999999999999999999999999999999999987532 2 568999999999998
Q ss_pred -cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCChhHHHHH
Q 001446 923 -GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSLGEQQRL 1001 (1075)
Q Consensus 923 -gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSgGQrQrl 1001 (1075)
.|+++||.++... .+. .....++.+.++++.++|..+..+. ..+||||||||+
T Consensus 85 ~~TV~eNi~~~~~~----------~~~------~~~~~~~~~~~~l~~vgL~~~~~~~----------p~~LSGGq~QRV 138 (363)
T TIGR01186 85 HMTILQNTSLGPEL----------LGW------PEQERKEKALELLKLVGLEEYEHRY----------PDELSGGMQQRV 138 (363)
T ss_pred CCCHHHHHHHHHHH----------cCC------CHHHHHHHHHHHHHhcCCchhhhCC----------hhhCCHHHHHHH
Confidence 5999999863210 000 0000134456778888886554433 356999999999
Q ss_pred HHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCC-chhhccceEEEEcCC
Q 001446 1002 GMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPA-LIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1002 aiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls-~i~~~~~~l~l~~g~ 1065 (1075)
||||||+++|+|||||||||+||+.+...+++.+.+ .++|+|.|+|+++ ..++.|+++.|.+|.
T Consensus 139 ~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~ 207 (363)
T TIGR01186 139 GLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGE 207 (363)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999888876532 4899999999997 578899999997654
No 435
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-35 Score=322.61 Aligned_cols=198 Identities=22% Similarity=0.262 Sum_probs=163.6
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCC-----CccEEEeCCcCc-------c
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS-------D 247 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~-------~ 247 (1075)
..++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+. .
T Consensus 20 ~~l~i~nl~~~~~-~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 20 PAMAAVNLTLGFA-GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred cEEEEeeEEEEEC-CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 4689999999996 56899999999999999999999999999999999999985 799999998541 2
Q ss_pred ccccEEEEcCCCCCCcCCHHHHhcCCCCCCcc-cCcCCHHHHHHHHHHcCChhH----HhcCCCCcccCCCCCCChhHHH
Q 001446 248 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQQ 322 (1075)
Q Consensus 248 ~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~g~~LSgGqkq 322 (1075)
+++.++|+||+|.+++.|+++|+.++...... ........+.++++.+++... .++. ..+|||||||
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~--------~~~LSgGq~q 170 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLSDS--------PFRLSGGQQQ 170 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhhhHhhCC--------cccCCHHHHH
Confidence 35679999999998889999999875321110 001112234567888888643 2332 2689999999
Q ss_pred HHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 323 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 323 Rl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|++|||||+.+|+++||||||++||+.+.+.+.+.+++. ++|+|++||+++.+. .+|++++|++
T Consensus 171 rl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~ 237 (276)
T PRK14271 171 LLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFD 237 (276)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999998887652 689999999999865 6999999986
No 436
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-35 Score=319.78 Aligned_cols=198 Identities=22% Similarity=0.231 Sum_probs=162.8
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCC-----CccEEEeCCcCc--------
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS-------- 246 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~-------- 246 (1075)
..|+++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+.+| ++|+|.++|.+.
T Consensus 5 ~~i~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 5 IILSTKNLNLWYG-EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred ceEEEeeeEEEEC-CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 3689999999996 46799999999999999999999999999999999999763 489999998541
Q ss_pred cccccEEEEcCCCCCCcCCHHHHhcCCCCCCccc-CcCCHHHHHHHHHHcCChhH----HhcCCCCcccCCCCCCChhHH
Q 001446 247 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQ 321 (1075)
Q Consensus 247 ~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~g~~LSgGqk 321 (1075)
..++.++|+||++.++..|++||+.++....... ....++.+.++++.+++.+. .++. ..+||||||
T Consensus 84 ~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--------~~~LS~G~~ 155 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVKDRLHDS--------ALSLSGGQQ 155 (253)
T ss_pred hhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhHHHhhcC--------hhhCCHHHH
Confidence 2346799999999988889999998764321111 11123456677888877532 2332 368999999
Q ss_pred HHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 322 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 322 qRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
||++||||++.+|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .+|++++|++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~ 223 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYL 223 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEEC
Confidence 999999999999999999999999999999999888764 3689999999999885 6999999986
No 437
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.6e-35 Score=318.43 Aligned_cols=185 Identities=25% Similarity=0.307 Sum_probs=152.9
Q ss_pred CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----ccccccEEEEc-CCCCCC-cCCH
Q 001446 194 GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYVP-QRPYTA-VGTL 266 (1075)
Q Consensus 194 ~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~~~~~~i~~v~-Q~~~~~-~~tv 266 (1075)
++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...+++++|++ |++.++ ..|+
T Consensus 33 ~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 33 EVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEccccchhhcccEEEEcCCccccCCCCcH
Confidence 4579999999999999999999999999999999999999999999998854 12456799998 556665 4699
Q ss_pred HHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCC
Q 001446 267 RDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAV 346 (1075)
Q Consensus 267 ~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~illLDEpts~L 346 (1075)
+||+.+.............+++.++++.+++.+..++.+ ..||||||||++|||||+.+|+++||||||++|
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~~qrl~la~al~~~p~llllDEPt~~L 184 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKRLDELSELLDLEELLDTPV--------RQLSLGQRMRAEIAAALLHEPEILFLDEPTIGL 184 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhcCCh--------hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCC
Confidence 999976432111111112234567888899987777654 689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 347 TTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 347 D~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|+.+.+.+.+.+++ .+.|+|++||+++.+. .+|++++|++
T Consensus 185 D~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~ 229 (236)
T cd03267 185 DVVAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDK 229 (236)
T ss_pred CHHHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeC
Confidence 99999999988764 2789999999999874 6999999975
No 438
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.7e-36 Score=330.13 Aligned_cols=206 Identities=18% Similarity=0.163 Sum_probs=162.3
Q ss_pred CCceEEeeeeeeCCCc----cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcc------
Q 001446 834 QDSISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDE------ 903 (1075)
Q Consensus 834 ~g~I~f~~V~~~yp~~----~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~------ 903 (1075)
.+.|+++||+++|++. .++|+|+||+|++||.+||+||||||||||+++|.|+++|.+|+|.++|.++..
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 4789999999999754 259999999999999999999999999999999999999999999999988742
Q ss_pred -ccCCcCcEEEEcCCC--CCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCch-hhhhhh
Q 001446 904 -EAGSGCGIFYVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS-YLLERE 979 (1075)
Q Consensus 904 -~~~~r~~i~~VpQdP--~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~-~~i~~~ 979 (1075)
...+|.+++||||+| .+|..|+++|+.++.... +. ......+.+.++++.++|. .....
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~----------~~------~~~~~~~~~~~ll~~~~L~~~~~~~- 146 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL----------GE------NKQEAYKKVPELLKLVQLPEDYVKR- 146 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc----------CC------CHHHHHHHHHHHHHHcCCChhHhcC-
Confidence 123456799999998 477889999997532100 00 0000112344556666652 22111
Q ss_pred ccCCccccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCc-hhh
Q 001446 980 EVGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPAL-IPF 1054 (1075)
Q Consensus 980 ~~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~-i~~ 1054 (1075)
....||||||||++|||||+++|++|||||||++||.++...+.+.+++ .++|+|+|+|+++. .++
T Consensus 147 ---------~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~ 217 (289)
T PRK13645 147 ---------SPFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRI 217 (289)
T ss_pred ---------ChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHh
Confidence 1356999999999999999999999999999999999999887776543 38999999999985 578
Q ss_pred ccceEEEEcCC
Q 001446 1055 HSLELRLIDGE 1065 (1075)
Q Consensus 1055 ~~~~l~l~~g~ 1065 (1075)
.|+++.+.+|.
T Consensus 218 ~d~i~~l~~G~ 228 (289)
T PRK13645 218 ADEVIVMHEGK 228 (289)
T ss_pred CCEEEEEECCE
Confidence 99999997764
No 439
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-35 Score=320.09 Aligned_cols=199 Identities=23% Similarity=0.291 Sum_probs=163.2
Q ss_pred CCccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCC-----CccEEEeCCcCc------
Q 001446 178 EANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS------ 246 (1075)
Q Consensus 178 ~~~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~------ 246 (1075)
+...|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+.
T Consensus 17 ~~~~l~~~nl~~~~~-~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 17 DHSVFEVEGVKVFYG-GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred CCceEEEeeEEEEeC-CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 345799999999996 45799999999999999999999999999999999999863 699999998541
Q ss_pred --cccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChh----HHhcCCCCcccCCCCCCChhH
Q 001446 247 --DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGE 320 (1075)
Q Consensus 247 --~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGq 320 (1075)
.+++.++|+||++.++..|+.+|+.++...... ....++.+.++++.+++.. ..++. ..+|||||
T Consensus 96 ~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~l~~~~~~~--------~~~LSgGq 166 (274)
T PRK14265 96 SVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGY-KGNLDELVEDSLRRAAIWEEVKDKLKEK--------GTALSGGQ 166 (274)
T ss_pred hHHHhhcEEEEccCCccccccHHHHHHhHHHhcCc-hHHHHHHHHHHHHHcccchhhHHHhcCC--------cccCCHHH
Confidence 235689999999988878999999875321110 0112234566777877743 23333 26899999
Q ss_pred HHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 321 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 321 kqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
|||++|||||+.+|+++||||||++||+.+...+.+.+++. +.|+|++||+++.+ ..||++++|++
T Consensus 167 ~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 235 (274)
T PRK14265 167 QQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNT 235 (274)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEec
Confidence 99999999999999999999999999999999999988653 68999999999887 47999999973
No 440
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-35 Score=324.27 Aligned_cols=211 Identities=19% Similarity=0.185 Sum_probs=165.6
Q ss_pred CCceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCC-----CCCeEecCCCCCccc----
Q 001446 834 QDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPV-----VSGSLTKPSQHIDEE---- 904 (1075)
Q Consensus 834 ~g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~-----~sG~I~idg~di~~~---- 904 (1075)
.+.|+++||++.|++ .++|+|+||+|+|||.++|+|+||||||||+++|.|+++| .+|+|.+||.++...
T Consensus 17 ~~~l~~~nl~~~~~~-~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~ 95 (267)
T PRK14235 17 EIKMRARDVSVFYGE-KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDV 95 (267)
T ss_pred CceEEEEeEEEEECC-EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccch
Confidence 467999999999974 5799999999999999999999999999999999999975 899999999988642
Q ss_pred cCCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCc
Q 001446 905 AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWD 984 (1075)
Q Consensus 905 ~~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gld 984 (1075)
...|.+++||||+|.+|.+|+++|+.++..... .. . .....++.+.++++.+++...+... ++
T Consensus 96 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~----------~~---~-~~~~~~~~~~~~l~~~~l~~~~~~~---~~ 158 (267)
T PRK14235 96 VELRARVGMVFQKPNPFPKSIYENVAYGPRIHG----------LA---R-SKAELDEIVETSLRKAGLWEEVKDR---LH 158 (267)
T ss_pred HHHhhceEEEecCCCCCCCcHHHHHHHHHHhcc----------cc---c-chHHHHHHHHHHHHHcCCchhhhHH---hh
Confidence 234567999999999999999999975321000 00 0 0000123455667777764322100 11
Q ss_pred cccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCch-hhccceEEE
Q 001446 985 ANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRL 1061 (1075)
Q Consensus 985 t~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i-~~~~~~l~l 1061 (1075)
. ....||||||||++|||||+.+|++|||||||++||..+...+.+.+++ .+.|+|+|+|+++.+ .+.|+++.|
T Consensus 159 ~---~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l 235 (267)
T PRK14235 159 E---PGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFF 235 (267)
T ss_pred C---CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEE
Confidence 1 1356999999999999999999999999999999999999888777654 368999999999876 678999999
Q ss_pred EcCC
Q 001446 1062 IDGE 1065 (1075)
Q Consensus 1062 ~~g~ 1065 (1075)
.+|.
T Consensus 236 ~~G~ 239 (267)
T PRK14235 236 HLGN 239 (267)
T ss_pred ECCE
Confidence 7664
No 441
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-35 Score=325.05 Aligned_cols=201 Identities=22% Similarity=0.201 Sum_probs=160.5
Q ss_pred EEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccC------CcCcE
Q 001446 838 SFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAG------SGCGI 911 (1075)
Q Consensus 838 ~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~------~r~~i 911 (1075)
.++||+..|. ..++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++...+. .+.++
T Consensus 26 ~~~~~~~~~~-~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i 104 (269)
T cd03294 26 SKEEILKKTG-QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKI 104 (269)
T ss_pred hhhhhhhhcC-CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcE
Confidence 4667777775 3568999999999999999999999999999999999999999999999998876421 23579
Q ss_pred EEEcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccc
Q 001446 912 FYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 990 (1075)
Q Consensus 912 ~~VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 990 (1075)
+|+||+|.+|. .|+++|+.++.... +. .....++.+.++++.++|.+..... .
T Consensus 105 ~~v~q~~~~~~~~tv~e~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~ 158 (269)
T cd03294 105 SMVFQSFALLPHRTVLENVAFGLEVQ----------GV------PRAEREERAAEALELVGLEGWEHKY----------P 158 (269)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHhc----------CC------CHHHHHHHHHHHHHHcCCHhHhhCC----------c
Confidence 99999999985 69999997532100 00 0000123456677788775544333 2
Q ss_pred cCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 991 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 991 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
..||||||||++|||||+++|+||||||||++||..+...+.+.+++ .|+|+|+++|+++.+ ++.|+++.|.+|.
T Consensus 159 ~~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~ 238 (269)
T cd03294 159 DELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGR 238 (269)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 46999999999999999999999999999999999999888776643 379999999999864 7899999997664
No 442
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=325.75 Aligned_cols=204 Identities=19% Similarity=0.221 Sum_probs=167.0
Q ss_pred ceEEeeeeeeCCC-----ccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc---cCC
Q 001446 836 SISFSKLDIITPS-----QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE---AGS 907 (1075)
Q Consensus 836 ~I~f~~V~~~yp~-----~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~---~~~ 907 (1075)
-|+++||++.|++ .+++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++... ...
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 4899999999974 25799999999999999999999999999999999999999999999999988653 234
Q ss_pred cCcEEEEcCCCC--CCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcc
Q 001446 908 GCGIFYVPQRPY--TCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 985 (1075)
Q Consensus 908 r~~i~~VpQdP~--Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt 985 (1075)
|.+++||||+|. +|.-|+.+|+.++.... +. .....++.+.++++.++|.+...+.
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~gL~~~~~~~------ 141 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENL----------GI------PPEEIRERVDESLKKVGMYEYRRHA------ 141 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhc----------CC------CHHHHHHHHHHHHHHCCCHhHhhCC------
Confidence 667999999994 67678999997642100 00 0001134466777888886555443
Q ss_pred ccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCchhhccceEEE
Q 001446 986 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRL 1061 (1075)
Q Consensus 986 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i~~~~~~l~l 1061 (1075)
...||||||||++|||||+++|++|||||||++||..+...+.+.+++ .++|+|+|+|+++.+...|+++.|
T Consensus 142 ----~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l 217 (280)
T PRK13633 142 ----PHLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVM 217 (280)
T ss_pred ----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEE
Confidence 246999999999999999999999999999999999999888776643 389999999999988889999999
Q ss_pred EcCC
Q 001446 1062 IDGE 1065 (1075)
Q Consensus 1062 ~~g~ 1065 (1075)
.+|.
T Consensus 218 ~~G~ 221 (280)
T PRK13633 218 DSGK 221 (280)
T ss_pred ECCE
Confidence 7765
No 443
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.6e-35 Score=328.46 Aligned_cols=203 Identities=24% Similarity=0.297 Sum_probs=162.0
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc-cCCcCcEEEE
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYV 914 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~-~~~r~~i~~V 914 (1075)
.|+++||++.|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++... ...|.+++|+
T Consensus 4 ~i~~~~l~~~~~~-~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~v 82 (303)
T TIGR01288 4 AIDLVGVSKSYGD-KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAIGVV 82 (303)
T ss_pred EEEEEeEEEEeCC-eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcEEEE
Confidence 4899999999964 5699999999999999999999999999999999999999999999999987643 2346679999
Q ss_pred cCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCC
Q 001446 915 PQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDIL 993 (1075)
Q Consensus 915 pQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~L 993 (1075)
||+|.+|. .|+++|+.+.... .+.. .......+.++++.++|.+.. +.. ...|
T Consensus 83 ~q~~~~~~~~tv~e~l~~~~~~----------~~~~------~~~~~~~~~~ll~~~~l~~~~-------~~~---~~~L 136 (303)
T TIGR01288 83 PQFDNLDPEFTVRENLLVFGRY----------FGMS------TREIEAVIPSLLEFARLESKA-------DVR---VALL 136 (303)
T ss_pred eccccCCcCCcHHHHHHHHHHH----------cCCC------HHHHHHHHHHHHHHCCChhHh-------cCc---hhhC
Confidence 99999885 6999999641100 0000 000012334566666664332 222 2469
Q ss_pred ChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 994 SLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 994 SgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
|||||||++|||||+++|++|||||||++||+.+...+.+.+++ .|+|+|+++|+++.+ +++|+++.|.+|.
T Consensus 137 SgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~ 212 (303)
T TIGR01288 137 SGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGR 212 (303)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999888776643 489999999999866 6899999997664
No 444
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.8e-36 Score=301.34 Aligned_cols=197 Identities=28% Similarity=0.393 Sum_probs=168.4
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc-------cccccEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIF 253 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~-------~~~~~i~ 253 (1075)
.++++++++++ ++-.+++|+||++++||+++|+||||+|||||+++|.|+++|++|+|.++|.+- -.+..|+
T Consensus 4 lL~v~~l~k~F-GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi~ 82 (250)
T COG0411 4 LLEVRGLSKRF-GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGIA 82 (250)
T ss_pred eeeeccceeec-CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccce
Confidence 47899999998 467899999999999999999999999999999999999999999999999751 1245688
Q ss_pred EEcCCCCCCcC-CHHHHhcCCCCCC------------cccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhH
Q 001446 254 YVPQRPYTAVG-TLRDQLIYPLTSD------------QEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGE 320 (1075)
Q Consensus 254 ~v~Q~~~~~~~-tv~~ni~~~~~~~------------~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGq 320 (1075)
--||.+-+|.. ||.||+..+.... ........++..++|+.+||.+..+... .+||+||
T Consensus 83 RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A--------~~LsyG~ 154 (250)
T COG0411 83 RTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPA--------GNLSYGQ 154 (250)
T ss_pred eecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchh--------hcCChhH
Confidence 99999988775 9999998763211 0011223456778999999999888754 6899999
Q ss_pred HHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 321 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 321 kqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
|+|+.|||||+.+|++|+||||.+||.+....++.+.+++ .|.|+++|-||++.+ ..||||++|+.
T Consensus 155 qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~ 225 (250)
T COG0411 155 QRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNY 225 (250)
T ss_pred hHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccC
Confidence 9999999999999999999999999999999888877653 369999999999987 57999999986
No 445
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-35 Score=323.20 Aligned_cols=207 Identities=24% Similarity=0.294 Sum_probs=165.3
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEE
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFY 913 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~ 913 (1075)
.|+++||++.|++ +++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.++|.++... ..+|..++|
T Consensus 11 ~l~i~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 89 (265)
T PRK10575 11 TFALRNVSFRVPG-RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAY 89 (265)
T ss_pred eEEEeeEEEEECC-EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheEE
Confidence 5899999999974 5799999999999999999999999999999999999999999999999988654 234567999
Q ss_pred EcCCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccC
Q 001446 914 VPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 992 (1075)
Q Consensus 914 VpQdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~ 992 (1075)
+||+|.++.+ |+++|+.++...... .. + ......++.+.++++.+++.+..... ...
T Consensus 90 v~q~~~~~~~~tv~e~l~~~~~~~~~---~~---~------~~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~ 147 (265)
T PRK10575 90 LPQQLPAAEGMTVRELVAIGRYPWHG---AL---G------RFGAADREKVEEAISLVGLKPLAHRL----------VDS 147 (265)
T ss_pred eccCCCCCCCccHHHHHHhCcccccc---cc---c------CCCHHHHHHHHHHHHHcCCHHHhcCC----------ccc
Confidence 9999877665 999999864310000 00 0 00001134466777888775443322 246
Q ss_pred CChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 993 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 993 LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
||||||||++||||++.+|+||||||||++||..+...+.+.+++ .++|+|+|+|+++.+ ++.|+++.|.+|.
T Consensus 148 LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~ 225 (265)
T PRK10575 148 LSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGE 225 (265)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 999999999999999999999999999999999998877776543 389999999999876 6899999997664
No 446
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-35 Score=322.48 Aligned_cols=208 Identities=18% Similarity=0.207 Sum_probs=162.9
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCC-----CCCCeEecCCCCCccc----cC
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP-----VVSGSLTKPSQHIDEE----AG 906 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~-----~~sG~I~idg~di~~~----~~ 906 (1075)
.|+++||+++|++ +++|+|+||+|++||.++|+|+||||||||+++|.|+++ |++|+|.+||.++... ..
T Consensus 6 ~l~~~~l~~~~~~-~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 84 (253)
T PRK14242 6 KMEARGLSFFYGD-FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVE 84 (253)
T ss_pred EEEEeeeEEEECC-eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHH
Confidence 5899999999964 569999999999999999999999999999999999975 5899999999988642 13
Q ss_pred CcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccc
Q 001446 907 SGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 986 (1075)
Q Consensus 907 ~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~ 986 (1075)
.|.+++||||+|.+|++|+++|+.++... .+.. .....++.+.++++.+++...+... ++
T Consensus 85 ~~~~i~~v~q~~~~~~~tv~enl~~~~~~----------~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~---~~-- 144 (253)
T PRK14242 85 LRRRVGMVFQKPNPFPKSIFENVAYGLRV----------NGVK-----DKAYLAERVERSLRHAALWDEVKDR---LH-- 144 (253)
T ss_pred HhhcEEEEecCCCCCcCcHHHHHHHHHHH----------cCCC-----CHHHHHHHHHHHHHHcCCchhhhHH---hh--
Confidence 45679999999999999999999753210 0000 0000123445566666663321110 01
Q ss_pred cccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCch-hhccceEEEEc
Q 001446 987 LNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLID 1063 (1075)
Q Consensus 987 ~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i-~~~~~~l~l~~ 1063 (1075)
.....||||||||++||||++++|+||||||||++||..+...+.+.+++ .++|||+|+|+++.+ ++.|+++.|.+
T Consensus 145 -~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~ 223 (253)
T PRK14242 145 -ESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYM 223 (253)
T ss_pred -CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEEC
Confidence 12356999999999999999999999999999999999999888777654 478999999999866 78999999977
Q ss_pred CC
Q 001446 1064 GE 1065 (1075)
Q Consensus 1064 g~ 1065 (1075)
|.
T Consensus 224 G~ 225 (253)
T PRK14242 224 GK 225 (253)
T ss_pred CE
Confidence 64
No 447
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-35 Score=320.27 Aligned_cols=198 Identities=22% Similarity=0.248 Sum_probs=162.9
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCC-----CccEEEeCCcCc--------
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS-------- 246 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~-------- 246 (1075)
..++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.+.
T Consensus 6 ~~l~~~~l~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (259)
T PRK14260 6 PAIKVKDLSFYYN-TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININ 84 (259)
T ss_pred ceEEEEEEEEEEC-CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchH
Confidence 3689999999985 46799999999999999999999999999999999999985 489999998641
Q ss_pred cccccEEEEcCCCCCCcCCHHHHhcCCCCCCcc-cCcCCHHHHHHHHHHcCChh----HHhcCCCCcccCCCCCCChhHH
Q 001446 247 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQ 321 (1075)
Q Consensus 247 ~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGqk 321 (1075)
.+++.++|+||++.++..|++||+.++...... .....++.+.++++.+++.+ ..++. ...||||||
T Consensus 85 ~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--------~~~LS~G~~ 156 (259)
T PRK14260 85 RLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDKLNKS--------ALGLSGGQQ 156 (259)
T ss_pred hhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhHhcCC--------cccCCHHHH
Confidence 234579999999998889999999865321110 01112344667888888853 33333 368999999
Q ss_pred HHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 322 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 322 qRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
||++|||||+.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+. .||++++|+.
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~ 224 (259)
T PRK14260 157 QRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFST 224 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEec
Confidence 999999999999999999999999999999999888764 3689999999999875 6999999973
No 448
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-35 Score=317.51 Aligned_cols=202 Identities=21% Similarity=0.280 Sum_probs=165.1
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEcC
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 916 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~VpQ 916 (1075)
|+++|+++.|++ +++|+|+||+|+|||+++|+|+||||||||+++|.|+++|.+|+|.+||.++......+..++++||
T Consensus 1 l~~~~l~~~~~~-~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 79 (232)
T cd03300 1 IELENVSKFYGG-FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPPHKRPVNTVFQ 79 (232)
T ss_pred CEEEeEEEEeCC-eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcceEEEec
Confidence 578999999975 5799999999999999999999999999999999999999999999999988766444567999999
Q ss_pred CCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCCh
Q 001446 917 RPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 995 (1075)
Q Consensus 917 dP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 995 (1075)
+|.+|.+ |+++|+.++.... +. .+...+..+.++++.+++.....+. ...||+
T Consensus 80 ~~~~~~~~t~~~nl~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~lS~ 133 (232)
T cd03300 80 NYALFPHLTVFENIAFGLRLK----------KL------PKAEIKERVAEALDLVQLEGYANRK----------PSQLSG 133 (232)
T ss_pred ccccCCCCcHHHHHHHHHHhc----------CC------CHHHHHHHHHHHHHHcCCchhhcCC----------hhhCCH
Confidence 9999976 9999997532100 00 0001123455667777775544333 246899
Q ss_pred hHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCc-hhhccceEEEEcCC
Q 001446 996 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPAL-IPFHSLELRLIDGE 1065 (1075)
Q Consensus 996 GQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~-i~~~~~~l~l~~g~ 1065 (1075)
|||||++||||++++|+++||||||++||..+...+.+.+++ .++|+|+++|++.. .++.|+++.+.+|.
T Consensus 134 G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~ 208 (232)
T cd03300 134 GQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGK 208 (232)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 999999999999999999999999999999999888777643 38999999999986 46789999997664
No 449
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-35 Score=301.74 Aligned_cols=166 Identities=26% Similarity=0.386 Sum_probs=147.1
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc-cCCcCcEEEEc
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYVP 915 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~-~~~r~~i~~Vp 915 (1075)
++++||++.|++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|.+|+|.+||.++... ...|.+++|+|
T Consensus 1 l~~~~l~~~~~~-~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (173)
T cd03230 1 IEVRNLSKRYGK-KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEPEEVKRRIGYLP 79 (173)
T ss_pred CEEEEEEEEECC-eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccchHhhhccEEEEe
Confidence 478999999875 4699999999999999999999999999999999999999999999999988654 23456799999
Q ss_pred CCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCC
Q 001446 916 QRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 994 (1075)
Q Consensus 916 QdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 994 (1075)
|+|.+|.+ |+++|+. ||
T Consensus 80 q~~~~~~~~tv~~~~~--------------------------------------------------------------LS 97 (173)
T cd03230 80 EEPSLYENLTVRENLK--------------------------------------------------------------LS 97 (173)
T ss_pred cCCccccCCcHHHHhh--------------------------------------------------------------cC
Confidence 99998876 8887762 49
Q ss_pred hhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCchh-hccceEEEEcCC
Q 001446 995 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIP-FHSLELRLIDGE 1065 (1075)
Q Consensus 995 gGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i~-~~~~~l~l~~g~ 1065 (1075)
+|||||++||||++++|+++||||||++||..+...+.+.+++ .+.|+|+|+|+.+.+. +.|+++.+.+|.
T Consensus 98 ~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~ 172 (173)
T cd03230 98 GGMKQRLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGR 172 (173)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCC
Confidence 9999999999999999999999999999999999888776643 4789999999998665 899999997663
No 450
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.5e-35 Score=317.15 Aligned_cols=203 Identities=20% Similarity=0.268 Sum_probs=160.5
Q ss_pred eEEeeeeeeCCCc---cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCC---CCCCeEecCCCCCccccCCcCc
Q 001446 837 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP---VVSGSLTKPSQHIDEEAGSGCG 910 (1075)
Q Consensus 837 I~f~~V~~~yp~~---~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~---~~sG~I~idg~di~~~~~~r~~ 910 (1075)
+.|+||+++||+. +++|+|+||+|++||.++|+||||||||||+++|.|+++ |++|+|.++|.++... ..|.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~-~~~~~ 82 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPD-QFQKC 82 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChH-Hhccc
Confidence 5799999999874 689999999999999999999999999999999999999 9999999999987642 34567
Q ss_pred EEEEcCCCCCCCc-chhhhhcCCCChH--HHHHHHhhhcCCCcccccccccchHHHHH-HHHhCCchhhhhhhccCCccc
Q 001446 911 IFYVPQRPYTCLG-TLRDQIIYPLSRE--EAELRALKLHGKGEKLVDTTNILDSYLKT-ILEGVRLSYLLEREEVGWDAN 986 (1075)
Q Consensus 911 i~~VpQdP~Lf~g-Tir~NL~~p~~~~--~~~~~a~~~~~~~~~~~~~~~~~d~~i~~-~l~~~~L~~~i~~~~~Gldt~ 986 (1075)
++|+||+|.+|++ |+++|+.++.... ....++ ..+..+.+ .++.+++.+..+.
T Consensus 83 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~---------------~~~~~~~~~~l~~~~l~~~~~~-------- 139 (226)
T cd03234 83 VAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDA---------------IRKKRVEDVLLRDLALTRIGGN-------- 139 (226)
T ss_pred EEEeCCCCccCcCCcHHHHHHHHHHhhcccccchH---------------HHHHHHHHHHHHhhcchhhhcc--------
Confidence 9999999999987 9999997531100 000000 00111222 4555554322211
Q ss_pred cccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCC--CchhhccceEEE
Q 001446 987 LNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRP--ALIPFHSLELRL 1061 (1075)
Q Consensus 987 ~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRl--s~i~~~~~~l~l 1061 (1075)
....||+|||||++||||++++|+||||||||++||..+...+.+.+++ .+.|+|+++|++ ...++.|+++.|
T Consensus 140 --~~~~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l 217 (226)
T cd03234 140 --LVKGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLL 217 (226)
T ss_pred --cccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEE
Confidence 1356999999999999999999999999999999999999888777643 478999999998 477899999999
Q ss_pred EcCC
Q 001446 1062 IDGE 1065 (1075)
Q Consensus 1062 ~~g~ 1065 (1075)
.+|.
T Consensus 218 ~~G~ 221 (226)
T cd03234 218 SSGE 221 (226)
T ss_pred eCCE
Confidence 7653
No 451
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.1e-35 Score=319.42 Aligned_cols=199 Identities=25% Similarity=0.346 Sum_probs=157.2
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccC---CcCcEEE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAG---SGCGIFY 913 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~---~r~~i~~ 913 (1075)
|+++||++.|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|.+|+|.+||.++...+. .+.+++|
T Consensus 1 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (230)
T TIGR03410 1 LEVSNLNVYYGQ-SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIAY 79 (230)
T ss_pred CEEEeEEEEeCC-eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeEE
Confidence 578999999975 579999999999999999999999999999999999999999999999998876521 2457999
Q ss_pred EcCCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCC-chhhhhhhccCCcccccccc
Q 001446 914 VPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVR-LSYLLEREEVGWDANLNWED 991 (1075)
Q Consensus 914 VpQdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~-L~~~i~~~~~Gldt~~~~g~ 991 (1075)
+||+|.+|.+ |+++|+.++....... ..+...++++.++ +.... +. ...
T Consensus 80 ~~q~~~~~~~~tv~~~l~~~~~~~~~~-------------------~~~~~~~~l~~~~~l~~~~-------~~---~~~ 130 (230)
T TIGR03410 80 VPQGREIFPRLTVEENLLTGLAALPRR-------------------SRKIPDEIYELFPVLKEML-------GR---RGG 130 (230)
T ss_pred eccCCcccCCCcHHHHHHHHHHhcCcc-------------------hHHHHHHHHHHHHhHHHHh-------hC---Chh
Confidence 9999999986 9999997532100000 0011122333322 11111 11 234
Q ss_pred CCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCchh-hccceEEEEcCC
Q 001446 992 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIP-FHSLELRLIDGE 1065 (1075)
Q Consensus 992 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i~-~~~~~l~l~~g~ 1065 (1075)
.||||||||++||||++++|+++||||||++||..+...+.+.+.+ .++|+|+|+|+++.+. +.|+++.+.+|.
T Consensus 131 ~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~ 209 (230)
T TIGR03410 131 DLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGR 209 (230)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999888777643 3799999999998765 799999997654
No 452
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=2.9e-34 Score=308.99 Aligned_cols=180 Identities=27% Similarity=0.343 Sum_probs=131.7
Q ss_pred EEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCc-C--------cc------------
Q 001446 189 VVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGV-G--------SD------------ 247 (1075)
Q Consensus 189 ~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~-~--------~~------------ 247 (1075)
..|..+...|..+- ..++|++++|+||||-||||-+|+|+|.+.|.=|+-.-+.. + .+
T Consensus 82 HRYg~NgFkL~~LP-~pr~G~V~GilG~NGiGKsTalkILaGel~PNLG~~~~pp~wdeVi~~FrGtELq~YF~~l~~g~ 160 (591)
T COG1245 82 HRYGVNGFKLYRLP-TPRPGKVVGILGPNGIGKSTALKILAGELKPNLGRYEDPPSWDEVIKRFRGTELQNYFKKLYEGE 160 (591)
T ss_pred eeccCCceEEecCC-CCCCCcEEEEEcCCCccHHHHHHHHhCccccCCCCCCCCCCHHHHHHHhhhhHHHHHHHHHHcCC
Confidence 34533333333332 35789999999999999999999999999998886532110 0 00
Q ss_pred c--cccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHH
Q 001446 248 L--NKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLG 325 (1075)
Q Consensus 248 ~--~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~ 325 (1075)
+ -.++-||---|-.+.|+|+|-+.-... .....++.+.++|...+++.. .+|||||-||+|
T Consensus 161 ~r~v~K~QYVd~iPk~~KG~v~elLk~~de---------~g~~devve~l~L~nvl~r~v--------~~LSGGELQr~a 223 (591)
T COG1245 161 LRAVHKPQYVDLIPKVVKGKVGELLKKVDE---------RGKFDEVVERLGLENVLDRDV--------SELSGGELQRVA 223 (591)
T ss_pred cceecchHHHHHHHHHhcchHHHHHHhhhh---------cCcHHHHHHHhcchhhhhhhh--------hhcCchHHHHHH
Confidence 0 012333333455567888887653211 124668889999999988865 689999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHhh-CCeEEEEcC
Q 001446 326 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAF-HDVVLSLDG 386 (1075)
Q Consensus 326 lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~~-~d~i~~l~~ 386 (1075)
||.++.++++++++|||+|-||...+-.+.+.+++ .+++||+|-||+..+.+ +|.|.++-+
T Consensus 224 Iaa~l~rdADvY~FDEpsSyLDi~qRl~~ar~Irel~~~~k~ViVVEHDLavLD~lsD~vhI~YG 288 (591)
T COG1245 224 IAAALLRDADVYFFDEPSSYLDIRQRLNAARVIRELAEDGKYVIVVEHDLAVLDYLSDFVHILYG 288 (591)
T ss_pred HHHHHhccCCEEEEcCCcccccHHHHHHHHHHHHHHhccCCeEEEEechHHHHHHhhheeEEEec
Confidence 99999999999999999999999877666555543 47999999999999875 788777754
No 453
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=326.06 Aligned_cols=201 Identities=22% Similarity=0.273 Sum_probs=165.2
Q ss_pred ceEEeeeeeeCCC--ccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcE
Q 001446 836 SISFSKLDIITPS--QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGI 911 (1075)
Q Consensus 836 ~I~f~~V~~~yp~--~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i 911 (1075)
-|+++||++.|++ ..++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++... ...|.++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 4899999999974 24699999999999999999999999999999999999999999999999988754 2345679
Q ss_pred EEEcCCC--CCCCcchhhhhcCCCC---hHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccc
Q 001446 912 FYVPQRP--YTCLGTLRDQIIYPLS---REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 986 (1075)
Q Consensus 912 ~~VpQdP--~Lf~gTir~NL~~p~~---~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~ 986 (1075)
+||||+| .++..|+.+||.++.. ...+. ..+.+.++++.++|.++....
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~-------------------~~~~~~~~l~~~~l~~~~~~~------- 137 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREE-------------------MIKRVDEALLAVNMLDFKTRE------- 137 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHH-------------------HHHHHHHHHHHCCCHhHhhCC-------
Confidence 9999998 4678899999976421 00000 012345667777775443322
Q ss_pred cccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCchhhccceEEEE
Q 001446 987 LNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRLI 1062 (1075)
Q Consensus 987 ~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i~~~~~~l~l~ 1062 (1075)
...||||||||++|||||+++|+||||||||++||..+...+.+.+++ .|+|+|+|+|++..+...|+++.|.
T Consensus 138 ---~~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~ 214 (277)
T PRK13642 138 ---PARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMK 214 (277)
T ss_pred ---cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEE
Confidence 346999999999999999999999999999999999999888776542 3899999999999888899999997
Q ss_pred cCC
Q 001446 1063 DGE 1065 (1075)
Q Consensus 1063 ~g~ 1065 (1075)
+|.
T Consensus 215 ~G~ 217 (277)
T PRK13642 215 AGE 217 (277)
T ss_pred CCE
Confidence 664
No 454
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=319.61 Aligned_cols=200 Identities=20% Similarity=0.246 Sum_probs=160.0
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc---CCcCcEE
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIF 912 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~---~~r~~i~ 912 (1075)
-|+++||++.|++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.++|.++...+ ..+.+++
T Consensus 5 ~l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 83 (237)
T PRK11614 5 MLSFDKVSAHYGK-IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAVA 83 (237)
T ss_pred EEEEEeEEEeeCC-ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCEE
Confidence 4899999999864 57999999999999999999999999999999999999999999999999887653 2456799
Q ss_pred EEcCCCCCCCc-chhhhhcCCCC-hHHHHHHHhhhcCCCcccccccccchHHHHHHHHhC-CchhhhhhhccCCcccccc
Q 001446 913 YVPQRPYTCLG-TLRDQIIYPLS-REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGV-RLSYLLEREEVGWDANLNW 989 (1075)
Q Consensus 913 ~VpQdP~Lf~g-Tir~NL~~p~~-~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~-~L~~~i~~~~~Gldt~~~~ 989 (1075)
|+||+|.+|.+ |+++|+.++.. ..... .+..+.++++.+ ++.+.. + ..
T Consensus 84 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~-------------------~~~~~~~~l~~~~~l~~~~-------~---~~ 134 (237)
T PRK11614 84 IVPEGRRVFSRMTVEENLAMGGFFAERDQ-------------------FQERIKWVYELFPRLHERR-------I---QR 134 (237)
T ss_pred EeccCcccCCCCcHHHHHHHhhhccChhH-------------------HHHHHHHHHHHHHHHHHHH-------h---Cc
Confidence 99999999985 99999986321 00000 011223333333 122111 1 12
Q ss_pred ccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCC-chhhccceEEEEcCC
Q 001446 990 EDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPA-LIPFHSLELRLIDGE 1065 (1075)
Q Consensus 990 g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls-~i~~~~~~l~l~~g~ 1065 (1075)
...||||||||++||||++++|+||||||||++||.++...+.+.+++ .++|+|+++|+++ ..++.|+++.|.+|.
T Consensus 135 ~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 214 (237)
T PRK11614 135 AGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGH 214 (237)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCE
Confidence 356999999999999999999999999999999999998887776643 4899999999997 678999999997664
No 455
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-35 Score=319.46 Aligned_cols=203 Identities=19% Similarity=0.312 Sum_probs=162.5
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc---CCcCcEEE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIFY 913 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~---~~r~~i~~ 913 (1075)
|+++||++.|++ +++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++...+ ..|.+++|
T Consensus 4 l~~~~l~~~~~~-~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 82 (241)
T PRK10895 4 LTAKNLAKAYKG-RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIGY 82 (241)
T ss_pred EEEeCcEEEeCC-EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCeEE
Confidence 789999999974 57999999999999999999999999999999999999999999999999887653 23567999
Q ss_pred EcCCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccC
Q 001446 914 VPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 992 (1075)
Q Consensus 914 VpQdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~ 992 (1075)
+||+|.+|.+ |+++|+.++...... . .....+..+.++++.+++...... ....
T Consensus 83 ~~q~~~~~~~~tv~enl~~~~~~~~~-------------~--~~~~~~~~~~~~l~~~~l~~~~~~----------~~~~ 137 (241)
T PRK10895 83 LPQEASIFRRLSVYDNLMAVLQIRDD-------------L--SAEQREDRANELMEEFHIEHLRDS----------MGQS 137 (241)
T ss_pred eccCCcccccCcHHHHHhhhhhcccc-------------c--CHHHHHHHHHHHHHHcCCHHHhhc----------chhh
Confidence 9999999885 999999754210000 0 000112345566677666433221 1356
Q ss_pred CChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCC-chhhccceEEEEcCC
Q 001446 993 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPA-LIPFHSLELRLIDGE 1065 (1075)
Q Consensus 993 LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls-~i~~~~~~l~l~~g~ 1065 (1075)
||||||||++||||++++|++|||||||++||.++...+.+.+++ .++|+|+++|++. ..++.|+++.|.+|.
T Consensus 138 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~ 214 (241)
T PRK10895 138 LSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGH 214 (241)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCe
Confidence 999999999999999999999999999999999998877665532 5899999999995 668899999997654
No 456
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=326.00 Aligned_cols=204 Identities=24% Similarity=0.276 Sum_probs=162.8
Q ss_pred ceEEeeeeeeCCCc----cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc------c
Q 001446 836 SISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE------A 905 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~----~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~------~ 905 (1075)
.|+++||+++|++. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... .
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 37899999999742 4799999999999999999999999999999999999999999999999988542 1
Q ss_pred CCcCcEEEEcCCC--CCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCch-hhhhhhccC
Q 001446 906 GSGCGIFYVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS-YLLEREEVG 982 (1075)
Q Consensus 906 ~~r~~i~~VpQdP--~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~-~~i~~~~~G 982 (1075)
..+.+++|+||+| .+|..|+++||.++.... +. .....++.+.++++.++|. .+....
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~gL~~~~~~~~--- 142 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF----------GF------SEDEAKEKALKWLKKVGLSEDLISKS--- 142 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHc----------CC------CHHHHHHHHHHHHHHcCCChhHhhCC---
Confidence 2345799999998 578889999997531100 00 0000123345667777774 232221
Q ss_pred CccccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCch-hhccce
Q 001446 983 WDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLE 1058 (1075)
Q Consensus 983 ldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i-~~~~~~ 1058 (1075)
...||||||||++|||||+++|++|||||||++||..+...+.+.+++ .|.|+|+|+|++..+ ++.|++
T Consensus 143 -------~~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 143 -------PFELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred -------cccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEE
Confidence 346999999999999999999999999999999999998887776643 489999999999865 689999
Q ss_pred EEEEcCC
Q 001446 1059 LRLIDGE 1065 (1075)
Q Consensus 1059 l~l~~g~ 1065 (1075)
+.|.+|.
T Consensus 216 ~~l~~G~ 222 (287)
T PRK13641 216 LVLEHGK 222 (287)
T ss_pred EEEECCE
Confidence 9997765
No 457
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.7e-35 Score=323.10 Aligned_cols=204 Identities=19% Similarity=0.234 Sum_probs=162.7
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc-----CCcCc
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCG 910 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~-----~~r~~ 910 (1075)
-|+++||++.|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++...+ ..+.+
T Consensus 7 ~l~~~~l~~~~~~-~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~ 85 (269)
T PRK11831 7 LVDMRGVSFTRGN-RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKR 85 (269)
T ss_pred eEEEeCeEEEECC-EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhhc
Confidence 5899999999964 57999999999999999999999999999999999999999999999999886542 23567
Q ss_pred EEEEcCCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccccc
Q 001446 911 IFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNW 989 (1075)
Q Consensus 911 i~~VpQdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~ 989 (1075)
++||||+|.+|++ |+++|+.++...... . . ....++.+.+.++.+++.+.....
T Consensus 86 i~~v~q~~~~~~~~tv~enl~~~~~~~~~---------~----~--~~~~~~~~~~~l~~~gl~~~~~~~---------- 140 (269)
T PRK11831 86 MSMLFQSGALFTDMNVFDNVAYPLREHTQ---------L----P--APLLHSTVMMKLEAVGLRGAAKLM---------- 140 (269)
T ss_pred EEEEecccccCCCCCHHHHHHHHHHHccC---------C----C--HHHHHHHHHHHHHHcCChhhhhCC----------
Confidence 9999999999986 999999753210000 0 0 000123345567777764332221
Q ss_pred ccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCc-hhhccceEEEEcC
Q 001446 990 EDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPAL-IPFHSLELRLIDG 1064 (1075)
Q Consensus 990 g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~-i~~~~~~l~l~~g 1064 (1075)
...||||||||++||||++++|++|||||||++||.++...+.+.+++ .++|+|+|+|++.. .++.|+++.|.+|
T Consensus 141 ~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G 220 (269)
T PRK11831 141 PSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADK 220 (269)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECC
Confidence 246999999999999999999999999999999999999887776643 37999999999975 4679999999776
Q ss_pred C
Q 001446 1065 E 1065 (1075)
Q Consensus 1065 ~ 1065 (1075)
.
T Consensus 221 ~ 221 (269)
T PRK11831 221 K 221 (269)
T ss_pred E
Confidence 4
No 458
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-35 Score=318.64 Aligned_cols=199 Identities=21% Similarity=0.247 Sum_probs=164.1
Q ss_pred CccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCC-----CccEEEeCCcCc-------
Q 001446 179 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS------- 246 (1075)
Q Consensus 179 ~~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~------- 246 (1075)
.+.|+++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.+.
T Consensus 14 ~~~l~~~~l~~~~~-~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~~~ 92 (265)
T PRK14252 14 QQKSEVNKLNFYYG-GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSPEV 92 (265)
T ss_pred CceEEEEEEEEEEC-CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccccc
Confidence 45799999999996 45799999999999999999999999999999999999875 799999987531
Q ss_pred ---cccccEEEEcCCCCCCcCCHHHHhcCCCCCCccc-CcCCHHHHHHHHHHcCChh----HHhcCCCCcccCCCCCCCh
Q 001446 247 ---DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSL 318 (1075)
Q Consensus 247 ---~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSg 318 (1075)
.+++.++|+||++.++..|++||+.++....... ....++++.++++.+++.+ ..++.+ .+|||
T Consensus 93 ~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~--------~~LS~ 164 (265)
T PRK14252 93 DPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVKDRLGDLA--------FNLSG 164 (265)
T ss_pred CHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhhHHHhCCc--------ccCCH
Confidence 2356799999999988889999998753211110 1112345677788887743 233332 68999
Q ss_pred hHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 319 GEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 319 GqkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|||||++|||||+.+|+++||||||++||+.+...+.+.+++ .+.|+|+|||+++.+. .||++++|++
T Consensus 165 G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~ 235 (265)
T PRK14252 165 GQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYM 235 (265)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999888764 3689999999999884 7999999986
No 459
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-35 Score=314.55 Aligned_cols=200 Identities=21% Similarity=0.257 Sum_probs=163.6
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEEEcC
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 916 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~VpQ 916 (1075)
|+++||++.|++ .+ .|+||+|++||.+||+||||||||||+++|.|+++|.+|+|.+||.++......+.+++|+||
T Consensus 2 l~~~~l~~~~~~-~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 78 (232)
T PRK10771 2 LKLTDITWLYHH-LP--MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPVSMLFQ 78 (232)
T ss_pred eEEEEEEEEECC-cc--ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccEEEEec
Confidence 689999999974 22 499999999999999999999999999999999999999999999988765434567999999
Q ss_pred CCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCCh
Q 001446 917 RPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 995 (1075)
Q Consensus 917 dP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSg 995 (1075)
+|.+|.+ |+++|+.++....- ......++.+.++++.+++....... ...|||
T Consensus 79 ~~~~~~~~tv~e~l~~~~~~~~----------------~~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS~ 132 (232)
T PRK10771 79 ENNLFSHLTVAQNIGLGLNPGL----------------KLNAAQREKLHAIARQMGIEDLLARL----------PGQLSG 132 (232)
T ss_pred ccccccCCcHHHHHhccccccc----------------CCCHHHHHHHHHHHHHcCcHHHHhCC----------cccCCH
Confidence 9999986 99999986531100 00001234567778888886554433 246999
Q ss_pred hHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 996 GEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 996 GQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
|||||++||||++++|+++||||||++||.++...+.+.+++ .++|+|+|+|++..+ .+.|+++.+.+|.
T Consensus 133 G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 207 (232)
T PRK10771 133 GQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGR 207 (232)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999887776543 388999999999865 6889999997654
No 460
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=2.7e-35 Score=315.47 Aligned_cols=181 Identities=22% Similarity=0.292 Sum_probs=151.3
Q ss_pred eeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-ccccccEEEEcCCCCCCc-CCHHHHhcCCCC
Q 001446 198 VENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-SDLNKEIFYVPQRPYTAV-GTLRDQLIYPLT 275 (1075)
Q Consensus 198 l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-~~~~~~i~~v~Q~~~~~~-~tv~~ni~~~~~ 275 (1075)
|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ .......+|+||++.++. .|++||+.++..
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~~~l~~~~tv~e~l~~~~~ 80 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGPDRMVVFQNYSLLPWLTVRENIALAVD 80 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhheEEecCcccCCCCCHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999864 122234689999998776 599999987521
Q ss_pred C--CcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHH
Q 001446 276 S--DQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEER 353 (1075)
Q Consensus 276 ~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~illLDEpts~LD~~~~~~ 353 (1075)
. .........+++.++++.+++.+..++.+ .+||||||||++|||||+.+|+++||||||++||+.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~ 152 (230)
T TIGR01184 81 RVLPDLSKSERRAIVEEHIALVGLTEAADKRP--------GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTRGN 152 (230)
T ss_pred hcccCCCHHHHHHHHHHHHHHcCCHHHHcCCh--------hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHH
Confidence 1 11101112335678899999988777765 6899999999999999999999999999999999999999
Q ss_pred HHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 354 FCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 354 i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 153 l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~ 190 (230)
T TIGR01184 153 LQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTN 190 (230)
T ss_pred HHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeC
Confidence 9887754 3789999999999864 6999999986
No 461
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=6.1e-35 Score=318.34 Aligned_cols=197 Identities=22% Similarity=0.321 Sum_probs=160.9
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC-----c-c-------
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----S-D------- 247 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~-----~-~------- 247 (1075)
.++++|+++.|+ +.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ . .
T Consensus 3 ~l~~~~l~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (253)
T TIGR02323 3 LLQVSGLSKSYG-GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAERR 81 (253)
T ss_pred eEEEeeeEEEeC-CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHHH
Confidence 589999999996 4579999999999999999999999999999999999999999999998753 1 0
Q ss_pred --ccccEEEEcCCCCC---CcCCHHHHhcCCCC-CCcccCcCCHHHHHHHHHHcCCh-hHHhcCCCCcccCCCCCCChhH
Q 001446 248 --LNKEIFYVPQRPYT---AVGTLRDQLIYPLT-SDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGE 320 (1075)
Q Consensus 248 --~~~~i~~v~Q~~~~---~~~tv~~ni~~~~~-~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~g~~LSgGq 320 (1075)
+++.++|++|+|.. +..|+.+|+.+... ..........+++.++++.+++. ...++.+ ..|||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~--------~~LSgG~ 153 (253)
T TIGR02323 82 RLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDPTRIDDLP--------RAFSGGM 153 (253)
T ss_pred HhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCChhhhhcCc--------hhcCHHH
Confidence 12469999999852 23488888854210 00000011235677889999996 4566654 6899999
Q ss_pred HHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 321 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 321 kqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
|||++|||||+.+|+++||||||++||+.+.+.+.+.+++ .|.|+|++||+++.+. .+|++++|++
T Consensus 154 ~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~ 224 (253)
T TIGR02323 154 QQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQ 224 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 9999999999999999999999999999999999887753 3899999999999886 6999999986
No 462
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-35 Score=320.79 Aligned_cols=206 Identities=23% Similarity=0.291 Sum_probs=164.8
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEEEE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFYV 914 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~~V 914 (1075)
|+++|++++|++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.++|.++...+ ..+..++|+
T Consensus 3 l~~~~l~~~~~~-~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 81 (255)
T PRK11231 3 LRTENLTVGYGT-KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLALL 81 (255)
T ss_pred EEEEeEEEEECC-EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEEe
Confidence 789999999974 57999999999999999999999999999999999999999999999999886542 345579999
Q ss_pred cCCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCC
Q 001446 915 PQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDIL 993 (1075)
Q Consensus 915 pQdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~L 993 (1075)
||++.+|.+ |+++|+.++....... .+. .....+..+.++++.+++.+..... ...|
T Consensus 82 ~q~~~~~~~~tv~~~i~~~~~~~~~~------~~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~L 139 (255)
T PRK11231 82 PQHHLTPEGITVRELVAYGRSPWLSL------WGR------LSAEDNARVNQAMEQTRINHLADRR----------LTDL 139 (255)
T ss_pred cccCCCCCCccHHHHHHhccchhhhh------ccC------CCHHHHHHHHHHHHHcCCHHHHcCC----------cccC
Confidence 999999876 9999998642110000 000 0001123455667777775433222 3569
Q ss_pred ChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 994 SLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 994 SgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
|||||||++||||++++|++|||||||++||.++...+.+.+++ .++|+|+|+|+++.+ ++.|+++.+.+|.
T Consensus 140 S~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~ 215 (255)
T PRK11231 140 SGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGH 215 (255)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCe
Confidence 99999999999999999999999999999999999888776643 489999999999864 6899999997664
No 463
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=321.68 Aligned_cols=216 Identities=21% Similarity=0.252 Sum_probs=165.1
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc---CCcCcEE
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIF 912 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~---~~r~~i~ 912 (1075)
.|+++||++.|++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.++|.++...+ ..+.+++
T Consensus 5 ~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 83 (255)
T PRK11300 5 LLSVSGLMMRFGG-LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGVV 83 (255)
T ss_pred eEEEeeEEEEECC-EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCeE
Confidence 4899999999964 57999999999999999999999999999999999999999999999999887652 2345699
Q ss_pred EEcCCCCCCCc-chhhhhcCCCCh--HHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccccc
Q 001446 913 YVPQRPYTCLG-TLRDQIIYPLSR--EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNW 989 (1075)
Q Consensus 913 ~VpQdP~Lf~g-Tir~NL~~p~~~--~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~ 989 (1075)
|+||+|.+|.+ |+++|+.++... ..+... ...+. .............+.++++.+++.+.... .
T Consensus 84 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~l~~~gl~~~~~~----------~ 150 (255)
T PRK11300 84 RTFQHVRLFREMTVIENLLVAQHQQLKTGLFS--GLLKT-PAFRRAESEALDRAATWLERVGLLEHANR----------Q 150 (255)
T ss_pred EeccCcccCCCCcHHHHHHHhhhccccchhhh--hhccc-cccccchhHHHHHHHHHHHhCChhhhhhC----------C
Confidence 99999999986 999999864210 000000 00000 00000000012345566677766443322 1
Q ss_pred ccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCch-hhccceEEEEcC
Q 001446 990 EDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDG 1064 (1075)
Q Consensus 990 g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i-~~~~~~l~l~~g 1064 (1075)
...||||||||++||||++++|++|||||||++||..+...+.+.+.+ .++|+|+|+|+++.+ ++.|+++.+.+|
T Consensus 151 ~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g 230 (255)
T PRK11300 151 AGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQG 230 (255)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 356999999999999999999999999999999999999888776642 389999999999876 789999999776
Q ss_pred C
Q 001446 1065 E 1065 (1075)
Q Consensus 1065 ~ 1065 (1075)
.
T Consensus 231 ~ 231 (255)
T PRK11300 231 T 231 (255)
T ss_pred e
Confidence 5
No 464
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=323.83 Aligned_cols=203 Identities=22% Similarity=0.318 Sum_probs=163.3
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc----cCCcCcEE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE----AGSGCGIF 912 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~----~~~r~~i~ 912 (1075)
|+++||+++|++.+++|+|+||+|++||.+||+||||||||||+++|.|+++|.+|+|.++|.+++.. ...+.+|+
T Consensus 2 l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 81 (275)
T PRK13639 2 LETRDLKYSYPDGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTVG 81 (275)
T ss_pred EEEEEEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhheE
Confidence 68999999997556799999999999999999999999999999999999999999999999988521 12456799
Q ss_pred EEcCCC--CCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccc
Q 001446 913 YVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 990 (1075)
Q Consensus 913 ~VpQdP--~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 990 (1075)
|+||+| .+|..|+++|+.++... .+.. .....+.+.++++.++|.++.... .
T Consensus 82 ~v~q~~~~~~~~~tv~e~i~~~~~~----------~~~~------~~~~~~~~~~~l~~~~L~~~~~~~----------~ 135 (275)
T PRK13639 82 IVFQNPDDQLFAPTVEEDVAFGPLN----------LGLS------KEEVEKRVKEALKAVGMEGFENKP----------P 135 (275)
T ss_pred EEeeChhhhhccccHHHHHHHHHHH----------cCCC------HHHHHHHHHHHHHHCCCchhhcCC----------h
Confidence 999998 57889999999753100 0000 000123355677777774332221 3
Q ss_pred cCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 991 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 991 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
..||||||||++||||++++|++|||||||++||..+...+.+.+++ .++|+|+|+|+++.+ ++.|+++.|.+|.
T Consensus 136 ~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~ 214 (275)
T PRK13639 136 HHLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGK 214 (275)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 46999999999999999999999999999999999999888776643 489999999999866 5899999998765
No 465
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=6.8e-35 Score=317.54 Aligned_cols=194 Identities=24% Similarity=0.317 Sum_probs=160.8
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCC----CccEEEeCCcCc---c-ccccE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL----VSGHIAKPGVGS---D-LNKEI 252 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~----~~G~i~~~~~~~---~-~~~~i 252 (1075)
.++++|+++.| ++++|+|+||++++||+++|+||||||||||+++|+|+.+| ++|+|.++|.+. . .++.+
T Consensus 4 ~l~~~~l~~~~--~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i 81 (254)
T PRK10418 4 QIELRNIALQA--AQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKI 81 (254)
T ss_pred EEEEeCeEEEe--ccceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceE
Confidence 58999999998 46799999999999999999999999999999999999999 999999998641 1 23579
Q ss_pred EEEcCCCC-CC--cCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChh---HHhcCCCCcccCCCCCCChhHHHHHHH
Q 001446 253 FYVPQRPY-TA--VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEY---LLDRYPPEKEINWGDELSLGEQQRLGM 326 (1075)
Q Consensus 253 ~~v~Q~~~-~~--~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~---~~~~~~~~~~~~~g~~LSgGqkqRl~l 326 (1075)
+|+||+|. .+ ..|+.+|+.+...... ....++++.++++.+++.+ ..++.+ .+||||||||++|
T Consensus 82 ~~v~q~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~LS~Gq~qrv~l 151 (254)
T PRK10418 82 ATIMQNPRSAFNPLHTMHTHARETCLALG--KPADDATLTAALEAVGLENAARVLKLYP--------FEMSGGMLQRMMI 151 (254)
T ss_pred EEEecCCccccCccccHHHHHHHHHHHcC--CChHHHHHHHHHHHcCCCChhhhhhcCC--------cccCHHHHHHHHH
Confidence 99999984 23 2588888754311111 0112356788999999976 345544 6899999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 327 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 327 Aral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
||||+.+|++|||||||++||+.+.+.+.+.+++ .|.|+|++||+++.+. .||++++|++
T Consensus 152 aral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~ 216 (254)
T PRK10418 152 ALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSH 216 (254)
T ss_pred HHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999998887754 3789999999999874 7999999986
No 466
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-35 Score=318.93 Aligned_cols=198 Identities=20% Similarity=0.252 Sum_probs=163.4
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCC-----ccEEEeCCcCc--------
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV-----SGHIAKPGVGS-------- 246 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~-----~G~i~~~~~~~-------- 246 (1075)
+.++++|+++.|+ +.++|+|+||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.+.
T Consensus 6 ~~l~~~nl~~~~~-~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~ 84 (261)
T PRK14258 6 PAIKVNNLSFYYD-TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLN 84 (261)
T ss_pred ceEEEeeEEEEeC-CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchH
Confidence 3699999999995 357999999999999999999999999999999999999985 89999988541
Q ss_pred cccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccC-cCCHHHHHHHHHHcCChhH----HhcCCCCcccCCCCCCChhHH
Q 001446 247 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVE-PLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQ 321 (1075)
Q Consensus 247 ~~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~----~~~~~~~~~~~~g~~LSgGqk 321 (1075)
.+++.++|+||++.++..|++||+.++........ ....+++.++++.+++.+. .++. ..+||||||
T Consensus 85 ~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~~LSgGq~ 156 (261)
T PRK14258 85 RLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHKIHKS--------ALDLSGGQQ 156 (261)
T ss_pred HhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhHhcCC--------cccCCHHHH
Confidence 23567999999998888999999986422111000 1113456778888887543 3332 268999999
Q ss_pred HHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 322 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 322 qRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
||++|||||+++|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+. .||+|++|++
T Consensus 157 qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~ 226 (261)
T PRK14258 157 QRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKG 226 (261)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEcc
Confidence 999999999999999999999999999999999887754 3899999999999875 7999999986
No 467
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-35 Score=323.25 Aligned_cols=202 Identities=20% Similarity=0.225 Sum_probs=161.3
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc----cCCcCcEE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE----AGSGCGIF 912 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~----~~~r~~i~ 912 (1075)
|+++||++.|++ +++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++... ...|.+++
T Consensus 2 l~~~~l~~~~~~-~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i~ 80 (271)
T PRK13638 2 LATSDLWFRYQD-EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQVA 80 (271)
T ss_pred eEEEEEEEEcCC-cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhheE
Confidence 689999999974 5699999999999999999999999999999999999999999999999988521 12356799
Q ss_pred EEcCCCC--CCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccc
Q 001446 913 YVPQRPY--TCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 990 (1075)
Q Consensus 913 ~VpQdP~--Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 990 (1075)
||||+|. +|..|+.+|+.++... .+.. .......+.++++.+++.+.... ..
T Consensus 81 ~v~q~~~~~~~~~~~~~~l~~~~~~----------~~~~------~~~~~~~~~~~l~~~~l~~~~~~----------~~ 134 (271)
T PRK13638 81 TVFQDPEQQIFYTDIDSDIAFSLRN----------LGVP------EAEITRRVDEALTLVDAQHFRHQ----------PI 134 (271)
T ss_pred EEeeChhhccccccHHHHHHHHHHH----------cCCC------HHHHHHHHHHHHHHcCCHhHhcC----------Cc
Confidence 9999986 5778899999753110 0000 00012234556677776443221 13
Q ss_pred cCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 991 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 991 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
..||||||||++|||||+++|+||||||||++||.++...+.+.+++ .++|+|+|+|++..+ ++.|+++.|.+|.
T Consensus 135 ~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~ 213 (271)
T PRK13638 135 QCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQ 213 (271)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 46999999999999999999999999999999999999888776643 489999999999876 7899999997765
No 468
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.2e-34 Score=316.81 Aligned_cols=195 Identities=21% Similarity=0.301 Sum_probs=159.6
Q ss_pred CCceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccCCcCcEEE
Q 001446 834 QDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFY 913 (1075)
Q Consensus 834 ~g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~~r~~i~~ 913 (1075)
.+.|+++|++++ .+++|+|+||+|++||++||+|+||||||||+++|.|+++|.+|+|.++| +++|
T Consensus 37 ~~~l~i~nls~~---~~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-----------~i~y 102 (282)
T cd03291 37 DNNLFFSNLCLV---GAPVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-----------RISF 102 (282)
T ss_pred CCeEEEEEEEEe---cccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-----------EEEE
Confidence 457999999995 35799999999999999999999999999999999999999999999988 3999
Q ss_pred EcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc-ccccC
Q 001446 914 VPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDI 992 (1075)
Q Consensus 914 VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~-~~g~~ 992 (1075)
+||+|.+|++|+++|+.++....+ ..+.+.++.+++.+.+...+.++++.. ..+..
T Consensus 103 v~q~~~l~~~tv~enl~~~~~~~~-----------------------~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~ 159 (282)
T cd03291 103 SSQFSWIMPGTIKENIIFGVSYDE-----------------------YRYKSVVKACQLEEDITKFPEKDNTVLGEGGIT 159 (282)
T ss_pred EeCcccccccCHHHHhhcccccCH-----------------------HHHHHHHHHhCCHHHHHhccccccceecCCCCc
Confidence 999999999999999986422111 111223344444444555556666554 23568
Q ss_pred CChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHH-HH--hcCceEEEecCCCCchhhccceEEEEcCC
Q 001446 993 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRL-AK--DMGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 993 LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~-~~--~~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
||+|||||++|||||+++|+||||||||++||.++...+.+. ++ ..+.|+|+|+|++..+...|+++.|.+|.
T Consensus 160 LSgGq~qrv~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~ 235 (282)
T cd03291 160 LSGGQRARISLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGS 235 (282)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999998876553 22 24789999999999889999999997765
No 469
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.8e-36 Score=283.68 Aligned_cols=197 Identities=22% Similarity=0.265 Sum_probs=166.4
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC---------------
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG--------------- 245 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~--------------- 245 (1075)
.++++|+.+.|. ...+|+++||+.++|+++.|+|.|||||||+||||.=+..|+.|.|.++|..
T Consensus 6 ~l~v~dlHK~~G-~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~ad 84 (256)
T COG4598 6 ALEVEDLHKRYG-EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKPAD 84 (256)
T ss_pred ceehhHHHhhcc-cchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeeeCC
Confidence 588999999884 4679999999999999999999999999999999999999999999999852
Q ss_pred ----ccccccEEEEcCCCCCCc-CCHHHHhcCC-CCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChh
Q 001446 246 ----SDLNKEIFYVPQRPYTAV-GTLRDQLIYP-LTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLG 319 (1075)
Q Consensus 246 ----~~~~~~i~~v~Q~~~~~~-~tv~~ni~~~-~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgG 319 (1075)
..+|.+.++|+|+..++. .|+.||+.-. ...-........++....|.++|+.+..+.+| ..||||
T Consensus 85 ~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~ek~~~YP--------~~LSGG 156 (256)
T COG4598 85 KRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIAEKADAYP--------AHLSGG 156 (256)
T ss_pred HHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCchhhhhcCc--------cccCch
Confidence 124668999999998876 5999999742 11111112223456778899999999999998 689999
Q ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHH---HHhcCCeEEEEecChhhHhh-CCeEEEEcC
Q 001446 320 EQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAK---VRAMGTSCITISHRPALVAF-HDVVLSLDG 386 (1075)
Q Consensus 320 qkqRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~---l~~~~~t~i~vtH~~~~~~~-~d~i~~l~~ 386 (1075)
||||++|||||..+|+++++|||||+|||+..-++++. |.+.|+|.++|||.+.+.+. ..+++.+.+
T Consensus 157 QQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~ 227 (256)
T COG4598 157 QQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQ 227 (256)
T ss_pred HHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeec
Confidence 99999999999999999999999999999988776554 55679999999999999875 678888875
No 470
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=3.3e-35 Score=328.85 Aligned_cols=206 Identities=23% Similarity=0.301 Sum_probs=162.4
Q ss_pred ceEEeeeeeeCCC------------ccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcc
Q 001446 836 SISFSKLDIITPS------------QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDE 903 (1075)
Q Consensus 836 ~I~f~~V~~~yp~------------~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~ 903 (1075)
-|+++|++++|+. ...+|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++..
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 5899999998863 2469999999999999999999999999999999999999999999999999876
Q ss_pred cc-----CCcCcEEEEcCCC--CCC-CcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchh-
Q 001446 904 EA-----GSGCGIFYVPQRP--YTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSY- 974 (1075)
Q Consensus 904 ~~-----~~r~~i~~VpQdP--~Lf-~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~- 974 (1075)
.+ ..|.+|+||+|+| .|| ..|+++||.++...... +. .....++.+.++++.++|..
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~--------~~------~~~~~~~~~~~~l~~vgl~~~ 153 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHP--------KL------SRQEVKDRVKAMMLKVGLLPN 153 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhcc--------CC------CHHHHHHHHHHHHHHcCCChH
Confidence 52 2456799999999 466 47999999753210000 00 00001234456777777732
Q ss_pred hhhhhccCCccccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCC
Q 001446 975 LLEREEVGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPA 1050 (1075)
Q Consensus 975 ~i~~~~~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls 1050 (1075)
...+ ....||||||||++|||||+.+|++||||||||+||..++..+.+++++ .+.|+|+|+|+++
T Consensus 154 ~~~~----------~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~ 223 (331)
T PRK15079 154 LINR----------YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA 223 (331)
T ss_pred HhcC----------CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 2111 2357999999999999999999999999999999999999887776543 4899999999999
Q ss_pred chh-hccceEEEEcCC
Q 001446 1051 LIP-FHSLELRLIDGE 1065 (1075)
Q Consensus 1051 ~i~-~~~~~l~l~~g~ 1065 (1075)
.+. +.|++++|.+|.
T Consensus 224 ~~~~~~dri~vl~~G~ 239 (331)
T PRK15079 224 VVKHISDRVLVMYLGH 239 (331)
T ss_pred HHHHhCCEEEEEECCE
Confidence 775 799999997653
No 471
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-35 Score=302.15 Aligned_cols=167 Identities=26% Similarity=0.292 Sum_probs=148.3
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc----CCcCcEE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA----GSGCGIF 912 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~----~~r~~i~ 912 (1075)
|+++|++++|++ +++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.++|.++...+ ..+..++
T Consensus 1 i~~~~l~~~~~~-~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 79 (178)
T cd03229 1 LELKNVSKRYGQ-KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRIG 79 (178)
T ss_pred CEEEEEEEEECC-eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcEE
Confidence 578999999965 57999999999999999999999999999999999999999999999999887642 3456799
Q ss_pred EEcCCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccccccc
Q 001446 913 YVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 991 (1075)
Q Consensus 913 ~VpQdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~ 991 (1075)
|+||+|.+|.+ |+++|+.+.
T Consensus 80 ~~~q~~~~~~~~t~~~~l~~~----------------------------------------------------------- 100 (178)
T cd03229 80 MVFQDFALFPHLTVLENIALG----------------------------------------------------------- 100 (178)
T ss_pred EEecCCccCCCCCHHHheeec-----------------------------------------------------------
Confidence 99999998864 999988521
Q ss_pred CCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---c-CceEEEecCCCCchh-hccceEEEEcC
Q 001446 992 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---M-GITFVTSSQRPALIP-FHSLELRLIDG 1064 (1075)
Q Consensus 992 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~-~~TvI~IaHRls~i~-~~~~~l~l~~g 1064 (1075)
||+|||||++||||++++|+++||||||++||.++...+.+.+++ . ++|+|+|+|++..+. +.|+++.+++|
T Consensus 101 -lS~G~~qr~~la~al~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g 177 (178)
T cd03229 101 -LSGGQQQRVALARALAMDPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDG 177 (178)
T ss_pred -CCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCC
Confidence 599999999999999999999999999999999999888776643 3 799999999998776 89999999766
No 472
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-35 Score=317.34 Aligned_cols=198 Identities=29% Similarity=0.359 Sum_probs=163.2
Q ss_pred ccEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCC------cC------cc
Q 001446 180 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPG------VG------SD 247 (1075)
Q Consensus 180 ~~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~------~~------~~ 247 (1075)
+.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .+ ..
T Consensus 9 ~~i~~~~~~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~ 87 (257)
T PRK14246 9 DVFNISRLYLYIN-DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIK 87 (257)
T ss_pred hheeeeeEEEecC-CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHH
Confidence 4799999999995 56799999999999999999999999999999999999999998777665 22 12
Q ss_pred ccccEEEEcCCCCCCcC-CHHHHhcCCCCCCccc-CcCCHHHHHHHHHHcCChh----HHhcCCCCcccCCCCCCChhHH
Q 001446 248 LNKEIFYVPQRPYTAVG-TLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQ 321 (1075)
Q Consensus 248 ~~~~i~~v~Q~~~~~~~-tv~~ni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGqk 321 (1075)
.++.++|+||+|.++.+ |+++|+.++....... ......++.++++.+++.. ..++.+ ..||||||
T Consensus 88 ~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--------~~LS~G~~ 159 (257)
T PRK14246 88 LRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYDRLNSPA--------SQLSGGQQ 159 (257)
T ss_pred HhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchhhhcCCc--------ccCCHHHH
Confidence 35679999999988765 9999998753211111 1111244677888888863 334433 68999999
Q ss_pred HHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhH-hhCCeEEEEcC
Q 001446 322 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 386 (1075)
Q Consensus 322 qRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~-~~~d~i~~l~~ 386 (1075)
||++||||++.+|+++||||||++||+.+++.+.+.+.+ .+.|+|++||+++.+ ..||++++|++
T Consensus 160 qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~ 227 (257)
T PRK14246 160 QRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYN 227 (257)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999888764 368999999999988 57999999985
No 473
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-35 Score=275.14 Aligned_cols=205 Identities=26% Similarity=0.355 Sum_probs=171.1
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------------ccc
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------------SDL 248 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------------~~~ 248 (1075)
.|.++|+++.|. ...+|-|++|+-+.||.+.+.||||+|||||+|.|.=+..|.+|+..+.|.. .++
T Consensus 2 sirv~~in~~yg-~~q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~p~sg~l~ia~~~fd~s~~~~~k~i~~l 80 (242)
T COG4161 2 SIQLNGINCFYG-AHQALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRDL 80 (242)
T ss_pred ceEEcccccccc-cchheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhCCCCCeEEecccccccccCccHHHHHHH
Confidence 378999999885 4678999999999999999999999999999999999999999999987642 246
Q ss_pred cccEEEEcCCCCCCc-CCHHHHhcCC-CCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHH
Q 001446 249 NKEIFYVPQRPYTAV-GTLRDQLIYP-LTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 326 (1075)
Q Consensus 249 ~~~i~~v~Q~~~~~~-~tv~~ni~~~-~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~l 326 (1075)
|+++|+|+|.-.+.+ .||.||+.-. ....+..+.....+..++|+++.|.++.|++| -.|||||+|||||
T Consensus 81 r~~vgmvfqqy~lwphltv~enlieap~kv~gl~~~qa~~~a~ellkrlrl~~~adr~p--------lhlsggqqqrvai 152 (242)
T COG4161 81 RRNVGMVFQQYNLWPHLTVQENLIEAPCRVLGLSKDQALARAEKLLKRLRLKPYADRYP--------LHLSGGQQQRVAI 152 (242)
T ss_pred HHhhhhhhhhhccCchhHHHHHHHhhhHHHhCCCHHHHHHHHHHHHHHhccccccccCc--------eecccchhhhHHH
Confidence 789999999988765 5999999742 22222222233456778999999999999999 5899999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHH---hcCCeEEEEecChhhHh-hCCeEEEEcCCCcEEEecCC
Q 001446 327 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVR---AMGTSCITISHRPALVA-FHDVVLSLDGEGEWRVHDKR 396 (1075)
Q Consensus 327 Aral~~~p~illLDEpts~LD~~~~~~i~~~l~---~~~~t~i~vtH~~~~~~-~~d~i~~l~~~g~~~~~~~~ 396 (1075)
||||+.+|++|++||||++|||+-...+.+.++ ..|.|-++|||..+..+ .+.+++.|++ +.+++.+.
T Consensus 153 aralmmkpqvllfdeptaaldpeitaqvv~iikel~~tgitqvivthev~va~k~as~vvyme~--g~ive~g~ 224 (242)
T COG4161 153 ARALMMEPQVLLFDEPTAALDPEITAQIVSIIKELAETGITQVIVTHEVEVARKTASRVVYMEN--GHIVEQGD 224 (242)
T ss_pred HHHHhcCCcEEeecCcccccCHHHHHHHHHHHHHHHhcCceEEEEEeehhHHHhhhhheEeeec--CeeEeecc
Confidence 999999999999999999999998877766655 45999999999999885 5899999986 34555443
No 474
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=315.96 Aligned_cols=199 Identities=21% Similarity=0.191 Sum_probs=164.5
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCC-----CccEEEeCCcCc--------c
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS--------D 247 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~-----~~G~i~~~~~~~--------~ 247 (1075)
.+.+++++++|. +.++|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.+. .
T Consensus 8 ~~~~~~~~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~ 86 (261)
T PRK14263 8 VMDCKLDKIFYG-NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVV 86 (261)
T ss_pred eEEEEeEEEEeC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHh
Confidence 588999999885 46799999999999999999999999999999999999986 799999998641 2
Q ss_pred ccccEEEEcCCCCCCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHH
Q 001446 248 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 327 (1075)
Q Consensus 248 ~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lA 327 (1075)
+++.++|+||+++++..|++||+.++...... .....+++.++++.+++.+.+.... .....+||||||||++||
T Consensus 87 ~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~i~~~~----~~~~~~LS~G~~qrv~la 161 (261)
T PRK14263 87 VRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRY-KGDLGDRVKHALQGAALWDEVKDKL----KVSGLSLSGGQQQRLCIA 161 (261)
T ss_pred hhhceEEEecCCccccccHHHHHHHHHhhcCc-hHHHHHHHHHHHHHcCCchhhhhhh----hCCcccCCHHHHHHHHHH
Confidence 35679999999998889999999876432111 1112346778899998865432211 012368999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhH-hhCCeEEEEc
Q 001446 328 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLD 385 (1075)
Q Consensus 328 ral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~-~~~d~i~~l~ 385 (1075)
|||+++|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+ ..||++++|+
T Consensus 162 ral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~ 222 (261)
T PRK14263 162 RAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFS 222 (261)
T ss_pred HHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEe
Confidence 999999999999999999999999999998865 378999999999976 5799999996
No 475
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.2e-35 Score=323.21 Aligned_cols=204 Identities=20% Similarity=0.252 Sum_probs=161.2
Q ss_pred eEEeeeeeeCCC--------ccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc---
Q 001446 837 ISFSKLDIITPS--------QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--- 905 (1075)
Q Consensus 837 I~f~~V~~~yp~--------~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--- 905 (1075)
|+++||++.|++ .+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 789999999863 367999999999999999999999999999999999999999999999999887652
Q ss_pred --CCcCcEEEEcCCCC--CC-CcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCch-hhhhhh
Q 001446 906 --GSGCGIFYVPQRPY--TC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS-YLLERE 979 (1075)
Q Consensus 906 --~~r~~i~~VpQdP~--Lf-~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~-~~i~~~ 979 (1075)
..|.+++||||+|. ++ ..|+++||.++.... .+. .....++.+.++++.+++. .....
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~---------~~~------~~~~~~~~~~~~l~~~gl~~~~~~~- 146 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHL---------TSL------DESEQKARIAELLDMVGLRSEDADK- 146 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHh---------cCC------CHHHHHHHHHHHHHHcCCChhhhhC-
Confidence 13567999999983 44 479999996431100 000 0001134456677777763 22111
Q ss_pred ccCCccccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCchh-h
Q 001446 980 EVGWDANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIP-F 1054 (1075)
Q Consensus 980 ~~Gldt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i~-~ 1054 (1075)
....||||||||++||||++++|+||||||||++||.++...+.+.+++ .++|+|+|+|++..+. +
T Consensus 147 ---------~~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~ 217 (265)
T TIGR02769 147 ---------LPRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSF 217 (265)
T ss_pred ---------ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHH
Confidence 1356999999999999999999999999999999999998877766643 3899999999998774 8
Q ss_pred ccceEEEEcCC
Q 001446 1055 HSLELRLIDGE 1065 (1075)
Q Consensus 1055 ~~~~l~l~~g~ 1065 (1075)
.|+++.|.+|.
T Consensus 218 ~d~i~~l~~G~ 228 (265)
T TIGR02769 218 CQRVAVMDKGQ 228 (265)
T ss_pred hcEEEEEeCCE
Confidence 99999997664
No 476
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=7.8e-36 Score=280.10 Aligned_cols=191 Identities=20% Similarity=0.307 Sum_probs=157.6
Q ss_pred CccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc--cCCcCcEEEEcCCCCCCCcch
Q 001446 848 SQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTL 925 (1075)
Q Consensus 848 ~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~--~~~r~~i~~VpQdP~Lf~gTi 925 (1075)
++.++|+++||++.+||.++|.||||||||||++.++-+..|++|.++.-|.|++.. ...|++++|+-|.|.||.+||
T Consensus 14 ~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLfg~tV 93 (223)
T COG4619 14 GDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALFGDTV 93 (223)
T ss_pred CCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCccccccch
Confidence 467899999999999999999999999999999999999999999999999999988 468999999999999999999
Q ss_pred hhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCChhHHHHHHHHH
Q 001446 926 RDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSLGEQQRLGMAR 1005 (1075)
Q Consensus 926 r~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LSgGQrQrlaiAR 1005 (1075)
.+|+.+|..-... ....+...+.|+.++|.+-+ |+.. -.+||||||||+||+|
T Consensus 94 eDNlifP~~~r~r------------------r~dr~aa~~llar~~l~~~~------L~k~---it~lSGGE~QriAliR 146 (223)
T COG4619 94 EDNLIFPWQIRNR------------------RPDRAAALDLLARFALPDSI------LTKN---ITELSGGEKQRIALIR 146 (223)
T ss_pred hhccccchHHhcc------------------CCChHHHHHHHHHcCCchhh------hcch---hhhccchHHHHHHHHH
Confidence 9999988531100 00111223345555553221 1222 2469999999999999
Q ss_pred HhhcCCCEeEeeccCCCCCHHHHHHHHHHH----HhcCceEEEecCCCC-chhhccceEEEEcCC
Q 001446 1006 LFFHKPKFGILDECTNATSVDVEEQLYRLA----KDMGITFVTSSQRPA-LIPFHSLELRLIDGE 1065 (1075)
Q Consensus 1006 AlLr~p~ILiLDEATSalD~~~e~~i~~~~----~~~~~TvI~IaHRls-~i~~~~~~l~l~~g~ 1065 (1075)
-|---|+||+|||+|||||..+.+.|.+++ ++.+..++=|+|..+ .++++++++.+.+|.
T Consensus 147 ~Lq~~P~ILLLDE~TsALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~ 211 (223)
T COG4619 147 NLQFMPKILLLDEITSALDESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGH 211 (223)
T ss_pred HhhcCCceEEecCchhhcChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCc
Confidence 999999999999999999999887776665 456899999999997 499999999998775
No 477
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=324.74 Aligned_cols=205 Identities=22% Similarity=0.309 Sum_probs=167.2
Q ss_pred CceEEeeeeeeCCC-ccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCC---CeEecCCCCCcccc--CCc
Q 001446 835 DSISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVS---GSLTKPSQHIDEEA--GSG 908 (1075)
Q Consensus 835 g~I~f~~V~~~yp~-~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~s---G~I~idg~di~~~~--~~r 908 (1075)
+.|+++|+++.|++ ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++ |+|.++|.++.... ..+
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 46999999999975 3579999999999999999999999999999999999999987 89999999887542 345
Q ss_pred CcEEEEcCCC--CCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccc
Q 001446 909 CGIFYVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 986 (1075)
Q Consensus 909 ~~i~~VpQdP--~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~ 986 (1075)
.+++||||+| .++..|+++||.|+.... +. .....++.+.++++.++|.+.....
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~----------~~------~~~~~~~~~~~~l~~~~L~~~~~~~------- 140 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENR----------AV------PRPEMIKIVRDVLADVGMLDYIDSE------- 140 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhC----------CC------CHHHHHHHHHHHHHHCCChhHhcCC-------
Confidence 6799999999 467889999997632100 00 0000123456677888876544333
Q ss_pred cccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCchhhccceEEEE
Q 001446 987 LNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRLI 1062 (1075)
Q Consensus 987 ~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i~~~~~~l~l~ 1062 (1075)
...||+|||||++|||||+++|++|||||||++||..+...+.+.++. .++|||+|+|+++.+.+.|+++.|.
T Consensus 141 ---~~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~ 217 (282)
T PRK13640 141 ---PANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLD 217 (282)
T ss_pred ---cccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEE
Confidence 256999999999999999999999999999999999999887776643 3899999999999889999999997
Q ss_pred cCC
Q 001446 1063 DGE 1065 (1075)
Q Consensus 1063 ~g~ 1065 (1075)
+|.
T Consensus 218 ~G~ 220 (282)
T PRK13640 218 DGK 220 (282)
T ss_pred CCE
Confidence 775
No 478
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=4e-35 Score=308.48 Aligned_cols=195 Identities=24% Similarity=0.298 Sum_probs=159.5
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc-cCCcCcEEEEc
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYVP 915 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~-~~~r~~i~~Vp 915 (1075)
|+++|+++.|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++... ...+.+++++|
T Consensus 2 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~~~~~~~~~~~~ 80 (204)
T PRK13538 2 LEARNLACERDE-RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQRDEYHQDLLYLG 80 (204)
T ss_pred eEEEEEEEEECC-EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccchHHhhhheEEeC
Confidence 688999999865 5699999999999999999999999999999999999999999999999988754 23456799999
Q ss_pred CCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCC
Q 001446 916 QRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 994 (1075)
Q Consensus 916 QdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 994 (1075)
|+|.+++ .|+++|+.++.... + ...++.+.++++.++|.+..... ...||
T Consensus 81 ~~~~~~~~~tv~e~l~~~~~~~----------~---------~~~~~~~~~~l~~~gl~~~~~~~----------~~~LS 131 (204)
T PRK13538 81 HQPGIKTELTALENLRFYQRLH----------G---------PGDDEALWEALAQVGLAGFEDVP----------VRQLS 131 (204)
T ss_pred CccccCcCCcHHHHHHHHHHhc----------C---------ccHHHHHHHHHHHcCCHHHhhCC----------hhhcC
Confidence 9998876 69999997532100 0 01134566777888875443221 34699
Q ss_pred hhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCch-hhccceEEE
Q 001446 995 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRL 1061 (1075)
Q Consensus 995 gGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i-~~~~~~l~l 1061 (1075)
||||||++||||++++|++|||||||++||.++...+.+.+++ .+.|+|+|+|+++.+ .|..+++.+
T Consensus 132 ~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 132 AGQQRRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 9999999999999999999999999999999999888877653 488999999999877 566666655
No 479
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=7.8e-35 Score=303.95 Aligned_cols=186 Identities=20% Similarity=0.252 Sum_probs=157.3
Q ss_pred EEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc-cc-cccEEEEcCCC
Q 001446 182 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-DL-NKEIFYVPQRP 259 (1075)
Q Consensus 182 i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~-~~-~~~i~~v~Q~~ 259 (1075)
++++|+++.|++ +.+++ +||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .. ++.++|++|++
T Consensus 2 l~~~~l~~~~~~-~~l~~-vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ 79 (195)
T PRK13541 2 LSLHQLQFNIEQ-KNLFD-LSITFLPSAITYIKGANGCGKSSLLRMIAGIMQPSSGNIYYKNCNINNIAKPYCTYIGHNL 79 (195)
T ss_pred eEEEEeeEEECC-cEEEE-EEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCcccChhhhhhEEeccCCc
Confidence 789999999953 45555 9999999999999999999999999999999999999999998641 11 34699999997
Q ss_pred CC-CcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcCCCCEEE
Q 001446 260 YT-AVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAI 338 (1075)
Q Consensus 260 ~~-~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~~p~ill 338 (1075)
.+ +..|++||+.+..... ...+++.++++.+++.+..++.+ .+||||||||++||||++++|+++|
T Consensus 80 ~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~~rl~la~al~~~p~~ll 146 (195)
T PRK13541 80 GLKLEMTVFENLKFWSEIY-----NSAETLYAAIHYFKLHDLLDEKC--------YSLSSGMQKIVAIARLIACQSDLWL 146 (195)
T ss_pred CCCccCCHHHHHHHHHHhc-----ccHHHHHHHHHHcCCHhhhccCh--------hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 65 5679999998753221 12346778889999987777654 6899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHH---hcCCeEEEEecChhhHhhCCeEE
Q 001446 339 LDECTSAVTTDMEERFCAKVR---AMGTSCITISHRPALVAFHDVVL 382 (1075)
Q Consensus 339 LDEpts~LD~~~~~~i~~~l~---~~~~t~i~vtH~~~~~~~~d~i~ 382 (1075)
|||||++||+.+.+.+.+.++ +.++|+|++||+.+.++.+|.+.
T Consensus 147 lDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~ 193 (195)
T PRK13541 147 LDEVETNLSKENRDLLNNLIVMKANSGGIVLLSSHLESSIKSAQILQ 193 (195)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCccccchhheec
Confidence 999999999999999988775 35899999999999998888653
No 480
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-35 Score=321.82 Aligned_cols=205 Identities=19% Similarity=0.177 Sum_probs=161.5
Q ss_pred CceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCC-----CCCCeEecCCCCCcc--c--c
Q 001446 835 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP-----VVSGSLTKPSQHIDE--E--A 905 (1075)
Q Consensus 835 g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~-----~~sG~I~idg~di~~--~--~ 905 (1075)
..|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++ |++|+|.++|.++.. . .
T Consensus 12 ~~l~i~nl~~~~~~-~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~ 90 (269)
T PRK14259 12 IIISLQNVTISYGT-FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPV 90 (269)
T ss_pred ceEEEEeEEEEECC-EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHH
Confidence 46999999999975 569999999999999999999999999999999999987 589999999998753 1 2
Q ss_pred CCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcc
Q 001446 906 GSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 985 (1075)
Q Consensus 906 ~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt 985 (1075)
..|.+++||||+|.+|..|+++||.++..... .....++.+.++++.++++..++. -++.
T Consensus 91 ~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~-----------------~~~~~~~~~~~~l~~~~l~~~l~~---~~~~ 150 (269)
T PRK14259 91 EVRRRIGMVFQQPNPFPKSIYENIAFGARING-----------------YTGDMDELVERSLRKAAVWDECKD---KLNE 150 (269)
T ss_pred HHhhceEEEccCCccchhhHHHHHhhhhhhcC-----------------CcHHHHHHHHHHHHHhCCcchhhh---hhCC
Confidence 24567999999999999999999986421000 000012334455566555321110 0111
Q ss_pred ccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCC-chhhccceEEEE
Q 001446 986 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPA-LIPFHSLELRLI 1062 (1075)
Q Consensus 986 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls-~i~~~~~~l~l~ 1062 (1075)
....||+|||||++|||||+++|++|||||||++||..+...+.+++++ .+.|+|+|+|++. ..++.|+++.|.
T Consensus 151 ---~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~ 227 (269)
T PRK14259 151 ---SGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFN 227 (269)
T ss_pred ---CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEe
Confidence 2356999999999999999999999999999999999999888877754 3789999999997 457899999997
Q ss_pred c
Q 001446 1063 D 1063 (1075)
Q Consensus 1063 ~ 1063 (1075)
+
T Consensus 228 ~ 228 (269)
T PRK14259 228 A 228 (269)
T ss_pred c
Confidence 6
No 481
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-35 Score=318.63 Aligned_cols=209 Identities=23% Similarity=0.235 Sum_probs=164.2
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCC-----CCCeEecCCCCCcccc--CCc
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPV-----VSGSLTKPSQHIDEEA--GSG 908 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~-----~sG~I~idg~di~~~~--~~r 908 (1075)
.|+++||++.|++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++| .+|+|.++|.++...+ ..|
T Consensus 3 ~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 81 (250)
T PRK14247 3 KIEIRDLKVSFGQ-VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELR 81 (250)
T ss_pred eEEEEeeEEEECC-eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHh
Confidence 4889999999975 5699999999999999999999999999999999999974 6999999999887642 345
Q ss_pred CcEEEEcCCCCCC-CcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc
Q 001446 909 CGIFYVPQRPYTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 987 (1075)
Q Consensus 909 ~~i~~VpQdP~Lf-~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 987 (1075)
.+++||||+|.+| ..|+++|+.++..... . . ......++.+.++++.++|...++ ..++..
T Consensus 82 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~----------~---~-~~~~~~~~~~~~~l~~~~l~~~~~---~~~~~~- 143 (250)
T PRK14247 82 RRVQMVFQIPNPIPNLSIFENVALGLKLNR----------L---V-KSKKELQERVRWALEKAQLWDEVK---DRLDAP- 143 (250)
T ss_pred ccEEEEeccCccCCCCcHHHHHHHHHHhcc----------c---c-CCHHHHHHHHHHHHHHcCCCcchh---hhhcCC-
Confidence 6799999999755 5799999975321000 0 0 000011344566777777643221 112222
Q ss_pred ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCch-hhccceEEEEcC
Q 001446 988 NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLIDG 1064 (1075)
Q Consensus 988 ~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i-~~~~~~l~l~~g 1064 (1075)
...||||||||++||||++++|+||||||||++||.++...+.+.+++ .++|+|+|+|+++.+ .+.|+++.|.+|
T Consensus 144 --~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G 221 (250)
T PRK14247 144 --AGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKG 221 (250)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECC
Confidence 346999999999999999999999999999999999999888777654 479999999999876 689999999766
Q ss_pred C
Q 001446 1065 E 1065 (1075)
Q Consensus 1065 ~ 1065 (1075)
.
T Consensus 222 ~ 222 (250)
T PRK14247 222 Q 222 (250)
T ss_pred e
Confidence 5
No 482
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-35 Score=319.61 Aligned_cols=208 Identities=23% Similarity=0.250 Sum_probs=163.4
Q ss_pred CceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCC-----CCCeEecCCCCCccc----c
Q 001446 835 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPV-----VSGSLTKPSQHIDEE----A 905 (1075)
Q Consensus 835 g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~-----~sG~I~idg~di~~~----~ 905 (1075)
..|+++||++.|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++... .
T Consensus 11 ~~l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 89 (258)
T PRK14268 11 PQIKVENLNLWYGE-KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVV 89 (258)
T ss_pred eeEEEeeeEEEeCC-eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHH
Confidence 36999999999964 5699999999999999999999999999999999999985 799999999988642 1
Q ss_pred CCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcc
Q 001446 906 GSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 985 (1075)
Q Consensus 906 ~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt 985 (1075)
..|.+++||||+|.+|+.|+++|+.++... .+.. ....++.+.++++.+++..... ..++.
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~----------~~~~------~~~~~~~~~~~l~~~~l~~~~~---~~~~~ 150 (258)
T PRK14268 90 ELRKNVGMVFQKPNPFPMSIYDNVAYGPRI----------HGAN------KKDLDGVVENALRSAALWDETS---DRLKS 150 (258)
T ss_pred HHhhhEEEEecCCccCcccHHHHHHHHHHH----------cCCC------HHHHHHHHHHHHHHcCCCcchh---hhhcC
Confidence 245679999999999999999999753100 0000 0001233455667666532110 11122
Q ss_pred ccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCch-hhccceEEEE
Q 001446 986 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLI 1062 (1075)
Q Consensus 986 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i-~~~~~~l~l~ 1062 (1075)
. ...||||||||++|||||+++|+||||||||++||.++...+.+.+++ .++|+|+|+|++..+ ++.|+++.|.
T Consensus 151 ~---~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~ 227 (258)
T PRK14268 151 P---ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFL 227 (258)
T ss_pred C---hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEE
Confidence 2 346999999999999999999999999999999999999888877654 479999999999865 7899999997
Q ss_pred cCC
Q 001446 1063 DGE 1065 (1075)
Q Consensus 1063 ~g~ 1065 (1075)
+|.
T Consensus 228 ~G~ 230 (258)
T PRK14268 228 MGE 230 (258)
T ss_pred CCE
Confidence 664
No 483
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-35 Score=317.27 Aligned_cols=198 Identities=23% Similarity=0.251 Sum_probs=159.7
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCC-----ccEEEeCCcCc--------c
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV-----SGHIAKPGVGS--------D 247 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~-----~G~i~~~~~~~--------~ 247 (1075)
.++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.+. .
T Consensus 4 ~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 82 (252)
T PRK14272 4 LLSAQDVNIYYG-DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVA 82 (252)
T ss_pred EEEEeeeEEEEC-CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHH
Confidence 588999999996 468999999999999999999999999999999999999874 89999998541 2
Q ss_pred ccccEEEEcCCCCCCc-CCHHHHhcCCCCCCcc-cCcCCHHHHHHHHHHcCChh----HHhcCCCCcccCCCCCCChhHH
Q 001446 248 LNKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQ 321 (1075)
Q Consensus 248 ~~~~i~~v~Q~~~~~~-~tv~~ni~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~g~~LSgGqk 321 (1075)
+++.++|+||++.++. .|+.||+.++...... ......+.+.+.++.+++.+ ..++. ..+||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--------~~~LS~G~~ 154 (252)
T PRK14272 83 MRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEVKDRLKTP--------ATGLSGGQQ 154 (252)
T ss_pred hhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhhhhhhcCC--------cccCCHHHH
Confidence 3457999999998877 4999999864321110 00011233445566666542 22332 368999999
Q ss_pred HHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHh-hCCeEEEEcCC
Q 001446 322 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDGE 387 (1075)
Q Consensus 322 qRl~lAral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~~ 387 (1075)
||++|||||+.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+. .||++++|+++
T Consensus 155 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G 223 (252)
T PRK14272 155 QRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVG 223 (252)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999888765 3689999999999886 69999999863
No 484
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=5.6e-35 Score=318.79 Aligned_cols=206 Identities=24% Similarity=0.310 Sum_probs=165.1
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEEEE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFYV 914 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~~V 914 (1075)
|+++|+++.|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+.+++|+
T Consensus 2 l~~~~l~~~~~~-~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (256)
T TIGR03873 2 LRLSRVSWSAGG-RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVALV 80 (256)
T ss_pred ceEEeEEEEECC-EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEEe
Confidence 689999999965 57999999999999999999999999999999999999999999999999887652 335579999
Q ss_pred cCCCC-CCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCC
Q 001446 915 PQRPY-TCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDIL 993 (1075)
Q Consensus 915 pQdP~-Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~L 993 (1075)
||+|. .+..|+++|+.++........ .. .....++.+.++++.+++.+..... ...|
T Consensus 81 ~q~~~~~~~~tv~e~l~~~~~~~~~~~------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~L 138 (256)
T TIGR03873 81 EQDSDTAVPLTVRDVVALGRIPHRSLW------AG------DSPHDAAVVDRALARTELSHLADRD----------MSTL 138 (256)
T ss_pred cccCccCCCCCHHHHHHhcchhhhhhc------cC------CCHHHHHHHHHHHHHcCcHhhhcCC----------cccC
Confidence 99996 456899999986421100000 00 0001133566777877775443222 3469
Q ss_pred ChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCch-hhccceEEEEcCC
Q 001446 994 SLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1065 (1075)
Q Consensus 994 SgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i-~~~~~~l~l~~g~ 1065 (1075)
|+|||||++||||++.+|+++||||||++||.++...+.+.+++ .+.|+|+|+|+++.+ ++.|+++.|.+|.
T Consensus 139 S~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 214 (256)
T TIGR03873 139 SGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGR 214 (256)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999999999999999998887776643 478999999999977 7899999997765
No 485
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-35 Score=317.71 Aligned_cols=202 Identities=23% Similarity=0.328 Sum_probs=162.8
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEEEE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFYV 914 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~~V 914 (1075)
|+++||+++|++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|.+|+|.++|.++...+ ..+.+++|+
T Consensus 3 l~~~~l~~~~~~-~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~~ 81 (258)
T PRK13548 3 LEARNLSVRLGG-RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAVL 81 (258)
T ss_pred EEEEeEEEEeCC-eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEEE
Confidence 789999999975 57999999999999999999999999999999999999999999999999887542 234579999
Q ss_pred cCCCCC-CCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCC
Q 001446 915 PQRPYT-CLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDIL 993 (1075)
Q Consensus 915 pQdP~L-f~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~L 993 (1075)
||+|.+ +..|+++|+.++...... .....+..+.++++.+++.+..... ...|
T Consensus 82 ~q~~~~~~~~tv~e~l~~~~~~~~~----------------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~L 135 (258)
T PRK13548 82 PQHSSLSFPFTVEEVVAMGRAPHGL----------------SRAEDDALVAAALAQVDLAHLAGRD----------YPQL 135 (258)
T ss_pred ccCCcCCCCCCHHHHHHhhhcccCC----------------CcHHHHHHHHHHHHHcCCHhHhcCC----------cccC
Confidence 999987 678999999764210000 0000123455677777775433222 3469
Q ss_pred ChhHHHHHHHHHHhh------cCCCEeEeeccCCCCCHHHHHHHHHHHH----hcCceEEEecCCCCch-hhccceEEEE
Q 001446 994 SLGEQQRLGMARLFF------HKPKFGILDECTNATSVDVEEQLYRLAK----DMGITFVTSSQRPALI-PFHSLELRLI 1062 (1075)
Q Consensus 994 SgGQrQrlaiARAlL------r~p~ILiLDEATSalD~~~e~~i~~~~~----~~~~TvI~IaHRls~i-~~~~~~l~l~ 1062 (1075)
|||||||++|||||+ ++|++|||||||++||..+...+.+.++ ..+.|||+|+|+++.+ ++.|+++.|.
T Consensus 136 SgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~ 215 (258)
T PRK13548 136 SGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLH 215 (258)
T ss_pred CHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEE
Confidence 999999999999999 5999999999999999999887776654 3478999999999866 5899999997
Q ss_pred cCC
Q 001446 1063 DGE 1065 (1075)
Q Consensus 1063 ~g~ 1065 (1075)
+|.
T Consensus 216 ~G~ 218 (258)
T PRK13548 216 QGR 218 (258)
T ss_pred CCE
Confidence 664
No 486
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.7e-35 Score=302.05 Aligned_cols=171 Identities=25% Similarity=0.409 Sum_probs=148.3
Q ss_pred cEEEEeEEEEcCC---CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCC--CCCccEEEeCCcC--ccccccEE
Q 001446 181 YIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLW--PLVSGHIAKPGVG--SDLNKEIF 253 (1075)
Q Consensus 181 ~i~~~~v~~~~~~---~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~--~~~~G~i~~~~~~--~~~~~~i~ 253 (1075)
.++++|+++.|++ ++++++|+||++++||+++|+||||||||||+++|+|+. +|++|+|.++|.+ ...++.++
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~~~~~~~i~ 82 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLDKNFQRSTG 82 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehHHHhhhceE
Confidence 5889999999974 267999999999999999999999999999999999986 4899999999865 33456899
Q ss_pred EEcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHcC
Q 001446 254 YVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 332 (1075)
Q Consensus 254 ~v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~~ 332 (1075)
|++|++.++. .|++||+.++. .++ +||||||||++||||++.
T Consensus 83 ~~~q~~~~~~~~tv~~~l~~~~----------------~~~---------------------~LSgGe~qrv~la~al~~ 125 (192)
T cd03232 83 YVEQQDVHSPNLTVREALRFSA----------------LLR---------------------GLSVEQRKRLTIGVELAA 125 (192)
T ss_pred EecccCccccCCcHHHHHHHHH----------------HHh---------------------cCCHHHhHHHHHHHHHhc
Confidence 9999998776 49999997531 000 599999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhh--HhhCCeEEEEcCCC
Q 001446 333 KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPAL--VAFHDVVLSLDGEG 388 (1075)
Q Consensus 333 ~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~--~~~~d~i~~l~~~g 388 (1075)
+|+++||||||++||+.+...+.+.+++ .++|+|++||+++. ...+|++++|+++|
T Consensus 126 ~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g 186 (192)
T cd03232 126 KPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGG 186 (192)
T ss_pred CCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCC
Confidence 9999999999999999999999888764 48999999999973 56899999998633
No 487
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-35 Score=317.04 Aligned_cols=210 Identities=18% Similarity=0.230 Sum_probs=163.6
Q ss_pred CCceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCC--C---CCCeEecCCCCCccc----
Q 001446 834 QDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP--V---VSGSLTKPSQHIDEE---- 904 (1075)
Q Consensus 834 ~g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~--~---~sG~I~idg~di~~~---- 904 (1075)
.|.|+++|+++.|++ .++|+|+||+|+|||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++...
T Consensus 2 ~~~l~~~nl~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 80 (252)
T PRK14256 2 NNKVKLEQLNVHFGK-NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDP 80 (252)
T ss_pred CcEEEEEEEEEEeCC-eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCCh
Confidence 467999999999974 579999999999999999999999999999999999986 3 589999999988642
Q ss_pred cCCcCcEEEEcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCC
Q 001446 905 AGSGCGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGW 983 (1075)
Q Consensus 905 ~~~r~~i~~VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gl 983 (1075)
...|.+++|+||+|.+|. .|+++|+.++..... . . .....++.+.++++.+++...+... +
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~----------~---~--~~~~~~~~~~~~l~~~~l~~~~~~~---~ 142 (252)
T PRK14256 81 VSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG----------R---V--NRSEADEIVESSLKRVALWDEVKDR---L 142 (252)
T ss_pred HHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC----------C---C--CHHHHHHHHHHHHHHcCCchhhhHH---h
Confidence 234667999999999998 599999975321000 0 0 0000123345566666653322110 0
Q ss_pred ccccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCch-hhccceEE
Q 001446 984 DANLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELR 1060 (1075)
Q Consensus 984 dt~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i-~~~~~~l~ 1060 (1075)
+ .....||+|||||++||||++++|++|||||||++||..+...+.+.+++ .+.|+|+|+|+++.+ ++.|+++.
T Consensus 143 ~---~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~ 219 (252)
T PRK14256 143 K---SNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAF 219 (252)
T ss_pred h---CCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEE
Confidence 1 12356999999999999999999999999999999999999888777654 368999999999865 78999999
Q ss_pred EEcCC
Q 001446 1061 LIDGE 1065 (1075)
Q Consensus 1061 l~~g~ 1065 (1075)
|.+|.
T Consensus 220 l~~G~ 224 (252)
T PRK14256 220 FYMGD 224 (252)
T ss_pred EECCE
Confidence 97664
No 488
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-35 Score=303.90 Aligned_cols=204 Identities=23% Similarity=0.296 Sum_probs=167.1
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCC---CCccccCCcCcEEE
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQ---HIDEEAGSGCGIFY 913 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~---di~~~~~~r~~i~~ 913 (1075)
|..+|++..++. .++++|||++|+.||.+|+.||||||||||+++|.|+-.|++|+|.++|. |.+.+.....+||+
T Consensus 3 i~i~~~~~~~~~-~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~VGf 81 (345)
T COG1118 3 IRINNVKKRFGA-FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRKVGF 81 (345)
T ss_pred eeehhhhhhccc-ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcceeE
Confidence 566676666653 46889999999999999999999999999999999999999999999999 77776544557999
Q ss_pred EcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccC
Q 001446 914 VPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 992 (1075)
Q Consensus 914 VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~ 992 (1075)
|.|+.-||. .||.+||.|+...... .-.+......+.+.|+-++|..+-++- ..+
T Consensus 82 vFQ~YALF~HmtVa~NIAFGl~~~~~--------------~p~~~~~r~rv~elL~lvqL~~la~ry----------P~Q 137 (345)
T COG1118 82 VFQHYALFPHMTVADNIAFGLKVRKE--------------RPSEAEIRARVEELLRLVQLEGLADRY----------PAQ 137 (345)
T ss_pred EEechhhcccchHHhhhhhccccccc--------------CCChhhHHHHHHHHHHHhcccchhhcC----------chh
Confidence 999999986 7999999997631100 000112245667778888886655443 367
Q ss_pred CChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCC-chhhccceEEEEcCC
Q 001446 993 LSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPA-LIPFHSLELRLIDGE 1065 (1075)
Q Consensus 993 LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls-~i~~~~~~l~l~~g~ 1065 (1075)
||||||||+|+||||..+|++|+||||-+|||....+.+++.+++ .|+|++.|+|..+ ..+..|++++|++|.
T Consensus 138 LSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~ 215 (345)
T COG1118 138 LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGR 215 (345)
T ss_pred cChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCe
Confidence 999999999999999999999999999999999988777665543 5999999999995 889999999998874
No 489
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-35 Score=321.68 Aligned_cols=209 Identities=23% Similarity=0.243 Sum_probs=164.6
Q ss_pred CceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCC-----CCCCeEecCCCCCccc----c
Q 001446 835 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP-----VVSGSLTKPSQHIDEE----A 905 (1075)
Q Consensus 835 g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~-----~~sG~I~idg~di~~~----~ 905 (1075)
..|+++||+++|++ +++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++... .
T Consensus 19 ~~l~~~nl~~~~~~-~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 97 (267)
T PRK14237 19 IALSTKDLHVYYGK-KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVY 97 (267)
T ss_pred eEEEEeeEEEEECC-eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChH
Confidence 36999999999964 679999999999999999999999999999999999996 4799999999988542 2
Q ss_pred CCcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcc
Q 001446 906 GSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 985 (1075)
Q Consensus 906 ~~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt 985 (1075)
..|.+++||||+|.+|.+|+++|+.++.... +.. .....++.+.++++.++|...+... ++
T Consensus 98 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~----------~~~-----~~~~~~~~~~~~l~~~~l~~~i~~~---~~- 158 (267)
T PRK14237 98 EMRKHIGMVFQRPNPFAKSIYENITFALERA----------GVK-----DKKVLDEIVETSLKQAALWDQVKDD---LH- 158 (267)
T ss_pred HHhcceEEEecCCccccccHHHHHHhHHHhc----------CCC-----CHHHHHHHHHHHHHHcCCCchhhhh---hc-
Confidence 3466799999999999999999997642100 000 0000123455666776664222110 11
Q ss_pred ccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCch-hhccceEEEE
Q 001446 986 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLI 1062 (1075)
Q Consensus 986 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i-~~~~~~l~l~ 1062 (1075)
.....||+|||||+|||||++++|++|||||||++||..+...+.+++++ .+.|+|+|+|+++.+ ++.|+++.|.
T Consensus 159 --~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~ 236 (267)
T PRK14237 159 --KSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFY 236 (267)
T ss_pred --CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEE
Confidence 12357999999999999999999999999999999999999888777654 478999999999765 7899999997
Q ss_pred cCC
Q 001446 1063 DGE 1065 (1075)
Q Consensus 1063 ~g~ 1065 (1075)
+|.
T Consensus 237 ~G~ 239 (267)
T PRK14237 237 LGD 239 (267)
T ss_pred CCE
Confidence 764
No 490
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=8.9e-35 Score=299.76 Aligned_cols=161 Identities=27% Similarity=0.372 Sum_probs=142.7
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcCc-------cccccEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIF 253 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~~-------~~~~~i~ 253 (1075)
.++++|+++.| +++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..+++++
T Consensus 4 ~l~~~~l~~~~-----~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (182)
T cd03215 4 VLEVRGLSVKG-----AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGIA 78 (182)
T ss_pred EEEEeccEEEe-----eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCeE
Confidence 58999999987 89999999999999999999999999999999999999999999998541 1356799
Q ss_pred EEcCCC---C-CCcCCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHH
Q 001446 254 YVPQRP---Y-TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 329 (1075)
Q Consensus 254 ~v~Q~~---~-~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAra 329 (1075)
|+||++ . ++..|++||+.++.. ||||||||++||||
T Consensus 79 ~~~q~~~~~~~~~~~t~~e~l~~~~~----------------------------------------LS~G~~qrl~la~a 118 (182)
T cd03215 79 YVPEDRKREGLVLDLSVAENIALSSL----------------------------------------LSGGNQQKVVLARW 118 (182)
T ss_pred EecCCcccCcccCCCcHHHHHHHHhh----------------------------------------cCHHHHHHHHHHHH
Confidence 999985 2 344699999876310 89999999999999
Q ss_pred HcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 330 FYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 330 l~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
++.+|+++||||||++||+.+++.+.+.+++ .++|+|++||+++.+. .||++++|++
T Consensus 119 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~ 179 (182)
T cd03215 119 LARDPRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYE 179 (182)
T ss_pred HccCCCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecC
Confidence 9999999999999999999999999887764 3789999999998775 5999999975
No 491
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-35 Score=321.44 Aligned_cols=204 Identities=22% Similarity=0.270 Sum_probs=163.8
Q ss_pred ceEEeeeeeeCCCc-cccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEE
Q 001446 836 SISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIF 912 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~-~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~ 912 (1075)
.|+++|+++.|++. +++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++...+ ..|.+++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 48999999999764 56999999999999999999999999999999999999999999999999887542 3456799
Q ss_pred EEcCCCC--CCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccc
Q 001446 913 YVPQRPY--TCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 990 (1075)
Q Consensus 913 ~VpQdP~--Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g 990 (1075)
||||+|. ++..|+++|+.++.... +. .....++.+.++++.+++.+.... ..
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~----------~~ 140 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENH----------AV------PYDEMHRRVSEALKQVDMLERADY----------EP 140 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhc----------CC------CHHHHHHHHHHHHHHcCCchhhhC----------Cc
Confidence 9999994 44568999997642100 00 000012345566777776443322 13
Q ss_pred cCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCchhhccceEEEEcCC
Q 001446 991 DILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRLIDGE 1065 (1075)
Q Consensus 991 ~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~i~~~~~~l~l~~g~ 1065 (1075)
..||+|||||++||||++++|++|||||||++||..+...+.+.+++ .++|+|+|+|+++.+...|+++.|.+|.
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~ 219 (269)
T PRK13648 141 NALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGT 219 (269)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCE
Confidence 56999999999999999999999999999999999999888776643 3789999999998887899999997664
No 492
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=8.9e-35 Score=302.62 Aligned_cols=169 Identities=31% Similarity=0.452 Sum_probs=148.2
Q ss_pred cEEEEeEEEEcCC-----CCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCC--CCCccEEEeCCcCc---cccc
Q 001446 181 YIEFSGVKVVTPT-----GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLW--PLVSGHIAKPGVGS---DLNK 250 (1075)
Q Consensus 181 ~i~~~~v~~~~~~-----~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~--~~~~G~i~~~~~~~---~~~~ 250 (1075)
.++++|+++.|++ ++++++|+||++++||+++|+||||||||||+++|+|++ +|++|+|.++|.+. ..++
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~ 82 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDKRSFRK 82 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCchHhhhh
Confidence 4899999999975 367999999999999999999999999999999999999 99999999998652 3467
Q ss_pred cEEEEcCCCCCCc-CCHHHHhcCCCCCCcccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHH
Q 001446 251 EIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 329 (1075)
Q Consensus 251 ~i~~v~Q~~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAra 329 (1075)
.++|+||++.++. .|++||+.++.. + ..||||||||++||||
T Consensus 83 ~i~~~~q~~~~~~~~t~~~~i~~~~~----------------~---------------------~~LS~G~~qrv~lara 125 (194)
T cd03213 83 IIGYVPQDDILHPTLTVRETLMFAAK----------------L---------------------RGLSGGERKRVSIALE 125 (194)
T ss_pred eEEEccCcccCCCCCcHHHHHHHHHH----------------h---------------------ccCCHHHHHHHHHHHH
Confidence 8999999998776 599999865310 0 0599999999999999
Q ss_pred HcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh---cCCeEEEEecChh-hH-hhCCeEEEEcC
Q 001446 330 FYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPA-LV-AFHDVVLSLDG 386 (1075)
Q Consensus 330 l~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~t~i~vtH~~~-~~-~~~d~i~~l~~ 386 (1075)
|+.+|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++ .+ ..+|++++|++
T Consensus 126 l~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~ 187 (194)
T cd03213 126 LVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ 187 (194)
T ss_pred HHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC
Confidence 9999999999999999999999999887764 4889999999986 44 57999999986
No 493
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-35 Score=318.27 Aligned_cols=208 Identities=20% Similarity=0.223 Sum_probs=162.1
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCC-----CCCCeEecCCCCCccc----cC
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP-----VVSGSLTKPSQHIDEE----AG 906 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~-----~~sG~I~idg~di~~~----~~ 906 (1075)
.|+++||+++|++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++ |.+|+|.+||.++... ..
T Consensus 4 ~l~~~~l~~~~~~-~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~ 82 (251)
T PRK14251 4 IISAKDVHLSYGN-YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVE 82 (251)
T ss_pred eEEEEeeEEEECC-eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHH
Confidence 4899999999975 579999999999999999999999999999999999997 4799999999987532 23
Q ss_pred CcCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccc
Q 001446 907 SGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 986 (1075)
Q Consensus 907 ~r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~ 986 (1075)
.|..++|+||+|.+|++|+++|+.++.... +.. .....+..+.++++.++++.... ..++.
T Consensus 83 ~~~~i~~~~q~~~~~~~tv~enl~~~~~~~----------~~~-----~~~~~~~~~~~~l~~~~l~~~~~---~~~~~- 143 (251)
T PRK14251 83 LRKEVGMVFQQPTPFPFSVYDNVAYGLKIA----------GVK-----DKELIDQRVEESLKQAAIWKETK---DNLDR- 143 (251)
T ss_pred hhccEEEEecCCccCCCcHHHHHHHHHHHc----------CCC-----CHHHHHHHHHHHHHHcCCCcchH---HHhcc-
Confidence 456799999999999999999997542100 000 00001233445566666532110 11121
Q ss_pred cccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCc-hhhccceEEEEc
Q 001446 987 LNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPAL-IPFHSLELRLID 1063 (1075)
Q Consensus 987 ~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~-i~~~~~~l~l~~ 1063 (1075)
....||||||||++||||++++|+++||||||++||.++...+.+.+++ .+.|+|+|+|+++. .++.|+++.|.+
T Consensus 144 --~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~ 221 (251)
T PRK14251 144 --NAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMN 221 (251)
T ss_pred --ChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEEC
Confidence 2357999999999999999999999999999999999999888777654 37899999999986 567999999976
Q ss_pred CC
Q 001446 1064 GE 1065 (1075)
Q Consensus 1064 g~ 1065 (1075)
|.
T Consensus 222 G~ 223 (251)
T PRK14251 222 GD 223 (251)
T ss_pred CE
Confidence 65
No 494
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-35 Score=318.72 Aligned_cols=209 Identities=22% Similarity=0.227 Sum_probs=162.3
Q ss_pred ceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCC-----CCCeEecCCCCCc--cc--cC
Q 001446 836 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPV-----VSGSLTKPSQHID--EE--AG 906 (1075)
Q Consensus 836 ~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~-----~sG~I~idg~di~--~~--~~ 906 (1075)
.|+++||+++|++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++| .+|+|.+||.++. .. ..
T Consensus 4 ~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 82 (253)
T PRK14267 4 AIETVNLRVYYGS-NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIE 82 (253)
T ss_pred eEEEEeEEEEeCC-eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHH
Confidence 4899999999975 5699999999999999999999999999999999999987 4999999999886 22 23
Q ss_pred CcCcEEEEcCCCCCCCc-chhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcc
Q 001446 907 SGCGIFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 985 (1075)
Q Consensus 907 ~r~~i~~VpQdP~Lf~g-Tir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt 985 (1075)
.|.+++|+||+|.+|++ |+++|+.++..... .. ......+..+.++++.+++...+.. .++.
T Consensus 83 ~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~----------~~----~~~~~~~~~~~~~l~~~~l~~~~~~---~~~~ 145 (253)
T PRK14267 83 VRREVGMVFQYPNPFPHLTIYDNVAIGVKLNG----------LV----KSKKELDERVEWALKKAALWDEVKD---RLND 145 (253)
T ss_pred HhhceeEEecCCccCCCCcHHHHHHHHHHhcC----------cc----CCHHHHHHHHHHHHHHcCCccchhh---hhcc
Confidence 45679999999999976 99999975311000 00 0000012334556666665322110 0111
Q ss_pred ccccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCc-hhhccceEEEE
Q 001446 986 NLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPAL-IPFHSLELRLI 1062 (1075)
Q Consensus 986 ~~~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~-i~~~~~~l~l~ 1062 (1075)
....||||||||++||||++++|++|||||||++||.++...+.+.+++ .++|+|+|+|+++. ..+.|+++.|.
T Consensus 146 ---~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~ 222 (253)
T PRK14267 146 ---YPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLY 222 (253)
T ss_pred ---ChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEE
Confidence 2356999999999999999999999999999999999999888777654 36899999999986 46899999998
Q ss_pred cCC
Q 001446 1063 DGE 1065 (1075)
Q Consensus 1063 ~g~ 1065 (1075)
+|.
T Consensus 223 ~G~ 225 (253)
T PRK14267 223 LGK 225 (253)
T ss_pred CCE
Confidence 775
No 495
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=5.7e-35 Score=306.28 Aligned_cols=191 Identities=20% Similarity=0.276 Sum_probs=155.7
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccc-cCCcCcEEEEc
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYVP 915 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~-~~~r~~i~~Vp 915 (1075)
|+++||++.|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...|.+++|+|
T Consensus 2 l~~~~l~~~~~~-~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~i~~~~ 80 (200)
T PRK13540 2 LDVIELDFDYHD-QPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKKDLCTYQKQLCFVG 80 (200)
T ss_pred EEEEEEEEEeCC-eeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCccccCHHHHHhheEEec
Confidence 679999999975 5699999999999999999999999999999999999999999999999988643 23456799999
Q ss_pred CCCCCC-CcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCccccccccCCC
Q 001446 916 QRPYTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 994 (1075)
Q Consensus 916 QdP~Lf-~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~~LS 994 (1075)
|+|.++ ..|+++|+.++..... .+..+.++++.+++.+..+. . ...||
T Consensus 81 q~~~~~~~~tv~~~~~~~~~~~~---------------------~~~~~~~~l~~~~l~~~~~~-------~---~~~LS 129 (200)
T PRK13540 81 HRSGINPYLTLRENCLYDIHFSP---------------------GAVGITELCRLFSLEHLIDY-------P---CGLLS 129 (200)
T ss_pred cccccCcCCCHHHHHHHHHhcCc---------------------chHHHHHHHHHcCCchhhhC-------C---hhhcC
Confidence 999987 5799999975321000 01234556666665332211 1 23599
Q ss_pred hhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCchhhccceE
Q 001446 995 LGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPALIPFHSLEL 1059 (1075)
Q Consensus 995 gGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~---~~~TvI~IaHRls~i~~~~~~l 1059 (1075)
+|||||++||||++++|++|||||||++||..+...+.+.+++ .++|+|+|+|+...++-.|+..
T Consensus 130 ~G~~~rv~laral~~~p~~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~ 197 (200)
T PRK13540 130 SGQKRQVALLRLWMSKAKLWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEE 197 (200)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhh
Confidence 9999999999999999999999999999999999888777653 4899999999998887777654
No 496
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-35 Score=318.24 Aligned_cols=208 Identities=21% Similarity=0.211 Sum_probs=162.5
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCC-----CCCCeEecCCCCCcccc----CC
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP-----VVSGSLTKPSQHIDEEA----GS 907 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~-----~~sG~I~idg~di~~~~----~~ 907 (1075)
-+++||++.|++ +++|+|+||+|+|||.++|+|+||||||||+++|.|+++ |.+|+|.++|.++...+ ..
T Consensus 6 ~~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 84 (251)
T PRK14244 6 ASVKNLNLWYGS-KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLL 84 (251)
T ss_pred EEeeeEEEEECC-eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHH
Confidence 368999999863 579999999999999999999999999999999999986 46999999999886542 24
Q ss_pred cCcEEEEcCCCCCCCcchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccc
Q 001446 908 GCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 987 (1075)
Q Consensus 908 r~~i~~VpQdP~Lf~gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~ 987 (1075)
|.+++||||+|.+|++|+++|+.++....+ ... .....+..+.++++.+++...+... ++
T Consensus 85 ~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~----------~~~----~~~~~~~~~~~~l~~~~l~~~~~~~---~~--- 144 (251)
T PRK14244 85 RAKVGMVFQKPNPFPKSIYDNVAYGPKLHG----------LAK----NKKKLDEIVEKSLTSVGLWEELGDR---LK--- 144 (251)
T ss_pred hhhEEEEecCcccccCCHHHHHHHHHHhcC----------CCC----CHHHHHHHHHHHHHHcCCCchhhhH---hh---
Confidence 667999999999999999999975310000 000 0001123455667777764311100 01
Q ss_pred ccccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCch-hhccceEEEEcC
Q 001446 988 NWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLIDG 1064 (1075)
Q Consensus 988 ~~g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~--~~~TvI~IaHRls~i-~~~~~~l~l~~g 1064 (1075)
.....||||||||++||||++++|+||||||||++||..+...+.+.+++ .++|+|+|+|++..+ ++.|+++.|.+|
T Consensus 145 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G 224 (251)
T PRK14244 145 DSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSG 224 (251)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECC
Confidence 12356999999999999999999999999999999999999888877654 479999999999875 579999999776
Q ss_pred C
Q 001446 1065 E 1065 (1075)
Q Consensus 1065 ~ 1065 (1075)
.
T Consensus 225 ~ 225 (251)
T PRK14244 225 R 225 (251)
T ss_pred E
Confidence 5
No 497
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-35 Score=319.03 Aligned_cols=208 Identities=21% Similarity=0.223 Sum_probs=166.0
Q ss_pred CceEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCcccc--CCcCcEE
Q 001446 835 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIF 912 (1075)
Q Consensus 835 g~I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~--~~r~~i~ 912 (1075)
-.|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|.|+++|.+|+|.++|.++...+ ..+.+++
T Consensus 6 ~~l~i~~l~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (265)
T PRK10253 6 ARLRGEQLTLGYGK-YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRIG 84 (265)
T ss_pred cEEEEEEEEEEECC-EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhheE
Confidence 46999999999975 56999999999999999999999999999999999999999999999999887642 2345799
Q ss_pred EEcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccccccc
Q 001446 913 YVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 991 (1075)
Q Consensus 913 ~VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~g~ 991 (1075)
|+||+|.+|. .|+++|+.++...... ......+..+..+.++++.++|.+...+. ..
T Consensus 85 ~v~q~~~~~~~~tv~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----------~~ 142 (265)
T PRK10253 85 LLAQNATTPGDITVQELVARGRYPHQP------------LFTRWRKEDEEAVTKAMQATGITHLADQS----------VD 142 (265)
T ss_pred EeeccCcCCCCCcHHHHHHhCcccccc------------cccCCCHHHHHHHHHHHHHcCCHHHhcCC----------cc
Confidence 9999999875 6999999754211000 00000001133456777777775443222 35
Q ss_pred CCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCC-chhhccceEEEEcCC
Q 001446 992 ILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPA-LIPFHSLELRLIDGE 1065 (1075)
Q Consensus 992 ~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls-~i~~~~~~l~l~~g~ 1065 (1075)
.||||||||++||||++++|++|||||||++||.++...+.+.+++ .++|+|+++|++. ..++.|+++.|.+|.
T Consensus 143 ~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~ 221 (265)
T PRK10253 143 TLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGK 221 (265)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999887776643 3889999999997 568999999997664
No 498
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=313.95 Aligned_cols=201 Identities=23% Similarity=0.255 Sum_probs=162.7
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCC-----CCccEEEeCCcCc--------c
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS--------D 247 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~-----~~~G~i~~~~~~~--------~ 247 (1075)
.++++||++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|.+. .
T Consensus 3 ~l~~~~v~~~~~-~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~ 81 (250)
T PRK14266 3 RIEVENLNTYFD-DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVVE 81 (250)
T ss_pred EEEEEeEEEEeC-CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHHH
Confidence 478999999986 4679999999999999999999999999999999999864 4899999999641 2
Q ss_pred ccccEEEEcCCCCCCcCCHHHHhcCCCCCCccc-CcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHH
Q 001446 248 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 326 (1075)
Q Consensus 248 ~~~~i~~v~Q~~~~~~~tv~~ni~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~l 326 (1075)
.+++++|+||+|.++..|++||+.++....... .....+++.++++.+++.+.+.... ......||||||||++|
T Consensus 82 ~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~----~~~~~~LS~Gq~qrv~l 157 (250)
T PRK14266 82 LRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDKL----DKSALGLSGGQQQRLCI 157 (250)
T ss_pred HhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHHH----hCCcccCCHHHHHHHHH
Confidence 356799999999988889999998753211110 1112345677888888854322110 01136899999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHh--cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 327 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 327 Aral~~~p~illLDEpts~LD~~~~~~i~~~l~~--~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
||||+++|+++||||||++||+.+...+.+.+++ .+.|+|++||+++.+. .+|+++++++
T Consensus 158 aral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~ 220 (250)
T PRK14266 158 ARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLN 220 (250)
T ss_pred HHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEEC
Confidence 9999999999999999999999999999888764 3789999999998775 6899999975
No 499
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-35 Score=286.60 Aligned_cols=197 Identities=24% Similarity=0.364 Sum_probs=173.7
Q ss_pred cEEEEeEEEEcCCCCeeeeeceEEEeCCCEEEEEcCCcchHHHHHHHHhCCCCCCccEEEeCCcC------ccccccEEE
Q 001446 181 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 254 (1075)
Q Consensus 181 ~i~~~~v~~~~~~~~~~l~~i~l~i~~g~~~~i~G~~GsGKSTLl~~l~g~~~~~~G~i~~~~~~------~~~~~~i~~ 254 (1075)
+++++||++.|. ++.+++++|++|++|.+++|+||||+||||||.+++++.++++|+|.++|.+ .++.++++.
T Consensus 1 MI~i~nv~K~y~-~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d~G~i~i~g~~~~~~~s~~LAk~lSI 79 (252)
T COG4604 1 MITIENVSKSYG-TKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKDSGEITIDGLELTSTPSKELAKKLSI 79 (252)
T ss_pred CeeehhhhHhhC-CEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhccccCceEEEeeeecccCChHHHHHHHHH
Confidence 478899999984 6789999999999999999999999999999999999999999999999975 356778999
Q ss_pred EcCCCCCCc-CCHHHHhcCCCCCCc--ccCcCCHHHHHHHHHHcCChhHHhcCCCCcccCCCCCCChhHHHHHHHHHHHc
Q 001446 255 VPQRPYTAV-GTLRDQLIYPLTSDQ--EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 331 (1075)
Q Consensus 255 v~Q~~~~~~-~tv~~ni~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~g~~LSgGqkqRl~lAral~ 331 (1075)
+-|+..+.. -||+|-+.||..... .....++..+.++++.++|.++.+++- .+||||||||.-+|..++
T Consensus 80 LkQ~N~i~~rlTV~dLv~FGRfPYSqGRlt~eD~~~I~~aieyl~L~~l~dryL--------d~LSGGQrQRAfIAMVla 151 (252)
T COG4604 80 LKQENHINSRLTVRDLVGFGRFPYSQGRLTKEDRRIINEAIEYLHLEDLSDRYL--------DELSGGQRQRAFIAMVLA 151 (252)
T ss_pred HHhhchhhheeEHHHHhhcCCCcccCCCCchHHHHHHHHHHHHhcccchHHHhH--------Hhcccchhhhhhhheeee
Confidence 999887654 599999999865432 223445667889999999999999875 589999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCCeEEEEecChhhHh-hCCeEEEEcC
Q 001446 332 HKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 386 (1075)
Q Consensus 332 ~~p~illLDEpts~LD~~~~~~i~~~l~~----~~~t~i~vtH~~~~~~-~~d~i~~l~~ 386 (1075)
.+.+.++||||.++||......+++.+++ .|+|+|+|-||.++.+ ++|+|+.|.+
T Consensus 152 QdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINfAS~YsD~IVAlK~ 211 (252)
T COG4604 152 QDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINFASCYSDHIVALKN 211 (252)
T ss_pred ccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccHHHhhhhheeeecC
Confidence 99999999999999999999888887763 5999999999999985 7999999986
No 500
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-35 Score=331.14 Aligned_cols=202 Identities=21% Similarity=0.176 Sum_probs=159.8
Q ss_pred eEEeeeeeeCCCccccccccceeecCCCeEEEEcCCCCcHHHHHHHHhCCCCCCCCeEecCCCCCccccC------CcCc
Q 001446 837 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAG------SGCG 910 (1075)
Q Consensus 837 I~f~~V~~~yp~~~~vL~~vs~~I~~Ge~vaIvG~SGsGKSTL~~lL~Rl~~~~sG~I~idg~di~~~~~------~r~~ 910 (1075)
+++++|.-.|. ..++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++...+. .|.+
T Consensus 29 ~~~~~~~~~~~-~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~ 107 (400)
T PRK10070 29 LSKEQILEKTG-LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKK 107 (400)
T ss_pred ccHHHHHhhcC-CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCC
Confidence 44555544442 3358999999999999999999999999999999999999999999999999876521 2457
Q ss_pred EEEEcCCCCCCC-cchhhhhcCCCChHHHHHHHhhhcCCCcccccccccchHHHHHHHHhCCchhhhhhhccCCcccccc
Q 001446 911 IFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNW 989 (1075)
Q Consensus 911 i~~VpQdP~Lf~-gTir~NL~~p~~~~~~~~~a~~~~~~~~~~~~~~~~~d~~i~~~l~~~~L~~~i~~~~~Gldt~~~~ 989 (1075)
++||||+|.+|+ .|+++|+.++... .+.. ....++.+.++++.++|.+...+.
T Consensus 108 igyv~Q~~~l~~~~Tv~enl~~~~~~----------~~~~------~~~~~~~~~e~L~~~gL~~~~~~~---------- 161 (400)
T PRK10070 108 IAMVFQSFALMPHMTVLDNTAFGMEL----------AGIN------AEERREKALDALRQVGLENYAHSY---------- 161 (400)
T ss_pred EEEEECCCcCCCCCCHHHHHHHHHHh----------cCCC------HHHHHHHHHHHHHHcCCChhhhcC----------
Confidence 999999999997 4999999864210 0000 000123456677888875544333
Q ss_pred ccCCChhHHHHHHHHHHhhcCCCEeEeeccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCc-hhhccceEEEEcC
Q 001446 990 EDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPAL-IPFHSLELRLIDG 1064 (1075)
Q Consensus 990 g~~LSgGQrQrlaiARAlLr~p~ILiLDEATSalD~~~e~~i~~~~~~----~~~TvI~IaHRls~-i~~~~~~l~l~~g 1064 (1075)
...||||||||++|||||+++|+|||||||||+||+.+...+++.+.+ .++|+|+|+|+++. .++.|+++.|.+|
T Consensus 162 ~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G 241 (400)
T PRK10070 162 PDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNG 241 (400)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECC
Confidence 246999999999999999999999999999999999999888776642 48999999999975 5789999999776
Q ss_pred C
Q 001446 1065 E 1065 (1075)
Q Consensus 1065 ~ 1065 (1075)
.
T Consensus 242 ~ 242 (400)
T PRK10070 242 E 242 (400)
T ss_pred E
Confidence 4
Done!