Query 001449
Match_columns 1075
No_of_seqs 425 out of 2597
Neff 4.9
Searched_HMMs 29240
Date Tue Mar 26 16:07:20 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001449.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_751-754//hhsearch_pdb/001449hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9d_A Serine/threonine-protei 1.0 1 1 407.3 22.8 251 798-1063 22-276 (350)
2 4fie_A Serine/threonine-protei 1.0 1 1 403.1 26.1 247 799-1063 150-400 (423)
3 4g3f_A NF-kappa-beta-inducing 1.0 1 1 402.2 21.4 253 799-1073 57-319 (336)
4 3omv_A RAF proto-oncogene seri 1.0 1 1 401.4 27.5 268 791-1072 27-302 (307)
5 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 401.1 20.7 250 798-1063 30-284 (311)
6 4fih_A Serine/threonine-protei 1.0 1 1 401.0 24.6 247 799-1063 73-323 (346)
7 4asz_A BDNF/NT-3 growth factor 1.0 1 1 400.4 25.4 261 794-1071 7-290 (299)
8 4aoj_A High affinity nerve gro 1.0 1 1 399.8 29.8 261 794-1071 35-320 (329)
9 4ase_A Vascular endothelial gr 1.0 1 1 396.0 23.3 263 795-1071 59-348 (353)
10 3ubd_A Ribosomal protein S6 ki 1.0 1 1 394.1 18.7 251 796-1063 20-281 (304)
No 1
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=407.28 Aligned_cols=251 Identities=22% Similarity=0.435 Sum_probs=221.1
Q ss_pred CCCCEEEEEEECCCCCEEEEEEEEC--CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
Q ss_conf 4889049999732593899999986--93259998204334899346899999999999999818999543560111249
Q 001449 798 KNDDLEEVRELGSGTYGSVYHGKWR--GSDVAIKRIKASCFAGKPSERERLIADFWKEALLLSSLHHPNVVSFYGIVRDG 875 (1075)
Q Consensus 798 ~~~dYeilk~LGeGsfGtVYkak~k--Gt~VAIKvIk~~~~~~~~~e~e~~i~~flrEi~ILkkL~HPNIVkLlgv~~e~ 875 (1075)
..++|++++.||+|+||+||+++++ ++.||||++.+.... ....+.+.+|+.+|+.++|||||++++++.+
T Consensus 22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~------~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~- 94 (350)
T 4b9d_A 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS------SKEREESRREVAVLANMKHPNIVQYRESFEE- 94 (350)
T ss_dssp CCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC------HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-
T ss_pred CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCC------HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE-
T ss_conf 512558847970277939999998899989999998658789------7999999999999987799898919999998-
Q ss_pred CCCCEEEEEEEECCCCHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCEEEEEEC
Q ss_conf 9995289996502884789873104-667899999999999999999984991503578886575268999991999425
Q 001449 876 PDGSLATVTEFMVNGSLKQFLQKKD-RTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDL 954 (1075)
Q Consensus 876 ~e~~L~LVmEYleGGSL~dlLkk~~-k~Lse~~il~Ia~QIlsAL~yLHs~GIVHRDIKPeNILId~~~~~~g~VKLiDF 954 (1075)
++.+|+|||||+||+|.++|.... ..+++..++.|+.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 95 -~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~----~~g~vKl~DF 169 (350)
T 4b9d_A 95 -NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT----KDGTVQLGDF 169 (350)
T ss_dssp -TTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEEC----TTCCEEECST
T ss_pred -CCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEEC----CCCCEEECCC
T ss_conf -99999999488998399999973899997899999999999999999989915135978997987----8999897646
Q ss_pred CCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 885123454-3247877888744720015887899923569999999999991999998878578997665145899999
Q 001449 955 GLSKVKQQT-LVSGGVRGTLPWMAPELLSGKSHMVTEKIDVYSFGIVMWELLTGDEPYADMHCASIIGGIVNNTLRPQIP 1033 (1075)
Q Consensus 955 GLAk~~~~~-~~s~s~~GTp~YlAPEvL~g~~~~yS~KsDIWSLGVILyELLTGk~PF~~~~~~eil~~Iv~~~l~~~ip 1033 (1075)
|+|+..... ......+||+.|+|||++.+.. |+.++|||||||++|||++|+.||.+.+..+++..+..... +.++
T Consensus 170 Gla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~--y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-~~~~ 246 (350)
T 4b9d_A 170 GIARVLNSTVELARACIGTPYYLSPEICENKP--YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF-PPVS 246 (350)
T ss_dssp TEESCCCHHHHHHHHHHSCCTTCCHHHHTTCC--CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-CCCC
T ss_pred CCCEEECCCCCCCCCCCCCCCCCCHHHHCCCC--CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC-CCCC
T ss_conf 52144068854101457883603999987999--89599999999999999978799899699999999980899-9997
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf 989899999999962119999988999999
Q 001449 1034 SWCDPEWRSLMESCWASDPAERPSFSEISR 1063 (1075)
Q Consensus 1034 ~~lS~eLkdLIkkCLq~DP~kRPSa~EILq 1063 (1075)
..++.++++||.+||..||.+|||+.++++
T Consensus 247 ~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 247 LHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf 557999999999985589667908999963
No 2
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=403.09 Aligned_cols=247 Identities=23% Similarity=0.413 Sum_probs=215.7
Q ss_pred CCCEEEEEEECCCCCEEEEEEEEC--CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf 889049999732593899999986--932599982043348993468999999999999998189995435601112499
Q 001449 799 NDDLEEVRELGSGTYGSVYHGKWR--GSDVAIKRIKASCFAGKPSERERLIADFWKEALLLSSLHHPNVVSFYGIVRDGP 876 (1075)
Q Consensus 799 ~~dYeilk~LGeGsfGtVYkak~k--Gt~VAIKvIk~~~~~~~~~e~e~~i~~flrEi~ILkkL~HPNIVkLlgv~~e~~ 876 (1075)
...|+++++||+|+||.||+|+++ |+.||||++....... .+.+.+|+.+|+.++|||||++++++.+
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~--------~~~~~~Ei~il~~l~HpnIV~l~~~~~~-- 219 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--------RELLFNEVVIMRDYQHENVVEMYNSYLV-- 219 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS--------GGGHHHHHHHHHHCCCTTBCCEEEEEEE--
T ss_pred HHHCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCHHH--------HHHHHHHHHHHHHCCCCCCCCEEEEEEE--
T ss_conf 684386169624818489999999999899999986255468--------9999999999985799898716899998--
Q ss_pred CCCEEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCEEEEEECCC
Q ss_conf 99528999650288478987310466789999999999999999998499150357888657526899999199942588
Q 001449 877 DGSLATVTEFMVNGSLKQFLQKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGL 956 (1075)
Q Consensus 877 e~~L~LVmEYleGGSL~dlLkk~~k~Lse~~il~Ia~QIlsAL~yLHs~GIVHRDIKPeNILId~~~~~~g~VKLiDFGL 956 (1075)
.+.+|+|||||+||+|.++++.. .+++..++.|+.||+.||.|||++||+||||||+||||+ .++.+||+|||+
T Consensus 220 ~~~~~iVmEy~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~----~~g~vKl~DFGl 293 (423)
T 4fie_A 220 GDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT----HDGRVKLSDFGF 293 (423)
T ss_dssp TTEEEEEEECCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEEC----TTCCEEECCCTT
T ss_pred CCEEEEEEECCCCCCHHHHHHCC--CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEC----CCCCEEEECCCC
T ss_conf 99999999698998289887616--989999999999999999999988904465787778985----899989803726
Q ss_pred CCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC-CCCCCC
Q ss_conf 512345-432478778887447200158878999235699999999999919999988785789976651458-999999
Q 001449 957 SKVKQQ-TLVSGGVRGTLPWMAPELLSGKSHMVTEKIDVYSFGIVMWELLTGDEPYADMHCASIIGGIVNNTL-RPQIPS 1034 (1075)
Q Consensus 957 Ak~~~~-~~~s~s~~GTp~YlAPEvL~g~~~~yS~KsDIWSLGVILyELLTGk~PF~~~~~~eil~~Iv~~~l-~~~ip~ 1034 (1075)
|+.... .......+||+.|||||++.+.. |+.++|||||||++|||++|+.||.+.+..+.+..+..... ......
T Consensus 294 a~~~~~~~~~~~~~~GTp~YmAPEvl~~~~--y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~ 371 (423)
T 4fie_A 294 CAQVSKEVPRRKSLVGTPYWMAPELISRLP--YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLH 371 (423)
T ss_dssp CEECCSSCCCBCCCEECTTTCCHHHHTTCC--BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTT
T ss_pred CEECCCCCCCCCCCCCCCCCCCHHHHCCCC--CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
T ss_conf 547778876434666474727999977999--996899999999999999787998986999999999727998876501
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf 89899999999962119999988999999
Q 001449 1035 WCDPEWRSLMESCWASDPAERPSFSEISR 1063 (1075)
Q Consensus 1035 ~lS~eLkdLIkkCLq~DP~kRPSa~EILq 1063 (1075)
.++.++++||.+||..||.+|+|+.|+++
T Consensus 372 ~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 372 KVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp SSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf 29999999999986789568909999960
No 3
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=402.18 Aligned_cols=253 Identities=25% Similarity=0.412 Sum_probs=220.0
Q ss_pred CCCEEEEEEECCCCCEEEEEEEEC--CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf 889049999732593899999986--932599982043348993468999999999999998189995435601112499
Q 001449 799 NDDLEEVRELGSGTYGSVYHGKWR--GSDVAIKRIKASCFAGKPSERERLIADFWKEALLLSSLHHPNVVSFYGIVRDGP 876 (1075)
Q Consensus 799 ~~dYeilk~LGeGsfGtVYkak~k--Gt~VAIKvIk~~~~~~~~~e~e~~i~~flrEi~ILkkL~HPNIVkLlgv~~e~~ 876 (1075)
...|++.++||+|+||.||+|+++ |..||||+++.... +.+|+.+++.++|||||++++++.+
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------------~~~E~~il~~l~HpnIV~l~~~~~~-- 121 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------------RVEELVACAGLSSPRIVPLYGAVRE-- 121 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------------CTHHHHTTTTCCCTTBCCEEEEEEE--
T ss_pred HHHEEECCEECCCCCEEEEEEEECCCCCEEEEEEECHHHH-------------HHHHHHHHHHCCCCCCCCEEEEEEE--
T ss_conf 3351768685138780999999889998999999788886-------------9999999985799899939999998--
Q ss_pred CCCEEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCC-EEEEEECC
Q ss_conf 99528999650288478987310466789999999999999999998499150357888657526899999-19994258
Q 001449 877 DGSLATVTEFMVNGSLKQFLQKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRP-VCKIGDLG 955 (1075)
Q Consensus 877 e~~L~LVmEYleGGSL~dlLkk~~k~Lse~~il~Ia~QIlsAL~yLHs~GIVHRDIKPeNILId~~~~~~g-~VKLiDFG 955 (1075)
.+.+|+|||||+||+|.++|++.+ .+++..++.|+.||+.||.|||+++|+||||||+|||++ .++ .+||+|||
T Consensus 122 ~~~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~----~~g~~vKl~DFG 196 (336)
T 4g3f_A 122 GPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLS----SDGSRAALCDFG 196 (336)
T ss_dssp TTEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEC----TTSCCEEECCCT
T ss_pred CCEEEEEEECCCCCCHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHEEEE----CCCCEEEEEECC
T ss_conf 999999996659986999998769-999999999999999999999988904261677887995----899979996278
Q ss_pred CCCCCCCCC------CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf 851234543------24787788874472001588789992356999999999999199999887857899766514589
Q 001449 956 LSKVKQQTL------VSGGVRGTLPWMAPELLSGKSHMVTEKIDVYSFGIVMWELLTGDEPYADMHCASIIGGIVNNTLR 1029 (1075)
Q Consensus 956 LAk~~~~~~------~s~s~~GTp~YlAPEvL~g~~~~yS~KsDIWSLGVILyELLTGk~PF~~~~~~eil~~Iv~~~l~ 1029 (1075)
+|+...... .....+||+.|+|||++.+.. |+.++|||||||++|||++|+.||.+.+...++..+......
T Consensus 197 la~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~--y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~ 274 (336)
T 4g3f_A 197 HALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP--CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPP 274 (336)
T ss_dssp TCEEC------------CCCCCCGGGCCHHHHTTCC--CCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCG
T ss_pred CCEECCCCCCCCCEECCCCCCCCCCCCCHHHHCCCC--CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC
T ss_conf 776856787654022178545580200899988999--890899999999999999786998998999999999808998
Q ss_pred -CCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf -99999898999999999621199999889999999999999708
Q 001449 1030 -PQIPSWCDPEWRSLMESCWASDPAERPSFSEISRRLRSMAAAIN 1073 (1075)
Q Consensus 1030 -~~ip~~lS~eLkdLIkkCLq~DP~kRPSa~EILq~Lesi~seLn 1073 (1075)
..++..+++++.+||.+||..||.+|||+.|+++.|..+..+++
T Consensus 275 ~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 275 IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred CHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 002586679999999999762897689599999999999975443
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=1.00 E-value=1 Score=401.41 Aligned_cols=268 Identities=31% Similarity=0.545 Sum_probs=225.7
Q ss_pred HHCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 83033114889049999732593899999986932599982043348993468999999999999998189995435601
Q 001449 791 ARGLQTIKNDDLEEVRELGSGTYGSVYHGKWRGSDVAIKRIKASCFAGKPSERERLIADFWKEALLLSSLHHPNVVSFYG 870 (1075)
Q Consensus 791 a~~~~ei~~~dYeilk~LGeGsfGtVYkak~kGt~VAIKvIk~~~~~~~~~e~e~~i~~flrEi~ILkkL~HPNIVkLlg 870 (1075)
....|++..+++++.++||+|+||+||+|++++ .||||+++.... .....+.|.+|+.+|++++|||||++++
T Consensus 27 ~~~~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~~------~~~~~~~f~~E~~il~~l~HpNIV~l~g 99 (307)
T 3omv_A 27 SSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDP------TPEQFQAFRNEVAVLRKTRHVNILLFMG 99 (307)
T ss_dssp --CCCBCCTTSCCEEEECCCCSSSEEEEEESSS-EEEEEECCCSSC------CHHHHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred CCCCCEECHHHEEEEEEEEECCCCEEEEEEECC-CEEEEEEEECCC------CHHHHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 886708747994984498208886899999899-689999972689------9999999999999998589988746999
Q ss_pred CCCCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCEEE
Q ss_conf 11249999528999650288478987310466789999999999999999998499150357888657526899999199
Q 001449 871 IVRDGPDGSLATVTEFMVNGSLKQFLQKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCK 950 (1075)
Q Consensus 871 v~~e~~e~~L~LVmEYleGGSL~dlLkk~~k~Lse~~il~Ia~QIlsAL~yLHs~GIVHRDIKPeNILId~~~~~~g~VK 950 (1075)
++.+ +.+++|||||++|+|.+++......+++..++.|+.||+.||.|||+++|+||||||+|||++ .++.+|
T Consensus 100 ~~~~---~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~----~~~~~K 172 (307)
T 3omv_A 100 YMTK---DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH----EGLTVK 172 (307)
T ss_dssp EECS---SSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEE----TTEEEE
T ss_pred EEEC---CEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEC----CCCCEE
T ss_conf 9978---958999974899878898752489999999999999999999999779952785578997888----999089
Q ss_pred EEECCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 942588512345---43247877888744720015887-89992356999999999999199999887857899766514
Q 001449 951 IGDLGLSKVKQQ---TLVSGGVRGTLPWMAPELLSGKS-HMVTEKIDVYSFGIVMWELLTGDEPYADMHCASIIGGIVNN 1026 (1075)
Q Consensus 951 LiDFGLAk~~~~---~~~s~s~~GTp~YlAPEvL~g~~-~~yS~KsDIWSLGVILyELLTGk~PF~~~~~~eil~~Iv~~ 1026 (1075)
|+|||+|+.... .......+||+.|+|||++.+.. ..|+.++|||||||++|||+||+.||.+......+..++..
T Consensus 173 i~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~ 252 (307)
T 3omv_A 173 IGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGR 252 (307)
T ss_dssp ECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHT
T ss_pred EEECCCCEECCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
T ss_conf 94415754246677640315644687724987861468998786877572899999999788998999969999999965
Q ss_pred CC-CC---CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 58-99---999989899999999962119999988999999999999970
Q 001449 1027 TL-RP---QIPSWCDPEWRSLMESCWASDPAERPSFSEISRRLRSMAAAI 1072 (1075)
Q Consensus 1027 ~l-~~---~ip~~lS~eLkdLIkkCLq~DP~kRPSa~EILq~Lesi~seL 1072 (1075)
.. .+ .++..++.++.+||.+||+.||.+|||+.++++.|+.+...+
T Consensus 253 ~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 253 GYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp TCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCC
T ss_conf 88888720035445699999999975779768909899999999974507
No 5
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=401.14 Aligned_cols=250 Identities=27% Similarity=0.424 Sum_probs=220.0
Q ss_pred CCCCEEEEEEECCCCCEEEEEEEEC--CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
Q ss_conf 4889049999732593899999986--93259998204334899346899999999999999818999543560111249
Q 001449 798 KNDDLEEVRELGSGTYGSVYHGKWR--GSDVAIKRIKASCFAGKPSERERLIADFWKEALLLSSLHHPNVVSFYGIVRDG 875 (1075)
Q Consensus 798 ~~~dYeilk~LGeGsfGtVYkak~k--Gt~VAIKvIk~~~~~~~~~e~e~~i~~flrEi~ILkkL~HPNIVkLlgv~~e~ 875 (1075)
..++|++++.||+|+||+||+++++ ++.||+|++.+.... .....+.+.+|+.+|+.++|||||++++++.+
T Consensus 30 ~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~-----~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~- 103 (311)
T 4aw0_A 30 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII-----KENKVPYVTRERDVMSRLDHPFFVKLYFTFQD- 103 (311)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-----HTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-
T ss_pred CCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCC-----CHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE-
T ss_conf 852368988983164849999999999989999998888877-----97899999999999986799898919999973-
Q ss_pred CCCCEEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCEEEEEECC
Q ss_conf 99952899965028847898731046678999999999999999999849915035788865752689999919994258
Q 001449 876 PDGSLATVTEFMVNGSLKQFLQKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLG 955 (1075)
Q Consensus 876 ~e~~L~LVmEYleGGSL~dlLkk~~k~Lse~~il~Ia~QIlsAL~yLHs~GIVHRDIKPeNILId~~~~~~g~VKLiDFG 955 (1075)
++.+|+|||||+||+|.+++.+.+ .+++..++.++.||+.||.|||+++|+||||||+|||++ .++.+||+|||
T Consensus 104 -~~~~yivmEy~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~----~~g~vKl~DFG 177 (311)
T 4aw0_A 104 -DEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN----EDMHIQITDFG 177 (311)
T ss_dssp -SSEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC----TTSCEEECCCT
T ss_pred -CCEEEEEEECCCCCCHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEC----CCCCEEEEECC
T ss_conf -898999996489989999998749-999999999999999999999988782687878996985----89888998768
Q ss_pred CCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 8512345---4324787788874472001588789992356999999999999199999887857899766514589999
Q 001449 956 LSKVKQQ---TLVSGGVRGTLPWMAPELLSGKSHMVTEKIDVYSFGIVMWELLTGDEPYADMHCASIIGGIVNNTLRPQI 1032 (1075)
Q Consensus 956 LAk~~~~---~~~s~s~~GTp~YlAPEvL~g~~~~yS~KsDIWSLGVILyELLTGk~PF~~~~~~eil~~Iv~~~l~~~i 1032 (1075)
+|+.... .......+||+.|+|||++.+.. |+.++|||||||++|+|++|+.||.+.+..+++..+.+..+ .+
T Consensus 178 la~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~--y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~--~~ 253 (311)
T 4aw0_A 178 TAKVLSPESKQARANSFVGTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEY--DF 253 (311)
T ss_dssp TCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSC--BCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CC
T ss_pred CCEECCCCCCCCCCCCCCCCCCCCCHHHHCCCC--CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC--CC
T ss_conf 750257787765436755680307998976899--99689899899999999749899899799999999971999--99
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf 9989899999999962119999988999999
Q 001449 1033 PSWCDPEWRSLMESCWASDPAERPSFSEISR 1063 (1075)
Q Consensus 1033 p~~lS~eLkdLIkkCLq~DP~kRPSa~EILq 1063 (1075)
+..+++++++||.+||..||.+|+|+.|++.
T Consensus 254 p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 254 PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp CTTCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred CCCCCHHHHHHHHHHCCCCHHHCCCHHHHCC
T ss_conf 9656999999999976289757809679758
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=401.04 Aligned_cols=247 Identities=23% Similarity=0.413 Sum_probs=215.1
Q ss_pred CCCEEEEEEECCCCCEEEEEEEEC--CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf 889049999732593899999986--932599982043348993468999999999999998189995435601112499
Q 001449 799 NDDLEEVRELGSGTYGSVYHGKWR--GSDVAIKRIKASCFAGKPSERERLIADFWKEALLLSSLHHPNVVSFYGIVRDGP 876 (1075)
Q Consensus 799 ~~dYeilk~LGeGsfGtVYkak~k--Gt~VAIKvIk~~~~~~~~~e~e~~i~~flrEi~ILkkL~HPNIVkLlgv~~e~~ 876 (1075)
...|+++++||+|+||+||+|+++ |+.||||++....... .+.+.+|+.+|+.++|||||++++++.+
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~--------~~~~~~Ei~il~~l~HpnIV~l~~~~~~-- 142 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--------RELLFNEVVIMRDYQHENVVEMYNSYLV-- 142 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS--------GGGGHHHHHHHHHCCCTTBCCEEEEEEE--
T ss_pred HHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCHHH--------HHHHHHHHHHHHHCCCCCCCCEEEEEEE--
T ss_conf 575387079602728299999998999899999985276568--------9999999999986799899919999998--
Q ss_pred CCCEEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCEEEEEECCC
Q ss_conf 99528999650288478987310466789999999999999999998499150357888657526899999199942588
Q 001449 877 DGSLATVTEFMVNGSLKQFLQKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGL 956 (1075)
Q Consensus 877 e~~L~LVmEYleGGSL~dlLkk~~k~Lse~~il~Ia~QIlsAL~yLHs~GIVHRDIKPeNILId~~~~~~g~VKLiDFGL 956 (1075)
.+.+|+|||||+||+|.+++.+. .+++..++.|+.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 143 ~~~~~ivmEy~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~----~~g~vKl~DFGl 216 (346)
T 4fih_A 143 GDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT----HDGRVKLSDFGF 216 (346)
T ss_dssp TTEEEEEECCCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC----TTCCEEECCCTT
T ss_pred CCEEEEEEECCCCCCHHHHHHCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEC----CCCCEEEECCCC
T ss_conf 99999999698998089998718--989999999999999999999988835562788997887----999889902757
Q ss_pred CCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC-CCCCCC
Q ss_conf 512345-432478778887447200158878999235699999999999919999988785789976651458-999999
Q 001449 957 SKVKQQ-TLVSGGVRGTLPWMAPELLSGKSHMVTEKIDVYSFGIVMWELLTGDEPYADMHCASIIGGIVNNTL-RPQIPS 1034 (1075)
Q Consensus 957 Ak~~~~-~~~s~s~~GTp~YlAPEvL~g~~~~yS~KsDIWSLGVILyELLTGk~PF~~~~~~eil~~Iv~~~l-~~~ip~ 1034 (1075)
|+.... .......+||+.|+|||++.+.. |+.++|||||||++|||++|+.||.+.+..+.+..+..... ......
T Consensus 217 a~~~~~~~~~~~~~~GTp~YmAPEvl~~~~--y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~ 294 (346)
T 4fih_A 217 CAQVSKEVPRRKSLVGTPYWMAPELISRLP--YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLH 294 (346)
T ss_dssp CEECCSSSCCBCCCCSCGGGCCHHHHTTCC--BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGG
T ss_pred CEECCCCCCCCCCCCCCCCCCCHHHHCCCC--CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
T ss_conf 536678877534656275827999977999--996899999999999999787998985999999999717999887502
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf 89899999999962119999988999999
Q 001449 1035 WCDPEWRSLMESCWASDPAERPSFSEISR 1063 (1075)
Q Consensus 1035 ~lS~eLkdLIkkCLq~DP~kRPSa~EILq 1063 (1075)
.++.++++||.+||..||.+|||+.|+++
T Consensus 295 ~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 295 KVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf 29999999999986799568909999960
No 7
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=1.00 E-value=1 Score=400.37 Aligned_cols=261 Identities=34% Similarity=0.587 Sum_probs=226.8
Q ss_pred CCCCCCCCEEEEEEECCCCCEEEEEEEEC-------CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 33114889049999732593899999986-------93259998204334899346899999999999999818999543
Q 001449 794 LQTIKNDDLEEVRELGSGTYGSVYHGKWR-------GSDVAIKRIKASCFAGKPSERERLIADFWKEALLLSSLHHPNVV 866 (1075)
Q Consensus 794 ~~ei~~~dYeilk~LGeGsfGtVYkak~k-------Gt~VAIKvIk~~~~~~~~~e~e~~i~~flrEi~ILkkL~HPNIV 866 (1075)
.+.+..++|.+.+.||+|+||.||+|++. +..||||+++.. .....+.|.+|+.+|++++|||||
T Consensus 7 ~~~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--------~~~~~~~f~~E~~il~~l~HpnIV 78 (299)
T 4asz_A 7 VQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--------SDNARKDFHREAELLTNLQHEHIV 78 (299)
T ss_dssp CCBCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--------CHHHHHHHHHHHHHHTTCCCTTBC
T ss_pred HCCCCHHHEEEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEEECCC--------CHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 441488892982498207882999999877666778879999996777--------858999999999999858998886
Q ss_pred EEECCCCCCCCCCEEEEEEEECCCCHHHHHHHCC------------CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 5601112499995289996502884789873104------------6678999999999999999999849915035788
Q 001449 867 SFYGIVRDGPDGSLATVTEFMVNGSLKQFLQKKD------------RTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKC 934 (1075)
Q Consensus 867 kLlgv~~e~~e~~L~LVmEYleGGSL~dlLkk~~------------k~Lse~~il~Ia~QIlsAL~yLHs~GIVHRDIKP 934 (1075)
++++++.+ .+.+++|||||++|+|.++|.+.+ ..+++..++.|+.||+.||.|||+++|+||||||
T Consensus 79 ~l~g~~~~--~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp 156 (299)
T 4asz_A 79 KFYGVCVE--GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLAT 156 (299)
T ss_dssp CEEEEECS--SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred CEEEEEEE--CCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 28799956--9989999985899968999986086421112357778899999999999999999999759904676577
Q ss_pred CCEEECCCCCCCCEEEEEECCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC-CCCC
Q ss_conf 86575268999991999425885123454---3247877888744720015887899923569999999999991-9999
Q 001449 935 ENLLVNMRDPQRPVCKIGDLGLSKVKQQT---LVSGGVRGTLPWMAPELLSGKSHMVTEKIDVYSFGIVMWELLT-GDEP 1010 (1075)
Q Consensus 935 eNILId~~~~~~g~VKLiDFGLAk~~~~~---~~s~s~~GTp~YlAPEvL~g~~~~yS~KsDIWSLGVILyELLT-Gk~P 1010 (1075)
+|||++ .++.+||+|||+|+..... .......||+.|+|||++.+.. |+.++|||||||++|||+| |+.|
T Consensus 157 ~NILl~----~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~--~~~k~DVwS~Gvvl~Ellt~G~~P 230 (299)
T 4asz_A 157 RNCLVG----ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRK--FTTESDVWSLGVVLWEIFTYGKQP 230 (299)
T ss_dssp GGEEEC----GGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCC--CCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred HHEEEC----CCCCEEECCCCCCEECCCCCCEEECCCEECCHHHCCHHHHCCCC--CCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 638987----99868988730010067887416647513470103889870799--970366778899999998089999
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 9887857899766514589999998989999999996211999998899999999999997
Q 001449 1011 YADMHCASIIGGIVNNTLRPQIPSWCDPEWRSLMESCWASDPAERPSFSEISRRLRSMAAA 1071 (1075)
Q Consensus 1011 F~~~~~~eil~~Iv~~~l~~~ip~~lS~eLkdLIkkCLq~DP~kRPSa~EILq~Lesi~se 1071 (1075)
|.+....+++..+.... .+..|..++.++.+||.+||+.||.+|||+.++++.|+.+.+.
T Consensus 231 f~~~~~~~~~~~i~~~~-~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 231 WYQLSNNEVIECITQGR-VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp TTTSCHHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHCCC-CCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHC
T ss_conf 99989999999998089-8899741439999999997687966892999999999877763
No 8
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=1.00 E-value=1 Score=399.80 Aligned_cols=261 Identities=35% Similarity=0.609 Sum_probs=226.8
Q ss_pred CCCCCCCCEEEEEEECCCCCEEEEEEEEC-------CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 33114889049999732593899999986-------93259998204334899346899999999999999818999543
Q 001449 794 LQTIKNDDLEEVRELGSGTYGSVYHGKWR-------GSDVAIKRIKASCFAGKPSERERLIADFWKEALLLSSLHHPNVV 866 (1075)
Q Consensus 794 ~~ei~~~dYeilk~LGeGsfGtVYkak~k-------Gt~VAIKvIk~~~~~~~~~e~e~~i~~flrEi~ILkkL~HPNIV 866 (1075)
...+..++|.+.++||+|+||.||+|+++ +..||||+++.. .....+.|.+|+.+|++++|||||
T Consensus 35 ~~~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--------~~~~~~~f~~E~~il~~l~HpnIV 106 (329)
T 4aoj_A 35 VHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--------SESARQDFQREAELLTMLQHQHIV 106 (329)
T ss_dssp SCBCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--------SHHHHHHHHHHHHHHTTCCCTTBC
T ss_pred HCCCCHHHEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEECCC--------CHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 330678992887797147784899899878665778969999997757--------979999999999999858998999
Q ss_pred EEECCCCCCCCCCEEEEEEEECCCCHHHHHHHCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 5601112499995289996502884789873104--------------66789999999999999999998499150357
Q 001449 867 SFYGIVRDGPDGSLATVTEFMVNGSLKQFLQKKD--------------RTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDL 932 (1075)
Q Consensus 867 kLlgv~~e~~e~~L~LVmEYleGGSL~dlLkk~~--------------k~Lse~~il~Ia~QIlsAL~yLHs~GIVHRDI 932 (1075)
++++++.+ ...+++|||||++|+|.+++.+.. ..+++..++.|+.||+.||.|||+++|+||||
T Consensus 107 ~l~g~~~~--~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDL 184 (329)
T 4aoj_A 107 RFFGVCTE--GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDL 184 (329)
T ss_dssp CEEEEECS--SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred CEEEEEEE--CCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCC
T ss_conf 69899998--9989999982799939999986075410012211245788999999999999999999984088422666
Q ss_pred CCCCEEECCCCCCCCEEEEEECCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC-CC
Q ss_conf 8886575268999991999425885123454---3247877888744720015887899923569999999999991-99
Q 001449 933 KCENLLVNMRDPQRPVCKIGDLGLSKVKQQT---LVSGGVRGTLPWMAPELLSGKSHMVTEKIDVYSFGIVMWELLT-GD 1008 (1075)
Q Consensus 933 KPeNILId~~~~~~g~VKLiDFGLAk~~~~~---~~s~s~~GTp~YlAPEvL~g~~~~yS~KsDIWSLGVILyELLT-Gk 1008 (1075)
||+|||++ .++.+||+|||+|+..... .......||+.|+|||++.+.. ++.++|||||||++|||+| |+
T Consensus 185 Kp~NILl~----~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~--~~~~sDvwS~Gvvl~Ellt~G~ 258 (329)
T 4aoj_A 185 ATRNCLVG----QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRK--FTTESDVWSFGVVLWEIFTYGK 258 (329)
T ss_dssp CGGGEEEE----TTTEEEECCCC----------------CCCCGGGCCHHHHTTCC--CCHHHHHHHHHHHHHHHHTTSC
T ss_pred CHHHEEEC----CCCCEEECCCCCCEECCCCCCCEECCCCCCCCCCCCHHHHCCCC--CCCCCCCCCHHHHHHHHHCCCC
T ss_conf 67648988----99968976660333656787530047645565665826544799--9966300105789999982899
Q ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 999887857899766514589999998989999999996211999998899999999999997
Q 001449 1009 EPYADMHCASIIGGIVNNTLRPQIPSWCDPEWRSLMESCWASDPAERPSFSEISRRLRSMAAA 1071 (1075)
Q Consensus 1009 ~PF~~~~~~eil~~Iv~~~l~~~ip~~lS~eLkdLIkkCLq~DP~kRPSa~EILq~Lesi~se 1071 (1075)
.||.+....+++..+... .++.++..+++++.+||.+||+.||++|||+.+|++.|+.+...
T Consensus 259 ~Pf~~~~~~~~~~~i~~g-~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 259 QPWYQLSNTEAIDCITQG-RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp CTTCSSCHHHHHHHHHHT-CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CCCCCCCHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHC
T ss_conf 999998999999999808-98998644639999999997475965792999999999987458
No 9
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=1.00 E-value=1 Score=396.05 Aligned_cols=263 Identities=29% Similarity=0.535 Sum_probs=225.0
Q ss_pred CCCCCCCEEEEEEECCCCCEEEEEEEECC-------CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC-CCEE
Q ss_conf 31148890499997325938999999869-------325999820433489934689999999999999981899-9543
Q 001449 795 QTIKNDDLEEVRELGSGTYGSVYHGKWRG-------SDVAIKRIKASCFAGKPSERERLIADFWKEALLLSSLHH-PNVV 866 (1075)
Q Consensus 795 ~ei~~~dYeilk~LGeGsfGtVYkak~kG-------t~VAIKvIk~~~~~~~~~e~e~~i~~flrEi~ILkkL~H-PNIV 866 (1075)
|++..++|++.+.||+|+||+||+|++.+ +.||+|.++... .....+.|.+|+.+|+++.| ||||
T Consensus 59 wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-------~~~~~~~~~~E~~il~~l~hhpnIV 131 (353)
T 4ase_A 59 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-------THSEHRALMSELKILIHIGHHLNVV 131 (353)
T ss_dssp HBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred CEECHHHEEEEEEEECCCCEEEEEEEECCCCCCCCCEEEEEEEECCCC-------CHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 170579959820982178959999998688854477599999976235-------8689999999999999757998487
Q ss_pred EEECCCCCCCCCCEEEEEEEECCCCHHHHHHHCC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 5601112499995289996502884789873104---------------6678999999999999999999849915035
Q 001449 867 SFYGIVRDGPDGSLATVTEFMVNGSLKQFLQKKD---------------RTIDRRKRLIIAMDAAFGMEYLHGKNIVHFD 931 (1075)
Q Consensus 867 kLlgv~~e~~e~~L~LVmEYleGGSL~dlLkk~~---------------k~Lse~~il~Ia~QIlsAL~yLHs~GIVHRD 931 (1075)
++++++.+. ...+++|||||++|+|.++|++.. ..+++..++.|+.||+.||.|||+++|+|||
T Consensus 132 ~l~g~~~~~-~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRD 210 (353)
T 4ase_A 132 NLLGACTKP-GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRD 210 (353)
T ss_dssp CEEEEECCT-TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred EEEEEEEEC-CCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCC
T ss_conf 788999946-9779999983898979999974356665433341011035689999999999999998767627843574
Q ss_pred CCCCCEEECCCCCCCCEEEEEECCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC-C
Q ss_conf 78886575268999991999425885123454---3247877888744720015887899923569999999999991-9
Q 001449 932 LKCENLLVNMRDPQRPVCKIGDLGLSKVKQQT---LVSGGVRGTLPWMAPELLSGKSHMVTEKIDVYSFGIVMWELLT-G 1007 (1075)
Q Consensus 932 IKPeNILId~~~~~~g~VKLiDFGLAk~~~~~---~~s~s~~GTp~YlAPEvL~g~~~~yS~KsDIWSLGVILyELLT-G 1007 (1075)
|||+|||++ .++.+||+|||+|+..... .......||+.|+|||++.+.. |+.++|||||||++|||+| |
T Consensus 211 LK~~NILl~----~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~--y~~ksDVwS~Gv~l~El~t~G 284 (353)
T 4ase_A 211 LAARNILLS----EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLG 284 (353)
T ss_dssp CSGGGEEEC----GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCC--CCHHHHHHHHHHHHHHHTTTS
T ss_pred CCCCCEEEC----CCCCEEECCCHHHHHCCCCCCCEEECCCCCCCCCCCHHHHHCCC--CCCCCCEEEHHHHHHHHHHCC
T ss_conf 672113057----99978979654322245688720325401466656989994699--997553740689999998189
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 9999887857899766514589999998989999999996211999998899999999999997
Q 001449 1008 DEPYADMHCASIIGGIVNNTLRPQIPSWCDPEWRSLMESCWASDPAERPSFSEISRRLRSMAAA 1071 (1075)
Q Consensus 1008 k~PF~~~~~~eil~~Iv~~~l~~~ip~~lS~eLkdLIkkCLq~DP~kRPSa~EILq~Lesi~se 1071 (1075)
+.||.+....+.+...+....++.+|..+++++.++|.+||+.||.+|||+.+|++.|+.+..+
T Consensus 285 ~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 285 ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp CCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHH
T ss_conf 9999998989999999973898888865789999999997686966793999999999999987
No 10
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=394.13 Aligned_cols=251 Identities=27% Similarity=0.423 Sum_probs=217.7
Q ss_pred CCCCCCEEEEEEECCCCCEEEEEEEE-----CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 11488904999973259389999998-----6932599982043348993468999999999999998189995435601
Q 001449 796 TIKNDDLEEVRELGSGTYGSVYHGKW-----RGSDVAIKRIKASCFAGKPSERERLIADFWKEALLLSSLHHPNVVSFYG 870 (1075)
Q Consensus 796 ei~~~dYeilk~LGeGsfGtVYkak~-----kGt~VAIKvIk~~~~~~~~~e~e~~i~~flrEi~ILkkL~HPNIVkLlg 870 (1075)
.++.++|++++.||+|+||+||+|++ .++.||+|++++........ ..+.+|+.+|+.++|||||++++
T Consensus 20 ~~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~------~~~~~E~~il~~l~HpnIv~l~~ 93 (304)
T 3ubd_A 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDR------VRTKMERDILVEVNHPFIVKLHY 93 (304)
T ss_dssp CCCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEEC------C------CCCCCCCCTTEECEEE
T ss_pred CCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEHHHCCHHHH------HHHHHHHHHHHHCCCCCCCEEEE
T ss_conf 389556589889721888399999985588789799999981577684789------99999999998779979990999
Q ss_pred CCCCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCEEE
Q ss_conf 11249999528999650288478987310466789999999999999999998499150357888657526899999199
Q 001449 871 IVRDGPDGSLATVTEFMVNGSLKQFLQKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCK 950 (1075)
Q Consensus 871 v~~e~~e~~L~LVmEYleGGSL~dlLkk~~k~Lse~~il~Ia~QIlsAL~yLHs~GIVHRDIKPeNILId~~~~~~g~VK 950 (1075)
++.+ ++.+|+|||||+||+|.+++.+.+ .+++..++.++.||+.||.|||++||+||||||+|||++ .++.+|
T Consensus 94 ~~~~--~~~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~----~~g~vK 166 (304)
T 3ubd_A 94 AFQT--EGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD----EEGHIK 166 (304)
T ss_dssp EEEE--TTEEEEEECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC----TTSCEE
T ss_pred EEEE--CCEEEEEEECCCCCCHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEC----CCCCEE
T ss_conf 9998--999999997579988899997559-999999999999999999999977995888878995786----899887
Q ss_pred EEECCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf 94258851234-54324787788874472001588789992356999999999999199999887857899766514589
Q 001449 951 IGDLGLSKVKQ-QTLVSGGVRGTLPWMAPELLSGKSHMVTEKIDVYSFGIVMWELLTGDEPYADMHCASIIGGIVNNTLR 1029 (1075)
Q Consensus 951 LiDFGLAk~~~-~~~~s~s~~GTp~YlAPEvL~g~~~~yS~KsDIWSLGVILyELLTGk~PF~~~~~~eil~~Iv~~~l~ 1029 (1075)
|+|||+|+... ........+||+.|+|||++.+.. |+.++|||||||++|||++|+.||.+.+..+++..+.+...
T Consensus 167 l~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~--y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~- 243 (304)
T 3ubd_A 167 LTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRG--HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL- 243 (304)
T ss_dssp EESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSC--CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-
T ss_pred ECCCCCCEECCCCCCCCCCCCCCCCCCCHHHHCCCC--CCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC-
T ss_conf 623663433268876304544181507999965688--78777636119999999859899898499999999971899-
Q ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCCCC-----HHHHHH
Q ss_conf 9999989899999999962119999988-----999999
Q 001449 1030 PQIPSWCDPEWRSLMESCWASDPAERPS-----FSEISR 1063 (1075)
Q Consensus 1030 ~~ip~~lS~eLkdLIkkCLq~DP~kRPS-----a~EILq 1063 (1075)
.++..+++++++||.+||+.||.+|+| ++++++
T Consensus 244 -~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 244 -GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp -CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred -CCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHC
T ss_conf -99876899999999998646987879998678999976
Done!