BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001451
(1075 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54I39|IST1L_DICDI IST1-like protein OS=Dictyostelium discoideum GN=DDB_G0289029 PE=3
SV=1
Length = 369
Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 101/168 (60%), Gaps = 2/168 (1%)
Query: 10 KCKTSLKLASSRIKLLKNKRGAQVKQLKRELAQLLESGQDQTARIRVEHVVREENTMAAY 69
K K LKLA SRI++LKNK+ V+ KR +A+LL +++ARIRVE ++R+E + +
Sbjct: 12 KLKVQLKLAVSRIQILKNKKANIVRDEKRNVAELLRKKNEESARIRVETIIRDEYLIECF 71
Query: 70 DLLEIYCELIVTRLPIVESQKNCPIDLKEAICSVIFASPRCADIPELMDVRKMFTSKYGK 129
++E+ CEL+ R+ ++ + P+++KE+I +++++S R IPEL ++ +KYGK
Sbjct: 72 QIIEVLCELLHARINLINATTEMPLEMKESIFTLVYSSQR-IQIPELEQIKNQLKAKYGK 130
Query: 130 DFVSAAAELRPDCGVSRLLVEKLSVKAPDGPTKIKILTAIAEEHNIKW 177
+ A V+ +V KLS PD + L+ IAE+ N+ W
Sbjct: 131 G-LENEANCHCSTHVNPKIVHKLSYATPDPSIIFQTLSEIAEKFNVDW 177
>sp|P53990|IST1_HUMAN IST1 homolog OS=Homo sapiens GN=IST1 PE=1 SV=1
Length = 364
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 113/190 (59%), Gaps = 2/190 (1%)
Query: 1 MLHRSFKPAKCKTSLKLASSRIKLLKNKRGAQVKQLKRELAQLLESGQDQTARIRVEHVV 60
ML FK + + +L+L +R+KLL+ K+ ++ ++E+A L +G+D+ ARIRVEH++
Sbjct: 1 MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHII 60
Query: 61 REENTMAAYDLLEIYCELIVTRLPIVESQKNCPIDLKEAICSVIFASPRC-ADIPELMDV 119
RE+ + A ++LE+YC+L++ R +++S K L E++ ++I+A+PR +++ EL V
Sbjct: 61 REDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIV 120
Query: 120 RKMFTSKYGKDFVSAAAELRPDCGVSRLLVEKLSVKAPDGPTKIKILTAIAEEHNIKWDP 179
+KY K++ V+ L+ KLSV+AP + L IA+ +N+ ++P
Sbjct: 121 ADQLCAKYSKEY-GKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEP 179
Query: 180 KSFGEKDSRP 189
S ++ P
Sbjct: 180 DSVVMAEAPP 189
>sp|Q568Z6|IST1_RAT IST1 homolog OS=Rattus norvegicus GN=Ist1 PE=2 SV=1
Length = 366
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 110/182 (60%), Gaps = 2/182 (1%)
Query: 1 MLHRSFKPAKCKTSLKLASSRIKLLKNKRGAQVKQLKRELAQLLESGQDQTARIRVEHVV 60
ML FK + + +L+L +R+KLL+ K+ ++ ++E+A L +G+D+ ARIRVEH++
Sbjct: 1 MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHII 60
Query: 61 REENTMAAYDLLEIYCELIVTRLPIVESQKNCPIDLKEAICSVIFASPRC-ADIPELMDV 119
RE+ + A ++LE+YC+L++ R +++S K L E++ ++I+A+PR +++ EL V
Sbjct: 61 REDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIV 120
Query: 120 RKMFTSKYGKDFVSAAAELRPDCGVSRLLVEKLSVKAPDGPTKIKILTAIAEEHNIKWDP 179
+KY K++ V+ L+ KLSV+AP + L IA+ +N+ ++P
Sbjct: 121 ADQLCAKYSKEY-GKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEP 179
Query: 180 KS 181
S
Sbjct: 180 DS 181
>sp|Q5R6G8|IST1_PONAB IST1 homolog OS=Pongo abelii GN=IST1 PE=2 SV=1
Length = 364
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 112/190 (58%), Gaps = 2/190 (1%)
Query: 1 MLHRSFKPAKCKTSLKLASSRIKLLKNKRGAQVKQLKRELAQLLESGQDQTARIRVEHVV 60
ML FK + + +L+L +R+KLL+ K+ ++ ++E+A L +G+D+ ARIRVEH++
Sbjct: 1 MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHII 60
Query: 61 REENTMAAYDLLEIYCELIVTRLPIVESQKNCPIDLKEAICSVIFASPRC-ADIPELMDV 119
RE+ + A ++LE+YC+L++ R +++S K L E++ ++I+A+PR +++ EL V
Sbjct: 61 REDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIV 120
Query: 120 RKMFTSKYGKDFVSAAAELRPDCGVSRLLVEKLSVKAPDGPTKIKILTAIAEEHNIKWDP 179
+KY K + V+ L+ KLSV+AP + L IA+ +N+ ++P
Sbjct: 121 ADQLCAKYSKGY-GKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEP 179
Query: 180 KSFGEKDSRP 189
S ++ P
Sbjct: 180 DSVVMAEAPP 189
>sp|Q9CX00|IST1_MOUSE IST1 homolog OS=Mus musculus GN=Ist1 PE=2 SV=1
Length = 362
Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 110/182 (60%), Gaps = 2/182 (1%)
Query: 1 MLHRSFKPAKCKTSLKLASSRIKLLKNKRGAQVKQLKRELAQLLESGQDQTARIRVEHVV 60
ML FK + + +L+L +R+KLL+ K+ ++ ++E+A L +G+D+ ARIRVEH++
Sbjct: 1 MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHII 60
Query: 61 REENTMAAYDLLEIYCELIVTRLPIVESQKNCPIDLKEAICSVIFASPRC-ADIPELMDV 119
RE+ + A ++LE+YC+L++ R +++S K L E++ ++I+A+PR +++ EL V
Sbjct: 61 REDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIV 120
Query: 120 RKMFTSKYGKDFVSAAAELRPDCGVSRLLVEKLSVKAPDGPTKIKILTAIAEEHNIKWDP 179
+KY K++ V+ L+ KLSV+AP + L IA+ +N+ ++P
Sbjct: 121 ADQLCAKYSKEY-GKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEP 179
Query: 180 KS 181
S
Sbjct: 180 DS 181
>sp|Q3ZBV1|IST1_BOVIN IST1 homolog OS=Bos taurus GN=IST1 PE=2 SV=1
Length = 364
Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 112/190 (58%), Gaps = 2/190 (1%)
Query: 1 MLHRSFKPAKCKTSLKLASSRIKLLKNKRGAQVKQLKRELAQLLESGQDQTARIRVEHVV 60
ML K + + +L+L +R+KLL+ K+ ++ ++E+A L +G+D+ ARIRVEH++
Sbjct: 1 MLGSGIKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHII 60
Query: 61 REENTMAAYDLLEIYCELIVTRLPIVESQKNCPIDLKEAICSVIFASPRC-ADIPELMDV 119
RE+ + A ++LE+YC+L++ R +++S K L E++ ++I+A+PR +++ EL V
Sbjct: 61 REDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIV 120
Query: 120 RKMFTSKYGKDFVSAAAELRPDCGVSRLLVEKLSVKAPDGPTKIKILTAIAEEHNIKWDP 179
+KY K++ V+ L+ KLSV+AP + L IA+ +N+ ++P
Sbjct: 121 ADQLCAKYSKEY-GKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEP 179
Query: 180 KSFGEKDSRP 189
S ++ P
Sbjct: 180 DSVVMAEAPP 189
>sp|P53843|IST1_YEAST Vacuolar protein sorting-associated protein IST1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IST1 PE=1
SV=1
Length = 298
Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/176 (26%), Positives = 91/176 (51%), Gaps = 10/176 (5%)
Query: 10 KCKTSLKLASSRIKLLKNKRGAQVKQLKRELAQLLESGQDQTARIRVEHVVREENTMAAY 69
K KT LK+ R++ + K+ A KQ +R++AQLL + ++Q A RVE ++ ++ +
Sbjct: 11 KLKTCLKMCIQRLRYAQEKQQAIAKQSRRQVAQLLLTNKEQKAHYRVETLIHDDIHIELL 70
Query: 70 DLLEIYCELIVTRLPIVES--------QKNCPIDLKEAICSVIFASPRCADIPELMDVRK 121
++LE+YCEL++ R+ ++ +++ + EAI S+I+A ++ EL ++
Sbjct: 71 EILELYCELLLARVQVINDISTEEQLVKEHMDDGINEAIRSLIYAILFVDEVKELSQLKD 130
Query: 122 MFTSKYGKDFVSAAAELRPDCGVSRLLVEKLSVKAPDGPTKIKILTAIAEEHNIKW 177
+ K +FV+ D V +++K S P L IA+ +++ +
Sbjct: 131 LMAWKINVEFVNGVIADHID--VPEKIIKKCSPSVPKEELVDLYLKEIAKTYDVPY 184
>sp|O74490|IST1_SCHPO Vacuolar protein sorting-associated protein ist1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ist1 PE=3 SV=1
Length = 271
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
Query: 9 AKCKTSLKLASSRIKLLKNKRGAQVKQLKRELAQLLESGQDQTARIRVEHVVREENTMAA 68
++ + LKLA+SRI++L+ K A KQ +R +A L+S A+ R+E ++ ++ +
Sbjct: 2 SRLQIQLKLAASRIEILRQKEEALAKQARRNVALGLKSYSPALAKARIEPLIMQDIYIEL 61
Query: 69 YDLLEIYCELIVTRLPIVESQK-NCPIDLKEAICSVIFASPRCADIPELMDVRKMFTSKY 127
+LL++ E++ R ++E + N + K ++ V+ A+P+ I EL V Y
Sbjct: 62 LELLQVDVEILANRCVVLEKRAFNDSMSFKSSLYHVMAAAPQL-QIKELRFVHDFLVKLY 120
Query: 128 GKDF 131
GK+F
Sbjct: 121 GKEF 124
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.307 0.122 0.340
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 399,588,398
Number of Sequences: 539616
Number of extensions: 17392288
Number of successful extensions: 51372
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 649
Number of HSP's that attempted gapping in prelim test: 48398
Number of HSP's gapped (non-prelim): 2618
length of query: 1075
length of database: 191,569,459
effective HSP length: 128
effective length of query: 947
effective length of database: 122,498,611
effective search space: 116006184617
effective search space used: 116006184617
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 67 (30.4 bits)