Query 001455
Match_columns 1074
No_of_seqs 798 out of 3736
Neff 6.5
Searched_HMMs 29240
Date Tue Mar 26 17:01:16 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001455.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_755-759//hhsearch_pdb/001455hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 1.0 1 1 299.1 38.8 272 792-1073 106-409 (410)
2 3ow8_A WD repeat-containing pr 1.0 1 1 290.1 42.1 279 787-1073 25-319 (321)
3 1nr0_A Actin interacting prote 1.0 1 1 277.1 39.7 275 791-1073 187-609 (611)
4 3iz6_a 40S ribosomal protein R 1.0 1 1 275.8 32.2 281 780-1073 57-373 (380)
5 1got_B GT-beta; complex (GTP-b 1.0 1 1 274.8 43.2 272 791-1072 52-340 (340)
6 3dm0_A Maltose-binding peripla 1.0 1 1 271.2 43.0 272 792-1073 380-691 (694)
7 1erj_A Transcriptional repress 1.0 1 1 269.2 40.1 277 792-1073 62-387 (393)
8 4g56_B MGC81050 protein; prote 1.0 1 1 268.7 32.6 275 792-1073 40-341 (357)
9 2pbi_B Guanine nucleotide-bind 1.0 1 1 267.7 42.5 272 792-1072 62-354 (354)
10 1nr0_A Actin interacting prote 1.0 1 1 267.4 40.0 279 791-1073 144-565 (611)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=1.00 E-value=1 Score=299.06 Aligned_cols=272 Identities=17% Similarity=0.226 Sum_probs=237.1
Q ss_pred CCCCCEEEEEEE--CCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCC
Q ss_conf 788768999992--989999988992999977999713799851478877999994799989999589809999866891
Q 001455 792 KCSGAVTALIYY--KGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQMVQRK 869 (1074)
Q Consensus 792 gH~~~VtsIafS--~~~LaSGs~DGtVrIWDi~s~~~~~i~tl~gH~~~VtsIafSpdg~~LaSGS~DGtIrIWDi~tg~ 869 (1074)
+|.++|++++|+ +.++++|+.||+|++||..+++. ...+.+|.+.|++++|+|++..|++|+.|++|++||+.+++
T Consensus 106 gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~--~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~ 183 (410)
T 1vyh_C 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF--ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE 183 (410)
T ss_dssp CCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCC--CEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC
T ss_pred CCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCE--EEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCC
T ss_conf 6677689999969999899993898599998999937--78881667868789985999999999189819999589982
Q ss_pred EEEEEEECCCCCEEE--ECCCCCEEEEEECCCEEEEEECC--CCEEEEEC-CCCEEEEEEE-CCE-EEEEECCCCEEEEE
Q ss_conf 688887336888689--71599959997349819999679--95143105-9984899973-998-99997799299998
Q 001455 870 LELIEVIATKEPIRK--LDTYGKTIFASTQGHRMKVIDSS--RTLKDIYR-SKGIKSMSVV-QGK-IYIGCMDSSIQELA 942 (1074)
Q Consensus 870 ~~~~~~~~h~~~V~s--ls~dg~~LvsgS~DgtI~IWDl~--~~~~~l~~-~~~V~sIafs-dgk-LlsGs~DgsI~IwD 942 (1074)
+.. ...+|...|.+ |.+++..+++++.|+.|++||+. .....+.. ...+.++.++ ++. +++|+.|+.|++||
T Consensus 184 ~~~-~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd 262 (410)
T 1vyh_C 184 CIR-TMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262 (410)
T ss_dssp EEE-CCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEE-EECCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCEEEEEE
T ss_conf 669-9828999778999967999999996899699998999948999927886289999989999999991899099998
Q ss_pred CCCCCEEEECCCCCCCCCCCCCEEEEEECCC--------------------CEEEEEEECCCCEEEEEECCCCCEEEECC
Q ss_conf 3378200001565333478988389998189--------------------51999995499939999799997179706
Q 001455 943 VSNNVEREIKAPFKSWRLQSKPINSLVVYKD--------------------WLYSASSSVEGSNIKEWRRHRKPQISIAP 1002 (1074)
Q Consensus 943 l~tg~~~~i~~~~r~~~~h~~~I~sL~~spd--------------------~i~lvs~S~dDgtIkIWDl~s~~~i~~l~ 1002 (1074)
+.++.... .+..|...+.++.++|+ +.++++++ .|+.|++||..++.++..+.
T Consensus 263 ~~~~~~~~------~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs-~D~~i~iwd~~~~~~~~~~~ 335 (410)
T 1vyh_C 263 VATKECKA------ELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS-RDKTIKMWDVSTGMCLMTLV 335 (410)
T ss_dssp TTTCCEEE------EECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE-TTSEEEEEETTTTEEEEEEE
T ss_pred CCCCCEEE------EECCCCCEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCEEEEEE-CCCEEEEEECCCCCEEEEEE
T ss_conf 98974366------733787458999985865543101212555556678888999993-89849999889996699997
Q ss_pred CCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECC-CCEEEEEEC--CCEEEEEECCCCEEEEEC
Q ss_conf 78987579999159999999979992999988999079998079-976999972--999999979991999822
Q 001455 1003 EKGTTIQAMAVVEDFIYLNYNSSASSLQIWLRGTQQKVGRISAG-SKITSLLTA--NDIVLCGTETGLIKGWIP 1073 (1074)
Q Consensus 1003 gH~~~VtsIafSPDG~~LaSGS~DGtIrIWDl~tg~~I~tL~~h-~~Vtsla~s--g~~LaSGs~DG~IrIWdi 1073 (1074)
+|...|++++|+|++.+|++|+.||+|++||..+++++.++.+| +.|++++|+ +.+|++|+.||.|++|++
T Consensus 336 ~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred CCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEEC
T ss_conf 78885899999499899999959792999989999068998477786899998289999999927994899737
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=1.00 E-value=1 Score=290.11 Aligned_cols=279 Identities=16% Similarity=0.180 Sum_probs=240.4
Q ss_pred EEECCCCCCCEEEEEEEC------CEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEE
Q ss_conf 740477887689999929------89999988992999977999713799851478877999994799989999589809
Q 001455 787 LEASHKCSGAVTALIYYK------GLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTI 860 (1074)
Q Consensus 787 le~~~gH~~~VtsIafS~------~~LaSGs~DGtVrIWDi~s~~~~~i~tl~gH~~~VtsIafSpdg~~LaSGS~DGtI 860 (1074)
++..++|.+.|++++|++ .++++|+.|++|++|+...+.......+.+|...|.+++|++++..+++++.|++|
T Consensus 25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i 104 (321)
T 3ow8_A 25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHI 104 (321)
T ss_dssp EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred EEECCCCCCCEEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCE
T ss_conf 55215688967999982488888888999849998999889899743666005677888999988999989999379809
Q ss_pred EEEECCCCCEEEEEEECCCCCE--EEECCCCCEEEEEECCCEEEEEECCCC--EEEEEC-CCCEEEEEEE-CCE-EEEEE
Q ss_conf 9998668916888873368886--897159995999734981999967995--143105-9984899973-998-99997
Q 001455 861 GVWQMVQRKLELIEVIATKEPI--RKLDTYGKTIFASTQGHRMKVIDSSRT--LKDIYR-SKGIKSMSVV-QGK-IYIGC 933 (1074)
Q Consensus 861 rIWDi~tg~~~~~~~~~h~~~V--~sls~dg~~LvsgS~DgtI~IWDl~~~--~~~l~~-~~~V~sIafs-dgk-LlsGs 933 (1074)
++||+.+++.... ...+...+ .+|+|++..+++++.++.+++|++... ...+.. ...+.+++|+ +++ +++|+
T Consensus 105 ~lWd~~~~~~~~~-~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~ 183 (321)
T 3ow8_A 105 RLWDLENGKQIKS-IDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGA 183 (321)
T ss_dssp EEEETTTTEEEEE-EECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCCEEEE-EECCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEEEECCCCCEEEEEC
T ss_conf 9997899979899-937985679999999999899983899199998679946677438994299999989999999992
Q ss_pred CCCCEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCCEEEECCCCCCCEEEEEE
Q ss_conf 79929999833782000015653334789883899981895199999549993999979999717970678987579999
Q 001455 934 MDSSIQELAVSNNVEREIKAPFKSWRLQSKPINSLVVYKDWLYSASSSVEGSNIKEWRRHRKPQISIAPEKGTTIQAMAV 1013 (1074)
Q Consensus 934 ~DgsI~IwDl~tg~~~~i~~~~r~~~~h~~~I~sL~~spd~i~lvs~S~dDgtIkIWDl~s~~~i~~l~gH~~~VtsIaf 1013 (1074)
.|+.|++||+.+++... .+..|..+|.++.|+|++.++++++ .|+.|++||...+.....+.+|...|.+++|
T Consensus 184 ~dg~i~iwd~~~~~~~~------~~~~h~~~v~~l~~spd~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 256 (321)
T 3ow8_A 184 IDGIINIFDIATGKLLH------TLEGHAMPIRSLTFSPDSQLLVTAS-DDGYIKIYDVQHANLAGTLSGHASWVLNVAF 256 (321)
T ss_dssp TTSCEEEEETTTTEEEE------EECCCSSCCCEEEECTTSCEEEEEC-TTSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred CCCEEEEEECCCCCEEE------EECCCCCCEEEEEECCCCCEEEEEC-CCCEEEEEECCCCCEEEEECCCCCCEEEEEE
T ss_conf 89839999999990999------9802589601899948999899990-9980999878996325898688882689999
Q ss_pred ECCCCEEEEEECCCCEEEEECCCCCEEEEEECC-CCEEEEEEC--CCEEEEEECCCCEEEEEC
Q ss_conf 159999999979992999988999079998079-976999972--999999979991999822
Q 001455 1014 VEDFIYLNYNSSASSLQIWLRGTQQKVGRISAG-SKITSLLTA--NDIVLCGTETGLIKGWIP 1073 (1074)
Q Consensus 1014 SPDG~~LaSGS~DGtIrIWDl~tg~~I~tL~~h-~~Vtsla~s--g~~LaSGs~DG~IrIWdi 1073 (1074)
+|++.+|++++.|++|++||+.+++++.++.+| ..|++++|+ ++.|++++.||.|++|++
T Consensus 257 sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 257 CPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred CCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEEC
T ss_conf 799998999818980999949998888898378773899999899999999758980899957
No 3
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=277.14 Aligned_cols=275 Identities=17% Similarity=0.216 Sum_probs=204.5
Q ss_pred CCCCCCEEEEEEE--CCEEEEEECCCCEEEEECCCCCEEEEEEEC-------CCCCCEEEEEECCCCCEEEEEECCCEEE
Q ss_conf 7788768999992--989999988992999977999713799851-------4788779999947999899995898099
Q 001455 791 HKCSGAVTALIYY--KGLLCSGFSDGSIKMWDIKKQSAMLVWDVK-------EHRKAVTSFSLFEPGESLLSGSADKTIG 861 (1074)
Q Consensus 791 ~gH~~~VtsIafS--~~~LaSGs~DGtVrIWDi~s~~~~~i~tl~-------gH~~~VtsIafSpdg~~LaSGS~DGtIr 861 (1074)
.+|.+.|++++|+ +.++++|+.||+|++||..+++. ...+. +|.+.|.+++|+|++.+|++++.|++|+
T Consensus 187 ~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~--~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~ 264 (611)
T 1nr0_A 187 GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTK--TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIK 264 (611)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE--EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCE--EEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEE
T ss_conf 00257169999979999899998999199988999828--6651366432356678789999979999999990898099
Q ss_pred EEECCCCCEEEE------------------------------------------EEECCCCCEEE--ECCCCCEEEEEEC
Q ss_conf 998668916888------------------------------------------87336888689--7159995999734
Q 001455 862 VWQMVQRKLELI------------------------------------------EVIATKEPIRK--LDTYGKTIFASTQ 897 (1074)
Q Consensus 862 IWDi~tg~~~~~------------------------------------------~~~~h~~~V~s--ls~dg~~LvsgS~ 897 (1074)
+||+.+++.... ...+|...|.+ +++++.++++++.
T Consensus 265 lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~ 344 (611)
T 1nr0_A 265 IWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADA 344 (611)
T ss_dssp EEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEECCCCCEEEEECCCCCCCCEEEEEEECCCEEEEEECCCCEEEEECCCCCCCEEECCCCCCEEEEEEECCCCEEEEEEC
T ss_conf 99688870134404788766406899973887999958996899968899744698378888899999189998999958
Q ss_pred CCEEEEEECCCCE--EEE--------------------------------------------------------------
Q ss_conf 9819999679951--431--------------------------------------------------------------
Q 001455 898 GHRMKVIDSSRTL--KDI-------------------------------------------------------------- 913 (1074)
Q Consensus 898 DgtI~IWDl~~~~--~~l-------------------------------------------------------------- 913 (1074)
|+.|++||+.... ..+
T Consensus 345 D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 424 (611)
T 1nr0_A 345 EGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGD 424 (611)
T ss_dssp TSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSS
T ss_pred CCCEEEEECCCCCEEEECCCCCCCEEEEEEECCCCCEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCCC
T ss_conf 98499997887925632166776507899987899699998489668954688543565212001489970799807996
Q ss_pred ---------------------ECCCCEEEEEEE-CCE-EEEEECCCCEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEE
Q ss_conf ---------------------059984899973-998-999977992999983378200001565333478988389998
Q 001455 914 ---------------------YRSKGIKSMSVV-QGK-IYIGCMDSSIQELAVSNNVEREIKAPFKSWRLQSKPINSLVV 970 (1074)
Q Consensus 914 ---------------------~~~~~V~sIafs-dgk-LlsGs~DgsI~IwDl~tg~~~~i~~~~r~~~~h~~~I~sL~~ 970 (1074)
.....+.+++|+ +|+ +++|+.|+.|++||+.++..... .. ..|...|.++.|
T Consensus 425 ~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~----~~-~~h~~~v~~v~f 499 (611)
T 1nr0_A 425 IAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEV----KT-IVHPAEITSVAF 499 (611)
T ss_dssp CEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEE----EE-EECSSCEEEEEE
T ss_pred EEEEEECCEEEEEECCCEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCEEEE----EC-CCCCCCEEEEEE
T ss_conf 9999967639998489434640688954999928998999968997399999459922241----01-577886079999
Q ss_pred CCCCEEEEEEECCCCEEEEEECCC-CCEEEE--CCCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCC-EE-EEEEC
Q ss_conf 189519999954999399997999-971797--06789875799991599999999799929999889990-79-99807
Q 001455 971 YKDWLYSASSSVEGSNIKEWRRHR-KPQISI--APEKGTTIQAMAVVEDFIYLNYNSSASSLQIWLRGTQQ-KV-GRISA 1045 (1074)
Q Consensus 971 spd~i~lvs~S~dDgtIkIWDl~s-~~~i~~--l~gH~~~VtsIafSPDG~~LaSGS~DGtIrIWDl~tg~-~I-~tL~~ 1045 (1074)
+|++.++++++ .|++|++|+..+ +..... ..+|...|++++|+|||++|++|+.|++|++|++.++. .+ ..+.+
T Consensus 500 spdg~~las~s-~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~ 578 (611)
T 1nr0_A 500 SNNGAFLVATD-QSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGA 578 (611)
T ss_dssp CTTSSEEEEEE-TTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTS
T ss_pred CCCCCEEEEEC-CCCCEEEEECCCCCCEEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCHHHCC
T ss_conf 89999899994-89989998857787223210264046642589989989979999799729999788755563264446
Q ss_pred C--CCEEEEEECC-CEEEEEECCCCEEEEEC
Q ss_conf 9--9769999729-99999979991999822
Q 001455 1046 G--SKITSLLTAN-DIVLCGTETGLIKGWIP 1073 (1074)
Q Consensus 1046 h--~~Vtsla~sg-~~LaSGs~DG~IrIWdi 1073 (1074)
| ..|++++|++ ..|++|+.||+|++|++
T Consensus 579 h~~~~v~~v~fs~d~~l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 579 HAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 609 (611)
T ss_dssp STTSCEEEEEEEETTEEEEEETTSCEEEEEC
T ss_pred CCCCCEEEEEECCCCEEEEECCCCCEEEEEC
T ss_conf 7656711899858997999528877899844
No 4
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=1.00 E-value=1 Score=275.82 Aligned_cols=281 Identities=14% Similarity=0.176 Sum_probs=227.7
Q ss_pred CEEEEEEEEECCCCCCCEEEEEEE--CCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECC
Q ss_conf 213689974047788768999992--989999988992999977999713799851478877999994799989999589
Q 001455 780 SCVHTQILEASHKCSGAVTALIYY--KGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSAD 857 (1074)
Q Consensus 780 ~~vhtl~le~~~gH~~~VtsIafS--~~~LaSGs~DGtVrIWDi~s~~~~~i~tl~gH~~~VtsIafSpdg~~LaSGS~D 857 (1074)
.+.+++. +|.+.|++++|+ +.++++|+.||+|++||..+++ ....+.+|...|.+++|+|++.++++|+.|
T Consensus 57 ~~~~~l~-----gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~--~~~~~~~h~~~v~~~~~s~~g~~las~~~d 129 (380)
T 3iz6_a 57 VCCRTLQ-----GHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQ--KTHAIKLHCPWVMECAFAPNGQSVACGGLD 129 (380)
T ss_dssp EEEEEEC-----CCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE--EEEEEECCCTTCCCCEECTTSSEEEECCSS
T ss_pred EEEECCC-----CCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCC--CCEEEECCCCCEEEEEECCCCCEEEEEECC
T ss_conf 9820000-----453477899996899989999189809998788886--014885599878999998999989995479
Q ss_pred CEEEEEECCCCCE------EEEEEECCCCCEEE--ECCC-CCEEEEEECCCEEEEEECCCC--EEEE------ECCCCEE
Q ss_conf 8099998668916------88887336888689--7159-995999734981999967995--1431------0599848
Q 001455 858 KTIGVWQMVQRKL------ELIEVIATKEPIRK--LDTY-GKTIFASTQGHRMKVIDSSRT--LKDI------YRSKGIK 920 (1074)
Q Consensus 858 GtIrIWDi~tg~~------~~~~~~~h~~~V~s--ls~d-g~~LvsgS~DgtI~IWDl~~~--~~~l------~~~~~V~ 920 (1074)
+.+++|++.+... ......+|...+.+ +.++ +..+++++.|+.|++||+... ...+ .+...+.
T Consensus 130 ~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~ 209 (380)
T 3iz6_a 130 SACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVL 209 (380)
T ss_dssp SCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEE
T ss_pred CCEEEEECCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCEE
T ss_conf 85899989777555677331264068975468999964899789997799819999867795789960566788756769
Q ss_pred EEEEE--CCE-EEEEECCCCEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCCE
Q ss_conf 99973--998-999977992999983378200001565333478988389998189519999954999399997999971
Q 001455 921 SMSVV--QGK-IYIGCMDSSIQELAVSNNVEREIKAPFKSWRLQSKPINSLVVYKDWLYSASSSVEGSNIKEWRRHRKPQ 997 (1074)
Q Consensus 921 sIafs--dgk-LlsGs~DgsI~IwDl~tg~~~~i~~~~r~~~~h~~~I~sL~~spd~i~lvs~S~dDgtIkIWDl~s~~~ 997 (1074)
++.+. ++. +++|+.|+.|++||++.... ..+.+.+|...|.++.++|++.++++++ .|++|++||..++..
T Consensus 210 ~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~-----~~~~~~~h~~~v~~v~~~p~~~~l~s~s-~D~~i~lwd~~~~~~ 283 (380)
T 3iz6_a 210 SLSINSLNANMFISGSCDTTVRLWDLRITSR-----AVRTYHGHEGDINSVKFFPDGQRFGTGS-DDGTCRLFDMRTGHQ 283 (380)
T ss_dssp EEEECSSSCCEEEEEETTSCEEEEETTTTCC-----CCEEECCCSSCCCEEEECTTSSEEEEEC-SSSCEEEEETTTTEE
T ss_pred EEEEECCCCCEEEEEECCCEEEEEECCCCCC-----CEEEECCCCCCEEEEEEECCCCEEEEEC-CCCEEEEEECCCCCE
T ss_conf 9992069999899997898699997888973-----4699887488757999916999699983-899699998889968
Q ss_pred EEECCCCC-------CCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEE----ECC-CCEEEEEEC--CCEEEEEE
Q ss_conf 79706789-------87579999159999999979992999988999079998----079-976999972--99999997
Q 001455 998 ISIAPEKG-------TTIQAMAVVEDFIYLNYNSSASSLQIWLRGTQQKVGRI----SAG-SKITSLLTA--NDIVLCGT 1063 (1074)
Q Consensus 998 i~~l~gH~-------~~VtsIafSPDG~~LaSGS~DGtIrIWDl~tg~~I~tL----~~h-~~Vtsla~s--g~~LaSGs 1063 (1074)
...+..+. ..|++++|+|+|.++++|+.||.|++||..+++.+..+ .+| +.|++++|+ +++|++|+
T Consensus 284 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs 363 (380)
T 3iz6_a 284 LQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGS 363 (380)
T ss_dssp EEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEEC
T ss_pred EEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEEE
T ss_conf 89861565556655686389998899998999979997999988778157897023677778457999899999899960
Q ss_pred CCCCEEEEEC
Q ss_conf 9991999822
Q 001455 1064 ETGLIKGWIP 1073 (1074)
Q Consensus 1064 ~DG~IrIWdi 1073 (1074)
.||.|++|+.
T Consensus 364 ~D~~i~iW~~ 373 (380)
T 3iz6_a 364 WDKNLKIWAF 373 (380)
T ss_dssp TTSCEEEEEC
T ss_pred CCCCEEEEEC
T ss_conf 8998899953
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=1.00 E-value=1 Score=274.83 Aligned_cols=272 Identities=14% Similarity=0.179 Sum_probs=229.8
Q ss_pred CCCCCCEEEEEEE--CCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCC
Q ss_conf 7788768999992--98999998899299997799971379985147887799999479998999958980999986689
Q 001455 791 HKCSGAVTALIYY--KGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQMVQR 868 (1074)
Q Consensus 791 ~gH~~~VtsIafS--~~~LaSGs~DGtVrIWDi~s~~~~~i~tl~gH~~~VtsIafSpdg~~LaSGS~DGtIrIWDi~tg 868 (1074)
.+|.+.|++++|+ +.++++|+.||+|++||..++.. ...+..|...|.+++|+|++.++++|+.|+.|++|++.++
T Consensus 52 ~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~ 129 (340)
T 1got_B 52 RGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNK--VHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCE--EEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTC
T ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCC--CEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCC
T ss_conf 48778368999889999999981889689998999874--3376038861889999999999999808981999979668
Q ss_pred C---EEEEEEECCCCCEEEE--CCCCCEEEEEECCCEEEEEECCC--CEEEEEC-CCCEEEEEEE-CCE-EEEEECCCCE
Q ss_conf 1---6888873368886897--15999599973498199996799--5143105-9984899973-998-9999779929
Q 001455 869 K---LELIEVIATKEPIRKL--DTYGKTIFASTQGHRMKVIDSSR--TLKDIYR-SKGIKSMSVV-QGK-IYIGCMDSSI 938 (1074)
Q Consensus 869 ~---~~~~~~~~h~~~V~sl--s~dg~~LvsgS~DgtI~IWDl~~--~~~~l~~-~~~V~sIafs-dgk-LlsGs~DgsI 938 (1074)
. .......+|...+.++ .++ ..+++++.|+.|++||+.. ....+.. ...|.+++|+ ++. +++|+.|+.|
T Consensus 130 ~~~~~~~~~~~~h~~~v~~~~~~~~-~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v 208 (340)
T 1got_B 130 EGNVRVSRELAGHTGYLSCCRFLDD-NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASA 208 (340)
T ss_dssp SBSCEEEEEEECCSSCEEEEEEEET-TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCCEEEEEECCCCCCEEEEEECCC-CCEEEEECCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCE
T ss_conf 8861367784487763899998799-969999899929999899991889976999866899998999999999389939
Q ss_pred EEEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCCEEEECCC--CCCCEEEEEEECC
Q ss_conf 99983378200001565333478988389998189519999954999399997999971797067--8987579999159
Q 001455 939 QELAVSNNVEREIKAPFKSWRLQSKPINSLVVYKDWLYSASSSVEGSNIKEWRRHRKPQISIAPE--KGTTIQAMAVVED 1016 (1074)
Q Consensus 939 ~IwDl~tg~~~~i~~~~r~~~~h~~~I~sL~~spd~i~lvs~S~dDgtIkIWDl~s~~~i~~l~g--H~~~VtsIafSPD 1016 (1074)
++||+.++... ..+..|...|.++.++|++.++++++ .|++|++||...+.....+.. +...|++++|+|+
T Consensus 209 ~~wd~~~~~~~------~~~~~h~~~v~~v~~~p~~~~l~s~s-~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 281 (340)
T 1got_B 209 KLWDVREGMCR------QTFTGHESDINAICFFPNGNAFATGS-DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS 281 (340)
T ss_dssp EEEETTTCSEE------EEECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred EEEECCCCEEE------EEECCCCCCEEEEEECCCCCEEEEEC-CCCCEEEEECCCCCEEEEECCCCCCCCEEEEEECCC
T ss_conf 99778998167------89748768779999949999899974-898199998899918999726885241699999899
Q ss_pred CCEEEEEECCCCEEEEECCCCCEEEEEECC-CCEEEEEEC--CCEEEEEECCCCEEEEE
Q ss_conf 999999979992999988999079998079-976999972--99999997999199982
Q 001455 1017 FIYLNYNSSASSLQIWLRGTQQKVGRISAG-SKITSLLTA--NDIVLCGTETGLIKGWI 1072 (1074)
Q Consensus 1017 G~~LaSGS~DGtIrIWDl~tg~~I~tL~~h-~~Vtsla~s--g~~LaSGs~DG~IrIWd 1072 (1074)
|.++++|+.|+.|++||..++..+..+.+| +.|++++|+ +.+|++|+.||.|++|+
T Consensus 282 g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 282 GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEECC
T ss_conf 99999977999099988413838658505778488999829999899972886189559
No 6
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=1.00 E-value=1 Score=271.22 Aligned_cols=272 Identities=17% Similarity=0.245 Sum_probs=226.5
Q ss_pred CCCCCEEEEEEE---CCEEEEEECCCCEEEEECCCCCE---EEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEEC
Q ss_conf 788768999992---98999998899299997799971---379985147887799999479998999958980999986
Q 001455 792 KCSGAVTALIYY---KGLLCSGFSDGSIKMWDIKKQSA---MLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQM 865 (1074)
Q Consensus 792 gH~~~VtsIafS---~~~LaSGs~DGtVrIWDi~s~~~---~~i~tl~gH~~~VtsIafSpdg~~LaSGS~DGtIrIWDi 865 (1074)
+|.+.|++++|+ ++++++|+.||+|++|++..... .....+.+|...|.+++|+|++.+|++|+.||+|++||+
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~ 459 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDL 459 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CCCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEEC
T ss_conf 67740699986699888899980899489997568875555333242588884799999799999999808992899979
Q ss_pred CCCCEEEEEEECCCCCEEE--ECCCCCEEEEEECCCEEEEEECCCCEE-EEE-----CCCCEEEEEEE-CC---EEEEEE
Q ss_conf 6891688887336888689--715999599973498199996799514-310-----59984899973-99---899997
Q 001455 866 VQRKLELIEVIATKEPIRK--LDTYGKTIFASTQGHRMKVIDSSRTLK-DIY-----RSKGIKSMSVV-QG---KIYIGC 933 (1074)
Q Consensus 866 ~tg~~~~~~~~~h~~~V~s--ls~dg~~LvsgS~DgtI~IWDl~~~~~-~l~-----~~~~V~sIafs-dg---kLlsGs 933 (1074)
.++... ....+|...|.+ |++++..+++++.|+.|++||...... .+. +...|.++.|+ ++ .+++++
T Consensus 460 ~~~~~~-~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s 538 (694)
T 3dm0_A 460 AAGVST-RRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSAS 538 (694)
T ss_dssp TTTEEE-EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEE
T ss_pred CCCCCE-EEEECCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCCEEECCCCCCCCCCEEEEEEECCCCCCEEEEEE
T ss_conf 999513-6886799988999990899989999488979999789985404303778887867999991798865599996
Q ss_pred CCCCEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCCEEEECCCCCCCEEEEEE
Q ss_conf 79929999833782000015653334789883899981895199999549993999979999717970678987579999
Q 001455 934 MDSSIQELAVSNNVEREIKAPFKSWRLQSKPINSLVVYKDWLYSASSSVEGSNIKEWRRHRKPQISIAPEKGTTIQAMAV 1013 (1074)
Q Consensus 934 ~DgsI~IwDl~tg~~~~i~~~~r~~~~h~~~I~sL~~spd~i~lvs~S~dDgtIkIWDl~s~~~i~~l~gH~~~VtsIaf 1013 (1074)
.|+.|++||+.++... ..+.+|...|.++.++|++.++++++ .|+.|++||..++..+..+.. ...|.+++|
T Consensus 539 ~d~~v~vwd~~~~~~~------~~~~~h~~~v~~v~~spdg~~l~sg~-~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~ 610 (694)
T 3dm0_A 539 WDKTVKVWNLSNCKLR------STLAGHTGYVSTVAVSPDGSLCASGG-KDGVVLLWDLAEGKKLYSLEA-NSVIHALCF 610 (694)
T ss_dssp TTSCEEEEETTTCCEE------EEECCCSSCEEEEEECTTSSEEEEEE-TTSBCEEEETTTTEEEECCBC-SSCEEEEEE
T ss_pred CCCEEEEEECCCCCEE------EEECCCCCCEEEEEEECCCCEEEEEE-CCCEEEEEECCCCCEEEEECC-CCCEEEEEE
T ss_conf 8985999989999278------99867888888999918989899995-899499998899956788338-994789998
Q ss_pred ECCCCEEEEEECCCCEEEEECCCCCEEEEEECCC--------------------CEEEEEEC--CCEEEEEECCCCEEEE
Q ss_conf 1599999999799929999889990799980799--------------------76999972--9999999799919998
Q 001455 1014 VEDFIYLNYNSSASSLQIWLRGTQQKVGRISAGS--------------------KITSLLTA--NDIVLCGTETGLIKGW 1071 (1074)
Q Consensus 1014 SPDG~~LaSGS~DGtIrIWDl~tg~~I~tL~~h~--------------------~Vtsla~s--g~~LaSGs~DG~IrIW 1071 (1074)
+|++.++++++ |+.|++||+.++..+..+..+. .+++++|+ +++|++|+.||.|++|
T Consensus 611 sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW 689 (694)
T 3dm0_A 611 SPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVW 689 (694)
T ss_dssp CSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred CCCCCEEEEEC-CCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCEEEEE
T ss_conf 59986899976-99789998999987332002456532002456645677404775148986899989997589849998
Q ss_pred EC
Q ss_conf 22
Q 001455 1072 IP 1073 (1074)
Q Consensus 1072 di 1073 (1074)
++
T Consensus 690 ~i 691 (694)
T 3dm0_A 690 GI 691 (694)
T ss_dssp EC
T ss_pred EC
T ss_conf 53
No 7
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=1.00 E-value=1 Score=269.21 Aligned_cols=277 Identities=15% Similarity=0.230 Sum_probs=228.7
Q ss_pred CCCCCEEEEEEE--CCEEEEEECCCCEEEEECCCCCEEEEEEECCCC------------------CCEEEEEECCCCCEE
Q ss_conf 788768999992--989999988992999977999713799851478------------------877999994799989
Q 001455 792 KCSGAVTALIYY--KGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHR------------------KAVTSFSLFEPGESL 851 (1074)
Q Consensus 792 gH~~~VtsIafS--~~~LaSGs~DGtVrIWDi~s~~~~~i~tl~gH~------------------~~VtsIafSpdg~~L 851 (1074)
+|.+.|++++|+ +.++++|+ |+++++|++.++.. +..+..|. ..|++++|+|++++|
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l 138 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSL--VARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 138 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCE--EEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred CCCCEEEEEEECCCCCEEEEEC-CCCEEEEEECCCCE--EEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEE
T ss_conf 8998899999999998999982-99489999148978--99965766554566533345567885069999999999999
Q ss_pred EEEECCCEEEEEECCCCCEEEEEEECCCCCEEE--ECCCCCEEEEEECCCEEEEEECCC--CEEEEECCCCEEEEEEE--
Q ss_conf 999589809999866891688887336888689--715999599973498199996799--51431059984899973--
Q 001455 852 LSGSADKTIGVWQMVQRKLELIEVIATKEPIRK--LDTYGKTIFASTQGHRMKVIDSSR--TLKDIYRSKGIKSMSVV-- 925 (1074)
Q Consensus 852 aSGS~DGtIrIWDi~tg~~~~~~~~~h~~~V~s--ls~dg~~LvsgS~DgtI~IWDl~~--~~~~l~~~~~V~sIafs-- 925 (1074)
++|+.|++|++||+.+++.. ....+|...|.+ |++++..+++++.|+.|++||+.. ....+.....+.+++++
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~-~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~ 217 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIV-MILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPG 217 (393)
T ss_dssp EEEETTSCEEEEETTTTEEE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECST
T ss_pred EEECCCCEEEEEECCCCCEE-EEECCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEEECC
T ss_conf 99819993999978988487-99716988777999938999999966999389997889906789976899689999899
Q ss_pred CCE-EEEEECCCCEEEEECCCCCEEEEC-CCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCC--------
Q ss_conf 998-999977992999983378200001-5653334789883899981895199999549993999979999--------
Q 001455 926 QGK-IYIGCMDSSIQELAVSNNVEREIK-APFKSWRLQSKPINSLVVYKDWLYSASSSVEGSNIKEWRRHRK-------- 995 (1074)
Q Consensus 926 dgk-LlsGs~DgsI~IwDl~tg~~~~i~-~~~r~~~~h~~~I~sL~~spd~i~lvs~S~dDgtIkIWDl~s~-------- 995 (1074)
++. +++|+.|+.|++||+.++...... .......+|...|.++.+++++.++++++ .|+.|++||+...
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-~d~~v~~wd~~~~~~~~~~~~ 296 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS-LDRSVKLWNLQNANNKSDSKT 296 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEEC-----------
T ss_pred CCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEE-CCCEEEEEECCCCCCCCCCCC
T ss_conf 9999999939992899999999688760256667789888779999979999999994-999899998988777655557
Q ss_pred ----CEEEECCCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECC-CCEEEEEEC--------CCEEEEE
Q ss_conf ----717970678987579999159999999979992999988999079998079-976999972--------9999999
Q 001455 996 ----PQISIAPEKGTTIQAMAVVEDFIYLNYNSSASSLQIWLRGTQQKVGRISAG-SKITSLLTA--------NDIVLCG 1062 (1074)
Q Consensus 996 ----~~i~~l~gH~~~VtsIafSPDG~~LaSGS~DGtIrIWDl~tg~~I~tL~~h-~~Vtsla~s--------g~~LaSG 1062 (1074)
.+...+.+|...|.+++|+|++.++++|+.|+.|++||..+++.+..+.+| +.|.+++|. +++|++|
T Consensus 297 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sg 376 (393)
T 1erj_A 297 PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATG 376 (393)
T ss_dssp ----CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEE
T ss_pred CCCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEE
T ss_conf 78872127883556848999988999999999089959998889995999978877877899963776768878999998
Q ss_pred ECCCCEEEEEC
Q ss_conf 79991999822
Q 001455 1063 TETGLIKGWIP 1073 (1074)
Q Consensus 1063 s~DG~IrIWdi 1073 (1074)
+.||+|++|+.
T Consensus 377 s~Dg~i~iW~~ 387 (393)
T 1erj_A 377 SGDCKARIWKY 387 (393)
T ss_dssp ETTSEEEEEEE
T ss_pred CCCCCEEECCC
T ss_conf 89990997716
No 8
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=1.00 E-value=1 Score=268.68 Aligned_cols=275 Identities=12% Similarity=0.072 Sum_probs=222.5
Q ss_pred CCCCCEEEEEEE--CCEEEEEEC------CCCEEEEECCCCCEE--EEEEECCCCCCEEEEEECCCCCEEEEEECCCEEE
Q ss_conf 788768999992--989999988------992999977999713--7998514788779999947999899995898099
Q 001455 792 KCSGAVTALIYY--KGLLCSGFS------DGSIKMWDIKKQSAM--LVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIG 861 (1074)
Q Consensus 792 gH~~~VtsIafS--~~~LaSGs~------DGtVrIWDi~s~~~~--~i~tl~gH~~~VtsIafSpdg~~LaSGS~DGtIr 861 (1074)
+|.+.|++++|+ +.+|++|+. |+.|++|+..++... ......+|...|++++|+|++. +++++.||+|+
T Consensus 40 ~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~ 118 (357)
T 4g56_B 40 CMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVE 118 (357)
T ss_dssp CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEE
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCEEEEEECCCCC-EEEEECCCEEE
T ss_conf 21078899999899999999828987132686999789998714058502478879879999968998-99998999899
Q ss_pred EEECCCCCEEE---EEEECCCCCEEE--ECCCCCEEEEEECCCEEEEEECCCC--EEEEEC-CCCEEEEEEE-CC--EEE
Q ss_conf 99866891688---887336888689--7159995999734981999967995--143105-9984899973-99--899
Q 001455 862 VWQMVQRKLEL---IEVIATKEPIRK--LDTYGKTIFASTQGHRMKVIDSSRT--LKDIYR-SKGIKSMSVV-QG--KIY 930 (1074)
Q Consensus 862 IWDi~tg~~~~---~~~~~h~~~V~s--ls~dg~~LvsgS~DgtI~IWDl~~~--~~~l~~-~~~V~sIafs-dg--kLl 930 (1074)
+||+.+++... ....+|...|.+ |++++..+++++.|+.|++||+... ...+.. ...|.+++|+ ++ .++
T Consensus 119 lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~ 198 (357)
T 4g56_B 119 LWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFL 198 (357)
T ss_dssp EC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEE
T ss_pred EEECCCCCEEEEEEECCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCEEE
T ss_conf 93445664047874213788898899999799899999969893999989999599998277897889998368872266
Q ss_pred EEECCCCEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCC-EEEEEEECCCCEEEEEECCCCCEEEECCCCCCCEE
Q ss_conf 99779929999833782000015653334789883899981895-19999954999399997999971797067898757
Q 001455 931 IGCMDSSIQELAVSNNVEREIKAPFKSWRLQSKPINSLVVYKDW-LYSASSSVEGSNIKEWRRHRKPQISIAPEKGTTIQ 1009 (1074)
Q Consensus 931 sGs~DgsI~IwDl~tg~~~~i~~~~r~~~~h~~~I~sL~~spd~-i~lvs~S~dDgtIkIWDl~s~~~i~~l~gH~~~Vt 1009 (1074)
+++.|+.|++||+.+++..... ....+...+.++.++|++ .++++++ .|+.|++||..++.....+.+|...|+
T Consensus 199 s~~~dg~v~~wd~~~~~~~~~~----~~~~~~~~v~~v~~sp~~~~~la~g~-~d~~i~~wd~~~~~~~~~~~~~~~~v~ 273 (357)
T 4g56_B 199 SCGEDGRILLWDTRKPKPATRI----DFCASDTIPTSVTWHPEKDDTFACGD-ETGNVSLVNIKNPDSAQTSAVHSQNIT 273 (357)
T ss_dssp EEETTSCEEECCTTSSSCBCBC----CCTTCCSCEEEEEECTTSTTEEEEEE-SSSCEEEEESSCGGGCEEECCCSSCEE
T ss_pred EECCCCCEEEEECCCCCEEEEE----EECCCCCCCCCHHHHHCCCCEEEEEE-CCCCEEEEECCCCCEEEEEECCCEEEE
T ss_conf 5505786388788999640123----30023344421111213530599821-354206898999958289935531387
Q ss_pred EEEEECCC-CEEEEEECCCCEEEEECCCCCEEEEEECC-CCEEEEEEC---CCEEEEEECCCCEEEEEC
Q ss_conf 99991599-99999979992999988999079998079-976999972---999999979991999822
Q 001455 1010 AMAVVEDF-IYLNYNSSASSLQIWLRGTQQKVGRISAG-SKITSLLTA---NDIVLCGTETGLIKGWIP 1073 (1074)
Q Consensus 1010 sIafSPDG-~~LaSGS~DGtIrIWDl~tg~~I~tL~~h-~~Vtsla~s---g~~LaSGs~DG~IrIWdi 1073 (1074)
+++|+|++ .+|++|+.|++|++||.++++.+..+ +| +.|++++|+ +.+|++|+.||+|++|++
T Consensus 274 ~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 274 GLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp EEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred EEEECCCCCCEEEEEECCCEEEEEECCCCCEEEEC-CCCCCEEEEEEECCCCCEEEEECCCCEEEEEEC
T ss_conf 79976899989999958997999989999586978-899988999995899999999918995999977
No 9
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=1.00 E-value=1 Score=267.68 Aligned_cols=272 Identities=13% Similarity=0.158 Sum_probs=229.6
Q ss_pred CCCCCEEEEEEE--CCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCC
Q ss_conf 788768999992--989999988992999977999713799851478877999994799989999589809999866891
Q 001455 792 KCSGAVTALIYY--KGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQMVQRK 869 (1074)
Q Consensus 792 gH~~~VtsIafS--~~~LaSGs~DGtVrIWDi~s~~~~~i~tl~gH~~~VtsIafSpdg~~LaSGS~DGtIrIWDi~tg~ 869 (1074)
+|.+.|++++|+ +.++++|+.||+|++||..++.. ...+..|...|.+++|+|++..+++|+.|+.+++|++....
T Consensus 62 gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~--~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~ 139 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNK--EHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDK 139 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE--EEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCT
T ss_pred CCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCC--CEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEEEECCC
T ss_conf 8898088999989999899992898299998999875--35774278877999998999979971389988999974256
Q ss_pred -----EEEEEEECCCCCEEE--ECCCCCEEEEEECCCEEEEEECCC--CEEEEEC-CCCEEEEEEE---CC-EEEEEECC
Q ss_conf -----688887336888689--715999599973498199996799--5143105-9984899973---99-89999779
Q 001455 870 -----LELIEVIATKEPIRK--LDTYGKTIFASTQGHRMKVIDSSR--TLKDIYR-SKGIKSMSVV---QG-KIYIGCMD 935 (1074)
Q Consensus 870 -----~~~~~~~~h~~~V~s--ls~dg~~LvsgS~DgtI~IWDl~~--~~~~l~~-~~~V~sIafs---dg-kLlsGs~D 935 (1074)
........|...+.+ |++++..+++++.|+.|++||+.. ....+.. ...|.++.+. ++ .+++|+.|
T Consensus 140 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~D 219 (354)
T 2pbi_B 140 NENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCD 219 (354)
T ss_dssp TCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETT
T ss_pred CCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEEEECCCCCEEEEEECC
T ss_conf 65533331163066784789999689999999918995899767778199999278998699998757999999999479
Q ss_pred CCEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCCEEEECCCC--CCCEEEEEE
Q ss_conf 929999833782000015653334789883899981895199999549993999979999717970678--987579999
Q 001455 936 SSIQELAVSNNVEREIKAPFKSWRLQSKPINSLVVYKDWLYSASSSVEGSNIKEWRRHRKPQISIAPEK--GTTIQAMAV 1013 (1074)
Q Consensus 936 gsI~IwDl~tg~~~~i~~~~r~~~~h~~~I~sL~~spd~i~lvs~S~dDgtIkIWDl~s~~~i~~l~gH--~~~VtsIaf 1013 (1074)
+.|++||+.++... ..+..|...|.++.++|++.++++++ .|++|++||+........+..+ ...+.+++|
T Consensus 220 g~v~~wd~~~~~~~------~~~~~h~~~v~~v~~~p~~~~l~s~s-~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (354)
T 2pbi_B 220 KKAMVWDMRSGQCV------QAFETHESDVNSVRYYPSGDAFASGS-DDATCRLYDLRADREVAIYSKESIIFGASSVDF 292 (354)
T ss_dssp SCEEEEETTTCCEE------EEECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred CEEEEEECCCCCEE------EEECCCCCCEEEEEEECCCCEEEEEE-CCCEEEEEECCCCCEEEEECCCCCCCCEEEEEE
T ss_conf 95999988899277------98358878817999958999899996-998199998889967888747874034559999
Q ss_pred ECCCCEEEEEECCCCEEEEECCCCCEEEEEECC-CCEEEEEEC--CCEEEEEECCCCEEEEE
Q ss_conf 159999999979992999988999079998079-976999972--99999997999199982
Q 001455 1014 VEDFIYLNYNSSASSLQIWLRGTQQKVGRISAG-SKITSLLTA--NDIVLCGTETGLIKGWI 1072 (1074)
Q Consensus 1014 SPDG~~LaSGS~DGtIrIWDl~tg~~I~tL~~h-~~Vtsla~s--g~~LaSGs~DG~IrIWd 1072 (1074)
+|++.++++|+.|+.|++||..+++.+..+.+| +.|++++|+ +++|++|+.||.|++|+
T Consensus 293 s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 293 SLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ECCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEECC
T ss_conf 47999999997899299998988955779987899578999989999999982888889619
No 10
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=267.35 Aligned_cols=279 Identities=14% Similarity=0.148 Sum_probs=221.8
Q ss_pred CCCCCCEEEEEEE-C-C-EEEEEECCCCEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCC
Q ss_conf 7788768999992-9-8-99999889929999779997137998514788779999947999899995898099998668
Q 001455 791 HKCSGAVTALIYY-K-G-LLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQMVQ 867 (1074)
Q Consensus 791 ~gH~~~VtsIafS-~-~-~LaSGs~DGtVrIWDi~s~~~~~i~tl~gH~~~VtsIafSpdg~~LaSGS~DGtIrIWDi~t 867 (1074)
.+|.+.|++++|+ + . .+++|+.|++|++||...++ ...++.+|.+.|++++|+|++..|++|+.|++|++||..+
T Consensus 144 ~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~--~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~ 221 (611)
T 1nr0_A 144 TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK--FKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD 221 (611)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE--EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCCCCCCEEEEECCCCCEEEEEEECCCEEEEEECCCCE--EEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCC
T ss_conf 47889836999889998299999289809999799975--7665200257169999979999899998999199988999
Q ss_pred CCEEEEEEE------CCCCCEEE--ECCCCCEEEEEECCCEEEEEECCCC--EE--------------------------
Q ss_conf 916888873------36888689--7159995999734981999967995--14--------------------------
Q 001455 868 RKLELIEVI------ATKEPIRK--LDTYGKTIFASTQGHRMKVIDSSRT--LK-------------------------- 911 (1074)
Q Consensus 868 g~~~~~~~~------~h~~~V~s--ls~dg~~LvsgS~DgtI~IWDl~~~--~~-------------------------- 911 (1074)
++....... +|...|.+ |+|++..+++++.|++|++||+... ..
T Consensus 222 g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s 301 (611)
T 1nr0_A 222 GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSIS 301 (611)
T ss_dssp CCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEE
T ss_pred CCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCEEEEEE
T ss_conf 82866513664323566787899999799999999908980999968887013440478876640689997388799995
Q ss_pred -----------------EEE-CCCCEEEEEEE-CCE-EEEEECCCCEEEEECCCCCEEEECCC-----------------
Q ss_conf -----------------310-59984899973-998-99997799299998337820000156-----------------
Q 001455 912 -----------------DIY-RSKGIKSMSVV-QGK-IYIGCMDSSIQELAVSNNVEREIKAP----------------- 954 (1074)
Q Consensus 912 -----------------~l~-~~~~V~sIafs-dgk-LlsGs~DgsI~IwDl~tg~~~~i~~~----------------- 954 (1074)
.+. +...|.+++|+ +++ +++++.|+.|++||+.++........
T Consensus 302 ~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l 381 (611)
T 1nr0_A 302 ANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDL 381 (611)
T ss_dssp TTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCE
T ss_pred CCCCEEEEECCCCCCCEEECCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEECCCCCCCEEEEEEECCCCCE
T ss_conf 89968999688997446983788888999991899989999589849999788792563216677650789998789969
Q ss_pred --------CCCCC---------------------------------------------------CCCCCEEEEEECCCCE
Q ss_conf --------53334---------------------------------------------------7898838999818951
Q 001455 955 --------FKSWR---------------------------------------------------LQSKPINSLVVYKDWL 975 (1074)
Q Consensus 955 --------~r~~~---------------------------------------------------~h~~~I~sL~~spd~i 975 (1074)
.+.|. .+...+.++.++|++.
T Consensus 382 ~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~ 461 (611)
T 1nr0_A 382 FTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQ 461 (611)
T ss_dssp EEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSC
T ss_pred EEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCEEEEEECCEEEEEECCCEEEEECCCCCEEEEEECCCC
T ss_conf 99984896689546885435652120014899707998079969999967639998489434640688954999928998
Q ss_pred EEEEEECCCCEEEEEECCCCCE--EEECCCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCC-CCEEEE--EECC-CCE
Q ss_conf 9999954999399997999971--797067898757999915999999997999299998899-907999--8079-976
Q 001455 976 YSASSSVEGSNIKEWRRHRKPQ--ISIAPEKGTTIQAMAVVEDFIYLNYNSSASSLQIWLRGT-QQKVGR--ISAG-SKI 1049 (1074)
Q Consensus 976 ~lvs~S~dDgtIkIWDl~s~~~--i~~l~gH~~~VtsIafSPDG~~LaSGS~DGtIrIWDl~t-g~~I~t--L~~h-~~V 1049 (1074)
++++++ .|++|++||...+.. ... .+|...|++++|+|||++|++++.|++|++|+..+ ++.+.. +.+| ..|
T Consensus 462 ~lasgs-~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V 539 (611)
T 1nr0_A 462 FVAVGG-QDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKV 539 (611)
T ss_dssp EEEEEE-TTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCE
T ss_pred EEEEEC-CCCEEEEEECCCCCEEEEEC-CCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCEEEEEEEEECCCCE
T ss_conf 999968-99739999945992224101-5778860799998999989999489989998857787223210264046642
Q ss_pred EEEEEC--CCEEEEEECCCCEEEEEC
Q ss_conf 999972--999999979991999822
Q 001455 1050 TSLLTA--NDIVLCGTETGLIKGWIP 1073 (1074)
Q Consensus 1050 tsla~s--g~~LaSGs~DG~IrIWdi 1073 (1074)
++++|+ +++|++|+.|++|++|++
T Consensus 540 ~~v~fspdg~~lasgs~D~~v~lW~~ 565 (611)
T 1nr0_A 540 ACVSWSPDNVRLATGSLDNSVIVWNM 565 (611)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEECCCCCEEEEEECCCCEEEEEC
T ss_conf 58998998997999979972999978
Done!