BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 001458
         (1074 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|451798990|gb|AGF69193.1| TMV resistance protein N-like protein 7 [Vitis labrusca]
          Length = 1335

 Score =  726 bits (1873), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/1105 (41%), Positives = 638/1105 (57%), Gaps = 130/1105 (11%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M+SR E +  L+  GS DVRM+GI GM G+GKTTIA+V+Y+ I  +FE   FL NVRE S
Sbjct: 193  MESRLEAMDSLLCIGSLDVRMVGIWGMAGIGKTTIAKVIYERIYTQFEGCCFLSNVREES 252

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
             K GL  LQ +LLSQ+LK  + +      GI+ +   L  +KVL+++DDV   KQL+ LA
Sbjct: 253  YKHGLPYLQMELLSQILKERNPNAGLFNKGINFMKDVLHSRKVLIILDDVDQRKQLEDLA 312

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            G+  WFGSGSRIIIT+RD HLL    VD +Y+   L+ DEAL+LF + AF+     ++  
Sbjct: 313  GDNNWFGSGSRIIITTRDRHLLTCQEVDAIYEVKELDNDEALKLFCLYAFRHKHGTEDFR 372

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            QL    + Y  GLPLAL+VLGS L  + + EW+S L++L+  P  E+ ++L+ SF+GL +
Sbjct: 373  QLCGHALDYTSGLPLALKVLGSSLYTKGIHEWKSELDKLKQFPNKEVQNVLKTSFEGLDD 432

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             E+ IFLDIA F+KG+D+D+V + L+ CGF   IGIR L +K LIT+  N L MHDLLQE
Sbjct: 433  NEQNIFLDIAFFYKGHDKDFVGDILDSCGFFFGIGIRNLEDKSLITISENKLCMHDLLQE 492

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G +IV RQ  E  G+RSRL   E++ HVLT +TGTE VEGI LD    +    L  S  
Sbjct: 493  MGWEIV-RQKSEVPGERSRLRVHEDINHVLTTNTGTEAVEGIFLDLSASKE---LNFSID 548

Query: 361  AFSKMTNLRLLKICNLQLPNGLEYLS---------------------------------- 386
            AF+KM  LRLLKICN+Q+   L YLS                                  
Sbjct: 549  AFTKMKRLRLLKICNVQIDRSLGYLSKKELIAYTHDVWIERNYLYTQNKLHLYEDSKFLS 608

Query: 387  NRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLI 446
            N LR L W GYPLK  PSN   +K +E+ MC+SR+ + W+G K  +KLK + LSHS++L 
Sbjct: 609  NNLRDLYWHGYPLKSFPSNFHPEKLVELNMCFSRLKQPWEGKKGFEKLKSIKLSHSQHLT 668

Query: 447  RMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEK 506
            ++PDF+G PNL +LIL+GCT L E+HPS+    KLI LN++ C  L +    I M+SL+ 
Sbjct: 669  KIPDFSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIHMESLQI 728

Query: 507  LNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELL 566
            L L                  SG  K ++FPE+  +MEHL  L LEGTAI+GLPLSIE L
Sbjct: 729  LTL------------------SGCSKLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENL 770

Query: 567  SGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS 626
            +GL LLNLK C+SLE LP ++  LK L++L LS C++LKK PEI  +M+ L ELFLDG+ 
Sbjct: 771  TGLALLNLKECKSLESLPRSIFKLKSLKTLILSNCTRLKKLPEIQENMESLMELFLDGSG 830

Query: 627  IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIE 686
            I E+PSSI  L  L  LNL +CK L  LP S   L SL+TL L GC +L+++P+ LG ++
Sbjct: 831  IIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLRTLTLCGCSELKDLPDNLGSLQ 890

Query: 687  SLEELDISGTAV---PHSTSWYSYIPI--------------NLM-----RKSVALKLPSL 724
             L EL+  G+ V   P S +  + + I              N++       +  L+LPS 
Sbjct: 891  CLTELNADGSGVQEVPPSITLLTNLQILSLAGCKGGESKSRNMIFSFHSSPTEELRLPSF 950

Query: 725  SGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELE 784
            SGL SLR L L  CNL EGALPSD+G++ SL+ L LS+NSF+++P S++ LS+L ++ LE
Sbjct: 951  SGLYSLRVLILQRCNLSEGALPSDLGSIPSLERLDLSRNSFITIPASLSGLSRLRSLTLE 1010

Query: 785  DCKRLQSLPQLPPNIRQVRVNGCASLVTLL-------------------DALKLCKSDST 825
             CK LQSLP+LP ++  +  + C SL T                     +  +L ++  +
Sbjct: 1011 YCKSLQSLPELPSSVESLNAHSCTSLETFTCSSSAYTSKKFGDLRFNFTNCFRLGENQGS 1070

Query: 826  MI--ACLDSLKLLGNKSLAFSMLREYL---EAVSNTRQHLSVVVPGSEIPEWFMYQNEGS 880
             I  A L+ ++L+       S + ++L     +       + +VPG+ IPEWF +Q+ G 
Sbjct: 1071 DIVGAILEGIQLM-------SSIPKFLVPDRGIPTPHNEYNALVPGNRIPEWFRHQSVGC 1123

Query: 881  SITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYP-THQLNCHIG--------H 931
            S+ +  P + YN  KL+G A C   +      GN   G+ P +  L C++         H
Sbjct: 1124 SVNIELPQHWYN-TKLMGLAFCAALNFKGAMDGNP--GTEPSSFGLVCYLNDCFVETGLH 1180

Query: 932  GIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGL 991
             +Y      KF +  SDH    Y+S      + + L +      S++V  SF    G   
Sbjct: 1181 SLYTPPEGSKFIE--SDHTLFEYISLAR---LEICLGNWFRKL-SDNVVASF-ALTGSDG 1233

Query: 992  EVKMCGLHPVYMDEVEELDQTTNQP 1016
            EVK CG+  VY  E +E D   + P
Sbjct: 1234 EVKKCGIRLVY--EEDEKDGGCSFP 1256


>gi|359486073|ref|XP_002272820.2| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 1296

 Score =  722 bits (1863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/1071 (42%), Positives = 630/1071 (58%), Gaps = 116/1071 (10%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MDS  +K+  L+  GS DVRM+GI GM G+GKTTIA  VY  I  +FE   FL NVRE S
Sbjct: 203  MDSHIQKMFSLLRIGSDDVRMVGIWGMAGIGKTTIAEAVYQKIRTQFEGCCFLSNVREKS 262

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
                   +Q +LLSQ+ +  + +   +  GI+++   L   +VL+V+DDV   +QL+ LA
Sbjct: 263  QNNDPAVIQMKLLSQIFEKGNLNTGLLSGGINVIEKTLHSMRVLIVLDDVDCPQQLEVLA 322

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            GN  WFG GSRIIIT+R++HLL      E+Y    LN DEA +LF   AFK   P  + V
Sbjct: 323  GNHNWFGPGSRIIITTREKHLLDEKV--EIYIVKELNKDEARKLFYQHAFKYKPPAGDFV 380

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            QL  R + Y  G+PLAL++LG FL  RS  EW S LE+L   P +EI D+L+ISFDGL +
Sbjct: 381  QLCDRALNYTKGIPLALKILGRFLYNRSKKEWESELEKLRRIPNNEIQDVLRISFDGLDD 440

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             +K IFLDIACFFKG D+DYV   L+ C F P IGIR LI+K L+T+  N L MHDL+Q+
Sbjct: 441  NQKDIFLDIACFFKGQDKDYVIKLLKSCDFFPEIGIRNLIDKSLVTISYNKLCMHDLIQK 500

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G +IV+++S ++ GKRSRLW  ++V  +LT +TGTE VEG+VL N     E++   S  
Sbjct: 501  MGWEIVRQESIKDPGKRSRLWVNDDVIDMLTTNTGTEAVEGMVL-NLSTLKELHF--SVN 557

Query: 361  AFSKMTNLRLLKI------------------------CNLQLPNGLEYLSNRLRLLGWRG 396
             F+KM  LR+L+                         C   L    ++LSN LR L W G
Sbjct: 558  VFTKMNKLRVLRFYDAQIWGSSWIWRRNDRYKSPYTECKFHLSGDFKFLSNHLRSLYWDG 617

Query: 397  YPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPN 456
            YPLK LPSN   +K +E+ MC+S++ +LW+G K   KLK + LSHS++LI+ PDF+GAP 
Sbjct: 618  YPLKSLPSNFHPEKLLELKMCFSQLEQLWEGNKSFQKLKFIELSHSQHLIKTPDFSGAPK 677

Query: 457  LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
            L ++ILEGCT L ++HPS+    KLI LN++ C                  NLKS  ++I
Sbjct: 678  LRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCK-----------------NLKSFLSSI 720

Query: 517  SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
              L+ L  L +SG  K ++FPE+   M++ SEL L+GTAI+GLPLSIE L+GL LLNL+ 
Sbjct: 721  H-LESLQILTLSGCSKLKKFPEVQGPMDNFSELSLKGTAIKGLPLSIEYLNGLALLNLEE 779

Query: 577  CRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIEL 636
            C+SLE LP  +  LK L++L LS CS+LKK PEI  +M+ L ELFLD T ++E+PSSIE 
Sbjct: 780  CKSLESLPSCIFKLKSLKTLILSNCSRLKKLPEIGENMESLKELFLDDTGLRELPSSIEH 839

Query: 637  LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
            L  L LL L +CK L  LP S   L SL+TL LSGC +L+ +P+ +G ++ L +L  +G+
Sbjct: 840  LNGLVLLKLKNCKRLASLPESFCKLTSLQTLTLSGCSELKKLPDDMGSLQCLLKLKANGS 899

Query: 697  A---VPHSTSWYSYIPI--------------NL---MRKSV--ALKLPSLSGLCSLRKLN 734
                VP S +  + + +              NL   +R S    L+L SL+ L SL+KLN
Sbjct: 900  GIQEVPTSITLLTKLQVLSLAGCKGGGSKSKNLALSLRASPTDGLRLSSLTVLHSLKKLN 959

Query: 735  LTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ 794
            L+DCNL+EGALPSD+ +L  L+ L LS+NSF+++P S++ L +L  + LE CK L+SLP+
Sbjct: 960  LSDCNLLEGALPSDLSSLSWLECLDLSRNSFITVP-SLSRLPRLERLILEHCKSLRSLPE 1018

Query: 795  LPPNIRQVRVNGCASLVTL-------------------LDALKLCKSDST--MIACLDSL 833
            LP ++ ++  N C SL T+                    +  +L +++ +  + A L  +
Sbjct: 1019 LPSSVEELLANDCTSLETISNPSSAYAWRNSGHLYSEFCNCFRLVENEQSDNVEAILRGI 1078

Query: 834  KLLGN--KSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLY 891
            +L+ +   S+A S ++  L  V +       VVPGS IPEWF +Q+E  S+TV  P +  
Sbjct: 1079 RLVASIPNSVAPSDIQRDLSIVYD------AVVPGSSIPEWFTHQSERCSVTVELPPHWC 1132

Query: 892  NKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLW 951
            N  +L+G A+C VFH    + G   FG      +N   G  ++       F +A  DH+W
Sbjct: 1133 N-TRLMGLAVCVVFHA---NIGMGKFGRSAYFSMNESGGFSLHNT-VSMHFSKA--DHIW 1185

Query: 952  LLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVY 1002
              Y           PL  ++     +H+ VSF      G  VK CG+  V+
Sbjct: 1186 FGY----------RPLFGDVFSSSIDHLKVSFAGSNRAGEVVKKCGVRLVF 1226


>gi|359486075|ref|XP_002273047.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1291

 Score =  721 bits (1860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/1066 (42%), Positives = 618/1066 (57%), Gaps = 107/1066 (10%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MDS  + +  L+  GS DVRM+GI GM G+GKTTIA  VY  I  +FE   FL NVRE S
Sbjct: 198  MDSHIQNMVSLLCIGSDDVRMVGIWGMAGIGKTTIAEAVYQKICTQFEGCCFLSNVREKS 257

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
             K     +Q +LLSQ+    + +      GI+ +   L   +VL+V+DDV   +QL+ LA
Sbjct: 258  QKNDPAVIQMELLSQVFWEGNLNTRIFNRGINAIKKTLHSMRVLIVLDDVDRPQQLEVLA 317

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            GN  WFG GSRIIIT+R++HLL      E+Y+   LN DEA +LF   AFK   P  + V
Sbjct: 318  GNHNWFGPGSRIIITTREKHLLDEKV--EIYEVKELNKDEARRLFYQHAFKYKPPAGDFV 375

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            QL  R + Y  G+PLAL++LG FL  RS  EW S LE+L   P  EI D+L+ISFDGL +
Sbjct: 376  QLCDRALNYTKGIPLALKILGRFLYNRSKKEWESELEKLRRIPNKEIQDVLRISFDGLDD 435

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             +K IF DIACFFKG D+DYV   L+ C F P IGIR LI+K L+T+  N L MHDL+QE
Sbjct: 436  NQKDIFFDIACFFKGQDKDYVIKLLKSCDFFPEIGIRNLIDKSLVTISYNKLCMHDLIQE 495

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G +IV+++S ++ GKRSRLW  ++V  +LT +TGTE VEG+VL N     E++   S  
Sbjct: 496  MGWEIVRQESMKDPGKRSRLWVNDDVIDMLTTNTGTEAVEGMVL-NLSTLKELHF--SVN 552

Query: 361  AFSKMTNLRLLKI------------------------CNLQLPNGLEYLSNRLRLLGWRG 396
             F+KM  LR+L+                         C   L    ++LSN LR L W G
Sbjct: 553  VFTKMNKLRVLRFYDAQIWGSSWIWRRNDRYKSPYTECKFHLSGDFKFLSNHLRSLYWDG 612

Query: 397  YPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPN 456
            YPLK LPSN   +K +E+ MC+S++ +LW+G K   KLK + LSHS++LI+ PDF+GAP 
Sbjct: 613  YPLKSLPSNFHPEKLLELKMCFSQLEQLWEGNKSFQKLKFIELSHSQHLIKAPDFSGAPK 672

Query: 457  LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
            L ++ILEGCT L ++HPS+    KLI LN++ C                  NLKS  ++I
Sbjct: 673  LRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCK-----------------NLKSFLSSI 715

Query: 517  SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
              L+ L  L +SG  K ++ PE+   M++LSEL L+GTAI+GLPLSIE L+GL L NL+ 
Sbjct: 716  H-LESLQILTLSGCSKLKKLPEVQGAMDNLSELSLKGTAIKGLPLSIEYLNGLALFNLEE 774

Query: 577  CRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIEL 636
            C+SLE LP  +  LK L++L LS C +LKK PEI  +M+ L ELFLD T ++E+PSSIE 
Sbjct: 775  CKSLESLPGCIFKLKSLKTLILSNCLRLKKLPEIQENMESLKELFLDDTGLRELPSSIEH 834

Query: 637  LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
            L  L LL L +CK L  LP SI  L SL+TL LSGC +L+ +P+ +G ++ L +L  +G+
Sbjct: 835  LNGLVLLKLKNCKRLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLLKLKANGS 894

Query: 697  A---VPHSTSWYSYIPI--------------NL---MRKSV--ALKLPSLSGLCSLRKLN 734
                VP S +  + + +              NL   +R S    L+L SL+ L SL+KLN
Sbjct: 895  GIQEVPSSITLLTRLQVLSLAGCKGGGSKSRNLALSLRASPTDGLRLSSLTVLHSLKKLN 954

Query: 735  LTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ 794
            L+D NL+EGALPSD+ +L  L+ L LS+N+F+++PTS++ L  L  + +E CK LQSLP+
Sbjct: 955  LSDRNLLEGALPSDLSSLSWLECLDLSRNNFITVPTSLSRLPHLRRLIVEHCKNLQSLPE 1014

Query: 795  LPPNIRQVRVNGCASLVTL---LDALKLCKSDSTMIACLDSLKLLGN-KSLAFSMLREYL 850
            LP +I+++  N C SL T      A  L K         +  +L+GN +S     + + +
Sbjct: 1015 LPSSIKELLANDCTSLETFSYPSSAYPLRKFGDFNFEFSNCFRLVGNEQSDTVEAILQEI 1074

Query: 851  EAVSNTRQHLS--------------VVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKL 896
              V++ ++ ++               VVPGS IPEWF +Q+EG SITV  P   YN    
Sbjct: 1075 RLVASIQKSMAPSEHSARYGESRYDAVVPGSRIPEWFTHQSEGDSITVELPPGCYNTNS- 1133

Query: 897  VGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLS 956
            +G A C VFH  K S G    G      +N     G + +        + +DH+W  Y  
Sbjct: 1134 IGLAACAVFHP-KFSMGK--IGRSAYFSVN---ESGGFSLDNTTSMHFSKADHIWFGY-R 1186

Query: 957  RQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVY 1002
              +  D+R            +H+ V+F      G  VK CG+  VY
Sbjct: 1187 LISGVDLR------------DHLKVAFATSKVPGEVVKKCGVRLVY 1220


>gi|359486071|ref|XP_002272667.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1261

 Score =  691 bits (1782), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/1061 (41%), Positives = 615/1061 (57%), Gaps = 100/1061 (9%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M S  + +  L+  GS DVRM+GI GM G+GKTTIA  VY  I   FE   FL NVRE S
Sbjct: 198  MASHIQNMVSLLRIGSDDVRMVGIWGMAGIGKTTIAEAVYQKIRTRFEGCCFLSNVREKS 257

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
             K     +Q +LLSQ+ +  + +   +  GI+++   L   +VL+V+DDV   +QL+ LA
Sbjct: 258  QKNDPAVIQMELLSQIFEEGNLNTGVLSGGINVIEKTLHSMRVLIVLDDVDCPQQLEVLA 317

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            GN  WF  GSRIIIT+R++HLL      E+Y    LN DEA +LF   AFK   P+ + V
Sbjct: 318  GNHNWFSPGSRIIITTREKHLLDEKV--EIYVAKELNKDEARKLFYQHAFKYKPPVGDFV 375

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            QL  R + Y  G+PLAL++LG FL  RS  EW S LE+L   P  EI D+L+ISFDGL +
Sbjct: 376  QLCDRALNYTKGIPLALKILGRFLYNRSKKEWESELEKLRRIPNKEIQDVLRISFDGLDD 435

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             +K IFLDIACFFKG D+DYV   L+ C F P I IR LI+K L+T+  N L MHDL+QE
Sbjct: 436  NQKDIFLDIACFFKGQDKDYVIKLLKSCDFFPEIEIRNLIDKSLVTISYNKLCMHDLIQE 495

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G +IV+++S ++ GKRSRLW  ++V  +LT +TGTE VEG+VL N     E++   S  
Sbjct: 496  MGWEIVRQESIKDPGKRSRLWVNDDVIDMLTTNTGTEAVEGMVL-NLSTLKELHF--SVN 552

Query: 361  AFSKMTNLRLLKI------------------------CNLQLPNGLEYLSNRLRLLGWRG 396
             F+KM  LR+L+                         C   L    ++LSN LR L W G
Sbjct: 553  VFTKMNKLRVLRFYDAQIWGSSWIGRHNDRYKSPYTECKFHLSGDFKFLSNHLRSLHWDG 612

Query: 397  YPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPN 456
            YPLK LPSN   +K +E+ MC+S++ +LW+G K   KLK + LSHS++LI+ PDF+GAP 
Sbjct: 613  YPLKSLPSNFHPEKLLELKMCFSQLEQLWEGNKSFQKLKFIELSHSQHLIKTPDFSGAPK 672

Query: 457  LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
            L ++ILEGCT L ++HPS+    KLI LN++ C                  NLKS  ++I
Sbjct: 673  LRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCK-----------------NLKSFSSSI 715

Query: 517  SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
              L+ L T+ +SG  K ++FPE+   M++L EL L+GTAI+GLPLSIE L+GL LLNL+ 
Sbjct: 716  H-LESLQTITLSGCSKLKKFPEVQGAMDNLPELSLKGTAIKGLPLSIEYLNGLSLLNLEE 774

Query: 577  CRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIEL 636
            C+SLE LP  +  LK L++L LS CS+LKK PEI  +M+ L +LFLD T ++E+PSSIE 
Sbjct: 775  CKSLESLPGCIFKLKSLKTLILSNCSRLKKLPEIQENMESLKKLFLDDTGLRELPSSIEH 834

Query: 637  LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
            L  L LL L +CK L  LP SI  L SL+TL LSGC +L+ +P+ +G ++ L +L  +GT
Sbjct: 835  LNGLVLLKLKNCKKLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLVKLKANGT 894

Query: 697  A---VPHSTSWYSYIPI---------NLMRKSVALKLPS----------LSGLCSLRKLN 734
                VP S +  + + +             +++AL L S          L  L SLRKLN
Sbjct: 895  GIQEVPTSITLLTKLEVLSLAGCKGGESKSRNLALCLRSSPTKGLRPSFLPVLYSLRKLN 954

Query: 735  LTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ 794
            L+ CNL+EGALPSD+ +L  L+ L LS+NSF+++P +++ L +L  + LE CK L+SLP+
Sbjct: 955  LSGCNLLEGALPSDLSSLSWLECLDLSRNSFITVP-NLSRLPRLKRLILEHCKSLRSLPE 1013

Query: 795  LPPNIRQVRVNGCASLVTLLD---ALKLCKSDSTMIACLDSLKLLGNKSL--AFSMLR-- 847
            LP NI ++  N C SL T  +   A     S        +  +L+ N+      ++LR  
Sbjct: 1014 LPSNIEKLLANDCTSLETFSNPSSAYAWRNSRHLNFQFYNCFRLVENEQSDNVEAILRGI 1073

Query: 848  EYLEAVSN------TRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAI 901
              + ++SN        +    VVPGS IPEWF  Q+ G S+TV  P + +   +L+G A+
Sbjct: 1074 RLVASISNFVAPHYELKWYDAVVPGSSIPEWFTDQSLGCSVTVELPPH-WCTTRLMGLAV 1132

Query: 902  CCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCY 961
            C VFH    + G   FG      +N   G  ++       F +A  DH+W  Y       
Sbjct: 1133 CFVFH---PNIGMGKFGRSEYFSMNESGGFSLHNTA-STHFSKA--DHIWFGY------- 1179

Query: 962  DIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVY 1002
                PL   +     +H+ VSF      G  VK CG   V+
Sbjct: 1180 ---RPLYGEVFSPSIDHLKVSFAGSNRAGEVVKKCGARLVF 1217


>gi|147770134|emb|CAN76615.1| hypothetical protein VITISV_040107 [Vitis vinifera]
          Length = 1414

 Score =  681 bits (1758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/1066 (41%), Positives = 602/1066 (56%), Gaps = 134/1066 (12%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MDS  Z +  L+  GS DVRM+GI GM G+GKTTIA  VY  I  +FE          + 
Sbjct: 198  MDSHIZNMVSLLCIGSDDVRMVGIWGMAGIGKTTIAEAVYQKICTQFE----------VF 247

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
             +G L               +  I+N   GI+ +   L   +VL+V+DDV   +QL+ LA
Sbjct: 248  WEGNL---------------NTRIFN--RGINAIKKXLHSMRVLIVLDDVDRPQQLEVLA 290

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            GN  WFG GSRIIIT+R++HLL      E+Y+   LN DEA  L    AFK   P    V
Sbjct: 291  GNHNWFGPGSRIIITTREKHLLDEKV--EIYEXKELNKDEARXLXYQHAFKYKPPAGXFV 348

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            QL  R + Y  G+PLAL++LG FL  RS  EW S LE+L   P  EI D+L+ISFDGL +
Sbjct: 349  QLCDRALNYTKGIPLALKILGRFLYNRSKKEWESELEKLRRIPNKEIQDVLRISFDGLDD 408

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             +K IF DIACFFKG D+DYV   L+ C F P IGIR LI+K L+T+  N L MHDL+QE
Sbjct: 409  NQKDIFXDIACFFKGQDKDYVIKLLKSCDFFPEIGIRNLIDKSLVTISYNKLCMHDLIQE 468

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G +IV+++S ++ GK SRLW  ++V  +LT +TGTE VEG+VL N     E++   S  
Sbjct: 469  MGWEIVRQESXKDPGKXSRLWVNDDVIDMLTTNTGTEAVEGMVL-NLSTLKELHF--SVN 525

Query: 361  AFSKMTNLRLLKI------------------------CNLQLPNGLEYLSNRLRLLGWRG 396
             F+KM  LR+ +                         C   L    ++LSN LR L W G
Sbjct: 526  VFTKMNKLRVXRFYDAQIWGSSWIWRRNDRYKSPYTECKFHLSGDFKFLSNHLRSLYWDG 585

Query: 397  YPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPN 456
            YPLK LPSN   +K +E+ MC+S++ +LW+G K   KLK + LSHS++LI+ PDF+GAP 
Sbjct: 586  YPLKSLPSNFHPEKLLELKMCFSQLEQLWEGNKSFQKLKFIELSHSQHLIKXPDFSGAPK 645

Query: 457  LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
            L ++ILEGCT L ++HPS+    KLI LN++ C                  NLKS  ++I
Sbjct: 646  LRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCK-----------------NLKSFLSSI 688

Query: 517  SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
              L+ L  L +SG  K ++ PE+   M++LSEL L+GTAI+GLPLSIE L+GL L NL+ 
Sbjct: 689  H-LESLQILTLSGCSKLKKXPEVQGAMDNLSELSLKGTAIKGLPLSIEYLNGLALFNLEE 747

Query: 577  CRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIEL 636
            C+SLE LP     LK L++L LS C +LKK PEI  +M+ L ELFLD T ++E+PSSIE 
Sbjct: 748  CKSLESLPGCXFKLKSLKTLILSNCLRLKKLPEIQENMESLKELFLDDTGLRELPSSIEH 807

Query: 637  LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
            L  L LL L +CK L  LP SI  L SL+TL LSGC +L+ +P+ +G ++ L +L  +G+
Sbjct: 808  LNGLVLLKLKNCKRLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLLKLKANGS 867

Query: 697  A---VPHSTSWYSYIPI--------------NL---MRKSV--ALKLPSLSGLCSLRKLN 734
                VP S +  + + +              NL   +R S    L+L SL+ L SL+KLN
Sbjct: 868  GIQEVPSSITLLTRLQVLSLAGCKGGGSKSRNLALSLRASPTDGLRLSSLTVLHSLKKLN 927

Query: 735  LTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ 794
            L+D NL+EGALPSD+ +L  L+ L LS+N+F+++PTS++ L  L  + +E CK LQSLP+
Sbjct: 928  LSDRNLLEGALPSDLSSLSWLECLDLSRNNFITVPTSLSRLPHLRRLIVEHCKNLQSLPE 987

Query: 795  LPPNIRQVRVNGCASLVTL---LDALKLCKSDSTMIACLDSLKLLGN-KSLAFSMLREYL 850
            LP +I+++  N C SL T      A  L K         +  +L+GN +S     + + +
Sbjct: 988  LPSSIKELLANDCTSLETFSYPSSAYPLRKFGDFNFEFSNCFRLVGNEQSDTVEAILQEI 1047

Query: 851  EAVSNTRQHLS--------------VVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKL 896
              V++ ++ ++               VVPGS IPEWF +Q+EG SITV  P   YN    
Sbjct: 1048 RLVASIQKSMAPSEHSARYGESRYDAVVPGSRIPEWFTHQSEGDSITVELPPGCYNTNS- 1106

Query: 897  VGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLS 956
            +G A C VFH  K S G    G      +N     G + +        + +DH+W  Y  
Sbjct: 1107 IGLAACAVFHP-KFSMGK--IGRSAYFSVN---ESGGFSLDNTTSMHFSKADHIWFGY-- 1158

Query: 957  RQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVY 1002
                   RL    +L     +H+ V+F      G  VK CG+  VY
Sbjct: 1159 -------RLISGVDLR----DHLKVAFATSKVPGEVVKKCGVRLVY 1193



 Score = 44.3 bits (103), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 38/55 (69%)

Query: 587  VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLE 641
            +  L  L++L LSGC++LKK P+ + S++ L +L  +G+  +E  +SI LLTKL+
Sbjct: 1256 ICKLTALQTLTLSGCTELKKLPDEMESLQCLVKLKANGSGRQEASTSITLLTKLQ 1310


>gi|225448053|ref|XP_002273151.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1468

 Score =  674 bits (1739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/1141 (39%), Positives = 632/1141 (55%), Gaps = 146/1141 (12%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MDS  + +  L+  GS DV+M+GI GM G+GK+TIA+VVY  I  +FE   FL NVRE S
Sbjct: 198  MDSHIQNMVSLLCIGSDDVQMVGIWGMAGIGKSTIAKVVYQKIRTQFEGYCFLSNVREKS 257

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
             K     +Q +LLSQ+    + +      GI+ + + L   KVL+V+DDV   +QL+ LA
Sbjct: 258  LKNDPADMQMELLSQIFWEGNLNTRIFNRGINAIKNTLHSMKVLVVLDDVDCPQQLEVLA 317

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            GN  WFG GS+IIIT+R+++LL      E+Y+   LN  EA  LF   AFK   P ++ V
Sbjct: 318  GNHNWFGLGSQIIITTREKNLLDEK--TEIYEVKELNNSEAHMLFCQHAFKYKPPTEDFV 375

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            QL    + Y  G+PLAL++LG  L  RS  EW S LE+L+  P   I D+L+ISFDGL  
Sbjct: 376  QLCDCALNYTKGIPLALKILGCSLYNRSKKEWESELEKLKRIPNKAIQDVLRISFDGLDN 435

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             +K IFLDIACFFKG D+DY T   + C F P IGIR LI+K L+T+  N L MHDL+QE
Sbjct: 436  NQKDIFLDIACFFKGQDKDYTTKIQKSCDFFPEIGIRNLIDKSLVTISYNKLCMHDLIQE 495

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G +IV+++S ++ GKRSRLW  E+V H+LT + GTE VEGIVLD      E++   S  
Sbjct: 496  MGWEIVRQESIKDPGKRSRLWVTEDVIHMLTTNIGTEAVEGIVLD-LSALKELHF--SVD 552

Query: 361  AFSKMTNLRLLKICNLQ---------------------------LPNGLEYLSNRLRLLG 393
             F+KM  LR+L+ CN Q                           L    ++LSN L+ L 
Sbjct: 553  VFTKMNRLRVLRFCNAQICEIWDYAWKRGNYDSCKNQYPKCKLHLYGDFKFLSNNLKSLH 612

Query: 394  WRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTG 453
            W GYP K LPS    +K +E+ M +SR+ +LW+G K   KLK + LSHS++LI+ PDF+G
Sbjct: 613  WDGYPSKSLPSTFHPEKLVELKMSFSRLEQLWEGNKSFQKLKFIKLSHSQHLIKTPDFSG 672

Query: 454  APNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNL---- 509
            APNL ++IL GCT L ++HPS+    KLI L+++ C +L +    I M+SL+ LNL    
Sbjct: 673  APNLRRIILVGCTSLVKVHPSIGALKKLIFLDLEGCKNLKSFSSSIHMESLQILNLAGCS 732

Query: 510  -------------------------------------------------KSLPTTISGLK 520
                                                             +SLP+ I  LK
Sbjct: 733  KLKKFPEVQGAMYNLPELSLKGTAIKGLPLSIEYLNGLALLNLGECKSLESLPSCIFKLK 792

Query: 521  CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL 580
             L TL +S  L+ ++ PEI E+ME L EL L+ T +R LP SIE L+ LVLL +KNC+ L
Sbjct: 793  SLKTLILSNCLRLKKLPEIRENMESLKELFLDDTGLRELPSSIEHLNELVLLQMKNCKKL 852

Query: 581  EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
              LP ++  LK L++L +S C +LKK PEI  +M+ L ELFLD T ++E+PSSIE L  L
Sbjct: 853  ASLPESIFKLKSLKTLTISNCLRLKKLPEIRENMESLKELFLDDTGLRELPSSIEHLNGL 912

Query: 641  ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA--- 697
             LL L +CK L  LP SI  L SL+TL LSGC +L+ +P+ +G ++ L +L+ +G+    
Sbjct: 913  VLLKLKNCKKLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLVKLESNGSGIQE 972

Query: 698  VPHSTSWYSYIPI--------------NL---MRKSV--ALKLPSLSGLCSLRKLNLTDC 738
            VP S +  + + +              NL   +R S     +L SL+ L SL++LNL+DC
Sbjct: 973  VPTSITLLTNLQVLSLTGCKGGESKSRNLALSLRSSPTEGFRLSSLTALYSLKELNLSDC 1032

Query: 739  NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPN 798
            NL+EGALPSD+ +L  L+ L LS NSF+++P S++ L +L  + LE CK LQSLP+LP +
Sbjct: 1033 NLLEGALPSDLSSLSWLERLDLSINSFITVP-SLSRLPQLERLILEHCKSLQSLPELPSS 1091

Query: 799  IRQVRVNGCASL--VTLLDA----LKLCKSDSTMIACL--------DSLKLLGNKSLAFS 844
            I ++  N C SL  ++ L +     K C  +     C         D+L+ +      F+
Sbjct: 1092 IIELLANDCTSLENISYLSSGFVLRKFCDFNFEFCNCFRLMENEQSDTLEAILLAIRRFA 1151

Query: 845  MLREYLEAVS-------NTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLV 897
             + ++++ +         +R     VVPGS IPEWF  Q+ G S+TV  P + Y   +L+
Sbjct: 1152 SVTKFMDPMDYSSLRTFASRIPYDAVVPGSSIPEWFTDQSVGCSVTVELPPHWYT-TRLI 1210

Query: 898  GYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSR 957
            G A+C VFH    S+G   FG      +N  +G  I        F +A  +H+W  Y S 
Sbjct: 1211 GLAVCAVFHP-NISKGK--FGRSAYFSMNESVGFSIDNTA-SMHFSKA--EHIWFGYRSL 1264

Query: 958  QTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEELDQTTNQPS 1017
                  R            +H+ VSF   +  G  VK CG+  ++  ++    +  N P 
Sbjct: 1265 FGVVFSR----------SIDHLEVSFSESIRAGEVVKKCGVRLIFEQDLPFGREEMNHPQ 1314

Query: 1018 R 1018
            +
Sbjct: 1315 K 1315


>gi|359493273|ref|XP_002272034.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1233

 Score =  663 bits (1711), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/1062 (40%), Positives = 610/1062 (57%), Gaps = 139/1062 (13%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            + SR +++   +   S+DVRM+GICG+GG+GKTTIA+VVY+LIS +FE   FL N+RE+S
Sbjct: 194  VSSRLKEILLRVSIESNDVRMVGICGIGGVGKTTIAKVVYNLISSQFEGISFLANIREVS 253

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
               GL+ LQ+QLL  +L      I N+ +GI++L  RL  KKVL+++DDV D+ QL+SLA
Sbjct: 254  KNCGLLPLQKQLLGDILMGWSQRISNLDEGINVLMDRLHSKKVLIILDDVDDLNQLESLA 313

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            GN +WFG GSRI+IT+RD+HLL  HGV E+Y+   L  +EALQLF+  AFK   P ++ +
Sbjct: 314  GNVDWFGIGSRIVITTRDKHLLNVHGVSEIYEAKELEPEEALQLFSQYAFKRKSPDKDYM 373

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
             LS  ++ YA GLPLAL+VLGSFL  +++ EW S L +L+ E  +++ D+L+ISFDGL  
Sbjct: 374  NLSDNVVHYAKGLPLALKVLGSFLFSKTILEWESELHKLKKELNTKVQDVLRISFDGLDF 433

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             +K+IFLD+ACFFKG + D+V   L+GCGFH   GIRVL ++CLI + +N LWMHDL+Q+
Sbjct: 434  TQKEIFLDLACFFKGQEYDFVIKILDGCGFHAKSGIRVLSDRCLIDLLDNRLWMHDLIQQ 493

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G +IV+++ P++ GK SRLW  E +  VL ++TGTE +EGI LD Y  +   +   + +
Sbjct: 494  MGWEIVRQECPKDPGKWSRLWDYEHIYSVLKKNTGTETIEGIFLDMYRSKEIQF---TTE 550

Query: 361  AFSKMTNLRLLKICNLQ----------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK 410
            AF+KM  LRLLK+ N            L    E+ S  LR L W GYP   LPS    + 
Sbjct: 551  AFAKMNRLRLLKVFNFSGIGKEGYKEPLSVSFEFPSYELRYLYWHGYPFGSLPSKFHSEN 610

Query: 411  TIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYE 470
             IE+ MCYS + ELWKG + LD L  + LS+S++LI +P+F+  PNLE+L+LEGCT + E
Sbjct: 611  LIELNMCYSYMRELWKGNEVLDNLNTIELSNSQHLIHLPNFSSMPNLERLVLEGCTTISE 670

Query: 471  IHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGD 530
            +  S+     LI+L++++C                   LKSLP++I  LK L TL +S  
Sbjct: 671  LPFSIGYLTGLILLDLENCK-----------------RLKSLPSSICKLKSLETLILSAC 713

Query: 531  LKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
             K   FPEI+E+MEHL +L L+GTA++ L  SIE L+GLV LNL++C++L  LP ++ NL
Sbjct: 714  SKLESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPCSIGNL 773

Query: 591  KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKN 650
            K L +L +SGCSKL++ PE + S++ L +L  DGT +++ PSSI LL  LE+L+   CK 
Sbjct: 774  KSLETLIVSGCSKLQQLPENLGSLQCLVKLQADGTLVRQPPSSIVLLRNLEILSFGGCKG 833

Query: 651  LVRLPSS------IIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSW 704
            L     S      ++  KS  T+ L        +P +L  + SL ELDIS          
Sbjct: 834  LASNSWSSLFSFWLLPRKSSDTIGL-------QLP-SLSGLCSLRELDISDC-------- 877

Query: 705  YSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNS 764
                  NLM                            EGA+P DI NL SL+ L LS+N+
Sbjct: 878  ------NLM----------------------------EGAVPFDICNLSSLETLNLSRNN 903

Query: 765  FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDS 824
            F SLP  I+ LSKL  + L  CK L  +P+LP +I +V    C+SL T+L    +C +  
Sbjct: 904  FFSLPAGISKLSKLRFLSLNHCKSLLQIPELPSSIIEVNAQYCSSLNTILTPSSVCNNQP 963

Query: 825  -------TMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHL---------SVVVPGSE 868
                   T+  C + L      S   +++   ++ V+N  Q L         S+ +PGSE
Sbjct: 964  VCRWLVFTLPNCFN-LDAENPCSNDMAIISPRMQIVTNMLQKLQNFLPDFGFSIFLPGSE 1022

Query: 869  IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCH 928
            IP+W   QN GS +T+  P + + +   +G+A+CCVF   ++   N C     + QL C 
Sbjct: 1023 IPDWISNQNLGSEVTIELPPHWF-ESNFLGFAVCCVF-AFEDIAPNGC-----SSQLLCQ 1075

Query: 929  ----------IGHGIYGIGFR-DKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESN 977
                      IGH ++ I    +   +  S H+WL Y  R      RL +     P    
Sbjct: 1076 LQSDESHFRGIGHILHSIDCEGNSEDRLKSHHMWLAYKPRG-----RLRISYGDCPNRWR 1130

Query: 978  HVNVSFEPWLGQGL-------EVKMCGLHPVYMDEVEELDQT 1012
            H   SF      G         V+ CG+H +Y  + EE + T
Sbjct: 1131 HAKASF------GFISCCPSNMVRKCGIHLIYAQDHEERNST 1166


>gi|224127726|ref|XP_002329162.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870943|gb|EEF08074.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1203

 Score =  661 bits (1705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/1089 (40%), Positives = 617/1089 (56%), Gaps = 105/1089 (9%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +DSR   +  ++  G +DVR+IGICGMGG+GK+TIARVVYD I  EFE S FL NVRE  
Sbjct: 204  IDSRVRVVSDMLFGGQNDVRIIGICGMGGIGKSTIARVVYDKIRCEFEGSCFLANVREGF 263

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
             K G V LQ+QLLS++L+     IW+   GI  + +RLQ +KVL+++DDV ++KQL  LA
Sbjct: 264  EKHGAVPLQKQLLSEILREKSPKIWDPEKGIAEIKNRLQNRKVLVILDDVDNLKQLHFLA 323

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
             + +WF  GSRIIITSRD++LL TH VD +Y+   LN D+AL L + KAFK  QP++   
Sbjct: 324  VDWKWFLPGSRIIITSRDKNLLSTHAVDGIYEAEELNDDDALVLLSRKAFKKDQPIEGYW 383

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            +L   ++ +A GLPLA  VL S L GRS+D W S ++RL   P  +++ +L++SFDGL+E
Sbjct: 384  ELCKSVLGHARGLPLAARVLASSLCGRSMDFWESFIKRLNEIPNRDVMAVLKLSFDGLEE 443

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            LEKK+FLDIACFFKG ++D VT  L  CGFH   GI++L +K LI V N+TL MHDLLQ 
Sbjct: 444  LEKKLFLDIACFFKGMNKDQVTRILNQCGFHANYGIQILQDKSLICVSNDTLSMHDLLQA 503

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G+++V+++S  E G+RSRLW  ++V HVL ++TGTE +E I LD  + E+        K
Sbjct: 504  MGREVVRQESTAEPGRRSRLWASKDVFHVLGKNTGTEEIESIALDWANPEDVEGTMQKTK 563

Query: 361  -------AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
                    FSKM+ LRLL+I N    +G EYLSN LR L WR YP K+LPS+ Q +  +E
Sbjct: 564  RSAWNTGVFSKMSRLRLLRIRNACFDSGPEYLSNELRFLEWRNYPSKYLPSSFQPENLVE 623

Query: 414  IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
            +++CYS + +L  G K LD LKV+ LS+SE LI+ P+FTG PNLE+LIL+GC RL E+H 
Sbjct: 624  VHLCYSNLRQLRLGNKILDSLKVIDLSYSEYLIKTPNFTGIPNLERLILQGCRRLSEVHS 683

Query: 474  SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKF 533
            S+  HNKLI +N+ DC SL                  SLP+ ISGL  L  L +SG  K 
Sbjct: 684  SIGHHNKLIYVNLMDCESLT-----------------SLPSRISGLNLLEELHLSGCSKL 726

Query: 534  REFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCL 593
            +EFPEI  + + L +L L+ T+I  LP SI+ L GL+ L+LK+C+ L  LP +++ LK L
Sbjct: 727  KEFPEIEGNKKCLRKLCLDQTSIEELPPSIQYLVGLISLSLKDCKKLSCLPSSINGLKSL 786

Query: 594  RSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVR 653
            ++L LSGCS+L+  PE    ++ L+EL + GT+I+E P SI  L  L++L+   C    R
Sbjct: 787  KTLHLSGCSELENLPENFGQLECLNELDVSGTAIREPPVSIFSLKNLKILSFHGCAESSR 846

Query: 654  LPSSI-----IALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI 708
              ++I       L   K  N +          +      L   ++   AVP+   +    
Sbjct: 847  STTNIWQRLMFPLMPGKRANSTSLVLPSLSGLSSLTRLGLSNCNLGEGAVPNDIGY---- 902

Query: 709  PINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSL 768
                              L SLR+LNL+    +  +LP+ I  L  L+ L          
Sbjct: 903  ------------------LSSLRQLNLSRNKFV--SLPTSIDQLSGLQFL---------- 932

Query: 769  PTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIA 828
                          +EDCK LQSLP+LP N+ + RVNGC SL  +  + KLC+ +     
Sbjct: 933  -------------RMEDCKMLQSLPELPSNLEEFRVNGCTSLEKMQFSRKLCQLNYLRYL 979

Query: 829  CLDSLKLLGN---KSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVT 885
             ++  +L  +    ++  ++LR+  +   N  +  SV++PGSEIP WF +Q+EGSS++V 
Sbjct: 980  FINCWRLSESDCWNNMFPTLLRKCFQGPPNLIESFSVIIPGSEIPTWFSHQSEGSSVSVQ 1039

Query: 886  RPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQA 945
             P + +   + +GYA+C            N F S P        G+    I  R K  + 
Sbjct: 1040 TPPHSHENDEWLGYAVCASLGY--PDFPPNVFRS-PMQCFFNGDGNESESIYVRLKPCEI 1096

Query: 946  GSDHLWLLYL-SRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMD 1004
             SDHLW LY  SR   +D               HV   FE    Q   +K CG+  VY  
Sbjct: 1097 LSDHLWFLYFPSRFKRFD--------------RHVRFRFEDNCSQTKVIK-CGVRLVYQQ 1141

Query: 1005 EVEELDQTTNQPSRFTVYNLNEFDQHFVGSKMIVATTSKRSLTEYFGAEASGSGCCDDEE 1064
            +VEEL++ TN     T   ++E  Q   G     A   +   T   G EASGS    DE+
Sbjct: 1142 DVEELNRMTNLYENSTFEGVDECFQESGG-----ALVKRLGHTNDVG-EASGS-VSSDEQ 1194

Query: 1065 PQPKRFREL 1073
            P  K+ +++
Sbjct: 1195 PPTKKLKQI 1203


>gi|147789504|emb|CAN71924.1| hypothetical protein VITISV_006193 [Vitis vinifera]
          Length = 1297

 Score =  661 bits (1705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/1059 (39%), Positives = 623/1059 (58%), Gaps = 111/1059 (10%)

Query: 11   LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQR 70
            +MDS S+DVRM+GI G+GG+GKTTIA+V+Y+ IS +F  + F+ N +E S   GL+ LQ+
Sbjct: 233  MMDSISNDVRMVGIYGLGGIGKTTIAKVLYNRISAQFMITTFIANAKEDSKSQGLLHLQK 292

Query: 71   QLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGS 130
            QLL  +L    N I  V +GI M+  RL  KKVLLV+DDV D+ QL++LAG+  WFG GS
Sbjct: 293  QLLHDILPRRKNFISTVDEGIHMIKDRLCFKKVLLVLDDVDDLNQLEALAGDHNWFGPGS 352

Query: 131  RIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYA 190
            RII+T+RD+HLL+ H VD +Y+   L + E ++LF   AFK   P +E   +S  ++ Y 
Sbjct: 353  RIIVTTRDKHLLEVHEVDTLYEAKKLYHKEVVELFCWNAFKQNHPKEEYETVSNFVVHYV 412

Query: 191  GGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIA 250
             GLPL L+VLG FL G+++ +W S L +LE EP  EI  +L+ S+D L +  + IFLD+A
Sbjct: 413  NGLPLGLKVLGCFLYGKTIRQWESELHKLEWEPNQEIQCVLKRSYDEL-DCTQHIFLDVA 471

Query: 251  CFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQS 310
            CFF G D+D VT  LE C F+   G+RVL +KCLI++ +N +WMHDLLQ++GQ IV ++ 
Sbjct: 472  CFFNGEDKDSVTRILEACKFYAESGMRVLGDKCLISIVDNKIWMHDLLQQMGQHIVGQEF 531

Query: 311  PEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRL 370
            PEE GK SRLW  + V  VLT   GTE ++GI+L N      +++  + ++F+ M NL L
Sbjct: 532  PEEPGKWSRLWFPDVVSRVLTRKMGTEAIKGILL-NLSIPKPIHV--TTESFAMMKNLSL 588

Query: 371  LKI------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
            LKI              ++L    E+ S  LR L W+GYPL+ LPS+   +  +E+ MCY
Sbjct: 589  LKIYSDYEFASMREHSKVKLSKDFEFSSYELRYLYWQGYPLESLPSSFYAEDLVELDMCY 648

Query: 419  SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFT-GAPNLEKLILEGCTRLYEIHPSLLL 477
            S + +LW+    L+KL  + LS  ++LI +PD +  APNLEKL L+GC+ L ++HPS+  
Sbjct: 649  SSLKQLWESDMLLEKLNTIRLSCCQHLIEIPDISVSAPNLEKLTLDGCSSLVKVHPSIGK 708

Query: 478  HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
             +KLI+LN+K+C  L +    I M++LE LNL                D S   + ++FP
Sbjct: 709  LSKLILLNLKNCKKLRSFLSIINMEALEILNLS---------------DCS---ELKKFP 750

Query: 538  EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
            +I  +MEHL EL+L  TAI  LP S+E L+GLVLL+LK C++L+ LP +V  L+ L  L 
Sbjct: 751  DIQGNMEHLLELYLASTAIEELPSSVEHLTGLVLLDLKRCKNLKSLPTSVCKLESLEYLF 810

Query: 598  LSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSS 657
             SGCSKL+ FPE++  M++L EL LDGTSI+ +PSSI+ L  L LLNL +CKNLV LP  
Sbjct: 811  PSGCSKLENFPEMMEDMENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCKNLVSLPKG 870

Query: 658  IIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHS------------- 701
            +  L SL+TL +SGC +L N+P+ LG ++ L +    GTA+   P S             
Sbjct: 871  MCTLTSLETLIVSGCSQLNNLPKNLGSLQHLAQPHADGTAITQPPDSIVLLRNLKVLIYP 930

Query: 702  -------TSWYSYIPINLMRKS----VALKLPS-LSGLCSLRKLNLTDCNLMEGALPSDI 749
                   TS  S     L+ ++    ++L+LPS  S   S   L+L+DC L+EGA+P+ I
Sbjct: 931  GCKRLAPTSLGSLFSFWLLHRNGSNGISLRLPSGFSCFMSFTNLDLSDCKLIEGAIPNSI 990

Query: 750  GNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCAS 809
             +L SLK+L LS+N F+S P  I+ L+ L ++ L   + L  +P+LPP++R +  + C +
Sbjct: 991  CSLISLKKLDLSRNDFLSTPAGISELTSLKDLRLGQYQSLTEIPKLPPSVRDIHPHNCTA 1050

Query: 810  LVTLLDALKL---------CKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHL 860
            L+    +L+           K    +++   S+  L    +   ++++  E ++      
Sbjct: 1051 LLPGPSSLRTNPVVIRGMKYKDFHIIVSSTASVSSLTTSPV---LMQKLFENIA-----F 1102

Query: 861  SVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSY 920
            S+V PGS IPEW  +Q+ GSSI +  P++ YN    +G+A+C V   L            
Sbjct: 1103 SIVFPGSGIPEWIWHQSVGSSIKIELPTDWYN-DDFLGFALCSVLEQLPE---------- 1151

Query: 921  PTHQLNCHIGHGIYGIGFRDKFG--------QAGSDHLWLLYLSRQTCYDIRLPLESNLE 972
               ++ CH+   ++  G    FG          GS+H+W   L  Q C  +RL  + N +
Sbjct: 1152 ---RIICHLNSDVFYYGDLKDFGHDFHWKGNHVGSEHVW---LGHQPCSQLRL-FQFN-D 1203

Query: 973  PFESNHVNVSFEPW----LGQGLEVKMCGLHPVYMDEVE 1007
            P + NH+ +SFE            VK CG+  +Y + +E
Sbjct: 1204 PNDWNHIEISFEAAHRFNSSASNVVKKCGVCLIYTEVLE 1242


>gi|359487015|ref|XP_003633506.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1610

 Score =  657 bits (1694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/1093 (39%), Positives = 624/1093 (57%), Gaps = 136/1093 (12%)

Query: 1    MDSRCEKLR----FLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV 56
            MD R E +      ++D  S++VRM+GI G GG+GKTT+A+V+Y+ I  +F  + F+ NV
Sbjct: 399  MDYRLEDMEEIFPQIIDPLSNNVRMVGIYGFGGIGKTTMAKVLYNRIGAQFMITSFIANV 458

Query: 57   REISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQL 116
            RE S   GL+ LQ+QLL  +L    N I NV +GI M+  RL  KKVLLV+DDV D+ QL
Sbjct: 459  REDSKSRGLLYLQKQLLHDILPKRKNFIRNVDEGIHMIKDRLCFKKVLLVLDDVDDLNQL 518

Query: 117  QSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
            ++LAG+  WFG GSRII+T+RD+HLL+ H +D +Y+   L++ EA++LF   AFK   P 
Sbjct: 519  EALAGDHNWFGPGSRIIVTTRDKHLLEVHEMDALYEAKKLDHKEAVELFCWNAFKQNHPK 578

Query: 177  QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
            ++   LS  ++ Y  GLPL L+VLG FL G+++ +W S L++L+ EP  EI  +L+ S+D
Sbjct: 579  EDYKTLSNSVVHYVNGLPLGLKVLGCFLYGKTICQWESELQKLQREPNQEIQRVLKRSYD 638

Query: 237  GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
             L   +++IFLD+ACFF G D+D+VT  L+ C F+   GI VL +KC IT+ +N +WMHD
Sbjct: 639  VLDYTQQQIFLDVACFFNGEDKDFVTRILDACNFYAKSGIGVLGDKCFITILDNKIWMHD 698

Query: 297  LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
            LLQ++G+ IV+++ P++ GK SRL   E V  VLT   GTE +EGI+L N      +++ 
Sbjct: 699  LLQQMGRDIVRQECPKDPGKWSRLCYPEVVNRVLTRKMGTEAIEGILL-NLSRLTRIHI- 756

Query: 357  ASAKAFSKMTNLRLLKIC------------NLQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
             + +AF  M NLRLLKI              ++L    E+ S  LR L W GYPL+ LP 
Sbjct: 757  -TTEAFVMMKNLRLLKIYWDLESAFMREDNKVKLSKDFEFPSYELRYLHWHGYPLESLPL 815

Query: 405  NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPNLEKLILE 463
                +  +E+ MCYS +  LW+G   L+KL  + +S S++LI +PD    APNLEKLIL+
Sbjct: 816  GFYAEDLVELDMCYSSLKRLWEGDLLLEKLNTIRVSCSQHLIEIPDIIVSAPNLEKLILD 875

Query: 464  GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLS 523
            GC+ L E+HPS+   NKLI+LN+K+C  LI  P  I MK+LE LN  S     SGLK   
Sbjct: 876  GCSSLLEVHPSIGKLNKLILLNLKNCKKLICFPSIIDMKALEILNFSS----CSGLK--- 928

Query: 524  TLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEIL 583
                       +FP I  +ME+L EL+L  TAI  LP SI  L+GLVLL+LK C++L+ L
Sbjct: 929  -----------KFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSL 977

Query: 584  PVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELL 643
            P ++  LK L +L LSGCSKL+ FPE+  +M +L EL LDGT I+ +P SIE L  L LL
Sbjct: 978  PTSICKLKSLENLSLSGCSKLESFPEVTENMDNLKELLLDGTPIEVLPLSIERLKGLILL 1037

Query: 644  NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTS 703
            NL  CKNLV L + +  L SL+TL +SGC +L N+P  LG ++ L +L   GTA+     
Sbjct: 1038 NLRKCKNLVSLSNGMCNLTSLETLIVSGCSQLNNLPRNLGSLQRLAQLHADGTAIAQPPD 1097

Query: 704  WYSYIPINLMRKSVALKLP--------SLSGLCSL------------------------- 730
                  I L+R    L  P        SL  L S                          
Sbjct: 1098 -----SIVLLRNLQVLIYPGCKILAPNSLGSLFSFWLLHGNSSNGIGLRLPSSFSSFRSL 1152

Query: 731  RKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQ 790
              L+++DC L+EGA+P+ I +L SLK+L LS+N+F+S+P  I+ L+ L ++ L  C+ L 
Sbjct: 1153 SNLDISDCKLIEGAIPNGICSLISLKKLDLSRNNFLSIPAGISELTNLKDLRLGQCQSLT 1212

Query: 791  SLPQLPPNIRQVRVNGCASL------VTLLDALKLC----------------KSDSTMIA 828
             +P+LPP++R +  + C +L      V+ L  L+                  +++  +  
Sbjct: 1213 GIPELPPSVRDIDAHNCTALLPGSSSVSTLQGLQFLFYNCSKPVEDQSSDDKRTELQIFP 1272

Query: 829  CLDSLKLLGNKSLAFS--MLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTR 886
             +         S+  S  M+++ LE ++      S+V PG+ IP+W  +QN GSSI +  
Sbjct: 1273 HIYVSSTASESSVTTSPVMMQKLLENIA-----FSIVFPGTGIPDWIWHQNVGSSIKIQL 1327

Query: 887  PSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQ-- 944
            P++ Y+    +G+A+C V   L               ++ CH+   ++  G    FG   
Sbjct: 1328 PTDWYS-DDFLGFALCSVLEHL-------------PERIICHLNSDVFDYGDLKDFGHDF 1373

Query: 945  ------AGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPW----LGQGLEVK 994
                   GS+H+WL Y   Q C  +RL  + N +P E NH+ +SFE            VK
Sbjct: 1374 HWTGNIVGSEHVWLGY---QPCSQLRL-FQFN-DPNEWNHIEISFEAAHRFNSSASNVVK 1428

Query: 995  MCGLHPVYMDEVE 1007
             CG+  +Y +++E
Sbjct: 1429 KCGVCLIYAEDLE 1441


>gi|359493267|ref|XP_002271591.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1417

 Score =  650 bits (1677), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/1077 (39%), Positives = 624/1077 (57%), Gaps = 114/1077 (10%)

Query: 22   IGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLAD 81
            +GI G+GG+GKTTIA+V ++ I+ +F  + F+ NVRE S   GL+ LQ+QLL        
Sbjct: 344  VGIYGLGGIGKTTIAKVSFNHIASDFMITSFIANVRECSKSKGLLHLQKQLLRDCSMRRV 403

Query: 82   NSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHL 141
             S+ NV +GI M+ +RL  KKVLLV+DDV ++ QL++LAG+  WFG GS IIIT+R++HL
Sbjct: 404  ESLSNVDEGITMIKARLCFKKVLLVLDDVDNLSQLEALAGDHNWFGPGSIIIITTREKHL 463

Query: 142  LKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLG 201
            L  H +D +Y+   L + EA++LF+  AF    P +    LS  ++RY  GLPL L+VLG
Sbjct: 464  L-GHEMDALYEAKKLGHKEAVELFSWHAFNQNHPKEYYETLSNSVVRYVDGLPLGLKVLG 522

Query: 202  SFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYV 261
             FL G++V EW S L +L+ EP  EI  +L+ S+D L   +K++FLD+ACFF G D+D+V
Sbjct: 523  RFLCGKTVGEWESELHKLKQEPNQEIQSVLKRSYDELDHTQKQLFLDVACFFNGEDKDFV 582

Query: 262  TNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLW 321
            T  L+ C F+   GIRVL +KCL+T+ +N +WMHDLLQ++G+ IV+++SPE+ GK SRL 
Sbjct: 583  TRILDACNFYAKGGIRVLTDKCLVTILDNKIWMHDLLQQMGRDIVRQESPEDPGKWSRLC 642

Query: 322  KEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKIC------- 374
                +  VLT   GTE ++G++  N     ++++  + K+F+ M NLRLLKI        
Sbjct: 643  YPGVISRVLTRKMGTEAIKGMLF-NVSIPKQIHI--TTKSFAMMKNLRLLKIYSHLKSTS 699

Query: 375  -----NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIK 429
                 +++L    E+ S  LR L W+GYPL+ LPS+   +  +E+ M YS + +LW+   
Sbjct: 700  AREDNSVKLSKDFEFPSCELRYLYWQGYPLESLPSSFDAEDLVELDMRYSNLKQLWENDM 759

Query: 430  HLDKLKVMILSHSENLIRMPDFT-GAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKD 488
             L+KL  + LS S++LI +PD +  APNLE LIL+GC+ L E+H S+   +KLI+L++K+
Sbjct: 760  LLEKLNTIRLSCSQHLIEIPDISISAPNLETLILDGCSSLLEVHTSIGKLSKLILLSLKN 819

Query: 489  CTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSE 548
            C  L + P  I M++L+ LNL    +  SGLK              +FP+I  +MEHL E
Sbjct: 820  CKKLSSFPSIINMEALKILNL----SGCSGLK--------------KFPDIQGNMEHLLE 861

Query: 549  LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
            L+L  TAI  LPLS   L+GLV+L+LK C++L+ LP ++  L+ L  L LSGCSKL+ FP
Sbjct: 862  LYLASTAIEELPLSFGHLTGLVILDLKRCKNLKSLPASICKLESLEYLFLSGCSKLENFP 921

Query: 609  EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
            E++  M++L EL LDGTSI+ +P SI+ L  L LLNL +CKNLV LP  +  L SL+TL 
Sbjct: 922  EMMEDMENLKELLLDGTSIEGLPLSIDRLKGLVLLNLRNCKNLVSLPKGMCKLTSLETLI 981

Query: 669  LSGCFKLENVPETLGQIESLEELDISGTAV---PHS--------------------TSWY 705
            +SGC  L N+P  LG ++ L +L   GTA+   P S                    TS  
Sbjct: 982  VSGCSLLNNLPRNLGSLQRLVQLHAEGTAITQPPDSIVLLRNLEVLVYPGRKILTPTSLG 1041

Query: 706  SYIPINLMRKS----VALKLPS-LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
            S     L+ ++    + L LPS      S   L+L+DC L+EGA+P+DI +L SLK+L L
Sbjct: 1042 SLFSFWLLHRNSSNGIGLHLPSGFPIFRSFTNLDLSDCKLIEGAIPNDICSLISLKKLAL 1101

Query: 761  SKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL------VTLL 814
            SKN+F+S+P  I+ L+ L ++ +  C+ L  +P+LPP+IR +  + C +L      V+ L
Sbjct: 1102 SKNNFLSIPAGISELTNLKDLLIGQCQSLIEIPELPPSIRDIDAHNCTALLPGSSSVSTL 1161

Query: 815  DALKLCKSDSTMIACLDSLKLLGNKSLAFS------------------MLREYLEAVSNT 856
              L+    + + +    S     N    F                   ++++ LE ++  
Sbjct: 1162 QGLQFLFYNCSKLFEDQSSDDKRNVLQRFPHNDASSSASVSSLTTSPVVMQKLLENIA-- 1219

Query: 857  RQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS---RG 913
                S+V PGSEIPEW  +Q+ GSSI +  P++ YN   L+G+++C V   L      R 
Sbjct: 1220 ---FSIVFPGSEIPEWIWHQHVGSSIKIELPTDWYN--DLLGFSLCSVLEHLPERIICRL 1274

Query: 914  NNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEP 973
            N+    Y   +     GH  +G G        G +H+WL Y   Q C  +RL  E N +P
Sbjct: 1275 NSDVFDYGDLK---DFGHDFHGKG-----NNVGPEHVWLGY---QPCSQLRL-FEFN-DP 1321

Query: 974  FESNHVNVSFEPW----LGQGLEVKMCGLHPVYMDEVEELDQTTNQPSRFTVYNLNE 1026
             + N + +SFE            VK CG+  +Y +++E +        +   YN+ E
Sbjct: 1322 NDWNLIEISFEAAHRFSSSASNVVKKCGVCLIYAEDLEGIHPQNKIQLKSRGYNVVE 1378


>gi|359493250|ref|XP_002268462.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1439

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/1059 (39%), Positives = 619/1059 (58%), Gaps = 120/1059 (11%)

Query: 11   LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQR 70
            +MDS S+DVRM+GI G+GG+GKTTIA+V+Y+ IS +F  + F+ N +E S   GL+ LQ+
Sbjct: 384  MMDSISNDVRMVGIYGLGGIGKTTIAKVLYNRISAQFMITTFIANAKEDSKSQGLLHLQK 443

Query: 71   QLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGS 130
            QLL  +L    N I  V +GI M+  RL  KKVLLV+DDV D+ QL++LAG+  WFG GS
Sbjct: 444  QLLHDILPRRKNFISTVDEGIHMIKDRLCFKKVLLVLDDVDDLNQLEALAGDHNWFGPGS 503

Query: 131  RIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYA 190
            RII+T+RD+HLL+ H VD +Y+   L + E ++LF   AFK   P +E   +S  ++ Y 
Sbjct: 504  RIIVTTRDKHLLEVHEVDTLYEAKKLYHKEVVELFCWNAFKQNHPKEEYETVSNFVVHYV 563

Query: 191  GGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIA 250
             GLPL L+VLG FL G+++ +W S L +LE EP  EI  +L+ S+D L +  + IFLD+A
Sbjct: 564  NGLPLGLKVLGCFLYGKTIRQWESELHKLEWEPNQEIQCVLKRSYDEL-DCTQHIFLDVA 622

Query: 251  CFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQS 310
            CFF G D+D VT  LE C F+   G+RVL +KCLI++ +N +WMHDLLQ++GQ IV ++ 
Sbjct: 623  CFFNGEDKDSVTRILEACKFYAESGMRVLGDKCLISIVDNKIWMHDLLQQMGQHIVGQEF 682

Query: 311  PEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRL 370
            PEE GK SRLW  +          GTE ++GI+L N      +++  + ++F+ M NL L
Sbjct: 683  PEEPGKWSRLWFPD---------VGTEAIKGILL-NLSIPKPIHV--TTESFAMMKNLSL 730

Query: 371  LKI------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
            LKI              ++L    E+ S  LR L W+GYPL+ LPS+   +  +E+ MCY
Sbjct: 731  LKIYSDYEFASMREHSKVKLSKDFEFSSYELRYLYWQGYPLESLPSSFYAEDLVELDMCY 790

Query: 419  SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFT-GAPNLEKLILEGCTRLYEIHPSLLL 477
            S + +LW+    L+KL  + LS  ++LI +PD +  APNLEKL L+GC+ L ++HPS+  
Sbjct: 791  SSLKQLWESDMLLEKLNTIRLSCCQHLIEIPDISVSAPNLEKLTLDGCSSLVKVHPSIGK 850

Query: 478  HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
             +KLI+LN+K+C  L +    I M++LE LNL                D S   + ++FP
Sbjct: 851  LSKLILLNLKNCKKLRSFLSIINMEALEILNLS---------------DCS---ELKKFP 892

Query: 538  EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
            +I  +MEHL EL+L  TAI  LP S+E L+GLVLL+LK C++L+ LP +V  L+ L  L 
Sbjct: 893  DIQGNMEHLLELYLASTAIEELPSSVEHLTGLVLLDLKRCKNLKSLPTSVCKLESLEYLF 952

Query: 598  LSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSS 657
             SGCSKL+ FPE++  M++L EL LDGTSI+ +PSSI+ L  L LLNL +CKNLV LP  
Sbjct: 953  PSGCSKLENFPEMMEDMENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCKNLVSLPKG 1012

Query: 658  IIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHS------------- 701
            +  L SL+TL +SGC +L N+P+ LG ++ L +    GTA+   P S             
Sbjct: 1013 MCTLTSLETLIVSGCSQLNNLPKNLGSLQHLAQPHADGTAITQPPDSIVLLRNLKVLIYP 1072

Query: 702  -------TSWYSYIPINLMRKS----VALKLPS-LSGLCSLRKLNLTDCNLMEGALPSDI 749
                   TS  S     L+ ++    ++L+LPS  S   S   L+L+DC L+EGA+P+ I
Sbjct: 1073 GCKRLAPTSLGSLFSFWLLHRNGSNGISLRLPSGFSCFMSFTNLDLSDCKLIEGAIPNSI 1132

Query: 750  GNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCAS 809
             +L SLK+L LS+N F+S P  I+ L+ L ++ L   + L  +P+LPP++R +  + C +
Sbjct: 1133 CSLISLKKLDLSRNDFLSTPAGISELTSLKDLRLGQYQSLTEIPKLPPSVRDIHPHNCTA 1192

Query: 810  LVTLLDALKL---------CKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHL 860
            L+    +L+           K    +++   S+  L    +   ++++  E ++      
Sbjct: 1193 LLPGPSSLRTNPVVIRGMKYKDFHIIVSSTASVSSLTTSPV---LMQKLFENIA-----F 1244

Query: 861  SVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSY 920
            S+V PGS IPEW  +Q+ GSSI +  P++ YN    +G+A+C V   L            
Sbjct: 1245 SIVFPGSGIPEWIWHQSVGSSIKIELPTDWYN-DDFLGFALCSVLEQL------------ 1291

Query: 921  PTHQLNCHIGHGIYGIGFRDKFG--------QAGSDHLWLLYLSRQTCYDIRLPLESNLE 972
               ++ CH+   ++  G    FG          GS+H+W   L  Q C  +RL  + N +
Sbjct: 1292 -PERIICHLNSDVFYYGDLKDFGHDFHWKGNHVGSEHVW---LGHQPCSQLRL-FQFN-D 1345

Query: 973  PFESNHVNVSFEPW----LGQGLEVKMCGLHPVYMDEVE 1007
            P + NH+ +SFE            VK CG+  +Y + +E
Sbjct: 1346 PNDWNHIEISFEAAHRFNSSASNVVKKCGVCLIYTEVLE 1384


>gi|359493269|ref|XP_003634556.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1299

 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/1078 (39%), Positives = 628/1078 (58%), Gaps = 106/1078 (9%)

Query: 1    MDSRCEKLR----FLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV 56
            MD R ++L      ++D  S+DVRM+GI G GG+GKTTIA+V+Y+ IS +F  + F+ NV
Sbjct: 199  MDYRLDQLEENFPQIIDLLSNDVRMVGIYGFGGIGKTTIAKVLYNQISAQFMIASFIANV 258

Query: 57   REISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQL 116
            RE S   GL+ LQ+QLL  +     N I NV +GI M+  RL  KKVLLV+DDV D+ QL
Sbjct: 259  REDSKSRGLLHLQKQLLQDIFPRRKNFISNVDEGIHMIKDRLCFKKVLLVLDDVDDLNQL 318

Query: 117  QSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
            ++LAG+  WFG GSRII+T+RD+HLL+ H +D +Y+   L++ EA++LF+  AFK   P 
Sbjct: 319  EALAGDHNWFGLGSRIIVTTRDKHLLEVHEMDALYEAKKLDHKEAVELFSWNAFKQNHPK 378

Query: 177  QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
            ++   ++  ++ Y  GLPL L+VLGSFL G+++ +W+S L +LE EP  EI  +L  S+D
Sbjct: 379  EDYEIVTNSVVHYVNGLPLGLKVLGSFLYGKTIQQWKSELHKLEREPNREIQCVLMRSYD 438

Query: 237  GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
             L   +K+IFLD+ACFF G D+D+VT  L+ C F    G+RVL +KCLI++ +N +WMHD
Sbjct: 439  ELDRTQKQIFLDVACFFNGEDKDFVTRILDACNFFAESGLRVLGDKCLISIIDNNIWMHD 498

Query: 297  LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
            LL+ +G+ IV ++ PE+ GK SRL   E V  VLT   GT+ ++GI+  N      +++ 
Sbjct: 499  LLRHMGRGIVGQKFPEDPGKWSRLCYPEVVSRVLTRKMGTKAIKGILF-NLSIPKPIHI- 556

Query: 357  ASAKAFSKMTNLRLLKIC------------NLQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
             + ++   M NLRLLKI              ++L    E+ S  LR L W+GYPL+ LPS
Sbjct: 557  -TTESLEMMKNLRLLKIYLDHESFSTREDNKVKLSKDFEFPSLELRYLYWQGYPLESLPS 615

Query: 405  NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFT-GAPNLEKLILE 463
            +  ++  +E+ M YS + +LW+    L+KL  + LS S++LI +PD +  APNLEKLIL+
Sbjct: 616  SFFVEDLVELDMRYSSLTQLWENDMLLEKLNTIRLSCSQHLIEIPDISICAPNLEKLILD 675

Query: 464  GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLS 523
            GC+ L  +HPS+   +KLI+LN+K+C  L + P  I MK+LE LN     +  SGLK   
Sbjct: 676  GCSSLLILHPSIGKLSKLILLNLKNCKKLSSFPSIIDMKALEILNF----SGCSGLK--- 728

Query: 524  TLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEIL 583
                       +FP+I  +M+HL ELHL  TAI  LP SI  ++ LVLL+LK C++L+ L
Sbjct: 729  -----------KFPDIRGNMDHLLELHLASTAIEELPSSIGHITRLVLLDLKRCKNLKSL 777

Query: 584  PVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELL 643
            P ++  LK L  L LSGCSKL+ FPE++  M++L EL LDGTSI+ +PSSI+ L  L LL
Sbjct: 778  PTSICRLKSLEYLFLSGCSKLENFPEVMVDMENLKELLLDGTSIEGLPSSIDRLKGLVLL 837

Query: 644  NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PH 700
            N+  C+NLV LP  +  L SL+TL +SGC +L N+P  LG ++ L +L   GTA+   P 
Sbjct: 838  NMRKCQNLVSLPKGMCKLTSLETLIVSGCSQLNNLPRNLGSLQRLAQLHADGTAITQPPE 897

Query: 701  S--------------------TSWYSYIPINLMRKS----VALKLPSLSGLCSLR-KLNL 735
            S                    TS  S     LM ++    V L+LPS          L+L
Sbjct: 898  SIVLLRNLQVLIYPGCKILAPTSLGSLFSFWLMHRNSSNGVGLRLPSSFFSFRSFTNLDL 957

Query: 736  TDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQL 795
            +D  L+EGA+P+DI +L SLK+L LS+N+F+S+P  I+ L+ L ++ L  C+ L  +P+L
Sbjct: 958  SDLKLIEGAIPNDICSLISLKKLDLSRNNFLSIPAGISQLTNLKDLRLGHCQSLIIIPEL 1017

Query: 796  PPNIRQVRVNGCASL------VTLLDALKL----CKS---DSTMIACLDSLKLLGNKSLA 842
            PP+IR V  + C +L      V  L  L+     C     D +     ++L+   +   +
Sbjct: 1018 PPSIRDVDAHNCTALFPTSSSVCTLQGLQFLFYNCSKPVEDQSSDQKRNALQRFPHNDAS 1077

Query: 843  FSMLREYLEAVSNTRQHL------SVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKL 896
             S     +      RQ L      S+V PGS IPEW  +QN GS I +  P++ YN    
Sbjct: 1078 SSASVSSVTTSPVVRQKLLENIAFSIVFPGSGIPEWIWHQNVGSFIKIELPTDWYN-DDF 1136

Query: 897  VGYAICCVFHVLKNS---RGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLL 953
            +G+ +C +   L      R N+    Y   +    IGH  +  G        GS+H+WL 
Sbjct: 1137 LGFVLCSILEHLPERIICRLNSDVFYYGDFK---DIGHDFHWKG-----DILGSEHVWLG 1188

Query: 954  YLSRQTCYDIRLPLESNLEPFESNHVNVSFEPW----LGQGLEVKMCGLHPVYMDEVE 1007
            Y   Q C  +RL  + N +P + N++ +SFE            VK CG+  +Y +++E
Sbjct: 1189 Y---QPCSQLRL-FQFN-DPNDWNYIEISFEAAHRFNSSASNVVKKCGVCLIYAEDLE 1241


>gi|359496026|ref|XP_002277166.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1250

 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/1110 (40%), Positives = 618/1110 (55%), Gaps = 150/1110 (13%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +DS   K+  L+  GS+DVR+IGI GMGG+GKTTIAR VY+ IS +FEA  FL NVRE S
Sbjct: 197  IDSHIRKMESLLSIGSNDVRIIGIWGMGGIGKTTIARSVYEQISKQFEACCFLSNVREDS 256

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
             K GLV LQ +LLS+LL+    SI  V  G+  + +RL+ K+VL+V+DD  +++QL+ LA
Sbjct: 257  EKRGLVKLQEELLSRLLEEGKISISTVDIGLAFIKTRLRFKRVLIVLDDAHNLQQLEYLA 316

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            G  +WFG GSRIIIT+RD HLL   GV+ VY+   LN ++A+ LF+  AF+   P ++ +
Sbjct: 317  GKHDWFGPGSRIIITTRDVHLLNKVGVNGVYEVAHLNNNDAVALFSRHAFEEDHPTEDYM 376

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            +LS   + YA GLPLAL+VLGSFL  +S  EW+S L++L+I P  +I  +L++SFDGL +
Sbjct: 377  ELSNYAVSYAKGLPLALKVLGSFLFSKSKLEWKSQLDKLQINPHMDIESVLRVSFDGLDD 436

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             E+ IFLD+ACFFKG D+DYV   L+ CGF+P IGIRVLI+K LITV +N LWMHDLLQE
Sbjct: 437  TEQDIFLDVACFFKGEDKDYVIKILDSCGFYPSIGIRVLIDKSLITVVHNKLWMHDLLQE 496

Query: 301  LGQQIVQRQSPE--------ELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            +G  IV++ S +        + GK SRLW +E+V  VLTE TGTE +EGI L+ Y  +  
Sbjct: 497  MGWDIVRKTSHKNPSKRRRLDPGKHSRLWLQEDVYDVLTEKTGTENIEGIFLNLYGLKEI 556

Query: 353  VYLCASAKAFSKMTNLRLLKICNLQLPNGLEYL-----------------SNRLRLLGWR 395
             Y   + +AF++M  LRLLK+ N       EY                  SN+LR L W 
Sbjct: 557  HY---TTEAFAEMKKLRLLKVYNSHNSGDFEYASRNENYKRPFSQDFEFPSNKLRYLYWH 613

Query: 396  GYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAP 455
             YPLK LPSN      +E+ +C   + ELWKG+KH++KL+ + LSHS+ L+R PDF+G P
Sbjct: 614  RYPLKSLPSNFHPKNLVELNLCCCYVEELWKGVKHMEKLECIDLSHSQYLVRTPDFSGIP 673

Query: 456  NLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTT 515
            NLE+LI EGCT L E+H SL + +KLI LN+KDC +L   P  I ++SL+ L L      
Sbjct: 674  NLERLIFEGCTDLREVHQSLGVLSKLIFLNLKDCKNLQCFPSSIELESLKVLIL------ 727

Query: 516  ISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLK 575
                        SG  K   FPEI+E+ME L EL L+GTAI+ LPLS+E L+GLVLLNL+
Sbjct: 728  ------------SGCSKLDNFPEILENMEGLRELFLDGTAIKELPLSVEHLNGLVLLNLR 775

Query: 576  NCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIE 635
            NC  L  LP ++ NLK L +L LSGCS+L+K PE + +++ L EL  DG+++ + PSSI 
Sbjct: 776  NCERLITLPSSICNLKSLSTLTLSGCSQLEKLPENLGNLECLVELVADGSAVIQPPSSIV 835

Query: 636  LLTKLELLNLSDCKN--LVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDI 693
            LL  L++L+   C      R  S   ++  L+ ++ S  F+L     +L  + SL++L++
Sbjct: 836  LLRNLKVLSFQGCNGSPSSRWNSRFWSMLCLRRISDSTGFRL----PSLSGLCSLKQLNL 891

Query: 694  SGTAVPHSTSWYSYIPINLMRKSVALKLPSLSG--LCSLRKLNLTDCNLMEGALPSDIGN 751
            S   +                      LP+  G  L SL  LNL   + +   LP+ I  
Sbjct: 892  SDCNIKEGA------------------LPNDLGGYLSSLEYLNLKGNDFV--TLPTGISK 931

Query: 752  LCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLV 811
            LC+LK LYL                         CKRLQ LP LPPNI ++    C SL 
Sbjct: 932  LCNLKALYLGC-----------------------CKRLQELPMLPPNINRINAQNCTSLE 968

Query: 812  TLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPE 871
            TL      C      +A  +S +    +         YL  VS   +  +  +PG+ IPE
Sbjct: 969  TLSGLSAPC-----WLAFTNSFRQNWGQ-------ETYLAEVSRIPK-FNTYLPGNGIPE 1015

Query: 872  WFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNC----------FGSYP 921
            WF  Q  G SI V  PS+ YN    +G+A+C VF +      N C               
Sbjct: 1016 WFRNQCMGDSIMVQLPSHWYN-DNFLGFAMCIVFAL---KEPNQCSRGAMLCELESSDLD 1071

Query: 922  THQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESN--LEPFESNHV 979
               L C + H ++  G  D  G   SDHLWL        Y    P++ +    P + +H+
Sbjct: 1072 PSNLGCFLDHIVWE-GHSDGDGFVESDHLWL-------GYHPNFPIKKDDMDWPNKLSHI 1123

Query: 980  NVSFEPWLGQGLEVKMCGLHPVYM----DEVEELDQTTNQPSRFTVYNLNEFDQHFVGSK 1035
              SF    G   EVK CG   VYM    D+  ++ + +  P + +V  L + D+      
Sbjct: 1124 KASFVI-AGIPHEVKWCGFRLVYMEDLNDDNSKITKYSPLPKKSSVV-LQDLDES----- 1176

Query: 1036 MIVATTSKRSLTEYF--GAEASGSGCCDDE 1063
               AT       EY+  G   SGS C +++
Sbjct: 1177 ---ATKDTIIHDEYYNSGGGPSGSPCSNED 1203


>gi|451798988|gb|AGF69192.1| TMV resistance protein N-like protein 6 [Vitis labrusca]
          Length = 1219

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/900 (42%), Positives = 527/900 (58%), Gaps = 117/900 (13%)

Query: 90   GIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDE 149
            GI+ +   L  +KVL+++DDV   +QL+ LAG   WFG GSRIIIT+RD HLL    VD 
Sbjct: 274  GINFMKDVLHSRKVLIILDDVDQRQQLEDLAGYNNWFGLGSRIIITTRDRHLLTCQEVDA 333

Query: 150  VYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSV 209
            +Y+   L+ DEAL+LF + AF+     ++  QL    + Y  GLPLAL+VLGS L  + +
Sbjct: 334  IYEVKELDNDEALKLFCLYAFRHRHGTEDFRQLCGHALDYTSGLPLALKVLGSSLYTKGI 393

Query: 210  DEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCG 269
             EW S L +L+  P  E+ ++L+ SF+GL + E+ IFLDIA F+KG+D+D+V + L+ CG
Sbjct: 394  HEWESELNKLKQFPNKEVQNVLKTSFEGLDDNEQNIFLDIAFFYKGHDKDFVGDILDSCG 453

Query: 270  FHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHV 329
            F   IGIR L +K LIT+  N L MHDLLQE+G +IV RQ  E  G+RSRL   E++ HV
Sbjct: 454  FFFGIGIRNLEDKSLITISENKLCMHDLLQEMGWEIV-RQKSEVPGERSRLRVHEDINHV 512

Query: 330  LTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLS--- 386
            LT +TGTE VEGI LD    +    L  S  AF+KM  LRLLKICN+Q+   L YLS   
Sbjct: 513  LTTNTGTEAVEGIFLDLSESKE---LNFSIDAFTKMKRLRLLKICNVQIDRSLGYLSKKE 569

Query: 387  -------------------------------NRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
                                           N LR L W GYPLK  PSN   +K +E+ 
Sbjct: 570  LIAYTHDVWTERNYLYTQNKLHLYEDSKFLSNNLRDLYWHGYPLKSFPSNFHPEKLVELN 629

Query: 416  MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
            MC+SR+ +LW+G K  +KLK + LSHS++L + PDF+G PNL +LIL+GCT L E+HPS+
Sbjct: 630  MCFSRLKQLWEGKKGFEKLKSIKLSHSQHLTKTPDFSGVPNLRRLILKGCTSLVEVHPSI 689

Query: 476  LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
                KLI LN++ C  L +    I M+SL+ L L                  SG  K ++
Sbjct: 690  GALKKLIFLNLEGCKKLKSFSSSIHMESLQILTL------------------SGCSKLKK 731

Query: 536  FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
            FPE+  +MEHL  L LEGTAI+GLPLSIE L+GL LLNLK C+SLE LP ++  LK L++
Sbjct: 732  FPEVQGNMEHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKSLESLPRSIFKLKSLKT 791

Query: 596  LKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
            L LS C++LKK PEI  +M+ L ELFLDG+ I E+PSSI  L  L  LNL +CK L  LP
Sbjct: 792  LILSNCTRLKKLPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLP 851

Query: 656  SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA---VPHSTSWYSYIPINL 712
             S   L SL TL L GC +L+ +P+ LG ++ L EL+  G+    VP S +    +  NL
Sbjct: 852  QSFCELTSLGTLTLCGCSELKELPDDLGSLQCLAELNADGSGIQEVPPSIT----LLTNL 907

Query: 713  MRKSVA-----------------------LKLPSLSGLCSLRKLNLTDCNLMEGALPSDI 749
             + S+A                       L+LPS SGL SLR L L  CNL EGALPSD+
Sbjct: 908  QKLSLAGCKGGDSKSRNMVFSFHSSPTEELRLPSFSGLYSLRVLILQRCNLSEGALPSDL 967

Query: 750  GNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCAS 809
            G++ SL+ L LS+NSF+++P S++ LS+L ++ LE CK LQSLP+LP ++  +  + C S
Sbjct: 968  GSIPSLERLDLSRNSFITIPASLSGLSRLRSLTLEYCKSLQSLPELPSSVESLNAHSCTS 1027

Query: 810  LVT-------------------LLDALKLCKSDSTMI--ACLDSLKLLGNKSLAFSMLRE 848
            L T                     +  +L ++  + I  A L+ ++L+       S + +
Sbjct: 1028 LETFSCSSGAYTSKKFGDLRFNFTNCFRLGENQGSDIVGAILEGIQLM-------SSIPK 1080

Query: 849  YL--EAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFH 906
            +L    +       + +VPGS IPEWF +Q+ G S+ +  P + YN  KL+G A C   +
Sbjct: 1081 FLVPWGIPTPHNEYNALVPGSRIPEWFRHQSVGCSVNIELPPHWYN-TKLMGLAFCAALN 1139


>gi|224116202|ref|XP_002331986.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832110|gb|EEE70587.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1098

 Score =  636 bits (1640), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 408/1014 (40%), Positives = 578/1014 (57%), Gaps = 136/1014 (13%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           +DSR E L   +     +   IGICGMGGLGKTT+ARVVYD I  +FE S FL NVRE+ 
Sbjct: 39  IDSRLEVLNGYIGEEVGEAIFIGICGMGGLGKTTVARVVYDRIRWQFEGSCFLANVREVF 98

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           + K G   LQ QLLS++L +   S+ +   GI+M+  R QRKK+L+V+DDV D KQL+SL
Sbjct: 99  AEKDGPRRLQEQLLSEIL-MERASVCDSSRGIEMIKRRSQRKKILVVLDDVDDHKQLESL 157

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           A   +WFG GSRIIITSRD+ +L  +GV  +Y+   LN D+AL LF+ KAF+  QP ++ 
Sbjct: 158 AAESKWFGPGSRIIITSRDKQVLTRNGVARIYEAEKLNDDDALMLFSQKAFENDQPAEDF 217

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           + LS +++ YA GLPLALEV+GSFL GRS+ EWR  + R+   P  EI+ +L +SFDGL 
Sbjct: 218 LDLSKQVVGYANGLPLALEVIGSFLHGRSIPEWRGAINRMNEIPDHEIIKVLLVSFDGLH 277

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           ELEKKIFLDIACF KG   D +T  L+G GFH  IGI VLIE+ LI+V  + +WMH+LLQ
Sbjct: 278 ELEKKIFLDIACFLKGFKIDRITRILDGRGFHASIGIPVLIERSLISVSRDQVWMHNLLQ 337

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           ++G++I++R+SPEE G+RSRLW  ++VC  L ++ G E +E I LD    +   +   + 
Sbjct: 338 KMGKEIIRRESPEEPGRRSRLWTYKDVCLALMDNIGKEKIEAIFLDMPGIKEAQW---NM 394

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           +AFSKM+ LRLLKI N+QL  G E LSN+LR L W  YP K LP++LQ+D+ +E++M  S
Sbjct: 395 EAFSKMSRLRLLKINNVQLSEGPEDLSNKLRFLEWHSYPSKSLPASLQVDELVELHMANS 454

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
            I +LW G K    LK++ LS+S NL + P+ TG PNLE LILEGCT L E+HPSL LH 
Sbjct: 455 SIEQLWYGCKSAINLKIINLSNSLNLSKTPNLTGIPNLESLILEGCTSLSEVHPSLALHK 514

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
           KL  +N+ +C S+  LP  + M+SL+                + TLD  G  K  +FP+I
Sbjct: 515 KLQHVNLVNCKSIRILPNNLEMESLK----------------VCTLD--GCSKLEKFPDI 556

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
           + +M  L  L L+ T+I  LP SI  L GL LL++ +C++LE +P ++  LK L+ L LS
Sbjct: 557 IGNMNCLMVLRLDETSITKLPSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLS 616

Query: 600 GCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSII 659
           GCS+LK  PE +  ++ L E  + GT I+++P+SI LL  LE+L++  CK +V +  S+ 
Sbjct: 617 GCSELKCIPENLGKVESLEEFDVSGTLIRQLPASIFLLKNLEVLSMDGCKRIV-MLPSLS 675

Query: 660 ALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVAL 719
           +L SL+ L L  C                   ++   A+P      S +    + ++  +
Sbjct: 676 SLCSLEVLGLRAC-------------------NLREGALPEDIGHLSSLRSLDLSQNKFV 716

Query: 720 KLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
            LP +++ L  L  L L DC +           L SL E+                 SK+
Sbjct: 717 SLPKAINQLSELEMLVLEDCTM-----------LASLPEVP----------------SKV 749

Query: 779 LNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLL-- 836
             + L  C+ L+ +P                     D +KL  S  +   CL+  +L   
Sbjct: 750 QTVNLNGCRSLKKIP---------------------DPIKLSSSKRSEFLCLNCWELYKH 788

Query: 837 -GNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKK 895
            G +S+  +ML  YL+ +SN R    + VPG+EIP WF ++++GSSI+V  PS       
Sbjct: 789 NGRESMGSTMLERYLQGLSNPRPGFGIAVPGNEIPGWFNHRSKGSSISVQVPSG------ 842

Query: 896 LVGYAICCVF-----------HVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQ 944
            +G+  C  F           H   N R N     YP+             I F    G 
Sbjct: 843 RMGFFACVAFNANDESPSLFCHFKANGREN-----YPSPMC----------INFE---GH 884

Query: 945 AGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGL 998
             SDH+WL YLS     +++   E   E F  +++ +SF  +  QG++V  CG+
Sbjct: 885 LFSDHIWLFYLSFDYLKELQ---EWQHESF--SNIELSFHSY-EQGVKVNNCGV 932


>gi|359495276|ref|XP_002276447.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1542

 Score =  632 bits (1629), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 430/1128 (38%), Positives = 629/1128 (55%), Gaps = 166/1128 (14%)

Query: 1    MDSRCEKLR----FLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV 56
            MD R E +      ++D  S++V M+GI G GG+GKTT+A+V+Y+ I  +F  + F+ NV
Sbjct: 402  MDYRLEDMEEIFPQIIDPLSNNVHMVGIYGFGGIGKTTMAKVLYNRIGAQFMITSFIANV 461

Query: 57   REISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQL 116
            RE S   GL+ LQ+QLL  +L    N I NV +GI M+  RL  KKVLLV+DDV D+ QL
Sbjct: 462  REDSKSRGLLYLQKQLLHDILPKRKNFIRNVDEGIHMIKDRLCFKKVLLVLDDVDDLNQL 521

Query: 117  QSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
            ++LAG+  WFG GSRII+T+RD+HLL+ H +D +Y+   L++ EA++LF   AFK   P 
Sbjct: 522  EALAGDHNWFGPGSRIIVTTRDKHLLEVHEIDALYEAKKLDHKEAVELFCWNAFKQNHPK 581

Query: 177  QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
            ++   LS  ++ Y  GLPL L+VLG FL G++V +W S L++L+ EP  EI  +L+ S+D
Sbjct: 582  EDYETLSNSVVHYVNGLPLGLKVLGCFLYGKTVCQWESELQKLQREPNQEIQRVLKRSYD 641

Query: 237  GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
             L   +++IFLD+ACFF G D+D+VT  L+ C F+   GI VL +KC IT+ +N +WMHD
Sbjct: 642  VLDYTQQQIFLDVACFFNGEDKDFVTRILDACNFYAESGIGVLGDKCFITILDNKIWMHD 701

Query: 297  LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
            LLQ++G+ IV+++ P++ GK SRL   E V  VLT   GTE +EGI+L N      +++ 
Sbjct: 702  LLQQMGRDIVRQECPKDPGKWSRLCYPEVVNRVLTRKMGTEAIEGILL-NLSRLMRIHI- 759

Query: 357  ASAKAFSKMTNLRLLKIC------------NLQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
             S +AF+ M NLRLLKI              ++L    E+ S  LR L W GYPL+ LP 
Sbjct: 760  -STEAFAMMKNLRLLKIYWDLEYAFMREDNKVKLSKDFEFPSYELRYLHWHGYPLESLPL 818

Query: 405  NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD--------FTGAPN 456
                +  +E+ MCYS +  LW+G   ++KL  + +S S++LI +PD        F G  N
Sbjct: 819  GFYAEDLVELDMCYSSLKRLWEGDLLVEKLNTIKVSFSQHLIEIPDMTYNTMGCFNGTRN 878

Query: 457  ---------------------------------LEKLILEGCTRLYEIHPSLLLHNKLII 483
                                             L + IL+GC+ L E+HPS+   NKLI+
Sbjct: 879  SSNSLFNQIPSQIPCAIARNSASALLRATTDCFLLRHILDGCSSLLEVHPSIGKLNKLIL 938

Query: 484  LNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHM 543
            LN+K+C  LI  P  I MK+LE LN     +  SGLK              +FP I  +M
Sbjct: 939  LNLKNCKKLICFPSIIDMKALEILNF----SGCSGLK--------------KFPNIQGNM 980

Query: 544  EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            E+L EL+L  TAI  LP SI  L+GLVLL+LK C++L+ L  ++  LK L +L LSGCSK
Sbjct: 981  ENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLSTSICKLKSLENLSLSGCSK 1040

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
            L+ FPE++ +M +L EL LDGT I+ +PSSIE L  L LLNL  CKNLV L + +  L S
Sbjct: 1041 LESFPEVMENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLVSLSNGMCNLTS 1100

Query: 664  LKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHS------------------- 701
            L+TL +SGC +L N+P  LG ++ L +L   GTA+   P S                   
Sbjct: 1101 LETLIVSGCLQLNNLPRNLGSLQRLAQLHADGTAITQPPDSIVLLRNLQVLIYPGCKILA 1160

Query: 702  -TSWYSYIPINLMR----KSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSL 755
             TS  S     L+       + L+LP S S   SL  L+++DC L+EGA+P+ I +L SL
Sbjct: 1161 PTSLGSLFSFWLLHGNSSNGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIPNGICSLISL 1220

Query: 756  KELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL----- 810
            K+L LS+N+F+S+P  I+ L+ L ++ L  C+ L  +P+LPP++R +  + C +L     
Sbjct: 1221 KKLDLSRNNFLSIPAGISELTNLKDLRLGQCQSLTGIPELPPSVRDIDAHNCTALLPGSS 1280

Query: 811  -VTLLDALKLC----------------KSDSTMIACLDSLKLLGNKSLAFS--MLREYLE 851
             V  L  L+                  +++  +   +       + S+  S  M+++ LE
Sbjct: 1281 SVNTLQGLQFLFYNCSKPVEDQSSDDKRTELQIFPHIYVSSTASDSSVTTSPVMMQKLLE 1340

Query: 852  AVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS 911
             ++      S+V PG+ IPEW  +QN GSSI +  P++ ++    +G+A+C V   L   
Sbjct: 1341 NIA-----FSIVFPGTGIPEWIWHQNVGSSIKIQLPTD-WHSDDFLGFALCSVLEHL--- 1391

Query: 912  RGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQ--------AGSDHLWLLYLSRQTCYDI 963
                        ++ CH+   ++  G    FG          GS+H+WL Y   Q C  +
Sbjct: 1392 ----------PERIICHLNSDVFNYGDLKDFGHDFHWTGNIVGSEHVWLGY---QPCSQL 1438

Query: 964  RLPLESNLEPFESNHVNVSFEPW----LGQGLEVKMCGLHPVYMDEVE 1007
            RL  + N +P E NH+ +SFE            VK CG+  +Y +++E
Sbjct: 1439 RL-FQFN-DPNEWNHIEISFEAAHRFNSSASNVVKKCGVCLIYAEDLE 1484


>gi|147828597|emb|CAN68630.1| hypothetical protein VITISV_003859 [Vitis vinifera]
          Length = 1500

 Score =  629 bits (1621), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 424/1076 (39%), Positives = 614/1076 (57%), Gaps = 127/1076 (11%)

Query: 1    MDSRCEKLR----FLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV 56
            MD R E +      ++D  S++V M+GI G GG+GKTT+A+V+Y+ I  +F  + F+ NV
Sbjct: 425  MDYRLEDMEEIFPQIIDPLSNNVHMVGIYGFGGIGKTTMAKVLYNRIGAQFMITSFIANV 484

Query: 57   REISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQL 116
            RE S   GL+ LQ+QLL  +L    N I NV +GI M+  RL  KKVLLV+DDV D+ QL
Sbjct: 485  REDSKSRGLLYLQKQLLHDILPKRKNFIRNVDEGIHMIKDRLCFKKVLLVLDDVDDLNQL 544

Query: 117  QSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
            ++LAG+  WFG GSRII+T+RD+HLL+ H  D +Y+   L++ EA++LF   AFK   P 
Sbjct: 545  EALAGDHNWFGPGSRIIVTTRDKHLLEVHEXDALYEAKKLDHKEAVELFCWNAFKQNHPK 604

Query: 177  QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
            ++   LS  ++ Y  GLPL L+VLG FL G++V +W S L++L+ EP  EI  +L+ S+D
Sbjct: 605  EDYETLSNSVVHYVNGLPLGLKVLGCFLYGKTVCQWESELQKLQREPNQEIQRVLKRSYD 664

Query: 237  GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
             L   +++IFLD+ACFF G D+D+VT FL+ C F+   GI VL +KC IT+ +N +WMHD
Sbjct: 665  VLDYTQQQIFLDVACFFNGEDKDFVTRFLDACNFYAESGIGVLGDKCFITILDNKIWMHD 724

Query: 297  LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
            LLQ++G+ IV+++ P++ GK SRL   E V  VLT            +    +E+     
Sbjct: 725  LLQQMGRDIVRQECPKDPGKWSRLCYPEVVNRVLTRKX---------VRTNANESTFMXK 775

Query: 357  ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
                AF++  N        ++L    E+ S  LR L W GYPL+ LP     +  +E+ M
Sbjct: 776  DLEXAFTREDN-------KVKLSKDFEFPSYELRYLHWHGYPLESLPXXFYAEDLVELDM 828

Query: 417  CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFT-GAPNLEKLILEGCTRLYEIHPSL 475
            CYS +  LW+G   L+KL  + +S S++LI +PD T  APNL+KLIL+GC+ L E+HPS+
Sbjct: 829  CYSSLKRLWEGDLLLEKLNTIRVSCSQHLIEIPDITVSAPNLQKLILDGCSSLLEVHPSI 888

Query: 476  LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
               NKLI+LN+K+C  LI  P  I MK+LE LN     +  SGLK              +
Sbjct: 889  GKLNKLILLNLKNCKKLICFPSIIDMKALEILNF----SGCSGLK--------------K 930

Query: 536  FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
            FP I  +ME+L EL+L  TAI  LP SI  L+GLVLL+LK C++L+ LP ++  LK L +
Sbjct: 931  FPNIQGNMENLFELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLEN 990

Query: 596  LKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
            L LSGCSKL  FPE+  +M  L EL LDGT I+ +PSSI+ L  L LLNL  CKNLV L 
Sbjct: 991  LSLSGCSKLGSFPEVTENMDKLKELLLDGTPIEVLPSSIDRLKGLVLLNLRKCKNLVSLS 1050

Query: 656  SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHS----------- 701
            + +  L SL+TL +SGC +L N+P  LG ++ L +L   GTA+   P S           
Sbjct: 1051 NGMCNLTSLETLVVSGCSQLNNLPRNLGSLQRLAQLHADGTAIAQPPDSIVLLRNLQVLI 1110

Query: 702  ---------TSWYSYIPINLMR----KSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPS 747
                     TS  S     L+       + L+LP S S   SL  L+L+DC L+EGA+P+
Sbjct: 1111 YPGCKILAPTSLGSLFSFWLLHGNSSNGIGLRLPSSFSSFRSLSNLDLSDCKLIEGAIPN 1170

Query: 748  DIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGC 807
             I +L SLK+L LS+N+F+S+P  I+ L+ L ++ L  C+ L  +P+LP ++R +  + C
Sbjct: 1171 GICSLISLKKLDLSQNNFLSIPAGISELTNLEDLRLGQCQSLTGIPELPLSLRDIDAHNC 1230

Query: 808  ASL------VTLLDALKL----CKS---DSTMIACLDSLKLL---------GNKSLAFS- 844
             +L      V+ L  L+     C     D +       L+L           + S+  S 
Sbjct: 1231 TALLPGSSSVSTLQGLQFLFYNCSKPVEDQSSDDKRTELQLFPHIYVSSTASDSSVTTSP 1290

Query: 845  -MLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICC 903
             M+++ LE ++      S+V PG+ IPEW  +QN GSSI +  P++ Y+    +G+A+C 
Sbjct: 1291 VMMQKLLENIA-----FSIVFPGTGIPEWIWHQNVGSSIKIQLPTDWYS-DDFLGFALCS 1344

Query: 904  VFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQ--------AGSDHLWLLYL 955
            V   L               ++ CH+   ++  G    FG          GS+H+WL Y 
Sbjct: 1345 VLEHL-------------PERIICHLNSDVFDYGDLKDFGHDFHWTGDIVGSEHVWLGY- 1390

Query: 956  SRQTCYDIRLPLESNLEPFESNHVNVSFEPW----LGQGLEVKMCGLHPVYMDEVE 1007
              Q C  +RL  + N +P E NH+ +SFE            VK CG+  +Y ++++
Sbjct: 1391 --QPCSQLRL-FQFN-DPNEWNHIEISFEAAHRFNSSASNVVKKCGVCLIYAEDLD 1442


>gi|359495221|ref|XP_002274238.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1181

 Score =  629 bits (1621), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 393/935 (42%), Positives = 563/935 (60%), Gaps = 69/935 (7%)

Query: 11   LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQR 70
            L+ + S +VRMIGI G+GG+GKTT+A++VY+   ++FE + FL +V    SK  L+ LQ 
Sbjct: 201  LISNDSDNVRMIGIHGIGGIGKTTLAKIVYNQNFYKFEGACFLSSV----SKRDLLQLQN 256

Query: 71   QLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGS 130
            +LL  L      S  N+++GI+M+  RL+ +KVL+++DD+ D  QL+ LA   +WFGSGS
Sbjct: 257  ELLKALTGPYFPSARNIYEGINMIKDRLRFRKVLVILDDIDDQAQLEFLAVRSKWFGSGS 316

Query: 131  RIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYA 190
            RII+T+RD+ LL+   V  +Y+   LN +EAL LF++ AF    P +   +LS  I+ + 
Sbjct: 317  RIIVTTRDKRLLQ---VFRLYEVKELNSEEALHLFSLYAFMMDGPQKGFEKLSRCIVDHC 373

Query: 191  GGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIA 250
             GLPLAL+VLGS L GR+  EW + L ++      +I  +L  SF GL    ++I LDIA
Sbjct: 374  EGLPLALKVLGSLLYGRTKPEWENELAKMRNLRSQKIHSVLLRSFHGLDRTNRRILLDIA 433

Query: 251  CFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQS 310
            CFFKG D  +V   LE C F    GIR+L EK LI+V N+ L MHDL+Q++G  IV+ + 
Sbjct: 434  CFFKGEDIKFVREILEACNFCAHPGIRILNEKALISVSNDKLLMHDLIQQMGWDIVREKY 493

Query: 311  PEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRL 370
            P+E GK SRLW  E++ HVLT +TGT+ +EGI LD      E++L  +  AF KM  LRL
Sbjct: 494  PDEPGKWSRLWDPEDIYHVLTTNTGTQAIEGIFLD-MSASKEIHL--TTDAFKKMKKLRL 550

Query: 371  LKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIG 422
            L++ +        + LP   ++ S+ LR L W G+ L+ LPSN   +K +E+ + +S I 
Sbjct: 551  LRVYHNLKNISDTIHLPQDFKFPSHELRYLHWDGWTLESLPSNFHGEKLVELSLKHSSIK 610

Query: 423  ELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLI 482
             LWK  K L KLKV+ LS+S++L+  P+ +GAP++++LIL+GCT L E+HPS+    +L 
Sbjct: 611  RLWKEHKCLGKLKVINLSNSQHLVECPNLSGAPHVKRLILDGCTSLLEVHPSVAKLKRLT 670

Query: 483  ILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEH 542
            ILNMK+C  L   P                  +I+GL+ L  L++SG  K  +FPEI  +
Sbjct: 671  ILNMKNCKMLHHFP------------------SITGLESLKVLNLSGCSKLDKFPEIQGY 712

Query: 543  MEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
            ME+LSEL+LEGTAI  LP S+  L  LV L++KNC++L+ILP  + +LK L +L  SGCS
Sbjct: 713  MEYLSELNLEGTAIVELPSSVVFLPQLVSLDMKNCKNLKILPSNICSLKSLETLVFSGCS 772

Query: 603  KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
             L+ FPEI+  M+ L +L LDGTSIKE+P SI  L  L+LL+L  CKNL  LP+SI +L+
Sbjct: 773  GLEMFPEIMEVMESLQKLLLDGTSIKELPPSIVHLKGLQLLSLRKCKNLRSLPNSICSLR 832

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH---------------------- 700
            SL+TL +SGC  L  +PE LG ++ L  L   GTA+                        
Sbjct: 833  SLETLIVSGCSNLNKLPEELGSLQYLMILQADGTAITQPPFSLVHLRNLKELSFRGCKGS 892

Query: 701  -STSWYSYIPINLMRK----SVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSL 755
             S SW S +   L+R+       L+LP LSGL SL+ L+L+ CNL +G++  ++G L  L
Sbjct: 893  TSNSWISSLVFRLLRRENSDGTGLQLPYLSGLYSLKYLDLSGCNLTDGSINDNLGRLRFL 952

Query: 756  KELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLD 815
            +EL LS+N+ V +P  +  LS L  + +  CK LQ + +LPP+I+ +    C SL  L  
Sbjct: 953  EELNLSRNNLVMVPEGVHRLSNLRVLSVNQCKSLQEISKLPPSIKSLDAGDCISLEFLSI 1012

Query: 816  ALKLCKSDSTMIACLD--SLKLLGNKSLAFSMLREYLEAVSNT---RQHLSVVVPGSEIP 870
                     +  +CL   S KL    +LA   +   LE +          S+V+PGS IP
Sbjct: 1013 PSPQSPQYLSSSSCLHPLSFKLSNCFALAQDNVATILEKLHQNFLPEIEYSIVLPGSTIP 1072

Query: 871  EWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
            EWF + + GSS T+  P N +N K  +G+A+C VF
Sbjct: 1073 EWFQHPSIGSSETIELPPNWHN-KDFLGFALCSVF 1106


>gi|147822714|emb|CAN68293.1| hypothetical protein VITISV_015601 [Vitis vinifera]
          Length = 1254

 Score =  626 bits (1615), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 392/935 (41%), Positives = 562/935 (60%), Gaps = 69/935 (7%)

Query: 11   LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQR 70
            L+ + S +VRMIGI G+GG+GKTT+A++VY+   ++FE + FL +V    SK  L+ LQ 
Sbjct: 214  LISNDSDNVRMIGIHGIGGIGKTTLAKIVYNQNFYKFEGACFLSSV----SKRDLLQLQN 269

Query: 71   QLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGS 130
            +LL  L      S  N+++GI+M+  RL+ +KVL+++DD+ D  QL+ LA   +WFGSGS
Sbjct: 270  ELLKALTGPYFPSARNIYEGINMIKDRLRFRKVLVILDDIDDQAQLEFLAVRSKWFGSGS 329

Query: 131  RIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYA 190
            RII+T+RD+ LL+   V  +Y+   LN +EAL LF++ AF    P +   +LS  I+ + 
Sbjct: 330  RIIVTTRDKRLLQ---VFRLYEVKELNSEEALHLFSLYAFMMDGPQKGFEKLSRCIVDHC 386

Query: 191  GGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIA 250
             GLPLAL+VLGS L GR+  EW + L ++      +I  +L  SF GL    ++I LDIA
Sbjct: 387  EGLPLALKVLGSLLYGRTKPEWENELAKMRNLRSQKIHSVLLRSFHGLDRTNRRILLDIA 446

Query: 251  CFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQS 310
            CFFKG D  +V   LE C F    GIR+L EK LI+V N+ L MHDL+Q++G  IV+ + 
Sbjct: 447  CFFKGEDIKFVREILEACNFCAHPGIRILNEKALISVSNDKLLMHDLIQQMGWDIVREKY 506

Query: 311  PEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRL 370
            P+E GK SRLW  E++ HVLT +TGT+ +EGI LD      E++L  +  AF KM  LRL
Sbjct: 507  PDEPGKWSRLWDPEDIYHVLTTNTGTQAIEGIFLD-MSASKEIHL--TTDAFKKMKKLRL 563

Query: 371  LKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIG 422
            L++ +        + LP   ++ S+ LR L W G+ L+ LPSN   +K +E+ + +S I 
Sbjct: 564  LRVYHNLKNISDTIHLPQDFKFPSHELRYLHWDGWTLESLPSNFHGEKLVELSLKHSSIK 623

Query: 423  ELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLI 482
             LWK  K L KLKV+ LS+S++L+  P+ +GAP++++LIL+GCT L E+HPS+    +L 
Sbjct: 624  RLWKEHKCLGKLKVINLSNSQHLVECPNLSGAPHVKRLILDGCTSLLEVHPSVAKLKRLT 683

Query: 483  ILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEH 542
            ILNMK+C  L   P                  +I+GL+ L  L++SG  K  +FPEI  +
Sbjct: 684  ILNMKNCKMLHHFP------------------SITGLESLKVLNLSGCSKLDKFPEIQGY 725

Query: 543  MEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
            ME+LSEL+LEGTAI  LP S+  L  LV L++KNC++L+ILP  + +LK L +L  SGCS
Sbjct: 726  MEYLSELNLEGTAIVELPSSVVFLPQLVSLDMKNCKNLKILPSNICSLKSLETLVFSGCS 785

Query: 603  KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
             L+ FPEI+  M+ L +L LDGTSIKE+P SI  L  L+LL+L  CKNL  LP+SI +L+
Sbjct: 786  GLEMFPEIMEVMESLQKLLLDGTSIKELPPSIVHLKGLQLLSLRKCKNLRSLPNSICSLR 845

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH---------------------- 700
            SL+TL +SGC  L  +PE LG ++ L  L   GTA+                        
Sbjct: 846  SLETLIVSGCSNLNKLPEELGSLQYLMILQADGTAITQPPFSLVHLRNLKELSFRGCKGS 905

Query: 701  -STSWYSYIPINLMRK----SVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSL 755
             S SW   +   L+R+       L+LP LSGL SL+ L+L+ CNL +G++  ++G L  L
Sbjct: 906  TSNSWIXSLVFRLLRRENSDGTGLQLPYLSGLYSLKYLDLSGCNLTDGSINDNLGRLRFL 965

Query: 756  KELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLD 815
            +EL LS+N+ V +P  +  LS L  + +  CK LQ + +LPP+I+ +    C SL  L  
Sbjct: 966  EELNLSRNNLVMVPEGVHRLSNLRVLSVNQCKSLQEISKLPPSIKSLDAGDCISLEFLSI 1025

Query: 816  ALKLCKSDSTMIACLD--SLKLLGNKSLAFSMLREYLEAVSNT---RQHLSVVVPGSEIP 870
                     +  +CL   S KL    +LA   +   LE +          S+V+PGS IP
Sbjct: 1026 PSPQSPQYLSSSSCLHPLSFKLSNCFALAQDNVATILEKLHQNFLPEIEYSIVLPGSTIP 1085

Query: 871  EWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
            EWF + + GSS T+  P N +N K  +G+A+C VF
Sbjct: 1086 EWFQHPSIGSSETIELPPNWHN-KDFLGFALCSVF 1119


>gi|359493483|ref|XP_003634610.1| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 1274

 Score =  617 bits (1590), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 424/1074 (39%), Positives = 586/1074 (54%), Gaps = 159/1074 (14%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M+SR E +  L+  GS DVRM+GI GM G+GKTTIA+V+Y+ I  +FE   FL NVRE S
Sbjct: 193  MESRLEAMDSLLCIGSLDVRMVGIWGMAGIGKTTIAKVIYERIYTQFEGCCFLSNVREES 252

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
             K GL  LQ +LLSQ+LK  + +      GI+ +   L  +KVL+++DDV   KQL+ LA
Sbjct: 253  YKHGLPYLQMELLSQILKERNPNAGLFNKGINFMKDVLHSRKVLIILDDVDQRKQLEDLA 312

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            G+  WFGSGSRIIIT+RD HLL    VD +Y+   L+ DEAL+LF + AF+     ++  
Sbjct: 313  GDNNWFGSGSRIIITTRDRHLLTCQEVDAIYEVKELDNDEALKLFCLYAFRHKHGTEDFR 372

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            QL    + Y  GLPLAL+VLGS L  + + EW+S L++L+  P  E+ ++L+ SF+GL +
Sbjct: 373  QLCGHALDYTSGLPLALKVLGSSLYTKGIHEWKSELDKLKQFPNKEVQNVLKTSFEGLDD 432

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             E+ IFLDIA F+KG+D+D+V + L+ CGF   IGIR L +K LIT+  N L MHDLLQE
Sbjct: 433  NEQNIFLDIAFFYKGHDKDFVGDILDSCGFFFGIGIRNLEDKSLITISENKLCMHDLLQE 492

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G +IV RQ  E  G+RSRL   E++ HVLT +TGTE VEGI LD    +    L  S  
Sbjct: 493  MGWEIV-RQKSEVPGERSRLRVHEDINHVLTTNTGTEAVEGIFLDLSASKE---LNFSID 548

Query: 361  AFSKMTNLRLLKICNLQLPNGLEY----------------------------------LS 386
            AF+KM  LRLLKICN+Q+   L Y                                  LS
Sbjct: 549  AFTKMKRLRLLKICNVQIDRSLGYLSKKELIAYTHDVWIERNYLYTQNKLHLYEDSKFLS 608

Query: 387  NRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLI 446
            N LR L W GYPLK  PSN   +K +E+ MC+SR+ + W+G K  +KLK + LSHS++L 
Sbjct: 609  NNLRDLYWHGYPLKSFPSNFHPEKLVELNMCFSRLKQPWEGKKGFEKLKSIKLSHSQHLT 668

Query: 447  RMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEK 506
            ++PDF+G PNL +LIL+GCT L E+HPS+    KLI LN++ C  L +    I M+SL+ 
Sbjct: 669  KIPDFSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIHMESLQI 728

Query: 507  LNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELL 566
            L L                  SG  K ++FPE+  +MEHL  L LEGTAI+GLPLSIE L
Sbjct: 729  LTL------------------SGCSKLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENL 770

Query: 567  SGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS 626
            +GL LLNLK C+SLE LP ++  LK L++L LSGCS+LK  P+ + S++ L+EL  DG+ 
Sbjct: 771  TGLALLNLKECKSLESLPRSIFKLKSLKTLILSGCSELKDLPDNLGSLQCLTELNADGSG 830

Query: 627  IKEVPSSIELLTKLELLNLSDCK-------NLV-----------RLPSSIIALKSLKTLN 668
            ++EVP SI LLT L++L+L+ CK       N++           RLP S   L SL+ L 
Sbjct: 831  VQEVPPSITLLTNLQILSLAGCKGGESKSRNMIFSFHSSPTEELRLP-SFSGLYSLRVLI 889

Query: 669  LSGCFKLEN-VPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGL 727
            L  C   E  +P  LG I SLE LD+S                   R S      SLSGL
Sbjct: 890  LQRCNLSEGALPSDLGSIPSLERLDLS-------------------RNSFITIPASLSGL 930

Query: 728  CSLRKLNLTDCNLMEG--ALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELED 785
              LR L L  C  ++    LPS + +        L+ +S  SL T     S   + +  D
Sbjct: 931  SRLRSLTLEYCKSLQSLPELPSSVES--------LNAHSCTSLETFTCSSSAYTSKKFGD 982

Query: 786  CKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMI--ACLDSLKLLGNKSLAF 843
                            +R N         +  +L ++  + I  A L+ ++L+       
Sbjct: 983  ----------------LRFN-------FTNCFRLGENQGSDIVGAILEGIQLM------- 1012

Query: 844  SMLREYL---EAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYA 900
            S + ++L     +       + +VPG+ IPEWF +Q+ G S+ +  P + YN  KL+G A
Sbjct: 1013 SSIPKFLVPDRGIPTPHNEYNALVPGNRIPEWFRHQSVGCSVNIELPQHWYN-TKLMGLA 1071

Query: 901  ICCVFHVLKNSRGNNCFGSYP-THQLNCHIG--------HGIYGIGFRDKFGQAGSDHLW 951
             C   +      GN   G+ P +  L C++         H +Y      KF +  SDH  
Sbjct: 1072 FCAALNFKGAMDGNP--GTEPSSFGLVCYLNDCFVETGLHSLYTPPEGSKFIE--SDHTL 1127

Query: 952  LLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDE 1005
              Y+S      + + L +      S++V  SF    G   EVK CG+  VY ++
Sbjct: 1128 FEYISLAR---LEICLGNWFRKL-SDNVVASF-ALTGSDGEVKKCGIRLVYEED 1176


>gi|356560337|ref|XP_003548449.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1289

 Score =  615 bits (1586), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 346/727 (47%), Positives = 472/727 (64%), Gaps = 56/727 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DSR +++  LM    +DVR IG+ GMGG+GKTTIAR VY+ I  +F  S FL+N+RE+S
Sbjct: 195 IDSRMKEVYSLMGISLNDVRFIGLWGMGGIGKTTIARFVYEAIKGDFNVSCFLENIREVS 254

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
              GLV +Q++LL  L  +  +  +N+ DG +++ + L  KK+LLV+DDV ++ QL++LA
Sbjct: 255 KTNGLVHIQKELLFHL-NVRSSDFYNLHDGKNIIANSLSNKKILLVLDDVSELSQLENLA 313

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G +EWFGSGSR+IIT+RD+HLLKTHGV    K  GL  +EAL+LF +KAFK  QP +E +
Sbjct: 314 GKQEWFGSGSRVIITTRDKHLLKTHGVHLTCKAKGLAQNEALKLFCLKAFKQDQPKEEYL 373

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            L   ++ YA GLPLALEVLGS L GR+V+ W S LE++   P S+I D L+IS+D LQ 
Sbjct: 374 NLCKEVVEYARGLPLALEVLGSHLYGRTVEVWHSALEQIRSFPHSKIQDTLKISYDSLQP 433

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQ 299
             +K+FLDIACFFKG D D V N L+ CG+HP IGI +LIE+CL+T+     L MHDLLQ
Sbjct: 434 PYQKMFLDIACFFKGMDIDEVKNILKNCGYHPEIGIDILIERCLVTLDRMKKLGMHDLLQ 493

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA-- 357
           E+G+ IV ++SP + GKRSRLW ++++ +VLT++ GT+ ++GIVL      N V  C   
Sbjct: 494 EMGRNIVFQESPNDPGKRSRLWSQKDIDYVLTKNKGTDEIQGIVL------NLVQPCDYE 547

Query: 358 ---SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
              S +AFSK + L+LL +C++QLP GL  L + L++L WRG PLK LP N ++D+ +++
Sbjct: 548 GRWSTEAFSKTSQLKLLMLCDMQLPRGLNCLPSSLKVLHWRGCPLKTLPLNNKLDEVVDL 607

Query: 415 YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
            + +SRI +LW+G K L+KLK + LS S+NL + PDF GAPNLE L+LEGCT L E+HPS
Sbjct: 608 KLPHSRIEQLWRGTKLLEKLKSINLSFSKNLKQSPDFGGAPNLESLVLEGCTSLTEVHPS 667

Query: 475 LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFR 534
           L+ H KL ++N+KDC  L TLP K+ M SL+ LNL                  SG  +F+
Sbjct: 668 LVRHKKLAMMNLKDCKRLKTLPSKMEMSSLKDLNL------------------SGCSEFK 709

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
             PE  E MEHLS L LEGTAI  LP S+  L GL  L LKNC++L  LP T  NL  L 
Sbjct: 710 YLPEFGESMEHLSVLSLEGTAIAKLPSSLGCLVGLAHLYLKNCKNLVCLPDTFHNLNSLI 769

Query: 595 SLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV-- 652
            L +SGCSKL   PE ++ +K L EL   GT+I+E+PSS+  L  L+ ++ + CK  V  
Sbjct: 770 VLNVSGCSKLGCLPEGLKEIKSLEELDASGTAIQELPSSVFYLENLKSISFAGCKKPVSN 829

Query: 653 ----------------------RLPSSIIALKSLKTLNLSGC-FKLENVPETLGQIESLE 689
                                 RLP S + L SL  +NLS C    E+ P+    + SL+
Sbjct: 830 SVSGFLLPFQWVFGNQQTPTAFRLPPSKLNLPSLMRINLSYCNLSEESFPDGFRHLSSLQ 889

Query: 690 ELDISGT 696
            LD++G 
Sbjct: 890 FLDLTGN 896



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 165/506 (32%), Positives = 250/506 (49%), Gaps = 64/506 (12%)

Query: 545  HLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            +L  L LEG T++  +  S+     L ++NLK+C+ L+ LP  +  +  L+ L LSGCS+
Sbjct: 649  NLESLVLEGCTSLTEVHPSLVRHKKLAMMNLKDCKRLKTLPSKM-EMSSLKDLNLSGCSE 707

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
             K  PE   SM+ LS L L+GT+I ++PSS+  L  L  L L +CKNLV LP +   L S
Sbjct: 708  FKYLPEFGESMEHLSVLSLEGTAIAKLPSSLGCLVGLAHLYLKNCKNLVCLPDTFHNLNS 767

Query: 664  LKTLNLSGCFKLENVPETLGQIESLEELDISGTAV-----------------------PH 700
            L  LN+SGC KL  +PE L +I+SLEELD SGTA+                       P 
Sbjct: 768  LIVLNVSGCSKLGCLPEGLKEIKSLEELDASGTAIQELPSSVFYLENLKSISFAGCKKPV 827

Query: 701  STSWYSYI-PINLM----RKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCS 754
            S S   ++ P   +    +   A +LP S   L SL ++NL+ CNL E + P    +L S
Sbjct: 828  SNSVSGFLLPFQWVFGNQQTPTAFRLPPSKLNLPSLMRINLSYCNLSEESFPDGFRHLSS 887

Query: 755  LKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVT-L 813
            L+ L L+ N+FV+LP+ I++L+KL  + L  CK+L+ LP+LP  ++ +  + C SL T  
Sbjct: 888  LQFLDLTGNNFVTLPSCISNLTKLEILLLNLCKKLKRLPELPSRMKHLDASNCTSLETSK 947

Query: 814  LDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLRE---YLEAVSNTRQHLSVVVPGSEIP 870
             +  K C              L  +    F   RE   YLE +   R    +++PGSEIP
Sbjct: 948  FNPSKPC-------------SLFASSPSNFHFSRELIRYLEELPLPRTRFEMLIPGSEIP 994

Query: 871  EWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHI- 929
             WF+ Q   S   +  P N     + VG+A+C +     N     C      H++ C++ 
Sbjct: 995  SWFVPQKCVSLAKIPVPHNC-PVNEWVGFALCFLLVSYANP-PEACH-----HEVECYLF 1047

Query: 930  -GHGIYGIGFRD-KFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWL 987
              +G   I  R+    +    HL++LYLS     D+        E    + +    + + 
Sbjct: 1048 GPNGKTIISSRNLPPMELDCPHLYILYLSIDKYRDMI------CEGVVGSEIEFVLKSYC 1101

Query: 988  GQGLEVKMCGLHPVYMDEVEELDQTT 1013
             Q LE+  CG   V   +VE++ + +
Sbjct: 1102 CQSLEIVRCGCRLVCKQDVEDIYENS 1127



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/148 (45%), Positives = 89/148 (60%), Gaps = 18/148 (12%)

Query: 426  KGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILN 485
            + IK L+KLK + LS S+NL + PDF GAPNLE L+LEGCT L E+HPSL+ H K +++N
Sbjct: 1160 QDIKLLEKLKSIDLSFSKNLKQSPDFDGAPNLESLVLEGCTSLTEVHPSLVRHKKPVMMN 1219

Query: 486  MKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEH 545
            ++DC  L TLP K+ M SL+ L+L                  SG  +F   PE  E ME 
Sbjct: 1220 LEDCKRLKTLPSKMEMSSLKYLSL------------------SGCSEFEYLPEFGESMEQ 1261

Query: 546  LSELHLEGTAIRGLPLSIELLSGLVLLN 573
            +S L+LE T I  LP S+  L GL  L+
Sbjct: 1262 MSVLNLEETPITKLPSSLGCLVGLAHLD 1289



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 3/110 (2%)

Query: 590  LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDC 648
            L+ L+S+ LS    LK+ P+      +L  L L+G TS+ EV  S+    K  ++NL DC
Sbjct: 1165 LEKLKSIDLSFSKNLKQSPDF-DGAPNLESLVLEGCTSLTEVHPSLVRHKKPVMMNLEDC 1223

Query: 649  KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
            K L  LPS +  + SLK L+LSGC + E +PE    +E +  L++  T +
Sbjct: 1224 KRLKTLPSKM-EMSSLKYLSLSGCSEFEYLPEFGESMEQMSVLNLEETPI 1272



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 3/130 (2%)

Query: 516  ISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNL 574
            I  L+ L ++D+S     ++ P+  +   +L  L LEG T++  +  S+      V++NL
Sbjct: 1162 IKLLEKLKSIDLSFSKNLKQSPDF-DGAPNLESLVLEGCTSLTEVHPSLVRHKKPVMMNL 1220

Query: 575  KNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSI 634
            ++C+ L+ LP  +  +  L+ L LSGCS+ +  PE   SM+ +S L L+ T I ++PSS+
Sbjct: 1221 EDCKRLKTLPSKM-EMSSLKYLSLSGCSEFEYLPEFGESMEQMSVLNLEETPITKLPSSL 1279

Query: 635  ELLTKLELLN 644
              L  L  L+
Sbjct: 1280 GCLVGLAHLD 1289


>gi|224114311|ref|XP_002332395.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832718|gb|EEE71195.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1144

 Score =  613 bits (1580), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 420/1072 (39%), Positives = 594/1072 (55%), Gaps = 162/1072 (15%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-I 59
            +DSR E L   +   + +   IGICGMGG+GKTT+ARV+YD I   FE S FL NVRE  
Sbjct: 39   IDSRLEVLNGYIGEETGEAIFIGICGMGGIGKTTVARVLYDRIRRRFEGSCFLANVREAF 98

Query: 60   SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            + K G  SLQ++LLS +L   D +I +   GI+M+  +LQR K+L+V+DDV D KQL+ L
Sbjct: 99   AEKDGPRSLQKKLLSDILMERDINICDSSTGIEMIKQKLQRIKILVVLDDVNDRKQLEYL 158

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            A    WFG GSRIIITSRD ++L  +   ++Y+   LN D+AL LF+ KAFK  QP +  
Sbjct: 159  AKEPGWFGPGSRIIITSRDTNVLIGNDDTKIYEAEKLNDDDALMLFSQKAFKNDQPAEGF 218

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            V+LS +++ YA GLPLA EV+GSFL  RS+ EWR  + R+   P  +I+D+L++SFDGL 
Sbjct: 219  VELSKQVVDYANGLPLAHEVIGSFLYERSIPEWRGAINRMNEIPDGKIIDVLRVSFDGLH 278

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
            E +KKIFLDIACF KG  +D +T  LE  GFH  IGI VLIE+ LI+V  + +WMHDLLQ
Sbjct: 279  ESDKKIFLDIACFLKGFKKDRITRILESRGFHAGIGIPVLIERSLISVSRDQVWMHDLLQ 338

Query: 300  ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
             +G++IV+ +SPEE G+RSRLW  E+VC  L ++TG E +E I LD    ++  +   + 
Sbjct: 339  IMGKEIVRCESPEEPGRRSRLWTYEDVCLALMDNTGKEKIEAIFLDMPGIKDAQW---NM 395

Query: 360  KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
            +AFSKM+ LRLLKI N+QL  G E LSN+LR L W  YP K LP+ LQ+D+ +E++M  S
Sbjct: 396  EAFSKMSKLRLLKINNVQLSEGPEDLSNKLRFLEWYSYPSKSLPAGLQVDELVELHMANS 455

Query: 420  RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
             + +LW G K    LK++ LS+S NL R PD TG PNLE LILEGCT L E+HPSL  H 
Sbjct: 456  NLDQLWYGCKSALNLKIINLSYSLNLSRTPDLTGIPNLESLILEGCTSLSEVHPSLGSHK 515

Query: 480  KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
             L  +N+ +C S+  LP  + M+SL+                + TLD  G LK  +FP++
Sbjct: 516  NLQYVNLVNCKSIRILPSNLEMESLK----------------VFTLD--GCLKLEKFPDV 557

Query: 540  VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
            V +M  L  L L+ T I  L  SI  L GL LL++ +C++L+ +P ++S LK L+ L LS
Sbjct: 558  VRNMNCLMVLRLDETGITKLSSSIRHLIGLGLLSMNSCKNLKSIPSSISCLKSLKKLDLS 617

Query: 600  GCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV------R 653
            GCS+LK  P+ +  ++ L E  + GTSI++ P+SI LL  L++L+   CK +       R
Sbjct: 618  GCSELKNIPKNLGKVESLEEFDVSGTSIRQPPASIFLLKSLKVLSFDGCKRIAVNPTDHR 677

Query: 654  LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLM 713
            LP S+  L SL+ L+L  C                   ++   A+P    + S +    +
Sbjct: 678  LP-SLSGLCSLEVLDLCAC-------------------NLREGALPEDIGFLSSLRSLDL 717

Query: 714  RKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSI 772
             ++  + LP S++ L  L +L L DC+++E                              
Sbjct: 718  SQNNFVSLPQSINQLFELERLVLEDCSMLE------------------------------ 747

Query: 773  THLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDS 832
                              SLP++P  ++ V +NGC SL  + D +KL  S  +   CL+ 
Sbjct: 748  ------------------SLPEVPSKVQTVNLNGCISLKEIPDPIKLSSSKISEFLCLNC 789

Query: 833  LKLL---GNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSN 889
             +L    G  S+  +ML  YL+ +SN R    +VVPG+EIP WF ++++GSSI+V  PS 
Sbjct: 790  WELYEHNGQDSMGLTMLERYLKGLSNPRPGFGIVVPGNEIPGWFNHRSKGSSISVQVPS- 848

Query: 890  LYNKKKLVGYAICCVF-----------HVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGF 938
                   +G+  C  F           H   N R N     YP+    C   + I     
Sbjct: 849  -----WSMGFVACVAFSANGESPSLFCHFKTNGREN-----YPSPM--CISCNSI----- 891

Query: 939  RDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCG- 997
                 Q  SDH+WL YLS    +D  + L+       SN + +SF     + ++VK CG 
Sbjct: 892  -----QVLSDHIWLFYLS----FDYLIELKEWQHGSFSN-IELSFHSSQPR-VKVKNCGV 940

Query: 998  --LHPVYMDEVEELDQTTNQPSRFTVYNLNEFDQHFVGSKMIVATTSKRSLT 1047
              L  +Y+         T+QPS            HF+ +    A++ K SLT
Sbjct: 941  CLLSSLYI---------TSQPS----------SAHFIVTSKETASSYKASLT 973


>gi|255561514|ref|XP_002521767.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223538980|gb|EEF40577.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 994

 Score =  612 bits (1577), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 425/1081 (39%), Positives = 591/1081 (54%), Gaps = 121/1081 (11%)

Query: 27   MGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLADNSIWN 86
            MGG+GKTTIA V+++ IS  F++  FL +VR+ S   GL  LQ  L S LL+  + ++  
Sbjct: 1    MGGIGKTTIAGVIFNRISALFDSCCFLADVRKESETTGLPHLQEALFSMLLEDENLNMHM 60

Query: 87   VFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHG 146
            +      + +RL RKKVL+V+DDV   +QL+ LAG   W+G GSRIIIT+RD HLL +H 
Sbjct: 61   LSTEPSCIKTRLHRKKVLVVLDDVNSSRQLELLAG-IHWYGPGSRIIITTRDRHLLVSHA 119

Query: 147  VDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSG 206
            VD VY+   LN + AL+LF+  AFK      E  +LS R I Y  GLPLAL+VLGS L G
Sbjct: 120  VDFVYEVKDLNEEHALELFSRYAFKQKHRTAEFTELSIRAIDYCKGLPLALKVLGSSLYG 179

Query: 207  RSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLE 266
            RS ++W  +L RLE     +I   L+ISFDGL EL K +FLDIAC+F+G D+DYV   L+
Sbjct: 180  RSENQWNDSLNRLEKHFNKDIQQTLRISFDGLAELNKSLFLDIACYFRGQDKDYVAKLLK 239

Query: 267  GCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEV 326
              GF P  GI  LI+  L+TV +NTL MHDLLQ++G+ IV++QS ++ GKRSRLW  E+V
Sbjct: 240  SFGFFPESGISELIDHSLVTVFDNTLGMHDLLQDMGRDIVRQQSLKDPGKRSRLWDHEDV 299

Query: 327  CHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKIC------NLQLPN 380
              VL E +G+E VE +V+D    + + +   S +AF KM NLRLL +        + L  
Sbjct: 300  VQVLMEESGSEHVECMVIDLSKTDEKKF---SVEAFMKMKNLRLLDVHGAYGDRKIHLSG 356

Query: 381  GLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILS 440
              E+L  +L+ L W GYPLK+LPSN    K I + M  S I  LW G   L +L+ + LS
Sbjct: 357  DFEFLYYKLKCLCWEGYPLKYLPSNFNPKKIIMLEMPQSSIKRLWGGRLELKELQFIDLS 416

Query: 441  HSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKIL 500
            HS+ L   PDFTG PNLE LILEGCT L ++HPS+ +  KLI+LN+KDC  L +LPG I 
Sbjct: 417  HSQYLTETPDFTGVPNLETLILEGCTSLSKVHPSIGVLKKLILLNLKDCNCLRSLPGSI- 475

Query: 501  MKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLP 560
                             GL+ L+ L +SG  K  +FPEIV  M HLS+L L+GTAI  +P
Sbjct: 476  -----------------GLESLNVLVLSGCSKLEKFPEIVGDMAHLSKLGLDGTAIAEVP 518

Query: 561  LSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL 620
             S   L+GL  L+L+NC++LE LP  +++LK L++L L GCSKLK  P+ +  ++ L +L
Sbjct: 519  HSFANLTGLTFLSLRNCKNLEKLPSNINSLKYLKNLDLFGCSKLKSLPDSLGYLECLEKL 578

Query: 621  FLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
             L  TS+++ PSSI L                        LK LK L+  G         
Sbjct: 579  DLGKTSVRQPPSSIRL------------------------LKYLKVLSFHG--------- 605

Query: 681  TLGQIESLEELDISGTAVPHSTSW-YSYIPI-NLMRKSVALKLPSLSGLCSLRKLNLTDC 738
             +G               P +  W Y  + I  +   +V L LPSL+GL SL +L+L+DC
Sbjct: 606  -IG---------------PIAWQWPYKILSIFGITHDAVGLSLPSLNGLLSLTELDLSDC 649

Query: 739  NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPN 798
            NL +  +P+D   L SL+ L + +N+FV++P SI+ L +L  + L+DCK L++L +LP  
Sbjct: 650  NLSDKMIPADFYTLSSLEVLNIGRNNFVNIPASISQLPRLRFLYLDDCKNLKALRKLPTT 709

Query: 799  IRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLL----GNKSLAFSMLREYLEAV- 853
            I ++  N C SL TL     +    +  I    +   L    GN S AF  LR +L+++ 
Sbjct: 710  IHEISANNCTSLETLSSPEVIADKWNWPIFYFTNCSKLAVNQGNDSTAFKFLRSHLQSLP 769

Query: 854  -------SNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF- 905
                   S T     V+VPG+E+P WF +QN GSS+ +      YN +K  G AIC  F 
Sbjct: 770  MSQLQDASYTGCRFDVIVPGTEVPAWFSHQNVGSSLIIQLTPKWYN-EKFKGLAICLSFA 828

Query: 906  -----HVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKF-----GQAGSDHLWLLYL 955
                 H+L +    +         + C +    Y      KF         S+HLW+ + 
Sbjct: 829  THENPHLLPDGLSTDI-------AIYCKLEAVEYTSTSSFKFLIYRVPSLKSNHLWMGFH 881

Query: 956  SRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEELDQTTNQ 1015
            SR     I     + L      ++ VSFE  +   +EVK CG+  VY  + ++ +    Q
Sbjct: 882  SR-----IGFGKSNWLN--NCGYLKVSFESSV-PCMEVKYCGIRFVYDQDEDDYNLIPFQ 933

Query: 1016 PSRFTVYNLNEFDQHFVGSKMIV--ATTSKRSLTEYFGAEASGSGCC-DDEEPQPKRFRE 1072
             S   +      D   V   M+V  A   KR   +Y  A +S SG    +EEP  KR +E
Sbjct: 934  SSHLHLSENLGLDYQAVDVPMVVQEACKLKRGYDDYNEAGSSSSGSSYKEEEPYAKRLKE 993

Query: 1073 L 1073
             
Sbjct: 994  F 994


>gi|111146892|gb|ABH07384.1| CMR1 [Phaseolus vulgaris]
          Length = 1133

 Score =  610 bits (1573), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 411/1043 (39%), Positives = 588/1043 (56%), Gaps = 142/1043 (13%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +DSR ++L  L+D   +D+R IGI GMGG+GKTTIAR+VY+ +  +F+ S FL+N+RE+S
Sbjct: 195  VDSRMKELNSLVDIWLNDIRFIGIWGMGGIGKTTIARLVYEAVKEKFKVSCFLENIRELS 254

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
               GLV +Q+++LS L  +  N   N++DG  ++ + L  KKVLLV+DDV D+ QL++L 
Sbjct: 255  KTNGLVHIQKEILSHL-NVRSNDFCNLYDGKKIIANSLSNKKVLLVLDDVSDISQLENLG 313

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            G REWFG GSR+IIT+RD+HLLKT+GVD  YK  GL  +EALQLF +KAFK  QP +  +
Sbjct: 314  GKREWFGPGSRLIITTRDKHLLKTYGVDMTYKARGLAQNEALQLFCLKAFKQDQPKEGYL 373

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
             L   ++ YA GLPLALEVLGS L GRS + W S LE++   P S+I D L+IS+D L+ 
Sbjct: 374  NLCKGVVEYARGLPLALEVLGSHLCGRSTEVWHSALEQIRSFPHSKIQDTLKISYDSLEP 433

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH--NNTLWMHDLL 298
             EKK+FLDIACFF G D D V N LE CG HP+IGI +LIE+ L+T+    N L MHDLL
Sbjct: 434  TEKKLFLDIACFFVGMDIDEVVNILENCGDHPIIGIDILIERSLVTLDMTKNKLGMHDLL 493

Query: 299  QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
            QE+G+ IV ++SP + GKRSRLW ++++ +VLT++ GT+ + GIVL+      + Y C +
Sbjct: 494  QEMGRNIVYQESPNDPGKRSRLWSQKDIDYVLTKNKGTDEIRGIVLNLV----QPYDCEA 549

Query: 359  ---AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
                ++FSK++ LRLLK+C++QLP GL  L + L+++ WRG PLK LP + Q+D+ +++ 
Sbjct: 550  RWNTESFSKISQLRLLKLCDMQLPRGLNCLPSALKVVHWRGCPLKTLPLSNQLDEVVDLK 609

Query: 416  MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
            + YS+I +LW G + L+KL+ + LS S+NL + PDF G PNLE L+L+GCT L E+HPSL
Sbjct: 610  LPYSKIEQLWHGTELLEKLRFINLSFSKNLKQSPDFVGVPNLESLVLKGCTSLTEVHPSL 669

Query: 476  LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
            + H KL+ LN +DC  L TLP K+ M SL  LNL                  SG  +F+ 
Sbjct: 670  VRHKKLVWLNFEDCKKLKTLPRKMEMSSLNDLNL------------------SGCSEFKC 711

Query: 536  FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
             PE  E MEHLS L LEGTAI  LP S+  L GL  L+ KNC++L  LP T+  L+ L  
Sbjct: 712  LPEFAESMEHLSVLCLEGTAITKLPTSLGCLIGLSHLDTKNCKNLVCLPDTIHKLRSLIV 771

Query: 596  LKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV--- 652
            L +SGCSKL   PE ++ +K L EL    T+I+E+PS +  L  L  ++++ CK  V   
Sbjct: 772  LNVSGCSKLSSLPEGLKEIKCLEELDASETAIQELPSFVFYLENLRDISVAGCKGPVSKS 831

Query: 653  ---------------------RLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
                                 RLP S ++L SLK +NLS C                   
Sbjct: 832  VNSFFLPFKRLFGNQQTSIGFRLPPSALSLPSLKRINLSYC------------------- 872

Query: 692  DISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGN 751
                               NL  +S      SLS   SL  LNLT  N +  +LPS I  
Sbjct: 873  -------------------NLSEESFPGDFCSLS---SLMILNLTGNNFV--SLPSCISK 908

Query: 752  LCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL- 810
            L  L+ L L+                        CK+LQ+LP+LP N+R +  + C S  
Sbjct: 909  LAKLEHLILN-----------------------SCKKLQTLPKLPSNMRGLDASNCTSFE 945

Query: 811  VTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLR-EYLEAVSNTRQHLSVVVPGSEI 869
            ++  +  K C    ++ A     K    K L   + + + L+ +   ++   +++ GSEI
Sbjct: 946  ISKFNPSKPC----SLFA--SPAKWHFPKELESVLEKIQKLQKLHLPKERFGMLLTGSEI 999

Query: 870  PEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHI 929
            P WF      S   ++ P +     + VG+A+C +  V      + C     +H+++C++
Sbjct: 1000 PPWFSRSKTVSFAKISVPDDC-PMNEWVGFALCFLL-VSYVVPPDVC-----SHEVDCYL 1052

Query: 930  --GHGIYGIGFRDKFGQAGSD-HLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPW 986
               +G   I  R        D HL++ YLS     DI + + S+    E        + +
Sbjct: 1053 FGPNGKVFITSRKLPPMEPCDPHLYITYLSFDELRDI-ICMGSDYREIE-----FVLKTY 1106

Query: 987  LGQGLEVKMCGLHPVYMDEVEEL 1009
                LE+  CG   V   +VE++
Sbjct: 1107 CCHSLEIVRCGSRLVCKQDVEDI 1129


>gi|224108373|ref|XP_002333401.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222836441|gb|EEE74848.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1279

 Score =  607 bits (1564), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 414/1035 (40%), Positives = 573/1035 (55%), Gaps = 157/1035 (15%)

Query: 32   KTTIARVVYDLISHEFEASGFLDNVREI-SSKGGLVSLQRQLLSQLLKLADNSIWNVFDG 90
            KTT+ARVVYD    +FE S FL NVRE+ + K G   LQ QLLS++L +   S+W+   G
Sbjct: 239  KTTVARVVYDRFRLQFEGSCFLANVREVFAEKDGPCRLQEQLLSEIL-MERASVWDSSRG 297

Query: 91   IDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEV 150
            I+M+  RL+ KK+LL++DDV D +QL+ LA  R WFG GSRIIITSRD+ +L  +GV  +
Sbjct: 298  IEMIKRRLRLKKILLILDDVDDKEQLEFLAEERGWFGPGSRIIITSRDKQVLTRNGVARI 357

Query: 151  YKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVD 210
            Y+   LN D+AL LF+ KAFK  QP ++ + LS +++ YA GLPLALEV+GSFL GRS+ 
Sbjct: 358  YEGEKLNDDDALMLFSQKAFKNDQPAEDFLDLSKQVVGYASGLPLALEVIGSFLHGRSIP 417

Query: 211  EWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGF 270
            EWR  + R+   P  EI+ +L +SFDGL ELEKKIFLDIACF KG   D +T  L+G GF
Sbjct: 418  EWRGAINRMNEIPDREIIKVLLVSFDGLHELEKKIFLDIACFLKGFKIDRITRILDGRGF 477

Query: 271  HPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVL 330
            H  IGI VLIE+ LI+V  + +WMH+LLQ++G++I++R+SPEE G+RSRLW  ++VC  L
Sbjct: 478  HASIGIPVLIERSLISVSRDQVWMHNLLQKMGKEIIRRESPEEPGRRSRLWTYKDVCLAL 537

Query: 331  TESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLR 390
             ++TG E VE I LD    +   +   + KAFSKM+ LRLLKI N+QL  G E LSN LR
Sbjct: 538  MDNTGKEKVEAIFLDMPGIKEARW---NMKAFSKMSRLRLLKIDNVQLFEGPEDLSNNLR 594

Query: 391  LLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD 450
             L W  YP K LP+ LQ+D+ +E++M  S + +LW G K    LK++ LS+S NL + PD
Sbjct: 595  FLEWHSYPSKSLPAGLQVDELVELHMANSNLEQLWYGCKSAVNLKIINLSNSLNLSQTPD 654

Query: 451  FTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK 510
             TG PNL+ LILEGCT L E+HPSL  H KL  +N+ +C S+  LP  + M+SLE     
Sbjct: 655  LTGIPNLKSLILEGCTSLSEVHPSLAHHKKLQHVNLVNCKSIRILPNNLEMESLE----- 709

Query: 511  SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLV 570
                       + TLD  G  K  +FP+I  +M  L  L L+ T I  L  SI  L GL 
Sbjct: 710  -----------VCTLD--GCSKLEKFPDIAGNMNCLMVLRLDETGITKLSSSIHYLIGLG 756

Query: 571  LLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEV 630
            LL++ NC++L+ +P ++  LK L+ L LSGCS+LK  PE +  ++ L E  + GTSI+++
Sbjct: 757  LLSMNNCKNLKSIPSSIGCLKSLKKLDLSGCSELKYIPENLGKVESLEEFDVSGTSIRQL 816

Query: 631  PSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEE 690
            P+S+ LL KL++L+L  CK +V LP S+  L SL+ L L  C                  
Sbjct: 817  PASVFLLKKLKVLSLDGCKRIVVLP-SLSGLCSLEVLGLRSC------------------ 857

Query: 691  LDISGTAVPHSTSWYSYIPINLMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDI 749
             ++   A+P    W S +    + ++  + LP S++ L  L  L L DC ++E       
Sbjct: 858  -NLREGALPEDIGWLSSLRSLDLSQNNFVSLPKSINRLSELEMLVLEDCTMLE------- 909

Query: 750  GNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCAS 809
                                                     SLP++P  ++ V +NGC S
Sbjct: 910  -----------------------------------------SLPEVPSKVQTVYLNGCIS 928

Query: 810  LVTLLDALKLCKSDSTMIACLDSLKLL---GNKSLAFSMLREYLEAVSNTRQHLSVVVPG 866
            L T+ D +KL  S  +   CL+  +L    G +S+   ML  YL+ +SN R    + VPG
Sbjct: 929  LKTIPDPIKLSSSKRSEFICLNCWELYNHNGQESMGLFMLERYLQGLSNPRTRFGIAVPG 988

Query: 867  SEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF-----------HVLKNSRGNN 915
            +EIP WF +Q++GSSI V  PS        +G+  C  F           H   N R N 
Sbjct: 989  NEIPGWFNHQSKGSSIRVEVPS------WSMGFVACVAFSSNGQSPSLFCHFKANGREN- 1041

Query: 916  CFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFE 975
                YP+    C   + I          Q  SDH+WL YLS    +D    L+       
Sbjct: 1042 ----YPSPM--CISCNSI----------QVLSDHIWLFYLS----FDYLKELQEWQHGSF 1081

Query: 976  SNHVNVSFEPWLGQGLEVKMCG---LHPVYMDEVEELDQTTNQPSRFTVYNLNEFDQHFV 1032
            SN + +SF      G++VK CG   L  VY+         T +PS            HF+
Sbjct: 1082 SN-IELSFHS-SRTGVKVKNCGVCLLSSVYI---------TPRPS----------SAHFI 1120

Query: 1033 GSKMIVATTSKRSLT 1047
             +    A++ K SL 
Sbjct: 1121 VTSKEAASSYKASLA 1135


>gi|359493293|ref|XP_002273413.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1640

 Score =  605 bits (1561), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 416/1067 (38%), Positives = 600/1067 (56%), Gaps = 105/1067 (9%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M+ R +++  L+   S+DVRMIGI G+ G+GKTT+A+VVY+ I H+F+ + FL N+    
Sbjct: 191  MERRLKEMASLIHIDSNDVRMIGISGIDGIGKTTLAKVVYNTIVHQFDGASFLLNISSQQ 250

Query: 61   SKGGLVSLQ--RQLLSQ-LLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
                 +  Q  R +L + +  ++DNS     +G   +      KKVL+V DDV    QL+
Sbjct: 251  LSLLQLQKQLLRDILGEDIPTISDNS-----EGSYEIRRMFMSKKVLVVFDDVNTYFQLE 305

Query: 118  SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
            SL  NR  FG GSRII+TS +++LL   G D  Y+   LN  EA QLF++ AF    P +
Sbjct: 306  SLIQNRSTFGPGSRIIVTSGNKNLLAGLGGDAFYEAKELNCKEATQLFSLHAFHMNSPQK 365

Query: 178  ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
              + LS  I+ Y  GLP+ALEVLGS L G+   EW+S L+RLE  P  +I ++L   F  
Sbjct: 366  GFIGLSRCIVDYCKGLPIALEVLGSLLFGKKKFEWKSVLQRLEKRPNMQIQNVLMRCFQT 425

Query: 238  LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDL 297
            L +  K +FLD+ACFFKG D D+V   LE    +  +G RVL ++ LI++ +  L MHDL
Sbjct: 426  LDDSMKDVFLDVACFFKGEDLDFVERILE----YGRLGTRVLNDRSLISIFDKKLLMHDL 481

Query: 298  LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
            +Q+   +IV++Q   E GK SRLW  E+V HVLT++TGTE +EGI L N    NE++L  
Sbjct: 482  MQKACWEIVRQQDHNEPGKWSRLWDPEDVHHVLTKNTGTERIEGIFL-NMSLSNEMHL-- 538

Query: 358  SAKAFSKMTNLRLLKICN-----------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNL 406
            ++ AF KMT LRLL++             + LP   ++ S+ LR L W G+ L+ LPSN 
Sbjct: 539  TSDAFKKMTRLRLLRVYQNAENNSIVSNTVHLPRDFKFPSHELRYLHWDGWTLESLPSNF 598

Query: 407  QMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
              +K  E+ + +S +  LWK  K L KL V+ L +S++L+  P+ + AP +E+LIL+GCT
Sbjct: 599  DGEKLGELSLRHSSLKYLWKRRKRLPKLVVIDLGNSQHLLECPNLSFAPRVERLILDGCT 658

Query: 467  RLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLD 526
             L E+HPS+    +L ILN+K+C  L   P                  +I+GL+ L  L+
Sbjct: 659  SLPEVHPSVTKLKRLTILNVKNCKMLHYFP------------------SITGLESLEVLN 700

Query: 527  VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVT 586
            +SG  K  +FPEI   ME+L EL+LEGTAI  LP S+  L  LVLL++KNC++L ILP  
Sbjct: 701  LSGCSKIDKFPEIQGCMENLLELNLEGTAIVELPPSVVFLPRLVLLDMKNCKNLMILPSN 760

Query: 587  VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLS 646
            + +LK L +L LSGCS L+ FPEI+  M+ L EL LDGTSIKE+  SI  L  L+LLN+ 
Sbjct: 761  IYSLKSLGTLVLSGCSGLEIFPEIMEDMECLQELLLDGTSIKELSPSIVHLKGLQLLNMR 820

Query: 647  DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH------ 700
             CKNL  LP+SI +L+SL+TL +SGC KL  +PE LG+++ L +L   GTA+        
Sbjct: 821  KCKNLRSLPNSICSLRSLETLIVSGCSKLSKLPEDLGRLQFLMKLQADGTAITQPPLSLF 880

Query: 701  -----------------STSWYSYIPINLMRK----SVALKLPSLSGLCSLRKLNLTDCN 739
                             S SW S +   L+ +       L+LP LSGL SL+ L+L+ CN
Sbjct: 881  HLRNLKELSFRRCKGSTSNSWISSLLFRLLHRENSDGTGLQLPYLSGLYSLKYLDLSGCN 940

Query: 740  LMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
            L + ++  ++G+L  L+EL LS+N+ V++P  +  LS L  I +  CK LQ + +LPP+I
Sbjct: 941  LTDRSINDNLGHLRFLEELNLSRNNLVTVPEEVNRLSHLRVISVNQCKSLQEISKLPPSI 1000

Query: 800  RQVRVNGCASLVTLLDALKLCKSDSTMIACLD--SLKLLGNKSLAFSMLREYLEAVSNT- 856
            + +    C SL +L           +  +CL   + KL    +LA   +   LE +    
Sbjct: 1001 KLLDAGDCISLESLSVLSPQSPQFLSSSSCLRLVTFKLPNCFALAQDNVATILEKLHQNF 1060

Query: 857  --RQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGN 914
                  S+V+PGS IPEWF + + GSS+T+  P N +N K  +G+A+C VF + ++    
Sbjct: 1061 LPEIEYSIVLPGSTIPEWFQHPSIGSSVTIELPPNWHN-KDFLGFALCSVFSLEED---E 1116

Query: 915  NCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPF 974
               G   T  L                      DH+WL+Y   Q    + +P  S+  P 
Sbjct: 1117 IIQGPAETEWLRL-------------------IDHIWLVY---QPGAKLMIPKSSS--PN 1152

Query: 975  ESNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEELDQTTNQPSRFTV 1021
            +S  +   F    G    VK CG+H +Y  + +   QT  + SRFTV
Sbjct: 1153 KSRKITAYFS-LSGASHVVKNCGIHLIYARDKKVNHQTRRKESRFTV 1198


>gi|37781356|gb|AAP44393.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1136

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 395/963 (41%), Positives = 558/963 (57%), Gaps = 96/963 (9%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M+S   ++  ++  GS  V  +GI GM G+GKTT+ARV+YD I  +F+ + FL  VR+ S
Sbjct: 198  MESHMHQVYKMLGIGSGGVHFLGILGMSGVGKTTLARVIYDNIRSQFQGACFLHEVRDRS 257

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            +K GL  LQ  LLS++L +    I + F+G +M   RLQ KKVLLV+DDV  + QL +LA
Sbjct: 258  AKQGLERLQEILLSEILVVKKLRINDSFEGANMQKQRLQYKKVLLVLDDVDHIDQLNALA 317

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            G REWFG GSRIIIT++D+HLL  +  +++Y+   LN  E+LQLF   AFK  +P +E  
Sbjct: 318  GEREWFGDGSRIIITTKDKHLLVKYETEKIYRMKTLNNYESLQLFKQHAFKKNRPTKEFE 377

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
             LSA++I++  GLPLAL+VLGSFL GR +DEW S +ERL+  P +EIL  L+ SF GL  
Sbjct: 378  DLSAQVIKHTDGLPLALKVLGSFLYGRGLDEWISEVERLKQIPENEILKKLEQSFTGLHN 437

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             E+KIFLDIACFF G  +D VT  LE   F PVIGI+VL+EKCLIT     + +H L+Q+
Sbjct: 438  TEQKIFLDIACFFSGKKKDSVTRILESFHFCPVIGIKVLMEKCLITTLQGRITIHQLIQD 497

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G  IV+R++ ++    SRLWK E++C VL  + GT+ +EG+ L   H  NE  +    K
Sbjct: 498  MGWHIVRREATDDPRMCSRLWKREDICPVLERNLGTDKIEGMSL---HLTNEEEVNFGGK 554

Query: 361  AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
            AF +MT LR LK  N  +  G E+L + LR L W GYP K LP++ + D+ + + +  SR
Sbjct: 555  AFMQMTRLRFLKFQNAYVCQGPEFLPDELRWLDWHGYPSKSLPNSFKGDQLVSLKLKKSR 614

Query: 421  IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
            I +LWK  K L KLK M LSHS+ LIRMPDF+  PNLE+L+LE CT L EI+ S+    K
Sbjct: 615  IIQLWKTSKDLGKLKYMNLSHSQKLIRMPDFSVTPNLERLVLEECTSLVEINFSIENLGK 674

Query: 481  LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
            L++LN+K+C +L TLP +I ++ LE L L                  +G  K R FPEI 
Sbjct: 675  LVLLNLKNCRNLKTLPKRIRLEKLEILVL------------------TGCSKLRTFPEIE 716

Query: 541  EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
            E M  L+EL+L+ T++  LP S+E LSG+ ++NL  C+ LE LP ++  LKCL++L +SG
Sbjct: 717  EKMNCLAELYLDATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSG 776

Query: 601  CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
            CSKLK  P+ +  +  L +L    T+I+ +PSS+ LL  L+ L+LS C  L    SS   
Sbjct: 777  CSKLKNLPDDLGLLVGLEQLHCTHTAIQTIPSSMSLLKNLKRLSLSGCNALSSQVSSSSH 836

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK 720
             +    +N           + L  + SL  LD+S   +                      
Sbjct: 837  GQKSMGVNF----------QNLSGLCSLIMLDLSDCNI---------------------- 864

Query: 721  LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLP-TSITHLSKLL 779
              S  G+ S    NL       G LPS       L+ L L  N+F ++P  SI+ L++L 
Sbjct: 865  --SDGGILS----NL-------GFLPS-------LERLILDGNNFSNIPAASISRLTRLK 904

Query: 780  NIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCK-SDSTMIACLDSLKLLGN 838
             ++L  C RL+SLP+LPP+I+ +  N C SL+++    K    SD++   C   +K   +
Sbjct: 905  TLKLLGCGRLESLPELPPSIKGIYANECTSLMSIDQLTKYPMLSDASFRNCRQLVKNKQH 964

Query: 839  KSLAFSMLREYLEAVS-NTRQHLSVVVPGSEIPEWFMYQNEGS-SITVTRPSNLYNKKKL 896
             S+  S+L++ LEA+  N R      VPG EIPEWF Y++ G+ S++V  P+N +     
Sbjct: 965  TSMVDSLLKQMLEALYMNVR--FGFYVPGMEIPEWFTYKSWGTQSMSVALPTN-WLTPTF 1021

Query: 897  VGYAICCVFH-----VLKNSRGNNCFGSYPTHQLNCHIGHGIYGI-GFRDK----FGQAG 946
             G+ +C VF      VL        FGS+  H L   I   +    G R K    FG  G
Sbjct: 1022 RGFTVCVVFDKWMPLVL------GPFGSHKVHGLKNMIWLNLKRYDGLRQKISTSFGPIG 1075

Query: 947  SDH 949
            S++
Sbjct: 1076 SEN 1078


>gi|359493487|ref|XP_003634612.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1162

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 393/982 (40%), Positives = 531/982 (54%), Gaps = 174/982 (17%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M+SR E +  L+   S DVRM+GI GM G+GKTTIA+V+Y+ I  +FE   FL NVRE S
Sbjct: 199  MESRLEAMDSLLSMFSDDVRMVGIWGMAGIGKTTIAKVIYERIYTQFEGCCFLSNVREES 258

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
             K GL  LQ +LLSQ+LK    +      GI+ +   L  +KVL+++DDV   +QL+ LA
Sbjct: 259  YKHGLPYLQMELLSQILKERKPNAGLFNKGINFMKDVLHSRKVLIILDDVDQRQQLEDLA 318

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            G   WFG GSRIIIT+RD HLL    VD +Y+   L+ DEAL+LF + AF+     ++  
Sbjct: 319  GYNNWFGLGSRIIITTRDRHLLTCQEVDAIYEVKELDNDEALKLFCLYAFRHRHGTEDFR 378

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            QL    + Y  GLPLAL+VLGS L  + + EW S L +L+  P  E+ ++L+ SF+GL +
Sbjct: 379  QLCGHALDYTSGLPLALKVLGSSLYTKGIHEWESELNKLKQFPNKEVQNVLKTSFEGLDD 438

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             E+ IFLDIA F+KG+D+D+V + L+ CGF   IGIR L +K LIT+  N L MHDLLQE
Sbjct: 439  NEQNIFLDIAFFYKGHDKDFVGDILDSCGFFFGIGIRNLEDKSLITISENKLCMHDLLQE 498

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G +IV RQ  E  G+RSRL   E++ HVLT +TGTE VEGI LD    +    L  S  
Sbjct: 499  MGWEIV-RQKSEVPGERSRLRVHEDINHVLTTNTGTEAVEGIFLDLSESKE---LNFSID 554

Query: 361  AFSKMTNLRLLKICNLQLPNGLEY----------------------------------LS 386
            AF+KM  LRLLKICN+Q+   L Y                                  LS
Sbjct: 555  AFTKMKRLRLLKICNVQIDRSLGYLSKKELIAYTHDVWTERNYLYTQNKLHLYEDSKFLS 614

Query: 387  NRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLI 446
            N LR L W GYPLK  PSN   +K +E+ MC+SR+ +LW+G K  +KLK + LSHS++L 
Sbjct: 615  NNLRDLYWHGYPLKSFPSNFHPEKLVELNMCFSRLKQLWEGKKGFEKLKSIKLSHSQHLT 674

Query: 447  RMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEK 506
            + PDF+G PNL +LIL+GCT L E+HPS+    KLI LN++ C  L +    I M+SL+ 
Sbjct: 675  KTPDFSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIHMESLQI 734

Query: 507  LNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELL 566
            L L                  SG  K ++FPE+  +MEHL  L LEGTAI+GLPLSIE L
Sbjct: 735  LTL------------------SGCSKLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENL 776

Query: 567  SGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS 626
            +GL LLNLK C+SLE LP ++  LK L++L L GCS+LK+ P+ + S++ L+EL  DG+ 
Sbjct: 777  TGLALLNLKECKSLESLPRSIFKLKSLKTLTLCGCSELKELPDDLGSLQCLAELNADGSG 836

Query: 627  IKEVPSSIELLTKLELLNLSDCK-------NLV-----------RLPSSIIALKSLKTLN 668
            I+EVP SI LLT L+ L+L+ CK       N+V           RLP S   L SL+ L 
Sbjct: 837  IQEVPPSITLLTNLQKLSLAGCKGGDSKSRNMVFSFHSSPTEELRLP-SFSGLYSLRVLI 895

Query: 669  LSGCFKLEN-VPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGL 727
            L  C   E  +P  LG I SLE LD+S                   R S      SLSGL
Sbjct: 896  LQRCNLSEGALPSDLGSIPSLERLDLS-------------------RNSFITIPASLSGL 936

Query: 728  CSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCK 787
              LR L L  C  ++                                             
Sbjct: 937  SRLRSLTLEYCKSLQ--------------------------------------------- 951

Query: 788  RLQSLPQLPPNIRQVRVNGCASLVT-------------------LLDALKLCKSDSTMI- 827
               SLP+LP ++  +  + C SL T                     +  +L ++  + I 
Sbjct: 952  ---SLPELPSSVESLNAHSCTSLETFSCSSGAYTSKKFGDLRFNFTNCFRLGENQGSDIV 1008

Query: 828  -ACLDSLKLLGNKSLAFSMLREYL--EAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
             A L+ ++L+       S + ++L    +       + +VPGS IPEWF +Q+ G S+ +
Sbjct: 1009 GAILEGIQLM-------SSIPKFLVPWGIPTPHNEYNALVPGSRIPEWFRHQSVGCSVNI 1061

Query: 885  TRPSNLYNKKKLVGYAICCVFH 906
              P + YN  KL+G A C   +
Sbjct: 1062 ELPPHWYN-TKLMGLAFCAALN 1082


>gi|359493275|ref|XP_002272079.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
 gi|296081003|emb|CBI18507.3| unnamed protein product [Vitis vinifera]
          Length = 1281

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 403/1084 (37%), Positives = 605/1084 (55%), Gaps = 135/1084 (12%)

Query: 1    MDSRC-EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            MD R  E +  ++D  S++VRMIGI G+GG+GKTT+A+VVY+ I+  F  + F+ NVRE 
Sbjct: 197  MDDRLNEVIPQMIDLSSNEVRMIGIYGLGGIGKTTVAKVVYNRIAPLFMITSFIANVRED 256

Query: 60   SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            S   GL+ LQ+QLL ++L    N I NV +GI M+  RL  K VLL++DDV  + QL+ L
Sbjct: 257  SKSRGLLHLQKQLLHEILPSRKNFISNVDEGIHMIQDRLCFKSVLLILDDVDTLDQLEGL 316

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            AG+  WFG GSRII+T+RD HLL  H +D  Y+   L+  EA++LF+  AF+   P ++ 
Sbjct: 317  AGDCNWFGPGSRIIVTTRDRHLLDVHKMDAFYEVKKLDQMEAIELFSQHAFEQKHPKEDY 376

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
              LS  ++R   GLPL L+VLG FL G+++ EW+S L++L+ EP  EI  +L+ S+D L 
Sbjct: 377  ETLSNSMVRCVDGLPLGLKVLGRFLFGKTILEWKSELQKLKQEPNQEIQGVLKRSYDELD 436

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
              +K IFLD+ACFF G D+D+VT  L+ C F+   GIRVL +KCLIT+ +N + MHDLLQ
Sbjct: 437  LTQKDIFLDVACFFNGEDKDHVTRILDACNFYAESGIRVLGDKCLITIFDNKILMHDLLQ 496

Query: 300  ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
            ++G+ IV++  P    K SRL   ++V  VL   +GTE +EGI+ D         +  + 
Sbjct: 497  QMGRYIVRQDYPNYPEKWSRLCYPDDVNRVLIRKSGTEAIEGILFD-LSIPKRKRIDITT 555

Query: 360  KAFSKMTNLRLLKIC------------NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
            K+F  MT LRLLKI              ++L    E+ S  LR L W GYPL+ LPS+  
Sbjct: 556  KSFEMMTRLRLLKIYWAHGSISIREDNKVKLSKDFEFPSYELRYLYWHGYPLESLPSSFY 615

Query: 408  MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFT-GAPNLEKLILEGCT 466
             +  IE+ MCYS + +LW+  + L+KL  + +S S++L+ +PDF+  APNLEKLIL+GC+
Sbjct: 616  AEDLIELDMCYSSLKQLWESDEPLEKLNTIRVSFSQHLMEIPDFSVRAPNLEKLILDGCS 675

Query: 467  RLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLD 526
             L E+HPS+    K+I+LN+K+C  L + P    M++LE LN                  
Sbjct: 676  SLLEVHPSIGRLKKIIVLNLKNCKQLSSFPSITDMEALEILNF----------------- 718

Query: 527  VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSI-ELLSGLVLLNLKNCRSLEILPV 585
             +G  + ++FP+I  +MEHL +L+L  TAI  LP SI + ++GLVLL+LK C++L  LP 
Sbjct: 719  -AGCSELKKFPDIQCNMEHLLKLYLSSTAIEELPSSIGQHITGLVLLDLKRCKNLTSLPT 777

Query: 586  TVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNL 645
             +  LK L  L LSGCSKL+ FPEI+  M++L EL LDGTSI+ +PSSIE L  L LLNL
Sbjct: 778  CIFKLKSLEYLFLSGCSKLENFPEIMEDMENLKELLLDGTSIEVLPSSIERLKGLVLLNL 837

Query: 646  SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWY 705
              CK LV LP S+  L+SL+T+ +SGC +L+ +P+ +G ++ L +L   GTA+       
Sbjct: 838  RKCKKLVSLPDSMCNLRSLQTIIVSGCSQLDQLPKNVGSLQHLVQLHADGTAIRQPPD-- 895

Query: 706  SYIPINLMR-----------------------------KSVALKLPSLSGLCSLRKLNLT 736
            S + +  +R                               + L+LPS   L SL  LN +
Sbjct: 896  SIVLLRGLRVLIYPGCKILPSSSLSSLFSFWLLHGRGSNGIGLRLPSFPCLSSLTNLNQS 955

Query: 737  DCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP 796
             CN                     S+N+F+S+PTSI+ L+ L ++ L  C+ L  +P+LP
Sbjct: 956  SCN--------------------PSRNNFLSIPTSISALTNLRDLWLGQCQNLTEIPELP 995

Query: 797  PNIRQVRVNGCASLVTLLDALKLCKSDSTMI-ACL------------DSLKLLGNKSLAF 843
            P++  +    C SL     ++ + +    +   CL            D+L+   +  ++F
Sbjct: 996  PSVPDINSRDCTSLSLSSSSISMLQWLQFLFYYCLKPVEEQFNDDKRDALQRFPDNLVSF 1055

Query: 844  SMLREYLEAVSNTRQH------LSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLV 897
            S         +  +Q        S+++PGS IP+W  ++N GS + V  P++ Y+    +
Sbjct: 1056 SCSEPSPSNFAVVKQKFFENVAFSMILPGSGIPKWIWHRNMGSFVKVKLPTDWYD-DDFL 1114

Query: 898  GYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGI--------YGIGFRDKFGQAGSDH 949
            G+A+C V   + +             ++ CH+            +G  F  K     S+H
Sbjct: 1115 GFAVCSVLEHVPD-------------RIVCHLSPDTLDYGELRDFGHDFHCKGSDVSSEH 1161

Query: 950  LWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLE----VKMCGLHPVYMDE 1005
            +WL Y   Q C  +R+  + N +P E +H+ +SFE            VK CG+  +Y ++
Sbjct: 1162 VWLGY---QPCAQLRM-FQVN-DPNEWSHMEISFEATHRLSSRASNMVKECGVRLIYAED 1216

Query: 1006 VEEL 1009
            +E +
Sbjct: 1217 LESI 1220


>gi|359489175|ref|XP_002264704.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1254

 Score =  600 bits (1547), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 375/937 (40%), Positives = 547/937 (58%), Gaps = 96/937 (10%)

Query: 18   DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS-KGGLVSLQRQLLSQL 76
            DVRMIGI G+GG+GKTTIA++VY+ +   F+ S FL++V+E S    G + L ++ L   
Sbjct: 221  DVRMIGIYGIGGIGKTTIAKMVYNDVLCHFKGSSFLEDVKERSKCHHGRLQLLQEFLHGT 280

Query: 77   LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITS 136
            L + D  + N+ +GI+M+ +RL RK++LL++DDV  + QL+ L G+ EWFG GSRIIIT+
Sbjct: 281  LMVKDLKLSNIDEGINMIKNRLCRKRILLILDDVDHLDQLKLLVGSCEWFGPGSRIIITT 340

Query: 137  RDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLA 196
            RD+HLL  H VD VY+   L++ EA+QLF+  AFK   P +    LS  +I YA GLPLA
Sbjct: 341  RDKHLLNVHRVDAVYEVKELDHKEAIQLFSRHAFKQNIPPKNYEDLSNCVINYAKGLPLA 400

Query: 197  LEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGN 256
            L+VLGSFL G ++D+W+S L++L+ +P  EI ++L+ISFDGL   EK+IFLDIACFFKG 
Sbjct: 401  LKVLGSFLYGMTIDQWKSALDKLKGKPNMEIHNVLRISFDGLDHTEKQIFLDIACFFKGE 460

Query: 257  DRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGK 316
            D+D+++  L+GC F   IG+++L ++CLIT+ N+ + MHDL+Q++GQ+IV+ + P++  K
Sbjct: 461  DKDFISRILDGCNFFANIGLKILCDRCLITISNSKIHMHDLIQQMGQEIVREKYPDDPNK 520

Query: 317  RSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI--- 373
             SRLW  +++        G + +E I LD +    E+ L  S K FS+M  LRLLK+   
Sbjct: 521  WSRLWDPDDIYRAFLRKEGMKKIEAISLD-FSRLKEIQL--STKVFSRMKKLRLLKVYWS 577

Query: 374  ---------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGEL 424
                       + +P   E  S+ LR L W GY L  LPSN   +  +E+ + YS I  L
Sbjct: 578  DHSSFTKKESKVFIPKDFEIPSHELRYLYWEGYSLNCLPSNFHGENLVELELRYSTIKRL 637

Query: 425  WKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIIL 484
            WKG K L+KLK + LSHSE L ++  F+G PNLE+L LEGCT L ++H SL +  KL  L
Sbjct: 638  WKGSKGLEKLKFINLSHSEKLTKISKFSGMPNLERLNLEGCTSLRKVHSSLGVLKKLTSL 697

Query: 485  NMKDCTSLITLPGKILMKSLEKLNL-----------------------------KSLPTT 515
             +KDC  L + P  I ++SLE L++                             K LPT+
Sbjct: 698  QLKDCQKLESFPSSIELESLEVLDISGCSNFEKFPEIHGNMRHLRKIYLNQSGIKELPTS 757

Query: 516  ISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLK 575
            I  L+ L  L ++    F +FPEI   M+ L  L L GTAI+ LP SI  L+GL  L+L 
Sbjct: 758  IEFLESLEMLQLANCSNFEKFPEIQRDMKSLHWLVLGGTAIKELPSSIYHLTGLRELSLY 817

Query: 576  NCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIE 635
             C++L  LP ++  L+ L  + L GCS L+ FP+I++ M+++  L L GTS+KE+P SIE
Sbjct: 818  RCKNLRRLPSSICRLEFLHGIYLHGCSNLEAFPDIIKDMENIGRLELMGTSLKELPPSIE 877

Query: 636  LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
             L  LE L+L++C+NLV LPSSI  ++SL+ L L  C KL+ +P                
Sbjct: 878  HLKGLEELDLTNCENLVTLPSSICNIRSLERLVLQNCSKLQELP---------------- 921

Query: 696  TAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSL 755
                              +  + L+   + GLCSL  LNL+ CNLM GA+PSD+  L SL
Sbjct: 922  ------------------KNPMTLQCSDMIGLCSLMDLNLSGCNLMGGAIPSDLWCLSSL 963

Query: 756  KELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLD 815
            + L LS ++   +P+ I+ L  L   +L  CK L+S+ +LP ++R +  + C  L TL  
Sbjct: 964  RRLNLSGSNIRCIPSGISQLRIL---QLNHCKMLESITELPSSLRVLDAHDCTRLDTLSS 1020

Query: 816  ALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSE-IPEWFM 874
                     ++ +C  S         A   L   +E  S+    +++V+PGS  IPEW  
Sbjct: 1021 LSS--LLQCSLFSCFKS---------AIQELEHGIE--SSKSIGINIVIPGSRGIPEWIS 1067

Query: 875  YQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS 911
             Q  GS +TV  P N       +G+A+C ++  L ++
Sbjct: 1068 NQELGSEVTVELPMNWCEDNDFLGFALCSLYVPLDDA 1104


>gi|359495285|ref|XP_002276740.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1557

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 405/1060 (38%), Positives = 596/1060 (56%), Gaps = 152/1060 (14%)

Query: 1    MDSRCEKLR----FLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV 56
            MD R E++      ++D  S+DVRM+GI G GG+GKTT+A+V+Y+ I  +F  + F+ NV
Sbjct: 398  MDYRLEEMEEIFPQIIDPLSNDVRMVGIYGFGGIGKTTMAKVLYNRIGAQFMIASFIANV 457

Query: 57   REISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQL 116
            RE S   GL+ LQ+QLL  +L    N I NV +G+ M+  RL  KKVLLV+DDV D+ QL
Sbjct: 458  REDSKSRGLLYLQKQLLHDILPRRKNFIRNVDEGVHMIKDRLCFKKVLLVLDDVDDLNQL 517

Query: 117  QSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
            ++LAG+  WFG GSRII+T+RD+HLL+ HG+D +Y+   L++ EA++LF   AFK   P 
Sbjct: 518  EALAGDHSWFGPGSRIIVTTRDKHLLELHGMDALYEAKKLDHKEAIELFCWNAFKQNHPK 577

Query: 177  QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
            ++   LS  ++ Y  GLPL L++LG FL G++V +W S L++L+ EP  EI  +L+ S+D
Sbjct: 578  EDYETLSNSVVHYVNGLPLGLKILGCFLYGKTVRQWESELQKLQREPNQEIQRVLKRSYD 637

Query: 237  GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
             L + +++IFLDIACFF G ++D+VT  L+ C F+   GI VL +KC +T+ +N +WMHD
Sbjct: 638  ELDDTQQQIFLDIACFFNGEEKDFVTRILDACNFYAESGIGVLGDKCFVTILDNKIWMHD 697

Query: 297  LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
            LLQ++G++IV+++ P + GK SRL   E V  VLT   GT+ +EGI+L N      +++ 
Sbjct: 698  LLQQMGREIVRQECPRDPGKWSRLCYPEVVNRVLTRKMGTKAIEGILL-NLSRLTRIHI- 755

Query: 357  ASAKAFSKMTNLRLLKI------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
             + +AF+ M NLRLLKI              ++L    E+ S+ LR L W GYPL+ LP 
Sbjct: 756  -TTEAFAMMKNLRLLKIHWDLESASTREDNKVKLSKDFEFPSHELRYLHWHGYPLESLPL 814

Query: 405  NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFT-GAPNLEKLILE 463
                +  +E+ MCYS +  LW+G   L+KL  + +S S++LI +PD T  APNLEKLIL+
Sbjct: 815  GFYAEDLVELDMCYSSLKRLWEGDLLLEKLNTIRVSCSQHLIEIPDITVSAPNLEKLILD 874

Query: 464  GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLS 523
            GC+ L E+HPS+   NKLI+LN+K+C  LI  P  I MK+LE LN     +  SGLK   
Sbjct: 875  GCSSLLEVHPSIGKLNKLILLNLKNCKKLICFPSIIDMKALEILNF----SGCSGLK--- 927

Query: 524  TLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEIL 583
                       +FP I  +ME+L EL+L  TAI  LP SI  L+GLVLL+LK C++L+ L
Sbjct: 928  -----------KFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSL 976

Query: 584  PVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELL 643
            P ++  LK L +L LSGCS+L+ FPE+  +M +L EL LDGT I+ +PSSIE L  L LL
Sbjct: 977  PTSICKLKSLENLSLSGCSQLESFPEVTENMDNLKELLLDGTPIEVLPSSIERLKGLVLL 1036

Query: 644  NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTS 703
            NL  CKNL+ L + I     L+            +P +     SL  LDIS   +     
Sbjct: 1037 NLRKCKNLLSLSNGISNGIGLR------------LPSSFSSFRSLSNLDISDCKLIEGA- 1083

Query: 704  WYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKN 763
                IP              +  L SL+KL+L+  N +  ++P+ I  L +LK+L L++ 
Sbjct: 1084 ----IP------------NGICSLISLKKLDLSRNNFL--SIPAGISELTNLKDLRLAQ- 1124

Query: 764  SFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL------VTLLDAL 817
                                  C+ L  +P+LPP++R +  + C SL      V+ L  L
Sbjct: 1125 ----------------------CQSLTGIPELPPSVRDIDAHNCTSLLPGSSSVSTLQGL 1162

Query: 818  KLC----------------KSDSTMIACLDSLKLLGNKSLAFS--MLREYLEAVSNTRQH 859
            +                  +++  +   +       + S+  S  M+++ LE ++     
Sbjct: 1163 QFLFYNCSKPVEDQSSDDKRTELQIFPHIYVSSTASDSSVTTSPVMMQKLLENIA----- 1217

Query: 860  LSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGS 919
             S+V PG+ IPEW  +QN GSSI +  P+N Y+    +G+A+C V   L           
Sbjct: 1218 FSIVFPGTGIPEWIWHQNVGSSIKIQLPTNWYS-DDFLGFALCSVLEHL----------- 1265

Query: 920  YPTHQLNCHIGHGIYGIGFRDKFGQ--------AGSDHLWLLYLSRQTCYDIRLPLESNL 971
                ++ CH+   ++  G    FG          GS+H+WL Y   Q C  +RL  + N 
Sbjct: 1266 --PERIICHLNSDVFNYGDLKDFGHDFHWTGNIVGSEHVWLGY---QPCSQLRL-FQFN- 1318

Query: 972  EPFESNHVNVSFEPW----LGQGLEVKMCGLHPVYMDEVE 1007
            +P E NH+ +SFE            VK CG+  +Y +++E
Sbjct: 1319 DPNEWNHIEISFEAAHRFNSSASNVVKKCGVCLIYAEDLE 1358


>gi|37781280|gb|AAP44392.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1136

 Score =  593 bits (1528), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 375/908 (41%), Positives = 524/908 (57%), Gaps = 78/908 (8%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M+S   K+  ++  GS  V  +GI GM G+GKTT+ARV+YD I  +F+ + FL  VR+ S
Sbjct: 198  MESHMLKVYKMLGIGSGGVHFLGILGMSGVGKTTLARVIYDNIRSQFQGACFLHEVRDRS 257

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            +K GL  LQ  LLS++L +    I N F+G +M   RLQ KKVLLV+DDV  + QL +LA
Sbjct: 258  AKQGLERLQEILLSEILVVKKLRINNSFEGANMQKQRLQYKKVLLVLDDVDHIDQLNALA 317

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            G REWFG GSRIIIT++D+HLL  +  +++Y+   LN  E+LQLF   AFK  +P +E  
Sbjct: 318  GEREWFGDGSRIIITTKDKHLLVKYETEKIYRMKTLNNYESLQLFKQHAFKKNRPTKEFE 377

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
             LSA++I++  GLPLAL+VLGSFL GR +DEW S +ERL+  P +EIL  L+ SF GL  
Sbjct: 378  DLSAQVIKHTDGLPLALKVLGSFLYGRGLDEWISEVERLKQIPENEILKKLEQSFTGLHN 437

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             E+KIFLDIACFF G  +D VT  LE   F PVIGI+VL+EKCLIT+    + +H L+Q+
Sbjct: 438  TEQKIFLDIACFFSGKKKDSVTRILESFHFCPVIGIKVLMEKCLITILQGRITIHQLIQD 497

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G  IV+R++ ++    SRLWK E++C VL  + GT+  EG+ L   H  NE  +    K
Sbjct: 498  MGWHIVRREATDDPRMCSRLWKREDICPVLERNLGTDKNEGMSL---HLTNEEEVNFGGK 554

Query: 361  AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
            AF +MT LR LK  N  +  G E+L + LR L W GYP K LP++ + D+ + + +  SR
Sbjct: 555  AFMQMTRLRFLKFRNAYVCQGPEFLPDELRWLDWHGYPSKSLPNSFKGDQLVGLKLKKSR 614

Query: 421  IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
            I +LWK  K L KLK M LSHS+ LIR PDF+  PNLE+L+LE CT L EI+ S+    K
Sbjct: 615  IIQLWKTSKDLGKLKYMNLSHSQKLIRTPDFSVTPNLERLVLEECTSLVEINFSIENLGK 674

Query: 481  LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
            L++LN+K+C +L TLP +I ++ LE L L                  +G  K R FPEI 
Sbjct: 675  LVLLNLKNCRNLKTLPKRIRLEKLEILVL------------------TGCSKLRTFPEIE 716

Query: 541  EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
            E M  L+EL+L  T++ GLP S+E LSG+ ++NL  C+ LE LP ++  LKCL++L +SG
Sbjct: 717  EKMNCLAELYLGATSLSGLPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSG 776

Query: 601  CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
            CSKLK  P+ +  +  L +L    T+I  +PSS+ LL  L+ L+L  C  L    SS   
Sbjct: 777  CSKLKNLPDDLGLLVGLEKLHCTHTAIHTIPSSMSLLKNLKRLSLRGCNALSSQVSSSSH 836

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK 720
             +    +N           + L  + SL  LD+S   +                 S    
Sbjct: 837  GQKSMGVNF----------QNLSGLCSLIRLDLSDCDI-----------------SDGGI 869

Query: 721  LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLN 780
            L +L  L SL+ L L D N       + I  L  LK L                      
Sbjct: 870  LRNLGFLSSLKVL-LLDGNNFSNIPAASISRLTRLKSL---------------------- 906

Query: 781  IELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCK-SDSTMIACLDSLKLLGNK 839
              L  C RL+SLP+LPP+I  +  + C SL+++    K    SD +   C   +K   + 
Sbjct: 907  -ALRGCGRLESLPELPPSITGIYAHDCTSLMSIDQLTKYPMLSDVSFRNCHQLVKNKQHT 965

Query: 840  SLAFSMLREYLEAVS-NTRQHLSVVVPGSEIPEWFMYQNEGS-SITVTRPSNLYNKKKLV 897
            S+  S+L++ LEA+  N R    + VPG EIPEWF Y++ G+ S++V  P+N +      
Sbjct: 966  SMVDSLLKQMLEALYMNVR--FGLYVPGMEIPEWFTYKSWGTQSMSVVLPTNWFT-PTFR 1022

Query: 898  GYAICCVF 905
            G+ +C +F
Sbjct: 1023 GFTVCVLF 1030


>gi|147821215|emb|CAN66453.1| hypothetical protein VITISV_004613 [Vitis vinifera]
          Length = 1441

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 404/1081 (37%), Positives = 586/1081 (54%), Gaps = 171/1081 (15%)

Query: 1    MDSRCEKLR----FLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV 56
            MD R E +      ++D  S++V M+GI G GG+GKTT+A+V+Y+ I  +F  + F+ NV
Sbjct: 400  MDYRLEDMEEIFPQIIDPLSNNVXMVGIYGFGGIGKTTMAKVLYNRIGAQFMITSFIANV 459

Query: 57   REISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQL 116
            RE S   GL+ LQ+QLL  +L    N I NV +GI M+  RL  KKVLLV+DDV D+ QL
Sbjct: 460  REDSKSRGLLYLQKQLLHDILPKRKNFIRNVDEGIHMIKDRLCFKKVLLVLDDVDDLNQL 519

Query: 117  QSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
            ++LAG+  WFG GSRII+T+RD+HLL+ H +D +Y+   L++ EA++LF   AFK   P 
Sbjct: 520  EALAGDHNWFGPGSRIIVTTRDKHLLEVHEMDALYEAKKLDHKEAVELFCWNAFKQNHPK 579

Query: 177  QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
            ++   LS  ++ Y  GLPL L+                       EP  EI  +L+ S+D
Sbjct: 580  EDYKTLSNSVVHYVNGLPLGLKR----------------------EPNQEIQRVLKRSYD 617

Query: 237  GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
             L   ++ IFLD+ACFF G D+D+VT  L+ C F+   GI VL +KC IT+ +N +WMHD
Sbjct: 618  VLDYTQQXIFLDVACFFNGEDKDFVTRILDACNFYAXSGIGVLGDKCFITILDNKIWMHD 677

Query: 297  LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
            LLQ++G+ IV+++ P++ GK SRL   E V  VLT                       + 
Sbjct: 678  LLQQMGRDIVRQECPKDPGKWSRLCYPEVVNRVLTRK---------------------MW 716

Query: 357  ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
                AF +  N        ++L    E+ S  LR L W GYPL+ LP     +  +E+ M
Sbjct: 717  DLEXAFMREDN-------KVKLSKDFEFPSYELRYLHWHGYPLESLPLGFYAEDLVELDM 769

Query: 417  CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDF-TGAPNLEKLILEGCTRLYEIHPSL 475
            CYS +  LW+G   L+KL  + +S S++LI +PD    APNLEKLIL+GC+ L E+HPS+
Sbjct: 770  CYSSLKRLWEGDLLLEKLNTIRVSCSQHLIEIPDIIVSAPNLEKLILDGCSSLLEVHPSI 829

Query: 476  LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
               NKL +LN+K+C  LI  P  I MK+LE LN  S     SGLK              +
Sbjct: 830  GKLNKLFLLNLKNCKKLICFPSIIDMKALEILNFSS----CSGLK--------------K 871

Query: 536  FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
            FP I  +ME+L EL+L  TAI  LP SI  L+GLVLL+LK C++L+ LP ++  LK L +
Sbjct: 872  FPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLEN 931

Query: 596  LKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
            L LSGCSKL+ FPE+  +M +L EL LDGT I+ +PSSIE L  L LLNL  CKNLV L 
Sbjct: 932  LSLSGCSKLESFPEVTENMDNLKELLLDGTPIEVLPSSIERLKGLILLNLRKCKNLVSLS 991

Query: 656  SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRK 715
            + +  L SL+TL +SGC +L N+P  LG ++ L +L   GTA+           I L+R 
Sbjct: 992  NGMCNLTSLETLIVSGCSQLNNLPRNLGSLQCLAQLHADGTAIAQPPD-----SIVLLRN 1046

Query: 716  SVALKLP--------SLSGLCSL-------------------------RKLNLTDCNLME 742
               L  P        SL  L S                            L+++DC L+E
Sbjct: 1047 LQVLIYPGCKILAPNSLGSLFSFWLLHGNSPNGIGLRLPSSFSSFRSLSNLDISDCKLIE 1106

Query: 743  GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
            GA+P+ I +L SLK+L LS+N+F+S+P  I+ L+ L ++ L  C+ L  +P+LPP++R +
Sbjct: 1107 GAIPNGICSLISLKKLDLSRNNFLSIPAGISELTNLKDLRLGQCQSLTGIPELPPSVRDI 1166

Query: 803  RVNGCASL------VTLLDALKLC----------------KSDSTMIACLDSLKLLGNKS 840
              + C +L      V+ L  L+                  +++  +   +       + S
Sbjct: 1167 DAHNCTALLPGSSSVSTLQGLQFLFYNCSKPVEDQSSDDKRTELQIFPHIYVSSTASDSS 1226

Query: 841  LAFS--MLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVG 898
            +  S  M+++ LE ++      S+V PG+ IP+W  +QN GSSI +  P++ Y+    +G
Sbjct: 1227 VTTSPVMMQKLLENIA-----FSIVFPGTGIPDWIWHQNVGSSIKIQLPTDWYS-DDFLG 1280

Query: 899  YAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQ--------AGSDHL 950
            +A+C V   L               ++ CH+   ++  G    FG          GS+H+
Sbjct: 1281 FALCSVLEHL-------------PERIICHLNSDVFDYGDLKDFGHDFHWTGNIVGSEHV 1327

Query: 951  WLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPW----LGQGLEVKMCGLHPVYMDEV 1006
            WL Y   Q C  +RL  + N +P E NH+ +SFE            VK CG+  +Y +++
Sbjct: 1328 WLGY---QPCSQLRL-FQFN-DPNEWNHIEISFEAAHRFNSSASNVVKKCGVCLIYAEDL 1382

Query: 1007 E 1007
            E
Sbjct: 1383 E 1383


>gi|224120770|ref|XP_002330947.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222873141|gb|EEF10272.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1120

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 388/984 (39%), Positives = 553/984 (56%), Gaps = 134/984 (13%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVREI-SSKGGLVSLQRQLLSQLLKLADNSIWNVFDG 90
           KTT+ARV+YD I  +FE S FL NVRE+ + K G   LQ QLLS++L +   S+W+ + G
Sbjct: 70  KTTVARVLYDRIRWQFEGSCFLANVREVFAEKDGPRRLQEQLLSEIL-MERASVWDSYRG 128

Query: 91  IDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEV 150
           I+M+  RL+ KK+LL++DDV D KQL+ LA    WFG GSRIIITSRD +++  +   ++
Sbjct: 129 IEMIKRRLRLKKILLILDDVDDKKQLEFLAEEPGWFGPGSRIIITSRDTNVITGNDDTKI 188

Query: 151 YKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVD 210
           Y+   LN D+AL LF+ KAFK  QP ++ V+LS +++ YA GLPLALEV+GSFL GRS+ 
Sbjct: 189 YEAEKLNDDDALMLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFLYGRSIP 248

Query: 211 EWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGF 270
           EWR  + R+   P  +I+D+L+ISFDGL E +KKIFLDIACF KG  +D +   L+ CGF
Sbjct: 249 EWRGAINRMNEIPDCKIIDVLRISFDGLHESDKKIFLDIACFLKGFKKDRIIRILDSCGF 308

Query: 271 HPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVL 330
           H  IG +VLIEK LI+V  + +WMH+LLQ +G++IV+ +SPEE G+RSRLW  E+VC  L
Sbjct: 309 HAHIGTQVLIEKSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYEDVCLAL 368

Query: 331 TESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLR 390
            ++TG E +E I LD    +   +   + +AFSKM+ LRLLKI N+QL  G E LSN+L+
Sbjct: 369 MDNTGKEKIEAIFLDMPGIKESQW---NIEAFSKMSRLRLLKINNVQLSEGPEDLSNKLQ 425

Query: 391 LLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD 450
            L W  YP K LP  LQ+D+ +E++M  S + +LW G K    LK++ LS+S  L + PD
Sbjct: 426 FLEWHSYPSKSLPVGLQVDQLVELHMANSNLEQLWYGCKSAVNLKIINLSNSLYLTKTPD 485

Query: 451 FTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK 510
            TG PNLE LILEGCT L E+HPSL  H KL  +N+ +C S+  LP  + M SL+     
Sbjct: 486 LTGIPNLESLILEGCTSLSEVHPSLAHHKKLQYMNLVNCKSIRILPNNLEMGSLK----- 540

Query: 511 SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLV 570
                      +  LD  G  K  +FP+IV +M+ L  L L+GT I  L  S+  L GL 
Sbjct: 541 -----------VCILD--GCSKLEKFPDIVGNMKCLMVLRLDGTGITKLSSSMHHLIGLG 587

Query: 571 LLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEV 630
           LL++ +C++LE +P ++  LK L+ L LSGCS+LK  PE +  ++ L E  + GTSI+++
Sbjct: 588 LLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESLEEFDVSGTSIRQL 647

Query: 631 PSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEE 690
           P+SI LL  L++L+L   K +V +P S+  L SL+ L L  C                  
Sbjct: 648 PASIFLLKNLKVLSLDGFKRIV-MPPSLSGLCSLEVLGLCAC------------------ 688

Query: 691 LDISGTAVPHSTSWYSYIPINLMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDI 749
            ++   A+P      S +    + ++  + LP S++ L  L  L L DC ++E       
Sbjct: 689 -NLREGALPEDIGCLSSLRSLDLSQNNFVSLPKSINQLFELEMLVLEDCTMLE------- 740

Query: 750 GNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCAS 809
                            SLP                        ++P  ++ V +NGC S
Sbjct: 741 -----------------SLP------------------------KVPSKVQTVCLNGCIS 759

Query: 810 LVTLLDALKLCKSDSTMIACLDSLKL---LGNKSLAFSMLREYLEAVSNTRQHLSVVVPG 866
           L T+ D + L  S  +   CL+  +L    G  S+  ++L  Y + +SN R    + +PG
Sbjct: 760 LKTIPDPINLSSSKISEFVCLNCWELYNHYGQDSMGLTLLERYFQGLSNPRPGFGIAIPG 819

Query: 867 SEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF-----------HVLKNSRGNN 915
           +EIP WF +Q++GSSI+V  PS        +G+  C  F           H   N R N 
Sbjct: 820 NEIPGWFNHQSKGSSISVQVPS------WSMGFVACVAFGVNGESPSLFCHFKANGREN- 872

Query: 916 CFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFE 975
               YP+  + C   + I          Q  SDH+WL YLS    +D    L+       
Sbjct: 873 ----YPSSPM-CISCNSI----------QVLSDHIWLFYLS----FDYLKELQEWQHGSF 913

Query: 976 SNHVNVSFEPWLGQGLEVKMCGLH 999
           SN + +SF      G++VK CG+ 
Sbjct: 914 SN-IELSFHS-SQPGVKVKNCGVR 935


>gi|37781360|gb|AAP44394.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 980

 Score =  590 bits (1522), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 370/901 (41%), Positives = 523/901 (58%), Gaps = 78/901 (8%)

Query: 11  LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQR 70
           ++  GS  VR +GI GM G+GKTT+ARV+YD I  +F+ + FL  VR+ S+K GL  LQ 
Sbjct: 42  MLGVGSGGVRFLGILGMSGVGKTTLARVIYDNIRSQFQGTCFLHEVRDRSAKQGLERLQE 101

Query: 71  QLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGS 130
            LLS++L +    I ++F+G +M   RL+ KKVLLV+DDV  + QL +LAG REWFG GS
Sbjct: 102 ILLSEILVVKKLRINDLFEGANMQKQRLRYKKVLLVLDDVDHIDQLDTLAGEREWFGDGS 161

Query: 131 RIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYA 190
           RIIIT++D+HLL  +  +++Y+   L+  E+LQLF   AFK   P +E   LSA++I + 
Sbjct: 162 RIIITTKDKHLLVKYETEKIYRMGTLDKYESLQLFKQHAFKKNHPTKEFEDLSAQVIEHT 221

Query: 191 GGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIA 250
           GGLP+AL+VLGSFL GR +DEW S +ERL+  P +EIL  L+ SF GL  +E+KIFLDIA
Sbjct: 222 GGLPVALKVLGSFLYGRGLDEWLSEVERLKQIPQNEILKKLEPSFIGLNNIEQKIFLDIA 281

Query: 251 CFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQS 310
           CFF G  +D VT  LE   F PVIGI+VL+EKCLIT+    + +H L+Q++G  IV+R++
Sbjct: 282 CFFSGKKKDSVTRILESFHFSPVIGIKVLMEKCLITILQGRIAIHQLIQDMGWHIVRREA 341

Query: 311 PEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRL 370
                  SRLWK E++C VL  +  T+ +EGI L   H  NE  +    KAF +MT+LR 
Sbjct: 342 SYNPRICSRLWKREDICPVLERNLATDKIEGISL---HLTNEEEVNFGGKAFMQMTSLRF 398

Query: 371 LKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKH 430
           LK  N  +  G E+L + LR L W GYP K LP++ + D+ + + +  SRI +LWK  K 
Sbjct: 399 LKFRNAYVCQGPEFLPDELRWLDWHGYPSKSLPNSFKGDQLVSLTLKKSRIIQLWKTSKD 458

Query: 431 LDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCT 490
           L KLK M LSHS+ LIR PDF+  PNLE+L+LE C  L EI+ S+    KL++LN+K+C 
Sbjct: 459 LGKLKYMNLSHSQKLIRTPDFSVMPNLERLVLEECKSLVEINFSIGDLGKLVLLNLKNCR 518

Query: 491 SLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELH 550
           +L TLP +I ++ LE L L                  SG  K R FPEI E M  L+EL+
Sbjct: 519 NLKTLPKRIRLEKLEILVL------------------SGCSKLRTFPEIEEKMNCLAELY 560

Query: 551 LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI 610
           L  TA+  L  S+E LSG+ ++NL  C+ LE LP ++  LKCL++L +SGCSKLK  P+ 
Sbjct: 561 LGATALSELSASVENLSGVGVINLCYCKHLESLPSSIFRLKCLKTLDVSGCSKLKNLPDD 620

Query: 611 VRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLS 670
           +  +  L E     T+I+ +PSSI LL  L+ L+L  C  L    SS    +    +N  
Sbjct: 621 LGLLVGLEEFHCTHTAIQTIPSSISLLKNLKHLSLRGCNALSSQVSSSSHGQKSVGVNF- 679

Query: 671 GCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSL 730
                    + L  + SL  LD+S   +         I  NL        LPSL+GL   
Sbjct: 680 ---------QNLSGLCSLIMLDLSDCNISDGG-----ILSNLGF------LPSLAGLI-- 717

Query: 731 RKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLP-TSITHLSKLLNIELEDCKRL 789
                                        L  N+F ++P  SI+ L++L  + L  C+RL
Sbjct: 718 -----------------------------LDGNNFSNIPAASISRLTRLEILALAGCRRL 748

Query: 790 QSLPQLPPNIRQVRVNGCASLVTLLDALKLCK-SDSTMIACLDSLKLLGNKSLAFSMLRE 848
           +SLP+LPP+I+++  + C SL+++    K     + +   C   +    + S+  S+L++
Sbjct: 749 ESLPELPPSIKEIYADECTSLMSIDQLTKYSMLHEVSFTKCHQLVTNKQHASMVDSLLKQ 808

Query: 849 YLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGS-SITVTRPSNLYNKKKLVGYAICCVFHV 907
             + +       S+ +PG EIPEWF Y+N G+ SI+V  P N Y      G AIC VF +
Sbjct: 809 MHKGLY-LNGSFSMYIPGVEIPEWFTYKNSGTESISVALPKNWYT-PTFRGIAICVVFDM 866

Query: 908 L 908
           +
Sbjct: 867 M 867


>gi|255544956|ref|XP_002513539.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223547447|gb|EEF48942.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1403

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 428/1156 (37%), Positives = 614/1156 (53%), Gaps = 167/1156 (14%)

Query: 1    MDSRCEKLRFLMD-SGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            +DSR E+++ L+D   +++V  +GI GMGG+GKTT A+ ++  IS+E EA+ F+ NVRE 
Sbjct: 199  IDSRVEQIQTLLDMEFTTNVLFVGIWGMGGIGKTTTAKALFTQISNELEAAYFVANVREE 258

Query: 60   SSKGGLVSLQRQLLSQLLK-----LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
            S K  +V L+ ++LS +L+     L   SI   F     + +RL+RK++L+V+DDV +V+
Sbjct: 259  SEKRTVVRLRDEILSNILEEENLHLGMRSILPRF-----ILNRLRRKRILIVLDDVSNVE 313

Query: 115  QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
            QL +LAG+  WFGSGSR+IITSRD+ +L  +  D +Y+  GLNY EALQL + K FK   
Sbjct: 314  QLTTLAGDHSWFGSGSRVIITSRDKQVL-VNAADRIYEVKGLNYCEALQLLSFKVFKQNH 372

Query: 175  PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
            P++  ++LS R++ Y  G+PLAL VL SFL  +  +EW STLE+LE     EI  +L+IS
Sbjct: 373  PVEGYIELSKRVVNYTKGVPLALNVLASFLYSKQREEWTSTLEKLEESSNLEIQKVLKIS 432

Query: 235  FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
            +D L+ ++K IFLDIACFFKG D DYVT  L+GC F P IGI  L++K LI + +N L M
Sbjct: 433  YDELEWVDKDIFLDIACFFKGADVDYVTTILDGCDFFPSIGISRLVDKSLIAIIDNKLDM 492

Query: 295  HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
            HDLLQE+GQ IVQ++S E  GK SRLW  E + HVLT + GT   EGI LD    E    
Sbjct: 493  HDLLQEMGQHIVQKESSENPGKNSRLWTPESIHHVLTGNRGTFATEGIFLDISKIEK--- 549

Query: 355  LCASAKAFSKMTNLRLLKI-----------------CNLQLPNGLEYLSNRLRLLGWRGY 397
            +  S+ AFSKM NLRLLK                    L   +GL+ L N+L  L W GY
Sbjct: 550  VDLSSVAFSKMWNLRLLKFYHNSFLSWKNPTGFVSESTLDSRDGLQSLPNKLCFLHWHGY 609

Query: 398  PLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNL 457
            P + LPSN  M+  +E+ M +S++ ELW G+KHL KLK++ L  SE L+ +PD + A NL
Sbjct: 610  PWESLPSNFSMENLVELNMPFSQVKELWTGVKHLQKLKLLDLHDSELLVTLPDLSSASNL 669

Query: 458  EKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL---------- 507
            EK+IL  CT L EI  S+    KL+ L++ +C  L +LP  I +K L+ L          
Sbjct: 670  EKIILNNCTSLLEIPSSIQCLRKLVCLSLSNCKELQSLPSLIPLKYLKTLNLSSCSNLKK 729

Query: 508  ----------------------------------------NLKSLPTTISGLKCLSTLDV 527
                                                    +LKSLP +I  L  L  LD+
Sbjct: 730  FPEISGEIEELHLDGTGLEEWPSSVQYLDKLRLLSLDHCEDLKSLPGSIH-LNSLDNLDL 788

Query: 528  SGDLKFREFPEIVEHMEHL--------------------SELHLEGTAIRGLPLSIELLS 567
            S     + FP++V ++++L                    ++L+L+ T I+ LP SI  LS
Sbjct: 789  SWCSSLKNFPDVVGNIKYLNVGHTAIEELPSSIGSLVSLTKLNLKDTEIKELPSSIGNLS 848

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSI 627
             LV LNLK   S++ LP ++  L  L  L ++    +++ P  +  +  L E  L+ +++
Sbjct: 849  SLVELNLKE-SSIKELPSSIGCLSSLVKLNIA-VVDIEELPSSLGQLSSLVEFNLEKSTL 906

Query: 628  KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
              +PSSI  LT L  LNL+    +  LP SI  L SL  LNLS C  L ++P ++G+++ 
Sbjct: 907  TALPSSIGCLTSLVKLNLA-VTEIKELPPSIGCLSSLVELNLSQCPMLGSLPFSIGELKC 965

Query: 688  LEELDISG----TAVPHSTSWYSYIPINLMRKSVAL-KLPSLSGLCSLRKLNLTDCNLME 742
            LE+L + G     ++P S      +    +     L KLPSLSG  SLR L L+   +++
Sbjct: 966  LEKLYLCGLRRLRSIPSSIRELKRLQDVYLNHCTKLSKLPSLSGCSSLRDLVLSYSGIVK 1025

Query: 743  GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
              +P  +G L SL+ L L  N+F+ +P +I  LS L  +++  CKRL++LP+LP  IR +
Sbjct: 1026 --VPGSLGYLSSLQVLLLKGNNFMRIPATIRQLSWLEVLDISYCKRLKALPELPQRIRVL 1083

Query: 803  RVNGCASLVTLLDALKLCKSDS----------TMIACLDSLK----------LLGNKSLA 842
              + C SL T+   L   +             T   C+   K          LL  + LA
Sbjct: 1084 VAHNCTSLKTVSSPLIQFQESQEQSPDDKYGFTFANCVSLEKNARSNIVESALLKTQHLA 1143

Query: 843  FSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
             ++L E L +         V  PGSEIPE F YQN G+S+T   PS  +N  KLVG+  C
Sbjct: 1144 TAVL-ELLTSYEEILVSPVVCFPGSEIPECFRYQNTGASVTTLLPSKWHN-NKLVGFTFC 1201

Query: 903  CVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYG--IGFRDK-FGQAG------SDHLWLL 953
             V   L+N    + F    T Q +C I +  YG  + F  K  G+ G      +DH   +
Sbjct: 1202 AVIE-LENRHYQDGF----TFQCDCRIENE-YGDSLEFTSKEIGEWGNQFEFETDH---V 1252

Query: 954  YLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWL------------GQGLEVKMCGLHPV 1001
            +L   +C  I +  E   E    N     FE                   +VK  G +PV
Sbjct: 1253 FLWNTSC--IYILTEERYEQLRKNSCTAIFEFACYTEDEYKVMLPGANSFKVKNSGFNPV 1310

Query: 1002 YMDEVEELDQTTNQPS 1017
            Y  + +E D + +Q S
Sbjct: 1311 YAKDEKEWDLSIDQTS 1326


>gi|224114331|ref|XP_002332400.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832723|gb|EEE71200.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1119

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 397/1043 (38%), Positives = 567/1043 (54%), Gaps = 167/1043 (16%)

Query: 32   KTTIARVVYDLISHEFEASGFLDNVREI-SSKGGLVSLQRQLLSQLLKLADNSIWNVFDG 90
            KTT+ARVVYD I  +FE S FL NVRE+ + K G   LQ QLLS++L +   S+W+   G
Sbjct: 70   KTTVARVVYDRIRWQFEGSCFLANVREVFAEKDGRRRLQEQLLSEIL-MERASVWDSSRG 128

Query: 91   IDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEV 150
            I+M+  RL+ KK+LL++DDV D +QL+ LA    WFG GSRIIITSRD+ ++  +  + +
Sbjct: 129  IEMIKRRLRLKKILLILDDVDDKEQLEFLAEEPGWFGPGSRIIITSRDKKVVTGNNNNRI 188

Query: 151  YKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVD 210
            Y+   LN D+AL LF+ KAFK   P ++ V+LS +++ YA GLPLALEV+GSFL  RS+ 
Sbjct: 189  YEAKKLNDDDALMLFSQKAFKNDHPTEDFVELSKQVVGYANGLPLALEVIGSFLYDRSIP 248

Query: 211  EWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGF 270
            EWR  + R+   P   I+D+L++SFDGL E +KKIFLDIACF KG   D +T  L+  GF
Sbjct: 249  EWRGAINRMNEIPDGRIIDVLRVSFDGLHESDKKIFLDIACFLKGFKIDRITRILQSRGF 308

Query: 271  HPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVL 330
            H  IGI VLIE+ LI+V  + +WMH+LLQ +G++IV+ +SPEE G+RSRLW  E+VC  L
Sbjct: 309  HAGIGIPVLIERSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYEDVCLAL 368

Query: 331  TESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLR 390
             ++TG E +E I  D    +   +   + KAFSKM+ LRLLKI N+QL  G E LSN+L 
Sbjct: 369  MDNTGKEKIEAIFFDMPGIKEAQW---NMKAFSKMSRLRLLKIDNVQLSEGPENLSNKLL 425

Query: 391  LLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD 450
             L W  YP K LP+ LQ+D+ +E++M  S + +LW G K    LKV+ LS+S +L + PD
Sbjct: 426  FLEWHSYPSKSLPAGLQVDELVELHMANSNLDQLWYGCKSAFNLKVINLSNSLHLTKTPD 485

Query: 451  FTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK 510
            FTG PNLE LILEGCT L E+HPSL  H KL  +N+ DC S+  LP  + M+SL+     
Sbjct: 486  FTGIPNLESLILEGCTSLSEVHPSLGYHKKLQYVNLMDCESVRILPSNLEMESLK----- 540

Query: 511  SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLV 570
                       +  LD  G  K  +FP+IV +M  L  L L+GT I  L  SI  L GL 
Sbjct: 541  -----------VCILD--GCSKLEKFPDIVGNMNCLMVLRLDGTGIEELSSSIHHLIGLE 587

Query: 571  LLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEV 630
            +L++K C++L+ +P ++  LK L+ L L GCS+ +  PE +  ++ L E  + GTSI++ 
Sbjct: 588  VLSMKTCKNLKSIPSSIGCLKSLKKLDLFGCSEFENIPENLGKVESLEEFDVSGTSIRQP 647

Query: 631  PSSIELLTKLELLNLSDCKNLV------RLPSSIIALKSLKTLNLSGCFKLENVPETLGQ 684
            P+SI LL  L++L+   CK +       RLP S+  L SL+ L+L  C            
Sbjct: 648  PASIFLLKNLKVLSFDGCKRIAESLTDQRLP-SLSGLCSLEVLDLCAC------------ 694

Query: 685  IESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEG 743
                   ++   A+P      S +    + ++  + LP S++ L  L  L L DC ++E 
Sbjct: 695  -------NLREGALPEDIGCLSSLKSLDLSRNNFVSLPRSINQLSGLEMLALEDCTMLE- 746

Query: 744  ALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR 803
                                                           SLP++P  ++ + 
Sbjct: 747  -----------------------------------------------SLPEVPSKVQTLN 759

Query: 804  VNGCASLVTLLDALKLCKSDSTMIACLDSLKLL---GNKSLAFSMLREYLEAVSNTRQHL 860
            +NGC  L  + D  +L  S  +   CL+  +L    G  S+  +ML  YLE +SN R   
Sbjct: 760  LNGCIRLKEIPDPTELSSSKRSEFICLNCWELYNHNGEDSMGLTMLERYLEGLSNPRPGF 819

Query: 861  SVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF-----------HVLK 909
             + +PG+EIP WF +Q+ GSSI+V  PS        +G+  C  F           H   
Sbjct: 820  GIAIPGNEIPGWFNHQSMGSSISVQVPS------WSMGFVACVAFSANGESPSLFCHFKA 873

Query: 910  NSRGNNCFGSYPTHQ-LNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLE 968
            N R N     YP+   ++C+             + Q  SDH+WL YLS     +++   E
Sbjct: 874  NGREN-----YPSPMCISCN-------------YIQVLSDHIWLFYLSFDHLKELK---E 912

Query: 969  SNLEPFESNHVNV-SFEPWLGQGLEVKMCG---LHPVYMDEVEELDQTTNQPSRFTVYNL 1024
               E + +  ++  SF+P    G++VK CG   L  VY+         T QPS       
Sbjct: 913  WKHESYSNIELSFHSFQP----GVKVKNCGVCLLSSVYI---------TPQPS------- 952

Query: 1025 NEFDQHFVGSKMIVATTSKRSLT 1047
                 HF+ +    A++ + SLT
Sbjct: 953  ---SAHFIVTSKEAASSFRASLT 972


>gi|37781226|gb|AAP44390.1| nematode resistance protein [Solanum tuberosum]
          Length = 1136

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 392/1019 (38%), Positives = 560/1019 (54%), Gaps = 138/1019 (13%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M+S   K+  ++  GS  V  +GI GM G+GKTT+ARV+YD I  +F+ + FL  VR+ S
Sbjct: 198  MESHMHKVYKMLGIGSGGVHFLGILGMSGVGKTTLARVIYDNIRSQFQGACFLHEVRDRS 257

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            +K GL  LQ  LLS++L +    I + F+G +M   RLQ KKVLLV+DDV  + QL +LA
Sbjct: 258  AKQGLERLQEILLSEILVVKKLRINDSFEGANMQKQRLQYKKVLLVLDDVDHIDQLNALA 317

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            G REWFG GSRIIIT++D+HLL  +  +++Y+   LN  E+LQLF   AFK  +P +E  
Sbjct: 318  GEREWFGDGSRIIITTKDKHLLVKYETEKIYRMKTLNNYESLQLFKQHAFKKNRPTKEFE 377

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
             LSA++I++  GLPLAL+VLGSFL GR +DEW S +ERL+  P +EIL  L+ SF GL  
Sbjct: 378  DLSAQVIKHTDGLPLALKVLGSFLYGRGLDEWISEVERLKQIPENEILKKLEQSFTGLHN 437

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             E+KIFLDIACFF G  +D VT  LE   F PVIGI+VL+EKCLIT+    + +H L+Q+
Sbjct: 438  TEQKIFLDIACFFSGKKKDSVTRILESFHFCPVIGIKVLMEKCLITILQGRITIHQLIQD 497

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G  IV+R++ ++    SR+WK E++C VL  + GT+  EG+ L   H  NE  +    K
Sbjct: 498  MGWHIVRREATDDPRMCSRMWKREDICPVLERNLGTDKNEGMSL---HLTNEEEVNFGGK 554

Query: 361  AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
            AF +MT LR LK  N  +  G E+L + LR L W GYP K LP++ + D+ + + +  SR
Sbjct: 555  AFMQMTRLRFLKFRNAYVCQGPEFLPDELRWLDWHGYPSKSLPNSFKGDQLVGLKLKKSR 614

Query: 421  IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
            I +LWK  K L KLK M LSHS+ LIR PDF+  PNLE+L+LE CT L EI+ S+    K
Sbjct: 615  IIQLWKTSKDLGKLKYMNLSHSQKLIRTPDFSVTPNLERLVLEECTSLVEINFSIENLGK 674

Query: 481  LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
            L++LN+K+C +L TLP +I ++ LE L L                  +G  K R FPEI 
Sbjct: 675  LVLLNLKNCRNLKTLPKRIRLEKLEILVL------------------TGCSKLRTFPEIE 716

Query: 541  EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
            E M  L+EL+L  T++  LP S+E LSG+ ++NL  C+ LE LP ++  LKCL++L +SG
Sbjct: 717  EKMNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSG 776

Query: 601  CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP----- 655
            CSKLK  P+ +  +  L EL    T+I+ +PSS+ LL  L+ L+LS C  L         
Sbjct: 777  CSKLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLSGCNALSSQVSSSSH 836

Query: 656  ---------SSIIALKSLKTLNLSGC-FKLENVPETLGQIESLEELDISGTAVPHSTSWY 705
                      ++  L SL  L+LS C      +   LG + SLE L ++G         +
Sbjct: 837  GQKSMGVNFQNLSGLCSLIMLDLSDCNISDGGILNNLGFLSSLEILILNGNN-------F 889

Query: 706  SYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSF 765
            S IP             S+S    L++L L  C                           
Sbjct: 890  SNIPA-----------ASISRFTRLKRLKLHGCG-------------------------- 912

Query: 766  VSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCK-SDS 824
                                  RL+SLP+LPP+I+ +  N C SL+++    K    SD+
Sbjct: 913  ----------------------RLESLPELPPSIKGIFANECTSLMSIDQLTKYPMLSDA 950

Query: 825  TMIACLDSLKLLGNKSLAFSMLREYLEAVS-NTRQHLSVVVPGSEIPEWFMYQNEGS-SI 882
            T   C   +K   + S+  S+L++ LEA+  N R    + VPG EIPEWF Y++ G+ S+
Sbjct: 951  TFRNCRQLVKNKQHTSMVDSLLKQMLEALYMNVR--FCLYVPGMEIPEWFTYKSWGTQSM 1008

Query: 883  TVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGI------ 936
            +V  P+N +      G+ +C    V+ + +     G + TH+        +YG+      
Sbjct: 1009 SVALPTNWFT-PTFRGFTVC----VILDKKMLFILGRFNTHK--------VYGLENMIWL 1055

Query: 937  ------GFRDK----FGQAGSDHLWLL--YLSRQTCYDIRLPLESNLEPFESNHVNVSF 983
                  G R K    FG  GS+    L   L     ++    LE++L+ + +N   + F
Sbjct: 1056 NLKRYDGLRQKISTSFGPIGSEKPGGLGDTLITHIAFERSWKLENDLDYYRNNAFQLEF 1114


>gi|357504435|ref|XP_003622506.1| TMV resistance protein N [Medicago truncatula]
 gi|355497521|gb|AES78724.1| TMV resistance protein N [Medicago truncatula]
          Length = 1137

 Score =  586 bits (1511), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 365/816 (44%), Positives = 497/816 (60%), Gaps = 67/816 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DSR +++  L+    ++VR IGI GMGG+GKTTIAR+VY+ I +EF+ S FL N+RE  
Sbjct: 202 IDSRIKEVYSLLAMDLNNVRFIGIWGMGGIGKTTIARLVYEAIKNEFKVSCFLANIRETV 261

Query: 61  SK-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           SK   L  +Q +LLS L  +  N  +NV DG  +L +    KKVLLV+DDV ++ QL++L
Sbjct: 262 SKTDNLAHIQMELLSHL-NIRSNDFYNVHDGKKILANSFNNKKVLLVLDDVSELSQLENL 320

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG +EWFG GSR+IITSRD+HLL THGV E YK  GL  +EAL+LF +KAFK  QP +E 
Sbjct: 321 AGKQEWFGPGSRVIITSRDKHLLMTHGVHETYKAKGLVKNEALKLFCLKAFKEIQPKEEY 380

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           + L   ++ Y  GLPLALEVLGS L GR+V+ W S LE++   P  +I D L+IS+D LQ
Sbjct: 381 LSLCKEVVEYTRGLPLALEVLGSHLHGRTVEVWHSALEQIRSGPHYKIHDTLKISYDSLQ 440

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH--NNTLWMHDL 297
            +EK +FLDIACFFKG D D V   LEGCG+HP IGI +LIE+ L T+   +N LWMHDL
Sbjct: 441 SMEKNLFLDIACFFKGMDIDEVIEILEGCGYHPKIGIDILIERSLATLDRGDNKLWMHDL 500

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           LQE+G+ IV  +SP + GKRSRLW +++V  VL ++ GT+ ++GI +D        +   
Sbjct: 501 LQEMGRNIVFEESPNDPGKRSRLWSQKDVDQVLRQNKGTDKIQGIAMDLVQPYEASW--- 557

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
             +AFSK++ LRLLK+C ++LP GL    + LR+L W G PL+ LP    + + + I + 
Sbjct: 558 KIEAFSKISQLRLLKLCEIKLPLGLNRFPSSLRVLDWSGCPLRTLPLTNHLVEIVAIKLY 617

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
            S+I +LW G + L+ LK + LS S++L R PDF G PNLE L+LEGCT L EIHPSLL 
Sbjct: 618 RSKIEQLWHGTQFLENLKSINLSFSKSLKRSPDFVGVPNLEFLVLEGCTSLTEIHPSLLS 677

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
           H KL +LN+KDC  L TLP KI M SL+ L+L                  SG  +F+  P
Sbjct: 678 HKKLALLNLKDCKRLKTLPCKIEMSSLKGLSL------------------SGCCEFKHLP 719

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
           E  E ME+LS+L LE TAI+ LP S+  L  L+ L+L+NC++L  LP TVS LK L  L 
Sbjct: 720 EFDETMENLSKLSLEETAIKKLPSSLGFLVSLLSLDLENCKNLVCLPNTVSELKSLLILN 779

Query: 598 LSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK-------- 649
           +SGCSKL  FPE ++ MK L ELF + TSI+E+PSS+  L  L++++ + CK        
Sbjct: 780 VSGCSKLHSFPEGLKEMKSLEELFANETSIEELPSSVFFLENLKVISFAGCKGPVTKSVN 839

Query: 650 ----------------NLVRLPSSIIALKSLKTLNLSGC-FKLENVPETLGQIESLEELD 692
                           N  RLP   + L SL+ LNLS C    E++P+    + SL  L+
Sbjct: 840 TFLLPFTQFLGTPQEPNGFRLPPK-LCLPSLRNLNLSYCNLSEESMPKDFSNLSSLVVLN 898

Query: 693 ISGTAVPHSTSWYSYIP----INLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSD 748
           +SG       S  S +P    + L    +  K P      S+R L+ ++C  +E +   +
Sbjct: 899 LSGNNFVRPPSSISKLPKLEYLRLNCCEMLQKFPEFPS--SMRLLDASNCASLETS-KFN 955

Query: 749 IGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELE 784
           +   CSL         F S     +HL +LL   +E
Sbjct: 956 LSRPCSL---------FASQIQRHSHLPRLLKSYVE 982



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 165/528 (31%), Positives = 263/528 (49%), Gaps = 63/528 (11%)

Query: 519  LKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNC 577
            L+ L ++++S     +  P+ V  + +L  L LEG T++  +  S+     L LLNLK+C
Sbjct: 631  LENLKSINLSFSKSLKRSPDFV-GVPNLEFLVLEGCTSLTEIHPSLLSHKKLALLNLKDC 689

Query: 578  RSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELL 637
            + L+ LP  +  +  L+ L LSGC + K  PE   +M++LS+L L+ T+IK++PSS+  L
Sbjct: 690  KRLKTLPCKI-EMSSLKGLSLSGCCEFKHLPEFDETMENLSKLSLEETAIKKLPSSLGFL 748

Query: 638  TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA 697
              L  L+L +CKNLV LP+++  LKSL  LN+SGC KL + PE L +++SLEEL  + T+
Sbjct: 749  VSLLSLDLENCKNLVCLPNTVSELKSLLILNVSGCSKLHSFPEGLKEMKSLEELFANETS 808

Query: 698  V---PHSTSWYSYIPI-------NLMRKSV------------------ALKLPSLSGLCS 729
            +   P S  +   + +         + KSV                    +LP    L S
Sbjct: 809  IEELPSSVFFLENLKVISFAGCKGPVTKSVNTFLLPFTQFLGTPQEPNGFRLPPKLCLPS 868

Query: 730  LRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRL 789
            LR LNL+ CNL E ++P D  NL SL  L LS N+FV  P+SI+ L KL  + L  C+ L
Sbjct: 869  LRNLNLSYCNLSEESMPKDFSNLSSLVVLNLSGNNFVRPPSSISKLPKLEYLRLNCCEML 928

Query: 790  QSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREY 849
            Q  P+ P ++R +  + CASL T      L +  S   + +     L        +L+ Y
Sbjct: 929  QKFPEFPSSMRLLDASNCASLET--SKFNLSRPCSLFASQIQRHSHLPR------LLKSY 980

Query: 850  LEAVSN--TRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHV 907
            +EA  +   +    +++ GSEIP WF      S   ++ P N     + +G+A+C  F +
Sbjct: 981  VEAQEHGLPKARFDMLITGSEIPSWFTPSKYVSVTNMSVPHNC-PPTEWMGFALC--FML 1037

Query: 908  LKNSRGNNCFGSYPT---HQLNCHI--GHGIYGIGFRD-KFGQAGSDHLWLLYLSRQTCY 961
            +        F   P    H+++C++    G   I  RD    +    HL++LYL+   C 
Sbjct: 1038 VS-------FAEPPELCHHEVSCYLFGPKGKLFIRSRDLPPMEPYVRHLYILYLTIDECR 1090

Query: 962  DIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEEL 1009
                  E   E  + + +    + +    L+V  CG   V+  +VE++
Sbjct: 1091 ------ERFDEGGDCSEIEFVLKTYCCDELQVVRCGCRLVFKQDVEDI 1132


>gi|296089409|emb|CBI39228.3| unnamed protein product [Vitis vinifera]
          Length = 1161

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 423/1187 (35%), Positives = 627/1187 (52%), Gaps = 163/1187 (13%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M+   ++L+ L+   S+DVRMIGI G+GG+GKTTIA+VVY+ ISH+FE+  FL+NVRE S
Sbjct: 16   MNFHLKELKSLIKIESNDVRMIGIYGLGGIGKTTIAKVVYNNISHQFESRIFLENVRERS 75

Query: 61   -SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
                 L+ LQ++LL+ + K     I N+ +G++++ +R   K+VLL++DDV   +QLQ L
Sbjct: 76   KDHSSLLQLQKELLNGVAKGKYLKISNIHEGVNVIRNRFLSKRVLLILDDVDKSEQLQFL 135

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
             G   WFG  SRIIITSRD+HLL+ + +D  Y+   L+Y+E++QLF + AFK     ++ 
Sbjct: 136  VGEHGWFGPRSRIIITSRDQHLLEEYEMDASYEVKVLDYEESMQLFCLHAFKQNILRKDY 195

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            V LS  ++ Y  GLPLALE+LGSFL  +S  EW STL++L+ +P   + ++L+ISFDGL 
Sbjct: 196  VDLSNDVVNYVNGLPLALEILGSFLFNKSKLEWESTLQKLKRKPNMNVQNVLKISFDGLD 255

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
            E+EK+IFLD+ACFFKG +   VT  L+    H  I IRVL +KCLIT+ +N +WMHDL+Q
Sbjct: 256  EIEKEIFLDVACFFKGWNETDVTRLLD----HANIVIRVLSDKCLITLSHNIIWMHDLVQ 311

Query: 300  ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
            E+G++IV++  P+E GK SRLW  E++C VL    GTE +EGI LD         +  + 
Sbjct: 312  EMGREIVRQNHPKEPGKWSRLWDPEDICLVLRRKMGTEAIEGIFLDMSRSRE---ISFTT 368

Query: 360  KAFSKMTNLRLLKIC--------------NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSN 405
            +AF +M  LRL K+                  LP   E  S+ LR L W GY LK LPSN
Sbjct: 369  EAFRRMERLRLFKVYWSHGFVNYMGKEYQKFLLPEDFEIPSHDLRYLHWEGYSLKSLPSN 428

Query: 406  LQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
               +  IE+ + +S I +LW+G K+L++LK++ LS S+ L  +P F+  PNLE+L +E C
Sbjct: 429  FHGENLIELNLKHSNIEQLWQGKKYLEELKMLTLSESQLLNEIPHFSNMPNLEQLNIELC 488

Query: 466  TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI-LMKSLEKL----------------- 507
             +L ++  S+ +  KL +LN++ C  + +LP  I  + SL++L                 
Sbjct: 489  EKLDKVDSSIGILKKLTLLNLRGCQKISSLPSTIQYLVSLKRLYLHSIAIDELPSSIHHL 548

Query: 508  ------------NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTA 555
                        NL+SLP++I  LK L  LD+ G      FPEI+E+ME L+EL+L GT 
Sbjct: 549  TQLQTLSIRGCENLRSLPSSICRLKSLEELDLYGCSNLGTFPEIMENMEWLTELNLSGTH 608

Query: 556  IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMK 615
            ++GLP SIE L+ L  L L+ C++L  LP ++  LK L  L L GCS L+ FPEI+  M+
Sbjct: 609  VKGLPSSIEYLNHLTRLELRCCKNLRSLPSSIWRLKSLEELDLFGCSNLETFPEIMEDME 668

Query: 616  DLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
             L EL L  T IKE+P SI  L  L  L L  C+NL  LPSSI  LKSL+ L+L  C  L
Sbjct: 669  CLMELNLSRTCIKELPPSIGYLNHLTFLGLQCCQNLRSLPSSICRLKSLEELDLYYCSNL 728

Query: 676  ENVPETLGQIESLEELDISGTAVPHSTSWYSYI-PINLMRKSVALKLPSL-SGLCSLR-- 731
            E  PE +  +E L +LD+SGT +    S   Y+  +  MR   +  L SL S +C L+  
Sbjct: 729  EIFPEIMENMECLIKLDLSGTHIKELPSSIEYLNHLTSMRLVESKNLRSLPSSICRLKFL 788

Query: 732  -KLNLTDCNLMEG----------------------------------------------A 744
             KLNL  C+ +E                                               +
Sbjct: 789  EKLNLYGCSHLETFPEIMEDMECLKKLDLSGTSIKKLPSSIGYLNHLTSFRLSYCTNLRS 848

Query: 745  LPSDIGNLCSL-------------KELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQS 791
            LPS IG L SL             ++L+LSKN+   +P+ I+ L  L  +++  CK L+ 
Sbjct: 849  LPSSIGGLKSLTKLSLSGRPNRVTEQLFLSKNNIHHIPSVISQLCNLECLDISHCKMLEE 908

Query: 792  LPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLE 851
            +P LP ++R++  +GC  L TL                          SL +S L ++ +
Sbjct: 909  IPDLPSSLREIDAHGCTGLGTLSSP----------------------SSLLWSSLLKWFK 946

Query: 852  AVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS 911
             V    +   + +  + IP W ++Q  GS I +  P N Y+    +G+   C++  + + 
Sbjct: 947  KVETPFEWGRINLGSNGIPRWVLHQEVGSQIRIELPMNCYHDDHFLGFGFFCLYEPVVDL 1006

Query: 912  RGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNL 971
              +  F      +   + G              + SD +W++Y  +    D    L+SN 
Sbjct: 1007 NLSLRFDEDLDEKAYAYKGASWCEC---HDINSSESDEVWVVYCPKIAIGD---KLQSN- 1059

Query: 972  EPFESNHVNVSFEPWLGQ-GLEVKMCGLHPVYMDEVEE-----LDQTTNQPSRFTVYNLN 1025
               +  H++ SF+  +      +K CG+H VY  + ++     LD    Q        + 
Sbjct: 1060 ---QYKHLHASFDACIIDCSKNIKSCGIHLVYSQDYQQNHISLLDFRGTQDDEDNHVPML 1116

Query: 1026 EFDQHFVGSKMIVATTSKRSLTEYFGAEASGSGCCDDEEPQPKRFRE 1072
             F ++   ++   A   KRS  +    +A        EEP  KR RE
Sbjct: 1117 NFPKNSADNRS-TAKDIKRSHDDAVHDQA--------EEPYHKRLRE 1154


>gi|225460354|ref|XP_002263146.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1174

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 330/685 (48%), Positives = 450/685 (65%), Gaps = 35/685 (5%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEF-EASGFLDNVREI 59
           M SR + +  L+D GS DVRM+GI GM G+GK+TIA  VY+ I  +F E   FL NVRE 
Sbjct: 200 MGSRLQDMAQLLDIGSVDVRMVGIWGMAGIGKSTIAYQVYNKIYAQFDEGYCFLPNVREE 259

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S + GL  LQ +LLSQ+     N   N   GI+ +  RL  +KVL+V+DDV   +QL+ L
Sbjct: 260 SQRHGLAYLQEELLSQISGGNLNK-GNFNRGINFIKERLHSRKVLIVLDDVDMYEQLEVL 318

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AGN +WFG+GSRIIIT++D+ LL  HGVD +Y   GL Y+EAL+LF   AFK   P  + 
Sbjct: 319 AGNHDWFGAGSRIIITTKDKTLLNMHGVDAIYNVEGLKYNEALKLFCWCAFKHDLPTADY 378

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           +QL    ++Y  GLPLA++VLGSF+  +++DEW+S L++L+  P  ++  +L+ISFDGL 
Sbjct: 379 MQLCKNFVKYIEGLPLAIKVLGSFVKNKTIDEWKSALDKLKRIPHKDVQKVLRISFDGLD 438

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           + +K IFLDIACFFKG D+D+V   LE C F P   IRVL E  LI V NN L MH+LLQ
Sbjct: 439 DNQKDIFLDIACFFKGQDKDFVAKILESCDFFPANDIRVLEENSLILVSNNKLCMHNLLQ 498

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G +IV++++ +  GKRSRLW  +EV HVLT +TGTE VEG+VLD      E++   SA
Sbjct: 499 EMGWEIVRQENVKYPGKRSRLWFHDEVNHVLTTNTGTEAVEGLVLD-LSASKELHF--SA 555

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
            AF++M  LR+L+  N+++   L++LSN LR L W  YPLK LPSN    K +E+ MC S
Sbjct: 556 GAFTEMNRLRVLRFYNVKMNGNLKFLSNNLRSLYWHEYPLKSLPSNFHPKKLVELNMCSS 615

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
           R+ +LWKG K  +KLK + LSHS+ L R PDF+GAPNLE+LILEGCT + ++HPS+    
Sbjct: 616 RLEQLWKGDKSFEKLKFIKLSHSQYLTRTPDFSGAPNLERLILEGCTSMVKVHPSIGALQ 675

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
           KLI LN++ C +L +    I M SL+ L L                  SG  K ++FPE+
Sbjct: 676 KLIFLNLEGCKNLKSFASSIHMNSLQILTL------------------SGCSKLKKFPEM 717

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
           +E+M+ L +L L+ TA+R LP SI  L+GLVLLNL NC+ L  LP ++  L  L+ L L+
Sbjct: 718 LENMKSLRQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQSLCKLTSLQILTLA 777

Query: 600 GCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK------NLVR 653
           GCS+LKK P+ + S++ L  L  DG+ I+EVP SI LLT L++L+L+ CK      +L  
Sbjct: 778 GCSELKKLPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQVLSLAGCKKRNVVFSLWS 837

Query: 654 LPS------SIIALKSLKTLNLSGC 672
            P+      S++ L S+KTL+LS C
Sbjct: 838 SPTVCLQLRSLLNLSSVKTLSLSDC 862



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 199/570 (34%), Positives = 303/570 (53%), Gaps = 74/570 (12%)

Query: 452  TGAPNLEKLILE--GCTRLYEIHPSLLLHNKLIIL---NMKDCTSLITLPGKILMKSLEK 506
            TG   +E L+L+      L+    +    N+L +L   N+K   +L  L   +      +
Sbjct: 533  TGTEAVEGLVLDLSASKELHFSAGAFTEMNRLRVLRFYNVKMNGNLKFLSNNLRSLYWHE 592

Query: 507  LNLKSLPTTISGLK------CLSTLD--VSGDLKFREFPEI-VEHMEHLSE--------- 548
              LKSLP+     K      C S L+    GD  F +   I + H ++L+          
Sbjct: 593  YPLKSLPSNFHPKKLVELNMCSSRLEQLWKGDKSFEKLKFIKLSHSQYLTRTPDFSGAPN 652

Query: 549  ---LHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKL 604
               L LEG T++  +  SI  L  L+ LNL+ C++L+    ++ ++  L+ L LSGCSKL
Sbjct: 653  LERLILEGCTSMVKVHPSIGALQKLIFLNLEGCKNLKSFASSI-HMNSLQILTLSGCSKL 711

Query: 605  KKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSL 664
            KKFPE++ +MK L +L LD T+++E+PSSI  L  L LLNL++CK LV LP S+  L SL
Sbjct: 712  KKFPEMLENMKSLRQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQSLCKLTSL 771

Query: 665  KTLNLSGCFKLENVPETLGQIESLEELDISGTA---VPHSTSWYSYIPI---------NL 712
            + L L+GC +L+ +P+ LG +  L  L+  G+    VP S +  + + +         N+
Sbjct: 772  QILTLAGCSELKKLPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQVLSLAGCKKRNV 831

Query: 713  M-----RKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS 767
            +       +V L+L SL  L S++ L+L+DCNL EGALPSD+ +L SL+ L LSKN+F++
Sbjct: 832  VFSLWSSPTVCLQLRSLLNLSSVKTLSLSDCNLSEGALPSDLSSLSSLESLDLSKNNFIT 891

Query: 768  LPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL-LDALKLCKSDSTM 826
            +P S+  LS+LL + L  CK LQS+P+LP  I++V  + C SL T  L A    K +   
Sbjct: 892  IPASLNRLSQLLYLSLSHCKSLQSVPELPSTIQKVYADHCPSLETFSLSACASRKLNQLN 951

Query: 827  IACLDSLKLLGNK------------SLAFSMLREYLEAVSNT---RQHLSVVVPGSEIPE 871
                D  +L+ N+             LA S + ++++A   +        V+VPGS IPE
Sbjct: 952  FTFSDCFRLVENEHSDTVGAILQGIQLA-SSIPKFVDANKGSPVPYNDFHVIVPGSSIPE 1010

Query: 872  WFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHV-------LKNS--RGNNCFGSYPT 922
            WF++QN GSS+TV  P + YN  KL+G A+C VFH        L+ S  RG + + SY  
Sbjct: 1011 WFIHQNMGSSVTVELPPHWYN-AKLMGLAVCAVFHADPIDWGYLQYSLYRGEHKYDSYML 1069

Query: 923  HQLNCHIGHGIYGIGFRDKFGQAGSDHLWL 952
               +   G  ++  G++   GQ   D +W 
Sbjct: 1070 QTWSPMKGDHVW-FGYQSLVGQE-DDRMWF 1097


>gi|224126507|ref|XP_002319855.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222858231|gb|EEE95778.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1741

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 375/920 (40%), Positives = 530/920 (57%), Gaps = 110/920 (11%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
            +DSR + L   +D  ++D   IGICGMGG+GKTT+ARV+YD I  +F+ S FL NVRE+ 
Sbjct: 680  IDSRLKVLNEYIDEQATDTLFIGICGMGGMGKTTVARVMYDRIRWQFQGSCFLANVREVF 739

Query: 60   SSKGGLVSLQRQLLSQL---LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQL 116
            + K G   LQ QLLS++   L  A +S       ID++  RL+ KKVLL++DDV D +QL
Sbjct: 740  AEKDGRCRLQEQLLSEISMELPTARDSSRR----IDLIKRRLRLKKVLLILDDVDDEEQL 795

Query: 117  QSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
            Q LA     FG GSRIIITSR++H+L +HGV  +Y+   LN  +AL LF+ KAFK  QP 
Sbjct: 796  QMLAAEHGSFGPGSRIIITSRNKHVLDSHGVTRIYEADKLNDKDALMLFSWKAFKRDQPA 855

Query: 177  QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
            ++  +LS +++ YA GLPLALEV+GSFL  R + EW+S ++R+   P  +I+D+L+ISFD
Sbjct: 856  EDLSELSKQVVGYANGLPLALEVIGSFLHKRGLREWKSAIDRMNDIPDRKIIDVLRISFD 915

Query: 237  GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
            GL ELEKKIFLDIACF KG  +D +   L+ CGFH  IG++ LIEK LI+V  + + MH+
Sbjct: 916  GLHELEKKIFLDIACFLKGMKKDRIARLLDSCGFHADIGMQALIEKSLISVSRDEIRMHN 975

Query: 297  LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
            LLQ++G++IV+ +SPEE G+RSRL   ++VC  L +S  TE ++ I LD    +   +  
Sbjct: 976  LLQKMGEEIVRCESPEEPGRRSRLCTYKDVCDALEDS--TEKIQSIFLDLPKAKEAQW-- 1031

Query: 357  ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
             +  AFSKMT LRLLKI N+ L  G EYLS  LR L W  YP K LP+  + D+ +E+YM
Sbjct: 1032 -NMTAFSKMTKLRLLKIHNVDLSEGPEYLSKELRFLEWHAYPSKSLPACFRPDELVELYM 1090

Query: 417  CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
              S I +LW G K L  LK++ LS+S  LI  PDFTG PNLE LILEGC  L E+HPS  
Sbjct: 1091 SCSSIEQLWCGCKILVNLKIINLSNSLYLINTPDFTGIPNLESLILEGCASLSEVHPSFG 1150

Query: 477  LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
             H KL ++N+ +C SL  LP  + M+SLE   L S                    K  +F
Sbjct: 1151 RHKKLQLVNLVNCYSLRILPSNLEMESLEVCTLSSCS------------------KLDKF 1192

Query: 537  PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
            P+IV ++  L EL L+GTAI  L  S   L+GLVLL++ NC++LE +P ++  LK L+ L
Sbjct: 1193 PDIVGNINCLRELRLDGTAIAKLSSSFHCLAGLVLLSMNNCKNLESIPSSIRGLKSLKRL 1252

Query: 597  KLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPS 656
             +S CS+LK  PE +  ++ L E    GTSI++ P+S  LL  L++L+   CK +     
Sbjct: 1253 DVSDCSELKNIPENLGEVESLEEFDASGTSIRQPPTSFFLLKNLKVLSFKGCKRI----- 1307

Query: 657  SIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT-----AVPHSTSWYSYIPIN 711
                      +NL+     + +  +L  + SLEELD+        AVP      S +   
Sbjct: 1308 ---------AVNLT-----DQILPSLSGLCSLEELDLCACNLGEGAVPEDIGCLSSLRSL 1353

Query: 712  LMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPT 770
             + ++  + LP S++ L  L KL L DC ++E                            
Sbjct: 1354 NLSRNNFISLPKSINQLSRLEKLALKDCVMLE---------------------------- 1385

Query: 771  SITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACL 830
                                SLP++P  +++V+++GC  L  + D +KLC    +   CL
Sbjct: 1386 --------------------SLPEVPLKVQKVKLDGCLKLKEIPDPIKLCSLKRSEFKCL 1425

Query: 831  DSLKLL---GNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRP 887
            +  +L    G  ++  +ML +YL+  S+ R    + VPG+EIP WF +Q++ SSI V  P
Sbjct: 1426 NCWELYMHNGQNNMGLNMLEKYLQG-SSPRPGFGIAVPGNEIPGWFTHQSKESSIRVQMP 1484

Query: 888  SNLY--NKKKLVGYAICCVF 905
            SN    +    +G+A C  F
Sbjct: 1485 SNYLDGDDNGWMGFAACAAF 1504



 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 219/435 (50%), Positives = 293/435 (67%), Gaps = 13/435 (2%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           +DSR + L   +D  ++D   IGICGMGG+GKTT+ARV+YD I  +F  S FL NVRE+ 
Sbjct: 199 IDSRLKVLNEYIDEQANDTLFIGICGMGGMGKTTVARVLYDRIRWQFGGSCFLANVREVF 258

Query: 60  SSKGGLVSLQRQLLSQL---LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQL 116
           + K GL  LQ QLLS++   L  A +S       ID++  RL+ KKVLL++DDV D +QL
Sbjct: 259 AEKDGLCRLQEQLLSEISMELPTARDSSRR----IDLIKRRLRLKKVLLILDDVDDEEQL 314

Query: 117 QSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
           Q LA     FG GSRIIITSR++H+L +HGV  +Y+   LN  +AL LF+ KAFK  QP 
Sbjct: 315 QMLAAEHGTFGPGSRIIITSRNKHVLDSHGVTRIYEADKLNDKDALMLFSWKAFKRDQPA 374

Query: 177 QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
           ++  +LS +++ YA GLPLALEV+GSFL  R + EW+S ++R+   P  +I+D+L+ISFD
Sbjct: 375 EDLSELSKQVVGYANGLPLALEVIGSFLHKRGLREWKSAIDRMNDIPDRKIIDVLRISFD 434

Query: 237 GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
           GL ELEKKIFLDIACF KG  +D +T  L+ CGFH  IG++ LIEK LI V  + + MH+
Sbjct: 435 GLHELEKKIFLDIACFLKGMKKDRITRLLDSCGFHADIGMQALIEKSLIRVSRDEIRMHN 494

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LLQ++G++IV+ +SPEE G+RSRL   ++VC  L +STG   +E I +D    +   +  
Sbjct: 495 LLQKMGEEIVRCESPEEPGRRSRLCTYKDVCDALKDSTGK--IESIFVDLPKAKEAPW-- 550

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            +  AFSKMT LRLLKI N+ L  G EYLSN LR L W  YP K LP+  ++D  +E+YM
Sbjct: 551 -NMTAFSKMTKLRLLKIHNVDLSEGPEYLSNELRFLEWHAYPSKSLPACFRLDDLVELYM 609

Query: 417 CYSRIGELWKGIKHL 431
             S I +LW G K L
Sbjct: 610 SCSSIEQLWCGCKLL 624


>gi|357507435|ref|XP_003624006.1| TMV resistance protein N [Medicago truncatula]
 gi|87162908|gb|ABD28703.1| TIR [Medicago truncatula]
 gi|355499021|gb|AES80224.1| TMV resistance protein N [Medicago truncatula]
          Length = 1134

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 355/787 (45%), Positives = 497/787 (63%), Gaps = 63/787 (8%)

Query: 3   SRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK 62
           S+ E++   +  G +DVR IGI GMGG+GK+TIAR VY+ I  EFE + FL+NVREIS  
Sbjct: 200 SKVEEVNKFLGMGLNDVRFIGIWGMGGIGKSTIARAVYETIRCEFELTCFLENVREISET 259

Query: 63  GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGN 122
            GLV LQRQLLS L  ++ N   +++DG   + + L RKKVLLV+DDV ++ QL++L G 
Sbjct: 260 NGLVHLQRQLLSHL-SISRNDFHDLYDGKKTIQNSLCRKKVLLVLDDVNELNQLENLVGK 318

Query: 123 REWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQL 182
           ++WFG GSR+IIT+RD+HLL THGV + YK   L   +AL LF +KAFK  +P +  + L
Sbjct: 319 QDWFGPGSRVIITTRDKHLLMTHGVHKTYKTGMLCKHDALVLFCLKAFKGDKPQEGYLDL 378

Query: 183 SARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELE 242
           S  ++ Y GGLPLALEVLGS+L GR++D W S +++L   P   + D L+IS+D L  +E
Sbjct: 379 SKEVVDYCGGLPLALEVLGSYLYGRNIDVWHSAVKKLRSFPHPRVQDNLKISYDSLDTME 438

Query: 243 KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH--NNTLWMHDLLQE 300
           K IFLDIACFFKG   D V + LE CG+ P IGI++LIE+ LIT+   NN L MHDLLQE
Sbjct: 439 KDIFLDIACFFKGMKGDKVIDILESCGYFPQIGIQILIERSLITLDSVNNKLGMHDLLQE 498

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGI---VLDNYH-HENEVYLC 356
           +G+ IV ++SP +  +RSRLW +E++  VLT++ GTE +  I   +L  Y  H N     
Sbjct: 499 MGRDIVFQESPNDPCRRSRLWSQEDIDRVLTKNKGTEAINSIDMKLLQPYEAHWN----- 553

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
              +AFSK + L+ L +C +QLP GL  L + L++L WRG PLK LP   Q+D+ ++I +
Sbjct: 554 --TEAFSKTSQLKFLSLCEMQLPLGLSCLPSSLKVLHWRGCPLKTLPITTQLDELVDITL 611

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
            +S+I +LW+G+K ++K+K + L+ S+NL R+PDF+G PNLEKLILEGC  L E+HPSL 
Sbjct: 612 SHSKIEQLWQGVKFMEKMKYLNLAFSKNLKRLPDFSGVPNLEKLILEGCEGLIEVHPSLA 671

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
            H K++++N+KDC SL +L GK+ M SL+KL L                  SG  KF+  
Sbjct: 672 HHKKVVLVNLKDCKSLKSLSGKLEMSSLKKLIL------------------SGSSKFKFL 713

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
           PE  E ME+LS L LEGT IR LPLS+  L GL  LNLK+C+SL  LP T+  L  L +L
Sbjct: 714 PEFGEKMENLSMLALEGTDIRKLPLSLGRLVGLTNLNLKDCKSLVCLPDTIHGLNSLITL 773

Query: 597 KLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK------- 649
            +SGCSKL + P+ ++ +K L EL  + T+I E+PSSI  L  L++L+ + C+       
Sbjct: 774 DISGCSKLCRLPDGLKEIKCLEELHANDTAIDELPSSIFYLDSLKVLSFAGCQGPSTTSM 833

Query: 650 ----------------NLVRLPSSIIALKSLKTLNLSGC-FKLENVPETLGQIESLEELD 692
                           N  RLPSS++ L SL+ LNLS C    E+ P     + SL+ LD
Sbjct: 834 NWFLPFNLMFGSQPASNGFRLPSSVMGLPSLEYLNLSYCNLSEESFPNYFHHLSSLKSLD 893

Query: 693 ISG---TAVPHSTSWYSYIPINLMRKSVALK-LPSLSGLCSLRKLNLTDCNLMEGALPSD 748
           ++G     +P S S  S +    +     L+ LP L    ++ +LN ++C+ ++  +  +
Sbjct: 894 LTGNNFVIIPSSISKLSRLRFLCLNWCQKLQLLPELP--LTMTQLNASNCDSLD-TMKFN 950

Query: 749 IGNLCSL 755
              LCSL
Sbjct: 951 PAKLCSL 957


>gi|224116210|ref|XP_002331988.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832112|gb|EEE70589.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1017

 Score =  583 bits (1503), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 390/988 (39%), Positives = 547/988 (55%), Gaps = 153/988 (15%)

Query: 27  MGGLGKTTIARVVYDLISHEFEASGFLDNVREI-SSKGGLVSLQRQLLSQLLKLADNSIW 85
           MGG+GKTT+ARVVYD I  +FE S FL NVRE+ + K G   LQ QLLS++L +   S+W
Sbjct: 1   MGGIGKTTVARVVYDRIRWQFEGSCFLANVREVFAEKDGRRRLQEQLLSEIL-MERASVW 59

Query: 86  NVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTH 145
           +   GI+M+  RL+ KK+LL++DDV D +QL+ LA    WFG GSRIIITSRD+ ++  +
Sbjct: 60  DSSRGIEMIKRRLRLKKILLILDDVDDKEQLEFLAEEPGWFGPGSRIIITSRDKKVVTGN 119

Query: 146 GVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLS 205
             + +Y+   LN D+AL LF+ KA K   P ++ V+LS +++ YA GLPLALEV+GSFL 
Sbjct: 120 NNNRIYEAEKLNDDDALMLFSQKASKNDHPAEDFVELSKQVVGYANGLPLALEVIGSFLY 179

Query: 206 GRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFL 265
            RS+ EW+S + R+   P  +I+D+L+ISFDGL E +KKIFLDIACF  G   D +T  L
Sbjct: 180 DRSIPEWKSAINRMNEIPHGKIIDVLRISFDGLHESDKKIFLDIACFLMGFKIDRITRIL 239

Query: 266 EGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEE 325
           E  GFH  IGI +LIEK LI+V  + +WMH+LLQ +G++IV+ +SPEE G+RSRLW  E+
Sbjct: 240 ESRGFHAGIGIPILIEKSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYED 299

Query: 326 VCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYL 385
           VC  L ++T                       + KAFSKM+ LRLLKI N+QL  G E L
Sbjct: 300 VCLALMDNTAQ--------------------WNMKAFSKMSKLRLLKINNVQLSEGPEDL 339

Query: 386 SNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENL 445
           SN+LR L W  YP K LP+ LQ+D+ +E++M  S I +LW G K    LK++ LS+S NL
Sbjct: 340 SNKLRFLEWHSYPSKSLPAGLQVDELVELHMANSSIEQLWYGCKSAVNLKIINLSNSLNL 399

Query: 446 IRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLE 505
           I+ PDFTG PNLE LILEGCT L E+HPSL  H KL  +N+  C S+  LP  + M+SL+
Sbjct: 400 IKTPDFTGIPNLENLILEGCTSLSEVHPSLARHKKLQHVNLVHCQSIRILPSNLEMESLK 459

Query: 506 KLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIEL 565
                           + TLD  G  K   FP+IV +M  L  L L+GT I  L  SI  
Sbjct: 460 ----------------VFTLD--GCSKLERFPDIVGNMNCLMVLRLDGTGIAELSSSIRH 501

Query: 566 LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT 625
           L GL LL++ NC++LE +P ++  LK L+ L LS CS LK  PE +  ++ L E  + GT
Sbjct: 502 LIGLGLLSMTNCKNLESIPSSIGCLKSLKKLDLSCCSALKNIPENLGKVESLEEFDVSGT 561

Query: 626 SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI 685
           SI+++P+S+ LL  L++L+L  CK +V LP S+  L SL+ L L  C             
Sbjct: 562 SIRQLPASVFLLKNLKVLSLDGCKRIVVLP-SLSRLCSLEVLGLRAC------------- 607

Query: 686 ESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGA 744
                 ++    +P    + S +    + ++  + LP +++ L  L  L L DC +    
Sbjct: 608 ------NLREGELPEDIGYLSSLRSLDLSQNNFVSLPKAINQLSELEMLVLEDCTM---- 657

Query: 745 LPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRV 804
                  L SL E+                 SK+  + L  C+ L+++P           
Sbjct: 658 -------LASLPEVP----------------SKVQTVNLNGCRSLKTIP----------- 683

Query: 805 NGCASLVTLLDALKLCKSDSTMIACLDSLKLL---GNKSLAFSMLREYLEAVSNTRQHLS 861
                     D +KL  S  +   CL+  +L    G +S+  +ML  YL+  SN R    
Sbjct: 684 ----------DPIKLSSSKRSEFLCLNCWELYNHNGQESMGLTMLERYLQGFSNPRPGFG 733

Query: 862 VVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF-----------HVLKN 910
           + VPG+EIP WF ++++GSSI+V  PS        +G+  C  F           H   N
Sbjct: 734 IAVPGNEIPGWFNHRSKGSSISVQVPSG------RMGFFACVAFNANDESPSLFCHFKAN 787

Query: 911 SRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESN 970
            R N     YP+             I F    G   SDH+WL YLS     +++   E  
Sbjct: 788 GREN-----YPSPMC----------INFE---GHLFSDHIWLFYLSFDYLKELQ---EWQ 826

Query: 971 LEPFESNHVNVSFEPWLGQGLEVKMCGL 998
            E F  +++ +SF  +  QG++V  CG+
Sbjct: 827 HESF--SNIELSFHSY-EQGVKVNNCGV 851


>gi|37781278|gb|AAP44391.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1121

 Score =  572 bits (1474), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 379/967 (39%), Positives = 534/967 (55%), Gaps = 119/967 (12%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M+S   ++  ++  GS  VR +GI GM G+GKTT+ARV+YD I  +FE + FL  VR+ S
Sbjct: 198  MESHMHQVYKMLGIGSGGVRFLGILGMSGVGKTTLARVIYDNIQSQFEGACFLHEVRDRS 257

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            +K GL  LQ  LLS++L +    I + F+G +M   RLQ KKVLLV+DDV  + QL +LA
Sbjct: 258  AKQGLEHLQEILLSEILVVKKLRINDSFEGANMQKQRLQYKKVLLVLDDVDHIDQLNALA 317

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            G REWFG GSRIIIT++D+HLL  +  +++Y+   L+  E+LQLF   AFK     +E  
Sbjct: 318  GEREWFGDGSRIIITTKDKHLLVKYETEKIYRMGTLDKYESLQLFKQHAFKKNHSTKEFE 377

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
             LSA++I + GGLPLAL+VLGSFL GR +DEW S +ERL+  P +EIL  L+ SF GL  
Sbjct: 378  DLSAQVIEHTGGLPLALKVLGSFLYGRGLDEWISEVERLKQIPQNEILKKLEPSFTGLNN 437

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            +E+KIFLDIACFF G  +D VT  LE   F PVIGI+VL+EKCLIT+    + +H L+QE
Sbjct: 438  IEQKIFLDIACFFSGKKKDSVTRILESFHFSPVIGIKVLMEKCLITILKGRITIHQLIQE 497

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G  IV+R++       SRLWK E++C VL ++  T+ +EG+ L   H  NE  +    K
Sbjct: 498  MGWHIVRREASYNPRICSRLWKREDICPVLEQNLCTDKIEGMSL---HLTNEEEVNFGGK 554

Query: 361  AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
            A  +MT+LR LK  N  +  G E+L + LR L W GYP K LP++ + D+ + + +  SR
Sbjct: 555  ALMQMTSLRFLKFRNAYVYQGPEFLPDELRWLDWHGYPSKNLPNSFKGDQLVSLKLKKSR 614

Query: 421  IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
            I +LWK  K L KLK M LSHS+ LIRMPDF+  PNLE+L+LE CT L EI+ S+    K
Sbjct: 615  IIQLWKTSKDLGKLKYMNLSHSQKLIRMPDFSVTPNLERLVLEECTSLVEINFSIGDLGK 674

Query: 481  LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
            L++LN+K+C +L T+P +I ++ LE L L                  SG  K R FPEI 
Sbjct: 675  LVLLNLKNCRNLKTIPKRIRLEKLEVLVL------------------SGCSKLRTFPEIE 716

Query: 541  EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
            E M  L+EL+L  T++  LP S+E  SG+ ++NL  C+ LE LP ++  LKCL++L +SG
Sbjct: 717  EKMNRLAELYLGATSLSELPASVENFSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSG 776

Query: 601  CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL--------- 651
            CSKLK  P+ +  +  + +L    T+I+ +PSS+ LL  L+ L+LS C  L         
Sbjct: 777  CSKLKNLPDDLGLLVGIEKLHCTHTAIQTIPSSMSLLKNLKHLSLSGCNALSSQVSSSSH 836

Query: 652  ------VRLPSSIIALKSLKTLNLSGC-FKLENVPETLGQIESLEELDISGTAVPHSTSW 704
                  +    ++  L SL  L+LS C      +   LG + SL+ L + G         
Sbjct: 837  GQKSMGINFFQNLSGLCSLIKLDLSDCNISDGGILSNLGLLPSLKVLILDGNN------- 889

Query: 705  YSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNS 764
            +S IP             S+S L  L+ L L  C  +E  LP                  
Sbjct: 890  FSNIPA-----------ASISRLTRLKCLALHGCTSLE-ILP------------------ 919

Query: 765  FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDS 824
               LP SI  +    +  L    +L   P L                          S+ 
Sbjct: 920  --KLPPSIKGIYANESTSLMGFDQLTEFPML--------------------------SEV 951

Query: 825  TMIACLDSLKLLGNKSLAFSMLREYLEAVS-NTRQHLSVVVPGSEIPEWFMYQNEGS-SI 882
            ++  C   +K   + S+A  +L+E LEA+  N R    + VPG EIPEWF Y+N G+ SI
Sbjct: 952  SLAKCHQLVKNKLHTSMADLLLKEMLEALYMNFR--FCLYVPGMEIPEWFTYKNWGTESI 1009

Query: 883  TVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKF 942
            +V  P+N +      G+ +C V     + R     G +     N HI   ++G+     F
Sbjct: 1010 SVALPTNWFT-PTFRGFTVCVVL----DKRIPFILGPF-----NIHI---VHGLKISTSF 1056

Query: 943  GQAGSDH 949
            G  GS++
Sbjct: 1057 GPIGSEN 1063


>gi|105922306|gb|ABF81409.1| TIR-NBS-NBS-LRR type disease resistance protein [Populus trichocarpa]
 gi|105922325|gb|ABF81410.1| TIR-NBS-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1778

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 364/890 (40%), Positives = 515/890 (57%), Gaps = 108/890 (12%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
            +DSR + L   +D  ++D   IGICGMGG+GKTT+ARV+YD I  +F+ S FL NVRE+ 
Sbjct: 699  IDSRLKVLNEYIDEQATDTLFIGICGMGGMGKTTVARVMYDRIRWQFQGSCFLANVREVF 758

Query: 60   SSKGGLVSLQRQLLSQL---LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQL 116
            + K G   LQ QLLS++   L  A +S       ID++  RL+ KKVLL++DDV D +QL
Sbjct: 759  AEKDGRCRLQEQLLSEISMELPTARDSSRR----IDLIKRRLRLKKVLLILDDVDDEEQL 814

Query: 117  QSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
            Q LA     FG GSRIIITSR++H+L +HGV  +Y+   LN  +AL LF+ KAFK  QP 
Sbjct: 815  QMLAAEHGSFGPGSRIIITSRNKHVLDSHGVTRIYEADKLNDKDALMLFSWKAFKRDQPA 874

Query: 177  QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
            ++  +LS +++ YA GLPLALEV+GSFL  R + EW+S ++R+   P  +I+D+L+ISFD
Sbjct: 875  EDLSELSKQVVGYANGLPLALEVIGSFLHKRGLREWKSAIDRMNDIPDRKIIDVLRISFD 934

Query: 237  GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
            GL ELEKKIFLDIACF KG  +D +   L+ CGFH  IG++ LIEK LI+V  + + MH+
Sbjct: 935  GLHELEKKIFLDIACFLKGMKKDRIARLLDSCGFHADIGMQALIEKSLISVSRDEIRMHN 994

Query: 297  LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
            LLQ++G++IV+ +SPEE G+RSRL   ++VC  L +S  TE ++ I LD    +   +  
Sbjct: 995  LLQKMGEEIVRCESPEEPGRRSRLCTYKDVCDALEDS--TEKIQSIFLDLPKAKEAQW-- 1050

Query: 357  ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
             +  AFSKMT LRLLKI N+ L  G EYLS  LR L W  YP K LP+  + D+ +E+YM
Sbjct: 1051 -NMTAFSKMTKLRLLKIHNVDLSEGPEYLSKELRFLEWHAYPSKSLPACFRPDELVELYM 1109

Query: 417  CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
              S I +LW G K L  LK++ LS+S  LI  PDFTG PNLE LILEGC  L E+HPS  
Sbjct: 1110 SCSSIEQLWCGCKILVNLKIINLSNSLYLINTPDFTGIPNLESLILEGCASLSEVHPSFG 1169

Query: 477  LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
             H KL ++N+ +C SL  LP  + M+SLE   L S                    K  +F
Sbjct: 1170 RHKKLQLVNLVNCYSLRILPSNLEMESLEVCTLSSCS------------------KLDKF 1211

Query: 537  PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
            P+IV ++  L EL L+GTAI  L  S   L+GLVLL++ NC++LE +P ++  LK L+ L
Sbjct: 1212 PDIVGNINCLRELRLDGTAIAKLSSSFHCLAGLVLLSMNNCKNLESIPSSIRGLKSLKRL 1271

Query: 597  KLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPS 656
             +S CS+LK  PE +  ++ L E    GTSI++ P+S  LL  L++L+   CK +     
Sbjct: 1272 DVSDCSELKNIPENLGEVESLEEFDASGTSIRQPPTSFFLLKNLKVLSFKGCKRI----- 1326

Query: 657  SIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT-----AVPHSTSWYSYIPIN 711
                      +NL+     + +  +L  + SLEELD+        AVP      S +   
Sbjct: 1327 ---------AVNLT-----DQILPSLSGLCSLEELDLCACNLGEGAVPEDIGCLSSLRSL 1372

Query: 712  LMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPT 770
             + ++  + LP S++ L  L KL L DC ++E                            
Sbjct: 1373 NLSRNNFISLPKSINQLSRLEKLALKDCVMLE---------------------------- 1404

Query: 771  SITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACL 830
                                SLP++P  +++V+++GC  L  + D +KLC    +   CL
Sbjct: 1405 --------------------SLPEVPLKVQKVKLDGCLKLKEIPDPIKLCSLKRSEFKCL 1444

Query: 831  DSLKLL---GNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQN 877
            +  +L    G  ++  +ML +YL+  S+ R    + VPG+EIP WF +Q+
Sbjct: 1445 NCWELYMHNGQNNMGLNMLEKYLQG-SSPRPGFGIAVPGNEIPGWFTHQS 1493



 Score =  370 bits (950), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 215/428 (50%), Positives = 289/428 (67%), Gaps = 13/428 (3%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           +DSR + L   +D  ++D   IGICGMGG+GKTT+ARV+YD I  +F  S FL NVRE+ 
Sbjct: 249 IDSRLKVLNEYIDEQANDTLFIGICGMGGMGKTTVARVLYDRIRWQFGGSCFLANVREVF 308

Query: 60  SSKGGLVSLQRQLLSQL---LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQL 116
           + K GL  LQ QLLS++   L  A +S       ID++  RL+ KKVLL++DDV D +QL
Sbjct: 309 AEKDGLCRLQEQLLSEISMELPTARDSSRR----IDLIKRRLRLKKVLLILDDVDDEEQL 364

Query: 117 QSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
           Q LA     FG GSRIIITSR++H+L +HGV  +Y+   LN  +AL LF+ KAFK  QP 
Sbjct: 365 QMLAAEHGTFGPGSRIIITSRNKHVLDSHGVTRIYEADKLNDKDALMLFSWKAFKRDQPA 424

Query: 177 QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
           ++  +LS +++ YA GLPLALEV+GSFL  R + EW+S ++R+   P  +I+D+L+ISFD
Sbjct: 425 EDLSELSKQVVGYANGLPLALEVIGSFLHKRGLREWKSAIDRMNDIPDRKIIDVLRISFD 484

Query: 237 GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
           GL ELEKKIFLDIACF KG  +D +T  L+ CGFH  IG++ LIEK LI V  + + MH+
Sbjct: 485 GLHELEKKIFLDIACFLKGMKKDRITRLLDSCGFHADIGMQALIEKSLIRVSRDEIRMHN 544

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LLQ++G++IV+ +SPEE G+RSRL   ++VC  L +STG   +E I +D    +   +  
Sbjct: 545 LLQKMGEEIVRCESPEEPGRRSRLCTYKDVCDALKDSTGK--IESIFVDLPKAKEAPW-- 600

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            +  AFSKMT LRLLKI N+ L  G EYLSN LR L W  YP K LP+  ++D  +E+YM
Sbjct: 601 -NMTAFSKMTKLRLLKIHNVDLSEGPEYLSNELRFLEWHAYPSKSLPACFRLDDLVELYM 659

Query: 417 CYSRIGEL 424
             S I +L
Sbjct: 660 SCSSIEQL 667


>gi|224127917|ref|XP_002329209.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870990|gb|EEF08121.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1470

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 390/1114 (35%), Positives = 582/1114 (52%), Gaps = 166/1114 (14%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MDSR E++   + +   +   +GI GMGG GKTTIA  +++ I+ E+E   FL NVRE  
Sbjct: 191  MDSRMEQIEASLCTKLPEFCFVGIWGMGGTGKTTIAGEIFNKIAREYEGHYFLANVRESE 250

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
              GGL  ++ +L S++ +  +  I     G   +  R+ RKK+L+V DDV DV Q++ L 
Sbjct: 251  KNGGLFRIRDELFSKITEEENLHIRTPRIGHPFIKDRICRKKILIVFDDVNDVDQIEMLL 310

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            G  E FG GSRII+TSRD+ +LK +  D++++  GLN+ EAL LF++ AFK  QP    +
Sbjct: 311  GGCESFGPGSRIILTSRDKQVLKKYA-DKIFEVEGLNHREALHLFSLHAFKDNQPPYNYM 369

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            +LS R I YA G PLAL+VLGS L GR+  EW S L ++E     ++  +L+IS++ L  
Sbjct: 370  ELSVRAINYAKGNPLALKVLGSSLFGRTTKEWESALNKVEKLTRQKVHSVLRISYEALDS 429

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             EK IFLDIACFF+G+  D+V   L+GCGF   IG  VLI++CLI + ++ + MHDLLQE
Sbjct: 430  EEKSIFLDIACFFRGHRVDFVKRILDGCGFKTDIGFSVLIDRCLIKISDDKVEMHDLLQE 489

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +   +V+++S +ELG +SRLW  ++V  VLT + GT  VEGI LD      E+ L  S+ 
Sbjct: 490  MAHDVVRKESLDELGGQSRLWSPKDVYQVLTNNLGTGKVEGIFLD-VSKIREIEL--SST 546

Query: 361  AFSKMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
            A  +M  LRLLKI        C + LP+GLE LS  LR L W GYPL  LPSN +    +
Sbjct: 547  ALGRMYKLRLLKIYNSEAGVKCRVHLPHGLESLSEELRYLHWDGYPLTSLPSNFRPQNLV 606

Query: 413  EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
            EI +  S++  LW+G ++L  LK + LS+ E++  +PD + A NLE+L L+ CT L ++ 
Sbjct: 607  EINLSCSKVNRLWRGDQNLVNLKDVNLSNCEHITFLPDLSKARNLERLNLQFCTSLVKVP 666

Query: 473  PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
             S+   ++L+ L+++ C  L+ LP +I                     CL TL++SG   
Sbjct: 667  SSIQHLDRLVDLDLRGCERLVNLPSRI------------------NSSCLETLNLSGCAN 708

Query: 533  FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCR-------------- 578
             ++ PE       L+ L+L  TA+  LP SI  LSGLV LNLKNC+              
Sbjct: 709  LKKCPETA---RKLTYLNLNETAVEELPQSIGELSGLVALNLKNCKLLVNLPENMYLLTS 765

Query: 579  ------------------------------SLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
                                          ++E LP ++ +L+ L  L LSGCS + +FP
Sbjct: 766  LLLVDISGCSSISRLPDFSRNIRYLYLNGTAIEELPSSIGDLRKLIYLNLSGCSSITEFP 825

Query: 609  EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
            ++  ++K   EL+LDGT+I+E+PSSI+ L +L  L+L +CK    LPSSI  L+ L+ LN
Sbjct: 826  KVSNNIK---ELYLDGTAIREIPSSIDCLFELVELHLRNCKQFEILPSSICTLRKLERLN 882

Query: 669  LSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLC 728
            LSGC +  + PE L  +  L  L +  T +    S     PI  ++    L++ +   L 
Sbjct: 883  LSGCLQFRDFPEVLEPMVCLRYLYLEETRITKLPS-----PIGNLKGLACLEVGNCKYLN 937

Query: 729  S------------------LRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPT 770
                               LRKLNL  C++    +P  +G L SL+ L LS N+F ++P 
Sbjct: 938  DIECFVDLQLSERWVDLDYLRKLNLDGCHI--SVVPDSLGCLSSLEVLDLSGNNFSTIPL 995

Query: 771  SITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL-----------------VTL 813
            SI  LS+L  + L +CKRL+SLP+LPP + ++  + C SL                    
Sbjct: 996  SINKLSELQYLGLRNCKRLESLPELPPRLSKLDADNCESLNYLGSSSSTVVKGNIFEFIF 1055

Query: 814  LDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWF 873
             + L LC+ +  +   L   +L   +      L + LE         S  +PG   P+W 
Sbjct: 1056 TNCLSLCRINQILPYALKKFRLYTKR---LHQLTDVLEGAC------SFFLPGGVSPQWL 1106

Query: 874  MYQNEGSSITVTRPSNLYNKKKLVGYAICCV--FHVLKNSRGNNCFGSYP-----THQLN 926
             +Q+ GS++T    S+  N  K +G+++C V  FH   +S    C   +      +H L 
Sbjct: 1107 SHQSWGSTVTCQLSSHWAN-SKFLGFSLCAVIAFHSFGHSLQVKCTYHFSNEHGDSHDLY 1165

Query: 927  CHIGHGIYG----------IGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFES 976
            C++ HG Y           +GF D    A  D+++  Y          + +E  LE    
Sbjct: 1166 CYL-HGWYDEKRIDSEHILVGF-DPCLVAKEDYMFSEY--------SEVSVEFQLEDING 1215

Query: 977  NHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEELD 1010
            N + +          +V  CG+  +Y DE+  +D
Sbjct: 1216 NLLPLDL-------CQVHKCGVRLLYEDEIHCID 1242



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 8/93 (8%)

Query: 848  EYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCV--F 905
            E+LE    +++  S    G   PEWF +Q+ GS++T    S+  N  + +G+++C +  F
Sbjct: 1282 EFLEEPDVSKRVSSFRYHGDVTPEWFSHQSWGSTVTCQLSSHWAN-SEFLGFSLCAIIAF 1340

Query: 906  HVLKNSRGNNCFGSY-----PTHQLNCHIGHGI 933
            H  K+S    C   +      +H L C++   I
Sbjct: 1341 HSFKHSLQVKCTYHFRNEHGDSHDLYCYLHEEI 1373


>gi|147834354|emb|CAN69843.1| hypothetical protein VITISV_019700 [Vitis vinifera]
          Length = 1284

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 361/843 (42%), Positives = 511/843 (60%), Gaps = 58/843 (6%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M+   ++L+ L+   S+DVRMIGI G+GG+GKTTIA+VVY+ ISH+FE+  FL+NVRE S
Sbjct: 206  MNFHLKELKSLIKIESNDVRMIGIYGLGGIGKTTIAKVVYNNISHQFESRIFLENVRERS 265

Query: 61   -SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
                 L+ LQ++LL+ + K     I N+ +G++++ +R   K+VLL++DDV   +QLQ L
Sbjct: 266  KDHSSLLQLQKELLNGVAKGKYLKISNIHEGVNVIRNRFLSKRVLLILDDVDKSEQLQFL 325

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
             G   WFG  SRIIITSRD+HLL+ + +D  Y+   L+Y+E++QLF + AFK     ++ 
Sbjct: 326  VGEHGWFGPRSRIIITSRDQHLLEEYEMDASYEVKVLDYEESMQLFCLHAFKQNILRKDY 385

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            V LS  ++ Y  GLPLALE+LGSFL  +S  EW STL++L+ +P   + ++L+ISFDGL 
Sbjct: 386  VDLSNDVVNYVNGLPLALEILGSFLFNKSKLEWESTLQKLKRKPNMNVQNVLKISFDGLD 445

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
            E+EK+IFLD+ACFFKG +   VT  L+    H  I IRVL +KCLIT+ +N +WMHDL+Q
Sbjct: 446  EIEKEIFLDVACFFKGWNETDVTRLLD----HANIVIRVLSDKCLITLSHNIIWMHDLVQ 501

Query: 300  ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
            E+G++IV++  P+E GK SRLW  E++C VL    GTE +EGI LD         +  + 
Sbjct: 502  EMGREIVRQNHPKEPGKWSRLWDPEDICLVLRRKMGTEAIEGIFLDMSRSRE---ISFTT 558

Query: 360  KAFSKMTNLRLLKIC--------------NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSN 405
            +AF +M  LRL K+                  LP   E  S+ LR L W GY LK LPSN
Sbjct: 559  EAFRRMERLRLFKVYWSHGFVNYMGKEYQKFLLPEDFEIPSHDLRYLHWEGYSLKSLPSN 618

Query: 406  LQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
               +  IE+ + +S I +LW+G K+L++LK++ LS S+ L  +P F+  PNLE+L +E C
Sbjct: 619  FHGENLIELNLKHSNIEQLWQGKKYLEELKMLTLSESQLLNEIPHFSNMPNLEQLNIELC 678

Query: 466  TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI-LMKSLEKL----------------- 507
             +L ++  S+ +  KL +LN++ C  + +LP  I  + SL++L                 
Sbjct: 679  EKLDKVDSSIGILKKLTLLNLRGCQKISSLPSTIQYLVSLKRLYLHSIAIDELPSSIHHL 738

Query: 508  ------------NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTA 555
                        NL+SLP++I  LK L  LD+ G      FPEI+E+ME L+EL+L GT 
Sbjct: 739  TQLQTLSIRGCENLRSLPSSICRLKSLEELDLYGCSNLXTFPEIMENMEWLTELNLSGTH 798

Query: 556  IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMK 615
            ++GLP SIE L+ L  L L+ C++L  LP ++  LK L  L L GCS L+ FPEI+  M+
Sbjct: 799  VKGLPSSIEYLNHLTRLELRCCKNLRSLPSSIWRLKSLEELDLFGCSNLETFPEIMEDME 858

Query: 616  DLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
             L EL L  T IKE+P SI  L  L  L L  C+NL  LPSSI  LKSL+ L+L  C  L
Sbjct: 859  CLMELNLSRTCIKELPPSIGYLNHLTFLGLQCCQNLRSLPSSICRLKSLEELDLYYCSNL 918

Query: 676  ENVPETLGQIESLEELDISGTAVPHSTSWYSYI-PINLMRKSVALKLPSL-SGLCSLR-- 731
            E  PE +  +E L +LD+SGT +    S   Y+  +  MR      L SL S +C L+  
Sbjct: 919  EIFPEIMENMECLIKLDLSGTHIKELPSSIEYLNHLTSMRLVEXKNLRSLPSSICRLKFL 978

Query: 732  -KLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQ 790
             KLNL  C+ +E   P  + ++  LK+L LS  S   LP+SI +L+ L +  L  C  L+
Sbjct: 979  EKLNLYGCSHLE-TFPEIMEDMECLKKLDLSGTSIKKLPSSIGYLNHLTSFRLSYCTNLR 1037

Query: 791  SLP 793
            SLP
Sbjct: 1038 SLP 1040



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 143/431 (33%), Positives = 199/431 (46%), Gaps = 101/431 (23%)

Query: 362  FSKMTNLRLLKICNLQLPNGLEYLSN------RLRLLGWRG-YPLKFLPSNLQMDKTIE- 413
            FS M NL  L   N++L   L+ + +      +L LL  RG   +  LPS +Q   +++ 
Sbjct: 664  FSNMPNLEQL---NIELCEKLDKVDSSIGILKKLTLLNLRGCQKISSLPSTIQYLVSLKR 720

Query: 414  IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMP------------DFTGAPNLEKL- 460
            +Y+    I EL   I HL +L+ + +   ENL  +P            D  G  NL    
Sbjct: 721  LYLHSIAIDELPSSIHHLTQLQTLSIRGCENLRSLPSSICRLKSLEELDLYGCSNLXTFP 780

Query: 461  -ILEGCTRLYEIH---------PSLLLH-NKLIILNMKDCTSLITLPGKIL-MKSLEKL- 507
             I+E    L E++         PS + + N L  L ++ C +L +LP  I  +KSLE+L 
Sbjct: 781  EIMENMEWLTELNLSGTHVKGLPSSIEYLNHLTRLELRCCKNLRSLPSSIWRLKSLEELD 840

Query: 508  ----------------------------------------------------NLKSLPTT 515
                                                                NL+SLP++
Sbjct: 841  LFGCSNLETFPEIMEDMECLMELNLSRTCIKELPPSIGYLNHLTFLGLQCCQNLRSLPSS 900

Query: 516  ISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLK 575
            I  LK L  LD+        FPEI+E+ME L +L L GT I+ LP SIE L+ L  + L 
Sbjct: 901  ICRLKSLEELDLYYCSNLEIFPEIMENMECLIKLDLSGTHIKELPSSIEYLNHLTSMRLV 960

Query: 576  NCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIE 635
              ++L  LP ++  LK L  L L GCS L+ FPEI+  M+ L +L L GTSIK++PSSI 
Sbjct: 961  EXKNLRSLPSSICRLKFLEKLNLYGCSHLETFPEIMEDMECLKKLDLSGTSIKKLPSSIG 1020

Query: 636  LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSG--------CF----KLENVPETLG 683
             L  L    LS C NL  LPSSI  LKSL  L+LSG         F     + ++P  + 
Sbjct: 1021 YLNHLTSFRLSYCTNLRSLPSSIGGLKSLTKLSLSGRPNRVTEQLFLSKNNIHHIPSVIS 1080

Query: 684  QIESLEELDIS 694
            Q+ +LE LDIS
Sbjct: 1081 QLCNLECLDIS 1091


>gi|147768286|emb|CAN64759.1| hypothetical protein VITISV_033530 [Vitis vinifera]
          Length = 1206

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 331/726 (45%), Positives = 445/726 (61%), Gaps = 76/726 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEF-EASGFLDNVREI 59
           M SR + +  L+D GS DVRM+GI GM G+GK+TIA  VY+ I  +F E   FL NVRE 
Sbjct: 200 MGSRLQDMAQLLDIGSVDVRMVGIWGMAGIGKSTIAYQVYNKIYAQFDEGYCFLPNVREE 259

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S + GL  LQ +LLSQ+     N   N   GI+ +  RL  +KVL+V+DDV   +QL+ L
Sbjct: 260 SQRHGLAYLQEELLSQISGGNLNK-GNFNRGINFIKERLHSRKVLIVLDDVDMYEQLEVL 318

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AGN +WFG+GSRIIIT++D+ LL  HGVD +Y   GL Y+EAL+LF   AFK   P  + 
Sbjct: 319 AGNHDWFGAGSRIIITTKDKTLLNMHGVDAIYNVEGLKYNEALKLFCWCAFKHDLPTADY 378

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           +QL    ++Y  GLPLA++VLGSF+  +++DEW+S L++L+  P  ++  +L+ISFDGL 
Sbjct: 379 MQLCKNFVKYIEGLPLAIKVLGSFVKNKTIDEWKSALDKLKRIPHKDVQKVLRISFDGLD 438

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           + +K IFLDIACFFKG D+D+V   LE C F P   IRVL E  LI V NN L MHBLLQ
Sbjct: 439 DNQKDIFLDIACFFKGQDKDFVAKILESCDFFPANDIRVLEENSLILVSNNKLCMHBLLQ 498

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G +IV++++ +  GKRSRLW  +EV HVLT +TGTE VEG+VLD    +    L  SA
Sbjct: 499 EMGWEIVRQENVKYPGKRSRLWFHDEVNHVLTTNTGTEAVEGLVLDLSASKE---LHXSA 555

Query: 360 KAFSKMTNLRLLKI-----------------------------------------CNLQL 378
            AF++M  LR+L+                                          C L L
Sbjct: 556 GAFTEMNRLRVLRFYNVKMNGSLEYLSEXELFDTTYHPWRWRAHEIQRADEMQTDCKLHL 615

Query: 379 PNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMI 438
              L++LSN LR L W  YPLK LPSN    K +E+ MC SR+  LWKG K  +KLK + 
Sbjct: 616 SGDLKFLSNNLRSLYWHEYPLKSLPSNFHPKKLVELNMCSSRLEXLWKGDKSFEKLKFIK 675

Query: 439 LSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGK 498
           LSHS+ L R PDF+GAPNLE+LILEGC  + ++HPS+    KLI LN+  C +L +    
Sbjct: 676 LSHSQYLTRTPDFSGAPNLERLILEGCKSMVKVHPSIGALQKLIFLNLXGCKNLKSFASS 735

Query: 499 ILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRG 558
           I M SL+ L L                  SG  K ++FPE++E+M+ L +L L+ TA+R 
Sbjct: 736 IHMNSLQILTL------------------SGCSKLKKFPEMLENMKSLRQLLLDETALRE 777

Query: 559 LPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLS 618
           LP SI  L+GLVLLNL NC+ L  LP ++  L  L+ L L+GCS+LKK P+ + S++ L 
Sbjct: 778 LPSSIGRLNGLVLLNLTNCKKLVSLPQSLCKLTSLQILTLAGCSELKKLPDELGSLRCLV 837

Query: 619 ELFLDGTSIKEVPSSIELLTKLELLNLSDCK------NLVRLPS------SIIALKSLKT 666
            L  DG+ I+EVP SI LLT L++L+L+ CK      +L   P+      S++ L S+KT
Sbjct: 838 NLNADGSGIQEVPPSITLLTNLQVLSLAGCKKRNVVFSLWSSPTVCLQLRSLLNLSSVKT 897

Query: 667 LNLSGC 672
           L+LS C
Sbjct: 898 LSLSDC 903


>gi|255582274|ref|XP_002531928.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223528407|gb|EEF30442.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 943

 Score =  562 bits (1449), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 339/712 (47%), Positives = 459/712 (64%), Gaps = 45/712 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DSR E+L   +  G +DVR+IGICGMGG+GKTTIA   Y+ +S +FE   FL NVRE+S
Sbjct: 16  LDSRLEELHSHVGIGQNDVRIIGICGMGGIGKTTIATAYYNWMSIQFEGRAFLANVREVS 75

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           SKG L+SLQ QLLS++L      IWNV++G DM+ SRL+ K+VL+VIDDV  + QLQ+LA
Sbjct: 76  SKGRLLSLQEQLLSEILMGKKVKIWNVYNGTDMIKSRLRYKRVLVVIDDVNQLSQLQNLA 135

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G  +WFG GSR+IIT+RDEHLL +HGVDE+YK  GLN  EALQLF++KAF+   P ++ +
Sbjct: 136 GKSDWFGPGSRVIITTRDEHLLISHGVDEIYKVKGLNKSEALQLFSLKAFRNNHPQKDYM 195

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            LS  I+ YA GLPLALEVLGSFL  R+++E R+ L+R++  P  EILD LQISFDGL+E
Sbjct: 196 TLSTDIVYYANGLPLALEVLGSFLFNRTLEESRNALDRIKEIPKDEILDALQISFDGLEE 255

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
           +EK+IFLDIACFFKG + D++T  L+GCGF+P IGIRVLIEK LIT+    LWMHDLLQE
Sbjct: 256 MEKQIFLDIACFFKGKNIDHITKILDGCGFYPDIGIRVLIEKSLITIVGERLWMHDLLQE 315

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G ++VQ++SPEE G+RSRLW  +++ HVLT++TGT  VEG+VLD    E E+ L   A+
Sbjct: 316 MGWKLVQQESPEEPGRRSRLWLYKDIFHVLTKNTGTADVEGMVLDLPEAE-EIQL--EAQ 372

Query: 361 AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
           AF K+  +RLLK  N+     LEYLSN LR L W GYP + LP   Q ++ +E+ M YS+
Sbjct: 373 AFRKLKKIRLLKFRNVYFSQSLEYLSNELRYLKWYGYPFRNLPCTFQSNELLELNMSYSQ 432

Query: 421 IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
           + ++W+G K  +KLK+M LSHS+NL++ PDF G P+LEKL+LEGC  L EI  S+ +  +
Sbjct: 433 VEQIWEGTKQFNKLKIMKLSHSKNLVKTPDFRGVPSLEKLVLEGCLELQEIDQSIGILER 492

Query: 481 LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
           L +LN+KDC  L                   LP +I GLK L  +++SG        E +
Sbjct: 493 LALLNLKDCKKLSI-----------------LPESIYGLKALKIVNLSGCSILDYMLEEL 535

Query: 541 EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRS---------LEILPVTVSN-- 589
             ++ L EL + GT ++    S      L +L+L+ C           L +LP   SN  
Sbjct: 536 GDIKSLEELDVSGTTVKQPFSSFSHFKNLKILSLRGCSEQPPAIWNPHLSLLPGKGSNAM 595

Query: 590 -LKCLRSLKLSGCS-KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
            L  L  L L  C+ + +  P  +  +  L E  L G +   +P+S+  L+KLE L L +
Sbjct: 596 DLYSLMVLDLGNCNLQEETIPTDLSCLSSLKEFCLSGNNFISLPASVCRLSKLEHLYLDN 655

Query: 648 CKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP 699
           C+NL  + +      S+K L+   C  LE +PET         LD+SG   P
Sbjct: 656 CRNLQSMQA---VPSSVKLLSAQACSALETLPET---------LDLSGLQSP 695



 Score =  239 bits (611), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 198/577 (34%), Positives = 300/577 (51%), Gaps = 49/577 (8%)

Query: 531  LKFRE--FPEIVEHMEH-LSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
            LKFR   F + +E++ + L  L   G   R LP + +  + L+ LN+   +  +I   T 
Sbjct: 383  LKFRNVYFSQSLEYLSNELRYLKWYGYPFRNLPCTFQS-NELLELNMSYSQVEQIWEGT- 440

Query: 588  SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLS 646
                 L+ +KLS    L K P+  R +  L +L L+G   ++E+  SI +L +L LLNL 
Sbjct: 441  KQFNKLKIMKLSHSKNLVKTPDF-RGVPSLEKLVLEGCLELQEIDQSIGILERLALLNLK 499

Query: 647  DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYS 706
            DCK L  LP SI  LK+LK +NLSGC  L+ + E LG I+SLEELD+SGT V    S +S
Sbjct: 500  DCKKLSILPESIYGLKALKIVNLSGCSILDYMLEELGDIKSLEELDVSGTTVKQPFSSFS 559

Query: 707  Y---IPINLMR----KSVALKLPSLS----------GLCSLRKLNLTDCNLMEGALPSDI 749
            +   + I  +R    +  A+  P LS           L SL  L+L +CNL E  +P+D+
Sbjct: 560  HFKNLKILSLRGCSEQPPAIWNPHLSLLPGKGSNAMDLYSLMVLDLGNCNLQEETIPTDL 619

Query: 750  GNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCAS 809
              L SLKE  LS N+F+SLP S+  LSKL ++ L++C+ LQS+  +P +++ +    C++
Sbjct: 620  SCLSSLKEFCLSGNNFISLPASVCRLSKLEHLYLDNCRNLQSMQAVPSSVKLLSAQACSA 679

Query: 810  LVTLLDALKLCKSDSTMIACLDSLKLLGNK---SLAFSMLREYLEAVSNTRQHLSVVVPG 866
            L TL + L L    S      +  KL+ N+   ++ F MLR YL+ +SN +    +++PG
Sbjct: 680  LETLPETLDLSGLQSPRFNFTNCFKLVENQGCNNIGFMMLRNYLQGLSNPKPGFDIIIPG 739

Query: 867  SEIPEWFMYQNEGS-SITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGN------NCFGS 919
            SEIP+W  +Q+ G  SI++  P  ++   K +G+A+C V+ + +    N       CF  
Sbjct: 740  SEIPDWLSHQSLGDCSISIELPP-VWCDSKWMGFALCAVYVIYQEPALNFIDMDLTCFIK 798

Query: 920  YPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHV 979
               H   CH     +      +    GSD +WL +LSR   Y+  L ++       S+H 
Sbjct: 799  IKGHTW-CHELDYSFA-----EMELVGSDQVWLFFLSR---YEF-LGIDCQGVAKTSSHA 848

Query: 980  NVSFEPWLGQGLEVKMCGLHPVYMDEVEELDQTTNQPSRFTVYNLNEFDQHFVGSKMIVA 1039
             V F+   G GL VK  G+  VY  +V   +Q  +Q       NL    Q    S+ +V 
Sbjct: 849  EVMFKAH-GVGLYVKKFGVRLVYQQDVLVFNQKMDQICSSRNENLEVRHQDSDNSE-VVG 906

Query: 1040 TTSKRSLTEYFGAEASGS-GCCD-DEEPQPKRFRELE 1074
               KRS  E F  + S S G  + +EEP PKR +E++
Sbjct: 907  ALVKRSCIENFSNDVSESLGRSNFEEEPPPKRLKEID 943


>gi|357507539|ref|XP_003624058.1| TMV resistance protein N [Medicago truncatula]
 gi|355499073|gb|AES80276.1| TMV resistance protein N [Medicago truncatula]
          Length = 1127

 Score =  562 bits (1448), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 347/783 (44%), Positives = 487/783 (62%), Gaps = 58/783 (7%)

Query: 3   SRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK 62
           S+ E++  L+  G +DVR IGI GMGG+GKTTIAR VY+ I  EF+ + FL+NVREIS  
Sbjct: 199 SKVEEVNKLLGMGLNDVRFIGIWGMGGIGKTTIARAVYEAIQCEFQTTCFLENVREISEA 258

Query: 63  GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGN 122
            GLV +QRQLLS L  ++ N   N++DG   + + L RKKVLLV+DDV ++ QL++LAG 
Sbjct: 259 NGLVHIQRQLLSHL-SISRNDFHNLYDGKKTIQNSLCRKKVLLVLDDVNEINQLENLAGK 317

Query: 123 REWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQL 182
           ++WFG GSR+IIT+RD+H L THGV + Y+   L  +EAL +F +KAFK  +P +  + L
Sbjct: 318 QDWFGPGSRVIITTRDKHWLITHGVHQPYEVGMLFQNEALNVFCLKAFKGDKPQEGYLDL 377

Query: 183 SARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELE 242
           S  ++ YAGGLPLALEVLGS+L GRSVD W S ++ +   P  EI D L+IS++ L  +E
Sbjct: 378 SKEVVEYAGGLPLALEVLGSYLYGRSVDLWHSAIKNIRSAPLREIQDKLKISYESLDAME 437

Query: 243 KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH--NNTLWMHDLLQE 300
           K IFLDI+CFFKG  RD V N LE CG+HP I I+VLI++ LIT+   NN L MHDLLQE
Sbjct: 438 KNIFLDISCFFKGMKRDKVINILENCGYHPEITIQVLIDRSLITLDRVNNKLGMHDLLQE 497

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G+ IV ++SP + GKRSRLW +E++  VLT++ GTE +  +VL++       +   S +
Sbjct: 498 MGRNIVIQESPNDPGKRSRLWSKEDIDRVLTKNKGTEKISSVVLNSLQPYEARW---STE 554

Query: 361 AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
           AFS  T ++LL +  + LP GL  L + L++L WRG PLK L    Q+D+ ++I + +S+
Sbjct: 555 AFSMATQIKLLSLNEVHLPLGLSCLPSSLKVLRWRGCPLKTLAQTNQLDEVVDIKLSHSQ 614

Query: 421 IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
           +  LW+GI  ++ LK + L  S+NL R+PDF G PNLEKLIL+GC  L E+HPSL+ HNK
Sbjct: 615 LELLWQGINFMENLKYLNLKFSKNLKRLPDFYGVPNLEKLILKGCASLTEVHPSLVHHNK 674

Query: 481 LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
           ++++N++DC SL  LP K+ M SL++L L                  SG  +F+  PE  
Sbjct: 675 VVLVNLEDCKSLEALPEKLEMSSLKELIL------------------SGCCEFKFLPEFG 716

Query: 541 EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
           E ME+LS L L+GTA+R L  S+  L GL  LNLK+C+SL  LP T+  L  LR L +SG
Sbjct: 717 ESMENLSILALQGTALRNLTSSLGRLVGLTDLNLKDCKSLVCLPDTIHGLNSLRVLDISG 776

Query: 601 CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV-------- 652
           CSKL + P+ ++ +K L EL  + TSI E+     L   L++L+ + CK  +        
Sbjct: 777 CSKLCRLPDGLKEIKCLEELHANDTSIDEL---YRLPDSLKVLSFAGCKGTLAKSMNRFI 833

Query: 653 ---------------RLPSSIIALKSLKTLNLSGC-FKLENVPETLGQIESLEELDISG- 695
                          R P S   L SLK +NLS C    E++P    Q+ SL  LD++G 
Sbjct: 834 PFNRMRASQPAPTGFRFPHSAWNLPSLKHINLSYCDLSEESIPHYFLQLTSLVSLDLTGN 893

Query: 696 --TAVPHSTSWYSYIPINLMRKSVALK-LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNL 752
               +P S S  S + +  +     L+ LP L    S+ +L+ ++C+ +E     D    
Sbjct: 894 NFVTIPSSISELSKLELLTLNCCEKLQLLPELPP--SIMQLDASNCDSLETP-KFDPAKP 950

Query: 753 CSL 755
           CSL
Sbjct: 951 CSL 953


>gi|51477388|gb|AAU04761.1| MRGH13 [Cucumis melo]
          Length = 1024

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 338/808 (41%), Positives = 488/808 (60%), Gaps = 69/808 (8%)

Query: 4   RCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKG 63
           R  ++  L+  G  DVR +GI GMGG+GKTT+AR++Y  +SH F+   FLDNV+E   K 
Sbjct: 222 RLHQINMLLGIGLDDVRFVGIWGMGGIGKTTLARIIYKSVSHLFDGCYFLDNVKEALKKE 281

Query: 64  GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNR 123
            + SLQ++L++  L   +  I N  DG  ++  R+ + K L+++DDV  + QLQ LAG  
Sbjct: 282 DIASLQQKLITGTLMKRNIDIPNA-DGATLIKRRISKIKALIILDDVNHLSQLQKLAGGL 340

Query: 124 EWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLS 183
           +WFGSGSR+I+T+RDEHLL +HG++  Y    L  +E LQLF+ KAF    P +E   L 
Sbjct: 341 DWFGSGSRVIVTTRDEHLLISHGIERRYNVEVLKIEEGLQLFSQKAFGEEHPKEEYFDLC 400

Query: 184 ARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEK 243
           ++++ YAGGLPLA+EVLGS L  + +++W + +E+L      EI++ L+IS+  L+E E+
Sbjct: 401 SQVVNYAGGLPLAIEVLGSSLHNKPMEDWINAVEKLWEVRDKEIIEKLKISYYMLEESEQ 460

Query: 244 KIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQ 303
           KIFLDIACFFK   ++     LE  GF  V+G+ +L EKCLIT  ++ L +HDL+QE+GQ
Sbjct: 461 KIFLDIACFFKRKSKNQAIEILESFGFPAVLGLEILEEKCLITAPHDKLQIHDLIQEMGQ 520

Query: 304 QIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFS 363
           +IV+   P E  KR+RLW  E++   L+   GTE +EGI++D +  E E +L  +AKAFS
Sbjct: 521 EIVRHTFPNEPEKRTRLWLREDINLALSRDQGTEAIEGIMMD-FDEEGESHL--NAKAFS 577

Query: 364 KMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGE 423
            MTNLR+LK+ N+ L   +EYLS++LR L W GYPLK LPSN      +E+ +  S I  
Sbjct: 578 SMTNLRVLKLNNVHLCEEIEYLSDQLRFLNWHGYPLKTLPSNFNPTNLLELELPNSSIHL 637

Query: 424 LWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLII 483
           LW   K ++ LKV+ LS S+ L + PDF+  PNLE+L+L GC  L+++H SL     LI 
Sbjct: 638 LWTTSKSMETLKVINLSDSQFLSKTPDFSVVPNLERLVLSGCVELHQLHHSLGNLKHLIQ 697

Query: 484 LNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHM 543
           L++++C  L  +P  I ++SL+ L        +SG   L+            FP+I  +M
Sbjct: 698 LDLRNCKKLTNIPFNICLESLKIL-------VLSGCSSLT-----------HFPKISSNM 739

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            +L ELHLE T+I+ L  SI  L+ LV+LNLKNC +L  LP T+ +L  L++L L+GCS+
Sbjct: 740 NYLLELHLEETSIKVLHSSIGHLTSLVVLNLKNCTNLLKLPSTIGSLTSLKTLNLNGCSE 799

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
           L   PE + ++  L +L +  T + + P S +LLTKLE+LN   C+ L R       L S
Sbjct: 800 LDSLPESLGNISSLEKLDITSTCVNQAPMSFQLLTKLEILN---CQGLSRK-----FLHS 851

Query: 664 L-KTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
           L  T N +  F + +                 G  V   T+W+++               
Sbjct: 852 LFPTWNFTRKFTIYS----------------QGLKV---TNWFTFG-------------- 878

Query: 723 SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIE 782
                CSLR LNL+DCNL +G LP+D+ +L SL+ L+LSKN F  LP SI HL  L ++ 
Sbjct: 879 -----CSLRILNLSDCNLWDGDLPNDLRSLASLQILHLSKNHFTKLPESICHLVNLRDLF 933

Query: 783 LEDCKRLQSLPQLPPNIRQVRVNGCASL 810
           L +C  L SLP+LP ++R+V    C SL
Sbjct: 934 LVECFHLLSLPKLPLSVREVDAKDCVSL 961


>gi|224116168|ref|XP_002331978.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832102|gb|EEE70579.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1028

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 320/688 (46%), Positives = 432/688 (62%), Gaps = 48/688 (6%)

Query: 27  MGGLGKTTIARVVYDLISHEFEASGFLDNVREI-SSKGGLVSLQRQLLSQLLKLADNSIW 85
           MGG+GKTT+ARVVYD    +F+ S FL NVRE+   K G   LQ QL+S++L    N I 
Sbjct: 1   MGGIGKTTVARVVYDRFRWQFKGSCFLANVREVFDEKDGPRRLQEQLVSEILMKRAN-IC 59

Query: 86  NVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTH 145
           +   GI+M+  +LQRKK+L+V+DDV D KQL+SLA   +WFG GSRIIITSRD  +L  +
Sbjct: 60  DSSRGIEMIKRKLQRKKILIVLDDVDDRKQLESLAAESKWFGPGSRIIITSRDRQVLTRN 119

Query: 146 GVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLS 205
           GV  +Y+   LN D+AL LF+ KAFK  QP ++ V+LS +++ YA GLPLALEV+GSF+ 
Sbjct: 120 GVARIYEAEKLNDDDALMLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFMH 179

Query: 206 GRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFL 265
           GRS+ EW S + RL   P  EI+D+L+ISFDGL ELEKKIFLDIACF KG  +D +   L
Sbjct: 180 GRSILEWGSAINRLNEIPDREIIDVLRISFDGLHELEKKIFLDIACFLKGFKKDRIIRIL 239

Query: 266 EGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEE 325
           + CGFH  IG +VLIEK LI+V  + +WMH+LLQ +G++IV+ +SPEE G+RSRLW  E+
Sbjct: 240 DSCGFHAHIGTQVLIEKSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYED 299

Query: 326 VCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYL 385
           VC  L ++TG E +E I LD    +   +   + KAFSKM+ LRLLKI N+QL  G E L
Sbjct: 300 VCLALMDNTGKEKIEAIFLDIPGIKEAQW---NMKAFSKMSKLRLLKINNVQLSEGPEDL 356

Query: 386 SNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENL 445
           SN+LR L W  YP K LP+ LQ+D+ +E++M  S I +LW G K   KLK++ LS+S  L
Sbjct: 357 SNKLRFLEWHSYPSKSLPAGLQVDELVELHMANSSIEQLWYGYKSAVKLKIINLSNSLYL 416

Query: 446 IRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLE 505
            + PD TG PNLE LILEGC  L E+HPSL  H KL  +N+ +C S+  LP  + M+SL+
Sbjct: 417 SKSPDLTGIPNLESLILEGCISLSEVHPSLGRHKKLQYVNLINCRSIRILPSNLEMESLK 476

Query: 506 KLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIEL 565
                             TLD  G  K   FP+IV +M  L +L L+ T I  L  SI  
Sbjct: 477 ----------------FFTLD--GCSKLENFPDIVGNMNCLMKLCLDRTGIAELSPSIRH 518

Query: 566 LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT 625
           + GL +L++ NC+ LE +  ++  LK L+ L LSGCS+LK  P  +  ++ L E  + GT
Sbjct: 519 MIGLEVLSMNNCKKLESISRSIECLKSLKKLDLSGCSELKNIPGNLEKVESLEEFDVSGT 578

Query: 626 SIKEVPSSIELLTKLELLNLSDCK-------------------------NLVRLPSSIIA 660
           SI+++P+SI LL  L +L+L   +                         N V LP SI  
Sbjct: 579 SIRQLPASIFLLKNLAVLSLDGLRACNLRALPEDIGCLSSLKSLDLSRNNFVSLPRSINQ 638

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESL 688
           L  L+ L L  C  LE++ E   +++++
Sbjct: 639 LSGLEKLVLEDCTMLESLLEVPSKVQTV 666



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 201/569 (35%), Positives = 292/569 (51%), Gaps = 86/569 (15%)

Query: 477  LHNKLIILNMKDCTSLITLPGKILMKSLEKLNL--KSLPTTISGLKC---LSTLDVSGDL 531
            L NKL  L      S  +LP  + +  L +L++   S+     G K    L  +++S  L
Sbjct: 356  LSNKLRFLEWHSYPSK-SLPAGLQVDELVELHMANSSIEQLWYGYKSAVKLKIINLSNSL 414

Query: 532  KFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
               + P++   + +L  L LEG  ++  +  S+     L  +NL NCRS+ ILP  +  +
Sbjct: 415  YLSKSPDLT-GIPNLESLILEGCISLSEVHPSLGRHKKLQYVNLINCRSIRILPSNL-EM 472

Query: 591  KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKN 650
            + L+   L GCSKL+ FP+IV +M  L +L LD T I E+  SI  +  LE+L++++CK 
Sbjct: 473  ESLKFFTLDGCSKLENFPDIVGNMNCLMKLCLDRTGIAELSPSIRHMIGLEVLSMNNCKK 532

Query: 651  LVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPI 710
            L  +  SI  LKSLK L+LSGC +L+N+P  L ++ESLEE D+SGT++    +      I
Sbjct: 533  LESISRSIECLKSLKKLDLSGCSELKNIPGNLEKVESLEEFDVSGTSIRQLPA-----SI 587

Query: 711  NLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPT 770
             L++    L L  L   C+LR            ALP DIG L SLK L LS+N+FVSLP 
Sbjct: 588  FLLKNLAVLSLDGLRA-CNLR------------ALPEDIGCLSSLKSLDLSRNNFVSLPR 634

Query: 771  SITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACL 830
            SI  LS L  + LEDC  L+SL ++P  ++ V +NGC SL T+ D +KL  S  +   CL
Sbjct: 635  SINQLSGLEKLVLEDCTMLESLLEVPSKVQTVNLNGCISLKTIPDPIKLSSSQRSEFMCL 694

Query: 831  DSLKLL---GNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRP 887
            D  +L    G  S+   ML  YL+ +SN R    +VVPG+EIP WF +Q++ SSI+V  P
Sbjct: 695  DCWELYEHNGQDSMGSIMLERYLQGLSNPRPGFRIVVPGNEIPGWFNHQSKESSISVQVP 754

Query: 888  SNLYNKKKLVGYAICCVF----------HVLKNSRGNNCFGSYPTHQ-LNCHIGHGIYGI 936
            S        +G+  C  F          H   N R N     YP+   L+C +       
Sbjct: 755  S------WSMGFVACVAFSAYGESPLFCHFKANGREN-----YPSPMCLSCKV------- 796

Query: 937  GFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMC 996
                      SDH+WL YLS     +++     +      +++ +SF  +  +G++VK C
Sbjct: 797  --------LFSDHIWLFYLSFDYLKELKEWQHGSF-----SNIELSFHSY-ERGVKVKNC 842

Query: 997  G---LHPVYMDEVEELDQTTNQPSR-FTV 1021
            G   L  VY+         T QPS  FTV
Sbjct: 843  GVCLLSSVYI---------TPQPSALFTV 862


>gi|224105385|ref|XP_002333825.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838630|gb|EEE76995.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 920

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 355/857 (41%), Positives = 494/857 (57%), Gaps = 106/857 (12%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-I 59
           +DSR + L   +         IGICGMGGLGKTT+ARVVYD I  +FE S FL NV+E  
Sbjct: 137 IDSRLQVLNGYIGEEVGKAIFIGICGMGGLGKTTVARVVYDRIRWQFEGSCFLANVKEDF 196

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           + + G   LQ QLLS++L +   S+W+ + GI+M+  RL+ KK+LL++DDV + +QL+ L
Sbjct: 197 AREDGPRRLQEQLLSEIL-MERASVWDSYRGIEMIKRRLRLKKILLILDDVDEKEQLEFL 255

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           A   +WFG GSRIIITSRD+ +L  +GV  +Y+   LN D+AL LF+ KAFK  QP ++ 
Sbjct: 256 AAESKWFGPGSRIIITSRDKQVLTRNGVARIYEAEKLNDDDALTLFSQKAFKNDQPAEDF 315

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V+LS +++ YA GLPLALEV+GSF+ GRS+ EW S + RL   P  EI+D+L+ISFDGL 
Sbjct: 316 VELSKQVVGYATGLPLALEVIGSFMHGRSILEWGSAINRLNDIPDREIIDVLRISFDGLH 375

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           E +KKIFLDIACF  G   D +T  LE  GF+  IGI VLIE+ LI+V  + +WMH+LLQ
Sbjct: 376 ESDKKIFLDIACFLMGFKIDRITRILESRGFNAGIGISVLIERSLISVSRDQVWMHNLLQ 435

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
            +G++IV+ +SPEE G+RSRLW  ++VC  L ++TG E +E I LD    +   +   + 
Sbjct: 436 IMGKEIVRCESPEEPGRRSRLWTYKDVCLALMDNTGKEKIEAIFLDMPGIKEAQW---NM 492

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           KAFSKM+ LRLLKI N+QL  G E LSN LR L W  YP K LP+  QMD+ +E++M  S
Sbjct: 493 KAFSKMSRLRLLKIHNVQLSEGPEALSNELRFLEWNSYPSKSLPACFQMDELVELHMANS 552

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
            I +LW G K    LK++ LS+S NLI+ PD TG  NLE LILEGCT L E+HPSL  H 
Sbjct: 553 SIEQLWYGYKSAVNLKIINLSNSLNLIKTPDLTGILNLESLILEGCTSLSEVHPSLAHHK 612

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
           KL  +N+  C S+  LP  + M+SL+                + TLD  G  K  +FP+I
Sbjct: 613 KLQYVNLVKCKSIRILPNNLEMESLK----------------VCTLD--GCSKLEKFPDI 654

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
           V +M  L+ L L+ T I  L  SI  L GL LL++ +C++LE +P ++  LK L+ L LS
Sbjct: 655 VGNMNCLTVLCLDETGITKLCSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLS 714

Query: 600 GCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSII 659
           GCS+LK  PE +  ++ L E  + GTSI+++P+SI LL  L++L+   C+ + +LPS   
Sbjct: 715 GCSELKYIPENLGKVESLEEFDVSGTSIRQLPASIFLLKNLKVLSSDGCERIAKLPS--- 771

Query: 660 ALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVAL 719
                     SG   LE                    A+P    + S +    + ++   
Sbjct: 772 ---------YSGLCYLEG-------------------ALPEDIGYSSSLRSLDLSQNNFG 803

Query: 720 KLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
            LP S++ L  L  L L DC ++E                        SLP         
Sbjct: 804 SLPKSINQLSELEMLVLKDCRMLE------------------------SLP--------- 830

Query: 779 LNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLL-- 836
                          ++P  ++ V +NGC  L  + D ++L  S  +   CL+ L+L   
Sbjct: 831 ---------------EVPSKVQTVNLNGCIRLKEIPDPIELSSSKISEFICLNCLELYDH 875

Query: 837 -GNKSLAFSMLREYLEA 852
            G  S+  +ML  YL+ 
Sbjct: 876 NGQDSMGLTMLERYLQV 892


>gi|105922680|gb|ABF81430.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1282

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 308/627 (49%), Positives = 416/627 (66%), Gaps = 25/627 (3%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           +DSR E L   +     +   IGICGMGGLGKTT+ARVVYD I  +FE S FL NVRE+ 
Sbjct: 236 IDSRLEVLNGYIGEEVGEAIFIGICGMGGLGKTTVARVVYDRIRWQFEGSCFLANVREVF 295

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           + K G   LQ QLLS++L +   S+ +   GI+M+  R QRKK+L+V+DDV D KQL+SL
Sbjct: 296 AEKDGPRRLQEQLLSEIL-MERASVCDSSRGIEMIKRRSQRKKILVVLDDVDDHKQLESL 354

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           A   +WFG GSRIIITSRD+ +L  +GV  +Y+   LN D+AL LF+ KAF+  QP ++ 
Sbjct: 355 AAESKWFGPGSRIIITSRDKQVLTRNGVARIYEAEKLNDDDALMLFSQKAFENDQPAEDF 414

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           + LS +++ YA GLPLALEV+GSFL GRS+ EWR  + R+   P  EI+ +L +SFDGL 
Sbjct: 415 LDLSKQVVGYANGLPLALEVIGSFLHGRSIPEWRGAINRMNEIPDHEIIKVLLVSFDGLH 474

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           ELEKKIFLDIACF KG   D +T  L+G GFH  IGI VLIE+ LI+V  + +WMH+LLQ
Sbjct: 475 ELEKKIFLDIACFLKGFKIDRITRILDGRGFHASIGIPVLIERSLISVSRDQVWMHNLLQ 534

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           ++G++I++R+SPEE G+RSRLW  ++VC  L ++ G E +E I LD    +   +   + 
Sbjct: 535 KMGKEIIRRESPEEPGRRSRLWTYKDVCLALMDNIGKEKIEAIFLDMPGIKEAQW---NM 591

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           +AFSKM+ LRLLKI N+QL  G E LSN+LR L W  YP K LP++LQ+D+ +E++M  S
Sbjct: 592 EAFSKMSRLRLLKINNVQLSEGPEDLSNKLRFLEWHSYPSKSLPASLQVDELVELHMANS 651

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
            I +LW G K    LK++ LS+S NL + P+ TG PNLE LILEGCT L E+HPSL LH 
Sbjct: 652 SIEQLWYGCKSAINLKIINLSNSLNLSKTPNLTGIPNLESLILEGCTSLSEVHPSLALHK 711

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
           KL  +N+ +C S+  LP  + M+SL+                + TLD  G  K  +FP+I
Sbjct: 712 KLQHVNLVNCKSIRILPNNLEMESLK----------------VCTLD--GCSKLEKFPDI 753

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
           + +M  L  L L+ T+I  LP SI  L GL LL++ +C++LE +P ++  LK L+ L LS
Sbjct: 754 IGNMNCLMVLRLDETSITKLPSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLS 813

Query: 600 GCSKLKKFPEIVRSMKDLSELFLDGTS 626
           GCS+LK  PE +  ++ L E   DG S
Sbjct: 814 GCSELKCIPENLGKVESLEE--FDGLS 838



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/262 (37%), Positives = 148/262 (56%), Gaps = 21/262 (8%)

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNL--KSLPTTISGLKC---LSTLDVSGDL 531
           L NKL  L      S  +LP  + +  L +L++   S+     G K    L  +++S  L
Sbjct: 617 LSNKLRFLEWHSYPSK-SLPASLQVDELVELHMANSSIEQLWYGCKSAINLKIINLSNSL 675

Query: 532 KFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
              + P +   + +L  L LEG T++  +  S+ L   L  +NL NC+S+ ILP  +  +
Sbjct: 676 NLSKTPNLT-GIPNLESLILEGCTSLSEVHPSLALHKKLQHVNLVNCKSIRILPNNLE-M 733

Query: 591 KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKN 650
           + L+   L GCSKL+KFP+I+ +M  L  L LD TSI ++PSSI  L  L LL+++ CKN
Sbjct: 734 ESLKVCTLDGCSKLEKFPDIIGNMNCLMVLRLDETSITKLPSSIHHLIGLGLLSMNSCKN 793

Query: 651 LVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD-------ISGTAVPHST- 702
           L  +PSSI  LKSLK L+LSGC +L+ +PE LG++ESLEE D         G AVP +  
Sbjct: 794 LESIPSSIGCLKSLKKLDLSGCSELKCIPENLGKVESLEEFDGLSNPRPGFGIAVPGNEI 853

Query: 703 -SWYSYIPINLMRKSVALKLPS 723
             W+++        S+++++PS
Sbjct: 854 PGWFNH---RSKGSSISVQVPS 872



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 178/399 (44%), Gaps = 89/399 (22%)

Query: 614 MKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCF 673
           + +L EL +  +SI+++    +    L+++NLS+  NL + P+ +  + +L++L L GC 
Sbjct: 640 VDELVELHMANSSIEQLWYGCKSAINLKIINLSNSLNLSKTPN-LTGIPNLESLILEGCT 698

Query: 674 KLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKL 733
            L  V  +L   + L+ +++                     KS+ + LP+   + SL+  
Sbjct: 699 SLSEVHPSLALHKKLQHVNLVNC------------------KSIRI-LPNNLEMESLKVC 739

Query: 734 NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
            L  C+ +E   P  IGN+  L  L L + S   LP+SI HL  L  + +  CK L+S+P
Sbjct: 740 TLDGCSKLE-KFPDIIGNMNCLMVLRLDETSITKLPSSIHHLIGLGLLSMNSCKNLESIP 798

Query: 794 Q---LPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYL 850
                  +++++ ++GC+ L  + + L   +S                         E  
Sbjct: 799 SSIGCLKSLKKLDLSGCSELKCIPENLGKVES------------------------LEEF 834

Query: 851 EAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF----- 905
           + +SN R    + VPG+EIP WF ++++GSSI+V  PS        +G+  C  F     
Sbjct: 835 DGLSNPRPGFGIAVPGNEIPGWFNHRSKGSSISVQVPSG------RMGFFACVAFNANDE 888

Query: 906 ------HVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQT 959
                 H   N R N     YP+             I F    G   SDH+WL YLS   
Sbjct: 889 SPSLFCHFKANGREN-----YPSPMC----------INFE---GHLFSDHIWLFYLSFDY 930

Query: 960 CYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGL 998
             +++   E   E F  +++ +SF  +  QG++V  CG+
Sbjct: 931 LKELQ---EWQHESF--SNIELSFHSY-EQGVKVNNCGV 963


>gi|51477390|gb|AAU04763.1| MRGH8 [Cucumis melo]
          Length = 1058

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 334/806 (41%), Positives = 488/806 (60%), Gaps = 77/806 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +  R  ++  L+  G  D+R +GI GMGG+GKTT+AR++Y  +SH F+   FLDNV+E  
Sbjct: 228 ISQRLHQINMLLGIGLDDIRFVGIWGMGGIGKTTLARIIYRSVSHLFDGCYFLDNVKEAL 287

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            K G+ SLQ +LL+  L   +  I N  DG  ++  R+   K L+++DDV  + QLQ LA
Sbjct: 288 KKQGIASLQEKLLTGALMKRNIDIPNA-DGATLIKRRISNIKALIILDDVDHLSQLQQLA 346

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G+ +WFGSGSRII+T+R+EHLL +HG+++ YK  GLN +EALQLF+ KAF T  P ++  
Sbjct: 347 GSSDWFGSGSRIIVTTRNEHLLVSHGIEKRYKVEGLNVEEALQLFSQKAFGTNYPKKDYF 406

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            LS +++ Y+G LPLA+EVLGS L  +S + W++ +E+L+     +IL+IL++S+D L +
Sbjct: 407 DLSIQVVEYSGDLPLAIEVLGSSLRDKSREVWKNAVEKLKEIRDKKILEILRVSYDLLDK 466

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            EK+IFLD+ACFFK   +      L+  GF  +IG+ +L E+ LIT  +  + MHDL+QE
Sbjct: 467 SEKEIFLDLACFFKKKSKKQAIEVLQSFGFQAIIGLEILEERSLITTPHEKIQMHDLIQE 526

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +GQ++V+R  P    KR+RLW  E+V   L+   G E +EGIV+D+   E E +L  +AK
Sbjct: 527 MGQEVVRRMFPNNPEKRTRLWLREDVNLALSHDQGAEAIEGIVMDS-SEEGESHL--NAK 583

Query: 361 AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
            FS MTNLR+LKI N+ L   L+YLS++LR L W GYP K+LP N      +E+ +  S 
Sbjct: 584 VFSTMTNLRILKINNVSLCGELDYLSDQLRFLSWHGYPSKYLPPNFHPKSILELELPNSF 643

Query: 421 IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
           I  LWKG K LD+LK + LS S+ + + PDF+G PNLE+LIL GC RL ++H SL    +
Sbjct: 644 IHYLWKGSKRLDRLKTVNLSDSQFISKTPDFSGVPNLERLILSGCVRLTKLHQSLGSLKR 703

Query: 481 LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
           LI L++K+C +                 LK++P +IS L+ L  L +S     + FP IV
Sbjct: 704 LIQLDLKNCKA-----------------LKAIPFSIS-LESLIVLSLSNCSSLKNFPNIV 745

Query: 541 EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
            +M++L+ELHL+GT+I+ L  SI  L+GLVLLNL+NC +L  LP T+ +L CL++L L G
Sbjct: 746 GNMKNLTELHLDGTSIQELHPSIGHLTGLVLLNLENCTNLLELPNTIGSLICLKTLTLHG 805

Query: 601 CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVR------L 654
           CSKL + PE +  +  L +L +  T I + P S++LLT LE+L   DC+ L R       
Sbjct: 806 CSKLTRIPESLGFIASLEKLDVTNTCINQAPLSLQLLTNLEIL---DCRGLSRKFIHSLF 862

Query: 655 PSSI-------IALK---------SLKTLNLSGC-FKLENVPETLGQIESLEELDISGTA 697
           PS         + LK         S+K LNLS C  K  ++P+ L  + SLE LD+SG +
Sbjct: 863 PSWNSSSYSSQLGLKFTYCLSSFCSMKKLNLSDCSLKDGDIPDNLQSLPSLEILDLSGNS 922

Query: 698 VPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLME--GALPSDIGNL--- 752
                  +S++P             S+  L +LR L L +C  ++    LP  + ++   
Sbjct: 923 -------FSFLP------------KSVEHLVNLRTLYLVNCKRLQELPKLPLSVRSVEAR 963

Query: 753 --CSLKELYLSKNSFVSLPTSITHLS 776
              SLKE Y   N    +P+S T ++
Sbjct: 964 DCVSLKEYY---NQEKQMPSSSTGMA 986



 Score =  196 bits (498), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 127/289 (43%), Positives = 174/289 (60%), Gaps = 25/289 (8%)

Query: 566 LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT 625
           L  L+ L+LKNC++L+ +P ++S L+ L  L LS CS LK FP IV +MK+L+EL LDGT
Sbjct: 701 LKRLIQLDLKNCKALKAIPFSIS-LESLIVLSLSNCSSLKNFPNIVGNMKNLTELHLDGT 759

Query: 626 SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI 685
           SI+E+  SI  LT L LLNL +C NL+ LP++I +L  LKTL L GC KL  +PE+LG I
Sbjct: 760 SIQELHPSIGHLTGLVLLNLENCTNLLELPNTIGSLICLKTLTLHGCSKLTRIPESLGFI 819

Query: 686 ESLEELDISGTAV---PHSTSWYSYIPI----NLMRKSVALKLPS--------------- 723
            SLE+LD++ T +   P S    + + I     L RK +    PS               
Sbjct: 820 ASLEKLDVTNTCINQAPLSLQLLTNLEILDCRGLSRKFIHSLFPSWNSSSYSSQLGLKFT 879

Query: 724 --LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNI 781
             LS  CS++KLNL+DC+L +G +P ++ +L SL+ L LS NSF  LP S+ HL  L  +
Sbjct: 880 YCLSSFCSMKKLNLSDCSLKDGDIPDNLQSLPSLEILDLSGNSFSFLPKSVEHLVNLRTL 939

Query: 782 ELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACL 830
            L +CKRLQ LP+LP ++R V    C SL    +  K   S ST +A +
Sbjct: 940 YLVNCKRLQELPKLPLSVRSVEARDCVSLKEYYNQEKQMPSSSTGMAVI 988


>gi|105922722|gb|ABF81433.1| TIR-NBS-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1446

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 343/839 (40%), Positives = 482/839 (57%), Gaps = 101/839 (12%)

Query: 50   SGFLDNVRE-ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVID 108
            S FL+NVRE  + K G   LQ QLLS++L +   S+W+ + GI+M+  R + KK+L ++D
Sbjct: 277  SCFLENVREDFAKKDGPRRLQEQLLSEIL-MERASVWDSYRGIEMIKRRSRLKKILHILD 335

Query: 109  DVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMK 168
            DV D KQL+  A    WFG GSRIIITSRD ++L  +   ++Y+   LN D+AL LF+ K
Sbjct: 336  DVDDKKQLEFFAAEPGWFGPGSRIIITSRDTNVLTGNDDTKIYEAEKLNDDDALMLFSQK 395

Query: 169  AFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEIL 228
            AFK  QP ++ V+LS +++ YA GLPLA+EV+GSFL  RS+ EWR  + R+   P  +I+
Sbjct: 396  AFKNDQPDEDFVELSKQVVGYANGLPLAIEVIGSFLYARSIPEWRGAINRMNEIPDGKII 455

Query: 229  DILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH 288
            D+L+ISFDGL E +KKIFLDIACF  G   D +T  LE  GFH  IGI VLIE+ LI+V 
Sbjct: 456  DVLRISFDGLHESDKKIFLDIACFLMGFKIDRITRILESRGFHAGIGIPVLIERSLISVS 515

Query: 289  NNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYH 348
             + +WMH+LLQ +G++IV+ +SPEE G+RSRLW  E+VC  L +STG E +E I LD   
Sbjct: 516  RDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYEDVCLALMDSTGKEKIEAIFLDMPG 575

Query: 349  HENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQM 408
             +   +   + +AFSKM+ LRLLKI N+QL  G E LSN+LR L W  YP K LP+ LQ+
Sbjct: 576  IKEAQW---NMEAFSKMSKLRLLKINNVQLSEGPEDLSNKLRFLEWHSYPSKSLPAGLQV 632

Query: 409  DKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
            D+ +E++M  SRI +LW G K    LK++ LS+S NLI+  DFT  PNLE LILEGCT L
Sbjct: 633  DELVELHMANSRIEQLWYGCKSAVNLKIINLSNSLNLIKTLDFTRIPNLENLILEGCTSL 692

Query: 469  YEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVS 528
             E+HPSL  H KL  + + DC S+  LP  + M+SL+                +  LD  
Sbjct: 693  SEVHPSLARHKKLEYVTLMDCVSIRILPSNLEMESLK----------------VCILD-- 734

Query: 529  GDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS 588
            G  K  +FP+IV +M  L+ LHL+ T I  L  SI  L GL +L++ NC++LE +P ++ 
Sbjct: 735  GCSKLEKFPDIVGNMNKLTVLHLDETGITKLSSSIHHLIGLEVLSMNNCKNLESIPSSIR 794

Query: 589  NLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDC 648
             LK L+ L LSGCS+L+  P+ +  ++ L E+ + GTSI++ P+SI LL  L++L+L  C
Sbjct: 795  CLKSLKKLDLSGCSELQNIPQNLGKVEGLEEIDVSGTSIRQPPASIFLLKSLKVLSLDGC 854

Query: 649  KNLV------RLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHST 702
            K +       RLP S+  L SL+ L+L  C                   ++   A+P   
Sbjct: 855  KRIAVNPTGDRLP-SLSGLCSLEVLDLCAC-------------------NLREGALPEDI 894

Query: 703  SWYSYIPINLMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLS 761
               S +    + ++  + LP S++ L  L  L L DC ++E                   
Sbjct: 895  GCLSSLKSLDLSQNNFVSLPESINQLSGLEMLVLEDCRMLE------------------- 935

Query: 762  KNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCK 821
                                         SLP++P  ++ V +NGC  L  + D +KL  
Sbjct: 936  -----------------------------SLPEVPSKVQTVNLNGCIRLKEIPDPIKLSS 966

Query: 822  SDSTMIACLDSLKLL---GNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQN 877
            S  +   CL+   L    G  S   +ML  YL+ + N R    + VPG+EIP WF +QN
Sbjct: 967  SKRSEFICLNCWALYEHNGQDSFGLTMLERYLKGLPNPRPGFGIAVPGNEIPGWFNHQN 1025



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 215/493 (43%), Gaps = 46/493 (9%)

Query: 530  DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSN 589
            +++  E PE + +     E H      + LP  +++   LV L++ N R +E L     +
Sbjct: 599  NVQLSEGPEDLSNKLRFLEWH--SYPSKSLPAGLQV-DELVELHMANSR-IEQLWYGCKS 654

Query: 590  LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDC 648
               L+ + LS    L K  +  R + +L  L L+G TS+ EV  S+    KLE + L DC
Sbjct: 655  AVNLKIINLSNSLNLIKTLDFTR-IPNLENLILEGCTSLSEVHPSLARHKKLEYVTLMDC 713

Query: 649  KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH-STSWYSY 707
             ++  LPS++  ++SLK   L GC KLE  P+ +G +  L  L +  T +   S+S +  
Sbjct: 714  VSIRILPSNL-EMESLKVCILDGCSKLEKFPDIVGNMNKLTVLHLDETGITKLSSSIHHL 772

Query: 708  IPINLMRKSVALKLPSLSG----LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKN 763
            I + ++  +    L S+      L SL+KL+L+ C+ ++  +P ++G +  L+E+ +S  
Sbjct: 773  IGLEVLSMNNCKNLESIPSSIRCLKSLKKLDLSGCSELQN-IPQNLGKVEGLEEIDVSGT 831

Query: 764  SFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSD 823
            S    P SI  L  L  + L+ CKR+   P      R   ++G  SL    + L LC  +
Sbjct: 832  SIRQPPASIFLLKSLKVLSLDGCKRIAVNPT---GDRLPSLSGLCSL----EVLDLCACN 884

Query: 824  ------STMIACLDSLKLLGNKSLAFSMLREYLEAVSNTR----QHLSVVVPGSEIPEWF 873
                     I CL SLK L      F  L E +  +S       +   ++    E+P   
Sbjct: 885  LREGALPEDIGCLSSLKSLDLSQNNFVSLPESINQLSGLEMLVLEDCRMLESLPEVPSKV 944

Query: 874  MYQNEGSSI---TVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFG-----SYPTHQL 925
               N    I    +  P  L + K+     IC     L    G + FG      Y     
Sbjct: 945  QTVNLNGCIRLKEIPDPIKLSSSKR--SEFICLNCWALYEHNGQDSFGLTMLERYLKGLP 1002

Query: 926  NCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEP 985
            N   G GI   G          +H+WL YLS     +++   E   E F  +++ +SF  
Sbjct: 1003 NPRPGFGIAVPGNEIPGWFNHQNHIWLFYLSFDHLKELK---EWKHESF--SNIELSFRS 1057

Query: 986  WLGQGLEVKMCGL 998
                G++VK CG+
Sbjct: 1058 -CQPGVKVKNCGV 1069


>gi|105922867|gb|ABF81441.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
 gi|105922933|gb|ABF81445.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1378

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 331/714 (46%), Positives = 445/714 (62%), Gaps = 48/714 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           MDSR E L   +     +   IGICGMGG+GKTT+ARVVYD    +F+ S FL NVRE+ 
Sbjct: 259 MDSRLEILNGYIGEEVGEAIFIGICGMGGIGKTTVARVVYDRFRWQFKGSCFLANVREVF 318

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
             K G   LQ QL+S++L    N I +   GI+M+  +LQRKK+L+V+DDV D KQL+SL
Sbjct: 319 DEKDGPRRLQEQLVSEILMKRAN-ICDSSRGIEMIKRKLQRKKILIVLDDVDDRKQLESL 377

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           A   +WFG GSRIIITSRD  +L  +GV  +Y+   LN D+AL LF+ KAFK  QP ++ 
Sbjct: 378 AAESKWFGPGSRIIITSRDRQVLTRNGVARIYEAEKLNDDDALMLFSQKAFKNDQPAEDF 437

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V+LS +++ YA GLPLALEV+GSF+ GRS+ EW S + RL   P  EI+D+L+ISFDGL 
Sbjct: 438 VELSKQVVGYANGLPLALEVIGSFMHGRSILEWGSAINRLNEIPDREIIDVLRISFDGLH 497

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           ELEKKIFLDIACF KG  +D +   L+ CGFH  IG +VLIEK LI+V  + +WMH+LLQ
Sbjct: 498 ELEKKIFLDIACFLKGFKKDRIIRILDSCGFHAHIGTQVLIEKSLISVSRDQVWMHNLLQ 557

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
            +G++IV+ +SPEE G+RSRLW  E+VC  L ++TG E +E I LD    +   +   + 
Sbjct: 558 IMGKEIVRCESPEEPGRRSRLWTYEDVCLALMDNTGKEKIEAIFLDIPGIKEAQW---NM 614

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           KAFSKM+ LRLLKI N+QL  G E LSN+LR L W  YP K LP+ LQ+D+ +E++M  S
Sbjct: 615 KAFSKMSKLRLLKINNVQLSEGPEDLSNKLRFLEWHSYPSKSLPAGLQVDELVELHMANS 674

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
            I +LW G K   KLK++ LS+S  L + PD TG PNLE LILEGC  L E+HPSL  H 
Sbjct: 675 SIEQLWYGYKSAVKLKIINLSNSLYLSKSPDLTGIPNLESLILEGCISLSEVHPSLGRHK 734

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
           KL  +N+ +C S+  LP  + M+SL+                  TLD  G  K   FP+I
Sbjct: 735 KLQYVNLINCRSIRILPSNLEMESLK----------------FFTLD--GCSKLENFPDI 776

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
           V +M  L +L L+ T I  L  SI  + GL +L++ NC+ LE +  ++  LK L+ L LS
Sbjct: 777 VGNMNCLMKLCLDRTGIAELSPSIRHMIGLEVLSMNNCKKLESISRSIECLKSLKKLDLS 836

Query: 600 GCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK---------- 649
           GCS+LK  P  +  ++ L E  + GTSI+++P+SI LL  L +L+L   +          
Sbjct: 837 GCSELKNIPGNLEKVESLEEFDVSGTSIRQLPASIFLLKNLAVLSLDGLRACNLRALPED 896

Query: 650 ---------------NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
                          N V LP SI  L  L+ L L  C  LE++ E   +++++
Sbjct: 897 IGCLSSLKSLDLSRNNFVSLPRSINQLSGLEKLVLEDCTMLESLLEVPSKVQTV 950



 Score =  209 bits (531), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 159/409 (38%), Positives = 228/409 (55%), Gaps = 30/409 (7%)

Query: 477  LHNKLIILNMKDCTSLITLPGKILMKSLEKLNL--KSLPTTISGLKC---LSTLDVSGDL 531
            L NKL  L      S  +LP  + +  L +L++   S+     G K    L  +++S  L
Sbjct: 640  LSNKLRFLEWHSYPSK-SLPAGLQVDELVELHMANSSIEQLWYGYKSAVKLKIINLSNSL 698

Query: 532  KFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
               + P++   + +L  L LEG  ++  +  S+     L  +NL NCRS+ ILP  +  +
Sbjct: 699  YLSKSPDLT-GIPNLESLILEGCISLSEVHPSLGRHKKLQYVNLINCRSIRILPSNL-EM 756

Query: 591  KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKN 650
            + L+   L GCSKL+ FP+IV +M  L +L LD T I E+  SI  +  LE+L++++CK 
Sbjct: 757  ESLKFFTLDGCSKLENFPDIVGNMNCLMKLCLDRTGIAELSPSIRHMIGLEVLSMNNCKK 816

Query: 651  LVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPI 710
            L  +  SI  LKSLK L+LSGC +L+N+P  L ++ESLEE D+SGT++    +      I
Sbjct: 817  LESISRSIECLKSLKKLDLSGCSELKNIPGNLEKVESLEEFDVSGTSIRQLPA-----SI 871

Query: 711  NLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPT 770
             L++    L L  L   C+LR            ALP DIG L SLK L LS+N+FVSLP 
Sbjct: 872  FLLKNLAVLSLDGLRA-CNLR------------ALPEDIGCLSSLKSLDLSRNNFVSLPR 918

Query: 771  SITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACL 830
            SI  LS L  + LEDC  L+SL ++P  ++ V +NGC SL T+ D +KL  S  +   CL
Sbjct: 919  SINQLSGLEKLVLEDCTMLESLLEVPSKVQTVNLNGCISLKTIPDPIKLSSSQRSEFMCL 978

Query: 831  DSLKLL---GNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQ 876
            D  +L    G  S+   ML  YL+ +SN R    +VVPG+EIP WF +Q
Sbjct: 979  DCWELYEHNGQDSMGSIMLERYLQGLSNPRPGFRIVVPGNEIPGWFNHQ 1027


>gi|105922695|gb|ABF81431.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
 gi|105923067|gb|ABF81454.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 918

 Score =  546 bits (1408), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 316/657 (48%), Positives = 431/657 (65%), Gaps = 23/657 (3%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-I 59
           +DSR + L   +         IGICGMGGLGKTT+ARVVYD I  +FE S FL NV+E  
Sbjct: 123 IDSRLQVLNGYIGEEVGKAIFIGICGMGGLGKTTVARVVYDRIRWQFEGSCFLANVKEDF 182

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           + + G   LQ QLLS++L +   S+W+ + GI+M+  RL+ KK+LL++DDV + +QL+ L
Sbjct: 183 AREDGPRRLQEQLLSEIL-MERASVWDSYRGIEMIKRRLRLKKILLILDDVDEKEQLEFL 241

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           A   +WFG GSRIIITSRD+ +L  +GV  +Y+   LN D+AL LF+ KAFK  QP ++ 
Sbjct: 242 AAESKWFGPGSRIIITSRDKQVLTRNGVARIYEAEKLNDDDALTLFSQKAFKNDQPAEDF 301

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V+LS +++ YA GLPLALEV+GSF+ GRS+ EW S + RL   P  EI+D+L+ISFDGL 
Sbjct: 302 VELSKQVVGYATGLPLALEVIGSFMHGRSILEWGSAINRLNDIPDREIIDVLRISFDGLH 361

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           E +KKIFLDIACF  G   D +T  LE  GF+  IGI VLIE+ LI+V  + +WMH+LLQ
Sbjct: 362 ESDKKIFLDIACFLMGFKIDRITRILESRGFNAGIGISVLIERSLISVSRDQVWMHNLLQ 421

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
            +G++IV+ +SPEE G+RSRLW  ++VC  L ++TG E +E I LD    +   +   + 
Sbjct: 422 IMGKEIVRCESPEEPGRRSRLWTYKDVCLALMDNTGKEKIEAIFLDMPGIKEAQW---NM 478

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           KAFSKM+ LRLLKI N+QL  G E LSN LR L W  YP K LP+  QMD+ +E++M  S
Sbjct: 479 KAFSKMSRLRLLKIHNVQLSEGPEALSNELRFLEWNSYPSKSLPACFQMDELVELHMANS 538

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
            I +LW G K    LK++ LS+S NLI+ PD TG  NLE LILEGCT L E+HPSL  H 
Sbjct: 539 SIEQLWYGYKSAVNLKIINLSNSLNLIKTPDLTGILNLESLILEGCTSLSEVHPSLAHHK 598

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
           KL  +N+  C S+  LP  + M+SL+                + TLD  G  K  +FP+I
Sbjct: 599 KLQYVNLVKCKSIRILPNNLEMESLK----------------VCTLD--GCSKLEKFPDI 640

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
           V +M  L+ L L+ T I  L  SI  L GL LL++ +C++LE +P ++  LK L+ L LS
Sbjct: 641 VGNMNCLTVLCLDETGITKLCSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLS 700

Query: 600 GCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPS 656
           GCS+LK  PE +  ++ L E  + GTSI+++P+SI LL  L++L+   C+ + +LPS
Sbjct: 701 GCSELKYIPENLGKVESLEEFDVSGTSIRQLPASIFLLKNLKVLSSDGCERIAKLPS 757



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 106/286 (37%), Positives = 155/286 (54%), Gaps = 29/286 (10%)

Query: 467 RLYEIHPSLL------LHNKLIILNMKDCTSLITLPGKILMKSLEKLNL--KSLPTTISG 518
           RL +IH   L      L N+L  L      S  +LP    M  L +L++   S+     G
Sbjct: 488 RLLKIHNVQLSEGPEALSNELRFLEWNSYPSK-SLPACFQMDELVELHMANSSIEQLWYG 546

Query: 519 LKC---LSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNL 574
            K    L  +++S  L   + P++   + +L  L LEG T++  +  S+     L  +NL
Sbjct: 547 YKSAVNLKIINLSNSLNLIKTPDLTGIL-NLESLILEGCTSLSEVHPSLAHHKKLQYVNL 605

Query: 575 KNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSI 634
             C+S+ ILP  +  ++ L+   L GCSKL+KFP+IV +M  L+ L LD T I ++ SSI
Sbjct: 606 VKCKSIRILPNNL-EMESLKVCTLDGCSKLEKFPDIVGNMNCLTVLCLDETGITKLCSSI 664

Query: 635 ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
             L  L LL+++ CKNL  +PSSI  LKSLK L+LSGC +L+ +PE LG++ESLEE D+S
Sbjct: 665 HHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPENLGKVESLEEFDVS 724

Query: 695 GTAVPHSTSWYSYIPINLMRKSVAL---------KLPSLSGLCSLR 731
           GT++    +      I L++    L         KLPS SGL + R
Sbjct: 725 GTSIRQLPA-----SIFLLKNLKVLSSDGCERIAKLPSYSGLSNPR 765



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 125/279 (44%), Gaps = 37/279 (13%)

Query: 614 MKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCF 673
           M +L EL +  +SI+++    +    L+++NLS+  NL++ P  +  + +L++L L GC 
Sbjct: 527 MDELVELHMANSSIEQLWYGYKSAVNLKIINLSNSLNLIKTPD-LTGILNLESLILEGCT 585

Query: 674 KLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKL 733
            L  V  +L   + L+                    +NL++      LP+   + SL+  
Sbjct: 586 SLSEVHPSLAHHKKLQY-------------------VNLVKCKSIRILPNNLEMESLKVC 626

Query: 734 NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
            L  C+ +E   P  +GN+  L  L L +     L +SI HL  L  + +  CK L+S+P
Sbjct: 627 TLDGCSKLE-KFPDIVGNMNCLTVLCLDETGITKLCSSIHHLIGLGLLSMNSCKNLESIP 685

Query: 794 Q---LPPNIRQVRVNGCASLVTLLDALKLCKSDSTM-------------IACLDSLKLLG 837
                  +++++ ++GC+ L  + + L   +S                 I  L +LK+L 
Sbjct: 686 SSIGCLKSLKKLDLSGCSELKYIPENLGKVESLEEFDVSGTSIRQLPASIFLLKNLKVLS 745

Query: 838 NKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQ 876
           +              +SN R    + +PG+EIP WF +Q
Sbjct: 746 SDGCERIAKLPSYSGLSNPRPGFGIAIPGNEIPGWFNHQ 784


>gi|224104273|ref|XP_002333965.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222839252|gb|EEE77603.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1033

 Score =  546 bits (1408), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 379/986 (38%), Positives = 539/986 (54%), Gaps = 152/986 (15%)

Query: 27  MGGLGKTTIARVVYDLISHEFEASGFLDNVREI-SSKGGLVSLQRQLLSQLLKLADNSIW 85
           MGG+GKTT+ARV+YD I  +FE S FL NVRE+ + KGG   LQ QLLS++L +   S+ 
Sbjct: 1   MGGIGKTTVARVLYDKIRWQFEGSYFLANVREVFAEKGGPRRLQEQLLSEIL-MECASLK 59

Query: 86  NVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTH 145
           + + GI+M+  RL+ KK+LL++DDV D KQL+ LA    WFG GSRIIITSRD ++   +
Sbjct: 60  DSYRGIEMIKRRLRLKKILLILDDVDDKKQLEFLAAEPGWFGPGSRIIITSRDTNVFTGN 119

Query: 146 GVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLS 205
              ++Y+   LN D+AL LFN KAFK  QP ++ V+LS ++ +Y          LGS   
Sbjct: 120 DDTKIYEAEKLNDDDALMLFNQKAFKNDQPTEDFVKLSKQV-KYP--------CLGS--- 167

Query: 206 GRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFL 265
                     + RL   P  EI+D+L+ISFDGL ELEKKIFLDIACF KG ++D +   L
Sbjct: 168 ---------AINRLNEIPDREIIDVLRISFDGLHELEKKIFLDIACFLKGFEKDRIIRIL 218

Query: 266 EGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEE 325
           + CGFH  IG +VLIE+ LI+V+ + +WMHDLLQ +G++IV+ +S EE G+RSRLW  E+
Sbjct: 219 DSCGFHAHIGTQVLIERSLISVYRDQVWMHDLLQIMGKEIVRSESSEEPGRRSRLWTFED 278

Query: 326 VCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYL 385
           V   L ++TG E +E I LD    +   +   + +AFSKM+ LRLLKI N+QL  G E L
Sbjct: 279 VRLALMDNTGKEKIEAIFLDMPEIKEAQW---NMEAFSKMSRLRLLKIDNVQLSEGPEDL 335

Query: 386 SNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENL 445
           SN+LR L W  YP K LP+ LQ+D+ +E++M  S I +LW G K    LK++ LS+S NL
Sbjct: 336 SNKLRFLEWHSYPSKSLPAGLQVDELVELHMANSSIEQLWYGCKSAVNLKIINLSNSLNL 395

Query: 446 IRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLE 505
            + PD TG PNLE LILEGCT L ++HPSL  H KL  +N+ +C S+  LP  + M+SL+
Sbjct: 396 SKTPDLTGIPNLESLILEGCTSLSKVHPSLAHHKKLQYMNLVNCKSIRILPNNLEMESLK 455

Query: 506 KLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIEL 565
                           + TLD  G  K  +FP+IV +M  L EL L+GT +  L  SI  
Sbjct: 456 ----------------VFTLD--GCSKLEKFPDIVGNMNCLMELRLDGTGVEELSSSIHH 497

Query: 566 LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT 625
           L  L +L++ NC++LE +P ++  LK L+ L LSGCS+LK   ++  S     E    GT
Sbjct: 498 LISLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKNLEKVESS----EEFDASGT 553

Query: 626 SIKEVPSSIELLTKLELLNLSDCKNLV------RLPSSIIALKSLKTLNLSGCFKLENVP 679
           SI++ P+ I LL  L++L+   CK +       RLP S+  L SL+ L+L  C       
Sbjct: 554 SIRQPPAPIFLLKNLKVLSFDGCKRIAVSLTDQRLP-SLSGLCSLEVLDLCAC------- 605

Query: 680 ETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP-SLSGLCSLRKLNLTDC 738
                       ++   A+P      S +    + ++  + LP S++ L  L  L L DC
Sbjct: 606 ------------NLREGALPEDIGCLSSLKSLDLSRNNFVSLPRSVNQLSGLEMLVLEDC 653

Query: 739 NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPN 798
            ++E                        SLP                        ++P  
Sbjct: 654 RMLE------------------------SLP------------------------EVPSK 665

Query: 799 IRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLL---GNKSLAFSMLREYLEAVSN 855
           ++ V +NGC SL  + D +KL  S  +   CL+  +L    G  S+  +ML  YL+ +SN
Sbjct: 666 VQTVNLNGCTSLKEIPDPIKLSSSKISEFLCLNCWELYEHNGQDSMGLTMLERYLQGLSN 725

Query: 856 TRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNN 915
            R    + VPG+EIP WF +Q++GSSI+V  PS        +G+  C  F         +
Sbjct: 726 PRPGFGIAVPGNEIPGWFNHQSKGSSISVQVPS------WSMGFVACVAF---------S 770

Query: 916 CFGSYPTHQLNCHI---GHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLE 972
            +G  P   L C     G   Y         Q  SDH+WL YLS     +++   E   E
Sbjct: 771 AYGERPF--LRCDFKANGRENYPSLMCINSIQVLSDHIWLFYLSFDYLKELK---EWQNE 825

Query: 973 PFESNHVNVSFEPWLGQGLEVKMCGL 998
            F  +++ +SF  +  + ++VK CG+
Sbjct: 826 SF--SNIELSFHSY-ERRVKVKNCGV 848


>gi|224145021|ref|XP_002325498.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862373|gb|EEE99879.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1561

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 386/1026 (37%), Positives = 551/1026 (53%), Gaps = 111/1026 (10%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +DSR EK+  L+   +SDVR+IGI GMGG+GKTTIA   +  IS ++E   FL N+R+ S
Sbjct: 191  VDSRIEKINKLLSIVASDVRIIGIWGMGGIGKTTIAEAFFYSISSQYEGCHFLPNIRQES 250

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
             KG L  L+  LLS+LL+  +  +     G   +  RL +KKVLLV+DDV D +Q Q L 
Sbjct: 251  EKGPLSDLRDDLLSKLLEEENLRVGTPHIGPTFIRDRLCQKKVLLVLDDVNDARQFQQLI 310

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
                  G+GS +++TSRD+ +LK +  DE+Y+   LN  EAL+LF++ AFK   P +  +
Sbjct: 311  -EVPLIGAGSVVVVTSRDKQVLK-NVADEIYEVEELNSHEALELFSLIAFKGNHPPKSYM 368

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            +LS   I YA G PLAL VLGSFL  R    W S L  +E  P   I D+L+I FD L++
Sbjct: 369  ELSITAINYAKGNPLALRVLGSFLIRRERHFWESQLNNIESFPELNICDLLRIGFDALRD 428

Query: 241  LE-KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
               K IFLDIACFF+G+  D+V   L+GCGF   IG  VLI++CLI   ++ + MHDLLQ
Sbjct: 429  NNTKSIFLDIACFFRGHQVDFVKRILDGCGFKTDIGFSVLIDRCLIKFSDDKVQMHDLLQ 488

Query: 300  ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
            E+  ++V+++S  ELG +SR W  ++V  VLT + GT  VEGI LD      E+ L  S+
Sbjct: 489  EMAHEVVRKESLNELGGQSRSWSPKDVYQVLTNNQGTGKVEGIFLD-VSKIREIEL--SS 545

Query: 360  KAFSKMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
             A  +M  LRLLKI        C + LP+GLE LS  LR L W GYPL  LPSN +    
Sbjct: 546  TALERMYKLRLLKIYNSEAGVKCRVHLPHGLESLSEELRYLHWDGYPLTSLPSNFRPQNL 605

Query: 412  IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
            +EI +  S++  LW+G ++L  LK + LS+ E++  MPD + A NLE+L L+ CT L + 
Sbjct: 606  VEINLSCSKVNRLWRGHQNLVNLKDVNLSNCEHITFMPDLSKARNLERLNLQFCTSLVKF 665

Query: 472  HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN----------------------- 508
              S+   +KL+ L+++ C  LI LP +I    LE LN                       
Sbjct: 666  PSSVQHLDKLVDLDLRGCKRLINLPSRINSSCLETLNVSGCANLKKCPETARKLTYLNLN 725

Query: 509  ---------------------------LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVE 541
                                       L +LP  +  LK L   D+SG       P+   
Sbjct: 726  ETAVEELPQSIGELNGLVALNLKNCKLLVNLPENMYLLKSLLIADISGCSSISRLPDFSR 785

Query: 542  HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
            ++ +L   +L GTAI  LP SI  L  L+ L+L  C  L+ LP  VS L CL  L LSGC
Sbjct: 786  NIRYL---YLNGTAIEELPSSIGDLRELIYLDLGGCNRLKNLPSAVSKLVCLEKLDLSGC 842

Query: 602  SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
            S + +FP++  ++K   EL+L+GT+I+E+PSSIE L +L  L+L +CK    LPSSI  L
Sbjct: 843  SNITEFPKVSNTIK---ELYLNGTAIREIPSSIECLFELAELHLRNCKQFEILPSSICKL 899

Query: 662  KSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRK------ 715
            + L+ LNLSGC +  + PE L  +  L  L +  T +    S     PI  ++       
Sbjct: 900  RKLQRLNLSGCVQFRDFPEVLEPMVCLRYLYLEQTRITKLPS-----PIGNLKGLACLEV 954

Query: 716  -----------SVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNS 764
                        V L+LP    L  LRKLNL  C + E  +P  +G + SL+ L LS N+
Sbjct: 955  GNCQHLRDIECIVDLQLPERCKLDCLRKLNLDGCQIWE--VPDSLGLVSSLEVLDLSGNN 1012

Query: 765  FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDS 824
            F S+P SI  L +L  + L +C+ L+SLP+LPP + ++  + C SL T+  +    + + 
Sbjct: 1013 FRSIPISINKLFELQYLGLRNCRNLESLPELPPRLSKLDADNCWSLRTVSCSSTAVEGNI 1072

Query: 825  TMIACLDSLKLLG-NKSLAFSML-------REYLEAVSNTRQHLSVVVPGSEIPEWFMYQ 876
                  +  +L   N+ L +S+L       R Y +      +  S  +PG   PEWF +Q
Sbjct: 1073 FEFIFTNCKRLRRINQILEYSLLKFQLYTKRLYHQLPDVPEEACSFCLPGDMTPEWFSHQ 1132

Query: 877  NEGSSITVTRPSNLYNKKKLVGYAICCV--FHVLKNSRGNNCFGSY-----PTHQLNCHI 929
            + GS +T    S+ +   K +G+++C V  FH   +S    C   +      +H L C++
Sbjct: 1133 SWGSIVTFQLSSH-WAHTKFLGFSLCAVIAFHSFSHSLQVKCTYHFHNEHGDSHDLYCYL 1191

Query: 930  GHGIYG 935
             H  YG
Sbjct: 1192 -HVCYG 1196



 Score = 45.1 bits (105), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 49/133 (36%), Gaps = 29/133 (21%)

Query: 855  NTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGN 914
            ++R+  S  +PG   PEWF +Q  GS++T    S   N K  +G+ +C V          
Sbjct: 1349 SSRECSSFYLPGDVTPEWFSHQRWGSTVTFHLSSQWANSKSFLGFCLCAVIAF------- 1401

Query: 915  NCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPF 974
                        C  GH +          + G  H    YL  +  YD         E  
Sbjct: 1402 ------------CSFGHSLQVKCTYHFCNEHGDSHDLYFYL--RDWYDK--------ECI 1439

Query: 975  ESNHVNVSFEPWL 987
             S H+ V F+P L
Sbjct: 1440 NSTHIFVGFDPCL 1452


>gi|357507537|ref|XP_003624057.1| TMV resistance protein N [Medicago truncatula]
 gi|355499072|gb|AES80275.1| TMV resistance protein N [Medicago truncatula]
          Length = 1122

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 335/771 (43%), Positives = 489/771 (63%), Gaps = 53/771 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++S+ E++  L+  G +DVR IGI GMGG+GK+TIAR VY+ I  EF+ + FL+NVREIS
Sbjct: 204 IESKVEEVNKLIGMGLNDVRFIGIWGMGGIGKSTIARAVYEAIRCEFQLTCFLENVREIS 263

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
              GLV LQRQLLS +  ++ N   N++DG   + +  +RKKVLLV+DDV ++ QL+++A
Sbjct: 264 ETNGLVHLQRQLLSHM-SISRNDFHNLYDGKKTIQNSFRRKKVLLVLDDVNELNQLENMA 322

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G ++WFG GSR+IIT+RD+HLL THGV + Y+   L  +EAL LF +KAFK  +P +  +
Sbjct: 323 GKQDWFGPGSRVIITTRDKHLLMTHGVHKTYEVWMLFQNEALNLFCLKAFKGDKPQEGYL 382

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            LS  ++ Y GGLPLALEV GS+L GR+VD W S ++++   P  +I D L+IS++ L  
Sbjct: 383 DLSKEVVDYTGGLPLALEVFGSYLYGRNVDLWHSAIKKIRSVPLRKIQDKLEISYESLDP 442

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH--NNTLWMHDLL 298
           +EK +FLDIACFFKG   D V + LE CG+ P I I+VLI++ LIT+   NN L MHDLL
Sbjct: 443 MEKDVFLDIACFFKGMKIDKVIDILENCGYFPKIIIQVLIDRSLITLDRVNNKLGMHDLL 502

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           QE+G+ IV ++SP + G+ SRLW +E++  VLT++ GTE +  +VL+        +   S
Sbjct: 503 QEMGRNIVFQESPNDPGRCSRLWSKEDIDSVLTKNKGTEKISSVVLNLLQPYEARW---S 559

Query: 359 AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
            +AFSK + L+LL +  +QLP GL  L   L++L WRG PLK L    Q+D+ ++I + +
Sbjct: 560 TEAFSKTSQLKLLNLNEVQLPLGLSCLPCSLKVLRWRGCPLKTLAQTNQLDEVVDIKLSH 619

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           S+I +LW G+  ++KLK + L  S+NL R+PDF+G PNLEKLIL+GC+ L E+H SL+ H
Sbjct: 620 SKIEKLWHGVYFMEKLKYLNLKFSKNLKRLPDFSGVPNLEKLILKGCSILTEVHLSLVHH 679

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
            K++++++K+C SL +LPGK+ M SL+KL L                  SG  +F+  PE
Sbjct: 680 KKVVVVSLKNCKSLKSLPGKLEMSSLKKLIL------------------SGCSEFKFLPE 721

Query: 539 IVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKL 598
             E ME+LS L L+GT IR LPLS+  L GL  LNLK+C+SL  LP T+  L  L  L +
Sbjct: 722 FGEKMENLSILALKGTDIRKLPLSLGSLVGLTNLNLKDCKSLVCLPDTIHGLNSLIILNI 781

Query: 599 SGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL------- 651
           SGCS+L + P+ ++ ++ L EL  + T+I E+PS I  L  L++L+ + C+         
Sbjct: 782 SGCSRLCRLPDGLKEIQCLKELHANDTAIDELPSFIFYLDNLKVLSFAGCQGPPAMSTNW 841

Query: 652 ---------------VRLPSSIIALKSLKTLNLSGC-FKLENVPETLGQIESLEELDISG 695
                           RLP+S ++L SLK LNLS C    E++P     + SL+ LD++G
Sbjct: 842 FPFNWMFGGQSASTGFRLPTSFLSLHSLKYLNLSYCNLSEESIPNYFHHLSSLKSLDLTG 901

Query: 696 ---TAVPHSTSWYSYIPINLMRKSVALK-LPSLSGLCSLRKLNLTDCNLME 742
                +P S S  S +    +     L+ LP L     + +L+ ++C+ +E
Sbjct: 902 NNFVIIPSSISKLSRLRFLCLNWCEQLQLLPELPS--RIMQLDASNCDSLE 950


>gi|297807789|ref|XP_002871778.1| hypothetical protein ARALYDRAFT_488633 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297317615|gb|EFH48037.1| hypothetical protein ARALYDRAFT_488633 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1281

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 379/1095 (34%), Positives = 567/1095 (51%), Gaps = 143/1095 (13%)

Query: 8    LRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVS 67
            L+ +M     DVRM+GI GMGG+GKTTIA+ +Y+ +S  F+A  F++NV+E+ ++ G+  
Sbjct: 197  LQSMMSIEDKDVRMVGIWGMGGVGKTTIAKYLYNQLSGRFQAHCFMENVKEVCNRYGVRR 256

Query: 68   LQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFG 127
            LQ + L ++ +      W       M+  R + K+VL+V+DDV   +QL  L    +WFG
Sbjct: 257  LQEEFLCRMFRERHKEAWGSVSCCSMIRERFRHKRVLIVLDDVDRSEQLNELVKEIDWFG 316

Query: 128  SGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQ-LSARI 186
             GSRII+T+RD HLL +HG+D VYK   L   EALQLF   AF+    +    Q LS + 
Sbjct: 317  PGSRIIVTTRDRHLLLSHGIDLVYKVKCLPKREALQLFCNYAFREEIRIPHGFQELSVQA 376

Query: 187  IRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIF 246
            I YA GLPLAL VLGSFL  RS  EW STL RL+  P S+I+++L++S+DGL E EK IF
Sbjct: 377  INYASGLPLALRVLGSFLYRRSQREWESTLARLKTYPHSDIMEVLRVSYDGLDEQEKAIF 436

Query: 247  LDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIV 306
            L I+CF+     DYVT  L+ CGF   IGI +L EK LI V N  + MHDLL+++G++IV
Sbjct: 437  LYISCFYNMKHVDYVTKLLDICGFAAEIGITILTEKSLIFVSNGNIKMHDLLEQMGREIV 496

Query: 307  QRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMT 366
            ++Q+     +R  +W  E++C +L+E++GT+LVEGI L N    +EV+  AS +AF  ++
Sbjct: 497  RQQAVNNPAQRLLVWDPEDICDLLSENSGTQLVEGISL-NLSEISEVF--ASDRAFEGLS 553

Query: 367  NLRLLKICNL--------QLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
            NL+LL   +L         LPNGL YL  +LR L W GYPLK +PS    +  +E+ M  
Sbjct: 554  NLKLLNFYDLSFDGETRVHLPNGLSYLPRKLRYLRWDGYPLKTMPSRFCPEFLVELCMSN 613

Query: 419  SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
            S + +LW GI+ L  LK M LS  + L+ +PD + A NLE+L L  C  L E+ PS+   
Sbjct: 614  SDLEKLWDGIQPLTNLKKMDLSRCKYLVEIPDLSKATNLEELNLSYCQSLVEVTPSIKNL 673

Query: 479  NKLIILNMKDCTSLITLPGKILMKSLEKLNL--------------------------KSL 512
              L    M +C  L  +P  I +KSLE + +                          + L
Sbjct: 674  KGLSCFYMTNCIQLKNIPIGITLKSLETVRMSGCSSLMHFPEISWNTRRLYLSSTKIEEL 733

Query: 513  PTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLL 572
            P++IS L CL  LD+S   + R  P  + H+  L  L+L+G                   
Sbjct: 734  PSSISRLSCLVELDMSDCQRLRTLPSYLRHLVSLKSLNLDG------------------- 774

Query: 573  NLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPS 632
                C+ LE LP T+ NL  L +L++SGC  + +FP +  +++ L    +  TSI+E+P+
Sbjct: 775  ----CKRLENLPGTLQNLTSLETLEVSGCLNVNEFPRVATNIEVLR---ISETSIEEIPA 827

Query: 633  SIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLEN--------------- 677
             I  L++L  L++S+ K L  LP SI  L+SL+ L LSGC  LE+               
Sbjct: 828  RICNLSQLRSLDISENKRLKSLPLSISKLRSLEKLKLSGCSVLESFPPEICQTMSCLRWF 887

Query: 678  ---------VPETLGQIESLEELDISGTAV---PHSTSWYSYIPINLMRKSVALKLPSLS 725
                     +PE +G + +LE L  S T +   P S +  + + +  +  S+      L 
Sbjct: 888  DLDRTSIKELPENIGNLVALEVLQASRTVIRRAPRSIARLTRLQVLAIGNSLYTPEGLLH 947

Query: 726  GLC-------SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
             LC        LR L+L++ N++E  +P+ IGNL +L E+ LS NSF  +P SI  L++L
Sbjct: 948  SLCPPLARFDDLRALSLSNMNMVE--IPNSIGNLWNLLEIDLSGNSFEFIPASIKRLTRL 1005

Query: 779  LNIELEDCKRLQSLP-QLPPNIRQVRVNGCASLVTLLDAL-KLCKSDSTMIACLDSLKLL 836
              + L +C+RLQ+LP +LP  +  + ++ C SLV++     + C        C      L
Sbjct: 1006 NRLNLNNCQRLQALPDELPRGLLYIYIHNCTSLVSISGCFNQYCLRQFVASNCYK----L 1061

Query: 837  GNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKL 896
               +         LE+      +     PGS+IP  F +Q  G S+ +  P +  +   +
Sbjct: 1062 DQAAQILIHCNMKLESAKPEHSYF----PGSDIPSCFNHQVMGPSLNIQLPQS-ESSSDI 1116

Query: 897  VGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYG-----------IGFRDKFGQA 945
            +G++ C +  V          G YP + L  H    +             + + D     
Sbjct: 1117 LGFSACIMIGV---------DGQYPMNNLKIHCSCILKDADDCELVVMDEVWYPDPKAFT 1167

Query: 946  ----GSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPV 1001
                G+DHL L     +TC  +    E+  E    N    SF P LG   EVK C +H +
Sbjct: 1168 NMCFGTDHLLLF---SRTCMSMGAYNEALFEFSIENTEGDSFSP-LG---EVKKCAVHLI 1220

Query: 1002 -YMDEVEELDQTTNQ 1015
             + D ++E    +++
Sbjct: 1221 SFKDMMQEFSNDSDK 1235


>gi|224120756|ref|XP_002330944.1| hypothetical protein POPTRDRAFT_838042 [Populus trichocarpa]
 gi|222873138|gb|EEF10269.1| hypothetical protein POPTRDRAFT_838042 [Populus trichocarpa]
          Length = 813

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 342/834 (41%), Positives = 480/834 (57%), Gaps = 101/834 (12%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVREI-SSKGGLVSLQRQLLSQLLKLADNSIWNVFDG 90
           KTT++RV+YD I  +FE S FL NVRE+ + K G   LQ QLLS++L +   S+W+   G
Sbjct: 70  KTTVSRVLYDRIRWQFEGSCFLANVREVFAEKDGPRRLQEQLLSEIL-MERASVWDSSRG 128

Query: 91  IDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEV 150
           I+M+  RL+ KK+LL++DDV D KQL+ LA    WFG  SRIIITSRD+++   +   ++
Sbjct: 129 IEMIKRRLRLKKILLILDDVDDKKQLEFLAAEPGWFGPRSRIIITSRDKNVFTGNDDTKI 188

Query: 151 YKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVD 210
           Y+   LN D+AL LF+ KAFK  QP ++ V+LS +++ YA GLPLALEV+GSFL GRS+ 
Sbjct: 189 YEAEKLNDDDALMLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFLYGRSIP 248

Query: 211 EWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGF 270
           EWR  + R+   P  +I+D+L+ISFDGL E ++KIFLDIACF KG  +D +T  L+ CGF
Sbjct: 249 EWRGAINRMHEIPDCKIMDVLRISFDGLHESDQKIFLDIACFLKGFKKDRITRILDSCGF 308

Query: 271 HPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVL 330
           +  IGI VLIE+ LI+V+ + +WMH+LLQ +G++IV+ + P+E GKRSRLW  E+V   L
Sbjct: 309 NAGIGIPVLIERSLISVYGDQVWMHNLLQIMGKEIVRCEDPKEPGKRSRLWTYEDVSLAL 368

Query: 331 TESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLR 390
            ++TG E +E I LD    +   +   + KAFSKM+ LRLLKI N+QL  G E LS  LR
Sbjct: 369 MDNTGKEKIEAIFLDMPGIKEAQW---NMKAFSKMSRLRLLKIDNVQLSEGPEDLSKELR 425

Query: 391 LLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD 450
            L W  YP K LP+ LQ+D  +E++M  S I +LW G K    LKV+ LS+S NL + PD
Sbjct: 426 FLEWHSYPSKSLPAGLQVDGLVELHMANSSIEQLWYGCKSAVNLKVINLSNSLNLSKTPD 485

Query: 451 FTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK 510
            TG PNL  LILEGCT L E+HPSL  H  L  +N+ +C S   LP  + M+SL+     
Sbjct: 486 LTGIPNLSSLILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSFRILPSNLEMESLK----- 540

Query: 511 SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLV 570
                      + TLD  G  K  +FP+IV +M  L EL L+GT I  L  SI  L GL 
Sbjct: 541 -----------VFTLD--GCTKLEKFPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLE 587

Query: 571 LLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEV 630
           +L++ NC++LE +P ++  LK L+ L LSGCS+LK  PE +  ++ L E  + GTSI++ 
Sbjct: 588 VLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKNIPENLGKVESLEEFDVSGTSIRQP 647

Query: 631 PSSIELLTKLELLNLSDCKNLV------RLPSSIIALKSLKTLNLSGCFKLENVPETLGQ 684
           P+SI LL  L++L+   CK +       RLP S+  L SL+ L+L  C            
Sbjct: 648 PASIFLLKSLKVLSFDGCKRIAVNPTDQRLP-SLSGLCSLEVLDLCAC------------ 694

Query: 685 IESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEG 743
                  ++   A+P      S +    + ++  + LP S++ L  L  L L DC ++E 
Sbjct: 695 -------NLREGALPEDIGCLSSLKSLDLSRNNFVSLPRSINKLFGLETLVLEDCRMLE- 746

Query: 744 ALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR 803
                                                          SLP++P  ++ + 
Sbjct: 747 -----------------------------------------------SLPEVPSKVQTLN 759

Query: 804 VNGCASLVTLLDALKLCKSDSTMIACLDSLKLL---GNKSLAFSMLREYLEAVS 854
           +NGC  L  + D +KL  S  +   C+D  +L    G  SL  +ML  YL+  S
Sbjct: 760 LNGCIRLKEIPDPIKLSSSKRSEFICIDCRELYEHKGQDSLGLTMLERYLQVFS 813


>gi|296089535|emb|CBI39354.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  537 bits (1384), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 312/669 (46%), Positives = 412/669 (61%), Gaps = 56/669 (8%)

Query: 15  GSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLS 74
           GS DVRM+GI GM G+GKTTIA+V+Y+ I  +FE   FL NVRE S K GL  LQ +LLS
Sbjct: 33  GSLDVRMVGIWGMAGIGKTTIAKVIYERIYTQFEGCCFLSNVREESYKHGLPYLQMELLS 92

Query: 75  QLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIII 134
           Q+LK    +      GI+ +   L  +KVL+++DDV   +QL+ LAG   WFG GSRIII
Sbjct: 93  QILKERKPNAGLFNKGINFMKDVLHSRKVLIILDDVDQRQQLEDLAGYNNWFGLGSRIII 152

Query: 135 TSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLP 194
           T+RD HLL    VD +Y+   L+ DEAL+LF + AF+     ++  QL    + Y  GLP
Sbjct: 153 TTRDRHLLTCQEVDAIYEVKELDNDEALKLFCLYAFRHRHGTEDFRQLCGHALDYTSGLP 212

Query: 195 LALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFK 254
           LAL+VLGS L  + + EW S L +L+  P  E+ ++L+ SF+GL + E+ IFLDIA F+K
Sbjct: 213 LALKVLGSSLYTKGIHEWESELNKLKQFPNKEVQNVLKTSFEGLDDNEQNIFLDIAFFYK 272

Query: 255 GNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEEL 314
           G+D+D+V + L+ CGF   IGIR L +K LIT+  N L MHDLLQE+G +IV RQ  E  
Sbjct: 273 GHDKDFVGDILDSCGFFFGIGIRNLEDKSLITISENKLCMHDLLQEMGWEIV-RQKSEVP 331

Query: 315 GKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKIC 374
           G+RSRL   E++ HVLT +TGTE VEGI LD    +    L  S  AF+KM  LRLLKIC
Sbjct: 332 GERSRLRVHEDINHVLTTNTGTEAVEGIFLDLSESKE---LNFSIDAFTKMKRLRLLKIC 388

Query: 375 NLQLPNGLEY----------------------------------LSNRLRLLGWRGYPLK 400
           N+Q+   L Y                                  LSN LR L W GYPLK
Sbjct: 389 NVQIDRSLGYLSKKELIAYTHDVWTERNYLYTQNKLHLYEDSKFLSNNLRDLYWHGYPLK 448

Query: 401 FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
             PSN   +K +E+ MC+SR+ +LW+G K  +KLK + LSHS++L + PDF+G PNL +L
Sbjct: 449 SFPSNFHPEKLVELNMCFSRLKQLWEGKKGFEKLKSIKLSHSQHLTKTPDFSGVPNLRRL 508

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLK 520
           IL+GCT L E+HPS+    KLI LN++ C  L +    I M+SL+ L L           
Sbjct: 509 ILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIHMESLQILTL----------- 557

Query: 521 CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL 580
                  SG  K ++FPEI E+ME L EL L+G+ I  LP SI  L+GLV LNLKNC+ L
Sbjct: 558 -------SGCSKLKKFPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKL 610

Query: 581 EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
             LP +   L  L +L L GCS+LK+ P+ + S++ L+EL  DG+ I+EVP SI LLT L
Sbjct: 611 ASLPQSFCELTSLGTLTLCGCSELKELPDDLGSLQCLAELNADGSGIQEVPPSITLLTNL 670

Query: 641 ELLNLSDCK 649
           + L+L+ CK
Sbjct: 671 QKLSLAGCK 679



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 88/249 (35%), Positives = 123/249 (49%), Gaps = 11/249 (4%)

Query: 545 HLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKL 604
           +L +L+  G  ++  P +      LV LN+   R L+ L       + L+S+KLS    L
Sbjct: 436 NLRDLYWHGYPLKSFPSNFHP-EKLVELNMCFSR-LKQLWEGKKGFEKLKSIKLSHSQHL 493

Query: 605 KKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
            K P+    + +L  L L G TS+ EV  SI  L KL  LNL  CK L    SSI  ++S
Sbjct: 494 TKTPDF-SGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSI-HMES 551

Query: 664 LKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYS-YIPINLMRKSVAL 719
           L+ L LSGC KL+  PE    +ESL EL + G+ +   P S    +  + +NL       
Sbjct: 552 LQILTLSGCSKLKKFPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLA 611

Query: 720 KLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
            LP S   L SL  L L  C+ ++  LP D+G+L  L EL    +    +P SIT L+ L
Sbjct: 612 SLPQSFCELTSLGTLTLCGCSELK-ELPDDLGSLQCLAELNADGSGIQEVPPSITLLTNL 670

Query: 779 LNIELEDCK 787
             + L  CK
Sbjct: 671 QKLSLAGCK 679



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 25/217 (11%)

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
           LK FP      K L EL +  + +K++    +   KL+ + LS  ++L + P     + +
Sbjct: 447 LKSFPSNFHPEK-LVELNMCFSRLKQLWEGKKGFEKLKSIKLSHSQHLTKTPD-FSGVPN 504

Query: 664 LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPS 723
           L+ L L GC  L  V  ++G ++ L  L++ G     S S   ++         +L++ +
Sbjct: 505 LRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIHME--------SLQILT 556

Query: 724 LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIEL 783
           LSG   L+K             P    N+ SL EL+L  +  + LP+SI  L+ L+ + L
Sbjct: 557 LSGCSKLKKF------------PEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNL 604

Query: 784 EDCKRLQSLPQL---PPNIRQVRVNGCASLVTLLDAL 817
           ++CK+L SLPQ      ++  + + GC+ L  L D L
Sbjct: 605 KNCKKLASLPQSFCELTSLGTLTLCGCSELKELPDDL 641


>gi|224116238|ref|XP_002331995.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832119|gb|EEE70596.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 955

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 331/818 (40%), Positives = 469/818 (57%), Gaps = 100/818 (12%)

Query: 69  QRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGS 128
           + QLLS++L +   S+W+ + GI+M+  R + KK+L ++DDV D KQL+  A    WFG 
Sbjct: 228 REQLLSEIL-MERASVWDSYRGIEMIKRRSRLKKILHILDDVDDKKQLEFFAAEPGWFGP 286

Query: 129 GSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIR 188
           GSRIIITSRD ++L  +   ++Y+   LN D+AL LF+ KAFK  QP ++ V+LS +++ 
Sbjct: 287 GSRIIITSRDTNVLTGNDDTKIYEAEKLNDDDALMLFSQKAFKNDQPDEDFVELSKQVVG 346

Query: 189 YAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLD 248
           YA GLPLA+EV+GSFL  RS+ EWR  + R+   P  +I+D+L+ISFDGL E +KKIFLD
Sbjct: 347 YANGLPLAIEVIGSFLYARSIPEWRGAINRMNEIPDGKIIDVLRISFDGLHESDKKIFLD 406

Query: 249 IACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQR 308
           IACF  G   D +T  LE  GFH  IGI VLIE+ LI+V  + +WMH+LLQ +G++IV+ 
Sbjct: 407 IACFLMGFKIDRITRILESRGFHAGIGIPVLIERSLISVSRDQVWMHNLLQIMGKEIVRC 466

Query: 309 QSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNL 368
           +SPEE G+RSRLW  E+VC  L +STG E +E I LD    +   +   + +AFSKM+ L
Sbjct: 467 ESPEEPGRRSRLWTYEDVCLALMDSTGKEKIEAIFLDMPGIKEAQW---NMEAFSKMSKL 523

Query: 369 RLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGI 428
           RLLKI N+QL  G E LSN+LR L W  YP K LP+ LQ+D+ +E++M  SRI +LW G 
Sbjct: 524 RLLKINNVQLSEGPEDLSNKLRFLEWHSYPSKSLPAGLQVDELVELHMANSRIEQLWYGC 583

Query: 429 KHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKD 488
           K    LK++ LS+S NLI+  DFT  PNLE LILEGCT L E+HPSL  H KL  + + D
Sbjct: 584 KSAVNLKIINLSNSLNLIKTLDFTRIPNLENLILEGCTSLSEVHPSLARHKKLEYVTLMD 643

Query: 489 CTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSE 548
           C S+  LP  + M+SL+                +  LD  G  K  +FP+IV +M  L+ 
Sbjct: 644 CVSIRILPSNLEMESLK----------------VCILD--GCSKLEKFPDIVGNMNKLTV 685

Query: 549 LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
           LHL+ T I  L  SI  L GL +L++ NC++LE +P ++  LK L+ L LSGCS+L+  P
Sbjct: 686 LHLDETGITKLSSSIHHLIGLEVLSMNNCKNLESIPSSIRCLKSLKKLDLSGCSELQNIP 745

Query: 609 EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV------RLPSSIIALK 662
           + +  ++ L E+ + GTSI++ P+SI LL  L++L+L  CK +       RLP S+  L 
Sbjct: 746 QNLGKVEGLEEIDVSGTSIRQPPASIFLLKSLKVLSLDGCKRIAVNPTGDRLP-SLSGLC 804

Query: 663 SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
           SL+ L+L  C                   ++   A+P      S +    + ++  + LP
Sbjct: 805 SLEVLDLCAC-------------------NLREGALPEDIGCLSSLKSLDLSQNNFVSLP 845

Query: 723 -SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNI 781
            S++ L  L  L L DC ++E                                       
Sbjct: 846 ESINQLSGLEMLVLEDCRMLE--------------------------------------- 866

Query: 782 ELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLL---GN 838
                    SLP++P  ++ V +NGC  L  + D +KL  S  +   CL+   L    G 
Sbjct: 867 ---------SLPEVPSKVQTVNLNGCIRLKEIPDPIKLSSSKRSEFICLNCWALYEHNGQ 917

Query: 839 KSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQ 876
            S   +ML  YL+ + N R    + VPG+EIP WF +Q
Sbjct: 918 DSFGLTMLERYLKGLPNPRPGFGIAVPGNEIPGWFNHQ 955


>gi|51477389|gb|AAU04762.1| MRGH21 [Cucumis melo]
          Length = 1020

 Score =  536 bits (1380), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 332/809 (41%), Positives = 478/809 (59%), Gaps = 71/809 (8%)

Query: 4   RCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKG 63
           R  ++  LM  G  DVR IGI GM G+GKTTIAR++Y  +SH F+   FLDNV+E   K 
Sbjct: 222 RLHEINKLMGIGLDDVRFIGIWGMSGIGKTTIARIIYKSVSHLFDGCYFLDNVKEALKKE 281

Query: 64  GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNR 123
           G+ SLQ++LL+  L   +  I N  DG  ++  R+   K L+++DDV +V QL+ LAG+ 
Sbjct: 282 GIASLQQKLLTGALMKRNIDIPNA-DGATLIKRRISNIKALIILDDVDNVSQLRQLAGSL 340

Query: 124 EWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLS 183
           +WFGSGSR+I+T++ E +L +HG++  Y    L  DE +QLF+ KAF    P +    L 
Sbjct: 341 DWFGSGSRVIVTTKHEDILVSHGIERRYNVEVLKIDEGIQLFSQKAFGEDYPKEGYFDLC 400

Query: 184 ARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEK 243
           ++++ YAGGLPLA+EVLGS L  + +++W   +++L      EI + L+IS+  L+  ++
Sbjct: 401 SQVVDYAGGLPLAIEVLGSSLRNKPMEDWIDAVKKLWEVRDKEINEKLKISYYMLENDDR 460

Query: 244 KIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQ 303
           +IFLDIACFFK   +      LE  GF  V+G+ +L EK LIT  +  + MHDL+QE+GQ
Sbjct: 461 EIFLDIACFFKRKSKRRAIEILESFGFPAVLGLDILKEKSLITTPHEKIQMHDLIQEMGQ 520

Query: 304 QIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFS 363
           +IV  + P+E  KRSRLW  E++   L+   GTE +EGI++D    E E +L  +AK+FS
Sbjct: 521 KIVNEEFPDEPEKRSRLWLREDINRALSRDQGTEEIEGIMMD-LDEEGESHL--NAKSFS 577

Query: 364 KMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGE 423
            MTNLR+LK+ N+ L   +EYLS++LR L W GYPLK LPSN      +E+ +  S I  
Sbjct: 578 SMTNLRVLKLNNVHLCEEIEYLSDQLRFLNWHGYPLKTLPSNFNPTNLLELELPNSSIHL 637

Query: 424 LWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLII 483
           LW   K ++ LKV+ LS S+ L + PDF+  PNLE+L+L GC  L+++H SL     LI 
Sbjct: 638 LWTTSKSMETLKVINLSDSQFLSKTPDFSVVPNLERLVLSGCVELHQLHHSLGNLKHLIQ 697

Query: 484 LNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHM 543
           L++++C  L  +P  I ++SL+ L        +SG   L+            FP+I  +M
Sbjct: 698 LDLRNCKKLTNIPFNICLESLKIL-------VLSGCSSLT-----------HFPKISSNM 739

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            +L ELHLE T+I+ L  SI  L+ LV+LNLKNC +L  LP T+ +L  L++L L+GCSK
Sbjct: 740 NYLLELHLEETSIKVLHSSIGHLTSLVVLNLKNCTNLLKLPSTIGSLTSLKTLNLNGCSK 799

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
           L   PE + ++  L +L +  T + + P S +LLTKLE+LN   C+ L R        K 
Sbjct: 800 LDSLPESLGNISSLEKLDITSTCVNQAPMSFQLLTKLEILN---CQGLSR--------KF 848

Query: 664 LKTLNLSGCF--KLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKL 721
           L +L  +  F  K  N  + L                   T+W+++              
Sbjct: 849 LHSLFPTWNFTRKFSNYSQGL-----------------RVTNWFTF-------------- 877

Query: 722 PSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNI 781
                 CSLR LNL+DCNL +G LP+D+ +L SL+ L+LSKN F  LP SI HL  L ++
Sbjct: 878 -----GCSLRILNLSDCNLWDGDLPNDLHSLASLQILHLSKNHFTKLPESICHLVNLRDL 932

Query: 782 ELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
            L +C  L SLP+LP ++R V    C SL
Sbjct: 933 FLVECFHLLSLPKLPLSVRDVEARDCVSL 961


>gi|296089531|emb|CBI39350.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 302/624 (48%), Positives = 404/624 (64%), Gaps = 23/624 (3%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M+SR E +  L+  GS DVRM+GI GM G+GKTTIA+V+Y+ I  +FE   FL NVRE S
Sbjct: 94  MESRLEAMDSLLCIGSLDVRMVGIWGMAGIGKTTIAKVIYERIYTQFEGCCFLSNVREES 153

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            K GL  LQ +LLSQ+LK  + +      GI+ +   L  +KVL+++DDV   KQL+ LA
Sbjct: 154 YKHGLPYLQMELLSQILKERNPNAGLFNKGINFMKDVLHSRKVLIILDDVDQRKQLEDLA 213

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G+  WFGSGSRIIIT+RD HLL    VD +Y+   L+ DEAL+LF + AF+     ++  
Sbjct: 214 GDNNWFGSGSRIIITTRDRHLLTCQEVDAIYEVKELDNDEALKLFCLYAFRHKHGTEDFR 273

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           QL    + Y  GLPLAL+VLGS L  + + EW+S L++L+  P  E+ ++L+ SF+GL +
Sbjct: 274 QLCGHALDYTSGLPLALKVLGSSLYTKGIHEWKSELDKLKQFPNKEVQNVLKTSFEGLDD 333

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            E+ IFLDIA F+KG+D+D+V + L+ CGF   IGIR L +K LIT+  N L MHDLLQE
Sbjct: 334 NEQNIFLDIAFFYKGHDKDFVGDILDSCGFFFGIGIRNLEDKSLITISENKLCMHDLLQE 393

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G +IV RQ  E  G+RSRL   E++ HVLT +TGTE VEGI LD    +    L  S  
Sbjct: 394 MGWEIV-RQKSEVPGERSRLRVHEDINHVLTTNTGTEAVEGIFLDLSASKE---LNFSID 449

Query: 361 AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
           AF+KM  LRLLKICN+Q+   L YLS +  L  W GYPLK  PSN   +K +E+ MC+SR
Sbjct: 450 AFTKMKRLRLLKICNVQIDRSLGYLSKKEDLY-WHGYPLKSFPSNFHPEKLVELNMCFSR 508

Query: 421 IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
           + + W+G K  +KLK + LSHS++L ++PDF+G PNL +LIL+GCT L E+HPS+    K
Sbjct: 509 LKQPWEGKKGFEKLKSIKLSHSQHLTKIPDFSGVPNLRRLILKGCTSLVEVHPSIGALKK 568

Query: 481 LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
           LI LN++ C  L +    I M+SL+ L L                  SG  K ++FPEI 
Sbjct: 569 LIFLNLEGCKKLKSFSSSIHMESLQILTL------------------SGCSKLKKFPEIQ 610

Query: 541 EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
           E+ME L EL L+G+ I  LP SI  L+GLV LNLKNC+ L  LP +   L  LR+L L G
Sbjct: 611 ENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLRTLTLCG 670

Query: 601 CSKLKKFPEIVRSMKDLSELFLDG 624
           CS+LK  P+ + S++ L+EL  DG
Sbjct: 671 CSELKDLPDNLGSLQCLTELNADG 694



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 110/179 (61%), Gaps = 3/179 (1%)

Query: 518 GLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKN 576
           G + L ++ +S      + P+    + +L  L L+G T++  +  SI  L  L+ LNL+ 
Sbjct: 518 GFEKLKSIKLSHSQHLTKIPDF-SGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEG 576

Query: 577 CRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIEL 636
           C+ L+    ++ +++ L+ L LSGCSKLKKFPEI  +M+ L ELFLDG+ I E+PSSI  
Sbjct: 577 CKKLKSFSSSI-HMESLQILTLSGCSKLKKFPEIQENMESLMELFLDGSGIIELPSSIGC 635

Query: 637 LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
           L  L  LNL +CK L  LP S   L SL+TL L GC +L+++P+ LG ++ L EL+  G
Sbjct: 636 LNGLVFLNLKNCKKLASLPQSFCELTSLRTLTLCGCSELKDLPDNLGSLQCLTELNADG 694



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 25/217 (11%)

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
           LK FP      K L EL +  + +K+     +   KL+ + LS  ++L ++P     + +
Sbjct: 487 LKSFPSNFHPEK-LVELNMCFSRLKQPWEGKKGFEKLKSIKLSHSQHLTKIPD-FSGVPN 544

Query: 664 LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPS 723
           L+ L L GC  L  V  ++G ++ L  L++ G     S S   ++         +L++ +
Sbjct: 545 LRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIHME--------SLQILT 596

Query: 724 LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIEL 783
           LSG   L+K             P    N+ SL EL+L  +  + LP+SI  L+ L+ + L
Sbjct: 597 LSGCSKLKKF------------PEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNL 644

Query: 784 EDCKRLQSLPQL---PPNIRQVRVNGCASLVTLLDAL 817
           ++CK+L SLPQ      ++R + + GC+ L  L D L
Sbjct: 645 KNCKKLASLPQSFCELTSLRTLTLCGCSELKDLPDNL 681


>gi|224145030|ref|XP_002325501.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862376|gb|EEE99882.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1435

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 408/1134 (35%), Positives = 594/1134 (52%), Gaps = 140/1134 (12%)

Query: 2    DSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS 61
            DSR E++  L+    SDVR IGI GMGG+GKTTIA   YD  S ++E   FL N+R+ S 
Sbjct: 192  DSRIEQINKLLSIVPSDVRTIGIWGMGGIGKTTIAGAFYDSFSSQYEGHHFLPNIRQESE 251

Query: 62   KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAG 121
            KG L  L+ +LLS+LL+  +  +         +  RL +KKVLLV+DDV DV+Q Q L  
Sbjct: 252  KGRLNDLRDELLSKLLEEENLRVGTPHIPT-FIRDRLCQKKVLLVLDDVNDVRQFQHL-N 309

Query: 122  NREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQ 181
                 G+GS +++TSRD+ +LK + VDE+Y+   LN  EALQLF++ AFK   P +  ++
Sbjct: 310  EVPLIGAGSVVVVTSRDKQVLK-NVVDEIYEVGELNSHEALQLFSLNAFKGNHPPKAYME 368

Query: 182  LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQEL 241
            LS   I YA G PLAL VLGSFL  R    W S L  +E  P   I D+L+I FD L++ 
Sbjct: 369  LSITAINYAKGNPLALRVLGSFLFNRERHFWESQLNEIESFPELNICDLLRIGFDALRDN 428

Query: 242  E-KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
              K IFLDIACFF+G+  D+V   L+GCGF   IG  VLI++CLI + ++ + MHDLLQE
Sbjct: 429  NTKSIFLDIACFFRGHRVDFVKRILDGCGFKTDIGFSVLIDRCLIKISDDKVEMHDLLQE 488

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD--------------N 346
            +  ++V+++S  EL K+SRLW  ++   VLT + GT  VEGI LD              +
Sbjct: 489  MAHEVVRKESAYELRKQSRLWNPKDAYQVLTNNLGTGKVEGIFLDVSKIRTEKVEGMFLD 548

Query: 347  YHHENEVYLCASAKAFSKMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYP 398
                 E+ L  S+ AF++M NLRLLKI        C + LP+GLE LS+ LR L W GYP
Sbjct: 549  VSEIREIEL--SSTAFARMYNLRLLKIYNSAAGDKCTVHLPSGLESLSHELRYLHWDGYP 606

Query: 399  LKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLE 458
            L  LP N +    +E+ +  S++ +LW+G ++L  LK + LS+ E++  +PD + A NLE
Sbjct: 607  LTSLPCNFRPQNLVELNLSSSKVKQLWRGDQNLGNLKDVNLSNCEHITFLPDLSKARNLE 666

Query: 459  KLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK-------- 510
            +L L+ C  L +   S+   +KL+ L+++ C  LI LP +I    LE LNL         
Sbjct: 667  RLNLQFCKSLVKFPSSIQHLDKLVDLDLRGCKRLINLPSRINSSCLETLNLSGCANLKKC 726

Query: 511  ------------------------------------------SLPTTISGLKCLSTLDVS 528
                                                      +LP  I  LK L  +D+S
Sbjct: 727  PETAGKLTYLNLNETAVEELPQSIGELSGLVTLNLKNCKLVLNLPENIYLLKSLLIVDIS 786

Query: 529  GDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS 588
            G      FP+   ++ +L   +L GTAI  LP SI  L  L+ L+L  C  L+ LP  VS
Sbjct: 787  GCSSISRFPDFSWNIRYL---YLNGTAIEELPSSIGGLRELIYLDLVGCNRLKNLPSAVS 843

Query: 589  NLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDC 648
             L CL  L LSGCS + +FP++ R+++   EL+LDGT+I+E+PSSIE L +L  L+L +C
Sbjct: 844  KLGCLEKLDLSGCSSITEFPKVSRNIR---ELYLDGTAIREIPSSIECLCELNELHLRNC 900

Query: 649  KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI 708
            K    LPSSI  LK L+ LNLSGC +  + PE L  +  L  L +  T +    S     
Sbjct: 901  KQFEILPSSICKLKKLRRLNLSGCLQFRDFPEVLEPMVCLRYLYLEQTRITKLPS----- 955

Query: 709  PINLMRKSVALKLPSLS-------------------GLCSLRKLNLTDCNLMEGALPSDI 749
            PI  ++    L++ +                      L  LRKLNL  C+L E  +P  +
Sbjct: 956  PIGNLKGLACLEVGNCKYLEDIHCFVGLQLSKRHRVDLDCLRKLNLDGCSLSE--VPDSL 1013

Query: 750  GNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCAS 809
            G L SL+ L LS N+  ++P SI  L +L  + L +CKRLQSLP+LPP + ++ V+ C S
Sbjct: 1014 GLLSSLEVLDLSGNNLRTIPISINKLFELQYLGLRNCKRLQSLPELPPRLSKLDVDNCQS 1073

Query: 810  LVTLLD-ALKLCKSDSTMIACLDSLKL-LGNKSLAFSML-------REYLEAVSNTRQHL 860
            L  L+  +  + + +       + L+L + N+ L +S+L       R Y +         
Sbjct: 1074 LNYLVSRSSTVVEGNIFEFIFTNCLRLPVVNQILEYSLLKFQLYTKRLYHQLPDVPEGAC 1133

Query: 861  SVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCV--FHVLKNSRGNNCFG 918
            S  +PG   PEWF +Q+ GS  T    S+  N  + +G+++C V  F  + +S    C  
Sbjct: 1134 SFCLPGDVTPEWFSHQSWGSIATFQLSSHWVN-SEFLGFSLCAVIAFRSISHSLQVKCTY 1192

Query: 919  SYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNH 978
             +     + H  +  Y  G+ D+  +  S H+++        +D  L  + +    E + 
Sbjct: 1193 HFRNEHGDSHDRY-CYLYGWYDE-KRIDSAHIFV-------GFDPCLVAKEDYMFSEYSE 1243

Query: 979  VNVSFEPWLGQG-------LEVKMCGLHPVYMDEVEELDQTTNQPSRFTVYNLN 1025
            V++ F+     G        +V  CG+  +Y DE    D     P  F +Y L+
Sbjct: 1244 VSIEFQVEDMNGNLLPIDLCQVHECGVRVLYEDEKHRFDLI--MPGYFRIYPLD 1295


>gi|225465768|ref|XP_002266923.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1179

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 375/1043 (35%), Positives = 566/1043 (54%), Gaps = 110/1043 (10%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV--RE 58
            M+   +++  L+   S+DVRMIGI G+ G+GKTT+A+ VY+ I H+F+ + FL N    E
Sbjct: 190  MERHRKEMASLISIDSNDVRMIGINGIDGIGKTTLAKAVYNQIVHQFDGASFLSNFSSHE 249

Query: 59   ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            ++       L R +L + +      I ++  G  ++   L  KKVL+V+DDV    QL+ 
Sbjct: 250  MNLLQLQKQLLRDILGEDIP----RITDISKGAHVIRDMLWSKKVLVVLDDVDGTGQLEF 305

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            L  NR  FG GSRII+TSR ++LL  +G+D +Y+   LN  EA+QLF++ AF    P + 
Sbjct: 306  LVINRA-FGPGSRIIVTSRHKYLLAGYGLDALYEVKELNCKEAIQLFSLHAFHMNSPQKG 364

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             + LS  I+ Y  GLP+ALEVLGS L G+   EW S L+RLE  P  +I ++L   F GL
Sbjct: 365  FMNLSRWIVDYCKGLPIALEVLGSHLFGKKKFEWESVLQRLEKRPNKQIQNVLMRGFQGL 424

Query: 239  QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
                ++IFLD+ACFFKG D D+V   LE C F+  +GI+VL +  LI++ +N L MHDL+
Sbjct: 425  DGCHREIFLDVACFFKGEDLDFVERILEACNFYSKLGIKVLTDNSLISILDNKLLMHDLI 484

Query: 299  QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
            Q+ G +IV+ Q   E GK SRLW  E+V HVLT +TGT+ +EGI L N    NE++L  +
Sbjct: 485  QKSGWEIVREQYHTEPGKWSRLWDPEDVYHVLTTNTGTKRIEGIFL-NMFVSNEIHL--T 541

Query: 359  AKAFSKMTNLRLLKICN-----------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
            + AF KMT LRLL++             + LP+  ++ S+ LR L W G+ L+ LPSN  
Sbjct: 542  SDAFKKMTRLRLLRVYQNVENNSIVSNTVHLPHDFKFPSHELRYLHWDGWTLESLPSNFD 601

Query: 408  MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
              K +E+ + +S +  LWK  K L KL+V+ L +S++L+  P+ + AP +E LIL+GCT 
Sbjct: 602  GWKLVELSLKHSSLKHLWKKRKCLPKLEVINLGNSQHLMECPNLSFAPRVELLILDGCTS 661

Query: 468  LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDV 527
            L E+HPS+    +L ILNMK+C  L   P                  +I+GL+ L  L++
Sbjct: 662  LPEVHPSVTKLKRLTILNMKNCKKLHYFP------------------SITGLESLKVLNL 703

Query: 528  SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
            SG  K  +FPEI+E ME L +L L+GT+++ LP SI  + GL LLNL+ C++L  LP ++
Sbjct: 704  SGCSKLDKFPEIMEVMECLQKLLLDGTSLKELPPSIVHVKGLQLLNLRKCKNLRSLPNSI 763

Query: 588  SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
             +L+ L +L +SGCSKL K PE +  ++ L +L  DGT+I + P S+  L  L+ L+   
Sbjct: 764  CSLRSLETLIVSGCSKLSKLPEDLGRLQFLMKLQADGTAITQPPLSLFHLRNLKELSFRG 823

Query: 648  CKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSY 707
            CK                     G      +   L ++   E  D +G  +P+ +  YS 
Sbjct: 824  CK---------------------GSTSNSWISSLLFRLLHRENSDGTGLQLPYLSGLYS- 861

Query: 708  IPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS 767
                       LK   LSG           CNL + ++  ++G+L  L+EL LS+N+ V+
Sbjct: 862  -----------LKYLDLSG-----------CNLTDRSINDNLGHLSFLEELNLSRNNLVT 899

Query: 768  LPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMI 827
            +P  +  LS L  + +  CK LQ + +LPP+I+ +    C SL +L           +  
Sbjct: 900  VPAEVNRLSHLRVLSVNQCKSLQEISKLPPSIKLLDAGDCISLESLSVLSPQSPQYLSSS 959

Query: 828  ACLD--SLKLLGNKSLAFSMLREYLEAVSNTRQHL------SVVVPGSEIPEWFMYQNEG 879
            +CL   + KL    +LA       LE +   RQ+       S+V+PGS IPEWF + + G
Sbjct: 960  SCLRPVTFKLPNCFALAQDNGATILEKL---RQNFLPEIEYSIVLPGSTIPEWFQHPSIG 1016

Query: 880  SSITVTRPSNLYNKKKLVGYAICCVFHVLKNS--RGNNCFGSYPTHQLNCHIGHGIYGIG 937
            SS+T+  P N +N K  +G+A+C VF + ++   +G+         +   ++   I    
Sbjct: 1017 SSVTIELPPNWHN-KDFLGFALCSVFSLEEDEIIQGSGLVCCNFEFREGPYLSSSISWTH 1075

Query: 938  FRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCG 997
              D+  +  +DH+WL+Y   Q    + +P  S+L  F       S     G    VK CG
Sbjct: 1076 SGDRVIE--TDHIWLVY---QPGAKLMIPKSSSLNKFRKITAYFSLS---GASHVVKNCG 1127

Query: 998  LHPVYMDEVEELDQTTNQPSRFT 1020
            +H +Y       D+  N  +R+T
Sbjct: 1128 IHLIYAR-----DKKVNYQTRYT 1145


>gi|9759045|dbj|BAB09567.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1295

 Score =  533 bits (1372), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 379/1097 (34%), Positives = 572/1097 (52%), Gaps = 133/1097 (12%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M S  + L+ ++     DVRM+GI GMGG+GKTTIA+ +Y+ +S +F+   F++NV+E+ 
Sbjct: 189  MSSHMDFLQSMISIVDKDVRMLGIWGMGGVGKTTIAKYLYNQLSGQFQVHCFMENVKEVC 248

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            ++ G+  LQ + L ++ +  D   W+     +++  R + K V +V+DDV   +QL  L 
Sbjct: 249  NRYGVRRLQVEFLCRMFQERDKEAWSSVSCCNIIKERFRHKMVFIVLDDVDRSEQLNELV 308

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
                WFG GSRII+T+RD HLL +HG++ VYK   L   EALQLF   AF+    L    
Sbjct: 309  KETGWFGPGSRIIVTTRDRHLLLSHGINLVYKVKCLPKKEALQLFCNYAFREEIILPHGF 368

Query: 181  Q-LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            + LS + + YA GLPLAL VLGSFL  RS  EW STL RL+  P S+I+++L++S+DGL 
Sbjct: 369  EELSVQAVNYASGLPLALRVLGSFLYRRSQIEWESTLARLKTYPHSDIMEVLRVSYDGLD 428

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
            E EK IFL I+CF+     DYV   L+ CG+   IGI +L EK LI   N  + +HDLL+
Sbjct: 429  EQEKAIFLYISCFYNMKQVDYVRKLLDLCGYAAEIGITILTEKSLIVESNGCVKIHDLLE 488

Query: 300  ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
            ++G+++V++Q+     +R  LW  E++CH+L+E++GT+LVEGI L N    +EV+  AS 
Sbjct: 489  QMGRELVRQQAVNNPAQRLLLWDPEDICHLLSENSGTQLVEGISL-NLSEISEVF--ASD 545

Query: 360  KAFSKMTNLRLLKICNL--------QLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
            +AF  ++NL+LL   +L         LPNGL YL  +LR L W GYPLK +PS    +  
Sbjct: 546  RAFEGLSNLKLLNFYDLSFDGETRVHLPNGLSYLPRKLRYLRWDGYPLKTMPSRFFPEFL 605

Query: 412  IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
            +E+ M  S + +LW GI+ L  LK M LS  + L+ +PD + A NLE+L L  C  L E+
Sbjct: 606  VELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVPDLSKATNLEELNLSYCQSLVEV 665

Query: 472  HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDL 531
             PS+     L    + +C  L  +P  I++KSLE                  T+ +SG  
Sbjct: 666  TPSIKNLKGLSCFYLTNCIQLKDIPIGIILKSLE------------------TVGMSGCS 707

Query: 532  KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
              + FPEI  +   L   +L  T I  LP SI  LS LV L++ +C+ L  LP  + +L 
Sbjct: 708  SLKHFPEISWNTRRL---YLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLV 764

Query: 592  CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG---------------------TSIKEV 630
             L+SL L GC +L+  P+ ++++  L  L + G                     TSI+E+
Sbjct: 765  SLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLRISETSIEEI 824

Query: 631  PSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLEN------------- 677
            P+ I  L++L  L++S+ K L  LP SI  L+SL+ L LSGC  LE+             
Sbjct: 825  PARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLR 884

Query: 678  -----------VPETLGQIESLEELDISGTAV---PHSTSWYSYIPINLMRKSVALK--- 720
                       +PE +G + +LE L  S T +   P S +  + + +  +  S       
Sbjct: 885  WFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGL 944

Query: 721  ----LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLS 776
                 P LS    LR L+L++ N+ E  +P+ IGNL +L EL LS N+F  +P SI  L+
Sbjct: 945  LHSLCPPLSRFDDLRALSLSNMNMTE--IPNSIGNLWNLLELDLSGNNFEFIPASIKRLT 1002

Query: 777  KLLNIELEDCKRLQSLP-QLPPNIRQVRVNGCASLVTLLDAL-KLCKSDSTMIACLDSLK 834
            +L  + L +C+RLQ+LP +LP  +  + ++ C SLV++     + C        C    K
Sbjct: 1003 RLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVASNC---YK 1059

Query: 835  LLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKK 894
            L      A  ++   L+  S   +H     PGS+IP  F +Q  G S+ +  P +  +  
Sbjct: 1060 L---DQAAQILIHRNLKLESAKPEH--SYFPGSDIPTCFNHQVMGPSLNIQLPQS-ESSS 1113

Query: 895  KLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYG-----------IGFRDKFG 943
             ++G++ C +  V          G YP + L  H    +             + + D   
Sbjct: 1114 DILGFSACIMIGV---------DGQYPMNNLKIHCSCILKDADACELVVMDEVWYPDPKA 1164

Query: 944  QA----GSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLH 999
                  GSDHL L     +TC  +    E+  E    N    SF P LG   EVK C +H
Sbjct: 1165 FTNMYFGSDHLLLF---SRTCTSMEAYSEALFEFSVENTEGDSFSP-LG---EVKKCAVH 1217

Query: 1000 PVYM-DEVEELDQTTNQ 1015
             + + D ++E    +++
Sbjct: 1218 LISLKDMMQEFSNDSDK 1234


>gi|15238008|ref|NP_197270.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
 gi|332005072|gb|AED92455.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
          Length = 1294

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 379/1097 (34%), Positives = 572/1097 (52%), Gaps = 133/1097 (12%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M S  + L+ ++     DVRM+GI GMGG+GKTTIA+ +Y+ +S +F+   F++NV+E+ 
Sbjct: 188  MSSHMDFLQSMISIVDKDVRMLGIWGMGGVGKTTIAKYLYNQLSGQFQVHCFMENVKEVC 247

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            ++ G+  LQ + L ++ +  D   W+     +++  R + K V +V+DDV   +QL  L 
Sbjct: 248  NRYGVRRLQVEFLCRMFQERDKEAWSSVSCCNIIKERFRHKMVFIVLDDVDRSEQLNELV 307

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
                WFG GSRII+T+RD HLL +HG++ VYK   L   EALQLF   AF+    L    
Sbjct: 308  KETGWFGPGSRIIVTTRDRHLLLSHGINLVYKVKCLPKKEALQLFCNYAFREEIILPHGF 367

Query: 181  Q-LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            + LS + + YA GLPLAL VLGSFL  RS  EW STL RL+  P S+I+++L++S+DGL 
Sbjct: 368  EELSVQAVNYASGLPLALRVLGSFLYRRSQIEWESTLARLKTYPHSDIMEVLRVSYDGLD 427

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
            E EK IFL I+CF+     DYV   L+ CG+   IGI +L EK LI   N  + +HDLL+
Sbjct: 428  EQEKAIFLYISCFYNMKQVDYVRKLLDLCGYAAEIGITILTEKSLIVESNGCVKIHDLLE 487

Query: 300  ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
            ++G+++V++Q+     +R  LW  E++CH+L+E++GT+LVEGI L N    +EV+  AS 
Sbjct: 488  QMGRELVRQQAVNNPAQRLLLWDPEDICHLLSENSGTQLVEGISL-NLSEISEVF--ASD 544

Query: 360  KAFSKMTNLRLLKICNL--------QLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
            +AF  ++NL+LL   +L         LPNGL YL  +LR L W GYPLK +PS    +  
Sbjct: 545  RAFEGLSNLKLLNFYDLSFDGETRVHLPNGLSYLPRKLRYLRWDGYPLKTMPSRFFPEFL 604

Query: 412  IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
            +E+ M  S + +LW GI+ L  LK M LS  + L+ +PD + A NLE+L L  C  L E+
Sbjct: 605  VELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVPDLSKATNLEELNLSYCQSLVEV 664

Query: 472  HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDL 531
             PS+     L    + +C  L  +P  I++KSLE                  T+ +SG  
Sbjct: 665  TPSIKNLKGLSCFYLTNCIQLKDIPIGIILKSLE------------------TVGMSGCS 706

Query: 532  KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
              + FPEI  +   L   +L  T I  LP SI  LS LV L++ +C+ L  LP  + +L 
Sbjct: 707  SLKHFPEISWNTRRL---YLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLV 763

Query: 592  CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG---------------------TSIKEV 630
             L+SL L GC +L+  P+ ++++  L  L + G                     TSI+E+
Sbjct: 764  SLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLRISETSIEEI 823

Query: 631  PSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLEN------------- 677
            P+ I  L++L  L++S+ K L  LP SI  L+SL+ L LSGC  LE+             
Sbjct: 824  PARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLR 883

Query: 678  -----------VPETLGQIESLEELDISGTAV---PHSTSWYSYIPINLMRKSVALK--- 720
                       +PE +G + +LE L  S T +   P S +  + + +  +  S       
Sbjct: 884  WFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGL 943

Query: 721  ----LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLS 776
                 P LS    LR L+L++ N+ E  +P+ IGNL +L EL LS N+F  +P SI  L+
Sbjct: 944  LHSLCPPLSRFDDLRALSLSNMNMTE--IPNSIGNLWNLLELDLSGNNFEFIPASIKRLT 1001

Query: 777  KLLNIELEDCKRLQSLP-QLPPNIRQVRVNGCASLVTLLDAL-KLCKSDSTMIACLDSLK 834
            +L  + L +C+RLQ+LP +LP  +  + ++ C SLV++     + C        C    K
Sbjct: 1002 RLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVASNC---YK 1058

Query: 835  LLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKK 894
            L      A  ++   L+  S   +H     PGS+IP  F +Q  G S+ +  P +  +  
Sbjct: 1059 L---DQAAQILIHRNLKLESAKPEH--SYFPGSDIPTCFNHQVMGPSLNIQLPQS-ESSS 1112

Query: 895  KLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYG-----------IGFRDKFG 943
             ++G++ C +  V          G YP + L  H    +             + + D   
Sbjct: 1113 DILGFSACIMIGV---------DGQYPMNNLKIHCSCILKDADACELVVMDEVWYPDPKA 1163

Query: 944  QA----GSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLH 999
                  GSDHL L     +TC  +    E+  E    N    SF P LG   EVK C +H
Sbjct: 1164 FTNMYFGSDHLLLF---SRTCTSMEAYSEALFEFSVENTEGDSFSP-LG---EVKKCAVH 1216

Query: 1000 PVYM-DEVEELDQTTNQ 1015
             + + D ++E    +++
Sbjct: 1217 LISLKDMMQEFSNDSDK 1233


>gi|359496028|ref|XP_003635135.1| PREDICTED: putative disease resistance protein At4g11170-like [Vitis
            vinifera]
 gi|296090593|emb|CBI40962.3| unnamed protein product [Vitis vinifera]
          Length = 1284

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 378/1044 (36%), Positives = 556/1044 (53%), Gaps = 98/1044 (9%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +DS  +++  L+   + DVRM+GI GMGG+GKTT+AR +Y  IS +FE   FLD+V +++
Sbjct: 202  IDSHIQEVETLLCLEADDVRMVGIWGMGGIGKTTLARAIYKKISDKFEDRCFLDDVADLA 261

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
             KG    L++ LLS +L+       N+      L +RL  KKVL+VID+V + + L++L 
Sbjct: 262  RKGQ--DLKKLLLSNVLRDK-----NIDVTAPSLKARLHFKKVLIVIDNVNNREILENLV 314

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            G   WFG  SRIIIT+RD HLL  +GV++VY+   L  ++A +LFN  AF+   P ++ +
Sbjct: 315  GGPNWFGPKSRIIITTRDTHLLAAYGVNDVYEVQKLQDEKATKLFNHYAFRNDTPSRDVI 374

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            +L   +I YA GLPLAL+VLGS L  +S DEW   L +L+  P  EI ++LQ SFD L  
Sbjct: 375  ELIDHVIAYAQGLPLALKVLGSSLCKKSKDEWLCELNKLQKIPNMEIQNVLQTSFDELDY 434

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             ++ +FLDIA  F G  +D+V + L  CGF P+ GIR LI+K LI+  ++ L +HDLL E
Sbjct: 435  YQQNLFLDIAFVFWGELKDFVIDILNSCGFFPISGIRTLIDKSLISYIDDQLHIHDLLIE 494

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G++IV++  PEE GKRSRLW ++++CHVL   TGTE VE I LD  H   E+    +  
Sbjct: 495  MGKEIVRQTFPEEPGKRSRLWMQQDICHVLENLTGTEKVEVIDLD-LHGLKEIRF--TTA 551

Query: 361  AFSKMTNLRLLKI------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
            AF+KMT LR+L+I      C + + +  ++  + LR L W  YPLK LPS+ +    + +
Sbjct: 552  AFAKMTKLRVLQIDAAQMQCEVHISDDFKFHYDELRYLFWDYYPLKLLPSDFKSKNLVCL 611

Query: 415  YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
             M  S + +LW+G K  + LK M LS S+ L   PDF+   NLE LIL+GCT+L +IH S
Sbjct: 612  RMPNSHLTQLWEGNKVFESLKYMDLSDSKYLTETPDFSRVTNLECLILDGCTQLCKIHLS 671

Query: 475  LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFR 534
            L   +KL +L++++C +L   PG                  I  L  L TL +SG  K  
Sbjct: 672  LGTLDKLTLLSLENCINLKHFPG------------------ICQLVSLKTLILSGCPKLE 713

Query: 535  EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
            +FP+I +HM  LS+L+L+GTAI  LP SI   + LVLL+LKNCR L  LP ++  L  L+
Sbjct: 714  KFPDIAQHMPCLSKLYLDGTAITELPSSIAYATELVLLDLKNCRKLWSLPSSICQLTLLK 773

Query: 595  SLKLSGCSKLKK----------FPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELL 643
            +L LSGCS L K           P  +  + +L  L L    S++ +P+   L + L ++
Sbjct: 774  TLSLSGCSDLGKCEVNSGNLDALPRTLDKLCNLWRLELQNCRSLRALPA---LPSSLAII 830

Query: 644  NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTS 703
            N  +C++L     +   L S+KTL LSGC KLE  P+    +  L +L + GTA+    S
Sbjct: 831  NARNCESL-EDAGAFSQLVSVKTLILSGCPKLEKFPDIAQHMPCLSKLYLDGTAITELPS 889

Query: 704  WYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCS-LKELYLSK 762
              SY        +  L L  L     L  L  + C L      S  G  CS L +  ++ 
Sbjct: 890  SISY--------ATELVLLDLKNCRKLWSLPSSICQLTLLETLSLSG--CSDLGKCEVNS 939

Query: 763  NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLL-------- 814
             +  +LP ++  L  L  +EL++CK L++LP LP ++  +  + C SL  +         
Sbjct: 940  GNLDALPRTLDQLRNLWRLELQNCKSLRALPVLPSSLEFINASNCESLEDISPQSVFSQL 999

Query: 815  ------DALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSE 868
                  +  KL K  S M   L S+    ++    S   E    V       S V PGS 
Sbjct: 1000 RRSMFGNCFKLTKFQSRMERDLQSMAAHVDQKKWRSTFEEQSPVV---HVLFSTVFPGSG 1056

Query: 869  IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKN--SRGNNCFGSYPTHQLN 926
            IP+WF +++EG  I +    N Y+    +G+A   V    K   + G   +        N
Sbjct: 1057 IPDWFAHRSEGHEINIQVSQNWYS-SYFLGFAFSAVVAPEKEPLTSGWITYCDLRCGAFN 1115

Query: 927  CHI-GHGIYGIGFRDKFGQA------GSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHV 979
              +  +GI+   F D + +        SDH+WL Y          +P      P + + +
Sbjct: 1116 SELKSNGIFSFSFVDDWTEQLEHITIASDHMWLAY----------VPSFLGFSPEKWSCI 1165

Query: 980  NVSFEPWLGQGLEVKMCGLHPVYM 1003
              SF     +   VK CG+ PVY+
Sbjct: 1166 KFSFRT-DKESCIVKRCGVCPVYI 1188


>gi|224116230|ref|XP_002331993.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832117|gb|EEE70594.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1308

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 314/654 (48%), Positives = 429/654 (65%), Gaps = 25/654 (3%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVRE-ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDG 90
           KTT+ARV+YD I  +FE S FL+N+RE  + K G   LQ QLLS++L +   S+W+ + G
Sbjct: 231 KTTVARVLYDRIRWQFEGSCFLENIREDFAKKDGPRRLQEQLLSEIL-MERASVWDSYRG 289

Query: 91  IDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEV 150
           I+M+  RL+ KK+LL++DDV D +QL+ LA    WFG GSRIIITSRD+ +L  +GVD +
Sbjct: 290 IEMIKRRLRLKKILLLLDDVDDKEQLKFLAEEPGWFGPGSRIIITSRDKQVLTRNGVDRI 349

Query: 151 YKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVD 210
           Y+   LN D+AL LF+ KAFK  QP ++ V+LS +++ YA GLPLALEV+GSF+ GRS+ 
Sbjct: 350 YEAEKLNDDDALTLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFMHGRSIL 409

Query: 211 EWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGF 270
           EWRS + R+      EI+D+L+ISFDGL ELEKKIFLDIACF KG  +D +   L+ CGF
Sbjct: 410 EWRSAINRIYDILDREIIDVLRISFDGLHELEKKIFLDIACFLKGFKKDRIIRILDSCGF 469

Query: 271 HPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVL 330
           H  IG +VLIEK LI+V  + +WMH+LLQ +G++IV+ + P+E GKRSRLW  ++V   L
Sbjct: 470 HAHIGTQVLIEKSLISVSRDRVWMHNLLQIMGKEIVRCEDPKEPGKRSRLWTYKDVFLAL 529

Query: 331 TESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLR 390
            ++TG E +E I LD    +   +   + KAFSKM+ LRLLKI N+QL  G E LSN LR
Sbjct: 530 MDNTGKEKIEAIFLDMPGIKEAQW---NMKAFSKMSRLRLLKIDNVQLSEGPEDLSNELR 586

Query: 391 LLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD 450
            + W  YP K LPS LQ+D+ +E++M  S + +LW G K    LK++ LS+S  L + PD
Sbjct: 587 FIEWHSYPSKSLPSGLQVDELVELHMANSSLEQLWCGCKSAVNLKIINLSNSLYLTKTPD 646

Query: 451 FTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK 510
            TG PNLE LILEGCT L E+HPSL  H KL  +N+ +C S+  LP  + M+SL      
Sbjct: 647 LTGIPNLESLILEGCTSLSEVHPSLAHHKKLQYVNLVNCKSIRILPNNLEMESLN----- 701

Query: 511 SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLV 570
                      + TLD  G  K  +FP+IV +M  L  L L+ T I  L  SI  L GL 
Sbjct: 702 -----------VFTLD--GCSKLEKFPDIVGNMNELMVLRLDETGITKLSSSIHHLIGLG 748

Query: 571 LLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEV 630
           LL++ +C++LE +P ++  LK L+ L LSGCS+LK  PE +  ++ L E    GTSI+++
Sbjct: 749 LLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESLDEFDASGTSIRQL 808

Query: 631 PSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLEN-VPETLG 683
           P+SI +L  L++L+L  CK +V LP S+  L SL+ L L  C   E  +PE +G
Sbjct: 809 PASIFILKNLKVLSLDGCKRIVVLP-SLSGLCSLEVLGLRACNLREGALPEDIG 861



 Score =  203 bits (516), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 163/426 (38%), Positives = 226/426 (53%), Gaps = 76/426 (17%)

Query: 494 TLPGKILMKSLEKLNL--KSLPTTISGLKC---LSTLDVSGDLKFREFPEIVEHMEHLSE 548
           +LP  + +  L +L++   SL     G K    L  +++S  L   + P++   + +L  
Sbjct: 597 SLPSGLQVDELVELHMANSSLEQLWCGCKSAVNLKIINLSNSLYLTKTPDLT-GIPNLES 655

Query: 549 LHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKF 607
           L LEG T++  +  S+     L  +NL NC+S+ ILP  +  ++ L    L GCSKL+KF
Sbjct: 656 LILEGCTSLSEVHPSLAHHKKLQYVNLVNCKSIRILPNNL-EMESLNVFTLDGCSKLEKF 714

Query: 608 PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL 667
           P+IV +M +L  L LD T I ++ SSI  L  L LL+++ CKNL  +PSSI  LKSLK L
Sbjct: 715 PDIVGNMNELMVLRLDETGITKLSSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKL 774

Query: 668 NLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYIPINLMRKSV-----AL 719
           +LSGC +L+ +PE LG++ESL+E D SGT++   P S     +I  NL   S+      +
Sbjct: 775 DLSGCSELKYIPEKLGEVESLDEFDASGTSIRQLPASI----FILKNLKVLSLDGCKRIV 830

Query: 720 KLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLL 779
            LPSLSGLCSL  L L  CNL EGALP DIG L SLK L LS+N+FVSLP SI  L +L 
Sbjct: 831 VLPSLSGLCSLEVLGLRACNLREGALPEDIGCLSSLKSLDLSQNNFVSLPKSINQLFELE 890

Query: 780 NIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNK 839
            + LEDC  L+SLP++P  ++                                       
Sbjct: 891 MLVLEDCTMLESLPEVPSKVQT-------------------------------------- 912

Query: 840 SLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGY 899
                        +SN R   S+ VPG+EI  WF +Q+EGSSI+V  PS        +G+
Sbjct: 913 ------------GLSNPRPGFSIAVPGNEILGWFNHQSEGSSISVQVPS------WSMGF 954

Query: 900 AICCVF 905
             C  F
Sbjct: 955 VACVAF 960


>gi|105922738|gb|ABF81434.1| TIR-NBS-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1307

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 314/654 (48%), Positives = 429/654 (65%), Gaps = 25/654 (3%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVRE-ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDG 90
           KTT+ARV+YD I  +FE S FL+N+RE  + K G   LQ QLLS++L +   S+W+ + G
Sbjct: 256 KTTVARVLYDRIRWQFEGSCFLENIREDFAKKDGPRRLQEQLLSEIL-MERASVWDSYRG 314

Query: 91  IDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEV 150
           I+M+  RL+ KK+LL++DDV D +QL+ LA    WFG GSRIIITSRD+ +L  +GVD +
Sbjct: 315 IEMIKRRLRLKKILLLLDDVDDKEQLKFLAEEPGWFGPGSRIIITSRDKQVLTRNGVDRI 374

Query: 151 YKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVD 210
           Y+   LN D+AL LF+ KAFK  QP ++ V+LS +++ YA GLPLALEV+GSF+ GRS+ 
Sbjct: 375 YEAEKLNDDDALTLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFMHGRSIL 434

Query: 211 EWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGF 270
           EWRS + R+      EI+D+L+ISFDGL ELEKKIFLDIACF KG  +D +   L+ CGF
Sbjct: 435 EWRSAINRIYDILDREIIDVLRISFDGLHELEKKIFLDIACFLKGFKKDRIIRILDSCGF 494

Query: 271 HPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVL 330
           H  IG +VLIEK LI+V  + +WMH+LLQ +G++IV+ + P+E GKRSRLW  ++V   L
Sbjct: 495 HAHIGTQVLIEKSLISVSRDRVWMHNLLQIMGKEIVRCEDPKEPGKRSRLWTYKDVFLAL 554

Query: 331 TESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLR 390
            ++TG E +E I LD    +   +   + KAFSKM+ LRLLKI N+QL  G E LSN LR
Sbjct: 555 MDNTGKEKIEAIFLDMPGIKEAQW---NMKAFSKMSRLRLLKIDNVQLSEGPEDLSNELR 611

Query: 391 LLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD 450
            + W  YP K LPS LQ+D+ +E++M  S + +LW G K    LK++ LS+S  L + PD
Sbjct: 612 FIEWHSYPSKSLPSGLQVDELVELHMANSSLEQLWCGCKSAVNLKIINLSNSLYLTKTPD 671

Query: 451 FTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK 510
            TG PNLE LILEGCT L E+HPSL  H KL  +N+ +C S+  LP  + M+SL      
Sbjct: 672 LTGIPNLESLILEGCTSLSEVHPSLAHHKKLQYVNLVNCKSIRILPNNLEMESLN----- 726

Query: 511 SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLV 570
                      + TLD  G  K  +FP+IV +M  L  L L+ T I  L  SI  L GL 
Sbjct: 727 -----------VFTLD--GCSKLEKFPDIVGNMNELMVLRLDETGITKLSSSIHHLIGLG 773

Query: 571 LLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEV 630
           LL++ +C++LE +P ++  LK L+ L LSGCS+LK  PE +  ++ L E    GTSI+++
Sbjct: 774 LLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESLDEFDASGTSIRQL 833

Query: 631 PSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLEN-VPETLG 683
           P+SI +L  L++L+L  CK +V LP S+  L SL+ L L  C   E  +PE +G
Sbjct: 834 PASIFILKNLKVLSLDGCKRIVVLP-SLSGLCSLEVLGLRACNLREGALPEDIG 886



 Score =  187 bits (474), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 144/364 (39%), Positives = 197/364 (54%), Gaps = 65/364 (17%)

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSL 580
           L  +++S  L   + P++   + +L  L LEG T++  +  S+     L  +NL NC+S+
Sbjct: 655 LKIINLSNSLYLTKTPDLT-GIPNLESLILEGCTSLSEVHPSLAHHKKLQYVNLVNCKSI 713

Query: 581 EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
            ILP  +  ++ L    L GCSKL+KFP+IV +M +L  L LD T I ++ SSI  L  L
Sbjct: 714 RILPNNL-EMESLNVFTLDGCSKLEKFPDIVGNMNELMVLRLDETGITKLSSSIHHLIGL 772

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV-- 698
            LL+++ CKNL  +PSSI  LKSLK L+LSGC +L+ +PE LG++ESL+E D SGT++  
Sbjct: 773 GLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESLDEFDASGTSIRQ 832

Query: 699 -PHSTSWYSYIPINLMRKSV-----ALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNL 752
            P S     +I  NL   S+      + LPSLSGLCSL  L L  CNL EGALP DIG L
Sbjct: 833 LPASI----FILKNLKVLSLDGCKRIVVLPSLSGLCSLEVLGLRACNLREGALPEDIGCL 888

Query: 753 CSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVT 812
            SLK L LS+N+FVSLP SI  L +L  + LEDC  L+SLP++P  ++            
Sbjct: 889 SSLKSLDLSQNNFVSLPKSINQLFELEMLVLEDCTMLESLPEVPSKVQT----------- 937

Query: 813 LLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEW 872
                                                   +SN R   S+ VPG+EI  W
Sbjct: 938 ---------------------------------------GLSNPRPGFSIAVPGNEILGW 958

Query: 873 FMYQ 876
           F +Q
Sbjct: 959 FNHQ 962


>gi|227438239|gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2726

 Score =  527 bits (1358), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 354/960 (36%), Positives = 526/960 (54%), Gaps = 90/960 (9%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M S  + L+ +M     DVR +GI GMGG+GKTTIA+ +Y+ +S  F+A  F++NV+E+ 
Sbjct: 202  MSSHMDFLQSMMSIEEQDVRTVGIWGMGGVGKTTIAKYLYNKLSSRFQAHCFMENVKEVC 261

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            ++ G+  LQ + L ++ +  D+          M+  R +RK+VL+V+DDV   +QL  L 
Sbjct: 262  NRYGVERLQGEFLCRMFRERDS-----VSCSSMIKERFRRKRVLIVLDDVDRSEQLDGLV 316

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
                WFG GSRII+T+RD HLL +HG++ +YK   L   EAL LF   AF+      E  
Sbjct: 317  KETGWFGPGSRIIVTTRDRHLLVSHGIELIYKVKCLPEKEALHLFCNYAFRNETIAPEFR 376

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
             L+ + + YA GLPLAL VLGSFL  R   EW STL RLE  P S+I+++L++S+DGL E
Sbjct: 377  VLAVQAVNYAFGLPLALRVLGSFLYRRGEREWESTLARLETSPHSDIMEVLRVSYDGLDE 436

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             EK IFL I+CF+     DY T  L+ CG+   IGI VL EK LI + N  + MHDL+++
Sbjct: 437  QEKAIFLYISCFYNMKHVDYATRLLDICGYAAEIGITVLTEKSLIVISNGCIKMHDLVEQ 496

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G+++V+RQ+     +R  LW+ E++C +L+E+TGT +VEG+ L N    +EV   AS +
Sbjct: 497  MGRELVRRQA-----ERFLLWRPEDICDLLSETTGTSVVEGMSL-NMSEVSEV--LASDQ 548

Query: 361  AFSKMTNLRLLKICNL--------QLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
             F  ++NL+LL   +L         LPNGL YL  +LR L W GYPL  LPS    +  +
Sbjct: 549  GFEGLSNLKLLNFYDLSYDGETRVHLPNGLTYLPRKLRYLRWDGYPLNSLPSRFHPEFLV 608

Query: 413  EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
            E++M  S +  LW GI+ L KLK M LS  + LI +PD + A NLE+L L  C  L E+ 
Sbjct: 609  ELFMSNSHLHYLWNGIQPLRKLKKMDLSRCKYLIEIPDLSKATNLEELNLSYCQSLTEVT 668

Query: 473  PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG--- 529
            PS+    KL    + +CT L  +P  I +KSLE + +       S L        +    
Sbjct: 669  PSIKNLQKLYCFYLTNCTKLKKIPSGIALKSLETVGMNG----CSSLMHFPEFSWNARRL 724

Query: 530  ---DLKFREFP-EIVEHMEHLSELHL-EGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
                 K  E P  ++  +  L EL + +  +IR LP S++ L  L  L+L  C+ LE LP
Sbjct: 725  YLSSTKIEELPSSMISRLSCLVELDMSDCQSIRTLPSSVKHLVSLKSLSLNGCKHLENLP 784

Query: 585  VTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLN 644
             ++ +L CL +L++SGC  + +FP   R  K++  L +  TSI EVP+ I  L++L  L+
Sbjct: 785  DSLLSLTCLETLEVSGCLNINEFP---RLAKNIEVLRISETSINEVPARICDLSQLRSLD 841

Query: 645  LSDCKNLVRLPSSIIALKSLKTLNLSGCFKLEN------------------------VPE 680
            +S  + L  LP SI  L+SL+ L LSGC  LE+                        +PE
Sbjct: 842  ISGNEKLKSLPVSISELRSLEKLKLSGCCVLESLPPEICQTMSCLRWLDLERTSIKELPE 901

Query: 681  TLGQIESLEELDISGTAV---PHSTSWYSYIPI----NLMRKSVALK--LPSLSGLCSLR 731
             +G + +LE L    TA+   P S +    + +    N    S  L    P LS    LR
Sbjct: 902  NIGNLIALEVLQAGRTAIRRAPLSIARLERLQVLAIGNSFYTSQGLHSLCPHLSIFNDLR 961

Query: 732  KLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQS 791
             L L++ N++E  +P+ IGNL SL EL LS N+F  +P SI  L++L  +++ +C+RLQ+
Sbjct: 962  ALCLSNMNMIE--IPNSIGNLWSLSELDLSGNNFEHIPASIRRLTRLSRLDVNNCQRLQA 1019

Query: 792  LP-QLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSL---AFSMLR 847
            LP  LP  +  +  +GC SLV++    K C        CL  L       L   A  ++ 
Sbjct: 1020 LPDDLPRRLLYIYAHGCTSLVSISGCFKPC--------CLRKLVASNCYKLDQEAQILIH 1071

Query: 848  EYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHV 907
              ++  +   +H     PG ++P  F +Q  GSS+ + +PS+      ++G++ C +  V
Sbjct: 1072 RNMKLDAAKPEH--SYFPGRDVPSCFNHQAMGSSLRIRQPSS-----DILGFSACIMIGV 1124


>gi|298204609|emb|CBI23884.3| unnamed protein product [Vitis vinifera]
          Length = 1176

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 378/1108 (34%), Positives = 565/1108 (50%), Gaps = 165/1108 (14%)

Query: 3    SRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK 62
            SR +++   +   SSDVR++GICG+GG+GKTTIA+VVY+ +S EFE   FL+N+ E+S+ 
Sbjct: 99   SRVKEMILRLHMESSDVRIVGICGVGGIGKTTIAKVVYNELSCEFECMSFLENIGEVSNT 158

Query: 63   GGLVSLQRQLLSQLLK-LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAG 121
             GL  LQ QLL  +L+     ++  V     M+   L  K+VL+V+DDV    QL+ L G
Sbjct: 159  QGLSHLQNQLLVDVLEGEVSQNMNGVAHKASMIKDILSSKRVLMVLDDVDHPSQLEYLLG 218

Query: 122  NREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQ 181
            +REW G GSR+IIT+R++H+L    VD +Y+  GLN++E  +LF++ AFK   P  +   
Sbjct: 219  HREWLGEGSRVIITTRNKHVLAVQKVDNLYEVKGLNFEEDCELFSLYAFKQNLPKSDYRN 278

Query: 182  LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQEL 241
            L+ R++ Y  GLPLAL+VLGS L  +++ EW S L +L+ EP +EI ++L+ S+DGL   
Sbjct: 279  LACRVVGYCQGLPLALKVLGSLLFNKTIPEWESELHKLDREPEAEIHNVLKRSYDGLDRT 338

Query: 242  EKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQEL 301
            EK IFLD+ACFFKG DRD+V+  L+GC FH   GIR L +KCLIT+  N + MHDL+Q +
Sbjct: 339  EKNIFLDVACFFKGEDRDFVSRILDGCDFHAKRGIRNLNDKCLITLPYNEIRMHDLIQHM 398

Query: 302  GQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKA 361
            G +IV+ + P+E  K SRLW   +    LT   G + VE I LD    +    +C S+  
Sbjct: 399  GWEIVREKFPDEPNKWSRLWDPCDFERALTAYEGIKRVETISLDLSKSKG---VCVSSNV 455

Query: 362  FSKMTNLRLLKI-----------------------------CNLQLPNGLEYLSNRLRLL 392
            F+K T LRLLK+                               +QL  G ++ S  LR L
Sbjct: 456  FAKTTRLRLLKVHSGFHIDHKYGDLDSEEEMYYCYGVIAHASKMQLDRGFKFPSYELRYL 515

Query: 393  GWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFT 452
             W GYPL FLPSN    K +E+++  S I  LW G K L++LKV+ LS+S  LI+M +F+
Sbjct: 516  CWDGYPLDFLPSNFDGGKLVELHLHCSNIKRLWLGNKDLERLKVIDLSYSRKLIQMSEFS 575

Query: 453  GAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSL 512
              PNLE L L GC  L +IHPS+    KL  L+++ C                   LK+L
Sbjct: 576  RMPNLESLFLNGCVSLIDIHPSVGNLKKLTTLSLRSCDK-----------------LKNL 618

Query: 513  PTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLL 572
            P +I  L+ L  L++S   KF +FP    +M+ L +LHL+ TAI+ LP SI  L  L +L
Sbjct: 619  PDSIWDLESLEILNLSYCSKFEKFPGKGGNMKSLRKLHLKDTAIKDLPDSIGDLESLEIL 678

Query: 573  NLKNCRSLEI-----------------------LPVTVSNLKCLRSLKLSGCSKLKKFPE 609
            +L +C   E                        LP ++ +L+ L SL +SG SK +KFPE
Sbjct: 679  DLSDCSKFEKFPEKGGNMKSLNQLLLRNTAIKDLPDSIGDLESLESLDVSG-SKFEKFPE 737

Query: 610  IVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNL 669
               +MK L++L L  T+IK++P SI  L  LE L+LSDC    + P     +KSLK L L
Sbjct: 738  KGGNMKSLNQLLLRNTAIKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLKKLRL 797

Query: 670  SGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCS 729
                 ++++P+++G ++SLE LD+S                                   
Sbjct: 798  RNT-AIKDLPDSIGDLKSLEFLDLS----------------------------------- 821

Query: 730  LRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRL 789
                   DC+  E   P   GN+  L+EL+L   +   LPT+I+ L KL  + L DC  L
Sbjct: 822  -------DCSKFE-KFPEKGGNMKRLRELHLKITAIKDLPTNISRLKKLKRLVLSDCSDL 873

Query: 790  QS--LPQLPPNIRQVRVNGC--ASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSM 845
                +     N++++ ++ C  A  + +L          + +  +D+      + L+  +
Sbjct: 874  WEGLISNQLCNLQKLNISQCKMAGQILVL---------PSSLEEIDAYHCTSKEDLSGLL 924

Query: 846  LREYLEAVSNTRQHL------SVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGY 899
               +L  + +T + L      +V+   + IPEW  YQN GS +T   P+N Y     +G+
Sbjct: 925  WLCHLNWLKSTTEELKCWKLVAVIRESNGIPEWIRYQNMGSEVTTELPTNWYEDPHFLGF 984

Query: 900  AICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDK---FGQAGSDHLWLLYLS 956
             + CV+  +  S  +     Y    L C +     G  F+ K   +   G+       L 
Sbjct: 985  VVSCVYRHIPTSDFD-----YRDVDLMCELNLHGNGFEFKGKCYRYDSPGN----FKDLI 1035

Query: 957  RQTCYDIRLPLESNLEPFES-NHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEE----LDQ 1011
             Q C      +    E      H+N SF    G   E+K CG+  ++  + +     L+ 
Sbjct: 1036 DQVCVWWYPKIAIRKEHHHKYTHINASFR---GHWTEIKKCGIDLIFAGDQQNHMPMLEH 1092

Query: 1012 TTN--------QPSRFTVYNLNEFDQHF 1031
              N        Q +   V+  N+ D+H+
Sbjct: 1093 PQNSGDNGSALQDTDGNVHGANQDDEHY 1120


>gi|332330340|gb|AEE43926.1| TIR-NBS-LRR resistance protein muRdr1B [Rosa multiflora]
          Length = 1157

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 309/711 (43%), Positives = 430/711 (60%), Gaps = 54/711 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M ++ E++  L+D  +SDVR IGI GMGGLGKTT+AR+VY+ ISH+FE   FL NVRE+S
Sbjct: 199 MHTKLEEIDVLLDIEASDVRFIGIWGMGGLGKTTLARLVYEKISHQFEVCVFLTNVREVS 258

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +  GLV LQ+Q+LS +LK  +  +WNV+ GI M+      K VLLV+DDV   +QL+ LA
Sbjct: 259 ATHGLVYLQKQILSHILKEENAQVWNVYSGITMIKRCFCNKAVLLVLDDVDQSEQLEHLA 318

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G ++WFG  SRII T+R++ +L THGV++ Y+  GLN  EALQLF+ KAF+  +P ++  
Sbjct: 319 GEKDWFGLRSRIIFTTRNQRVLVTHGVEKPYELKGLNNAEALQLFSWKAFRKCEPEEDYA 378

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +L    + +AGGLPLAL+ LGSFL  RS D W S L +L   P   + D+L++S+DGL E
Sbjct: 379 ELCKSFVMHAGGLPLALKTLGSFLYKRSPDAWNSALAKLRNTPDKTVFDMLKVSYDGLDE 438

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQ 299
           +EKKIFLDIACF       ++   L        I I VL+E+ L+T+  NN + MHDL++
Sbjct: 439 MEKKIFLDIACFSSQCQAKFIIELLYSYDVCIGIAIEVLVERSLVTISSNNEIGMHDLIR 498

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G +IV++QSPEE G  SRLW   ++ HV T++TGTE +EGI L  +  E   +   + 
Sbjct: 499 EMGCEIVRQQSPEEPGGCSRLWLRNDIFHVFTKNTGTEAIEGIFLHLHKLEGADW---NP 555

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           +AFSKM NL+LL I NL+L  G + L + LR+L W  YPLK LP   Q D+  E+   +S
Sbjct: 556 EAFSKMCNLKLLYIHNLRLSLGPKSLPDALRILKWSWYPLKSLPPGFQPDELTELSFVHS 615

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
            I  LW GIK+L  LK ++LS+S NLIR PDFTG PNLEKL+LEGCT L +IHPS+ L  
Sbjct: 616 NIDHLWNGIKYLGNLKSIVLSYSINLIRTPDFTGIPNLEKLVLEGCTNLVKIHPSIALLK 675

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
           +L I N ++C S+ TLP ++ M+ LE                  T DVSG  K +  PE 
Sbjct: 676 RLKIWNFRNCKSIKTLPSEVNMEFLE------------------TFDVSGCSKLKMIPEF 717

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLS-GLVLLNLKN-----------------CRSLE 581
           V   + LS+L L GTA+  LP SIE LS  LV L+L                     SL 
Sbjct: 718 VGQTKRLSKLCLGGTAVEKLPSSIEHLSESLVGLDLSGIVIREQPYSLFLKQNVIASSLG 777

Query: 582 ILP-----------VTVSNLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKE 629
           + P            ++ +   L+ L L+ C+  + + P  + S+  L  L L G +   
Sbjct: 778 LFPRKSHHPLIPVLASLKHFSSLKELNLNDCNLCEGEIPNDIGSLSSLECLELGGNNFVS 837

Query: 630 VPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
           +P+SI LL +L  +N+ +CK L +LP   ++  SL+   ++ C  L+  PE
Sbjct: 838 LPASIHLLCRLGSINVENCKRLQQLPELPVS-GSLRVTTVN-CTSLQVFPE 886



 Score =  180 bits (456), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 169/550 (30%), Positives = 256/550 (46%), Gaps = 111/550 (20%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
            L+S+ LS    L + P+    + +L +L L+G T++ ++  SI LL +L++ N  +CK++
Sbjct: 630  LKSIVLSYSINLIRTPDFT-GIPNLEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNCKSI 688

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYS-- 706
              LPS +  ++ L+T ++SGC KL+ +PE +GQ + L +L + GTAV   P S    S  
Sbjct: 689  KTLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQTKRLSKLCLGGTAVEKLPSSIEHLSES 747

Query: 707  ------------------YIPINLMRKSVAL-----------KLPSLSGLCSLRKLNLTD 737
                              ++  N++  S+ L            L SL    SL++LNL D
Sbjct: 748  LVGLDLSGIVIREQPYSLFLKQNVIASSLGLFPRKSHHPLIPVLASLKHFSSLKELNLND 807

Query: 738  CNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP- 796
            CNL EG +P+DIG+L SL+ L L  N+FVSLP SI  L +L +I +E+CKRLQ LP+LP 
Sbjct: 808  CNLCEGEIPNDIGSLSSLECLELGGNNFVSLPASIHLLCRLGSINVENCKRLQQLPELPV 867

Query: 797  -PNIRQVRVNGCASLVTLLD-ALKLCKSDSTMIACLDSLKLLGNKSLAF---SMLREYLE 851
              ++R   VN C SL    +    LC+  +  +  ++ L  +GN+  +F   S++   LE
Sbjct: 868  SGSLRVTTVN-CTSLQVFPELPPDLCRLSAFSLNSVNCLSTIGNQDASFFLYSVINRLLE 926

Query: 852  AVSNT---------------------------RQHLSV-----VVPGSEIPEWFMYQNEG 879
                T                             HLS      ++PGSEIPEWF  Q+ G
Sbjct: 927  VTYVTYVRSLSLSLSLSLSLSLSLSLSLSRSLETHLSFEFLNFLIPGSEIPEWFNNQSAG 986

Query: 880  SSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRG---------NNCFGS--YPTHQLNCH 928
             S+T   P +  N  K +G+A+C +     N            + C  S  +  + +N  
Sbjct: 987  DSVTEKLPWDACN-SKWIGFAVCALIVPQDNPSAVPEDPDLDPDTCLISCNWSNYGINGV 1045

Query: 929  IGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLG 988
            +G G+          Q  SDHLWLL L          P     +P     VN  F+    
Sbjct: 1046 VGRGLC-------VRQFDSDHLWLLVLPS--------PFR---KPKNCREVNFVFQTARA 1087

Query: 989  QG----LEVKMCGLHPVYMDEVEELDQTTNQPSRFTVYNLNEFDQHFVGSKMIVATT-SK 1043
             G    ++VK CG+  +Y  + EEL    NQ    +V    E      G+ +  AT+ S 
Sbjct: 1088 VGNNRCMKVKKCGVRALYEQDTEELISKMNQSKSSSVSLYEEAMDEQEGAMVKAATSGSG 1147

Query: 1044 RSLTEYFGAE 1053
             S  EY+ AE
Sbjct: 1148 GSGNEYYPAE 1157


>gi|357509573|ref|XP_003625075.1| TMV resistance protein N [Medicago truncatula]
 gi|355500090|gb|AES81293.1| TMV resistance protein N [Medicago truncatula]
          Length = 1579

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 356/905 (39%), Positives = 507/905 (56%), Gaps = 139/905 (15%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +DSR   +  L+ + S ++R  GI GMGG+GKTT+A+ +Y  I ++F+ S FL+NVRE+S
Sbjct: 242  IDSRINNMCSLLRTDSEEIRFEGIWGMGGIGKTTLAKHIYKKIHNQFDVSCFLENVRELS 301

Query: 61   S-KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            S + GL+ LQR+LLS L K++   I ++  G +++ + L  KKVLLV+DD+    QL++L
Sbjct: 302  SERDGLLCLQRKLLSHL-KISSMRIESLDQGKEIIRNLLFNKKVLLVLDDLSSDIQLENL 360

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            AG ++WFG GSR+IIT+RD+HLL +  V E+Y    LN  E+LQLF+ KAF++ +P +  
Sbjct: 361  AG-KQWFGPGSRVIITTRDKHLLVSLSVCEIYDAQILNSHESLQLFSQKAFRSGKPEEGF 419

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            V+LS + ++ AGG+PLAL+VLGSFL GR    W   L+ L+ +  ++I   L+IS+DGL+
Sbjct: 420  VELSKQAVQCAGGIPLALKVLGSFLCGRKASVWEDALKMLQQDLQNDIYKTLRISYDGLR 479

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
            ++EK IFLDIACFFKG+ +D+VT  LE CG +P+IGI VLIEK LIT     L MHDLLQ
Sbjct: 480  DMEKAIFLDIACFFKGSRKDHVTQILENCGLNPLIGIDVLIEKSLITYDGWHLGMHDLLQ 539

Query: 300  ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA-S 358
            E+G+ IV  +S  + GK+SRLW  +++  VL  + GTE  + +VL+     +E +  + +
Sbjct: 540  EMGRNIVLHESLNDAGKQSRLWSLKDIDQVLRNNKGTESTQAVVLN----LSEAFEASWN 595

Query: 359  AKAFSKMTNLRLLKICN-LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
             +AF+KM NLRLL I N LQL +GL+ L + L++L W+  PL+ LP   Q D+ +++ MC
Sbjct: 596  PEAFAKMGNLRLLMILNKLQLQHGLKCLPSGLKVLVWKECPLESLPIGDQSDELVDLDMC 655

Query: 418  YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
            +S+I  LWKG K L  LK + L +S+ L + PDFTG PNLEKL LEGC  L E+H SL L
Sbjct: 656  HSKIKHLWKGTKLLGNLKTINLKNSKYLHQTPDFTGIPNLEKLDLEGCINLVEVHASLGL 715

Query: 478  HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
              K+  + ++DC +L +LPGK+ M SL++L L                  +G    R+ P
Sbjct: 716  LKKISYVTLEDCKNLKSLPGKLEMNSLKRLIL------------------TGCTSVRKLP 757

Query: 538  EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
            +  E M +LS L L+   +  LP +I  L+GL  L L++C+++  LP T S LK L+ L 
Sbjct: 758  DFGESMTNLSTLALDEIPLAELPPTIGYLTGLNSLLLRDCKNIYSLPDTFSKLKSLKRLN 817

Query: 598  LSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVR---- 653
            LSGCSK  K P+ +   + L  L +  T+I+EVPSSI  L  L  L    CK L R    
Sbjct: 818  LSGCSKFSKLPDNLHENEALECLNVSNTAIREVPSSIVHLKNLISLLFHGCKGLARNSES 877

Query: 654  --LP------------------SSIIALKSLKTLNLSGC-FKLENVPETLGQIESLEELD 692
              LP                   S   L SLK L+LS C    E++P+ LG + SL  LD
Sbjct: 878  SLLPLGRIFGFGTHPTPKKLILPSFSGLSSLKKLDLSYCNLYDESIPDDLGCLSSLVTLD 937

Query: 693  ISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNL 752
            ISG                     V L+   +S L  L +L L+ C              
Sbjct: 938  ISGNNF------------------VNLRDGCISKLLKLERLVLSSC-------------- 965

Query: 753  CSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVT 812
                                              + LQSLP LPPN+  V  + C+SL  
Sbjct: 966  ----------------------------------QNLQSLPNLPPNVHFVNTSDCSSLKP 991

Query: 813  LLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEW 872
            L D  ++    +               S AF  L++     +N  + L +V PG+EIP  
Sbjct: 992  LSDPQEIWGHLA---------------SFAFDKLQD-----ANQIKTL-LVGPGNEIPST 1030

Query: 873  FMYQN 877
            F YQN
Sbjct: 1031 FFYQN 1035


>gi|105922557|gb|ABF81423.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1359

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 290/590 (49%), Positives = 390/590 (66%), Gaps = 23/590 (3%)

Query: 32   KTTIARVVYDLISHEFEASGFLDNVREI-SSKGGLVSLQRQLLSQLLKLADNSIWNVFDG 90
            KTT+ARVVYD    +F+ S FL NVRE+   K G   LQ QLLS++L +   +I +   G
Sbjct: 551  KTTVARVVYDRFHWQFKGSCFLANVREVFVEKDGPRRLQEQLLSEIL-MERANICDSSRG 609

Query: 91   IDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEV 150
            I+M+  RLQ KK+ +V+DDV D KQL+SLA   +WFG GSRIIIT RD  +L  +GV  +
Sbjct: 610  IEMIKRRLQHKKIRVVLDDVDDHKQLESLAAESKWFGPGSRIIITGRDRQVLTRNGVARI 669

Query: 151  YKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVD 210
            Y+   LN D+AL LF+ KAFK  QP ++ V+LS +++ YA GLPLALEV+GSF+ GRS+ 
Sbjct: 670  YEAEKLNDDDALMLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFMHGRSIL 729

Query: 211  EWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGF 270
            EW S + RL   P  EI+D+L+ISFDGL ELEKKIFLDIACF KG  +D +   L+ CGF
Sbjct: 730  EWGSAINRLNEIPDREIIDVLRISFDGLHELEKKIFLDIACFLKGFKKDRIIRILDSCGF 789

Query: 271  HPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVL 330
            H  IG +VLIEK LI+V  + +WMH+LLQ +G++IV+ +SPEE G+RSRLW   +VC  L
Sbjct: 790  HAHIGTQVLIEKSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYADVCLAL 849

Query: 331  TESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLR 390
             ++TG E +E I LD    +   +   + ++FSKM+ LRLLKI N+QL  G E +SN+L+
Sbjct: 850  MDNTGKEKIEAIFLDMPGIKESQW---NMESFSKMSRLRLLKINNVQLSEGPEDISNKLQ 906

Query: 391  LLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD 450
             L W  YPLK LP  LQ+D+ +E++M  S I +LW G K    LK++ LS+S NLI+ PD
Sbjct: 907  FLEWHSYPLKSLPVGLQVDQLVELHMANSSIEQLWYGYKSAVNLKIINLSNSLNLIKTPD 966

Query: 451  FTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK 510
            FTG PNL+ LILEGCT L E+HPSL  H KL  +N+ +C S+  LP  + M SL+     
Sbjct: 967  FTGIPNLKNLILEGCTSLSEVHPSLAHHKKLQYMNLVNCKSIRILPNNLEMGSLK----- 1021

Query: 511  SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLV 570
                       +  LD  G  K  +FP+IV +M  L+ L L+GT I  L  S+  L GL 
Sbjct: 1022 -----------VCILD--GCSKLEKFPDIVGNMNCLTVLRLDGTGITKLSSSMHHLIGLG 1068

Query: 571  LLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL 620
            LL++ NC++LE +P ++  LK L+ L LSGCS+LK  PE +  ++ L EL
Sbjct: 1069 LLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGKVESLEEL 1118



 Score =  119 bits (298), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/196 (41%), Positives = 120/196 (61%), Gaps = 12/196 (6%)

Query: 522  LSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSL 580
            L  +++S  L   + P+    + +L  L LEG T++  +  S+     L  +NL NC+S+
Sbjct: 950  LKIINLSNSLNLIKTPDFT-GIPNLKNLILEGCTSLSEVHPSLAHHKKLQYMNLVNCKSI 1008

Query: 581  EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
             ILP  +  +  L+   L GCSKL+KFP+IV +M  L+ L LDGT I ++ SS+  L  L
Sbjct: 1009 RILPNNLE-MGSLKVCILDGCSKLEKFPDIVGNMNCLTVLRLDGTGITKLSSSMHHLIGL 1067

Query: 641  ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS------ 694
             LL++++CKNL  +PSSI  LKSLK L+LSGC +L+ +PE LG++ESLEELD        
Sbjct: 1068 GLLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGKVESLEELDCRSNPRPG 1127

Query: 695  -GTAVPHST--SWYSY 707
             G AVP +    W+++
Sbjct: 1128 FGIAVPGNEIPGWFNH 1143



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 189/427 (44%), Gaps = 76/427 (17%)

Query: 461  ILEGCTRLYEIHPSLLLHNKLIILNMKDC--TSLITLPGKILMK--SLEKLNLKSLPTTI 516
            IL+ C     I   +L+   LI ++       +L+ + GK +++  S E+   +S   T 
Sbjct: 783  ILDSCGFHAHIGTQVLIEKSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTY 842

Query: 517  SGLKCLSTLDVSGDLK----FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLL 572
            + + CL+ +D +G  K    F + P I E     S+ ++E         S   +S L LL
Sbjct: 843  ADV-CLALMDNTGKEKIEAIFLDMPGIKE-----SQWNME---------SFSKMSRLRLL 887

Query: 573  NLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPS 632
             + N + L   P  +SN   L+ L+      LK  P +   +  L EL +  +SI+++  
Sbjct: 888  KINNVQ-LSEGPEDISNK--LQFLEWHS-YPLKSLP-VGLQVDQLVELHMANSSIEQLWY 942

Query: 633  SIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD 692
              +    L+++NLS+  NL++ P     + +LK L L GC  L  V  +L   + L+ ++
Sbjct: 943  GYKSAVNLKIINLSNSLNLIKTPD-FTGIPNLKNLILEGCTSLSEVHPSLAHHKKLQYMN 1001

Query: 693  ISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNL 752
            +                     KS+ + LP+   + SL+   L  C+ +E   P  +GN+
Sbjct: 1002 LVNC------------------KSIRI-LPNNLEMGSLKVCILDGCSKLE-KFPDIVGNM 1041

Query: 753  CSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ---LPPNIRQVRVNGCAS 809
              L  L L       L +S+ HL  L  + + +CK L+S+P       +++++ ++GC+ 
Sbjct: 1042 NCLTVLRLDGTGITKLSSSMHHLIGLGLLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSE 1101

Query: 810  LVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEI 869
            L  + +  KL K +S                       E L+  SN R    + VPG+EI
Sbjct: 1102 LKYIPE--KLGKVESL----------------------EELDCRSNPRPGFGIAVPGNEI 1137

Query: 870  PEWFMYQ 876
            P WF +Q
Sbjct: 1138 PGWFNHQ 1144


>gi|87241451|gb|ABD33309.1| Ribonuclease H [Medicago truncatula]
          Length = 1378

 Score =  524 bits (1350), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 356/905 (39%), Positives = 507/905 (56%), Gaps = 139/905 (15%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DSR   +  L+ + S ++R  GI GMGG+GKTT+A+ +Y  I ++F+ S FL+NVRE+S
Sbjct: 59  IDSRINNMCSLLRTDSEEIRFEGIWGMGGIGKTTLAKHIYKKIHNQFDVSCFLENVRELS 118

Query: 61  S-KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S + GL+ LQR+LLS L K++   I ++  G +++ + L  KKVLLV+DD+    QL++L
Sbjct: 119 SERDGLLCLQRKLLSHL-KISSMRIESLDQGKEIIRNLLFNKKVLLVLDDLSSDIQLENL 177

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG ++WFG GSR+IIT+RD+HLL +  V E+Y    LN  E+LQLF+ KAF++ +P +  
Sbjct: 178 AG-KQWFGPGSRVIITTRDKHLLVSLSVCEIYDAQILNSHESLQLFSQKAFRSGKPEEGF 236

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V+LS + ++ AGG+PLAL+VLGSFL GR    W   L+ L+ +  ++I   L+IS+DGL+
Sbjct: 237 VELSKQAVQCAGGIPLALKVLGSFLCGRKASVWEDALKMLQQDLQNDIYKTLRISYDGLR 296

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           ++EK IFLDIACFFKG+ +D+VT  LE CG +P+IGI VLIEK LIT     L MHDLLQ
Sbjct: 297 DMEKAIFLDIACFFKGSRKDHVTQILENCGLNPLIGIDVLIEKSLITYDGWHLGMHDLLQ 356

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA-S 358
           E+G+ IV  +S  + GK+SRLW  +++  VL  + GTE  + +VL+     +E +  + +
Sbjct: 357 EMGRNIVLHESLNDAGKQSRLWSLKDIDQVLRNNKGTESTQAVVLN----LSEAFEASWN 412

Query: 359 AKAFSKMTNLRLLKICN-LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
            +AF+KM NLRLL I N LQL +GL+ L + L++L W+  PL+ LP   Q D+ +++ MC
Sbjct: 413 PEAFAKMGNLRLLMILNKLQLQHGLKCLPSGLKVLVWKECPLESLPIGDQSDELVDLDMC 472

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
           +S+I  LWKG K L  LK + L +S+ L + PDFTG PNLEKL LEGC  L E+H SL L
Sbjct: 473 HSKIKHLWKGTKLLGNLKTINLKNSKYLHQTPDFTGIPNLEKLDLEGCINLVEVHASLGL 532

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
             K+  + ++DC +L +LPGK+ M SL++L L                  +G    R+ P
Sbjct: 533 LKKISYVTLEDCKNLKSLPGKLEMNSLKRLIL------------------TGCTSVRKLP 574

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
           +  E M +LS L L+   +  LP +I  L+GL  L L++C+++  LP T S LK L+ L 
Sbjct: 575 DFGESMTNLSTLALDEIPLAELPPTIGYLTGLNSLLLRDCKNIYSLPDTFSKLKSLKRLN 634

Query: 598 LSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVR---- 653
           LSGCSK  K P+ +   + L  L +  T+I+EVPSSI  L  L  L    CK L R    
Sbjct: 635 LSGCSKFSKLPDNLHENEALECLNVSNTAIREVPSSIVHLKNLISLLFHGCKGLARNSES 694

Query: 654 --LP------------------SSIIALKSLKTLNLSGC-FKLENVPETLGQIESLEELD 692
             LP                   S   L SLK L+LS C    E++P+ LG + SL  LD
Sbjct: 695 SLLPLGRIFGFGTHPTPKKLILPSFSGLSSLKKLDLSYCNLYDESIPDDLGCLSSLVTLD 754

Query: 693 ISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNL 752
           ISG                     V L+   +S L  L +L L+ C              
Sbjct: 755 ISGNNF------------------VNLRDGCISKLLKLERLVLSSC-------------- 782

Query: 753 CSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVT 812
                                             + LQSLP LPPN+  V  + C+SL  
Sbjct: 783 ----------------------------------QNLQSLPNLPPNVHFVNTSDCSSLKP 808

Query: 813 LLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEW 872
           L D  ++    +               S AF  L++     +N  + L +V PG+EIP  
Sbjct: 809 LSDPQEIWGHLA---------------SFAFDKLQD-----ANQIKTL-LVGPGNEIPST 847

Query: 873 FMYQN 877
           F YQN
Sbjct: 848 FFYQN 852


>gi|147862827|emb|CAN78931.1| hypothetical protein VITISV_024045 [Vitis vinifera]
          Length = 1454

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 336/859 (39%), Positives = 490/859 (57%), Gaps = 90/859 (10%)

Query: 17   SDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQL 76
            +DVR++GI G GG+GKTTIA++VY+ I  +F  + FL +V+E S  G  + LQ+QLL  +
Sbjct: 211  NDVRVVGIYGTGGIGKTTIAKIVYNEIQCQFSGASFLQDVKERSKNGCQLELQKQLLRGI 270

Query: 77   LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITS 136
            L   D +  ++ +GI+++  RL  KK+L+VIDDV  +KQL+SLA + +WFG GSRIIIT+
Sbjct: 271  LG-KDIAFSDINEGINIIQGRLGSKKILIVIDDVDHLKQLESLAKSPKWFGPGSRIIITT 329

Query: 137  RDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLA 196
            RD+HLL  +GV+  Y+   L+Y EALQLF+  AFK   P ++ V  S  ++ YA GLPLA
Sbjct: 330  RDQHLLGEYGVNIPYRVTELHYKEALQLFSRYAFKQNVPKEDYVDFSNCMVDYAQGLPLA 389

Query: 197  LEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGN 256
            L+VLGS L G ++DEWRS L+RL+  P  EI D+L+ISFDGL  LEK +FLDIACFFK  
Sbjct: 390  LKVLGSSLHGMTIDEWRSALDRLKKNPVKEINDVLRISFDGLDNLEKDVFLDIACFFKKE 449

Query: 257  DRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGK 316
             +D+V+  L+GC      GI +L +KCLIT+ +N + MHDL++++G  IV+ + P +  K
Sbjct: 450  CKDFVSRILDGCNLFATHGITILHDKCLITISDNIIQMHDLIRQMGWAIVRDEYPGDPSK 509

Query: 317  RSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI-CN 375
             SRLW  +++    +   G E ++ I LD    +   +   + + F+KM  LRLLK+ CN
Sbjct: 510  WSRLWDVDDIYDAFSRQEGMENIQTISLDMSTSKEMQF---TTEVFAKMNKLRLLKVYCN 566

Query: 376  -----------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGEL 424
                       + LP  +E+  ++LR L W+G  L+ LPS    +  +EI +  S I +L
Sbjct: 567  DHDGLTREEYKVFLPKDIEF-PHKLRYLHWQGCTLRSLPSKFYGENLVEINLKSSNIKQL 625

Query: 425  WKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIIL 484
            WKG K L KLKV+ LS S+ L++MP F+  PNLE+L LEGC  L E+H S+    +L  L
Sbjct: 626  WKGDKFLGKLKVIDLSDSKQLVKMPKFSSMPNLERLNLEGCISLRELHLSIGDLKRLTYL 685

Query: 485  NMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHME 544
            N+  C  L + P  +  +SLE L                 LD   +LK  +FP+I  +M 
Sbjct: 686  NLGGCEQLQSFPPGMKFESLEVL----------------YLDRCQNLK--KFPKIHGNMG 727

Query: 545  HLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKL 604
            HL EL+L  + I+ LP SI  L+ L +LNL NC +LE  P    N+K LR L L GCSK 
Sbjct: 728  HLKELYLNKSEIKELPSSIVYLASLEVLNLSNCSNLEKFPEIHGNMKFLRELHLEGCSKF 787

Query: 605  KKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVR----------- 653
            +KF +    M+ L  L L  + IKE+PSSI  L  LE+L+LS C    +           
Sbjct: 788  EKFSDTFTYMEHLRGLHLGESGIKELPSSIGYLESLEILDLSYCSKFEKFPEIKGNMKCL 847

Query: 654  ------------LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV--- 698
                        LP+S+ +L SL+ L+L  C K E   +    +  L EL +  + +   
Sbjct: 848  KELYLDNTAIKELPNSMGSLTSLEILSLKECLKFEKFSDIFTNMGLLRELYLRESGIKEL 907

Query: 699  PHSTSWYSYIPI-NLMRKSVALKLPSLSG-LCSLRKLNLTDCNLMEGALPSDIGNLCSLK 756
            P+S  +   + I NL   S   K P + G L  L++L L +  + E  LP+ IG L +L+
Sbjct: 908  PNSIGYLESLEILNLSYCSNFQKFPEIQGNLKCLKELCLENTAIKE--LPNGIGCLQALE 965

Query: 757  E----------------------LYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ 794
                                   L+L +     LP SI HL++L  ++LE+C+ L+SLP 
Sbjct: 966  SLALSGCSNFERFPEIQMGKLWALFLDETPIKELPCSIGHLTRLKWLDLENCRNLRSLPN 1025

Query: 795  LP---PNIRQVRVNGCASL 810
                  ++ ++ +NGC++L
Sbjct: 1026 SICGLKSLERLSLNGCSNL 1044



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 207/706 (29%), Positives = 302/706 (42%), Gaps = 115/706 (16%)

Query: 359  AKAFSKMTNLRLLKICN---LQLPNGLEYLSN-RLRLLGWRGYPLKFLPSNLQMDKTIEI 414
            +  F+ M +LR L +      +LP+ + YL +  +  L +     KF      M    E+
Sbjct: 791  SDTFTYMEHLRGLHLGESGIKELPSSIGYLESLEILDLSYCSKFEKFPEIKGNMKCLKEL 850

Query: 415  YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPNLEKLILEGCTRLYEIHP 473
            Y+  + I EL   +  L  L+++ L       +  D FT    L +L L   + + E+  
Sbjct: 851  YLDNTAIKELPNSMGSLTSLEILSLKECLKFEKFSDIFTNMGLLRELYLRE-SGIKELPN 909

Query: 474  SLLLHNKLIILNMKDCTSLITLPG-----KILMK-SLEKLNLKSLPTTISGLKCLSTLDV 527
            S+     L ILN+  C++    P      K L +  LE   +K LP  I  L+ L +L +
Sbjct: 910  SIGYLESLEILNLSYCSNFQKFPEIQGNLKCLKELCLENTAIKELPNGIGCLQALESLAL 969

Query: 528  SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
            SG   F  FPEI   M  L  L L+ T I+ LP SI  L+ L  L+L+NCR+L  LP ++
Sbjct: 970  SGCSNFERFPEI--QMGKLWALFLDETPIKELPCSIGHLTRLKWLDLENCRNLRSLPNSI 1027

Query: 588  SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
              LK L  L L+GCS L+ F EI   M+ L  LFL  T I E+PS I  L  LE L L +
Sbjct: 1028 CGLKSLERLSLNGCSNLEAFSEITEDMERLEHLFLRETGITELPSLIGHLRGLESLELIN 1087

Query: 648  CKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSY 707
            C+NLV LP+SI +L  L TL +  C KL N+P+ L  ++                     
Sbjct: 1088 CENLVALPNSIGSLTCLTTLRVRNCTKLRNLPDNLRSLQ--------------------- 1126

Query: 708  IPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS 767
                                C L  L+L  CNLMEG +PSD+  L  L  L +S+N    
Sbjct: 1127 --------------------CCLLWLDLGGCNLMEGEIPSDLWCLSLLVSLDVSENHIRC 1166

Query: 768  LPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMI 827
            +P  IT LSKL  + +  C  L+ + ++P ++  +  +GC SL T            T  
Sbjct: 1167 IPAGITQLSKLKALFMNHCPMLEEIGEVPSSLTVMEAHGCPSLET-----------ETFS 1215

Query: 828  ACLDSLKLLGNKSLAFSMLREYLEA-----VSNTRQHLSVVVPGSE-IPEWFMYQNEGSS 881
            +    L     K     +  E+ E      +    Q  S+++PGS  IPEW  +Q  G  
Sbjct: 1216 S---LLWSSLLKRFKSPIQPEFFEPNFFLDLDFYPQRFSILLPGSNGIPEWVSHQRMGCE 1272

Query: 882  ITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHG-----IYGI 936
            +++  P N Y     +G+ +      L +       GS P  +L   I HG     +  I
Sbjct: 1273 VSIELPMNWYEDDNFLGFVLFFHHVPLDDDECETTEGSIPHCELT--ISHGDQSERLEEI 1330

Query: 937  GFRDKFGQAGSDHLWLLYLSRQTCYDI--------------RLPLESNLEPFESNHVNVS 982
             F  K     + HL    LS + CYD               ++ + S       N+    
Sbjct: 1331 SFYFKCKTYLASHL----LSGKHCYDSDSTPDPAIWVTYFPQIDIPSEYRSRRRNNFKXH 1386

Query: 983  FEPWLGQG---------LEVKMCGLHPVYMDEVEELDQTT-NQPSR 1018
            F   +G G          +VK CG+H +Y       DQ    QPSR
Sbjct: 1387 FHTPIGVGSFKCGDNACFKVKSCGIHLLYAQ-----DQIHWPQPSR 1427


>gi|255547494|ref|XP_002514804.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223545855|gb|EEF47358.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1082

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 325/757 (42%), Positives = 456/757 (60%), Gaps = 72/757 (9%)

Query: 1   MDSRC-EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           M+SR  E +++L    S DVR +GICGMGG+GKTTIAR VY  +S EFE S FL NVRE+
Sbjct: 192 MNSRLNEMMKYLGKRESDDVRFVGICGMGGIGKTTIARAVYAELSSEFEGSCFLANVREV 251

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
             K  L SLQ QLLS+ L     ++W++  G + + +RL  KKVL+++DDV  ++QL+SL
Sbjct: 252 EEKNSL-SLQEQLLSETLMERKITVWDIHAGRNEIKNRLSHKKVLIILDDVNHLEQLKSL 310

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG+GSRIIIT+RDEHLL  HGV+ +Y+  GLN+DEAL+LF++KAFK   P  + 
Sbjct: 311 AGMSDWFGNGSRIIITTRDEHLLLCHGVERIYRVGGLNHDEALRLFSLKAFKNDYPADDY 370

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V+LS   + YA GLPLAL+VLGS L GRS++EW+S L+RL+  P   ILD L ISF+GLQ
Sbjct: 371 VELSNHFVNYANGLPLALDVLGSCLYGRSINEWQSALDRLKEIPNKRILDKLYISFEGLQ 430

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           E+EKK+FLDIACFFKG D+ YV   LE CGF+  IGIRVL+ K LIT+ N+ +WMHDLLQ
Sbjct: 431 EIEKKVFLDIACFFKGEDKHYVVKVLESCGFYAEIGIRVLLSKSLITITNDRIWMHDLLQ 490

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G+ IV+R   EE G+RSRLW  ++V HVL+  TGTE VEGIVLD+   E++     SA
Sbjct: 491 EMGRDIVRRSCYEEPGRRSRLWLYKDVSHVLSNDTGTEQVEGIVLDSCEQEDKHL---SA 547

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           KAF KM  LRLLK+ N++L   LEYLSN+LR L W  YP + LPS  Q DK +E+++  S
Sbjct: 548 KAFMKMRKLRLLKLRNVRLSGSLEYLSNKLRYLEWEEYPFRSLPSTFQPDKLVELHLPSS 607

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGA----PNLEKLILEG-------CTRL 468
            I +LWKG+K L  LKV+ LS+S NLI+  DF         LEKL + G        T+ 
Sbjct: 608 NIQQLWKGMKPLKMLKVIDLSYSVNLIKTMDFRDGLWDMKCLEKLDIGGIAGKQLASTKA 667

Query: 469 YE-IHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK-------SLPTTISGLK 520
           ++ + PS LL  K   LN+ D      LP   ++ +L  LNL        +LP  +S   
Sbjct: 668 WDFLLPSWLLPRK--TLNLMD-----FLPSISVLCTLRSLNLSYCNLAEGTLPNDLSCFP 720

Query: 521 CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRS 579
            L +L++SG+  F   P  +  +  L +L       ++ LP    L SG++ L+   C S
Sbjct: 721 SLQSLNLSGN-DFVSVPTSISKLSKLEDLRFAHCKKLQSLP---NLPSGILYLSTDGCSS 776

Query: 580 LEI-LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKE--------- 629
           L   LP  ++    L +L  + C +L+  P++  S+ ++S   ++G + +E         
Sbjct: 777 LGTSLPKIITKHCQLENLCFANCERLQSLPDLSSSIVNIS---MEGLTAQENFSNPLEKD 833

Query: 630 --VPSSIELLTKLELLNLS--DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI 685
               S++  L +++L+ +   +C    RL S +  L             L +  + L   
Sbjct: 834 DPKASALTFLNRMQLVEIQGKNCSAFARLTSYLHYL-------------LRHSSQGLFNP 880

Query: 686 ESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
            S   + + G+ +P    W++Y  I     S+ L+LP
Sbjct: 881 SSHVSMCLGGSEIPE---WFNYQGIG---SSIELQLP 911



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 110/324 (33%), Positives = 159/324 (49%), Gaps = 67/324 (20%)

Query: 650 NLVRLPSSIIALKSLKTLNLS---GCFKLENVPETLGQIESLEELDISGTA---VPHSTS 703
           N+ +L   +  LK LK ++LS      K  +  + L  ++ LE+LDI G A   +  + +
Sbjct: 608 NIQQLWKGMKPLKMLKVIDLSYSVNLIKTMDFRDGLWDMKCLEKLDIGGIAGKQLASTKA 667

Query: 704 WYSYIPINLM-RKSVALK--LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
           W   +P  L+ RK++ L   LPS+S LC+LR LNL+ CNL EG LP+D+    SL+ L L
Sbjct: 668 WDFLLPSWLLPRKTLNLMDFLPSISVLCTLRSLNLSYCNLAEGTLPNDLSCFPSLQSLNL 727

Query: 761 SKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDAL--K 818
           S N FVS+PTSI+ LSKL ++    CK+LQSLP LP  I  +  +GC+SL T L  +  K
Sbjct: 728 SGNDFVSVPTSISKLSKLEDLRFAHCKKLQSLPNLPSGILYLSTDGCSSLGTSLPKIITK 787

Query: 819 LCKSDSTMIACLDSLKLL------------------------------------------ 836
            C+ ++   A  + L+ L                                          
Sbjct: 788 HCQLENLCFANCERLQSLPDLSSSIVNISMEGLTAQENFSNPLEKDDPKASALTFLNRMQ 847

Query: 837 -----GNKSLAFSMLREYL--------EAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSIT 883
                G    AF+ L  YL        + + N   H+S+ + GSEIPEWF YQ  GSSI 
Sbjct: 848 LVEIQGKNCSAFARLTSYLHYLLRHSSQGLFNPSSHVSMCLGGSEIPEWFNYQGIGSSIE 907

Query: 884 VTRPSNLYNKKKLVGYAICCVFHV 907
           +  P + +   + +G+AIC  F V
Sbjct: 908 LQLPQHWFT-DRWMGFAICVDFEV 930


>gi|356522594|ref|XP_003529931.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1068

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 345/799 (43%), Positives = 464/799 (58%), Gaps = 97/799 (12%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DSR +++  LM     DVR+IGI G GG+GKTTIAR VY+ I  +F+ S FL+N+RE+S
Sbjct: 189 IDSRMKEMYSLMGIRLKDVRLIGIWGRGGIGKTTIARKVYEAIKGDFDVSCFLENIREVS 248

Query: 61  SKGGLVSLQRQL------LSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
              GLV +Q++L          L++ D    N+ DG  ++ + L  KKVLLV+DDV ++ 
Sbjct: 249 KTNGLVHIQKELSNLGVIFRDQLRIVDFD--NLHDGKMIIANSLSNKKVLLVLDDVSELS 306

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL++LAG +EWFG GSR+IIT+RD+HLLKTHGV    K   L  +EALQL  +KAFK  Q
Sbjct: 307 QLENLAGKQEWFGPGSRVIITTRDKHLLKTHGVHLTCKARALAQNEALQLICLKAFKRDQ 366

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           P +  + L   +I  A GLPLALEVLGS L GR+V+ W S LE++   P S+I D L+IS
Sbjct: 367 PKKGYLNLCKEMIECARGLPLALEVLGSHLHGRNVEVWHSALEQIRSFPHSKIQDKLKIS 426

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH--NNTL 292
           +D LQ   +K+FLDIACFFKG D D V N L  CG +P IGI +LIE+CL+T+    N L
Sbjct: 427 YDSLQPPYQKMFLDIACFFKGMDIDEVKNILRNCGDYPEIGIDILIERCLVTLDRVKNKL 486

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYH-HEN 351
            MHDLLQE+G+ IV  +SP + GKRSRLW E+++ +VLT++ GT+ ++G+VL+    +++
Sbjct: 487 GMHDLLQEMGRNIVFEESPNDPGKRSRLWSEKDIDYVLTKNKGTDKIQGMVLNLVQPYDS 546

Query: 352 EVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           EV    +  AFSKM  LRLLK+C++QLP GL  L + L++L WRG PLK LP        
Sbjct: 547 EVLW--NTGAFSKMGQLRLLKLCDMQLPLGLNCLPSALQVLHWRGCPLKALP-------- 596

Query: 412 IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
                       LW G K L+KLK + LS S+NL + PDF  APNLE L+LEGCT L E+
Sbjct: 597 ------------LWHGTKLLEKLKCIDLSFSKNLKQSPDFDAAPNLESLVLEGCTSLTEV 644

Query: 472 HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDL 531
           HPSL+ H KL ++N++DC  L TLP  + M SL+ LNL                  SG  
Sbjct: 645 HPSLVRHKKLAMMNLEDCKRLKTLPSNMEMSSLKYLNL------------------SGCS 686

Query: 532 KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
           +F+  PE  E ME LS L L+ T I  LP S+  L GL  LNLKNC++L  LP T   LK
Sbjct: 687 EFKYLPEFGESMEQLSLLILKETPITKLPSSLGCLVGLAHLNLKNCKNLVCLPDTFHKLK 746

Query: 592 CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDC--- 648
            L+ L + GCSKL   P+ +  MK L ++ L       +P S   L  L+ +NLS C   
Sbjct: 747 SLKFLDVRGCSKLCSLPDGLEEMKCLEQICLSADD--SLPPSKLNLPSLKRINLSYCNLS 804

Query: 649 ---------------------KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
                                 N V LPS I  L  L+ L L+ C KL+ +PE      S
Sbjct: 805 KESIPDEFCHLSHLQKTDPTRNNFVTLPSCISKLTKLELLILNLCKKLQRLPEL---PSS 861

Query: 688 LEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPS 747
           +++LD S      ++ +    P +L      L  P        R+L        +G LP 
Sbjct: 862 MQQLDASNCTSLETSKFNPSKPRSLFASPAKLHFP--------REL--------KGHLPR 905

Query: 748 D-IGNLCSLKELYLSKNSF 765
           + IG   +++EL L K  F
Sbjct: 906 ELIGLFENMQELCLPKTRF 924



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 155/531 (29%), Positives = 259/531 (48%), Gaps = 61/531 (11%)

Query: 495  LPGKILMKSLEKLNLKSLP-----TTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSEL 549
            LP  + +       LK+LP       +  LKC+   D+S     ++ P+  +   +L  L
Sbjct: 578  LPSALQVLHWRGCPLKALPLWHGTKLLEKLKCI---DLSFSKNLKQSPDF-DAAPNLESL 633

Query: 550  HLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
             LEG T++  +  S+     L ++NL++C+ L+ LP  +  +  L+ L LSGCS+ K  P
Sbjct: 634  VLEGCTSLTEVHPSLVRHKKLAMMNLEDCKRLKTLPSNME-MSSLKYLNLSGCSEFKYLP 692

Query: 609  EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
            E   SM+ LS L L  T I ++PSS+  L  L  LNL +CKNLV LP +   LKSLK L+
Sbjct: 693  EFGESMEQLSLLILKETPITKLPSSLGCLVGLAHLNLKNCKNLVCLPDTFHKLKSLKFLD 752

Query: 669  LSGCFKLENVPETLGQIESLEELDISGT-AVPHSTSWYSYIPINLMRKSVALKLPSLSGL 727
            + GC KL ++P+ L +++ LE++ +S   ++P                      PS   L
Sbjct: 753  VRGCSKLCSLPDGLEEMKCLEQICLSADDSLP----------------------PSKLNL 790

Query: 728  CSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCK 787
             SL+++NL+ CNL + ++P +  +L  L++   ++N+FV+LP+ I+ L+KL  + L  CK
Sbjct: 791  PSLKRINLSYCNLSKESIPDEFCHLSHLQKTDPTRNNFVTLPSCISKLTKLELLILNLCK 850

Query: 788  RLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLR 847
            +LQ LP+LP +++Q+  + C SL T        K  S   +     KL   + L   + R
Sbjct: 851  KLQRLPELPSSMQQLDASNCTSLET--SKFNPSKPRSLFAS---PAKLHFPRELKGHLPR 905

Query: 848  EYLEAVSNTRQ------HLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAI 901
            E +    N ++         + + GSEIP WF+ +   S   +  P N     + VG+A+
Sbjct: 906  ELIGLFENMQELCLPKTRFGMFITGSEIPSWFVPRKSVSFAKIAVPHNC-PVNEWVGFAL 964

Query: 902  CCVFHVLKNSRGNNCFGSYPTHQLNCHI--GHGIYGIGFRDKFG-QAGSDHLWLLYLSRQ 958
            C +  V        C      H+++C++   +G   I  R+    +    HL+ LYLS  
Sbjct: 965  CFLL-VSYAVPPEAC-----RHEVDCYLFGPNGKKIISSRNLLPMEPCCPHLYSLYLSID 1018

Query: 959  TCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEEL 1009
               D+        E  + + V    + +  Q L +  CG   V   +V+++
Sbjct: 1019 KYRDMI------YEGGDGSEVEFVQKSYCCQSLGIVRCGCRLVCKQDVQDI 1063


>gi|255579570|ref|XP_002530627.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223529837|gb|EEF31770.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1116

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 311/665 (46%), Positives = 422/665 (63%), Gaps = 45/665 (6%)

Query: 1   MDSRCEKLRFLMDSGS-SDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           M+SR  ++   +D G  +DV  IGI GMGG+GKTTIARVVY+ ++ +FE S FL NVRE+
Sbjct: 191 MNSRLVEMSMYLDMGRLNDVLFIGISGMGGIGKTTIARVVYEELASQFEGSSFLANVREV 250

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
             K GLV LQ+QLLS++L   + +IW+   G   + +R+ +K+VLL++DDV  ++QL+ L
Sbjct: 251 KEKHGLVPLQQQLLSEILMDGNIAIWDAHCGTSEIVNRMCKKRVLLILDDVNQLEQLKLL 310

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFGSGSRIIIT+RDEHLLK HGVD++YK  GL+ DE++ LF ++AFK+  P  + 
Sbjct: 311 AGRHDWFGSGSRIIITTRDEHLLKCHGVDKIYKVQGLSQDESIHLFCLRAFKSDYPADDY 370

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V+LS   + Y  GLPLAL+VLGSFL  +SV+EW S L RL+  P  EIL+ L ISFDGL+
Sbjct: 371 VELSNEFVNYCNGLPLALDVLGSFLFDKSVNEWTSALRRLKQIPNQEILEKLFISFDGLE 430

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           E+EKKIFLDIACFF G D+DYV   LE  GF+P +GIR LI K LIT+    +WMHDLLQ
Sbjct: 431 EVEKKIFLDIACFFNGEDKDYVIKVLESRGFYPHVGIRDLINKSLITISKERIWMHDLLQ 490

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G++IV+++S EE GKRSRLW  E+V HVL+  TGTE VE IVLD+   E+E     SA
Sbjct: 491 EMGREIVRQESQEEPGKRSRLWLYEDVYHVLSNDTGTEQVEAIVLDSCEQEDEEL---SA 547

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           KAF+KM  LR LK+ NL L  GLEYLSN+LR L W  YP K  PS  Q ++ IE++M  S
Sbjct: 548 KAFTKMKRLRFLKLRNLHLSEGLEYLSNKLRYLEWDRYPFKSFPSTFQPNELIELHMRCS 607

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH------- 472
            I  +WKGIK L  LKV+ LS+S NLI+  DF   PNLE+L LEGCTRL E+H       
Sbjct: 608 NIKHMWKGIKPLKMLKVIDLSYSVNLIKTMDFKDVPNLEELNLEGCTRLLEVHQSIGVLR 667

Query: 473 ---------PSLLLHNKLI--------ILNMKDCTSL-ITLPGKILMKSLEKLNLK---- 510
                    PS  L + L+         L  K+   + + LP    +KSL  LNL     
Sbjct: 668 EWEIAPRQLPSTKLWDFLLPWQKFPQRFLTQKNPNPMAMALPALFSLKSLRSLNLSYCNL 727

Query: 511 ---SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELL 566
              +LP+ +S    L T ++SG+  F   P  +  +  L +        ++  P    L 
Sbjct: 728 TDGALPSDLSCFPLLKTFNLSGN-NFVSIPSSISRLSKLEDFQFSNCKRLQSFP---NLP 783

Query: 567 SGLVLLNLKNCRSLE-ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT 625
           S ++ L+++ C +LE +LP + S+   L ++   GC +L+  P++  S+  +S   ++G 
Sbjct: 784 SSILFLSMEGCSALETLLPKSNSSQFELFNICAEGCKRLQLLPDLSSSILKIS---VEGF 840

Query: 626 SIKEV 630
           S KE 
Sbjct: 841 SSKET 845



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 189/380 (49%), Gaps = 50/380 (13%)

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
            K FP   +   +L EL +  ++IK +   I+ L  L++++LS   NL++       + +
Sbjct: 587 FKSFPSTFQP-NELIELHMRCSNIKHMWKGIKPLKMLKVIDLSYSVNLIK-TMDFKDVPN 644

Query: 664 LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPIN------LMRKS- 716
           L+ LNL GC +L  V +++G    L E +I+   +P +  W   +P        L +K+ 
Sbjct: 645 LEELNLEGCTRLLEVHQSIG---VLREWEIAPRQLPSTKLWDFLLPWQKFPQRFLTQKNP 701

Query: 717 --VALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITH 774
             +A+ LP+L  L SLR LNL+ CNL +GALPSD+     LK   LS N+FVS+P+SI+ 
Sbjct: 702 NPMAMALPALFSLKSLRSLNLSYCNLTDGALPSDLSCFPLLKTFNLSGNNFVSIPSSISR 761

Query: 775 LSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLD--- 831
           LSKL + +  +CKRLQS P LP +I  + + GC++L TLL      KS+S+     +   
Sbjct: 762 LSKLEDFQFSNCKRLQSFPNLPSSILFLSMEGCSALETLLP-----KSNSSQFELFNICA 816

Query: 832 ----SLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRP 887
                L+LL +  L+ S+L+  +E  S+     ++ V  S  P    + N   S+ V + 
Sbjct: 817 EGCKRLQLLPD--LSSSILKISVEGFSSKETSPNLFVTHSSKPSMLTFINILKSVEV-QS 873

Query: 888 SNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLN-CHIGHGIYGIGFRDKFGQAG 946
            N+    ++ GY      H L   R ++     P+ Q++ C  G  I G           
Sbjct: 874 ENIPLVARMSGY-----LHYLLRHRHSSLGFFNPSTQVSVCLAGSEIPG----------- 917

Query: 947 SDHLWLLYLSRQTCYDIRLP 966
               W  Y S  +  +++LP
Sbjct: 918 ----WFNYQSPGSSLEMQLP 933


>gi|359496030|ref|XP_002277205.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1195

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 308/738 (41%), Positives = 436/738 (59%), Gaps = 78/738 (10%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M SR +++  L+   S DVR++GI GM G+GKTT+AR +Y+ +SH+FE+S FL NV E  
Sbjct: 326  MSSRIKEVESLLFIESFDVRIVGIWGMDGIGKTTLARAIYNQVSHQFESSAFLLNVEEDF 385

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
             K G + L+++LLS L+   D+   N+  G   +  RL+ KKV +++DDV D + L  L 
Sbjct: 386  KKEGSIGLEQKLLSLLV---DDRNLNI-RGHTSIKRRLRSKKVFIMLDDVKDQEILGYLT 441

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
             N++ FG GSRIIIT++D++LL +H V+  Y+   L+++EA+++    + K   P  + +
Sbjct: 442  ENQDSFGHGSRIIITTKDKNLLTSHLVN-YYEIRKLSHEEAMEVLRRHSSKHKLPEDDLM 500

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            +LS R+  YA GLPLAL++L SFL G    EW+S L++L+  P  +I  +L+IS+D L  
Sbjct: 501  ELSRRVTTYAQGLPLALKILSSFLFGMKKHEWKSYLDKLKGTPNPDINKVLRISYDELDN 560

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
              K +F+DIACFFKG D+DYV   LEGCGF P  GIR L++K  IT+ NN L MHDL+Q 
Sbjct: 561  KVKNMFMDIACFFKGKDKDYVMEILEGCGFFPACGIRTLLDKSFITISNNKLQMHDLIQH 620

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G ++V++ SP E GK SRLW  E+V HV+ ++TGTE VEGI LD   +  E++   +++
Sbjct: 621  MGMEVVRQNSPNEPGKWSRLWSHEDVSHVVKKNTGTEEVEGIFLD-LSNLQEIHF--TSE 677

Query: 361  AFSKMTNLRLLKI-----------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLP 403
             F+++  LRLLK+                 C +   + L++ SN LR L W GY LK LP
Sbjct: 678  GFTRINKLRLLKVYKSHISKDSKCTFKKEECKVYFSHNLKFHSNDLRYLYWYGYSLKSLP 737

Query: 404  SNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
             N   ++ +E  M YS I +LWKGIK L+KLK M LSHS+ L+ +PD + A NLE+L+LE
Sbjct: 738  DNFNPERLLEFNMPYSHIKQLWKGIKVLEKLKFMELSHSQCLVEIPDLSRASNLERLVLE 797

Query: 464  GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLS 523
            GC  L  IHPSL + NKLI L+++DC                 +NL+  P +I  LK L 
Sbjct: 798  GCIHLCAIHPSLGVLNKLIFLSLRDC-----------------INLRHFPNSIE-LKSLQ 839

Query: 524  TLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEIL 583
               +SG  K  +FPEI  +MEHLSEL L+G  I  LP SIE   GLV+L+L NC+ L  L
Sbjct: 840  IFILSGCSKLEKFPEIRGYMEHLSELFLDGIGIEELPSSIEYAIGLVVLDLTNCKELRSL 899

Query: 584  PVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF-----------LDGTSIKEVPS 632
            P ++ NL+ L++L LS CSKL+  P+    +K L +L+               S+  +  
Sbjct: 900  PNSICNLESLKTLLLSDCSKLESLPQNFGKLKQLRKLYNQTFAFPLLLWKSSNSLDFLLP 959

Query: 633  SIELLTKLELLNLSDC------------------------KNLVRLPSSIIALKSLKTLN 668
             +  L  L+ LNLSDC                         N V LPSSI  L  L  L 
Sbjct: 960  PLSTLRSLQDLNLSDCNIVDGPQLSVLSLMLSLKKLNLTGNNFVSLPSSISQLPQLTVLK 1019

Query: 669  LSGCFKLENVPETLGQIE 686
            L  C +L+ +PE L  IE
Sbjct: 1020 LLNCRRLQAIPELLSSIE 1037



 Score =  174 bits (440), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 126/319 (39%), Positives = 194/319 (60%), Gaps = 11/319 (3%)

Query: 496  PGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-T 554
            P ++L  ++   ++K L   I  L+ L  +++S      E P++     +L  L LEG  
Sbjct: 742  PERLLEFNMPYSHIKQLWKGIKVLEKLKFMELSHSQCLVEIPDL-SRASNLERLVLEGCI 800

Query: 555  AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
             +  +  S+ +L+ L+ L+L++C +L   P ++  LK L+   LSGCSKL+KFPEI   M
Sbjct: 801  HLCAIHPSLGVLNKLIFLSLRDCINLRHFPNSIE-LKSLQIFILSGCSKLEKFPEIRGYM 859

Query: 615  KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
            + LSELFLDG  I+E+PSSIE    L +L+L++CK L  LP+SI  L+SLKTL LS C K
Sbjct: 860  EHLSELFLDGIGIEELPSSIEYAIGLVVLDLTNCKELRSLPNSICNLESLKTLLLSDCSK 919

Query: 675  LENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLN 734
            LE++P+  G+++ L +L     A P    W S         S+   LP LS L SL+ LN
Sbjct: 920  LESLPQNFGKLKQLRKLYNQTFAFP-LLLWKS-------SNSLDFLLPPLSTLRSLQDLN 971

Query: 735  LTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ 794
            L+DCN+++G   S +  + SLK+L L+ N+FVSLP+SI+ L +L  ++L +C+RLQ++P+
Sbjct: 972  LSDCNIVDGPQLSVLSLMLSLKKLNLTGNNFVSLPSSISQLPQLTVLKLLNCRRLQAIPE 1031

Query: 795  LPPNIRQVRVNGCASLVTL 813
            L  +I  +  + C  L T+
Sbjct: 1032 LLSSIEVINAHNCIPLETI 1050


>gi|105922786|gb|ABF81437.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1289

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 309/687 (44%), Positives = 426/687 (62%), Gaps = 53/687 (7%)

Query: 32   KTTIARVVYDLISHEFEASGFLDNVREI-SSKGGLVSLQRQLLSQLLKLADNSIWNVFDG 90
            KTT+ARV+YD I  +FE S FL NVRE+ + K G   LQ QLLS++L +   S+W+ + G
Sbjct: 352  KTTVARVLYDRIRWQFEGSCFLANVREVFAEKDGPRRLQEQLLSEIL-MERASVWDSYRG 410

Query: 91   IDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEV 150
            I+M+  RL+ KK+LL++DDV D KQL+ LA    WFG GSRIIITSRD +++  +   ++
Sbjct: 411  IEMIKRRLRLKKILLILDDVDDKKQLEFLAEEPGWFGPGSRIIITSRDTNVITGNDDTKI 470

Query: 151  YKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVD 210
            Y+   LN D+AL LF+ KAFK  QP ++ V+LS +++ YA GLPLALEV+GSFL GRS+ 
Sbjct: 471  YEAEKLNDDDALMLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFLYGRSIP 530

Query: 211  EWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGF 270
            EWR  + R+   P  +I+D+L+ISFDGL E +KKIFLDIACF KG  +D +   L+ CGF
Sbjct: 531  EWRGAINRMNEIPDCKIIDVLRISFDGLHESDKKIFLDIACFLKGFKKDRIIRILDSCGF 590

Query: 271  HPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVL 330
            H  IG +VLIEK LI+V  + +WMH+LLQ +G++IV+ +SPEE G+RSRLW  E+VC  L
Sbjct: 591  HAHIGTQVLIEKSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYEDVCLAL 650

Query: 331  TESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLR 390
             ++TG E +E I LD    +   +   + +AFSKM+ LRLLKI N+QL  G E LSN+L+
Sbjct: 651  MDNTGKEKIEAIFLDMPGIKESQW---NIEAFSKMSRLRLLKINNVQLSEGPEDLSNKLQ 707

Query: 391  LLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD 450
             L W  YP K LP  LQ+D+ +E++M  S + +LW G K    LK++ LS+S  L + PD
Sbjct: 708  FLEWHSYPSKSLPVGLQVDQLVELHMANSNLEQLWYGCKSAVNLKIINLSNSLYLTKTPD 767

Query: 451  FTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK 510
             TG PNLE LILEGCT L E+HPSL  H KL  +N+ +C S+  LP  + M SL+     
Sbjct: 768  LTGIPNLESLILEGCTSLSEVHPSLAHHKKLQYMNLVNCKSIRILPNNLEMGSLK----- 822

Query: 511  SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLV 570
                       +  LD  G  K  +FP+IV +M+ L  L L+GT I  L  S+  L GL 
Sbjct: 823  -----------VCILD--GCSKLEKFPDIVGNMKCLMVLRLDGTGITKLSSSMHHLIGLG 869

Query: 571  LLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSE------LFLDG 624
            LL++ +C++LE +P ++  LK L+ L LSGCS+LK  PE +  ++ L E      L LDG
Sbjct: 870  LLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESLEEFDNLKVLSLDG 929

Query: 625  TSIKEVPSSIELLTKLELLNLSDC------------------------KNLVRLPSSIIA 660
                 +P S+  L  LE+L L  C                         N V LP SI  
Sbjct: 930  FKRIVMPPSLSGLCSLEVLGLCACNLREGALPEDIGCLSSLRSLDLSQNNFVSLPKSINQ 989

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIES 687
            L  L+ L L  C  LE++P+   ++++
Sbjct: 990  LFELEMLVLEDCTMLESLPKVPSKVQT 1016



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 135/356 (37%), Positives = 189/356 (53%), Gaps = 66/356 (18%)

Query: 522  LSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSL 580
            L  +++S  L   + P++   + +L  L LEG T++  +  S+     L  +NL NC+S+
Sbjct: 751  LKIINLSNSLYLTKTPDLT-GIPNLESLILEGCTSLSEVHPSLAHHKKLQYMNLVNCKSI 809

Query: 581  EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
             ILP  +  +  L+   L GCSKL+KFP+IV +MK L  L LDGT I ++ SS+  L  L
Sbjct: 810  RILPNNLE-MGSLKVCILDGCSKLEKFPDIVGNMKCLMVLRLDGTGITKLSSSMHHLIGL 868

Query: 641  ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
             LL+++ CKNL  +PSSI  LKSLK L+LSGC +L+ +PE LG++ESLEE D        
Sbjct: 869  GLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESLEEFDN------- 921

Query: 701  STSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
                   + ++  ++ V    PSLSGLCSL  L L  CNL EGALP DIG L SL+ L L
Sbjct: 922  ----LKVLSLDGFKRIVM--PPSLSGLCSLEVLGLCACNLREGALPEDIGCLSSLRSLDL 975

Query: 761  SKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLC 820
            S+N+FVSLP SI  L +L  + LEDC  L+SLP++P  ++                    
Sbjct: 976  SQNNFVSLPKSINQLFELEMLVLEDCTMLESLPKVPSKVQT------------------- 1016

Query: 821  KSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQ 876
                                            +SN R    + +PG+EIP WF +Q
Sbjct: 1017 -------------------------------GLSNPRPGFGIAIPGNEIPGWFNHQ 1041


>gi|399920215|gb|AFP55562.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1083

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 301/668 (45%), Positives = 417/668 (62%), Gaps = 18/668 (2%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD++ E +  L+   ++DVR IGI GMGGLGKTT+ARVVY+ ISH F+   FL N+RE+S
Sbjct: 148 MDTKLEDIYDLLVEEANDVRFIGIWGMGGLGKTTLARVVYEEISHRFDVCVFLANIREVS 207

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +  GLV LQ+Q+LSQ+LK  +  +W+V+ GI M    L  K VLLV+DDV   +QL+ L 
Sbjct: 208 ATHGLVYLQKQILSQILKEENVKVWDVYSGITMTKRCLCNKAVLLVLDDVDQSEQLEHLV 267

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G ++WFG  SRIIIT+R++ +L THGV++ Y+  GLN DEALQLF+ KAF+  +P ++  
Sbjct: 268 GEKDWFGLRSRIIITTRNQRVLVTHGVEKPYELKGLNKDEALQLFSWKAFRKCEPEEDYA 327

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +L    + YAGGLPLAL+ LGSFL  RS+  W S L++L+  P   + +IL++SFDGL E
Sbjct: 328 ELCKSFVTYAGGLPLALKTLGSFLYKRSLHSWSSALQKLQQTPNRSVFEILKLSFDGLDE 387

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQ 299
           +EKKIFLDIACF +  D + +   +    F P I I VL+EK L+T+  +N + +HDL+ 
Sbjct: 388 MEKKIFLDIACFRRLYDNESMIEQVHSFDFCPRIIIDVLVEKSLLTISSDNRVGVHDLIH 447

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G +IV RQ  +E G RSRL    ++ HV T +TGTE +EGI+L     E   +   + 
Sbjct: 448 EMGCEIV-RQENKEPGGRSRLCLHNDIFHVFTNNTGTEAIEGILLHLAELEEADW---NL 503

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           +AFSKM  L+LL I NL+L  G  YL N LR L W  YP K LP   Q DK  E+ + +S
Sbjct: 504 EAFSKMCKLKLLYIHNLRLSLGPIYLPNALRFLNWSWYPSKSLPPCFQSDKLTELSLVHS 563

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
            I  LW GIK+   LK + LS+S NL R PDFTG PNLEKL+LEGCT L E+H S  L  
Sbjct: 564 NIDHLWNGIKYSRNLKSIDLSYSINLTRTPDFTGIPNLEKLVLEGCTNLVEVHQSTGLLQ 623

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKF 533
           KL ILN+++C S+ +LP ++ M+ LE  +      LK +P  +  +K LS L +SG    
Sbjct: 624 KLRILNLRNCKSIKSLPSEVHMEFLETFDVSGCSKLKMIPEFVGQMKRLSRLSLSGT-AV 682

Query: 534 REFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLV-----LLNLKNCRSLEILPVTVS 588
            + P I    E L EL L G  IR  P S+ L   L+     L   K+   L  L  ++ 
Sbjct: 683 EKLPSIEHLSESLVELDLSGIVIREQPYSLFLKQNLIVSSFGLFPRKSPHPLIPLLASLK 742

Query: 589 NLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
           +   L +LKL+ C+  + + P  + S+  L  L+L G +   +P+SI LL+KL  +N+ +
Sbjct: 743 HFSSLTTLKLNDCNLCEGELPNDIGSLSSLEWLYLGGNNFSTLPASIHLLSKLRYINVEN 802

Query: 648 CKNLVRLP 655
           CK L +LP
Sbjct: 803 CKRLQQLP 810



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 178/540 (32%), Positives = 255/540 (47%), Gaps = 111/540 (20%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
            L+S+ LS    L + P+    + +L +L L+G T++ EV  S  LL KL +LNL +CK++
Sbjct: 578  LKSIDLSYSINLTRTPDFT-GIPNLEKLVLEGCTNLVEVHQSTGLLQKLRILNLRNCKSI 636

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTS-------- 703
              LPS +  ++ L+T ++SGC KL+ +PE +GQ++ L  L +SGTAV    S        
Sbjct: 637  KSLPSEV-HMEFLETFDVSGCSKLKMIPEFVGQMKRLSRLSLSGTAVEKLPSIEHLSESL 695

Query: 704  --------------WYSYIPINLMRKSVALK-----------LPSLSGLCSLRKLNLTDC 738
                          +  ++  NL+  S  L            L SL    SL  L L DC
Sbjct: 696  VELDLSGIVIREQPYSLFLKQNLIVSSFGLFPRKSPHPLIPLLASLKHFSSLTTLKLNDC 755

Query: 739  NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPN 798
            NL EG LP+DIG+L SL+ LYL  N+F +LP SI  LSKL  I +E+CKRLQ LP+L  N
Sbjct: 756  NLCEGELPNDIGSLSSLEWLYLGGNNFSTLPASIHLLSKLRYINVENCKRLQQLPELSAN 815

Query: 799  IRQVRVNGCASLVTLLDALKLCK-SDSTMIACLDSLKLLGNKSLA---FSMLREYLEAVS 854
                R + C SL    D   LC+ + S  + C++ L ++GN+  +   +S+L+ ++E   
Sbjct: 816  DVLSRTDNCTSLQLFPDPPDLCRITTSFWLNCVNCLSMVGNQDASYFLYSVLKRWIEIQV 875

Query: 855  NTR---------------QHLSVVVPGSEIPEWFMYQNEGSSITVTRPSN-LYNKKKLVG 898
             TR               + L VV+PGSEIPEWF  Q+ G  +T   PS+  Y+  KL+G
Sbjct: 876  LTRCDMTVHMQETHRRPLESLKVVIPGSEIPEWFNNQSVGDRVTEKLPSDECYS--KLIG 933

Query: 899  YAICCVFHVLKNSRGNNCFGSYPTHQLNCHI-------GHGIYGIGFRDKFGQAGSDHLW 951
            +A+C +     N        + P     CHI       G  I  +G   K  Q  SDHL+
Sbjct: 934  FAVCALIVPQDNPSAVPEESNLPD---TCHIVRLWNNYGFDIASVGIPVK--QFVSDHLY 988

Query: 952  LLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWL--------GQGLEVKMCGLHPVYM 1003
            LL L               L PF      + FE            +G++VK CG+  +Y 
Sbjct: 989  LLVL---------------LNPFRKPENCLEFEFSFEIRRAVGNNRGMKVKKCGVRALYE 1033

Query: 1004 DEVEELDQTTNQPSRFTVYNLNEFDQHFVGSKMIVATTSKRSLTEYFGAEASGSGCCDDE 1063
             + EEL    NQ                  SK    +  + ++ E   A  SGSG  DDE
Sbjct: 1034 HDTEELISKMNQ------------------SKSSSISLYEEAMDEQKEAATSGSGGSDDE 1075


>gi|359493496|ref|XP_003634615.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1180

 Score =  514 bits (1323), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 380/951 (39%), Positives = 522/951 (54%), Gaps = 136/951 (14%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MDSR E L   +  GS DVR +GI GM G+GKTTIA  +YD I  +F+   FL NVRE S
Sbjct: 198  MDSRMEDLLSRLCIGSDDVRFVGIWGMAGIGKTTIAEAIYDRIYTKFDGCCFLKNVREDS 257

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
             + GL  LQ  LLSQ+L      I N+  GI+ + +RL+ K+VL+V+DDVV  +QL++LA
Sbjct: 258  QRHGLTYLQETLLSQVL----GGINNLNRGINFIKARLRPKRVLIVLDDVVHRQQLEALA 313

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            GN +WFGSGSRIIIT+R++ LL    VDE+YK   L YDEAL+LF   AF+   P ++ +
Sbjct: 314  GNHDWFGSGSRIIITTREKRLLIEQEVDEIYKVEKLEYDEALKLFCQYAFRYKHPTEDFM 373

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            QL    + Y GGLPLAL+VLGS L  +S+ EW+S L++L   P  E+L++L+ SFDGL +
Sbjct: 374  QLCHHAVDYTGGLPLALKVLGSCLYRKSIHEWKSELDKLNQFPNKEVLNVLKTSFDGLDD 433

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             EK +FLDIA F+KG D+D+V   L+   F PV  I  L++K LIT+ +N L+MHDLLQE
Sbjct: 434  NEKNMFLDIAFFYKGEDKDFVIEVLDN--FFPVSEIGNLVDKSLITISDNKLYMHDLLQE 491

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G +IV+++S ++ GKRSRL   E++  VLT + GTE VEG+V D    +    L  S  
Sbjct: 492  MGWEIVRQESIKDPGKRSRLRVHEDIHDVLTTNKGTEAVEGMVFDLSASKE---LNLSVD 548

Query: 361  AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
            AF+KM                     N+LRLL  R Y  +F  S+  + +  E  +  +R
Sbjct: 549  AFAKM---------------------NKLRLL--RFYNCQFYGSSEYLSE--EELIASTR 583

Query: 421  IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH--PSLLLH 478
                W G  +       +  H     + P    + NL  L   G    Y +   PS+   
Sbjct: 584  DAWRWMGYDNSPYNDSKL--HLSRDFKFP----SNNLRSLHWHG----YPLKSLPSIFHP 633

Query: 479  NKLIILNMKDCTSLIT--LPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
             KL+ LNM  C SL+     GK   K+ EKL    L                        
Sbjct: 634  KKLVELNM--CYSLLKQLWEGK---KAFEKLKFIKL------------------------ 664

Query: 537  PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
                 H +HL++      A +           L  + L  C SL  L  ++  LK L  L
Sbjct: 665  ----SHSQHLTKTPDFSAAPK-----------LRRIILNGCTSLVKLHPSIGALKELIFL 709

Query: 597  KLSGCSKLKKFPEIVR-SMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
             L GCSKL+KFPE+V+ +++DLS + L+GT+I+E+PSSI  L +L LLNL +CK L  LP
Sbjct: 710  NLEGCSKLEKFPEVVQGNLEDLSGISLEGTAIRELPSSIGGLNRLVLLNLRNCKKLASLP 769

Query: 656  SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH--------------- 700
             SI  L SL+TL LSGC KL+ +P+ LG+++ L EL + GT +                 
Sbjct: 770  QSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVELHVDGTGIKEVPSSINLLTNLQELS 829

Query: 701  --------STSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNL 752
                    S SW              L+LP LSGL SL+ LNL+DCNL+EGALP D+ +L
Sbjct: 830  LAGCKGWESKSWNLAFSFGSWPTLEPLRLPRLSGLYSLKILNLSDCNLLEGALPIDLSSL 889

Query: 753  CSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVT 812
             SL+ L LS+NSF+++P +++ LS+L  + L  CK LQSLP+LP +IR +    C SL T
Sbjct: 890  SSLEMLDLSRNSFITIPANLSGLSRLHVLMLPYCKSLQSLPELPSSIRYLNAEACTSLET 949

Query: 813  LLDALKLCKSDS------TMIACL--------DSLK--LLGNKSLAF--SMLREYLEAVS 854
               +   C S            C         DS+K  LLG + LA     L+ +L    
Sbjct: 950  FSCSPSACTSKRYGGLRLEFSNCFRLMENEHNDSVKHILLGIQLLASIPKFLQPFLGGFI 1009

Query: 855  NTRQHL-SVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCV 904
            +   +L   +VPGS IPEWF+ Q+ GSS+TV  P + YN  KL+G A+C V
Sbjct: 1010 DGPHNLYDAIVPGSRIPEWFVDQSTGSSVTVELPPHWYN-TKLMGMAVCAV 1059


>gi|224130518|ref|XP_002328629.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838611|gb|EEE76976.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1121

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 317/692 (45%), Positives = 440/692 (63%), Gaps = 27/692 (3%)

Query: 1   MDSRCEKLR-FLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           MD R E++  +L     +DVR+IGICGMGG+GKTTIAR VY+ +   FE S FL NVRE+
Sbjct: 195 MDWRLEEMSLYLGVEQLNDVRVIGICGMGGIGKTTIARAVYEKMLGHFEGSSFLANVREV 254

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
             K GLV LQ QLLS  L      I +V  G++ +  RL+ + VL+V+DDV  + QL+SL
Sbjct: 255 EEKHGLVRLQEQLLSDTLMDRRTKISDVHRGMNEIRVRLRSRMVLVVLDDVDQLVQLESL 314

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G+R WF +GSR+IIT+RDE LLK  GVD++Y+   LN  EA+QLF +KAF++Y P ++ 
Sbjct: 315 VGDRNWFDNGSRVIITTRDELLLKQFGVDKIYRVASLNNIEAVQLFCLKAFRSYCPPEDY 374

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSG-RSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
           V  + ++++YA GLPLAL VLGSF SG RSV+ W  +L+RL+  P   ILD L+ISFDGL
Sbjct: 375 VLQTIQVVKYADGLPLALHVLGSFFSGIRSVELWNHSLKRLKDIPDKGILDKLKISFDGL 434

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
            E+EKKIFLDIACFF G + D VT  +E  GF+P IGIR+L+EK LI + +N +WMHDLL
Sbjct: 435 NEVEKKIFLDIACFFNGWEEDCVTKLMESSGFYPQIGIRILVEKFLINISDNRVWMHDLL 494

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           QE+G+QIV+R+S EE GKR+RLW  E+V HVL  +TGT+ VEGIVL++    + +YL  S
Sbjct: 495 QEMGRQIVKRESHEEPGKRTRLWLCEDVIHVLLNNTGTDKVEGIVLNSNDEVDGLYL--S 552

Query: 359 AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
           A++  KM  LR+LK+ N+ L   ++YLSN LR L W  YP K LPS  Q DK +E++M +
Sbjct: 553 AESIMKMKRLRILKLQNINLSQEIKYLSNELRYLEWCRYPFKSLPSTFQPDKLVELHMRH 612

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           S I +LW+G++ L  L+ + L HS NLI+ PDF   PNLEKL LEGC +L +I  S+ + 
Sbjct: 613 SSIKQLWEGVRPLKLLRAIDLRHSRNLIKTPDFRQVPNLEKLNLEGCRKLVKIDDSIGIL 672

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
             L+ LN+KDC                 + L  LPT I  LK L  L++ G  K  + PE
Sbjct: 673 KGLVFLNLKDC-----------------VKLACLPTNICELKTLRILNLYGCFKLEKLPE 715

Query: 539 IVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKL 598
           ++ ++ +L EL +  TAI  LP +  L   L +L+   C+     P +  +L   RSL  
Sbjct: 716 MLGNVINLEELDVGRTAITQLPSTFGLWKKLKVLSFDGCKGPA--PKSWYSLFSFRSLPR 773

Query: 599 SGCSKLKKFPEIVRSMKDLSELFLDGTSI--KEVPSSIELLTKLELLNLSDCKNLVRLPS 656
           + C  +      + ++  L++L L   ++   E+P  +     LE L+L    N VR+PS
Sbjct: 774 NPCP-ITLMLSSLSTLYSLTKLNLSNCNLMEGELPDDMSCFPSLEELDLIG-NNFVRIPS 831

Query: 657 SIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
           SI  L  LK+L L  C KL+++P+   ++E L
Sbjct: 832 SISRLSKLKSLRLGNCKKLQSLPDLPSRLEYL 863



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 144/386 (37%), Positives = 210/386 (54%), Gaps = 42/386 (10%)

Query: 569 LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSI 627
           LV L++++  S++ L   V  LK LR++ L     L K P+  R + +L +L L+G   +
Sbjct: 605 LVELHMRHS-SIKQLWEGVRPLKLLRAIDLRHSRNLIKTPDF-RQVPNLEKLNLEGCRKL 662

Query: 628 KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
            ++  SI +L  L  LNL DC  L  LP++I  LK+L+ LNL GCFKLE +PE LG + +
Sbjct: 663 VKIDDSIGILKGLVFLNLKDCVKLACLPTNICELKTLRILNLYGCFKLEKLPEMLGNVIN 722

Query: 688 LEELDISGTAV-----------------------PHSTSWYSYIPINLMRKS---VALKL 721
           LEELD+  TA+                       P   SWYS      + ++   + L L
Sbjct: 723 LEELDVGRTAITQLPSTFGLWKKLKVLSFDGCKGPAPKSWYSLFSFRSLPRNPCPITLML 782

Query: 722 PSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNI 781
            SLS L SL KLNL++CNLMEG LP D+    SL+EL L  N+FV +P+SI+ LSKL ++
Sbjct: 783 SSLSTLYSLTKLNLSNCNLMEGELPDDMSCFPSLEELDLIGNNFVRIPSSISRLSKLKSL 842

Query: 782 ELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTM----IACLDSLKLLG 837
            L +CK+LQSLP LP  +  + V+GCASL TL +  + C     +    + C +     G
Sbjct: 843 RLGNCKKLQSLPDLPSRLEYLGVDGCASLGTLPNLFEECARSKFLSLIFMNCSELTDYQG 902

Query: 838 NKSLAFSMLREYLEAV--SNTRQH----LSVVVPGSEIPEWFMYQNEGSSITVT-RPSNL 890
           N S+  + L+ YL  +  S  + H         PGSEIP WF +++ G S+T+   P   
Sbjct: 903 NISMGLTWLKYYLHFLLESGHQGHPASWFFTCFPGSEIPSWFHHKSVGHSLTIRLLPYEH 962

Query: 891 YNKKKLVGYAICCVFHVLKNSRGNNC 916
           ++  K +G A+C  F  L    G++C
Sbjct: 963 WSSSKWMGLAVCAFFEELDC--GDSC 986


>gi|225460105|ref|XP_002275120.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Vitis
            vinifera]
          Length = 1915

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 402/1137 (35%), Positives = 590/1137 (51%), Gaps = 157/1137 (13%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MD   ++L+ L+ +   DV M+GI G+GG+GKTTIA   Y+ IS  F+ S FL  V E  
Sbjct: 191  MDFHLKQLKSLVKTELDDVHMVGIYGIGGIGKTTIAMAFYNDISSRFDGSSFLRGVGE-K 249

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            SKGGL+ LQ++L   +LK       +  +GI+ +  RL  K+VL+V+DDV +++QL++LA
Sbjct: 250  SKGGLLELQKKLFKDILKCESTDFDDTSEGINGIKKRLCSKRVLIVLDDVEELEQLENLA 309

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY--QPLQE 178
            G   W+G+ S IIIT++D  LL  HGV+ +Y+   LN+ EA+ LFN  AFK    +P ++
Sbjct: 310  GKNGWYGAKSTIIITTKDTSLLSQHGVNILYEVKELNHKEAIDLFNWWAFKQNIPKPKED 369

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
               LS  ++ YA GLP+AL+VLG FL G+ +DEW+S L +LE  P  ++  +L++S++ L
Sbjct: 370  FESLSHCVVGYAKGLPIALKVLGGFLFGKKIDEWKSALHKLEKIPHMKVQSVLKVSYERL 429

Query: 239  QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
             + EK+IFLDIACFFKG D+D V+  L   G +  IGI+VL E+CLIT+  N L MHDLL
Sbjct: 430  DDTEKEIFLDIACFFKGKDKDLVSRIL---GRYADIGIKVLHERCLITISQNKLDMHDLL 486

Query: 299  QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
            Q++GQ+IV+++  +E GKRSRLW   +V  +LT +TGTE +EG+ ++     N++    S
Sbjct: 487  QQMGQEIVRQECLKEPGKRSRLWDSNDVDSMLTRNTGTEAIEGLFVE-IPTSNKMQF--S 543

Query: 359  AKAFSKMTNLRLLKICNLQLPN----GLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
              +F+KM  LRL  + N +  N      E+ S++LR L + G  L+ LP+N      +E+
Sbjct: 544  TNSFTKMNRLRLFIVYNKRYWNCFKGDFEFPSSQLRYLNFYGCSLESLPTNFNGRNLVEL 603

Query: 415  YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
             +  S I +LWKG +  + LKV+ L +S+ L+ +PDF+  PNLE L LEGCT L E  P 
Sbjct: 604  DLVRSGIKKLWKGDEIFNSLKVINLGYSKYLVEIPDFSSVPNLEILNLEGCTSL-ESFPK 662

Query: 475  LLLH-NKLIILNMKDCTSLITLPGKI-LMKSLEKLNLK------SLPTTISGLKCLSTLD 526
            +  + +KL  +N+   T++I +P  I  +  LE  NL       SLP +I  L  L TL 
Sbjct: 663  IKENMSKLREINLSG-TAIIEVPSSIEHLNGLEYFNLSGCFNLVSLPRSICNLSSLQTLY 721

Query: 527  VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVT 586
            +    K + FPE+ ++M +L  L+L  TAI  L  S+  L  L  L+L  C++L  LP +
Sbjct: 722  LDSCSKLKGFPEMKDNMGNLERLNLRFTAIEELSSSVGHLKALKHLDLSFCKNLVNLPES 781

Query: 587  VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLS 646
            + N+  L +L  S C K+K FPEI  +M +L  L L  T+I+E+P SI  L  L+ L+LS
Sbjct: 782  IFNISSLETLNGSMCLKIKDFPEIKNNMGNLERLDLSFTAIEELPYSIGYLKALKDLDLS 841

Query: 647  DCKNLVRLPSSIIALKSL-------------------------KTLNLSGCFKLENVPET 681
             C NLV LP SI  L SL                         ++LN + C   + V  +
Sbjct: 842  YCHNLVNLPESICNLSSLEKLRVRNCPKLQRLEVNLEDGSHILRSLNTTCCIIKQGVIWS 901

Query: 682  LGQIESLEEL------------------------------DISGTAV------PHSTSWY 705
             G+  SLE L                              D++G  +      P S    
Sbjct: 902  NGRFSSLETLHLRCSQMEGEILNHHIWSLSSLVELCIRNSDLTGRGILSDSFYPSSLVGL 961

Query: 706  SYIPINLMRK-----------SVALK--LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNL 752
            S    NLM             SV ++  L  +  L SL KL+L +CNLME  + SDI NL
Sbjct: 962  SVGNFNLMEVGDKGESNDSPLSVGIQGILNDIWNLSSLVKLSLNNCNLMEVGILSDIWNL 1021

Query: 753  C-------------------------SLKELYLSKNSFVSLPTSITHLSKLLNIELEDCK 787
                                      SL+EL L  N F S+P  I  LS L  + L  CK
Sbjct: 1022 SSLVKLSLNNCNLKEGEILNRICHLPSLEELSLDGNHFSSIPAGIRLLSNLRALNLRHCK 1081

Query: 788  RLQSLPQLPPNIRQVRVNGCASLVTL----LDALKLCKSDSTMIACLDSLKLLGN-KSLA 842
            +LQ +P+LP ++R + ++ C  L  +     + L L    S  I+ L +  LL   KS  
Sbjct: 1082 KLQEIPELPSSLRDLYLSHCKKLRAIPELPSNLLLLDMHSSDGISSLSNHSLLNCLKSKL 1141

Query: 843  FSMLREYLEAVSNTRQHLSVVVP-GSEIPEWFMYQNEGS-SITVTRPSNLYNKKKLVGYA 900
            +  L+  L A       + +V+P  S I E    Q+ GS  + +  P N Y    L+G+A
Sbjct: 1142 YQELQISLGASEFRDMAMEIVIPRSSGILEGTRNQSMGSHQVRIELPQNWYENNDLLGFA 1201

Query: 901  ICCVFHVLKNSRGNNCFGSYPTHQLNCHIG-HGIYGIGFRDKFG--------------QA 945
            +CCV+  + +     C    P   L+C +   G       DKF                +
Sbjct: 1202 LCCVYVWVPDEFNPRC---EPLSCLDCKLAISGNCQSKDVDKFQIESECHCSDDDDDHGS 1258

Query: 946  GSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVY 1002
             SD +W++Y  +     I+    SN    +  H   SF+      LE K CG+HP+Y
Sbjct: 1259 ASDLVWVIYYPKDA---IKKQYLSN----QWTHFTASFK---SVTLEAKECGIHPIY 1305



 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 184/528 (34%), Positives = 262/528 (49%), Gaps = 93/528 (17%)

Query: 508  NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
            NL+SLP+TI  LK L+TL  SG  +   FPEI E +E+L ELHLEGTAI  LP SI+ L 
Sbjct: 1349 NLESLPSTICELKSLTTLSCSGCSQLTIFPEIFETLENLRELHLEGTAIEELPSSIQHLR 1408

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSI 627
            GL  LNL  C +L  LP T+  LK L  L  +GCS+LK FPEI+ ++++L EL L GT+I
Sbjct: 1409 GLQYLNLAYCNNLVSLPETIYRLKSLVFLSCTGCSQLKSFPEILENIENLRELSLHGTAI 1468

Query: 628  KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
            KE+P+SIE L  L+ L+LS+C NLV LP SI  L+ LK LN++ C KLE  P+ LG ++ 
Sbjct: 1469 KELPTSIERLGGLQDLHLSNCSNLVNLPESICNLRFLKNLNVNLCSKLEKFPQNLGSLQR 1528

Query: 688  LEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPS 747
            LE L  +G                                        +D N + GA+ S
Sbjct: 1529 LELLGAAG----------------------------------------SDSNRVLGAIQS 1548

Query: 748  DIGNLCSLKELYLSKNSF-VSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNG 806
            D   + S K L LS N F   +P SI  LSKL  ++L  C++L  +P+LPP++R + V+ 
Sbjct: 1549 DDCRMSSWKALNLSINYFSSIIPISIIQLSKLRVLDLSHCQKLLQIPELPPSLRILDVHA 1608

Query: 807  CASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLR------EYLEAVSNTRQHL 860
            C  L TL        S S++              L FS+ R      E  E  S   + +
Sbjct: 1609 CPCLETL-------SSPSSL--------------LGFSLFRCFKSAIEEFECGSYWSKEI 1647

Query: 861  SVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLK-NSRGNNCFG 918
             +V+PG+  IPEW   + +GS IT+  P + Y+    +G A+  V+  L   S  + C  
Sbjct: 1648 QIVIPGNNGIPEWISQRKKGSEITIELPMDWYHNNDFLGVALYSVYVPLHIESNEDPC-- 1705

Query: 919  SYPTHQLNCHIGHGIYGIGFRDKFGQAG--SDHLWLL--------YLSR---------QT 959
                 QLN H+ H  +      KF      S   W +        YL           + 
Sbjct: 1706 -SLKCQLNFHVHHFEFLDDLPSKFWSMNGLSYEFWPVDELSFRRGYLCHHNGDELNEVRV 1764

Query: 960  CYDIRLPLESNLEPFESNHVNVSFEPWLG-QGLEVKMCGLHPVYMDEV 1006
             Y  ++ + +     +  H+  SF  +LG + ++VK CG H + M ++
Sbjct: 1765 AYYPKVAIPNQYWSNKWRHLKASFHGYLGSKQVKVKECGFHLISMPKI 1812



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 118/272 (43%), Gaps = 68/272 (25%)

Query: 413  EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
            E+++  + I EL   I+HL  L+ + L++  NL+ +P+                 +Y + 
Sbjct: 1389 ELHLEGTAIEELPSSIQHLRGLQYLNLAYCNNLVSLPE----------------TIYRL- 1431

Query: 473  PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
                    L+ L+   C+                  LKS P  +  ++ L  L + G   
Sbjct: 1432 ------KSLVFLSCTGCSQ-----------------LKSFPEILENIENLRELSLHGT-A 1467

Query: 533  FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKC 592
             +E P  +E +  L +LH                       L NC +L  LP ++ NL+ 
Sbjct: 1468 IKELPTSIERLGGLQDLH-----------------------LSNCSNLVNLPESICNLRF 1504

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIE----LLTKLELLNLSDC 648
            L++L ++ CSKL+KFP+ + S++ L  L   G+    V  +I+     ++  + LNLS  
Sbjct: 1505 LKNLNVNLCSKLEKFPQNLGSLQRLELLGAAGSDSNRVLGAIQSDDCRMSSWKALNLSIN 1564

Query: 649  KNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
                 +P SII L  L+ L+LS C KL  +PE
Sbjct: 1565 YFSSIIPISIIQLSKLRVLDLSHCQKLLQIPE 1596


>gi|105922434|gb|ABF81416.1| NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 925

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 302/627 (48%), Positives = 409/627 (65%), Gaps = 24/627 (3%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-I 59
           +DSR E L   +   + +   IGICGMGG+GKTT+ARV+YD I   FE S FL NVRE  
Sbjct: 31  IDSRLEVLNGYIGEETGEAIFIGICGMGGIGKTTVARVLYDRIRRRFEGSCFLANVREAF 90

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           + K G  SLQ++LLS +L   D +I +   GI+M+  +LQR K+L+V+DDV D KQL+ L
Sbjct: 91  AEKDGPRSLQKKLLSDILMERDINICDSSTGIEMIKQKLQRIKILVVLDDVNDRKQLEYL 150

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           A    WFG GSRIIITSRD ++L  +   ++Y+   LN D+AL LF+ KAFK  QP +  
Sbjct: 151 AKEPGWFGPGSRIIITSRDTNVLIGNDDTKIYEAEKLNDDDALMLFSQKAFKNDQPAEGF 210

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V+LS +++ YA GLPLA EV+GSFL  RS+ EWR  + R+   P  +I+D+L++SFDGL 
Sbjct: 211 VELSKQVVDYANGLPLAHEVIGSFLYERSIPEWRGAINRMNEIPDGKIIDVLRVSFDGLH 270

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           E +KKIFLDIACF KG  +D +T  LE  GFH  IGI VLIE+ LI+V  + +WMHDLLQ
Sbjct: 271 ESDKKIFLDIACFLKGFKKDRITRILESRGFHAGIGIPVLIERSLISVSRDQVWMHDLLQ 330

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
            +G++IV+ +SPEE G+RSRLW  E+VC  L ++TG E +E I LD    ++  +   + 
Sbjct: 331 IMGKEIVRCESPEEPGRRSRLWTYEDVCLALMDNTGKEKIEAIFLDMPGIKDAQW---NM 387

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           +AFSKM+ LRLLKI N+QL  G E LSN+LR L W  YP K LP+ LQ+D+ +E++M  S
Sbjct: 388 EAFSKMSKLRLLKINNVQLSEGPEDLSNKLRFLEWYSYPSKSLPAGLQVDELVELHMANS 447

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
            + +LW G K    LK++ LS+S NL R PD TG PNLE LILEGCT L E+HPSL  H 
Sbjct: 448 NLDQLWYGCKSALNLKIINLSYSLNLSRTPDLTGIPNLESLILEGCTSLSEVHPSLGSHK 507

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
            L  +N+ +C S+  LP  + M+SL+                + TLD  G LK  +FP++
Sbjct: 508 NLQYVNLVNCKSIRILPSNLEMESLK----------------VFTLD--GCLKLEKFPDV 549

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
           V +M  L  L L+ T I  L  SI  L GL LL++ +C++L+ +P ++S LK L+ L LS
Sbjct: 550 VRNMNCLMVLRLDETGITKLSSSIRHLIGLGLLSMNSCKNLKSIPSSISCLKSLKKLDLS 609

Query: 600 GCSKLKKFPEIVRSMKDLSELFLDGTS 626
           GCS+LK  P+ +  ++ L E   DG S
Sbjct: 610 GCSELKNIPKNLGKVESLEE--FDGLS 634



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 109/172 (63%), Gaps = 3/172 (1%)

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSL 580
           L  +++S  L     P++   + +L  L LEG T++  +  S+     L  +NL NC+S+
Sbjct: 462 LKIINLSYSLNLSRTPDLT-GIPNLESLILEGCTSLSEVHPSLGSHKNLQYVNLVNCKSI 520

Query: 581 EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
            ILP  +  ++ L+   L GC KL+KFP++VR+M  L  L LD T I ++ SSI  L  L
Sbjct: 521 RILPSNLE-MESLKVFTLDGCLKLEKFPDVVRNMNCLMVLRLDETGITKLSSSIRHLIGL 579

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD 692
            LL+++ CKNL  +PSSI  LKSLK L+LSGC +L+N+P+ LG++ESLEE D
Sbjct: 580 GLLSMNSCKNLKSIPSSISCLKSLKKLDLSGCSELKNIPKNLGKVESLEEFD 631



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 121/266 (45%), Gaps = 48/266 (18%)

Query: 614 MKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCF 673
           + +L EL +  +++ ++    +    L+++NLS   NL R P  +  + +L++L L GC 
Sbjct: 436 VDELVELHMANSNLDQLWYGCKSALNLKIINLSYSLNLSRTPD-LTGIPNLESLILEGCT 494

Query: 674 KLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKL 733
            L  V  +LG  ++L+ +++                     KS+ + LPS   + SL+  
Sbjct: 495 SLSEVHPSLGSHKNLQYVNLVNC------------------KSIRI-LPSNLEMESLKVF 535

Query: 734 NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
            L  C  +E   P  + N+  L  L L +     L +SI HL  L  + +  CK L+S+P
Sbjct: 536 TLDGCLKLE-KFPDVVRNMNCLMVLRLDETGITKLSSSIRHLIGLGLLSMNSCKNLKSIP 594

Query: 794 Q---LPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYL 850
                  +++++ ++GC+ L          K+    +  ++SL              E  
Sbjct: 595 SSISCLKSLKKLDLSGCSEL----------KNIPKNLGKVESL--------------EEF 630

Query: 851 EAVSNTRQHLSVVVPGSEIPEWFMYQ 876
           + +SN R    +VVPG+EIP WF ++
Sbjct: 631 DGLSNPRPGFGIVVPGNEIPGWFNHR 656


>gi|359495289|ref|XP_002276927.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1133

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 310/702 (44%), Positives = 421/702 (59%), Gaps = 46/702 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++S   +++ L+ + S DVRM+GI GMGG+GKTT+AR VY+ ISH+FEA  FL+NV +  
Sbjct: 224 IESSIREIKSLLFTESLDVRMVGIWGMGGIGKTTLARAVYNQISHQFEACCFLENVSDYL 283

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            K   +SLQ++ LSQLL+  + +      G   + + L  KKVL+VIDDV + K L+ L 
Sbjct: 284 EKQDFLSLQKKYLSQLLEDENLNT----KGCISIKALLCSKKVLIVIDDVNNSKILEDLI 339

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G   WFG GSRIIIT+R++ LL THGV+EVY+   LN D A++LF+  AFK   P+ + V
Sbjct: 340 GKHGWFGIGSRIIITTRNKQLLVTHGVNEVYQAEKLNDDNAVELFSRYAFKKAHPIDDYV 399

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS  I+ YA GLPLAL VLGSFL  +S  +W S L++L+  P  EI D+L++SFDGL++
Sbjct: 400 ELSQCIVVYAQGLPLALRVLGSFLFDKSKRQWESQLDKLKKIPKKEIQDVLRVSFDGLED 459

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            E+ IFLDIACFF+G+D+DYV      CGF P IGIRVLIEK LI+V  N L MH+LLQ+
Sbjct: 460 NERDIFLDIACFFQGHDKDYVMEIFRSCGFFPDIGIRVLIEKSLISVVENKLMMHNLLQK 519

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G++IV+  SP+E GKRSRLW  ++V HVLT+ TGTE VEGI LD      E+    + +
Sbjct: 520 MGREIVREASPKEPGKRSRLWIHDDVNHVLTKKTGTEEVEGISLD-LSSLKEINF--TNE 576

Query: 361 AFSKMTNLRLLKI-------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
           AF+ M  LRLLK+             C +    G ++    LR L W  YPLK LP++  
Sbjct: 577 AFAPMNRLRLLKVYTLNFLMDSKREKCKVHFSRGFKFHCEELRHLYWYEYPLKSLPNDFN 636

Query: 408 MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
           +   +++ M YS+I +LWKG K L+ LK M L HS+ L   PDF+   NLE+L+L+GC  
Sbjct: 637 LKNLVDLSMPYSQIKQLWKGTKVLENLKFMNLKHSKFLTETPDFSRVTNLERLVLKGCIS 696

Query: 468 LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDV 527
           LY++HPSL   NKL  L++K+C                   LKSLP+ I  LKCL    +
Sbjct: 697 LYKVHPSLGDLNKLNFLSLKNCKM-----------------LKSLPSCICDLKCLEVFIL 739

Query: 528 SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
           SG  KF E PE   ++E L E   +GTAIR LP S  LL  L +L+ + C+     P + 
Sbjct: 740 SGCSKFEELPENFGNLEMLKEFCADGTAIRVLPSSFSLLRNLEILSFERCKG---PPPST 796

Query: 588 SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLS 646
           S     RS   S                 LS   + DG ++     S+  L+ LE L+LS
Sbjct: 797 SWWLPRRSSNFSNFVLSPLSSLSSLKTLSLSACNISDGATL----DSLGFLSSLEDLDLS 852

Query: 647 DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
           +  N V LPS+I  L  LK L L  C +L+ +PE    I S+
Sbjct: 853 E-NNFVTLPSNISRLPHLKMLGLENCKRLQALPELPTSIRSI 893



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 154/509 (30%), Positives = 237/509 (46%), Gaps = 71/509 (13%)

Query: 542  HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
            H E L  L+     ++ LP    L   LV L++   +  ++   T   L+ L+ + L   
Sbjct: 614  HCEELRHLYWYEYPLKSLPNDFNL-KNLVDLSMPYSQIKQLWKGT-KVLENLKFMNLKHS 671

Query: 602  SKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
              L + P+  R + +L  L L G  S+ +V  S+  L KL  L+L +CK L  LPS I  
Sbjct: 672  KFLTETPDFSR-VTNLERLVLKGCISLYKVHPSLGDLNKLNFLSLKNCKMLKSLPSCICD 730

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYIPINLMRKSV 717
            LK L+   LSGC K E +PE  G +E L+E    GTA+   P S S    + I L  +  
Sbjct: 731  LKCLEVFILSGCSKFEELPENFGNLEMLKEFCADGTAIRVLPSSFSLLRNLEI-LSFERC 789

Query: 718  ALKLPSLSGLCSLRKLNLTD-------------------CNLMEGALPSDIGNLCSLKEL 758
                PS S     R  N ++                   CN+ +GA    +G L SL++L
Sbjct: 790  KGPPPSTSWWLPRRSSNFSNFVLSPLSSLSSLKTLSLSACNISDGATLDSLGFLSSLEDL 849

Query: 759  YLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALK 818
             LS+N+FV+LP++I+ L  L  + LE+CKRLQ+LP+LP +IR +    C SL T+     
Sbjct: 850  DLSENNFVTLPSNISRLPHLKMLGLENCKRLQALPELPTSIRSIMARNCTSLETI----- 904

Query: 819  LCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNE 878
               S+ +  + L +++L   + +   + R+ L   +     LS VV GS IP+W  YQ+ 
Sbjct: 905  ---SNQSFSSLLMTVRL--KEHIYCPINRDGLLVPA-----LSAVVFGSRIPDWIRYQSS 954

Query: 879  GSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGH------- 931
            GS +    P N ++    +G A+C V  V +     + FG +     +C + +       
Sbjct: 955  GSEVKAELPPNWFDSN-FLGLALCVV-TVPRLVSLADFFGLF---WRSCTLFYSTSSHAS 1009

Query: 932  ---GIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLG 988
                +Y      K G+  SDHLWL+Y          +PL   +   +  H+  SF     
Sbjct: 1010 SSFDVYTYPNHLK-GKVESDHLWLVY----------VPLPHFINWQQVTHIKASFRITTF 1058

Query: 989  QGLEV-KMCGLHPVYMDEVEELDQTTNQP 1016
              L V K CG+  VY++  EEL+ +   P
Sbjct: 1059 MRLNVIKECGIGLVYVN--EELNYSPFSP 1085


>gi|332330339|gb|AEE43925.1| TIR-NBS-LRR resistance protein muRdr1A [Rosa multiflora]
          Length = 1119

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 310/694 (44%), Positives = 437/694 (62%), Gaps = 21/694 (3%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MDS+ E++  L+D  ++DVR IGI GMGG+GKTT AR+VY  ISH+FE   FL NVR++S
Sbjct: 199 MDSKLEEIDVLLDKEANDVRFIGIWGMGGIGKTTFARLVYQKISHQFEVCIFLANVRQVS 258

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +  GLV LQ Q+LSQ+LK  ++ +W+V+ GI M+      K VLLV+DDV   +QL+ LA
Sbjct: 259 ATHGLVCLQNQILSQILKEGNDHVWDVYSGITMIKRCFCNKAVLLVLDDVDQSEQLEHLA 318

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G ++ FG  SRIIIT+RD H+L TH +++ Y+   L  DEALQLF+ KAF+ ++P ++  
Sbjct: 319 GEKDCFGLRSRIIITTRDRHVLVTHDIEKPYELKTLGEDEALQLFSWKAFRKHEPEEDYA 378

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           + S   +RYAGGLPLAL++LGSFL  RS+D W S  + L+  P  ++ +IL+ISFDGL E
Sbjct: 379 KQSKNFVRYAGGLPLALKILGSFLYKRSLDSWSSAFQELKQTPNPKVFEILKISFDGLHE 438

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQ 299
           +EKKIFLDIACF +    + +        F   I I VL+EK L+T+   N ++MHDL+Q
Sbjct: 439 MEKKIFLDIACFPRLYGNESMIEQAYSSEFFSRIAIEVLVEKSLLTISFGNHVYMHDLIQ 498

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G++IV RQ  EE G RSRLW   ++ HV TE+TGTE+ E I L   H +       + 
Sbjct: 499 EMGRRIV-RQENEEPGGRSRLWLRNDIFHVFTENTGTEVTESIFL---HLDKLEEADWNL 554

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           +AFSKM  LRLL I NL+L  G +YL N LR L W  YP K+LP   +  +  E+ + YS
Sbjct: 555 EAFSKMCKLRLLYIHNLRLSLGPKYLPNALRFLKWSWYPSKYLPPGFEPAELAELSLPYS 614

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
            I  LW GIK+L KLK + LS+S NL R PDFTG PNLEKLILEGCT L EIHPS+ L  
Sbjct: 615 NIDHLWNGIKYLGKLKSIDLSYSINLRRTPDFTGIPNLEKLILEGCTNLVEIHPSIALLK 674

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKF 533
           +L I N+++CTS+ +LP ++ M+ LE  +      LK +P  +   K LS   + G    
Sbjct: 675 RLRIWNLRNCTSIKSLPSEVNMEFLETFDVSGCSKLKMIPEFVGQTKRLSKFCLGGT-AV 733

Query: 534 REFPEIVEHM-EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPV-----TV 587
            + P  +E + E L EL L GT IR  P S+ L   L++ +  + R     P+     ++
Sbjct: 734 EKLPSSIELLPESLVELDLNGTVIREQPHSLFLKQNLIVSSFGSFRRKSPQPLIPLIASL 793

Query: 588 SNLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLS 646
            +L  L +LKL+ C+  + + P  + S+  L +L L G +   +P+SI LL+KL  +N+ 
Sbjct: 794 KHLSFLTTLKLNDCNLCEGEIPNDIGSLSSLEKLELRGNNFVSLPASIHLLSKLYFINVE 853

Query: 647 DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
           +CK L +LP  + A +SL+ +  + C  L+  P+
Sbjct: 854 NCKRLQQLP-ELPARQSLR-VTTNNCTSLQVFPD 885



 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 127/362 (35%), Positives = 196/362 (54%), Gaps = 57/362 (15%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
           L+S+ LS    L++ P+    + +L +L L+G T++ E+  SI LL +L + NL +C ++
Sbjct: 629 LKSIDLSYSINLRRTPDFT-GIPNLEKLILEGCTNLVEIHPSIALLKRLRIWNLRNCTSI 687

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI------------------------ES 687
             LPS +  ++ L+T ++SGC KL+ +PE +GQ                         ES
Sbjct: 688 KSLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQTKRLSKFCLGGTAVEKLPSSIELLPES 746

Query: 688 LEELDISGTAV---PHSTSWYSYIPINLM--------RKSVALKLP---SLSGLCSLRKL 733
           L ELD++GT +   PHS     ++  NL+        RKS    +P   SL  L  L  L
Sbjct: 747 LVELDLNGTVIREQPHSL----FLKQNLIVSSFGSFRRKSPQPLIPLIASLKHLSFLTTL 802

Query: 734 NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
            L DCNL EG +P+DIG+L SL++L L  N+FVSLP SI  LSKL  I +E+CKRLQ LP
Sbjct: 803 KLNDCNLCEGEIPNDIGSLSSLEKLELRGNNFVSLPASIHLLSKLYFINVENCKRLQQLP 862

Query: 794 QLPPNIR-QVRVNGCASLVTLLDAL------KLCKSDSTMIACLDSLKLLGNKSLA---F 843
           +LP     +V  N C SL    D         L    +  +  ++ L  +GN+  +   +
Sbjct: 863 ELPARQSLRVTTNNCTSLQVFPDPQVFPEPPNLSTPWNFSLISVNCLSAVGNQDASYFIY 922

Query: 844 SMLREYLEAVSN-TRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
           S+L+ ++E  ++ + +    ++PGSEIP+WF  Q+ G S+T   PS+  N  K +G+A+C
Sbjct: 923 SVLKRWIEQGNHRSFEFFKYIIPGSEIPDWFNNQSVGDSVTEKLPSDECN-SKWIGFAVC 981

Query: 903 CV 904
            +
Sbjct: 982 AL 983


>gi|147802252|emb|CAN68265.1| hypothetical protein VITISV_020931 [Vitis vinifera]
          Length = 1441

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 346/903 (38%), Positives = 511/903 (56%), Gaps = 82/903 (9%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MD R ++L+ L++    D+RM+GI G  G+GKTT+A++VY+ I  +F    FL++V+  S
Sbjct: 212  MDFRLKELKSLLNVHLDDIRMVGIYGPSGIGKTTMAKMVYNDILCQFNGGIFLEDVKSRS 271

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
                   L + LL  +L   +  + N+ DGI+ +  RL  KKV +VIDDV D +Q++SL 
Sbjct: 272  R----FQLLQDLLRGILVGENVELNNINDGINKIKGRLGSKKVFVVIDDVDDSEQVKSLV 327

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
             + +WFG GSRII+T+R +HLL  +GVDE Y+   L  ++A+QLF+  AFK   P ++ V
Sbjct: 328  KSCKWFGLGSRIILTTRYKHLLDVYGVDESYEAKVLCNEDAIQLFSWHAFKQNTPKEDYV 387

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
             +S  ++ Y  GLPLA++VLGSFL G ++DEW+STL +L  E   EI ++L+I +DGL +
Sbjct: 388  DMSNLMVNYVQGLPLAIKVLGSFLYGMTIDEWKSTLGKLTKE-DQEIYNVLKICYDGLDD 446

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             EK+I LDIACFFKG D+D+V   L+ C F+  IG+RVL ++CLI++ NN + MHDL+Q+
Sbjct: 447  NEKEILLDIACFFKGEDKDFVLRILKSCDFYAEIGVRVLCDRCLISISNNRISMHDLIQQ 506

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G  +V+ +SPE+  K SRLW  + + H      G++ +E I  D      E+    + K
Sbjct: 507  MGWTVVREKSPEDPSKWSRLWDPDNIRHAFLGEKGSKNIEVISCD-LSRSKEIQ--CNTK 563

Query: 361  AFSKMTNLRLLKI-----C-NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
             F+KM  LRLLK+     C  + LP   E+ S  LR L W GYPLK LPSN   +  +E+
Sbjct: 564  VFTKMKRLRLLKLHWSDHCGKVVLPPNFEFPSQELRYLHWEGYPLKTLPSNFHGENLVEL 623

Query: 415  YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
            ++  S I +LWK  K L+KLKV+ LS+S+ L +MP F+  P LE L LEGC  L ++H S
Sbjct: 624  HLRKSTIKQLWKRSKGLEKLKVIDLSYSKVLTKMPKFSRMPKLEILNLEGCISLRKLHSS 683

Query: 475  LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNL------------------------- 509
            +     L  LN+  C  L +LP  +  +SLE L+L                         
Sbjct: 684  IGDVKMLTYLNLGGCEKLQSLPSSMKFESLEVLHLNGCRNFTNFPEVHENMKHLKELYLQ 743

Query: 510  ----KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIEL 565
                + LP++I  L  L  LD+S    F++FPEI  +M+ L EL L GT I+ LP SI  
Sbjct: 744  KSAIEELPSSIGSLTSLEILDLSECSNFKKFPEIHGNMKFLRELRLNGTGIKELPSSIGD 803

Query: 566  LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG-----------------------CS 602
            L+ L +LBL  C + E  P    N+K LR L L+G                       CS
Sbjct: 804  LTSLEILBLSECSNFEKFPGIHGNMKFLRELHLNGTRIKELPSSIGSLTSLEILNLSKCS 863

Query: 603  KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
            K +KFP+I  +M+ L +L+L  + IKE+PS+I  L  L+ L+L D   +  LP SI +L+
Sbjct: 864  KFEKFPDIFANMEHLRKLYLSNSGIKELPSNIGNLKHLKELSL-DKTFIKELPKSIWSLE 922

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYI-PINLMRKSVA 718
            +L+TL+L GC   E  PE    + SL +L+I  TA+   P S    + +  +NL      
Sbjct: 923  ALQTLSLRGCSNFEKFPEIQRNMGSLLDLEIEETAITELPLSIGHLTRLNSLNLENCKNL 982

Query: 719  LKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSK 777
              LP S+  L SL+ L+L  C+ +E A P  + ++  L+ L L   +   LP+SI HL  
Sbjct: 983  RSLPSSICRLKSLKHLSLNCCSNLE-AFPEILEDMEHLRSLELRGTAITGLPSSIEHLRS 1041

Query: 778  LLNIELEDCKRLQSLPQLPPN---IRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLK 834
            L  ++L +C  L++LP    N   +  + V  C+ L  L D L+      ++  CL +L 
Sbjct: 1042 LQWLKLINCYNLEALPNSIGNLTCLTTLVVRNCSKLHNLPDNLR------SLQCCLTTLD 1095

Query: 835  LLG 837
            L G
Sbjct: 1096 LGG 1098



 Score =  206 bits (524), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 173/552 (31%), Positives = 252/552 (45%), Gaps = 100/552 (18%)

Query: 413  EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPN-LEKLILEGCTRLYEI 471
            E+ +  + I EL   I  L  L+++ LS   N  + P   G    L +L L G TR+ E+
Sbjct: 786  ELRLNGTGIKELPSSIGDLTSLEILBLSECSNFEKFPGIHGNMKFLRELHLNG-TRIKEL 844

Query: 472  HPSLLLHNKLIILNMKDCTSLITLPG---------KILMK-------------------- 502
              S+     L ILN+  C+     P          K+ +                     
Sbjct: 845  PSSIGSLTSLEILNLSKCSKFEKFPDIFANMEHLRKLYLSNSGIKELPSNIGNLKHLKEL 904

Query: 503  SLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLS 562
            SL+K  +K LP +I  L+ L TL + G   F +FPEI  +M  L +L +E TAI  LPLS
Sbjct: 905  SLDKTFIKELPKSIWSLEALQTLSLRGCSNFEKFPEIQRNMGSLLDLEIEETAITELPLS 964

Query: 563  IELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL 622
            I  L+ L  LNL+NC++L  LP ++  LK L+ L L+ CS L+ FPEI+  M+ L  L L
Sbjct: 965  IGHLTRLNSLNLENCKNLRSLPSSICRLKSLKHLSLNCCSNLEAFPEILEDMEHLRSLEL 1024

Query: 623  DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
             GT+I  +PSSIE L  L+ L L +C NL  LP+SI  L  L TL +  C KL N+P+ L
Sbjct: 1025 RGTAITGLPSSIEHLRSLQWLKLINCYNLEALPNSIGNLTCLTTLVVRNCSKLHNLPDNL 1084

Query: 683  GQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLME 742
              ++                                         C L  L+L  CNLME
Sbjct: 1085 RSLQ-----------------------------------------CCLTTLDLGGCNLME 1103

Query: 743  GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
            G +P DI  L SL+ L +S+N    +P  I  L KL  + +  C  L+ +P LP ++R++
Sbjct: 1104 GGIPRDIWGLSSLEFLDVSENHIRCIPIGIIQLLKLTTLRMNHCLMLEDIPDLPSSLRRI 1163

Query: 803  RVNGCASLVTLLDALKLCKSD-----STMIACLDSLKLLGNK---------SLAFSMLRE 848
              +GC  L TL   + +  S       ++I   DS  +   +          LA      
Sbjct: 1164 EAHGCRCLETLSSPIHVLWSSLLNCFKSLIQAHDSHDVQNEEEDSHKQQDIDLALPTSSG 1223

Query: 849  YLEAV-----SNTRQ------HLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKL 896
             L+        N+ +       + V +PGS  IPEW  +QN+G  + +  P N Y     
Sbjct: 1224 NLDEEEDLYGGNSDEEDGPLGQIDVFIPGSSGIPEWVSHQNKGCEVRIELPMNWYEDNDF 1283

Query: 897  VGYAICCVFHVL 908
            +G+A+   FH+L
Sbjct: 1284 LGFAL--FFHLL 1293


>gi|105922631|gb|ABF81427.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1336

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 360/981 (36%), Positives = 516/981 (52%), Gaps = 178/981 (18%)

Query: 32   KTTIARVVYDLISHEFEASGFLDNVREI-SSKGGLVSLQRQLLSQLLKLADNSIWNVFDG 90
            KTT+ARV+YD I  +FE S FL NVRE+ + KGG   LQ QLLS++L +   S+ + + G
Sbjct: 204  KTTVARVLYDKIRWQFEGSYFLANVREVFAEKGGPRRLQEQLLSEIL-MECASLKDSYRG 262

Query: 91   IDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEV 150
            I+M+  RL+ KK+LL++DDV D KQL+ LA    WFG GSRIIITSRD ++   +   ++
Sbjct: 263  IEMIKRRLRLKKILLILDDVDDKKQLEFLAAEPGWFGPGSRIIITSRDTNVFTGNDDTKI 322

Query: 151  YKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVD 210
            Y+   LN D+AL LFN KAFK  QP ++ V+LS +++ YA GLPLALEV+          
Sbjct: 323  YEAEKLNDDDALMLFNQKAFKNDQPTEDFVKLSKQVVGYANGLPLALEVI---------- 372

Query: 211  EWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGF 270
                                                 DIACF KG ++D +   L+ CGF
Sbjct: 373  -------------------------------------DIACFLKGFEKDRIIRILDSCGF 395

Query: 271  HPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVL 330
            H  IG +VLIE+ LI+V+ + +WMHDLLQ +G++IV+ +S EE G+RSRLW  E+V   L
Sbjct: 396  HAHIGTQVLIERSLISVYRDQVWMHDLLQIMGKEIVRSESSEEPGRRSRLWTFEDVRLAL 455

Query: 331  TESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLR 390
             ++TG E +E I LD    +   +   + +AFSKM+ LRLLKI N+QL  G E LSN+LR
Sbjct: 456  MDNTGKEKIEAIFLDMPEIKEAQW---NMEAFSKMSRLRLLKIDNVQLSEGPEDLSNKLR 512

Query: 391  LLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD 450
             L W  YP K LP+ LQ+D+ +E++M  S I +LW G K    LK++ LS+S NL + PD
Sbjct: 513  FLEWHSYPSKSLPAGLQVDELVELHMANSSIEQLWYGCKSAVNLKIINLSNSLNLSKTPD 572

Query: 451  FTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK 510
             TG PNLE LILEGCT L ++HPSL  H KL  +N+ +C S+  LP  + M+SL+     
Sbjct: 573  LTGIPNLESLILEGCTSLSKVHPSLAHHKKLQYMNLVNCKSIRILPNNLEMESLK----- 627

Query: 511  SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLV 570
                       + TLD  G  K  +FP+IV +M  L EL L+GT +  L  SI  L  L 
Sbjct: 628  -----------VFTLD--GCSKLEKFPDIVGNMNCLMELRLDGTGVEELSSSIHHLISLE 674

Query: 571  LLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEV 630
            +L++ NC++LE +P ++  LK L+ L LSGCS+LK   ++  S     E    GTSI++ 
Sbjct: 675  VLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKNLEKVESS----EEFDASGTSIRQP 730

Query: 631  PSSIELLTKLELLNLSDCKNLV------RLPSSIIALKSLKTLNLSGCFKLENVPETLGQ 684
            P+ I LL  L++L+   CK +       RLP S+  L SL+ L+L  C            
Sbjct: 731  PAPIFLLKNLKVLSFDGCKRIAVSLTDQRLP-SLSGLCSLEVLDLCAC------------ 777

Query: 685  IESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEG 743
                   ++   A+P      S +    + ++  + LP S++ L  L  L L DC ++E 
Sbjct: 778  -------NLREGALPEDIGCLSSLKSLDLSRNNFVSLPRSVNQLSGLEMLVLEDCRMLE- 829

Query: 744  ALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR 803
                                   SLP                        ++P  ++ V 
Sbjct: 830  -----------------------SLP------------------------EVPSKVQTVN 842

Query: 804  VNGCASLVTLLDALKLCKSDSTMIACLDSLKLL---GNKSLAFSMLREYLEAVSNTRQHL 860
            +NGC SL  + D +KL  S  +   CL+  +L    G  S+  +ML  YL+ +SN R   
Sbjct: 843  LNGCTSLKEIPDPIKLSSSKISEFLCLNCWELYEHNGQDSMGLTMLERYLQGLSNPRPGF 902

Query: 861  SVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSY 920
             + VPG+EIP WF +Q++GSSI+V  PS        +G+  C  F         + +G  
Sbjct: 903  GIAVPGNEIPGWFNHQSKGSSISVQVPS------WSMGFVACVAF---------SAYGER 947

Query: 921  PTHQLNCHI---GHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESN 977
            P   L C     G   Y         Q  SDH+WL YLS     +++   E   E F  +
Sbjct: 948  PF--LRCDFKANGRENYPSLMCINSIQVLSDHIWLFYLSFDYLKELK---EWQNESF--S 1000

Query: 978  HVNVSFEPWLGQGLEVKMCGL 998
            ++ +SF  +  + ++VK CG+
Sbjct: 1001 NIELSFHSY-ERRVKVKNCGV 1020


>gi|332330345|gb|AEE43931.1| TIR-NBS-LRR resistance protein muRdr1G [Rosa multiflora]
          Length = 1141

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 305/708 (43%), Positives = 425/708 (60%), Gaps = 59/708 (8%)

Query: 4   RCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKG 63
           + E++  L+D  +SDVR IGI GMGGLGKTT+AR+VY+ ISH+FE   FL NVRE+S+  
Sbjct: 201 KLEEIDVLLDIEASDVRFIGIWGMGGLGKTTLARLVYEKISHQFEVCVFLTNVREVSATH 260

Query: 64  GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNR 123
           GLV LQ+Q+LS +LK  +  +WNV+ GI M+      K V+LV+DDV   +QL+ LAG +
Sbjct: 261 GLVYLQKQILSHILKEENAQVWNVYSGITMIKRCFCNKAVILVLDDVDQSEQLEHLAGEK 320

Query: 124 EWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLS 183
           +WFG  SRII T+R++ +L THGV++ Y+  GLN  EALQLF+ KAF+  +P ++  +L 
Sbjct: 321 DWFGLRSRIIFTTRNQRVLVTHGVEKPYELKGLNNAEALQLFSWKAFRKCEPEEDYAELC 380

Query: 184 ARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEK 243
              + +AGGLPLAL+ LGSFL  RS D W S L +L   P   + D+L++S+DGL E+EK
Sbjct: 381 KSFVMHAGGLPLALKTLGSFLYKRSPDAWNSALAKLRNTPDKTVFDMLKVSYDGLDEMEK 440

Query: 244 KIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELG 302
           KIFLDIACF       ++   L        I I VL+E+ L+T+  NN + MHDL++E+G
Sbjct: 441 KIFLDIACFSSQCQAKFIIELLYSYDVCIGIAIEVLVERSLLTISSNNEIGMHDLIREMG 500

Query: 303 QQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAF 362
            +IV++QSPEE G  SRLW   ++ HV T++TGTE +EGI L  +  E   +   + +AF
Sbjct: 501 CEIVRQQSPEEPGGCSRLWLRNDIFHVFTKNTGTEAIEGIFLHLHKLEEADW---NPEAF 557

Query: 363 SKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIG 422
           SKM NL+LL I NL+L  G ++L + LR+L W  YP K LP   Q D   E+   +S I 
Sbjct: 558 SKMCNLKLLYIHNLRLSLGPKFLPDALRILKWSWYPSKSLPPGFQPD---ELSFVHSNID 614

Query: 423 ELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLI 482
            LW GI  L  LK ++LS+S NLIR PDFTG PNLEKL+LEGCT L +IHPS+ L  +L 
Sbjct: 615 HLWNGI--LGHLKSIVLSYSINLIRTPDFTGIPNLEKLVLEGCTNLVKIHPSIALLKRLK 672

Query: 483 ILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEH 542
           I N ++C S+ TLP ++ M+ LE                  T DVSG  K +  PE V  
Sbjct: 673 IWNFRNCKSIKTLPSEVNMEFLE------------------TFDVSGCSKLKMIPEFVGQ 714

Query: 543 MEHLSELHLEGTAIRGLPLSIELLS-GLVLLNLKN-----------------CRSLEILP 584
            + LS+L L GTA+  LP SIE LS  LV L+L                     SL + P
Sbjct: 715 TKRLSKLCLGGTAVEKLPSSIEHLSESLVGLDLSGIVIREQPYSLFLKQNVIASSLGLFP 774

Query: 585 -----------VTVSNLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPS 632
                       ++ +   L+ L L+ C+  + + P  + S+  L  L L G +   +P+
Sbjct: 775 RKSHHPLIPVLASLKHFSSLKELNLNDCNLCEGEIPNDIGSLSSLECLELGGNNFVSLPA 834

Query: 633 SIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
           SI LL +L  +N+ +CK L +LP   ++  SL+   ++ C  L+  PE
Sbjct: 835 SIHLLCRLGSINVENCKRLQQLPELPVS-GSLRVTTVN-CTSLQVFPE 880



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 167/540 (30%), Positives = 258/540 (47%), Gaps = 101/540 (18%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
            L+S+ LS    L + P+    + +L +L L+G T++ ++  SI LL +L++ N  +CK++
Sbjct: 624  LKSIVLSYSINLIRTPDFT-GIPNLEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNCKSI 682

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYS-- 706
              LPS +  ++ L+T ++SGC KL+ +PE +GQ + L +L + GTAV   P S    S  
Sbjct: 683  KTLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQTKRLSKLCLGGTAVEKLPSSIEHLSES 741

Query: 707  ------------------YIPINLMRKSVAL-----------KLPSLSGLCSLRKLNLTD 737
                              ++  N++  S+ L            L SL    SL++LNL D
Sbjct: 742  LVGLDLSGIVIREQPYSLFLKQNVIASSLGLFPRKSHHPLIPVLASLKHFSSLKELNLND 801

Query: 738  CNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP- 796
            CNL EG +P+DIG+L SL+ L L  N+FVSLP SI  L +L +I +E+CKRLQ LP+LP 
Sbjct: 802  CNLCEGEIPNDIGSLSSLECLELGGNNFVSLPASIHLLCRLGSINVENCKRLQQLPELPV 861

Query: 797  -PNIRQVRVNGCASLVTLLD-ALKLCKSDSTMIACLDSLKLLGNKSLAF---SMLREYLE 851
              ++R   VN C SL    +    LC+  +  +  ++ L  +GN+  +F   S++   LE
Sbjct: 862  SGSLRVTTVN-CTSLQVFPELPPDLCRLSAFSLNSVNCLSTIGNQDASFFLYSVINRLLE 920

Query: 852  AVSN----------------------TRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSN 889
             +S                       + + L+ ++PGSEIPEWF  Q+ G S+T   P +
Sbjct: 921  VISLSLSLSLSLSLSLSLSRSLETHLSFEFLNFLIPGSEIPEWFNNQSAGDSVTEKLPWD 980

Query: 890  LYNKKKLVGYAICCVFHVLKNSRG---------NNCFGS--YPTHQLNCHIGHGIYGIGF 938
              N  K +G+A+C +     N            + C  S  +  + +N  +G G+     
Sbjct: 981  ACN-SKWIGFAVCALIVPQDNPSAVPEDPDLDPDTCLISCNWSNYGINGVVGRGLC---- 1035

Query: 939  RDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQG----LEVK 994
                 Q  SDHLWLL L          P     +P     VN  F+     G    ++VK
Sbjct: 1036 ---VRQFDSDHLWLLVLPS--------PFR---KPKNCREVNFVFQTARAVGNNRCMKVK 1081

Query: 995  MCGLHPVYMDEVEELDQTTNQPSRFTVYNLNEFDQHFVGSKMIVATT-SKRSLTEYFGAE 1053
             CG+  +Y  + EEL    NQ    +V    E      G+ +  AT+ S  S  EY+ AE
Sbjct: 1082 KCGVRALYEQDTEELISKMNQSKSSSVSLYEEAMDEQEGAMVKAATSGSGGSGNEYYPAE 1141


>gi|399920218|gb|AFP55565.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1024

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 307/699 (43%), Positives = 438/699 (62%), Gaps = 23/699 (3%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD++ E++  L+D  ++DVR IGI GMGG+GKT++A +VY+ ISHEF+   FLD+VR+ S
Sbjct: 148 MDAKMEEIDVLLDKEANDVRFIGIWGMGGIGKTSLATLVYEKISHEFDVCIFLDDVRKAS 207

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +  GLV LQ+Q+LSQLL   +  +WNV  GI M+   +  K VL V+D+V   +QL++L 
Sbjct: 208 ADHGLVYLQKQILSQLLTEENVLVWNVNGGITMIKRCVCNKAVLPVLDNVDQSEQLENLV 267

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G+++WFG  SRIIIT+R+ H+L THG++E Y+  GLN  EALQLF++KAF  Y+P ++  
Sbjct: 268 GDKDWFGLRSRIIITTRNRHVLVTHGIEEPYEVRGLNKAEALQLFSLKAFGKYEPDEDYA 327

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            LS R + + GGLPLAL+ LGSFL  R +D W S   +L+  P  ++ D+L++S+DGL E
Sbjct: 328 MLSHRFVNHVGGLPLALKTLGSFLCKRRLDAWNSEWAKLKNTPNEKVFDVLKVSYDGLDE 387

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQ 299
           ++KK FLDIACF    +  ++   L        I I VL+E+ L+T+  NN + MHDL++
Sbjct: 388 MQKKTFLDIACFSSQCEAKFIIELLYSYDVCTGIAIEVLVERSLLTISSNNEIGMHDLIR 447

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G +IV++QSPEE G RSRLW   ++ HV T++TGTE+ EGI L  Y  +   +   + 
Sbjct: 448 EMGCEIVRQQSPEEPGGRSRLWLRNDIFHVFTKNTGTEVTEGIFLHLYELQEADW---NP 504

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           KAFSKM NL+LL I NL+L  G ++L + LR+L W GYP K LP + Q D+  E+ + +S
Sbjct: 505 KAFSKMCNLKLLYIHNLRLSLGPKFLPDALRILKWSGYPSKSLPPDFQPDELTELSLVHS 564

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
            I  LW GIK L  LK + LS+S NL R P+FTG PNLEKL+LEGCT L EIHPS+ L  
Sbjct: 565 NIDHLWNGIKSLVNLKSIDLSYSRNLRRTPNFTGIPNLEKLVLEGCTNLVEIHPSIALLK 624

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKF 533
           +L I N ++C S+ +LP ++ M+ LE  +      LK +P  +  +K LS L ++G    
Sbjct: 625 RLKIWNFRNCKSIKSLPSEVNMEFLETFDVSGCSKLKIIPEFVGQMKRLSKLYLNGT-AV 683

Query: 534 REFPEIVEHM-EHLSELHLEGTAIRGLPLSIELLSGLV-----LLNLKNCRSLEILPVTV 587
            + P  +EH+ E L EL L G  IR  P S+ L   LV     L   K+   L  L  ++
Sbjct: 684 EKLPSSIEHLSESLVELDLSGIVIREQPYSLFLKQNLVVSSFGLFPRKSPHPLIPLLASL 743

Query: 588 SNLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLS 646
            +   L  LKL+ C+  +   P  + S+  L  L L G +   +P+SI LL+KL  +N+ 
Sbjct: 744 KHFSSLMQLKLNDCNLCEGDIPNDIGSLSSLRRLELRGNNFVSLPASIHLLSKLRYINVE 803

Query: 647 DCKNLVRLPS-SIIALKSLKTLNLSGCFKLENVPETLGQ 684
           +CK L +LP  S I + S +T N   C  L+  P  L Q
Sbjct: 804 NCKRLQQLPELSAIGVLS-RTDN---CTSLQLFPTGLRQ 838



 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 163/526 (30%), Positives = 236/526 (44%), Gaps = 130/526 (24%)

Query: 587  VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNL 645
            + +L  L+S+ LS    L++ P     + +L +L L+G T++ E+  SI LL +L++ N 
Sbjct: 573  IKSLVNLKSIDLSYSRNLRRTPNFT-GIPNLEKLVLEGCTNLVEIHPSIALLKRLKIWNF 631

Query: 646  SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHST 702
             +CK++  LPS +  ++ L+T ++SGC KL+ +PE +GQ++ L +L ++GTAV   P S 
Sbjct: 632  RNCKSIKSLPSEV-NMEFLETFDVSGCSKLKIIPEFVGQMKRLSKLYLNGTAVEKLPSSI 690

Query: 703  SWYS--------------------YIPINLMRKSVALK-----------LPSLSGLCSLR 731
               S                    ++  NL+  S  L            L SL    SL 
Sbjct: 691  EHLSESLVELDLSGIVIREQPYSLFLKQNLVVSSFGLFPRKSPHPLIPLLASLKHFSSLM 750

Query: 732  KLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQS 791
            +L L DCNL EG +P+DIG+L SL+ L L  N+FVSLP SI  LSKL  I +E+CKRLQ 
Sbjct: 751  QLKLNDCNLCEGDIPNDIGSLSSLRRLELRGNNFVSLPASIHLLSKLRYINVENCKRLQQ 810

Query: 792  LPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKS---LAFSMLRE 848
            LP+L       R + C SL      L+          C++ L ++GN+    L +S+L+ 
Sbjct: 811  LPELSAIGVLSRTDNCTSLQLFPTGLRQ--------NCVNCLSMVGNQDASYLLYSVLKR 862

Query: 849  YLEAVSNTRQHLS---VVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
            ++E     R+ L     V+PGSEIPEWF  Q+ G  +T          +KL+        
Sbjct: 863  WIEIQETHRRPLEFLWFVIPGSEIPEWFNNQSVGDRVT----------EKLL-------- 904

Query: 906  HVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRL 965
                    +NC G Y                       Q  SDHL LL L          
Sbjct: 905  --------SNCVGVY---------------------VKQIVSDHLCLLIL---------- 925

Query: 966  PLESNLEPFESN----HVNVSFEPWLGQG----LEVKMCGLHPVYMDEVEELDQTTNQPS 1017
                 L PF        VN  FE          ++VK CG+  +Y+ + EEL    NQ  
Sbjct: 926  -----LSPFRKPENCLEVNFVFEITRAVANNRCIKVKKCGVRALYVHDREELISKMNQSK 980

Query: 1018 RFTVYNLNEFDQHFVGSKMIVATTSKRSLTEYFGAEASGSGCCDDE 1063
              +  +L E         M+  T           A  SGSG  DDE
Sbjct: 981  SSSSISLYEEAMDEQEGAMVKTTQE---------AATSGSGGSDDE 1017


>gi|105922648|gb|ABF81428.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1246

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 306/627 (48%), Positives = 409/627 (65%), Gaps = 25/627 (3%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           +DSR E L   +     +   IGI GMGG+GKTT+ARVVYD    +FE S FL NVRE+ 
Sbjct: 249 IDSRLEVLNGYIGEEVGEAIFIGIYGMGGIGKTTVARVVYDRFRLQFEGSCFLANVREVF 308

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           + K G   LQ QLLS++L +   S+W+   GI+M+  RL+ KK+LL++DDV D +QL+ L
Sbjct: 309 AEKDGPCRLQEQLLSEIL-MERASVWDSSRGIEMIKRRLRLKKILLILDDVDDKEQLEFL 367

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           A  R WFG GSRIIITSRD+ +L  +GV  +Y+   LN D+AL LF+ KAFK  QP ++ 
Sbjct: 368 AEERGWFGPGSRIIITSRDKQVLTRNGVARIYEGEKLNDDDALMLFSQKAFKNDQPAEDF 427

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           + LS +++ YA GLPLALEV+GSFL GRS+ EWR  + R+   P  EI+ +L +SFDGL 
Sbjct: 428 LDLSKQVVGYASGLPLALEVIGSFLHGRSIPEWRGAINRMNEIPDREIIKVLLVSFDGLH 487

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           ELEKKIFLDIACF KG   D +T  L+G GFH  IGI VLIE+ LI+V  + +WMH+LLQ
Sbjct: 488 ELEKKIFLDIACFLKGFKIDRITRILDGRGFHASIGIPVLIERSLISVSRDQVWMHNLLQ 547

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           ++G++I++R+SPEE G+RSRLW  ++VC  L ++TG E VE I LD    +   +   + 
Sbjct: 548 KMGKEIIRRESPEEPGRRSRLWTYKDVCLALMDNTGKEKVEAIFLDMPGIKEARW---NM 604

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           KAFSKM+ LRLLKI N+QL  G E LSN LR L W  YP K LP+ LQ+D+ +E++M  S
Sbjct: 605 KAFSKMSRLRLLKIDNVQLFEGPEDLSNNLRFLEWHSYPSKSLPAGLQVDELVELHMANS 664

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
            + +LW G K    LK++ LS+S NL + PD TG PNL+ LILEGCT L E+HPSL  H 
Sbjct: 665 NLEQLWYGCKSAVNLKIINLSNSLNLSQTPDLTGIPNLKSLILEGCTSLSEVHPSLAHHK 724

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
           KL  +N+ +C S+  LP  + M+SLE                + TLD  G  K  +FP+I
Sbjct: 725 KLQHVNLVNCKSIRILPNNLEMESLE----------------VCTLD--GCSKLEKFPDI 766

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
             +M  L  L L+ T I  L  SI  L GL LL++ NC++L+ +P ++  LK L+ L LS
Sbjct: 767 AGNMNCLMVLRLDETGITKLSSSIHYLIGLGLLSMNNCKNLKSIPSSIGCLKSLKKLDLS 826

Query: 600 GCSKLKKFPEIVRSMKDLSELFLDGTS 626
           GCS+LK  PE +  ++ L E   DG S
Sbjct: 827 GCSELKYIPENLGKVESLEE--FDGLS 851



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/229 (37%), Positives = 129/229 (56%), Gaps = 17/229 (7%)

Query: 494 TLPGKILMKSLEKL-----NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSE 548
           +LP  + +  L +L     NL+ L         L  +++S  L   + P++   + +L  
Sbjct: 646 SLPAGLQVDELVELHMANSNLEQLWYGCKSAVNLKIINLSNSLNLSQTPDLT-GIPNLKS 704

Query: 549 LHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKF 607
           L LEG T++  +  S+     L  +NL NC+S+ ILP  +  ++ L    L GCSKL+KF
Sbjct: 705 LILEGCTSLSEVHPSLAHHKKLQHVNLVNCKSIRILPNNLE-MESLEVCTLDGCSKLEKF 763

Query: 608 PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL 667
           P+I  +M  L  L LD T I ++ SSI  L  L LL++++CKNL  +PSSI  LKSLK L
Sbjct: 764 PDIAGNMNCLMVLRLDETGITKLSSSIHYLIGLGLLSMNNCKNLKSIPSSIGCLKSLKKL 823

Query: 668 NLSGCFKLENVPETLGQIESLEELD-------ISGTAVPHST--SWYSY 707
           +LSGC +L+ +PE LG++ESLEE D         G AVP +    W+++
Sbjct: 824 DLSGCSELKYIPENLGKVESLEEFDGLSNPRTRFGIAVPGNEIPGWFNH 872



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 121/266 (45%), Gaps = 48/266 (18%)

Query: 614 MKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCF 673
           + +L EL +  ++++++    +    L+++NLS+  NL + P  +  + +LK+L L GC 
Sbjct: 653 VDELVELHMANSNLEQLWYGCKSAVNLKIINLSNSLNLSQTPD-LTGIPNLKSLILEGCT 711

Query: 674 KLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKL 733
            L  V  +L   + L+ +++                     KS+ + LP+   + SL   
Sbjct: 712 SLSEVHPSLAHHKKLQHVNLVNC------------------KSIRI-LPNNLEMESLEVC 752

Query: 734 NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
            L  C+ +E   P   GN+  L  L L +     L +SI +L  L  + + +CK L+S+P
Sbjct: 753 TLDGCSKLE-KFPDIAGNMNCLMVLRLDETGITKLSSSIHYLIGLGLLSMNNCKNLKSIP 811

Query: 794 Q---LPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYL 850
                  +++++ ++GC+ L  + + L            ++SL              E  
Sbjct: 812 SSIGCLKSLKKLDLSGCSELKYIPENL----------GKVESL--------------EEF 847

Query: 851 EAVSNTRQHLSVVVPGSEIPEWFMYQ 876
           + +SN R    + VPG+EIP WF +Q
Sbjct: 848 DGLSNPRTRFGIAVPGNEIPGWFNHQ 873


>gi|359493553|ref|XP_003634625.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1273

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 368/1059 (34%), Positives = 561/1059 (52%), Gaps = 148/1059 (13%)

Query: 16   SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI-SSKGGLVSLQRQLLS 74
            S+DVRM+GI G GG+GKTT+A+VV + I H++E + FL +VRE  +   GL++LQ+QLL 
Sbjct: 247  SNDVRMVGIYGCGGIGKTTLAKVVCNRIFHQYEGTIFLGSVREACADHRGLLNLQKQLLD 306

Query: 75   QLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIII 134
             L+   ++++ ++  G  M+ +    K+VL+++DD+ D+ QL+SL G++EWFG GSRIII
Sbjct: 307  ILVG-ENHNVSSLDQGKLMIKNTFNCKRVLIILDDIDDLSQLESLVGSKEWFGPGSRIII 365

Query: 135  TSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLP 194
            T+R++HLLK H +D+ Y+   L+ +++++LF+  AF+   P Q+   LS  I+ YA GLP
Sbjct: 366  TTRNKHLLKLHHLDDSYQMKELDVEDSIELFSWSAFRQNHPKQKYAYLSKCIVDYAKGLP 425

Query: 195  LALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFK 254
            LAL++LGS L  R++ EW S L +L+  P  EIL +L+ISFDGL   +K+IFLDIACFFK
Sbjct: 426  LALKILGSLLYERTILEWESELHKLKRIPNMEILHVLRISFDGLDREQKEIFLDIACFFK 485

Query: 255  GNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEEL 314
            G D D+V+  L+G       GIR L ++ LIT+ NN + MHDL+Q++G +IV+ + P + 
Sbjct: 486  GQDMDFVSRILDGYS-----GIRHLSDRSLITILNNKIHMHDLIQQMGWEIVREKYPRDP 540

Query: 315  GKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLK-I 373
             K SRLW+ E++        G E VE I +D      E+    +++ +++M  LRLL+ I
Sbjct: 541  NKWSRLWEPEDIYRAFIRKQGMENVEAIFMD-LSRMKEIQF--NSQVWAEMMKLRLLQII 597

Query: 374  CN-----------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIG 422
            CN           +  P   E+ S  L  L W  YPLK LPSN   +  IEI +  S I 
Sbjct: 598  CNDDEEFMKMESKVHFPEDFEFPSYELSYLLWERYPLKSLPSNFYGENLIEINLKKSNIR 657

Query: 423  ELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLI 482
            +LW+G K L KLKV+ L  S  L  + +F+  PNLE+L L  C  L +I  S+ +  KL 
Sbjct: 658  QLWQGNKCLGKLKVLNLQGSTQLDHISNFSTMPNLERLNLRLCGSLDKIDSSIGVLTKLT 717

Query: 483  ILNMKDCTSLITLPGKI-LMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVE 541
             L++ +C  L +LP  I  + SLE+L L++           S+L+     KF E      
Sbjct: 718  WLDLSNCKLLKSLPSSIQYLDSLEELYLRN----------CSSLE-----KFLEMERGC- 761

Query: 542  HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
             M+ L EL L+ TAI  L  SI  ++ L LL+L+ C++L+ LP  +  L+ L +L L  C
Sbjct: 762  -MKGLRELWLDNTAIEELSSSIVHITSLELLSLRICKNLKSLPSNICGLESLTTLDLRDC 820

Query: 602  SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
            S L+ FPEI+  M+ L  L L GT IK++ +  E L +L   +L  CKNL  LPS+I  L
Sbjct: 821  SNLETFPEIMEDMQHLESLNLRGTGIKQIAAPFEHLNQLLFFSLCFCKNLRSLPSNICRL 880

Query: 662  KSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV----------------------- 698
            +SL TL+L+ C  LE  PE +  ++ L+ LD+ GTA+                       
Sbjct: 881  ESLTTLDLNHCSNLETFPEIMEDMQELKNLDLRGTAIKELPSSVQRIKRLRYLDLSNCKN 940

Query: 699  ----PHSTSWYSYIPINLMR------KSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSD 748
                PH+     ++ ++L        K     + +L GL SL  L+L+ C+ MEGA+ SD
Sbjct: 941  LETLPHTIYDLEFL-VDLTAHGCPKLKKFPRNMGNLKGLRSLENLDLSYCDGMEGAIFSD 999

Query: 749  IGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCA 808
            IG    L+EL            +I+H           CK LQ +P+ P  +R++  + C 
Sbjct: 1000 IGQFYKLREL------------NISH-----------CKLLQEIPEFPSTLREIDAHDCT 1036

Query: 809  SLVTLLDA--------LKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHL 860
            +L TL           LKL KS +    C                         +T+  +
Sbjct: 1037 ALETLFSPSSPLWSSFLKLLKSATQDSEC-------------------------DTQTGI 1071

Query: 861  SVV-VPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGN--NC 916
            S + +PGS  IP W  YQ  G+ I +  P NLY      G+A   ++  +  S  +  + 
Sbjct: 1072 SKINIPGSSGIPRWVSYQKMGNHIRIRLPMNLYEDNNFFGFAFFYLYQKVNGSEKHFEDD 1131

Query: 917  FGSYPTHQL---NCHIGHGIYGIGFRD----KFGQAGSDHLWLLYLSRQTCYDIRLPLES 969
            F    + +L   +   G   + I +      K     SD LW++Y  +    D     +S
Sbjct: 1132 FPLLYSWKLLGGSSDKGDSSFFINYDPCECYKSNGGVSDRLWVVYYPKVAVLDEH---DS 1188

Query: 970  NLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEE 1008
            N    +   + +SF+      + +K  G+H VY+ + ++
Sbjct: 1189 N----QRRSLEISFDSHQATCVNIKGVGIHLVYIQDHQQ 1223


>gi|147821370|emb|CAN67940.1| hypothetical protein VITISV_013693 [Vitis vinifera]
          Length = 1386

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 333/869 (38%), Positives = 489/869 (56%), Gaps = 100/869 (11%)

Query: 13   DSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQL 72
            D   +D+RM+GI G GG+GKTTIA++VY+ I ++F  + FL +VRE  +KG  + LQ+QL
Sbjct: 163  DGDLNDIRMVGIYGPGGIGKTTIAKIVYNEIQYQFTGASFLQDVRETFNKGYQLQLQQQL 222

Query: 73   LSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRI 132
            L   +   D    N+  G++++ SRL+ KKVL+VIDDV  ++QL+S+AG+ +WFG GS I
Sbjct: 223  LHDTVG-NDVEFSNINKGVNIIKSRLRSKKVLIVIDDVDRLQQLESVAGSPKWFGPGSTI 281

Query: 133  IITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGG 192
            IIT+RD+HLL  +GV   +K   L+Y+EALQLF+  AFK   P ++ V LS  +++YA G
Sbjct: 282  IITTRDQHLLVEYGVTISHKATXLHYEEALQLFSQHAFKQNVPXEDYVDLSNCMVQYAQG 341

Query: 193  LPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACF 252
            LPLAL+V GS L G + DEW+S  ++L+  P  EI D+L+ISFDGL   +K++FLDIACF
Sbjct: 342  LPLALKVXGSSLQGMTXDEWKSASDKLKKNPMKEINDVLRISFDGLDPSQKEVFLDIACF 401

Query: 253  FKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPE 312
            FKG  +D+V+  L+GC       IRVL ++CL+T+ +N + MHDL+ E+G  IV+ + P 
Sbjct: 402  FKGECKDFVSRILDGCNLFATCNIRVLHDRCLVTISDNMIQMHDLIHEMGWAIVREECPG 461

Query: 313  ELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLK 372
            +  K SRLW  +++    +     + ++ I LD      E+    + K FSKM  LRLLK
Sbjct: 462  DPCKWSRLWDVDDIYDAFSRQEEMQNIQTISLD-LSRSREIQF--NTKVFSKMKKLRLLK 518

Query: 373  I-CN-----------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
            I CN           + LP   ++  + LR L W+   L  LP N      IEI +  S 
Sbjct: 519  IYCNDHDGLTREKYKVLLPKDFQF-PHDLRYLHWQRCTLTSLPWNFYGKHLIEINLKSSN 577

Query: 421  IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
            I +LWKG K L++LK + LS+S+ L++MP F+  PNLE+L LEGCT L E+H S+     
Sbjct: 578  IKQLWKGNKCLEELKGIDLSNSKQLVKMPKFSSMPNLERLNLEGCTSLCELHSSIGDLKS 637

Query: 481  LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
            L  LN+  C  L + P  +  +SLE L L   P                    ++FPEI 
Sbjct: 638  LTYLNLAGCEQLRSFPSSMKFESLEVLYLNCCPN------------------LKKFPEIH 679

Query: 541  EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
             +ME L EL+L  + I+ LP SI  L+ L +LNL NC + E  P    N+K LR L L G
Sbjct: 680  GNMECLKELYLNESGIQELPSSIVYLASLEVLNLSNCSNFEKFPXIHGNMKFLRELYLEG 739

Query: 601  CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDC------------ 648
            C K + FP+    M  L  L L  + IKE+PSSI  L  LE+L++S C            
Sbjct: 740  CPKFENFPDTFTYMGHLRRLHLRKSGIKELPSSIGYLESLEILDISCCSKFEKFPEIQGN 799

Query: 649  ----KNLV-------RLPSSIIALKSLKTLNLSGCFKLEN-------------------- 677
                KNL         LP+SI +L SL+ L+L  C K E                     
Sbjct: 800  MKCLKNLYLRXTAIQELPNSIGSLTSLEILSLEKCLKFEKFSDVFTNMGRLRELCLHRSG 859

Query: 678  ---VPETLGQIESLEELDISGTAVPHSTSWYSYIPIN--------LMRKSVALK-LP-SL 724
               +P ++G +ESLE L++S     + +++  +  I         L  ++ A+K LP S+
Sbjct: 860  IKELPGSIGYLESLENLNLS-----YCSNFEKFPEIQGNMKCLKELSLENTAIKELPNSI 914

Query: 725  SGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELE 784
              L +L  L L+ C+ +E   P    N+ +L  L+L + +   LP S+ HL++L ++ L+
Sbjct: 915  GRLQALESLTLSGCSNLE-RFPEIQKNMGNLWALFLDETAIEGLPYSVGHLTRLDHLNLD 973

Query: 785  DCKRLQSLPQLPPNIRQVR---VNGCASL 810
            +CK L+SLP     ++ +    +NGC++L
Sbjct: 974  NCKNLKSLPNSICELKSLEGLSLNGCSNL 1002



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 210/735 (28%), Positives = 308/735 (41%), Gaps = 154/735 (20%)

Query: 400  KFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPN-LE 458
            KF   +  M+   E+Y+  S I EL   I +L  L+V+ LS+  N  + P   G    L 
Sbjct: 674  KFPEIHGNMECLKELYLNESGIQELPSSIVYLASLEVLNLSNCSNFEKFPXIHGNMKFLR 733

Query: 459  KLILEGCTR-----------------------LYEIHPSLLLHNKLIILNMKDCTSLITL 495
            +L LEGC +                       + E+  S+     L IL++  C+     
Sbjct: 734  ELYLEGCPKFENFPDTFTYMGHLRRLHLRKSGIKELPSSIGYLESLEILDISCCSKFEKF 793

Query: 496  PG-KILMKSLEKLNLK-----SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSEL 549
            P  +  MK L+ L L+      LP +I  L  L  L +   LKF +F ++  +M  L EL
Sbjct: 794  PEIQGNMKCLKNLYLRXTAIQELPNSIGSLTSLEILSLEKCLKFEKFSDVFTNMGRLREL 853

Query: 550  HLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR--------------- 594
             L  + I+ LP SI  L  L  LNL  C + E  P    N+KCL+               
Sbjct: 854  CLHRSGIKELPGSIGYLESLENLNLSYCSNFEKFPEIQGNMKCLKELSLENTAIKELPNS 913

Query: 595  --------SLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLS 646
                    SL LSGCS L++FPEI ++M +L  LFLD T+I+ +P S+  LT+L+ LNL 
Sbjct: 914  IGRLQALESLTLSGCSNLERFPEIQKNMGNLWALFLDETAIEGLPYSVGHLTRLDHLNLD 973

Query: 647  DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYS 706
            +CKNL  LP+SI  LKSL+ L+L+GC  LE   E    +E LE L +  T +    S   
Sbjct: 974  NCKNLKSLPNSICELKSLEGLSLNGCSNLEAFSEITEDMEQLERLFLRETGISELPSSIE 1033

Query: 707  YI----PINLMRKSVALKLPSLSG--------------------------LCSLRKLNLT 736
            ++     + L+     + LP+  G                           C L  L+L 
Sbjct: 1034 HLRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSLQCCLTMLDLG 1093

Query: 737  DCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP 796
             CNLME  +PSD+  L  L  L +S+N    +P  IT L KL  + +  C  L+ + +LP
Sbjct: 1094 GCNLMEEEIPSDLWCLSLLVFLNISENRMRCIPAGITQLCKLRTLLINHCPMLEVIGELP 1153

Query: 797  PNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNT 856
             ++  +  +GC SL T                           S +           S  
Sbjct: 1154 SSLGWIEAHGCPSLET-------------------------ETSSSLLWSSLLKHLKSPI 1188

Query: 857  RQHLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNN 915
            +Q  ++++PGS  IPEW  +Q  G  ++V  P N Y    L+G+ +   FH +     + 
Sbjct: 1189 QQKFNIIIPGSSGIPEWVSHQRMGCEVSVELPMNWYEDNNLLGFVL--FFHHVPLDDDDE 1246

Query: 916  CF---GSYPTHQLNCHIGHG-----IYGIGF-----------------RDKFGQAGSDHL 950
            C    G  P  +L   I HG     +  IGF                 R   G      L
Sbjct: 1247 CVRTSGFIPHCKLA--ISHGDQSKRLDDIGFHPHCKTYSISGLSYGSTRYDSGSTSDPAL 1304

Query: 951  WLLYLSRQTCYDIRLPLE------SNLEPFESNHV-NVSFEPWLGQGLEVKMCGLHPVYM 1003
            W+ Y  +     I +P +      +N +    N V N SF        +VK CG+H +Y 
Sbjct: 1305 WVTYFPQ-----IGIPSKYRSRKWNNFKAHFDNPVGNASFTCGENASFKVKSCGIHLIYA 1359

Query: 1004 DEVEELDQTTNQPSR 1018
             + +       QPSR
Sbjct: 1360 QDQKHWP----QPSR 1370


>gi|302398863|gb|ADL36726.1| HD domain class transcription factor [Malus x domestica]
          Length = 909

 Score =  504 bits (1298), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 309/726 (42%), Positives = 432/726 (59%), Gaps = 70/726 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++ R +++ FL+D   + V  IGI GMGG+GKTT+AR+VY+  SH FE S FL NVREI 
Sbjct: 204 IEFRLKEICFLLDIAENHVCFIGIWGMGGIGKTTLARLVYEKFSHNFEVSIFLANVREIY 263

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +K GLV LQ+QLLSQ+LK  D  +W+V+ GI M  S L  KK LL++DDV  + QL+ L 
Sbjct: 264 AKHGLVHLQKQLLSQILKEKDVQVWDVYSGITMAKSFLCNKKALLILDDVDQLNQLEKLV 323

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G + WFG GSRII+T+RD HLL  HG+++ Y+   L+ DEA QLFN KAFK  +P ++ +
Sbjct: 324 GEKYWFGLGSRIIVTTRDRHLLVAHGIEKQYEVVELDEDEAYQLFNWKAFKEDEPQEKYL 383

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS + ++YA GLPLAL  LGSFL  R    W S L +L+  P   + ++L+IS+DGL E
Sbjct: 384 ELSKQFVKYARGLPLALRTLGSFLYKRDPYAWSSALNKLKQTPNRTVFEMLKISYDGLDE 443

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
           +EK+IFLDIACF K +D++ V   L+ CGF   I I VL+EK L+T+   ++ MHDL+QE
Sbjct: 444 MEKRIFLDIACFHKWSDKERVIEVLDSCGFCARIVIDVLVEKSLLTISGKSVCMHDLIQE 503

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +  +IV+ +S EE G RSRLW  +++ HVLT++TG + +EGIVL     E   +   + +
Sbjct: 504 MAWEIVRGESFEEPGARSRLWLRDDIFHVLTKNTGKKAIEGIVLRLREFEEAHW---NPE 560

Query: 361 AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
           AFSKM NL+LL I NL+L  G +YL N LR L W  YP KFLP   Q ++  E+ + +S+
Sbjct: 561 AFSKMCNLKLLDIDNLRLSVGPKYLPNALRFLKWSWYPSKFLPPGFQPNELTELSLPHSK 620

Query: 421 IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
           I  LW GIK+  KLK + LS+S+NL R PDFTG  NLE+L+LEGCT L EIHPS+     
Sbjct: 621 IDYLWNGIKYFRKLKSIDLSYSQNLTRTPDFTGLQNLERLVLEGCTNLVEIHPSIASLKC 680

Query: 481 LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
           L ILN ++C S+  LP ++ M++LE                    D+SG  K ++ PE  
Sbjct: 681 LRILNFRNCKSIKILPNEVKMETLE------------------VFDLSGCSKVKKIPEFG 722

Query: 541 EHMEHLSELHLEGTAIRGLPL------------------------SIELLSGLVLLNLKN 576
             M+++S+L+L GTA+  LPL                        SI  +  L L +   
Sbjct: 723 GQMKNVSKLYLGGTAVEELPLSFKGLIESLEELDLTGISIREPLSSIGPMKNLDLSSFHG 782

Query: 577 C-------------------RSLEILPVTVSNLKCLRSLK---LSGCSKLK-KFPEIVRS 613
           C                    SL  + + +++LK  RSLK   LS C+      PE +  
Sbjct: 783 CNGPPPQPRFSFLPSGLFPRNSLSPVNLVLASLKDFRSLKKLDLSDCNLCDGALPEDIGC 842

Query: 614 MKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCF 673
           +  L EL L G +   +P+SI  L+KL   NL++CK L +LP   + L +   L    C 
Sbjct: 843 LSSLKELNLGGNNFVSLPTSIGCLSKLSFFNLNNCKRLQQLPD--LPLNNRIYLKTDNCT 900

Query: 674 KLENVP 679
            L+ +P
Sbjct: 901 SLQMLP 906



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/280 (36%), Positives = 147/280 (52%), Gaps = 55/280 (19%)

Query: 587 VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNL 645
           +   + L+S+ LS    L + P+    +++L  L L+G T++ E+  SI  L  L +LN 
Sbjct: 628 IKYFRKLKSIDLSYSQNLTRTPDFT-GLQNLERLVLEGCTNLVEIHPSIASLKCLRILNF 686

Query: 646 SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQ--------------------- 684
            +CK++  LP+ +  +++L+  +LSGC K++ +PE  GQ                     
Sbjct: 687 RNCKSIKILPNEV-KMETLEVFDLSGCSKVKKIPEFGGQMKNVSKLYLGGTAVEELPLSF 745

Query: 685 ---IESLEELDISGTAV-----------------------PHSTSWYSYIPINLMRKS-- 716
              IESLEELD++G ++                       P     +S++P  L  ++  
Sbjct: 746 KGLIESLEELDLTGISIREPLSSIGPMKNLDLSSFHGCNGPPPQPRFSFLPSGLFPRNSL 805

Query: 717 --VALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITH 774
             V L L SL    SL+KL+L+DCNL +GALP DIG L SLKEL L  N+FVSLPTSI  
Sbjct: 806 SPVNLVLASLKDFRSLKKLDLSDCNLCDGALPEDIGCLSSLKELNLGGNNFVSLPTSIGC 865

Query: 775 LSKLLNIELEDCKRLQSLPQLPPNIR-QVRVNGCASLVTL 813
           LSKL    L +CKRLQ LP LP N R  ++ + C SL  L
Sbjct: 866 LSKLSFFNLNNCKRLQQLPDLPLNNRIYLKTDNCTSLQML 905


>gi|147858727|emb|CAN82909.1| hypothetical protein VITISV_025072 [Vitis vinifera]
          Length = 1177

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 317/732 (43%), Positives = 430/732 (58%), Gaps = 104/732 (14%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MDSR E L  L+  GS+DVR +GI GM G+GKTTIA  +YD I  +F+   FL +VRE S
Sbjct: 199 MDSRMEDLLSLLCIGSNDVRFVGIWGMAGIGKTTIAEAIYDRIYTKFDGCCFLKDVREDS 258

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            + GL  LQ  LLS++L      I N+  GI+ + +RL  KKVL+V+D+VV  ++L++L 
Sbjct: 259 QRHGLTYLQETLLSRVL----GGINNLNRGINFIKARLHSKKVLIVLDNVVHRQELEALV 314

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G+ +WFG GSRIIIT+R++ LL    +D +Y+   L YDEAL+LF   AF+   P ++ +
Sbjct: 315 GSHDWFGPGSRIIITTREKRLLIEQEMDAIYEVEKLEYDEALKLFCQYAFRYKHPTEDFM 374

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           QL    + Y G LPLAL+VLGS L  +S+ EW+S L++    P  E+L++L+ SFDGL +
Sbjct: 375 QLCHHAVDYTGSLPLALKVLGSCLYRKSIHEWKSELDKFNQFPNKEVLNVLKTSFDGLDD 434

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            EK +FLDIA F+KG D+D+V   L+   F PV  I  L++K LIT+ +N L+MHDLLQE
Sbjct: 435 NEKNMFLDIAFFYKGEDKDFVIEVLD--NFFPVSEIGNLVDKSLITISDNKLYMHDLLQE 492

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G +IV+++S ++ GKRSRL   E++  VLT + GTE VEG+V D      E+ L  S  
Sbjct: 493 MGWEIVRQESIKDPGKRSRLRVHEDIHDVLTTNKGTEAVEGMVFD-LSASKELNL--SVD 549

Query: 361 AFSKMTNLRLLKICNLQLPNGLEYL----------------------------------- 385
           AF+KM  LRLL+  N Q     EYL                                   
Sbjct: 550 AFAKMNKLRLLRFYNCQFYGSSEYLSEKELIASTHDARRWMGYDNSPYNDSKLHLSRDFK 609

Query: 386 --SNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSE 443
             SN LR L W GYPLK LPSN   +K +E+ MCYS + +LW+G K  +KLK + LSHS+
Sbjct: 610 FPSNNLRSLHWHGYPLKSLPSNFHPEKLVELNMCYSLLKQLWEGKKAFEKLKFIKLSHSQ 669

Query: 444 NLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKS 503
           +L + PDF+ AP L ++IL GCT L ++HPS+    +LI LN++ C+ L           
Sbjct: 670 HLTKTPDFSAAPKLRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKL----------- 718

Query: 504 LEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVE-HMEHLSELHLEGTAIRGLPLS 562
                                          +FPE+V+ ++E LS + LEGTAIR LP S
Sbjct: 719 ------------------------------EKFPEVVQGNLEDLSGISLEGTAIRELPSS 748

Query: 563 IELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL 622
           I  L+ LVLLNL+NC  L  LP ++  L  L++L LSGCSKLKK P+ +  ++ L EL +
Sbjct: 749 IGSLNRLVLLNLRNCEKLASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVELNV 808

Query: 623 DGTSIKEVPSSIELLTKLELLNLSDCK-------NLVRLPSSIIA---------LKSLKT 666
           DGT IKEV SSI LLT LE L+L+ CK       NL+   SS  A         L SLK+
Sbjct: 809 DGTGIKEVTSSINLLTNLEALSLAGCKGGGSKSRNLISFRSSPAAPLQLPFLSGLYSLKS 868

Query: 667 LNLSGCFKLENV 678
           LNLS C  LE  
Sbjct: 869 LNLSDCNLLEGA 880



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 120/272 (44%), Gaps = 43/272 (15%)

Query: 523 STLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL-E 581
           S L +S D KF           +L  LH  G  ++ LP +      LV LN+  C SL +
Sbjct: 600 SKLHLSRDFKFPS--------NNLRSLHWHGYPLKSLPSNFHP-EKLVELNM--CYSLLK 648

Query: 582 ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLE 641
            L       + L+ +KLS    L K P+   + K L  + L+G                 
Sbjct: 649 QLWEGKKAFEKLKFIKLSHSQHLTKTPDFSAAPK-LRRIILNG----------------- 690

Query: 642 LLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL-GQIESLEELDISGTAVPH 700
                 C +LV+L  SI ALK L  LNL GC KLE  PE + G +E L  + + GTA+  
Sbjct: 691 ------CTSLVKLHPSIGALKELIFLNLEGCSKLEKFPEVVQGNLEDLSGISLEGTAIRE 744

Query: 701 -STSWYSYIPINLMRKSVALKLPSLSG----LCSLRKLNLTDCNLMEGALPSDIGNLCSL 755
             +S  S   + L+      KL SL      L SL+ L L+ C+ ++  LP D+G L  L
Sbjct: 745 LPSSIGSLNRLVLLNLRNCEKLASLPQSICELISLQTLTLSGCSKLK-KLPDDLGRLQCL 803

Query: 756 KELYLSKNSFVSLPTSITHLSKLLNIELEDCK 787
            EL +       + +SI  L+ L  + L  CK
Sbjct: 804 VELNVDGTGIKEVTSSINLLTNLEALSLAGCK 835


>gi|147767848|emb|CAN75658.1| hypothetical protein VITISV_003715 [Vitis vinifera]
          Length = 2019

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 357/946 (37%), Positives = 510/946 (53%), Gaps = 148/946 (15%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M+ R EKL+ L++   + VRM+GICG+GG+GKTTI + +Y+ IS++F+   FL NVRE S
Sbjct: 175  MNIRLEKLKSLINIYLNKVRMVGICGIGGIGKTTITKALYNQISNQFQGVSFLANVREKS 234

Query: 61   SKG-GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
                GL+ LQ+QLL+ +LK  +  I NV +G++++ + L  ++VL+V+DDV +++QL  L
Sbjct: 235  EYDFGLLQLQQQLLNDILKRKNREISNVHEGMNVIKNELSLRRVLVVLDDVDNLRQLVHL 294

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKP-HGLNYDEALQLFNMKAFKTYQPLQE 178
             G  +WFG GSRI+IT+RD HLL  HGVD+ Y     LN  EALQLF++  FK   P ++
Sbjct: 295  VGKHDWFGQGSRILITTRDRHLLDAHGVDKPYHEIEELNSKEALQLFSLYTFKQNFPQED 354

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
               LS  I++YA GLPLAL++LGS L      EW S L +LE EP  EI ++L+ISF GL
Sbjct: 355  YKDLSDHIVKYATGLPLALQLLGSHLC-----EWESELCKLEREPVPEIQNVLKISFHGL 409

Query: 239  QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
               +++IFLDIACFFKG D+D+V+  L+GC F+   G RVL ++CL+T+ +N + MHDL+
Sbjct: 410  DPTQREIFLDIACFFKGKDKDFVSRILDGCDFYAESGFRVLRDRCLMTILDNKIHMHDLI 469

Query: 299  QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
            Q++G QIV+ Q  ++ GK SRLW+  +V HVLT +TGTE +EGI LD    +   +   +
Sbjct: 470  QQMGWQIVREQYHKKPGKWSRLWEPNDVSHVLTRNTGTEAIEGIFLDMSTSKQMQF---T 526

Query: 359  AKAFSKMTNLRLLKI-----------------------CNLQLPNGLEYLSNRLRLLGWR 395
             +AF  M  LRLLK+                         +      E+ S  LR L W 
Sbjct: 527  TEAFKMMNKLRLLKVHQDAKYDSIVYSWMPVEPSKVLLSQVHFCRDFEFPSQELRCLHWD 586

Query: 396  GYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAP 455
            GYPL+ LPSN      +E+ +  S I +LWK       LKV+ LS+SE+L ++P+  G P
Sbjct: 587  GYPLESLPSNFCAKNLVELNLRCSNIKQLWKTETLHKNLKVINLSYSEHLNKIPNPLGVP 646

Query: 456  NLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTT 515
            NLE L LEG                        C +L +L                 P +
Sbjct: 647  NLEILTLEGW-----------------------CVNLESL-----------------PRS 666

Query: 516  ISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLK 575
            I  L+CL TL  SG +    FPEI+ +ME+L EL+L+ TAI  LP SI+ L GL  L L 
Sbjct: 667  IYKLRCLKTLCCSGCVSLSSFPEIMGNMENLRELYLDDTAIVKLPSSIKHLKGLEYLTLV 726

Query: 576  NCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIE 635
             C  L+ +P ++ NL  L+ L  S CSKL+K PE ++S+K L  L L   +         
Sbjct: 727  KCDDLKTVPQSICNLTSLKLLDFSSCSKLEKLPEDLKSLKCLETLSLHAVN--------- 777

Query: 636  LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
                             +LP S+  L SL+ L L      + V ++   + SL+ LD+S 
Sbjct: 778  ----------------CQLP-SLSGLCSLRKLYLGRSNLTQGVIQSNNLLNSLKVLDLSR 820

Query: 696  TAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSL 755
              V              + K + +++  LS   SL +LNL +CNLM+G +PS++  L SL
Sbjct: 821  NNV--------------IDKGILIRICHLS---SLEELNLKNCNLMDGEIPSEVCQLSSL 863

Query: 756  KELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNG--CASLVTL 813
            + L LS N F S+P SI+ LSKL  + L  CK LQ +P+LP  +R +  +   CA     
Sbjct: 864  EILDLSWNHFNSIPASISQLSKLKALGLSHCKMLQQIPELPSTLRLLDAHNSHCALSSPS 923

Query: 814  LDALKL--------CKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVP 865
                          C S S +  C DS    G                    + + +V+P
Sbjct: 924  SFLSSSFSKFQDFECSSSSQVYLC-DSPYYFG--------------------EGVCIVIP 962

Query: 866  G-SEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKN 910
            G S IPEW M QN G+ +T+  P + Y  K  +G+A+C  +  L N
Sbjct: 963  GISGIPEWIMDQNMGNHVTIDLPQDWYADKDFLGFALCSAYVPLDN 1008


>gi|399920187|gb|AFP55534.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1038

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 301/669 (44%), Positives = 426/669 (63%), Gaps = 19/669 (2%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD++ E++  L+D  ++DVR IGI GMGG+GKTT+AR+VY+ ISH+FE   FL NVRE+S
Sbjct: 169 MDTKLEEIDALLDKEANDVRFIGIWGMGGMGKTTLARLVYENISHQFEVCIFLANVREVS 228

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +  GLV LQ+Q+LSQ+LK  +  +W+V  GI M+   +  K+VLLV+DDV   +QL++L 
Sbjct: 229 ATHGLVHLQKQILSQILKEENVQVWDVHSGITMIKRCVCNKEVLLVLDDVDHSEQLKNLV 288

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G +++FG  SRIIIT+R+ H+L  H +++ Y+  GL  DEALQLF+ KAF+  +P ++  
Sbjct: 289 GEKDYFGLRSRIIITTRNRHVLVEHDIEKQYELKGLEEDEALQLFSWKAFRKIEPEEDYA 348

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           + S   +RYA GLPLAL++LGSFL  RS+D W S  ++L+  P   + +IL+ISFDGL E
Sbjct: 349 EQSKSFVRYAEGLPLALKILGSFLYKRSLDSWSSAFQKLKQTPNPTVFEILKISFDGLDE 408

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQ 299
           +EKK FLDIACF +  D + +   +        I I VL+EK LIT+   N +++HDL+Q
Sbjct: 409 MEKKTFLDIACFRRLYDNESMIEQVYSSELCSRIAIEVLVEKSLITISFGNHVYVHDLIQ 468

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G++IV RQ  EE G RSRLW    + HV T++TGTE+ EGI L  +  E   +   + 
Sbjct: 469 EMGREIV-RQENEEPGGRSRLWLRNNIFHVFTKNTGTEVTEGIFLHLHELEEADW---NL 524

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           +AFSKM NL+LL I NL+L  G +YL + LR+L W  YP K LP   Q D+  E+   +S
Sbjct: 525 EAFSKMCNLKLLYIHNLRLSLGPKYLPDALRILKWSWYPSKSLPPGFQPDELTELSFVHS 584

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
            I  LW GIK+LDKLK + LS+S NL R PDFTG PNLEKL+LEGCT L +IHPS+ L  
Sbjct: 585 NIDHLWNGIKYLDKLKSIDLSYSINLTRTPDFTGIPNLEKLVLEGCTNLVKIHPSIALLK 644

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKF 533
           +L I N ++C S+ +LP ++ M+ LE  +      LK +P  +   K LS L + G    
Sbjct: 645 RLKIWNFRNCKSIKSLPSEVNMEFLETFDVSGCSKLKMIPEFVGQTKRLSKLYLGG-TAV 703

Query: 534 REFPEIVEHM-EHLSELHLEGTAIRGLPLSIELLSGLV-----LLNLKNCRSLEILPVTV 587
            + P  +EH+ + L EL L G  IR  P S+ L   L+     LL  K+   L  L  ++
Sbjct: 704 EKLPSSIEHLSKSLVELDLSGIVIREQPYSLFLKQNLIVSSFGLLPRKSPHPLIPLLASL 763

Query: 588 SNLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLS 646
                L SLKL+ C+  + + P  + S+  L+ L L G +   +P+SI LL+KL  ++L 
Sbjct: 764 KQFSSLTSLKLNDCNLCEGEIPNDIGSLPSLNWLELRGNNFVSLPASIHLLSKLSYIDLE 823

Query: 647 DCKNLVRLP 655
           +CK L +LP
Sbjct: 824 NCKRLQQLP 832



 Score =  174 bits (441), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 128/377 (33%), Positives = 190/377 (50%), Gaps = 50/377 (13%)

Query: 587 VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNL 645
           +  L  L+S+ LS    L + P+    + +L +L L+G T++ ++  SI LL +L++ N 
Sbjct: 593 IKYLDKLKSIDLSYSINLTRTPDFT-GIPNLEKLVLEGCTNLVKIHPSIALLKRLKIWNF 651

Query: 646 SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHST 702
            +CK++  LPS +  ++ L+T ++SGC KL+ +PE +GQ + L +L + GTAV   P S 
Sbjct: 652 RNCKSIKSLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQTKRLSKLYLGGTAVEKLPSSI 710

Query: 703 SWYS--------------------YIPINLMRKSVALK-----------LPSLSGLCSLR 731
              S                    ++  NL+  S  L            L SL    SL 
Sbjct: 711 EHLSKSLVELDLSGIVIREQPYSLFLKQNLIVSSFGLLPRKSPHPLIPLLASLKQFSSLT 770

Query: 732 KLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQS 791
            L L DCNL EG +P+DIG+L SL  L L  N+FVSLP SI  LSKL  I+LE+CKRLQ 
Sbjct: 771 SLKLNDCNLCEGEIPNDIGSLPSLNWLELRGNNFVSLPASIHLLSKLSYIDLENCKRLQQ 830

Query: 792 LPQLPP-NIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYL 850
           LP+LP  +   V  + C SL+   D   L +   T + CL ++         +S+++  L
Sbjct: 831 LPELPASDYLNVATDDCTSLLVFPDPPDLSRFSLTAVNCLSTVGNQDASYYLYSVIKRLL 890

Query: 851 EAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGY----------- 899
           E   ++      V+PGSEIPEWF  Q+ G  +T   PS+  N K +  Y           
Sbjct: 891 EETPSSFHFHKFVIPGSEIPEWFNNQSVGDRVTEKLPSDACNSKWIGPYWKRRNCLEDTC 950

Query: 900 -AICCVFHVLKNSRGNN 915
             +   FH +  + GNN
Sbjct: 951 NEVTFSFHKITRAVGNN 967


>gi|298204612|emb|CBI23887.3| unnamed protein product [Vitis vinifera]
          Length = 1384

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 387/1240 (31%), Positives = 585/1240 (47%), Gaps = 278/1240 (22%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +DS  +++   +   SSDVR++GI G+GG+GKTTIA+V+Y+ +S EFE   FL+N+RE+S
Sbjct: 198  IDSHVKEMILRLHMESSDVRIVGIYGVGGMGKTTIAKVIYNELSCEFECMSFLENIREVS 257

Query: 61   SKGGLVSLQRQLLSQLLK-LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            +   L  LQ QLL  +L+     +I +V     M+   L  KKV +V+DDV D  QL++L
Sbjct: 258  NPQVLYHLQNQLLGDILEGEGSQNINSVAHKASMIKDILSSKKVFMVLDDVDDPSQLENL 317

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
             G+REW G GS++IIT+RD+H+L    VD +Y+  GLN+ EA +LF++ AFK   P    
Sbjct: 318  LGHREWLGEGSKVIITTRDKHVLAVQEVDVLYEVKGLNFKEAHELFSLYAFKQNLPQSNY 377

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
              LS R++ Y  GLPLAL+VLGS L  +++ +W S L++L+ EP  +I ++L+ S+DGL 
Sbjct: 378  RDLSHRVVGYCQGLPLALKVLGSLLFKKTIPQWESELDKLDKEPEMKIHNVLKRSYDGLD 437

Query: 240  ELEKKIFLDIACFFKGN-DRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
              EKKIFLD+ACFFKG  DRD+V+  L+GC FH   GIR L ++CLIT+  N + MHDL+
Sbjct: 438  RTEKKIFLDVACFFKGEEDRDFVSRILDGCHFHAERGIRNLNDRCLITLPYNQIHMHDLI 497

Query: 299  QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
            ++ G +IV+ + P E  K SRLW  +++   L    G E VE I L+    E    +C +
Sbjct: 498  RQTGWEIVREKFPNEPNKWSRLWDTQDIQRALRTYEGIEGVETIDLNLSDFER---VCFN 554

Query: 359  AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
            +  FSKMTNLRLL++ +    +   +               +    +LQ           
Sbjct: 555  SNVFSKMTNLRLLRVHSDDYFDPYSHDDMEEEEDEEDEEEEEEKEKDLQ----------- 603

Query: 419  SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
                           LKV+ LSHS  L++MP+F+  PNLE+LIL+GC  L  I PS+   
Sbjct: 604  --------------SLKVIDLSHSNKLVQMPEFSSMPNLEELILKGCVSLINIDPSVGDL 649

Query: 479  NKLIILNMKDCTSLITLPGKIL-MKSLEKLNL---------------------------- 509
             KL  L+++ C  L  LP  I  +++LE L+L                            
Sbjct: 650  KKLTTLDLRGCVKLKGLPSSISNLEALECLDLTRCSSFDKFAEIQGIQGNMSSLTHLYLR 709

Query: 510  ----KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIEL 565
                + LP++I  L+ +  LD+S   KF +FPE   +M+ L++L LE TAI+ LP  I  
Sbjct: 710  KTAIRELPSSID-LESVEILDLSDCSKFEKFPENGANMKSLNDLRLENTAIKELPTGIAN 768

Query: 566  LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG-----------------------CS 602
               L +L+L  C   E  P    N+K L+ L+ +G                       CS
Sbjct: 769  WESLEILDLSYCSKFEKFPEKGGNMKSLKKLRFNGTSIKDLPDSIGDLESLEILDLSYCS 828

Query: 603  KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVR--------- 653
            K +KFPE   +MK L +L  +GTSIK++P SI  L  LE+L+LS C    +         
Sbjct: 829  KFEKFPEKGGNMKSLKKLRFNGTSIKDLPDSIGDLESLEILDLSYCSKFEKFPEKGGNMK 888

Query: 654  --------------LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV- 698
                          LP SI  L+SL+ L+LS C K E  PE  G ++SL++L +  TA+ 
Sbjct: 889  SLKKLHLKNTAIKDLPDSIGDLESLEILDLSKCLKFEKFPEKGGNMKSLKKLSLINTAIK 948

Query: 699  --PHST--------------SWYSYIP---------------------INLMRKSVALKL 721
              P S               S +   P                     ++L+  ++    
Sbjct: 949  DLPDSVGDLESLEILHLSECSKFEKFPEKGGNMKKISGEGREHEKIKAVSLINTAIKDLP 1008

Query: 722  PSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLS--KLL 779
             S+  L SL  L+L++C+  E   P   GN+ SLKELYL   +   LP SI  L   K+L
Sbjct: 1009 DSIGDLESLESLDLSECSKFE-KFPEKGGNMKSLKELYLINTAIKDLPDSIGGLESLKIL 1067

Query: 780  NIE-------------------------------------------LEDCKRLQSLPQLP 796
            N++                                           +  C+  + +P LP
Sbjct: 1068 NLKNTAIKDLPNISRLKFLKRLILCDRSDMWEGLISNQLCNLQKPNISQCEMARQIPVLP 1127

Query: 797  PNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNT 856
             ++ ++  + C S   L   L LC                          R +L++ +  
Sbjct: 1128 SSLEEIDAHHCTSKEDLSGLLWLCH-------------------------RNWLKSTAEE 1162

Query: 857  RQ--HLSVVVP-GSEIPEW-FMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSR 912
             +   LS  +P  S I EW   YQN GS +T   P N Y     +G+ + CV+       
Sbjct: 1163 LKSWKLSARIPESSGIQEWRIRYQNLGSEVTAKLPMNWYEDPDFLGFFVSCVYQ------ 1216

Query: 913  GNNCFGSYPTHQ--LNCHIGHGIYGIGFRDKF------GQAGS-----DHLWLLYLSRQT 959
                    P+H+  L C +     G  F+D+       G  G+     D +W+ +  +  
Sbjct: 1217 --------PSHKSTLKCELNLHGNGFEFKDRTWCDCWCGSHGNFKELIDQVWVWWYPK-- 1266

Query: 960  CYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYM-DEVEEL--------- 1009
               I +P E      +S H+N SF+     G+ +K CG++ ++  D+   +         
Sbjct: 1267 ---IAIPKELR----KSTHINASFK---NPGINIKKCGINLIFAGDQRNHMPMLEHPQNS 1316

Query: 1010 --DQTTNQPSRFTVYNLNEFDQHFVGSKMIVATTSKRSLT 1047
              + + +Q +   V+  N+ D+H+     I A T  RSL 
Sbjct: 1317 GDNGSASQDTDGNVHGANQDDEHY----HIPAITQHRSLA 1352


>gi|359486106|ref|XP_002274951.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1320

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 380/1121 (33%), Positives = 597/1121 (53%), Gaps = 143/1121 (12%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +DSR +++   +   SSDVR++GI G+GG+GKTTIA+V+YD +S +FE   F++N+RE S
Sbjct: 197  IDSRVKEMILRLQMESSDVRIVGIYGVGGIGKTTIAKVIYDKLSCKFECMSFVENIRENS 256

Query: 61   SKGGLVSLQRQLLSQLLKLA-DNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            +K GL  LQ QLL  +L+     +I NV  G  M+ + L  K+V +++DDV   KQL++L
Sbjct: 257  NKQGLTHLQNQLLGDILEEERSQNINNVDVGASMIRTALSSKRVFIILDDVDHRKQLEAL 316

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
              +R W G GSR+IIT+R+ HLL    VD+ Y+  GLN +EA +LF++ AFK   P  + 
Sbjct: 317  LRHRGWLGKGSRVIITTRNRHLLIEQEVDDSYEVEGLNSEEACELFSLHAFKQNLPKSDF 376

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            + LS  ++ Y  GLPLALEVLGS L   ++ +W S L +L  EP +EI D+L+ S+ GL 
Sbjct: 377  INLSHHMVDYCQGLPLALEVLGSLLFNMTIPQWESQLHKLAKEPMAEIHDVLKSSYGGLD 436

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLL 298
              EK I LD+ACFFKG +RD+V   L+ C     IGI+ L  KCLIT+ +N+ + MHDL+
Sbjct: 437  RTEKDILLDVACFFKGEERDFVLRMLDACA---EIGIQNLKNKCLITLPYNHMIGMHDLI 493

Query: 299  QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
            Q++  +IV+   P+E  K SRLW   ++   LT   G + VE I LD    +   +    
Sbjct: 494  QQMCWKIVRENFPKEPNKWSRLWDAHDIECALTTFKGIKKVETISLDLSKLKRVSF---D 550

Query: 359  AKAFSKMTNLRLLKI-----CNLQLP----NGLEYLSNRLRLLGWRGYPLKFLPSNLQMD 409
            +  F+KMT+LRLLK+     C   +     + ++  ++++RL    G   +F PS   + 
Sbjct: 551  SNVFTKMTSLRLLKVHSGVDCYEDMEEKHYDVVKKNASKMRL----GPDFEF-PS-YHLR 604

Query: 410  KTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLY 469
            K +E+++ +S I +LW+  K+L+ L+V+ LS+S  LI+M +F+  PNLE+LIL+GC  L 
Sbjct: 605  KLVELHLNWSNIKQLWQENKYLEGLRVIDLSYSRELIQMLEFSSMPNLERLILQGCLSLI 664

Query: 470  EIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG 529
            +IHPS+    KL  L+++ C                  NLK LP +I  L+ L  LD++ 
Sbjct: 665  DIHPSVGNMKKLTTLSLRGCD-----------------NLKDLPDSIGDLESLEILDLTD 707

Query: 530  DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCR----------- 578
              +F +FPE   +M+ L EL L  TAI+ LP SI  L  L +L L +C            
Sbjct: 708  CSRFEKFPEKGGNMKSLKELFLRNTAIKDLPNSIGNLESLKILYLTDCSKFDKFPEKGGN 767

Query: 579  ------------SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS 626
                        +++ LP ++ +L+ L +L LS CSK +KFPE   +MK L ELFL  T+
Sbjct: 768  MKSLKELSLINTAIKDLPDSIGDLESLETLDLSDCSKFEKFPEKGGNMKSLKELFLIKTA 827

Query: 627  IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIE 686
            IK++P+SI  L  LE+L+LS      + P     +KSL+ L L     ++++P+++G +E
Sbjct: 828  IKDLPNSIGDLGSLEVLDLSYYSRFEKFPEKGGNMKSLEVLILKNS-AIKDLPDSIGDLE 886

Query: 687  SLEELDISGTA----VPHSTSWYSYIPINLMRKSVALK-LP-SLSGLCSLRKLNLTDCNL 740
            SLE LD+S  +     P        +  NL   + A+K LP S+  L SL  L+L+DC+ 
Sbjct: 887  SLETLDLSDCSRFEKFPEKGGNMKSLE-NLFLINTAIKDLPDSIGDLESLEILDLSDCSK 945

Query: 741  MEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIR 800
             E   P     +  L +L L + +   L +SI +LS L N+ + +CK L+SLP    NI 
Sbjct: 946  FE-KFPEMKRGMKHLYKLNLRRTTIEELTSSIDNLSGLRNLIIAECKSLRSLPD---NIS 1001

Query: 801  QVR------VNGCASLVTLLDALKLCKSDSTMIA-C---------------LDSLKLLGN 838
            +++      ++GC+ L   L + +LC      I+ C               +D+      
Sbjct: 1002 RLKFLETLILSGCSDLWEGLISNQLCNLGKLNISQCKMAGQILELPSSLEEIDAHDCRSK 1061

Query: 839  KSLAFSMLREYLEAVSNTRQHL------SVVVPGSEIPEWFMYQNEGSSITVTRPSNLYN 892
            + L+  +   +L  + +T + L      +++   S  PEW  YQN G+ +T   P+N Y 
Sbjct: 1062 EDLSSLLWICHLNWLKSTTEELKCWKLRAIIPENSGNPEWIRYQNLGTEVTTELPTNWYE 1121

Query: 893  KKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDK--FGQAGS--- 947
                +G+ + CV   +  S G++ F       L C +     G  F+DK  F        
Sbjct: 1122 DPDFLGFVVSCVCRSIPTSDGHSYF-------LGCALKLHGNGFEFKDKCLFDCQCKCHG 1174

Query: 948  -----DHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVY 1002
                 D +W+ +  +     I +P E +    +  H+N SF    G+  E+K CG++ ++
Sbjct: 1175 INDLVDQVWVWWYPK-----IAIPKEHH---HKYTHINASFR---GKWTEIKKCGINLIF 1223

Query: 1003 MDEVEEL------------DQTTNQPSRFTVYNLNEFDQHF 1031
              + +              D +  Q +   V+  N+ D+H+
Sbjct: 1224 AGDQQNHMPMLEHPQNSGDDGSALQDTDGNVHGANQDDEHY 1264


>gi|399920221|gb|AFP55568.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1143

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 301/696 (43%), Positives = 427/696 (61%), Gaps = 19/696 (2%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD++ E++  L+D  ++DVR IGI GMGG+GKTT+AR+VY  ISH+FE   FL NVRE+S
Sbjct: 208 MDTKWEEIDVLLDKKANDVRFIGIWGMGGMGKTTLARLVYQKISHQFEVCIFLANVREVS 267

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +  GLV LQ Q+LSQ+LK  ++ +W+V+ GI M+    + K VLLV+DDV   +QL+ LA
Sbjct: 268 ATHGLVCLQNQILSQILKEGNDQVWDVYSGITMIKRCFRNKAVLLVLDDVDQSEQLEHLA 327

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G ++ FG  SRIIIT+RD H+L TH +++ Y+   L  DEALQLF+ KAF+ ++P ++  
Sbjct: 328 GEKDCFGLRSRIIITTRDRHVLVTHDIEKPYELKRLGEDEALQLFSWKAFRKHEPEEDYA 387

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           + S   +RYAGGLPLAL++LGSFL  RS+D W S  ++L+  P   + +IL+ISFDGL E
Sbjct: 388 EQSKSFVRYAGGLPLALKILGSFLYKRSLDSWSSAFQKLKQTPNPTVFEILKISFDGLDE 447

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQ 299
           +EKK FLDIACF +  D + +   +   GF   I I VL+EK L+ +   N ++MHDL++
Sbjct: 448 MEKKTFLDIACFRRLYDNESMIEQVYSSGFCSRIAIEVLVEKSLLAISFGNHVYMHDLIR 507

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G +IV+++S +E G RSRLW   ++ HV T++TGTE+ EGI L     E   +   + 
Sbjct: 508 EMGCEIVRQESCDEPGGRSRLWLRNDIFHVFTKNTGTEVTEGIFLHLDKLEEADW---NL 564

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           +AFSKM  L+LL I NL+L  G +YL N LR L W  YP   LP   Q  +  E+ + YS
Sbjct: 565 EAFSKMCKLKLLYIHNLRLSLGPKYLPNALRFLKWSWYPSISLPPGFQPAELAELSLPYS 624

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
            I  LW GIK+L  LK + LS+S NL R PDFTG P LEKLILEGC  L +IHPS+    
Sbjct: 625 NIDHLWIGIKYLSNLKSIDLSYSTNLTRTPDFTGIPYLEKLILEGCISLVKIHPSIASLK 684

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKF 533
           +L I N ++C S+ +LPG++ M+ LE  +      LK +P  +   K LS L + G    
Sbjct: 685 RLKIWNFRNCKSIKSLPGEVDMEFLETFDVSGCSKLKMIPEFVGQTKRLSRLCLGGT-AV 743

Query: 534 REFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLV-----LLNLKNCRSLEILPVTVS 588
            + P I    E L EL L G  IR  P S  L   L+     L   K+   L  L  ++ 
Sbjct: 744 EKLPSIEHLSESLVELDLSGIVIREQPYSRFLKQNLIASSLGLFPRKSPHPLTPLLASLK 803

Query: 589 NLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
           +   L  LKL+ C+  + + P  + S+  L  L L G +   +P+SI LL+KL  +N+ +
Sbjct: 804 HFSSLTELKLNDCNLCEGELPNDIGSLSSLRRLELRGNNFVSLPASIHLLSKLRYINVEN 863

Query: 648 CKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLG 683
           CK L +LP    + +   ++N + C  L+  P+  G
Sbjct: 864 CKRLQQLPEP--SARGYLSVNTNNCTSLQVFPDLPG 897



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 167/547 (30%), Positives = 257/547 (46%), Gaps = 98/547 (17%)

Query: 579  SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELL 637
            +++ L + +  L  L+S+ LS  + L + P+    +  L +L L+G  S+ ++  SI  L
Sbjct: 625  NIDHLWIGIKYLSNLKSIDLSYSTNLTRTPDFT-GIPYLEKLILEGCISLVKIHPSIASL 683

Query: 638  TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI------------ 685
             +L++ N  +CK++  LP  +  ++ L+T ++SGC KL+ +PE +GQ             
Sbjct: 684  KRLKIWNFRNCKSIKSLPGEV-DMEFLETFDVSGCSKLKMIPEFVGQTKRLSRLCLGGTA 742

Query: 686  -----------ESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK-----------LPS 723
                       ESL ELD+SG  +     +  ++  NL+  S+ L            L S
Sbjct: 743  VEKLPSIEHLSESLVELDLSGIVI-REQPYSRFLKQNLIASSLGLFPRKSPHPLTPLLAS 801

Query: 724  LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIEL 783
            L    SL +L L DCNL EG LP+DIG+L SL+ L L  N+FVSLP SI  LSKL  I +
Sbjct: 802  LKHFSSLTELKLNDCNLCEGELPNDIGSLSSLRRLELRGNNFVSLPASIHLLSKLRYINV 861

Query: 784  EDCKRLQSLPQLPPNIR---QVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKS 840
            E+CKRLQ LP+  P+ R    V  N C SL    D   LC+  +  + C + L  +GN+ 
Sbjct: 862  ENCKRLQQLPE--PSARGYLSVNTNNCTSLQVFPDLPGLCRLLAFRLCCSNCLSTVGNQD 919

Query: 841  LA---FSMLREYLEAVSNTRQHL----------SVVVPGSEIPEWFMYQNEGSSITVTRP 887
             +   +S+L+  +E       H+           +++PGSEIPEWF  Q+ G S+T   P
Sbjct: 920  ASYFIYSVLKRLVEV--GMMVHMPETPRCFPLPELLIPGSEIPEWFNNQSVGDSVTEKLP 977

Query: 888  SNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGS 947
            S+  N  K +G+A+C +     N    +    +  ++ N ++   I     +    Q  S
Sbjct: 978  SDACNYSKWIGFAVCALIGPPDNPSAASRI-LFINYRWNSYVCTPIAYFEVK----QIVS 1032

Query: 948  DHLWLLYLSRQ-----------TCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMC 996
            DHL LL+L  +           TC ++     S    +   H+             +K C
Sbjct: 1033 DHLVLLFLPSEGFRKPENCLEDTCNEVEFVFGSKGGFYSDLHI-------------IKKC 1079

Query: 997  GLHPVYMDEVEELDQTTNQPSRFTVYNLNEFDQHFVGSKMIVATTSKRSLTEYFGAEASG 1056
            G   +Y  +VEEL    NQ S+ +  +LNE      G+ M+ AT           A  SG
Sbjct: 1080 GARALYEHDVEELISKMNQ-SKISSISLNEAVDEQEGA-MVKATQE---------AATSG 1128

Query: 1057 SGCCDDE 1063
             G  DDE
Sbjct: 1129 RGGSDDE 1135


>gi|105922376|gb|ABF81413.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1152

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 301/628 (47%), Positives = 409/628 (65%), Gaps = 27/628 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           +DSR E L   +     +   IGICGMGG+GKTTIARVVYD    +F+ S FL NVR++ 
Sbjct: 174 IDSRVEVLNGFIGEEVGEAIFIGICGMGGIGKTTIARVVYDSFRWQFKGSCFLANVRDVF 233

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           + KGG   LQ QLLS++L +   S+ + + GI+M+  RL+ KK+LL++DDV D KQL+ L
Sbjct: 234 AEKGGPRRLQEQLLSEIL-MERASVCDSYRGIEMIKRRLRLKKILLILDDVNDKKQLEFL 292

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           A    WFG GSRIIITSRD+++   +   ++Y+   LN D+AL LF+ KAFK  QP ++ 
Sbjct: 293 AAEPGWFGPGSRIIITSRDKNVFTGNDDTKIYEAEKLNDDDALMLFSQKAFKNDQPAEDF 352

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V+LS +++ YA GLPLALEV+GSFL GR + EWR  + R+   P  EI+ +L +SFDGL 
Sbjct: 353 VKLSKQVVGYANGLPLALEVIGSFLYGRRIPEWRGAINRMNEIPDDEIIKVLLVSFDGLH 412

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGC-GFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
           ELEKKIFLDIACF KG   D +T  L+G  GFH  IGI VLIE+ LI+V  + +WMH+LL
Sbjct: 413 ELEKKIFLDIACFLKGFKIDRITRILDGWRGFHTGIGIPVLIERSLISVSRDQVWMHNLL 472

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           Q++GQ+I++R+SP+E G+RSRLW  E+VC  L ++TG E +E I LD    +   +   +
Sbjct: 473 QKMGQEIIRRESPDEPGRRSRLWTYEDVCLALMDNTGKEKIEAIFLDMPGIKEAQW---N 529

Query: 359 AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
            KAFSKM+ LRLLKI N+QL  G E LSN LR L W  YP K LP+ LQ+D+ +E++M  
Sbjct: 530 MKAFSKMSRLRLLKIDNMQLSEGPEDLSNNLRFLEWHSYPSKSLPAGLQVDELVELHMAN 589

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           S + +LW G K   KLK++ L++S  L + PD TG PNLE LILEGCT L E+HPSL  H
Sbjct: 590 SNLEQLWYGCKSAVKLKIINLNNSLYLSKTPDLTGIPNLESLILEGCTSLSEVHPSLGRH 649

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
            KL  +N+ +C S+  LP  + M+SL+                  TLD  G  K  +FP+
Sbjct: 650 KKLQYVNLVNCRSIRILPSNLEMESLK----------------FFTLD--GCSKLEKFPD 691

Query: 539 IVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKL 598
           IV +M  L+ LHL+ T I  L  SI  L GL +L++ NCR+LE +P ++  LK L+ L L
Sbjct: 692 IVGNMNQLTVLHLDETGITKLSSSIHHLIGLEVLSMNNCRNLESIPSSIGCLKSLKKLDL 751

Query: 599 SGCSKLKKFPEIVRSMKDLSELFLDGTS 626
           S CS+L+  P+   ++  +  L  DG S
Sbjct: 752 SDCSELQNIPQ---NLGKVESLEFDGLS 776



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/213 (37%), Positives = 130/213 (61%), Gaps = 14/213 (6%)

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSL 580
           L  ++++  L   + P++   + +L  L LEG T++  +  S+     L  +NL NCRS+
Sbjct: 605 LKIINLNNSLYLSKTPDLT-GIPNLESLILEGCTSLSEVHPSLGRHKKLQYVNLVNCRSI 663

Query: 581 EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
            ILP  +  ++ L+   L GCSKL+KFP+IV +M  L+ L LD T I ++ SSI  L  L
Sbjct: 664 RILPSNL-EMESLKFFTLDGCSKLEKFPDIVGNMNQLTVLHLDETGITKLSSSIHHLIGL 722

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS------ 694
           E+L++++C+NL  +PSSI  LKSLK L+LS C +L+N+P+ LG++ESLE   +S      
Sbjct: 723 EVLSMNNCRNLESIPSSIGCLKSLKKLDLSDCSELQNIPQNLGKVESLEFDGLSNPRPGF 782

Query: 695 GTAVPHS--TSWYSYIPINLMRKSVALKLPSLS 725
           G A+P +    W+++        S+++++PS S
Sbjct: 783 GIAIPGNEIPGWFNH---QSKGSSISVQVPSWS 812



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 173/400 (43%), Gaps = 92/400 (23%)

Query: 614 MKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCF 673
           + +L EL +  ++++++    +   KL+++NL++   L + P  +  + +L++L L GC 
Sbjct: 579 VDELVELHMANSNLEQLWYGCKSAVKLKIINLNNSLYLSKTPD-LTGIPNLESLILEGCT 637

Query: 674 KLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKL 733
            L  V  +LG+ + L+                    +NL+       LPS   + SL+  
Sbjct: 638 SLSEVHPSLGRHKKLQY-------------------VNLVNCRSIRILPSNLEMESLKFF 678

Query: 734 NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
            L  C+ +E   P  +GN+  L  L+L +     L +SI HL  L  + + +C+ L+S+P
Sbjct: 679 TLDGCSKLE-KFPDIVGNMNQLTVLHLDETGITKLSSSIHHLIGLEVLSMNNCRNLESIP 737

Query: 794 QLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAV 853
                       GC   +  LD L  C     +   L  ++     SL F       + +
Sbjct: 738 S---------SIGCLKSLKKLD-LSDCSELQNIPQNLGKVE-----SLEF-------DGL 775

Query: 854 SNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF-------- 905
           SN R    + +PG+EIP WF +Q++GSSI+V  PS        +G+  C  F        
Sbjct: 776 SNPRPGFGIAIPGNEIPGWFNHQSKGSSISVQVPS------WSMGFVACVAFSANDESPS 829

Query: 906 ---HVLKNSRGNNCFGSYPTHQ-LNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCY 961
              H   N R N     YP+   ++C               G   SDH+WL YLS    +
Sbjct: 830 LFCHFKANEREN-----YPSPMCISCK--------------GHLFSDHIWLFYLS----F 866

Query: 962 DIRLPLESNLEPFESNHVNVSF---EPWLGQGLEVKMCGL 998
           D    L+       SN + +SF   EP    G++VK CG+
Sbjct: 867 DYLKELQEWQHASFSN-IELSFQSSEP----GVKVKNCGV 901


>gi|359493398|ref|XP_003634586.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1327

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 378/1156 (32%), Positives = 564/1156 (48%), Gaps = 177/1156 (15%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MD R ++L+ L+ S  +D+RM+GI G GG+GKTTIA++VY+ I ++F  + FL +VRE  
Sbjct: 195  MDFRLKELKSLLSSDLNDIRMVGIYGPGGIGKTTIAKIVYNEIQYQFTGASFLQDVRETF 254

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            +KG  + LQ+QLL   +   D    N+  G++++ SRL+ KKVL+VIDDV  ++QL+S+A
Sbjct: 255  NKGYQLQLQQQLLHDTVG-NDVEFSNINKGVNIIKSRLRSKKVLIVIDDVDRLQQLESVA 313

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            G+ +WFG GS IIIT+RD+HLL  +GV   +K   L+Y+EALQLF+  AFK   P ++ V
Sbjct: 314  GSPKWFGPGSTIIITTRDQHLLVEYGVTISHKATALHYEEALQLFSQHAFKQNVPKEDYV 373

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
             LS  +++YA GLPLAL+V+GS L G ++DEW+S  ++L+  P  EI D+L+ISFDGL  
Sbjct: 374  DLSNCMVQYAQGLPLALKVVGSSLQGMTIDEWKSASDKLKKNPMKEINDVLRISFDGLDP 433

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             +K++FLDIACFFKG  +D+V+  L+GC       IRVL ++CL+T+ +N + MHDL+ E
Sbjct: 434  SQKEVFLDIACFFKGECKDFVSRILDGCNLFATCNIRVLHDRCLVTISDNMIQMHDLIHE 493

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHH----------- 349
            +G  IV+ + P +  K SRLW  +++    +     E ++GI L N              
Sbjct: 494  MGWAIVREECPGDPCKWSRLWDVDDIYDAFSRQECLEELKGIDLSNSKQLVKMPKFSSMP 553

Query: 350  -------ENEVYLCASAKAFSKMTNLRLLKICNLQ----LPNGLEYLSNRLRLLGWRGYP 398
                   E    LC    +   + +L  L +   +     P+ +++ S  +  L      
Sbjct: 554  NLERLNLEGCTSLCELHSSIGDLKSLTYLNLAGCEQLRSFPSSMKFESLEVLYLNCCPNL 613

Query: 399  LKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPN-L 457
             KF   +  M+   E+Y+  S I EL   I +L  L+V+ LS+  N  + P   G    L
Sbjct: 614  KKFPEIHGNMECLKELYLNESGIQELPSSIVYLASLEVLNLSNCSNFEKFPKIHGNMKFL 673

Query: 458  EKLILEGCTR-----------------------LYEIHPSLLLHNKLIILNMKDCTSLIT 494
             +L LEGC +                       + E+  S+     L IL++  C+    
Sbjct: 674  RELYLEGCPKFENFPDTFTYMGHLRRLHLRKSGIKELPSSIGYLESLEILDISCCSKFEK 733

Query: 495  LPG-KILMKSLEKLNLKS-----LPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSE 548
             P  +  MK L+ L L+      LP +I  L  L  L +   LKF +F ++  +M  L E
Sbjct: 734  FPEIQGNMKCLKNLYLRKTAIQELPNSIGSLTSLEILSLEKCLKFEKFSDVFTNMGRLRE 793

Query: 549  LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR-------------- 594
            L L  + I+ LP SI  L  L  LNL  C + E  P    N+KCL+              
Sbjct: 794  LCLHRSGIKELPGSIGYLESLENLNLSYCSNFEKFPEIQGNMKCLKELSLENTAIKELPN 853

Query: 595  ---------SLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNL 645
                     SL LSGCS L++FPEI ++M +L  LFLD T+I+ +P S+  LT+L+ LNL
Sbjct: 854  SIGRLQALESLTLSGCSNLERFPEIQKNMGNLWALFLDETAIEGLPYSVGHLTRLDHLNL 913

Query: 646  SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWY 705
             +CKNL  LP+SI  LKSL+ L+L+GC  LE   E    +E LE L +  T +    S  
Sbjct: 914  DNCKNLKSLPNSICELKSLEGLSLNGCSNLEAFSEITEDMEQLERLFLRETGISELPSSI 973

Query: 706  SYI----PINLMRKSVALKLPSLSG--------------------------LCSLRKLNL 735
             ++     + L+     + LP+  G                           C L  L+L
Sbjct: 974  EHLRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSLQCCLTMLDL 1033

Query: 736  TDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQL 795
              CNLME  +PSD+  L  L  L +S+N    +P  IT L KL  + +  C  L+ + +L
Sbjct: 1034 GGCNLMEEEIPSDLWCLSLLVFLNISENRMRCIPAGITQLCKLRTLLINHCPMLEVIGEL 1093

Query: 796  PPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSN 855
            P ++  +  +GC SL T                           S +           S 
Sbjct: 1094 PSSLGWIEAHGCPSLET-------------------------ETSSSLLWSSLLKHLKSP 1128

Query: 856  TRQHLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGN 914
             +Q  ++++PGS  IPEW  +Q  G  ++V  P N Y    L+G+ +   FH +     +
Sbjct: 1129 IQQKFNIIIPGSSGIPEWVSHQRMGCEVSVELPMNWYEDNNLLGFVL--FFHHVPLDDDD 1186

Query: 915  NCF---GSYPTHQLNCHIGHG-----IYGIGF-----------------RDKFGQAGSDH 949
             C    G  P  +L   I HG     +  IGF                 R   G      
Sbjct: 1187 ECVRTSGFIPHCKL--AISHGDQSKRLDDIGFHPHCKTYSISGLSYGSTRYDSGSTSDPA 1244

Query: 950  LWLLYLSRQTCYDIRLPLE------SNLEPFESNHV-NVSFEPWLGQGLEVKMCGLHPVY 1002
            LW+ Y  +     I +P +      +N +    N V N SF        +VK CG+H +Y
Sbjct: 1245 LWVTYFPQ-----IGIPSKYRSRKWNNFKAHFDNPVGNASFTCGENASFKVKSCGIHLIY 1299

Query: 1003 MDEVEELDQTTNQPSR 1018
              + +       QPSR
Sbjct: 1300 AQDQKHWP----QPSR 1311


>gi|359493392|ref|XP_002279365.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1461

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 366/1004 (36%), Positives = 536/1004 (53%), Gaps = 135/1004 (13%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MD   ++++ L+D+ S++V M+GI G+GG+GKTTIA+VVY+ + ++F+   FL+NVRE S
Sbjct: 200  MDGNLKQVKSLIDAQSNEVSMVGIYGIGGIGKTTIAKVVYNDMLYKFKRHSFLENVREKS 259

Query: 61   SKG-GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
              G GL+ LQ +LL  +L   +  + N+  GI+ + S    +KVL+V+DDV   +QL+ L
Sbjct: 260  KGGRGLLELQEKLLCDILMEKNLELRNIDKGIEKIKSECCFEKVLIVLDDVDCPRQLEFL 319

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            A N + F  GS II+T+R++  L  +     Y+  GL  ++A +LF   AF+ + P    
Sbjct: 320  APNSDCFHRGSIIIVTTRNKRCLNVYESYSSYEAKGLAREQAKELFCWNAFRKHHPKDNY 379

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            V LS RI+ YA GLPLAL VLGSFL  R VDEW STL++L+  P  +I  +LQIS+DGL 
Sbjct: 380  VDLSNRILDYAKGLPLALVVLGSFLFQRDVDEWESTLDKLKTNPLEDIQKVLQISYDGLD 439

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
            +  KK+FLDIACFFK  D  +VT  LEGC FHP IG+RVL E+CLI++   T+ MHDLLQ
Sbjct: 440  DKCKKLFLDIACFFKYKDEKFVTRILEGCKFHPKIGLRVLDERCLISITYGTIRMHDLLQ 499

Query: 300  ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
            E+G  IV++  PE  GK SRLW+ +++  V T + GT+ +EGI + N   + +  +  +A
Sbjct: 500  EMGWAIVRQIDPECPGKWSRLWELQDIESVFTRNKGTKNIEGIFI-NRSWDTKKRIQLTA 558

Query: 360  KAFSKMTNLRLLKICN--LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
            +AF KM  LRLL +    +QL    E   + L    W  YPL++LPSN  ++  +E+ + 
Sbjct: 559  EAFRKMNRLRLLIVKGNMVQLSQDFELPCHDLVYFHWDNYPLEYLPSNFHVENLVELNLW 618

Query: 418  YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT----------- 466
            YS I  LW+G     KLKV+ LS+S +L+ +   + APNLE LIL+GCT           
Sbjct: 619  YSNIEHLWEGNMTARKLKVINLSYSMHLVGISSISSAPNLEILILKGCTSNLNGLEKLDL 678

Query: 467  ----RLYEIHPSLLLHNKLIILNMKDCTSLITLPGKIL--MKSLEKL------NLKSLPT 514
                 L  +  S+   + L  LN+ +C+ L+  PG  +  +K+LE L      N++SLP 
Sbjct: 679  GYCKNLLSLPDSIFSLSSLQTLNLFECSKLVGFPGINIGSLKALEYLDLSYCENIESLPN 738

Query: 515  TISGLKCLSTLDVSGDLKFREFPEI-VEHMEHLSELHLEG-TAIRGLP-LSIELLSGLVL 571
             I     L TL + G  K + FP+I +     L  L L G + ++G P ++I  L  L L
Sbjct: 739  NIGSFSSLHTLSLMGCSKLKGFPDINIGSFSSLHTLSLMGCSKLKGFPDINIGSLKALQL 798

Query: 572  LNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP 631
            L+   CR+LE LP  + +L  L +L L GCSKLK FP+I                     
Sbjct: 799  LDFSRCRNLESLPNNIGSLSSLHTLLLVGCSKLKGFPDI--------------------- 837

Query: 632  SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV-----------PE 680
             +   L  L+LL+ S C+NL  LP SI  L SLKTL ++ C KLE +           P 
Sbjct: 838  -NFGSLKALQLLDFSRCRNLESLPMSIYNLSSLKTLRITNCPKLEEMLEIELGVDWPLPP 896

Query: 681  TLGQI---------------ESLEELDISGTAVPHSTSWYSYIPINLMRKSVAL------ 719
            T   I               E+L++     + V  S   +  +  +++  S  L      
Sbjct: 897  TTSHISNSAIIWYDGCFSSLEALKQKCPLSSLVELSVRKFYGMEKDILSGSFHLSSLKIL 956

Query: 720  ---KLPSLSG--------LCSLRKLNLT-------------------------DCNLMEG 743
                 PS++G        L SL KL+LT                         DCNLMEG
Sbjct: 957  SLGNFPSMAGGILDKIFHLSSLVKLSLTKCKPTEEGIPSDIRNLSPLQQLSLHDCNLMEG 1016

Query: 744  ALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR 803
             + + I +L SL+EL+L  N F S+P  I+ LS L  ++L  CK LQ +P+LP ++R + 
Sbjct: 1017 KILNHICHLTSLEELHLGWNHFSSIPAGISRLSNLKALDLSHCKNLQQIPELPSSLRFLD 1076

Query: 804  VNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVV 863
             + C+  ++   +L    S   M+ C  S      +     ++  Y     N    + +V
Sbjct: 1077 AH-CSDRISSSPSLLPIHS---MVNCFKS------EIEDCVVIHRYSSFWGNG---IGIV 1123

Query: 864  VP-GSEIPEWFMYQNEGS-SITVTRPSNLYNKKKLVGYAICCVF 905
            +P  S I EW  Y+N G   +T+  P N Y    L G+A+CCV+
Sbjct: 1124 IPRSSGILEWITYRNMGGHKVTIELPPNWYENDDLWGFALCCVY 1167


>gi|297740941|emb|CBI31253.3| unnamed protein product [Vitis vinifera]
          Length = 1426

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 329/884 (37%), Positives = 507/884 (57%), Gaps = 84/884 (9%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MD   ++L+ L+ S S D+ ++GI G GG+GKTTIA++VY+ I ++F ++ FL +VRE  
Sbjct: 219  MDFHLKELKSLLSSDSHDISVVGIYGTGGIGKTTIAKIVYNEIQYQFTSASFLQDVRETF 278

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            +K   + LQ+QLL   +   D    N+  GID++ +RL  KKVL+VIDDV +++QL+S+A
Sbjct: 279  NKRCQLQLQQQLLHDTVG-DDEEFRNINKGIDIIKARLSSKKVLIVIDDVDELEQLESVA 337

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            G+ +WFG GS IIIT+R+ HLL  +     Y+  GL+Y EALQLF+  AFK   P ++ V
Sbjct: 338  GSPKWFGPGSTIIITTRNRHLLVEYEATISYEATGLHYREALQLFSRHAFKQNDPKEDYV 397

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
             LS  +++YA GLPLAL+VLGS L G ++++W S L +L+     +I D+L+IS DGL  
Sbjct: 398  DLSNCMVQYAQGLPLALKVLGSSLRGMTIEQWESALNKLKTNLNKKINDVLRISLDGLDY 457

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             +K++FLDIACFFKG   D+V+  L  C   P I I+ L ++CL+T+ +N + MHDL+QE
Sbjct: 458  SQKEVFLDIACFFKGECEDFVSRILYDCKLDPKINIKNLHDRCLVTIRDNVIQMHDLIQE 517

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G  IV+ + P +  K SRLW  +++ +  +   G E ++ I LD      E+    S +
Sbjct: 518  MGYAIVREECPRDPHKWSRLWDADDIYNAFSRREGMENIQTISLD-LSRSKEIQF--STE 574

Query: 361  AFSKMTNLRLLKI-CN-----------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQM 408
             F+ M  LRLLKI CN           + LP   E+  + LR + W+   L+ LPS+   
Sbjct: 575  VFATMKQLRLLKIYCNDRDGLTREEYRVHLPKDFEF-PHDLRYIHWQRCTLRSLPSSFCG 633

Query: 409  DKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
            ++ IEI +  S I  LWKG K L+KLK + LS+S+ L++MP+F+  PNLE+L LEGCT L
Sbjct: 634  EQLIEINLKSSNIKRLWKGNKRLEKLKGIDLSNSKQLVKMPEFSSMPNLERLNLEGCTSL 693

Query: 469  YEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL--------------------- 507
             E+H S+    +L  LN++ C  L + P  +  +SLE L                     
Sbjct: 694  CELHSSIGDLKQLTYLNLRGCEQLQSFPTNMKFESLEVLCLNQCRKLKKIPKILGNMGHL 753

Query: 508  --------NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGL 559
                     +K LP +I  L+ L  LD+S   KF +FPEI  +M+ L  L L+ TAI+ L
Sbjct: 754  KKLCLNGSGIKELPDSIGYLESLEILDLSNCSKFEKFPEIRGNMKCLKRLSLDETAIKEL 813

Query: 560  PLSIEL------------------------LSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
            P SI                          +  L++LNL+    ++ LP ++  L+ L  
Sbjct: 814  PNSIGSLTSLELLSLRKCSKFEKFSDVFTNMRRLLILNLRES-GIKELPGSIGCLEFLLQ 872

Query: 596  LKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
            L LS CSK +KFPEI  +MK L  L LD T+IKE+P+SI  +T LE+L+L  C    +  
Sbjct: 873  LDLSYCSKFEKFPEIRGNMKRLKRLSLDETAIKELPNSIGSVTSLEILSLRKCSKFEKFS 932

Query: 656  SSIIALKSLKTLNL--SGCFKLENVPETLGQIESLEELDISGTAVPHSTS---W-YSYIP 709
                 ++ L+ LNL  SG   ++ +P ++G +ESL +LD+S  +     S   W   ++ 
Sbjct: 933  DVFTNMRHLQILNLRESG---IKELPGSIGCLESLLQLDLSNCSKFEKFSEIQWNMKFLR 989

Query: 710  INLMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSL 768
            +  ++ +   +LP S+  L  L  L+L  C+ +E  LP    ++ +L+ L L+  +   L
Sbjct: 990  VLYLKHTTIKELPNSIGCLQDLEILDLDGCSNLE-RLPEIQKDMGNLRALSLAGTAIKGL 1048

Query: 769  PTSITHLSKLLNIELEDCKRLQSLPQLP--PNIRQVRVNGCASL 810
            P SI + + L ++ LE+C+ L+SLP +    +++ + + GC++L
Sbjct: 1049 PCSIRYFTGLHHLTLENCRNLRSLPDICGLKSLKGLFIIGCSNL 1092



 Score =  193 bits (490), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 193/629 (30%), Positives = 283/629 (44%), Gaps = 98/629 (15%)

Query: 356  CASAKAFSKM-TNLRLLKICNL------QLPNGLEYLSNRLRL-LGWRGYPLKFLPSNLQ 407
            C+  + FS + TN+R L I NL      +LP  +  L   L+L L +     KF      
Sbjct: 831  CSKFEKFSDVFTNMRRLLILNLRESGIKELPGSIGCLEFLLQLDLSYCSKFEKFPEIRGN 890

Query: 408  MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPNLEKLILEGCT 466
            M +   + +  + I EL   I  +  L+++ L       +  D FT   +L+ L L   +
Sbjct: 891  MKRLKRLSLDETAIKELPNSIGSVTSLEILSLRKCSKFEKFSDVFTNMRHLQILNLRE-S 949

Query: 467  RLYEIHPSLLLHNKLIILNMKDCT-----SLITLPGKIL-MKSLEKLNLKSLPTTISGLK 520
             + E+  S+     L+ L++ +C+     S I    K L +  L+   +K LP +I  L+
Sbjct: 950  GIKELPGSIGCLESLLQLDLSNCSKFEKFSEIQWNMKFLRVLYLKHTTIKELPNSIGCLQ 1009

Query: 521  CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL 580
             L  LD+ G       PEI + M +L  L L GTAI+GLP SI   +GL  L L+NCR+L
Sbjct: 1010 DLEILDLDGCSNLERLPEIQKDMGNLRALSLAGTAIKGLPCSIRYFTGLHHLTLENCRNL 1069

Query: 581  EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
              LP  +  LK L+ L + GCS L+ F EI   M+ L  L L  T I E+PSSIE L  L
Sbjct: 1070 RSLP-DICGLKSLKGLFIIGCSNLEAFSEITEDMEQLKRLLLRETGITELPSSIEHLRGL 1128

Query: 641  ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
            + L L +CKNLV LP SI +L  L  L +  C KL N+P+ L                  
Sbjct: 1129 DSLELINCKNLVALPISIGSLTCLTILRVRNCTKLHNLPDNLR----------------- 1171

Query: 701  STSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
                       L R+              L KL+L  CNLMEG +PSD+  L SL+ LY+
Sbjct: 1172 ----------GLRRR--------------LIKLDLGGCNLMEGEIPSDLWCLSSLESLYV 1207

Query: 761  SKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLC 820
            S+N    +P  IT L KL  + +  C  L+ + +LP ++  +   GC             
Sbjct: 1208 SENHIRCIPAGITQLFKLKTLNMNHCPMLKEIGELPSSLTYMEARGC------------- 1254

Query: 821  KSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNT-RQHLSVVVPGSE-IPEWFMYQNE 878
                    CL++     +  L  S+L+ +  A+ +T       V+PGS  IPEW  +Q  
Sbjct: 1255 -------PCLETETF--SSPLWSSLLKYFKSAIQSTFFGPRRFVIPGSSGIPEWVSHQRI 1305

Query: 879  GSSITVTRPSNLYNKKKLVGYAICCVFH--VLKNSRGNNCFGSYPTHQLNCHIGHGIYGI 936
            G  + +  P N Y     +G+ +   FH   L N       GS    +L   I HG    
Sbjct: 1306 GCEVRIELPMNWYEDNNFLGFVL--FFHHVPLDNDECETTEGSTAHCELT--ISHG---- 1357

Query: 937  GFRDKFGQAGSDHLWLLYLSRQTCYDIRL 965
               D+  +   +++W  Y   +TCY   L
Sbjct: 1358 ---DQSERL--NNIW-FYPESKTCYSYDL 1380


>gi|255547496|ref|XP_002514805.1| ATP binding protein, putative [Ricinus communis]
 gi|223545856|gb|EEF47359.1| ATP binding protein, putative [Ricinus communis]
          Length = 1097

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 326/758 (43%), Positives = 455/758 (60%), Gaps = 60/758 (7%)

Query: 1   MDSRCEKLRFLMDSGS-SDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           M+SR  ++   +D G   DV+ IGICGMGG+GKTTIAR V++ +S +FE S FL NVRE+
Sbjct: 192 MNSRLVEMSMCLDMGQLDDVQFIGICGMGGIGKTTIARFVHEELSSQFEGSSFLANVREV 251

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVI-DDVVDVKQLQS 118
             K GLV LQ+QLLS++L   + +I N F G+  + +RL  K+VL +I DDV  + QL+ 
Sbjct: 252 EEKRGLVHLQKQLLSEILLDRNITICNAFGGMTEISNRLAHKRVL-IILDDVNQLDQLKM 310

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           LAG  +WFG GSRII+TSRDEHLLK HGVD++Y+  GL  DEAL LF +KAF+   P+++
Sbjct: 311 LAGMHDWFGKGSRIIVTSRDEHLLKCHGVDKIYRVEGLGRDEALHLFCLKAFRNDHPIED 370

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
            ++LS + + Y  GLPLAL+V GSFL G+S+ EWRS L+RL+  P  EILD L ISFDGL
Sbjct: 371 FLELSNQFVNYCNGLPLALDVFGSFLFGKSLSEWRSALDRLKEIPNQEILDKLNISFDGL 430

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
           +E+EKK+FLDIACFF G DRDYV   L+ CG +P  GI VL+ K LIT+    +WMHDLL
Sbjct: 431 EEMEKKLFLDIACFFNGEDRDYVYEVLDSCGLYPDFGISVLVSKSLITISKERIWMHDLL 490

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           QELG+ IV+R+S EE GKRSRLW  +++ HVL+  TGTE +E IVLD+   E+E     S
Sbjct: 491 QELGRDIVRRESQEEPGKRSRLWLYKDIRHVLSNDTGTEQIEAIVLDSCEQEDEQL---S 547

Query: 359 AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
           AK F  M  LRLLK+ NL L  GLEYLSN+LR L W  YP KFLPS+ Q D+  E++M  
Sbjct: 548 AKGFMGMKRLRLLKLRNLHLSQGLEYLSNKLRYLEWDRYPFKFLPSSFQPDELTELHMRC 607

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           S +  LWKGIK L  LKV+ LS+S NL++  DF   PNLE L LEGCTRL+E+H SL + 
Sbjct: 608 SIMERLWKGIKPLKMLKVIDLSYSVNLLKTMDFKDVPNLESLNLEGCTRLFEVHQSLGIL 667

Query: 479 NKLII------------------------LNMKDCTSL-ITLPGKILMKSLEKLNLK--- 510
           N+L +                        L  K+   L +TLP   +++SL+ L+L    
Sbjct: 668 NRLKLNVGGIATSQLPLAKLWDFLLPSRFLPWKNQNPLAVTLPSLSVLRSLKSLDLSYCN 727

Query: 511 ----SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHL-EGTAIRGLPLSIEL 565
               +LP  +S    L T ++SG+  F   P  +  +  L +    +   ++  P    L
Sbjct: 728 LMEGALPNDLSCFPMLKTFNLSGN-DFFSIPSSISRLTKLEDFRFADCKRLQAFP---NL 783

Query: 566 LSGLVLLNLKNCRSLE-ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG 624
            S ++ L++  C  L+ +LP  +S    L +L +  C +L+  P +  S+  LS   +DG
Sbjct: 784 PSSILYLSMDGCTVLQSLLPRNISRQFKLENLHVEDCKRLQLSPNLSSSILHLS---VDG 840

Query: 625 TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQ 684
            + +E  +S         L   +C  L+ + S   +  + + L     + L +  + L  
Sbjct: 841 LTSQETQTS-----NSSSLTFVNCLKLIEVQSEDTS--AFRRLTSYLHYLLRHSSQGLFN 893

Query: 685 IESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
             S   + ++G  +P    W++Y  +     S+ L+LP
Sbjct: 894 PSSQISICLAGNEIP---GWFNYQSVG---SSLKLQLP 925



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 211/462 (45%), Gaps = 90/462 (19%)

Query: 616  DLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
            +L+EL +  + ++ +   I+ L  L++++LS   NL++       + +L++LNL GC +L
Sbjct: 599  ELTELHMRCSIMERLWKGIKPLKMLKVIDLSYSVNLLK-TMDFKDVPNLESLNLEGCTRL 657

Query: 676  ENVPETLGQIESLEELDISGTA---VPHSTSWYSYIPINLM----RKSVALKLPSLSGLC 728
              V ++LG +  L+ L++ G A   +P +  W   +P   +    +  +A+ LPSLS L 
Sbjct: 658  FEVHQSLGILNRLK-LNVGGIATSQLPLAKLWDFLLPSRFLPWKNQNPLAVTLPSLSVLR 716

Query: 729  SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLL--------- 779
            SL+ L+L+ CNLMEGALP+D+     LK   LS N F S+P+SI+ L+KL          
Sbjct: 717  SLKSLDLSYCNLMEGALPNDLSCFPMLKTFNLSGNDFFSIPSSISRLTKLEDFRFADCKR 776

Query: 780  -------------------------------------NIELEDCKRLQSLPQLPPNIRQV 802
                                                 N+ +EDCKRLQ  P L  +I  +
Sbjct: 777  LQAFPNLPSSILYLSMDGCTVLQSLLPRNISRQFKLENLHVEDCKRLQLSPNLSSSILHL 836

Query: 803  RVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYL--------EAVS 854
             V+G  S  T         S  T + CL  +++    + AF  L  YL        + + 
Sbjct: 837  SVDGLTSQETQTSN----SSSLTFVNCLKLIEVQSEDTSAFRRLTSYLHYLLRHSSQGLF 892

Query: 855  NTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGN 914
            N    +S+ + G+EIP WF YQ+ GSS+ +  P   +   K +G+AI  VF   ++    
Sbjct: 893  NPSSQISICLAGNEIPGWFNYQSVGSSLKLQLPP-FWWTNKWMGFAISIVFESQESQTDT 951

Query: 915  NC----FGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQ--TCYDIRLPLE 968
            +       +      +  +G  I  I  +D      SD LW  Y+ R   TC D+     
Sbjct: 952  SAILCDLHACIAEDQDLFLGSSIVHIS-KDS-SNITSDQLWFNYMPRSSLTCLDM----- 1004

Query: 969  SNLEPFES-NHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEEL 1009
                 +E+ NH+ V+F       L VK CG   ++  +++EL
Sbjct: 1005 -----WEACNHLKVTFS---SDRLRVKHCGFRAIFSRDIDEL 1038


>gi|332330344|gb|AEE43930.1| TIR-NBS-LRR resistance protein muRdr1F [Rosa multiflora]
          Length = 1161

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 302/694 (43%), Positives = 419/694 (60%), Gaps = 21/694 (3%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD + E +  L+D  ++DVR IGI GMGGLGKTT+ARVVY+ ISH F+   FL N+RE+S
Sbjct: 199 MDIKLEDIYDLLDEEANDVRFIGIWGMGGLGKTTLARVVYEEISHRFDVRVFLANIREVS 258

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +  GLV LQ+Q+LSQ+LK  +  +W+V+ GI M    L  K VLLV+DDV   +QL+ L 
Sbjct: 259 ATHGLVYLQKQILSQILKEENVKVWDVYSGITMTKRCLCNKAVLLVLDDVDQSEQLEHLV 318

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G ++WFG  SRIIIT+R+  +L THGV++ Y+   LN DEALQLF+ KAF+  +P ++  
Sbjct: 319 GEKDWFGLRSRIIITTRNLRVLVTHGVEKPYELKRLNKDEALQLFSWKAFRKCEPEEDNA 378

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +L    + YAGGLPLAL+ LGSFL  RS+  W S L++L+  P   + +IL++SFDGL E
Sbjct: 379 ELCKSFVTYAGGLPLALKTLGSFLYKRSLHSWSSALQKLQQTPNRSVFEILKLSFDGLDE 438

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQ 299
           +EKKIFLDIACF +  D + +   +    F P I I VL+EK L+T+  +N + +HDL+ 
Sbjct: 439 MEKKIFLDIACFRRLYDNESMIEQVHSFDFCPRITIDVLVEKSLLTISSDNRVDVHDLIH 498

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G +IV RQ  +E G RSRL    ++ HV T++TGTE +EGI+L     E   +   + 
Sbjct: 499 EMGCEIV-RQENKEPGGRSRLCLRNDIFHVFTKNTGTEAIEGILLHLAELEEADW---NL 554

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           +AFSKM  L+LL I NL+L  G  YL N LR L W  YP K LP   Q DK  E+ + +S
Sbjct: 555 EAFSKMCKLKLLYIHNLRLSLGPIYLPNALRFLNWSWYPSKSLPPCFQPDKLTELSLVHS 614

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
            I  LW G K+L  LK + LS S NL R PDFTG PNLEKLILEGC  L +IHPS+    
Sbjct: 615 NIDHLWNGKKYLGNLKSIDLSDSINLTRTPDFTGIPNLEKLILEGCISLVKIHPSIASLK 674

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKF 533
           +L I N ++C S+ +LP ++ M+ LE  +      LK +P  +   K LS L + G    
Sbjct: 675 RLKIWNFRNCKSIKSLPSEVNMEFLETFDVSGCSKLKMIPEFVGQTKTLSKLCIGGS-AV 733

Query: 534 REFPEIVEHM-EHLSELHLEGTAIRGLPLSIEL-----LSGLVLLNLKNCRSLEILPVTV 587
              P   E + E L EL L G  IR  P S+ L     +S   L   K+   L  L  ++
Sbjct: 734 ENLPSSFERLSESLVELDLNGIVIREQPYSLFLKQNLRVSFFGLFPRKSPCPLTPLLASL 793

Query: 588 SNLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLS 646
            +   L  LKL+ C+  + + P  +  +  L  L L G +   +P+SI LL+KL+ +N+ 
Sbjct: 794 KHFSSLTQLKLNDCNLCEGEIPNDIGYLSSLELLQLIGNNFVNLPASIHLLSKLKRINVE 853

Query: 647 DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
           +CK L +LP  + A   L+ +    C  L+  P+
Sbjct: 854 NCKRLQQLP-ELPATDELRVVT-DNCTSLQVFPD 885



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 158/563 (28%), Positives = 242/563 (42%), Gaps = 128/563 (22%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
            L+S+ LS    L + P+    + +L +L L+G  S+ ++  SI  L +L++ N  +CK++
Sbjct: 629  LKSIDLSDSINLTRTPDFT-GIPNLEKLILEGCISLVKIHPSIASLKRLKIWNFRNCKSI 687

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPIN 711
              LPS +  ++ L+T ++SGC KL+ +PE +GQ ++L +L I G+AV +  S +  +  +
Sbjct: 688  KSLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQTKTLSKLCIGGSAVENLPSSFERLSES 746

Query: 712  LM-------------------------------RKSVALKLP---SLSGLCSLRKLNLTD 737
            L+                               RKS     P   SL    SL +L L D
Sbjct: 747  LVELDLNGIVIREQPYSLFLKQNLRVSFFGLFPRKSPCPLTPLLASLKHFSSLTQLKLND 806

Query: 738  CNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPP 797
            CNL EG +P+DIG L SL+ L L  N+FV+LP SI  LSKL  I +E+CKRLQ LP+LP 
Sbjct: 807  CNLCEGEIPNDIGYLSSLELLQLIGNNFVNLPASIHLLSKLKRINVENCKRLQQLPELPA 866

Query: 798  NIR-QVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAF------------- 843
                +V  + C SL    D   L +     ++ ++  + +GN+   +             
Sbjct: 867  TDELRVVTDNCTSLQVFPDPPNLSRCPEFWLSGINCFRAVGNQGFRYFLYSRLKQLLEVL 926

Query: 844  --------------------SMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSIT 883
                                +M+   ++    +  +  +V+PGSEIPEWF  Q+ G S+ 
Sbjct: 927  SLSLCLSLPPSLPPLSLSLVNMMVCMVQETPWSLYYFRLVIPGSEIPEWFNNQSVGDSVI 986

Query: 884  VTRPSNLYNKKKLVGYAICC-------------VFHVLKNSRGNNCFGSYPTHQLNCHIG 930
               PS   N  K +G A+C              V H+   +R   C+        NC  G
Sbjct: 987  EKLPSYACN-SKWIGVALCFLIVPQDNPSAVPEVRHLDPFTRVFCCWNK------NCS-G 1038

Query: 931  HGIYGIGFRDKFGQAGSDHLWLLYLSR----------QTCYDIRLPLESNLEPFESNHVN 980
            H         +  Q  SDHL  + L +           TC +I+     +     S    
Sbjct: 1039 HS----RLVTRVKQIVSDHLLFVVLPKFIWKPQNCPEDTCTEIKFVFVVDQTVGNS---- 1090

Query: 981  VSFEPWLGQGLEVKMCGLHPVYMDEVEELDQTTNQPSRFTVYNLNEFDQHFVGSKMIVAT 1040
                    +GL+VK CG   +Y  + EEL    NQ    ++    E      G+ M+ AT
Sbjct: 1091 --------RGLQVKKCGARILYEHDTEELISKMNQSKSSSISLYEEAVDEQEGA-MVKAT 1141

Query: 1041 TSKRSLTEYFGAEASGSGCCDDE 1063
                       A  S SG  DDE
Sbjct: 1142 QE---------ASTSRSGGSDDE 1155


>gi|298205188|emb|CBI17247.3| unnamed protein product [Vitis vinifera]
          Length = 1027

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 381/1105 (34%), Positives = 558/1105 (50%), Gaps = 177/1105 (16%)

Query: 1    MDSRC-EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            MDS   E +R L     +DVR+IGICG+GG+GKTTIA+VVY+  SHEFE   FL+NVRE+
Sbjct: 58   MDSHVNEIIRRLCVDQLNDVRIIGICGIGGMGKTTIAKVVYNRFSHEFEYMSFLENVREV 117

Query: 60   SSKGGLVSLQRQLLSQLLKLADN-SIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
             +  G   LQ Q L  LL++  N ++ NV  G + + + L+ K+V +V+DD+    QL+ 
Sbjct: 118  GNTMGSHHLQNQFLCDLLQVERNQNVSNVGQGANTIKNVLRCKRVFIVLDDIDHSNQLEY 177

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            L  NR+W G GSR+IIT+R++HLL+    D+VY+   LN  +A +LF++ AF+   P Q+
Sbjct: 178  LLRNRDWLGRGSRVIITTRNKHLLQE--TDDVYEVEELNSKQARELFSLFAFRQNLPKQD 235

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             + LS R++ Y  GLPLAL+VLGSFL  +++ +W S L +LE E    I D+L++S+DGL
Sbjct: 236  FIDLSDRVVNYCHGLPLALKVLGSFLFNKAIPQWESELSKLERELEVGISDVLKVSYDGL 295

Query: 239  QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
               +++IFLDIAC FKG D+D+V+  L+GC F+   GIR L +KCLI++  N + MHDL+
Sbjct: 296  DYTQQEIFLDIACCFKGKDKDFVSRILDGCNFYAERGIRALCDKCLISLSENKILMHDLI 355

Query: 299  QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
            Q++G  I++ +   +  K  RLW   ++C       G + VE I LD         L  S
Sbjct: 356  QQMGWNIIRSEYLGDPTKWRRLWDPSDICRAF-RMGGMKNVEAIFLD---LSRSTPLEVS 411

Query: 359  AKAFSKMTNLRLLKICN------------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNL 406
             K F+KM  LRLLKI +            + LP   ++ ++ LR L W GYP K LPSN 
Sbjct: 412  TKIFAKMKKLRLLKIYSSGYYGTMEKQLKVILPEDFQFPAHELRYLHWEGYPFKSLPSNF 471

Query: 407  QMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
                 IE+ M  S I +L +  + L++LK + LS S  L     F+  PNLE LIL  CT
Sbjct: 472  LGVNLIELNMKDSNIKQLMQRNERLEQLKFLNLSGSRQLTET-SFSNMPNLETLILADCT 530

Query: 467  RLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI-LMKSLEKLNLKSLPTTISGLKCLSTL 525
             L  + PS+    KL +LN+  C +L +LP  I  + SLE +NL     T S L+     
Sbjct: 531  SLNVVDPSIGDLKKLTVLNLLGCENLTSLPSSIQYLDSLEAMNL----MTCSNLE----- 581

Query: 526  DVSGDLKFREFPEIV-EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
                     EFPE+    M+ LS+L L+G  I+ LP SIELL+ L  L L  C++L  LP
Sbjct: 582  ---------EFPEMKGSPMKALSDLLLDGCGIKELPSSIELLTRLKRLYLSKCKNLRSLP 632

Query: 585  VTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLN 644
             ++  LK L  L L GCS L  FPEI+  MK L  L +  + IKE+PSSI+ L  L  L+
Sbjct: 633  SSICRLKSLVQLDLHGCSNLDTFPEIMEDMKCLESLDIRSSGIKELPSSIQNLKSLLRLD 692

Query: 645  LSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSW 704
            +S+C  LV LP SI  L+S   + L GC  LE  P+      S+ +LD S          
Sbjct: 693  MSNC--LVTLPDSIYNLRS---VTLRGCSNLEKFPKNPEGFYSIVQLDFS---------- 737

Query: 705  YSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNS 764
                                             CNLMEG++P++I +L SL+ L LS N 
Sbjct: 738  --------------------------------HCNLMEGSIPTEIWDLNSLEILNLSWNH 765

Query: 765  FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDS 824
             VS+P+ I+ L KL  +++  C+ LQ +P+LP ++R++            DAL       
Sbjct: 766  MVSIPSGISQLCKLDFLDISHCEMLQDIPELPSSLRKI------------DAL------- 806

Query: 825  TMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLS-------VVVPGSEIPEWFMYQN 877
                C     L    SL +S L ++    SN  +HL+       +++    IP W ++Q 
Sbjct: 807  ---YCTKLEMLSSPSSLLWSSLLKWFNPTSN--EHLNCKEGKMIIILGNGGIPGWVLHQE 861

Query: 878  EGSSITVTRPSNLYNKKKLVGYAICCVF----HVLKNSRGNNCFGSYPTHQL---NCHIG 930
             GS + +  P N Y     +G+A   ++    H    SR +      P   +   N H  
Sbjct: 862  IGSQVRIEPPLNWYEDDHFLGFAFFTLYRDYAHCTIPSRFSLRLRGDPDEVVGDCNDHND 921

Query: 931  HGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPW---- 986
              I+     ++     SD LW+    +       +P + + +           +PW    
Sbjct: 922  SRIWNWCECNRCYDDASDGLWVTLYPKNA-----IPNKYHRK-----------QPWHFLA 965

Query: 987  LGQGLEVKMCGLHPVYMDEVEELDQTTNQPSRFTVYNLNEFDQHFVGSKMIVATTSKRSL 1046
                  +K CG+  +Y                      +++  H V    ++A   K   
Sbjct: 966  AVDATNIKRCGVQLIYT---------------------HDYLHHNVP---MLADHQK--- 998

Query: 1047 TEYFGAEASGSGCCDDEEPQPKRFR 1071
                G + +G    DD+EP PKR R
Sbjct: 999  ----GHDDAGENQADDQEPHPKRLR 1019


>gi|224127754|ref|XP_002329169.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870950|gb|EEF08081.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1125

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 350/927 (37%), Positives = 493/927 (53%), Gaps = 130/927 (14%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +D+R +K+  L+   S DVR++GI GMGG+GKTTIA+ VYD +S +FE   F+ NVRE  
Sbjct: 194  IDARIKKVETLLKMESQDVRIVGIWGMGGIGKTTIAKAVYDNVSAQFEGFLFVANVREEI 253

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFD---GIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
             +  +V LQ+ +L +LL   D  I N      G   +  RL RKKVL+V+DDV   +QL+
Sbjct: 254  KRHSVVGLQKNILPELL---DQDILNTGPLSFGNAFVMDRLLRKKVLIVLDDVDSSRQLE 310

Query: 118  SLAGNREW-FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
             L       FG GS+I++TSRD+ +L T+ VDE+Y    LN+ EALQLFNMKAFK Y P 
Sbjct: 311  ELLPEPHVSFGPGSKILLTSRDKQVL-TNVVDEIYDVERLNHHEALQLFNMKAFKNYNPT 369

Query: 177  QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
             +  +L  +I+ YA G PLAL VLGS L GRS +EW S L +L      EI ++L+IS+D
Sbjct: 370  IDHSELVEKIVDYAQGNPLALIVLGSALYGRSKEEWCSVLNKLGKVSSREIQNVLRISYD 429

Query: 237  GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
            GL + +++IFLD+A FF G +RD VT  L+GC     + I VL EK LIT    T+ MHD
Sbjct: 430  GLDDEQQEIFLDLAFFFNGANRDRVTKILDGCYSAACLDISVLFEKSLITTPGCTVNMHD 489

Query: 297  LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
             L+E+   IV+ +S    GKRSRL   E+V   L +  GTE VEGI LD      E++L 
Sbjct: 490  SLREMAFSIVREESKIP-GKRSRLCDPEDVYQALVKKKGTEAVEGICLD-ISESREMHL- 546

Query: 357  ASAKAFSKMTNLRLLKICN---------------LQLPN-GLEYLSNRLRLLGWRGYPLK 400
              + AFS+M  LR+LK  N               + LP+ GL+YLS+ LR L W G+PLK
Sbjct: 547  -KSDAFSRMDRLRILKFFNHFSLDEIFIMDNKDKVHLPHSGLDYLSDELRYLHWDGFPLK 605

Query: 401  FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
             LP +   +  +E+    S+I +LW G++ L  L+ M LS S  L+ +PD + A N+E +
Sbjct: 606  TLPQSFCAENIVELIFPDSKIEKLWTGVQDLVHLRRMDLSGSPYLLEIPDLSMAENIESI 665

Query: 461  ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLK 520
             L+ C  L E++PS+    KL +L +  C                  NL+SLP+ I    
Sbjct: 666  NLKFCKSLIEVNPSIQYLTKLEVLQLSYCD-----------------NLRSLPSRI---- 704

Query: 521  CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL 580
                                            G+ +            L +L+L +C ++
Sbjct: 705  --------------------------------GSKV------------LRILDLYHCINV 720

Query: 581  EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
             I P    N   LR + L  C+ + KFPEI  ++K    L+L GT+I+EVPSSIE LT L
Sbjct: 721  RICPAISGNSPVLRKVDLQFCANITKFPEISGNIK---YLYLQGTAIEEVPSSIEFLTAL 777

Query: 641  ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
              L +++CK L  +PSSI  LKSL+ L LSGC KLEN PE +  +ESL  L++  TA+  
Sbjct: 778  VRLYMTNCKQLSSIPSSICKLKSLEVLGLSGCSKLENFPEIMEPMESLRRLELDATAIKE 837

Query: 701  STSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
              S   Y     ++    LKL    G+ ++ +L+            S I  L SL  L L
Sbjct: 838  LPSSIKY-----LKFLTQLKL----GVTAIEELS------------SSIAQLKSLTHLDL 876

Query: 761  SKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLC 820
               +   LP+SI HL  L +++L     ++ LP+LP ++  + VN C SL TL       
Sbjct: 877  GGTAIKELPSSIEHLKCLKHLDLSGTG-IKELPELPSSLTALDVNDCKSLQTLSRFNLRN 935

Query: 821  KSDSTMIAC--LDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNE 878
              +     C  LD  KL+ +       ++  +++     +   +V+P SEIP WF  QN 
Sbjct: 936  FQELNFANCFKLDQKKLMAD-------VQCKIQSGEIKGEIFQIVLPKSEIPPWFRGQNM 988

Query: 879  GSSITVTRPSNLYNKKKLVGYAICCVF 905
            GSS+T   P N +  K   G A C VF
Sbjct: 989  GSSVTKKLPLNCHQIK---GIAFCIVF 1012


>gi|399920201|gb|AFP55548.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1115

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 292/669 (43%), Positives = 426/669 (63%), Gaps = 19/669 (2%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD++ E++  L+D  ++DVR IGI GMGG+GKTT+AR+VY+ ISH+FE   FL NVRE+S
Sbjct: 199 MDTKLEEIDVLLDKEANDVRFIGIWGMGGMGKTTLARLVYENISHQFEVCIFLANVREVS 258

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +  GLV LQ+Q+LSQ+ K  +  +W+V+ GI  +      K+VLLV+DDV   +QL++L 
Sbjct: 259 ATHGLVHLQKQILSQIFKEENVQVWDVYSGITRIKRCFWNKEVLLVLDDVDQSEQLENLV 318

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G ++WFG  SRIIIT+R+ H+L THG+++ Y+  GL  DEALQLF+ KAF+ Y+P ++  
Sbjct: 319 GEKDWFGLRSRIIITTRNRHVLVTHGIEKPYELKGLKVDEALQLFSWKAFRNYEPEEDFA 378

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           + S   +RYAGGLPLAL++LGSFL  RS+D W S+ ++L+  P   + +IL++SFDGL +
Sbjct: 379 EESKSFVRYAGGLPLALKILGSFLYKRSLDSWSSSFQKLKQTPNPTVFEILKVSFDGLDD 438

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQ 299
           +EKKIFLDIACF      + +   +    F   I I VL+EK L+T+ + N ++MHDL+Q
Sbjct: 439 MEKKIFLDIACFRWLYHNESMIEQVYSSEFCSHIAIDVLVEKSLLTISSYNWIYMHDLIQ 498

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G +IV++++ EE G RSRLW  +++ HV T++TGTE +EGI L  Y  E   +   + 
Sbjct: 499 EMGCEIVRKEN-EEPGGRSRLWLRKDIFHVFTKNTGTEAIEGISLHLYELEEADW---NL 554

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           +AFSKM  L+LL I NL+L  G +++ N LR L W  YP K LP   Q D+  E+ + +S
Sbjct: 555 EAFSKMCKLKLLYIHNLRLSLGPKFIPNALRFLSWSWYPSKSLPPCFQPDELTELSLVHS 614

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
            I  LW GIK+   LK + LS+S NL R PDFTG PNLEKL+LEGCT L ++HPS+ L  
Sbjct: 615 NIDHLWNGIKYSRNLKSINLSYSINLTRTPDFTGIPNLEKLVLEGCTNLVKVHPSIALLK 674

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKF 533
           +L I N ++C S+ +LP ++ M+ LE  +      LK +P  +  +K LS L + G    
Sbjct: 675 RLKIWNFRNCKSIKSLPSEVNMEFLETFDVSGCSKLKMIPEFVGQMKRLSKLSLGGT-AI 733

Query: 534 REFPEIVEHM-EHLSELHLEGTAIRGLPLSIELLSGLV-----LLNLKNCRSLEILPVTV 587
            + P  +EH+ E L EL L G  IR  P S  L   L+     L   K    L  L  ++
Sbjct: 734 EKLPSSIEHLSESLVELDLSGLVIREQPYSRFLKQNLIASSFGLFPRKRPHPLVPLLASL 793

Query: 588 SNLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLS 646
            +   L +L L+ C+  + + P  + S+  L  L L G +   + +SI LL+KL+ +N+ 
Sbjct: 794 KHFSSLTTLNLNDCNLCEGEIPNDIGSLSSLESLELRGNNFVSLSASIHLLSKLKHINVE 853

Query: 647 DCKNLVRLP 655
           +C+ L +LP
Sbjct: 854 NCRRLQQLP 862



 Score =  189 bits (480), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 162/517 (31%), Positives = 247/517 (47%), Gaps = 82/517 (15%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
            L+S+ LS    L + P+    + +L +L L+G T++ +V  SI LL +L++ N  +CK++
Sbjct: 629  LKSINLSYSINLTRTPDFT-GIPNLEKLVLEGCTNLVKVHPSIALLKRLKIWNFRNCKSI 687

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTS----- 703
              LPS +  ++ L+T ++SGC KL+ +PE +GQ++ L +L + GTA+   P S       
Sbjct: 688  KSLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQMKRLSKLSLGGTAIEKLPSSIEHLSES 746

Query: 704  ---------------WYSYIPINLMRKSVALK-----------LPSLSGLCSLRKLNLTD 737
                           +  ++  NL+  S  L            L SL    SL  LNL D
Sbjct: 747  LVELDLSGLVIREQPYSRFLKQNLIASSFGLFPRKRPHPLVPLLASLKHFSSLTTLNLND 806

Query: 738  CNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPP 797
            CNL EG +P+DIG+L SL+ L L  N+FVSL  SI  LSKL +I +E+C+RLQ LP+LP 
Sbjct: 807  CNLCEGEIPNDIGSLSSLESLELRGNNFVSLSASIHLLSKLKHINVENCRRLQQLPELPA 866

Query: 798  -NIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLA---FSMLREYLEAV 853
             +  +V  + C SL    D   LC+  +    C++ L  +GN+  +   +S+L+  LE  
Sbjct: 867  SDYLRVVTDNCTSLQMFPDPQDLCRIGNFEFNCVNCLSTVGNQDASYFLYSVLKRLLEET 926

Query: 854  SNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRG 913
              + ++   V+PGSEIPEWF  Q+ G S+T   PS+       +G+A+C +     N   
Sbjct: 927  HRSSEYFRFVIPGSEIPEWFNNQSVGDSVTEKLPSDYM----WIGFAVCALIVPPDNPSA 982

Query: 914  N------NCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPL 967
                    C   +P      H G    G  F  K  Q  SDHL+LL L +   Y      
Sbjct: 983  VPEKISLRC--RWPKGSPWTHSGVPSRGACFVVK--QIVSDHLFLLVLRKPENY------ 1032

Query: 968  ESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEELDQTTNQP-SRFTVYNLNE 1026
                   E       F+  +   ++VK CG    Y  +++EL    N+  S  ++Y   +
Sbjct: 1033 ------LEDTCNEAKFDFSINNCIKVKKCGARAFYQHDMDELISKMNRSKSSISLYEAMD 1086

Query: 1027 FDQHFVGSKMIVATTSKRSLTEYFGAEASGSGCCDDE 1063
              +  V +    AT              S SGC DDE
Sbjct: 1087 EQEAAVKATQEAAT--------------SRSGCSDDE 1109


>gi|224145016|ref|XP_002325496.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862371|gb|EEE99877.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1254

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 356/985 (36%), Positives = 530/985 (53%), Gaps = 95/985 (9%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +DSR E++  L+    SDVR IGI GMG +GKTTIA   +  IS ++E   FL N+R+ S
Sbjct: 191  VDSRIEQINKLLSVVPSDVRRIGIWGMGAIGKTTIAEAFFYSISSQYEGCHFLPNIRQES 250

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
             KG L  L+ +LLS+LL+  +  +         +  RL +KKVLLV+DDV+DV+Q Q L 
Sbjct: 251  EKGRLNDLRDELLSKLLEEENLRVGTPHIPT-FIRDRLCQKKVLLVLDDVIDVRQFQHLI 309

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
                  G GS +++TSRD  +LK + VDE+Y+   LN  EALQLF++ AFK   P +  +
Sbjct: 310  -EMPLIGPGSVLVVTSRDRQVLK-NVVDEIYEVEELNSHEALQLFSLNAFKGNHPPKAYM 367

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            +LS   I YA G PLAL+VLGS+L  +    W S L  +E  P   I D+L+I FD L++
Sbjct: 368  ELSITAINYAKGNPLALQVLGSYLFDKGRQFWESQLNEIESFPELNIYDLLRIGFDALRD 427

Query: 241  LE-KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
               K IFLD+ACFF+G+  D+V   L+GCGF    G  VLI++CLI + ++ + MHDLLQ
Sbjct: 428  NNTKSIFLDVACFFRGHRVDFVKRILDGCGFKTDTGFSVLIDRCLIKISDDKVEMHDLLQ 487

Query: 300  ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
            E+  ++V+++S +ELG++SRLW  ++V  VLT + GT  VEGI LD      E+ L  S+
Sbjct: 488  EMAHEVVRKESVDELGRQSRLWSPKDVYQVLTNNLGTGKVEGIFLD-VSKTREIEL--SS 544

Query: 360  KAFSKMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
             A  +M  LRLLKI        C + LP+GLE LS  LR L W GYPL  LP N +    
Sbjct: 545  TALERMYKLRLLKIYNSEAGVKCRVHLPHGLESLSEELRYLHWDGYPLTSLPCNFRPQNL 604

Query: 412  IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
            +E+ +  S + +LW+G ++L  LK + LS+ E++  +PD + A NLE+L L+ CT L + 
Sbjct: 605  VELNLSSSNVKQLWRGDQNLVNLKDVNLSNCEHITLLPDLSKARNLERLNLQFCTSLVKF 664

Query: 472  HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDL 531
              S+   +KL+ L+++ C  LI LP +     LE LNL                  SG  
Sbjct: 665  PSSVQHLDKLVDLDLRGCKRLINLPSRFNSSFLETLNL------------------SGCS 706

Query: 532  KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
              ++ PE       L+ L+L  TA+  LP SI  L GLV LNLKNC+ L  LP  +  LK
Sbjct: 707  NIKKCPETA---RKLTYLNLNETAVEELPQSIGELGGLVALNLKNCKLLVNLPENMYLLK 763

Query: 592  CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
             L    +SGCS + +FP+  R+++    L+L+GT+I+E+PSSI  L +L  L+LS C ++
Sbjct: 764  SLLIADISGCSSISRFPDFSRNIR---YLYLNGTAIEELPSSIGDLRELIYLDLSGCSSI 820

Query: 652  VRLPSSIIALKSL-----------KTLNLSGCFKLENVP-ETLGQIESLEELDISGTAVP 699
               P     ++ L            ++ L+ C    N   ET   +   +      T +P
Sbjct: 821  TEFPKVSRNIRELYLDGTAIREIPSSIQLNVCVNFMNCTCETANNLRFFQAASTGITKLP 880

Query: 700  HSTSWYSYIP---------INLMRKSVALKLPSLS-GLCSLRKLNLTDCNLMEGALPSDI 749
                    +          +  +   V L LP     L  LRKLNL  C +    +P  +
Sbjct: 881  SPVGNLKGLACLEVGNCKYLKGIECLVDLHLPERDMDLKYLRKLNLDGCCI--SKVPDSL 938

Query: 750  GNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCAS 809
            G L SL+ L LS N+F ++P +I  L +L  + L  C++L+S+P+LP  + ++  + C S
Sbjct: 939  GCLSSLEVLDLSGNNFETMPMNIYKLVELQYLGLRSCRKLKSIPRLPRRLSKLDAHDCQS 998

Query: 810  LVTLLDALKLCKSDSTMIACLDSLKL-LGNKSLAFSMLR-----EYLEAVSNTRQHLSVV 863
            L+ +  +  + + +       + L+L + N+ L +S+L+     E L  V       S  
Sbjct: 999  LIKVSSSY-VVEGNIFEFIFTNCLRLPVINQILLYSLLKFQLYTERLHQVPAGTS--SFC 1055

Query: 864  VPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKL---VGYAIC-----------CVFHVLK 909
            +PG   PEWF +Q+ GS++T    S+  N + L   +G  I            C +H  +
Sbjct: 1056 LPGDVTPEWFSHQSWGSTVTFHLSSHWANSEFLGFSLGAVIAFRSFGHSLQVKCTYH-FR 1114

Query: 910  NSRGNNCFGSYPTHQLNCHIGHGIY 934
            N  G+       +H L C++ HG Y
Sbjct: 1115 NKHGD-------SHDLYCYL-HGWY 1131


>gi|105922810|gb|ABF81438.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1524

 Score =  491 bits (1263), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 300/627 (47%), Positives = 406/627 (64%), Gaps = 25/627 (3%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           +DSR E L   +     +   IGICGMGG+GKTT++RV+YD I  +FE S FL NVRE+ 
Sbjct: 289 IDSRVEVLNGYIGEEVGEAIFIGICGMGGIGKTTVSRVLYDRIRWQFEGSCFLANVREVF 348

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           + K G   LQ QLLS++L +   S+W+   GI+M+  RL+ KK+LL++DDV D KQL+ L
Sbjct: 349 AEKDGPRRLQEQLLSEIL-MERASVWDSSRGIEMIKRRLRLKKILLILDDVDDKKQLEFL 407

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           A    WFG  SRIIITSRD+++   +   ++Y+   LN D+AL LF+ KAFK  QP ++ 
Sbjct: 408 AAEPGWFGPRSRIIITSRDKNVFTGNDDTKIYEAEKLNDDDALMLFSQKAFKNDQPAEDF 467

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V+LS +++ YA GLPLALEV+GSFL GRS+ EWR  + R+   P  +I+D+L+ISFDGL 
Sbjct: 468 VELSKQVVGYANGLPLALEVIGSFLYGRSIPEWRGAINRMHEIPDCKIMDVLRISFDGLH 527

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           E ++KIFLDIACF KG  +D +T  L+ CGF+  IGI VLIE+ LI+V+ + +WMH+LLQ
Sbjct: 528 ESDQKIFLDIACFLKGFKKDRITRILDSCGFNAGIGIPVLIERSLISVYGDQVWMHNLLQ 587

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
            +G++IV+ + P+E GKRSRLW  E+V   L ++TG E +E I LD    +   +   + 
Sbjct: 588 IMGKEIVRCEDPKEPGKRSRLWTYEDVSLALMDNTGKEKIEAIFLDMPGIKEAQW---NM 644

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           KAFSKM+ LRLLKI N+QL  G E LS  LR L W  YP K LP+ LQ+D  +E++M  S
Sbjct: 645 KAFSKMSRLRLLKIDNVQLSEGPEDLSKELRFLEWHSYPSKSLPAGLQVDGLVELHMANS 704

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
            I +LW G K    LKV+ LS+S NL + PD TG PNL  LILEGCT L E+HPSL  H 
Sbjct: 705 SIEQLWYGCKSAVNLKVINLSNSLNLSKTPDLTGIPNLSSLILEGCTSLSEVHPSLGRHK 764

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
            L  +N+ +C S   LP  + M+SL+                + TLD  G  K  +FP+I
Sbjct: 765 NLQYVNLVNCKSFRILPSNLEMESLK----------------VFTLD--GCTKLEKFPDI 806

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
           V +M  L EL L+GT I  L  SI  L GL +L++ NC++LE +P ++  LK L+ L LS
Sbjct: 807 VGNMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLKSLKKLDLS 866

Query: 600 GCSKLKKFPEIVRSMKDLSELFLDGTS 626
           GCS+LK  PE +  ++ L E   DG S
Sbjct: 867 GCSELKNIPENLGKVESLEE--FDGLS 891



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/172 (45%), Positives = 114/172 (66%), Gaps = 3/172 (1%)

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSL 580
           L  +++S  L   + P++   + +LS L LEG T++  +  S+     L  +NL NC+S 
Sbjct: 719 LKVINLSNSLNLSKTPDLT-GIPNLSSLILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSF 777

Query: 581 EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
            ILP  +  ++ L+   L GC+KL+KFP+IV +M  L EL LDGT I E+ SSI  L  L
Sbjct: 778 RILPSNLE-MESLKVFTLDGCTKLEKFPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGL 836

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD 692
           E+L++++CKNL  +PSSI  LKSLK L+LSGC +L+N+PE LG++ESLEE D
Sbjct: 837 EVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKNIPENLGKVESLEEFD 888



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 115/208 (55%), Gaps = 11/208 (5%)

Query: 557 RGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKD 616
           + LP  +++  GLV L++ N  S+E L     +   L+ + LS    L K P++   + +
Sbjct: 685 KSLPAGLQV-DGLVELHMANS-SIEQLWYGCKSAVNLKVINLSNSLNLSKTPDLT-GIPN 741

Query: 617 LSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
           LS L L+G TS+ EV  S+     L+ +NL +CK+   LPS++  ++SLK   L GC KL
Sbjct: 742 LSSLILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSFRILPSNL-EMESLKVFTLDGCTKL 800

Query: 676 ENVPETLGQIESLEELDISGTAVPH-STSWYSYIPINLMRKSVALKLPSLSG----LCSL 730
           E  P+ +G +  L EL + GT +   S+S +  I + ++  +    L S+      L SL
Sbjct: 801 EKFPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLKSL 860

Query: 731 RKLNLTDCNLMEGALPSDIGNLCSLKEL 758
           +KL+L+ C+ ++  +P ++G + SL+E 
Sbjct: 861 KKLDLSGCSELKN-IPENLGKVESLEEF 887



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 119/263 (45%), Gaps = 48/263 (18%)

Query: 617 LSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
           L EL +  +SI+++    +    L+++NLS+  NL + P  +  + +L +L L GC  L 
Sbjct: 696 LVELHMANSSIEQLWYGCKSAVNLKVINLSNSLNLSKTPD-LTGIPNLSSLILEGCTSLS 754

Query: 677 NVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLT 736
            V  +LG+ ++L+ +++           +  +P NL  +S  LK+ +L G   L K    
Sbjct: 755 EVHPSLGRHKNLQYVNLVNCKS------FRILPSNLEMES--LKVFTLDGCTKLEKF--- 803

Query: 737 DCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ-- 794
                    P  +GN+  L EL L       L +SI HL  L  + + +CK L+S+P   
Sbjct: 804 ---------PDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSI 854

Query: 795 -LPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAV 853
               +++++ ++GC+ L  + + L   +S                         E  + +
Sbjct: 855 GCLKSLKKLDLSGCSELKNIPENLGKVES------------------------LEEFDGL 890

Query: 854 SNTRQHLSVVVPGSEIPEWFMYQ 876
           SN R    +  PG+EIP WF ++
Sbjct: 891 SNPRPGFGIAFPGNEIPGWFNHR 913


>gi|359486100|ref|XP_002274578.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1535

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 363/1103 (32%), Positives = 537/1103 (48%), Gaps = 195/1103 (17%)

Query: 93   MLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYK 152
            M+   L  K+V +V+DDV D  QL+ L G+REW G GSR+I+T+R++H+L    VD++Y+
Sbjct: 408  MIKDILLSKRVFMVLDDVDDPSQLEYLLGHREWLGEGSRVIVTTRNKHVLAVQEVDDLYE 467

Query: 153  PHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEW 212
              GLN++EA +LF++ AFK   P  +   LS R++ Y  GLPLAL+VLGS L  +++ +W
Sbjct: 468  VKGLNFEEACELFSLYAFKQNLPKSDYRNLSHRVVGYCQGLPLALKVLGSLLFKKTIPQW 527

Query: 213  RSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHP 272
             S L +L+ EP + I  +L+ S+DGL   E+ IFLD+ACFFKG DRD+V+  L+ C F  
Sbjct: 528  ESELRKLDREPEAGIHKVLRRSYDGLDRTEQNIFLDVACFFKGEDRDFVSRILDACDFPA 587

Query: 273  VIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTE 332
             IGI+ L +KCLIT+  N + MHDL+Q +G +IV+ + P+E  + SRLW   ++   L  
Sbjct: 588  EIGIKNLNDKCLITLPYNRIAMHDLIQHMGCEIVREKFPDEPNQWSRLWDPHDIQQALRT 647

Query: 333  STGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLL 392
            S      + I LD    +    +C  +  F+KMT+LRLLK+      +G+ Y        
Sbjct: 648  SKEIPKAQTISLDLSKLKR---VCFDSNVFAKMTSLRLLKV-----HSGVYY-------- 691

Query: 393  GWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFT 452
                +   FLPSN   +K +E+++  S I +LW+G K L++LKV+ LS S NLI+M +F+
Sbjct: 692  ---HHFEDFLPSNFDGEKLVELHLKCSNIKQLWQGHKDLERLKVIDLSCSRNLIQMSEFS 748

Query: 453  GAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI------------- 499
              PNLE+LILEGC  L +IHPS+    KL  L+++ C  L  LP  I             
Sbjct: 749  SMPNLERLILEGCVSLIDIHPSVGNMKKLTTLSLRFCDQLKNLPDSIGYLESLESLDLSD 808

Query: 500  ------------LMKSLEKLNL-----KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEH 542
                         MKSL KL+L     K LP +I  L+ L +L++S   KF +FPE   +
Sbjct: 809  CSKFVKFPEKGGNMKSLMKLDLRFTAIKDLPDSIGDLESLESLNLSFCSKFEKFPEKGGN 868

Query: 543  MEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEI-------------------- 582
            M+ L  L L  TAI+ LP SI  L  L+ LNL  C   E                     
Sbjct: 869  MKSLRHLCLRNTAIKDLPDSIGDLESLMFLNLSGCSKFEKFPEKGGNMKSLMELDLRYTA 928

Query: 583  ---LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTK 639
               LP ++ +L+ LR L LSGCSK +KFPE   +MK L EL L  T+IK++P SI  L  
Sbjct: 929  IKDLPDSIGDLESLRLLDLSGCSKFEKFPEKGGNMKSLVELDLKNTAIKDLPDSIGDLES 988

Query: 640  LELLNLSDCKNLVRLPSSIIALKSLKTLNLSG-----------------------CFKLE 676
            LE L+LSDC    + P     +KSLK L L+                        C K E
Sbjct: 989  LESLDLSDCSKFEKFPEKGGNMKSLKWLYLTNTAIKDLPDSIGDLESLLSLHLSDCSKFE 1048

Query: 677  NVPETLGQIESLEELDISGTAV---PHST--------------SWYSYIPIN-------- 711
              PE  G ++SL +LD+  TA+   P S               S +   P          
Sbjct: 1049 KFPEKGGNMKSLMKLDLRYTAIKDLPDSIGDLESLRLLDLSDCSKFEKFPEKGGNMKSLK 1108

Query: 712  --LMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSL 768
               +R +    LP S+  L SL  L+L+DC+  E   P   GN+ SL +L L+  +   L
Sbjct: 1109 KLFLRNTAIKDLPDSIGDLESLESLDLSDCSKFE-KFPEKGGNMKSLMDLDLTNTAIKDL 1167

Query: 769  PTSITHLSKLLNIELEDCKRLQSLPQ--------------------LPPNIRQVR----- 803
            P SI  L  L  + L DC + +  P+                    LP NI +++     
Sbjct: 1168 PDSIGDLESLKFLVLSDCSKFEKFPEKGGNMKSLIHLDLKNTAIKDLPTNISRLKNLERL 1227

Query: 804  -VNGCASLVTLLDALKLCKSDSTMIA-C---------------LDSLKLLGNKSLAFSML 846
             + GC+ L   L + +LC      I+ C               +D+      + L+  + 
Sbjct: 1228 MLGGCSDLWEGLISNQLCNLQKLNISQCKMAGQILVLPSSLQEIDAYPCTSKEDLSGLLW 1287

Query: 847  REYLEAVSNTRQHL-----SVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYA 900
              +L  + +T + L       V+P S  IPEW  YQN GS +T   P+N Y     +G+ 
Sbjct: 1288 LCHLNWLKSTTEELKCWKLGAVIPESNGIPEWIRYQNMGSEVTTELPTNWYEDPDFLGFV 1347

Query: 901  ICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTC 960
            + CV+  +  S  +      P   L C +     G  F+D+     S     L +     
Sbjct: 1348 VSCVYRHIPTSDFDE-----PYLFLECELNLHGNGFEFKDECCHGYSCDFKDLMVWVWCY 1402

Query: 961  YDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEE----LDQTTN-- 1014
              I +P E +    +  H+N SFE +L   + +K CG++ ++  + +     L+   N  
Sbjct: 1403 PKIAIPKEHH---HKYTHINASFESYL---INIKKCGINLIFAGDQQNHMPMLEHPQNSG 1456

Query: 1015 ------QPSRFTVYNLNEFDQHF 1031
                  Q +   V+  N+ D+H+
Sbjct: 1457 DNGSALQDTDGNVHGANQDDEHY 1479


>gi|105922395|gb|ABF81414.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1282

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 283/596 (47%), Positives = 386/596 (64%), Gaps = 25/596 (4%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVREI-SSKGGLVSLQRQLLSQLLKLADNSIWNVFDG 90
           KTT+ARVVYD I  +FE S FL NVRE+ + K G   LQ QLLS++L +   S+W+   G
Sbjct: 302 KTTVARVVYDRIRWQFEGSCFLANVREVFAEKDGRRRLQEQLLSEIL-MERASVWDSSRG 360

Query: 91  IDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEV 150
           I+M+  RL+ KK+LL++DDV D +QL+ LA    WFG GSRIIITSRD+ ++  +  + +
Sbjct: 361 IEMIKRRLRLKKILLILDDVDDKEQLEFLAEEPGWFGPGSRIIITSRDKKVVTGNNNNRI 420

Query: 151 YKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVD 210
           Y+   LN D+AL LF+ KAFK   P ++ V+LS +++ YA GLPLALEV+GSFL  RS+ 
Sbjct: 421 YEAKKLNDDDALMLFSQKAFKNDHPTEDFVELSKQVVGYANGLPLALEVIGSFLYDRSIP 480

Query: 211 EWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGF 270
           EWR  + R+   P   I+D+L++SFDGL E +KKIFLDIACF KG   D +T  L+  GF
Sbjct: 481 EWRGAINRMNEIPDGRIIDVLRVSFDGLHESDKKIFLDIACFLKGFKIDRITRILQSRGF 540

Query: 271 HPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVL 330
           H  IGI VLIE+ LI+V  + +WMH+LLQ +G++IV+ +SPEE G+RSRLW  E+VC  L
Sbjct: 541 HAGIGIPVLIERSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYEDVCLAL 600

Query: 331 TESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLR 390
            ++TG E +E I  D    +   +   + KAFSKM+ LRLLKI N+QL  G E LSN+L 
Sbjct: 601 MDNTGKEKIEAIFFDMPGIKEAQW---NMKAFSKMSRLRLLKIDNVQLSEGPENLSNKLL 657

Query: 391 LLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD 450
            L W  YP K LP+ LQ+D+ +E++M  S + +LW G K    LKV+ LS+S +L + PD
Sbjct: 658 FLEWHSYPSKSLPAGLQVDELVELHMANSNLDQLWYGCKSAFNLKVINLSNSLHLTKTPD 717

Query: 451 FTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK 510
           FTG PNLE LILEGCT L E+HPSL  H KL  +N+ DC S+  LP  + M+SL+     
Sbjct: 718 FTGIPNLESLILEGCTSLSEVHPSLGYHKKLQYVNLMDCESVRILPSNLEMESLK----- 772

Query: 511 SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLV 570
                      +  LD  G  K  +FP+IV +M  L  L L+GT I  L  SI  L GL 
Sbjct: 773 -----------VCILD--GCSKLEKFPDIVGNMNCLMVLRLDGTGIEELSSSIHHLIGLE 819

Query: 571 LLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS 626
           +L++K C++L+ +P ++  LK L+ L L GCS+ +  PE +  ++ L E   DG S
Sbjct: 820 VLSMKTCKNLKSIPSSIGCLKSLKKLDLFGCSEFENIPENLGKVESLEE--FDGLS 873



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/267 (36%), Positives = 144/267 (53%), Gaps = 27/267 (10%)

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKL-----NLKSLPTTISGLKCLSTLDVSGDL 531
           L NKL+ L      S  +LP  + +  L +L     NL  L         L  +++S  L
Sbjct: 652 LSNKLLFLEWHSYPSK-SLPAGLQVDELVELHMANSNLDQLWYGCKSAFNLKVINLSNSL 710

Query: 532 KFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
              + P+    + +L  L LEG T++  +  S+     L  +NL +C S+ ILP  +  +
Sbjct: 711 HLTKTPDFT-GIPNLESLILEGCTSLSEVHPSLGYHKKLQYVNLMDCESVRILPSNLE-M 768

Query: 591 KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKN 650
           + L+   L GCSKL+KFP+IV +M  L  L LDGT I+E+ SSI  L  LE+L++  CKN
Sbjct: 769 ESLKVCILDGCSKLEKFPDIVGNMNCLMVLRLDGTGIEELSSSIHHLIGLEVLSMKTCKN 828

Query: 651 LVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD------------ISGTAV 698
           L  +PSSI  LKSLK L+L GC + EN+PE LG++ESLEE D            I G  +
Sbjct: 829 LKSIPSSIGCLKSLKKLDLFGCSEFENIPENLGKVESLEEFDGLSNPRPGFGIAIPGNEI 888

Query: 699 PHSTSWYSYIPINLMRKSVALKLPSLS 725
           P    W+++     M  S+++++PS S
Sbjct: 889 P---GWFNH---QSMGSSISVQVPSWS 909



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 187/450 (41%), Gaps = 108/450 (24%)

Query: 614  MKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCF 673
            + +L EL +  +++ ++    +    L+++NLS+  +L + P     + +L++L L GC 
Sbjct: 675  VDELVELHMANSNLDQLWYGCKSAFNLKVINLSNSLHLTKTPD-FTGIPNLESLILEGCT 733

Query: 674  KLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKL 733
             L  V  +LG  + L+                    +NLM       LPS   + SL+  
Sbjct: 734  SLSEVHPSLGYHKKLQY-------------------VNLMDCESVRILPSNLEMESLKVC 774

Query: 734  NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
             L  C+ +E   P  +GN+  L  L L       L +SI HL  L  + ++ CK L+S+P
Sbjct: 775  ILDGCSKLE-KFPDIVGNMNCLMVLRLDGTGIEELSSSIHHLIGLEVLSMKTCKNLKSIP 833

Query: 794  QLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAV 853
                        GC   +  LD          +  C +   +  N     S+  E  + +
Sbjct: 834  S---------SIGCLKSLKKLD----------LFGCSEFENIPENLGKVESL--EEFDGL 872

Query: 854  SNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF-------- 905
            SN R    + +PG+EIP WF +Q+ GSSI+V  PS        +G+  C  F        
Sbjct: 873  SNPRPGFGIAIPGNEIPGWFNHQSMGSSISVQVPS------WSMGFVACVAFSANGESPS 926

Query: 906  ---HVLKNSRGNNCFGSYPTHQ-LNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCY 961
               H   N R N     YP+   ++C+             + Q  SDH+WL YLS     
Sbjct: 927  LFCHFKANGREN-----YPSPMCISCN-------------YIQVLSDHIWLFYLSFDHLK 968

Query: 962  DIRLPLESNLEPFESNHVNV-SFEPWLGQGLEVKMCG---LHPVYMDEVEELDQTTNQPS 1017
            +++   E   E + +  ++  SF+P    G++VK CG   L  VY+         T QPS
Sbjct: 969  ELK---EWKHESYSNIELSFHSFQP----GVKVKNCGVCLLSSVYI---------TPQPS 1012

Query: 1018 RFTVYNLNEFDQHFVGSKMIVATTSKRSLT 1047
                        HF+ +    A++ + SLT
Sbjct: 1013 ----------SAHFIVTSKEAASSFRASLT 1032


>gi|359493406|ref|XP_002279885.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1351

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 390/1145 (34%), Positives = 567/1145 (49%), Gaps = 174/1145 (15%)

Query: 17   SDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQL 76
            +DVR++GI G GG+GKTTIA++VY+ I  +F  + FL +V+E S  G  + LQ+QLL  +
Sbjct: 211  NDVRVVGIYGTGGIGKTTIAKIVYNEIQCQFSGASFLQDVKERSKNGCQLELQKQLLRGI 270

Query: 77   LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITS 136
            L   D +  ++ +GI+++  RL  KK+L+VIDDV  +KQL+SLA + +WFG GSRIIIT+
Sbjct: 271  LG-KDIAFSDINEGINIIQGRLGSKKILIVIDDVDHLKQLESLAKSPKWFGPGSRIIITT 329

Query: 137  RDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLA 196
            RD+HLL  +GV+  Y+   L+Y EALQLF+  AFK   P ++ V  S  ++ YA GLPLA
Sbjct: 330  RDQHLLGEYGVNIPYRVTELHYKEALQLFSRYAFKQNVPKEDYVDFSNCMVDYAQGLPLA 389

Query: 197  LEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGN 256
            L+VLGS L G ++DEWRS L+RL+  P  EI D+L+ISFDGL  LEK +FLDIA FFK  
Sbjct: 390  LKVLGSSLHGMTIDEWRSALDRLKKNPVKEINDVLRISFDGLDNLEKDVFLDIAWFFKKE 449

Query: 257  DRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGK 316
             +D+V+  L+GC      GI +L +KCLIT+ +N + MHDL++++G  IV+ + P +  K
Sbjct: 450  CKDFVSRILDGCNLFATHGITILHDKCLITISDNIIQMHDLIRQMGWAIVRDEYPGDPSK 509

Query: 317  RSRLWKEEEVCHVLTE------------STGTELV-----------EGIVLDNYHHENEV 353
             SRLW  +++    +             S   +LV           E + L+      E+
Sbjct: 510  WSRLWDVDDIYDAFSRQEFLGKLKVIDLSDSKQLVKMPKFSSMPNLERLNLEGCISLREL 569

Query: 354  YLCASAKAFSKMTNLRLLKICNLQ-LPNGLEYLSNRLRLLGWRGYPLKFLPS-NLQMDKT 411
            +L  S     ++T L L     LQ  P G+++ S  +  L  R   LK  P  +  M   
Sbjct: 570  HL--SIGDLKRLTYLNLGGCEQLQSFPPGMKFESLEVLYLD-RCQNLKKFPKIHGNMGHL 626

Query: 412  IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPN-LEKLILEGCTR--- 467
             E+Y+  S I EL   I +L  L+V+ LS+  NL + P+  G    L +L LEGC++   
Sbjct: 627  KELYLNKSEIKELPSSIVYLASLEVLNLSNCSNLEKFPEIHGNMKFLRELHLEGCSKFEK 686

Query: 468  --------------------LYEIHPSLLLHNKLIILNMKDCTSLITLPG-KILMKSLEK 506
                                + E+  S+     L IL++  C+     P  K  MK L++
Sbjct: 687  FSDTFTYMEHLRGLHLGESGIKELPSSIGYLESLEILDLSYCSKFEKFPEIKGNMKCLKE 746

Query: 507  LNL-----KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPL 561
            L L     K LP ++  L  L  L +   LKF +F +I  +M  L EL+L  + I+ LP 
Sbjct: 747  LYLDNTAIKELPNSMGSLTSLEILSLKECLKFEKFSDIFTNMGLLRELYLRESGIKELPN 806

Query: 562  SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR-----------------------SLKL 598
            SI  L  L +LNL  C + +  P    NLKCL+                       SL L
Sbjct: 807  SIGYLESLEILNLSYCSNFQKFPEIQGNLKCLKELCLENTAIKELPNGIGCLQALESLAL 866

Query: 599  SGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSI 658
            SGCS  ++FPEI   M  L  LFLD T IKE+P SI  LT+L+ L+L +C+NL  LP+SI
Sbjct: 867  SGCSNFERFPEI--QMGKLWALFLDETPIKELPCSIGHLTRLKWLDLENCRNLRSLPNSI 924

Query: 659  IALKSLKTLNLSGCFKLE-----------------------NVPETLGQIESLEELDISG 695
              LKSL+ L+L+GC  LE                        +P  +G +  LE L++  
Sbjct: 925  CGLKSLERLSLNGCSNLEAFSEITEDMERLEHLFLRETGITELPSLIGHLRGLESLELIN 984

Query: 696  ----TAVPHSTSWYSYIPINLMRKSVALK-LP-SLSGL-CSLRKLNLTDCNLMEGALPSD 748
                 A+P+S    + +    +R    L+ LP +L  L C L  L+L  CNLMEG +PSD
Sbjct: 985  CENLVALPNSIGSLTCLTTLRVRNCTKLRNLPDNLRSLQCCLLWLDLGGCNLMEGEIPSD 1044

Query: 749  IGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCA 808
            +  L  L  L +S+N    +P  IT LSKL  + +  C  L+ + ++P ++  +  +GC 
Sbjct: 1045 LWCLSLLVSLDVSENHIRCIPAGITQLSKLKALFMNHCPMLEEIGEVPSSLTVMEAHGCP 1104

Query: 809  SLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEA-----VSNTRQHLSVV 863
            SL T            T  +    L     K     +  E+ E      +    Q  S++
Sbjct: 1105 SLET-----------ETFSS---LLWSSLLKRFKSPIQPEFFEPNFFLDLDFYPQRFSIL 1150

Query: 864  VPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPT 922
            +PGS  IPEW  +Q  G  +++  P N Y     +G+ +      L +       GS P 
Sbjct: 1151 LPGSNGIPEWVSHQRMGCEVSIELPMNWYEDDNFLGFVLFFHHVPLDDDECETTEGSIPH 1210

Query: 923  HQLNCHIGHG-----IYGIGFRDKFGQAGSDHLWLLYLSRQTCYDI-------------- 963
             +L   I HG     +  I F  K     + HL    LS + CYD               
Sbjct: 1211 CELT--ISHGDQSERLEEISFYFKCKTYLASHL----LSGKHCYDSDSTPDPAIWVTYFP 1264

Query: 964  RLPLESNLEPFESNHVNVSFEPWLGQG---------LEVKMCGLHPVYMDEVEELDQTT- 1013
            ++ + S       N+    F   +G G          +VK CG+H +Y       DQ   
Sbjct: 1265 QIDIPSEYRSRRRNNFKDHFHTPIGVGSFKCGDNACFKVKSCGIHLLYAQ-----DQIHW 1319

Query: 1014 NQPSR 1018
             QPSR
Sbjct: 1320 PQPSR 1324


>gi|147841230|emb|CAN68969.1| hypothetical protein VITISV_043153 [Vitis vinifera]
          Length = 1074

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 342/976 (35%), Positives = 501/976 (51%), Gaps = 141/976 (14%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD   E+L+ L+     DVRM+GI G+GG+GKTTIA++VY+ I  +F  + FL+ V+  S
Sbjct: 4   MDVHLEELKSLLKMQLDDVRMVGIYGIGGIGKTTIAKMVYNDILCQFNGASFLEGVKNRS 63

Query: 61  S-KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
                 + L ++LL  +++     + +++DG++M+  RL  KKVL+V  DV D  ++Q L
Sbjct: 64  QCNNDRLQLLQELLHGIMEGGHLKLESIYDGMNMIKGRLGSKKVLVVFYDVDDSDKVQRL 123

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
             + EWFG GSRIIIT+RD+ LL  +GV   Y+   L   EA++LF+  AFK     ++ 
Sbjct: 124 VRSYEWFGPGSRIIITTRDKQLLDEYGVHASYEAKVLEDKEAIELFSWHAFKVQNIREDY 183

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V +S R++ YA GLPLALEVLGS L  ++ DEW+S +E+L+  P  +I D+L+IS DGL 
Sbjct: 184 VDMSNRLVDYAKGLPLALEVLGSSLYNKTKDEWKSAIEKLKKNPNRKINDMLKISLDGLD 243

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           + + ++FLDIACF KG  +D +   L+    H    IRVL ++CLIT+    + MHDL+Q
Sbjct: 244 DSQVEVFLDIACFLKGEAKDCILRILDD---HAEYDIRVLRDRCLITISATRVQMHDLIQ 300

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           ++G  I++ + P    KR+RLW  +++   L+   G E VE I  D    ++   +  + 
Sbjct: 301 QMGWSIIREKHP---SKRTRLWDIDDIHKALSAQEGMEQVEAISYDLSRSKD---IQVNK 354

Query: 360 KAFSKMTNLRLLKI------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
           K +  M  LR LK+              + LP   E+ S  LR L W  YPL+ LPSN  
Sbjct: 355 KVYENMKKLRFLKLYWGDYHGSMTKTYKVFLPKDXEFPSQELRYLYWEAYPLQTLPSNFN 414

Query: 408 MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGA------------- 454
            +  +E++M  S I +LWKG K L KLK++ LS S  L +MP++                
Sbjct: 415 GENLVELHMRNSTIKQLWKGRKVLGKLKIIDLSDSRLLTKMPNYQACRILRSSTSPFVKG 474

Query: 455 --------------PNLEKLILEGCTRLYEIHPSL--LLHNKLII--------------- 483
                         P LE L L GC    +   +   L H + I                
Sbjct: 475 QSGIKEIPSSIEYLPALEFLTLWGCRNFDKFQDNFGNLRHRRFIQAKKADIQELPNSFGY 534

Query: 484 ------LNMKDCTSLITLPGKILMKSLEKLNL-----KSLPTTISGLKCLSTLDVSGDLK 532
                 L + DC++L   P   +MK LE L L     K LP     L+ L  L +SG   
Sbjct: 535 LESPQNLCLDDCSNLENFPEIHVMKRLEILWLNNTAIKELPNAFGCLEALQFLYLSGCSN 594

Query: 533 FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKC 592
           F EFPEI ++M  L  L L  TAI+ LP SI  L+ L  LNL+NC++L  LP ++  LK 
Sbjct: 595 FEEFPEI-QNMGSLRFLRLNETAIKELPCSIGHLTKLRDLNLENCKNLRSLPNSICGLKS 653

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV 652
           L  L ++GCS L  FPEI+  MK L EL L  T I E+P SIE L  L  L L++C+NLV
Sbjct: 654 LEVLNINGCSNLVAFPEIMEDMKHLGELLLSKTPITELPPSIEHLKGLRRLVLNNCENLV 713

Query: 653 RLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINL 712
            LP+SI  L  L++L +  C KL N+P+ L  ++                          
Sbjct: 714 TLPNSIGNLTHLRSLCVRNCSKLHNLPDNLRSLQ-------------------------- 747

Query: 713 MRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSI 772
                          C LR+L+L  CNLM+GA+PSD+  L SL+ L +S++    +PT+I
Sbjct: 748 ---------------CCLRRLDLAGCNLMKGAIPSDLWCLSSLRFLDVSESPIPCIPTNI 792

Query: 773 THLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDS 832
             LS L  + +  C+ L+ +P+LP  +  +   GC  + T      L    S + + L +
Sbjct: 793 IQLSNLRTLRMNHCQMLEEIPELPSRLEVLEAPGCPHVGT------LSTPSSPLWSSLLN 846

Query: 833 LKLLGNKSLAFSMLREYLEAVSNTRQHL------SVVVPGS-EIPEWFMYQNEGSSITVT 885
           L         F    +Y E   ++   +       VV+PGS  IPEW  +Q+ G    + 
Sbjct: 847 L---------FKSRTQYCECEIDSNYMIWYFHVPKVVIPGSGGIPEWISHQSMGRQAIIE 897

Query: 886 RPSNLYNKKKLVGYAI 901
            P N Y     +G+A+
Sbjct: 898 LPKNRYEDNNFLGFAV 913


>gi|147769268|emb|CAN68108.1| hypothetical protein VITISV_013549 [Vitis vinifera]
          Length = 1236

 Score =  484 bits (1247), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 389/1115 (34%), Positives = 545/1115 (48%), Gaps = 215/1115 (19%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MDSR E L   +  GS DVR +GI GM G+GKTTIA  +YD I  +F+   FL N     
Sbjct: 198  MDSRMEDLLSRLCIGSDDVRFVGIWGMAGIGKTTIAEAIYDRIYTKFDGCCFLKN----- 252

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
                                           D+  +RL+ K+VL+V+DDVV  +QL++LA
Sbjct: 253  -------------------------------DIYKARLRPKRVLIVLDDVVHRQQLEALA 281

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            GN +WFGSGSRIIIT+R++ LL    VDE+YK   L YDEAL+LF   AF+   P ++ +
Sbjct: 282  GNHDWFGSGSRIIITTREKRLLIEQEVDEIYKVEKLEYDEALKLFCQYAFRYKHPTEDFM 341

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            QL    + Y GGLPLAL+VLGS L  +S+ EW+S L++L   P  E+L++L+ SFDGL +
Sbjct: 342  QLCHHAVDYTGGLPLALKVLGSCLYRKSIHEWKSELDKLNQFPNKEVLNVLKTSFDGLDD 401

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             EK +FLDIA F+KG D+D+V   L+   F PV  I  L++K LIT+ +N L+MHDLLQE
Sbjct: 402  NEKNMFLDIAFFYKGEDKDFVIEVLD--NFFPVSEIGNLVDKSLITISDNKLYMHDLLQE 459

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G +IV+++S ++ GKRSRL   E++  VLT + GTE VEG+V D      E+ L  S  
Sbjct: 460  MGWEIVRQESIKDPGKRSRLRVHEDIHDVLTTNKGTEAVEGMVFD-LSASKELNL--SVD 516

Query: 361  AFSKMTNLRLLKICNLQLPNGLEYL----------------------------------- 385
            AF+KM  LRLL+  N Q     EYL                                   
Sbjct: 517  AFAKMNKLRLLRFYNCQFYGSSEYLSEEELIASTRDAWRWMGYDNSPYNDSKLHLSRDFK 576

Query: 386  --SNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSE 443
              SN LR L W GYPLK LPS     K +E+ MCYS + +LW+G K  +KLK + LSHS+
Sbjct: 577  FPSNNLRSLHWHGYPLKSLPSIFHPKKLVELNMCYSLLKQLWEGKKAFEKLKFIKLSHSQ 636

Query: 444  NLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKS 503
            +L + PDF+ AP L ++IL GCT L ++HPS+    +LI LN++ C+ L   P +++  +
Sbjct: 637  HLTKTPDFSAAPKLRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKFP-EVVQGN 695

Query: 504  LEKLN--------------------------------LKSLPTTISGLKCLSTLDVSGDL 531
            LE L+                                L SLP +I  L  L TL +SG  
Sbjct: 696  LEDLSGISLEGTAIRELPSSIGGLNRLVLLNLRNCKKLASLPQSICELISLQTLTLSGCS 755

Query: 532  KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE---------- 581
            K ++ P+ +  ++ L ELH++GT I+ +P SI LL+ L  L+L  C+  E          
Sbjct: 756  KLKKLPDDLGRLQCLVELHVDGTGIKEVPSSINLLTNLQELSLAGCKGWESKSWNLAFSF 815

Query: 582  -----ILPVTVSNLKCLRSLK---LSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPS 632
                 + P+ +  L  L SLK   LS C+ L+   P  + S+  L  L L   S   +P+
Sbjct: 816  GSWPTLEPLRLPRLSGLYSLKILNLSDCNLLEGALPIDLSSLSSLEMLDLSRNSFITIPA 875

Query: 633  SIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD 692
            ++  L++L +L L  CK+L  LP       S++ LN   C  LE                
Sbjct: 876  NLSGLSRLHVLMLPYCKSLQSLPE---LPSSIRYLNAEACTSLETF-------------- 918

Query: 693  ISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDC-NLMEGALPSDIGN 751
               +  P + +   Y                  GL    +L  ++C  LME    ++   
Sbjct: 919  ---SCSPSACTSKRY-----------------GGL----RLEFSNCFRLME----NEHSR 950

Query: 752  LCSLKELYL-SKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
            L  L   Y  S  S   LP+SI +L+       E C  L++    P      R  G    
Sbjct: 951  LHVLMLPYCKSLQSLPELPSSIRYLNA------EACTSLETFSCSPSACTSKRYGGLR-- 1002

Query: 811  VTLLDALKLCKSDSTMIACLDSLK--LLGNKSLAF--SMLREYLEAVSNTRQHL-SVVVP 865
            +   +  +L +++       DS+K  LLG + LA     L+ +L    +   +L   +VP
Sbjct: 1003 LEFSNCFRLMENEHN-----DSVKHILLGIQLLASIPKFLQPFLGGFIDGPHNLYDAIVP 1057

Query: 866  GSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQL 925
            GS IPEWF+ Q+ GSS+TV  P + YN  KL+G A+C V                P    
Sbjct: 1058 GSRIPEWFVDQSTGSSVTVELPPHWYN-TKLMGMAVCAVIGA-TGVIDPTIEEWRPQIYF 1115

Query: 926  NCH--IGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNH--VNV 981
             C   I  G   I  R        DH W  YLS   C+     L     PF  +   + V
Sbjct: 1116 KCSSVIYQGDDAIMSR----SMKDDHTWFRYLS--LCW-----LHGRTPPFGKSRGSMVV 1164

Query: 982  SFEPWLGQGLEVKMCGLHPVYMDEVEELDQTTNQP 1016
            SF  W  + LEVK CG+  VY  E EE D   + P
Sbjct: 1165 SFGSW-EEKLEVKKCGVRLVY--EGEEKDSHCSFP 1196


>gi|359493394|ref|XP_002279512.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1327

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 377/1155 (32%), Positives = 566/1155 (49%), Gaps = 176/1155 (15%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MD R ++L+ L+ S  +D+R++GI G GG+GKTTIA++VY+ I ++F  + FL +VRE  
Sbjct: 196  MDFRLKELKSLLSSDLNDIRVVGIYGPGGIGKTTIAKIVYNEIQYQFTGASFLQDVRETF 255

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            +KG  + LQ+QLL   +   D    N+  GI+++ SRL+ KKVL+VIDDV  ++QL+S+ 
Sbjct: 256  NKGCQLQLQQQLLHDTVG-NDVEFSNINKGINIIKSRLRSKKVLIVIDDVDRLQQLESVV 314

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            G+ +WFG GS IIIT+RD+HLL  +GV   +K   L+Y+EALQLF+  AFK   P ++ V
Sbjct: 315  GSPKWFGLGSTIIITTRDQHLLVEYGVTISHKATELHYEEALQLFSQHAFKQNVPKEDYV 374

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
             LS  +++YA GLPLAL+VLGS L G ++DEW+S  ++L+  P  EI D+L+ISFDGL  
Sbjct: 375  DLSNCMVQYAQGLPLALKVLGSSLQGMTIDEWKSASDKLKKNPMKEINDVLRISFDGLDP 434

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             +K++FLDIACFFK   + +V+  L+GC       IRVL ++CL+T+ ++ + MHDL+QE
Sbjct: 435  SQKEVFLDIACFFKDECKYFVSRILDGCNLFATCNIRVLCDRCLVTILDSVIQMHDLIQE 494

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHH----------- 349
            +G  IV+ +SP +  K SRLW  +++    ++    E ++GI L N              
Sbjct: 495  MGWAIVREESPGDPCKWSRLWDVDDIHDAFSKQERFEELKGIDLSNSKQLVKMPKFSSMP 554

Query: 350  -------ENEVYLCASAKAFSKMTNLRLLKICNLQ----LPNGLEYLSNRLRLLGWRGYP 398
                   E    LC    +   + +L  L +   +     P+ +++ S  +  L      
Sbjct: 555  NLERLNLEGCTSLCELHSSIGDLKSLTYLNLGGCEQLRSFPSSMKFESLEVLYLNCCPNL 614

Query: 399  LKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPN-L 457
             KF   +  M+   E+Y+  S I EL   I +L  L+V+ LS   N  + P+  G    L
Sbjct: 615  KKFPKIHGNMECLKELYLNESGIQELPSSIVYLASLEVLNLSDCSNFEKFPEIHGNMKFL 674

Query: 458  EKLILEGCTR-----------------------LYEIHPSLLLHNKLIILNMKDCTSLIT 494
             +L LEGC++                       + E+  S+     L IL++  C+    
Sbjct: 675  RELYLEGCSKFENFPDTFTYMGHLRGLHLRKSGIKELPSSIGYLESLEILDISCCSKFEK 734

Query: 495  LPG-KILMKSLEKLNLKS-----LPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSE 548
             P  +  MK L+ L L+      LP +I  L  L  L +   LKF +F ++  +M  L E
Sbjct: 735  FPEIQGNMKCLKNLYLRKTAIQELPNSIGSLTSLEILSLEKCLKFEKFSDVFTNMGRLRE 794

Query: 549  LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR-------------- 594
            L L  + I+ LP SI  L  L  LNL  C + E  P    N+KCL+              
Sbjct: 795  LCLYRSGIKELPGSIGYLESLENLNLSYCSNFEKFPEIQGNMKCLKELSLDNTAIKKLPN 854

Query: 595  ---------SLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNL 645
                     SL LSGCS L++FPEI ++M +L  LFLD T+I+ +P S+  LT+L+ LNL
Sbjct: 855  SIGRLQALGSLTLSGCSNLERFPEIQKNMGNLWALFLDETAIEGLPYSVGHLTRLDRLNL 914

Query: 646  SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWY 705
             +CKNL  LP+SI  LKSL+ L+L+GC  L+   E    +E LE L +  T +    S  
Sbjct: 915  ENCKNLKSLPNSICELKSLEGLSLNGCSNLKAFSEITEDMEQLERLFLCETGISELPSSI 974

Query: 706  SYI----PINLMRKSVALKLPSLSG--------------------------LCSLRKLNL 735
             ++     + L+     + LP+  G                           C L  L+L
Sbjct: 975  EHLRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSLQCCLTMLDL 1034

Query: 736  TDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQL 795
              CNLME  +PSD+  L  L  L +S++    +P  IT L KL  + +  C  L+ + +L
Sbjct: 1035 GGCNLMEEEIPSDLWCLSLLVFLNISESRMRCIPAGITQLCKLRILLMNHCPMLEVIGEL 1094

Query: 796  PPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSN 855
            P ++  +  +GC SL T                           S +           S 
Sbjct: 1095 PSSLGWIEAHGCPSLET-------------------------ETSSSLLWSSLLKHLKSP 1129

Query: 856  TRQHLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFH--VLKNSR 912
             +Q  ++++PGS  IPEW  +Q  G  ++V  P N Y    L+G+ +   FH   L +  
Sbjct: 1130 IQQQFNIIIPGSSGIPEWVSHQRMGCEVSVELPMNWYEDNNLLGFVL--FFHHVPLDDDE 1187

Query: 913  GNNCFGSYPTHQLNCHIGHG-----IYGIGFRDKFGQAGSDHLWLLYLSR-QTCYD---- 962
                 G  P  +L   I HG     +  IGF            W+  LS   TCYD    
Sbjct: 1188 CVRTSGFIPHCKL--EISHGDQSKRLDNIGF-----HPHCKTYWISGLSYGSTCYDSGST 1240

Query: 963  ------------IRLPLE------SNLEPFESNHV-NVSFEPWLGQGLEVKMCGLHPVYM 1003
                        I +P +      +N +    N V N SF        +VK CG+H +Y 
Sbjct: 1241 SDPALWVTYFPQIGIPSKYRSRKWNNFKAHFDNPVGNASFTCGENASFKVKSCGIHLIYA 1300

Query: 1004 DEVEELDQTTNQPSR 1018
             + ++      QPSR
Sbjct: 1301 QDQKQWP----QPSR 1311


>gi|255537139|ref|XP_002509636.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223549535|gb|EEF51023.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1137

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 294/706 (41%), Positives = 424/706 (60%), Gaps = 39/706 (5%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVR-EI 59
           +DSR E+++ L+  GS DVR +GI GMGG+GKTT+A  V+  I+++FE S FL NVR   
Sbjct: 187 VDSRIEQIKELLSIGSVDVRFLGIWGMGGIGKTTLAEAVFYQIAYQFEGSCFLANVRGNF 246

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDM-LGSRLQRKKVLLVIDDVVDVKQLQS 118
              GGL  LQ +LLS+ L+  D  I     G    +   L+ ++VL+V+DD  D +QL  
Sbjct: 247 EKNGGLARLQEELLSKTLEKRDFKIDTPNIGYSFWVKQMLKHRRVLIVVDDANDSEQLDL 306

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G+ +WFG GSRII+TSRD+ +L T  VD++Y+   L + EALQLFN   FK     ++
Sbjct: 307 LVGSHDWFGPGSRIIVTSRDKQVL-TKIVDDIYEVKELVHHEALQLFNQTTFKKKCVPED 365

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
              LS  +I YA G+PLAL+VLGSFL G+S  EW S L++L+  P     ++L+IS+DGL
Sbjct: 366 YSYLSDLVIEYAKGVPLALKVLGSFLFGKSKTEWESALDKLKKAPHRATQNVLKISYDGL 425

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
              EK IFLDIACFF+G   + VT  L+GCGF   IG+ +L++K LIT+ N+ + MHDLL
Sbjct: 426 DAEEKNIFLDIACFFRGESVEMVTKILDGCGFSTKIGLCLLVDKSLITILNDKVEMHDLL 485

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           QE+G++IV ++S +   +R+RLW  E++ HV + + GTE +EG+ L N    N++ L  +
Sbjct: 486 QEMGKEIVLQESKQP-SQRTRLWNHEDILHVFSRNLGTETIEGMCL-NTSMINKIEL--N 541

Query: 359 AKAFSKMTNLRLLKI------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNL 406
           + AF +M NLR LK               ++LP GL+ LSN LR L W GYPLK LP+ +
Sbjct: 542 SNAFGRMYNLRFLKFYQSYIHGGFKECTKIRLPQGLDSLSNELRYLHWHGYPLKSLPARI 601

Query: 407 QMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
            +   + + + YS++  LWKG K L KLKV+ LS+S+ LIR+ + T A NL  + L GC 
Sbjct: 602 HLMNLVVLVLPYSKVKRLWKGCKDLKKLKVIDLSYSQALIRITELTTASNLSYMKLSGCK 661

Query: 467 RLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLD 526
            L  + PS      L  L M  CT                  L+SLP++I  LK L +L 
Sbjct: 662 NLRSM-PSTTRWKSLSTLEMNYCT-----------------KLESLPSSICKLKSLESLS 703

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVT 586
           + G    + FPEI+E M+ L  L L GTAI+ LP SIE L GL  + L+NCR+L  LP +
Sbjct: 704 LCGCSNLQSFPEILESMDRLKVLVLNGTAIKELPSSIERLKGLSSIYLENCRNLAHLPES 763

Query: 587 VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLS 646
             NLK L  L L+ C KL+K PE + ++  L +L +   ++ ++PS +  L+ +  L+LS
Sbjct: 764 FCNLKALYWLFLTFCPKLEKLPEKLSNLTTLEDLSVGVCNLLKLPSHMNHLSCISKLDLS 823

Query: 647 DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD 692
                 +LP S   L +L+ L++S C +L ++PE    +  ++  D
Sbjct: 824 G-NYFDQLP-SFKYLLNLRCLDISSCRRLRSLPEVPHSLTDIDAHD 867



 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 167/552 (30%), Positives = 252/552 (45%), Gaps = 99/552 (17%)

Query: 492  LITLPGKILMKSLEKL-----NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHL 546
            L +LP +I + +L  L      +K L      LK L  +D+S         E+     +L
Sbjct: 594  LKSLPARIHLMNLVVLVLPYSKVKRLWKGCKDLKKLKVIDLSYSQALIRITELTT-ASNL 652

Query: 547  SELHLEGTA-IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
            S + L G   +R +P S      L  L +  C  LE LP ++  LK L SL L GCS L+
Sbjct: 653  SYMKLSGCKNLRSMP-STTRWKSLSTLEMNYCTKLESLPSSICKLKSLESLSLCGCSNLQ 711

Query: 606  KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLK 665
             FPEI+ SM  L  L L+GT+IKE+PSSIE L  L  + L +C+NL  LP S   LK+L 
Sbjct: 712  SFPEILESMDRLKVLVLNGTAIKELPSSIERLKGLSSIYLENCRNLAHLPESFCNLKALY 771

Query: 666  TLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLS 725
             L L+ C KLE +PE L  + +LE+L +                                
Sbjct: 772  WLFLTFCPKLEKLPEKLSNLTTLEDLSV-------------------------------- 799

Query: 726  GLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELED 785
            G+C+L K            LPS + +L  + +L LS N F  LP S  +L  L  +++  
Sbjct: 800  GVCNLLK------------LPSHMNHLSCISKLDLSGNYFDQLP-SFKYLLNLRCLDISS 846

Query: 786  CKRLQSLPQLPPNIRQVRVNGCASLVTL-----LDALKLCKS--DSTMI--ACLDSLKLL 836
            C+RL+SLP++P ++  +  + C SL T+     +  LK   +  D  +I  +C    +  
Sbjct: 847  CRRLRSLPEVPHSLTDIDAHDCRSLETISGLKQIFQLKYTHTFYDKKIIFTSCFKMDESA 906

Query: 837  GNKSLAFSMLREYLEAV---SNTRQHLSVVVPGSEIPEWFMYQNEGSSITVT-RPSNLYN 892
             +  LA +    +++ V   +   +  S+  PGS+IP+WF YQ+EGSSI +   P +  +
Sbjct: 907  WSDFLADAQF--WIQKVAMRAKDEESFSIWYPGSKIPKWFGYQSEGSSIVIQLHPRS--H 962

Query: 893  KKKLVGYAICCVFHVLKNSRGNNCFGSY-PTHQLNCHIGH-----GIYG----IGFRDKF 942
            K  L+G+ +C V         +N F      +QL  + G       +Y     +  ++K+
Sbjct: 963  KHNLLGFTLCVVLAFEDEFEYHNSFFDVLCVYQLKNYRGEYTDCKEVYSSRTHVSGKNKY 1022

Query: 943  GQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLG-------QGLEVKM 995
               GSDH+ L Y           P  S+ E  E ++   SFE +         Q   VK 
Sbjct: 1023 --VGSDHVILFY----------DPNFSSTEANELSYNEASFEFYWQNNESCCMQSSMVKK 1070

Query: 996  CGLHPVYMDEVE 1007
            C   P+Y  E E
Sbjct: 1071 CAAIPLYSREEE 1082


>gi|147862986|emb|CAN78790.1| hypothetical protein VITISV_027418 [Vitis vinifera]
          Length = 1617

 Score =  481 bits (1238), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 318/830 (38%), Positives = 460/830 (55%), Gaps = 111/830 (13%)

Query: 83   SIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLL 142
            +I ++ +G   +      KKVL+V+DDV   +QL  L  N   FG GSRII+TSRD++LL
Sbjct: 853  TISDISEGSYEIRHMFMSKKVLVVLDDVDSDEQLNCLFPNHNAFGLGSRIIVTSRDKYLL 912

Query: 143  KTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGS 202
                VD +Y    LN +EA+QLF++ AF    P +  + LS+ I+ Y  GLPLALEVL S
Sbjct: 913  VRCQVDALYGVKELNCNEAIQLFSLHAFHMNSPQKGFINLSSCIVDYCKGLPLALEVLSS 972

Query: 203  FLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVT 262
            FL G+   EW+S L+RLE EP  +I  +L   F+ L  LE++I      FF G D D+V 
Sbjct: 973  FLFGKKKIEWKSVLQRLEKEPFLKIQHVLVRGFETLGMLEREI------FFNGEDLDFVQ 1026

Query: 263  NFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWK 322
              L+ C     + ++ L +K LI++ +  L MHDL+Q+ G +IV+RQ+  E GK SRLW 
Sbjct: 1027 RILDACHSFAKLIMQELDDKSLISILDKKLSMHDLMQKAGWEIVRRQNHNEPGKWSRLWD 1086

Query: 323  EEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGL 382
             + V HVLT++T                                               L
Sbjct: 1087 PDNVHHVLTKNT-----------------------------------------------L 1099

Query: 383  EYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHS 442
             YL        W G+ L+ LPSN    K + + + +S I +LWK  K L KL+V+ L +S
Sbjct: 1100 RYLH-------WDGWTLESLPSNFDGKKLVGLSLKHSSIKQLWKEHKCLPKLEVINLGNS 1152

Query: 443  ENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMK 502
            ++L+  P+ + AP LE LIL+GCT L E+HP +    +L ILNMK+C  L   P      
Sbjct: 1153 QHLLECPNLSSAPCLELLILDGCTSLLEVHPPVTKLKRLTILNMKNCKMLHHFP------ 1206

Query: 503  SLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLS 562
                        +I+GL+ L  L++SG  K  +FPEI  +ME L EL+LEGTAI  LP S
Sbjct: 1207 ------------SITGLESLKVLNLSGCSKLDKFPEIQGYMECLVELNLEGTAIVELPFS 1254

Query: 563  IELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL 622
            +  L  LVLL+++NC++L ILP  + +LK L +L LSGCS L++FPEI+  M+ L +L L
Sbjct: 1255 VVFLPRLVLLDMQNCKNLTILPSNIYSLKFLGTLVLSGCSGLERFPEIMEVMECLQKLLL 1314

Query: 623  DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
            DG SIKE+P SI  L  L+ L+L  CKNL  LP+SI +L+SL+TL +SGC KL  +PE L
Sbjct: 1315 DGISIKELPPSIVHLKGLQSLSLRKCKNLKSLPNSICSLRSLETLIVSGCSKLSKLPEEL 1374

Query: 683  GQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLME 742
            G++   E  D                        + L+LP LSGL SL+ L+L+ CNL +
Sbjct: 1375 GRLLHRENSD-----------------------GIGLQLPYLSGLYSLKYLDLSGCNLTD 1411

Query: 743  GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
             ++  ++G+L  L+EL LS+N+ V++P  +  LS L  + +  CKRL+ + +LPP+I+ +
Sbjct: 1412 RSINDNLGHLRFLEELNLSRNNLVTIPEEVNRLSHLRVLSVNQCKRLREISKLPPSIKLL 1471

Query: 803  RVNGCASLVTL----LDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNT-- 856
                C SL +L      + +   S S +     + KL    +LA   +   LE +     
Sbjct: 1472 DAGDCISLESLSVLSPQSPQYLSSSSRLHPV--TFKLTNCFALAQDNVATILEKLHQNFL 1529

Query: 857  -RQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
                 S+V+PGS IPEWF + + GSS+T+  P N +N ++ +G+A CCV 
Sbjct: 1530 PEIEYSIVLPGSTIPEWFQHPSIGSSVTIELPRNWHN-EEFLGFAXCCVL 1578


>gi|359495270|ref|XP_002276075.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1154

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 309/776 (39%), Positives = 441/776 (56%), Gaps = 80/776 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D+R +++   +  GS D  M+GI GMGG+GKTT+AR +Y  I+ +FEA  F +NV E  
Sbjct: 192 IDARMQEIEMRLCLGSDDFLMVGIWGMGGIGKTTLARAIYRKITCQFEACCFFENVGEDL 251

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +K GL+ LQ++ L+QLL+  + ++      +  +  RL  KKVL+V+D+V D   L+ L 
Sbjct: 252 AKEGLIGLQQKFLAQLLEEPNLNM----KALTSIKGRLHSKKVLIVLDNVNDPIILKCLV 307

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           GN +WFG GSRIIIT+RD+ LL +HGV   Y+    NYDEA +     + K   P  + +
Sbjct: 308 GNYDWFGRGSRIIITTRDKRLLISHGVLNYYEAQRFNYDEASEFLTPYSLKHKIPCDDFM 367

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           ++S  +I YA GLPLALEVLGSFL   + +EWR+ L++L+  P  +I ++L++S+DGL +
Sbjct: 368 EVSKEVIGYAQGLPLALEVLGSFLFSMTKEEWRNQLDKLKSTPNMKIQEVLKVSYDGLDD 427

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQ 299
            EK I LDIACFFKG D+DYV   L+GCGF  + GIR LI+K L+T+  +N + MHDL+Q
Sbjct: 428 KEKNILLDIACFFKGEDKDYVMEILDGCGFFSLSGIRALIDKSLVTISWSNEIMMHDLIQ 487

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G++IV++QS EE GKRSRLW  E++  VL ++T TE +EGI L+  H E  +Y   + 
Sbjct: 488 EMGREIVRQQSLEEPGKRSRLWFHEDINGVLKKNTATEKIEGIFLNLSHLEEMLYF--TT 545

Query: 360 KAFSKMTNLRLLKI------------------CNLQLPNGLEYLSNRLRLLGWRGYPLKF 401
           +A + M  LRLLK+                  C +      ++  + LR L + GY LK 
Sbjct: 546 QALAGMNRLRLLKVYNSKNISRNFKDTSNMENCKVNFSKDFKFCYHDLRCLYFYGYSLKS 605

Query: 402 LPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLI 461
           LP++      +E+ M YSRI +LWKGIK L  LK M LSHS+ LI  P+F G  NL++L+
Sbjct: 606 LPNDFNPKNLVELSMPYSRIKQLWKGIKVLANLKFMDLSHSKYLIETPNFRGVTNLKRLV 665

Query: 462 LEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKC 521
           LEGC  L ++H SL     LI LN+K+C                   LKSLP++   LK 
Sbjct: 666 LEGCVSLRKVHSSLGDLKNLIFLNLKNCQM-----------------LKSLPSSTCDLKS 708

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCR--- 578
           L T  +SG  KF+EFPE    +E L EL+ +  AI  LP S   L  L +L+ K C+   
Sbjct: 709 LETFILSGCSKFKEFPENFGSLEMLKELYADEIAIGVLPSSFSFLRNLQILSFKGCKGPS 768

Query: 579 -SLEILPVTVSN-----------LKCLRSLKLSGCSKLKKFPE--IVRSMKDLSELFLDG 624
            +L +LP   SN           L+ L  L LS C+ L   P    +  +  L EL+L G
Sbjct: 769 STLWLLPRRSSNSIGSILQPLSGLRSLIRLNLSNCN-LSDEPNLSSLGFLSSLEELYLGG 827

Query: 625 TSIKEVPSSIELLTKLELLNLSDCKNLV---RLPSSI-------------IALKSLKTLN 668
                +PS+I  L+ L LL L +CK L     LPSSI             ++ + LK+L 
Sbjct: 828 NDFVTLPSTISQLSNLTLLGLENCKRLQVLPELPSSIYYICAENCTSLKDVSYQVLKSLL 887

Query: 669 LSGCF-KLENVPETLGQIESLEELDIS--GTAVPHSTSWYSYIP-INLMRKSVALK 720
            +G   K + +   +    +L  L+ S  G  +PH  S+    P + L   +VALK
Sbjct: 888 PTGQHQKRKFMVPVVKPDTALAVLEASNPGIRIPHRASYQRIDPVVKLGIATVALK 943



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 168/574 (29%), Positives = 256/574 (44%), Gaps = 82/574 (14%)

Query: 549  LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
            L+  G +++ LP        LV L++   R ++ L   +  L  L+ + LS    L + P
Sbjct: 596  LYFYGYSLKSLPNDFNP-KNLVELSMPYSR-IKQLWKGIKVLANLKFMDLSHSKYLIETP 653

Query: 609  EIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL 667
               R + +L  L L+G  S+++V SS+  L  L  LNL +C+ L  LPSS   LKSL+T 
Sbjct: 654  NF-RGVTNLKRLVLEGCVSLRKVHSSLGDLKNLIFLNLKNCQMLKSLPSSTCDLKSLETF 712

Query: 668  NLSGCFKLENVPETLGQIESLEEL---DISGTAVPHSTSWYSYIPINLMR---------- 714
             LSGC K +  PE  G +E L+EL   +I+   +P S S+   + I   +          
Sbjct: 713  ILSGCSKFKEFPENFGSLEMLKELYADEIAIGVLPSSFSFLRNLQILSFKGCKGPSSTLW 772

Query: 715  -------KSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS 767
                    S+   L  LSGL SL +LNL++CNL +    S +G L SL+ELYL  N FV+
Sbjct: 773  LLPRRSSNSIGSILQPLSGLRSLIRLNLSNCNLSDEPNLSSLGFLSSLEELYLGGNDFVT 832

Query: 768  LPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL----VTLLDAL------ 817
            LP++I+ LS L  + LE+CKRLQ LP+LP +I  +    C SL      +L +L      
Sbjct: 833  LPSTISQLSNLTLLGLENCKRLQVLPELPSSIYYICAENCTSLKDVSYQVLKSLLPTGQH 892

Query: 818  -------KLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVV-----VP 865
                    + K D T +A L++     N  +       Y       +  ++ V     +P
Sbjct: 893  QKRKFMVPVVKPD-TALAVLEA----SNPGIRIPHRASYQRIDPVVKLGIATVALKAFIP 947

Query: 866  GSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAI----CCVFHVLKNSRGNNCFGSYP 921
            GS IP+W  YQ+ GS +    P N +N    +G+A     C  F  L   + +  F    
Sbjct: 948  GSRIPDWIRYQSSGSEVKAELPPNWFN-SNFLGFAFSFVTCGHFSCLFMLKADVLFDWTS 1006

Query: 922  THQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNV 981
                +      +  I F+ +     +DH+ L Y          +PL       +  H+ V
Sbjct: 1007 RDDSSSVDIIIVEMISFKRRL---ETDHVCLCY----------VPLPQLRNCSQVTHIKV 1053

Query: 982  SFEPWLGQG-LEVKMCGLHPVYMDEVEELDQTTNQPSRFTVYNLNEFDQHFVGSKMIVAT 1040
            SF     +G +E+K CG+  VY +E    D   N P      +++           +V  
Sbjct: 1054 SFMAVSREGEIEIKRCGVGVVYSNE----DGNHNNPPMIRFNSISSPPPPPRSKSTVV-- 1107

Query: 1041 TSKRSLTEYFGAEASGSGCCDDEEPQPKRFRELE 1074
                 L E    E SG+GC + +  +  R R LE
Sbjct: 1108 -----LEEIHEEEPSGNGCSNVDGSEEVR-RNLE 1135


>gi|105922482|gb|ABF81419.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1121

 Score =  478 bits (1229), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 317/725 (43%), Positives = 438/725 (60%), Gaps = 63/725 (8%)

Query: 1   MDSRCEKLR-FLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           MD R E++  +L     +DVR+IGICGMGG+GKTTIAR VY+ +   FE S FL NVRE+
Sbjct: 195 MDWRLEEMSLYLGVEQLNDVRVIGICGMGGIGKTTIARAVYEKMLGHFEGSSFLANVREV 254

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVI-DDVVDVKQLQS 118
             K GLV LQ QLLS  L      I +V  G++ +  RL R +++LV+ DDV  + QL+S
Sbjct: 255 EEKHGLVRLQEQLLSDTLMDRRTKISDVHRGMNEIRVRL-RSRMVLVVLDDVDQLVQLES 313

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G+R WF +GSR+IIT+RDE LLK  GVD++Y+   LN  EA+QLF +KAF++Y P ++
Sbjct: 314 LVGDRNWFDNGSRVIITTRDELLLKQFGVDKIYRVASLNNIEAVQLFCLKAFRSYCPPED 373

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSG-RSVDEWRSTLERLEIEPPSEILDILQISFDG 237
            V  + ++++YA GLPLAL VLGSF SG RSV+ W  +L+RL+  P   ILD L+ISFDG
Sbjct: 374 YVLQTIQVVKYADGLPLALHVLGSFFSGIRSVELWNHSLKRLKDIPDKGILDKLKISFDG 433

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDL 297
           L E+EKKIFLDIACFF G + D VT  +E  GF+P IGIR+L+EK LI + +N +WMHDL
Sbjct: 434 LNEVEKKIFLDIACFFNGWEEDCVTKLMESSGFYPQIGIRILVEKFLINISDNRVWMHDL 493

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTEST----------------------- 334
           LQE+G+QIV+R+S EE GKR+RLW  E+V HVL  +T                       
Sbjct: 494 LQEMGRQIVKRESHEEPGKRTRLWLCEDVIHVLLNNTVNNLLLQPQFYVSDFEFPFSCSS 553

Query: 335 ---------GTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYL 385
                    GT+ VEGIVL++    + +YL  SA++  KM  LR+LK+ N+ L   ++YL
Sbjct: 554 FLFINFTVQGTDKVEGIVLNSNDEVDGLYL--SAESIMKMKRLRILKLQNINLSQEIKYL 611

Query: 386 SNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENL 445
           SN LR L W  YP K LPS  Q DK +E++M +S I +LW+G   L  L+ + L HS NL
Sbjct: 612 SNELRYLEWCRYPFKSLPSTFQPDKLVELHMRHSSIKQLWEG--PLKLLRAIDLRHSRNL 669

Query: 446 IRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLE 505
           I+ PDF   PNLEKL LEGC +L +I  S+ +   L+ LN+KDC                
Sbjct: 670 IKTPDFRQVPNLEKLNLEGCRKLVKIDDSIGILKGLVFLNLKDC---------------- 713

Query: 506 KLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIEL 565
            + L  LPT I  LK L  L++ G  K  + PE++ ++ +L EL +  TAI  LP +  L
Sbjct: 714 -VKLACLPTNICELKTLRILNLYGCFKLEKLPEMLGNVINLEELDVGRTAITQLPSTFGL 772

Query: 566 LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT 625
              L +L+   C+     P +  +L   RSL  + C  +      + ++  L++L L   
Sbjct: 773 WKKLKVLSFDGCKGPA--PKSWYSLFSFRSLPRNPCP-ITLMLSSLSTLYSLTKLNLSNC 829

Query: 626 SI--KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLG 683
           ++   E+P  +     LE L+L    N VR+PSSI  L  LK+L L  C KL+++P+   
Sbjct: 830 NLMEGELPDDMSCFPSLEELDLIG-NNFVRIPSSISRLSKLKSLRLGNCKKLQSLPDLPS 888

Query: 684 QIESL 688
           ++E L
Sbjct: 889 RLEYL 893



 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 133/355 (37%), Positives = 188/355 (52%), Gaps = 51/355 (14%)

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDC 648
           LK LR++ L     L K P+  R + +L +L L+G   + ++  SI +L  L  LNL DC
Sbjct: 655 LKLLRAIDLRHSRNLIKTPDF-RQVPNLEKLNLEGCRKLVKIDDSIGILKGLVFLNLKDC 713

Query: 649 KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---------- 698
             L  LP++I  LK+L+ LNL GCFKLE +PE LG + +LEELD+  TA+          
Sbjct: 714 VKLACLPTNICELKTLRILNLYGCFKLEKLPEMLGNVINLEELDVGRTAITQLPSTFGLW 773

Query: 699 -------------PHSTSWYSYIPINLMRKS---VALKLPSLSGLCSLRKLNLTDCNLME 742
                        P   SWYS      + ++   + L L SLS L SL KLNL++CNLME
Sbjct: 774 KKLKVLSFDGCKGPAPKSWYSLFSFRSLPRNPCPITLMLSSLSTLYSLTKLNLSNCNLME 833

Query: 743 GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
           G LP D+    SL+EL L  N+FV +P+SI+ LSKL ++ L +CK+LQSLP LP  +  +
Sbjct: 834 GELPDDMSCFPSLEELDLIGNNFVRIPSSISRLSKLKSLRLGNCKKLQSLPDLPSRLEYL 893

Query: 803 RVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSV 862
            V+GCASL TL +  + C     +             SL F    E  +   N       
Sbjct: 894 GVDGCASLGTLPNLFEECARSKFL-------------SLIFMNCSELTDYQGN------- 933

Query: 863 VVPGSEIPEWFMYQNEGSSITVT-RPSNLYNKKKLVGYAICCVFHVLKNSRGNNC 916
           +  GSEIP WF +++ G S+T+   P   ++  K +G A+C  F  L    G++C
Sbjct: 934 ISMGSEIPSWFHHKSVGHSLTIRLLPYEHWSSSKWMGLAVCAFFEELDC--GDSC 986


>gi|332330342|gb|AEE43928.1| TIR-NBS-LRR resistance protein muRdr1D [Rosa multiflora]
          Length = 1156

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 301/697 (43%), Positives = 431/697 (61%), Gaps = 24/697 (3%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MDS+ E++  L+D  ++DVR IGI GMGG+GKTT+AR+VY  ISH+FE   FL NVRE S
Sbjct: 198 MDSKLEEIDVLLDKEANDVRFIGIWGMGGIGKTTLARLVYLKISHQFEVCIFLANVREAS 257

Query: 61  -SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            +  GLV LQ+Q+LSQ+LK  +  +WNV+ GI ++   +  K VLL++DDV   +QL +L
Sbjct: 258 KTTYGLVDLQKQILSQILKEENVQVWNVYSGITIIKKCVCNKAVLLILDDVDQSEQLDNL 317

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G ++ FG  SRIIIT+RD H+L THGV++ Y+  GLN DEALQLF+ KAF+  +P +  
Sbjct: 318 VGEKDCFGLRSRIIITTRDRHVLVTHGVEKPYELKGLNEDEALQLFSWKAFRNCKPEEYY 377

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            +     + YA GLPLAL++LGSFL+GR+ DEW S L +L+  P   + +IL+ISFDGL 
Sbjct: 378 AEPCKSFVMYAAGLPLALKILGSFLNGRTPDEWNSALAKLQQTPYRTVFEILKISFDGLD 437

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLL 298
           E+EKKIFLDIACF +    +++   ++       I   VL EK L+T+  NN + +HDL+
Sbjct: 438 EVEKKIFLDIACFRRLYRNEFMIELVDSSDPCNRITRSVLAEKSLLTISSNNQVDVHDLI 497

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
            E+G +IV RQ  EE G RSRL   +++ HV T +TGTE +EGI+LD    E   +   +
Sbjct: 498 HEMGCEIV-RQENEEPGGRSRLCLRDDIFHVFTMNTGTEAIEGILLDLAELEEADW---N 553

Query: 359 AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
            +AF KM  L+LL I NL+L  G +YL N LR L W  YP K LP   Q D+  E+ + Y
Sbjct: 554 FEAFFKMCKLKLLYIHNLRLSLGPKYLPNALRFLKWSWYPSKSLPPGFQPDELAELSLAY 613

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           S+I  LW GIK+L KLK + LS+S NL R PDFTG  NLEKL+L+GCT L +IHPS+ L 
Sbjct: 614 SKIDHLWNGIKYLGKLKSIDLSYSINLKRTPDFTGIQNLEKLVLKGCTNLVKIHPSIALL 673

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLK 532
            +L I N ++C S+ +LP ++ M+ LE  +      LK +P  +  +K LS L + G   
Sbjct: 674 KRLKIWNFRNCKSIKSLPSEVNMEFLETFDVSGCSKLKMIPEFVGQMKRLSKLCLGG-TA 732

Query: 533 FREFPEIVEHM--EHLSELHLEGTAIRGLPLSI------ELLSGLVLLNLKNCRSLEILP 584
             + P  +EH+  E L EL L+G  +R  P S        ++S   L   K+   L  L 
Sbjct: 733 VEKLPSSIEHLMSESLVELDLKGIFMREQPYSFFLKLQNRIVSSFGLFPRKSPHPLVPLL 792

Query: 585 VTVSNLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELL 643
            ++ +   L +L L+ C+  + + P  + S+  L  L L G +   +P SI LL KL+ +
Sbjct: 793 ASLKHFSSLTTLNLNDCNLCEGEIPNDIGSLSSLERLELRGNNFVSLPVSIHLLFKLQGI 852

Query: 644 NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
           ++ +CK L +LP   ++ +SL+ +    C  L+ +P+
Sbjct: 853 DVQNCKRLQQLPDLPVS-RSLQ-VKSDNCTSLQVLPD 887



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 174/541 (32%), Positives = 256/541 (47%), Gaps = 94/541 (17%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
            L+S+ LS    LK+ P+    +++L +L L G T++ ++  SI LL +L++ N  +CK++
Sbjct: 629  LKSIDLSYSINLKRTPDFT-GIQNLEKLVLKGCTNLVKIHPSIALLKRLKIWNFRNCKSI 687

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV------------- 698
              LPS +  ++ L+T ++SGC KL+ +PE +GQ++ L +L + GTAV             
Sbjct: 688  KSLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQMKRLSKLCLGGTAVEKLPSSIEHLMSE 746

Query: 699  ---------------PHS---------TSWYSYIPINLMRKSVALKLPSLSGLCSLRKLN 734
                           P+S          S +   P       V L L SL    SL  LN
Sbjct: 747  SLVELDLKGIFMREQPYSFFLKLQNRIVSSFGLFPRKSPHPLVPL-LASLKHFSSLTTLN 805

Query: 735  LTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ 794
            L DCNL EG +P+DIG+L SL+ L L  N+FVSLP SI  L KL  I++++CKRLQ LP 
Sbjct: 806  LNDCNLCEGEIPNDIGSLSSLERLELRGNNFVSLPVSIHLLFKLQGIDVQNCKRLQQLPD 865

Query: 795  LPPNIR-QVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLA---FSMLREYL 850
            LP +   QV+ + C SL  L D   LC+     + C++ L  +GN+  +   +S+L+  L
Sbjct: 866  LPVSRSLQVKSDNCTSLQVLPDPPDLCRLSYFSLNCVNCLSTVGNQDASYFLYSVLKRLL 925

Query: 851  EA--------------------------VSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
            E                              + +    V+PGSEIPEWF  Q+ G S+T 
Sbjct: 926  EVLSLSLSLSLSLSLSQWLCDMMVHMQETPRSFRRFRFVIPGSEIPEWFDNQSVGDSVTE 985

Query: 885  TRPSNLYNKKKLVGYAICCVFHVLKN-SRGNNCFGSYP-THQLNCHI-GHGIYGIGFRDK 941
              PS   N  K +G+A+C +F    N S      G  P T ++ C     GI   G    
Sbjct: 986  KLPSGACN-NKWIGFAVCALFVPQDNPSAVPEDPGLVPDTCEIWCRWNSDGISSGGHGFP 1044

Query: 942  FGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQG----LEVKMCG 997
              Q  SDHL+LL          R P       +  N V   F+     G    ++VK CG
Sbjct: 1045 VKQFVSDHLFLLVFPSP----FRNP------DYTWNEVKFFFKVTRAVGNNTCIKVKKCG 1094

Query: 998  LHPVYMDEVEELDQTTNQP--SRFTVYN--LNEFDQHFVGSKMIVATT-SKRSLTEYFGA 1052
            +  +Y  + EEL    NQ   S  ++Y   ++E +   V +K   AT+ S  S  EY+ A
Sbjct: 1095 VRALYEHDTEELISKMNQSKGSSISLYEEAMDEQEGAMVKAKQEAATSGSGVSDDEYYSA 1154

Query: 1053 E 1053
            E
Sbjct: 1155 E 1155


>gi|359493561|ref|XP_002268895.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1080

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 339/982 (34%), Positives = 499/982 (50%), Gaps = 147/982 (14%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD   E+L+ L+     DVRM+GI G+GG+GKTTIA++VY+ I  +F  + FL+ V+  S
Sbjct: 4   MDVHLEELKSLLKMQLDDVRMVGIYGIGGIGKTTIAKMVYNDILCQFNGASFLEGVKNRS 63

Query: 61  S-KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
                 + L ++LL  +++     + +++DG++M+  RL  KKVL+V  DV D  ++Q L
Sbjct: 64  QCNNDRLQLLQELLHGIMEGGHLKLESIYDGMNMIKGRLGSKKVLVVFYDVDDSDKVQRL 123

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
             + EWFG GSRIIIT+RD+ LL  +GV   Y+   L   EA++LF+  AFK     ++ 
Sbjct: 124 VRSYEWFGPGSRIIITTRDKQLLDEYGVHASYEAKVLEDKEAIELFSWHAFKVQNIREDY 183

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V +S R++ YA GLPLALEVLGS L  ++ DEW+S +E+L+  P  +I D+L+IS DGL 
Sbjct: 184 VDMSNRLVDYAKGLPLALEVLGSSLYNKTKDEWKSAIEKLKKNPNRKINDMLKISLDGLD 243

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           + + ++FLDIACF KG  +D +   L+    H    IRVL ++CLIT+    + MHDL+Q
Sbjct: 244 DSQVEVFLDIACFLKGEAKDCILRILDD---HAEYDIRVLRDRCLITISATRVQMHDLIQ 300

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           ++G  I++ + P    KR+RLW  +++   L+   G E VE I  D    ++   +  + 
Sbjct: 301 QMGWSIIREKHP---SKRTRLWDIDDIHKALSAQEGMEQVEAISYDLSRSKD---IQVNK 354

Query: 360 KAFSKMTNLRLLKI------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
           K +  M  LR LK+              + LP   E+ S  LR L W  YPL+ LPSN  
Sbjct: 355 KVYENMKKLRFLKLYWGDYHGSMTKTYKVFLPKDCEFPSQELRYLYWEAYPLQTLPSNFN 414

Query: 408 MDKTIEIYMCYSRIGELWKG--IKH-------LDKLKVMILSHSENLIRMPDFTGA---- 454
            +  +E++M  S I +LWKG  I H       +  L+ + L+  E L + P+  G     
Sbjct: 415 GENLVELHMRNSTIKQLWKGRKIAHQNAKLSSMPNLEELYLAFCERLKKFPEIRGNMGSL 474

Query: 455 --------------------PNLEKLILEGCTRLYEIHPSL--LLHNKLII--------- 483
                               P LE L L GC    +   +   L H + I          
Sbjct: 475 RILYLGQSGIKEIPSSIEYLPALEFLTLWGCRNFDKFQDNFGNLRHRRFIQAKKADIQEL 534

Query: 484 ------------LNMKDCTSLITLPGKILMKSLEKLNL-----KSLPTTISGLKCLSTLD 526
                       L + DC++L   P   +MK LE L L     K LP     L+ L  L 
Sbjct: 535 PNSFGYLESPQNLCLDDCSNLENFPEIHVMKRLEILWLNNTAIKELPNAFGCLEALQFLY 594

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVT 586
           +SG   F EFPEI ++M  L  L L  TAI+ LP SI  L+ L  LNL+NC++L  LP +
Sbjct: 595 LSGCSNFEEFPEI-QNMGSLRFLRLNETAIKELPCSIGHLTKLRDLNLENCKNLRSLPNS 653

Query: 587 VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLS 646
           +  LK L  L ++GCS L  FPEI+  MK L EL L  T I E+P SIE L  L  L L+
Sbjct: 654 ICGLKSLEVLNINGCSNLVAFPEIMEDMKHLGELLLSKTPITELPPSIEHLKGLRRLVLN 713

Query: 647 DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYS 706
           +C+NLV LP+SI  L  L++L +  C KL N+P+ L  ++                    
Sbjct: 714 NCENLVTLPNSIGNLTHLRSLCVRNCSKLHNLPDNLRSLQ-------------------- 753

Query: 707 YIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFV 766
                                C LR+L+L  CNLM+GA+PSD+  L SL+ L +S++   
Sbjct: 754 ---------------------CCLRRLDLAGCNLMKGAIPSDLWCLSSLRFLDVSESPIP 792

Query: 767 SLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTM 826
            +PT+I  LS L  + +  C+ L+ +P+LP  +  +   GC  + T      L    S +
Sbjct: 793 CIPTNIIQLSNLRTLRMNHCQMLEEIPELPSRLEVLEAPGCPHVGT------LSTPSSPL 846

Query: 827 IACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHL------SVVVPGS-EIPEWFMYQNEG 879
            + L +L         F    +Y E   ++   +       VV+PGS  IPEW  +Q+ G
Sbjct: 847 WSSLLNL---------FKSRTQYCECEIDSNYMIWYFHVPKVVIPGSGGIPEWISHQSMG 897

Query: 880 SSITVTRPSNLYNKKKLVGYAI 901
               +  P N Y     +G+A+
Sbjct: 898 RQAIIELPKNRYEDNNFLGFAV 919


>gi|359493489|ref|XP_002264004.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1092

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 295/695 (42%), Positives = 423/695 (60%), Gaps = 46/695 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MDSR E L  L+  GS+DVR +GI GM G+GKTTIA  +YD I  +F+   FL +VRE S
Sbjct: 199 MDSRMEDLLSLLCIGSNDVRFVGIWGMAGIGKTTIAEAIYDRIYTKFDGCCFLKDVREDS 258

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            + GL  LQ  LLS++L      I N+  GI+ + +RL  KKVL+V+D+VV  ++L++L 
Sbjct: 259 QRHGLTYLQETLLSRVL----GGINNLNRGINFIKARLHSKKVLIVLDNVVHRQELEALV 314

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G+ +WFG GSRIIIT+R++ LL    +D +Y+   L YDEAL+LF   AF+   P ++ +
Sbjct: 315 GSHDWFGPGSRIIITTREKRLLIEQEMDAIYEVEKLEYDEALKLFCQYAFRYKHPTEDFM 374

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           QL    + Y G LPLAL+VLGS L  +S+ EW+S L++    P  E+L++L+ SFDGL +
Sbjct: 375 QLCHHAVDYTGSLPLALKVLGSCLYRKSIHEWKSELDKFNQFPNKEVLNVLKTSFDGLDD 434

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            EK +FLDIA F+KG D+D+V   L+   F PV  I  L++K LIT+ +N L+MHDLLQE
Sbjct: 435 NEKNMFLDIAFFYKGEDKDFVIEVLD--NFFPVSEIGNLVDKSLITISDNKLYMHDLLQE 492

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G +IV+++S ++ GKRSRL   E++  VLT + GTE VEG+V D      E+ L  S  
Sbjct: 493 MGWEIVRQESIKDPGKRSRLRVHEDIHDVLTTNKGTEAVEGMVFD-LSASKELNL--SVD 549

Query: 361 AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
           AF+KM  LRLL+  NL L    ++ SN LR L W GYPLK LPSN   +K +E+ MCYS 
Sbjct: 550 AFAKMNKLRLLRFYNLHLSRDFKFPSNNLRSLHWHGYPLKSLPSNFHPEKLVELNMCYSL 609

Query: 421 IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
           + +LW+G K  +KLK + LSHS++L + PDF+ AP L ++IL GCT L ++HPS+    +
Sbjct: 610 LKQLWEGKKAFEKLKFIKLSHSQHLTKTPDFSAAPKLRRIILNGCTSLVKLHPSIGALKE 669

Query: 481 LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
           LI LN++ C+                  L++LP +I  L  L TL +SG  K ++ P+ +
Sbjct: 670 LIFLNLEGCS-----------------KLENLPQSICELISLQTLTLSGCSKLKKLPDDL 712

Query: 541 EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNC-------------RSLEILPVT- 586
             ++ L EL+++GT I+ +  SI LL+ L  L+L  C             RS    P+  
Sbjct: 713 GRLQCLVELNVDGTGIKEVTSSINLLTNLEALSLAGCKGGGSKSRNLISFRSSPAAPLQL 772

Query: 587 --VSNLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELL 643
             +S L  L+SL LS C+ L+   P  + S+  L  L+LD  S   +P+S+  L++L  L
Sbjct: 773 PFLSGLYSLKSLNLSDCNLLEGALPSDLSSLSSLENLYLDKNSFITLPASLSRLSRLRSL 832

Query: 644 NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
            L  CK+L  LP       S++ LN   C  LE +
Sbjct: 833 TLEHCKSLRSLPE---LPSSIEYLNAHSCTSLETL 864



 Score =  175 bits (443), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 186/541 (34%), Positives = 263/541 (48%), Gaps = 96/541 (17%)

Query: 525  LDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL-EIL 583
            L +S D KF           +L  LH  G  ++ LP +      LV LN+  C SL + L
Sbjct: 565  LHLSRDFKFPS--------NNLRSLHWHGYPLKSLPSNFHP-EKLVELNM--CYSLLKQL 613

Query: 584  PVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLEL 642
                   + L+ +KLS    L K P+   + K L  + L+G TS+ ++  SI  L +L  
Sbjct: 614  WEGKKAFEKLKFIKLSHSQHLTKTPDFSAAPK-LRRIILNGCTSLVKLHPSIGALKELIF 672

Query: 643  LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHST 702
            LNL  C  L  LP SI  L SL+TL LSGC KL+ +P+ LG+++ L EL++ GT +   T
Sbjct: 673  LNLEGCSKLENLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVELNVDGTGIKEVT 732

Query: 703  SWYSYIPINLM------------------------RKSVA--LKLPSLSGLCSLRKLNLT 736
            S      INL+                        R S A  L+LP LSGL SL+ LNL+
Sbjct: 733  S-----SINLLTNLEALSLAGCKGGGSKSRNLISFRSSPAAPLQLPFLSGLYSLKSLNLS 787

Query: 737  DCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP 796
            DCNL+EGALPSD+ +L SL+ LYL KNSF++LP S++ LS+L ++ LE CK L+SLP+LP
Sbjct: 788  DCNLLEGALPSDLSSLSSLENLYLDKNSFITLPASLSRLSRLRSLTLEHCKSLRSLPELP 847

Query: 797  PNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLK--------------------LL 836
             +I  +  + C SL T      L  S ST  + L  L+                    +L
Sbjct: 848  SSIEYLNAHSCTSLET------LSCSSSTYTSKLGDLRFNFTNCFRLGENQGSDIVETIL 901

Query: 837  GNKSLAFSMLREYLEAVSNTRQH-LSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKK 895
                LA SM +          QH    +VPGS IP+WF +Q+ GS + V  P + YN  K
Sbjct: 902  EGTQLASSMAKLLEPDERGLLQHGYQALVPGSRIPKWFTHQSVGSKVIVELPPHWYN-TK 960

Query: 896  LVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAG---SDHLWL 952
             +G A C VF+      G    G++P   L C +      +   +    +    SDH W 
Sbjct: 961  WMGLAACVVFNFKGAVDGYR--GTFP---LACFLNGRYATLSDHNSLWTSSIIESDHTWF 1015

Query: 953  LYLSRQTCYDIRLPLESNLEPFE---SNHVNVSFEPWLGQGL-----EVKMCGLHPVYMD 1004
             Y+SR         LE+   P+    S+++  SF   + +G      EVK CG+  VY +
Sbjct: 1016 AYISRAE-------LEARYPPWTGELSDYMLASFLFLVPEGAVTSHGEVKKCGVRLVYEE 1068

Query: 1005 E 1005
            +
Sbjct: 1069 D 1069


>gi|356545124|ref|XP_003540995.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1116

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 283/639 (44%), Positives = 393/639 (61%), Gaps = 16/639 (2%)

Query: 18  DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLL 77
           DVR++GI GMGG+GKTT+A V+Y  ISH+++A  F+DNV ++    G   + +QLL Q L
Sbjct: 247 DVRIVGIFGMGGIGKTTLASVLYHRISHQYDACCFIDNVSKVYRDCGPTGVAKQLLHQTL 306

Query: 78  KLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSR 137
              +  I N+ +  +++ SRL+  K L+V+D+V +VKQ + L  NREW G+GSRIII SR
Sbjct: 307 NEENLQICNLHNAANLIQSRLRYVKTLIVLDNVDEVKQQEKLVLNREWLGAGSRIIIISR 366

Query: 138 DEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLAL 197
           D H LK +GV  VYK   LN  ++L+LF  KAF     +    +L+  +++YA  LPLA+
Sbjct: 367 DMHNLKEYGVTSVYKVQLLNGADSLKLFCKKAFNCDDIVGGYKELTYDVLKYANSLPLAI 426

Query: 198 EVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGND 257
           +VLGSFL GRSV EWRS L RL+  P  +ILD+LQIS+DGLQELEK+IFLDIACFF G +
Sbjct: 427 KVLGSFLCGRSVSEWRSALVRLKENPNKDILDVLQISYDGLQELEKQIFLDIACFFSGYE 486

Query: 258 RDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKR 317
             YV   L+ CGFH  IGIRVL++K LI   +  + MHDLL+ LG++IV+  SP E  K 
Sbjct: 487 ELYVKKVLDCCGFHAEIGIRVLLDKSLIDNSHGFIEMHDLLKVLGRKIVKGNSPNEPRKW 546

Query: 318 SRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQ 377
           SRLW  ++  + ++++T T   E IVLD    E  + +   A+A SKM+NLRLL + +++
Sbjct: 547 SRLWLPKDF-YDMSKTTETTNNEAIVLD-MSREMGILMTIEAEALSKMSNLRLLILHDVK 604

Query: 378 LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVM 437
               L+ LSN+L+ L W  YP   LPS+ Q DK +E+ + +S I +LWKGIK+L  L+ +
Sbjct: 605 FMGNLDCLSNKLQFLQWFKYPFSNLPSSFQPDKLVELILQHSNIKKLWKGIKYLPNLRAL 664

Query: 438 ILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPG 497
            LS S+NLI++PDF G PNLE +ILEGCT+L  IHPS+ L  KL  LN+K+C +L++LP 
Sbjct: 665 DLSDSKNLIKVPDFRGVPNLEWIILEGCTKLAWIHPSVGLLRKLAFLNLKNCKNLVSLPN 724

Query: 498 KIL-MKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAI 556
            IL + SLE LN+   P   S       L+   + ++   P I E               
Sbjct: 725 NILGLSSLEYLNISGCPKIFSN----QLLENPINEEYSMIPNIRETAMQSQSTSSSIIK- 779

Query: 557 RGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKD 616
           R +P       G    N   C    +LP ++ +  CL  L LS C+ L + P+ + S+  
Sbjct: 780 RFIPFHFSYSRGSK--NSGGC----LLP-SLPSFSCLHDLDLSFCN-LSQIPDAIGSILS 831

Query: 617 LSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           L  L L G     +PS+I  L+KL  LNL  CK L  LP
Sbjct: 832 LETLNLGGNKFVSLPSTINKLSKLVHLNLEHCKQLRYLP 870



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 217/460 (47%), Gaps = 60/460 (13%)

Query: 587  VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNL 645
            +  L  LR+L LS    L K P+  R + +L  + L+G T +  +  S+ LL KL  LNL
Sbjct: 655  IKYLPNLRALDLSDSKNLIKVPDF-RGVPNLEWIILEGCTKLAWIHPSVGLLRKLAFLNL 713

Query: 646  SDCKNLVRLPSSIIALKSLKTLNLSGCFK------LEN-VPETLGQIESLEELDISGTAV 698
             +CKNLV LP++I+ L SL+ LN+SGC K      LEN + E    I ++ E  +   + 
Sbjct: 714  KNCKNLVSLPNNILGLSSLEYLNISGCPKIFSNQLLENPINEEYSMIPNIRETAMQSQST 773

Query: 699  PHSTSWYSYIPINLM-----RKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLC 753
              S     +IP +       + S    LPSL     L  L+L+ CNL +  +P  IG++ 
Sbjct: 774  SSSII-KRFIPFHFSYSRGSKNSGGCLLPSLPSFSCLHDLDLSFCNLSQ--IPDAIGSIL 830

Query: 754  SLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL 813
            SL+ L L  N FVSLP++I  LSKL+++ LE CK+L+ LP++P       + G  S    
Sbjct: 831  SLETLNLGGNKFVSLPSTINKLSKLVHLNLEHCKQLRYLPEMPTPTALPVIRGIYSFAHY 890

Query: 814  LDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQ---HLSVVVPGSEIP 870
               L        +  C   + +   + +AFS L + L+    +      + ++VPG++IP
Sbjct: 891  GRGL-------IIFNCPKIVDIERCRGMAFSWLLQILQVSQESATPIGWIDIIVPGNQIP 943

Query: 871  EWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIG 930
             WF  +  G+SI++  PS +      +G A   VF V  +          PT  L+    
Sbjct: 944  RWFNNRCVGNSISLD-PSPIMLDNNWIGIACSVVFVVFDD----------PT-SLDNDWK 991

Query: 931  HGIYGIGFRDK-FGQAGS-----------------DHLWLLYLSRQTCYDIRLPLESNLE 972
              I  IGF  K +   GS                  HLWLLYL+R   +     +E  L+
Sbjct: 992  SSI-SIGFETKSYSSRGSPLYIPILLDRNLVTVKLHHLWLLYLTRGEFFSY-FKIEKMLD 1049

Query: 973  PFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEELDQT 1012
             +    ++   +   G  LEV  CG   V+ ++++ L+ T
Sbjct: 1050 LY-GIKMHAMVDNSQGLHLEVCSCGYQWVFEEDLQNLNPT 1088


>gi|147845097|emb|CAN78476.1| hypothetical protein VITISV_009816 [Vitis vinifera]
          Length = 826

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 293/673 (43%), Positives = 408/673 (60%), Gaps = 51/673 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            DSR E++  L+   S+DVRMIGI G+GG+GKTT+A  +Y+ I+H+FE + FL N  E+ 
Sbjct: 190 FDSRLEEMSSLLCMESNDVRMIGIHGIGGIGKTTLAIGIYNQIAHQFEGASFLPNAAEVK 249

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
              G + LQR+LL+ +L      I N+ +GI ++   L  +KVL+++DDV  + QL+ LA
Sbjct: 250 EHRGSLKLQRKLLADILGEKIARISNIDEGISLIKKTLCSRKVLIILDDVSALTQLEFLA 309

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G+R WFGSGSRIIITSR++HLL  H VD +Y+   L  +EA +LF++ AF+         
Sbjct: 310 GSRHWFGSGSRIIITSRNKHLLDVHEVDGLYEVQKLKSEEAFKLFSLYAFEADLXDDRFW 369

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS R + Y  GLPLA++V+G +L  ++  EW   L +L       +  +L++S+D L+ 
Sbjct: 370 ELSGRALNYCDGLPLAVKVVGCYLRXKTELEWEDELLKLTTVGQJTVQYVLRLSYDRLEH 429

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            EK +FLDIACFF+G D D V   L+ C F   IG++VL +   I++ +N + MH L+Q+
Sbjct: 430 TEKDLFLDIACFFRGKDSDSVGRILDSCNF-SAIGMKVLKDCSFISILDNKIEMHGLMQQ 488

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G +I++R+SP + G+RSRLW  E+V  VLT+ TGT+ +EGI  D      E+ +  +++
Sbjct: 489 MGWEIIRRESPGQPGQRSRLWNPEDVHAVLTQKTGTKAIEGISFD-VSASKEIQI--TSE 545

Query: 361 AFSKMTNLRLLKIC----------NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK 410
           A  KMTNLRLL++            + LP   E+ S  LR L W G+ L+ LPSN    K
Sbjct: 546 ALKKMTNLRLLRVYWDGLSSYDSNTVHLPEEFEFPSYELRYLHWDGWSLESLPSNFNGKK 605

Query: 411 TIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYE 470
            +E+ + +S +  LWKG K L+ LKVM LSHS  L+  PD +GAP+LE L L GCT L E
Sbjct: 606 LVELSLKHSSLNHLWKGNKCLENLKVMDLSHSXYLVECPDVSGAPSLETLNLYGCTSLRE 665

Query: 471 IHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGD 530
              SL   N  I                   K LE LNL                  SG 
Sbjct: 666 -DASLFSQNHWI------------------GKKLEVLNL------------------SGC 688

Query: 531 LKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
            +  +FP+I  +ME L ELHLEGTAI  LP S+  L GLVLLN+K+C++L+ILP  + +L
Sbjct: 689 SRLEKFPDIKANMESLLELHLEGTAIIELPSSVGYLRGLVLLNMKSCKNLKILPGRICDL 748

Query: 591 KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKN 650
           K L++L LSGCSKL++ PEI   M+ L EL LDGTSI+E+P SI  L  L LLNL  CK 
Sbjct: 749 KSLKTLILSGCSKLERLPEITEVMEHLEELLLDGTSIRELPRSILRLKGLVLLNLRKCKE 808

Query: 651 LVRLPSSIIALKS 663
           L  L +SI  LKS
Sbjct: 809 LRTLRNSICGLKS 821



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 91/217 (41%), Positives = 113/217 (52%), Gaps = 27/217 (12%)

Query: 488 DCTSLITLPGKILMKSLEKLNLK--SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEH 545
           D  SL +LP     K L +L+LK  SL     G KCL  L V            + H  +
Sbjct: 590 DGWSLESLPSNFNGKKLVELSLKHSSLNHLWKGNKCLENLKVMD----------LSHSXY 639

Query: 546 LSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSN----LKCLRSLKLSGC 601
           L    +E   + G P        L  LNL  C SL       S      K L  L LSGC
Sbjct: 640 L----VECPDVSGAP-------SLETLNLYGCTSLREDASLFSQNHWIGKKLEVLNLSGC 688

Query: 602 SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
           S+L+KFP+I  +M+ L EL L+GT+I E+PSS+  L  L LLN+  CKNL  LP  I  L
Sbjct: 689 SRLEKFPDIKANMESLLELHLEGTAIIELPSSVGYLRGLVLLNMKSCKNLKILPGRICDL 748

Query: 662 KSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
           KSLKTL LSGC KLE +PE    +E LEEL + GT++
Sbjct: 749 KSLKTLILSGCSKLERLPEITEVMEHLEELLLDGTSI 785



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 113/229 (49%), Gaps = 24/229 (10%)

Query: 579 SLEILPVTVSNLKCLR-SLKLSGCSKLKKFPEIVRSMK--DLSE--LFLDGTSIKEVPSS 633
           SLE LP   +  K +  SLK S  + L K  + + ++K  DLS     ++   +   PS 
Sbjct: 593 SLESLPSNFNGKKLVELSLKHSSLNHLWKGNKCLENLKVMDLSHSXYLVECPDVSGAPS- 651

Query: 634 IELLTKLELLNLSDCKNLVRLPSSIIAL-----KSLKTLNLSGCFKLENVPETLGQIESL 688
                 LE LNL  C +L R  +S+ +      K L+ LNLSGC +LE  P+    +ESL
Sbjct: 652 ------LETLNLYGCTSL-REDASLFSQNHWIGKKLEVLNLSGCSRLEKFPDIKANMESL 704

Query: 689 EELDISGTAV---PHSTSWYSYIPINLMRKSVALK-LPS-LSGLCSLRKLNLTDCNLMEG 743
            EL + GTA+   P S  +   + +  M+    LK LP  +  L SL+ L L+ C+ +E 
Sbjct: 705 LELHLEGTAIIELPSSVGYLRGLVLLNMKSCKNLKILPGRICDLKSLKTLILSGCSKLE- 763

Query: 744 ALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSL 792
            LP     +  L+EL L   S   LP SI  L  L+ + L  CK L++L
Sbjct: 764 RLPEITEVMEHLEELLLDGTSIRELPRSILRLKGLVLLNLRKCKELRTL 812



 Score = 48.5 bits (114), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 92/224 (41%), Gaps = 45/224 (20%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV 652
           LR L   G S L+  P      K L EL L  +S+  +    + L  L++++LS    LV
Sbjct: 584 LRYLHWDGWS-LESLPSNFNG-KKLVELSLKHSSLNHLWKGNKCLENLKVMDLSHSXYLV 641

Query: 653 RLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINL 712
             P  +    SL+TLNL GC  L        Q                   W        
Sbjct: 642 ECPD-VSGAPSLETLNLYGCTSLREDASLFSQ-----------------NHWIGK----- 678

Query: 713 MRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSI 772
                            L  LNL+ C+ +E   P    N+ SL EL+L   + + LP+S+
Sbjct: 679 ----------------KLEVLNLSGCSRLE-KFPDIKANMESLLELHLEGTAIIELPSSV 721

Query: 773 THLSKLLNIELEDCKRLQSLPQLPPNIRQVR---VNGCASLVTL 813
            +L  L+ + ++ CK L+ LP    +++ ++   ++GC+ L  L
Sbjct: 722 GYLRGLVLLNMKSCKNLKILPGRICDLKSLKTLILSGCSKLERL 765


>gi|356577113|ref|XP_003556672.1| PREDICTED: putative disease resistance protein At4g11170-like
            [Glycine max]
          Length = 1344

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 383/1140 (33%), Positives = 581/1140 (50%), Gaps = 158/1140 (13%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +D     +  L+  GS +VR+IGI GMGG+GKTTIA  ++  +S ++E S FL NVRE  
Sbjct: 223  IDQNIAPIESLLRIGSKEVRIIGIWGMGGVGKTTIANALFTKLSSQYEGSCFLANVREEY 282

Query: 61   SKGGLVSLQRQLLSQLLKLADN---SIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
               GL  L+ +L S++L+   N   S   V     M   RL++KKVL+V+DDV D K+L+
Sbjct: 283  ENQGLGYLRNKLFSEVLEDDVNLHISTPKVRSTFVM--RRLRQKKVLIVLDDVDDSKKLE 340

Query: 118  SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
             LA   +  GSGS +I+T+RD+H++ + GVDE Y+  GL+   A++LF++ AF    P +
Sbjct: 341  YLAAQHDCLGSGSIVIVTTRDKHVI-SKGVDETYEVKGLSLHHAVRLFSLNAFGKTYPEK 399

Query: 178  ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
                LS +++ +A G PLAL+VLGS L  R+  +W + L +L   P +EI ++L+ S+DG
Sbjct: 400  GFEMLSKQVVDHANGNPLALKVLGSLLHSRNEQQWANALRKLTKVPNAEIQNVLRWSYDG 459

Query: 238  LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWMHD 296
            L   +K +FLDIACFF+G + + V   LE CGF+P IGI++L EK L+T  ++  + MHD
Sbjct: 460  LDYEQKNMFLDIACFFRGENIENVIRLLEICGFYPYIGIKILQEKSLVTFSDDGKVCMHD 519

Query: 297  LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
            L+QE+G +IV R+S ++ G+RSRLW  +EV  VL  + GT+ VEGI+LD     +   L 
Sbjct: 520  LIQEMGWEIVHRESIKDPGRRSRLWDPKEVYDVLKNNRGTDAVEGIILDVSQISD---LP 576

Query: 357  ASAKAFSKMTNLRLLKI-------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMD 409
             S + FS+M N+R LK        CNL LP+GL+ L N+L  L W GYP K LPS    D
Sbjct: 577  LSYETFSRMINIRFLKFYMGRGRTCNLLLPSGLKSLPNKLMYLQWDGYPSKSLPSTFCTD 636

Query: 410  KTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLY 469
              + + M  S + +LW GIK    LK + L  S+ L  +PD + APNLE + +  CT L 
Sbjct: 637  NLVVLSMMESHVEKLWDGIKSFASLKEINLRASKKLTNLPDLSLAPNLETIDVSHCTSLL 696

Query: 470  EIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK---SLPTTISGLKCLSTLD 526
             +  S+    KL++ N++ C +L +LP  I + SLE   L+   SL       + ++ LD
Sbjct: 697  HVPLSIQYVKKLLLFNLESCKNLKSLPINIHLSSLEMFILRRCSSLDEFSVTSQNMTNLD 756

Query: 527  VSGDLKFREFPEIV-EHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
            +  +   ++FPE + EH+  L  L+LE  + ++ L   I L S L  L+L++C SLE   
Sbjct: 757  LR-ETAIKDFPEYLWEHLNKLVYLNLESCSMLKSLTSKIHLKS-LQKLSLRDCSSLEEFS 814

Query: 585  VTVSNLKCLR--------------------SLKLSGCSKLKKFPEIVRSMKDLSELFLDG 624
            VT  N+ CL                     +L L  C KL  FP+  + ++DL  +F +G
Sbjct: 815  VTSENMGCLNLRGTSIKELPTSLWRNNKLFTLVLHSCKKLVNFPDRPK-LEDLPLIF-NG 872

Query: 625  TSIKEVPSSIELLTKLELLNLS-DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLG 683
             S  E P++ E  T   L +LS    ++  LP SI  L SLK L L+ C KL ++P    
Sbjct: 873  VSSSESPNTDEPWTLSSLADLSLKGSSIENLPVSIKDLPSLKKLTLTECKKLRSLPSLPP 932

Query: 684  QIE--SLEELDISGTAVPHSTSWYSYIPI---------------------NLMRKS-VAL 719
             +E  SL+E DI   ++  S    S++ I                     +L+ +S V  
Sbjct: 933  SLEDLSLDESDIECLSL--SIKDLSHLKILTLTNYKKLMSPQDLPSSSKASLLNESKVDS 990

Query: 720  KLPSLSGLCSLRK---------------------LNLTDCNLMEGALPSDIGNLCSLKEL 758
             L S+ GL  L+K                     L+L++ N+    +P  I NL  L++L
Sbjct: 991  HLVSMKGLSHLQKFPLVKWKRFHSLPELPPFLEELSLSESNI--ECIPKSIKNLSHLRKL 1048

Query: 759  YLS---------------KNSFV------SLPTSITHLSKLLNIELEDCKRLQSLPQLPP 797
             +                K+ FV      SLP SI  L  L  I L +CK+LQ LP+LPP
Sbjct: 1049 AIKKCTGLRYLPELPPYLKDLFVRGCDIESLPISIKDLVHLRKITLIECKKLQVLPELPP 1108

Query: 798  NIRQVRVNGCASLVTLLDALKLCKSD--STMIACLDSLKLLGNKSLA---FSMLREYLEA 852
             ++      C SL  +  +  +   D  +    C+   +   N  +A   F      L+ 
Sbjct: 1109 CLQSFCAADCRSLEIVRSSKTVLIEDRYAYYYNCISLDQNSRNNIIADAPFEAAYTSLQQ 1168

Query: 853  VSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF-HVLKNS 911
             +     +S+ +PG+EIP+WF YQ+  SS+ +  P   +   K +G+A+C V    L+NS
Sbjct: 1169 GTPLGPLISICLPGTEIPDWFSYQSTNSSLDMEIPQQWFKDSKFLGFALCLVIGGFLQNS 1228

Query: 912  RG------------NNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSR-- 957
                           + F S P+      +GH    +     F    SDH+++ Y     
Sbjct: 1229 YEGYDPDVKCYHFVKSAFNSDPSVPF---LGHCTTVMQVPQGF---NSDHMFICYYPTFN 1282

Query: 958  ----QTCYDIRLPLESNLEPFESNHVNVSFE---PWLGQGLE-VKMCGLHPVYMDEVEEL 1009
                Q   D+ +  ++N     S  + V F+   P+  Q L+ VK CG+ P+ +   E  
Sbjct: 1283 ASILQDFKDLGMYYDAN-----SLRLRVIFKFKGPY--QRLDIVKKCGVRPLLIANTERF 1335


>gi|356553715|ref|XP_003545198.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1127

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 357/939 (38%), Positives = 507/939 (53%), Gaps = 138/939 (14%)

Query: 1    MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            +DSR EK+  L+     D V  IGI GMGG+GKTT+ARVV+  I ++F+ S FL+NVREI
Sbjct: 197  IDSRVEKMNSLLKLELKDKVCFIGIWGMGGIGKTTLARVVFKKIRNKFDISCFLENVREI 256

Query: 60   SSKG-GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            S    G++SLQ +LLS + K+ D  I N+ +G  ++G  L    VLLV+DDV D++QL++
Sbjct: 257  SQNSDGMLSLQGKLLSHM-KMKDLKIQNLDEGKSIIGGILFNNNVLLVLDDVNDIRQLEN 315

Query: 119  LAGN-REWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
             + N ++W G GSRIII +RD  +L++HG  E YK   LN DE+LQLF+ KAFK  QPL+
Sbjct: 316  FSVNDQKWLGPGSRIIIITRDMEVLRSHGTVESYKIDLLNSDESLQLFSQKAFKRDQPLE 375

Query: 178  ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
              +QLS   ++ AGGLPLA+E++GS   GRS  +W+  LE  E      ++D L IS+DG
Sbjct: 376  HILQLSKVAVQQAGGLPLAIEMMGSSFCGRSESQWKEFLEVKEYTKKDVVMDKLIISYDG 435

Query: 238  LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDL 297
            L    K +FLDIACFF G  +++VT  L  CG +P  GI VLI+K L T   + LWMHDL
Sbjct: 436  LPPSYKILFLDIACFFNGWVKEHVTQILTICGRYPANGIDVLIDKSLATYDGSRLWMHDL 495

Query: 298  LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
            LQE+G++IV  + P + GKRSRLW  ++    L  +   EL++GIVL +           
Sbjct: 496  LQEMGRKIVVEECPIDAGKRSRLWSPQDTDQALKRNKENELIQGIVLQSSTQPYNANW-- 553

Query: 358  SAKAFSKMTNLRLLKIC--NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
              +AFSKM NL+ L I   N+Q+P G++ L + ++ L W G  LK LP  +++++ +E+ 
Sbjct: 554  DPEAFSKMYNLKFLVINYHNIQVPRGIKCLCSSMKFLQWTGCTLKALPLGVKLEELVELK 613

Query: 416  MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
            M YS+I ++W G +H  KLK + LSHSE+LI  P  +G P LE L+LEGC  L E+H S+
Sbjct: 614  MRYSKIKKIWSGSQHFAKLKFIDLSHSEDLIESPIVSGVPCLEILLLEGCINLVEVHQSV 673

Query: 476  LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
              H KL++LN+K C +L TLP K  M SLE+L L                  SG  K ++
Sbjct: 674  GQHKKLVLLNLKGCINLQTLPTKFEMDSLEELIL------------------SGCSKVKK 715

Query: 536  FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
             P   ++M+HLS                       L+NL+ C++L  LP ++ NLK LR 
Sbjct: 716  LPNFGKNMQHLS-----------------------LVNLEKCKNLLWLPKSIWNLKSLRK 752

Query: 596  LKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
            L + GCSK    P  +     L EL + GT I+E+                         
Sbjct: 753  LSICGCSKFSTLPNSMNENGSLEELDVSGTPIREI------------------------T 788

Query: 656  SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRK 715
            SS + L++LK L+  G  +L +                       ++ W  +  I++ R+
Sbjct: 789  SSKVCLENLKELSFGGRNELAS-----------------------NSLWNLHQRISMHRR 825

Query: 716  SVALK---LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTS- 771
                K   LP+LS L SL+ LNL+ C+L + ++P  +G+L SL  L LS N+FVS PT  
Sbjct: 826  QQVPKELILPTLSRLTSLKFLNLSYCDLNDESIPDSLGSLLSLLGLNLSGNNFVSPPTRC 885

Query: 772  ITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL-LDALKLCK-----SDST 825
            I++L  L ++ L DC RL+SLP LPP+ + +       +  L  DA  L K      + T
Sbjct: 886  ISNLHTLQSLTLIDCPRLESLPMLPPSAQCLGTTNSTQMKPLNSDAYMLWKIYELHMNQT 945

Query: 826  MIACLDSLKLLG-------NKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEW----FM 874
                  SL  L        +K  A+ M           R H   ++PG EI +W    F+
Sbjct: 946  YFLYTHSLPTLPLTHPNYFHKVCAYQM---------EDRPHFLFIIPGREIQKWNEVFFL 996

Query: 875  -------YQNEGS----SITVTRPSNLYNKKKLVGYAIC 902
                   Y   GS    SI V  P+ L +   L G AIC
Sbjct: 997  IDPSHHPYNRLGSDSVASIIVDVPNYLVSSGWL-GIAIC 1034


>gi|332330346|gb|AEE43932.1| TIR-NBS-LRR resistance protein muRdr1H [Rosa multiflora]
          Length = 1122

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 297/687 (43%), Positives = 422/687 (61%), Gaps = 57/687 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MDS+ E++  L+D  +++VR IGI GMGG+GKTT+AR+VY  ISH+FE   FLDNVRE+S
Sbjct: 199 MDSKLEEIDVLLDKEANEVRFIGIWGMGGIGKTTLARLVYQKISHQFEVCIFLDNVREVS 258

Query: 61  -SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            +  GLV LQ+++LSQ+ K  +  + +V+ G+ M+   +  K VLLV+DD+   +QL++L
Sbjct: 259 KTTHGLVDLQKKILSQIFKEENVQVLDVYSGMTMIKRCVCNKAVLLVLDDMDQSEQLENL 318

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G ++ FG  SRIIIT+RD H+L THGV++ Y+ +GLN +EALQLF+ KAF+  +P ++ 
Sbjct: 319 VGEKDCFGLRSRIIITTRDRHVLVTHGVEKPYELNGLNKNEALQLFSWKAFRKCEPEEDF 378

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            +L    + YAGGLPLAL++LGSFL GR+ DEW S L +L+  P   +  IL++SFDGL 
Sbjct: 379 AELCKSFVTYAGGLPLALKILGSFLKGRTPDEWNSALAKLQQTPDITVFKILKMSFDGLD 438

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLL 298
           E+EKKIFLDIACF     ++++   ++       I   VL EK L+T+  +N + +HDL+
Sbjct: 439 EMEKKIFLDIACFRWLYRKEFMIELVDSSDPCNRITRSVLAEKSLLTISSDNQVHVHDLI 498

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
            E+G +IV RQ  +E G RSRL   +++ HV T++TGTE +EGI+LD    E   +   +
Sbjct: 499 HEMGCEIV-RQENKEPGGRSRLCLRDDIFHVFTKNTGTEAIEGILLDLAELEEADW---N 554

Query: 359 AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
            +AFSKM  L+LL I NL+L  G   L N LR L W  YP K LP   Q D+  EI + +
Sbjct: 555 LEAFSKMCKLKLLYIHNLRLSVGPRLLPNSLRFLSWSWYPSKSLPPCFQPDELAEISLVH 614

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           S I  LW GIK+L  LK + LS+S NL R PDFTG PNLEKL+LEGCT L +IHPS+ L 
Sbjct: 615 SNIDHLWNGIKYLVNLKSIDLSYSINLTRTPDFTGIPNLEKLVLEGCTNLVKIHPSIALL 674

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
            +L I N+++C S+ +LP ++ M+ LE                  T DVSG  K +   E
Sbjct: 675 KRLRIWNLRNCKSIRSLPSEVNMEFLE------------------TFDVSGCSKLKMISE 716

Query: 539 IVEHMEHLSELHLEGTAIRGLPLSIELLS-GLVLLNLKN-----------------CRSL 580
            V  M+ LS+L+L GTA+  LP SIE LS  LV+L+L                     S 
Sbjct: 717 FVMQMKRLSKLYLGGTAVEKLPSSIEHLSESLVVLDLSGIVIREQPYSRLLKQNLIASSF 776

Query: 581 EILP-----------VTVSNLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIK 628
            + P            ++ +  CLR+LKL+ C+  + + P  + S+  L  L L G +  
Sbjct: 777 GLFPRKSPHPLIPLLASLKHFSCLRTLKLNDCNLCEGEIPNDIGSLSSLQRLELRGNNFV 836

Query: 629 EVPSSIELLTKLELLNLSDCKNLVRLP 655
            +P+SI L   LE +++ +CK L +LP
Sbjct: 837 SLPASIHL---LEDVDVENCKRLQQLP 860



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 161/530 (30%), Positives = 251/530 (47%), Gaps = 103/530 (19%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
            L+S+ LS    L + P+    + +L +L L+G T++ ++  SI LL +L + NL +CK++
Sbjct: 630  LKSIDLSYSINLTRTPDFT-GIPNLEKLVLEGCTNLVKIHPSIALLKRLRIWNLRNCKSI 688

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTS----- 703
              LPS +  ++ L+T ++SGC KL+ + E + Q++ L +L + GTAV   P S       
Sbjct: 689  RSLPSEV-NMEFLETFDVSGCSKLKMISEFVMQMKRLSKLYLGGTAVEKLPSSIEHLSES 747

Query: 704  ---------------WYSYIPINLMRKSVALK-----------LPSLSGLCSLRKLNLTD 737
                           +   +  NL+  S  L            L SL     LR L L D
Sbjct: 748  LVVLDLSGIVIREQPYSRLLKQNLIASSFGLFPRKSPHPLIPLLASLKHFSCLRTLKLND 807

Query: 738  CNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP- 796
            CNL EG +P+DIG+L SL+ L L  N+FVSLP SI HL  L ++++E+CKRLQ LP+LP 
Sbjct: 808  CNLCEGEIPNDIGSLSSLQRLELRGNNFVSLPASI-HL--LEDVDVENCKRLQQLPELPD 864

Query: 797  -PNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLA---FSMLREYLEA 852
             PN+ ++R N                     + C++ L ++GN+  +   +S+L+ ++E 
Sbjct: 865  LPNLCRLRAN-------------------FWLNCINCLSMVGNQDASYFLYSVLKRWIEI 905

Query: 853  VSNTR-------------QHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGY 899
             + +R             ++   V+PGSEIPEWF  Q+ G ++T   P +  N  K +G+
Sbjct: 906  EALSRCDMMIRQETHCSFEYFRFVIPGSEIPEWFNNQSVGDTVTEKLPWDACN-SKWIGF 964

Query: 900  AICC--VFHVLKNSRGNNCFGSYPTHQLNC---HIGHGIYGIGFRDKFGQAGSDHLWLLY 954
            A+C   V H   ++          T  + C     G  + G+G  +   Q  SDHL+LL 
Sbjct: 965  AVCALIVPHDNPSAVPEKSHLDPDTCCIWCFWNDYGIDVIGVG-TNNVKQIVSDHLYLLV 1023

Query: 955  LSRQTCYDIRLPLESNLEPFESNHV-NVSFEPWLGQGLEVKMCGLHPVYMDEVEELDQTT 1013
            L          P        E N V  ++      +G++VK CG+  +Y  + EEL    
Sbjct: 1024 LPS--------PFRKPENYLEVNFVFKIARAVGSNRGMKVKKCGVRALYEHDTEELISKM 1075

Query: 1014 NQPSRFTVYNLNEFDQHFVGSKMIVATTSKRSLTEYFGAEASGSGCCDDE 1063
            NQ S+ +  +L E         M+ AT           A  S SG  DDE
Sbjct: 1076 NQ-SKTSSISLYEEAMDEQEGAMVKATQE---------AATSRSGGSDDE 1115


>gi|296090597|emb|CBI40966.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 292/714 (40%), Positives = 414/714 (57%), Gaps = 63/714 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           + S+  ++  L+ + S+DVRM+GI GMGG+GKTT+A+ +Y+ +S +FE   +L++  E  
Sbjct: 189 IGSQIREMELLLCTESTDVRMVGIWGMGGIGKTTLAQAIYNQVSSQFEGCSYLEDAGEDL 248

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            K GL+ LQ +LLSQ+L   +  +    +G   L +RL  ++V +V+D+V D   L+ L 
Sbjct: 249 RKRGLIGLQEKLLSQILGHENIKL----NGPISLKARLCSREVFIVLDNVYDQDILECLV 304

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G+ +WFG GSRIIIT+RD+ LL +HGV  VY+   L + EA++     A K    + E +
Sbjct: 305 GSHDWFGQGSRIIITTRDKRLLMSHGVRVVYEVKKLVHTEAIEFLGRYASKQQIVIDEFM 364

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS  II YA GLPL L+VLGSFL   S  EWRS L++L+  P   I ++L+IS+DGL +
Sbjct: 365 ELSNSIITYAQGLPLVLKVLGSFLFSMSKHEWRSELDKLKDTPHGRIQEVLRISYDGLDD 424

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWMHDLLQ 299
            EK IFLDIACFFKG D+D+V   L+GCGF  V GIR LI+K LIT+ NN  + MHDLLQ
Sbjct: 425 KEKNIFLDIACFFKGEDKDHVIKILDGCGFFAVCGIRGLIDKSLITISNNDKIVMHDLLQ 484

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G++I+++ SP+E GKRSRLW  ++  HVL+++TGT+ VEGI   N     E++   + 
Sbjct: 485 EMGRKIIRQTSPKEPGKRSRLWIYKDAYHVLSKNTGTQEVEGIFF-NLSDIEEIHF--TT 541

Query: 360 KAFSKMTNLRLLKI----------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLP 403
           KAF+ M  LRLLK                 C + +P   ++  N LR L   GYPL+ LP
Sbjct: 542 KAFAGMDKLRLLKFYDYSPSTNSECTSKRKCKVHIPRDFKFHYNELRYLHLHGYPLEQLP 601

Query: 404 SNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
            +      +++ +  S + +LWKGIK LDKLK M LSHS+ L+  P+F+G  NLEKL L 
Sbjct: 602 HDFSPKNLVDLSLSCSDVKQLWKGIKVLDKLKFMDLSHSKYLVETPNFSGISNLEKLDLT 661

Query: 464 GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLS 523
           GCT L E+HP+L +  KL  L+++DC                   LK++P +I  LK L 
Sbjct: 662 GCTYLREVHPTLGVLGKLSFLSLRDCKM-----------------LKNIPNSICKLKSLE 704

Query: 524 TLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRS---- 579
           T   SG  K   FPE   ++E L EL+ + TAI  LP SI  L  L +L+   C+     
Sbjct: 705 TFIFSGCSKVENFPENFGNLEQLKELYADETAISALPSSICHLRILQVLSFNGCKGPPSA 764

Query: 580 --LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP--SSIE 635
             L +LP   SN        LSG   LK             EL L   +I E    S + 
Sbjct: 765 SWLTLLPRKSSNSGKFLLSPLSGLGSLK-------------ELNLRDCNISEGADLSHLA 811

Query: 636 LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLE 689
           +L+ LE L+LS   N + LPSS+  L  L +L L  C +L+ + E    I+ ++
Sbjct: 812 ILSSLEYLDLSG-NNFISLPSSMSQLSQLVSLKLQNCRRLQALSELPSSIKEID 864



 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 175/525 (33%), Positives = 256/525 (48%), Gaps = 79/525 (15%)

Query: 542  HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
            H   L  LHL G  +  LP        LV L+L +C  ++ L   +  L  L+ + LS  
Sbjct: 583  HYNELRYLHLHGYPLEQLPHDFSP-KNLVDLSL-SCSDVKQLWKGIKVLDKLKFMDLSHS 640

Query: 602  SKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
              L + P     + +L +L L G T ++EV  ++ +L KL  L+L DCK L  +P+SI  
Sbjct: 641  KYLVETPNF-SGISNLEKLDLTGCTYLREVHPTLGVLGKLSFLSLRDCKMLKNIPNSICK 699

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---------------------- 698
            LKSL+T   SGC K+EN PE  G +E L+EL    TA+                      
Sbjct: 700  LKSLETFIFSGCSKVENFPENFGNLEQLKELYADETAISALPSSICHLRILQVLSFNGCK 759

Query: 699  -PHSTSWYSYIPINLMRKSV---ALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCS 754
             P S SW + +P    RKS       L  LSGL SL++LNL DCN+ EGA  S +  L S
Sbjct: 760  GPPSASWLTLLP----RKSSNSGKFLLSPLSGLGSLKELNLRDCNISEGADLSHLAILSS 815

Query: 755  LKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLL 814
            L+ L LS N+F+SLP+S++ LS+L++++L++C+RLQ+L +LP +I+++  + C SL T+ 
Sbjct: 816  LEYLDLSGNNFISLPSSMSQLSQLVSLKLQNCRRLQALSELPSSIKEIDAHNCMSLETIS 875

Query: 815  D-ALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQ----------HLSVV 863
            + +L       +   CL       N       L  +L+    +R             S V
Sbjct: 876  NRSLFPSLRHVSFGECLKIKTYQNNIGSMLQALATFLQTHKRSRYARDNPESVTIEFSTV 935

Query: 864  VPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSY-PT 922
            VPGSEIP+WF YQ+ G+ + +  P N +N    +G+A+  VF       G +    Y P 
Sbjct: 936  VPGSEIPDWFSYQSSGNVVNIELPPNWFN-SNFLGFALSAVF-------GFDPLPDYNPN 987

Query: 923  HQ---LNCHIGHGIYGIGFRDKF-----GQA--GSDHLWLLYLSRQTCYDIRLPLESNLE 972
            H+   L C          +RD       G A   SDHLWL Y           P+ S+ +
Sbjct: 988  HKVFCLFCIFSFQNSAASYRDNVFHYNSGPALIESDHLWLGY----------APVVSSFK 1037

Query: 973  PFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEELDQTTNQPS 1017
              E NH   +F+ + G+   VK CG+H VY  E    D + N P+
Sbjct: 1038 WHEVNHFKAAFQIY-GRHFVVKRCGIHLVYSSE----DVSDNNPT 1077


>gi|399920205|gb|AFP55552.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1144

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 300/687 (43%), Positives = 419/687 (60%), Gaps = 54/687 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MDS+ E++  L+D  ++DVR IGI GMGG+GKTT+A +VY+ ISH+FE   FL NVRE+S
Sbjct: 199 MDSKLEEMDVLLDKEANDVRFIGIWGMGGIGKTTLAGLVYEKISHQFEVCIFLANVREVS 258

Query: 61  -SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            +  GLV LQ+Q+LSQ+LK  +  +WNV+ G +M+   +  K VLLV+DDV   +QL++ 
Sbjct: 259 KTTHGLVDLQKQILSQILKEENVQVWNVYSGRNMIKRCVCNKAVLLVLDDVDQSEQLENF 318

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G ++ FG  SRIIIT+RD  +L THGV++ Y+  G+N  EALQLF+ KAF+  +P ++ 
Sbjct: 319 VGEKDCFGLRSRIIITTRDRRVLVTHGVEKPYELKGINEHEALQLFSWKAFRKCEPEEDY 378

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            +L    + YAGGLPLAL++LGSFL GR+ DEW S L +L+  P   +  IL++SFDGL 
Sbjct: 379 AELCKSFVTYAGGLPLALKILGSFLKGRTPDEWNSALAKLQQTPDITVFKILKMSFDGLD 438

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT-LWMHDLL 298
           E+EKKIFLDIACF +    +++   ++       I  RVL EK L+T+ +++ + +HDL+
Sbjct: 439 EMEKKIFLDIACFRRLYSNEFMIELVDSSDPCNRITRRVLAEKSLLTISSDSQVHVHDLI 498

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
            E+G +IV RQ  EE G RSRL   +++ HV T++TGTE +EGI+LD    E   +   +
Sbjct: 499 HEMGCEIV-RQENEESGGRSRLCLRDDIFHVFTKNTGTEAIEGILLDLAELEEADW---N 554

Query: 359 AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
            +AFSKM  L+LL I NL+L  G + L N LR L W  YP K LP   Q ++  E+ + +
Sbjct: 555 LEAFSKMCKLKLLYIHNLRLSVGPKCLPNALRFLSWSWYPSKSLPPCFQPEELTELSLVH 614

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           S I  LW GIK+L KLK + LS+S NL R PDFTG  NLEKLILEGCT L +IHPS+ L 
Sbjct: 615 SNIDHLWNGIKYLGKLKSIDLSYSINLTRTPDFTGISNLEKLILEGCTNLVKIHPSIALL 674

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
            +L I N ++C S+  LP ++ M+ LE                  T DVSG  K +  PE
Sbjct: 675 KRLKIWNFRNCKSIKRLPSEVNMEFLE------------------TFDVSGCSKLKMIPE 716

Query: 539 IVEHMEHLSELHLEGTAIRGLPLSIEL---------LSGLVLLNLKNCR---------SL 580
            V  M+ LS+L L GTA+  LP SIE          LSG+V+      R         SL
Sbjct: 717 FVGQMKRLSKLRLGGTAVEKLPSSIERWSESLVELDLSGIVIREQPYSRFLKQNLIASSL 776

Query: 581 EILP-----------VTVSNLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIK 628
            + P            ++ +   L  LKL+ C+  +   P  + S+  L  L L G +  
Sbjct: 777 GLFPRKSPHPLIPLLASLKHFSSLTELKLNDCNLFEGDIPNDIGSLSSLRSLGLRGNNFV 836

Query: 629 EVPSSIELLTKLELLNLSDCKNLVRLP 655
            +P+SI LL+KLE +N+ +CK L +LP
Sbjct: 837 SLPASIHLLSKLEYINVENCKRLQQLP 863



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 175/537 (32%), Positives = 264/537 (49%), Gaps = 95/537 (17%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
            L+S+ LS    L + P+    + +L +L L+G T++ ++  SI LL +L++ N  +CK++
Sbjct: 630  LKSIDLSYSINLTRTPDFT-GISNLEKLILEGCTNLVKIHPSIALLKRLKIWNFRNCKSI 688

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYS-- 706
             RLPS +  ++ L+T ++SGC KL+ +PE +GQ++ L +L + GTAV   P S   +S  
Sbjct: 689  KRLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQMKRLSKLRLGGTAVEKLPSSIERWSES 747

Query: 707  ------------------YIPINLMRKSVALK-----------LPSLSGLCSLRKLNLTD 737
                              ++  NL+  S+ L            L SL    SL +L L D
Sbjct: 748  LVELDLSGIVIREQPYSRFLKQNLIASSLGLFPRKSPHPLIPLLASLKHFSSLTELKLND 807

Query: 738  CNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPP 797
            CNL EG +P+DIG+L SL+ L L  N+FVSLP SI  LSKL  I +E+CKRLQ LP+L  
Sbjct: 808  CNLFEGDIPNDIGSLSSLRSLGLRGNNFVSLPASIHLLSKLEYINVENCKRLQQLPELSA 867

Query: 798  NIRQVRVNGCASLVTLLDALKLCKSDSTM-IACLDSLKLLGNKSLA---FSMLREYLEAV 853
                 R + C +L    D   LC+  +   + C++ L ++ N+  +   +++L+ ++E  
Sbjct: 868  IGVLSRTDNCTALQLFPDPPDLCRITTNFSLNCVNCLSMVCNQDASYFLYAVLKRWIEIQ 927

Query: 854  SNTR---------------QHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVG 898
              +R               ++L VV+PGSEIPEWF  Q+ G S+T   PS+  N  K +G
Sbjct: 928  VLSRCDMTVHMQKTHRHPSEYLKVVIPGSEIPEWFNNQSVGDSVTEKFPSDACNYSKWIG 987

Query: 899  YAICCVFHVLKNSRGNNCFGSYP-----THQLNCHIGHGIYGI---GFRDKFGQAGSDHL 950
            +A+C +     N    +     P     T Q+ C+  + +      G  D   Q  SDHL
Sbjct: 988  FAVCALIVPQDNP---SAVPEVPHLDPDTCQILCYWSNFVTDTNLGGVGDYVKQFVSDHL 1044

Query: 951  WLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQG----LEVKMCGLHPVYMDEV 1006
            WLL L R     +R+P E+ LE      VN  FE     G    ++VK CG+  +Y  + 
Sbjct: 1045 WLLVLRRP----LRIP-ENCLE------VNFVFEIRRAVGNNRCMKVKKCGVRALYEHDR 1093

Query: 1007 EELDQTTNQPSRFTVYNLNEFDQHFVGSKMIVATTSKRSLTEYFGAEASGSGCCDDE 1063
            EEL    NQ    +  +L E         M+ AT              SGSG  DDE
Sbjct: 1094 EELISKMNQSKSSSSISLYEEAMDEQEGAMVKAT-------------PSGSGGSDDE 1137


>gi|332330343|gb|AEE43929.1| TIR-NBS-LRR resistance protein muRdr1E [Rosa multiflora]
          Length = 1143

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 297/671 (44%), Positives = 414/671 (61%), Gaps = 21/671 (3%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MDS+ E++  L+D  ++DVR IGI GMGG+GKTT+AR+VY  ISH+FE   FLDNVRE+S
Sbjct: 199 MDSKLEEIDVLLDKEANDVRFIGIWGMGGIGKTTLARLVYQKISHQFEVCIFLDNVREVS 258

Query: 61  -SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            +  GLV LQ+++LSQ+ K  +  + +V+ GI M+   +  K VLLV+DDV   +QL++L
Sbjct: 259 KTTHGLVDLQKKILSQIFKEENVQVLDVYSGITMIKRCVCNKAVLLVLDDVDQSEQLENL 318

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDE-VYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            G ++ FG  SRIIIT+RD H+L THGVD+  Y+  GLN DEALQLF  KAF+  +P + 
Sbjct: 319 VGGKDCFGLRSRIIITTRDRHVLVTHGVDQKPYELKGLNEDEALQLFCWKAFRNCKPEEY 378

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             +     + YA GLPLAL++LGSFL+GR+  EW S L +L+  P   + +IL+ISFDGL
Sbjct: 379 YAEPCKSFVTYAAGLPLALKILGSFLNGRTPGEWNSALAKLQQTPYRTVFEILKISFDGL 438

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDL 297
            E EKKIFLDIACF +    +++   ++       I   VL EK L+T+  +N + +HDL
Sbjct: 439 DETEKKIFLDIACFRRLYRNEFMIELVDSSDPCNCITRSVLAEKSLLTISSDNQVDVHDL 498

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           + E+G +IV RQ  EE G RSRL   +++ HV T++TGTE +EGI+L     E   +   
Sbjct: 499 IHEMGCEIV-RQENEEPGGRSRLCLRDDIFHVFTKNTGTEAIEGILLHLDKLEEADW--- 554

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
           + + FSKM  L+LL I NL+L  G ++L N LR L W  YP K LP   Q D+  E+ + 
Sbjct: 555 NLETFSKMCKLKLLYIHNLRLSVGPKFLPNALRFLSWSWYPSKSLPPCFQPDELTELSLV 614

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
           +S I  LW GIK+L  LK + LS+S NL R PDFTG PNLEKL+LEGCT L +IHPS+ L
Sbjct: 615 HSNIDHLWNGIKYLVNLKSIDLSYSINLRRTPDFTGIPNLEKLVLEGCTNLVKIHPSIAL 674

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGLKCLSTLDVSGDL 531
             +L I N ++C S+ +LP ++ M+ LE  +      LK +P        LS L + G  
Sbjct: 675 LKRLKIWNFRNCKSIKSLPSEVNMEFLETFDVSGCSKLKKIPEFEGQTNRLSNLSLGGT- 733

Query: 532 KFREFPEIVEHM-EHLSELHLEGTAIRGLPLSIELLSGLV-----LLNLKNCRSLEILPV 585
              + P  +EH+ E L EL L G  IR  P S+ L   L+     L   K+   L  L  
Sbjct: 734 AVEKLPSSIEHLSESLVELDLSGIVIREQPYSLFLKQNLIVSSFGLFPRKSPHPLIPLLA 793

Query: 586 TVSNLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLN 644
            + +  CLR+LKL+ C+  + + P  + S+  L  L L G +   +P+SI LL+KL   N
Sbjct: 794 PLKHFSCLRTLKLNDCNLCEGEIPNDIGSLSSLRRLELGGNNFVSLPASIYLLSKLTNFN 853

Query: 645 LSDCKNLVRLP 655
           + +CK L +LP
Sbjct: 854 VDNCKRLQQLP 864



 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 170/526 (32%), Positives = 260/526 (49%), Gaps = 82/526 (15%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
            L+S+ LS    L++ P+    + +L +L L+G T++ ++  SI LL +L++ N  +CK++
Sbjct: 631  LKSIDLSYSINLRRTPDFT-GIPNLEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNCKSI 689

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYS-- 706
              LPS +  ++ L+T ++SGC KL+ +PE  GQ   L  L + GTAV   P S    S  
Sbjct: 690  KSLPSEV-NMEFLETFDVSGCSKLKKIPEFEGQTNRLSNLSLGGTAVEKLPSSIEHLSES 748

Query: 707  ------------------YIPINLM--------RKSVALKLPSLSGL---CSLRKLNLTD 737
                              ++  NL+        RKS    +P L+ L     LR L L D
Sbjct: 749  LVELDLSGIVIREQPYSLFLKQNLIVSSFGLFPRKSPHPLIPLLAPLKHFSCLRTLKLND 808

Query: 738  CNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPP 797
            CNL EG +P+DIG+L SL+ L L  N+FVSLP SI  LSKL N  +++CKRLQ LP+L  
Sbjct: 809  CNLCEGEIPNDIGSLSSLRRLELGGNNFVSLPASIYLLSKLTNFNVDNCKRLQQLPELSA 868

Query: 798  NIRQVRVNGCASLVTLLDALKLCK-SDSTMIACLDSLKLLGNKSLA---FSMLREYLEAV 853
                 R + C  L    D   LC+ + +  + C++ L ++GN+  +   +S+L+ ++E +
Sbjct: 869  KDVLPRSDNCTYLQLFPDPPDLCRITTNFWLNCVNCLSMVGNQDASYFLYSVLKRWIEVL 928

Query: 854  SNTR-------------QHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYA 900
            S                + L +V+PGSEIPEWF  Q+ G  +T   PS+  N  K +G+A
Sbjct: 929  SRCDMMVHMQETHRRPLKSLELVIPGSEIPEWFNNQSVGDRVTEKLPSDECN-SKCIGFA 987

Query: 901  ICCVFHVLKNSRG--NNCFGSYPTHQLNC---HIGHGIYGIGFRDKFGQAGSDHLWLLYL 955
            +C +     N      +      T ++ C   + G G++G+G   K  Q  SDHL LL L
Sbjct: 988  VCALIVPPDNPSAVPEDPHIDPDTCRIWCRWNNYGIGLHGVGVSVK--QFVSDHLCLLVL 1045

Query: 956  SRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQG----LEVKMCGLHPVYMDEVEELDQ 1011
                       L    +P     VN  FE     G    ++VK CG+  +Y  + EEL  
Sbjct: 1046 -----------LSPFRKPENCLEVNFVFEITRAVGYNVCMKVKKCGVRALYEHDTEELIS 1094

Query: 1012 TTNQ--PSRFTVY--NLNEFDQHFVGSKMIVATT-SKRSLTEYFGA 1052
              NQ   S  ++Y   ++E +   V +K   AT+ S  S  EY+ A
Sbjct: 1095 KMNQSKSSSISLYEEGMDEQEGVMVKAKQEAATSGSGGSDDEYYSA 1140


>gi|37574597|gb|AAQ93075.1| TIR-NBS-LRR type R protein 7 [Malus baccata]
          Length = 1095

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 285/702 (40%), Positives = 419/702 (59%), Gaps = 39/702 (5%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++SR + +   + SG S+V M+GI GMGGLGKTT A+ +Y+ I HEF+   FL +V   +
Sbjct: 216 INSRIQDIISRLSSGGSNVIMVGIWGMGGLGKTTAAKAIYNQIHHEFQFKSFLPDVGNAA 275

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           SK GLV LQ++L+  +LK   + I +V +GI ++  + + ++VL+++D++ +V QL ++ 
Sbjct: 276 SKHGLVYLQKELIYDILK-TKSKISSVDEGIGLIEDQFRHRRVLVIMDNIDEVGQLDAIV 334

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           GN +WFG GSRIIIT+RDEHLLK   VD+ Y    L+  EAL+LF+  AF    P +E +
Sbjct: 335 GNPDWFGPGSRIIITTRDEHLLKQ--VDKTYVAQKLDEREALELFSWHAFGNNWPNEEYL 392

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS +++ Y GGLPLALEVLGSFL  R + EW+S LE+L+  P  +I+  L+ISF+GL +
Sbjct: 393 ELSEKVVSYCGGLPLALEVLGSFLFKRPIAEWKSQLEKLKRTPEGKIIKSLRISFEGLDD 452

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            +K IFLDI+CFF G D+DYV   L+GCGF+  IGI VL E+CL+TV +N L MHDLL+E
Sbjct: 453 AQKAIFLDISCFFIGEDKDYVAKVLDGCGFYATIGISVLRERCLVTVEHNKLNMHDLLRE 512

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD-NYHHENEVYLCASA 359
           + + I+  +SP + GK SRLW + EV +VLT  +GTE VEG+ L   Y H+       S 
Sbjct: 513 MAKVIISEKSPGDPGKWSRLWDKREVINVLTNKSGTEEVEGLALPWGYRHDT----AFST 568

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSN-LQMDKTIEIYMCY 418
           +AF+ +  LRLL++C ++L    ++L   L  L W   PLK +P +    DK + + M +
Sbjct: 569 EAFANLKKLRLLQLCRVELNGEYKHLPKELIWLHWFECPLKSIPDDFFNQDKLVVLEMQW 628

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           S++ ++W+G K L  LK + LS S +L + PDF+  PNLE+LIL  C  L EIHPS+   
Sbjct: 629 SKLVQVWEGSKSLHNLKTLDLSESRSLQKSPDFSQVPNLEELILYNCKELSEIHPSIGHL 688

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
            +L ++N++ C  LI+LPG                      K +  L ++G L  RE  E
Sbjct: 689 KRLSLVNLEWCDKLISLPGDFYKS-----------------KSVEALLLNGCLILRELHE 731

Query: 539 IVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKL 598
            +  M  L  L  E T IR +P SI  L  L  L+L +  S+  LP ++  L  LR L L
Sbjct: 732 DIGEMISLRTLEAEYTDIREVPPSIVRLKNLTRLSLSSVESIH-LPHSLHGLNSLRELNL 790

Query: 599 SGCS-KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL---VRL 654
           S       + P+ + S+  L +L L       +P S+  L+KLE L L  C+ L     L
Sbjct: 791 SSFELADDEIPKDLGSLISLQDLNLQRNDFHTLP-SLSGLSKLETLRLHHCEQLRTITDL 849

Query: 655 PSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
           P+      +LK L  +GC  LE +P    ++ ++ EL +S +
Sbjct: 850 PT------NLKFLLANGCPALETMP-NFSEMSNIRELKVSDS 884



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 200/420 (47%), Gaps = 54/420 (12%)

Query: 549 LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
           LH     ++ +P        LV+L ++  + +++   + S L  L++L LS    L+K P
Sbjct: 601 LHWFECPLKSIPDDFFNQDKLVVLEMQWSKLVQVWEGSKS-LHNLKTLDLSESRSLQKSP 659

Query: 609 EIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL 667
           +  + + +L EL L +   + E+  SI  L +L L+NL  C  L+ LP      KS++ L
Sbjct: 660 DFSQ-VPNLEELILYNCKELSEIHPSIGHLKRLSLVNLEWCDKLISLPGDFYKSKSVEAL 718

Query: 668 NLSGCFKLENVPETLGQIESLEELDISGT---AVPHSTSWYSYIPINLMRKSVA----LK 720
            L+GC  L  + E +G++ SL  L+   T    VP S         NL R S++    + 
Sbjct: 719 LLNGCLILRELHEDIGEMISLRTLEAEYTDIREVPPSIVRLK----NLTRLSLSSVESIH 774

Query: 721 LP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLL 779
           LP SL GL SLR+LNL+   L +  +P D+G+L SL++L L +N F +LP S++ LSKL 
Sbjct: 775 LPHSLHGLNSLRELNLSSFELADDEIPKDLGSLISLQDLNLQRNDFHTLP-SLSGLSKLE 833

Query: 780 NIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL--------LDALKLCKSDSTMIACLD 831
            + L  C++L+++  LP N++ +  NGC +L T+        +  LK+  S + +   L 
Sbjct: 834 TLRLHHCEQLRTITDLPTNLKFLLANGCPALETMPNFSEMSNIRELKVSDSPNNLSTHLR 893

Query: 832 SLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLY 891
              L G  S  F                  + +  + +P+WF + NEG+ +T   P +  
Sbjct: 894 KNILQGWTSCGFG----------------GIFLHANYVPDWFEFVNEGTKVTFDIPPS-- 935

Query: 892 NKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLW 951
           + +   G  + C++H            SY + QL   + +       R   G    DHL+
Sbjct: 936 DGRNFEGLTLFCMYH------------SYRSRQLAIIVINNTQRTELRAYIGTDEDDHLY 983


>gi|356515118|ref|XP_003526248.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1010

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 281/648 (43%), Positives = 394/648 (60%), Gaps = 34/648 (5%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
           VR++GICGMGG+GKTT+A V+YD ISH+F+A  F+DNV +     G + + +QLL Q L 
Sbjct: 219 VRIVGICGMGGIGKTTLATVLYDRISHQFDAHCFIDNVSKTYRHCGQIGVLKQLLHQTLN 278

Query: 79  LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
             D  I N++   +++ SRL+  K ++V+D+V +V+QL+ L  NREW G+GSRIII SRD
Sbjct: 279 -EDLQICNLYHAANLMQSRLRYVKSIIVLDNVNEVEQLEKLVLNREWLGAGSRIIIISRD 337

Query: 139 EHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALE 198
           +H+LK  GV  VYK   LN   +L+LF  KAF +     +  +L   +++YA  LPLA++
Sbjct: 338 KHVLKKCGVTVVYKVQLLNGANSLKLFCKKAFDSVDITGDYEELKYEVLKYANDLPLAIK 397

Query: 199 VLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDR 258
           VLGS LSGRSV  WRS L+RL+  P  +ILD+L+IS+D LQ+LEK+IFLDIACFF GN+ 
Sbjct: 398 VLGSVLSGRSVSYWRSYLDRLKENPNKDILDVLRISYDELQDLEKEIFLDIACFFCGNEE 457

Query: 259 DYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRS 318
            YV   L+ CGFH  IGIR L++K LI   +  + MH+LL+ LG+ IV+  +P+E GK S
Sbjct: 458 LYVKKVLDCCGFHSEIGIRALVDKSLIDNSSGFIEMHNLLKVLGRTIVKGNAPKEPGKWS 517

Query: 319 RLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQ- 377
           R+W  E+  + ++++T T   E IVLD    E E+ L A A+A SKM+NLRLL   +++ 
Sbjct: 518 RVWLHEDF-YNMSKATETTNNEAIVLD---REMEI-LMADAEALSKMSNLRLLIFRDVKF 572

Query: 378 --LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLK 435
             + N +  LSN+L+ L W  YP  +LPS+ Q +  +E+ + +S I +LWKGIKHL  L+
Sbjct: 573 MGILNSVNCLSNKLQFLEWYNYPFSYLPSSFQPNLLVELILQHSNIKQLWKGIKHLPNLR 632

Query: 436 VMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITL 495
            + LS+S+NLI  PDF G  NLE +ILEGCT L  IHPS+ L  KL  LN+K+C SL++L
Sbjct: 633 ALDLSYSKNLIEAPDFGGVLNLEWIILEGCTNLARIHPSVGLLRKLAFLNLKNCISLVSL 692

Query: 496 PGKIL-MKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT 554
           P  IL + SL  LN+   P   S                 +  E   H EH     +  T
Sbjct: 693 PSNILSLSSLGYLNISGCPKVFSN----------------QLLEKPIHEEHSKMPDIRQT 736

Query: 555 AIRGLPLSIELLSGLVLLNLKNC-------RSLEILPVTVSNLKCLRSLKLSGCSKLKKF 607
           A++    S  +   L+ L  ++         S   L  ++    C+R L LS C+ L + 
Sbjct: 737 AMQFQSTSSSIFKRLINLTFRSSYYSRGYRNSAGCLLPSLPTFFCMRDLDLSFCN-LSQI 795

Query: 608 PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           P+ + SM  L  L L G +   +P SI  L+KL  LNL  CK L   P
Sbjct: 796 PDAIGSMHSLETLNLGGNNFVSLPYSINQLSKLVHLNLEHCKQLRYFP 843



 Score =  133 bits (334), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 175/339 (51%), Gaps = 33/339 (9%)

Query: 587 VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNL 645
           + +L  LR+L LS    L + P+    + +L  + L+G T++  +  S+ LL KL  LNL
Sbjct: 625 IKHLPNLRALDLSYSKNLIEAPDF-GGVLNLEWIILEGCTNLARIHPSVGLLRKLAFLNL 683

Query: 646 SDCKNLVRLPSSIIALKSLKTLNLSGCFKL--ENVPETLGQIESLEELDISGTAVPHSTS 703
            +C +LV LPS+I++L SL  LN+SGC K+    + E     E  +  DI  TA+   ++
Sbjct: 684 KNCISLVSLPSNILSLSSLGYLNISGCPKVFSNQLLEKPIHEEHSKMPDIRQTAMQFQST 743

Query: 704 WYSYIP--INLM----------RKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGN 751
             S     INL           R S    LPSL     +R L+L+ CNL +  +P  IG+
Sbjct: 744 SSSIFKRLINLTFRSSYYSRGYRNSAGCLLPSLPTFFCMRDLDLSFCNLSQ--IPDAIGS 801

Query: 752 LCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLV 811
           + SL+ L L  N+FVSLP SI  LSKL+++ LE CK+L+  P++P            SL 
Sbjct: 802 MHSLETLNLGGNNFVSLPYSINQLSKLVHLNLEHCKQLRYFPEMP---------SPTSLP 852

Query: 812 TLLDALKLCKSDSTMIA--CLDSLKLLGNKSLAFSMLREYLEAV--SNTR-QHLSVVVPG 866
            + +          +    C   + +     + F+ + + L+    S+TR   + +VVPG
Sbjct: 853 VIRETYNFAHYPRGLFIFNCPKIVDIARCWGMTFAWMIQILQVSQESDTRIGWIDIVVPG 912

Query: 867 SEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
           ++IP+WF  Q+ G+SI++  PS + +    +G A C VF
Sbjct: 913 NQIPKWFNNQSVGTSISLD-PSPIMHGNHWIGIACCVVF 950


>gi|255564976|ref|XP_002523481.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223537309|gb|EEF38940.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 944

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 273/592 (46%), Positives = 379/592 (64%), Gaps = 41/592 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++SR +K+  L+    +DVR +G+ GMGG GKTT A VV++ IS +F++  FL NV E S
Sbjct: 195 INSRIDKIELLLCVELADVRFLGLWGMGGAGKTTTAEVVFNRISTQFDSCCFLANVNEES 254

Query: 61  SKGGLVSLQRQLLSQLLKLAD-NSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            + GL+ LQRQL S+LL   + N    +FD      SRL+ +KVL+V+DDV +++QL++L
Sbjct: 255 ERYGLLKLQRQLFSKLLGQDNVNYAEGIFDK-----SRLKHRKVLIVLDDVNNLRQLENL 309

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG   WFG GSRII+TSRD+ +LK +  D +YK   L++ EALQLF++ AF+   P  + 
Sbjct: 310 AGEHNWFGPGSRIILTSRDKDVLK-NKTDAIYKIEDLDHHEALQLFSLNAFRQECPKADY 368

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           ++LS R+I YA G PL L+VLGSFL  R++ EW S L +LE     EI ++L++S+DGL 
Sbjct: 369 MKLSKRVINYAKGNPLGLKVLGSFLYQRNIKEWESALHKLERSTNKEIQNVLKVSYDGLD 428

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           + EK IFLD+ACFF G DRD+VT  L GCGF   I I VL+ K L+T+ NNTL +H+LLQ
Sbjct: 429 DEEKDIFLDVACFFNGEDRDFVTRILNGCGFSADIAISVLVSKSLLTISNNTLAIHNLLQ 488

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           ++G  IV+++S +E G+RSRL   E+V HVL+++TGTE +EGI LD      +VYL  S 
Sbjct: 489 QMGWGIVRQESTKEPGRRSRLCTSEDVVHVLSKNTGTEAIEGIYLD-MSKSRKVYL--SP 545

Query: 360 KAFSKMTNLRLLKI----------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMD 409
           KAF +M NLRLLK             + LP GLE L ++L  L W GYPLK LP N   +
Sbjct: 546 KAFERMHNLRLLKFHHSFSPIAMYSKVYLPEGLESLPDKLSCLHWNGYPLKSLPFNFCAE 605

Query: 410 KTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLY 469
             +E+ M +S +  LW+G + L KL  + LS S++LIR+PDF+ A NLE + LEGC  L 
Sbjct: 606 YLVELSMPHSHVKFLWEGDQCLKKLNSINLSDSQHLIRLPDFSEALNLEYINLEGCISLA 665

Query: 470 EIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG 529
           ++  S+    KL ILN+KDC  L ++P  I ++SL KLNL       SG   L+      
Sbjct: 666 QVPSSIGYLTKLDILNLKDCKELRSIPSLIDLQSLRKLNL-------SGCSNLNHC---- 714

Query: 530 DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
               ++FP  +E      EL L+GTAI  LP SIE LS L   +++NC+ L+
Sbjct: 715 ----QDFPRNIE------ELCLDGTAIEELPASIEDLSELTFWSMENCKRLD 756



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 171/405 (42%), Gaps = 84/405 (20%)

Query: 617  LSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
            L EL +  + +K +    + L KL  +NLSD ++L+RLP    AL +L+ +NL GC  L 
Sbjct: 607  LVELSMPHSHVKFLWEGDQCLKKLNSINLSDSQHLIRLPDFSEAL-NLEYINLEGCISLA 665

Query: 677  NVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLT 736
             VP ++G    L +LDI                +NL        +PSL  L SLRKLNL+
Sbjct: 666  QVPSSIGY---LTKLDI----------------LNLKDCKELRSIPSLIDLQSLRKLNLS 706

Query: 737  DCNLMEGA--LPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ 794
             C+ +      P +I  LC      L   +   LP SI  LS+L    +E+CKRL     
Sbjct: 707  GCSNLNHCQDFPRNIEELC------LDGTAIEELPASIEDLSELTFWSMENCKRLDQ--- 757

Query: 795  LPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVS 854
                      N C  +    DA K  +  +T  A + SL      S++F           
Sbjct: 758  ----------NSCCLIAA--DAHKTIQRTATA-AGIHSL-----PSVSFGF--------- 790

Query: 855  NTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLY-NKKKLVGYAICCVFHVLKNSRG 913
                      PG+EIP+W +Y+  GSSITV    N + N  + +G+A+CCV         
Sbjct: 791  ----------PGTEIPDWLLYKETGSSITVKLHPNWHRNPSRFLGFAVCCVVKFTHFIDI 840

Query: 914  NN----CFGSYPT-----HQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIR 964
            NN    C  ++ T     H +NC +     G   +D+     S H+++ Y        ++
Sbjct: 841  NNIYVICECNFKTNHDDHHVVNCFLQGLNNG---KDESDLVKSQHVYIGYDFGIYLRAVK 897

Query: 965  LPLESNLEPFESNHVNVSFEPWLGQGL---EVKMCGLHPVYMDEV 1006
                  L  +E        +  +G  +   +V  CG+H +Y  + 
Sbjct: 898  GTYPGRLYHYEEVTFKFYAKKMVGHTVAWRKVDKCGVHLLYAQDA 942



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 102/184 (55%), Gaps = 17/184 (9%)

Query: 519 LKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNC 577
           LK L+++++S        P+  E + +L  ++LEG  ++  +P SI  L+ L +LNLK+C
Sbjct: 627 LKKLNSINLSDSQHLIRLPDFSEAL-NLEYINLEGCISLAQVPSSIGYLTKLDILNLKDC 685

Query: 578 RSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELL 637
           + L  +P  + +L+ LR L LSGCS L    +  R+++   EL LDGT+I+E+P+SIE L
Sbjct: 686 KELRSIPSLI-DLQSLRKLNLSGCSNLNHCQDFPRNIE---ELCLDGTAIEELPASIEDL 741

Query: 638 TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS--G 695
           ++L   ++ +CK L +    +IA  + KT+  +          T   I SL  +     G
Sbjct: 742 SELTFWSMENCKRLDQNSCCLIAADAHKTIQRTA---------TAAGIHSLPSVSFGFPG 792

Query: 696 TAVP 699
           T +P
Sbjct: 793 TEIP 796


>gi|105922450|gb|ABF81417.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1867

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 266/532 (50%), Positives = 352/532 (66%), Gaps = 10/532 (1%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-I 59
            +DSR E L   +   + +   IGICGMGG+GKTT+ARV+YD I   FE S FL NVRE  
Sbjct: 1016 IDSRLEVLNGYIGEETGEAIFIGICGMGGIGKTTVARVLYDRIRRRFEGSCFLANVREAF 1075

Query: 60   SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            + K G  SLQ++LLS +L   D +I +   GI+M+  +LQR K+L+V+DDV D KQL+ L
Sbjct: 1076 AEKDGPRSLQKKLLSDILMERDINICDSSTGIEMIKQKLQRIKILVVLDDVNDRKQLEYL 1135

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            A    WFG GSRIIITSRD ++L  +   ++Y+   LN D+AL LF+ KAFK  QP +  
Sbjct: 1136 AKEPGWFGPGSRIIITSRDTNVLIGNDDTKIYEAEKLNDDDALMLFSQKAFKNDQPAEGF 1195

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            V+LS +++ YA GLPLALEV+GSFL  RS+ EWR  + R+   P  +I+D+L++SFDGL 
Sbjct: 1196 VELSKQVVDYANGLPLALEVIGSFLYERSIPEWRGAINRMNEIPDCKIIDVLRVSFDGLH 1255

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
            E +KKIFLDIACF KG  +D +T  LE  GFH  IGI VLIE+ LI+V  + +WMHDLLQ
Sbjct: 1256 ESDKKIFLDIACFLKGFKKDRITRILESRGFHAGIGIPVLIERSLISVSRDQVWMHDLLQ 1315

Query: 300  ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
             +G++IV+ +SPEE G+RSRLW  E+VC  L ++TG E +E I LD    +   +   + 
Sbjct: 1316 IMGKEIVRCESPEEPGRRSRLWTYEDVCLALMDNTGKEKIEAIFLDMPGIKEAQW---NM 1372

Query: 360  KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
            KAFSKM+ LRLLKI NLQL  G E LSN+LR L W  YP K LP+ LQ+D+ +E++M  S
Sbjct: 1373 KAFSKMSRLRLLKINNLQLSKGPEDLSNQLRFLEWHSYPSKSLPAGLQVDELVELHMANS 1432

Query: 420  RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
             I +LW G K    LK++ LS+S NL R PD TG PNLE LILEGCT L ++HPSL  H 
Sbjct: 1433 SIEQLWYGYKSAVNLKIINLSNSLNLSRTPDLTGIPNLESLILEGCTSLSKVHPSLGSHK 1492

Query: 480  KLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGLKCLSTL 525
             L  +N+ +C S+  LP  + M+SL+         L+  P  +  + CL  L
Sbjct: 1493 NLQYVNLVNCESIRILPSNLEMESLKVFTLDGCSKLEKFPDVLGNMNCLMVL 1544



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 113/260 (43%), Gaps = 47/260 (18%)

Query: 526  DVSGDLKFREFPEIVE-------HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCR 578
            D+S  L+F E+             ++ L ELH+  ++I  L    +    L ++NL N  
Sbjct: 1397 DLSNQLRFLEWHSYPSKSLPAGLQVDELVELHMANSSIEQLWYGYKSAVNLKIINLSNSL 1456

Query: 579  SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLT 638
            +L   P  ++ +  L SL L GC+ L K    + S K+L                     
Sbjct: 1457 NLSRTP-DLTGIPNLESLILEGCTSLSKVHPSLGSHKNL--------------------- 1494

Query: 639  KLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
              + +NL +C+++  LPS++  ++SLK   L GC KLE  P+ LG +  L  L +  T +
Sbjct: 1495 --QYVNLVNCESIRILPSNL-EMESLKVFTLDGCSKLEKFPDVLGNMNCLMVLCLDETEL 1551

Query: 699  PHSTSW----YSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCS 754
                 W    +S I ++       +K+ +  G+C L  L +T       + PS    + +
Sbjct: 1552 KE---WQHGSFSNIELSFHSSQPRVKVKNC-GVCLLSSLYIT-------SQPSSAHFIVT 1600

Query: 755  LKELYLSKNSFVSLPTSITH 774
             KE   S  + ++L +S  H
Sbjct: 1601 SKETASSYKASLTLSSSYHH 1620



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 3/109 (2%)

Query: 522  LSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSL 580
            L  +++S  L     P++   + +L  L LEG T++  +  S+     L  +NL NC S+
Sbjct: 1447 LKIINLSNSLNLSRTPDLT-GIPNLESLILEGCTSLSKVHPSLGSHKNLQYVNLVNCESI 1505

Query: 581  EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKE 629
             ILP  +  ++ L+   L GCSKL+KFP+++ +M  L  L LD T +KE
Sbjct: 1506 RILPSNL-EMESLKVFTLDGCSKLEKFPDVLGNMNCLMVLCLDETELKE 1553


>gi|342365839|gb|AEL30372.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1061

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 289/700 (41%), Positives = 414/700 (59%), Gaps = 33/700 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M SR E +  LM  G SDVR  GI GMGG+GKTTIAR +Y+ I  +F+ S FL N+R+  
Sbjct: 199 MASRVEDVTTLMCIGLSDVRFTGIWGMGGVGKTTIARAIYEAIEDQFQISCFLANIRDTC 258

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
              G++ LQ+ +L + + ++  +  N++DG+ ++ + L  KKVL+V+DDV DV QL++LA
Sbjct: 259 ETNGILQLQK-ILGEHIHVSRCTFSNLYDGMRIIRNSLCNKKVLIVLDDVNDVSQLENLA 317

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           GN++WFG GSR++IT+RD HLLKTH V + Y+   L+  EAL+ F  KAFK   P +  +
Sbjct: 318 GNQDWFGPGSRVMITTRDMHLLKTHEVCDTYEVECLDKTEALRFFCSKAFKRDVPEEGYL 377

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           ++S  +++Y GGLPLAL+VLGS+L GR++  WRS +++L     ++IL+ L+IS+DGL  
Sbjct: 378 EMSHEVVKYTGGLPLALKVLGSYLYGRNISAWRSAVKKLRSVSDAKILETLRISYDGLDS 437

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN---------NT 291
           ++K+IFLDIACFFKG  +D V +  E  G++P I I VLIE+ L+TV           + 
Sbjct: 438 MQKEIFLDIACFFKGKPKDKVLDLFEKRGYNPQIDIDVLIERSLVTVKQDIDVFKKKFDV 497

Query: 292 LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
           L MHDLLQE+G+  V ++SP    KRSRLW  E++  +LT++ GTE ++ IVL    +  
Sbjct: 498 LEMHDLLQEMGRNFVIQESPNYPSKRSRLWSPEDLDLMLTQNKGTETIQSIVLPPIGNGT 557

Query: 352 EVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
                   KAF  M+ L+ L    ++    +  + + L++L W   PL+ LP   Q  + 
Sbjct: 558 YYVESWRDKAFPNMSQLKFLNFDFVRAHIHIN-IPSTLKVLHWELCPLETLPLVDQRYEL 616

Query: 412 IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
           +EI + +S I +LW G K L+KLK + LS S  L + PD +G P LE L L  C  L  I
Sbjct: 617 VEIKISWSNIVQLWHGFKFLEKLKHLDLSCS-GLEQTPDLSGVPVLETLDLSCCHCLTLI 675

Query: 472 HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDL 531
           HPSL+ H  L++LN+ +CTSL T PGK+ M SL++LNL           C S        
Sbjct: 676 HPSLICHKSLLVLNLWECTSLETFPGKLEMSSLKELNL---------CDCKS-------- 718

Query: 532 KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
            F   PE  E M  LS L  +  AI  LP+S+  L GL  L+L+ C+ L  LP ++  L+
Sbjct: 719 -FMSPPEFGECMTKLSRLSFQDMAISELPISLGCLVGLSELDLRGCKKLTCLPDSIHELE 777

Query: 592 CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKE--VPSSIELLTKLELLNLSDCK 649
            LR L+ S CS L   P  V  +  LS L L    + E   P        L  L+LS   
Sbjct: 778 SLRILRASSCSSLCDLPHSVSVIPFLSILDLRDCCLTEESFPCDFGQFPSLTDLDLSG-N 836

Query: 650 NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLE 689
           + V LP SI  L  LK L+L+GC +L+++PE    I  L+
Sbjct: 837 HFVNLPISIHELPKLKCLSLNGCKRLQSLPELPSSIRELK 876



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 191/453 (42%), Gaps = 87/453 (19%)

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSI 627
             L++LNL  C SLE  P  +  +  L+ L L  C      PE    M  LS L     +I
Sbjct: 684  SLLVLNLWECTSLETFPGKL-EMSSLKELNLCDCKSFMSPPEFGECMTKLSRLSFQDMAI 742

Query: 628  KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
             E+P S+  L  L  L+L  CK L  LP SI  L+SL+ L  S C  L            
Sbjct: 743  SELPISLGCLVGLSELDLRGCKKLTCLPDSIHELESLRILRASSCSSL------------ 790

Query: 688  LEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPS 747
                      +PHS S   ++ I                      L+L DC L E + P 
Sbjct: 791  --------CDLPHSVSVIPFLSI----------------------LDLRDCCLTEESFPC 820

Query: 748  DIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGC 807
            D G   SL +L LS N FV+LP SI  L KL  + L  CKRLQSLP+LP +IR+++   C
Sbjct: 821  DFGQFPSLTDLDLSGNHFVNLPISIHELPKLKCLSLNGCKRLQSLPELPSSIRELKAWCC 880

Query: 808  ASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGS 867
             SL T                     +   N S A S+   +        + L +V+PG+
Sbjct: 881  DSLDT---------------------RSFNNLSKACSV---FASTSQGPGEVLQMVIPGT 916

Query: 868  EIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNC 927
             IP WF+++ E + + V  P + +  ++L G A+C  F V  + R       + +  L  
Sbjct: 917  NIPSWFVHRQESNCLLVPFPHHCHPSERL-GIALC--FLVRPSER-------WFSLSLRL 966

Query: 928  HIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLE-PFESNHVNVSFEPW 986
             +G+G   I            HL +  ++     D       + E  FE   +NV + P 
Sbjct: 967  AVGNGDRVITNSIPIWYHQGYHLCMFCMTNDCLIDQETRKAIHFELSFED--INVEYPP- 1023

Query: 987  LGQGLEVKMCGLHPVYMDEVEELDQ-TTNQPSR 1018
              + L    C +H    DE+E L++  T +P++
Sbjct: 1024 --EILSSAACWVH---TDEIEHLNKGETERPNK 1051


>gi|225460149|ref|XP_002276056.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1131

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 370/1058 (34%), Positives = 529/1058 (50%), Gaps = 226/1058 (21%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MD   EKL+ LM+   ++VR++GI G+GG+GKTTIA+ +Y+ IS++F+ S FL+NVRE  
Sbjct: 198  MDFHLEKLKSLMNIELNEVRVVGIYGIGGIGKTTIAKAIYNDISYQFDGSSFLNNVRE-R 256

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            SK   + LQ++LL  +LK     + N+ +GI M+   L  K+VL+V DDV D+ Q+++LA
Sbjct: 257  SKDNALQLQQELLHGILKGKSPKVSNMDEGIQMIKRSLSSKRVLVVFDDVDDLMQIENLA 316

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
                WFG  SRIIIT+R +H L  +GV E Y+   L+  EA++LF+  AFK   P +   
Sbjct: 317  EEHSWFGPRSRIIITTRHKHFLTQYGVKESYEVPILHDAEAIELFSWWAFKQNLPNEIYK 376

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
             LS +++ YA GLPLALEVLGSFL  +++ EW S L +L+  P   I ++L+IS+DGL +
Sbjct: 377  NLSYQVVDYAKGLPLALEVLGSFLFKKTISEWESALCKLKTIPHMGIQNVLKISYDGLDD 436

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            +EK IFLDIACFFKG D+D+V+  L+   F+   GI VL +KCLI++  N L MHDLLQ+
Sbjct: 437  VEKGIFLDIACFFKGKDKDFVSRMLDE-DFYAESGIGVLHDKCLISISGNKLDMHDLLQQ 495

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G +IV+++ P+E G+RSRLW++E++  VL  + G+E +EGI LD  H E+   L  + +
Sbjct: 496  MGWEIVRQECPKEPGRRSRLWEQEDIFDVLKRNMGSEKIEGIFLDLSHLED--ILDFTTE 553

Query: 361  AFSKMTNLRLLKI---------------------CNLQLPNGLEYLSNRLRLLGWRGYPL 399
            AF+ M  LRLLK+                     C ++  +  ++ S+ LR L W GY L
Sbjct: 554  AFAGMKKLRLLKVYNSKSILGDFGDTFTFNNKVNCRVRFAHEFKFCSDDLRYLYWHGYSL 613

Query: 400  KFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEK 459
            K LP +      +++ M YS I +LWKGIK L  LK M LSHS+ LI  PDF+G  NLE+
Sbjct: 614  KSLPKDFSPKHLVDLSMPYSHIKKLWKGIKVLKSLKSMDLSHSKCLIETPDFSGITNLER 673

Query: 460  LILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGL 519
            L+LEGC  L E+HPSL    KL  L++KDC                   L+ LP+ I   
Sbjct: 674  LVLEGCINLPEVHPSLGDLKKLNFLSLKDCKM-----------------LRRLPSRIWNF 716

Query: 520  KCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNC-- 577
            K L TL +SG  KF EFPE   ++E L ELH +GT +R LP S   +  L  L+ + C  
Sbjct: 717  KSLRTLILSGCSKFEEFPENFGNLEMLKELHEDGTVVRALPPSNFSMRNLKKLSFRGCGP 776

Query: 578  ---------RSLEILPVTV---SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT 625
                     RS   +  TV   SNL  L+ L LS C+                    DG 
Sbjct: 777  ASASWLWSKRSSNSICFTVPSSSNLCYLKKLDLSDCN------------------ISDGA 818

Query: 626  SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI 685
            ++     S+  L+ LE LNLS   N V LP ++  L  L  L L  C +L+ +P+    +
Sbjct: 819  NL----GSLGFLSSLEDLNLSG-NNFVTLP-NMSGLSHLVFLGLENCKRLQALPQFPSSL 872

Query: 686  ESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGAL 745
            E L                       ++R +  + LP++SGL  L+ L L +C  +E AL
Sbjct: 873  EDL-----------------------ILRGNNFVTLPNMSGLSHLKTLVLGNCKRLE-AL 908

Query: 746  PSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVN 805
            P                                               QLP +IR +   
Sbjct: 909  P-----------------------------------------------QLPSSIRSLNAT 921

Query: 806  GCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVP 865
             C SL T                  +SLKLL    L      E L++       ++ V+P
Sbjct: 922  DCTSLGT-----------------TESLKLLRPWEL------ESLDS------DVAFVIP 952

Query: 866  GSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF-------HVLKN-------- 910
            GS IP+W  YQ+  + I    P N       +G+A+  VF       H L          
Sbjct: 953  GSRIPDWIRYQSSENVIEADLPLNW--STNCLGFALALVFSSQPPVSHWLWAEVFLDFGT 1010

Query: 911  ---SRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPL 967
               S    CF  +     NC + H +              DH+ L Y          +P+
Sbjct: 1011 CCCSIETQCF--FHLEGDNCVLAHEV--------------DHVLLNY----------VPV 1044

Query: 968  ESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDE 1005
            + +L P +  H+  +F      G E+K CGL  VY++E
Sbjct: 1045 QPSLSPHQVIHIKATFAITSETGYEIKRCGLGLVYVNE 1082


>gi|332330341|gb|AEE43927.1| TIR-NBS-LRR resistance protein muRdr1C [Rosa multiflora]
          Length = 1139

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 289/695 (41%), Positives = 422/695 (60%), Gaps = 24/695 (3%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD++ +++  L+D  ++DVR IGI GMGG+GKTT+AR+VY  ISH+F+   FLD+VR++S
Sbjct: 199 MDTKLKEIDVLLDKEANDVRFIGIWGMGGIGKTTLARLVYGKISHQFDVCIFLDDVRKVS 258

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +   L  LQ+++ SQ+LK  D  + +V+ G+ M+      K VLLV+D+V   ++L++L 
Sbjct: 259 TIHDLDDLQKRIRSQILKEEDVQVGDVYSGLAMIKRYFCNKAVLLVLDNVDQSEKLENLV 318

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G ++WFG  SRIIIT+R+ H+L  HG++E Y+  GLN  EALQLF+++AF+  +P ++  
Sbjct: 319 GEKDWFGLRSRIIITTRNRHVLVRHGIEEPYELKGLNQYEALQLFSLEAFRKCEPEEDYA 378

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +L    + YA GLPLAL++LGSFL  RS+D W ST ++L+  P   + +IL++SFDGL E
Sbjct: 379 KLCKHFVTYAAGLPLALKILGSFLYKRSLDSWSSTFQKLKQTPNPTVFEILKLSFDGLDE 438

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
           +EKK FLDIACF +  D + +   +    F   I + VL E+ L+T+ +N ++MHDL+QE
Sbjct: 439 MEKKTFLDIACFRRLYDNESMIEQVSSSEFSSRIAMDVLAERSLLTISHNQIYMHDLIQE 498

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G +IV RQ  +E G RSRLW   ++ HV T++TGTE+ EGI L   H +       + +
Sbjct: 499 MGCEIV-RQENKEPGGRSRLWLRNDIFHVFTKNTGTEVTEGIFL---HLDKLEEADWNLE 554

Query: 361 AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
           AFSKM  L+LL I NL+L  G +YL N L+ L W  YP K LP   Q D+  E+ + +S 
Sbjct: 555 AFSKMCELKLLYIHNLRLSLGPKYLPNALKFLKWSWYPSKSLPPCFQPDELTELTLVHSN 614

Query: 421 IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
           I  LW G K L  LK + LS S NL R PDFTG P+LEKLILEGC  L +IHPS+    +
Sbjct: 615 IDHLWNGKKSLGNLKSIDLSDSINLTRTPDFTGIPSLEKLILEGCISLVKIHPSIASLKR 674

Query: 481 LIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKFR 534
           L   N ++C S+ +LPG++ M+ LE  +      LK +P  +   K LS L + G     
Sbjct: 675 LKFWNFRNCKSIKSLPGEVDMEFLETFDVSGCSKLKMIPEFVGQTKRLSRLCLGG-TAVE 733

Query: 535 EFPEIVEHM-EHLSELHLEGTAIRGLPLSIELLSGLV-----LLNLKNCRSLEILPVTVS 588
           + P  +EH+ E L EL L G  IR  P S  L   L+     L   K+   L  L  ++ 
Sbjct: 734 KLPSSIEHLSESLVELDLSGIVIREQPYSRFLKQNLIASSFGLFPRKSPHPLLPLLASLK 793

Query: 589 NLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
           +   LR+LKL+ C+  + + P  + S+  L  L L G +   +P+SI LL+KL    + +
Sbjct: 794 HFSSLRTLKLNDCNLCEGEIPNDIGSLSSLKRLELRGNNFVSLPASIHLLSKLTYFGVEN 853

Query: 648 CKNLVRLPSSIIALKSLKTLNL--SGCFKLENVPE 680
           C  L +LP    AL     LN+  + C  L+  P+
Sbjct: 854 CTKLQQLP----ALPVSDYLNVLTNNCTSLQVFPD 884



 Score =  196 bits (498), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 171/531 (32%), Positives = 248/531 (46%), Gaps = 83/531 (15%)

Query: 589  NLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSD 647
            +L  L+S+ LS    L + P+    +  L +L L+G  S+ ++  SI  L +L+  N  +
Sbjct: 624  SLGNLKSIDLSDSINLTRTPDFT-GIPSLEKLILEGCISLVKIHPSIASLKRLKFWNFRN 682

Query: 648  CKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI---------------------- 685
            CK++  LP  +  ++ L+T ++SGC KL+ +PE +GQ                       
Sbjct: 683  CKSIKSLPGEV-DMEFLETFDVSGCSKLKMIPEFVGQTKRLSRLCLGGTAVEKLPSSIEH 741

Query: 686  --ESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK-----------LPSLSGLCSLRK 732
              ESL ELD+SG  +     +  ++  NL+  S  L            L SL    SLR 
Sbjct: 742  LSESLVELDLSGIVI-REQPYSRFLKQNLIASSFGLFPRKSPHPLLPLLASLKHFSSLRT 800

Query: 733  LNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSL 792
            L L DCNL EG +P+DIG+L SLK L L  N+FVSLP SI  LSKL    +E+C +LQ L
Sbjct: 801  LKLNDCNLCEGEIPNDIGSLSSLKRLELRGNNFVSLPASIHLLSKLTYFGVENCTKLQQL 860

Query: 793  PQLP-PNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLE 851
            P LP  +   V  N C SL    D   L +     + C + L    +    +S+L+ ++E
Sbjct: 861  PALPVSDYLNVLTNNCTSLQVFPDPPDLSRLSEFFLDCSNCLSCQDSSYFLYSVLKRWIE 920

Query: 852  -------------AVSNTR--QHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKL 896
                           +N R  + +  V+PGSEIPEWF  Q+ G  +T   PS+  N  K 
Sbjct: 921  IQVLSRCDMMVHMQETNRRPLEFVDFVIPGSEIPEWFNNQSVGDRVTEKLPSDACN-SKW 979

Query: 897  VGYAICCVFHVLKNSRG--NNCFGSYPTHQLNCHIGHGIYGIGFRD---KFGQAGSDHLW 951
            +G+A+C +     N        F    T+ + C+     YGIGF        Q  SDHLW
Sbjct: 980  IGFAVCALIVPQDNPSALLERPFLDPDTYGIECYWND--YGIGFVGLVVPVKQFVSDHLW 1037

Query: 952  LLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLG----QGLEVKMCGLHPVYMDEVE 1007
            LL L           L    +P     VN  FE        +G++VK CG+  +Y  +VE
Sbjct: 1038 LLVL-----------LSPFRKPENCLEVNFVFEITRAVGNNRGMKVKKCGVRALYEHDVE 1086

Query: 1008 ELDQTTNQ--PSRFTVYN--LNEFDQHFVGSKMIVATT-SKRSLTEYFGAE 1053
            EL    NQ   S  ++Y   ++E +   V +K   AT+ S  S  EY+ AE
Sbjct: 1087 ELISKMNQSKSSSISLYEEGMDEQEGAMVKAKHEAATSGSGGSDDEYYSAE 1137


>gi|105922849|gb|ABF81440.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1228

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 289/627 (46%), Positives = 380/627 (60%), Gaps = 68/627 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-I 59
           +DSR E L   +D  + +   IGICGMGG+GKTT+ARVVYD I  +FE S FL NVRE  
Sbjct: 277 IDSRLEVLNGYIDEETGEAIFIGICGMGGIGKTTVARVVYDRIRWQFEGSCFLANVREAF 336

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           + K G   LQ QLLS++L +   +I +   GI+M+  RLQRKK+L+V+DDV D KQL+SL
Sbjct: 337 AEKDGRRHLQEQLLSEIL-MERANICDSSRGIEMIKRRLQRKKILVVLDDVDDHKQLESL 395

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           A   +WFG GSRIIITSRD+ +L  +GV  +Y+   LN D+AL LF+ KA K  QP ++ 
Sbjct: 396 AAESKWFGPGSRIIITSRDKQVLTRNGVARIYEAEKLNDDDALTLFSQKALKNDQPAEDF 455

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V+LS +++ YA GLPLALEV+GSF+ GRS+ EW S + RL   P  EI+D+L+I FDGL 
Sbjct: 456 VELSKQVVGYANGLPLALEVIGSFMHGRSILEWGSAINRLNDIPDREIIDMLRIGFDGLH 515

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           ELEKKIFLDIACF KG  +D +   L+ CGFH  IG +VLIEK LI+V            
Sbjct: 516 ELEKKIFLDIACFLKGFKKDRIIRILDSCGFHAHIGTQVLIEKSLISV------------ 563

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
                                          +   G E +E I LD    +  ++   + 
Sbjct: 564 -------------------------------SRDQGKETIEAIFLDMPGIKEALW---NM 589

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           KAFSKMT LRLLKI N+QL  G E LSN+LR L W  YP K LP+ LQ+D+ +E++M  S
Sbjct: 590 KAFSKMTKLRLLKIDNVQLSEGPEDLSNKLRFLEWNSYPSKSLPAGLQVDELVELHMANS 649

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
            I +LW G K    LK++ LS+S NL + PD TG PNLE LI+EGCT L E+HPSL  H 
Sbjct: 650 SIEQLWYGYKSAVNLKIINLSNSLNLSKTPDLTGIPNLESLIIEGCTSLSEVHPSLAHHK 709

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
           KL  +N+ +C S+  LP  + M+SL+                + TLD  G  K  +FP+I
Sbjct: 710 KLQYMNLVNCKSIRILPNNLEMESLK----------------ICTLD--GCSKLEKFPDI 751

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
           V +M  L  L L+ T I  L  SI  L GL LL++ +C++LE +P ++  LK L+ L LS
Sbjct: 752 VGNMNELMVLRLDETGITELSSSIRHLIGLGLLSMNSCKNLESIPSSIGFLKSLKKLDLS 811

Query: 600 GCSKLKKFPEIVRSMKDLSELFLDGTS 626
           GCS+LK  PE +  ++ L E   DG S
Sbjct: 812 GCSELKYIPENLGKVESLEE--FDGLS 836



 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/264 (37%), Positives = 150/264 (56%), Gaps = 21/264 (7%)

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNL--KSLPTTISGLKC---LSTLDVSGDL 531
           L NKL  L      S  +LP  + +  L +L++   S+     G K    L  +++S  L
Sbjct: 615 LSNKLRFLEWNSYPSK-SLPAGLQVDELVELHMANSSIEQLWYGYKSAVNLKIINLSNSL 673

Query: 532 KFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
              + P++   + +L  L +EG T++  +  S+     L  +NL NC+S+ ILP  +  +
Sbjct: 674 NLSKTPDLT-GIPNLESLIIEGCTSLSEVHPSLAHHKKLQYMNLVNCKSIRILPNNL-EM 731

Query: 591 KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKN 650
           + L+   L GCSKL+KFP+IV +M +L  L LD T I E+ SSI  L  L LL+++ CKN
Sbjct: 732 ESLKICTLDGCSKLEKFPDIVGNMNELMVLRLDETGITELSSSIRHLIGLGLLSMNSCKN 791

Query: 651 LVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD-IS------GTAVPHST- 702
           L  +PSSI  LKSLK L+LSGC +L+ +PE LG++ESLEE D +S      G AVP +  
Sbjct: 792 LESIPSSIGFLKSLKKLDLSGCSELKYIPENLGKVESLEEFDGLSNPRTGFGIAVPGNEI 851

Query: 703 -SWYSYIPINLMRKSVALKLPSLS 725
             W+++        S+++++PS S
Sbjct: 852 PGWFNH---QSKGSSISVQVPSWS 872



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 197/445 (44%), Gaps = 99/445 (22%)

Query: 614  MKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCF 673
            + +L EL +  +SI+++    +    L+++NLS+  NL + P  +  + +L++L + GC 
Sbjct: 638  VDELVELHMANSSIEQLWYGYKSAVNLKIINLSNSLNLSKTPD-LTGIPNLESLIIEGCT 696

Query: 674  KLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKL 733
             L  V  +L   + L+ +++                     KS+ + LP+   + SL+  
Sbjct: 697  SLSEVHPSLAHHKKLQYMNLVNC------------------KSIRI-LPNNLEMESLKIC 737

Query: 734  NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
             L  C+ +E   P  +GN+  L  L L +     L +SI HL  L  + +  CK L+S+P
Sbjct: 738  TLDGCSKLE-KFPDIVGNMNELMVLRLDETGITELSSSIRHLIGLGLLSMNSCKNLESIP 796

Query: 794  Q---LPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYL 850
                   +++++ ++GC+ L  + + L            ++SL              E  
Sbjct: 797  SSIGFLKSLKKLDLSGCSELKYIPENL----------GKVESL--------------EEF 832

Query: 851  EAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHV--- 907
            + +SN R    + VPG+EIP WF +Q++GSSI+V  PS        +G+  C  F     
Sbjct: 833  DGLSNPRTGFGIAVPGNEIPGWFNHQSKGSSISVQVPS------WSMGFVACVAFSAYGE 886

Query: 908  --LKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRL 965
              L+     N   +YP+  L C   + I          Q  SDH+WL YLS     +++ 
Sbjct: 887  RPLRCDFKANGRENYPS--LMCISCNSI----------QVLSDHIWLFYLSFDYLKELK- 933

Query: 966  PLESNLEPFESNHVNVSFEPWLGQGLEVKMCG---LHPVYMDEVEELDQTTNQPSRFTVY 1022
              E   E F  +++ +SF  +  + ++VK CG   L  +Y+         T QPS     
Sbjct: 934  --EWQHESF--SNIELSFHSY-ERRVKVKNCGVCLLSSLYI---------TPQPS----- 974

Query: 1023 NLNEFDQHFVGSKMIVATTSKRSLT 1047
                   HF+ +    A++ K SLT
Sbjct: 975  -----SAHFIVTSKEAASSYKASLT 994


>gi|399920191|gb|AFP55538.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1320

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 320/870 (36%), Positives = 455/870 (52%), Gaps = 147/870 (16%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M ++ E++  L+D  ++DVR IGI GMGGLGKTT+AR+VY+ ISH+FE   FL NVRE+S
Sbjct: 199  MHTKLEEIDVLLDIETNDVRFIGIWGMGGLGKTTLARLVYEKISHQFEVCVFLANVREVS 258

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            +  GLV LQ+Q+LS +LK  +  +WNV+ GI M+      K VLLV+DDV   +QL+ LA
Sbjct: 259  ATHGLVYLQKQILSHILKEENAQVWNVYSGITMIKRCFCNKAVLLVLDDVDQSEQLEHLA 318

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            G ++WFG  SRIIIT+RD H+L TH +++ Y+  GL  DEALQLF+ KAF+ ++P ++  
Sbjct: 319  GEKDWFGLRSRIIITTRDRHVLVTHDIEKPYELKGLEEDEALQLFSWKAFRKHEPEEDYA 378

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            + S  ++R AGGLPLAL+ LGSFL  RS D W S L +L+  P   + D+L++S+DGL E
Sbjct: 379  EQSKSVVRIAGGLPLALKTLGSFLCKRSPDAWESALAKLQNTPEKTVFDLLKVSYDGLDE 438

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT-LWMHDLLQ 299
            +EKKIFLDIACF    +   +   L        I I VL+EK L+T+ +NT + MHDL++
Sbjct: 439  MEKKIFLDIACFSSQCEAKLIIELLYSYDVCTRIAIDVLVEKSLLTISSNTEIGMHDLIR 498

Query: 300  ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
            E+G +IV++QSP+E G RSRLW   ++ HV T++TGTE+ EGI L  +  E   +   + 
Sbjct: 499  EMGCEIVRQQSPKEPGGRSRLWLRNDIFHVFTKNTGTEVTEGIFLHLHKLEEADW---NP 555

Query: 360  KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
            +AFSKM NL+LL I NL+L  G ++L + LR+L W  YP K LP   Q  +  E+ +  S
Sbjct: 556  EAFSKMCNLKLLYIHNLRLSLGPKFLPDALRILKWSWYPSKSLPPGFQPHELAELSLPCS 615

Query: 420  RIGEL------------------------------------------WKGI--------- 428
             I  L                                          W+ +         
Sbjct: 616  EIDHLWNGIKFIVPRGLGVGPNQGVNLGEVDLGEVRKLVREERDEKNWRWVVSVLEEGRK 675

Query: 429  ---KHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILN 485
               K+L KLK + LS+S NL R PDFTG  NLEKL+LEGCT L +IHPS+ L  +L I N
Sbjct: 676  RWDKYLGKLKSIDLSYSINLTRTPDFTGIQNLEKLVLEGCTNLVKIHPSIALLKRLKIWN 735

Query: 486  MKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
             ++C S+ +LP ++ M+ LE  +      LK +P  +  +K LS   + G     + P  
Sbjct: 736  FRNCKSIKSLPSEVNMEFLETFDVSGCSKLKMIPEFVGQMKRLSKFCLGGT-AVEKLPSS 794

Query: 540  VEHM-EHLSELHLEGTAIRGLPLSIEL------------------------------LSG 568
             EH+ E L EL L G  IR  P S  L                               S 
Sbjct: 795  FEHLSESLVELDLSGIVIREQPYSFFLKLQNLRVSVCGLFPRKSPHPLIPVLASLKHFSY 854

Query: 569  LVLLNLKNC-----------------RSLEI-------LPVTVSNLKCLRSLKLSGCSKL 604
            L  LNL +C                 + LE+       LP ++  L  LR + +  C++L
Sbjct: 855  LTELNLSDCNLCEGEIPNDIGSLSSLKYLELGGNNFVSLPASIRLLSKLRHIDVENCTRL 914

Query: 605  KKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS- 663
            ++ PE+  +   +     + TS++  P   +L    E     DC N +    S   L S 
Sbjct: 915  QQLPELPPASDRILVTTDNCTSLQVFPDPPDLSRVSEF--WLDCSNCLSCQDSSYFLHSV 972

Query: 664  LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPS 723
            LK L          V ET    ESL+ + I G+ +P    W++   +     SV  KLP 
Sbjct: 973  LKRL----------VEETPCSFESLKFI-IPGSEIPE---WFNNQSVG---DSVTEKLP- 1014

Query: 724  LSGLCSLRKLNLTDCNLM-----EGALPSD 748
                C+ + +    C L+       A+P D
Sbjct: 1015 -LDACNSKWIGFAVCALIVPQDNPSAVPED 1043



 Score =  196 bits (497), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 157/506 (31%), Positives = 246/506 (48%), Gaps = 58/506 (11%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
            L+S+ LS    L + P+    +++L +L L+G T++ ++  SI LL +L++ N  +CK++
Sbjct: 684  LKSIDLSYSINLTRTPDFT-GIQNLEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNCKSI 742

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPIN 711
              LPS +  ++ L+T ++SGC KL+ +PE +GQ++ L +  + GTAV    S + ++  +
Sbjct: 743  KSLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQMKRLSKFCLGGTAVEKLPSSFEHLSES 801

Query: 712  LM--------------------------------RKSVALKLPSLSGL---CSLRKLNLT 736
            L+                                RKS    +P L+ L     L +LNL+
Sbjct: 802  LVELDLSGIVIREQPYSFFLKLQNLRVSVCGLFPRKSPHPLIPVLASLKHFSYLTELNLS 861

Query: 737  DCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP 796
            DCNL EG +P+DIG+L SLK L L  N+FVSLP SI  LSKL +I++E+C RLQ LP+LP
Sbjct: 862  DCNLCEGEIPNDIGSLSSLKYLELGGNNFVSLPASIRLLSKLRHIDVENCTRLQQLPELP 921

Query: 797  PNIRQVRV--NGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVS 854
            P   ++ V  + C SL    D   L +     + C + L    +     S+L+  +E   
Sbjct: 922  PASDRILVTTDNCTSLQVFPDPPDLSRVSEFWLDCSNCLSCQDSSYFLHSVLKRLVEETP 981

Query: 855  NTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRG- 913
             + + L  ++PGSEIPEWF  Q+ G S+T   P +  N  K +G+A+C +     N    
Sbjct: 982  CSFESLKFIIPGSEIPEWFNNQSVGDSVTEKLPLDACN-SKWIGFAVCALIVPQDNPSAV 1040

Query: 914  ---NNCFGSYPTHQLNCHI-----GHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRL 965
                N           C I     G+GI  +G R    Q  SDHL L+ L        R 
Sbjct: 1041 PEDPNLDPDICLDPDTCLIYCLSNGYGICCVGRRIPVKQFVSDHLLLVVLPSP----FRC 1096

Query: 966  PLESNLEPFESNHVNVSFEPWLGQG--LEVKMCGLHPVYMDEVEELDQTTNQPSRFTVYN 1023
            P E  L  + ++ V   F+  +G    ++VK CG+  +Y  + EEL    NQ    ++  
Sbjct: 1097 P-EDRLADWWNDEVTFFFKA-VGNNRCIKVKKCGVRALYEHDTEELTSKMNQSKSSSISV 1154

Query: 1024 LNEFDQHFVGSKMIVATTSKRSLTEY 1049
                D+            +KR L  +
Sbjct: 1155 YEAMDEQEGAMVKATGGRNKRELWHW 1180


>gi|359495250|ref|XP_002271616.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1427

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 314/872 (36%), Positives = 488/872 (55%), Gaps = 106/872 (12%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MD   ++L+ L+ S S D+ ++GI G GG+GKTTIA++VY+ I ++F ++ FL +VRE  
Sbjct: 197  MDFHLKELKSLLSSDSHDISVVGIYGTGGIGKTTIAKIVYNEIQYQFTSASFLQDVRETF 256

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            +K   + LQ+QLL   +   D    N+  GID++ +RL  KKVL+VIDDV +++QL+S+A
Sbjct: 257  NKRCQLQLQQQLLHDTVG-DDEEFRNINKGIDIIKARLSSKKVLIVIDDVDELEQLESVA 315

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            G+ +WFG GS IIIT+R+ HLL  +     Y+  GL+Y EALQLF+  AFK   P ++ V
Sbjct: 316  GSPKWFGPGSTIIITTRNRHLLVEYEATISYEATGLHYREALQLFSRHAFKQNDPKEDYV 375

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
             LS  +++YA GLPLAL+VLGS L G ++++W S L +L+     +I D+L+IS DGL  
Sbjct: 376  DLSNCMVQYAQGLPLALKVLGSSLRGMTIEQWESALNKLKTNLNKKINDVLRISLDGLDY 435

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             +K++FLDIACFFKG   D+V+  L  C   P I I+ L ++CL+T+ +N + MHDL+QE
Sbjct: 436  SQKEVFLDIACFFKGECEDFVSRILYDCKLDPKINIKNLHDRCLVTIRDNVIQMHDLIQE 495

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G  IV+ + P +  K SRLW  +++ +  +   G E ++ I LD           + +K
Sbjct: 496  MGYAIVREECPRDPHKWSRLWDADDIYNAFSRREGMENIQTISLD----------LSRSK 545

Query: 361  AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
                 T     ++C                        L+ LPS+   ++ IEI +  S 
Sbjct: 546  EIQFST-----EVCT-----------------------LRSLPSSFCGEQLIEINLKSSN 577

Query: 421  IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
            I  LWKG K L+KLK + LS+S+ L++MP+F+  PNLE+L LEGCT L E+H S+    +
Sbjct: 578  IKRLWKGNKRLEKLKGIDLSNSKQLVKMPEFSSMPNLERLNLEGCTSLCELHSSIGDLKQ 637

Query: 481  LIILNMKDCTSLITLPGKILMKSLEKL-----------------------------NLKS 511
            L  LN++ C  L + P  +  +SLE L                              +K 
Sbjct: 638  LTYLNLRGCEQLQSFPTNMKFESLEVLCLNQCRKLKKIPKILGNMGHLKKLCLNGSGIKE 697

Query: 512  LPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIEL------ 565
            LP +I  L+ L  LD+S   KF +FPEI  +M+ L  L L+ TAI+ LP SI        
Sbjct: 698  LPDSIGYLESLEILDLSNCSKFEKFPEIRGNMKCLKRLSLDETAIKELPNSIGSLTSLEL 757

Query: 566  ------------------LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKF 607
                              +  L++LNL+    ++ LP ++  L+ L  L LS CSK +KF
Sbjct: 758  LSLRKCSKFEKFSDVFTNMRRLLILNLRE-SGIKELPGSIGCLEFLLQLDLSYCSKFEKF 816

Query: 608  PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL 667
            PEI  +MK L  L LD T+IKE+P+SI  +T LE+L+L  C    +       ++ L+ L
Sbjct: 817  PEIRGNMKRLKRLSLDETAIKELPNSIGSVTSLEILSLRKCSKFEKFSDVFTNMRHLQIL 876

Query: 668  NL--SGCFKLENVPETLGQIESLEELDISGTAVPHSTS---W-YSYIPINLMRKSVALKL 721
            NL  SG   ++ +P ++G +ESL +LD+S  +     S   W   ++ +  ++ +   +L
Sbjct: 877  NLRESG---IKELPGSIGCLESLLQLDLSNCSKFEKFSEIQWNMKFLRVLYLKHTTIKEL 933

Query: 722  P-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLN 780
            P S+  L  L  L+L  C+ +E  LP    ++ +L+ L L+  +   LP SI + + L +
Sbjct: 934  PNSIGCLQDLEILDLDGCSNLE-RLPEIQKDMGNLRALSLAGTAIKGLPCSIRYFTGLHH 992

Query: 781  IELEDCKRLQSLPQLP--PNIRQVRVNGCASL 810
            + LE+C+ L+SLP +    +++ + + GC++L
Sbjct: 993  LTLENCRNLRSLPDICGLKSLKGLFIIGCSNL 1024



 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 205/719 (28%), Positives = 307/719 (42%), Gaps = 127/719 (17%)

Query: 356  CASAKAFSKM-TNLRLLKICNL------QLPNGLEYLSNRLRL-LGWRGYPLKFLPSNLQ 407
            C+  + FS + TN+R L I NL      +LP  +  L   L+L L +     KF      
Sbjct: 763  CSKFEKFSDVFTNMRRLLILNLRESGIKELPGSIGCLEFLLQLDLSYCSKFEKFPEIRGN 822

Query: 408  MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPNLEKLILEGCT 466
            M +   + +  + I EL   I  +  L+++ L       +  D FT   +L+ L L   +
Sbjct: 823  MKRLKRLSLDETAIKELPNSIGSVTSLEILSLRKCSKFEKFSDVFTNMRHLQILNLRE-S 881

Query: 467  RLYEIHPSLLLHNKLIILNMKDCT-----SLITLPGKIL-MKSLEKLNLKSLPTTISGLK 520
             + E+  S+     L+ L++ +C+     S I    K L +  L+   +K LP +I  L+
Sbjct: 882  GIKELPGSIGCLESLLQLDLSNCSKFEKFSEIQWNMKFLRVLYLKHTTIKELPNSIGCLQ 941

Query: 521  CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL 580
             L  LD+ G       PEI + M +L  L L GTAI+GLP SI   +GL  L L+NCR+L
Sbjct: 942  DLEILDLDGCSNLERLPEIQKDMGNLRALSLAGTAIKGLPCSIRYFTGLHHLTLENCRNL 1001

Query: 581  EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
              LP  +  LK L+ L + GCS L+ F EI   M+ L  L L  T I E+PSSIE L  L
Sbjct: 1002 RSLP-DICGLKSLKGLFIIGCSNLEAFSEITEDMEQLKRLLLRETGITELPSSIEHLRGL 1060

Query: 641  ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
            + L L +CKNLV LP SI +L  L  L +  C KL N+P+ L                  
Sbjct: 1061 DSLELINCKNLVALPISIGSLTCLTILRVRNCTKLHNLPDNLR----------------- 1103

Query: 701  STSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
                       L R+              L KL+L  CNLMEG +PSD+  L SL+ LY+
Sbjct: 1104 ----------GLRRR--------------LIKLDLGGCNLMEGEIPSDLWCLSSLESLYV 1139

Query: 761  SKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLC 820
            S+N    +P  IT L KL  + +  C  L+ + +LP ++  +   GC             
Sbjct: 1140 SENHIRCIPAGITQLFKLKTLNMNHCPMLKEIGELPSSLTYMEARGC------------- 1186

Query: 821  KSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNT-RQHLSVVVPGSE-IPEWFMYQNE 878
                    CL++     +  L  S+L+ +  A+ +T       V+PGS  IPEW  +Q  
Sbjct: 1187 -------PCLETETF--SSPLWSSLLKYFKSAIQSTFFGPRRFVIPGSSGIPEWVSHQRI 1237

Query: 879  GSSITVTRPSNLYNKKKLVGY---------------------AIC--CVFHVLKNSRGNN 915
            G  + +  P N Y     +G+                     A C   + H  ++ R NN
Sbjct: 1238 GCEVRIELPMNWYEDNNFLGFVLFFHHVPLDNDECETTEGSTAHCELTISHGDQSERLNN 1297

Query: 916  CFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQT-------CYDIRLPLE 968
             +  YP  +  C+     Y     + F     D+ + ++ S  T        Y  ++ + 
Sbjct: 1298 IW-FYPESK-TCYSYDLSYVFDISNDFDSLNEDNCFDVHYSGSTSDPAIWVTYFPQIKIR 1355

Query: 969  SNLEPFESNHVNVSFEPWLGQG---------LEVKMCGLHPVYMDEVEELDQTTNQPSR 1018
                    N+    F   +G G          +VK CG+H +Y  +         QPSR
Sbjct: 1356 GTYRSSWWNNFKARFHTPIGSGSFKCGDNACFKVKSCGIHLLYAQD----QMHCTQPSR 1410


>gi|82794024|gb|ABB91439.1| MRGH-J [Cucumis melo]
          Length = 1007

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 315/832 (37%), Positives = 450/832 (54%), Gaps = 93/832 (11%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-I 59
           M+ R +K+  LM  G  D R IGI GMGG+GKTTIA+ V+  ++ EF  S  L+NV++ +
Sbjct: 199 MNLRLKKMNMLMGIGLDDKRFIGIWGMGGVGKTTIAKAVFKSVAREFHGSCILENVKKTL 258

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            +  GLVSLQ +LLS  L      I +  +G++M+   L  +KV +V+DDV    Q++ L
Sbjct: 259 KNVRGLVSLQEKLLSDTLMRGKVQIKDG-EGVEMIKKNLGNRKVFVVLDDVDHFSQVKDL 317

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  EWFG GSRIIIT+RDE LL + G+D  Y       +EALQLF  +AF    P +  
Sbjct: 318 AGGEEWFGCGSRIIITTRDEGLLLSLGIDIRYNVESFGDEEALQLFCHEAFGVKFPKKGY 377

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           + L    + YA GLPLA++ LG  L  R    W   + +L      ++ + L+IS+D L 
Sbjct: 378 LDLCMPFVEYAEGLPLAIKALGHSLHNRLFKSWEGAIRKLNNSLNRQVYENLKISYDALG 437

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIG--------------------IRVL 279
           + E++IFL IACF KG  +D V +           G                    ++ L
Sbjct: 438 KEERRIFLYIACFLKGQSKDLVIDTFVSFEIDAADGLLTRKKAADVLCIKETAADALKKL 497

Query: 280 IEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELV 339
            EK LITV N+ + MH+L Q+LGQ+I + +S     K SRLW  E++ H L    G E +
Sbjct: 498 QEKSLITVVNDKIQMHNLHQKLGQEIFREESSR---KSSRLWHREDMNHALRHKQGVEAI 554

Query: 340 EGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPL 399
           E I LD+  H  E +L  + K FS MT L++L++ N+ L   LEYLS++LRLL W GYP 
Sbjct: 555 ETIALDSNEH-GESHL--NTKFFSAMTGLKVLRVHNVFLSGDLEYLSSKLRLLSWHGYPF 611

Query: 400 KFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEK 459
           + LPS+ Q ++ +E+ +  S I   W+  + LDKLKV+ LS+S+ L++ PD +  PNLE+
Sbjct: 612 RNLPSDFQPNELLELNLQNSCIENFWRETEKLDKLKVINLSNSKFLLKTPDLSTVPNLER 671

Query: 460 LILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGL 519
           L+L GC RL E+H S+ +   LI L++KDC S                 LKS+ + IS L
Sbjct: 672 LVLNGCIRLQELHLSVGILKHLIFLDLKDCKS-----------------LKSICSNIS-L 713

Query: 520 KCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRS 579
           + L  L +SG  +   FPEIV +M+ L+ELHL+GTAIR L  SI  L+ LVLL+L+NC++
Sbjct: 714 ESLKILILSGCSRLENFPEIVGNMKLLTELHLDGTAIRKLHASIGKLTSLVLLDLRNCKN 773

Query: 580 LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTK 639
           L  LP  +  L  ++ L L GCSKL + P+ + ++  L +L + GTSI  +P S+ LLT 
Sbjct: 774 LLTLPNAIGCLTSIKHLALGGCSKLDQIPDSLGNISCLEKLDVSGTSISHIPLSLRLLTN 833

Query: 640 LELLNLSDCKNLVR-LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
           L+ LN   CK L R L  S+  L S    N S  F L  +        S++ L+ S    
Sbjct: 834 LKALN---CKGLSRKLCHSLFPLWSTPRSNDSHSFGLRLIT-CFSNFHSVKVLNFSD--- 886

Query: 699 PHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKEL 758
                                        C L   ++ D          D+  L SL  L
Sbjct: 887 -----------------------------CKLADGDIPD----------DLSCLSSLHFL 907

Query: 759 YLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
            LS+N F +LP S+  L  L  + L++C RL+SLP+ P ++  V    C SL
Sbjct: 908 DLSRNLFTNLPNSLGQLINLRCLVLDNCSRLRSLPKFPVSLLYVLARDCVSL 959


>gi|399920222|gb|AFP55569.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1134

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 296/695 (42%), Positives = 425/695 (61%), Gaps = 42/695 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD++ E++  L+D  ++DVR IGI GMGG+GKTT+AR+VY+ IS++F+   FLD+VR+  
Sbjct: 199 MDTKWEEIDVLLDKEANDVRFIGIWGMGGMGKTTLARLVYEKISYQFDVCIFLDDVRKAH 258

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +  GLV L + +LSQLLK  +  +WNV+ GI  +   +  K VLLV+D+V   +QL+ L 
Sbjct: 259 ADHGLVYLTKTILSQLLKEENVQVWNVYSGIAWIKRCVCNKAVLLVLDNVDQSEQLEKLV 318

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G ++WFG  SRIIIT+R++ +L THGV++ Y+  GLN DEALQLF+ KAF+ Y+P  + V
Sbjct: 319 GEKDWFGLRSRIIITTRNQLVLVTHGVEKPYELKGLNNDEALQLFSWKAFRKYEPEVDYV 378

Query: 181 QLSARIIRYAGGLPLALEVLGSFL-SGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           + S    RYAGG PLAL+ LGS L + RS+  W S L +L+  P   + D+L++S+D L 
Sbjct: 379 KHSMSFARYAGGHPLALKTLGSLLYNKRSLHSWSSALAKLQNTPDKTVFDLLKVSYDELD 438

Query: 240 ELEKKIFLDIACFFK-----GNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
           ++EKKIFLDIACF +      +D +++    +   F   I I VL ++ L+T+ +N ++M
Sbjct: 439 KMEKKIFLDIACFRRFRRLYDDDDEFMIE--QVYKFESRIAIDVLADRSLLTISHNHIYM 496

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           HDL++E+G +IV RQ  EE G RSRLW   ++ HV T +TGTE +EGI+LD    E   +
Sbjct: 497 HDLIREMGCEIV-RQENEEPGGRSRLWLRNDIFHVFTNNTGTEAIEGILLDLAELEEADW 555

Query: 355 LCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
              + +AFSKM  L+LL + NL+L  G ++L N LR L W  YP K LP   Q D+  E+
Sbjct: 556 ---NLEAFSKMCKLKLLYLHNLKLSVGPKFLPNALRFLNWSWYPSKSLPPCFQPDELTEL 612

Query: 415 YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
            + +S I  LW GIK    LK + LS+S NL R PDFTG PNLEKL+LEGCT L +IHPS
Sbjct: 613 SLVHSNIDHLWNGIKCSRNLKSIDLSYSINLTRTPDFTGIPNLEKLVLEGCTNLVKIHPS 672

Query: 475 LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFR 534
           + L  +L I N ++C S+ +LP ++ M+ LE                  T DVSG  K +
Sbjct: 673 ITLLKRLKIWNFRNCKSIKSLPSEVNMEFLE------------------TFDVSGCSKLK 714

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS-GLVLLNLKNCRSLEILPVTVSNLKCL 593
             PE V   + LS+L + G+A+  LP S E LS  LV L+L N   +   P ++   + L
Sbjct: 715 MIPEFVGQTKTLSKLCIGGSAVENLPSSFERLSKSLVELDL-NGIVIREQPYSLFLKQNL 773

Query: 594 RSL------KLSGCSKLKKFPEIVRSMKDLSELFLDGTSI--KEVPSSIELLTKLELLNL 645
           R        + S C  L      ++    L++L L+  ++   E+P+ I  L+ LELL L
Sbjct: 774 RVSFFGLFPRKSPCP-LTPLLASLKHFSSLTQLKLNDCNLCEGEIPNDIGYLSSLELLQL 832

Query: 646 SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
               N V LP+SI  L  LK +N+  C +L+ +PE
Sbjct: 833 RG-NNFVNLPASIHLLSKLKRINVENCKRLQQLPE 866



 Score =  179 bits (454), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 167/539 (30%), Positives = 248/539 (46%), Gaps = 101/539 (18%)

Query: 590  LKCLRSLK---LSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNL 645
            +KC R+LK   LS    L + P+    + +L +L L+G T++ ++  SI LL +L++ N 
Sbjct: 626  IKCSRNLKSIDLSYSINLTRTPDFT-GIPNLEKLVLEGCTNLVKIHPSITLLKRLKIWNF 684

Query: 646  SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWY 705
             +CK++  LPS +  ++ L+T ++SGC KL+ +PE +GQ ++L +L I G+AV +  S +
Sbjct: 685  RNCKSIKSLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQTKTLSKLCIGGSAVENLPSSF 743

Query: 706  SYIPINLM-------------------------------RKSVALKLP---SLSGLCSLR 731
              +  +L+                               RKS     P   SL    SL 
Sbjct: 744  ERLSKSLVELDLNGIVIREQPYSLFLKQNLRVSFFGLFPRKSPCPLTPLLASLKHFSSLT 803

Query: 732  KLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQS 791
            +L L DCNL EG +P+DIG L SL+ L L  N+FV+LP SI  LSKL  I +E+CKRLQ 
Sbjct: 804  QLKLNDCNLCEGEIPNDIGYLSSLELLQLRGNNFVNLPASIHLLSKLKRINVENCKRLQQ 863

Query: 792  LPQLPPNIR-QVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLA---FSMLR 847
            LP+LP     +V  + C SL    D   L +     ++ ++    +GN+      +S L+
Sbjct: 864  LPELPATDELRVVTDNCTSLQVFPDPPNLSRCPEFWLSGINCFSAVGNQGFRYFLYSRLK 923

Query: 848  EYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICC---- 903
            + LE    +  +  +V+PGSEIPEWF  Q+ G S+    PS   N  K +G A+C     
Sbjct: 924  QLLEETPWSLYYFRLVIPGSEIPEWFNNQSVGDSVIEKLPSYACN-SKWIGVALCFLIVP 982

Query: 904  ---------VFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLY 954
                     V H+   +R   C+        NC  GHG      +    Q  SDHL    
Sbjct: 983  QDNPSAVPEVRHLDPFTRVFCCWNK------NCS-GHGRLVTTVK----QIVSDHLLFAV 1031

Query: 955  LSR----------QTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMD 1004
            L +           TC +I+     +     S            +GL+VK CG   +Y  
Sbjct: 1032 LPKFIWKPQNCLEDTCTEIKFVFVVDQTVGNS------------RGLQVKKCGARILYEH 1079

Query: 1005 EVEELDQTTNQPSRFTVYNLNEFDQHFVGSKMIVATTSKRSLTEYFGAEASGSGCCDDE 1063
            + EEL    NQ S+ +  +L E         M+ AT           A  S SG  DDE
Sbjct: 1080 DTEELISKMNQ-SKSSSISLYEEAMDEQEGAMVKATQE---------ASTSRSGGSDDE 1128


>gi|359493388|ref|XP_003634583.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1196

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 365/1044 (34%), Positives = 555/1044 (53%), Gaps = 103/1044 (9%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MD   +++  L+++ S+ V M+GI G+GG+GKTTIA+VVY+ +  +F+   FL+NVRE S
Sbjct: 199  MDENLKEVELLINAQSNGVSMVGIYGIGGIGKTTIAKVVYNDMLDQFQRHSFLENVREKS 258

Query: 61   SKG-GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
                GL+ LQ++LL  +L   +  + N+ DGI M+  + + +KVL+V+DDV   KQL+ L
Sbjct: 259  KDDHGLLELQKKLLCDILMEKNLKLRNINDGIKMVKRKCRIEKVLIVLDDVDCQKQLKFL 318

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            A N E F  GS II+T+R++  L  H     Y+  GL + +A +LF   AF+   P  E 
Sbjct: 319  APNSECFHQGSIIIVTTRNKRCLDVHKSYSSYEAKGLAHTQAKELFCWNAFQQDHPEYE- 377

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
              LS  I+ YA GLPLAL VLGSFL  R VD W STL +L+  P  +I  +LQIS+DGL 
Sbjct: 378  -DLSNCILDYAKGLPLALVVLGSFLYQRDVDYWESTLHKLKTNPLEDIQKVLQISYDGLD 436

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
               K++FLDIACFF+  D+  VT  LEGC FHP  G+ VL E+CLI++ ++T+ MHDLLQ
Sbjct: 437  NKWKELFLDIACFFRNEDKKVVTRILEGCKFHPKSGLTVLHERCLISITDDTIRMHDLLQ 496

Query: 300  ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
            E+G  IV++  PE   + SRLW+ +++  VL ++ GT+ +EGI + N   +++  +  +A
Sbjct: 497  EMGWAIVRQNFPEHPEEWSRLWELQDIKSVLPQNKGTKNIEGISI-NRSWDSKKRIQLTA 555

Query: 360  KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
            +AF KM  LRLLK+                    W  YPL++LPSN  ++  +E+ + YS
Sbjct: 556  EAFRKMNRLRLLKV---------------KVYFHWDNYPLEYLPSNFHVENPVELNLWYS 600

Query: 420  RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH- 478
             I  LW+G     KLKV  LS+S +L+ + + +   NLE LIL+GCTR       LL H 
Sbjct: 601  NIEHLWEGNMPAKKLKVTDLSYSRHLVDISNISSMQNLETLILKGCTR-------LLKHL 653

Query: 479  NKLIILNMKDCTSLITLPGKI-LMKSLEKLNLKSLPT-------TISGLKCLSTLDVSGD 530
            N L  L++ +C +L++LP  I  + SL+ L+L             I  LK L  LD+S  
Sbjct: 654  NGLEELDLSNCKNLLSLPDSIGSLNSLQTLDLVECSKLVGFTNINIGSLKALEYLDLSWC 713

Query: 531  LKFREFPEIVEHMEHLSELHLEG-TAIRGLP-LSIELLSGLVLLNLKNCRSLEILPVTVS 588
                  P  +  +  L  L L G + ++G P ++   L  L LL+  +CR+LE LPV++ 
Sbjct: 714  ENLESLPNSIGSLSSLQTLLLIGCSKLKGFPDINFGSLKALELLDFSHCRNLESLPVSIY 773

Query: 589  NLKCLRSLKLSGCSKLKKFPEIVRSMK-DLSEL--FLDGTSIKEVPSSIELLTKLELLNL 645
            NL  L++L ++ C KL++  EI   +    S L   +  ++I       +  + LE LN 
Sbjct: 774  NLSSLKTLGITNCPKLEEMLEIKLGVDWPFSPLTCHISNSAITWYDDWHDCFSSLEALN- 832

Query: 646  SDC--KNLVRLPSSIIALKSLKTLNLSGCFKLENVPE-TLGQIESLEE--LDISGTAVPH 700
              C   +LV L  S+     ++   LSG F L ++   +LG   S+ E  LD     + H
Sbjct: 833  PQCPLSSLVEL--SVRKFYGMEEDILSGSFHLSSLQILSLGNFPSVAEGILD----KIFH 886

Query: 701  STSWYSYIPINLMR-KSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKEL 758
             +   S + ++L + K     +P  +  L  L++L+L DCNLMEG + + I +L SL+EL
Sbjct: 887  LS---SLVKLSLTKCKPTEEGIPGDIWNLSPLQQLSLRDCNLMEGKILNHICHLTSLEEL 943

Query: 759  YLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRV---NGCASLVTLLD 815
            YL  N F S+P  I+ LS L  ++L  CK LQ +P+LP ++R +     +G +S  +LL 
Sbjct: 944  YLGWNHFSSIPAGISRLSNLKALDLSHCKNLQQIPELPSSLRFLDAHCSDGISSSPSLLP 1003

Query: 816  ALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVP-GSEIPEWFM 874
                     +M+ C  S ++   K     ++  Y     N    + +V+P  S I EW  
Sbjct: 1004 I-------HSMVNCFKS-EIEDRK-----VINHYSYFWGNG---IGIVIPRSSGILEWIT 1047

Query: 875  YQNEG-SSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGI 933
            Y+N G + +TV  P N Y    L G+A+CCV+               P ++    +GH  
Sbjct: 1048 YRNMGRNEVTVELPPNWYKNDDLWGFALCCVYVA-------------PAYESQYELGHIS 1094

Query: 934  YGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEV 993
                  +  G          Y+    CY  +L +E +    +  H   SF      G +V
Sbjct: 1095 KDDAELEDEGPG------FCYMQWVICYP-KLAIEESYHTNQWTHFKASF-----GGAQV 1142

Query: 994  KMCGLHPVYMDEVEELDQTTNQPS 1017
            + CG+  VY ++ E+      Q S
Sbjct: 1143 EECGIRLVYTEDYEQKHPAMAQGS 1166


>gi|307135796|gb|ADN33675.1| TIR-NBS-LRR disease resistance protein [Cucumis melo subsp. melo]
          Length = 1393

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 337/932 (36%), Positives = 499/932 (53%), Gaps = 113/932 (12%)

Query: 10   FLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK-GGLVSL 68
            +  D+G   + M+GI G+GG+GKTT+A+ +Y+ I+ +FE   FL NVRE S +  GL  L
Sbjct: 222  YEFDTG---IYMVGIYGIGGIGKTTLAKALYNKIASQFEGCCFLSNVREASKQFNGLAQL 278

Query: 69   QRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGS 128
            Q  LL ++L + D  + N+  GI+++ +RL  KKVL+V+DDV  ++QL++L G  +WFG 
Sbjct: 279  QESLLYEIL-MVDLKVVNLDRGINIIRNRLCSKKVLIVLDDVDKLEQLEALVGGCDWFGK 337

Query: 129  GSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIR 188
            GSRII+T+R++HLL +HG DE++   GLN D+A++LF+  AFK  +P    + LS R   
Sbjct: 338  GSRIIVTTRNKHLLFSHGFDEIHNILGLNEDKAIELFSWHAFKKNRPSSNYLDLSKRATS 397

Query: 189  YAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLD 248
            Y  G PLAL VLGSFL  R   EW S L+  E     +I DILQ+SFDGL++  K IFLD
Sbjct: 398  YCKGHPLALVVLGSFLCIRDQAEWCSILDEFENSLNKDIKDILQLSFDGLEDKIKDIFLD 457

Query: 249  IACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQR 308
            I+C   G   +YV + L  C  +   G+ VL++  LIT+ N+ + MHDL++++GQ+IV  
Sbjct: 458  ISCLLVGEKVEYVKDMLGACHVNLDFGVIVLMDLSLITIENDKVQMHDLIKQMGQKIVCG 517

Query: 309  QSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNL 368
            +S  ELGKRSRLW  ++V  VL  ++GT+ ++ I LD     N   L  +++AF KM NL
Sbjct: 518  ESL-ELGKRSRLWLVQDVWEVLVNNSGTDAIKAIKLD---FPNPTRLGVNSQAFRKMKNL 573

Query: 369  RLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGI 428
            RLL + N +    +EYL + L+ + W G+P   LPS       + + + YS +    K +
Sbjct: 574  RLLIVQNARFSTKIEYLPDSLKWIKWHGFPQPTLPSCFITKNLVGLDLQYSFMKTFGKRL 633

Query: 429  KHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKD 488
            +   +LK + LSHS  L ++P+F+ A NLE+L L  C  L  I  S+   +KL ILN+  
Sbjct: 634  EDCKRLKHVDLSHSTFLEKIPNFSAASNLEELYLINCKNLGMIDKSVFSLDKLTILNLAG 693

Query: 489  CTSLITLP-GKILMKSLEKL---------------------------------------- 507
            C++L  LP G  +++SL  L                                        
Sbjct: 694  CSNLKKLPRGYFILRSLRYLNLSHCKKLEKIPDFSAASNLEELYLFNCTNLRMIDKSVFS 753

Query: 508  -------------NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT 554
                         NLK LPT+   L  L  L++S   K  + P++       S    E T
Sbjct: 754  LHKLTILNLDVCSNLKKLPTSYYKLWSLQYLNLSYCKKLEKIPDLSAASNLQSLCLHECT 813

Query: 555  AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
             +R +  S+  L  L+ ++L  C +L  LP T   LK LR L LS C KL+ FP I  +M
Sbjct: 814  NLRLIHESVGSLYKLIDMDLSGCTNLAKLP-TYLRLKSLRYLGLSECCKLESFPSIAENM 872

Query: 615  KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
            + L EL +D T+IKE+PSSI  LT+L  LNL+ C NL+ LP++I  L++L  L LSGC +
Sbjct: 873  ESLRELDMDFTAIKELPSSIGYLTQLYRLNLTGCTNLISLPNTIYLLRNLDKLLLSGCSR 932

Query: 675  LENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSL---SGLCS-L 730
             E  P    + +   +   S + +  +TSW             +L+ P L     LCS  
Sbjct: 933  FEMFPH---KWDPTIQPVCSPSKMMEATSW-------------SLEYPHLLPNESLCSHF 976

Query: 731  RKLNLTDCNLMEGALPSDIGNLCS-LKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRL 789
              L+L  CN+        + ++   L +L LS+N F SLP+ +     L N+EL++CK L
Sbjct: 977  TLLDLQSCNISNAKFLEILCDVAPFLSDLRLSENKFSSLPSCLHKFMSLWNLELKNCKFL 1036

Query: 790  QSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSML-RE 848
            Q +P LP NI+ +  +GC SL    D +            +D + +   + LA   + RE
Sbjct: 1037 QEIPNLPQNIQNLDASGCKSLARSPDNI------------MDIISI--KQDLAMDEISRE 1082

Query: 849  YLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGS 880
            +L             + G EIPEWF Y+   +
Sbjct: 1083 FL-------------LTGIEIPEWFSYKTASN 1101


>gi|296089445|emb|CBI39264.3| unnamed protein product [Vitis vinifera]
          Length = 1054

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 328/905 (36%), Positives = 463/905 (51%), Gaps = 148/905 (16%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-I 59
           MD   +K++ L+D+ S+ V M+GI G GG+GKTTIA+VVY+ +  +F+   FL+NVRE  
Sbjct: 100 MDENLKKVKLLIDAQSNKVSMVGIYGTGGIGKTTIAKVVYNDMLDQFKCHSFLENVREKY 159

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
             KG L+ LQ++LL  +L   +  + N+ +G   + S+   +KVL+V+DDV   +QL+ L
Sbjct: 160 EDKGDLLQLQKELLCDILMEKNLVLRNIDEGFKKIKSKRHSEKVLIVLDDVGCEEQLKFL 219

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           A N E F  GS II+T+R++  L  +     Y+   +   +A +LF   AFK   P++  
Sbjct: 220 APNSECFHPGSIIIVTTRNKRCLDVYDSYSSYEAKRMADKQAEELFCWNAFKQDHPIENF 279

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V LS RI+ YA GLPLAL VLGSFL  R +DEW STL+ L+  PP  I  +LQIS+DGL 
Sbjct: 280 VGLSNRILDYADGLPLALVVLGSFLFQRPMDEWESTLDELKTIPPENIQKVLQISYDGLS 339

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           +  KK+FL IACFFK  D    T  LE C  HP IG+RVL E+CLI++ +NT+ MHDLLQ
Sbjct: 340 DERKKLFLYIACFFKDEDEKMATRILESCKLHPAIGLRVLHERCLISIEDNTIRMHDLLQ 399

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G  IV    PE  GK SRL + +++  VL+++  T+ +EGI      H  + ++  + 
Sbjct: 400 EMGWAIVC-NDPERPGKWSRLCELQDIESVLSQNEWTKNIEGIFTSQSRHTGK-HIQLTT 457

Query: 360 KAFSKMTNLRLLKI---CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
           + F  M  LRLLK+     +QL    E   + L    W  YPL++LPSN   D  +E+ +
Sbjct: 458 EVFRNMNQLRLLKVEFNQIVQLSQDFELPCHDLVYFHWDYYPLEYLPSNFHTDNLVELNL 517

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             SRI  LW+G     KLKV+ LS+S +L+ +   +  PNLE L L+GCTR         
Sbjct: 518 WCSRIKHLWEGNMPAKKLKVIDLSYSMHLVDISSISSMPNLETLTLKGCTR--------- 568

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
                                           LKSLP     L+CL TL   G      F
Sbjct: 569 --------------------------------LKSLPRNFPKLECLQTLSCCGCSNLESF 596

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
           P+I E M  L +L+L  T I GLP SI  L+GL  L+L +C+ L  LP ++ +L  L++L
Sbjct: 597 PKIEEEMRSLRKLNLSQTGIMGLPSSISKLNGLKELDLSSCKKLSSLPDSIYSLSSLQTL 656

Query: 597 KLSGCSKLKKFPEI-VRSMKDLSELFLDGT-SIKEVPSSIEL------------------ 636
            L  CS+L  FP I + S+K L  L L    +++ +P+SI                    
Sbjct: 657 NLFACSRLVGFPGINIGSLKALKYLDLSWCENLESLPNSIGSLSSLQTLLLIGCSKLKGF 716

Query: 637 -------LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIE--- 686
                  L  LE L+ S C+NL  LP SI  + SLKTL ++ C KLE + E    ++   
Sbjct: 717 PDINFGSLKALESLDFSGCRNLESLPVSIYNVSSLKTLGITNCPKLEEMLEMKLGVDPCP 776

Query: 687 ---SLEELDISGTAVPHSTSWY----------SYIPI-NLMRKSV--------------- 717
              S     IS +A+     W+          S  P+ +L+  SV               
Sbjct: 777 WPFSPLTCHISNSAIIWDDHWHDCFSSLEALDSQCPLSSLVELSVRKFYDMEEDIPIGSS 836

Query: 718 ---ALKLPSLSG--------------LCSLRKLNLTDCNLMEGALPSDIGN--------- 751
              +L++ SL                L SL KL+LT C   E  +P DI N         
Sbjct: 837 HLTSLEILSLGNVPTVVEGILYDIFHLSSLVKLSLTKCKPTEEGIPRDIQNLSPLQQLSL 896

Query: 752 ----------------LCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQL 795
                           L SL+ELYL  N F S+P  I+ LS L  ++L  CK+LQ +P+L
Sbjct: 897 HDCNLMKGTILDHICHLTSLEELYLGWNHFSSIPAGISRLSNLKALDLSHCKKLQQIPEL 956

Query: 796 PPNIR 800
           P ++R
Sbjct: 957 PSSLR 961



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 137/314 (43%), Gaps = 35/314 (11%)

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
           E+  +M  L  L +E   I  L    EL    ++    +   LE LP   SN      ++
Sbjct: 458 EVFRNMNQLRLLKVEFNQIVQLSQDFELPCHDLVYFHWDYYPLEYLP---SNFHTDNLVE 514

Query: 598 LS-GCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPS 656
           L+  CS++K   E     K L  + L  +      SSI  +  LE L L  C  L  LP 
Sbjct: 515 LNLWCSRIKHLWEGNMPAKKLKVIDLSYSMHLVDISSISSMPNLETLTLKGCTRLKSLPR 574

Query: 657 SIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYIP-INL 712
           +   L+ L+TL+  GC  LE+ P+   ++ SL +L++S T +   P S S  + +  ++L
Sbjct: 575 NFPKLECLQTLSCCGCSNLESFPKIEEEMRSLRKLNLSQTGIMGLPSSISKLNGLKELDL 634

Query: 713 MRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVSLPT 770
                   LP S+  L SL+ LNL  C+ + G    +IG+L +LK L LS   +  SLP 
Sbjct: 635 SSCKKLSSLPDSIYSLSSLQTLNLFACSRLVGFPGINIGSLKALKYLDLSWCENLESLPN 694

Query: 771 SIT-------------------------HLSKLLNIELEDCKRLQSLPQLPPNIRQVRVN 805
           SI                           L  L +++   C+ L+SLP    N+  ++  
Sbjct: 695 SIGSLSSLQTLLLIGCSKLKGFPDINFGSLKALESLDFSGCRNLESLPVSIYNVSSLKTL 754

Query: 806 GCASLVTLLDALKL 819
           G  +   L + L++
Sbjct: 755 GITNCPKLEEMLEM 768


>gi|359493404|ref|XP_003634588.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1102

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 298/706 (42%), Positives = 431/706 (61%), Gaps = 43/706 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD R ++L+ L+ S  +D+R++GI G+GG+GKTTIA++VY+ I ++F  + FL +VRE  
Sbjct: 196 MDFRLKELKSLLSSDLNDIRVVGIYGIGGIGKTTIAKIVYNEIQYQFTGASFLQDVRETF 255

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +KG  + LQ+QLL  ++   D    N+  GI+++  RL  KKVL+VIDDV  ++QL+S+A
Sbjct: 256 NKGCQLQLQQQLLHDIVG-NDEKFSNINKGINIIKDRLGSKKVLIVIDDVDRLQQLESVA 314

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G+ +WFG GS IIIT+RD+HLL  +GV   +K   L+Y+EALQLF+  AFK   P ++ V
Sbjct: 315 GSPKWFGPGSTIIITTRDQHLLVEYGVTISHKATELHYEEALQLFSQHAFKQNVPKEDYV 374

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            LS  +++YA GLPLAL+VLGS L G ++DEW+S  ++ +  P  EI D+L+ISFDGL  
Sbjct: 375 DLSNCMVQYAQGLPLALKVLGSSLQGMTIDEWKSASDKSKKNPMKEINDVLRISFDGLDP 434

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            +K++FLDIACFFKG  +D+V+  L+GC       IRVL ++CL+T+ +N + MHDL+QE
Sbjct: 435 SQKEVFLDIACFFKGECKDFVSRILDGCNLFATCNIRVLRDRCLVTILDNVIQMHDLIQE 494

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G  IV+ + P +  K SRLW  +++    ++    + ++ I LD      E+    + K
Sbjct: 495 MGWAIVREECPGDPCKWSRLWDVDDIYDAFSKQEEMQNIQTISLD-LSRSREIQF--NTK 551

Query: 361 AFSKMTNLRLLKI-CN-----------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQM 408
            F KM  LRLLKI CN           + LP   E+  + LR L W+   L  LP N   
Sbjct: 552 VFPKMKKLRLLKIYCNDHDGLPREEYKVLLPKDFEF-PHDLRYLHWQRCTLTSLPWNFYG 610

Query: 409 DKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
              +EI +  S I +LWKG K L +LK + LS+S+ L++MP F+  PNLE+L LEGCTRL
Sbjct: 611 KHLLEINLKSSNIKQLWKGNKRLKELKGIDLSNSKQLVKMPKFSSMPNLERLNLEGCTRL 670

Query: 469 YEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVS 528
            E+H S+    +L  LN+++C                  NLKSLP +I GLK L  L ++
Sbjct: 671 RELHSSIGHLTRLDPLNLENCR-----------------NLKSLPNSICGLKSLEGLSLN 713

Query: 529 GDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS 588
           G      F EI E ME L  L L  T I  LP SIE + GL  L L NC +L  LP ++ 
Sbjct: 714 GCSNLEAFSEITEDMEQLERLFLRETGISELPSSIEHMRGLKSLELINCENLVALPNSIG 773

Query: 589 NLKCLRSLKLSGCSKLKKFPEIVRSMK-DLSELFLDGTSI--KEVPSSIELLTKLELLNL 645
           NL CL SL +  C KL   P+ +RS++  L+ L L G ++  +E+P+ +  L+ LE LN+
Sbjct: 774 NLTCLTSLHVRNCPKLHNLPDNLRSLQCCLTMLDLGGCNLMEEEIPNDLWCLSSLEFLNV 833

Query: 646 SDCKNLVR-LPSSIIALKSLKTLNLSGCFKLE---NVPETLGQIES 687
           S+  N +R +P+ I  L  L TL ++ C  LE    +P +LG IE+
Sbjct: 834 SE--NHMRCIPAGITQLCKLGTLLMNHCPMLEVIGELPSSLGWIEA 877



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 153/550 (27%), Positives = 231/550 (42%), Gaps = 111/550 (20%)

Query: 536  FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
             P+  E    L  LH +   +  LP +      L+ +NLK+  +++ L      LK L+ 
Sbjct: 581  LPKDFEFPHDLRYLHWQRCTLTSLPWNF-YGKHLLEINLKS-SNIKQLWKGNKRLKELKG 638

Query: 596  LKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRL 654
            + LS   +L K P+   SM +L  L L+G T ++E+ SSI  LT+L+ LNL +C+NL  L
Sbjct: 639  IDLSNSKQLVKMPKF-SSMPNLERLNLEGCTRLRELHSSIGHLTRLDPLNLENCRNLKSL 697

Query: 655  PSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMR 714
            P+SI  LKSL+ L+L+GC  LE   E    +E LE L +  T +    S      I  MR
Sbjct: 698  PNSICGLKSLEGLSLNGCSNLEAFSEITEDMEQLERLFLRETGISELPS-----SIEHMR 752

Query: 715  KSVALKL---------------------------PSLSGL--------CSLRKLNLTDCN 739
               +L+L                           P L  L        C L  L+L  CN
Sbjct: 753  GLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSLQCCLTMLDLGGCN 812

Query: 740  LMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
            LME  +P+D+  L SL+ L +S+N    +P  IT L KL  + +  C  L+ + +LP ++
Sbjct: 813  LMEEEIPNDLWCLSSLEFLNVSENHMRCIPAGITQLCKLGTLLMNHCPMLEVIGELPSSL 872

Query: 800  RQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQH 859
              +  +GC SL T                           S +           S  ++ 
Sbjct: 873  GWIEAHGCPSLET-------------------------ETSSSLLWSSLLKHLKSPIQRR 907

Query: 860  LSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHV-LKNSRGNNCF 917
            L++++PGS  IPEW  +Q  G  ++V  P N Y    L+   +    HV L +       
Sbjct: 908  LNIIIPGSSGIPEWVSHQRMGCEVSVELPMNWYEDNNLLLGFVLFFHHVPLDDDECVRTS 967

Query: 918  GSYPTHQLNCHIGHG-------------------IYGIGFRDKFGQAGSDH---LWLLYL 955
            G  P  +L   I HG                   I G+ +  +   +GS     LW+ Y 
Sbjct: 968  GFIPECKL--AISHGDQTERLDNISFYHRCKTYSISGLSYSSRRYDSGSTSDPALWVTYF 1025

Query: 956  SRQTCYDIRLPLE------SNLEPFESNHV-NVSFEPWLGQGLEVKMCGLHPVYMDEVEE 1008
             +     IR+P +      +N +    N V N SF        +VK CG+H +Y  + + 
Sbjct: 1026 PQ-----IRIPSKYRSRKWNNFKAHFDNPVGNASFTCGENASFKVKSCGIHLIYAQDQKH 1080

Query: 1009 LDQTTNQPSR 1018
                  QPSR
Sbjct: 1081 WP----QPSR 1086


>gi|399920225|gb|AFP55572.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1076

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 316/788 (40%), Positives = 452/788 (57%), Gaps = 62/788 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD++ E++  L+D  ++DVR IGI GMGG+GKTT+ R+VY+ ISH+FE   FL NVRE S
Sbjct: 199 MDAKLEEIDVLLDKEANDVRFIGIWGMGGIGKTTLGRLVYEKISHQFEVCIFLANVREAS 258

Query: 61  -SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            +  GLV LQ+Q+LSQ+LK  +  +WNV+ GI M+   +  K VLLV+DDV   +QL  L
Sbjct: 259 KTTHGLVDLQKQILSQILKEENVQVWNVYSGITMIKRCVCNKAVLLVLDDVDQSEQLAIL 318

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G ++ FG  SRIIIT+R+ H+L THGV++ Y+  GLN DEALQLF+ KAF   +P ++ 
Sbjct: 319 VGEKDCFGLRSRIIITTRNRHVLVTHGVEKPYELKGLNEDEALQLFSWKAFTKCEPEEDY 378

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            +L  R +  A GLPLAL++LGSFL  RS+D W S  ++L+  P   + +IL+ISFDGL 
Sbjct: 379 AELCKRFVTCAAGLPLALKILGSFLYKRSLDSWSSAFQKLKQTPNPTVFEILKISFDGLD 438

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLL 298
           E+EKKIFLDIACF +    +++   ++       I   VL EK L+T+  +N + +HDL+
Sbjct: 439 EMEKKIFLDIACFRRLYRNEFMIELVDSSDPCNRITRSVLAEKSLLTISSDNQVDVHDLI 498

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
            E+G +IV RQ  +E G RSRL   + + HV T++TGTE +EGI+L     E   +   +
Sbjct: 499 HEMGCEIV-RQENKEPGGRSRLCLRDHIFHVFTKNTGTEAIEGILLHLDKLEEADW---N 554

Query: 359 AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
            + FSKM  L+LL I NL+L  G ++L N LR L W  YP K LP   Q D+  E+ + +
Sbjct: 555 LETFSKMCKLKLLYIHNLRLSVGPKFLPNALRFLNWSWYPSKSLPPCFQPDELTELSLVH 614

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           S I  LW G K+L  LK + LS+S NL R PDFT  PNLEKL+LEGCT L +IHPS+ L 
Sbjct: 615 SNIDHLWNGKKYLRNLKSIDLSYSINLTRTPDFTVFPNLEKLVLEGCTNLVKIHPSIALL 674

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLK 532
            +L + N ++C S+ +LP ++ M+ LE  +      LK +P  +   K LS L + G   
Sbjct: 675 KRLKLCNFRNCKSIKSLPSELNMEFLETFDISGCSKLKKIPEFVGQTKRLSKLCLGGT-A 733

Query: 533 FREFPEIVEHM-EHLSELHLEGTAIRGLPLSIEL-----LSGLVLLNLKNCRSLEILPVT 586
             + P  +EH+ E L EL L G  IR  P S+       +S   L   K+   L  L  +
Sbjct: 734 VEKLPSSIEHLSESLVELDLSGIVIREQPHSLFFKQNFRVSSFGLFPRKSPHPLIPLLAS 793

Query: 587 VSNLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNL 645
           +     L  LKL+ C+  + + P  + S+  L +L L G +   +P+SI LL+KLE++ +
Sbjct: 794 LKQFSSLTELKLNDCNLCEGEIPNDIGSLSSLRKLELRGNNFVSLPASIHLLSKLEVITV 853

Query: 646 SDCKNLVRLP----SSIIALKSLKTLNLSGCFKLENVPET-----LGQIE-------SLE 689
            +C  L +LP    S  I +K+        C  L+  P+      +G  E       SLE
Sbjct: 854 ENCTRLQQLPELPASDYILVKT------DNCTSLQVFPDPPDLCRIGNFELTCMNCSSLE 907

Query: 690 ---------ELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNL 740
                    E  I G  +P    W++   +     SV  KLP  S  C+ + +    C L
Sbjct: 908 THRRSLECLEFVIPGREIPE---WFNNQSVG---DSVTEKLP--SDACNSKCIGFAVCAL 959

Query: 741 MEGALPSD 748
           +   +P D
Sbjct: 960 I---VPQD 964



 Score =  192 bits (488), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 157/469 (33%), Positives = 230/469 (49%), Gaps = 72/469 (15%)

Query: 590  LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDC 648
            L+ L+S+ LS    L + P+      +L +L L+G T++ ++  SI LL +L+L N  +C
Sbjct: 627  LRNLKSIDLSYSINLTRTPDFT-VFPNLEKLVLEGCTNLVKIHPSIALLKRLKLCNFRNC 685

Query: 649  KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI----------------------- 685
            K++  LPS +  ++ L+T ++SGC KL+ +PE +GQ                        
Sbjct: 686  KSIKSLPSEL-NMEFLETFDISGCSKLKKIPEFVGQTKRLSKLCLGGTAVEKLPSSIEHL 744

Query: 686  -ESLEELDISGTAV---PHSTSWYSYIPIN----LMRKSVALKLP---SLSGLCSLRKLN 734
             ESL ELD+SG  +   PHS  +     ++      RKS    +P   SL    SL +L 
Sbjct: 745  SESLVELDLSGIVIREQPHSLFFKQNFRVSSFGLFPRKSPHPLIPLLASLKQFSSLTELK 804

Query: 735  LTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ 794
            L DCNL EG +P+DIG+L SL++L L  N+FVSLP SI  LSKL  I +E+C RLQ LP+
Sbjct: 805  LNDCNLCEGEIPNDIGSLSSLRKLELRGNNFVSLPASIHLLSKLEVITVENCTRLQQLPE 864

Query: 795  LPP-NIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAV 853
            LP  +   V+ + C SL    D   LC+  +  + C++                  LE  
Sbjct: 865  LPASDYILVKTDNCTSLQVFPDPPDLCRIGNFELTCMNC---------------SSLETH 909

Query: 854  SNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRG 913
              + + L  V+PG EIPEWF  Q+ G S+T   PS+  N  K +G+A+C +     N   
Sbjct: 910  RRSLECLEFVIPGREIPEWFNNQSVGDSVTEKLPSDACN-SKCIGFAVCALIVPQDNPSA 968

Query: 914  --NNCFGSYPTHQLNCHI-GHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESN 970
               N      T ++ CH   +G+Y +    +  Q  SDHLWL  L       +   LE  
Sbjct: 969  FPENPLLDPDTCRIGCHWNNYGVYSLCQNFRVRQFVSDHLWLFVLR-----SLFWKLEKR 1023

Query: 971  LEPFESNHVNVSFEPWLGQG----LEVKMCGLHPVYMDEVEELDQTTNQ 1015
            LE      VN  F+     G    ++VK CG+  +Y  + EEL    NQ
Sbjct: 1024 LE------VNFVFKITRAVGNNRCIKVKKCGVRALYEYDKEELISKMNQ 1066


>gi|399920209|gb|AFP55556.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1117

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 288/668 (43%), Positives = 406/668 (60%), Gaps = 39/668 (5%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD++ E++  L+D  ++DVR IGI GMGG+GKTT+A++VY+ ISH+FE   FL NVRE+S
Sbjct: 199 MDTKLEEIDVLLDKEANDVRFIGIWGMGGIGKTTLAQLVYEKISHQFEVCIFLANVREVS 258

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +  GLV LQ+Q+LSQ++K  +  +WNV++G +M+   L  K+VLLV+DDV   +QL++L 
Sbjct: 259 ATRGLVHLQKQILSQIMKKENVKVWNVYNGNNMIKRCLCNKEVLLVLDDVDQSEQLENLV 318

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G ++WF                     ++ YK  GLN +EALQLF+ KAF+ ++P ++  
Sbjct: 319 GEKDWF---------------------EKPYKLKGLNENEALQLFSWKAFRKHEPEEDYA 357

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           + S   ++YAGGLPLAL+ LGSFL+GRS DEW S L +L   P   +  IL+ISFDGL E
Sbjct: 358 EQSKSFVKYAGGLPLALKTLGSFLNGRSPDEWNSALAKLHQTPNITVFKILKISFDGLDE 417

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQ 299
           +EKKIFLDIACF +    +++   ++       I  RVL EK L+T+  +N + +HDL+ 
Sbjct: 418 MEKKIFLDIACFRRLYRNEFMIELVDSSDPCNHITRRVLAEKSLLTISSDNQVDVHDLIH 477

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+  +IV RQ  EE G RSRL     + HV T++TGTE +EGI+LD    E   +   + 
Sbjct: 478 EMACEIV-RQENEEPGGRSRLCLRNNIFHVFTQNTGTEAIEGILLDLAELEEADW---NL 533

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           +AFSKM  L+LL I NL+L  G ++L N LR L W  YP K LP   Q D+ +E+ + YS
Sbjct: 534 EAFSKMCKLKLLYIHNLRLSVGPKFLPNALRFLNWSWYPSKSLPPCFQPDELVELSLPYS 593

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
           +I  LW G K LD LK + LS+S NL R PDFTG PNLEKLILEGCT L +IHPS+ L  
Sbjct: 594 KIDHLWNGKKCLDNLKSIDLSYSINLTRTPDFTGIPNLEKLILEGCTNLVDIHPSIALLK 653

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKF 533
           +L I N+++C S+ +LP ++ M+ LE L+      LK +P  +   K LS L +SG    
Sbjct: 654 RLKIWNLRNCQSIKSLPSEVYMEFLETLDVTGCSKLKMIPKFMQKTKRLSKLSLSG-TAV 712

Query: 534 REFPEIVEHMEHLSELHLEGTAIRGLPLSIEL-----LSGLVLLNLKNCRSLEILPVTVS 588
            + P I +  E L EL L G   R  P S+ L     +S   L   K+   L  L  ++ 
Sbjct: 713 EKLPSIEQLSESLVELDLSGVVRRERPYSLFLQQILGVSSFGLFPRKSPHPLIPLLASLK 772

Query: 589 NLKCLRSLKLSGCS-KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
           +   L  L L+ C+    + P  + S+  L  L L G +   +P+SI LL+KL   N+ +
Sbjct: 773 HFSSLTELYLNDCNLSEGELPNDIGSLSSLVRLELRGNNFVSLPASIHLLSKLRRFNVEN 832

Query: 648 CKNLVRLP 655
           CK L +LP
Sbjct: 833 CKRLQQLP 840



 Score =  176 bits (446), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 167/538 (31%), Positives = 261/538 (48%), Gaps = 96/538 (17%)

Query: 590  LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDC 648
            L  L+S+ LS    L + P+    + +L +L L+G T++ ++  SI LL +L++ NL +C
Sbjct: 605  LDNLKSIDLSYSINLTRTPDFT-GIPNLEKLILEGCTNLVDIHPSIALLKRLKIWNLRNC 663

Query: 649  KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---------- 698
            +++  LPS +  ++ L+TL+++GC KL+ +P+ + + + L +L +SGTAV          
Sbjct: 664  QSIKSLPSEVY-MEFLETLDVTGCSKLKMIPKFMQKTKRLSKLSLSGTAVEKLPSIEQLS 722

Query: 699  ----------------PHSTSWYSYIPIN----LMRKSVALKLP---SLSGLCSLRKLNL 735
                            P+S      + ++      RKS    +P   SL    SL +L L
Sbjct: 723  ESLVELDLSGVVRRERPYSLFLQQILGVSSFGLFPRKSPHPLIPLLASLKHFSSLTELYL 782

Query: 736  TDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQL 795
             DCNL EG LP+DIG+L SL  L L  N+FVSLP SI  LSKL    +E+CKRLQ LP+L
Sbjct: 783  NDCNLSEGELPNDIGSLSSLVRLELRGNNFVSLPASIHLLSKLRRFNVENCKRLQQLPEL 842

Query: 796  PPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLA---FSMLREYLEA 852
              N    R + C SL      +    +    + C++ L ++GN+ ++   +S+L+ ++E 
Sbjct: 843  WANDVLSRTDNCTSLQLFFGRI----TTHFWLNCVNCLSMVGNQDVSYLLYSVLKRWIEI 898

Query: 853  VSNTR---------------QHLSVVVPGSEIPEWFMYQNEGSSITVT-RPSNLYNKKKL 896
               +R               ++L  V+PGSEIPEWF  Q+ G  +T    P +  N  K 
Sbjct: 899  QVLSRCDMTVHMQETHRRPLEYLDFVIPGSEIPEWFNNQSVGDRVTEKLLPWDACN-SKW 957

Query: 897  VGYAICCVFHVLKNSRG--NNCFGSYPTHQLNC---HIGHGIYGIGFRDKFGQAGSDHLW 951
            +G+A+C +     N      +      T  ++C   + G  + G+G   K  Q  SDHL 
Sbjct: 958  IGFAVCALIVPQDNPSAVPEDPLLDPDTCLISCNWNYYGTKLGGVGICVK--QFVSDHLS 1015

Query: 952  LLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLG--QGLEVKMCGLHPVYMDEVEEL 1009
            L+ L          PL +     E+N V   F   +G  + ++VK CG+  +Y D+ EEL
Sbjct: 1016 LVVLPS--------PLRTPENCLEANFV-FKFIRAVGSKRCMKVKKCGVRALYGDDREEL 1066

Query: 1010 DQTTNQ--PSRFTVY--NLNEFDQHFVGSKMIVATTSKRSLTEYFGAEASGSGCCDDE 1063
                NQ   S  ++Y   ++E D   V +K   AT              SGSG  DDE
Sbjct: 1067 ISKMNQSKSSSISLYEEGMDEQDGAMVKAKQEAAT--------------SGSGGSDDE 1110


>gi|359493556|ref|XP_003634626.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1148

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 336/1045 (32%), Positives = 530/1045 (50%), Gaps = 159/1045 (15%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MDSR  ++   +D    DVR+IGICG+GG+GKTTIA+V+Y+   ++FE + FL+N+ EIS
Sbjct: 178  MDSRAREISLRLDLELDDVRIIGICGIGGIGKTTIAKVIYNQFFYQFEHTSFLENISEIS 237

Query: 61   SKGGLVSLQRQLLSQLLKLADN-SIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
               GL+ LQ QLL  +L++ +N  I  +  G +M+ + L+ K+V +V+DDV D  QL+SL
Sbjct: 238  KNQGLLHLQNQLLCNILEVEENIYISAIGQGSNMIKNILRSKRVFIVLDDVDDSNQLESL 297

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
             GN +W G+GSR+IIT+R++HLL    VDE+Y+   L +++  +LFN  AF+   P Q+ 
Sbjct: 298  VGNHDWLGNGSRVIITTRNKHLLTVQRVDELYEVEKLKFEDGYELFNWHAFRQNIPKQDF 357

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            + LS   + Y  GLPLAL++LGS L  ++  +W+S L++L+ EP  +I +IL+ SF GL 
Sbjct: 358  INLSYDAVCYCQGLPLALKILGSLLIDKTRPQWKSELKKLKREPDKKIHNILKRSFHGLD 417

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
              +K IFLDIAC FKG  R++V+  L+GC F+   G++ L +KCLIT+ NN + MHDL+Q
Sbjct: 418  HTQKDIFLDIACCFKGKKRNFVSRILDGCNFYVERGLKDLSDKCLITILNNWINMHDLIQ 477

Query: 300  ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
            ++G +I++ + P E  K SRLW  E++      S   + +E + LD    +   +   + 
Sbjct: 478  QMGWEIIRGKFPNEPSKWSRLWDPEDIERAFATSEAMKKMEAVFLDLSRLKQMQF---NT 534

Query: 360  KAFSKMTNLRLLKI--------------------CNLQLPNGLEYLSNRLRLLGWRGYPL 399
            K  SKM  LRLLK+                      L LP   E+ S  LR L W  Y L
Sbjct: 535  KVLSKMNKLRLLKVYWRRHYGHVRKDYKLTLPENFKLILPENFEFPSYELRYLYWERYSL 594

Query: 400  KFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEK 459
            K LPSN + +  ++I +  S I +LW+G K L KLKV+ LS S+ LI +P+F+   NLEK
Sbjct: 595  KSLPSNFKGENLVKIKLPNSNIRQLWQGNKCLGKLKVLDLSDSKQLIELPNFSNISNLEK 654

Query: 460  LILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGL 519
            LIL  C  L +I  S+ +   L +L++  C  L                  SLP+ +  L
Sbjct: 655  LILHNCRSLDKIDSSIEVLKNLNVLDLSWCKKLT-----------------SLPSGMQYL 697

Query: 520  KCLSTLDVSGDLKFREFPEI-VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCR 578
              L  L+++G     +FP+I     + L E+ L+GT I+ LP SI+ L+ + +L++ +C+
Sbjct: 698  DSLEILNLNGCSNLEKFPKIRWSFRKGLKEIRLDGTPIKELPFSIDDLTLVKILSMGDCK 757

Query: 579  SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLT 638
            ++  L  ++ +LK L+ L L GCS L+ FPEI   M  L  L L  T+IKE+P +I+ L 
Sbjct: 758  NVRSLLSSIGSLKSLQLLYLQGCSNLETFPEITEDMASLELLSLSETAIKELPPTIQHLK 817

Query: 639  KLELLNLSDCKNLVRLPSSIIALK-SLKTLNLSGCFKLENVPETLGQIESLEELDISGTA 697
            +L LL +  C  L + P  + +LK SL  L+LS                     ++   A
Sbjct: 818  QLRLLFVGGCSRLEKFPKILESLKDSLINLDLSN-------------------RNLMDGA 858

Query: 698  VPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKE 757
            +P+     S + I  +R++    +P  + +  LRKL L                      
Sbjct: 859  IPNEIWCLSLLEILNLRRNNFRHIP--AAITQLRKLTL---------------------- 894

Query: 758  LYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDAL 817
                                   +++  CK LQ  P++P +++ +  + C SL TL  + 
Sbjct: 895  -----------------------LKISHCKMLQGFPEVPLSLKHIEAHDCTSLETL--SS 929

Query: 818  KLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSE-IPEWFMYQ 876
               K  S+++    S K   +++                 +   +++PGS  IP W ++Q
Sbjct: 930  PSSKLWSSLLQWFKSAKFQDHEAQP---------------KCAGIMIPGSSGIPGWVLHQ 974

Query: 877  NEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGI 936
                 + +  P N       +G+ + C++        +N    Y ++ L  H     Y  
Sbjct: 975  EMEREVRIELPMNWCKDNHFLGFVLFCLYQ-------DNGTDPYLSYDLRLHDDEDSYEA 1027

Query: 937  GFRDKFG----------QAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESN---HVNVSF 983
              R  FG              D LW+ Y  +     I +P     E + SN   H+  SF
Sbjct: 1028 VRRGWFGCQCDYYPNIYSGVLDELWVTYHPK-----ISIP-----EKYHSNQFKHIQTSF 1077

Query: 984  EPWLGQGLEVKMCGLHPVYMDEVEE 1008
               L  G+ +K CG+H +Y  + ++
Sbjct: 1078 SA-LTVGV-IKSCGIHLIYSQDHQQ 1100


>gi|147841678|emb|CAN73064.1| hypothetical protein VITISV_003258 [Vitis vinifera]
          Length = 1567

 Score =  457 bits (1177), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 275/659 (41%), Positives = 391/659 (59%), Gaps = 58/659 (8%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EKL+ LM++  + VR+IGICG GG+GKTTIA+ +Y+ IS +++ S FL N+RE  SKG +
Sbjct: 191 EKLKSLMNTELNKVRVIGICGTGGVGKTTIAKAIYNEISCQYDGSSFLKNMRE-RSKGDI 249

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
           + LQ++LL  +L+     I NV +GI M+   L   +VL++  DV ++KQL+ LA  ++W
Sbjct: 250 LQLQQELLHGILRGKFFKINNVDEGISMIKRCLSSNRVLIIFYDVDELKQLEYLAEEKDW 309

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSAR 185
           F + S IIITSRD+H+L  +GVD  Y+   LN +EA++LF++ AFK   P +    LS  
Sbjct: 310 FQAKSTIIITSRDKHVLARYGVDIPYEVSKLNKEEAIELFSLWAFKQNHPKKVYKNLSYN 369

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           II YA GLPLAL+VLG+ L G+ + EW S L +L+I P  EI ++L+ISFDGL +++K I
Sbjct: 370 IIDYANGLPLALKVLGASLFGKKISEWESALCKLKIIPHMEIHNVLRISFDGLDDIDKGI 429

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQI 305
           FLD+ACFFKG+D+D+V+  L   G H   GI  L ++CLITV  N L MHDL+Q++G +I
Sbjct: 430 FLDVACFFKGDDKDFVSRIL---GAHAKHGITTLDDRCLITVSKNMLDMHDLIQQMGWEI 486

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKM 365
           ++++ P++ G+RSRLW +    HVL  +TGT  +EG+ LD     N  +L  + ++F +M
Sbjct: 487 IRQECPKDPGRRSRLW-DSNAYHVLMRNTGTRAIEGLFLDRCKF-NPSHL--TTESFKEM 542

Query: 366 TNLRLLKICNLQ--------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
             LRLLKI N +        LP   E+ S  LR L W GYPLK LP N      +E+ + 
Sbjct: 543 NKLRLLKIHNPRRKLFLENHLPRDFEFSSYELRYLHWDGYPLKSLPMNFHAKNLVELSLR 602

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
            S I ++WKG K  DKL+V+ LSHS +LIR+P F+  PNLE L LEGC            
Sbjct: 603 DSNIKQVWKGNKLHDKLRVIDLSHSVHLIRIPGFSSVPNLEILTLEGC------------ 650

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
                                        ++L+ LP  I   K L TL  +G  K   FP
Sbjct: 651 -----------------------------VSLELLPRGIYKWKHLQTLSCNGCSKLERFP 681

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
           EI  +M  L  L L GTAI  LP SI  L+GL  L L+ C  L  +P  + +L  L+ L 
Sbjct: 682 EIKGNMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLEECSKLHKIPSYICHLSSLKVLN 741

Query: 598 LSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           L  C+ ++   P  +  +  L +L L+G     +P +I  L++L+ LNLS C NL ++P
Sbjct: 742 LGHCNMMEGGIPSDICYLSSLQKLNLEGGHFSSIPPTINQLSRLKALNLSHCNNLEQIP 800



 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 148/470 (31%), Positives = 219/470 (46%), Gaps = 87/470 (18%)

Query: 563  IELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL 622
            IE  S L  L L++CR+L  LP ++   K L +L  SGCS+L+ FPEI++ M+ L +LFL
Sbjct: 1092 IENPSELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLFL 1151

Query: 623  DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
            DGT+IKE+PSSI+ L  L+ L L   KNLV LP SI  L S KTL +  C   + +P+ L
Sbjct: 1152 DGTAIKEIPSSIQRLRVLQYLLLRS-KNLVNLPESICNLTSFKTLVVESCPNFKKLPDNL 1210

Query: 683  GQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLME 742
            G+++SL  L +               P++    S+  +LPSLSGLCSLR LNL  CNL  
Sbjct: 1211 GRLQSLLHLSVG--------------PLD----SMNFQLPSLSGLCSLRALNLQGCNLKG 1252

Query: 743  GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
             +                  N F  +P  I+ L  L +++L  CK LQ +P+LP  +  +
Sbjct: 1253 IS----------------QGNHFSRIPDGISQLYNLEDLDLGHCKMLQHIPELPSGLWCL 1296

Query: 803  RVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSV 862
              + C SL  L     L    S++  C  S      + + F   RE+       R  +  
Sbjct: 1297 DAHHCTSLENLSSQSNLLW--SSLFKCFKSQI----QRVIFVQQREF-------RGRVKT 1343

Query: 863  VVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLK-NSRGNNCFGSYP 921
             +    IPEW  +Q  G  IT+  P + Y     +G+ +C ++  L+  ++   CF    
Sbjct: 1344 FIAEFGIPEWISHQKSGFKITMKLPWSWYENDDFLGFVLCFLYVPLEIETKTPWCF---- 1399

Query: 922  THQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQ---TCYD---------IRLPLES 969
                NC        + F D       D  +  Y S Q    CYD         +  P   
Sbjct: 1400 ----NC-------KLNFDD-------DSAYFSYQSDQFCEFCYDEDASSQGCLMYYPKSR 1441

Query: 970  NLEPFESNH---VNVSFEPWLG-QGLEVKMCGLHPVYMDEVEELDQTTNQ 1015
              + + SN    +N SF  + G + ++V  CG H +Y  + E+ + T  Q
Sbjct: 1442 IPKSYHSNEWRTLNASFNVYFGVKPVKVARCGFHFLYAHDYEQNNLTIVQ 1491



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 170/366 (46%), Gaps = 45/366 (12%)

Query: 546 LSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
           L  LH +G  ++ LP++      LV L+L++    ++      + K LR + LS    L 
Sbjct: 574 LRYLHWDGYPLKSLPMNFHA-KNLVELSLRDSNIKQVWKGNKLHDK-LRVIDLSHSVHLI 631

Query: 606 KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLK 665
           + P                     VP+       LE+L L  C +L  LP  I   K L+
Sbjct: 632 RIP-----------------GFSSVPN-------LEILTLEGCVSLELLPRGIYKWKHLQ 667

Query: 666 TLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYIPINLMRKSVAL-KL 721
           TL+ +GC KLE  PE  G +  L  LD+SGTA+   P S +  + +   L+ +   L K+
Sbjct: 668 TLSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLEECSKLHKI 727

Query: 722 PS-LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLN 780
           PS +  L SL+ LNL  CN+MEG +PSDI  L SL++L L    F S+P +I  LS+L  
Sbjct: 728 PSYICHLSSLKVLNLGHCNMMEGGIPSDICYLSSLQKLNLEGGHFSSIPPTINQLSRLKA 787

Query: 781 IELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKS 840
           + L  C  L+ +P+LP  +R +  +G     +      L     +++ C          S
Sbjct: 788 LNLSHCNNLEQIPELPSRLRLLDAHGSNRTSSRAPYFPL----HSLVNCF---------S 834

Query: 841 LAFSMLREYLEAVSNTRQHLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGY 899
            A    R      S   +   +V+PGS+ IPEW M +          P N +   + +G+
Sbjct: 835 WAQDSKRTSFSDSSYHGKGTCIVLPGSDGIPEWIMDRENIHFAEAELPQNWHQNNEFLGF 894

Query: 900 AICCVF 905
           AICCV+
Sbjct: 895 AICCVY 900



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 102/184 (55%), Gaps = 14/184 (7%)

Query: 508  NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
            NL SLP++I G K L+TL  SG  +   FPEI++ ME L +L L+GTAI+ +P SI+ L 
Sbjct: 1108 NLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLFLDGTAIKEIPSSIQRLR 1167

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF---LDG 624
             L  L L++ ++L  LP ++ NL   ++L +  C   KK P+ +  ++ L  L    LD 
Sbjct: 1168 VLQYLLLRS-KNLVNLPESICNLTSFKTLVVESCPNFKKLPDNLGRLQSLLHLSVGPLDS 1226

Query: 625  TSIKEVPSSIELLTKLELLNLSDC--------KNLVRLPSSIIALKSLKTLNLSGCFKLE 676
             +  ++P S+  L  L  LNL  C         +  R+P  I  L +L+ L+L  C  L+
Sbjct: 1227 MNF-QLP-SLSGLCSLRALNLQGCNLKGISQGNHFSRIPDGISQLYNLEDLDLGHCKMLQ 1284

Query: 677  NVPE 680
            ++PE
Sbjct: 1285 HIPE 1288


>gi|359493349|ref|XP_002277814.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1260

 Score =  457 bits (1177), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 276/672 (41%), Positives = 393/672 (58%), Gaps = 57/672 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DS   +L  L+   S DVRM+GI GMGG+GKTT+AR +Y+ IS +FE   FL NV  ++
Sbjct: 199 VDSCIRELESLLCLPSMDVRMVGIWGMGGIGKTTLARAIYEQISGQFEGCCFLPNVEHLA 258

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           SKG    L+++LLS++L+       N+   I  + +R   KKVL+VID+V     L++L 
Sbjct: 259 SKGDDY-LRKELLSKVLRDK-----NIDVTITSVKARFHSKKVLIVIDNVNHRSILKTLV 312

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G  +WFG  SRIIIT+RD+H+L  HGVD +Y+   L  D+A++LFN  AF  + P ++ +
Sbjct: 313 GELDWFGPQSRIIITTRDKHVLTMHGVDVIYEVQKLQDDKAIELFNHHAFINHPPTEDVM 372

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS R+I YA GLPLALEVLGS L  +S DEW   L +LE  P  EI  +LQ SFD L +
Sbjct: 373 ELSQRVIAYAQGLPLALEVLGSSLCKKSKDEWECALNKLEKIPDMEIRKVLQTSFDELDD 432

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            +K IFLDIA FF   + D+ T  L   GF  + GIR LI+K LI   ++ L MHDLL E
Sbjct: 433 DQKNIFLDIAIFFNEVEEDFTTEMLNSFGFSAISGIRTLIDKSLIGNLDDELHMHDLLIE 492

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G++IV+R SP+E GKR+RLW+++++CHVL ++TGT+ VE I   +++      +C + +
Sbjct: 493 MGKEIVRRTSPKEPGKRTRLWEQQDICHVLEKNTGTDEVEVI---DFNLSGLKEICFTTE 549

Query: 361 AFSKMTNLRLLKI-----------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLP 403
           AF  M+ LRLL I                 C + + +  ++  + LR L W  YPLK LP
Sbjct: 550 AFGNMSKLRLLAIHESSLSDDSECSSRLMQCQVHISDDFKFHYDELRFLLWEEYPLKSLP 609

Query: 404 SNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
           S+ +    + + M  S +  LW+G K    LK + LS S+ L   PDF+   NL+ L  E
Sbjct: 610 SDFKSQNLVYLSMTKSHLTRLWEGNKVFKNLKYIDLSDSKYLAETPDFSRVTNLKMLSFE 669

Query: 464 GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLS 523
           GCT+L++IH SL   +KL  LN K+C +L   PG   + SLE LNL              
Sbjct: 670 GCTQLHKIHSSLGDLDKLCRLNFKNCINLEHFPGLDQLVSLEALNL-------------- 715

Query: 524 TLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEIL 583
               SG  K  +FP I + M  LS+L  +GTAI  LP SI   + LV+L+L+NC  L  L
Sbjct: 716 ----SGCSKLEKFPVISQPMHCLSKLCFDGTAITELPSSIAYATKLVVLDLQNCEKLLSL 771

Query: 584 PVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELL 643
           P ++  L  L +L LSGCS+L K P++            +  ++  +P  ++ L+ L  L
Sbjct: 772 PSSICKLAHLETLSLSGCSRLGK-PQV------------NSDNLDALPRILDRLSHLREL 818

Query: 644 NLSDCKNLVRLP 655
            L DC++L  LP
Sbjct: 819 QLQDCRSLRALP 830



 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 196/458 (42%), Gaps = 56/458 (12%)

Query: 527  VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVT 586
            +S D KF        H + L  L  E   ++ LP   +    LV L++     L  L   
Sbjct: 584  ISDDFKF--------HYDELRFLLWEEYPLKSLPSDFKS-QNLVYLSMTKSH-LTRLWEG 633

Query: 587  VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNL 645
                K L+ + LS    L + P+  R + +L  L  +G T + ++ SS+  L KL  LN 
Sbjct: 634  NKVFKNLKYIDLSDSKYLAETPDFSR-VTNLKMLSFEGCTQLHKIHSSLGDLDKLCRLNF 692

Query: 646  SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWY 705
             +C NL   P  +  L SL+ LNLSGC KLE  P     +  L +L   GTA+    S  
Sbjct: 693  KNCINLEHFPG-LDQLVSLEALNLSGCSKLEKFPVISQPMHCLSKLCFDGTAITELPSSI 751

Query: 706  SY----IPINLMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
            +Y    + ++L      L LP S+  L  L  L+L+ C+               L +  +
Sbjct: 752  AYATKLVVLDLQNCEKLLSLPSSICKLAHLETLSLSGCS--------------RLGKPQV 797

Query: 761  SKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRV-NGCASLVTLL-DALK 818
            + ++  +LP  +  LS L  ++L+DC+ L++LP LP ++  +   + C SL  +   ++ 
Sbjct: 798  NSDNLDALPRILDRLSHLRELQLQDCRSLRALPPLPSSMELINASDNCTSLEYISPQSVF 857

Query: 819  LCKSDSTMIACLDSLKL-------LGNKSLAFSMLR---EYLEAVSNTRQHLSVVVPGSE 868
            LC   S    C    K        L   +  F   R    Y +   N +   S V PGS 
Sbjct: 858  LCFGGSIFGNCFQLTKYQSKMGPHLRRMATHFDQDRWKSAYDQQYPNVQVPFSTVFPGST 917

Query: 869  IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS--RGNNCFGSYPTHQLN 926
            IP+WFM+ ++G  + +    + Y+    +G+A+  V      S  RG + + +   H LN
Sbjct: 918  IPDWFMHYSKGHEVDIDVDPDWYD-SSFLGFALSAVIAPKDGSITRGWSTYCNLDLHDLN 976

Query: 927  ---CHIGHGIYGIGFRD------KFGQAGSDHLWLLYL 955
                      +   F D      +     SDHLWL Y+
Sbjct: 977  SESESESESSWVCSFTDARTCQLEDTTINSDHLWLAYV 1014


>gi|317415948|emb|CAR94514.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 2048

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 305/748 (40%), Positives = 439/748 (58%), Gaps = 73/748 (9%)

Query: 15  GSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLS 74
           GS +VR+IGICGM G+GK+T+A+ +   I  +F+A  F+  V EIS K GL  +++QL  
Sbjct: 221 GSEEVRVIGICGMPGIGKSTVAKALSQRIHSQFDAISFISKVGEISKKKGLFHIKKQLCD 280

Query: 75  QLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAG-------NREWFG 127
            LL   D  +    D  D++  RL+ K+VL+++D+V +++Q++++AG       NR  FG
Sbjct: 281 HLL---DKKV-TTKDVDDVICKRLRDKRVLIILDNVDELEQIEAVAGSDGAGLSNR--FG 334

Query: 128 SGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARII 187
            GSRII+T+ DE LL  +   E+Y    L  D+AL LF  KA KT  P     +LS   +
Sbjct: 335 KGSRIIVTTTDERLLIDYN-PEIYTIEKLTPDQALLLFCRKALKTDHPTDAFKKLSNEFV 393

Query: 188 RYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPS---EILDILQISFDGLQELEKK 244
            Y  G PLALEV G  L  R  D W + L+ L+ +  S   +I+ +L+ SFDGL+  E++
Sbjct: 394 DYIDGHPLALEVFGHSLWKREEDYWSTKLKSLKDKGYSGEKKIIGVLKASFDGLENQEQQ 453

Query: 245 -IFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQ 303
            +FLD ACFFKG D   +    E CG++P I I +L EK L+++    LWMHDLLQ++G+
Sbjct: 454 DMFLDTACFFKGEDVCRLEKIFESCGYYPGINITILCEKSLVSIVGGRLWMHDLLQKMGR 513

Query: 304 QIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFS 363
            +V  +S +E G+RSRLW   +   VL ++ GT+ V+GI L +    ++V+L      FS
Sbjct: 514 GLVLGESKKE-GERSRLWHHTDALPVLKKNKGTDAVQGIFLSS-PQPDKVHL--KKDPFS 569

Query: 364 KMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM-CYSRIG 422
            M NLRLLKI N++    LEYLS+ L LL W   PLK LPS+ + DK +E+ +       
Sbjct: 570 NMDNLRLLKIYNVEFSGSLEYLSDELSLLEWHKCPLKSLPSSFEPDKLVELNLSESEIEE 629

Query: 423 ELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLI 482
              +  + L+KL V+ LS  + LI+ PDF   PNLE+LIL+G                  
Sbjct: 630 LWEEIERPLEKLAVLNLSDCQKLIKTPDFDKVPNLEQLILKG------------------ 671

Query: 483 ILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEH 542
                 CTSL  +P  I        NL+SL   I          +SG  K ++ PEI E 
Sbjct: 672 ------CTSLSAVPDDI--------NLRSLTNFI----------LSGCSKLKKLPEIGED 707

Query: 543 MEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP-VTVSNLKCLRSLKLSGC 601
           M+ L +LHL+GTAI  LP SI+ L+GL+LLNL++C++L  LP V  ++L  L+ L +SGC
Sbjct: 708 MKQLRKLHLDGTAIEELPTSIKHLTGLILLNLRDCKNLLSLPDVICTSLTSLQILNVSGC 767

Query: 602 SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA- 660
           S L + PE + S++ L EL+   T+I+E+P+SI+ LT L LLNL +CKNL+ LP  I   
Sbjct: 768 SNLNELPENLGSLECLQELYASRTAIQELPTSIKHLTDLTLLNLRECKNLLTLPDVICTN 827

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA---VPHSTSWYSYIPINLMRKSV 717
           L SL+ LNLSGC  L  +PE LG +E L+EL  SGTA   +P S S  S +   ++    
Sbjct: 828 LTSLQILNLSGCSNLNELPENLGSLECLQELYASGTAISQIPESISQLSQLGELVLDGCS 887

Query: 718 ALK-LPSLSGLCSLRKLNLTDCNLMEGA 744
            L+ LP L    S+R +++ +C L++GA
Sbjct: 888 KLQSLPRLP--FSIRAVSVHNCPLLQGA 913



 Score =  191 bits (484), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 156/441 (35%), Positives = 233/441 (52%), Gaps = 21/441 (4%)

Query: 481  LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
            L I N++   SL  L  ++ +    K  LKSLP++    K L  L++S       + EI 
Sbjct: 577  LKIYNVEFSGSLEYLSDELSLLEWHKCPLKSLPSSFEPDK-LVELNLSESEIEELWEEIE 635

Query: 541  EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
              +E L+ L+L            + +  L  L LK C SL  +P  + NL+ L +  LSG
Sbjct: 636  RPLEKLAVLNLSDCQKLIKTPDFDKVPNLEQLILKGCTSLSAVPDDI-NLRSLTNFILSG 694

Query: 601  CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSI-I 659
            CSKLKK PEI   MK L +L LDGT+I+E+P+SI+ LT L LLNL DCKNL+ LP  I  
Sbjct: 695  CSKLKKLPEIGEDMKQLRKLHLDGTAIEELPTSIKHLTGLILLNLRDCKNLLSLPDVICT 754

Query: 660  ALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIP----INLMRK 715
            +L SL+ LN+SGC  L  +PE LG +E L+EL  S TA+    +   ++     +NL   
Sbjct: 755  SLTSLQILNVSGCSNLNELPENLGSLECLQELYASRTAIQELPTSIKHLTDLTLLNLREC 814

Query: 716  SVALKLPSL--SGLCSLRKLNLTDC-NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSI 772
               L LP +  + L SL+ LNL+ C NL E  LP ++G+L  L+ELY S  +   +P SI
Sbjct: 815  KNLLTLPDVICTNLTSLQILNLSGCSNLNE--LPENLGSLECLQELYASGTAISQIPESI 872

Query: 773  THLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLV-TLLDALKLCKSDSTMIACLD 831
            + LS+L  + L+ C +LQSLP+LP +IR V V+ C  L     + + +  S +   + L+
Sbjct: 873  SQLSQLGELVLDGCSKLQSLPRLPFSIRAVSVHNCPLLQGAHSNKITVWPSAAAGFSFLN 932

Query: 832  SLK--------LLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSIT 883
              +         L +K L +   + + E      +        +EIP W   ++  S+IT
Sbjct: 933  RQRHDDIAQAFWLPDKHLLWPFYQTFFEDAIRRDERFEYGYRSNEIPAWLSRRSTESTIT 992

Query: 884  VTRPSNLYNKKKLVGYAICCV 904
            +  P ++  K K +  A+C +
Sbjct: 993  IPLPHDVDGKSKWIKLALCFI 1013



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 61/157 (38%), Gaps = 19/157 (12%)

Query: 865  PGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGN-NCFGSYPTH 923
            P S   EWF  Q+ GSSI V  P +LY     +G A+C  F ++ N   + +      +H
Sbjct: 1675 PSSITLEWFGDQSSGSSIRVPLPPHLYRATNWIGLALCTSFSIVDNPTADLDNLNPEISH 1734

Query: 924  QLNCHIGHGIYGIGFRDKFGQAGSD--------HLWLLYLSRQTCYDIRLPLESNLEPFE 975
             L CH+      I     +     +         +W+ Y+ R    D     +     F 
Sbjct: 1735 HLICHLESDRGTIEPLHDYCTTNEEFQWLPFGGFIWVSYIPRAWFSDQLNECDVLEASFA 1794

Query: 976  SNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEELDQT 1012
            S+H          +   V  CGL  VY  + EE+ QT
Sbjct: 1795 SDH----------EAFTVHECGLRLVYQHDEEEIKQT 1821



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 24/160 (15%)

Query: 865  PGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGN-NCFGSYPTH 923
            P +EI EWF +Q+ G S+ +  PSNL      +G A+C  F VL +S  +        +H
Sbjct: 1462 PPNEIVEWFGHQSSGPSVKIPLPSNLCEDTNWIGLALCAYFSVLDHSTIDLENLNPEISH 1521

Query: 924  QLNCHI-----------GHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLE 972
             L C +           G+      F+  +   G   +WL Y+ R  C+         L+
Sbjct: 1522 NLTCLLETDESCLESLHGYSTNSQEFKWLYRMGG--FIWLSYIPR--CW-----FSDQLK 1572

Query: 973  PFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEELDQT 1012
              E  H+  S     G  L V  CGL  +Y+++ E L +T
Sbjct: 1573 --ERGHLEASIGSDHG-SLGVHRCGLRLIYLEDEEGLKET 1609


>gi|255569048|ref|XP_002525493.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223535172|gb|EEF36851.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1084

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 275/666 (41%), Positives = 398/666 (59%), Gaps = 48/666 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DS   K++ L+  G  D+R +G+ GM G+GKTTIA  +++ +S +FE   FL+N++E S
Sbjct: 187 LDSHIRKIKKLLQIGLPDIRTVGLWGMSGIGKTTIAGAIFNTLSSQFEGCCFLENIKEES 246

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            + GLV L+ +LLS++L   +  I     G   L +RL+ KKVLLV+DDV DV Q+++L 
Sbjct: 247 ERCGLVPLRDKLLSEILMEGNVHIATPSIGSTSLKNRLRHKKVLLVLDDVNDVDQIETLI 306

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G  + FG GSR+++TSRD+ +LK + VDE+Y+  GL+ DEALQLFN+ AFK      + +
Sbjct: 307 GRCD-FGLGSRVLVTSRDKQVLK-NVVDEIYEVEGLSDDEALQLFNLHAFKDNCSTTDKI 364

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS R++++A G PLAL+VLGS L  RS  +W S LE+LE  P  +I  +L+ SFD L +
Sbjct: 365 KLSYRVVKHAQGNPLALKVLGSSLFARSKQDWESALEKLERTPQPKIFHVLRSSFDALDD 424

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            EK IFLDIACFFKG    +V   L GCG    IGI VL  KCL+++  N L MHDLLQE
Sbjct: 425 EEKSIFLDIACFFKGQQIGFVKKILNGCGLSAGIGISVLAGKCLVSIQENKLEMHDLLQE 484

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           + Q+IV ++S +ELGKRSRLW   + C VLT++ GTE VEGI  D Y     V L  S++
Sbjct: 485 MAQEIVHQESIKELGKRSRLWSPSDACQVLTKNLGTERVEGIFFDTYKM-GAVDL--SSR 541

Query: 361 AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
           AF ++        C + LP GL++LS+ LR L   GYPL ++PSN Q +  +++ + YS 
Sbjct: 542 AFVRIVG----NNCKVNLPQGLDFLSDELRYLHGDGYPLSYMPSNFQAENLVQLTLAYSS 597

Query: 421 IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
           I +LW G++       +ILS   ++   P  +   +++KL L+G T + EI  S+    +
Sbjct: 598 IKQLWTGVQ-------LILSGCSSITEFPHVSW--DIKKLFLDG-TAIEEIPSSIKYFPE 647

Query: 481 LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
           L+ L++++C   +                  LP TI   K L  L++SG   F  FPEI+
Sbjct: 648 LVELSLQNCKRFL-----------------RLPRTIWKFKLLQKLNLSGCSTFVSFPEIL 690

Query: 541 EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL----EIL-------PVTVSN 589
           E M  L  L+L+GT I  LP  +  L GL+ L L++C++L    E++       P TV  
Sbjct: 691 EVMGSLKYLYLDGTGISNLPSPMRNLPGLLSLELRSCKNLYGLQEVISGRVVKSPATVGG 750

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK 649
           ++ LR L LSGC  L + P  +  +  L  L L     +E+P SI  L +L+ L L DCK
Sbjct: 751 IQYLRKLNLSGCC-LLEVPYCIDCLPSLESLDLSRNLFEEIPVSINKLFELQYLGLRDCK 809

Query: 650 NLVRLP 655
            L+ LP
Sbjct: 810 KLISLP 815



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 209/433 (48%), Gaps = 47/433 (10%)

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           + L  LH +G  +  +P + +          +N   L +   ++  L     L LSGCS 
Sbjct: 564 DELRYLHGDGYPLSYMPSNFQA---------ENLVQLTLAYSSIKQLWTGVQLILSGCSS 614

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
           + +FP +     D+ +LFLDGT+I+E+PSSI+   +L  L+L +CK  +RLP +I   K 
Sbjct: 615 ITEFPHVSW---DIKKLFLDGTAIEEIPSSIKYFPELVELSLQNCKRFLRLPRTIWKFKL 671

Query: 664 LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIP--INLMRKSV---- 717
           L+ LNLSGC    + PE L  + SL+ L + GT + +  S    +P  ++L  +S     
Sbjct: 672 LQKLNLSGCSTFVSFPEILEVMGSLKYLYLDGTGISNLPSPMRNLPGLLSLELRSCKNLY 731

Query: 718 ---------ALKLPS-LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS 767
                     +K P+ + G+  LRKLNL+ C L+E  +P  I  L SL+ L LS+N F  
Sbjct: 732 GLQEVISGRVVKSPATVGGIQYLRKLNLSGCCLLE--VPYCIDCLPSLESLDLSRNLFEE 789

Query: 768 LPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL-LDALKLCKSD-ST 825
           +P SI  L +L  + L DCK+L SLP LPP + ++  + C SL +  LD   +  ++   
Sbjct: 790 IPVSINKLFELQYLGLRDCKKLISLPDLPPRLTKLDAHKCCSLKSASLDPTGIEGNNFEF 849

Query: 826 MIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSE---IPEWF-MYQNEGSS 881
                 SL L   + +    L ++          +S ++ G     IP W   + ++G+S
Sbjct: 850 FFTNCHSLDLDERRKIIAYALTKFQVYSERLHHQMSYLLAGESSLWIPSWVRRFHHKGAS 909

Query: 882 ITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDK 941
            TV  PSN +     +G+ +  V  +  + R   C G +   Q+ C          F+++
Sbjct: 910 TTVQLPSN-WADSDFLGFEL--VTSIAVDCRICKCNGDH-DFQVKCR-------YHFKNE 958

Query: 942 FGQAGSDHLWLLY 954
           +   G D L+  Y
Sbjct: 959 YIYDGGDDLYCYY 971


>gi|224136171|ref|XP_002327398.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222835768|gb|EEE74203.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 722

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 272/547 (49%), Positives = 355/547 (64%), Gaps = 31/547 (5%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           MDSR + L   +D   +D   IGICGMGG+GKTT+ARV+YD I  +F  S FL NVRE+ 
Sbjct: 199 MDSRLKVLNEYIDEQVNDTLFIGICGMGGMGKTTVARVLYDRIRWQFGGSCFLANVREVF 258

Query: 60  SSKGGLVSLQRQLLSQL---LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQL 116
           + K GL  LQ QLLS++   L  A +S       ID++  RL+ KKVLL++DDV D +QL
Sbjct: 259 AEKDGLCRLQEQLLSEISMELPTARDSSRR----IDLIKRRLRLKKVLLILDDVDDEEQL 314

Query: 117 QSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
           Q LA     FG GSRIIITSR++H+L +HGV  +Y+   LN  +AL LF+ KAFK  QP 
Sbjct: 315 QMLAAEHGSFGPGSRIIITSRNKHVLDSHGVTRIYEAEKLNDKDALLLFSWKAFKRDQPA 374

Query: 177 QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
           ++  +LS +++ YA GLPLALEV+GSFL  R + EW+S + R+   P  +I+D+L+ISFD
Sbjct: 375 EDLSELSKQVVGYANGLPLALEVIGSFLHKRGLREWKSAINRMNDIPDRKIIDVLRISFD 434

Query: 237 GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
           GL ELEKKIFLDIACF KG  +D +T  L+ CGFH  IG++VLIEK LI V  + +WMH+
Sbjct: 435 GLHELEKKIFLDIACFLKGMKKDRITRLLDSCGFHADIGMQVLIEKSLIRVSRDEIWMHN 494

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LLQ++G++IV+ +SPEE G+RSRL   ++V   L +STG   +E I LD    +   +  
Sbjct: 495 LLQKMGEEIVRCESPEEPGRRSRLHTYKDVSDALKDSTGK--IESIFLDLPKAKEATW-- 550

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            +  AFSKMT LRLLKI N+ L  G EYLSN LR L W  YP K LP+  + D+ +E+YM
Sbjct: 551 -NMTAFSKMTKLRLLKIHNVDLSEGPEYLSNELRFLEWHAYPSKSLPACFRPDELVELYM 609

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             SRI +LW G K L  LK++ LS+S  LI  PDFTG PNLE LILEGC  L E+HPS  
Sbjct: 610 SCSRIEQLWCGCKILVNLKIINLSNSLYLINTPDFTGIPNLESLILEGCASLSEVHPSFG 669

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
            H KL ++N+ +C SL  LP  + M+SLE   L                  SG  K  +F
Sbjct: 670 RHKKLQLVNLVNCYSLRILPSNLEMESLEVCTL------------------SGCSKLDKF 711

Query: 537 PEIVEHM 543
           P+IV +M
Sbjct: 712 PDIVGNM 718



 Score = 47.4 bits (111), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 25/145 (17%)

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           + L EL++  + I  L    ++L  L ++NL N   L   P   + +  L SL L GC+ 
Sbjct: 602 DELVELYMSCSRIEQLWCGCKILVNLKIINLSNSLYLINTP-DFTGIPNLESLILEGCA- 659

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
                                 S+ EV  S     KL+L+NL +C +L  LPS++  ++S
Sbjct: 660 ----------------------SLSEVHPSFGRHKKLQLVNLVNCYSLRILPSNL-EMES 696

Query: 664 LKTLNLSGCFKLENVPETLGQIESL 688
           L+   LSGC KL+  P+ +G +  L
Sbjct: 697 LEVCTLSGCSKLDKFPDIVGNMNCL 721



 Score = 44.7 bits (104), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 3/94 (3%)

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTA-IRGLPLSIELLSGLVLLNLKNCRSL 580
           L  +++S  L     P+    + +L  L LEG A +  +  S      L L+NL NC SL
Sbjct: 627 LKIINLSNSLYLINTPDFT-GIPNLESLILEGCASLSEVHPSFGRHKKLQLVNLVNCYSL 685

Query: 581 EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
            ILP  +  ++ L    LSGCSKL KFP+IV +M
Sbjct: 686 RILPSNL-EMESLEVCTLSGCSKLDKFPDIVGNM 718


>gi|359493351|ref|XP_002277841.2| PREDICTED: uncharacterized protein LOC100251634 [Vitis vinifera]
          Length = 2816

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 293/768 (38%), Positives = 428/768 (55%), Gaps = 74/768 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DS  ++L  L+   S+DVRMIGICGM G+GKT +AR +Y+  S +FE   FL NV  + 
Sbjct: 189 VDSCIKELESLLCFESTDVRMIGICGMSGIGKTALARSIYEQFSDKFEGCCFLTNVGNVE 248

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            + G    +++LLS +LK  D  +      I  + +RL  KKVL+V+D+V     +++L 
Sbjct: 249 -REGTDYWKKELLSSVLKDNDIDV-----TITSIKTRLGSKKVLIVVDNVSHQLTMKTLI 302

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G  +WFG  SRIIIT+R++  L   G+D VY+   L  D+A++LFN  AF+   P +   
Sbjct: 303 GKHDWFGPQSRIIITTRNKRFLS--GMDAVYEVQKLQDDKAIELFNHCAFRKDHPAESFK 360

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           + S R I YA GLPLALEVLGS L  +  D W+S L+ LE    +EI  +LQ SFD L +
Sbjct: 361 RFSLRFIAYAQGLPLALEVLGSSLYKKDQDYWKSKLDELEKTLDNEIHGVLQKSFDELND 420

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            EK IFLDIACFFK +++D++   LE C   P  GI  LI++ LIT+    L MHDLLQ+
Sbjct: 421 NEKDIFLDIACFFKCSNKDHIMKILESCNLFPGSGIENLIDRFLITISCEKLEMHDLLQK 480

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G +IV  Q+ +E GKRSRLW ++++CHVL ++TGT+ V+GI L N     E++   + +
Sbjct: 481 MGWKIVT-QTSKEPGKRSRLWMQDDICHVLEKNTGTKEVKGIFL-NLFGLKEIHF--TTE 536

Query: 361 AFSKMTNLRLLKI-------------------CNLQLPNGLEYLSNRLRLLGWRGYPLKF 401
           AF++M  LRLL++                   C ++  +  ++ S+ LR L W  YPL+ 
Sbjct: 537 AFARMNRLRLLEVYESNLSDDSDSESTSRKRKCKVRFSDDFKFHSDELRYLYWHEYPLQT 596

Query: 402 LPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLI 461
           LPS+ +    + + M YS+I E WKG +  + LK + LS+S+ L+  PDF+   NLE+L+
Sbjct: 597 LPSHFKPKNLVCLCMPYSQITEPWKGSQVCENLKFLDLSNSKFLMETPDFSRITNLEELV 656

Query: 462 LEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKC 521
           L+GCT L  +H SL    KL  L++ +C  L   P                   I  L  
Sbjct: 657 LDGCTNLCHLHSSLGRLRKLAFLSVSNCIKLRDFPA------------------IYKLVS 698

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
           L TLD+SG    ++FP+I +HM  LS+L+L+GTAI  +P SI   S LVLL+L NC+ L+
Sbjct: 699 LQTLDLSGCSNLQKFPDISQHMPCLSKLYLDGTAITEIPASIAYASELVLLDLTNCKELK 758

Query: 582 ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLD--------------GTSI 627
            LP ++  L  LR L LSGCSKL KF +   ++  LS   L               G   
Sbjct: 759 FLPSSIPKLTLLRILTLSGCSKLGKFQQNSGNLDRLSGKRLSHLGILSSLKSLNLSGNRF 818

Query: 628 KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV-PETLGQI- 685
             +P   + L+ L  L+L DC+ L  LP   +   S++ LN S C  LE++ PE++    
Sbjct: 819 IHLPCIFKGLSNLSRLDLHDCRRLQTLP---LLPPSVRILNASNCTSLESILPESVFMSF 875

Query: 686 ------ESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGL 727
                   L  +    T  PH  S  +++     R +   + PS +G+
Sbjct: 876 RGCLFGNCLRLMKYPSTMEPHIRSMATHVDQERWRSTYDEEYPSFAGI 923



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/241 (42%), Positives = 150/241 (62%), Gaps = 17/241 (7%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +DS   +L  L+   S+DV MIGI GMGG+GKTT+AR +Y+ IS +FE S FL NV +++
Sbjct: 1584 VDSSVRELESLLCLESNDVHMIGIWGMGGIGKTTLARAIYEKISDKFEGSCFLANVGDLA 1643

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
             K G   L+ QLLS++L+       N+   I  L +RL  KKVL+V+D+V     L++LA
Sbjct: 1644 -KEGEDYLKDQLLSRVLRDK-----NIDVTITSLKARLHSKKVLIVLDNVNHQSILKNLA 1697

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            G   WFG  SRIIIT+RD+ LL  HGV ++++   L  ++A++LFN  AF+   P  + +
Sbjct: 1698 GESNWFGPQSRIIITTRDKQLLTMHGVKDIHEVQKLQDNKAIELFNHYAFRNEPPSSDVM 1757

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            +L   +I YA GLPLALEVLGS    +S DEW            +E ++++ ++  GL+E
Sbjct: 1758 ELIHHVIAYAQGLPLALEVLGSSFCNKSKDEW-----------GTEDIEVIVLNLTGLKE 1806

Query: 241  L 241
            +
Sbjct: 1807 I 1807



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 150/533 (28%), Positives = 226/533 (42%), Gaps = 105/533 (19%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
            L+ L LS    L + P+  R + +L EL LDG T++  + SS+  L KL  L++S+C  L
Sbjct: 629  LKFLDLSNSKFLMETPDFSR-ITNLEELVLDGCTNLCHLHSSLGRLRKLAFLSVSNCIKL 687

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYI 708
               P+ I  L SL+TL+LSGC  L+  P+    +  L +L + GTA+   P S ++ S +
Sbjct: 688  RDFPA-IYKLVSLQTLDLSGCSNLQKFPDISQHMPCLSKLYLDGTAITEIPASIAYASEL 746

Query: 709  PINLMRKSVALK-LPS-LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK---- 762
             +  +     LK LPS +  L  LR L L+ C+ + G    + GNL  L    LS     
Sbjct: 747  VLLDLTNCKELKFLPSSIPKLTLLRILTLSGCSKL-GKFQQNSGNLDRLSGKRLSHLGIL 805

Query: 763  ----------NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVT 812
                      N F+ LP     LS L  ++L DC+RLQ+LP LPP++R +  + C SL +
Sbjct: 806  SSLKSLNLSGNRFIHLPCIFKGLSNLSRLDLHDCRRLQTLPLLPPSVRILNASNCTSLES 865

Query: 813  LL--------------DALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQ 858
            +L              + L+L K  STM   + S+    ++    S   E   + +    
Sbjct: 866  ILPESVFMSFRGCLFGNCLRLMKYPSTMEPHIRSMATHVDQERWRSTYDEEYPSFAGIP- 924

Query: 859  HLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLY-----NKKKLVGYAICCVFHVLKNSRG 913
              S VVPGS IP+WF  + EG  I +    N Y     +    +G A+  V        G
Sbjct: 925  -FSNVVPGSGIPDWFRDRREGHDINIEVHQNWYSSTPGSNNNFLGLALSAVVAPQDGFLG 983

Query: 914  NNCFGSYPTHQL---------NCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIR 964
                G YP   L         + HI     G  ++ +     SDHLWL Y+         
Sbjct: 984  R---GWYPYCDLYTQNDPKSESSHICSFTDGRTYQLEHTPIESDHLWLAYV--------- 1031

Query: 965  LPLESNLEPFESNHVNVSFEPW------LGQGLE--VKMCGLHPVYMDEVEELDQTTNQP 1016
                        +  + S E W       G   E  VK CG+ PVY   +++     N+P
Sbjct: 1032 -----------PSFFSFSCEKWSCIKFSFGTSGECVVKSCGVCPVY---IKDTTNDHNKP 1077

Query: 1017 SRFTVYNLNEFDQHFVGSKMIVATTSKRSLTEYFGAEASGSGCCDDEEPQPKR 1069
                  ++N+          ++  T  RS+         G+   D   P P+R
Sbjct: 1078 MGSAYTDMND---------SVLQATRIRSV---------GNSRTDSHAPDPER 1112



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 171/398 (42%), Gaps = 100/398 (25%)

Query: 533  FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSG----------------LVLLNLKN 576
            FR  P   + ME +   H+   A +GLPL++E+L                  +++LNL  
Sbjct: 1747 FRNEPPSSDVMELIH--HVIAYA-QGLPLALEVLGSSFCNKSKDEWGTEDIEVIVLNLTG 1803

Query: 577  CRSLEILPVTVSNLKCLRSL---------KLSGCSKLKKFPEIVRSMKDLSELFLDGTSI 627
             + +       + +  LR L         ++  CSKL+K P I + M  L  L LDGT+I
Sbjct: 1804 LKEIRFTTAAFAKMTKLRMLIIISECSANQMQCCSKLEKSPVISQHMPCLRRLCLDGTAI 1863

Query: 628  KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
             E+PSSI   T+L LL+L +C+ L+ LPSSI  L  L+TL+LSGC  L       G +++
Sbjct: 1864 TELPSSIAYATQLVLLDLKNCRKLLSLPSSISKLTLLETLSLSGCLDLGKCQVNSGNLDA 1923

Query: 688  LEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPS 747
            L +                                +L  LCSLR+L L +C+     LP 
Sbjct: 1924 LPQ--------------------------------TLDRLCSLRRLELQNCS----GLP- 1946

Query: 748  DIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSL-PQLPPNIRQVRVNG 806
                            S  +LP+S+    +L+N    +CK L+ + PQ         V  
Sbjct: 1947 ----------------SLPALPSSV----ELINA--SNCKSLEDISPQ--------SVFL 1976

Query: 807  CASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPG 866
            C       +  KL K  STM   L  +    N+   +S    + +   N +   S V PG
Sbjct: 1977 CFGGSIFGNCFKLSKYPSTMERDLQRMAAHANQERWWST---FEQQNPNVQVPFSTVFPG 2033

Query: 867  SEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCV 904
            S IP+WF ++++G  I +    N Y     +G+A+  V
Sbjct: 2034 SRIPDWFKHRSQGHEINIKVSPNWYT-SNFLGFALSAV 2070



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 82/161 (50%), Gaps = 13/161 (8%)

Query: 532  KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
            K  + P I +HM  L  L L+GTAI  LP SI   + LVLL+LKNCR L  LP ++S L 
Sbjct: 1839 KLEKSPVISQHMPCLRRLCLDGTAITELPSSIAYATQLVLLDLKNCRKLLSLPSSISKLT 1898

Query: 592  CLRSLKLSGCSKLKK----------FPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLE 641
             L +L LSGC  L K           P+ +  +  L  L L   S   +PS   L + +E
Sbjct: 1899 LLETLSLSGCLDLGKCQVNSGNLDALPQTLDRLCSLRRLELQNCS--GLPSLPALPSSVE 1956

Query: 642  LLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
            L+N S+CK+L  +    + L    ++    CFKL   P T+
Sbjct: 1957 LINASNCKSLEDISPQSVFLCFGGSI-FGNCFKLSKYPSTM 1996



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 15/167 (8%)

Query: 455  PNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPT 514
            P L +L L+G T + E+  S+    +L++L++K+C  L++LP      S+ KL L    +
Sbjct: 1851 PCLRRLCLDG-TAITELPSSIAYATQLVLLDLKNCRKLLSLPS-----SISKLTLLETLS 1904

Query: 515  TISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL 574
                L        SG+L     P+ ++ +  L  L L+  +  GLP    L S + L+N 
Sbjct: 1905 LSGCLDLGKCQVNSGNLD--ALPQTLDRLCSLRRLELQNCS--GLPSLPALPSSVELINA 1960

Query: 575  KNCRSLE-ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL 620
             NC+SLE I P +V    C        C KL K+P  +   +DL  +
Sbjct: 1961 SNCKSLEDISPQSV--FLCFGGSIFGNCFKLSKYPSTME--RDLQRM 2003


>gi|359493208|ref|XP_002269054.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1695

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 283/720 (39%), Positives = 417/720 (57%), Gaps = 78/720 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M+ R EKL  L++  S+DV  +GICG+GG+GKTTIA+ +Y+ IS++F+ + FL NVRE S
Sbjct: 193 MNIRLEKLISLINIDSNDVCFVGICGLGGIGKTTIAKALYNKISNQFQGASFLANVRENS 252

Query: 61  SK-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            K   ++ LQRQLL  + K  +  I NV +G+D +   L  ++VL+V+DDV + +QL   
Sbjct: 253 EKHSDILQLQRQLLDDIDKGKNRKISNVHEGMDAIKKVLSLRRVLVVLDDVDNFEQLNHF 312

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG GSRI+IT+R++HLL    VD+ ++   LN +EALQLF++ AFK     ++ 
Sbjct: 313 AGEHDWFGPGSRILITTRNKHLLH---VDKYHEIEELNSEEALQLFSLYAFKPTCHQEDY 369

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             L  RI++YA GLPLAL+VLGS L  R+  EW S L +LE EP  EI ++L+IS+DGL 
Sbjct: 370 EDLQDRIVKYAKGLPLALQVLGSHLCERTPSEWESELHKLEREPIQEIQNVLKISYDGLD 429

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
             + +IFLDIACFFKG D+D+V+  L+GC F+   G  VL +KCLIT+ +N ++MHDL+Q
Sbjct: 430 RTQGEIFLDIACFFKGQDKDFVSRILDGCDFYAESGFSVLCDKCLITILDNKIYMHDLIQ 489

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           ++G  IV+ Q+PE+ GK SRLW+ E+V  VLT + GTE ++GI LD         L  + 
Sbjct: 490 QMGWHIVREQNPEKPGKWSRLWEREDVFRVLTRNEGTEAIKGIFLD---MSTSKQLQFTT 546

Query: 360 KAFSKMTNLRLLKI-----------------------CNLQLPNGLEYLSNRLRLLGWRG 396
           +AF  M +LRLLK+                         +      E+ S  LR L W G
Sbjct: 547 EAFKVMNDLRLLKVHQDANYDSAVKYWTLAGLFEMHLSQVHFCRDFEFPSQELRYLHWDG 606

Query: 397 YPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPN 456
           YPL+ LPSN   +  +E+ +  S I +LW+  +   KLKV+ LSHS++L ++P+ +  PN
Sbjct: 607 YPLESLPSNFYAENLVELNLRCSNIKQLWE-TELFKKLKVINLSHSKHLNKIPNPSCVPN 665

Query: 457 LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
           LE L LEGC  L  +  S+    +L  L    C                  NL+S P  +
Sbjct: 666 LEILTLEGCINLESLPRSIYKLRRLKTLCCGGCK-----------------NLRSFPEIM 708

Query: 517 SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
             ++ L  LD+  +    + P  +EH                       L GL  L+L N
Sbjct: 709 GDMEKLRKLDLD-NTAIVKLPSSIEH-----------------------LKGLEYLDLSN 744

Query: 577 CRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIEL 636
           C+ L  +P ++ NL  L+ L    CSKL+K PE ++S+K L +L+L   +  ++P S+  
Sbjct: 745 CKDLITVPQSICNLTSLKFLNFDFCSKLEKLPEDLKSLKCLQKLYLQDLNC-QLP-SVSG 802

Query: 637 LTKLELLNLSDCKNLV--RLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
           L  L++LNLS+C NL+   +PS +  L SLK L+LS      ++P ++ Q+  L+ L +S
Sbjct: 803 LCSLKVLNLSEC-NLMDGEIPSEVCQLSSLKELDLSW-NHFSSIPASISQLSKLKALGLS 860



 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 164/502 (32%), Positives = 248/502 (49%), Gaps = 66/502 (13%)

Query: 542  HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
            +ME L +L+L+GTAI+ +P SI+ LS LV    +NC++LE LP ++  LK L+ L  + C
Sbjct: 1132 NMECLQKLYLDGTAIKEIPSSIDSLSILVEFYTRNCKNLESLPRSICRLKYLQVLCCTNC 1191

Query: 602  SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
            SKL  FPE++ +M +L EL L GT+I+++PSSIE L  LE L+L+ CK LV LP+ I  L
Sbjct: 1192 SKLGSFPEVMENMNNLRELHLHGTAIQDLPSSIENLKGLEFLDLASCKKLVTLPTHICNL 1251

Query: 662  KSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKL 721
            KSLKTL++ GC KL  +P++LG ++ LE LD                       S+A  L
Sbjct: 1252 KSLKTLHVYGCSKLNKLPKSLGSLQCLEHLDAGCLG------------------SIAPPL 1293

Query: 722  PSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLS-------------------- 761
            PS SGLCSLR L+L   NLM+ ++  DI  L SL+ L L+                    
Sbjct: 1294 PSFSGLCSLRILHLNGLNLMQWSIQDDICRLYSLEVLDLTNCNLIDDGTADEIFHLSSLQ 1353

Query: 762  -----KNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDA 816
                 +N    +P  I+ LSKL  +    C+    +P+LP ++R + V+ C  L+TL + 
Sbjct: 1354 VLLLSRNHISKIPAGISQLSKLQVLGFSHCEMAVEIPELPSSLRSIDVHACTGLITLSNP 1413

Query: 817  LKLCKSDSTMIACLDS-LKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVP-GSEIPEWFM 874
              L    +++  C  S ++ L   +  +    E         Q +S+++P  S IPEW  
Sbjct: 1414 SSLFW--ASLFKCFKSAIQDLECGNHCYDPSPEAWPDFCYFGQGISILIPRSSGIPEWIR 1471

Query: 875  YQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGN-NCFGSYPTHQLNCHIGHGI 933
            +Q  GS +T   P   Y  K L+G+A+  V   L N   + +     P   L C +    
Sbjct: 1472 HQKNGSRVTTELPRYWYKNKDLLGFALFSVHIPLDNESVDISEDEDLPCCSLKCELTFRG 1531

Query: 934  YGIGFRDKF----------GQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSF 983
                F D                S  +W+LY  +     I+    SN    +   +  SF
Sbjct: 1532 DQFAFLDDLSLDSWCECYKNDGASGQVWVLYYPKVA---IKEKYHSN----KWRRLKASF 1584

Query: 984  EPWL-GQGLEVKMCGLHPVYMD 1004
              +L G  ++V+ CG+  +Y+D
Sbjct: 1585 HCYLNGTPVKVEKCGMQLIYVD 1606



 Score =  196 bits (499), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 127/342 (37%), Positives = 192/342 (56%), Gaps = 35/342 (10%)

Query: 566 LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT 625
           +  L +L L+ C +LE LP ++  L+ L++L   GC  L+ FPEI+  M+ L +L LD T
Sbjct: 663 VPNLEILTLEGCINLESLPRSIYKLRRLKTLCCGGCKNLRSFPEIMGDMEKLRKLDLDNT 722

Query: 626 SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI 685
           +I ++PSSIE L  LE L+LS+CK+L+ +P SI  L SLK LN   C KLE +PE L  +
Sbjct: 723 AIVKLPSSIEHLKGLEYLDLSNCKDLITVPQSICNLTSLKFLNFDFCSKLEKLPEDLKSL 782

Query: 686 ESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGAL 745
           + L++L +                     + +  +LPS+SGLCSL+ LNL++CNLM+G +
Sbjct: 783 KCLQKLYL---------------------QDLNCQLPSVSGLCSLKVLNLSECNLMDGEI 821

Query: 746 PSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRV- 804
           PS++  L SLKEL LS N F S+P SI+ LSKL  + L  C+ L  +P+LP  ++ +   
Sbjct: 822 PSEVCQLSSLKELDLSWNHFSSIPASISQLSKLKALGLSHCRNLLQIPELPSTLQFLDAH 881

Query: 805 NGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVV 864
           N   +L +    L    S+     C  S +L    S ++     + E V       S+  
Sbjct: 882 NSHFTLSSPSSFLPSSFSEFQDFVCGSSFQLCVCYSYSY-----FEEGV-------SIFF 929

Query: 865 PG-SEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
           PG S IPEW M +N G+ +T+  P + +  K  +G+A+C  +
Sbjct: 930 PGISGIPEWIMGENMGNHVTIDLPQDWFEDKDFLGFALCSAY 971



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/232 (36%), Positives = 123/232 (53%), Gaps = 24/232 (10%)

Query: 445  LIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSL 504
            L  MPD      L+KL L+G T + EI  S+   + L+    ++C               
Sbjct: 1124 LTTMPDTWNMECLQKLYLDG-TAIKEIPSSIDSLSILVEFYTRNCK-------------- 1168

Query: 505  EKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIE 564
               NL+SLP +I  LK L  L  +   K   FPE++E+M +L ELHL GTAI+ LP SIE
Sbjct: 1169 ---NLESLPRSICRLKYLQVLCCTNCSKLGSFPEVMENMNNLRELHLHGTAIQDLPSSIE 1225

Query: 565  LLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLD- 623
             L GL  L+L +C+ L  LP  + NLK L++L + GCSKL K P+ + S++ L  L    
Sbjct: 1226 NLKGLEFLDLASCKKLVTLPTHICNLKSLKTLHVYGCSKLNKLPKSLGSLQCLEHLDAGC 1285

Query: 624  -GTSIKEVPSSIELLTKLELLNLSDCKNLVR--LPSSIIALKSLKTLNLSGC 672
             G+    +P S   L  L +L+L+   NL++  +   I  L SL+ L+L+ C
Sbjct: 1286 LGSIAPPLP-SFSGLCSLRILHLNGL-NLMQWSIQDDICRLYSLEVLDLTNC 1335


>gi|255578414|ref|XP_002530072.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223530425|gb|EEF32312.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1135

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 360/1031 (34%), Positives = 510/1031 (49%), Gaps = 176/1031 (17%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            ++S  +++  L++  S DV M+GICG GG+GKTTIA+ +Y+ I+++FE S FL+NVR+ +
Sbjct: 190  LESHAKEVMSLLNPSSKDVWMVGICGTGGIGKTTIAKAIYNKIANQFEGSCFLENVRK-T 248

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
             +   V LQ  LL ++L   +  + N   GI+ +  RL  K+VL+VIDDV  V QL+ LA
Sbjct: 249  PEECFVQLQESLLIEVLGDKNIFVGNFSRGINCIKDRLCSKRVLIVIDDVDHVDQLKKLA 308

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
                 FG+GSRIIIT+RDE LL  HGV  ++K + L  ++AL LF+  AFK  QP ++ +
Sbjct: 309  A-VNGFGAGSRIIITTRDERLLVEHGVKSIHKINELCPNDALVLFSWNAFKNPQPAEDYM 367

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            +LS  I+ YA GLPLAL VLGSFL  R+V EW S + +L+  P   I ++L+IS+DGL  
Sbjct: 368  ELSQWIVNYAKGLPLALVVLGSFLYKRAVPEWESEIAKLKRNPNKHIYEMLKISYDGLDG 427

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             EK IFLDIACFFKG D+D V   L+ C F+PVIG++VLIEK LI++ NN + MH LLQ 
Sbjct: 428  NEKAIFLDIACFFKGMDKDVVLKILDACDFNPVIGVQVLIEKSLISIENNKIQMHALLQS 487

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G+Q+V  QSP+   KRSRLW  E+V  VLT + G +  EGI+LD    E E+ L  SA 
Sbjct: 488  MGRQVVCEQSPKP-NKRSRLWLHEDVLAVLTGNKGNDDTEGILLDLPKPE-EIQL--SAD 543

Query: 361  AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
            AF KM +LR+L I N  +  G   L N LR L W   PL  +PS     K + + M  S 
Sbjct: 544  AFIKMKSLRILLIRNAHITGGPFDLPNGLRWLEWPACPLLSMPSGFCARKLVGLNMHRSY 603

Query: 421  IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
            I E  +  K+                                               +N 
Sbjct: 604  IREFGEEFKN-----------------------------------------------YNL 616

Query: 481  LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
            L  ++++DC  L   P    + +LE+LNL      +                     E+ 
Sbjct: 617  LKFIDLRDCEFLTGTPDFSAIPNLERLNLGGCSKLV---------------------EVH 655

Query: 541  EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
            + + +L++L              E LS     NLKN      LP T      LR+L L+G
Sbjct: 656  QSVGNLAKL--------------EFLSFEFCFNLKN------LPSTFKLRS-LRTLLLTG 694

Query: 601  CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
            C KL+ FPEIV  +K L +L L  T+IK +PSSI  LT L++L L+ CKNL  LP  I  
Sbjct: 695  CQKLEAFPEIVGEIKWLEKLSLTKTAIKGLPSSIANLTGLKVLTLTYCKNLTYLPHGIYK 754

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK 720
            L+ LK L L GC  L   P       SL                                
Sbjct: 755  LEQLKCLFLEGCSMLHEFPANPNGHSSL-------------------------------- 782

Query: 721  LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLN 780
                 G    R L+L +CNL +     +      LK+L LS N FVSLP      + L +
Sbjct: 783  -----GFPKFRCLDLRNCNLPDITFLKEHNCFPMLKDLDLSGNDFVSLPPYFHLFNNLRS 837

Query: 781  IELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDST-------MIACLDSL 833
            ++L  C ++Q +P+LP  I++V    C SL       ++ K +          I   +  
Sbjct: 838  LKLSKCMKVQEIPELPLYIKRVEARDCESLERFPQLARIFKCNEEDRPNRLHDIDFSNCH 897

Query: 834  KLLGNKSLAFSMLREYLEAV---SNTRQHL--SVVVPGSEIPEWFMYQNEGSSITVTRPS 888
            KL  N+S       ++LE        RQ L   + +PGSEIP+WF Y++E  S++   PS
Sbjct: 898  KLAANES-------KFLENAVLSKKFRQDLRIEIFLPGSEIPKWFSYRSEEDSLSFQLPS 950

Query: 889  NLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSD 948
                + + +   I C    +K+    N      + Q+     +G   I F  +F    S+
Sbjct: 951  RECERIRAL---ILCAILSIKDGETVNI-----SRQV---FINGQNVIMFSRQFFSLESN 999

Query: 949  HLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQ--GLEVKMCGLHPVYMDEV 1006
            H+WL YL R+    + L    ++      H  VSF+  LG   G  +K CG   VY+  V
Sbjct: 1000 HVWLYYLPRRFIRGLHLKQNGDV------HFEVSFKV-LGATMGSTLKSCG---VYL--V 1047

Query: 1007 EELDQTTNQPS 1017
             + D+  + PS
Sbjct: 1048 SKQDEIVDDPS 1058


>gi|359496034|ref|XP_002277500.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1132

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 289/698 (41%), Positives = 406/698 (58%), Gaps = 57/698 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           + S+  ++  L+ + S+DVRM+GI GMGG+GKTT+A+ +Y+ +S +FE   +L++  E  
Sbjct: 189 IGSQIREMELLLCTESTDVRMVGIWGMGGIGKTTLAQAIYNQVSSQFEGCSYLEDAGEDL 248

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            K GL+ LQ +LLSQ+L   +  +    +G   L +RL  ++V +V+D+V D   L+ L 
Sbjct: 249 RKRGLIGLQEKLLSQILGHENIKL----NGPISLKARLCSREVFIVLDNVYDQDILECLV 304

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G+ +WFG GSRIIIT+RD+ LL +HGV  VY+   L + EA++     A K    + E +
Sbjct: 305 GSHDWFGQGSRIIITTRDKRLLMSHGVRVVYEVKKLVHTEAIEFLGRYASKQQIVIDEFM 364

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS  II YA GLPL L+VLGSFL   S  EWRS L++L+  P   I ++L+IS+DGL +
Sbjct: 365 ELSNSIITYAQGLPLVLKVLGSFLFSMSKHEWRSELDKLKDTPHGRIQEVLRISYDGLDD 424

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWMHDLLQ 299
            EK IFLDIACFFKG D+D+V   L+GCGF  V GIR LI+K LIT+ NN  + MHDLLQ
Sbjct: 425 KEKNIFLDIACFFKGEDKDHVIKILDGCGFFAVCGIRGLIDKSLITISNNDKIVMHDLLQ 484

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G++I+++ SP+E GKRSRLW  ++  HVL+++TGT+ VEGI   N     E++   + 
Sbjct: 485 EMGRKIIRQTSPKEPGKRSRLWIYKDAYHVLSKNTGTQEVEGIFF-NLSDIEEIHF--TT 541

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           KAF+ M  LRLLK  +       E  S R   L     P  F P NL     +++ +  S
Sbjct: 542 KAFAGMDKLRLLKFYDYSPSTNSECTSKRKCKL-----PHDFSPKNL-----VDLSLSCS 591

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
            + +LWKGIK LDKLK M LSHS+ L+  P+F+G  NLEKL L GCT L E+HP+L +  
Sbjct: 592 DVKQLWKGIKVLDKLKFMDLSHSKYLVETPNFSGISNLEKLDLTGCTYLREVHPTLGVLG 651

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
           KL  L+++DC                   LK++P +I  LK L T   SG  K   FPE 
Sbjct: 652 KLSFLSLRDCKM-----------------LKNIPNSICKLKSLETFIFSGCSKVENFPEN 694

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRS------LEILPVTVSNLKCL 593
             ++E L EL+ + TAI  LP SI  L  L +L+   C+       L +LP   SN    
Sbjct: 695 FGNLEQLKELYADETAISALPSSICHLRILQVLSFNGCKGPPSASWLTLLPRKSSNSGKF 754

Query: 594 RSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP--SSIELLTKLELLNLSDCKNL 651
               LSG   LK             EL L   +I E    S + +L+ LE L+LS   N 
Sbjct: 755 LLSPLSGLGSLK-------------ELNLRDCNISEGADLSHLAILSSLEYLDLSG-NNF 800

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLE 689
           + LPSS+  L  L +L L  C +L+ + E    I+ ++
Sbjct: 801 ISLPSSMSQLSQLVSLKLQNCRRLQALSELPSSIKEID 838



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 167/522 (31%), Positives = 250/522 (47%), Gaps = 99/522 (18%)

Query: 544  EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            ++L +L L  + ++ L   I++L  L  ++L + + L   P   S +  L  L L+GC  
Sbjct: 581  KNLVDLSLSCSDVKQLWKGIKVLDKLKFMDLSHSKYLVETP-NFSGISNLEKLDLTGC-- 637

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
                                 T ++EV  ++ +L KL  L+L DCK L  +P+SI  LKS
Sbjct: 638  ---------------------TYLREVHPTLGVLGKLSFLSLRDCKMLKNIPNSICKLKS 676

Query: 664  LKTLNLSGCFKLENVPETLGQIESLEELDISGTAV-----------------------PH 700
            L+T   SGC K+EN PE  G +E L+EL    TA+                       P 
Sbjct: 677  LETFIFSGCSKVENFPENFGNLEQLKELYADETAISALPSSICHLRILQVLSFNGCKGPP 736

Query: 701  STSWYSYIPINLMRKSV---ALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKE 757
            S SW + +P    RKS       L  LSGL SL++LNL DCN+ EGA  S +  L SL+ 
Sbjct: 737  SASWLTLLP----RKSSNSGKFLLSPLSGLGSLKELNLRDCNISEGADLSHLAILSSLEY 792

Query: 758  LYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLD-A 816
            L LS N+F+SLP+S++ LS+L++++L++C+RLQ+L +LP +I+++  + C SL T+ + +
Sbjct: 793  LDLSGNNFISLPSSMSQLSQLVSLKLQNCRRLQALSELPSSIKEIDAHNCMSLETISNRS 852

Query: 817  LKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQ----------HLSVVVPG 866
            L       +   CL       N       L  +L+    +R             S VVPG
Sbjct: 853  LFPSLRHVSFGECLKIKTYQNNIGSMLQALATFLQTHKRSRYARDNPESVTIEFSTVVPG 912

Query: 867  SEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSY-PTHQ- 924
            SEIP+WF YQ+ G+ + +  P N +N    +G+A+  VF       G +    Y P H+ 
Sbjct: 913  SEIPDWFSYQSSGNVVNIELPPNWFN-SNFLGFALSAVF-------GFDPLPDYNPNHKV 964

Query: 925  --LNCHIGHGIYGIGFRDKF-----GQA--GSDHLWLLYLSRQTCYDIRLPLESNLEPFE 975
              L C          +RD       G A   SDHLWL Y           P+ S+ +  E
Sbjct: 965  FCLFCIFSFQNSAASYRDNVFHYNSGPALIESDHLWLGY----------APVVSSFKWHE 1014

Query: 976  SNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEELDQTTNQPS 1017
             NH   +F+ + G+   VK CG+H VY  E    D + N P+
Sbjct: 1015 VNHFKAAFQIY-GRHFVVKRCGIHLVYSSE----DVSDNNPT 1051


>gi|359473398|ref|XP_002268324.2| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Vitis
            vinifera]
          Length = 1378

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 355/1043 (34%), Positives = 519/1043 (49%), Gaps = 174/1043 (16%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
            +DSR E+L  L+D  S+  R++G  GMGG+GKTT+A+ +Y+ +   FE   F+ NV+E  
Sbjct: 193  LDSRIEELLNLLDLKSNCTRVLGFHGMGGVGKTTLAKALYNKLVAHFECRSFISNVKETL 252

Query: 60   --SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
                +  L+SL  +L++ L     + +  V  G+  +   +  K+VLLV+DDV D  QL+
Sbjct: 253  AQQDEDSLLSLHNKLINDLSMSEASPVSEVNAGLVAIRRIMHEKRVLLVMDDVDDASQLE 312

Query: 118  SLAGNREW---FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
             + G R+W   F  GSRIIIT+RD  +L+    +E+++  GLN+ E+LQLF+  A +  +
Sbjct: 313  VVIGRRKWRQFFYGGSRIIITTRDRGVLRDLHENELFEVQGLNFSESLQLFSYHALRREK 372

Query: 175  PLQECVQLSARIIRYAGGLPLALEVLGSFL-SGRSVDEWRSTLERLEIEPPSEILDILQI 233
            P ++   LS  I+   GGLPLALEV GSFL   R + EW   L++L+   PS + D+L+I
Sbjct: 373  PTEDFWNLSNEIVSLTGGLPLALEVFGSFLYDKRIIKEWEDALQKLKQIRPSNLQDVLKI 432

Query: 234  SFDGLQELEKKIFLDIACFFKGN--DRDYVTNFLEGCGFHPVIGIRVLIEKCLI-TVHNN 290
            SFDGL E EK IFLDIACFF      R+   + L+GCGF   I I+VL EK LI T  + 
Sbjct: 433  SFDGLDEQEKDIFLDIACFFVKMRLKREDAIDILKGCGFRADITIKVLTEKSLIKTYEDG 492

Query: 291  TLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIV------- 343
             LWMHD L+++G+QIVQ ++P + G RSRLW   EV  VL + TGT  ++GIV       
Sbjct: 493  ILWMHDQLRDMGKQIVQHENPSDPGSRSRLWDHNEVMSVLQDQTGTRSIQGIVPEFKKKD 552

Query: 344  ----------LDNYHH--------------------ENEVYLCASAKAFSKMTNLRLLKI 373
                      L   H                     + E  +    K+F  M  LRLL+I
Sbjct: 553  ASPESSSQNSLQTKHKFTRAILPLKKTIKERFHPKADKERVMLLCTKSFQPMVTLRLLQI 612

Query: 374  CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELW--KGIKHL 431
             ++QL    + + + L+ L W+G PLK LPS     K   + +  S+I  +W     K  
Sbjct: 613  NHVQLGGNFKNIPSELKWLQWKGCPLKTLPSTFCPRKLTVLDLSESKIERVWGCHNKKVA 672

Query: 432  DKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL-----LLHNKLI---- 482
            + L VM LS   +L  +PD +G   LEKLILE C  L  IH S+     LLH  L+    
Sbjct: 673  ENLMVMNLSGCNSLTDLPDVSGHQTLEKLILERCLSLVTIHKSVGDLRTLLHLNLMGCSN 732

Query: 483  ---------------ILNMKDCTSL-----------------------ITLPGKIL-MKS 503
                           I N+  CT L                       + LP  I  +K 
Sbjct: 733  LLEFPSDVSGLRHLEIFNLSGCTKLKELPEDMSSMTSLRELLVDKTAIVNLPDSIFRLKK 792

Query: 504  LEKLNL------KSLPTTISGLKCLSTLDVSGD--------------------LKFR--- 534
            LEK +L      K LP  I  L  L  L ++G                     ++ R   
Sbjct: 793  LEKFSLDSCSSLKQLPDCIGRLSSLRELSLNGSGLEELPDSIGSLTNLERLSLMRCRLLS 852

Query: 535  EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVT-------- 586
              P+ V  +  L EL +  ++I+ LP SI  LS L  L+L +CRSL  LP +        
Sbjct: 853  AIPDSVGRLRSLIELFICNSSIKELPASIGSLSQLRYLSLSHCRSLIKLPDSIEGLVSLA 912

Query: 587  ---------------VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP 631
                           V +L  L +L++  C     FPEI  +M  L+ L LD + I E+P
Sbjct: 913  RFQLDGTLLTGVPDQVGSLNMLETLEMRNCEIFSSFPEI-NNMSSLTTLILDNSLITELP 971

Query: 632  SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
             SI  L +L +L L++CK L RLP+SI  LK+L +L ++     E +PE  G + +L  L
Sbjct: 972  ESIGKLERLNMLMLNNCKQLQRLPASIRKLKNLCSLLMTRTAVTE-LPENFGMLSNLRTL 1030

Query: 692  DISGTAVPHSTSWYSYIPINLMR---KSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSD 748
             ++    P +T  ++ +   +++   K V L L S S L  L++L+     +  G++ SD
Sbjct: 1031 KMAKHPDPEATGEHTELTNLILQENPKPVVL-LMSFSNLFMLKELDARAWKI-SGSI-SD 1087

Query: 749  IGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCA 808
               L SL++L L  N+F SLP+S+  LS L N+ L  CK + SLP LP ++ ++ V+ C 
Sbjct: 1088 FEKLSSLEDLNLGHNNFCSLPSSLQGLSVLKNLFLPHCKEINSLPPLPSSLIKLNVSNCC 1147

Query: 809  SLVTLLDALKL----------CKS--DSTMIACLDSLKLL--GNKSLAFSMLREYLEAVS 854
            +L ++ D   L          CK   D   + CL SLK       +     L+  +  V+
Sbjct: 1148 ALQSVSDLSNLKSLEDLNLTNCKKIMDIPGLQCLKSLKRFYASGCNACLPALKSRITKVA 1207

Query: 855  NTRQHL-SVVVPGSEIPEWFMYQ 876
               +HL ++ VPGSEIP WF+ +
Sbjct: 1208 --LKHLYNLSVPGSEIPNWFVQE 1228


>gi|317415953|emb|CAR94518.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 2041

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 305/748 (40%), Positives = 438/748 (58%), Gaps = 73/748 (9%)

Query: 15  GSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLS 74
           GS +VR+IGICGM G+GK+T+A+ +   I  +F+A  F+  V EIS K GL  ++ QL  
Sbjct: 221 GSEEVRVIGICGMPGIGKSTVAKALSQRIRSQFDAISFISKVGEISKKEGLFHIKEQLCD 280

Query: 75  QLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAG-------NREWFG 127
            LL   D  +    D  D++  RL+ K+VL+++D+V +++Q++++AG       NR  FG
Sbjct: 281 HLL---DKKV-TTKDVDDVICKRLRDKRVLIILDNVDELEQIEAVAGSDGAGLSNR--FG 334

Query: 128 SGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARII 187
            GSRII+T+ DE LL  +   E+Y    L  D+AL LF  KA KT  P     +LS   +
Sbjct: 335 KGSRIIVTTTDERLLIDYN-PEIYTIEKLTPDQALLLFCRKALKTDHPTDAFKKLSNEFV 393

Query: 188 RYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPS---EILDILQISFDGLQELEKK 244
            Y  G PLALEV G  L  R  D W + L+ L+ +  S   +I+ +L+ SFDGL+  E++
Sbjct: 394 DYIDGHPLALEVFGHSLWKREEDYWSTKLKSLKDKGYSGEKKIIGVLKASFDGLENQEQQ 453

Query: 245 -IFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQ 303
            +FLD ACFFKG D   +    E CG++P I I +L EK L+++    LWMHDLLQ++G+
Sbjct: 454 DMFLDTACFFKGEDVCRLEKIFESCGYYPGINITILCEKSLVSIVGGRLWMHDLLQKMGR 513

Query: 304 QIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFS 363
            +V  +S +E G+RSRLW   +   VL ++ GT+ V+GI L +    ++V+L      FS
Sbjct: 514 GLVLGESKKE-GERSRLWHHTDALPVLKKNKGTDAVQGIFL-SLPQPDKVHL--KKDPFS 569

Query: 364 KMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM-CYSRIG 422
            M NLRLLKI N++    LEYLS+ L LL W   PLK LPS+ + DK +E+ +       
Sbjct: 570 NMDNLRLLKIYNVEFSGSLEYLSDELSLLEWHKCPLKSLPSSFEPDKLVELNLSESEIEE 629

Query: 423 ELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLI 482
              +  + L+KL V+ LS  + LI+ PDF   PNLE+LIL+G                  
Sbjct: 630 LWEEIERPLEKLAVLNLSDCQKLIKTPDFDKVPNLEQLILKG------------------ 671

Query: 483 ILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEH 542
                 CTSL  +P  I        NL+SL   I          +SG  K ++ PEI E 
Sbjct: 672 ------CTSLSAVPDDI--------NLRSLTNFI----------LSGCSKLKKLPEIGED 707

Query: 543 MEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP-VTVSNLKCLRSLKLSGC 601
           M+ L +LHL+GTAI  LP SI+ L+GL LLNL++C++L  LP V  ++L  L+ L +SGC
Sbjct: 708 MKQLRKLHLDGTAIEELPTSIKHLTGLTLLNLRDCKNLLSLPDVICTSLTSLQILNVSGC 767

Query: 602 SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA- 660
           S L + PE + S++ L EL+   T+I+E+P+SI+ LT L LLNL +CKNL+ LP  I   
Sbjct: 768 SNLNELPENLGSLECLQELYASRTAIQELPTSIKHLTDLTLLNLRECKNLLTLPDVICTN 827

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA---VPHSTSWYSYIPINLMRKSV 717
           L SL+ LNLSGC  L  +PE LG ++ L++L  S TA   VP S S  S +   L+    
Sbjct: 828 LTSLQILNLSGCSNLNELPENLGSLKCLKDLYASRTAISQVPESISQLSQLE-ELVLDGC 886

Query: 718 ALKLPSLSGL-CSLRKLNLTDCNLMEGA 744
           ++ L SL GL  S+R +++ +C L++GA
Sbjct: 887 SM-LQSLPGLPFSIRVVSVQNCPLLQGA 913



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 159/443 (35%), Positives = 230/443 (51%), Gaps = 26/443 (5%)

Query: 481  LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
            L I N++   SL  L  ++ +    K  LKSLP++    K L  L++S       + EI 
Sbjct: 577  LKIYNVEFSGSLEYLSDELSLLEWHKCPLKSLPSSFEPDK-LVELNLSESEIEELWEEIE 635

Query: 541  EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
              +E L+ L+L            + +  L  L LK C SL  +P  + NL+ L +  LSG
Sbjct: 636  RPLEKLAVLNLSDCQKLIKTPDFDKVPNLEQLILKGCTSLSAVPDDI-NLRSLTNFILSG 694

Query: 601  CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSI-I 659
            CSKLKK PEI   MK L +L LDGT+I+E+P+SI+ LT L LLNL DCKNL+ LP  I  
Sbjct: 695  CSKLKKLPEIGEDMKQLRKLHLDGTAIEELPTSIKHLTGLTLLNLRDCKNLLSLPDVICT 754

Query: 660  ALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIP----INLMRK 715
            +L SL+ LN+SGC  L  +PE LG +E L+EL  S TA+    +   ++     +NL   
Sbjct: 755  SLTSLQILNVSGCSNLNELPENLGSLECLQELYASRTAIQELPTSIKHLTDLTLLNLREC 814

Query: 716  SVALKLPSL--SGLCSLRKLNLTDC-NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSI 772
               L LP +  + L SL+ LNL+ C NL E  LP ++G+L  LK+LY S+ +   +P SI
Sbjct: 815  KNLLTLPDVICTNLTSLQILNLSGCSNLNE--LPENLGSLKCLKDLYASRTAISQVPESI 872

Query: 773  THLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL-------VTLLDALK----LCK 821
            + LS+L  + L+ C  LQSLP LP +IR V V  C  L       +T+  +      L +
Sbjct: 873  SQLSQLEELVLDGCSMLQSLPGLPFSIRVVSVQNCPLLQGAHSNKITVWPSAAGFSFLGR 932

Query: 822  SDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSS 881
              +  I        L +K L +   + + E      +        +EIP W   ++  S+
Sbjct: 933  QGNNDIG---QAFWLPDKHLLWPFYQTFFEGAIQRGEMFEYGYRSNEIPAWLSRRSTEST 989

Query: 882  ITVTRPSNLYNKKKLVGYAICCV 904
            IT+  P +L  K K +  A+C V
Sbjct: 990  ITIPLPHDLDGKNKWIKLALCFV 1012



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 5/150 (3%)

Query: 865  PGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGN-NCFGSYPTH 923
            P S   EWF  Q+ GSSI V  P +LY+    +G+A+C  F +++N   + +      +H
Sbjct: 1671 PSSITLEWFGDQSSGSSIRVPLPPHLYSATNWIGFALCASFSIMENPTADLDNLNPEISH 1730

Query: 924  QLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSR-QTCYDIRLPLESNLEPFESNHVNVS 982
             L CH+      I     +     +  WL +       Y  R+     L   E + +  S
Sbjct: 1731 HLICHLESDRGTIEPLHDYCTTNEEFQWLPFGGFIWVSYIPRVWFSDQLN--ECDILEAS 1788

Query: 983  FEPWLGQGLEVKMCGLHPVYMDEVEELDQT 1012
            F     +   V  CGL  VY  + EE+ QT
Sbjct: 1789 FAS-DHEAFIVHECGLRLVYQHDEEEIKQT 1817



 Score = 50.1 bits (118), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 24/160 (15%)

Query: 865  PGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGN-NCFGSYPTH 923
            P +EI EWF +Q+ G S+ +  PSNL      +G A+C  F V+ +S  + +      +H
Sbjct: 1461 PPNEIVEWFGHQSSGPSVKIPLPSNLCEDTNWIGLALCAYFSVIDHSTTDLDNLNPEISH 1520

Query: 924  QLNCHI-----------GHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLE 972
             L C +           G+      F   +   G   +WL Y+ R  C+       + L+
Sbjct: 1521 NLTCLLETDESCLESLHGYCTNSQEFEWLYCMGG--FIWLSYIPR--CW-----FSNQLK 1571

Query: 973  PFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEELDQT 1012
              E  H+  S     G  L V  CGL  +Y+++ E L +T
Sbjct: 1572 --ERGHLEASIGSDRG-SLGVHRCGLRLIYLEDEEGLKET 1608



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 72/186 (38%), Gaps = 17/186 (9%)

Query: 833  LKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYN 892
            LK LG  S  F      L ++ N+        P S   EWF  Q+  SS T+  P NL  
Sbjct: 1855 LKRLGRPSWDFD-----LHSIYNS------CFPSSITLEWFGRQSNDSSATILLPHNLNL 1903

Query: 893  KKKLVGYAICCVFHVLKNSRGNNCFGSYP--THQLNCHIGHGIYGIGFRDKFGQAGSDHL 950
                +G A+C  F VL++   +      P  +H L C++      +     +     + L
Sbjct: 1904 DSNWIGLAVCAYFSVLEHPTVDIDNLDIPAISHHLICNLESDRDSLESLHDYCTTNEEFL 1963

Query: 951  WLLYLS-RQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEEL 1009
            WL +       Y  R      L        +++ +    +   V+ CGL  VY  + EE 
Sbjct: 1964 WLHFGGFVWVSYIPRAWFSDQLNECGVLEASIASD---HEAFSVQKCGLRLVYQHDEEEF 2020

Query: 1010 DQTTNQ 1015
             QT ++
Sbjct: 2021 KQTISR 2026


>gi|105922831|gb|ABF81439.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1178

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 257/527 (48%), Positives = 353/527 (66%), Gaps = 27/527 (5%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVREI-SSKGGLVSLQRQLLSQLLKLADNSIWNVFDG 90
           KTT+ARV+YD I  +FE S FL NVRE+ + K G   LQ QLLS++L +   S+W+ F G
Sbjct: 364 KTTVARVLYDRIRWQFEGSCFLANVREVFAEKDGPRRLQEQLLSEIL-MERASVWDSFRG 422

Query: 91  IDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDE- 149
           I M+  RL+ KK+LL++DDV D +QL+ LA    WFG GSRIIITSR  ++L   G+D+ 
Sbjct: 423 ILMIKRRLRLKKILLILDDVDDKEQLEFLAEEPGWFGPGSRIIITSRHSNVLT--GIDDT 480

Query: 150 -VYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRS 208
            +Y+   LN D+AL LF+ KAFK  QP ++ V LS +++ YA GLPLALEV+GSFL GRS
Sbjct: 481 KIYEAEKLNDDDALMLFSQKAFKNDQPAEDFVGLSKQVVDYANGLPLALEVIGSFLYGRS 540

Query: 209 VDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGC 268
           + EWR  + R+   P  +I+D+L+ISFDGL E ++KIFLDIACF KG  +D +T  L+ C
Sbjct: 541 IPEWRGAINRMNEIPDGKIIDVLRISFDGLHESDQKIFLDIACFLKGFKKDRITRILDRC 600

Query: 269 GFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCH 328
           GF+  IGI VLIE+ LI+V+ + +WMH+LLQ +G++IV+ +SPEE G+RSRLW  E+VC 
Sbjct: 601 GFNASIGIPVLIERSLISVYRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYEDVCL 660

Query: 329 VLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNR 388
            L ++TG E +E I LD    +   +   + KAFSKM+ LRLLKI N+Q+  G E LSN+
Sbjct: 661 ALMDNTGKEKIEAIFLDMPGIKEAQW---NMKAFSKMSKLRLLKIDNMQVSEGPEDLSNK 717

Query: 389 LRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRM 448
           LR L W   P K LP++LQ+D+ +E++M  S + +LW G K    LK++ LS+S NLI+ 
Sbjct: 718 LRFLEWHSCPSKSLPADLQVDELVELHMANSSLEQLWYGCKSAVNLKIINLSNSLNLIKT 777

Query: 449 PDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN 508
           PDFTG  NLE LILEGCT L+E+HPSL  H KL  +N+ +C  +  LP  + M+SL+   
Sbjct: 778 PDFTGILNLENLILEGCTSLFEVHPSLAHHKKLQYVNLVNCKRIRILPNNLEMESLK--- 834

Query: 509 LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTA 555
                       C+    + G  K  +FP+I  +M  L EL+L+GT 
Sbjct: 835 -----------VCI----LDGCSKLEKFPDIGGNMNCLMELYLDGTG 866



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 10/161 (6%)

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNL--KSLPTTISGLKC---LSTLDVSGDL 531
           L NKL  L    C S  +LP  + +  L +L++   SL     G K    L  +++S  L
Sbjct: 714 LSNKLRFLEWHSCPSK-SLPADLQVDELVELHMANSSLEQLWYGCKSAVNLKIINLSNSL 772

Query: 532 KFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
              + P+    + +L  L LEG T++  +  S+     L  +NL NC+ + ILP  +  +
Sbjct: 773 NLIKTPDFTGIL-NLENLILEGCTSLFEVHPSLAHHKKLQYVNLVNCKRIRILPNNLE-M 830

Query: 591 KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP 631
           + L+   L GCSKL+KFP+I  +M  L EL+LDGT   E+P
Sbjct: 831 ESLKVCILDGCSKLEKFPDIGGNMNCLMELYLDGTG-NEIP 870



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 102/448 (22%), Positives = 174/448 (38%), Gaps = 123/448 (27%)

Query: 617  LSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
            +  +FLD   IKE   +++  +K+  L L    N+            L+ L    C   +
Sbjct: 671  IEAIFLDMPGIKEAQWNMKAFSKMSKLRLLKIDNMQVSEGPEDLSNKLRFLEWHSC-PSK 729

Query: 677  NVPETLGQIESLEELDISGTAVPHSTSWY---SYIPINLMRKSVAL---KLPSLSGLCSL 730
            ++P  L Q++ L EL ++ +++     WY   S + + ++  S +L   K P  +G+ +L
Sbjct: 730  SLPADL-QVDELVELHMANSSLEQL--WYGCKSAVNLKIINLSNSLNLIKTPDFTGILNL 786

Query: 731  RKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQ 790
              L L  C                         S   +  S+ H  KL  + L +CKR++
Sbjct: 787  ENLILEGCT------------------------SLFEVHPSLAHHKKLQYVNLVNCKRIR 822

Query: 791  SLPQ--LPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLRE 848
             LP      +++   ++GC+ L    D           + CL  L L G           
Sbjct: 823  ILPNNLEMESLKVCILDGCSKLEKFPDI-------GGNMNCLMELYLDGT---------- 865

Query: 849  YLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFH-- 906
                             G+EIP WF +Q++GSSI+V  P+        +G+  C  F   
Sbjct: 866  -----------------GNEIPGWFNHQSKGSSISVQVPN------WSMGFVACVAFSAY 902

Query: 907  ----VLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYD 962
                +L+     N   +YP+  L C   + I          Q  SDHLWL YLS     +
Sbjct: 903  GERPLLRCDFKANGRENYPS--LMCISLNSI----------QLLSDHLWLFYLSFDYLKE 950

Query: 963  IRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCG---LHPVYMDEVEELDQTTNQPSRF 1019
            ++     +      +++ +SF  +  + ++VK CG   L  +Y+         T+QPS  
Sbjct: 951  VKEWKHGSF-----SNIELSFHSY-KRRVKVKNCGVCLLSSIYI---------TSQPS-- 993

Query: 1020 TVYNLNEFDQHFVGSKMIVATTSKRSLT 1047
                      HF+ +    A++ K SL 
Sbjct: 994  ---------AHFIVTSKEAASSYKASLA 1012



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 15/199 (7%)

Query: 530 DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSN 589
           +++  E PE + +     E H      + LP  +++   LV L++ N  SLE L     +
Sbjct: 704 NMQVSEGPEDLSNKLRFLEWH--SCPSKSLPADLQV-DELVELHMANS-SLEQLWYGCKS 759

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDC 648
              L+ + LS    L K P+    + +L  L L+G TS+ EV  S+    KL+ +NL +C
Sbjct: 760 AVNLKIINLSNSLNLIKTPDFT-GILNLENLILEGCTSLFEVHPSLAHHKKLQYVNLVNC 818

Query: 649 KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA--VPHSTSWYS 706
           K +  LP+++  ++SLK   L GC KLE  P+  G +  L EL + GT   +P    W++
Sbjct: 819 KRIRILPNNL-EMESLKVCILDGCSKLEKFPDIGGNMNCLMELYLDGTGNEIP---GWFN 874

Query: 707 YIPINLMRKSVALKLPSLS 725
           +        S+++++P+ S
Sbjct: 875 H---QSKGSSISVQVPNWS 890


>gi|147784070|emb|CAN72303.1| hypothetical protein VITISV_009715 [Vitis vinifera]
          Length = 1135

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 280/697 (40%), Positives = 393/697 (56%), Gaps = 84/697 (12%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D+R +++   +  GS D  M+GI GMGG+GKTT+AR +Y  I+ +FEA  F +NV E  
Sbjct: 193 IDARMQEIEMRLCLGSDDFLMVGIWGMGGIGKTTLARAIYRKITCQFEACCFFENVGEDL 252

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +K GL+ LQ++ L+QLL+  + ++         +  RL  KK                  
Sbjct: 253 AKEGLIGLQQKFLAQLLEEPNLNM----KAXTSIKGRLHSKK------------------ 290

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
              +WFG GSRIIIT+RD+ LL +HGV   Y+    NYDEA +     + K   P  + +
Sbjct: 291 ---DWFGRGSRIIITTRDKXLLISHGVLNYYEAQRFNYDEAXEFLTPYSLKHKIPXDDFM 347

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           ++S  +I YA GLPLALEVLGSFL   + +EWR+ L++L+  P  +I ++L++S+DGL +
Sbjct: 348 EVSKEVIGYAQGLPLALEVLGSFLFSMTKEEWRNQLDKLKSTPNMKIQEVLKVSYDGLDD 407

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQ 299
            EK I LDIACFFKG D+DYV   L+GCGF  + GIR LI+K L+T+  +N J MHDL+Q
Sbjct: 408 KEKNIXLDIACFFKGEDKDYVMEILDGCGFFSLSGIRALIDKSLVTISWSNEJMMHDLIQ 467

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G++IV++QS  E GKRSRLW  E++  VL ++T TE +EGI L+  H E  +Y   + 
Sbjct: 468 EMGREIVRQQSLXEPGKRSRLWFHEDINXVLKKNTATEKIEGIFLNLSHLEEMLYF--TT 525

Query: 360 KAFSKMTNLRLLKI------------------CNLQLPNGLEYLSNRLRLLGWRGYPLKF 401
           +A ++M  LRLLK+                  C +      ++  + LR L + GY LK 
Sbjct: 526 QALARMNRLRLLKVYNSKNISRNFKDTSNMENCKVNFSKDFKFCYHDLRCLYFYGYSLKS 585

Query: 402 LPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLI 461
           LP++      IE+ M YSRI +LWKGI  L  LK M LSHS+ LI  P+F G  NL++L+
Sbjct: 586 LPNDFNPKNLIELSMPYSRIKQLWKGIXVLANLKFMDLSHSKYLIETPNFRGVTNLKRLV 645

Query: 462 LEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKC 521
           LEGC  L ++H SL     LI LN+K+C                   LKSLP++   LK 
Sbjct: 646 LEGCVSLRKVHSSLGDLKNLIFLNLKNCQM-----------------LKSLPSSTCDLKS 688

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCR--- 578
           L T  +SG  KF+EFPE    +E L EL+ +  AI  LP S   L  L +L+ K C+   
Sbjct: 689 LETFILSGCSKFKEFPENFGSLEMLKELYXDEIAIGVLPSSFSFLRNLQILSFKGCKGPS 748

Query: 579 -SLEILPVTVSN-----------LKCLRSLKLSGCSKLKKFPE--IVRSMKDLSELFLDG 624
            +L +LP   SN           L+ L  L LS C+ L   P    +  +  L EL+L G
Sbjct: 749 STLWLLPRRSSNSIGSILQPLSGLRSLIRLNLSNCN-LSDEPNLSSLGFLSSLEELYLGG 807

Query: 625 TSIKEVPSSIELLTKLELLNLSDCKNLV---RLPSSI 658
                +PS+I  L+ L LL L +CK L     LPSSI
Sbjct: 808 NDFVTLPSTISQLSNLTLLGLENCKRLQVLPELPSSI 844



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 164/569 (28%), Positives = 251/569 (44%), Gaps = 71/569 (12%)

Query: 549  LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
            L+  G +++ LP        L+ L++   R ++ L   +  L  L+ + LS    L + P
Sbjct: 576  LYFYGYSLKSLPNDFNP-KNLIELSMPYSR-IKQLWKGIXVLANLKFMDLSHSKYLIETP 633

Query: 609  EIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL 667
               R + +L  L L+G  S+++V SS+  L  L  LNL +C+ L  LPSS   LKSL+T 
Sbjct: 634  NF-RGVTNLKRLVLEGCVSLRKVHSSLGDLKNLIFLNLKNCQMLKSLPSSTCDLKSLETF 692

Query: 668  NLSGCFKLENVPETLGQIESLEEL---DISGTAVPHSTSWYSYIPINLMR---------- 714
             LSGC K +  PE  G +E L+EL   +I+   +P S S+   + I   +          
Sbjct: 693  ILSGCSKFKEFPENFGSLEMLKELYXDEIAIGVLPSSFSFLRNLQILSFKGCKGPSSTLW 752

Query: 715  -------KSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS 767
                    S+   L  LSGL SL +LNL++CNL +    S +G L SL+ELYL  N FV+
Sbjct: 753  LLPRRSSNSIGSILQPLSGLRSLIRLNLSNCNLSDEPNLSSLGFLSSLEELYLGGNDFVT 812

Query: 768  LPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL----VTLLDAL------ 817
            LP++I+ LS L  + LE+CKRLQ LP+LP +I  +    C SL      +L +L      
Sbjct: 813  LPSTISQLSNLTLLGLENCKRLQVLPELPSSIYYICAENCTSLKDVSYQVLKSLLPTGQH 872

Query: 818  -------KLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIP 870
                    + K D+ +     S   +     A     + +  +      L   +PGS IP
Sbjct: 873  QKRKFMVXVVKPDTALAVLEASNXGIRXXXRASYQRIBPVVKLGIAXXALKAFIPGSRIP 932

Query: 871  EWFMYQNEGSSITVTRPSNLYNKKKLVGYAI----CCVFHVLKNSRGNNCFGSYPTHQLN 926
            +W  YQ+ GS +    P N +N    +G+A     C  F  L   + +  F        +
Sbjct: 933  DWIRYQSSGSEVKAELPPNWFN-SNFLGFAFSFVTCGHFSCLFMLKADVLFDWTSRDDSS 991

Query: 927  CHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPW 986
                  +  I F+ +      DH+ L Y          +PL       +  H+ VSF   
Sbjct: 992  SVDIIIVEMISFKRRL---EXDHVCLCY----------VPLPQLRNCSQVTHIKVSFMAV 1038

Query: 987  LGQG-LEVKMCGLHPVYMDEVEELDQTTNQPSRFTVYNLNEFDQHFVGSKMIVATTSKRS 1045
              +G +E+K CG+  VY +E    D   N P      +++           +V       
Sbjct: 1039 SREGEIEIKRCGVGXVYSNE----DGNHNNPPMIRFNSISSPPPPPRSKSTVV------- 1087

Query: 1046 LTEYFGAEASGSGCCDDEEPQPKRFRELE 1074
            L E    E SG+GC + +  +  R R LE
Sbjct: 1088 LEEIHEEEPSGNGCSNVDGSEEVRRRNLE 1116


>gi|51477386|gb|AAU04759.1| MRGH11 [Cucumis melo]
          Length = 1001

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 313/794 (39%), Positives = 446/794 (56%), Gaps = 55/794 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M SR   +   +  G  DVR + I GMGG+GKTTIA+VV+D I  +F+   FL  +    
Sbjct: 203 MTSRLLHMNMHLGLGLDDVRFVAIVGMGGIGKTTIAQVVFDCILSKFDDCCFL-TLPGGD 261

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           SK  LVSLQR++LSQ+    D  IW+   G++M+ +RL  +KVL+V+D   + +QL+ LA
Sbjct: 262 SKQSLVSLQREMLSQIFHKEDFKIWHENHGVEMIKNRLSGRKVLIVLDGAEERRQLEMLA 321

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEV--YKPHGLNYDEALQLFNMKAFKT-YQPLQ 177
           G+ EWFG GSRIIIT+R++ LL     DE+  Y    L++D ALQLF   AF + +Q   
Sbjct: 322 GSTEWFGPGSRIIITTRNKGLLCHPNYDEMKEYNVEELDHDSALQLFLKHAFGSNHQNKD 381

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
             + LS  I+  A  LPLAL V+GS L G+ +  WR TL+RL         DIL+IS+DG
Sbjct: 382 SFMDLSNEIVEKAKRLPLALRVIGSSLYGKEITIWRETLKRLIKVDERNFFDILKISYDG 441

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDL 297
           L    +++FLDI CFF G + D V   LE  G+ P   +++L+++CLI V +  + +HDL
Sbjct: 442 LGVESQQVFLDITCFFNGKNEDRVNEILESFGYSPNSELQLLMQRCLIEVSHKKILVHDL 501

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           + E+G++IV+++S  +  K+SR+W  E++     E      ++GIVL +   E E  +  
Sbjct: 502 ILEMGREIVRKESLTQPEKQSRIWLHEDLYCRFAEKHDLMHIQGIVL-SLEKEMEESIEL 560

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
            A++FS+MT LR+L+I N++L   +EYLS  LR++ W GYP K LP   Q     E+ + 
Sbjct: 561 DAESFSEMTKLRILEINNVELDEDIEYLSPLLRIINWLGYPSKSLPPTFQSRYLFELLLP 620

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
           +S++  +W G +   KLK++ +S+SE+L   PDF+G PNLE+L+L  C RL EIHPS+  
Sbjct: 621 HSQLLRVWDGKRRFPKLKLIDVSNSEHLRVTPDFSGVPNLERLVLCNCVRLCEIHPSINS 680

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
            NKLI+L+++ C  L   P  I  K+L+ L L       +GL+               FP
Sbjct: 681 LNKLILLDLEGCGDLKHFPANIRCKNLQTLKLSG-----TGLEI--------------FP 721

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
           EI  HMEHL+ LHL+G+ I  L  SI  L+GLV L+L  C  L  LP  + NLK L++L 
Sbjct: 722 EI-GHMEHLTHLHLDGSKITHLHPSIGYLTGLVFLDLSTCLGLSSLPFEIGNLKSLKTLL 780

Query: 598 LSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSS-IELLTKLELLNLSDCKNLVR--- 653
           L  C +L K P  + + + L  L +  TSI  VPSS I  L  LE L   DC+ L R   
Sbjct: 781 LKYCKRLDKIPPSLANAESLETLSISETSITHVPSSIIHCLKNLETL---DCEELSRGIW 837

Query: 654 ---LPSSII------ALKSLKTLNLSGCFKL-ENVPETLGQIESLEELDISG---TAVPH 700
              LP   I       L  LK LNL GC  + E++PE L    SLE LD+S    T +P 
Sbjct: 838 KSLLPQLNINQTITTGLGCLKALNLMGCKLMDEDIPEDLHCFSSLETLDLSYNNFTTLPD 897

Query: 701 STSWYSYIPINLMRKSVALK-LPSLSGLCSLRKLNLTDCNLMEGA-------LPSDIGNL 752
           S S    +   ++     LK LP L    SL+ +   DC  M          +PS  G+ 
Sbjct: 898 SLSHLKKLKTLILNYCTELKDLPKLPE--SLQYVGGVDCRSMSEQYYNKILLIPSSSGHQ 955

Query: 753 CSLKELYLSKNSFV 766
             L  +  SK++ V
Sbjct: 956 LYLTFIIPSKDADV 969



 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 103/272 (37%), Positives = 148/272 (54%), Gaps = 34/272 (12%)

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKC--LRSLKLSGCSKLKKFPEIVRSMKDLSE 619
           SI  L+ L+LL+L+ C  L+  P   +N++C  L++LKLSG + L+ FPEI   M+ L+ 
Sbjct: 677 SINSLNKLILLDLEGCGDLKHFP---ANIRCKNLQTLKLSG-TGLEIFPEIGH-MEHLTH 731

Query: 620 LFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVP 679
           L LDG+ I  +  SI  LT L  L+LS C  L  LP  I  LKSLKTL L  C +L+ +P
Sbjct: 732 LHLDGSKITHLHPSIGYLTGLVFLDLSTCLGLSSLPFEIGNLKSLKTLLLKYCKRLDKIP 791

Query: 680 ETLGQIESLEELDISGTAVPHSTS---------------------WYSYIPINLMRKSVA 718
            +L   ESLE L IS T++ H  S                     W S +P   + +++ 
Sbjct: 792 PSLANAESLETLSISETSITHVPSSIIHCLKNLETLDCEELSRGIWKSLLPQLNINQTIT 851

Query: 719 LKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
                 +GL  L+ LNL  C LM+  +P D+    SL+ L LS N+F +LP S++HL KL
Sbjct: 852 ------TGLGCLKALNLMGCKLMDEDIPEDLHCFSSLETLDLSYNNFTTLPDSLSHLKKL 905

Query: 779 LNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
             + L  C  L+ LP+LP +++ V    C S+
Sbjct: 906 KTLILNYCTELKDLPKLPESLQYVGGVDCRSM 937



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 103/221 (46%), Gaps = 37/221 (16%)

Query: 629 EVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
           E+  SI  L KL LL+L  C +L   P++I   K+L+TL LSG   LE  PE +G +E L
Sbjct: 673 EIHPSINSLNKLILLDLEGCGDLKHFPANI-RCKNLQTLKLSGT-GLEIFPE-IGHMEHL 729

Query: 689 EELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSL----------RKLNLTDC 738
             L + G+ + H      +  I  +   V L L +  GL SL          + L L  C
Sbjct: 730 THLHLDGSKITHL-----HPSIGYLTGLVFLDLSTCLGLSSLPFEIGNLKSLKTLLLKYC 784

Query: 739 NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPN 798
             ++  +P  + N  SL+ L +S+ S   +P+SI H  K  N+E  DC+ L         
Sbjct: 785 KRLD-KIPPSLANAESLETLSISETSITHVPSSIIHCLK--NLETLDCEELSR------- 834

Query: 799 IRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNK 839
                        +LL  L + ++ +T + CL +L L+G K
Sbjct: 835 ---------GIWKSLLPQLNINQTITTGLGCLKALNLMGCK 866


>gi|359473396|ref|XP_002268358.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1438

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 365/1178 (30%), Positives = 569/1178 (48%), Gaps = 202/1178 (17%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-I 59
            +DSR E++  L+D  S+ +R++G+ G GG+GK+T+A+ +Y+ +   FE   F+ NV++ +
Sbjct: 193  LDSRVEEVLELLDLKSNSIRVLGLYGPGGVGKSTLAKALYNKLVAHFENRSFISNVKKYL 252

Query: 60   SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            + + GL+SLQ +L+  L  +A + +  V  G+  + S +Q K+VL+++DDV D  QL ++
Sbjct: 253  AQENGLLSLQIKLIGDLSGMASH-VNEVNAGLVAIKSIVQEKRVLIILDDVDDASQLTAI 311

Query: 120  AGN---REWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
            AG    R+WF  GSRIIIT+RD  +L     +E+Y+   LN  E+LQLF+  A    +P 
Sbjct: 312  AGRKKWRKWFYEGSRIIITTRDREVLHELHENELYEVKQLNSPESLQLFSHYALGRVKPT 371

Query: 177  QECVQLSARIIRYAGGLPLALEVLGSFL-SGRSVDEWRSTLERLEIEPPSEILDILQISF 235
             + + LS +I+   GGLPLALEV GS L   R ++EW   L++L+   P ++  +L+IS+
Sbjct: 372  PDYLPLSKQIVSLTGGLPLALEVFGSSLYDKRKIEEWEDALQKLKQIRPMDLQGVLKISY 431

Query: 236  DGLQELEKKIFLDIACFF--KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TL 292
            DGL E EK +FLDIAC F   G  ++   + L+GCGF   IGI+VL++K L+ +  + TL
Sbjct: 432  DGLDEQEKCVFLDIACLFIKMGMKKEDAIDILKGCGFRAEIGIKVLVDKSLLKIAEDYTL 491

Query: 293  WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD------- 345
            WMHD L+++G+QIV  ++ E+LG RSRLW   E+  VL  + G+  ++G+VLD       
Sbjct: 492  WMHDQLRDMGRQIVLHENHEDLGMRSRLWDRSEILRVLQNNLGSRCIQGMVLDFVSDIFM 551

Query: 346  -------------------------------NYHHENEVYLCASAKAFSKMTNLRLLKIC 374
                                            +  E E  L    K+F  M NLRLL+I 
Sbjct: 552  KDSAAAWGRFRGTPNFTTAVTWLKETYKEYFQHAAEKERELILQTKSFESMINLRLLQID 611

Query: 375  NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSN--------LQMDKTIEIYMCYSRIGELWK 426
            N+QL    + +   L+ L WRG PLK LPS+        L + ++  I   +   GE W 
Sbjct: 612  NVQLEGEFKLMPAELKWLQWRGCPLKTLPSDFCPQGLRVLDLSESKNIERLW---GESWV 668

Query: 427  GIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNM 486
            G    + L VM L    NL  +PD +G   LEKLIL+ C  L +IH S+     L+ L++
Sbjct: 669  G----ENLMVMNLHGCCNLTAIPDLSGNQALEKLILQHCHGLVKIHKSIGDIISLLHLDL 724

Query: 487  KDCTSLITLPGKIL-MKSLEKL------NLKSLPTTISGLKCLSTLDVSGDL-------- 531
             +C +L+  P  +  +K+L+ L       LK LP  IS +K L  L + G +        
Sbjct: 725  SECKNLVEFPSDVSGLKNLQTLILSGCSKLKELPENISYMKSLRELLLDGTVIEKLPESV 784

Query: 532  ---------------KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
                             ++ P  +  +E L EL    +A+  +P S   L+ L  L+L  
Sbjct: 785  LRLTRLERLSLNNCQSLKQLPTCIGKLESLRELSFNDSALEEIPDSFGSLTNLERLSLMR 844

Query: 577  CRSLEILPVTVSNLKCLRSLKLSG-----------------------CSKLKKFPEIVRS 613
            C+S+  +P +V NLK L    ++G                       C  L K P  +  
Sbjct: 845  CQSIYAIPDSVRNLKLLTEFLMNGSPVNELPASIGSLSNLKDLSVGHCRFLSKLPASIEG 904

Query: 614  MKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL------ 667
            +  +  L LDGTSI ++P  I  L  L  L +  CK L  LP +I ++ SL TL      
Sbjct: 905  LASMVVLQLDGTSIMDLPDQIGGLKTLRRLEMRFCKRLESLPEAIGSMGSLNTLIIVDAP 964

Query: 668  -----------------NLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSY 707
                             NL+ C +L  +P ++G ++SL  L +  TAV   P S    + 
Sbjct: 965  MTELPESIGKLENLIMLNLNKCKRLRRLPGSIGNLKSLHHLKMEETAVRQLPESFGMLTS 1024

Query: 708  IPINLMRKSVALKLP------------------------SLSGLCSLRKLNLTDCNLMEG 743
            +   LM K   L+LP                        S S L  L +L+     +  G
Sbjct: 1025 LMRLLMAKRPHLELPQALGPTETKVLGAEENSELIVLPTSFSNLSLLYELDARAWKI-SG 1083

Query: 744  ALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR 803
             +P D   L SL+ L L +N+F SLP+S+  LS L  + L  C+ L++LP LP ++ +V 
Sbjct: 1084 KIPDDFDKLSSLEILNLGRNNFSSLPSSLRGLSILRKLLLPHCEELKALPPLPSSLMEVN 1143

Query: 804  VNGCASLVTLLDALKL----------CKS--DSTMIACLDSLK---LLGNKSLAFSMLRE 848
               C +L  + D   L          CK   D   + CL SLK   + G  S + ++ R 
Sbjct: 1144 AANCYALEVISDLSNLESLQELNLTNCKKLVDIPGVECLKSLKGFFMSGCSSCSSTVKRR 1203

Query: 849  YLE-AVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHV 907
              + A+ N R   ++ +PGS IP+WF      +    ++  NL  K  ++G  +    H+
Sbjct: 1204 LSKVALKNLR---TLSIPGSNIPDWF----SRNVAIFSKRKNLVIKAVIIGVVVSLSHHI 1256

Query: 908  LKNSRGNNCFGSYPTHQLNC-HIGHGIYGIGFRDKFG--QAGSDHLWLLYLSRQTCYDIR 964
                R  +   S P  +     +   ++G    D  G  +   DH   LYL R   +   
Sbjct: 1257 QDELR--DQLPSVPGIEAKILRMNRQVFGTML-DLTGVPKTDEDH---LYLCRYREFH-- 1308

Query: 965  LPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVY 1002
             P+ S L+  +   V +   P + +G+E+K  G+H ++
Sbjct: 1309 -PIVSMLKDGDKIQVTMRNPPMV-KGVELKKSGIHLIF 1344


>gi|105922664|gb|ABF81429.1| TIR-NBS-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1107

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 271/596 (45%), Positives = 363/596 (60%), Gaps = 65/596 (10%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVREI-SSKGGLVSLQRQLLSQLLKLADNSIWNVFDG 90
           KTT+ARVVYD I  +FE S FL NVRE+ + K G   LQ QLLS++L +   S+W+   G
Sbjct: 285 KTTVARVVYDRIRWQFEGSCFLANVREVFAEKDGRRRLQEQLLSEIL-MERASVWDSSRG 343

Query: 91  IDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEV 150
           I+M+  RL+ KK+LL++DDV D +QL+ LA    WFG GSRIIITSRD+ ++  +  + +
Sbjct: 344 IEMIKRRLRLKKILLILDDVDDKEQLEFLAEEPGWFGPGSRIIITSRDKKVVTGNNNNRI 403

Query: 151 YKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVD 210
           Y+   LN D+AL LF+ KA K   P ++ V+LS +++ YA GLPLALEV+GSFL  RS+ 
Sbjct: 404 YEAEKLNDDDALMLFSQKASKNDHPAEDFVELSKQVVGYANGLPLALEVIGSFLYDRSIP 463

Query: 211 EWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGF 270
           EW+S + R+   P  +I+D+L+ISFDGL E +KKIFLDIACF  G   D +T  LE  GF
Sbjct: 464 EWKSAINRMNEIPHGKIIDVLRISFDGLHESDKKIFLDIACFLMGFKIDRITRILESRGF 523

Query: 271 HPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVL 330
           H  IGI +LIEK LI+V  + +WMH+LLQ +G++IV+ +SPEE G+RSRLW  E+VC  L
Sbjct: 524 HAGIGIPILIEKSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYEDVCLAL 583

Query: 331 TESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLR 390
            ++T +E                                           G E LSN+LR
Sbjct: 584 MDNTLSE-------------------------------------------GPEDLSNKLR 600

Query: 391 LLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD 450
            L W  YP K LP+ LQ+D+ +E++M  S I +LW G K    LK++ LS+S NLI+ PD
Sbjct: 601 FLEWHSYPSKSLPAGLQVDELVELHMANSSIEQLWYGCKSAVNLKIINLSNSLNLIKTPD 660

Query: 451 FTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK 510
           FTG PNLE LILEGCT L E+HPSL  H KL  +N+  C S+  LP  + M+SL+     
Sbjct: 661 FTGIPNLENLILEGCTSLSEVHPSLARHKKLQHVNLVHCQSIRILPSNLEMESLK----- 715

Query: 511 SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLV 570
                      + TLD  G  K   FP+IV +M  L  L L+GT I  L  SI  L GL 
Sbjct: 716 -----------VFTLD--GCSKLERFPDIVGNMNCLMVLRLDGTGIAELSSSIRHLIGLG 762

Query: 571 LLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS 626
           LL++ NC++LE +P ++  LK L+ L LS CS LK  PE +  ++ L E   DG S
Sbjct: 763 LLSMTNCKNLESIPSSIGCLKSLKKLDLSCCSALKNIPENLGKVESLEE--FDGFS 816



 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/262 (36%), Positives = 146/262 (55%), Gaps = 21/262 (8%)

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNL--KSLPTTISGLKC---LSTLDVSGDL 531
           L NKL  L      S  +LP  + +  L +L++   S+     G K    L  +++S  L
Sbjct: 595 LSNKLRFLEWHSYPSK-SLPAGLQVDELVELHMANSSIEQLWYGCKSAVNLKIINLSNSL 653

Query: 532 KFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
              + P+    + +L  L LEG T++  +  S+     L  +NL +C+S+ ILP  +  +
Sbjct: 654 NLIKTPDFT-GIPNLENLILEGCTSLSEVHPSLARHKKLQHVNLVHCQSIRILPSNLE-M 711

Query: 591 KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKN 650
           + L+   L GCSKL++FP+IV +M  L  L LDGT I E+ SSI  L  L LL++++CKN
Sbjct: 712 ESLKVFTLDGCSKLERFPDIVGNMNCLMVLRLDGTGIAELSSSIRHLIGLGLLSMTNCKN 771

Query: 651 LVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD-------ISGTAVPHST- 702
           L  +PSSI  LKSLK L+LS C  L+N+PE LG++ESLEE D         G AVP +  
Sbjct: 772 LESIPSSIGCLKSLKKLDLSCCSALKNIPENLGKVESLEEFDGFSNPRPGFGIAVPGNEI 831

Query: 703 -SWYSYIPINLMRKSVALKLPS 723
             W+++        S+++++PS
Sbjct: 832 PGWFNH---RSKGSSISVQVPS 850



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 169/396 (42%), Gaps = 83/396 (20%)

Query: 614 MKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCF 673
           + +L EL +  +SI+++    +    L+++NLS+  NL++ P     + +L+ L L GC 
Sbjct: 618 VDELVELHMANSSIEQLWYGCKSAVNLKIINLSNSLNLIKTPD-FTGIPNLENLILEGCT 676

Query: 674 KLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKL 733
            L  V  +L + + L+                    +NL+       LPS   + SL+  
Sbjct: 677 SLSEVHPSLARHKKLQH-------------------VNLVHCQSIRILPSNLEMESLKVF 717

Query: 734 NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
            L  C+ +E   P  +GN+  L  L L       L +SI HL  L  + + +CK L+S+P
Sbjct: 718 TLDGCSKLE-RFPDIVGNMNCLMVLRLDGTGIAELSSSIRHLIGLGLLSMTNCKNLESIP 776

Query: 794 QLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAV 853
                       GC   +  LD           ++C  +LK +         L E+ +  
Sbjct: 777 S---------SIGCLKSLKKLD-----------LSCCSALKNIPENLGKVESLEEF-DGF 815

Query: 854 SNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF-------- 905
           SN R    + VPG+EIP WF ++++GSSI+V  PS        +G+  C  F        
Sbjct: 816 SNPRPGFGIAVPGNEIPGWFNHRSKGSSISVQVPSG------RMGFFACVAFNANDESPS 869

Query: 906 ---HVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYD 962
              H   N R N     YP+             I F    G   SDH+WL YLS     +
Sbjct: 870 LFCHFKANGREN-----YPSPMC----------INFE---GHLFSDHIWLFYLSFDYLKE 911

Query: 963 IRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGL 998
           ++   E   E F  +++ +SF  +  QG++V  CG+
Sbjct: 912 LQ---EWQHESF--SNIELSFHSY-EQGVKVNNCGV 941


>gi|359495272|ref|XP_002276182.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1003

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 275/651 (42%), Positives = 388/651 (59%), Gaps = 63/651 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           + SR +KLR L+   S DVRM+GICGMGG+GKTT+AR +Y  +S++FEA  FL+   +  
Sbjct: 191 IQSRIQKLRMLLCLQSDDVRMVGICGMGGIGKTTLARAIYSQVSNQFEACSFLEIANDFK 250

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            +  L SL  +LLSQLL+  +  I     G   + +RL  +KVL+V+D+V ++  L+ LA
Sbjct: 251 EQD-LTSLAEKLLSQLLQEENLKI----KGSTSIKARLHSRKVLVVLDNVNNLTILEHLA 305

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           GN++WFG GSRII+T+RD+ LL  H VD  Y+    N DEA +     + K Y+ L+  +
Sbjct: 306 GNQDWFGQGSRIIVTTRDQRLLIQHKVD-YYEVAEFNGDEAFEFLKHHSLK-YELLENDL 363

Query: 181 Q-LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           Q LS  II YA GLPLAL VLGS L G + DEWR  L +L+  P  EI ++L++S+D L 
Sbjct: 364 QELSREIIFYAKGLPLALRVLGSLLFGMNKDEWRDYLVKLKSTPNIEIQEVLRLSYDRLD 423

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLL 298
           + EK IFLDIACFFKG D+D+V   L+GCGF    GI+ LI K LIT++  N L MHDL+
Sbjct: 424 DEEKNIFLDIACFFKGEDKDHVVEILKGCGFSAKCGIKTLINKSLITINFANKLEMHDLI 483

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           QE+G+ IV+++ P+E  +RSRLW+ E++  VL  + G+E +EGI L+  H E+   L  +
Sbjct: 484 QEMGKGIVRQECPKEPERRSRLWEHEDIFDVLKRNMGSEKIEGIFLNLSHLEDT--LDFT 541

Query: 359 AKAFSKMTNLRLLKI-------------------CNLQLPNGLEYLSNRLRLLGWRGYPL 399
            +AF+ M  LRLLK+                   C ++  +  ++ SN LR L W GY L
Sbjct: 542 IEAFAGMKKLRLLKVYNSKSISRDFRDTFNNKVNCRVRFAHEFKFCSNDLRYLYWHGYSL 601

Query: 400 KFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEK 459
           K LP +      +E+ M YS I +LWKGIK L++LK + LSHS+ LI+ PDF+G  NLE+
Sbjct: 602 KSLPKDFSPKHLVELSMPYSHIKKLWKGIKVLERLKSIDLSHSKYLIQTPDFSGITNLER 661

Query: 460 LILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGL 519
           L+LEGC  L ++HPSL +  KL  L++K+CT                  L+ LP++   L
Sbjct: 662 LVLEGCINLPKVHPSLGVLKKLNFLSLKNCTM-----------------LRRLPSSTCSL 704

Query: 520 KCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLS------------IELLS 567
           K L T  +SG  KF EFPE   ++E L ELH +G  I  L LS            +  L 
Sbjct: 705 KSLETFILSGCSKFEEFPENFGNLEMLKELHADG--IVNLDLSYCNISDGANVSGLGFLV 762

Query: 568 GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLS 618
            L  LNL    +   LP  +S L  L +L+L  C +L+   ++  S++ L+
Sbjct: 763 SLEWLNLSG-NNFVTLP-NMSGLSHLETLRLGNCKRLEALSQLPSSIRSLN 811



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 186/431 (43%), Gaps = 86/431 (19%)

Query: 590  LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDC 648
            L+ L+S+ LS    L + P+    + +L  L L+G  ++ +V  S+ +L KL  L+L +C
Sbjct: 633  LERLKSIDLSHSKYLIQTPDF-SGITNLERLVLEGCINLPKVHPSLGVLKKLNFLSLKNC 691

Query: 649  KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI 708
              L RLPSS  +LKSL+T  LSGC K E  PE  G +E L+EL   G             
Sbjct: 692  TMLRRLPSSTCSLKSLETFILSGCSKFEEFPENFGNLEMLKELHADGIV----------- 740

Query: 709  PINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSL 768
                                    L+L+ CN+ +GA  S +G L SL+ L LS N+FV+L
Sbjct: 741  -----------------------NLDLSYCNISDGANVSGLGFLVSLEWLNLSGNNFVTL 777

Query: 769  PTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCAS-LVTLLDALKLCKSDSTMI 827
            P +++ LS L  + L +CKRL++L QLP +IR +    C S   T L  L L   DST  
Sbjct: 778  P-NMSGLSHLETLRLGNCKRLEALSQLPSSIRSLNAKNCTSLGTTELLNLLLTTKDST-- 834

Query: 828  ACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRP 887
                                              VV+PGS IP+W  YQ+  + I    P
Sbjct: 835  --------------------------------FGVVIPGSRIPDWIRYQSSRNVIEADLP 862

Query: 888  SNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGF-RDKFGQAG 946
             N       +G+A+  VF        ++ F +               GI F  +    A 
Sbjct: 863  LNW--STNCLGFALALVFGGRFPVAYDDWFWARVFLDFGTCRRSFETGISFPMENSVFAE 920

Query: 947  SDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPW-LGQGLEVKMCGLHPVYMDE 1005
             DH+ L +           P++ +L P +  H+  +F    +    E+K CGL  +Y++E
Sbjct: 921  GDHVVLTF----------APVQPSLSPHQVIHIKATFAIMSVPNYYEIKRCGLGLMYVNE 970

Query: 1006 VEELDQTTNQP 1016
                +   + P
Sbjct: 971  EVNFNSLFSTP 981



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 104/214 (48%), Gaps = 19/214 (8%)

Query: 491 SLITLPGKILMKSLEKLNL-----KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEH 545
           SL +LP     K L +L++     K L   I  L+ L ++D+S      + P+    + +
Sbjct: 600 SLKSLPKDFSPKHLVELSMPYSHIKKLWKGIKVLERLKSIDLSHSKYLIQTPDF-SGITN 658

Query: 546 LSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKL 604
           L  L LEG   +  +  S+ +L  L  L+LKNC  L  LP +  +LK L +  LSGCSK 
Sbjct: 659 LERLVLEGCINLPKVHPSLGVLKKLNFLSLKNCTMLRRLPSSTCSLKSLETFILSGCSKF 718

Query: 605 KKFPEIVRSMKDLSELFLDG----------TSIKEVPSSIELLTKLELLNLSDCKNLVRL 654
           ++FPE   +++ L EL  DG           S     S +  L  LE LNLS   N V L
Sbjct: 719 EEFPENFGNLEMLKELHADGIVNLDLSYCNISDGANVSGLGFLVSLEWLNLSG-NNFVTL 777

Query: 655 PSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
           P ++  L  L+TL L  C +LE + +    I SL
Sbjct: 778 P-NMSGLSHLETLRLGNCKRLEALSQLPSSIRSL 810


>gi|399920230|gb|AFP55577.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1035

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 289/677 (42%), Positives = 408/677 (60%), Gaps = 69/677 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD++ E++  L+D  ++DVR IGI GMGG+GKT +AR+VY+ ISH+F+   FLD+VR+ S
Sbjct: 199 MDTKLEEIDVLLDKEANDVRFIGIWGMGGIGKTILARLVYEKISHQFDVCIFLDDVRKAS 258

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +  GLV LQ+Q+LSQLLK  +  +WNV  GI M+      K VLLV+D+V   +QL++L 
Sbjct: 259 TDHGLVYLQKQILSQLLKEENVPVWNVNGGITMIKRCACNKAVLLVLDNVDQSEQLENLV 318

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G ++WFG  SRIIIT+R++ +L THGV++ Y+  GLN DEAL+LF+ +AFK Y+P ++  
Sbjct: 319 GEKDWFGLRSRIIITTRNQSVLVTHGVEKPYELKGLNKDEALRLFSWEAFKKYEPEEDYA 378

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
             +   + YAGGLPLAL+ LGSFL  RS+  W S L +L+  P   + D+L++S+DGL E
Sbjct: 379 GHTMTFVLYAGGLPLALKTLGSFLYKRSLHSWSSALAKLQNTPDKTVFDLLRVSYDGLDE 438

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV--HNNTLWMHDLL 298
           +EKKIFLDIACF       Y                 VL+EK L+T+   +N + +HDL+
Sbjct: 439 MEKKIFLDIACF----SSQY-----------------VLVEKSLLTISSFDNQIIIHDLI 477

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           +E+G +IV+++S EE G RS LW   ++ HV  ++TGTE+ EGI L  +  E   +   +
Sbjct: 478 REMGCEIVRQESYEEPGGRSLLWLRNDIFHVFAKNTGTEVTEGIFLHLHKLEEADW---N 534

Query: 359 AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
            +AFSKM  L+LL I NL+L  G ++L + LR+L W  YP K LP   Q D    + + +
Sbjct: 535 LQAFSKMCKLKLLYIHNLRLSLGPKFLPDALRILKWSWYPSKSLPPGFQPDDLTILSLVH 594

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           S I  LW GIK+L KLK + LS+S NL R PDFTG PNLEKL+LEGCT L +IHPS+ L 
Sbjct: 595 SNITHLWNGIKYLGKLKSIDLSYSINLTRTPDFTGIPNLEKLVLEGCTSLVKIHPSIALL 654

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
            +L I N ++C S+ +LP ++ M+ LE                  T D+SG  K +  PE
Sbjct: 655 KRLKIWNFRNCKSIKSLPSEVNMEFLE------------------TFDISGCSKLKIIPE 696

Query: 539 IVEHMEHLSELHLEGTAIRGLPLSIELLS-GLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
            V  M+ LS+L+L G A+  LP SIE LS  LV L+L          + +      R LK
Sbjct: 697 FVGQMKRLSKLYLGGPAVEKLPSSIEHLSESLVELDLSG--------IVIREQPYSRFLK 748

Query: 598 LS-GCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV--RL 654
            +   S    FP   +S   L  L           +S++  + L+ L L+DC NL    +
Sbjct: 749 QNLIASSFGLFPR--KSPHPLIPLL----------ASLKHFSSLKELKLNDC-NLCEGEI 795

Query: 655 PSSIIALKSLKTLNLSG 671
           P+ I +L SL+ L L G
Sbjct: 796 PNDIGSLSSLRWLELGG 812



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 160/588 (27%), Positives = 239/588 (40%), Gaps = 163/588 (27%)

Query: 496  PGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-T 554
            P  + + SL   N+  L   I  L  L ++D+S  +     P+    + +L +L LEG T
Sbjct: 584  PDDLTILSLVHSNITHLWNGIKYLGKLKSIDLSYSINLTRTPDFT-GIPNLEKLVLEGCT 642

Query: 555  AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
            ++  +  SI LL  L + N +NC+S++ LP  V N++ L +  +SGCSKLK  PE V  M
Sbjct: 643  SLVKIHPSIALLKRLKIWNFRNCKSIKSLPSEV-NMEFLETFDISGCSKLKIIPEFVGQM 701

Query: 615  KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
            K LS+L+L G +++++PSSIE L+                                    
Sbjct: 702  KRLSKLYLGGPAVEKLPSSIEHLS------------------------------------ 725

Query: 675  LENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK-----------LPS 723
                       ESL ELD+SG  +     +  ++  NL+  S  L            L S
Sbjct: 726  -----------ESLVELDLSGIVI-REQPYSRFLKQNLIASSFGLFPRKSPHPLIPLLAS 773

Query: 724  LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIEL 783
            L    SL++L L DCNL EG +P+DIG+L SL+ L L  N+F     +I   S+      
Sbjct: 774  LKHFSSLKELKLNDCNLCEGEIPNDIGSLSSLRWLELGGNNFA---LTIARTSRSATFVR 830

Query: 784  EDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAF 843
             + + L  L QL   + +  +          + L  C                       
Sbjct: 831  NNNQILAQLRQLLEYVLKRWIE--------FEVLSRC----------------------- 859

Query: 844  SMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICC 903
             M+    E    T Q L  V+PGSEIPEWF  QN  S++    P     +       I C
Sbjct: 860  DMMVRMQETHRRTLQPLEFVIPGSEIPEWFNNQNNPSAVPEEDP-----RLDPDSCEIQC 914

Query: 904  VFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDI 963
            +++                   N  I     GI  +    Q  SDHL LL L        
Sbjct: 915  IWN-------------------NYDIDIDFGGISVK----QIVSDHLCLLVL-------- 943

Query: 964  RLPLESNLEPFES--NHVNVSFEPWLGQG------LEVKMCGLHPVYMDEVEELDQTTNQ 1015
                   L PF+   N++ V+F   + +       ++VK CG+  +Y  + EEL    NQ
Sbjct: 944  -------LSPFQKPENYLEVNFVFTVRRAVGSNISMKVKKCGVRALYEHDTEELISKMNQ 996

Query: 1016 PSRFTVYNLNEFDQHFVGSKMIVATTSKRSLTEYFGAEASGSGCCDDE 1063
             S+ +  +L E +  ++ +K   AT              SGSG  DDE
Sbjct: 997  -SKSSNISLYE-EVPWLKAKQEAAT--------------SGSGGSDDE 1028


>gi|297741023|emb|CBI31335.3| unnamed protein product [Vitis vinifera]
          Length = 983

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 313/789 (39%), Positives = 445/789 (56%), Gaps = 105/789 (13%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD   EKL+ LM+   ++VR++GI G+GG+GKTTIA+ +Y+ IS++F+ S FL+NVRE  
Sbjct: 198 MDFHLEKLKSLMNIELNEVRVVGIYGIGGIGKTTIAKAIYNDISYQFDGSSFLNNVRE-R 256

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           SK   + LQ++LL  +LK     + N+ +GI M+   L  K+VL+V DDV D+ Q+++LA
Sbjct: 257 SKDNALQLQQELLHGILKGKSPKVSNMDEGIQMIKRSLSSKRVLVVFDDVDDLMQIENLA 316

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
               WFG  SRIIIT+R +H L  +GV E Y+   L+  EA++LF+  AFK   P +   
Sbjct: 317 EEHSWFGPRSRIIITTRHKHFLTQYGVKESYEVPILHDAEAIELFSWWAFKQNLPNEIYK 376

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            LS +++ YA GLPLALEVLGSFL  +++ EW S L +L+  P   I ++L+IS+DGL +
Sbjct: 377 NLSYQVVDYAKGLPLALEVLGSFLFKKTISEWESALCKLKTIPHMGIQNVLKISYDGLDD 436

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
           +EK IFLDIACFFKG D+D+V+  L+   F+   GI VL +KCLI++  N L MHDLLQ+
Sbjct: 437 VEKGIFLDIACFFKGKDKDFVSRMLDE-DFYAESGIGVLHDKCLISISGNKLDMHDLLQQ 495

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G +IV+++ P+E G+RSRLW++E++  VL  + G+E +EGI LD  H E+   L  + +
Sbjct: 496 MGWEIVRQECPKEPGRRSRLWEQEDIFDVLKRNMGSEKIEGIFLDLSHLED--ILDFTTE 553

Query: 361 AFSKMTNLRLLKI---------------------CNLQLPNGLEYLSNRLRLLGWRGYPL 399
           AF+ M  LRLLK+                     C ++  +  ++ S+ LR L W GY L
Sbjct: 554 AFAGMKKLRLLKVYNSKSILGDFGDTFTFNNKVNCRVRFAHEFKFCSDDLRYLYWHGYSL 613

Query: 400 KFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEK 459
           K LP +      +++ M YS I +LWKGIK L  LK M LSHS+ LI  PDF+G  NLE+
Sbjct: 614 KSLPKDFSPKHLVDLSMPYSHIKKLWKGIKVLKSLKSMDLSHSKCLIETPDFSGITNLER 673

Query: 460 LILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGL 519
           L+LEGC  L E+HPSL    KL  L++KDC                   L+ LP+ I   
Sbjct: 674 LVLEGCINLPEVHPSLGDLKKLNFLSLKDCKM-----------------LRRLPSRIWNF 716

Query: 520 KCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNC-- 577
           K L TL +SG  KF EFPE   ++E L ELH +GT +R LP S   +  L  L+ + C  
Sbjct: 717 KSLRTLILSGCSKFEEFPENFGNLEMLKELHEDGTVVRALPPSNFSMRNLKKLSFRGCGP 776

Query: 578 ---------RSLEILPVTV---SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT 625
                    RS   +  TV   SNL  L+ L LS C+                    DG 
Sbjct: 777 ASASWLWSKRSSNSICFTVPSSSNLCYLKKLDLSDCN------------------ISDGA 818

Query: 626 SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI 685
           ++     S+  L+ LE LNLS   N V LP ++  L  L  L L  C +L+ +P+    +
Sbjct: 819 NL----GSLGFLSSLEDLNLSG-NNFVTLP-NMSGLSHLVFLGLENCKRLQALPQFPSSL 872

Query: 686 ESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEG-- 743
           E L                       ++R +  + LP++SGL  L+ L L +C  +E   
Sbjct: 873 EDL-----------------------ILRGNNFVTLPNMSGLSHLKTLVLGNCKRLEALP 909

Query: 744 ALPSDIGNL 752
            LPS I +L
Sbjct: 910 QLPSSIRSL 918



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/248 (40%), Positives = 140/248 (56%), Gaps = 31/248 (12%)

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDC 648
           LK L+S+ LS    L + P+    + +L  L L+G  ++ EV  S+  L KL  L+L DC
Sbjct: 645 LKSLKSMDLSHSKCLIETPDF-SGITNLERLVLEGCINLPEVHPSLGDLKKLNFLSLKDC 703

Query: 649 KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---------- 698
           K L RLPS I   KSL+TL LSGC K E  PE  G +E L+EL   GT V          
Sbjct: 704 KMLRRLPSRIWNFKSLRTLILSGCSKFEEFPENFGNLEMLKELHEDGTVVRALPPSNFSM 763

Query: 699 ------------PHSTSW-YSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGAL 745
                       P S SW +S    N    S+   +PS S LC L+KL+L+DCN+ +GA 
Sbjct: 764 RNLKKLSFRGCGPASASWLWSKRSSN----SICFTVPSSSNLCYLKKLDLSDCNISDGAN 819

Query: 746 PSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVN 805
              +G L SL++L LS N+FV+LP +++ LS L+ + LE+CKRLQ+LPQ P ++  + + 
Sbjct: 820 LGSLGFLSSLEDLNLSGNNFVTLP-NMSGLSHLVFLGLENCKRLQALPQFPSSLEDLILR 878

Query: 806 GCASLVTL 813
           G  + VTL
Sbjct: 879 G-NNFVTL 885


>gi|46577339|sp|Q40392.1|TMVRN_NICGU RecName: Full=TMV resistance protein N
 gi|558887|gb|AAA50763.1| N [Nicotiana glutinosa]
          Length = 1144

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 312/928 (33%), Positives = 481/928 (51%), Gaps = 131/928 (14%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLI------SHEFEASGFLD 54
            +D+  EK+  L++ G + VR++GI GMGG+GKTTIAR ++D +      S++F+ + FL 
Sbjct: 191  IDTHLEKIESLLEIGINGVRIMGIWGMGGVGKTTIARAIFDTLLGRMDSSYQFDGACFLK 250

Query: 55   NVREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
            +++E  +K G+ SLQ  LLS+LL+   N   N  DG   + SRL+ KKVL+V+DD+ +  
Sbjct: 251  DIKE--NKRGMHSLQNALLSELLREKANYN-NEEDGKHQMASRLRSKKVLIVLDDIDNKD 307

Query: 115  Q-LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY 173
              L+ LAG+ +WFG+GSRIIIT+RD+HL++ +  D +Y+   L   E++QLF   AF   
Sbjct: 308  HYLEYLAGDLDWFGNGSRIIITTRDKHLIEKN--DIIYEVTALPDHESIQLFKQHAFGKE 365

Query: 174  QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
             P +   +LS  ++ YA GLPLAL+V GS L    + EW+S +E ++    S I+D L+I
Sbjct: 366  VPNENFEKLSLEVVNYAKGLPLALKVWGSLLHNLRLTEWKSAIEHMKNNSYSGIIDKLKI 425

Query: 234  SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTL 292
            S+DGL+  ++++FLDIACF +G ++DY+   LE C      G+R+LI+K L+ +   N +
Sbjct: 426  SYDGLEPKQQEMFLDIACFLRGEEKDYILQILESCHIGAEYGLRILIDKSLVFISEYNQV 485

Query: 293  WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
             MHDL+Q++G+ IV  Q  ++ G+RSRLW  +EV  V++ +TGT  +E I + +Y     
Sbjct: 486  QMHDLIQDMGKYIVNFQ--KDPGERSRLWLAKEVEEVMSNNTGTMAMEAIWVSSY----S 539

Query: 353  VYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
              L  S +A   M  LR+  +        ++YL N LR      YP +  PS  ++   +
Sbjct: 540  STLRFSNQAVKNMKRLRVFNMGRSSTHYAIDYLPNNLRCFVCTNYPWESFPSTFELKMLV 599

Query: 413  EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
             + + ++ +  LW   KHL  L+ + LS S+ L R PDFTG PNLE + L  C+ L E+H
Sbjct: 600  HLQLRHNSLRHLWTETKHLPSLRRIDLSWSKRLTRTPDFTGMPNLEYVNLYQCSNLEEVH 659

Query: 473  PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
             SL   +K+I L + DC SL   P  + ++SLE L L+S  +                  
Sbjct: 660  HSLGCCSKVIGLYLNDCKSLKRFPC-VNVESLEYLGLRSCDS------------------ 700

Query: 533  FREFPEIVEHMEHLSELHLEGTAIRGLPLSI----ELLSGLVLLNLKNCRSLEILPVTVS 588
              + PEI   M+   ++H++G+ IR LP SI      ++ L+L N+KN   L  LP ++ 
Sbjct: 701  LEKLPEIYGRMKPEIQIHMQGSGIRELPSSIFQYKTHVTKLLLWNMKN---LVALPSSIC 757

Query: 589  NLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDC 648
             LK L SL +SGCSKL+  PE +  + +L       T I   PSSI  L KL +L     
Sbjct: 758  RLKSLVSLSVSGCSKLESLPEEIGDLDNLRVFDASDTLILRPPSSIIRLNKLIILMFRGF 817

Query: 649  KNLVR--LPSSIIALKSLKTLNLSGCFKLE-NVPETLGQIESLEELDISGTAVPHSTSWY 705
            K+ V    P     L SL+ LNLS C  ++  +PE +G + SL++LD+S     H     
Sbjct: 818  KDGVHFEFPPVAEGLHSLEYLNLSYCNLIDGGLPEEIGSLSSLKKLDLSRNNFEH----- 872

Query: 706  SYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSF 765
                                                   LPS I  L +L+ L       
Sbjct: 873  ---------------------------------------LPSSIAQLGALQSL------- 886

Query: 766  VSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDST 825
                            +L+DC+RL  LP+LPP + ++ V+ C   +  +  L   +    
Sbjct: 887  ----------------DLKDCQRLTQLPELPPELNELHVD-CHMALKFIHYLVTKRKKLH 929

Query: 826  MIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSV-------VVPGS----EIPEWFM 874
             +   D+         A++M     + +S+ R  +S        V  G     +IP WF 
Sbjct: 930  RVKLDDAHNDTMYNLFAYTM----FQNISSMRHDISASDSLSLTVFTGQPYPEKIPSWFH 985

Query: 875  YQNEGSSITVTRPSNLYNKKKLVGYAIC 902
            +Q   SS++V  P N Y   K +G+A+C
Sbjct: 986  HQGWDSSVSVNLPENWYIPDKFLGFAVC 1013


>gi|255537137|ref|XP_002509635.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223549534|gb|EEF51022.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1034

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 304/812 (37%), Positives = 443/812 (54%), Gaps = 119/812 (14%)

Query: 2   DSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS 61
           + +   +R  + +   DVR++GI GMGG+GKTT+A+ V+  I+ +FE   FL +VR+   
Sbjct: 206 NQKSNSIRASISTKPLDVRVLGIWGMGGIGKTTLAKAVFSDIACQFEGRCFLPSVRKFFE 265

Query: 62  KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGS----RLQRKKVLLVIDDVVDVKQLQ 117
           K     + ++LLSQ+ + +D  I       D+L S    R+  + VL++IDDV   +QL 
Sbjct: 266 KDDGYYIIKELLSQISRESDVKI----SKTDILCSPFVKRMLNRNVLVIIDDVNSPQQLD 321

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
             A NR WFG+GSRII+TSRD  +L     D++Y+   L Y+EA QLF+  AFK   P +
Sbjct: 322 FFAENRNWFGTGSRIIVTSRDRQIL-LGSADDIYEIKKLGYNEAQQLFSQNAFKKTFPPE 380

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
             + LS   I+YA G+PLAL+VLGS L GR+  +W+STLE+L   P  ++L+IL++S+DG
Sbjct: 381 GLIALSHSYIQYANGIPLALKVLGSNLFGRTERKWKSTLEKLRQAPNKDVLNILKVSYDG 440

Query: 238 LQELEKKIFLDIACFFKGNDR-DYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
           L + EK+IFL +  FF    + D VT  L+GCGF   + +  L++K LIT+ +NT+ +HD
Sbjct: 441 LDKEEKEIFLHVVSFFSRKKKIDEVTQILDGCGFSTEVVLCDLVDKSLITISDNTIAIHD 500

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL  +G +IV RQ   E G+ SRLW  E++  VLT + GTE +E I LD    +  + L 
Sbjct: 501 LLHAMGMEIV-RQESTEPGEWSRLWDHEDILRVLTRNAGTEAIEAIFLDMSKIDEIIDL- 558

Query: 357 ASAKAFSKMTNLRLLKICN------------LQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
            +   F++M+NL+LL+  +            ++L  GL+ LS++L+ L W GYP K LP+
Sbjct: 559 -NPNVFARMSNLKLLRFYDPNFDSRELKDIKVRLSRGLDSLSSKLQYLYWNGYPSKTLPA 617

Query: 405 NLQMDKTIEIYMCYSRIGEL-WKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
           N      +E+++  S++  L WK +  L KLK + LS S  L  +P+ + A NL  + L 
Sbjct: 618 NFHPKDLVELHLPSSKLKRLPWKNMD-LKKLKEIDLSWSSRLTTVPELSRATNLTCINLS 676

Query: 464 GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLS 523
              R+                                         +  P+TI GL  L 
Sbjct: 677 DSKRI-----------------------------------------RRFPSTI-GLDSLE 694

Query: 524 TLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEIL 583
           TL++S  +K   FP++   +  L   +L GTAI  +P S+  LS LV LNL +C  L+ L
Sbjct: 695 TLNLSDCVKLERFPDVSRSIRFL---YLYGTAIEEVPSSVGCLSRLVSLNLFDCTKLKSL 751

Query: 584 PVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELL 643
           P ++  +K L  L LSGC+ LK FPEI  +M  L EL+LDGT+I ++P S+E L +L  L
Sbjct: 752 PTSICKIKSLELLCLSGCTNLKHFPEISETMDCLVELYLDGTAIADLPLSVENLKRLSSL 811

Query: 644 NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTS 703
           +LS+C+NLV LP SI  LK L +L+ S C KLE +PE L  I SLE              
Sbjct: 812 SLSNCRNLVCLPESISKLKHLSSLDFSDCPKLEKLPEEL--IVSLE-------------- 855

Query: 704 WYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKN 763
                   L+ +            C L K            L SD+  L  L  L LSK 
Sbjct: 856 --------LIARG-----------CHLSK------------LASDLSGLSCLSFLDLSKT 884

Query: 764 SFVSLPTSITHLSKLLNIELEDCKRLQSLPQL 795
            F +LP SI  LS+L+ +++  C RL+SLP L
Sbjct: 885 KFETLPPSIKQLSQLITLDISFCDRLESLPDL 916


>gi|45544513|dbj|BAD12594.1| N protein [Nicotiana tabacum]
          Length = 1128

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 311/928 (33%), Positives = 481/928 (51%), Gaps = 131/928 (14%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLI------SHEFEASGFLD 54
            +D+  EK+  L++ G + VR++GI GMGG+GKTTIAR ++D +      S++F+ + FL 
Sbjct: 183  IDTHLEKIESLLEIGINGVRIMGIWGMGGVGKTTIARAIFDTLLGRMDSSYQFDGACFLK 242

Query: 55   NVREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
            +++E  +K G+ SLQ  LLS+LL+   N   N  DG   + SRL+ KKVL+V+DD+ +  
Sbjct: 243  DIKE--NKRGMHSLQNALLSELLREKANYN-NEEDGKHQMASRLRSKKVLIVLDDIDNKD 299

Query: 115  Q-LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY 173
              L+ LAG+ +WFG+GSRIIIT+RD+HL++ + +  +Y+   L   E++QLF   AF   
Sbjct: 300  HYLEYLAGDLDWFGNGSRIIITTRDKHLIEKNDI--IYEVTALPDHESIQLFKQHAFGKE 357

Query: 174  QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
             P +   +LS  ++ YA GLPLAL+V GS L    + EW+S +E ++    S I+D L+I
Sbjct: 358  VPNENFEKLSLEVVNYAKGLPLALKVWGSLLHNLRLTEWKSAIEHMKNNSYSGIIDKLKI 417

Query: 234  SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTL 292
            S+DGL+  ++++FLDIACF +G ++DY+   LE C      G+R+LI+K L+ +   N +
Sbjct: 418  SYDGLEPKQQEMFLDIACFLRGEEKDYILQILESCHIGAEYGLRILIDKSLVFISEYNQV 477

Query: 293  WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
             MHDL+Q++G+ IV  Q  ++ G+RSRLW  +EV  V++ +TGT  +E I + +Y     
Sbjct: 478  QMHDLIQDMGKYIVNFQ--KDPGERSRLWLAKEVEEVMSNNTGTMAMEAIWVSSY----S 531

Query: 353  VYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
              L  S +A   M  LR+  +        ++YL N LR      YP +  PS  ++   +
Sbjct: 532  STLRFSNQAVKNMKRLRVFNMGRSSTHYAIDYLPNNLRCFVCTNYPWESFPSTFELKMLV 591

Query: 413  EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
             + + ++ +  LW   KHL  L+ + LS S+ L R PDFTG PNLE + L  C+ L E+H
Sbjct: 592  HLQLRHNSLRHLWTETKHLPSLRRIDLSWSKRLTRTPDFTGMPNLEYVNLYQCSNLEEVH 651

Query: 473  PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
             SL   +K+I L + DC SL   P  + ++SLE L L+S  +                  
Sbjct: 652  HSLGCCSKVIGLYLNDCKSLKRFPC-VNVESLEYLGLRSCDS------------------ 692

Query: 533  FREFPEIVEHMEHLSELHLEGTAIRGLPLSI----ELLSGLVLLNLKNCRSLEILPVTVS 588
              + PEI   M+   ++H++G+ IR LP SI      ++ L+L N+KN   L  LP ++ 
Sbjct: 693  LEKLPEIYGRMKPEIQIHMQGSGIRELPSSIFQYKTHVTKLLLWNMKN---LVALPSSIC 749

Query: 589  NLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDC 648
             LK L SL +SGCSKL+  PE +  + +L       T I   PSSI  L KL +L     
Sbjct: 750  RLKSLVSLSVSGCSKLESLPEEIGDLDNLRVFDASDTLILRPPSSIIRLNKLIILMFRGF 809

Query: 649  KNLVR--LPSSIIALKSLKTLNLSGCFKLE-NVPETLGQIESLEELDISGTAVPHSTSWY 705
            K+ V    P     L SL+ LNLS C  ++  +PE +G + SL++LD+S     H     
Sbjct: 810  KDGVHFEFPPVAEGLHSLEYLNLSYCNLIDGGLPEDIGSLSSLKKLDLSRNNFEH----- 864

Query: 706  SYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSF 765
                                                   LPS I  L +L+ L       
Sbjct: 865  ---------------------------------------LPSSIAQLGALQSL------- 878

Query: 766  VSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDST 825
                            +L+DC+RL  LP+LPP + ++ V+ C   +  +  L   +    
Sbjct: 879  ----------------DLKDCQRLTQLPELPPELNELHVD-CHMALKFIHDLVTKRKKLH 921

Query: 826  MIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSV-------VVPGS----EIPEWFM 874
             +   D+         A++M     + +S+ R  +S        V  G     +IP WF 
Sbjct: 922  RVKLDDAHNDTMYNLFAYTM----FQNISSMRHDISASDSLSLTVFTGQPYPEKIPSWFH 977

Query: 875  YQNEGSSITVTRPSNLYNKKKLVGYAIC 902
            +Q   SS++V  P N Y   K +G+A+C
Sbjct: 978  HQGWDSSVSVNLPENWYIPDKFLGFAVC 1005


>gi|356506581|ref|XP_003522058.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1166

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 246/561 (43%), Positives = 353/561 (62%), Gaps = 23/561 (4%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI-SSKGG 64
           E +  L    S+DV ++G+ GMGG+GKTTIA+ +Y+ I   FE   FL ++RE+     G
Sbjct: 241 EMIELLDQKQSNDVLILGMWGMGGIGKTTIAKAIYNKIGRNFEGKSFLAHIREVWEQDAG 300

Query: 65  LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNRE 124
            V LQ QLL  + K  +  I NV  G  ML  RL+ K+VLL++DDV  + QL  L G+RE
Sbjct: 301 QVYLQEQLLFDIKKETNTKIRNVESGKVMLKERLRHKRVLLILDDVNKLHQLNVLCGSRE 360

Query: 125 WFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSA 184
           WFGSGSRIIIT+RD H+L+   VD+V++  G++ DE+++LF+  AFK   P ++ ++LS 
Sbjct: 361 WFGSGSRIIITTRDMHILRGRRVDKVFRMKGMDEDESIELFSWHAFKQASPREDFIELSR 420

Query: 185 RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL-QELEK 243
            ++ Y+ GLPLALEVLGS+L    V EW++ LE+L+  P  E+ + L+IS+DGL  + EK
Sbjct: 421 NLVAYSAGLPLALEVLGSYLFDMEVIEWKNVLEKLKKIPNDEVQEKLKISYDGLTDDTEK 480

Query: 244 KIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELG 302
            IFLDIACFF G DR+ V + L GCG     GIRVL+E+ L+TV + N L MHDLL+++G
Sbjct: 481 GIFLDIACFFIGMDRNDVIHILNGCGLCAENGIRVLVERSLVTVDYKNKLGMHDLLRDMG 540

Query: 303 QQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAF 362
           ++I++ ++P EL +RSRLW  E+   VL++ TGT+ +EG+ L    +  +   C S KAF
Sbjct: 541 REIIRSKTPMELEERSRLWFHEDALDVLSKETGTKAIEGLALKLPRNNTK---CLSTKAF 597

Query: 363 SKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIG 422
            +M  LRLL++  +QL    +YLS  LR L W G+PL  +P+NL     + I +  S + 
Sbjct: 598 KEMKKLRLLQLAGVQLVGDFKYLSKDLRWLCWHGFPLACIPTNLYQGSLVSIELENSNVN 657

Query: 423 ELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLI 482
            LWK  + ++KLK++ LSHS  L + PDF+  PNLEKL+L  C RL EI  ++   NK++
Sbjct: 658 LLWKEAQVMEKLKILNLSHSHYLTQTPDFSNLPNLEKLLLIDCPRLSEISYTIGHLNKVL 717

Query: 483 ILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEH 542
           ++N +DC S                 L+ LP +I  LK L  L +SG LK  +  E +E 
Sbjct: 718 LINFQDCIS-----------------LRKLPRSIYKLKSLKALILSGCLKIDKLEEDLEQ 760

Query: 543 MEHLSELHLEGTAIRGLPLSI 563
           ME L+ L  + TAI  +P SI
Sbjct: 761 MESLTTLIADKTAITRVPFSI 781



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 197/435 (45%), Gaps = 60/435 (13%)

Query: 502 KSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP----EIVEHMEHLSELHLEGTAIR 557
           K++E L LK LP   +  KCLST       K R       ++V   ++LS+  L      
Sbjct: 575 KAIEGLALK-LPR--NNTKCLSTKAFKEMKKLRLLQLAGVQLVGDFKYLSK-DLRWLCWH 630

Query: 558 GLPLS---IELLSG-LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRS 613
           G PL+     L  G LV + L+N  ++ +L      ++ L+ L LS    L + P+   +
Sbjct: 631 GFPLACIPTNLYQGSLVSIELENS-NVNLLWKEAQVMEKLKILNLSHSHYLTQTPDF-SN 688

Query: 614 MKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC 672
           + +L +L L D   + E+  +I  L K+ L+N  DC +L +LP SI  LKSLK L LSGC
Sbjct: 689 LPNLEKLLLIDCPRLSEISYTIGHLNKVLLINFQDCISLRKLPRSIYKLKSLKALILSGC 748

Query: 673 FKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRK 732
            K++ + E L Q+ESL  L    TA+       + +P +++R     K      LC    
Sbjct: 749 LKIDKLEEDLEQMESLTTLIADKTAI-------TRVPFSIVRS----KRIGYISLCGYEG 797

Query: 733 LNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLP---TSITHLSKLLNIELEDCKRL 789
            +      +  +  S   +L S  + +L  +S VSL    +S  HLS +     +D   L
Sbjct: 798 FSRDVFPSIIWSWMSPTNSLSSRVQTFLDVSSLVSLDVPNSSSNHLSYI----SKDLPLL 853

Query: 790 QSLPQLPPNIRQVRVNGC----ASLVTLLDALKLCKSDS--------TMIACLDSLKLLG 837
           QSL     +  Q+ ++      A   T  + L+   + S        T+I C + +  LG
Sbjct: 854 QSLCIECGSELQLSIDAANILDALYATNFEELESTAATSQMHNMNVLTLIECNNQVHNLG 913

Query: 838 NKSLAFSML--------------REYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSIT 883
           +K+   S+L              +  L+ ++ +      ++PG   P+W  + +EGSS+T
Sbjct: 914 SKNFRRSLLIQMGTSCQVTNILKQRILQNMTTSDGGGGCLLPGDSYPDWLTFNSEGSSLT 973

Query: 884 VTRPS-NLYNKKKLV 897
              P  N  N KK++
Sbjct: 974 FEIPQVNGRNLKKMM 988


>gi|163914239|dbj|BAF95889.1| N-like protein [Nicotiana tabacum]
          Length = 1169

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 311/929 (33%), Positives = 473/929 (50%), Gaps = 127/929 (13%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMI-GICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            +D+  +KL+ L+  G +DVR+I GI GMGGLGKTTIARV++D++SH+FEA+ FL +++E 
Sbjct: 199  IDTHLDKLKSLLKVGINDVRIILGIWGMGGLGKTTIARVIFDILSHQFEAACFLADIKEN 258

Query: 60   SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
              +  L SLQ  LLS+L +  D+ + N  DG  M+  RL  KKVL+V+DD+     L+ L
Sbjct: 259  EKRHQLHSLQNTLLSELSRRKDDYVNNKHDGKRMIPDRLFSKKVLIVLDDIDHKDHLEYL 318

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            AG+  WFG+GSR+++T+R++HL++ + V  +Y+   L+  E++QLF   AF+   P +  
Sbjct: 319  AGDIGWFGNGSRVVVTTRNKHLIEKNDV--IYEMTALSDHESIQLFCQHAFRKEDPDEHF 376

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +LS  +++YA GLPLAL+V GS L    + EW+S +E+++I   SEI+D L+IS+DGL+
Sbjct: 377  KKLSLEVVKYANGLPLALKVWGSLLHNLGLTEWKSAIEQMKINSNSEIVDKLKISYDGLE 436

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCL--ITVHNNTLWMHDL 297
             +++++FLDIACF +G  + Y+   LE C      G+R+LI+K L  IT     + MHDL
Sbjct: 437  PIQQEMFLDIACFLRGEQKAYILQILESCHIGAEYGLRILIDKSLVFITEDYQIIQMHDL 496

Query: 298  LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIV---LDNYHHENEVY 354
            +Q++G+ IV  Q  +  G+RSRLW  E+   V+T + GT  VE I    LD     NE  
Sbjct: 497  IQDMGKYIVNLQ--KNPGERSRLWLNEDFEEVMTNNAGTVAVEAIWVHDLDTLRFNNE-- 552

Query: 355  LCASAKAFSKMTNLRLL----KICNLQLPN-GLEYLSNRLRLLGWRGYPLKFLPSNLQMD 409
                  A   M  LR+L    ++ +  + +  +EYLSN LR     GYP + LPS  +  
Sbjct: 553  ------AMKNMKKLRILYIDREVYDFNISDEPIEYLSNNLRWFNVDGYPCESLPSTFEPK 606

Query: 410  KTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLY 469
              + + + +S +  LW   KHL  L+ + L+ SE+L+R PDFTG PNLE L +  C  L 
Sbjct: 607  MLVHLELSFSSLRYLWMETKHLPSLRTINLTGSESLMRTPDFTGMPNLEYLDMSFCFNLE 666

Query: 470  EIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG 529
            E+H SL   +KLI L++ DC SL   P          +N++S          L  LD+ G
Sbjct: 667  EVHHSLGCCSKLIGLDLTDCKSLKRFPC---------VNVES----------LEYLDLPG 707

Query: 530  DLKFREFPEIVEHMEHLSELHLEGTAIRGLP-LSIELLSGLVLLNLKNCRSLEILPVTVS 588
                 +FPEI   M+   ++H+  + IR LP  S    + +  L+L +  +L + P ++ 
Sbjct: 708  CSSLEKFPEIRGRMKLEIQIHMR-SGIRELPSSSFHYQTRITWLDLSDMENLVVFPSSIC 766

Query: 589  NLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNL--- 645
             L  L  L +SGCSKL+  PE +  + +L  L+   T I   PSSI  L KL  L+    
Sbjct: 767  RLISLVQLFVSGCSKLESLPEEIGDLDNLEVLYASDTLISRPPSSIVRLNKLNSLSFRCS 826

Query: 646  SDCKNLVRLPSSIIALKSLKTLNLSGCFKLE-NVPETLGQIESLEELDISGTAVPHSTSW 704
             D       P     L SLK L+LS C  ++  +PE +G + SL+ELD+ G    H    
Sbjct: 827  GDNGVHFEFPPVAEGLLSLKNLDLSYCNLIDGGLPEDIGSLSSLKELDLRGNNFEH---- 882

Query: 705  YSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNS 764
                                                    LP  I  L +L+ L LS   
Sbjct: 883  ----------------------------------------LPRSIAQLGALRSLGLSF-- 900

Query: 765  FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDS 824
                                 C+ L  LP+L   + ++ V+ C   +  ++ L   +   
Sbjct: 901  ---------------------CQTLIQLPELSHELNELHVD-CHMALKFINDLVTKRKKL 938

Query: 825  TMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSE-----------IPEWF 873
              +          N S+         + +S+ R  +SV     E           IP WF
Sbjct: 939  QRVVFPPLYDDAHNDSIYNLFAHALFQNISSLRHDISVSDSLFENVFTIWHYWKKIPSWF 998

Query: 874  MYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
             ++   SS++V  P N Y   K +G+A+C
Sbjct: 999  HHKGTDSSVSVDLPENWYIPDKFLGFAVC 1027


>gi|451798984|gb|AGF69190.1| TMV resistance protein N-like protein 4 [Vitis labrusca]
          Length = 1049

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 273/681 (40%), Positives = 392/681 (57%), Gaps = 84/681 (12%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EKL+ LM++  ++VR+IGICG GG+GKTTIA+ +Y+ IS +++ S FL N+RE  SKG +
Sbjct: 204 EKLKSLMNTELNEVRVIGICGTGGVGKTTIAKAIYNEISCQYDGSSFLRNMRE-RSKGDI 262

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
           + LQ++LL  +L+     I  V +GI M+   L   +VL++ DDV ++KQL+ LA  ++W
Sbjct: 263 LQLQQELLHGILRGKFFKINTVDEGISMIKRCLSSNRVLIIFDDVDELKQLEYLAEEKDW 322

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSAR 185
           F + S IIITSRD+H+L  +GVD  Y+   LN +EA++LF++ AFK   P +    LS  
Sbjct: 323 FQAKSTIIITSRDKHVLARYGVDIPYEVSKLNKEEAIELFSLWAFKQNHPKEVYKNLSYN 382

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           II YA GLPLAL+VLG+ L G+ + EW S + +L+I P  EI ++L+ISFDGL +++K I
Sbjct: 383 IIDYANGLPLALKVLGASLFGKKISEWESAMCKLKIIPHMEIHNVLRISFDGLDDVDKGI 442

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQI 305
           FLD+ACFFKG+D+ +V+  L   G H   GI  L ++CLITV  N L MHDL+Q++G +I
Sbjct: 443 FLDVACFFKGDDKYFVSRIL---GPHAKHGITTLADRCLITVSKNRLDMHDLIQQMGWEI 499

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKM 365
           ++++ P++ G+RSRLW +    HVL  + GT+ +EG+ LD     N   L  + ++F +M
Sbjct: 500 IRQECPKDPGRRSRLW-DSNAYHVLIRNMGTQAIEGLFLDRCKF-NPSQL--TMESFKEM 555

Query: 366 TNLRLLKICNLQ--------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
             LRLLKI N +        LP   E+ +  LR L W GYPL+ LP N      +E+ + 
Sbjct: 556 NKLRLLKIHNPRRKLFLENHLPRDFEFSAYELRYLHWDGYPLESLPMNFHAKNLVELSLR 615

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
            S I ++W+G K  DKL+V+ LSHS +LIR+PD +  PNLE L LEGC            
Sbjct: 616 DSNIKQVWRGNKLHDKLRVIDLSHSVHLIRIPDLSSVPNLEILTLEGC------------ 663

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
                                        +NL+ LP  I  LK L TL  +G  K   FP
Sbjct: 664 -----------------------------VNLELLPRGIYKLKHLQTLSCNGCSKLERFP 694

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
           EI+ +M  L  L L GTAI  LP SI  L+GL                        ++L 
Sbjct: 695 EIMANMRKLRVLDLSGTAIMDLPSSITHLNGL------------------------QTLL 730

Query: 598 LSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSS 657
           L  CSKL + P  +  +  L +L L+G     +P +I  L++L+ LNLS C NL ++P  
Sbjct: 731 LQECSKLHQIPSHICYLSSLKKLNLEGGHFSSIPPTINQLSRLKALNLSHCNNLEQIPE- 789

Query: 658 IIALKSLKTLNLSGCFKLENV 678
                 L  L++  C  LEN+
Sbjct: 790 --LPSGLINLDVHHCTSLENL 808



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 140/529 (26%), Positives = 222/529 (41%), Gaps = 94/529 (17%)

Query: 496  PGKILMKSLEKLN-LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT 554
            P ++ M+S +++N L+ L       K      +  D +F  +         L  LH +G 
Sbjct: 544  PSQLTMESFKEMNKLRLLKIHNPRRKLFLENHLPRDFEFSAY--------ELRYLHWDGY 595

Query: 555  AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
             +  LP++      LV L+L++    ++      + K LR + LS    L + P      
Sbjct: 596  PLESLPMNFHA-KNLVELSLRDSNIKQVWRGNKLHDK-LRVIDLSHSVHLIRIP------ 647

Query: 615  KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
             DLS           VP+       LE+L L  C NL  LP  I  LK L+TL+ +GC K
Sbjct: 648  -DLSS----------VPN-------LEILTLEGCVNLELLPRGIYKLKHLQTLSCNGCSK 689

Query: 675  LENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP-SLSGLCSLRKL 733
            LE  PE +  +  L  LD+SGTA+                    + LP S++ L  L+ L
Sbjct: 690  LERFPEIMANMRKLRVLDLSGTAI--------------------MDLPSSITHLNGLQTL 729

Query: 734  NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
             L +C+ +   +PS I  L SLK+L L    F S+P +I  LS+L  + L  C  L+ +P
Sbjct: 730  LLQECSKLH-QIPSHICYLSSLKKLNLEGGHFSSIPPTINQLSRLKALNLSHCNNLEQIP 788

Query: 794  QLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAV 853
            +LP  +  + V+ C SL  L        S S ++            S  F   +  ++A 
Sbjct: 789  ELPSGLINLDVHHCTSLENL-------SSPSNLLW-----------SSLFKCFKSKIQAR 830

Query: 854  SNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRG 913
               R   + +   + IPEW  +Q  G  IT+  P + Y     +G+ +C ++  L+    
Sbjct: 831  DFRRPVRTFIAERNGIPEWICHQKSGFKITMKLPWSWYENDDFLGFVLCSLYVPLE---- 886

Query: 914  NNCFGSYPTHQLNCHIG---HGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESN 970
                 + P    NC +       Y      +F +   D       S Q C  I  P  + 
Sbjct: 887  ---IETTPHRDFNCKLNFDDDSAYFSCHSHQFCEFCYDE----DASSQGCL-IYYPKSNI 938

Query: 971  LEPFESNH---VNVSFEPWLG-QGLEVKMCGLHPVYMDEVEELDQTTNQ 1015
             E + SN    +N SF  + G + ++V  CG H +Y  + E+ + T  Q
Sbjct: 939  PEGYHSNEWRTLNASFNVYFGVKPVKVARCGFHFLYAHDYEQNNLTIVQ 987


>gi|359495274|ref|XP_002276409.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1135

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 255/596 (42%), Positives = 360/596 (60%), Gaps = 43/596 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D+R ++++ L+   S DVRM+GI GMGG+GKTT+ R VY  IS++FE   FL+NV E  
Sbjct: 193 IDARIQEMKTLLCLASDDVRMVGIWGMGGIGKTTLVRAVYSRISYQFEGCSFLENVAEDL 252

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            K GL+ LQ +LLS LL+  + ++      +  + +RL  KKVL+V+D+V D   L+ L 
Sbjct: 253 KKKGLIGLQEKLLSHLLEEENLNM----KELTSIKARLHSKKVLIVLDNVNDPTILECLI 308

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           GN++WFG GS IIIT+RD+ LL +H ++ +YK H  N DEAL+     + K     ++ +
Sbjct: 309 GNQDWFGRGSTIIITTRDKRLLLSHKIN-LYKVHKFNDDEALEFLARYSLKHELLREDFL 367

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS  +I YA GLPLAL VLGSFL   S +EWR  L++L+  P  +I ++L+IS+DGL  
Sbjct: 368 ELSRVVICYAQGLPLALTVLGSFLFSMSKEEWRDQLDKLKSIPNMKIHEVLKISYDGLDF 427

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            EK IFLDIACF KG D++YV   L+ CGF  V GIR L +K LI+  +N + MHDL+QE
Sbjct: 428 EEKNIFLDIACFLKGEDKNYVKEILDYCGFFSVSGIRALADKSLISFFHNRIMMHDLIQE 487

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G +IV RQ     G+RSRLW  +++   L ++T    +EGI LD  H +  +    S +
Sbjct: 488 MGMEIV-RQESHNPGQRSRLWLHKDINDALKKNTENGKIEGIFLDLSHSQEIIDF--STQ 544

Query: 361 AFSKMTNLRLLKI------------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFL 402
           AF +M  LRLLK+                  C +     L +  + LR L   GY LK L
Sbjct: 545 AFPRMYKLRLLKVYESNKISRNFGDTLNKENCKVHFSPKLRFCYDELRYLYLYGYSLKSL 604

Query: 403 PSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
            ++      + + M YS I  LWKGIK L+KLKV+ LSHS++LI  PDF+  PNLE+L+L
Sbjct: 605 DNDFNAKNLVHLSMHYSHINRLWKGIKVLEKLKVVDLSHSKSLIETPDFSRVPNLERLVL 664

Query: 463 EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCL 522
           EGC  L+++HPSL + NKL  L++K+C                   LKSLP+++  LK L
Sbjct: 665 EGCISLHKVHPSLGVLNKLNFLSLKNCEK-----------------LKSLPSSMCDLKSL 707

Query: 523 STLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCR 578
            T  +SG  +  +FPE   ++E L ELH +G  +R LP S  LL  L +L+ K CR
Sbjct: 708 ETFILSGCSRLEDFPENFGNLEMLKELHADGIPVRVLPSSFSLLRNLEILSFKGCR 763



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 160/471 (33%), Positives = 215/471 (45%), Gaps = 99/471 (21%)

Query: 590  LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDC 648
            L+ L+ + LS    L + P+  R + +L  L L+G  S+ +V  S+ +L KL  L+L +C
Sbjct: 633  LEKLKVVDLSHSKSLIETPDFSR-VPNLERLVLEGCISLHKVHPSLGVLNKLNFLSLKNC 691

Query: 649  KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---------- 698
            + L  LPSS+  LKSL+T  LSGC +LE+ PE  G +E L+EL   G  V          
Sbjct: 692  EKLKSLPSSMCDLKSLETFILSGCSRLEDFPENFGNLEMLKELHADGIPVRVLPSSFSLL 751

Query: 699  -------------PHSTSWYSYIPINLMRKSVALK---LPSLSGLCSLRKLNLTDCNLME 742
                         P STSW       L R+S +     L  LSGL SL +LNL  CNL +
Sbjct: 752  RNLEILSFKGCRGPPSTSWL------LPRRSSSSTGSILHHLSGLYSLTRLNLGYCNLSD 805

Query: 743  GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
                S +  L SL+ L LS N+FV+LP +I  LS L  + LE CKRLQ LP+LP +I  +
Sbjct: 806  ETNLSSLCLLSSLEVLGLSGNNFVTLP-NIRGLSSLEGLLLEKCKRLQILPELPSSIYSL 864

Query: 803  RVNGCASL-----VTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTR 857
                C SL       L       KS      C                         N+ 
Sbjct: 865  IAQDCISLENASNQVLKSLFPTAKSPKKTFKC-------------------------NSG 899

Query: 858  QHL-SVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNC 916
             HL  V+V GS IP+W  YQ+ G  +    P N YN   L+G A+  V +V      +N 
Sbjct: 900  AHLIYVMVYGSRIPDWIRYQSSGCEVEADLPPNWYN-SNLLGLALSFVTYVF----ASNV 954

Query: 917  F--GSYP-THQLNCHIGHGIYGIGFR-DKFGQAGSDHLWLLYLSRQTCYDIRLPLESN-- 970
                SY   +  + +I +    I  R DK G  G DH+WLLY        I+LPL SN  
Sbjct: 955  IIPVSYTLRYSTSSYIAN---RISIRCDKEG-VGLDHVWLLY--------IKLPLFSNWH 1002

Query: 971  ----LEPFESNHVNVSF-EPWLGQGLEVKMCGLHPVYMDEVEELDQTTNQP 1016
                +   E  H++VSF    +G    +K CG   VY +     DQ  N P
Sbjct: 1003 NGTPINWHEVTHISVSFGTQVMGWYPPIKRCGFDLVYSN-----DQDVNPP 1048


>gi|37654137|emb|CAD56833.1| putative resistance gene analogue protein [Lens culinaris]
          Length = 810

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 259/562 (46%), Positives = 351/562 (62%), Gaps = 57/562 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-I 59
           +DSR E++  L+    SDVR IGI GMGG+GKTTIAR VYD I  EF+ S FL ++RE I
Sbjct: 249 IDSRIEEIYSLLGMRLSDVRFIGIWGMGGIGKTTIARSVYDAIKDEFQVSCFLADIRETI 308

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S   GLV +Q +LLS L  +  N  +N+ DG  +L +  + KKVLLV+DDV ++ QL+SL
Sbjct: 309 SRTNGLVRIQTELLSHL-TIRSNDFYNIHDGKKILANSFRNKKVLLVLDDVSELSQLESL 367

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG +EWFGSG R+IITSRD+HLL THGV+E YK  GL  +EAL+LF +KAFK  QP +E 
Sbjct: 368 AGKQEWFGSGIRVIITSRDKHLLMTHGVNETYKAKGLVKNEALKLFCLKAFKQNQPKEEY 427

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           + L   ++ YA GLPLALEVLGS   GR+V+ W S LE++   P S+I D L+IS+D LQ
Sbjct: 428 LSLCKEVVEYARGLPLALEVLGSHFHGRTVEVWHSALEQMRNVPHSKIHDTLKISYDSLQ 487

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH--NNTLWMHDL 297
            +E+ +FLDIACFFKG D D V   LE CG++P IGI +LIE+ L++    +  LWMHDL
Sbjct: 488 PMERNMFLDIACFFKGMDIDGVMEILEDCGYYPKIGIDILIERSLVSFDRGDRKLWMHDL 547

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           L+E+G+ IV ++SP + GKRSRLW ++++  VLT++ GT+ ++GI L+        +   
Sbjct: 548 LEEMGRNIVCQESPNDPGKRSRLWSQKDIDQVLTKNKGTDKIQGIALNLVQPYEAGW--- 604

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEY---------------------LSNRLRLLGWRG 396
           + +AFS+++ LRLLK+C ++LP G  +                       + L++L WRG
Sbjct: 605 NIEAFSRLSQLRLLKLCEIKLPRGSRHELSASPLGTQYVNKTSRGLGCFPSSLKVLDWRG 664

Query: 397 YPLKFLPSNLQMDKTIEIYMCYSRIGE--LWKG--------------------------- 427
            PLK  P     D+ + + + +S+I +   W                             
Sbjct: 665 CPLKTPPQTNHFDEIVNLKLFHSKIEKTLAWNTGKDSINSLFQFMLLKLFKYHPNNSSIL 724

Query: 428 IKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMK 487
           I  L+ LK + LS S+ L R PDF G PNLE L+LEGCT L EIHPSLL H  LI+LN+K
Sbjct: 725 IMFLENLKSINLSFSKCLTRSPDFVGVPNLESLVLEGCTSLTEIHPSLLSHKTLILLNLK 784

Query: 488 DCTSLITLPGKILMKSLEKLNL 509
           DC  L  LP KI   SL+ L+L
Sbjct: 785 DCKRLKALPCKIETSSLKCLSL 806



 Score = 44.3 bits (103), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 3/84 (3%)

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDC 648
           L+ L+S+ LS    L + P+ V  + +L  L L+G TS+ E+  S+     L LLNL DC
Sbjct: 728 LENLKSINLSFSKCLTRSPDFV-GVPNLESLVLEGCTSLTEIHPSLLSHKTLILLNLKDC 786

Query: 649 KNLVRLPSSIIALKSLKTLNLSGC 672
           K L  LP   I   SLK L+LSGC
Sbjct: 787 KRLKALPCK-IETSSLKCLSLSGC 809


>gi|359477831|ref|XP_002282906.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 879

 Score =  441 bits (1134), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 267/658 (40%), Positives = 383/658 (58%), Gaps = 81/658 (12%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EKL+ LM++  ++VR+IGICG GG+GKTTIA+ +Y+ IS +++ S FL N+RE  SKG +
Sbjct: 204 EKLKSLMNTELNEVRVIGICGTGGVGKTTIAKAIYNEISCQYDGSSFLRNMRE-RSKGDI 262

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
           + LQ++LL  +L+     I  V +GI M+   L   +VL++ DDV ++KQL+ LA  ++W
Sbjct: 263 LQLQQELLHGILRGKFFKINTVDEGISMIKRCLSSNRVLIIFDDVDELKQLEYLAEEKDW 322

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSAR 185
           F + S IIITSRD+H+L  +GVD  Y+   LN +EA++LF++ AFK   P +    LS  
Sbjct: 323 FQAKSTIIITSRDKHVLARYGVDIPYEVSKLNKEEAIELFSLWAFKQNHPKEVYKNLSYN 382

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           II YA GLPLAL+VLG+ L G+ + EW S + +L+I P  EI ++L+ISFDGL +++K I
Sbjct: 383 IIDYANGLPLALKVLGASLFGKKISEWESAMCKLKIIPHMEIHNVLRISFDGLDDVDKGI 442

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQI 305
           FLD+ACFFKG+D+ +V+  L   G H   GI  L ++CLITV  N L MHDL+Q++G +I
Sbjct: 443 FLDVACFFKGDDKYFVSRIL---GPHAKHGITTLADRCLITVSKNRLDMHDLIQQMGWEI 499

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKM 365
           ++++ P++ G+RSRLW +    HVL  + GT+ +EG+ LD     N   L  + ++F +M
Sbjct: 500 IRQECPKDPGRRSRLW-DSNAYHVLIRNMGTQAIEGLFLDRCKF-NPSQL--TMESFKEM 555

Query: 366 TNLRLLKICNLQ--------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
             LRLLKI N +        LP   E+ +  LR L W GYPL+ LP N      +E+ + 
Sbjct: 556 NKLRLLKIHNPRRKLFLENHLPRDFEFSAYELRYLHWDGYPLESLPMNFHAKNLVELSLR 615

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
            S I ++W+G K  DKL+V+ LSHS +LIR+PD +  PNLE L LEGC            
Sbjct: 616 DSNIKQVWRGNKLHDKLRVIDLSHSVHLIRIPDLSSVPNLEILTLEGC------------ 663

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
                                        +NL+ LP  I  LK L TL  +G  K   FP
Sbjct: 664 -----------------------------VNLELLPRGIYKLKHLQTLSCNGCSKLERFP 694

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
           EI+ +M  L  L L GTAI  LP SI  L+G                        L++L 
Sbjct: 695 EIMANMRKLRVLDLSGTAIMDLPSSITHLNG------------------------LQTLL 730

Query: 598 LSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           L  CSKL + P  +  +  L +L L+G     +P +I  L++L+ LNLS C NL ++P
Sbjct: 731 LQECSKLHQIPSHICYLSSLKKLNLEGGHFSSIPPTINQLSRLKALNLSHCNNLEQIP 788



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/127 (43%), Positives = 82/127 (64%), Gaps = 1/127 (0%)

Query: 568 GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSI 627
            L +L L+ C +LE+LP  +  LK L++L  +GCSKL++FPEI+ +M+ L  L L GT+I
Sbjct: 654 NLEILTLEGCVNLELLPRGIYKLKHLQTLSCNGCSKLERFPEIMANMRKLRVLDLSGTAI 713

Query: 628 KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
            ++PSSI  L  L+ L L +C  L ++PS I  L SLK LNL G     ++P T+ Q+  
Sbjct: 714 MDLPSSITHLNGLQTLLLQECSKLHQIPSHICYLSSLKKLNLEGG-HFSSIPPTINQLSR 772

Query: 688 LEELDIS 694
           L+ L++S
Sbjct: 773 LKALNLS 779



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 141/315 (44%), Gaps = 61/315 (19%)

Query: 496 PGKILMKSLEKLN-LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT 554
           P ++ M+S +++N L+ L       K      +  D +F  +         L  LH +G 
Sbjct: 544 PSQLTMESFKEMNKLRLLKIHNPRRKLFLENHLPRDFEFSAYE--------LRYLHWDGY 595

Query: 555 AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
            +  LP++      LV L+L++    ++      + K LR + LS    L + P      
Sbjct: 596 PLESLPMNFHA-KNLVELSLRDSNIKQVWRGNKLHDK-LRVIDLSHSVHLIRIP------ 647

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
            DLS           VP+       LE+L L  C NL  LP  I  LK L+TL+ +GC K
Sbjct: 648 -DLSS----------VPN-------LEILTLEGCVNLELLPRGIYKLKHLQTLSCNGCSK 689

Query: 675 LENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP-SLSGLCSLRKL 733
           LE  PE +  +  L  LD+SGTA+                    + LP S++ L  L+ L
Sbjct: 690 LERFPEIMANMRKLRVLDLSGTAI--------------------MDLPSSITHLNGLQTL 729

Query: 734 NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
            L +C+ +   +PS I  L SLK+L L    F S+P +I  LS+L  + L  C  L+ +P
Sbjct: 730 LLQECSKLH-QIPSHICYLSSLKKLNLEGGHFSSIPPTINQLSRLKALNLSHCNNLEQIP 788

Query: 794 QLPPNIRQVRVNGCA 808
           +LP     V+V  C 
Sbjct: 789 ELP----SVKVARCG 799


>gi|255563202|ref|XP_002522604.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223538080|gb|EEF39691.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1158

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 280/712 (39%), Positives = 405/712 (56%), Gaps = 50/712 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D + E+++ L+  G SDVR++GI GMGG+GKTT+A  V+  I+ +FE   FL N+ + S
Sbjct: 232 VDLQIERIKSLLLVGLSDVRVLGIWGMGGIGKTTLAGAVFKQIAFQFEGCCFLSNIGKES 291

Query: 61  SK-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            K GGL  L  +LLS++LK  +  +             L+  +VL+V+DDV +++QL+  
Sbjct: 292 QKCGGLTRLGEELLSKVLKEREVKLNTPDIRSSHFKEMLRHNRVLIVLDDVNNIEQLEYF 351

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG+  WFGSGSRI +TSRD+ LL T  VD  Y+   LNY++AL L    AFK   PL++ 
Sbjct: 352 AGDPCWFGSGSRIFVTSRDKQLLST-TVDVTYEVKELNYEDALHLVCWNAFKQKSPLEDF 410

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V L+  ++RYA G PLAL+VLGS L G+S  EW S L++L   P  +I DIL+ ++D L 
Sbjct: 411 VALTHLVVRYARGNPLALKVLGSMLYGKSKTEWGSALKKLTRAPHKDIQDILKFTYDNLD 470

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           + E  IFL IAC F+  DRD VT  L+GCGF   IGI  L++K L+T+  N L MHDLLQ
Sbjct: 471 DEELDIFLHIACLFESEDRDRVTQALDGCGFSADIGISTLVDKSLLTISKNKLKMHDLLQ 530

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G++IV RQ  +   +RSRLW  +++  VL E+TGTE + GI+L          L  + 
Sbjct: 531 EMGREIV-RQESKRPSERSRLWNPDDIYKVLEENTGTEAIVGILLGMSEARK---LELNR 586

Query: 360 KAFSKMTNLRLLKI------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
            AF++++NL+ L +            C +Q P GLE L  +LR L W GYPLKFLP+N  
Sbjct: 587 NAFTRISNLKFLILRMSNNCGGFEEECKVQFPEGLESLPQQLRYLYWHGYPLKFLPANFH 646

Query: 408 MDKTIEIYMCYSRIGELWKG------IKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLI 461
               IE+   YSR+  LW+G      I  L KL  M L  S+N+   P      +LE L 
Sbjct: 647 PTNLIELNFPYSRLEGLWEGDKVPSSIGQLTKLTFMSLRCSKNIRSFPTTIDLQSLETLD 706

Query: 462 LEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLP------GKILMKSLEKLN-LKSLPT 514
           L GC+ L +I P +  + + + LN    T++  +P       K+++ +++  N L+ +P+
Sbjct: 707 LSGCSNL-KIFPEVSRNIRYLYLNE---TAIQEVPLSIEHLSKLVVLNMKNCNELECIPS 762

Query: 515 TISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL 574
           TI  LK L  L +SG  K   FPEI+E   HL  L L+ TA+  LP +   L  L +LN 
Sbjct: 763 TIFKLKSLGVLILSGCKKLESFPEILETTNHLQHLSLDETAMVNLPDTFCNLKALNMLNF 822

Query: 575 KNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSI 634
            +C  L  LP  + NLK L  L+  GC+ L   P  ++ +  + EL L G++   +P+ I
Sbjct: 823 SDCSKLGKLPKNMKNLKSLAELRAGGCN-LSTLPADLKYLSSIVELNLSGSNFDTMPAGI 881

Query: 635 ELLTKLELLNLSDCKNLVRLPS--------------SIIALKSLKTLNLSGC 672
             L+KL  +N++ CK L  LP               S++++  LK L   GC
Sbjct: 882 NQLSKLRWINVTGCKRLQSLPELPPRIRYLNARDCRSLVSISGLKQLFELGC 933



 Score =  189 bits (480), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 138/391 (35%), Positives = 209/391 (53%), Gaps = 34/391 (8%)

Query: 542  HMEHLSELHLEGTAIRGL------PLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
            H  +L EL+   + + GL      P SI  L+ L  ++L+  +++   P T+ +L+ L +
Sbjct: 646  HPTNLIELNFPYSRLEGLWEGDKVPSSIGQLTKLTFMSLRCSKNIRSFPTTI-DLQSLET 704

Query: 596  LKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
            L LSGCS LK FPE+ R+++    L+L+ T+I+EVP SIE L+KL +LN+ +C  L  +P
Sbjct: 705  LDLSGCSNLKIFPEVSRNIR---YLYLNETAIQEVPLSIEHLSKLVVLNMKNCNELECIP 761

Query: 656  SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIP----IN 711
            S+I  LKSL  L LSGC KLE+ PE L     L+ L +  TA+ +    +  +     +N
Sbjct: 762  STIFKLKSLGVLILSGCKKLESFPEILETTNHLQHLSLDETAMVNLPDTFCNLKALNMLN 821

Query: 712  LMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPT 770
                S   KLP ++  L SL +L    CNL    LP+D+  L S+ EL LS ++F ++P 
Sbjct: 822  FSDCSKLGKLPKNMKNLKSLAELRAGGCNL--STLPADLKYLSSIVELNLSGSNFDTMPA 879

Query: 771  SITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCK-------SD 823
             I  LSKL  I +  CKRLQSLP+LPP IR +    C SLV++    +L +        D
Sbjct: 880  GINQLSKLRWINVTGCKRLQSLPELPPRIRYLNARDCRSLVSISGLKQLFELGCSNSLDD 939

Query: 824  STMI--ACL--------DSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWF 873
             T +   C         D L     K   F+M R++ +        +    PG+EIPEWF
Sbjct: 940  ETFVFTNCFKLDQDNWADILASAQLKIQHFAMGRKHYDRELYDETFICFTYPGTEIPEWF 999

Query: 874  MYQNEGSSITVTRPSNLYNKKKLVGYAICCV 904
              ++ GSS+T+      +   + +G+++C V
Sbjct: 1000 ADKSIGSSVTIQHLPPDWLNHRFLGFSVCLV 1030


>gi|357516577|ref|XP_003628577.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355522599|gb|AET03053.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1406

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 347/1022 (33%), Positives = 511/1022 (50%), Gaps = 144/1022 (14%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            ++ R EK+  L+   S++V+++G+ GMGG+GKTT+A+ +++     FE   F+ NVR+ +
Sbjct: 194  INERVEKVINLLQLQSNNVKVLGLYGMGGVGKTTLAKALFNSFVGRFERRCFISNVRQFA 253

Query: 61   SKG-GLVSLQRQLLSQLLKLADNS--IWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
            SK  GLVS+Q  ++  L         I +V  GI  +   ++  +VLLV+DDV  V QL 
Sbjct: 254  SKDDGLVSIQNNIIKDLSSQEGTRSFISDVKVGISTIKRIVRENRVLLVLDDVDHVNQLD 313

Query: 118  SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
            +L G REWF  GS IIIT+RD  +L    V+E+Y+   L  +EAL+LF+  A +   P  
Sbjct: 314  ALIGKREWFHEGSCIIITTRDTTVLPEKHVNELYEVTELYAEEALELFSYHALRKKDPPP 373

Query: 178  ECVQLSARIIRYAGGLPLALEVLGSFLSG-RSVDEWRSTLERLEIEPPSEILDILQISFD 236
            + +  S +I+   G +PLALEV G FL G R VDEW   +++L+   P  + D+L+IS+D
Sbjct: 374  DFLSFSKQIVSLTGRMPLALEVFGCFLFGKRRVDEWEDVVKKLKTIRPGNLHDVLKISYD 433

Query: 237  GLQELEKKIFLDIACFF--KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLW 293
            GL E EK IFLDIACFF   G  RD V + L GCGF   I   VL+EKCLI V  +NTLW
Sbjct: 434  GLDEQEKCIFLDIACFFVQMGMKRDDVIDVLRGCGFRGEIATTVLVEKCLIKVREDNTLW 493

Query: 294  MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD-------- 345
            MHD ++++G+QIV  ++  + G RSRLW   E+  VL    GT  ++GIVLD        
Sbjct: 494  MHDQIRDMGRQIVLDENHVDPGMRSRLWDRAEIMSVLKSKKGTRCIQGIVLDFKERSNQW 553

Query: 346  --NYHHE------NEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGY 397
              NY  +      N+V L    K+F  M +LRLL+I NL L    ++L + L+ L WRG 
Sbjct: 554  SKNYPPQPQAEKYNQVML--DTKSFEPMVSLRLLQINNLSLEG--KFLPDELKWLQWRGC 609

Query: 398  PLKFLP-SNLQMDKTIEIYMCYSRIGELW--KGIKHLDKLKVMILSHSENLIRMPDFTGA 454
            PL+ +    L  +  +       +I  LW  K  K  + L VM LS+   L  +PD +  
Sbjct: 610  PLECISLDTLPRELAVLDLSNGQKIKSLWGLKSQKVPENLMVMNLSNCYQLAAIPDLSWC 669

Query: 455  PNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKIL-MKSLEKL------ 507
              LEK+ L  C  L  IH S+     L  LN+  C +LI LP  +  +K LE L      
Sbjct: 670  LGLEKINLANCINLTRIHESIGSLTTLRNLNLTRCENLIELPSDVSGLKHLESLILSECS 729

Query: 508  NLKSLPTTISGLKCLSTL--DVSGDLK---------------------FREFPEIVEHME 544
             LK+LP  I  LK L TL  D +  +K                      R  P+ +  + 
Sbjct: 730  KLKALPENIGMLKSLKTLAADKTAIVKLPESIFRLTKLERLVLDRCSHLRRLPDCIGKLC 789

Query: 545  HLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKC------------ 592
             L EL L  T ++ LP ++  L  L  L+L  C  L ++P ++ NL+             
Sbjct: 790  ALQELSLYETGLQELPNTVGFLKNLEKLSLMGCEGLTLMPDSIGNLESLTELLASNSGIK 849

Query: 593  -----------LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLE 641
                       LR+L +  C KL K P+  +++  + EL LDGT I+ +P  I  L +L 
Sbjct: 850  ELPSTIGSLSYLRTLLVRKC-KLSKLPDSFKTLASIIELDLDGTYIRYLPDQIGELKQLR 908

Query: 642  LLNLSDCKNLVRLPSSIIALKSLKTLN-----------------------LSGCFKLENV 678
             L + +C NL  LP SI  L SL TLN                       LS C  L+ +
Sbjct: 909  KLEIGNCSNLESLPESIGYLTSLNTLNIINGNIRELPVSIGLLENLVNLTLSRCRMLKQL 968

Query: 679  PETLGQIESLEELDISGTAV---PHSTSWYS------------YIPINLMRKSVALKLPS 723
            P ++G ++SL  L +  TA+   P S    S             +PI++      +  PS
Sbjct: 969  PASIGNLKSLCHLKMEETAMVDLPESFGMLSSLRTLRMAKRPHLVPISVKNTGSFVLPPS 1028

Query: 724  LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIEL 783
               L  L +L+     L  G +P D   L  L+ L L +N+F SLP+S+  LS L  + L
Sbjct: 1029 FCNLTLLHELDARAWRL-SGKIPDDFEKLSLLETLKLDQNNFHSLPSSLKGLSILKELSL 1087

Query: 784  EDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKL----------CK--SDSTMIACLD 831
             +C  L SLP LP ++ ++  + C +L T+ D   L          C+  +D   + CL 
Sbjct: 1088 PNCTELISLPLLPSSLIKLNASNCYALETIHDMSSLESLEELELTNCEKVADIPGLECLK 1147

Query: 832  SLKLL---GNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPS 888
            SLK L   G  + +  + +   +      ++LS  +PG+++PEWF     G +++ +   
Sbjct: 1148 SLKRLYLSGCNACSSKVCKRLSKVALRNFENLS--MPGTKLPEWF----SGETVSFSNRK 1201

Query: 889  NL 890
            NL
Sbjct: 1202 NL 1203


>gi|193584702|gb|ACF19651.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago sativa]
          Length = 1125

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 245/567 (43%), Positives = 355/567 (62%), Gaps = 24/567 (4%)

Query: 1   MDSRCEKLRFLMDSG-SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR + +  L+D+  ++DV ++G+ GMGG+GKTTIA+ +Y+ I   FE   F+ N+RE+
Sbjct: 242 VESRVQDMIQLLDTQQTNDVLLLGMWGMGGIGKTTIAKAIYNKIGRNFEGRSFIANIREV 301

Query: 60  SSKG-GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
             K  G V+LQ QL+  + K     I NV  GI +L  RL  K+VLLV+DDV  + QL +
Sbjct: 302 WEKDCGQVNLQEQLMYDIFKETTTKIQNVESGISILKGRLCHKRVLLVLDDVSKLDQLNA 361

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G+ +WF  GSRIIIT+RD+H+L+ + VD +Y    ++  E+L+LF+  AFK   P ++
Sbjct: 362 LCGSCKWFAPGSRIIITTRDKHVLRGNRVDRIYIMKEMDETESLELFSWHAFKQTSPTED 421

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             ++S  ++ Y+GGLPLALEVLGS+L  R V EW   LE+L+I P  ++ + L+IS+DGL
Sbjct: 422 FSEISKNVVMYSGGLPLALEVLGSYLFDREVLEWVCVLEKLKIIPNHQLHEKLKISYDGL 481

Query: 239 Q-ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHD 296
             + EK  FLDIACFF G DR+ V   L GCGF   IGI VL+E+ L+TV + N L MHD
Sbjct: 482 NDDTEKSTFLDIACFFIGMDRNDVIQILNGCGFFAEIGISVLVERSLVTVDDKNKLGMHD 541

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL+++G++I++ +SP E  +RSRLW +E+V  VL+E TGT+ VEG+ L    H  + +  
Sbjct: 542 LLRDMGREIIREKSPMEPEERSRLWFQEDVLDVLSEHTGTKAVEGLTLKLPGHNAQRF-- 599

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            S KAF  M  LRLL++  +QL    +YLS  LR L W G+PL  LPSN      + I +
Sbjct: 600 -STKAFENMKKLRLLQLSGVQLDGDFKYLSRNLRWLHWNGFPLTCLPSNFYQRNIVSIEL 658

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             S +  LWK ++ +++LK++ LSHS  L + PDF+  PNLEKLIL+ C RL E+  S+ 
Sbjct: 659 ENSNVKLLWKEMQRMEQLKILNLSHSHYLTQTPDFSNMPNLEKLILKDCPRLSEVSQSIG 718

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
              K++++++KDC SL                  +LP  I  LK L TL +SG LK  + 
Sbjct: 719 HLKKVLLISLKDCISLC-----------------NLPRNIYSLKSLKTLILSGCLKIDKL 761

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSI 563
            E +E M+ L+ L    T I  +P S+
Sbjct: 762 EEDLEQMKSLTTLMAGNTGITKVPFSV 788



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 178/388 (45%), Gaps = 42/388 (10%)

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
           LS + + GD K+           +L  LH  G  +  LP +      +V + L+N  +++
Sbjct: 615 LSGVQLDGDFKYLS--------RNLRWLHWNGFPLTCLPSNF-YQRNIVSIELENS-NVK 664

Query: 582 ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKL 640
           +L   +  ++ L+ L LS    L + P+   +M +L +L L D   + EV  SI  L K+
Sbjct: 665 LLWKEMQRMEQLKILNLSHSHYLTQTPDF-SNMPNLEKLILKDCPRLSEVSQSIGHLKKV 723

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
            L++L DC +L  LP +I +LKSLKTL LSGC K++ + E L Q++SL  L    T +  
Sbjct: 724 LLISLKDCISLCNLPRNIYSLKSLKTLILSGCLKIDKLEEDLEQMKSLTTLMAGNTGI-- 781

Query: 701 STSWYSYIPINLMRKSVALKLPSLSGLCSLRK-------LNLTDCNLMEGALPSDIGN-L 752
                + +P +++R S ++   SL G     +        +    N    +LP    + +
Sbjct: 782 -----TKVPFSVVR-SKSIGFISLCGYEGFSRDVFPSIIWSWMSPNHQGFSLPVQTASGM 835

Query: 753 CSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI---------RQVR 803
            SL  L  S + F  L +  T L KL ++ L+    LQ L Q    I          +++
Sbjct: 836 SSLVSLDASTSIFHDLSSISTVLPKLQSLWLKCGSELQ-LSQDATQILNALSAASSVELQ 894

Query: 804 VNGCASLVTLLDALKLCKSDSTMIACLDSLKLL----GNKSLAFSMLREYLEAVSNTRQH 859
            +  AS V  + +L  C+S   +    +S K L    G  SL  ++L+E +        +
Sbjct: 895 SSATASQVPDVHSLIECRSQVQVSTTTNSRKSLLFQMGMNSLIANILKERILQNLTVEDY 954

Query: 860 LSVVVPGSEIPEWFMYQNEGSSITVTRP 887
            S  +P    P+W  + +EGSS+    P
Sbjct: 955 GSFSLPCDNYPDWLAFNSEGSSVIFEVP 982


>gi|357471111|ref|XP_003605840.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
 gi|355506895|gb|AES88037.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
          Length = 1264

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 351/983 (35%), Positives = 503/983 (51%), Gaps = 142/983 (14%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +D     L   M  GS +V MIG+ GMGG+GKTTIA  ++DL S +FE   FL+N+ + S
Sbjct: 194  IDKHYAHLESFMSIGSKEVGMIGMWGMGGIGKTTIAAAIFDLFSSQFEGCCFLENIGDES 253

Query: 61   SKGGLVSLQRQLLSQLLKLADN-SIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
             + GL  L  +LL+ LL+  +N  +  V  G +   SRL  KKVL+V+DDV  ++QL  L
Sbjct: 254  ERHGLNFLHNKLLTMLLEEKENVHVGTVRIGFNYSKSRLSHKKVLIVLDDVRTIEQLDFL 313

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
             G     G GSR+I+T+RD+H L      E+Y+   LN+ E+LQLF++ AFK   P    
Sbjct: 314  VGAHTCLGPGSRVIVTARDKHAL-IERAHEIYEVKPLNFHESLQLFSLSAFKKVCPDIGY 372

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             QLS  ++ YAGG+PLAL+VLGS  S +S + W+ST+ +L+  P  EI +IL++S+DGL 
Sbjct: 373  QQLSESVVNYAGGIPLALKVLGSLFSYKSKEIWQSTMTKLKKIPCREIQNILRLSYDGLD 432

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLL 298
            + EK+IFLDIACF  G DR +VT  L+ CGF+ V G+  L+EK LIT  +NN + MH L+
Sbjct: 433  DTEKEIFLDIACFLNGKDRQHVTRLLDACGFYAVPGLETLLEKALITFSNNNQVQMHALI 492

Query: 299  QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
            QE+G++IV+++S ++ G+RSRL+  EEV  VL  + GT  +EGI LD    ++   +  S
Sbjct: 493  QEMGREIVRQESTKDPGRRSRLYDHEEVYDVLKNNMGTSAIEGISLDVSQIKD---MNLS 549

Query: 359  AKAFSKMTNLRLLKI-------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
            +  F KM NLR LK        C++ LP GL+  SN+LR L W  YPLK LPS+   +K 
Sbjct: 550  SDIFVKMINLRFLKFYSRSGERCSVSLPAGLKSFSNKLRYLHWSAYPLKSLPSSFSPEKL 609

Query: 412  IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
            +E+YM  SR+  LW+G++ L  LK M LS  ENLI +PDF+ A NL+ + L  C RL  +
Sbjct: 610  VELYMPNSRVKRLWEGVQDLTNLKKMDLSCCENLIELPDFSMASNLQTVNLSRCVRLRHV 669

Query: 472  HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDL 531
            H S+L   KL+ LN+  C                  NLKSL +  + L  L  L++ G  
Sbjct: 670  HASILSLQKLVNLNLVWCK-----------------NLKSLLSN-TPLNSLRILELYGCS 711

Query: 532  KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
              +EF    E M +L    L  TAI  LP S++ L  L+ L L +C  L  LP   S LK
Sbjct: 712  SLKEFSVTSEEMTYLD---LRCTAINELPPSVKYLGRLMNLELSSCVRLRNLPNEFSCLK 768

Query: 592  CLRSLKLSGCSKLKKFPEIVRSMKDLSELFL--DGTSIKEVPSSIELLTKLELLNLSDCK 649
             L  L LS C+ L           D S L L  DG            L  L  L L +C 
Sbjct: 769  SLGRLVLSDCTLL-----------DTSNLHLLFDG------------LRSLGYLCLDNCC 805

Query: 650  NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIP 709
            NL  LP +I  L SL  L+LSG   ++N+P+++  +  LE LD+             Y+P
Sbjct: 806  NLTELPHNISLLSSLYYLSLSGS-NVKNIPKSIKHLSQLESLDLCKCMS------IQYLP 858

Query: 710  INLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLP 769
                      +LP      S+  L++T+C  +E           ++ EL      F+S  
Sbjct: 859  ----------ELPP-----SIEVLDVTNCTSLETVFTCP-----AIDELLQEHKVFISFK 898

Query: 770  TSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIAC 829
                       +EL +  R                NG      +LDA    K  + +   
Sbjct: 899  NC---------VELNEYSR----------------NG-----IMLDAQVRLKEAAYVDV- 927

Query: 830  LDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSN 889
              S K+ G++S      +   EA S+     +V+ PGS +P+WF Y++  +SIT+    +
Sbjct: 928  --SAKIEGSESDPCFFFKS--EATSSYHHPPTVICPGSRVPDWFHYRSTEASITIELSVS 983

Query: 890  LYNKKKLVGYAICCVF-HVLKNSRGNNCFGSYPTHQLNCHIGHGIY---GIGFRD----K 941
               +  + G+  C +    L N +            LN  IG   Y   G   R+     
Sbjct: 984  HSPQSNIFGFIFCLILPQSLPNEKN-----------LNWKIGCECYMEGGENIRNTSMCS 1032

Query: 942  FGQA-GSDHLWLLYLSRQTCYDI 963
            F     SDH++L Y     C+D+
Sbjct: 1033 FATGLVSDHVYLWY-DENFCFDM 1054


>gi|147853075|emb|CAN83385.1| hypothetical protein VITISV_004581 [Vitis vinifera]
          Length = 1024

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 255/574 (44%), Positives = 356/574 (62%), Gaps = 47/574 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           + SR +KLR L+   S DVRM+GICGMGG+GKTT+AR +Y  +S++FEA  FL+   +  
Sbjct: 191 IQSRIQKLRMLLCLQSDDVRMVGICGMGGIGKTTLARAIYSQVSNQFEACSFLEIANDFK 250

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            +  L SL  +LLSQLL+  +  I     G   + +RL  +KVL+V+D+V ++  L+ LA
Sbjct: 251 EQD-LTSLAEKLLSQLLQEENLKI----KGSTSIKARLHSRKVLVVLDNVNNLTILEHLA 305

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           GN++WFG GSRII+T+RD+ LL  H VD  Y+    N DEA +     + K Y+ L+  +
Sbjct: 306 GNQDWFGQGSRIIVTTRDQRLLIQHKVD-YYEVAEFNGDEAFEFLKHHSLK-YELLENDL 363

Query: 181 Q-LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           Q LS  II YA GLPLAL VLGS L G + DEWR  L +L+  P  EI ++L++S+D L 
Sbjct: 364 QELSREIIFYAKGLPLALRVLGSLLFGMNKDEWRDYLVKLKSTPNIEIQEVLRLSYDRLD 423

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLL 298
           + EK IFLDIACFFKG D+D+V   L+GCGF    GI+ LI K LIT++  N L MHDL+
Sbjct: 424 DEEKNIFLDIACFFKGEDKDHVVEILKGCGFSAKCGIKTLINKSLITINFANKLEMHDLI 483

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           QE+G+ IV+++ P+E  +RSRLW+ E++  VL  + G+E +EGI L+  H E+   L  +
Sbjct: 484 QEMGKGIVRQECPKEPERRSRLWEHEDIFDVLKRNMGSEKIEGIFLNLSHLEDT--LDFT 541

Query: 359 AKAFSKMTNLRLLKI-------------------CNLQLPNGLEYLSNRLRLLGWRGYPL 399
            +AF+ M  LRLLK+                   C ++  +  ++ SN LR L W GY L
Sbjct: 542 IEAFAGMKKLRLLKVYNSKSISRDFRDTFNNKVNCRVRFAHEFKFCSNDLRYLYWHGYSL 601

Query: 400 KFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEK 459
           K LP +      +E+ M YS I +LWKGIK L++LK + LSHS+ LI+ PDF+G  NLE+
Sbjct: 602 KSLPKDFSPKHLVELSMPYSHIKKLWKGIKVLERLKSIDLSHSKYLIQTPDFSGITNLER 661

Query: 460 LILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGL 519
           L+LEGC  L ++HPSL +  KL  L++K+CT                  L+ LP++   L
Sbjct: 662 LVLEGCINLPKVHPSLGVLKKLNFLSLKNCTM-----------------LRRLPSSTCSL 704

Query: 520 KCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG 553
           K L T  +SG  KF EFPE   ++E L ELH +G
Sbjct: 705 KSLETFILSGCSKFEEFPENFGNLEMLKELHADG 738



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 2/107 (1%)

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDC 648
           L+ L+S+ LS    L + P+    + +L  L L+G  ++ +V  S+ +L KL  L+L +C
Sbjct: 633 LERLKSIDLSHSKYLIQTPDF-SGITNLERLVLEGCINLPKVHPSLGVLKKLNFLSLKNC 691

Query: 649 KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
             L RLPSS  +LKSL+T  LSGC K E  PE  G +E L+EL   G
Sbjct: 692 TMLRRLPSSTCSLKSLETFILSGCSKFEEFPENFGNLEMLKELHADG 738



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 7/140 (5%)

Query: 491 SLITLPGKILMKSLEKLNL-----KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEH 545
           SL +LP     K L +L++     K L   I  L+ L ++D+S      + P+    + +
Sbjct: 600 SLKSLPKDFSPKHLVELSMPYSHIKKLWKGIKVLERLKSIDLSHSKYLIQTPDF-SGITN 658

Query: 546 LSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKL 604
           L  L LEG   +  +  S+ +L  L  L+LKNC  L  LP +  +LK L +  LSGCSK 
Sbjct: 659 LERLVLEGCINLPKVHPSLGVLKKLNFLSLKNCTMLRRLPSSTCSLKSLETFILSGCSKF 718

Query: 605 KKFPEIVRSMKDLSELFLDG 624
           ++FPE   +++ L EL  DG
Sbjct: 719 EEFPENFGNLEMLKELHADG 738



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 67/299 (22%), Positives = 107/299 (35%), Gaps = 61/299 (20%)

Query: 710  INLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS-L 768
            I+L      ++ P  SG+ +L +L L  C  +    PS +G L  L  L L   + +  L
Sbjct: 639  IDLSHSKYLIQTPDFSGITNLERLVLEGCINLPKVHPS-LGVLKKLNFLSLKNCTMLRRL 697

Query: 769  PTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIA 828
            P+S   L  L    L  C + +  P+   N+                             
Sbjct: 698  PSSTCSLKSLETFILSGCSKFEEFPENFGNLE---------------------------- 729

Query: 829  CLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPS 888
                            ML+E L A         VV+PGS IP+W  YQ+  + I    P 
Sbjct: 730  ----------------MLKE-LHADGIVDSTFGVVIPGSRIPDWIRYQSSRNVIEADLPL 772

Query: 889  NLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGF-RDKFGQAGS 947
            N       +G+A+  VF        ++ F +               GI F  +    A  
Sbjct: 773  NW--STNCLGFALALVFGGRFPVAYDDWFWARVFLDFGTCRRSFETGISFPMENSVFAEG 830

Query: 948  DHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPW-LGQGLEVKMCGLHPVYMDE 1005
            DH+ L +           P++ +L P +  H+  +F    +    E+K CGL  +Y++E
Sbjct: 831  DHVVLTF----------APVQPSLSPHQVIHIKATFAIMSVPNYYEIKRCGLGLMYVNE 879


>gi|224131070|ref|XP_002328446.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838161|gb|EEE76526.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1272

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 368/1117 (32%), Positives = 545/1117 (48%), Gaps = 135/1117 (12%)

Query: 1    MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            M+SR E +  L+  GS+  V ++GI GM G+GK+T A  VY     +FE   F  NVRE 
Sbjct: 192  MESRVEDIESLLSFGSTGTVLIVGIWGMCGIGKSTTAEAVYHRNRSKFEGHCFFQNVREE 251

Query: 60   SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            S K G+  +++++L  +L   D  I         +   LQRKKVL+V DDV D + L+ L
Sbjct: 252  SQKHGVDQVRQEILGMVLGKNDLKICGKVLP-SAIKRMLQRKKVLIVFDDVDDARDLKYL 310

Query: 120  AGNREWFGSGSRIIITSRDEH-LLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
             G    FG GSRII+TSRD   L+     D++Y+   L  ++AL+LF++ AFK   P++ 
Sbjct: 311  LGEDGLFGQGSRIIVTSRDRQVLINACDEDKIYQVKILVKEDALRLFSLHAFKQNNPIEG 370

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGR-SVDEWRSTLERLEIEPPSEILDILQISFDG 237
             + LS  ++    G+PL LEVLG+ L  + S++ W S + +L      +I   L++ +  
Sbjct: 371  YIGLSKTVVSCVQGIPLVLEVLGASLYKKTSLEYWESKVAQLRTTGGEDIKKCLEMCYHE 430

Query: 238  LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDL 297
            L + EKKIFLDIACFF    RD +   L+        GI  L + CLI +  + +WMHD+
Sbjct: 431  LDQTEKKIFLDIACFFGRCKRDLLQQTLD---LEESSGIDRLADMCLIKIVQDKIWMHDV 487

Query: 298  LQELGQQIVQRQS--PEELGKRSRLWKEEEVCHVLT-ESTGTELVEGI--VLDNYHHENE 352
            L  LGQ+IV R++  P E   RSRLW+ E+VC VLT + T    VE I  +LD       
Sbjct: 488  LLILGQEIVLRENVDPRE---RSRLWRAEDVCRVLTTQGTTGSKVESISLILDATKE--- 541

Query: 353  VYLCASAKAFSKMTNLRLLKI-------------------CNLQLPNGLEYLSNRLRLLG 393
              L  S  AF  M NLRLLKI                     + LP GL +LS+ LR L 
Sbjct: 542  --LRLSPTAFEGMYNLRLLKIYYPPFLKDPSKEKIMIRTRIGIHLPRGLHFLSSELRFLY 599

Query: 394  WRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSEN---LIRMPD 450
            W  YPLK LPSN   +K +++ M  S++ +LW          +    HS++   L  +P+
Sbjct: 600  WYNYPLKSLPSNFFPEKLVQLEMPCSQLEQLWN---EGQTYHIRAFHHSKDCSGLASLPN 656

Query: 451  FTGA-PNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI-LMKSLEKL- 507
              G   +L KL L+GC+RL  +  S+     L  L +KDC+ L TLP  I  +KSL+ L 
Sbjct: 657  SIGELKSLTKLNLKGCSRLATLPDSIGELKSLDSLYLKDCSGLATLPDSIGELKSLDSLY 716

Query: 508  -----NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPL 561
                  L +LP +I  LK L +L + G       P+ +  ++ L  L+L G + +  LP 
Sbjct: 717  LGGCSGLATLPESIGELKSLDSLYLRGCSGLASLPDSIGELKSLDSLYLGGCSGLATLPD 776

Query: 562  SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
            SI  L  L  L L+ C  L  LP ++  LK L SL L GCS L   P  +  +K L  L+
Sbjct: 777  SIGELKSLDSLYLRGCSGLATLPDSIGELKSLDSLYLGGCSGLASLPNSIGELKSLDSLY 836

Query: 622  LDGTS----------IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSG 671
            L G S          +  +P SI  L  L  L LS C  L  LP SI  LKSL  L L G
Sbjct: 837  LRGCSGLASLPDSIGLASLPDSIGELKSLIWLYLSSCLGLESLPDSICELKSLSYLYLQG 896

Query: 672  CFKLENVPETLGQIESLEELDISG----TAVPHST-SWYSYIPINLM----RKSVALKLP 722
            C +L  +P  +G+++SL++L + G     ++P++  S  + +P N++    R        
Sbjct: 897  CSRLATLPNKIGELKSLDKLCLEGCSGLASLPNNICSGLASLPNNIIYLEFRGLDKQCCY 956

Query: 723  SLSGLCSLRKLNLTDCNL-------MEGA----LPSDIGNLCSLKELYLSKNSFVSLPTS 771
             LSG   + ++ L+   L       +E +     P  +G+L SL +L LSK  F  +P S
Sbjct: 957  MLSGFQKVEEIALSTNKLGCHEFLNLENSRVLKTPESLGSLVSLTQLTLSKIDFERIPAS 1016

Query: 772  ITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDAL-------KLCKSDS 824
            I HL+ L N+ L+DCK LQ LP+LP  ++ +  +GC SL ++           K    + 
Sbjct: 1017 IKHLTSLHNLYLDDCKWLQCLPELPLTLQVLIASGCISLKSVASIFMQGDREYKAASQEF 1076

Query: 825  TMIACLD-----SLKLLGNKSLAFSMLRE---YLEAVSNTRQHLSVVVPGSEIPEWFMYQ 876
                CL        +++G   L    +      LE      + + + +PGSE+PEWF Y+
Sbjct: 1077 NFSECLQLDQNSRTRIMGAARLRIQRMATSLFSLEYHGKPLKEVRLCIPGSEVPEWFSYK 1136

Query: 877  N-EGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTH-QLNCHIGHGIY 934
            N EGSS+ + +P+  +      G+  C V    +N          P + +  CH+     
Sbjct: 1137 NREGSSVKIWQPAQWHR-----GFTFCAVVSFGQNEERR------PVNIKCECHLIS--- 1182

Query: 935  GIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFE--------PW 986
                +D      S + + LY  +     +R   E       S H    F+        PW
Sbjct: 1183 ----KDGTQIDLSSYYYELYEEK-----VRSLWEREHVFIWSVHSKCFFKEASFQFKSPW 1233

Query: 987  LGQGLEVKMCGLHPVYMDEVEELDQTTNQPSRFTVYN 1023
             G    V  CG+HP+ ++E E+ +  T+   +F  Y+
Sbjct: 1234 -GASDVVVGCGVHPLLVNEPEQPNPKTD--GKFLTYS 1267


>gi|51477387|gb|AAU04760.1| MRGH12 [Cucumis melo]
          Length = 1007

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 315/832 (37%), Positives = 449/832 (53%), Gaps = 93/832 (11%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-I 59
           M+ R +K+  LM  G  D R IGI GMGG+GKTTIA+ V+  ++ EF  S  L+NV++ +
Sbjct: 199 MNLRLKKMNMLMGIGLDDKRFIGIWGMGGIGKTTIAKAVFKSVAREFHGSCILENVKKTL 258

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            +  GLVSLQ +LLS  L      I +  +G++M+   L  +KV +V+DDV    Q++ L
Sbjct: 259 KNVRGLVSLQEKLLSDTLMRGKVQIKDG-EGVEMIKKNLGNRKVFVVLDDVDHFSQVKDL 317

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  EWFG GSRIIIT+RDE LL + G+D  Y       +EALQLF  +AF    P +  
Sbjct: 318 AGGEEWFGCGSRIIITTRDEGLLLSLGIDIRYNVESFGDEEALQLFCHEAFGVKFPKKGY 377

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           + L    + YA GLPLA++ LG  L  R    W   + +L      ++ + L+IS+D L 
Sbjct: 378 LDLCMPFVEYAEGLPLAIKALGHSLHNRLFKSWEGAIRKLNNSLNRQVYENLKISYDALG 437

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIG--------------------IRVL 279
           + E++IFL IACF KG  +D V +           G                    ++ L
Sbjct: 438 KEERRIFLYIACFLKGQSKDQVIDTFVSFEIDAADGLLTRKKAADVLCIKETAADALKKL 497

Query: 280 IEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELV 339
            EK LITV N+ + MH+L Q+LGQ+I + +S     K SRLW  E++ H L    G E +
Sbjct: 498 QEKSLITVVNDKIQMHNLHQKLGQEIFREESSR---KSSRLWHREDMNHALRHKQGVEAI 554

Query: 340 EGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPL 399
           E I LD+  H  E +L  + K FS MT L++L++ N+ L   LEYLS++LRLL W GYP 
Sbjct: 555 ETIALDSNEH-GESHL--NTKFFSAMTGLKVLRVHNVFLSGDLEYLSSKLRLLSWHGYPF 611

Query: 400 KFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEK 459
           + LPS+ Q ++ +E+ +  S I   W+  + LDKLKV+ LS+S+ L++ PD +  PNLE+
Sbjct: 612 RNLPSDFQPNELLELNLQNSCIENFWRETEKLDKLKVINLSNSKFLLKTPDLSTVPNLER 671

Query: 460 LILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGL 519
           L+L GC RL E+H S+ +   LI L++KDC S                 LKS+ + IS L
Sbjct: 672 LVLNGCIRLQELHLSVGILKHLIFLDLKDCKS-----------------LKSICSNIS-L 713

Query: 520 KCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRS 579
           + L  L +SG  +   FPEIV +M+ L+ELHL+GTAIR L  SI  L+ LVLL+L+NC++
Sbjct: 714 ESLKILILSGCSRLENFPEIVGNMKLLTELHLDGTAIRKLHASIGKLTSLVLLDLRNCKN 773

Query: 580 LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTK 639
           L  LP  +  L  ++ L L GCSKL + P+ + ++  L +L + GTSI  +P S+ LLT 
Sbjct: 774 LLTLPNAIGCLTSIKHLALGGCSKLDQIPDSLGNISCLKKLDVSGTSISHIPLSLRLLTN 833

Query: 640 LELLNLSDCKNLVR-LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
           L+ LN   CK L R L  S+  L S    N S  F L  +        S++ L+ S   +
Sbjct: 834 LKALN---CKGLSRKLCHSLFPLWSTPRNNNSHSFGLRLIT-CFSNFHSVKVLNFSDCKL 889

Query: 699 PHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKEL 758
                    IP              LS L SL  L+L                       
Sbjct: 890 ADGD-----IP------------DDLSCLSSLHFLDL----------------------- 909

Query: 759 YLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
             S+N F +LP S+  L  L  + L++C RL+SLP+ P ++  V    C SL
Sbjct: 910 --SRNLFTNLPNSLGQLINLRCLVLDNCSRLRSLPKFPVSLLYVLARDCVSL 959


>gi|357515077|ref|XP_003627827.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
 gi|355521849|gb|AET02303.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
          Length = 1266

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 351/983 (35%), Positives = 503/983 (51%), Gaps = 142/983 (14%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +D     L   M  GS +V MIG+ GMGG+GKTTIA  ++DL S +FE   FL+N+ + S
Sbjct: 194  IDKHYAHLESFMSIGSKEVGMIGMWGMGGIGKTTIAAAIFDLFSSQFEGCCFLENIGDES 253

Query: 61   SKGGLVSLQRQLLSQLLKLADN-SIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
             + GL  L  +LL+ LL+  +N  +  V  G +   SRL  KKVL+V+DDV  ++QL  L
Sbjct: 254  ERHGLNFLHNKLLTMLLEEKENVHVGTVRIGFNYSKSRLSHKKVLIVLDDVRTIEQLDFL 313

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
             G     G GSR+I+T+RD+H L      E+Y+   LN+ E+LQLF++ AFK   P    
Sbjct: 314  VGAHTCLGPGSRVIVTARDKHAL-IERAHEIYEVKPLNFHESLQLFSLSAFKKVCPDIGY 372

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             QLS  ++ YAGG+PLAL+VLGS  S +S + W+ST+ +L+  P  EI +IL++S+DGL 
Sbjct: 373  QQLSESVVNYAGGIPLALKVLGSLFSYKSKEIWQSTMTKLKKIPCREIQNILRLSYDGLD 432

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLL 298
            + EK+IFLDIACF  G DR +VT  L+ CGF+ V G+  L+EK LIT  +NN + MH L+
Sbjct: 433  DTEKEIFLDIACFLNGKDRQHVTRLLDACGFYAVPGLETLLEKALITFSNNNQVQMHALI 492

Query: 299  QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
            QE+G++IV+++S ++ G+RSRL+  EEV  VL  + GT  +EGI LD    ++   +  S
Sbjct: 493  QEMGREIVRQESTKDPGRRSRLYDHEEVYDVLKNNMGTSAIEGISLDVSQIKD---MNLS 549

Query: 359  AKAFSKMTNLRLLKI-------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
            +  F KM NLR LK        C++ LP GL+  SN+LR L W  YPLK LPS+   +K 
Sbjct: 550  SDIFVKMINLRFLKFYSRSGERCSVSLPAGLKSFSNKLRYLHWSAYPLKSLPSSFSPEKL 609

Query: 412  IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
            +E+YM  SR+  LW+G++ L  LK M LS  ENLI +PDF+ A NL+ + L  C RL  +
Sbjct: 610  VELYMPNSRVKRLWEGVQDLTNLKKMDLSCCENLIELPDFSMASNLQTVNLSRCVRLRHV 669

Query: 472  HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDL 531
            H S+L   KL+ LN+  C                  NLKSL +  + L  L  L++ G  
Sbjct: 670  HASILSLQKLVNLNLVWCK-----------------NLKSLLSN-TPLNSLRILELYGCS 711

Query: 532  KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
              +EF    E M +L    L  TAI  LP S++ L  L+ L L +C  L  LP   S LK
Sbjct: 712  SLKEFSVTSEEMTYLD---LRCTAINELPPSVKYLGRLMNLELSSCVRLRNLPNEFSCLK 768

Query: 592  CLRSLKLSGCSKLKKFPEIVRSMKDLSELFL--DGTSIKEVPSSIELLTKLELLNLSDCK 649
             L  L LS C+ L           D S L L  DG            L  L  L L +C 
Sbjct: 769  SLGRLVLSDCTLL-----------DTSNLHLLFDG------------LRSLGYLCLDNCC 805

Query: 650  NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIP 709
            NL  LP +I  L SL  L+LSG   ++N+P+++  +  LE LD+             Y+P
Sbjct: 806  NLTELPHNISLLSSLYYLSLSGS-NVKNIPKSIKHLSQLESLDLCKCMS------IQYLP 858

Query: 710  INLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLP 769
                      +LP      S+  L++T+C  +E           ++ EL      F+S  
Sbjct: 859  ----------ELPP-----SIEVLDVTNCTSLETVFTCP-----AIDELLQEHKVFISFK 898

Query: 770  TSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIAC 829
                       +EL +  R                NG      +LDA    K  + +   
Sbjct: 899  NC---------VELNEYSR----------------NG-----IMLDAQVRLKEAAYVDV- 927

Query: 830  LDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSN 889
              S K+ G++S      +   EA S+     +V+ PGS +P+WF Y++  +SIT+    +
Sbjct: 928  --SAKIEGSESDPCFFFKS--EATSSYHHPPTVICPGSRVPDWFHYRSTEASITIELSVS 983

Query: 890  LYNKKKLVGYAICCVF-HVLKNSRGNNCFGSYPTHQLNCHIGHGIY---GIGFRD----K 941
               +  + G+  C +    L N +            LN  IG   Y   G   R+     
Sbjct: 984  HSPQSNIFGFIFCLILPQSLPNEKN-----------LNWKIGCECYMEGGENIRNTSMCS 1032

Query: 942  FGQA-GSDHLWLLYLSRQTCYDI 963
            F     SDH++L Y     C+D+
Sbjct: 1033 FATGLVSDHVYLWY-DENFCFDM 1054


>gi|317415954|emb|CAR94519.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 1625

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 310/754 (41%), Positives = 436/754 (57%), Gaps = 70/754 (9%)

Query: 7   KLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLV 66
           K+   MDS   +VR+IGICG+ G+GK+T+A+ +   I  +F+A  F+  V +IS K GL 
Sbjct: 212 KMSLCMDS--EEVRVIGICGIPGIGKSTVAKALSQRIRSQFDAISFISKVGQISKKKGLF 269

Query: 67  SLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGN---- 122
            +++QL   LL   D  +    D  D++  RL+ K+VL+++D+V +++Q++++AGN    
Sbjct: 270 HIKKQLCDHLL---DKKV-TTKDVDDVICKRLRDKRVLIILDNVDELEQIKAVAGNDSAG 325

Query: 123 -REWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQ 181
               FG GSRII+T+ DE LL  +   E+YK   L  D+AL LF  KA KT  P     +
Sbjct: 326 LSNRFGKGSRIIVTTTDERLLIYYNHREIYKIEKLTPDQALLLFCRKALKTDHPTDAFKK 385

Query: 182 LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPS---EILDILQISFDGL 238
           LS   + Y  G PLALEV G  L  R  D W + L+ L+    S   +I+ +L+ SFDGL
Sbjct: 386 LSNEFVDYIDGHPLALEVFGRSLRDRKEDYWSTKLKSLKDNNYSGEEKIIGVLKASFDGL 445

Query: 239 QELEKK-IFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDL 297
           +  E+K +FLD ACFFKG D   +    E CG+HP I I +L EK LI++    LWMHDL
Sbjct: 446 ENQEQKDMFLDTACFFKGKDVCRLGKIFESCGYHPGINIDILCEKYLISMVGGKLWMHDL 505

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           LQ++G+ IV+ +S +E G+RSRLW       VL ++ GT+ VEGI L +    ++V+L  
Sbjct: 506 LQKMGRDIVRGESKKE-GERSRLWHHTVALPVLKKNKGTKTVEGIFLSS-SQPDKVHL-- 561

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM- 416
               FS M NLRLLKI N++    LEYLS+ L LL W   PLK LPS+ + DK +E+ + 
Sbjct: 562 KKDPFSNMDNLRLLKIYNVEFSGCLEYLSDELSLLEWHKCPLKSLPSSFEPDKLVELNLS 621

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
                    +  + L+KL V+ LS  + LI+ PDF   PNLE+LIL+G            
Sbjct: 622 ESEIEELWEEIERPLEKLAVLNLSDCQKLIKTPDFDKVPNLEQLILQG------------ 669

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
                       CTSL  +P  I        NL+SL   I          +SG  K ++ 
Sbjct: 670 ------------CTSLSAVPDNI--------NLRSLTNFI----------LSGCSKLKKL 699

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP-VTVSNLKCLRS 595
           PEI E M+ L +LH++GTAI  LP SI  L+GL LLNL++C+SL  LP V  ++L  L+ 
Sbjct: 700 PEIGEDMKQLRKLHVDGTAIEELPTSINHLNGLTLLNLRDCKSLLSLPDVICTSLTSLQI 759

Query: 596 LKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           L +SGCS L + PE + S++ L EL+   T I+ +P+S + LT L LLNL +CKNL+ LP
Sbjct: 760 LNVSGCSNLNELPENLGSLECLQELYASRTPIQVLPTSSKHLTDLTLLNLRECKNLLTLP 819

Query: 656 SSIIA-LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA---VPHSTSWYSYIPIN 711
             I   L SL+ LNLSGC  L  +PE LG +ESL+EL  SGTA   VP S S  S +   
Sbjct: 820 DVICTNLTSLQILNLSGCSNLNELPENLGSLESLQELYASGTAISQVPESISQLSQLEEL 879

Query: 712 LMRKSVALK-LPSLSGLCSLRKLNLTDCNLMEGA 744
           +      L+ LP L    S+R +++ +C L++GA
Sbjct: 880 VFDGCSKLQSLPRLP--FSIRAVSVHNCPLLQGA 911



 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 154/442 (34%), Positives = 233/442 (52%), Gaps = 23/442 (5%)

Query: 481  LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
            L I N++    L  L  ++ +    K  LKSLP++    K L  L++S       + EI 
Sbjct: 575  LKIYNVEFSGCLEYLSDELSLLEWHKCPLKSLPSSFEPDK-LVELNLSESEIEELWEEIE 633

Query: 541  EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
              +E L+ L+L            + +  L  L L+ C SL  +P  + NL+ L +  LSG
Sbjct: 634  RPLEKLAVLNLSDCQKLIKTPDFDKVPNLEQLILQGCTSLSAVPDNI-NLRSLTNFILSG 692

Query: 601  CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSI-I 659
            CSKLKK PEI   MK L +L +DGT+I+E+P+SI  L  L LLNL DCK+L+ LP  I  
Sbjct: 693  CSKLKKLPEIGEDMKQLRKLHVDGTAIEELPTSINHLNGLTLLNLRDCKSLLSLPDVICT 752

Query: 660  ALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYIPI-NLMRK 715
            +L SL+ LN+SGC  L  +PE LG +E L+EL  S T +   P S+   + + + NL   
Sbjct: 753  SLTSLQILNVSGCSNLNELPENLGSLECLQELYASRTPIQVLPTSSKHLTDLTLLNLREC 812

Query: 716  SVALKLPSL--SGLCSLRKLNLTDC-NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSI 772
               L LP +  + L SL+ LNL+ C NL E  LP ++G+L SL+ELY S  +   +P SI
Sbjct: 813  KNLLTLPDVICTNLTSLQILNLSGCSNLNE--LPENLGSLESLQELYASGTAISQVPESI 870

Query: 773  THLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLC--KSDSTMIACL 830
            + LS+L  +  + C +LQSLP+LP +IR V V+ C  L+   D+ K+    S +   + L
Sbjct: 871  SQLSQLEELVFDGCSKLQSLPRLPFSIRAVSVHNCP-LLQGADSNKITVWPSAAAGFSFL 929

Query: 831  DSLK--------LLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSI 882
            +  +         L +K L +   + + E      +        +EIP W   ++  S+I
Sbjct: 930  NRQRHDDIAQAFWLPDKHLLWPFYQTFFEGAIRRDERFEYGYRSNEIPAWLSRRSTESTI 989

Query: 883  TVTRPSNLYNKKKLVGYAICCV 904
            T+  P ++  K K +  A+C +
Sbjct: 990  TIPLPHDVDGKTKWIKLALCFI 1011


>gi|255558310|ref|XP_002520182.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223540674|gb|EEF42237.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1349

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 344/1063 (32%), Positives = 521/1063 (49%), Gaps = 194/1063 (18%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +DSR ++L  ++D   + V+++GI GMGG GK+T+A+ +++ +   FE   F+ N+RE S
Sbjct: 192  LDSRLQELMNMLDIKGNGVKVMGIYGMGGAGKSTLAKALFNKLVMHFERRSFISNIRETS 251

Query: 61   S-KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKK-VLLVIDDVVDVKQLQS 118
            + K GL +LQ++L+  L   + +S  NV      L   LQ +K VL+V+DD+ D  QL  
Sbjct: 252  NQKDGLDALQKRLIRDL---SPDSAANV-----SLREVLQTQKPVLIVLDDIDDTIQLHL 303

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            LAG R W   GSRIIIT+RD   ++   VD VY+  GL++ EA+QLF+  AF   +PL E
Sbjct: 304  LAGKRRWIYEGSRIIITTRDIQTIRAGIVDVVYEMRGLDFPEAVQLFSYHAFGREKPLPE 363

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFL-SGRSVDEWRSTLERLEIEP--PSEILDILQISF 235
               +S +I+   G LPLALEV GS L   R+ + W    E+LE  P  P  + ++L+ISF
Sbjct: 364  FADISQKIVSRTGNLPLALEVFGSSLFDKRTKNLWVEAFEKLEQNPPGPGRLQEVLEISF 423

Query: 236  DGLQELEKKIFLDIACFF--KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLIT-VHNNTL 292
            +GL + +K  FLDIACFF  +  +++ +   L+G GF     IR L  K LI  + N+ L
Sbjct: 424  NGLDDQQKCAFLDIACFFIKQTMEKEEIVYVLKGYGFAAETLIRDLAAKSLIKIIENDFL 483

Query: 293  WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD------- 345
            W+HD L+++G++IVQR+SP+  G RSRLW   ++  VL    GT  ++GI LD       
Sbjct: 484  WIHDQLRDMGRRIVQRESPDP-GNRSRLWDFNDILSVLKNEKGTRNIQGIALDIETNRYE 542

Query: 346  -----------------------------NYHHENEVYLCASAKAFSKMTNLRLLKICNL 376
                                         N  H     +    ++F +M NLR L+I ++
Sbjct: 543  ASTGDIYWMNFRRRPTFNSAIMYLKEIYKNRFHNGAANIILKTESFKQMVNLRYLQINDV 602

Query: 377  QLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKV 436
             L    + +   ++ L WRG  L+ LPS   M     + + +S+I +LWK     ++L +
Sbjct: 603  VLNGNFKQMPAEVKFLQWRGCSLENLPSEFCMQHLAVLDLSHSKIRKLWKQSWCTERLLL 662

Query: 437  MILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLP 496
            + L +  +L  +PD +    LEKLILE C  L +IH S+    KLI LN+K C+      
Sbjct: 663  LNLQNCYHLTALPDLSVHSALEKLILENCKALVQIHKSVGDLKKLIHLNLKGCS------ 716

Query: 497  GKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAI 556
                       NL   P+ +SGLK L  LD++G  K ++ P+ +  M++L EL L+ TAI
Sbjct: 717  -----------NLTEFPSDVSGLKLLEILDLTGCPKIKQLPDDMRSMKNLRELLLDETAI 765

Query: 557  RGLPLSI----EL-------------------------------------------LSGL 569
              LP SI    EL                                           LS L
Sbjct: 766  VKLPDSIFHLKELRKLSLKGCWLLRHVSVHIGKLTSLQELSLDSSGLEEIPDSIGSLSNL 825

Query: 570  VLLNLKNCRSLEILPVTVSNLKC-----------------------LRSLKLSGCSKLKK 606
             +LNL  C+SL  +P ++SNL+                        L+SL +S C  L K
Sbjct: 826  EILNLARCKSLIAIPDSISNLESLIDLRLGSSSIEELPASIGSLCHLKSLSVSHCQSLSK 885

Query: 607  FPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL--------------- 651
             P+ +  +  L EL+L+GTS+ E+P  +  L+ L  L++ +C +L               
Sbjct: 886  LPDSIGGLASLVELWLEGTSVTEIPDQVGTLSMLRKLHIGNCMDLRFLPESIGKMLNLTT 945

Query: 652  --------VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PH 700
                      LP SI  L+SL TL L+ C +L+ +P ++G ++ L+ L +  T+V   P 
Sbjct: 946  LILDYSMISELPESIEMLESLSTLMLNKCKQLQRLPASIGNLKRLQHLYMEETSVSELPD 1005

Query: 701  STSWYSYIPINLMRK-------SVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNL 752
                 S + I  MRK         A  LP SLS L  L  L+        GA+P +   L
Sbjct: 1006 EMGMLSNLMIWKMRKPHTRQLQDTASVLPKSLSNLSLLEHLDACGWAFF-GAVPDEFDKL 1064

Query: 753  CSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVT 812
             SL+ L  S NS   LP+ +  LS L N+ L DCK+L+SLP LP ++  + V  C +L +
Sbjct: 1065 SSLQTLNFSHNSICCLPSRLRGLSILKNLILADCKQLKSLPLLPSSLVNLIVANCNALES 1124

Query: 813  LLD--------ALKLCKSDSTM----IACLDSLKLLGNKS--LAFSMLREYLEAVSNTRQ 858
            + D         L L   +  M    + CL SL+ L        F  +++ L  V+  ++
Sbjct: 1125 VCDLANLQSLQDLDLTNCNKIMDIPGLECLKSLRRLYMTGCFACFPAVKKRLAKVA-LKR 1183

Query: 859  HLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAI 901
             L++ +PG  +P WF+ +    S     P NL  K  +VG  +
Sbjct: 1184 LLNLSMPGRVLPNWFVQEIPRFST----PKNLDIKGIIVGIVV 1222


>gi|38489219|gb|AAR21295.1| bacterial spot disease resistance protein 4 [Solanum lycopersicum]
          Length = 1146

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 314/946 (33%), Positives = 478/946 (50%), Gaps = 155/946 (16%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +++  EKL+  +    +DVR++GI G+GG+GKT IA+ ++D +S++FEAS FL +V+E +
Sbjct: 204  INAHLEKLKSKLQIEINDVRILGIWGIGGVGKTRIAKAIFDTLSYQFEASCFLADVKEFA 263

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
             K  L SLQ  LLS+LL+  ++ ++N +DG  M+ +RL   KVL+V+DD+    Q++ LA
Sbjct: 264  KKNKLHSLQNILLSELLRKKNDYVYNKYDGKCMIPNRLCSLKVLIVLDDIDHGDQMEYLA 323

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            G+  WFG+GSR+I+T+R++HL++    D +Y+   L   EA+QLFNM AFK   P ++  
Sbjct: 324  GDICWFGNGSRVIVTTRNKHLIEKD--DAIYEVSTLPDHEAMQLFNMHAFKKEVPNEDFK 381

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            +L+  I+ +A GLPLAL+V G  L  +++  W+ T+E+++ +  SEI++ L+IS+DGL+ 
Sbjct: 382  ELALEIVNHAKGLPLALKVWGCLLHKKNLSLWKITVEQIKKDSNSEIVEQLKISYDGLES 441

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQ 299
             E++IFLDIACFF+G  R  V   L+ C F    G+ VLI K L+ +  N+ + MHDL++
Sbjct: 442  EEQEIFLDIACFFRGEKRKEVMQILKSCDFGAEYGLDVLINKSLVFISENDRIEMHDLIR 501

Query: 300  ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
            ++G+ +V+ Q  ++  KRSR+W  E+   V+ + TGT  VE I    +    EV    + 
Sbjct: 502  DMGRYVVKMQKLQK--KRSRIWDVEDFKEVMIDYTGTMTVEAIWFSCFE---EVRF--NK 554

Query: 360  KAFSKMTNLRLLKICN----------------------------LQLPNGLEYLSNRLRL 391
            +A  KM  LR+L I +                                + +EYLSN LR 
Sbjct: 555  EAMKKMKRLRILHIFDGFVKFFSSPPSSNSNDSEEEDDSYDLVVDHHDDSIEYLSNNLRW 614

Query: 392  LGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDF 451
            L W  Y  K LP N + +K + + + +S +  LWK  +HL  L+ + LS S++L++ PDF
Sbjct: 615  LVWNHYSWKSLPENFKPEKLVHLELRWSSLHYLWKKTEHLPSLRKLDLSLSKSLVQTPDF 674

Query: 452  TGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKS 511
            TG PNLE L LE C++L E+H SL    KLI LN+  CT L   P  I M+SLE L+L+ 
Sbjct: 675  TGMPNLEYLNLEYCSKLEEVHYSLAYCEKLIELNLSWCTKLRRFP-YINMESLESLDLQY 733

Query: 512  LPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVL 571
                     C   +          FPEI+  M+    +    T I  LP S++  + L  
Sbjct: 734  ---------CYGIM---------VFPEIIGTMKPELMILSANTMITELPSSLQYPTHLTE 775

Query: 572  LNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP 631
            L+L    +LE LP ++  LK L  L +S C  LK  PE +  +++L EL    T I + P
Sbjct: 776  LDLSGMENLEALPSSIVKLKDLVKLNVSYCLTLKSLPEEIGDLENLEELDASRTLISQPP 835

Query: 632  SSIELLTKLELLNLSDCKNLVR-----LPSSIIALKSLKTLNL-SGCFKLENVPETLGQI 685
            SSI  L KL+ L L     L        P     L SL+ L L S  F+   +PE +G +
Sbjct: 836  SSIVRLNKLKSLKLMKRNTLTDDVCFVFPPVNNGLLSLEILELGSSNFEDGRIPEDIGCL 895

Query: 686  ESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGAL 745
             SL+EL + G    H                                            L
Sbjct: 896  SSLKELRLEGDNFNH--------------------------------------------L 911

Query: 746  PSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVN 805
            P  I  L +L+ LY                       ++DC+ L SLP+ PP +  +  +
Sbjct: 912  PQSIAQLGALRFLY-----------------------IKDCRSLTSLPEFPPQLDTIFAD 948

Query: 806  GCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVP 865
                L+     L +  S    I+  DSL L    SL                        
Sbjct: 949  WSNDLICKSLFLNI-SSFQHNISASDSLSLRVFTSL------------------------ 983

Query: 866  GSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS 911
            GS IP WF +Q   +S++V  P N Y     +G+A+C   ++ +N+
Sbjct: 984  GSSIPIWFHHQGTDTSVSVNLPENWYVSDNFLGFAVCYYGNLTENT 1029


>gi|255555349|ref|XP_002518711.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223542092|gb|EEF43636.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1109

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 296/725 (40%), Positives = 411/725 (56%), Gaps = 73/725 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           + +R +++  L+    SDVR++GI GMGG+GKTT+AR +YD ISH+FE+S FL N+RE  
Sbjct: 202 IQTRIKQIECLLCLKLSDVRIVGIWGMGGIGKTTLARAIYDKISHQFESSCFLSNIREQL 261

Query: 61  SKGGLVSLQRQLLSQLLK--LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            +  L  L+ +L S LL+  +   S  N+   +  +  RL RKKVL+VIDD   + QLQ 
Sbjct: 262 ERCTLPQLRDELFSSLLEKEILTPSTLNL--RLSFIKDRLCRKKVLVVIDDADSLTQLQE 319

Query: 119 LAGNRE--WFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
           L    E  +FGSGSRIIITSRD+ +L+    D++Y    L   EALQLF++ AFK   P 
Sbjct: 320 LLLESEPDYFGSGSRIIITSRDKQVLRNIARDKIYTMQKLKNHEALQLFSLNAFKQDYPT 379

Query: 177 QE-CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
            + C+  S R+I+YA G PLA+ VLGS L  RS ++W S LERL   P  EI ++L+ S+
Sbjct: 380 SDRCILQSERVIKYAKGNPLAIRVLGSALFNRSEEDWESALERLGKIPNKEIDNVLRTSY 439

Query: 236 DGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMH 295
           DGL   E+ IFLDI CFF+G  R  VT  L+GC     I I  LI++ LITV    L +H
Sbjct: 440 DGLDSDEQNIFLDIVCFFRGEHRGLVTKILDGCYPSAHIVITTLIDRSLITVSYGYLKLH 499

Query: 296 DLLQELGQQIVQRQS--PEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
           DLLQE+G+ IV  +S  PE     SRLW  E+VC+VL E+ GTE++EGI LD     +E+
Sbjct: 500 DLLQEMGRNIVLNESKIPE---SHSRLWIPEDVCYVLKENKGTEVIEGISLDISKARSEL 556

Query: 354 YLCASAKAFSKMTNLRLLKIC----------NLQLP-NGLEYLSNRLRLLGWRGYPLKFL 402
            L   +  F++M+ LR L +            LQL  +GL+ L   LR L W  +PLK L
Sbjct: 557 RL--RSNTFARMSRLRFLNLYRSPHDRDKKDKLQLSLDGLQTLPTELRHLHWSEFPLKSL 614

Query: 403 PSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
           PSN   +  + + +  S++ +LW GI++L KLK + LS SE L R+PD + A N+EK+ L
Sbjct: 615 PSNFTPENLVVLSLPDSKLKKLWTGIQNLVKLKEIDLSGSEYLYRIPDLSKATNIEKIDL 674

Query: 463 EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCL 522
            GC  L E+H S+   NKL  L++ +C +L  LPG+I  + L+   +   P         
Sbjct: 675 WGCESLEEVHSSIQYLNKLEFLDIGECYNLRRLPGRIDSEVLKVFKVNDCP--------- 725

Query: 523 STLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIE---LLSGLVLLNLKNCRS 579
                    + +  P+   ++E   EL L+ TAI  +  +I    + S LV L + NC  
Sbjct: 726 ---------RIKRCPQFQGNLE---ELELDCTAITDVATTISSILISSTLVQLAVYNCGK 773

Query: 580 LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM------------------------K 615
           L  LP +   LK L SL L   S+L+ FPEI+  M                        K
Sbjct: 774 LSSLPSSFYKLKSLESLDLDNWSELESFPEILEPMINLEFITLRNCRRLKRLPNSICNLK 833

Query: 616 DLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
            L+ L ++G +IKE+PSSIE L  L  L L+DCK+L  LP SI  L  L+TL L  C  L
Sbjct: 834 SLAYLDVEGAAIKEIPSSIEHLILLTTLKLNDCKDLESLPCSIHKLPQLQTLELYSCKSL 893

Query: 676 ENVPE 680
            ++PE
Sbjct: 894 RSLPE 898



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 220/482 (45%), Gaps = 76/482 (15%)

Query: 444 NLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKS 503
           NL R P      +  +L L+G   L    P+ L H       +K   S  T P  +++ S
Sbjct: 573 NLYRSPHDRDKKDKLQLSLDGLQTL----PTELRHLHWSEFPLKSLPSNFT-PENLVVLS 627

Query: 504 LEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLS 562
           L    LK L T I  L  L  +D+SG       P++     ++ ++ L G  ++  +  S
Sbjct: 628 LPDSKLKKLWTGIQNLVKLKEIDLSGSEYLYRIPDL-SKATNIEKIDLWGCESLEEVHSS 686

Query: 563 IELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL 622
           I+ L+ L  L++  C +L  LP  + + + L+  K++ C ++K+ P+      +L EL L
Sbjct: 687 IQYLNKLEFLDIGECYNLRRLPGRIDS-EVLKVFKVNDCPRIKRCPQF---QGNLEELEL 742

Query: 623 DGTSIKEVP---SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVP 679
           D T+I +V    SSI + + L  L + +C  L  LPSS   LKSL++L+L    +LE+ P
Sbjct: 743 DCTAITDVATTISSILISSTLVQLAVYNCGKLSSLPSSFYKLKSLESLDLDNWSELESFP 802

Query: 680 ETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCN 739
           E L  + +LE                                           + L +C 
Sbjct: 803 EILEPMINLE------------------------------------------FITLRNCR 820

Query: 740 LMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP---QLP 796
            ++  LP+ I NL SL  L +   +   +P+SI HL  L  ++L DCK L+SLP      
Sbjct: 821 RLK-RLPNSICNLKSLAYLDVEGAAIKEIPSSIEHLILLTTLKLNDCKDLESLPCSIHKL 879

Query: 797 PNIRQVRVNGCASLVTLLD-ALKLCKSDSTMIACLDSLKLLGNKS-----LAFS-MLREY 849
           P ++ + +  C SL +L +  L L +  +     L+++ +  NK      L F+  LR  
Sbjct: 880 PQLQTLELYSCKSLRSLPEFPLSLLRLLAMNCESLETISISFNKHCNLRILTFANCLRLD 939

Query: 850 LEAVSNTRQHLS------VVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICC 903
            +A+    +  S      ++ PGSEIP WF +Q+ GSS+T+  P NL   K+    A C 
Sbjct: 940 PKALGTVARAASSHTDFFLLYPGSEIPRWFSHQSMGSSVTLQFPVNL---KQFKAIAFCV 996

Query: 904 VF 905
           VF
Sbjct: 997 VF 998


>gi|357458903|ref|XP_003599732.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|357474669|ref|XP_003607619.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355488780|gb|AES69983.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355508674|gb|AES89816.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1058

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 255/640 (39%), Positives = 383/640 (59%), Gaps = 26/640 (4%)

Query: 18  DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLL 77
           DVR++GICGMGG+GKTT+A ++Y+ ISH+F     +D++ +I    GL+  Q+ +L Q L
Sbjct: 211 DVRVVGICGMGGVGKTTLATILYNKISHQFPVFCLIDDLSKIYRDDGLIGAQKLILHQTL 270

Query: 78  KLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSR 137
                   N+++  +++ SRL   K L+++D+V  V+QL+ LA NREW G+GSRIII SR
Sbjct: 271 VEEQLQTCNIYNASNLIQSRLHCVKALIILDNVDQVEQLEKLAVNREWLGAGSRIIIISR 330

Query: 138 DEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLAL 197
           DEH+LK +GVD VYK   LN  ++LQLF+ KAFK    +    +L++ I+RYA GLPLA+
Sbjct: 331 DEHILKEYGVDVVYKVPLLNRTDSLQLFSRKAFKLDHIMSSYDKLASEILRYANGLPLAI 390

Query: 198 EVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGND 257
           +VLGSFL  R++ EW+S L RL   P  +I+D+L++SFDGL+E+EK+IFL IACFFKG +
Sbjct: 391 KVLGSFLYDRNIFEWKSALARLRESPNKDIMDVLRLSFDGLEEMEKEIFLHIACFFKGGE 450

Query: 258 RDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQELGQQIVQRQSPEELGK 316
             YV N L  CGFH  IG+RVLI+K +I++   N + +H LLQELG++IVQ +S +E  K
Sbjct: 451 EKYVKNVLNCCGFHADIGLRVLIDKSVISISTENNIEIHRLLQELGRKIVQEKSIKESRK 510

Query: 317 RSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNL 376
            SR+W  ++  +V++E+   + V  IV      E ++++   A+  SKM +LRLL +  +
Sbjct: 511 WSRMWLHKQFYNVMSENMEKK-VGAIVFVRDKKERKIFIM--AETLSKMIHLRLLILKGV 567

Query: 377 QLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKV 436
            L   L  LS+ LR + W  YP K+LPS+   ++ +E+ + YS + +LWK  K+L  L+ 
Sbjct: 568 TLTGNLNGLSDELRYVEWNRYPFKYLPSSFLPNQLVELILRYSSVKQLWKDKKYLPNLRT 627

Query: 437 MILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLP 496
           + LSHS++L +MP+F   PNLE++  EGC +L ++ PS+ +  KL+ LN+KDC  LI +P
Sbjct: 628 LDLSHSKSLRKMPNFGEVPNLERVSFEGCVKLVQMGPSIGVLRKLVYLNLKDCKKLIIIP 687

Query: 497 GKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK-FREFPEIVEHMEHLSELHLEGTA 555
             I                  GL  L  L++SG  K F+   ++ +H    S  H + T 
Sbjct: 688 KNIF-----------------GLSSLECLNLSGCSKVFKNPRQLRKHDSSESSSHFQSTT 730

Query: 556 IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMK 615
              L  +      L     K+  S  +  +   +      +   G S+L   P  +  ++
Sbjct: 731 SSILKWTRIHFHSLYPYAHKDIASRFLHSLLSLSCLNDLDISFCGISQL---PNAIGRLR 787

Query: 616 DLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
            L  L L G +   VP S+  L++L  LNL  CK L  LP
Sbjct: 788 WLERLNLGGNNFVTVP-SLRKLSRLAYLNLQHCKLLKSLP 826



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 200/436 (45%), Gaps = 50/436 (11%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
            LR+L LS    L+K P     + +L  +  +G   + ++  SI +L KL  LNL DCK L
Sbjct: 625  LRTLDLSHSKSLRKMPNF-GEVPNLERVSFEGCVKLVQMGPSIGVLRKLVYLNLKDCKKL 683

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQ---------IESLEELDISGTAVPHST 702
            + +P +I  L SL+ LNLSGC K+   P  L +          +S     +  T + H  
Sbjct: 684  IIIPKNIFGLSSLECLNLSGCSKVFKNPRQLRKHDSSESSSHFQSTTSSILKWTRI-HFH 742

Query: 703  SWYSYIPINLMRKSVA-LKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLS 761
            S Y Y       K +A   L SL  L  L  L+++ C + +  LP+ IG L  L+ L L 
Sbjct: 743  SLYPY-----AHKDIASRFLHSLLSLSCLNDLDISFCGISQ--LPNAIGRLRWLERLNLG 795

Query: 762  KNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI---RQVRVNGCASLVTLLDALK 818
             N+FV++P S+  LS+L  + L+ CK L+SLPQLP        + +N        LD  K
Sbjct: 796  GNNFVTVP-SLRKLSRLAYLNLQHCKLLKSLPQLPFATAIEHDLHINN-------LDKNK 847

Query: 819  LCKSDSTMIACLDSLKLLGNK----SLAFSMLREYLEAVSNTRQH-LSVVVPGSEIPEWF 873
              KS   +I    +   LG +    S+ FS + + + A   +    + +V PGSEIP WF
Sbjct: 848  SWKSKGLVIF---NCPKLGERECWNSMIFSWMIQLIRANPQSSSDVIQIVTPGSEIPSWF 904

Query: 874  MYQNEGSSITVTRPSNLYN--KKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNC---- 927
              Q+   S+++     +++      +G A C VF V   S     +   P   +N     
Sbjct: 905  NNQSNSRSLSIALSPVMHDDTDNNFIGIACCAVFSV---SPTTTTYAKTPAIGINFSNRN 961

Query: 928  --HIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEP 985
                 +GI  +       +  SDH+ L+Y   ++ ++I   ++  LE  ++  +  S   
Sbjct: 962  TRRRWYGIISVSLERYLIEVKSDHMCLIYFPLESFFNILKFIDETLENLDNFRMKFSIMN 1021

Query: 986  WLGQGLEVKMCGLHPV 1001
              G   +V+ CG H V
Sbjct: 1022 PKGLHTKVQSCGYHWV 1037


>gi|357469163|ref|XP_003604866.1| NBS resistance protein-like protein [Medicago truncatula]
 gi|355505921|gb|AES87063.1| NBS resistance protein-like protein [Medicago truncatula]
          Length = 1791

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/562 (43%), Positives = 352/562 (62%), Gaps = 23/562 (4%)

Query: 16   SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI-SSKGGLVSLQRQLLS 74
            S DV ++GI GMGG GKTTIA+ +Y+ I ++FE   FL N+RE   +   LVSLQ+QLL 
Sbjct: 721  SEDVSLLGIWGMGGTGKTTIAKAIYNQIGNKFEGRSFLLNIREFWETNINLVSLQQQLLC 780

Query: 75   QLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIII 134
             + K     I ++  G + L  RL + +VL+V+DDV ++ QL++L G+REWFG GSRIII
Sbjct: 781  DVYKTTTFKIRDIESGKNTLKERLSQNRVLIVLDDVNELDQLKALCGSREWFGPGSRIII 840

Query: 135  TSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLP 194
            T+RD HLL++  VDEVY    +   E+L+LF+  AF    P ++    S  +I Y+G LP
Sbjct: 841  TTRDMHLLRSCRVDEVYTIEEMGDSESLELFSWHAFNQPSPTKDFATHSTDVIAYSGRLP 900

Query: 195  LALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQEL-EKKIFLDIACFF 253
            LAL+VLGS+LS   + EW+  LE+L+  P  ++   L++SFDGL+++ EK+IFLDIACFF
Sbjct: 901  LALQVLGSYLSDCEISEWQKMLEKLKCIPHDQVQKKLKVSFDGLKDVTEKQIFLDIACFF 960

Query: 254  KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQELGQQIVQRQSPE 312
             G DR+     L G GF   IGI+VL+E+ L+TV N N L MHDLL+++G+QIV  +SP 
Sbjct: 961  IGMDRNDAIQILNGSGFFADIGIKVLVERSLVTVDNRNKLRMHDLLRDMGRQIVYEESPF 1020

Query: 313  ELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLK 372
            +   RSRLW+ EEV  ++++  GTE V+G+ L+ +  +N V L  + KAF KM  LRLL+
Sbjct: 1021 DPETRSRLWRREEVFDIISKHKGTEAVKGLALE-FPRKNTVSL--NTKAFKKMNKLRLLQ 1077

Query: 373  ICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLD 432
            +  +QL    +YLS  LR L W G+P  + P+  Q    + I + YS + ++WK  + L+
Sbjct: 1078 LSGVQLNGDFKYLSGELRWLYWHGFPSTYTPAEFQQGSLVSIELKYSSLKQIWKKSQLLE 1137

Query: 433  KLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSL 492
             LK++ LSHS +LI  PDF+  PNLEKL+L+ C RL  +  S+   +KL+++N+ DCTS 
Sbjct: 1138 NLKILNLSHSWDLIETPDFSFMPNLEKLVLKDCPRLTAVSRSIGSLHKLLLINLTDCTS- 1196

Query: 493  ITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLE 552
                            L+ LP +I  LK L TL +SG  K  +  E +E ME L  L  +
Sbjct: 1197 ----------------LQKLPRSIYKLKSLETLILSGCSKIDKLEEDLEQMESLKTLIAD 1240

Query: 553  GTAIRGLPLSIELLSGLVLLNL 574
             TAI  +P SI  L  +  ++L
Sbjct: 1241 KTAITKVPFSIVRLRNIGYISL 1262



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/305 (43%), Positives = 186/305 (60%), Gaps = 11/305 (3%)

Query: 21  MIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK-GGLVS------LQRQLL 73
           +IGI GM G+GK+TIA  +Y+ I   FE    LD+VRE+  + GGLVS      LQ +LL
Sbjct: 221 LIGIWGMAGIGKSTIAEAIYNQIGPYFEHKYLLDDVREVWKRDGGLVSFDGPVSLQEKLL 280

Query: 74  SQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRII 133
           S      +  I  +  G ++L  +L  K+VLLV+D+V  ++QL+SL GNR+WFG GS+II
Sbjct: 281 SYRGIPTEIKIGTIESGKNILKEKLHNKRVLLVLDNVDKLEQLKSLCGNRDWFGPGSKII 340

Query: 134 ITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV-QLSARIIRYAGG 192
           IT+RD HLLK H VD +YK   L+  E+++LFN  AF      +E   +LS +++ Y+ G
Sbjct: 341 ITTRDRHLLKEHRVDHIYKVKELDESESIELFNWAAFNQATTSREGFGELSRQLVAYSRG 400

Query: 193 LPLALEVLGSFLSGRSVDEWRSTLERLEI--EPPSEILDILQISFDGLQELEKKIFLDIA 250
           LPLAL+ LG FL G+ V EW+  L  LE    P  EIL +L+ SF  L   EK IFLDIA
Sbjct: 401 LPLALKALGGFLHGKEVLEWKRVLRSLETFSFPDQEILQVLETSFADLSGEEKHIFLDIA 460

Query: 251 CFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELGQQIVQRQ 309
           CFF   D++ V + L        + I +L +K L+T+  NN L MH LLQ + + I+++ 
Sbjct: 461 CFFNRMDQNDVLHTLNRSTQCSALLISLLEDKSLVTIDENNKLEMHGLLQAMARDIIKKT 520

Query: 310 SPEEL 314
              +L
Sbjct: 521 DQPKL 525



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 102/202 (50%), Gaps = 17/202 (8%)

Query: 590  LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDC 648
            L+ L+ L LS    L + P+    M +L +L L D   +  V  SI  L KL L+NL+DC
Sbjct: 1136 LENLKILNLSHSWDLIETPDF-SFMPNLEKLVLKDCPRLTAVSRSIGSLHKLLLINLTDC 1194

Query: 649  KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI 708
             +L +LP SI  LKSL+TL LSGC K++ + E L Q+ESL+ L    TA+       + +
Sbjct: 1195 TSLQKLPRSIYKLKSLETLILSGCSKIDKLEEDLEQMESLKTLIADKTAI-------TKV 1247

Query: 709  PINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSL 768
            P +++R    L+      LC     +      +  +  S   N+ SL +   SK+S    
Sbjct: 1248 PFSIVR----LRNIGYISLCGFEGFSRDVFPFLVRSWMSPSTNVTSLVQTSTSKSSL--- 1300

Query: 769  PTSITHLSKLLNIELEDCKRLQ 790
              +  +L KL NI +E   +LQ
Sbjct: 1301 -GTFKNLLKLRNIFVECGSKLQ 1321


>gi|357478613|ref|XP_003609592.1| TIR-NBS-LRR RCT1 resistance protein, partial [Medicago truncatula]
 gi|355510647|gb|AES91789.1| TIR-NBS-LRR RCT1 resistance protein, partial [Medicago truncatula]
          Length = 871

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/562 (43%), Positives = 352/562 (62%), Gaps = 23/562 (4%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI-SSKGGLVSLQRQLLS 74
           S DV ++GI GMGG GKTTIA+ +Y+ I ++FE   FL N+RE   +   LVSLQ+QLL 
Sbjct: 215 SEDVSLLGIWGMGGTGKTTIAKAIYNQIGNKFEGRSFLLNIREFWETNINLVSLQQQLLC 274

Query: 75  QLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIII 134
            + K     I ++  G + L  RL + +VL+V+DDV ++ QL++L G+REWFG GSRIII
Sbjct: 275 DVYKTTTFKIRDIESGKNTLKERLSQNRVLIVLDDVNELDQLKALCGSREWFGPGSRIII 334

Query: 135 TSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLP 194
           T+RD HLL++  VDEVY    +   E+L+LF+  AF    P ++    S  +I Y+G LP
Sbjct: 335 TTRDMHLLRSCRVDEVYTIEEMGDSESLELFSWHAFNQPSPTKDFATHSTDVIAYSGRLP 394

Query: 195 LALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQEL-EKKIFLDIACFF 253
           LAL+VLGS+LS   + EW+  LE+L+  P  ++   L++SFDGL+++ EK+IFLDIACFF
Sbjct: 395 LALQVLGSYLSDCEISEWQKMLEKLKCIPHDQVQKKLKVSFDGLKDVTEKQIFLDIACFF 454

Query: 254 KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQELGQQIVQRQSPE 312
            G DR+     L G GF   IGI+VL+E+ L+TV N N L MHDLL+++G+QIV  +SP 
Sbjct: 455 IGMDRNDAIQILNGSGFFADIGIKVLVERSLVTVDNRNKLRMHDLLRDMGRQIVYEESPF 514

Query: 313 ELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLK 372
           +   RSRLW+ EEV  ++++  GTE V+G+ L+ +  +N V L  + KAF KM  LRLL+
Sbjct: 515 DPETRSRLWRREEVFDIISKHKGTEAVKGLALE-FPRKNTVSL--NTKAFKKMNKLRLLQ 571

Query: 373 ICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLD 432
           +  +QL    +YLS  LR L W G+P  + P+  Q    + I + YS + ++WK  + L+
Sbjct: 572 LSGVQLNGDFKYLSGELRWLYWHGFPSTYTPAEFQQGSLVSIELKYSSLKQIWKKSQLLE 631

Query: 433 KLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSL 492
            LK++ LSHS +LI  PDF+  PNLEKL+L+ C RL  +  S+   +KL+++N+ DCTS 
Sbjct: 632 NLKILNLSHSWDLIETPDFSFMPNLEKLVLKDCPRLTAVSRSIGSLHKLLLINLTDCTS- 690

Query: 493 ITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLE 552
                           L+ LP +I  LK L TL +SG  K  +  E +E ME L  L  +
Sbjct: 691 ----------------LQKLPRSIYKLKSLETLILSGCSKIDKLEEDLEQMESLKTLIAD 734

Query: 553 GTAIRGLPLSIELLSGLVLLNL 574
            TAI  +P SI  L  +  ++L
Sbjct: 735 KTAITKVPFSIVRLRNIGYISL 756



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 102/202 (50%), Gaps = 17/202 (8%)

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDC 648
           L+ L+ L LS    L + P+    M +L +L L D   +  V  SI  L KL L+NL+DC
Sbjct: 630 LENLKILNLSHSWDLIETPDF-SFMPNLEKLVLKDCPRLTAVSRSIGSLHKLLLINLTDC 688

Query: 649 KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI 708
            +L +LP SI  LKSL+TL LSGC K++ + E L Q+ESL+ L    TA+       + +
Sbjct: 689 TSLQKLPRSIYKLKSLETLILSGCSKIDKLEEDLEQMESLKTLIADKTAI-------TKV 741

Query: 709 PINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSL 768
           P +++R    L+      LC     +      +  +  S   N+ SL +   SK+S    
Sbjct: 742 PFSIVR----LRNIGYISLCGFEGFSRDVFPFLVRSWMSPSTNVTSLVQTSTSKSSL--- 794

Query: 769 PTSITHLSKLLNIELEDCKRLQ 790
             +  +L KL NI +E   +LQ
Sbjct: 795 -GTFKNLLKLRNIFVECGSKLQ 815


>gi|255555353|ref|XP_002518713.1| Disease resistance protein RPS2, putative [Ricinus communis]
 gi|223542094|gb|EEF43638.1| Disease resistance protein RPS2, putative [Ricinus communis]
          Length = 1010

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 284/691 (41%), Positives = 398/691 (57%), Gaps = 63/691 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++SR +++ FL    S  VR +GI GMGGL KTT+AR +YD I+ +FE+  FL N RE  
Sbjct: 170 IESRIQEIEFLFRKISLSVRKVGIWGMGGLDKTTLARAIYDRIAPQFESCCFLSNTREQL 229

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            +  L  LQ QL S LL+  + S  N+      +  RL  KKVL++IDD  +  QLQ L 
Sbjct: 230 QRCTLAQLQNQLFSTLLE--EQSTLNLRPS--FIKDRLCCKKVLIIIDDADNTTQLQELL 285

Query: 121 GNRE--WFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            + E  +FGSGSRIIITSRD+ +LK+  VDE+Y+   LN  EALQLFN KAFK   P   
Sbjct: 286 LDTEPDYFGSGSRIIITSRDKQVLKSTCVDEIYEMEELNEHEALQLFNFKAFKQDNPTGH 345

Query: 179 CVQLSA-RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
             +L A R+++YA G PLAL VLGS L G+S  +W S LERL+  P  +I ++L+ S+DG
Sbjct: 346 HRRLQAERVVKYAKGNPLALTVLGSTLFGKSKKDWESALERLKRIPHKDIDEVLRTSYDG 405

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN--TLWMH 295
           L   ++ IFLDIACFF+G +++++T  L+G      I I  LI++ LI + ++   L +H
Sbjct: 406 LDSEQRSIFLDIACFFRGQNQNFITKILDGYYVSAHIVISTLIDRSLIMLSSDGSKLELH 465

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DLLQE+G++IV  +S +  G RSRLW  E+VC+VL E+ GTE +EGI LD     +++ L
Sbjct: 466 DLLQEMGRKIVFEES-KNPGNRSRLWIPEDVCYVLNENKGTEAIEGISLDKSKATSKIRL 524

Query: 356 CASAKAFSKMTNLRLLKICNLQLP---NGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
                 FS+M +LR LK    ++    +GL+   N LR L W  +P+K LP N      +
Sbjct: 525 --RPDTFSRMYHLRFLKFYTEKVKISLDGLQSFPNELRHLDWNDFPMKSLPPNFSPQNLV 582

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
            + +  S++ +LW G ++L KLK + LSHS+ LI +PD + A N+EK+ L GC+ L E+H
Sbjct: 583 VLNLRDSKVKKLWTGTQNLVKLKEIDLSHSKYLIGIPDLSKAINIEKIYLTGCSSLEEVH 642

Query: 473 PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
            SL   NKL  L++ DC  L +LP +I    L+ L L S        +C           
Sbjct: 643 SSLQYLNKLEFLDLGDCNKLRSLPRRIDSNVLKVLKLGSPRVK----RC----------- 687

Query: 533 FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSG---LVLLNLKNCRSLEILPVTVSN 589
            REF         L  L+L   AI+ +   I  +     LV L++ NCR L ILP +   
Sbjct: 688 -REFKG-----NQLETLNLYCPAIKNVASIISSILNSSRLVHLSVYNCRKLSILPSSFYK 741

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK 649
           +K LRSL L+ C+                        IK++PSSIE L++L  LNL+DCK
Sbjct: 742 MKSLRSLDLAYCA------------------------IKQIPSSIEHLSQLIALNLTDCK 777

Query: 650 NLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
            L  LPSSI  L  L T+ L+ C  L ++PE
Sbjct: 778 YLESLPSSIGGLPRLATMYLNSCESLRSLPE 808



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 189/408 (46%), Gaps = 55/408 (13%)

Query: 568 GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TS 626
            LV+LNL++ + ++ L     NL  L+ + LS    L   P++ +++ ++ +++L G +S
Sbjct: 580 NLVVLNLRDSK-VKKLWTGTQNLVKLKEIDLSHSKYLIGIPDLSKAI-NIEKIYLTGCSS 637

Query: 627 IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIE 686
           ++EV SS++ L KLE L+L DC  L  LP  I +   LK L L G  +++   E  G   
Sbjct: 638 LEEVHSSLQYLNKLEFLDLGDCNKLRSLPRRIDS-NVLKVLKL-GSPRVKRCREFKGN-- 693

Query: 687 SLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALP 746
            LE L++   A+                K+VA  + S+     L  L++ +C  +   LP
Sbjct: 694 QLETLNLYCPAI----------------KNVASIISSILNSSRLVHLSVYNCRKL-SILP 736

Query: 747 SDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP---PNIRQVR 803
           S    + SL+ L L+  +   +P+SI HLS+L+ + L DCK L+SLP      P +  + 
Sbjct: 737 SSFYKMKSLRSLDLAYCAIKQIPSSIEHLSQLIALNLTDCKYLESLPSSIGGLPRLATMY 796

Query: 804 VNGCASLVTLLD-ALKLCKSDSTMIACLDSLKLLGNKSLAFSM---LREYLEAV------ 853
           +N C SL +L +  L L    +     L+S  +  N+ L  +    LR   +        
Sbjct: 797 LNSCESLRSLPELPLSLRMLFANNCKSLESESITSNRHLLVTFANCLRLRFDQTALQMTD 856

Query: 854 ----SNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLK 909
               +N       + PGSE+P WF  Q+ GSS+T+  P N+Y    L   A C VF   K
Sbjct: 857 FLVPTNVPGRFYWLYPGSEVPGWFSNQSMGSSVTMQSPLNMY---MLNAIAFCIVFEFKK 913

Query: 910 NSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQ---AGSDHLWLLY 954
                    SY   ++ C   H     G    F     A +DH+ + +
Sbjct: 914 --------PSYCCFKVECAEDHAKATFGSGQIFSPSILAKTDHVLIWF 953


>gi|224122448|ref|XP_002318839.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222859512|gb|EEE97059.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 937

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 294/777 (37%), Positives = 439/777 (56%), Gaps = 88/777 (11%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DS+ + +  ++  G+++VR +GI GM G+GKT IA+ V++ + H+FE S FL N+R+ S
Sbjct: 184 IDSQVKDIIAMLSVGTNEVRTVGIYGMPGIGKTAIAKAVFNQLCHKFEGSCFLLNIRKSS 243

Query: 61  SK-GGLVSLQRQLLSQLLKLADNSIW--NVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
            +  GLV LQ QLL   L      IW  +V  GI+ + S+  RK+VL+++DD    +Q+ 
Sbjct: 244 DQHNGLVQLQEQLLFDSLT---GKIWFADVDAGINGIKSQFCRKRVLVILDDFDQSEQIH 300

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
           +L G R WFG GSRI+IT+RDEHLL    V + Y    LN++E+LQLF+  AF+   P+ 
Sbjct: 301 ALVGERGWFGPGSRIVITTRDEHLLTQLEVVKKYPAKELNHEESLQLFSWHAFREPHPVT 360

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF-D 236
           E V+LS  ++ Y GG+PLALEV+GS+L  RS+ +W S +E+L+  P  +I   L+ SF D
Sbjct: 361 EYVELSKVLVDYVGGVPLALEVVGSYLFRRSIPQWTSAIEKLKKIPHHQIQRQLKTSFDD 420

Query: 237 GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMH 295
              +  K +FLDIACFF G D+DYV   L+G GF+P I I +L E+ L+TV++ N L MH
Sbjct: 421 LDGDKLKDMFLDIACFFIGMDKDYVGKILDGRGFYPEIDINILRERSLLTVNSENKLQMH 480

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY- 354
           +LL+++G++I+++  P   GKRSRLW  E+V  VL + +GTE+VEGI+LD    ++    
Sbjct: 481 NLLRDMGREIIRQMDPNP-GKRSRLWLHEDVMEVLGKCSGTEVVEGIMLDAQASKDAFLS 539

Query: 355 --------------LCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLK 400
                         +  S  +F++MT+L+LL+    QL    E++S  L  L W    ++
Sbjct: 540 TTSFAPTTSQASKDVVVSTTSFARMTSLQLLQFSGGQLRGHCEHVSEALIWLCWHKCSMR 599

Query: 401 FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
            LP   Q+D  + + M +S I ELWK  K L+ LKV+ LSHS   ++ P+F+G P+LE L
Sbjct: 600 TLPHKFQLDSLVVLDMQHSEIRELWKETKCLNNLKVLDLSHSMFFVKTPNFSGLPSLETL 659

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLK 520
           ILE C RL +IH S+    KL+ LN+K C+SL  LP             +SLP+T     
Sbjct: 660 ILENCKRLADIHQSIGELKKLVFLNLKGCSSLKNLP-------------ESLPST----- 701

Query: 521 CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL 580
            L TL+ +G +   +FPE + +M+ L E+    T +  LP SI         NLK  + L
Sbjct: 702 -LETLNTTGCISLEKFPENLGNMQGLIEVQANETEVHHLPSSIG--------NLKKLKKL 752

Query: 581 EI-------LPVTVSNLKCLRSLKLSGCSKLKKFPEI-VRSMKDLSELFLDGTSIKEVPS 632
            I       LP++ S L  L +L +S          I + S+  L +L L      E+P+
Sbjct: 753 FIVLKQQPFLPLSFSGLSSLTTLHVSNRHLSNSNTSINLGSLSSLQDLKLASNDFSELPA 812

Query: 633 SIELLTKLELLNLSDCKNLV---RLPSSIIALKSLKTLNL---SGCFKLENVP------- 679
            I  L KLE L+LS C+NL+    +PSS+  L +L  ++L    G   +EN P       
Sbjct: 813 GIGHLPKLEKLDLSACRNLLFISEIPSSLRTLVALDCISLEKIQGLESVENKPVIRMENC 872

Query: 680 --------ETLGQIES---LEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLS 725
                   E L Q+ S   L ++ + G+ VPH   W  +I     R S   ++P++S
Sbjct: 873 NNLSNNFKEILLQVLSKGKLPDIVLPGSDVPH---W--FIQYQRDRSSSTFRIPAIS 924



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 190/389 (48%), Gaps = 39/389 (10%)

Query: 514 TTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSE----LHLEGTAIRGLPLSIELLSGL 569
           T+ + +  L  L  SG        ++  H EH+SE    L     ++R LP   +L S L
Sbjct: 559 TSFARMTSLQLLQFSGG-------QLRGHCEHVSEALIWLCWHKCSMRTLPHKFQLDS-L 610

Query: 570 VLLNLKNCRSLEILPVTVSNLKCLRSLK---LSGCSKLKKFPEIVRSMKDLSELFLDG-T 625
           V+L++++    E+   T    KCL +LK   LS      K P     +  L  L L+   
Sbjct: 611 VVLDMQHSEIRELWKET----KCLNNLKVLDLSHSMFFVKTPNF-SGLPSLETLILENCK 665

Query: 626 SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI 685
            + ++  SI  L KL  LNL  C +L  LP S+ +  +L+TLN +GC  LE  PE LG +
Sbjct: 666 RLADIHQSIGELKKLVFLNLKGCSSLKNLPESLPS--TLETLNTTGCISLEKFPENLGNM 723

Query: 686 ESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK----LP-SLSGLCSLRKLNLTDCNL 740
           + L E+  + T V H  S    +   L +  + LK    LP S SGL SL  L++++ +L
Sbjct: 724 QGLIEVQANETEVHHLPSSIGNLK-KLKKLFIVLKQQPFLPLSFSGLSSLTTLHVSNRHL 782

Query: 741 MEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIR 800
                  ++G+L SL++L L+ N F  LP  I HL KL  ++L  C+ L  + ++P ++R
Sbjct: 783 SNSNTSINLGSLSSLQDLKLASNDFSELPAGIGHLPKLEKLDLSACRNLLFISEIPSSLR 842

Query: 801 QVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHL 860
            +    C SL  +     L   ++  +  +++   L N        +E L  V +  +  
Sbjct: 843 TLVALDCISLEKIQG---LESVENKPVIRMENCNNLSNN------FKEILLQVLSKGKLP 893

Query: 861 SVVVPGSEIPEWFM-YQNEGSSITVTRPS 888
            +V+PGS++P WF+ YQ + SS T   P+
Sbjct: 894 DIVLPGSDVPHWFIQYQRDRSSSTFRIPA 922


>gi|449482303|ref|XP_004156242.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1633

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 296/723 (40%), Positives = 418/723 (57%), Gaps = 45/723 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M SR   +   +  G  DVR + I GMGG+GKTTIA+VV+D I  +FE   FL  +    
Sbjct: 203 MTSRLLHMNMHLGLGLDDVRFVAIVGMGGIGKTTIAQVVFDCILSKFEDCCFL-TLPGGD 261

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           SK  LVSLQR++LSQ+    D  IW+   G++M+ +RL  +KVL+V+D + + +QL+ LA
Sbjct: 262 SKQSLVSLQREMLSQIFHKEDFRIWHENHGVEMIKNRLSGRKVLIVLDGIEERRQLEMLA 321

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDE--VYKPHGLNYDEALQLFNMKAFKT-YQPLQ 177
           G+ EWFG GSRIIIT+R++ LL     DE  VY    L++D ALQLF   AF + +Q   
Sbjct: 322 GSIEWFGPGSRIIITTRNKGLLCHPNYDEMKVYNVEELDHDSALQLFLKHAFGSNHQNND 381

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
             + LS  I+  A  LPLAL V+GS L G+ +  WR TL+RL         D+L+IS+DG
Sbjct: 382 SFMDLSNEIVEKAKRLPLALRVIGSSLYGKDITVWRETLKRLIKVDERNFFDVLKISYDG 441

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDL 297
           L    +++FLDI CFF G + D V   LE  G+ P   +++L+++CLI V +  + +HDL
Sbjct: 442 LGVESQQVFLDITCFFNGKNEDRVIEILESFGYSPNSEVQLLMQRCLIEVSHKKILVHDL 501

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           + E+G++IV+++S  +  K+SR+W  E++     E      ++GIVL +   E E  +  
Sbjct: 502 ILEMGREIVRKESLTQAEKQSRIWLHEDLYCRFAEKHDLMHIQGIVL-SLAKEMEESIEL 560

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
            A++FS+MT LR+L+I N++L   +EYLS  LR++ W GYP K LP   Q     E+ + 
Sbjct: 561 DAESFSEMTKLRILEISNVELDEDIEYLSPLLRIINWLGYPSKSLPPTFQSRYLFELLLP 620

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
           +S +  +W G K   KLK++ +S+SE+L   PDF+G PNLE+L+L  C RL EIHPS+  
Sbjct: 621 HSHLLRIWDGKKRFPKLKLIDVSNSEHLRVTPDFSGVPNLERLVLCNCVRLCEIHPSINS 680

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
            NKLI+L+++ C  L   P  I  K+L+ L L       +GL+               FP
Sbjct: 681 LNKLILLDLEGCGDLKHFPANIRCKNLQTLKLSG-----TGLEI--------------FP 721

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
           EI  HMEHL+ LHL+G+ I     SI  L+GLV L+L +C  L  LP  + NLK L++L 
Sbjct: 722 EI-GHMEHLTHLHLDGSNITHFHPSIGYLTGLVFLDLSSCLGLSSLPCEIGNLKSLKTLL 780

Query: 598 LSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVR---- 653
           L  C KL K P  + + + L  L +  TSI  VP SI  +  L+ L   DC+ L      
Sbjct: 781 LKYCKKLDKIPPSLANAESLETLSISETSITHVPPSI--IHCLKNLKTLDCEGLSHGIWK 838

Query: 654 --LPSSII------ALKSLKTLNLSGCFKL--ENVPETLGQIESLEELDISG---TAVPH 700
             LP   I       L  LK LNL GC KL  E++PE L    SLE LD+S    T +P 
Sbjct: 839 SLLPQFNINQTITTGLGCLKALNLMGC-KLMDEDIPEDLHCFSSLETLDLSYNNFTTLPD 897

Query: 701 STS 703
           S S
Sbjct: 898 SLS 900



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/272 (37%), Positives = 147/272 (54%), Gaps = 34/272 (12%)

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKC--LRSLKLSGCSKLKKFPEIVRSMKDLSE 619
           SI  L+ L+LL+L+ C  L+  P   +N++C  L++LKLSG + L+ FPEI   M+ L+ 
Sbjct: 677 SINSLNKLILLDLEGCGDLKHFP---ANIRCKNLQTLKLSG-TGLEIFPEIGH-MEHLTH 731

Query: 620 LFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVP 679
           L LDG++I     SI  LT L  L+LS C  L  LP  I  LKSLKTL L  C KL+ +P
Sbjct: 732 LHLDGSNITHFHPSIGYLTGLVFLDLSSCLGLSSLPCEIGNLKSLKTLLLKYCKKLDKIP 791

Query: 680 ETLGQIESLEELDISGTAVPHSTS---------------------WYSYIPINLMRKSVA 718
            +L   ESLE L IS T++ H                        W S +P   + +++ 
Sbjct: 792 PSLANAESLETLSISETSITHVPPSIIHCLKNLKTLDCEGLSHGIWKSLLPQFNINQTIT 851

Query: 719 LKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
                 +GL  L+ LNL  C LM+  +P D+    SL+ L LS N+F +LP S++HL KL
Sbjct: 852 ------TGLGCLKALNLMGCKLMDEDIPEDLHCFSSLETLDLSYNNFTTLPDSLSHLKKL 905

Query: 779 LNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
             + L  C  L+ LP+LP +++ V    C S+
Sbjct: 906 KTLNLNCCTELKDLPKLPESLQYVGGIDCRSM 937



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 146/632 (23%), Positives = 239/632 (37%), Gaps = 128/632 (20%)

Query: 465  CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKIL--MKSLEKLNLKSLP--------- 513
            C +L +I PSL     L  L++ + TS+  +P  I+  +K+L+ L+ + L          
Sbjct: 784  CKKLDKIPPSLANAESLETLSISE-TSITHVPPSIIHCLKNLKTLDCEGLSHGIWKSLLP 842

Query: 514  ------TTISGLKCLSTLDVSG-DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELL 566
                  T  +GL CL  L++ G  L   + PE +     L  L L       LP S+  L
Sbjct: 843  QFNINQTITTGLGCLKALNLMGCKLMDEDIPEDLHCFSSLETLDLSYNNFTTLPDSLSHL 902

Query: 567  SGLVLLNLKNCRSLEILPVTVSNLKCL-----RSLKLSGCSKLKKFP------------- 608
              L  LNL  C  L+ LP    +L+ +     RS+     +K+   P             
Sbjct: 903  KKLKTLNLNCCTELKDLPKLPESLQYVGGIDCRSMSERYYNKILLIPSSSGHQLYLTFII 962

Query: 609  -----EIVRSMKDLSELFLDGTS-----IKEVPS-----SIELLTKLELLNLSDCKNL-- 651
                 ++   M +         S     I+E PS     ++++      +N  +  N+  
Sbjct: 963  PSKDVDVECDMNEFQHSIFTRRSFELNIIEEKPSMIVHDAVDMFHWFGQINEGNWTNIQY 1022

Query: 652  -----VRLPSSIIALKSLKTLNLSGCFKLENV--PETL-----GQIESLEELD--ISGTA 697
                 +  P +I+  + +   N+ G F   N+  PE L     G+     E+D   SG  
Sbjct: 1023 EQEFSISKPLNIM-YEDVDLSNVCGVFLSTNIEFPENLNHLAIGRFLVSFEIDGKCSGGT 1081

Query: 698  VPHSTS--------WYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDI 749
            + +  S        W +YIPI + +    +    +   CS+ K+ ++ C         D 
Sbjct: 1082 MNYEMSQFKAARFFWAAYIPIWMFKDHSVM----VQRCCSM-KVTISYC--------CDH 1128

Query: 750  GNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV--RVNGC 807
             +   +K      +S +S P    +L+KL        KR  S       IRQ     N C
Sbjct: 1129 IDASKVKIKACGVSSMLSWPNVAEYLAKLFT------KRFCSKRNFYTMIRQHNDHQNEC 1182

Query: 808  ASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAV------SNTRQHLS 861
                   D L++ K D        S     N S    +LR+ L A+         R ++ 
Sbjct: 1183 RC-----DELEVRKDD------FSSSTFESNDSTF--LLRKNLRAILGVMFEEKKRYYMK 1229

Query: 862  VVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCF-GSY 920
               P + I  WF  QN+   + V  P N+   +K +G A+  VF +   S   +C+   Y
Sbjct: 1230 YFFPHTNIFGWFKNQNKKDKVAVKIPVNIEKDRKWMGLAMFVVFSI---SEKASCYCFEY 1286

Query: 921  PTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVN 980
                    I    + I   D+  +  +  L++ +  R   Y    P +  L+   SNHV 
Sbjct: 1287 EIQTKEKIISTQRHSIS-TDQVLEYSNQILFVAFEPRYNWY----PYDE-LKSSSSNHVF 1340

Query: 981  VSFEPWLGQGLEVKMCGLHPVYMDEVEELDQT 1012
            ++F    G  + V+ CG   VY   VE L  T
Sbjct: 1341 INFNT-NGARMRVEFCGARLVYQQNVEGLIHT 1371



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 29/217 (13%)

Query: 629 EVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
           E+  SI  L KL LL+L  C +L   P++I   K+L+TL LSG   LE  PE +G +E L
Sbjct: 673 EIHPSINSLNKLILLDLEGCGDLKHFPANI-RCKNLQTLKLSGT-GLEIFPE-IGHMEHL 729

Query: 689 EELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTD------CNLME 742
             L + G+ + H      Y+   L+   ++  L   S  C +  L          C  ++
Sbjct: 730 THLHLDGSNITHFHPSIGYL-TGLVFLDLSSCLGLSSLPCEIGNLKSLKTLLLKYCKKLD 788

Query: 743 GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
             +P  + N  SL+ L +S+ S   +P SI H  K  N++  DC+ L             
Sbjct: 789 -KIPPSLANAESLETLSISETSITHVPPSIIHCLK--NLKTLDCEGLSH----------- 834

Query: 803 RVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNK 839
                    +LL    + ++ +T + CL +L L+G K
Sbjct: 835 -----GIWKSLLPQFNINQTITTGLGCLKALNLMGCK 866


>gi|356524097|ref|XP_003530669.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1447

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 379/1178 (32%), Positives = 558/1178 (47%), Gaps = 206/1178 (17%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +D R EKL  ++   S+ V+++G+ GMGG+GKTT+A+ +++ + + FE   F+ NVRE+S
Sbjct: 195  LDERVEKLMKVLQVQSNGVKVLGLYGMGGVGKTTLAKALFNNLLNHFEHRCFISNVREVS 254

Query: 61   SK-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            SK  GLVSL+ +++  L      S   + D +     + +  +VLLV+DDV DVKQL +L
Sbjct: 255  SKQDGLVSLRTKIIEDLFP-EPGSPTIISDHV-----KARENRVLLVLDDVDDVKQLDAL 308

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
             G REWF  GSR+IIT+RD  L+K H V+E+Y+   LN+DEAL+LF+  A +  +P +  
Sbjct: 309  IGKREWFYDGSRVIITTRDTVLIKNH-VNELYEVEELNFDEALELFSNHALRRNKPPENF 367

Query: 180  VQLSARIIRYAGGLPLALEVLGSFL-SGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
            + LS +I+   G +PLALEV GSFL   R V+EW   +E+L    P  + D+L+IS+D L
Sbjct: 368  LNLSKKIVSLTGRMPLALEVFGSFLFDKRRVEEWEDAVEKLRQIRPKHLQDVLKISYDAL 427

Query: 239  QELEKKIFLDIACFF--KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV--HNNTLWM 294
             E EK IFLD+AC F   G  RD V + L GCGF   I I VL++KCLI +   +NTLWM
Sbjct: 428  DEEEKCIFLDMACLFVQMGMKRDDVIDVLRGCGFRGEIAITVLVQKCLIKITDEDNTLWM 487

Query: 295  HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD--------- 345
            HD ++++G+QIV  +S  + GKRSRLW   E+  VL    GT  ++GIVLD         
Sbjct: 488  HDQIRDMGRQIVVDESIVDPGKRSRLWDRAEIMSVLKGHMGTRCIQGIVLDFEEDRFYRS 547

Query: 346  -------------------------------NYHH---ENEVYLCASAKAFSKMTNLRLL 371
                                           NY H   E    +    K+F  M NLR L
Sbjct: 548  KAESGFSTNLQWRSSLRNVLGGIIEQCLCLKNYLHPQAEENKEVILHTKSFEPMVNLRQL 607

Query: 372  KICNLQLPNGLEYLSNRLRLLGWRGYPLKFLP--------SNLQMDKTIEIYMCYSRIGE 423
            +I N +L    ++L   L+ L W+G PLK +P        + L +  + +I   +     
Sbjct: 608  QINNRRLEG--KFLPAELKWLQWQGCPLKHMPLKSWPRELAVLDLKNSKKIETLWG---- 661

Query: 424  LWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLII 483
             W   K    L V+ LS+   L  +PD +G   LEK+ LE C  L  IH S+   + L  
Sbjct: 662  -WNDYKVPRNLMVLNLSYCIELTAIPDLSGCRRLEKIDLENCINLTNIHDSIGSLSTLRS 720

Query: 484  LNMKDCTSLITLPGKIL-MKSLEKL------NLKSLPTTISGLKCLSTLDVSGDL----- 531
            L +  C+SLI LP  +  +K LE L       LKSLP  I  LK L  L   G       
Sbjct: 721  LKLTRCSSLINLPIDVSGLKQLESLFLSGCTKLKSLPENIGILKSLKALHADGTAITELP 780

Query: 532  ------------------KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLN 573
                                R  P  + H+  L EL L  + +  LP SI  L+ L  LN
Sbjct: 781  RSIFRLTKLERLVLEGCKHLRRLPSSIGHLCSLKELSLYQSGLEELPDSIGSLNNLERLN 840

Query: 574  LKNCRSLEI-----------------------LPVTVSNLKCLRSLKLSGCSKLKKFPEI 610
            L  C SL +                       LP T+ +L  LR L +  C  L K P  
Sbjct: 841  LMWCESLTVIPDSIGSLISLTQLFFNSTKIKELPSTIGSLYYLRELSVGNCKFLSKLPNS 900

Query: 611  VRSMKDLSELFLDGTSIKEVPSSI---ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL 667
            ++++  + EL LDGT+I ++P  I   +LL KLE++N   CKNL  LP SI  L  L TL
Sbjct: 901  IKTLASVVELQLDGTTITDLPDEIGEMKLLRKLEMMN---CKNLEYLPESIGHLAFLTTL 957

Query: 668  NLSGCFKLENVPETLGQIESLEELDISG----TAVPHSTSWYSYIPINLMRKSVALKLP- 722
            N+     +  +PE++G +E+L  L ++     + +P S      +    M ++    LP 
Sbjct: 958  NMFNG-NIRELPESIGWLENLVTLRLNKCKMLSKLPASIGNLKSLYHFFMEETCVASLPE 1016

Query: 723  SLSGLCSLRKLNLTD----------------------------CNL------------ME 742
            S   L SLR L +                              CNL            + 
Sbjct: 1017 SFGRLSSLRTLRIAKRPNLNTNENSFLAEPEENHNSFVLTPSFCNLTLLTELDARSWRIS 1076

Query: 743  GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
            G +P +   L  L+ L L  N F  LP+S+  LS L  + L +C +L SLP LP ++ ++
Sbjct: 1077 GKIPDEFEKLSQLETLKLGMNDFQKLPSSLKGLSILKVLSLPNCTQLISLPSLPSSLIEL 1136

Query: 803  RVNGCASLVTL-----LDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTR 857
             V  C +L T+     L++LK  K  +  +   D   L G KSL    L   +   S  R
Sbjct: 1137 NVENCYALETIHDMSNLESLKELKL-TNCVKVRDIPGLEGLKSLRRLYLSGCVACSSQIR 1195

Query: 858  QHLSVVV---------PGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHV- 907
            + LS VV         PG ++PEWF     G ++  ++P NL  K  +VG  +    ++ 
Sbjct: 1196 KRLSKVVLKNLQNLSMPGGKLPEWF----SGQTVCFSKPKNLELKGVIVGVVLSINHNIN 1251

Query: 908  --LKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRD-KFGQAGSDHLWLLYLSRQTCYDIR 964
              + N +  +  G           G  ++          +   +H   ++L R   Y   
Sbjct: 1252 IGIPNMQREHMPGVLDVQANVLKQGKTLFSTVLNICGVPRTDEEH---IHLCRFHDYHQL 1308

Query: 965  LPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVY 1002
            + +  + + F  +  N  F+    +GLE+K CG+H ++
Sbjct: 1309 IAILKDGDTFCVSKRNPPFD----KGLELKQCGVHLIF 1342


>gi|255555357|ref|XP_002518715.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223542096|gb|EEF43640.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1094

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 298/742 (40%), Positives = 419/742 (56%), Gaps = 86/742 (11%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M+SR +++  L+   SS+VR++GI GMGGLGKTT+AR +YD I+ +FE   FL N RE  
Sbjct: 202 MESRIQEIESLLCLRSSNVRIVGIWGMGGLGKTTLARAIYDRIAPQFEICYFLSNAREQL 261

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL- 119
            +  L  LQ QL S LL+  + S  N+      +  RL RKKVL+VIDD  D  QLQ L 
Sbjct: 262 QRCTLSELQNQLFSTLLE--EQSTLNL--QRSFIKDRLCRKKVLIVIDDADDSTQLQELL 317

Query: 120 -AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL-Q 177
                ++FGSGSRIIITSRD+ +L+    D++Y    L   EALQLF++KAFK   P  +
Sbjct: 318 LESEPDYFGSGSRIIITSRDKQVLRNIARDKIYAMQKLKKHEALQLFSLKAFKQDNPTCR 377

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
            C   + R+++YA G PLAL VLGS L G+   +W+S LERLE  P  +I D+L+IS+DG
Sbjct: 378 HCRLQAERVVKYAKGNPLALTVLGSALFGKREKDWKSALERLERNPNKKIDDVLRISYDG 437

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGC--GFHPVIGIRVLIEKCLITVHNNT--LW 293
           L   E+ IFLDIACFF+G DRD+VT  L+G     H VI    LI++ +I + +++  L 
Sbjct: 438 LDSEERSIFLDIACFFRGQDRDFVTKTLDGYYGSAHSVIS--TLIDRSVIMLSSDSSKLD 495

Query: 294 MHDLLQELGQQIV--QRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
           +HDLLQE+G++IV  + ++PE    RSRLW  E+VC+VL E+ GTE +EGI LD     +
Sbjct: 496 LHDLLQEMGRKIVFEESKNPE---NRSRLWTPEDVCYVLNENRGTEAIEGISLDKSKATS 552

Query: 352 EVYLCASAKAFSKMTNLRLLKIC-----------------NLQLP-NGLEYLSNRLRLLG 393
           E+ L     AFS+M  LR LK                    LQ+  +GL+ L N LR L 
Sbjct: 553 EIRL--KPDAFSRMCRLRFLKFYKSPGDFYRSPGDRHSKDKLQISRDGLQSLPNELRHLY 610

Query: 394 WRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTG 453
           W  +P+K LP +   +  + +++  S++ +LW G ++L KLK + LS S+ LI +PD + 
Sbjct: 611 WIDFPMKSLPPSFNPENLVVLHLRNSKVKKLWTGTQNLVKLKEIDLSGSKYLIGIPDLSK 670

Query: 454 APNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLP 513
           A  +EK+ L  C  L E+H S+   NKL  LN+  C  L  LP +I  K L+ L L    
Sbjct: 671 AIYIEKIDLSDCDNLEEVHSSIQYLNKLEFLNLWHCNKLRRLPRRIDSKVLKVLKL---- 726

Query: 514 TTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELL---SGLV 570
                          G  + +  PE       L ++ L   AI+ + L++  +   S LV
Sbjct: 727 ---------------GSTRVKRCPEF--QGNQLEDVFLYCPAIKNVTLTVLSILNSSRLV 769

Query: 571 LLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKD-------------- 616
            L +  CR L ILP +   LK L+SL L  CSKL+ FPEI+  M +              
Sbjct: 770 HLFVYRCRRLSILPSSFYKLKSLKSLDLLHCSKLESFPEILEPMYNIFKIDMSYCRNLKS 829

Query: 617 ----------LSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKT 666
                     L+ L L GT+IK++PSSIE L++L+ L+L DCK L  LP SI  L  L+ 
Sbjct: 830 FPNSISNLISLTYLNLAGTAIKQMPSSIEHLSQLDFLDLKDCKYLDSLPVSIRELPQLEE 889

Query: 667 LNLSGCFKLENVPETLGQIESL 688
           + L+ C  L ++PE    ++ L
Sbjct: 890 MYLTSCESLHSLPELPSSLKKL 911



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 226/519 (43%), Gaps = 100/519 (19%)

Query: 546  LSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
            L  L+     ++ LP S      LV+L+L+N + ++ L     NL  L+ + LSG   L 
Sbjct: 606  LRHLYWIDFPMKSLPPSFNP-ENLVVLHLRNSK-VKKLWTGTQNLVKLKEIDLSGSKYLI 663

Query: 606  KFPEIVRSMK----DLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
              P++ +++     DLS    D  +++EV SSI+ L KLE LNL  C  L RLP  I + 
Sbjct: 664  GIPDLSKAIYIEKIDLS----DCDNLEEVHSSIQYLNKLEFLNLWHCNKLRRLPRRIDS- 718

Query: 662  KSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHST------------------- 702
            K LK L L G  +++  PE  G    LE++ +   A+ + T                   
Sbjct: 719  KVLKVLKL-GSTRVKRCPEFQGN--QLEDVFLYCPAIKNVTLTVLSILNSSRLVHLFVYR 775

Query: 703  ---------SWYSYIPINLMRKSVALKLPS----LSGLCSLRKLNLTDCNLMEGALPSDI 749
                     S+Y    +  +      KL S    L  + ++ K++++ C  ++ + P+ I
Sbjct: 776  CRRLSILPSSFYKLKSLKSLDLLHCSKLESFPEILEPMYNIFKIDMSYCRNLK-SFPNSI 834

Query: 750  GNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKR--------------------- 788
             NL SL  L L+  +   +P+SI HLS+L  ++L+DCK                      
Sbjct: 835  SNLISLTYLNLAGTAIKQMPSSIEHLSQLDFLDLKDCKYLDSLPVSIRELPQLEEMYLTS 894

Query: 789  ---LQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSM 845
               L SLP+LP +++++R   C SL  +     L   ++T   CL     L  KS   + 
Sbjct: 895  CESLHSLPELPSSLKKLRAENCKSLERVTSYKNL--GEATFANCLR----LDQKSFQITD 948

Query: 846  LREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
            LR   E +   R    ++ PGSE+P  F  Q+ GSS+T+   S+L N+K     A C VF
Sbjct: 949  LR-VPECIYKERY---LLYPGSEVPGCFSSQSMGSSVTMQ--SSL-NEKLFKDAAFCVVF 1001

Query: 906  HVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRL 965
               K+S   +C       + N   G    G  + +      +DH+ + +     C D+  
Sbjct: 1002 EFKKSS---DCVFEVRYREDNPE-GRIRSGFPYSETPILTNTDHVLIWW---DECIDLN- 1053

Query: 966  PLESNLEPFESNHVNVSFEPWLGQG-----LEVKMCGLH 999
             +   +  F+   V     P  GQ       +VK CGLH
Sbjct: 1054 NISGVVHSFDFYPVT---HPKTGQKEIVKHCKVKRCGLH 1089


>gi|357462269|ref|XP_003601416.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago
           truncatula]
 gi|355490464|gb|AES71667.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago
           truncatula]
          Length = 1743

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 295/732 (40%), Positives = 423/732 (57%), Gaps = 59/732 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D R E+L   +  G  DV  IGI GMGG+GKTT+   ++  I  +F+ S F+ NVRE+S
Sbjct: 190 IDVRLEELYSTLKLGLEDVHFIGIWGMGGIGKTTLTTALFKKIKSQFDVSCFIANVREVS 249

Query: 61  SKGG--LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            +    L  LQ ++LS L  +    I  +  G D L + L  KKVLLV+DDV    QL++
Sbjct: 250 GERNQYLQQLQNKILSHL-NIKGMVIETLSQGKDSLRNLLSNKKVLLVLDDVSSKSQLEN 308

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGV-DEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
           LAG++EWFG GSRII+T+RD+HLL +H V  E+Y+   LN  E+L LF  KAFK   P +
Sbjct: 309 LAGSQEWFGRGSRIIVTTRDKHLLISHDVLFEMYESKILNKSESLHLFCEKAFKEDAPKE 368

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
             V+LS  ++ YA GLPLALEVLGSFL GRS+ +W   L +++  P  +IL+ L+IS+D 
Sbjct: 369 GFVELSESVVEYARGLPLALEVLGSFLCGRSLSDWEDALIKIKQVPHDDILNKLRISYDM 428

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDL 297
           L++  K IFLDIACFFKG  +  V   LE CG HP +GI VLIEK L+T     +W+HD+
Sbjct: 429 LEDEHKTIFLDIACFFKGWYKHKVIQILESCGLHPTVGINVLIEKSLLTFDGRVIWLHDM 488

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           L+E+ + IV ++SP + G+RSRLW  E++  VL ++ GTE+V+GIVL +    + +Y   
Sbjct: 489 LEEMAKTIVIQESPNDPGRRSRLWSLEDIDQVLKKNKGTEIVQGIVLKS--SPSTLYEAH 546

Query: 358 -SAKAFSKMTNLRLLKI-CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
              +AF+KM NLRLL I C+L L  GL+ LS+ L++L W GYPL  LP  +Q+D+ + + 
Sbjct: 547 WDPEAFTKMGNLRLLIILCDLHLSLGLKCLSSSLKVLVWWGYPLNSLPVGIQLDELVHLQ 606

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           M  S+I +LW G ++  KLKV+ LS+S++L + P+ +G PNLE+L    C +L E+H S+
Sbjct: 607 MINSKIKQLWNGNEYYGKLKVIDLSNSKDLRQTPNVSGIPNLEELYFNDCIKLVEVHQSI 666

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSL----------------- 512
             H KL IL++  C  L   P K+ M SL+ L      N+K L                 
Sbjct: 667 RQHKKLRILSLMGCVDLKIFPKKLEMFSLKMLFLSYCSNIKRLPDFGKNMTCITELNLLN 726

Query: 513 -------PTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIEL 565
                  P +I  LK L  L++SG  K    P+ +  +  L ++ L  TAIR L  S+  
Sbjct: 727 CENLLSLPNSICNLKSLRILNISGCSKICNLPDGINQIMALEDIDLSRTAIRDLDPSLLQ 786

Query: 566 LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRS---------MKD 616
           L  L  L+L++CR     P T S+     +  L    K   FP    S         +  
Sbjct: 787 LGNLKRLSLRSCRD----PATNSSW----NFHLPFGKKFSFFPAQTTSLTLPPFLSGLSS 838

Query: 617 LSELFLDGTSIKE--VPSSIELLTKLELLNLSDCKNLVRLPSSIIA-LKSLKTLNLSGCF 673
           L+EL L   ++ +  +P  I+ L+ LE L LS   N V LP+  I+ L  L+ L L  C 
Sbjct: 839 LTELDLSDCNLTDSSIPHDIDCLSSLERLILSG-NNFVCLPTHYISNLSKLRYLELEDCP 897

Query: 674 KLENVPETLGQI 685
           +L+++P    Q+
Sbjct: 898 QLQSLPMLQPQV 909



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 121/363 (33%), Positives = 180/363 (49%), Gaps = 62/363 (17%)

Query: 518 GLKCLST---LDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL 574
           GLKCLS+   + V         P  ++ ++ L  L +  + I+ L    E    L +++L
Sbjct: 572 GLKCLSSSLKVLVWWGYPLNSLPVGIQ-LDELVHLQMINSKIKQLWNGNEYYGKLKVIDL 630

Query: 575 KNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSS 633
            N + L   P  VS +  L  L  + C KL +  + +R  K L  L L G   +K  P  
Sbjct: 631 SNSKDLRQTP-NVSGIPNLEELYFNDCIKLVEVHQSIRQHKKLRILSLMGCVDLKIFPKK 689

Query: 634 IELLTKLELLNLSDCKNLVRLP------------------------SSIIALKSLKTLNL 669
           +E+ + L++L LS C N+ RLP                        +SI  LKSL+ LN+
Sbjct: 690 LEMFS-LKMLFLSYCSNIKRLPDFGKNMTCITELNLLNCENLLSLPNSICNLKSLRILNI 748

Query: 670 SGCFKLENVPETLGQIESLEELDISGTAV------------------------PHSTSWY 705
           SGC K+ N+P+ + QI +LE++D+S TA+                          ++SW 
Sbjct: 749 SGCSKICNLPDGINQIMALEDIDLSRTAIRDLDPSLLQLGNLKRLSLRSCRDPATNSSWN 808

Query: 706 SYIPIN-----LMRKSVALKLPS-LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELY 759
            ++P          ++ +L LP  LSGL SL +L+L+DCNL + ++P DI  L SL+ L 
Sbjct: 809 FHLPFGKKFSFFPAQTTSLTLPPFLSGLSSLTELDLSDCNLTDSSIPHDIDCLSSLERLI 868

Query: 760 LSKNSFVSLPTS-ITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALK 818
           LS N+FV LPT  I++LSKL  +ELEDC +LQSLP L P +R    +  A     LD  K
Sbjct: 869 LSGNNFVCLPTHYISNLSKLRYLELEDCPQLQSLPMLQPQVRLYVTDSDAREAYALDPQK 928

Query: 819 LCK 821
           + K
Sbjct: 929 IWK 931



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/159 (44%), Positives = 102/159 (64%), Gaps = 4/159 (2%)

Query: 327  CHVLTESTGTELVEGIVLDNYHHENEVYLCA-SAKAFSKMTNLRLLKI-CNLQLPNGLEY 384
            C +     GTELV+GIVL +    + +Y      +AFSKM NLRLL I C+L L  GL+ 
Sbjct: 1580 CFITNVREGTELVQGIVLKS--SPSTLYEAHWDPEAFSKMGNLRLLIILCDLHLSLGLKC 1637

Query: 385  LSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSEN 444
            LS+ L++  W GYPL  LP  +Q+D+ + + M  S++ +LW G K+  KLKV+ LS+S++
Sbjct: 1638 LSSSLKVPVWWGYPLNSLPVGVQLDELVNLQMINSKVKQLWNGNKYYGKLKVIDLSNSKD 1697

Query: 445  LIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLII 483
            L + P+ +G PNLE+L L  CT+L E+H S+  H KL +
Sbjct: 1698 LRQTPNVSGIPNLEELYLNDCTKLVEVHQSIRQHKKLRV 1736


>gi|255561510|ref|XP_002521765.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223538978|gb|EEF40575.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1018

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 255/580 (43%), Positives = 363/580 (62%), Gaps = 38/580 (6%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
           V M+GI GMGG+GKTTIA+++YD++S +FE   FL NV+E   K G   LQ++LLS +L 
Sbjct: 208 VHMVGIWGMGGIGKTTIAKLIYDMLSSQFEVHCFLSNVKEHFEKHGAAVLQQKLLSNVLS 267

Query: 79  LADN-SIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSR 137
              + + W      +++   L  +KVLLV+DDV D KQL++LA    WFG GSRIIITSR
Sbjct: 268 ERRSLNAWTFNASFNVIKRALHHRKVLLVLDDVDDYKQLEALAREPNWFGEGSRIIITSR 327

Query: 138 DEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLAL 197
           D HLL +HGV+ +Y+   L  D ALQLF++ AFK      E ++L+ +   YA GLPLA+
Sbjct: 328 DYHLLDSHGVESIYEVQYLKTDHALQLFSLHAFKQNNAKIEYLELTKQFSSYAKGLPLAV 387

Query: 198 EVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGND 257
           +V GSFL+GR++ EW+S   +L   P   I D+L+ISF+GL E ++ +FLDIACFF G  
Sbjct: 388 KVFGSFLNGRNILEWQSVKNKLAKIPCIGIHDVLRISFEGLDETQRDVFLDIACFFNGLS 447

Query: 258 RDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKR 317
           +++  + L GCGF P I   VL +K LIT+ +N L +HDLL+E+G +IV ++S EE GKR
Sbjct: 448 KEFARDILGGCGFFPDIAFAVLKDKALITIDDNELLVHDLLREMGHEIVYQESKEEPGKR 507

Query: 318 SRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLK----- 372
           SRLW  +++ HVLT+STGT++VEGI LD +       +  S++AF+KM NLR+LK     
Sbjct: 508 SRLWIPDDIFHVLTKSTGTKIVEGIFLDTFKVRK---MHLSSEAFAKMRNLRMLKFYYTG 564

Query: 373 ---ICNLQLPN-GLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGI 428
              +  + LP+ GL Y+S+ LRL  W GYP K LPS+   +  IE+ +  S + +LW G+
Sbjct: 565 SKYMNKVHLPDEGLHYMSSNLRLFHWEGYPSKSLPSSFHAENLIELNLVGSNLEQLWTGV 624

Query: 429 KHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKD 488
           +HL  LK + LS+S +L R+PD + A NLE++ L  C  L  +  S+   NKL+ L++ D
Sbjct: 625 QHLVNLKRIDLSYSRHLTRIPDLSKAQNLERMELTTCQNLAAVSSSVQCLNKLVFLDLSD 684

Query: 489 CTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSE 548
           CT+L +LPG I + SL+ L L    T+ S L  L   ++SGD++F               
Sbjct: 685 CTNLRSLPGGINLNSLKALVL----TSCSNLAKLP--EISGDIRF--------------- 723

Query: 549 LHLEGTAIRGLPLSIELL----SGLVLLNLKNCRSLEILP 584
           L L GTAI  LP  +  L      + +L   +C SLE +P
Sbjct: 724 LCLSGTAIEELPQRLRCLLDVPPCIKILKAWHCTSLEAIP 763



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 78/151 (51%), Gaps = 8/151 (5%)

Query: 549 LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
            H EG   + LP S      L+ LNL    +LE L   V +L  L+ + LS    L + P
Sbjct: 588 FHWEGYPSKSLPSSFHA-ENLIELNLVG-SNLEQLWTGVQHLVNLKRIDLSYSRHLTRIP 645

Query: 609 EIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL 667
           ++ ++ ++L  + L    ++  V SS++ L KL  L+LSDC NL  LP   I L SLK L
Sbjct: 646 DLSKA-QNLERMELTTCQNLAAVSSSVQCLNKLVFLDLSDCTNLRSLPGG-INLNSLKAL 703

Query: 668 NLSGCFKLENVPETLGQIESLEELDISGTAV 698
            L+ C  L  +PE  G I     L +SGTA+
Sbjct: 704 VLTSCSNLAKLPEISGDIRF---LCLSGTAI 731



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 89/179 (49%), Gaps = 19/179 (10%)

Query: 508 NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTA-IRGLPLSIELL 566
           NL+ L T +  L  L  +D+S        P++ +  ++L  + L     +  +  S++ L
Sbjct: 616 NLEQLWTGVQHLVNLKRIDLSYSRHLTRIPDLSK-AQNLERMELTTCQNLAAVSSSVQCL 674

Query: 567 SGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS 626
           + LV L+L +C +L  LP  + NL  L++L L+ CS L K PEI     D+  L L GT+
Sbjct: 675 NKLVFLDLSDCTNLRSLPGGI-NLNSLKALVLTSCSNLAKLPEI---SGDIRFLCLSGTA 730

Query: 627 IKEVPSSIELLTK----LELLNLSDCKNLVRLPSSIIALKSL-----KTLNLSGCFKLE 676
           I+E+P  +  L      +++L    C +L  +P     +KSL     +  + + CF L+
Sbjct: 731 IEELPQRLRCLLDVPPCIKILKAWHCTSLEAIPR----IKSLWEPDVEYWDFANCFNLD 785


>gi|47681363|gb|AAT37497.1| N-like protein [Nicotiana tabacum]
          Length = 941

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 287/763 (37%), Positives = 442/763 (57%), Gaps = 53/763 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLI------SHEFEASGFLD 54
           +D+  E++  L+  G +DVR++GI GMGG+GKTTIAR ++D +      S++F+ + FL 
Sbjct: 191 IDTHLEEIESLLGIGINDVRIVGIWGMGGVGKTTIARAMFDTLLGRRDSSYQFDGACFLK 250

Query: 55  NVREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
           +++E  +K G+ SLQ  LL +LL+   N   N  DG   + SRL+ KKVL+V+DD+ D  
Sbjct: 251 DIKE--NKRGMHSLQNTLLFELLRENANYN-NEDDGKHQMASRLRSKKVLIVLDDIDDKD 307

Query: 115 Q-LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY 173
             L+ LAG+ +WFG+GSRII+T+RD+HL+  + +  +Y+   L   EA+QLF   AFK  
Sbjct: 308 HYLEYLAGDLDWFGNGSRIIVTTRDKHLIGKNDI--IYEVTALPDHEAIQLFYQHAFKKE 365

Query: 174 QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
            P +   +LS  ++ +A GLPLAL+V GS L  R +  W+S +E+++I P S+I++ L+I
Sbjct: 366 VPDECFKELSLEVVNHAKGLPLALKVWGSSLHKRDITVWKSAIEQMKINPNSKIVEKLKI 425

Query: 234 SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTL 292
           S+DGL+ +++++FLDIACFF+G  +DY+   L+ C F    G+ VLIEK L+ +   N +
Sbjct: 426 SYDGLESMQQEMFLDIACFFRGRQKDYIMQVLKSCHFGAEYGLDVLIEKSLVFISEYNQV 485

Query: 293 WMHDLLQELGQQIVQ-RQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
            MHDL+Q++G+ IV  ++ P   G+RSRLW  E+V  V+  + GT  VE I +   H++ 
Sbjct: 486 EMHDLIQDMGKYIVNFKKDP---GERSRLWLAEDVEEVMNNNAGTMSVEVIWV---HYDF 539

Query: 352 EVYLCASAKAFSKMTNLRLLKI----CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
            +Y   S  A   M  LR+L I     +      +EYL + LR      YP + LPS   
Sbjct: 540 GLYF--SNDAMKNMKRLRILHIKGYLSSTSHDGSIEYLPSNLRWFVLDDYPWESLPSTFD 597

Query: 408 MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
           +   + + +  S +  LW   KHL  L+ + LS S  L R PDFTG PNLE L +  C  
Sbjct: 598 LKMLVHLELSRSSLHYLWTETKHLPSLRRIDLSSSRRLRRTPDFTGMPNLEYLNMLYCRN 657

Query: 468 LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDV 527
           L E+H SL   +KLI LN+ +C SL   P  + ++SLE L+L+          C S    
Sbjct: 658 LEEVHHSLRCCSKLIRLNLNNCKSLKRFPC-VNVESLEYLSLEY---------CSS---- 703

Query: 528 SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSI-ELLSGLVLLNLKNCRSLEILPVT 586
                  +FPEI   M+   ++H++G+ IR LP SI +  + +  L+L+    L  LP +
Sbjct: 704 -----LEKFPEIHGRMKPEIQIHMQGSGIRELPSSITQYQTHITKLDLRGMEKLVALPSS 758

Query: 587 VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLS 646
           +  LK L SL +SGC KL+  PE V  +++L EL    T I   PSSI  L+KL++ +  
Sbjct: 759 ICRLKSLVSLSVSGCFKLESLPEEVGDLENLEELDASCTLISRPPSSIIRLSKLKIFDFG 818

Query: 647 DCKNLVR--LPSSIIALKSLKTLNLSGCFKLE-NVPETLGQIESLEELDISGT---AVPH 700
             K+ V   LP  +   +SL+TL+L  C  ++  +PE +G + SL++L +SG     +P 
Sbjct: 819 SSKDRVHFELPPVVEGFRSLETLSLRNCNLIDGGLPEDMGSLSSLKKLYLSGNNFEHLPR 878

Query: 701 STSWYSYIPINLMRKSVAL-KLPSLSGLCSLRKLNLTDCNLME 742
           S +    + I  +R    L +LP  +G+ +L  L+L  C+ +E
Sbjct: 879 SIAQLGALRILELRNCKRLTQLPEFTGMLNLEYLDLEGCSYLE 921



 Score =  182 bits (463), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 126/319 (39%), Positives = 185/319 (57%), Gaps = 16/319 (5%)

Query: 504 LEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI--VEHMEHLSELHLEGTAIRGLPL 561
           L + +L  L T    L  L  +D+S   + R  P+   + ++E+L+ L+     +  +  
Sbjct: 606 LSRSSLHYLWTETKHLPSLRRIDLSSSRRLRRTPDFTGMPNLEYLNMLYCRN--LEEVHH 663

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
           S+   S L+ LNL NC+SL+  P    N++ L  L L  CS L+KFPEI   MK   ++ 
Sbjct: 664 SLRCCSKLIRLNLNNCKSLKRFPCV--NVESLEYLSLEYCSSLEKFPEIHGRMKPEIQIH 721

Query: 622 LDGTSIKEVPSSI-ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
           + G+ I+E+PSSI +  T +  L+L   + LV LPSSI  LKSL +L++SGCFKLE++PE
Sbjct: 722 MQGSGIRELPSSITQYQTHITKLDLRGMEKLVALPSSICRLKSLVSLSVSGCFKLESLPE 781

Query: 681 TLGQIESLEELDISGTAV---PHSTSWYSYIPI---NLMRKSVALKLPSL-SGLCSLRKL 733
            +G +E+LEELD S T +   P S    S + I      +  V  +LP +  G  SL  L
Sbjct: 782 EVGDLENLEELDASCTLISRPPSSIIRLSKLKIFDFGSSKDRVHFELPPVVEGFRSLETL 841

Query: 734 NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
           +L +CNL++G LP D+G+L SLK+LYLS N+F  LP SI  L  L  +EL +CKRL  LP
Sbjct: 842 SLRNCNLIDGGLPEDMGSLSSLKKLYLSGNNFEHLPRSIAQLGALRILELRNCKRLTQLP 901

Query: 794 QLPP--NIRQVRVNGCASL 810
           +     N+  + + GC+ L
Sbjct: 902 EFTGMLNLEYLDLEGCSYL 920



 Score = 44.7 bits (104), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 37/60 (61%)

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
           ++Y+  +    L + I  L  L+++ L + + L ++P+FTG  NLE L LEGC+ L E+H
Sbjct: 865 KLYLSGNNFEHLPRSIAQLGALRILELRNCKRLTQLPEFTGMLNLEYLDLEGCSYLEEVH 924


>gi|356515308|ref|XP_003526343.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1464

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 272/691 (39%), Positives = 410/691 (59%), Gaps = 35/691 (5%)

Query: 1   MDSRCEKLRFLMD-SGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +++R  +L+ L+      D+R+IGI G+GG+GKTTIAR +Y+LI+ +FEA+ FL ++RE 
Sbjct: 198 IENRISELKLLLHIEPGEDIRVIGIYGLGGIGKTTIARALYNLIAGQFEATSFLTDIRES 257

Query: 60  SS-KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
           S+ + GLV LQ  LL   +   +  + +++ GI ++  RL  KKVLL++DDV  ++QLQ+
Sbjct: 258 SNQRQGLVQLQETLLFDTVGDKNIKLGSIYKGIPIIKKRLCCKKVLLILDDVDKLEQLQA 317

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           LAG R+WFG GS IIIT+RD+HLL    VD+ Y+   LN+DEA  LF   AFK   P   
Sbjct: 318 LAGGRDWFGFGSVIIITTRDKHLLAAQQVDKTYEVKKLNHDEAFDLFTWSAFKRKAPDAG 377

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
              +S R++ YA GLPLAL+V+GS L G++V+EW+S L + E  P  E+ ++L+++FD L
Sbjct: 378 YFDISNRVVLYAEGLPLALKVMGSNLFGKTVEEWKSALGKYEKIPNKEVQNVLRVTFDNL 437

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDL 297
           +E EK+IFLDIACFFKG   +Y+   L+ CG +P  GI VL+++ L+++   + L MHDL
Sbjct: 438 EENEKEIFLDIACFFKGETMEYIEKTLQACGLYPKFGISVLVDRSLVSIDKYDRLRMHDL 497

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           +Q++G++IV+  SP E GKRSRLW  E+V  VL+E+TGT  ++G+++D    +  V+L  
Sbjct: 498 IQDMGREIVREVSPLEPGKRSRLWYHEDVFEVLSENTGTYRIQGMMVD-LPDQYTVHL-- 554

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
             ++F KM NL++L + +       ++L N LRLL W  YP   LPS+ Q  K + + + 
Sbjct: 555 KDESFKKMRNLKILIVRSGHFFGSPQHLPNNLRLLDWMEYPSSSLPSSFQPKKLVVLNLS 614

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
           +SR   + +  K+LD L  M L+H E L ++PD TG PNL +L L+ CT L E+H S+  
Sbjct: 615 HSRFT-MQEPFKYLDSLTSMDLTHCELLTKLPDITGVPNLTELHLDYCTNLEEVHDSVGF 673

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
             KL+ L    CT L   P  + + SL  L L           C S          + FP
Sbjct: 674 LEKLVELRAYGCTKLKVFPSALRLASLRSLILNW---------CSS---------LQNFP 715

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
            I+  M++L  + ++ T IR LP SI  L GL  L++ +C SL+ LP     L+ L +L 
Sbjct: 716 AILGKMDNLKSVSIDSTGIRELPPSIGNLVGLQELSMTSCLSLKELPDNFDMLQNLINLD 775

Query: 598 LSGCSKLKKFPEIVRSMKDLSELFLDGTSI---------KEVPSSIELLTKLELLNLSDC 648
           + GC +L+ F   +R M   +  F +  S+         +++P       K+  L LS  
Sbjct: 776 IEGCPQLRSFLTKLRDMGQSTLTFGNIQSLNLENCGLIDEDLPIIFHCFPKVSSLVLSK- 834

Query: 649 KNLVRLPSSIIALKSLKTLNLSGCFKLENVP 679
            + V LP  I     L+ L+L  C KL+ +P
Sbjct: 835 NDFVALPICIQEFPCLELLHLDNCKKLQEIP 865



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 134/517 (25%), Positives = 217/517 (41%), Gaps = 93/517 (17%)

Query: 494  TLPGKILMKSLEKLNLK----SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSEL 549
            +LP     K L  LNL     ++      L  L+++D++      + P+I   + +L+EL
Sbjct: 598  SLPSSFQPKKLVVLNLSHSRFTMQEPFKYLDSLTSMDLTHCELLTKLPDIT-GVPNLTEL 656

Query: 550  HLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
            HL+  T +  +  S+  L  LV L    C  L++ P  +  L  LRSL L+ CS L+ FP
Sbjct: 657  HLDYCTNLEEVHDSVGFLEKLVELRAYGCTKLKVFPSAL-RLASLRSLILNWCSSLQNFP 715

Query: 609  EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
             I+  M +L  + +D T I+E+P SI  L  L+ L+++ C +L  LP +   L++L  L+
Sbjct: 716  AILGKMDNLKSVSIDSTGIRELPPSIGNLVGLQELSMTSCLSLKELPDNFDMLQNLINLD 775

Query: 669  LSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLC 728
            + GC      P+    +  L ++  S                                  
Sbjct: 776  IEGC------PQLRSFLTKLRDMGQSTLT-----------------------------FG 800

Query: 729  SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKR 788
            +++ LNL +C L++  LP        +  L LSKN FV+LP  I     L  + L++CK+
Sbjct: 801  NIQSLNLENCGLIDEDLPIIFHCFPKVSSLVLSKNDFVALPICIQEFPCLELLHLDNCKK 860

Query: 789  LQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLRE 848
            LQ +P  PPNI+ V    C SL    ++  L  S  T   C                   
Sbjct: 861  LQEIPGFPPNIQYVNARNCTSLTA--ESSNLLLSQETFEEC------------------- 899

Query: 849  YLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVL 908
                       + V+VPG+ +PEWF +  +G  +T       + ++K     +C  F + 
Sbjct: 900  ----------EMQVMVPGTRVPEWFDHITKGEYMT------FWVREKFPATILC--FALA 941

Query: 909  KNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLE 968
              S     F       +N   G  +Y +     F    +DH+WL  L        R    
Sbjct: 942  VESEMKESFDCEIRFYIN---GDEVYELEMPRNFSDMVTDHVWLYDLRTHPSIQWR---- 994

Query: 969  SNLEPF---ESNHVNVSFEPWLG-QGLEVKMCGLHPV 1001
             +L+ +   + N V +S E  LG   + V  CG+H +
Sbjct: 995  -SLDLYLMDDWNQVEISCEKILGASNVTVSWCGVHVI 1030


>gi|357468645|ref|XP_003604607.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
 gi|355505662|gb|AES86804.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
          Length = 936

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/567 (42%), Positives = 355/567 (62%), Gaps = 24/567 (4%)

Query: 1   MDSRCEKLRFLMDSG-SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +DSR + +  L+D+  ++DV ++G+ GMGG+GKTT+A+ +Y+ I   FE   F+ N+RE+
Sbjct: 217 IDSRVQDMIQLLDTQQTNDVLLLGMWGMGGIGKTTVAKAIYNKIGRNFEGRSFIANIREV 276

Query: 60  SSKG-GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
             K  G V+LQ QL+  + K     I NV  GI +L  RL  K+VLLV+DDV  + QL +
Sbjct: 277 WGKDCGQVNLQEQLMYDIFKETTTKIQNVESGISILNGRLCHKRVLLVLDDVNKLDQLNA 336

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G+ +WF  GSRIIIT+RD+H+L+ + VD++Y    ++  E+L+LF+  AFK  +P ++
Sbjct: 337 LCGSCKWFAPGSRIIITTRDKHILRGNRVDKIYIMKEMDESESLELFSWHAFKQARPSKD 396

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             ++S  +++Y+G LPLALEVLGS+L  R V EW   LE+L+  P  ++   L+IS+DGL
Sbjct: 397 FSEISTNVVQYSGRLPLALEVLGSYLFDREVTEWICVLEKLKRIPNDQVHQKLKISYDGL 456

Query: 239 Q-ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHD 296
             + EK IFLDIACFF G DR+ V + L G GF   IGI VL+E+ L+TV + N L MHD
Sbjct: 457 NDDTEKSIFLDIACFFIGMDRNDVIHILNGSGFFAEIGISVLVERSLVTVDDKNKLGMHD 516

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL+++G++I++ +SP E  +RSRLW  ++V  VL+E TGT+ VEG+ L    H  + +  
Sbjct: 517 LLRDMGREIIREKSPMEPEERSRLWFHDDVLDVLSEHTGTKAVEGLTLKMPCHSAQRF-- 574

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            S K F  M  LRLL++  +QL    +Y+S  L+ L W G+PL+ +PSN      + I +
Sbjct: 575 -STKTFENMKKLRLLQLSGVQLDGDFKYISRNLKWLHWNGFPLRCIPSNFYQRNIVSIEL 633

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             S    +WK I+ +++LK++ LSHS +L + PDF+  PNLEKL+LE C RL ++  S+ 
Sbjct: 634 ENSNAKLVWKEIQRMEQLKILNLSHSHHLTQTPDFSYLPNLEKLVLEDCPRLSQVSHSIG 693

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
              K++++N+KDC SL                  SLP  I  LK L+TL +SG L   + 
Sbjct: 694 HLKKVVLINLKDCISLC-----------------SLPRNIYTLKTLNTLILSGCLMIDKL 736

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSI 563
            E +E ME L+ L    T I  +P S+
Sbjct: 737 EEDLEQMESLTTLIANNTGITKVPFSL 763



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 141/304 (46%), Gaps = 39/304 (12%)

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
           LS + + GD K+           +L  LH  G  +R +P +      +V + L+N  + +
Sbjct: 590 LSGVQLDGDFKYIS--------RNLKWLHWNGFPLRCIPSNF-YQRNIVSIELENSNA-K 639

Query: 582 ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKL 640
           ++   +  ++ L+ L LS    L + P+    + +L +L L D   + +V  SI  L K+
Sbjct: 640 LVWKEIQRMEQLKILNLSHSHHLTQTPDF-SYLPNLEKLVLEDCPRLSQVSHSIGHLKKV 698

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
            L+NL DC +L  LP +I  LK+L TL LSGC  ++ + E L Q+ESL  L  + T +  
Sbjct: 699 VLINLKDCISLCSLPRNIYTLKTLNTLILSGCLMIDKLEEDLEQMESLTTLIANNTGI-- 756

Query: 701 STSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
                + +P +L+R S ++   SL G     +             PS I +       ++
Sbjct: 757 -----TKVPFSLVR-SKSIGFISLCGYEGFSR----------DVFPSIIWS-------WM 793

Query: 761 SKNSFVSLPTSITHLSKLLNIELEDC--KRLQSLPQLPPNIRQVRVNGCASLVTLLDALK 818
           S N+      + +H+S L+++E   C    L S+  + P ++ + +   + L    DA +
Sbjct: 794 SPNNLSPAFQTASHMSSLVSLEASTCIFHDLSSISIVLPKLQSLWLTCGSELQLSQDATR 853

Query: 819 LCKS 822
           +  +
Sbjct: 854 IVNA 857


>gi|147859369|emb|CAN83953.1| hypothetical protein VITISV_018322 [Vitis vinifera]
          Length = 996

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 312/887 (35%), Positives = 465/887 (52%), Gaps = 96/887 (10%)

Query: 52  FLDNVREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVV 111
           FL +V+++  K GL  LQ+ LL+ + K  ++ I N++ G  ++ + L  +K L+V+DDV 
Sbjct: 68  FLGDVKKVYKKKGLPCLQKLLLNDIQKGENSKISNIYQGARVIQNSLYLRKALIVLDDVD 127

Query: 112 DVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFK 171
           D+ QL+ L GN  W+G GS IIIT+RD+  L T  VD +Y+  GL   EAL+LF+  A +
Sbjct: 128 DMDQLEFLVGNHAWYGKGSIIIITTRDKQCLNTLKVDYLYEVEGLKDYEALKLFSQYASE 187

Query: 172 TYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDIL 231
              P ++   LS R+I Y  GLPLAL+VLGS L G++  EW S L +LE EP  +I ++L
Sbjct: 188 PNLPKKDFKFLSYRVIHYCEGLPLALKVLGSLLCGKTKGEWTSELHKLEKEPEMKIDNLL 247

Query: 232 QISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT 291
           +ISFDGL+   + I LDIACFF+G D+D+     +G   +    I VL+++CLIT+ NN 
Sbjct: 248 KISFDGLETTPQMILLDIACFFQGEDKDFALKIWDGYELYGERNIGVLLQRCLITISNNR 307

Query: 292 LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
           L MH L++++ ++IV+ Q P++  K SRLW ++++        G E VE I LD    + 
Sbjct: 308 LHMHGLIEKMCKKIVREQHPKDPSKWSRLWNQDDIYCAFVSEKGMENVETISLDLSRSKE 367

Query: 352 EVY----LCASAKAFSKMTNLRLLKI-------CNLQLPNGLEYLSNRLRLLGWRGYPLK 400
           + +    +    K F+KM  LRLLK+       C + LP G E+  N L  L W G  L 
Sbjct: 368 KWFTTKIVAQMKKVFAKMQKLRLLKVYYSHGVECKMLLPKGFEFPPN-LNYLHWEG--LV 424

Query: 401 FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
            LPSN   +K + I +  S I EL  G K L +LK + LS+S+ L ++P  +  P LE L
Sbjct: 425 SLPSNFHGEKLVAISLKNSNIKELLIGEKCLAELKFIDLSNSQQLSKIPKLSRMPKLEIL 484

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKIL-MKSLEKLN-----LKSLPT 514
            L GC    ++H S+                     GK   MK L  LN     ++ LP+
Sbjct: 485 NLGGCVNFCKLHSSI---------------------GKFFEMKFLRVLNFRESGIRELPS 523

Query: 515 TISGLKCLSTLDVSGDLKFREFPE-IVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLN 573
           +I  L  L +L +S   KF +FP+     M  L  L L  + I+ LP SIE L  L +L 
Sbjct: 524 SIGSLTSLESLWLSKCSKFEKFPDNFFVTMRRLRILGLSDSGIKELPTSIECLEALEVLL 583

Query: 574 LKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSS 633
           L NC + E                        KFPEI ++M++L  L L+ + IKE+   
Sbjct: 584 LDNCSNFE------------------------KFPEIQKNMENLDRLNLEDSGIKELSCL 619

Query: 634 IELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDI 693
           I  L +L  L LS CKNL  +PS I+ L+SL+   L  C  L  + E +   + L   + 
Sbjct: 620 IGHLPRLVSLELSKCKNLRSVPSGILQLESLRMCYLFDCSNL--IMEDMEHSKGLSLRES 677

Query: 694 SGTAVPHSTSWY-------SYIP--INLMRKSVAL--------KLPSLSGLCSLRKLNLT 736
           + T +P S             +P  I + R S  +        KLP       L +LN++
Sbjct: 678 AITELPSSIRLMLSNCENLETLPNSIGMTRVSELVVHNCPKLHKLPDNLRSMQLTELNVS 737

Query: 737 DCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP 796
            CNLM GA+P D+  L SLK+L +S N+   +P  I  LS+L  + + +C  L+ +P+LP
Sbjct: 738 GCNLMAGAIPDDLWCLFSLKDLNVSGNNIDCIPGGIIRLSRLRYLTMNNCLMLKEIPELP 797

Query: 797 PNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDS-LKLLGNKSLAFSMLREYLEAVSN 855
            ++RQ+   GC  L TL    K     S++  CL S ++     + +   +R+YL+    
Sbjct: 798 SSLRQIEAYGCPLLETLSSDAKH-PLWSSLHNCLKSRIQDFECPTDSEDWIRKYLD---- 852

Query: 856 TRQHLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAI 901
               + VV+PGS  IPEW  +++ G  IT+  P N Y     +G+A+
Sbjct: 853 ----VQVVIPGSRGIPEWISHKSMGHEITIDLPKNWYEDNNFLGFAL 895


>gi|357474671|ref|XP_003607620.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508675|gb|AES89817.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1381

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 261/647 (40%), Positives = 393/647 (60%), Gaps = 29/647 (4%)

Query: 11   LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQR 70
            L+DS   DVR++GICGMGG+GKTT+   +   ISH F+   F+D++  I    G +  Q+
Sbjct: 521  LLDS-VDDVRVVGICGMGGIGKTTLTTALCGRISHRFDVRCFIDDLSRIYRHDGPIGAQK 579

Query: 71   QLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGS 130
            Q+L Q L      I+N++D  +++ SRL+R + L+++D+V  V+QL  LA NRE  G+GS
Sbjct: 580  QILHQTLGGEHFQIYNLYDTTNLIQSRLRRLRALIIVDNVDKVEQLDKLAVNRECLGAGS 639

Query: 131  RIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYA 190
            RI+I SRDEH+LK +GVD VYK   LN   +LQLF  KAFK    +    +L+  I+ YA
Sbjct: 640  RIVIISRDEHILKEYGVDVVYKVPLLNGTNSLQLFCQKAFKLDHIMSSFDKLTFDILSYA 699

Query: 191  GGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIA 250
             GLPLA++VLGSFL GR + EW+S L RL   P  +I+D++++SF+GL++LEK+IFLDIA
Sbjct: 700  NGLPLAIKVLGSFLFGRDIYEWKSALARLSKSPNKDIMDVMRLSFEGLEKLEKEIFLDIA 759

Query: 251  CFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELGQQIVQRQ 309
            CFF  + + YV   L  CGFH  IG+RVLI+K L+++   N + MH LL+ELG++IVQ +
Sbjct: 760  CFFIQSKKIYVQKVLNCCGFHADIGLRVLIDKSLLSISEENNIEMHSLLKELGREIVQEK 819

Query: 310  SPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLR 369
            S ++  + SR+W  E++ +++ E+   + VE I       ENE  +    +A SKM++LR
Sbjct: 820  SIKDSRRWSRVWLHEQLHNIMLENVEMK-VEAIYFPCDIDENETEILIMGEALSKMSHLR 878

Query: 370  LLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIK 429
            LL +  ++    L  LSN LR + W  YP K+LP+  Q ++ +E+ M +S + +LWK  K
Sbjct: 879  LLILKEVKFAGNLGCLSNELRYVEWGRYPFKYLPACFQPNQLVELIMRHSSVKQLWKDKK 938

Query: 430  HLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDC 489
            +L  LK++ LSHS+NL ++PDF   PNLE+L L+GC +L +I PS+ +  KL+ + +KDC
Sbjct: 939  YLPNLKILDLSHSKNLRKVPDFGEMPNLEELNLKGCIKLVQIDPSIGVLRKLVFMKLKDC 998

Query: 490  TSLITLPGKIL-MKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSE 548
             +L+++P  IL + SL+ LNL       +  + L   D S         +I+ H +  + 
Sbjct: 999  KNLVSIPNNILGLSSLKYLNLSGCSKVFNNPRHLKKFDSS---------DILFHSQSTTS 1049

Query: 549  LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
              L+ T I    L  E+L+        +C    +LP  +S + CL  + +S C  L   P
Sbjct: 1050 -SLKWTTIGLHSLYHEVLT--------SC----LLPSFLS-IYCLSEVDISFCG-LSYLP 1094

Query: 609  EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
            + +  +  L  L + G +   +PS  E L+KL  LNL  CK L  LP
Sbjct: 1095 DAIGCLLRLERLNIGGNNFVTLPSLRE-LSKLVYLNLEHCKLLESLP 1140



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 137/435 (31%), Positives = 209/435 (48%), Gaps = 38/435 (8%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
            L+ L LS    L+K P+    M +L EL L G   + ++  SI +L KL  + L DCKNL
Sbjct: 943  LKILDLSHSKNLRKVPDF-GEMPNLEELNLKGCIKLVQIDPSIGVLRKLVFMKLKDCKNL 1001

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPIN 711
            V +P++I+ L SLK LNLSGC K+ N P  L + +S + L     +   S  W + I ++
Sbjct: 1002 VSIPNNILGLSSLKYLNLSGCSKVFNNPRHLKKFDSSDIL-FHSQSTTSSLKWTT-IGLH 1059

Query: 712  LMRKSVALK--LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLP 769
             +   V     LPS   +  L +++++ C L    LP  IG L  L+ L +  N+FV+LP
Sbjct: 1060 SLYHEVLTSCLLPSFLSIYCLSEVDISFCGL--SYLPDAIGCLLRLERLNIGGNNFVTLP 1117

Query: 770  TSITHLSKLLNIELEDCKRLQSLPQLP--PNIRQVRVNGCASLVTLLDALKLCKSDSTMI 827
             S+  LSKL+ + LE CK L+SLPQLP       +        + + +  KL +S+    
Sbjct: 1118 -SLRELSKLVYLNLEHCKLLESLPQLPFPTAFEHMTTYKRTVGLVIFNCPKLGESEDC-- 1174

Query: 828  ACLDSLKLLGNKSLAFSMLREYLEAVSNTRQH-----LSVVVPGSEIPEWFMYQNEGSSI 882
                        S+AFS + + ++A            + +V+PGSEIP WF  Q+EG SI
Sbjct: 1175 -----------NSMAFSWMIQLIQARQQPSTFSYEDIIKIVIPGSEIPIWFNNQSEGDSI 1223

Query: 883  TVTRPSNL-YNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQL-----NCHIGHGIY-- 934
             +     +  N    +G A C VF V             P  +L     N H+   I   
Sbjct: 1224 RMDLSQIMDNNDNDFIGIACCAVFSVAPVDPTTTTCARRPKIELRFSNSNSHLFSFIIIP 1283

Query: 935  GIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVK 994
             I  RD      S+H+ L+Y  +++ +DI   ++  L   +  ++  S     G  LEV+
Sbjct: 1284 VILERDHI-VVKSNHMCLMYFPQKSLFDILKWIDGTLTHLDDINMKASIMKGQGLDLEVQ 1342

Query: 995  MCGLHPVYMDEVEEL 1009
             CG H VY  +++EL
Sbjct: 1343 NCGYHWVYKPDLQEL 1357



 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 101/206 (49%), Gaps = 56/206 (27%)

Query: 1   MDSRCEKL--RFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE 58
           MDS  E+L    L+DS   DVR++G+CGMGG+GK  IA  +Y+ I H+F     +D++R+
Sbjct: 124 MDSLTEELEKHLLLDS-VDDVRVVGVCGMGGIGKKAIATALYNKIFHQFPVLFLIDDLRK 182

Query: 59  ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
           I    G +SL  + L                                             
Sbjct: 183 IYRHDGPISLSHEWLC-------------------------------------------- 198

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            AG+        RIIIT RDEH+LK   VD VYK   LN  ++LQL + KAFK    +  
Sbjct: 199 -AGS--------RIIITFRDEHILKVFVVDVVYKVPLLNGTDSLQLLSRKAFKIDHLMSS 249

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFL 204
             +L++ I+ YA GLPLA++VLGSFL
Sbjct: 250 YDKLASDILWYANGLPLAIKVLGSFL 275


>gi|359493343|ref|XP_002277693.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1140

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 278/691 (40%), Positives = 404/691 (58%), Gaps = 58/691 (8%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQ 75
           S+ V M+GI GMGG+GKTT+ARV+Y+ +  +FE   FL  ++  S    + +L+ +LLS+
Sbjct: 266 STKVLMVGIWGMGGIGKTTLARVIYERVLCQFEGYCFLAGLKSTS----MDNLKAELLSK 321

Query: 76  LLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIIT 135
           +L   D    N+  G+  + +RL  KKVL+VIDDV     L++L G  +WFG  SR+IIT
Sbjct: 322 VL--GDK---NINMGLTSIKARLHSKKVLVVIDDVNHQSMLETLVGGHDWFGPQSRVIIT 376

Query: 136 SRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPL 195
           +RD+HLL   GVD VY+   L  D A+QLF+  AFK   P ++ ++L  +I  YA GLPL
Sbjct: 377 TRDKHLLTVQGVDAVYEVQKLEDDNAIQLFSYYAFKNKPPTRDVMKLLDQITSYAQGLPL 436

Query: 196 ALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKG 255
           AL+VLG  L  R+ D W   L +L+     EI ++LQISFDGL++ EK+IFLDIACFF+G
Sbjct: 437 ALKVLGCSLCDRNADYWTDKLNQLKKISNGEIQEVLQISFDGLEDNEKEIFLDIACFFRG 496

Query: 256 NDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELGQQIVQRQSPEEL 314
             + +V   LE CGF  V GI  LI+K LIT+  ++ L MHDLLQE+G QI+++ SP+E 
Sbjct: 497 RGQTFVKKILESCGFSMVSGIENLIDKSLITITQDDRLEMHDLLQEVGWQIIRKTSPKEP 556

Query: 315 GKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI- 373
           G+RSRLW++++V H+L   TG + VEGI  D    E   +   + KAFS+MTNLRLL+I 
Sbjct: 557 GRRSRLWEQKDVSHILKRETGAQEVEGIFFDLSGLEEMNF---TTKAFSQMTNLRLLEIY 613

Query: 374 ------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR- 420
                       C L + +  ++  + LR L W  YP + LP + + +  +   M  SR 
Sbjct: 614 RSNLRDTGGKMQCKLHVSDDFKFHYDELRYLHWDEYPCESLPFDFESENLVHFCMPRSRH 673

Query: 421 IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
           + +LWKG K    L+ + +S+S+ L   PDF+ A NLE L+L+GCT L ++HPSL   +K
Sbjct: 674 LTQLWKGQKVFGNLEFVDVSYSQYLKETPDFSRATNLEVLVLKGCTNLRKVHPSLGYLSK 733

Query: 481 LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
           LI+LN+++CT+L  LP                  +I  L  L TL +SG  K  + PE+ 
Sbjct: 734 LILLNLENCTNLEHLP------------------SIRWLVSLETLILSGCSKLEKLPEVP 775

Query: 541 EHMEHLSELHLEGTAIRGLPLSIEL------LSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
           +HM +LS+L L+GTAI       EL         L  LN  N     I  +  S++  LR
Sbjct: 776 QHMPYLSKLCLDGTAITDFSGWSELGNFQENSGNLDCLNELNSDDSTIRQLPSSSV-VLR 834

Query: 595 SLKLSGCSKLKKFPEIVR--SMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV 652
           +   S  S  ++   I    ++  L+ L L GTSI  +P ++E L  L+ L L++C+ L 
Sbjct: 835 NHNASPSSAPRRSHSIRPHCTLTSLTYLNLSGTSIIRLPWNLERLFMLQRLELTNCRRLQ 894

Query: 653 RLPSSIIALKSLKTLNLSGCFKLENV-PETL 682
            LP   +   S++ +N S C  LE V P+++
Sbjct: 895 ALP---VLPSSIERMNASNCTSLELVSPQSV 922



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 154/518 (29%), Positives = 221/518 (42%), Gaps = 59/518 (11%)

Query: 517  SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
            +G K    L VS D KF        H + L  LH +      LP   E    LV   +  
Sbjct: 620  TGGKMQCKLHVSDDFKF--------HYDELRYLHWDEYPCESLPFDFES-ENLVHFCMPR 670

Query: 577  CRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIE 635
             R L  L         L  + +S    LK+ P+  R+  +L  L L G T++++V  S+ 
Sbjct: 671  SRHLTQLWKGQKVFGNLEFVDVSYSQYLKETPDFSRAT-NLEVLVLKGCTNLRKVHPSLG 729

Query: 636  LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
             L+KL LLNL +C NL  LPS I  L SL+TL LSGC KLE +PE    +  L +L + G
Sbjct: 730  YLSKLILLNLENCTNLEHLPS-IRWLVSLETLILSGCSKLEKLPEVPQHMPYLSKLCLDG 788

Query: 696  TAVPHSTSWYSYIPINLMRKSVALK-LPSL-SGLCSLRKLNLTDCNLM-EGALPSDIG-- 750
            TA+   + W      N    S  L  L  L S   ++R+L  +   L    A PS     
Sbjct: 789  TAITDFSGWSEL--GNFQENSGNLDCLNELNSDDSTIRQLPSSSVVLRNHNASPSSAPRR 846

Query: 751  --------NLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
                     L SL  L LS  S + LP ++  L  L  +EL +C+RLQ+LP LP +I ++
Sbjct: 847  SHSIRPHCTLTSLTYLNLSGTSIIRLPWNLERLFMLQRLELTNCRRLQALPVLPSSIERM 906

Query: 803  RVNGCASL--------------VTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLRE 848
              + C SL                  +  KL    S M   + S   + +  +  +    
Sbjct: 907  NASNCTSLELVSPQSVFKRFGGFLFGNCFKLRNCHSKMEHDVQS---VASHVVPGAWRST 963

Query: 849  YLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVL 908
            Y     N     S V PGSEIP+WF + ++G  I +  P + Y     +G+A+  V    
Sbjct: 964  YASWHPNVGIPFSTVFPGSEIPDWFRHHSQGHEINIEVPPDWYINSNFLGFALSAVMAPQ 1023

Query: 909  KNSRGNNCFGSYPTHQL--NCHIGHGIYG-IGFRDKFGQAGSDHLWLLYLSRQTCYDIRL 965
             +SR    +    TH L  N H     +G   ++ +     SDH+WL Y          +
Sbjct: 1024 HDSRAWYMYCDLDTHDLNSNSHRICSFFGSWTYQLQHTPIESDHVWLAY----------V 1073

Query: 966  PLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYM 1003
            P   +    + +H+  SF      G  VK CG  PVY+
Sbjct: 1074 PSFLSFSCEKWSHIKFSFSS--SGGCVVKSCGFCPVYI 1109


>gi|359477827|ref|XP_002282884.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1408

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 273/659 (41%), Positives = 394/659 (59%), Gaps = 51/659 (7%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EKL+ LM++  + V ++GI G+GG+GKTTIA+ +Y+ ISH+++ S FL N++E  SKG +
Sbjct: 204 EKLKSLMNTELNMVSVVGIYGIGGVGKTTIAKAIYNEISHQYDGSSFLINIKE-RSKGDI 262

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
           + LQ++LL  +L+  +  I NV +GI M+   L   +VL++ DDV ++KQL+ LA  ++W
Sbjct: 263 LQLQQELLHGILRGKNFKINNVDEGISMIKRCLSSNRVLVIFDDVDELKQLEYLAEEKDW 322

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSAR 185
           F + S IIITSRD+H+L  +G D  Y+   LN +EA++LF++ AFK  +P +    LS  
Sbjct: 323 FRAKSTIIITSRDKHVLAQYGADIRYEVSKLNKEEAIELFSLWAFKQNRPQEVYKNLSYN 382

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           II YA GLPLAL+VLG+ L G+ +  W S L +L+I P  EI ++L+ISFDGL +++K I
Sbjct: 383 IIDYANGLPLALKVLGASLFGKKISNWESALCKLKIMPHMEIHNVLRISFDGLDDIDKGI 442

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQI 305
           FLD+ACFFKG+DRD+V+  L   G H    I  L ++CLITV  N L MHDL+Q++G +I
Sbjct: 443 FLDVACFFKGDDRDFVSRIL---GPHAKHAITTLDDRCLITVSKNMLDMHDLIQQMGWEI 499

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKM 365
           ++++ PE+ G+RSRL  +    HVLT + GT  +EG+ LD     N   L  + ++F +M
Sbjct: 500 IRQECPEDPGRRSRLC-DSNAYHVLTGNKGTRAIEGLFLDRCKF-NPSEL--TTESFKEM 555

Query: 366 TNLRLLKICNLQ--------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
             LRLLKI N +        LP   E+ S  L  L W GYPL+ LP N      +E+ + 
Sbjct: 556 NRLRLLKIHNPRRKLFLKDHLPRDFEFYSYELAYLHWDGYPLESLPMNFHAKNLVELSLR 615

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
            S I ++W+G K  DKL+V+ LSHS +LIR+PDF+  PNLE L LEGCT +         
Sbjct: 616 DSNIKQVWRGNKLHDKLRVIDLSHSVHLIRIPDFSSVPNLEILTLEGCTTV--------- 666

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
                   +K C                 +NL+ LP  I   K L TL  +G  K   FP
Sbjct: 667 --------LKRC-----------------VNLELLPRGIYKWKHLQTLSCNGCSKLERFP 701

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
           EI   M  L  L L GTAI  LP SI  L+GL  L L+ C  L  +P  + +L  L+ L 
Sbjct: 702 EIKGDMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELD 761

Query: 598 LSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           L  C+ ++   P  +  +  L +L L+      +P++I  L++LE+LNLS C NL ++P
Sbjct: 762 LGHCNIMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTINQLSRLEVLNLSHCNNLEQIP 820



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/229 (40%), Positives = 134/229 (58%), Gaps = 26/229 (11%)

Query: 551  LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI 610
             +G+ +  +P+ IE    L  L L++CR+L  LP ++   K L +L  SGCS+L+ FPEI
Sbjct: 1101 FKGSDMNEVPI-IENPLELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEI 1159

Query: 611  VRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLS 670
            ++ M+ L +L+L+GT+IKE+PSSI+ L  L+ L L +CKNLV LP SI  L S KTL +S
Sbjct: 1160 LQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVS 1219

Query: 671  GCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSL 730
             C     +P+ LG+++SLE L +                      S+  +LPSLSGLCSL
Sbjct: 1220 RCPNFNKLPDNLGRLQSLEYLFVGHL------------------DSMNFQLPSLSGLCSL 1261

Query: 731  RKLNLTDCNLMEGALPSDIGNLCSL-KELYLSKNSFVS----LPTSITH 774
            R L L  CNL E   PS+I  L SL +E   +  +F++    +P  I+H
Sbjct: 1262 RTLKLQGCNLRE--FPSEIYYLSSLGREFRKTLITFIAESNGIPEWISH 1308



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 182/366 (49%), Gaps = 38/366 (10%)

Query: 546 LSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
           L+ LH +G  +  LP++      LV L+L++    ++      + K LR + LS    L 
Sbjct: 587 LAYLHWDGYPLESLPMNFHA-KNLVELSLRDSNIKQVWRGNKLHDK-LRVIDLSHSVHLI 644

Query: 606 KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLK 665
           + P+   S+ +L  L L+G +                  L  C NL  LP  I   K L+
Sbjct: 645 RIPDF-SSVPNLEILTLEGCTTV----------------LKRCVNLELLPRGIYKWKHLQ 687

Query: 666 TLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYIPINLMRKSVAL-KL 721
           TL+ +GC KLE  PE  G +  L  LD+SGTA+   P S +  + +   L+++ + L ++
Sbjct: 688 TLSCNGCSKLERFPEIKGDMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQI 747

Query: 722 PS-LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLN 780
           P+ +  L SL++L+L  CN+MEG +PSDI +L SL++L L +  F S+PT+I  LS+L  
Sbjct: 748 PNHICHLSSLKELDLGHCNIMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTINQLSRLEV 807

Query: 781 IELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKS 840
           + L  C  L+ +P+LP  +R +  +G     +    L L     +++ C    + L   S
Sbjct: 808 LNLSHCNNLEQIPELPSRLRLLDAHGSNRTSSRALFLPL----HSLVNCFSWAQGLKRTS 863

Query: 841 LAFSMLREYLEAVSNTRQHLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGY 899
            + S  R          +   +V+P ++ IPEW M + +        P N +   + +G+
Sbjct: 864 FSDSSYRG---------KGTCIVLPRTDGIPEWIMDRTKRYFTETELPQNWHQNNEFLGF 914

Query: 900 AICCVF 905
           A+CCV+
Sbjct: 915 ALCCVY 920



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 93/160 (58%), Gaps = 6/160 (3%)

Query: 508  NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
            NL SLP++I G K L+TL  SG  +   FPEI++ ME L +L+L GTAI+ +P SI+ L 
Sbjct: 1128 NLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLR 1187

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF---LDG 624
            GL  L L+NC++L  LP ++ NL   ++L +S C    K P+ +  ++ L  LF   LD 
Sbjct: 1188 GLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEYLFVGHLDS 1247

Query: 625  TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSL 664
             +  ++P S+  L  L  L L  C NL   PS I  L SL
Sbjct: 1248 MNF-QLP-SLSGLCSLRTLKLQGC-NLREFPSEIYYLSSL 1284



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 25/206 (12%)

Query: 723  SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIE 782
            S+ G  SL  L+ + C+ +E + P  + ++ SL++LYL+  +   +P+SI  L  L  + 
Sbjct: 1135 SIFGFKSLATLSCSGCSQLE-SFPEILQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLL 1193

Query: 783  LEDCKRLQSLPQLPPNIRQVR---VNGCASLVTLLDALKLCKS-DSTMIACLDS------ 832
            L +CK L +LP+   N+   +   V+ C +   L D L   +S +   +  LDS      
Sbjct: 1194 LRNCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEYLFVGHLDSMNFQLP 1253

Query: 833  ----------LKLLGNKSLAFSMLREYLEAVSNT--RQHLSVVVPGSEIPEWFMYQNEGS 880
                      LKL G     F     YL ++     +  ++ +   + IPEW  +Q  G 
Sbjct: 1254 SLSGLCSLRTLKLQGCNLREFPSEIYYLSSLGREFRKTLITFIAESNGIPEWISHQKSGF 1313

Query: 881  SITVTRPSNLYNKKKLVGYAIC--CV 904
             IT+  P + Y     +G+ +C  CV
Sbjct: 1314 KITMKLPWSWYENDDFLGFVLCSLCV 1339


>gi|193584700|gb|ACF19650.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
          Length = 1098

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/567 (42%), Positives = 355/567 (62%), Gaps = 24/567 (4%)

Query: 1   MDSRCEKLRFLMDSG-SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +DSR + +  L+D+  ++DV ++G+ GMGG+GKTT+A+ +Y+ I   FE   F+ N+RE+
Sbjct: 217 IDSRVQDMIQLLDTQQTNDVLLLGMWGMGGIGKTTVAKAIYNKIGRNFEGRSFIANIREV 276

Query: 60  SSKG-GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
             K  G V+LQ QL+  + K     I NV  GI +L  RL  K+VLLV+DDV  + QL +
Sbjct: 277 WGKDCGQVNLQEQLMYDIFKETTTKIQNVESGISILNGRLCHKRVLLVLDDVNKLDQLNA 336

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G+ +WF  GSRIIIT+RD+H+L+ + VD++Y    ++  E+L+LF+  AFK  +P ++
Sbjct: 337 LCGSCKWFAPGSRIIITTRDKHILRGNRVDKIYIMKEMDESESLELFSWHAFKQARPSKD 396

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             ++S  +++Y+G LPLALEVLGS+L  R V EW   LE+L+  P  ++   L+IS+DGL
Sbjct: 397 FSEISTNVVQYSGRLPLALEVLGSYLFDREVTEWICVLEKLKRIPNDQVHQKLKISYDGL 456

Query: 239 Q-ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHD 296
             + EK IFLDIACFF G DR+ V + L G GF   IGI VL+E+ L+TV + N L MHD
Sbjct: 457 NDDTEKSIFLDIACFFIGMDRNDVIHILNGSGFFAEIGISVLVERSLVTVDDKNKLGMHD 516

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL+++G++I++ +SP E  +RSRLW  ++V  VL+E TGT+ VEG+ L    H  + +  
Sbjct: 517 LLRDMGREIIREKSPMEPEERSRLWFHDDVLDVLSEHTGTKAVEGLTLKMPCHSAQRF-- 574

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            S K F  M  LRLL++  +QL    +Y+S  L+ L W G+PL+ +PSN      + I +
Sbjct: 575 -STKTFENMKKLRLLQLSGVQLDGDFKYISRNLKWLHWNGFPLRCIPSNFYQRNIVSIEL 633

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             S    +WK I+ +++LK++ LSHS +L + PDF+  PNLEKL+LE C RL ++  S+ 
Sbjct: 634 ENSNAKLVWKEIQRMEQLKILNLSHSHHLTQTPDFSYLPNLEKLVLEDCPRLSQVSHSIG 693

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
              K++++N+KDC SL                  SLP  I  LK L+TL +SG L   + 
Sbjct: 694 HLKKVVLINLKDCISLC-----------------SLPRNIYTLKTLNTLILSGCLMIDKL 736

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSI 563
            E +E ME L+ L    T I  +P S+
Sbjct: 737 EEDLEQMESLTTLIANNTGITKVPFSL 763



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 174/402 (43%), Gaps = 72/402 (17%)

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
           LS + + GD K+           +L  LH  G  +R +P +      +V + L+N  + +
Sbjct: 590 LSGVQLDGDFKYIS--------RNLKWLHWNGFPLRCIPSNF-YQRNIVSIELENSNA-K 639

Query: 582 ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKL 640
           ++   +  ++ L+ L LS    L + P+    + +L +L L D   + +V  SI  L K+
Sbjct: 640 LVWKEIQRMEQLKILNLSHSHHLTQTPDF-SYLPNLEKLVLEDCPRLSQVSHSIGHLKKV 698

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
            L+NL DC +L  LP +I  LK+L TL LSGC  ++ + E L Q+ESL  L  + T +  
Sbjct: 699 VLINLKDCISLCSLPRNIYTLKTLNTLILSGCLMIDKLEEDLEQMESLTTLIANNTGI-- 756

Query: 701 STSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
                + +P +L+R S ++   SL G     +             PS I +       ++
Sbjct: 757 -----TKVPFSLVR-SKSIGFISLCGYEGFSR----------DVFPSIIWS-------WM 793

Query: 761 SKNSFVSLPTSITHLSKLLNIELEDC------------KRLQSLP-------QLPPNIRQ 801
           S N+      + +H+S L+++E   C             +LQSL        QL  +  +
Sbjct: 794 SPNNLSPAFQTASHMSSLVSLEASTCIFHDLSSISIVLPKLQSLWLTCGSELQLSQDATR 853

Query: 802 V------------RVNGCASLVTLLDALKLCKSDSTMIACLDSLKLL----GNKSLAFSM 845
           +                  S V  +++L  C+S   +    +S+K L    G  SL  ++
Sbjct: 854 IVNALSVASSMELESTATTSQVPDVNSLIECRSQVKVSTTPNSMKSLLFQMGMNSLITNI 913

Query: 846 LREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRP 887
           L+E +       +H    +P    P+W  + +EGSS+    P
Sbjct: 914 LKERILQNLTIDEHGRFSLPCDNYPDWLAFNSEGSSVIFEVP 955


>gi|357468563|ref|XP_003604566.1| Disease resistance protein [Medicago truncatula]
 gi|355505621|gb|AES86763.1| Disease resistance protein [Medicago truncatula]
          Length = 1161

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/566 (42%), Positives = 350/566 (61%), Gaps = 23/566 (4%)

Query: 1   MDSRCEKLRFLMDSG-SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR + +  L+D+  S+DV ++G+ GMGG+GKTTIA+ +Y+ I   FE   FL N+RE+
Sbjct: 281 VESRVQDMIQLLDTQQSNDVLLLGMWGMGGIGKTTIAKAIYNKIGRNFEGRSFLANIREV 340

Query: 60  SSK-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
             +  G V LQ QL+  + K     I N+  G  +L  RL  K+VLLV+DDV  + QL +
Sbjct: 341 WEQVSGQVYLQEQLMYDIFKETTTKIQNIESGKSILKERLCHKRVLLVLDDVNKLDQLNA 400

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G+ +WF  GSRIIIT+RD+H+L+   VD++Y    ++  E+L+LF+  AFK   P  +
Sbjct: 401 LCGSCKWFAPGSRIIITTRDKHILRGDRVDKIYIMKEMDESESLELFSWHAFKQTSPRDD 460

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             ++S  +++Y+GGLPLALEVLGS+L  R V EW   LE+L+  P  ++   L+IS+DGL
Sbjct: 461 YSEISRNVVKYSGGLPLALEVLGSYLFDREVSEWICVLEKLKRIPNDQVHKKLKISYDGL 520

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDL 297
            + EK IFLDIACF  G DR+ V   L GCG    IGI VL+E+ L+TV + N L MHDL
Sbjct: 521 NDTEKSIFLDIACFLIGMDRNDVILILNGCGLFAEIGISVLVERSLVTVDDKNKLGMHDL 580

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           L+++G++I++ +SP E  +RSRLW  E+V  +L+E TGT+ VEG+ L       + +   
Sbjct: 581 LRDMGREIIREKSPMEPEERSRLWYHEDVIDILSEHTGTKAVEGLTLKLPGRSAQRF--- 637

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
           S +AF KM  LRLL++   QL    +YLS +LR L W G+PL  +PSN      + I + 
Sbjct: 638 STEAFKKMKKLRLLQLSGAQLDGDFKYLSKQLRWLHWNGFPLTCIPSNFYQRNIVSIELE 697

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
            S +  +WK ++ +++LK++ LSHS  L + PDF+  PNLEKL+L+ C RL E+  ++  
Sbjct: 698 NSNVKLVWKEMQRMEQLKILNLSHSHYLTQTPDFSYLPNLEKLVLKDCPRLSEVSHTIGH 757

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
             K++++N+KDCTS                 L +LP  I  LK L TL +SG L   +  
Sbjct: 758 LKKVLLINLKDCTS-----------------LSNLPRNIYSLKSLKTLILSGCLMIDKLE 800

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSI 563
           E +E ME L+ L    TAI  +P S+
Sbjct: 801 EELEQMESLTTLIANNTAITKVPFSV 826



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 172/397 (43%), Gaps = 59/397 (14%)

Query: 522  LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLP--------LSIELLSGLVLLN 573
            LS   + GD K+          + L  LH  G  +  +P        +SIEL +  V L 
Sbjct: 653  LSGAQLDGDFKYLS--------KQLRWLHWNGFPLTCIPSNFYQRNIVSIELENSNVKLV 704

Query: 574  LKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPS 632
             K  + +E L +          L LS    L + P+    + +L +L L D   + EV  
Sbjct: 705  WKEMQRMEQLKI----------LNLSHSHYLTQTPDF-SYLPNLEKLVLKDCPRLSEVSH 753

Query: 633  SIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD 692
            +I  L K+ L+NL DC +L  LP +I +LKSLKTL LSGC  ++ + E L Q+ESL  L 
Sbjct: 754  TIGHLKKVLLINLKDCTSLSNLPRNIYSLKSLKTLILSGCLMIDKLEEELEQMESLTTLI 813

Query: 693  ISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSG--------LCSLRKLNLTDCNLMEGA 744
             + TA+       + +P +++R S ++   SL G          S+    +   N +  A
Sbjct: 814  ANNTAI-------TKVPFSVVR-SKSIGFISLCGYEGFSRDVFPSIISSWMLPTNNLPPA 865

Query: 745  LPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRL---QSLPQLPPNIRQ 801
            + + +G + SL  L+ S +    L +  + L KL  + LE    L   Q   ++   +  
Sbjct: 866  VQTAVG-MSSLVSLHASNSISHDLSSIFSVLPKLQCLWLECGSELQLSQDTTRILNALSS 924

Query: 802  VRVNGCASLVTL--LDALKLCK--------SDSTMIACLDSLKL-LGNKSLAFSMLREYL 850
                G  S+ T   +  +K C          DS    C+ SL + +G   L  ++L+E +
Sbjct: 925  TNSKGLESIATTSQVSNVKTCSLMECCDQMQDSATKNCMKSLLIQMGTSCLISNILKERI 984

Query: 851  EAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRP 887
                      SV++P    P W  + ++G S+    P
Sbjct: 985  LQNLTVDGGGSVLLPCDNYPNWLSFNSKGYSVVFEVP 1021


>gi|126571551|gb|ABO21407.1| TMV resistance protein N [Nicotiana tabacum]
          Length = 1141

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 315/930 (33%), Positives = 481/930 (51%), Gaps = 135/930 (14%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLI------SHEFEASGFLD 54
            +D+  EK+  L+    +DVR++GI GMGG+GKTTIAR ++D +      S++F+ + FL 
Sbjct: 191  IDTHLEKIESLLGLEINDVRIMGIWGMGGVGKTTIARGMFDTLLGRRDSSYQFDGACFLK 250

Query: 55   NVREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
            +++E  +K G+ SLQ  LLS LL+   N   N  +G   + SRL+ KKVL+V+DD+ D  
Sbjct: 251  DIKE--NKHGMHSLQNILLSNLLREKANYN-NEEEGKHQMASRLRSKKVLIVLDDIDDKD 307

Query: 115  Q-LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY 173
              L+ LAG+ +WFG GSRII+T+RD++L++ + V  +Y+   L   E++QL N  AF   
Sbjct: 308  HYLEYLAGDLDWFGDGSRIIVTTRDKNLIEKNDV--IYEVSALPVHESIQLLNQYAFGKK 365

Query: 174  QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
             P +   +LS  ++ YA GLPLAL+V GS L    + EWRS +E+++    SEI++ L+I
Sbjct: 366  VPDEHFKKLSLEVVNYAKGLPLALKVWGSLLHNLRLTEWRSAMEQMKNNSNSEIVEKLKI 425

Query: 234  SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTL 292
            S+DGL+ +++++FLDIACF +G ++DY+   LE C      G+R+LI+K L+ +   N +
Sbjct: 426  SYDGLEPIQQEMFLDIACFLRGEEKDYILQILESCHIGVEYGLRILIDKSLVFISEYNQV 485

Query: 293  WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
             MHDL+Q++ + IV  Q  ++ G+RSRLW  EEV  V++ STGT  +E I + +Y     
Sbjct: 486  QMHDLIQDMAKYIVNFQ--KDPGERSRLWLAEEVEEVMSNSTGTMAMEAIWVSSYSST-- 541

Query: 353  VYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
              L  S +A   M  LR+  I      + +EYL + L       YP +  PS  ++   +
Sbjct: 542  --LRFSNEAMKNMKRLRIFNIGMSSTHDAIEYLPHNLCCFVCNNYPWESFPSIFELKMLV 599

Query: 413  EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
             + + ++ +  LW   KHL  L+ + LS S+ L+R PDFTG PNLE + L  C+ L E+H
Sbjct: 600  HLQLRHNSLPHLWTETKHLPSLRRLDLSWSKRLMRTPDFTGMPNLEYVDLYQCSNLEEVH 659

Query: 473  PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
             SL   +KLI L +  C SL   P         ++N++S          L  L V G  +
Sbjct: 660  HSLGCCSKLIQLILNGCKSLKKFP---------RVNVES----------LKYLTVQGCSR 700

Query: 533  FREFPEIVEHMEHLSELHLEGTAIRGLPLSIEL----LSGLVLLNLKNCRSLEILPVTVS 588
              + PEI   M+   ++H+ G+ IR LP SI      ++ L+  N+KN   L  LP ++ 
Sbjct: 701  LEKIPEIHGRMKPEIQIHMLGSGIRELPSSITQYQTHITKLLSWNMKN---LVALPSSIC 757

Query: 589  NLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDC 648
             LK L SL + GCSKL+  PE +  + +L  L    T I   PSSI  L KL +L     
Sbjct: 758  RLKSLVSLSVPGCSKLESLPEEIGDLDNLRVLDARDTLILRPPSSIVRLNKLIILMFGGF 817

Query: 649  KNLV--RLPSSIIALKSLKTLNLSGCFKLE-NVPETLGQIESLEELDISGTAVPHSTSWY 705
            K++V    P     L+SL+ L+L+ C  ++  +PE +G + SL++LD+S     H     
Sbjct: 818  KDVVNFEFPPVAEGLRSLEHLDLTCCNLIDGGLPEDIGSLSSLKKLDLSRNNFEH----- 872

Query: 706  SYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSF 765
              +P            PS++ L +LR L+L DC                           
Sbjct: 873  --LP------------PSIAQLGALRSLDLKDC--------------------------- 891

Query: 766  VSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDST 825
                                 +RL  LP+LPP + ++RV+ C        ALK      T
Sbjct: 892  ---------------------QRLTQLPELPPELSELRVD-CHM------ALKFIHDLVT 923

Query: 826  MIACLDSLKL--LGNKSLAFSMLREYLEAVSNTRQHLSV-------VVPGS----EIPEW 872
                L  LKL    N ++         + +S+ R  +S        V  G     +IP W
Sbjct: 924  KRKKLGRLKLDDAHNDTIYNLFAHALFQNISSMRHDISASDSLSLRVFTGQLYLVKIPSW 983

Query: 873  FMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
            F +Q   SS+ V  P N Y   K +G+A+C
Sbjct: 984  FHHQGWDSSVLVNLPGNWYIPDKFLGFAVC 1013


>gi|449447549|ref|XP_004141530.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
 gi|449481488|ref|XP_004156198.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1009

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 295/752 (39%), Positives = 422/752 (56%), Gaps = 77/752 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-I 59
           M+ R +K+  LM  G  D R IGI GMGG+GKTTIA+ V+  ++ EF  S  L+NV++ +
Sbjct: 198 MNLRLKKMNMLMGIGLDDKRFIGIWGMGGIGKTTIAKAVFKSVAREFHGSCILENVKKTL 257

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            + GGLVSLQ +LLS  L      I +  DG++M+   L  +KV +V+D V    Q++ L
Sbjct: 258 KNVGGLVSLQEKLLSDTLMRGKVQIKDG-DGVEMIKKNLGNQKVFVVLDGVDHFSQVKDL 316

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  EWFG GSRIIIT+RDE LL + GVD  Y     + +EALQLF  +AF    P +  
Sbjct: 317 AGGEEWFGCGSRIIITTRDEGLLLSLGVDIRYNVESFDDEEALQLFCHEAFGVKFPKKGY 376

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           + L    I YA GLPLA++ LG  L  R    W   + +L      ++ + L+IS+D L 
Sbjct: 377 LDLCMPFIEYAEGLPLAIKALGHSLHNRLFKSWEGAIRKLNNSLNRQVYENLKISYDALG 436

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIG--------------------IRVL 279
           + E++IFL IACF KG ++D V +           G                    ++ L
Sbjct: 437 KEERRIFLYIACFLKGQNKDQVIDTFVSFEIDAADGLLTRKNAADVLCIKETAADALKKL 496

Query: 280 IEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELV 339
            EK LIT+  + + MH+L Q+LGQ+I   +S     K SRLW  E++ H L    G E +
Sbjct: 497 QEKSLITMLYDKIEMHNLHQKLGQEIFHEESSR---KGSRLWHREDMNHALRHKQGVEAI 553

Query: 340 EGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPL 399
           E IVLD+  H  E +L  +AK FS MT L++L++ N+ L   LEYLSN+LRLL W GYP 
Sbjct: 554 ETIVLDSKEH-GESHL--NAKFFSAMTGLKVLRVHNVFLSGVLEYLSNKLRLLSWHGYPF 610

Query: 400 KFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEK 459
           + LPS+ +  + +E+ +  S I  +W+  + LDKLKV+ LS+S+ L++ PD +  PNLE+
Sbjct: 611 RNLPSDFKPSELLELNLQNSCIENIWRETEKLDKLKVINLSNSKFLLKTPDLSTVPNLER 670

Query: 460 LILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGL 519
           L+L GCTRL E+H S+     LI L++KDC S                 LKS+ + IS L
Sbjct: 671 LVLNGCTRLQELHQSVGTLKHLIFLDLKDCKS-----------------LKSICSNIS-L 712

Query: 520 KCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRS 579
           + L  L +SG  +   FPEIV +M+ + ELHL+GTAIR L +SI  L+ LVLL+L+ C++
Sbjct: 713 ESLKILILSGCSRLENFPEIVGNMKLVKELHLDGTAIRKLHVSIGKLTSLVLLDLRYCKN 772

Query: 580 LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTK 639
           L  LP  +  L  +  L L GCSKL K P+ + ++  L +L + GTSI  +P ++ LL  
Sbjct: 773 LRTLPNAIGCLTSIEHLALGGCSKLDKIPDSLGNISCLKKLDVSGTSISHIPFTLRLLKN 832

Query: 640 LELLNLSDCKNLVR------------------------LPSSIIALKSLKTLNLSGCFKL 675
           LE+LN   C+ L R                        L + +    S+K LN S C  +
Sbjct: 833 LEVLN---CEGLSRKLCYSLFLLWSTPRNNNSHSFGLWLITCLTNFSSVKVLNFSDCKLV 889

Query: 676 E-NVPETLGQIESLEELDISG---TAVPHSTS 703
           + ++P+ L  + SL  LD+S    T +PHS S
Sbjct: 890 DGDIPDDLSCLSSLHFLDLSRNLFTNLPHSLS 921



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/342 (35%), Positives = 192/342 (56%), Gaps = 29/342 (8%)

Query: 496 PGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-T 554
           P ++L  +L+   ++++      L  L  +++S      + P++   + +L  L L G T
Sbjct: 619 PSELLELNLQNSCIENIWRETEKLDKLKVINLSNSKFLLKTPDL-STVPNLERLVLNGCT 677

Query: 555 AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
            ++ L  S+  L  L+ L+LK+C+SL+ +   +S L+ L+ L LSGCS+L+ FPEIV +M
Sbjct: 678 RLQELHQSVGTLKHLIFLDLKDCKSLKSICSNIS-LESLKILILSGCSRLENFPEIVGNM 736

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
           K + EL LDGT+I+++  SI  LT L LL+L  CKNL  LP++I  L S++ L L GC K
Sbjct: 737 KLVKELHLDGTAIRKLHVSIGKLTSLVLLDLRYCKNLRTLPNAIGCLTSIEHLALGGCSK 796

Query: 675 LENVPETLGQIESLEELDISGTAVPH--------------------STSWYSYI-----P 709
           L+ +P++LG I  L++LD+SGT++ H                        YS       P
Sbjct: 797 LDKIPDSLGNISCLKKLDVSGTSISHIPFTLRLLKNLEVLNCEGLSRKLCYSLFLLWSTP 856

Query: 710 INLMRKSVALKLPS-LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSL 768
            N    S  L L + L+   S++ LN +DC L++G +P D+  L SL  L LS+N F +L
Sbjct: 857 RNNNSHSFGLWLITCLTNFSSVKVLNFSDCKLVDGDIPDDLSCLSSLHFLDLSRNLFTNL 916

Query: 769 PTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
           P S++ L  L  + L++C RL+SLP+ P ++  V    C SL
Sbjct: 917 PHSLSQLINLRCLVLDNCSRLRSLPKFPVSLLYVLARDCVSL 958


>gi|163914237|dbj|BAF95888.1| N-like protein [Nicotiana tabacum]
          Length = 1165

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 313/934 (33%), Positives = 483/934 (51%), Gaps = 135/934 (14%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLI------SHEFEASGFLD 54
            +D+  +K+  L++ G +DVR++GICGMGG+GKTTIAR ++D +      S++F+ + FL+
Sbjct: 195  IDTHLKKIESLLEIGINDVRVVGICGMGGVGKTTIARAMFDTLLVRRDSSYQFDGACFLE 254

Query: 55   NVREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
            +++E  +KG + SLQ  LLS+LL+       N  DG   + SRL+ KKVL+V+DD+ D  
Sbjct: 255  DIKE--NKGRINSLQNTLLSKLLR-EKAEYNNKEDGKHQMASRLRSKKVLIVLDDIDDKD 311

Query: 115  Q-LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY 173
              L+ LAG+ +WFG+GSRII+T+RD+HL++  G+  V     L   EA+QLFN  AF   
Sbjct: 312  HYLEYLAGDLDWFGNGSRIIVTTRDKHLIEKFGIHLVT---ALTGHEAIQLFNQYAFGKE 368

Query: 174  QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
               +   +LS  +++YA GLPLAL VLGS L  R +  W+S +E+++  P S+I++ L+I
Sbjct: 369  VSDEHFKKLSLEVVKYAKGLPLALRVLGSSLRNRGITVWKSAIEQMKNNPNSKIVENLKI 428

Query: 234  SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTL 292
            S+DGL+ +++++FLDIACFF+G ++  +   L+ C      G+ VLIE+ L+ +   + +
Sbjct: 429  SYDGLEPIQQEMFLDIACFFRGKEKGAIMQVLKSCDCGAEYGLDVLIERSLVFITKYSKI 488

Query: 293  WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
             MHDL+QE+G+ IV  Q  + LG+ SRLW  ++   ++  +TGT  +E I +  Y     
Sbjct: 489  EMHDLIQEMGRYIVNLQ--KNLGECSRLWLTKDFEEMMINNTGTMAMEAIWVSTYS---- 542

Query: 353  VYLCASAKAFSKMTNLRLLKICNLQLPN---------GLEYLSNRLRLLGWRGYPLKFLP 403
              L  S +A   M  LR+L I N    +          +EYLSN LR     GYP + LP
Sbjct: 543  -TLRISNEAMKNMKRLRILYIDNWTWSSDGSYITHDGSIEYLSNNLRWFVLPGYPRESLP 601

Query: 404  SNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
            S  +    + + +  + +  LW   KHL  L+ + LS S+ L+R PDFTG PNLE L L 
Sbjct: 602  STFEPKMLVHLKLSGNSLRYLWMETKHLPSLRRIDLSRSKRLMRTPDFTGMPNLEYLDLT 661

Query: 464  GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLS 523
             C+ L E+H SL    KLI L++ +C SL+  P  + ++SLE L          GL+   
Sbjct: 662  WCSNLEEVHHSLGCCRKLIRLDLYNCKSLMRFPC-VNVESLEYL----------GLEYCD 710

Query: 524  TLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLS-IELLSGLVLLNLKNCRSLEI 582
            +L+        +FPEI   M+   ++H+  + IR LP S  +  + +  L+L   R+L  
Sbjct: 711  SLE--------KFPEIHRRMKPEIQIHMGDSGIRELPSSYFQYQTHITKLDLSGIRNLVA 762

Query: 583  LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL 642
            LP ++  LK L  L + GC KL+  PE +  + +L EL    T I   PSSI  L KL++
Sbjct: 763  LPSSICRLKSLVRLNVWGCPKLESLPEEIGDLDNLEELDAKCTLISRPPSSIVRLNKLKI 822

Query: 643  LNLSDCKN---LVRLPSSIIALKSLKTLNLSGCFKLE-NVPETLGQIESLEELDISGTAV 698
            L+ S           P     L SL+ L+LS C  ++  +PE +G + SL+EL + G   
Sbjct: 823  LSFSSFGYDGVHFEFPPVAEGLHSLEHLDLSYCNLIDGGLPEDIGSLSSLKELCLDGNNF 882

Query: 699  PHSTSWYSYIPINLMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKE 757
             H                    LP S++ L +L+ L+L+DC                   
Sbjct: 883  EH--------------------LPRSIAQLGALQILDLSDC------------------- 903

Query: 758  LYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDAL 817
                                         KRL  LP+L P +  + V+   +L    D +
Sbjct: 904  -----------------------------KRLTQLPELHPGLNVLHVDCHMALKFFRDLV 934

Query: 818  K---------LCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSE 868
                      L  + +  I  L +  L  N S   S+  +   + S +    S+V P  +
Sbjct: 935  TKRKKLQRVGLDDAHNDSIYNLFAHALFQNIS---SLRHDIFASDSLSESVFSIVHPWKK 991

Query: 869  IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
            IP WF +Q   SS++   P N Y   K +G+A+C
Sbjct: 992  IPSWFHHQGRDSSVSANLPKNWYIPDKFLGFAVC 1025


>gi|296089437|emb|CBI39256.3| unnamed protein product [Vitis vinifera]
          Length = 1486

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 356/1059 (33%), Positives = 537/1059 (50%), Gaps = 171/1059 (16%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MD   E+L+ L++   +DV +IGI G+GG+GKTTIA+ +Y+ IS +FE S FL +VRE S
Sbjct: 54   MDYHLEQLKALINIELNDVCIIGIYGIGGIGKTTIAKAIYNEISCKFEGSSFLADVREQS 113

Query: 61   -SKGGLVSLQRQLLSQLL----KLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQ 115
                GL+ LQ QLL   L    K   +SI+     I     +L+ K+VL+++DDV   +Q
Sbjct: 114  KDNAGLLRLQNQLLDDTLAGTYKKKSSSIYGATHEIR---DKLRLKRVLVILDDVDGRRQ 170

Query: 116  LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP 175
            L  LAG  EWFGSGSRIIIT+R + L+   G ++ Y+P  LN +EA++LF++ AFK   P
Sbjct: 171  LDYLAGECEWFGSGSRIIITTRHKDLVAIDGANKSYEPRKLNDEEAIKLFSLYAFKQNVP 230

Query: 176  LQECVQLSARIIRYAGGLPLALEVLGSFLSG-RSVDEWRSTLERLEIEPPSEILDILQIS 234
             +    L    ++YA GLPLAL VLGS LS  R + EW S L +LE EP  EI ++L+ S
Sbjct: 231  RENYKNLCENAVKYAQGLPLALAVLGSTLSSKRGIREWESELRKLEKEPNREIYNVLRTS 290

Query: 235  FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
            FDGL  +E +IFLDIACFFKG DRD+V+  L+         I  L E+CLIT+ +N ++M
Sbjct: 291  FDGLSRVEGEIFLDIACFFKGKDRDFVSRILDDAEGE----ISNLCERCLITILDNKIYM 346

Query: 295  HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
            HDL+Q++G ++V+ +   E G++SRLW  ++V  VLT + GT+ +EG+ +D    + E+ 
Sbjct: 347  HDLIQQMGWEVVREKCQNEPGEQSRLWDLDDVSSVLTRNAGTKAIEGLFMD-MSAQQEIQ 405

Query: 355  LCASAKAFSKMTNLRLLKI------------------CNLQLPNGLEYLSNRLRLLGWRG 396
               + + F+KM  LRLLKI                    + LP  L+  S  LR L W G
Sbjct: 406  F--TTETFTKMNKLRLLKIHQDAKYDHIKEIDGDVHFPQVALPEDLKLPSFELRYLHWDG 463

Query: 397  YPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPN 456
            Y LK+LP N      +E+ +  S I +LW+G K L KLKV+ L+HS+ L+  P F+  PN
Sbjct: 464  YSLKYLPPNFHPKNLVELNLRCSNIKQLWEGNKVLKKLKVINLNHSQRLMEFPSFSMMPN 523

Query: 457  LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPG-KILMKSLEKLNLKSLPTT 515
            LE L LEGC  L  +   +     L  L+  DC+ L   P  K  MK+L+KL+L      
Sbjct: 524  LEILTLEGCISLKRLPMDIDRLQHLQTLSCHDCSKLEYFPEIKYTMKNLKKLDLY----- 578

Query: 516  ISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLP-LSIELLSGLVLLNL 574
                                                 GTAI  LP  SIE L GL  LNL
Sbjct: 579  -------------------------------------GTAIEKLPSSSIEHLEGLEYLNL 601

Query: 575  KNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSI 634
             +C++L ILP  + +L+ L+ L ++ CSKL +  E + S++ L EL+L G    E+P ++
Sbjct: 602  AHCKNLVILPENICSLRFLKFLNVNACSKLHRLMESLESLQCLEELYL-GWLNCELP-TL 659

Query: 635  ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
              L+ L +L+L+      R+  S   L  L+ L+LS C  +E   + +  + SL+ELD+S
Sbjct: 660  SGLSSLRVLHLNGSCITPRVIRSHEFLSLLEELSLSDCEVMEGALDHIFHLSSLKELDLS 719

Query: 695  GTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCS 754
                             LM++ +   +  LS   SL+ L+L+  N+ +  +P+ I +L  
Sbjct: 720  NCY--------------LMKEGIPDDIYRLS---SLQALDLSGTNIHK--MPASIHHLSK 760

Query: 755  LKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVT-- 812
            LK L+L                         CK+LQ   +LP ++R   ++G  S  +  
Sbjct: 761  LKFLWLGH-----------------------CKQLQGSLKLPSSVR--FLDGHDSFKSLS 795

Query: 813  ----LLDALKLC-KSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGS 867
                L   L  C KS+   + C       G   + F     + + +S       +V+P  
Sbjct: 796  WQRWLWGFLFNCFKSEIQDVECRG-----GWHDIQFGQSGFFGKGIS-------IVIP-- 841

Query: 868  EIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPT--HQL 925
             +P W  YQN G+ I +  P + Y     +G+A+C V+  L+N+      G  PT  ++L
Sbjct: 842  RMPHWISYQNVGNEIKIELPMDWYEDNDFLGFALCAVYVPLENT-----LGDVPTMSYRL 896

Query: 926  NCHIGHGIYGIGFRDKFG----------QAGSDHLWLLYLSRQTCYDIRLPLESNLEPFE 975
            +CH+   + G  FRD                S+ +W+      TCY  ++ ++      +
Sbjct: 897  SCHL--SLCGDQFRDSLSFYSVCECYCRGESSNQVWM------TCYP-QIAIQEKHRSNK 947

Query: 976  SNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEELDQTTN 1014
                  SF  ++    +V  CG+  +Y  + + L    N
Sbjct: 948  WRQFAASFVGYVTGSFKVIKCGVTLIYEQKSKLLGSVEN 986



 Score =  206 bits (523), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 165/524 (31%), Positives = 260/524 (49%), Gaps = 69/524 (13%)

Query: 544  EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            EH  +L L  TAI  L L+IE LSG+  L L+NC+ LE LP  +  LK L +   SGCSK
Sbjct: 999  EHEEKLCLGETAINEL-LNIECLSGIQNLCLRNCKRLESLPSDIYKLKSLTTFSCSGCSK 1057

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
            L+ FPEI   MK L EL LDGTS+KE+PSSI+ L  L+ L+L +CKNL+ +P +I  L+S
Sbjct: 1058 LQSFPEITEDMKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNICNLRS 1117

Query: 664  LKTLNLSGCFKLENVPETLGQIESLE-----ELDISGTAVPHSTSWYSYIPINLMRKSV- 717
            L+TL +SGC KL  +P+ LG +  L       LD     +P  +       +NL R ++ 
Sbjct: 1118 LETLIVSGCSKLNKLPKNLGSLTQLRLLCAARLDSMSCQLPSFSDLRFLKILNLDRSNLV 1177

Query: 718  --ALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHL 775
              A++   +S L SL +++L+ CNL EG +PS+I  L SL+ LYL  N F S+P+ I  L
Sbjct: 1178 HGAIR-SDISILYSLEEVDLSYCNLAEGGIPSEICYLSSLQALYLKGNHFSSIPSGIGQL 1236

Query: 776  SKLLNIELEDCKRLQSLPQLPPNIRQVRVNGC--------ASLVTLLDALKLCKSDSTMI 827
            SKL  ++L  C+ LQ +P+LP ++R +  +GC           + L    K  KS+   +
Sbjct: 1237 SKLKILDLSHCEMLQQIPELPSSLRVLDAHGCIRLESLSSPQSLLLSSLFKCFKSEIQEL 1296

Query: 828  AC---LDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
             C   L SL L G           +   V+      S ++ G+    W    ++GS +T+
Sbjct: 1297 ECRMVLSSLLLQGF----------FYHGVNIVISESSGILEGT----W----HQGSQVTM 1338

Query: 885  TRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDK--- 941
              P N Y     +G+A+C  +  L N   +     YP     C +       G++ +   
Sbjct: 1339 ELPWNWYENNNFLGFALCSAYSSLDNESEDGDGDGYPC-TFKCCLTFWASESGWQCELPL 1397

Query: 942  ------FGQAG-SDHLWLLYLSRQTCYDIRLPLESNLEPFESNH--VNVSFEPWL-GQGL 991
                  +   G SD +W++Y  +             + P    H  ++ SF  ++ G+ +
Sbjct: 1398 KSRCTCYNDGGVSDQVWVMYYPKGA---------FRMNPVSVKHGSLSASFHGYIHGRAV 1448

Query: 992  EVKMCGLHPVYMDEVEELDQTTNQPSRFTVYNLNEFDQHFVGSK 1035
            +VK C +  ++        Q ++      +   +++ Q  +G++
Sbjct: 1449 KVKKCAVQFLF-------SQGSSVQDAHVIKGCSDYTQGIIGTR 1485



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/214 (37%), Positives = 116/214 (54%), Gaps = 30/214 (14%)

Query: 509  LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSG 568
            L+SLP+ I  LK L+T   SG  K + FPEI E M+ L EL L+GT+++ LP SI+ L G
Sbjct: 1034 LESLPSDIYKLKSLTTFSCSGCSKLQSFPEITEDMKILRELRLDGTSLKELPSSIQHLQG 1093

Query: 569  LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF---LDGT 625
            L  L+L+NC++L  +P  + NL+ L +L +SGCSKL K P+ + S+  L  L    LD  
Sbjct: 1094 LKYLDLENCKNLLNIPDNICNLRSLETLIVSGCSKLNKLPKNLGSLTQLRLLCAARLDSM 1153

Query: 626  SIK-----------------------EVPSSIELLTKLELLNLSDCKNLVR--LPSSIIA 660
            S +                        + S I +L  LE ++LS C NL    +PS I  
Sbjct: 1154 SCQLPSFSDLRFLKILNLDRSNLVHGAIRSDISILYSLEEVDLSYC-NLAEGGIPSEICY 1212

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
            L SL+ L L G     ++P  +GQ+  L+ LD+S
Sbjct: 1213 LSSLQALYLKG-NHFSSIPSGIGQLSKLKILDLS 1245



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 127/278 (45%), Gaps = 34/278 (12%)

Query: 350  ENEVYLCASAKAFSKMTNLRLLK-ICNLQLPNGLEYLSNRLRLLGWRGYPLKFLP----- 403
            E+E  LC    A +++ N+  L  I NL L N       RL  L    Y LK L      
Sbjct: 999  EHEEKLCLGETAINELLNIECLSGIQNLCLRN-----CKRLESLPSDIYKLKSLTTFSCS 1053

Query: 404  --SNLQ--------MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FT 452
              S LQ        M    E+ +  + + EL   I+HL  LK + L + +NL+ +PD   
Sbjct: 1054 GCSKLQSFPEITEDMKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNIC 1113

Query: 453  GAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSL-ITLPGKILMKSLEKLNLK- 510
               +LE LI+ GC++L ++  +L    +L +L      S+   LP    ++ L+ LNL  
Sbjct: 1114 NLRSLETLIVSGCSKLNKLPKNLGSLTQLRLLCAARLDSMSCQLPSFSDLRFLKILNLDR 1173

Query: 511  ------SLPTTISGLKCLSTLDVS-GDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSI 563
                  ++ + IS L  L  +D+S  +L     P  + ++  L  L+L+G     +P  I
Sbjct: 1174 SNLVHGAIRSDISILYSLEEVDLSYCNLAEGGIPSEICYLSSLQALYLKGNHFSSIPSGI 1233

Query: 564  ELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
              LS L +L+L +C  L+ +P   S+   LR L   GC
Sbjct: 1234 GQLSKLKILDLSHCEMLQQIPELPSS---LRVLDAHGC 1268


>gi|357468653|ref|XP_003604611.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
 gi|355505666|gb|AES86808.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
          Length = 1116

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 237/567 (41%), Positives = 353/567 (62%), Gaps = 24/567 (4%)

Query: 1   MDSRCEKLRFLMDSG-SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR + +  L+D+  S+ V ++G+ GMGG+GKTTIA+ +Y+ I  +F+   FL N+RE+
Sbjct: 244 VESRVQDMIQLLDTQLSNKVLLLGMWGMGGIGKTTIAKAIYNKIGRKFQGRSFLANIREV 303

Query: 60  SSKG-GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
             K  G V+LQ QL+  + K   + I N+  G  +L  RL  K+VL+V+DDV  + QL  
Sbjct: 304 WEKDYGQVNLQEQLMYDIFKETTSKIQNIEAGKYILKDRLCHKRVLIVLDDVNKLDQLNI 363

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G+R+WF  GSRIIIT+RD+H+L+   VD+ Y    ++  E+L+LF++ AFK   P ++
Sbjct: 364 LCGSRKWFAPGSRIIITTRDKHILRRDRVDKTYSMKEMDESESLELFSLHAFKQTSPTED 423

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             ++S  +++Y+GGLPLALEVLGS+L  R + EW   LE+L+I P  ++   L+IS+DGL
Sbjct: 424 FSEISRNVVKYSGGLPLALEVLGSYLFDREILEWICVLEKLKIIPNDQVHKKLKISYDGL 483

Query: 239 -QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHD 296
             + EK IFLDIACFF G DR+ V   L GCG    IGI VL+E+ L+TV   N L MHD
Sbjct: 484 NDDTEKSIFLDIACFFIGMDRNDVIQILNGCGLFAEIGISVLVERSLVTVDGKNKLGMHD 543

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL+++G++I++ +SP E  +RSRLW  E+V  VL+E TGT+ VEG+ L       + +  
Sbjct: 544 LLRDMGREIIREKSPMEPEERSRLWFHEDVLDVLSEHTGTKTVEGLTLKLPGRSAQRF-- 601

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            S KAF KM  LRLL++   QL    +YLS +LR L W G+PL  +PS  +    + I +
Sbjct: 602 -STKAFKKMKKLRLLQLSGAQLDGDFKYLSRKLRWLHWNGFPLTCIPSKFRQRNIVSIEL 660

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             S +  +W+ ++ +++LK++ LSHS  L + PDF+  PNLE L+L+ C RL E+  ++ 
Sbjct: 661 ENSNVKLVWQQMQRMEQLKILNLSHSHYLTQTPDFSYLPNLENLVLKDCPRLSEVSHTIG 720

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
              K++++N+KDC SL                  +LP  I  LK L TL +SG LK  + 
Sbjct: 721 HLKKVLLINLKDCISLC-----------------NLPRNIYTLKSLKTLILSGCLKIDKL 763

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSI 563
            E +E ME L+ L  + T I  +P S+
Sbjct: 764 EEDLEQMESLTTLMADNTGITKVPFSV 790



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 171/383 (44%), Gaps = 40/383 (10%)

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
           LS   + GD K+            L  LH  G  +  +P        +V + L+N  +++
Sbjct: 617 LSGAQLDGDFKYLS--------RKLRWLHWNGFPLTCIPSKFRQ-RNIVSIELENS-NVK 666

Query: 582 ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKL 640
           ++   +  ++ L+ L LS    L + P+    + +L  L L D   + EV  +I  L K+
Sbjct: 667 LVWQQMQRMEQLKILNLSHSHYLTQTPDF-SYLPNLENLVLKDCPRLSEVSHTIGHLKKV 725

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
            L+NL DC +L  LP +I  LKSLKTL LSGC K++ + E L Q+ESL  L    T +  
Sbjct: 726 LLINLKDCISLCNLPRNIYTLKSLKTLILSGCLKIDKLEEDLEQMESLTTLMADNTGI-- 783

Query: 701 STSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
                + +P +++ KS ++   SL G     + ++    +    +P++  N+    +  +
Sbjct: 784 -----TKVPFSVV-KSKSIGYISLCGYEGFSR-DVFPSIIWSWMVPTN--NVSPAVQTAV 834

Query: 761 SKNSFVSLPTSITH--LSKLLNIELEDCKRLQSLPQ---------LPPNIRQVRVNGCAS 809
             +  VSL  S     L KL  +  E    LQ L Q            N ++++     S
Sbjct: 835 GMSPHVSLNVSSVFKVLPKLQCLWFECGSELQ-LSQDTTRILNALCAANSKELKSTATTS 893

Query: 810 LVT-LLDALKLCKS---DSTMIACLDSLKL-LGNKSLAFSMLREYLEAVSNTRQHLSVVV 864
            V+ +  +L  C+S   DS    C+ SL + +G   L  ++L+E +          S ++
Sbjct: 894 QVSDVKTSLIECRSQVQDSPAKNCMKSLLIQMGTSCLISNILKERILQNVTVDGCGSFLL 953

Query: 865 PGSEIPEWFMYQNEGSSITVTRP 887
           P  + P W  + ++G S+    P
Sbjct: 954 PSDDYPNWLAFNSKGYSVNFEVP 976



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 77/149 (51%), Gaps = 7/149 (4%)

Query: 492 LITLPGKILMKS-----LEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHL 546
           L  +P K   ++     LE  N+K +   +  ++ L  L++S      + P+   ++ +L
Sbjct: 643 LTCIPSKFRQRNIVSIELENSNVKLVWQQMQRMEQLKILNLSHSHYLTQTPDF-SYLPNL 701

Query: 547 SELHLEGTA-IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
             L L+    +  +  +I  L  ++L+NLK+C SL  LP  +  LK L++L LSGC K+ 
Sbjct: 702 ENLVLKDCPRLSEVSHTIGHLKKVLLINLKDCISLCNLPRNIYTLKSLKTLILSGCLKID 761

Query: 606 KFPEIVRSMKDLSELFLDGTSIKEVPSSI 634
           K  E +  M+ L+ L  D T I +VP S+
Sbjct: 762 KLEEDLEQMESLTTLMADNTGITKVPFSV 790


>gi|147865361|emb|CAN84090.1| hypothetical protein VITISV_003077 [Vitis vinifera]
          Length = 1002

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 288/691 (41%), Positives = 403/691 (58%), Gaps = 79/691 (11%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD   EKL+ LM+   ++VR++GI G+GG+GKTTIA+ VY+ IS++F+ S FL+NVRE  
Sbjct: 200 MDFHLEKLKSLMNIELNEVRVVGIYGIGGIGKTTIAKAVYNDISYQFDGSSFLNNVRE-R 258

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           SK   + LQ++LL  +LK     + N+ +GI M+   L  K+VL+V DDV D+ Q+++LA
Sbjct: 259 SKDNALQLQQELLHGILKGKSXKVSNMDEGIQMIKRSLSSKRVLVVFDDVDDLMQIENLA 318

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
               WFG  SRIIIT+R +H L  +GV E Y+   L+  EA++LF+  AFK   P +   
Sbjct: 319 EEHSWFGPRSRIIITTRHKHFLTQYGVKESYEVXXLHDAEAIELFSWWAFKQNLPNEIYK 378

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            LS +++ YA GLPLAL VLGSFL  +++ EW S L +L+  P   I ++L+IS+DGL +
Sbjct: 379 NLSYQVVDYAKGLPLALXVLGSFLFKKTISEWESALCKLKTIPHMGIQNVLKISYDGLDD 438

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
           +EK IFLDIACFFKG D+D+V+  L+   F+   GI VL +KCLI++  N L MHDLLQ+
Sbjct: 439 VEKGIFLDIACFFKGKDKDFVSRMLDE-DFYAESGIGVLHDKCLISISGNKLDMHDLLQQ 497

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G +IV+++ P+E G+RSRLW++E++  VL  + G+E +EGI LD  H E+   L  + +
Sbjct: 498 MGWEIVRQECPKEPGRRSRLWEQEDIFDVLKRNMGSEKIEGIFLDLSHLED--ILDFTTE 555

Query: 361 AFSKMTNLRLLKI---------------------CNLQLPNGLEYLSNRLRLLGWRGYPL 399
           AF+ M  LRLLK+                     C ++  +  ++ S+ LR L W GY L
Sbjct: 556 AFAGMKKLRLLKVYNSKSILGDFGDTFTFNNKVNCRVRFAHEFKFCSDDLRYLYWHGYSL 615

Query: 400 KFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEK 459
           K LP +      +++ M YS I +LWKGIK L  LK M LSHS+ LI  PDF+G  NLE+
Sbjct: 616 KSLPKDFSPKHLVDLSMPYSHIKKLWKGIKVLKSLKSMDLSHSKCLIETPDFSGITNLER 675

Query: 460 LILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGL 519
           L+LEGC  L E+HPSL    KL  L++KDC                   L+ LP+ I   
Sbjct: 676 LVLEGCINLPEVHPSLGDLKKLNFLSLKDCKM-----------------LRRLPSRIWNF 718

Query: 520 KCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNC-- 577
           K L TL +SG  KF EFPE   ++E L ELH +GT +R LP S   +  L  L+ + C  
Sbjct: 719 KSLRTLILSGCSKFEEFPENFGNLEMLKELHEDGTVVRALPPSNFSMRNLKKLSFRGCGP 778

Query: 578 ---------RSLEILPVTV---SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT 625
                    RS   +  TV   SNL  L+ L LS C+                    DG 
Sbjct: 779 ASASWLWXKRSSNSICFTVPSSSNLCYLKKLDLSDCN------------------ISDGA 820

Query: 626 SIKEVPSSIELLTKLELLNLSDCKNLVRLPS 656
           ++     S+  L+ LE LNLS   N V LP+
Sbjct: 821 NL----GSLGFLSSLEDLNLSG-NNFVTLPN 846



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/211 (39%), Positives = 113/211 (53%), Gaps = 29/211 (13%)

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDC 648
           LK L+S+ LS    L + P+    + +L  L L+G  ++ EV  S+  L KL  L+L DC
Sbjct: 647 LKSLKSMDLSHSKCLIETPDF-SGITNLERLVLEGCINLPEVHPSLGDLKKLNFLSLKDC 705

Query: 649 KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---------- 698
           K L RLPS I   KSL+TL LSGC K E  PE  G +E L+EL   GT V          
Sbjct: 706 KMLRRLPSRIWNFKSLRTLILSGCSKFEEFPENFGNLEMLKELHEDGTVVRALPPSNFSM 765

Query: 699 ------------PHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALP 746
                       P S SW   +       S+   +PS S LC L+KL+L+DCN+ +GA  
Sbjct: 766 RNLKKLSFRGCGPASASW---LWXKRSSNSICFTVPSSSNLCYLKKLDLSDCNISDGANL 822

Query: 747 SDIGNLCSLKELYLSKNSFVSLP--TSITHL 775
             +G L SL++L LS N+FV+LP  + ++HL
Sbjct: 823 GSLGFLSSLEDLNLSGNNFVTLPNMSGLSHL 853



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 177/443 (39%), Gaps = 85/443 (19%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV 652
            LR L   G S LK  P+   S K L +L +  + IK++   I++L  L+ ++LS  K L+
Sbjct: 605  LRYLYWHGYS-LKSLPKDF-SPKHLVDLSMPYSHIKKLWKGIKVLKSLKSMDLSHSKCLI 662

Query: 653  RLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINL 712
              P     + +L+ L L GC  L  V  +LG ++ L  L +                  +
Sbjct: 663  ETPD-FSGITNLERLVLEGCINLPEVHPSLGDLKKLNFLSLKDC--------------KM 707

Query: 713  MRKSVALKLPS-LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTS 771
            +R+     LPS +    SLR L L+ C+  E   P + GNL  LKEL+       +LP S
Sbjct: 708  LRR-----LPSRIWNFKSLRTLILSGCSKFE-EFPENFGNLEMLKELHEDGTVVRALPPS 761

Query: 772  ITHLSKLLNIELEDCKRLQS---LPQLPPNIRQVRVNGCASLVTL--LDALKLCKSDST- 825
               +  L  +    C    +     +   N     V   ++L  L  LD      SD   
Sbjct: 762  NFSMRNLKKLSFRGCGPASASWLWXKRSSNSICFTVPSSSNLCYLKKLDLSDCNISDGAN 821

Query: 826  -----MIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGS 880
                  ++ L+ L L GN  +        +  +S+    ++ V+PGS IP+W  YQ+  +
Sbjct: 822  LGSLGFLSSLEDLNLSGNNFVTLPN----MSGLSHLDSDVAFVIPGSRIPDWIRYQSSEN 877

Query: 881  SITVTRPSNLYNKKKLVGYAICCVF-------HVLKN-----------SRGNNCFGSYPT 922
             I    P N       +G+A+  VF       H L             S    CF  +  
Sbjct: 878  VIEADLPLNW--STNCLGFALALVFSSQPPVSHWLWAEVFLDFGTCCCSIETQCF--FHL 933

Query: 923  HQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVS 982
               NC + H +              DH+ L Y          +P++ +L P +  H+  +
Sbjct: 934  EGDNCVLAHEV--------------DHVLLXY----------VPVQPSLSPHQVIHIKAT 969

Query: 983  FEPWLGQGLEVKMCGLHPVYMDE 1005
            F      G E+K CGL  VY++E
Sbjct: 970  FAITSETGYEIKRCGLGLVYVNE 992


>gi|451799084|gb|AGF69238.1| TMV resistance protein N-like protein 1 [Vitis labrusca]
          Length = 1514

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 269/660 (40%), Positives = 391/660 (59%), Gaps = 60/660 (9%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EKL+ LM++  + V ++GI G+GG+GKTTIA+ +Y+ ISH+++ S FL N++E  SKG +
Sbjct: 199 EKLKSLMNTELNMVSVVGIYGIGGVGKTTIAKAIYNEISHQYDGSSFLINIKE-RSKGDI 257

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
           + LQ++LL  +L+  +  I NV +GI M+   L   +VL++ DDV ++KQL+ LA  ++W
Sbjct: 258 LQLQQELLHGILRGKNFKINNVDEGISMIKRCLSSNRVLVIFDDVDELKQLEYLAEEKDW 317

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSAR 185
           F + S IIITSRD+H+L  +G D  Y+   LN +EA++LF++ AFK  +P +    LS  
Sbjct: 318 FRAKSTIIITSRDKHVLAQYGADIRYEVSKLNKEEAIELFSLWAFKQNRPQEVYKNLSYN 377

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           II YA GLPLAL+VLG+ L G+ +  W S L +L+I P  EI ++L+ISFDGL +++K I
Sbjct: 378 IIDYANGLPLALKVLGASLFGKKISNWESALCKLKIMPHMEIHNVLRISFDGLDDIDKGI 437

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQI 305
           FLD+ACFFKG+DRD+V+  L   G H    I  L ++CLITV  N L MHDL+Q++G +I
Sbjct: 438 FLDVACFFKGDDRDFVSRIL---GPHAKHAITTLDDRCLITVSKNMLDMHDLIQQMGWEI 494

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDN-YHHENEVYLCASAKAFSK 364
           ++++ PE+ G+RSRL  +    HVLT + GT  +EG+ LD    + +E+    + ++F +
Sbjct: 495 IRQECPEDPGRRSRLC-DSNAYHVLTGNKGTRAIEGLFLDRCKFNPSEL----TTESFKE 549

Query: 365 MTNLRLLKICNLQ--------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
           M  LRLLKI N +        LP   E+ S  L  L W GYPL+ LP N      +E+ +
Sbjct: 550 MNRLRLLKIHNPRRKLFLKDHLPRDFEFYSYELAYLHWDGYPLESLPMNFHAKNLVELSL 609

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             S I ++W+G K  DKL+V+ LSHS +LIR+PDF+  PNLE L LEGC           
Sbjct: 610 RDSNIKQVWRGNKLHDKLRVIDLSHSVHLIRIPDFSSVPNLEILTLEGC----------- 658

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
                                         +NL+ LP  I   K L TL  +G  K   F
Sbjct: 659 ------------------------------VNLELLPRGIYKWKHLQTLSCNGCSKLERF 688

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
           PEI   M  L  L L GTAI  LP SI  L+GL  L L+ C  L  +P  + +L  L+ L
Sbjct: 689 PEIKGDMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKEL 748

Query: 597 KLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
            L  C+ ++   P  +  +  L +L L+      +P++I  L++LE+LNLS C NL ++P
Sbjct: 749 DLGHCNIMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTINQLSRLEVLNLSHCNNLEQIP 808



 Score =  196 bits (499), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 157/482 (32%), Positives = 234/482 (48%), Gaps = 78/482 (16%)

Query: 551  LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI 610
             +G+ +  +P+ IE    L  L L++CR+L  LP ++   K L +L  SGCS+L+ FPEI
Sbjct: 1089 FKGSDMNEVPI-IENPLELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEI 1147

Query: 611  VRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLS 670
            ++ M+ L +L+L+GT+IKE+PSSI+ L  L+ L L +CKNLV LP SI  L S KTL +S
Sbjct: 1148 LQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVS 1207

Query: 671  GCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSL 730
             C     +P+ LG+++SLE L +                      S+  +LPSLSGLCSL
Sbjct: 1208 RCPNFNKLPDNLGRLQSLEYLFVGHL------------------DSMNFQLPSLSGLCSL 1249

Query: 731  RKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQ 790
            R L L  CNL E   PS+I  L SL  L L  N F  +P  I+ L  L N+ L  CK LQ
Sbjct: 1250 RTLKLQGCNLRE--FPSEIYYLSSLVTLSLGGNHFSRIPDGISQLYNLENLYLGHCKMLQ 1307

Query: 791  SLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYL 850
             +P+LP  +  +  + C SL  L     L    S++  C  S ++ G         RE+ 
Sbjct: 1308 HIPELPSGLFCLDAHHCTSLENLSSRSNLLW--SSLFKCFKS-QIQG---------REFR 1355

Query: 851  EAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLK- 909
            + +      ++ +   + IPEW  +Q  G  IT+  P + Y     +G+ +C +   L+ 
Sbjct: 1356 KTL------ITFIAESNGIPEWISHQKSGFKITMKLPWSWYENDDFLGFVLCSLCVPLEI 1409

Query: 910  NSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQ---TCYD---- 962
             ++ + CF        NC        + F D       D  +  Y S Q    CYD    
Sbjct: 1410 ETKKHRCF--------NC-------KLNFDD-------DSAYFSYQSFQFCEFCYDEDAS 1447

Query: 963  -----IRLPLESNLEPFESNH---VNVSFEPWLG-QGLEVKMCGLHPVYMDEVEELDQTT 1013
                 I  P     + + SN    +N  F  + G + ++V  CG H +Y  + E+ + T 
Sbjct: 1448 SQGCLIYYPKSRIPKRYHSNEWRTLNAFFNVYFGVKPVKVARCGFHFLYAHDYEQNNLTI 1507

Query: 1014 NQ 1015
             Q
Sbjct: 1508 VQ 1509



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 180/366 (49%), Gaps = 45/366 (12%)

Query: 546 LSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
           L+ LH +G  +  LP++      LV L+L++    ++      + K LR + LS    L 
Sbjct: 582 LAYLHWDGYPLESLPMNFHA-KNLVELSLRDSNIKQVWRGNKLHDK-LRVIDLSHSVHLI 639

Query: 606 KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLK 665
           + P+                    VP+       LE+L L  C NL  LP  I   K L+
Sbjct: 640 RIPDF-----------------SSVPN-------LEILTLEGCVNLELLPRGIYKWKHLQ 675

Query: 666 TLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYIPINLMRKSVAL-KL 721
           TL+ +GC KLE  PE  G +  L  LD+SGTA+   P S +  + +   L+++ + L ++
Sbjct: 676 TLSCNGCSKLERFPEIKGDMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQI 735

Query: 722 PS-LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLN 780
           P+ +  L SL++L+L  CN+MEG +PSDI +L SL++L L +  F S+PT+I  LS+L  
Sbjct: 736 PNHICHLSSLKELDLGHCNIMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTINQLSRLEV 795

Query: 781 IELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKS 840
           + L  C  L+ +P+LP  +R +  +G     +    L L     +++ C    + L   S
Sbjct: 796 LNLSHCNNLEQIPELPSRLRLLDAHGSNRTSSRALFLPL----HSLVNCFSWAQGLKRTS 851

Query: 841 LAFSMLREYLEAVSNTRQHLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGY 899
            + S  R          +   +V+P ++ IPEW M + +        P N +   + +G+
Sbjct: 852 FSDSSYRG---------KGTCIVLPRTDGIPEWIMDRTKRYFTETELPQNWHQNNEFLGF 902

Query: 900 AICCVF 905
           A+CCV+
Sbjct: 903 ALCCVY 908



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 108/187 (57%), Gaps = 7/187 (3%)

Query: 508  NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
            NL SLP++I G K L+TL  SG  +   FPEI++ ME L +L+L GTAI+ +P SI+ L 
Sbjct: 1116 NLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLR 1175

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF---LDG 624
            GL  L L+NC++L  LP ++ NL   ++L +S C    K P+ +  ++ L  LF   LD 
Sbjct: 1176 GLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEYLFVGHLDS 1235

Query: 625  TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQ 684
             +  ++P S+  L  L  L L  C NL   PS I  L SL TL+L G      +P+ + Q
Sbjct: 1236 MNF-QLP-SLSGLCSLRTLKLQGC-NLREFPSEIYYLSSLVTLSLGGN-HFSRIPDGISQ 1291

Query: 685  IESLEEL 691
            + +LE L
Sbjct: 1292 LYNLENL 1298



 Score = 48.5 bits (114), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 20/197 (10%)

Query: 399  LKFLPSNLQ-MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPN 456
            L+  P  LQ M+   ++Y+  + I E+   I+ L  L+ ++L + +NL+ +P+      +
Sbjct: 1141 LESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTS 1200

Query: 457  LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
             + L++  C             NKL   N+    SL  L     +  L+ +N + LP ++
Sbjct: 1201 FKTLVVSRCPNF----------NKLPD-NLGRLQSLEYL----FVGHLDSMNFQ-LP-SL 1243

Query: 517  SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
            SGL  L TL + G    REFP  + ++  L  L L G     +P  I  L  L  L L +
Sbjct: 1244 SGLCSLRTLKLQG-CNLREFPSEIYYLSSLVTLSLGGNHFSRIPDGISQLYNLENLYLGH 1302

Query: 577  CRSLEILPVTVSNLKCL 593
            C+ L+ +P   S L CL
Sbjct: 1303 CKMLQHIPELPSGLFCL 1319


>gi|224145341|ref|XP_002325608.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862483|gb|EEE99989.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1083

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 362/1059 (34%), Positives = 526/1059 (49%), Gaps = 153/1059 (14%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYD--LISHEFEASGFLDNVRE 58
            +D R  K+  L++  S DV ++GI GMGG+GKTTIA+ V D   I   F+   F  N R+
Sbjct: 13   IDVRVSKVESLLNMESPDVLIVGIWGMGGIGKTTIAKAVRDNMYIRSRFDRI-FYANFRQ 71

Query: 59   ISSKGGLVSLQRQLLSQLL---KLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQ 115
             S       L+R+ L QLL    L   S  + F     +  RL R K+L+V+DDV ++  
Sbjct: 72   KSD------LRRKFLKQLLGQETLGSLSFRDSF-----VRERLSRIKILIVLDDVHNLMH 120

Query: 116  LQS----LAGNREWFGSGSRIIITSRDEHLLKTHGVDE--VYKPHGLNYDEALQLFNMKA 169
            L+     L G    FG GS+++ITSRD+ +L  + VDE   YK   LNY+EA+QLF   A
Sbjct: 121  LEEWRDLLDGRNNSFGPGSKVLITSRDKQVL-NNVVDENKTYKVKELNYEEAIQLFRSNA 179

Query: 170  FKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILD 229
             K   P  + + +  +I R+  G PLAL+VLGS   G+S++ WRS L +L+      I D
Sbjct: 180  LKNCIPTIDQMHMIEQIPRHVQGNPLALKVLGSSFYGKSMEVWRSALNKLDQN--RNIKD 237

Query: 230  ILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIG-------------- 275
            +L+IS+DGL   ++ IFLDIA FF   + D  T  L+      VI               
Sbjct: 238  VLRISYDGLDSEQQSIFLDIAHFFINWNPDEATRILDCLHGRSVISDITTLIDNCLITNV 297

Query: 276  --------------------IRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELG 315
                                I  L+++CL+   + +L MHDLL+E+   IV+ +S    G
Sbjct: 298  DSSCDEWQLDCLYGRSVNFDIYTLLDQCLVNTSHISLEMHDLLREMAFNIVRAES-RFPG 356

Query: 316  KRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICN 375
            KRSRL    +V  VL E+ GTE +EGI LD      +++L   + AF+ M  LR L    
Sbjct: 357  KRSRLCHPPDVVQVLEENKGTEEIEGISLDMSKLSRQIHL--KSDAFAMMDGLRFLNFYG 414

Query: 376  LQL---------PNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWK 426
                        P GL+YL N+LR L W G+P K LP   + +  +E+++  S++ +LW 
Sbjct: 415  RPYSQDDKMHLPPPGLKYLPNKLRYLRWDGFPSKSLPLAFRAEHLVELHLRESKLVKLWT 474

Query: 427  GIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNM 486
            G+K +  L+ + LS S  L  +PD + A NL  L L+ C  L E+  SL   +KL  +N+
Sbjct: 475  GVKDVGNLRTIDLSKSSYLTELPDLSMAKNLVSLRLKDCPSLTEVPSSLQYLDKLEYINL 534

Query: 487  KDCTSLITLP---GKIL--------------------MKSLE--KLNLKSLPTTISGLKC 521
            + C +L + P    K+L                    MKSL     ++K +P +I+G   
Sbjct: 535  RCCYNLRSFPMLYSKVLRKLSIDQCLDLTTCPTISQNMKSLRLWGTSIKEVPQSITG--K 592

Query: 522  LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
            L  LD+ G  K  +FPE+   +E   EL L  TAI+ +P SI+ L+ L  L +  C  LE
Sbjct: 593  LKVLDLWGCSKMTKFPEVSGDIE---ELWLSETAIQEVPSSIQFLTRLRELEMNGCSKLE 649

Query: 582  ILPVTVSNLKCLR------SLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPS-SI 634
             LP     ++ L        L +SGCSKL+  P+I   M+ L EL L  T IKE+PS S 
Sbjct: 650  SLPEITVPMESLDLSQDSVILDMSGCSKLESLPQITVPMESLVELNLSKTGIKEIPSISF 709

Query: 635  ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
            + +T L++L L D   L  LPSSI  L  L++L++SGC KLE+ P+    +ESL EL+++
Sbjct: 710  KHMTSLKILKL-DGTPLKELPSSIQFLTRLQSLDMSGCSKLESFPQITVPMESLAELNLN 768

Query: 695  GTAVPHSTSWYSYIP-INLMRKSVALKLPSLSGLC----SLRKLNLTDCNLMEGALPSDI 749
            GT +    S   ++  +  +  S   KL S   +     SL +LNL+   + E  LP  I
Sbjct: 769  GTPLKELPSSIQFLTRLQSLDMSGCSKLESFPEITVPMESLAELNLSKTGIKE--LPLSI 826

Query: 750  GNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP-QLPPNIRQVRVNGCA 808
             ++  LK+L L       LP SI  +  L  + L     +++LP QLPP++R +R   C+
Sbjct: 827  KDMVCLKKLTLEGTPIKELPLSIKDMVCLEELTLHGTP-IKALPDQLPPSLRYLRTRDCS 885

Query: 809  SLVTLLDALKL----CKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVV 864
            SL T+   + +     + D T    +D   L+    L      E        R  + +V+
Sbjct: 886  SLETVPSIINIGRLQLRWDFTNCFKVDQKPLIEAMHLKIQSGEEI------PRGGIEMVI 939

Query: 865  PGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQ 924
            PGSEIPEWF  +  GSS+T+  PS   N+ +L G A C VF +             P+  
Sbjct: 940  PGSEIPEWFGDKGVGSSLTIQLPS---NRHQLKGIAFCLVFLL-----------PPPSQD 985

Query: 925  LNCHIGHGIYGIGFRD---------KFGQAGSDHLWLLY 954
            L C   H  Y  G  D         K G   SDH+ L Y
Sbjct: 986  LYCDY-HVKYKNGEHDAASRKVISYKLGTCDSDHMILQY 1023


>gi|359493402|ref|XP_002279700.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1186

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 312/900 (34%), Positives = 464/900 (51%), Gaps = 107/900 (11%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MD R ++L+ L+ S  +D R++GI G GG+GKTTIA++VY+ I ++F  + FL +VRE  
Sbjct: 197  MDFRLKELKSLLSSDLNDTRVVGIYGTGGIGKTTIAKIVYNEIQYQFTGASFLQDVRETF 256

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            +KG  + LQ+QLL   +   D    N+  GI+++  RL  KKVL+VIDDV  ++QL+S+A
Sbjct: 257  NKGCQLQLQQQLLHDTVG-NDEEFSNINKGINIIKDRLGSKKVLIVIDDVDRLQQLESVA 315

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            G+ +WFG GS IIIT+R++HLL  +GV   +K   L+Y+EALQLF+  AFK   P ++ V
Sbjct: 316  GSPKWFGPGSTIIITTRNQHLLVEYGVTISHKATELHYEEALQLFSQHAFKQNVPKEDYV 375

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
             LS  +++YA GLPLAL+VLGS L G ++DEW+S  ++L+  P  EI D L+ISFDGL  
Sbjct: 376  DLSNCMVQYAQGLPLALKVLGSSLQGMTIDEWKSASDKLKKNPMKEINDALRISFDGLDP 435

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             +K++FLDIACFFKG  +D+V+  L+GC       IRVL ++CL+T+ NN + MHDL+QE
Sbjct: 436  SQKEVFLDIACFFKGECKDFVSRILDGCNLFVTCNIRVLCDRCLVTILNNVIQMHDLIQE 495

Query: 301  LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            +G  I++ +   +  K SRLW  +++    ++    E ++GI L N              
Sbjct: 496  MGWAIIREECLGDPCKWSRLWDVDDIYDAFSKQERLEELKGIDLSNSKQ------LVKMP 549

Query: 361  AFSKMTNLRLLKI--C--------------NLQLPN--GLEYLSNRLRLLGWRGYPL--- 399
             FS M+NL  L +  C              +L   N  G E L + L  + +    +   
Sbjct: 550  KFSSMSNLERLNLEGCISLRELHPSIGDLKSLTYLNLGGCEQLRSFLSSMKFESLEVLYL 609

Query: 400  -------KFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFT 452
                   KF   +  M+   E+Y+  S I  L   I +L  L+V+ LS+  N  + P+  
Sbjct: 610  NCCPNLKKFPEIHGNMECLKELYLNKSGIQALPSSIVYLASLEVLNLSYCSNFKKFPEIH 669

Query: 453  GAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSL 512
            G     K +    + + E+  S++    L +LN+ DC+                 N +  
Sbjct: 670  GNMECLKELYFNRSGIQELPSSIVYLASLEVLNLSDCS-----------------NFEKF 712

Query: 513  PTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLL 572
            P     +K L  L +    KF +FP+   +M HL  LHL  + I+ LP SI  L  L +L
Sbjct: 713  PEIHGNMKFLRELYLERCSKFEKFPDTFTYMGHLRGLHLRESGIKELPSSIGYLESLEIL 772

Query: 573  NLKNCRSLEILPVTVSNLKC-----------------------LRSLKLSGCSKLKKFPE 609
            +L  C   E  P    N+KC                       L  L L  CSK +KF +
Sbjct: 773  DLSCCSKFEKFPEIQGNMKCLLNLFLDETAIKELPNSIGSLTSLEMLSLRECSKFEKFSD 832

Query: 610  IVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVR---------------- 653
            +  +M  L EL L G+ IKE+P SI  L  LE LNL  C N  +                
Sbjct: 833  VFTNMGRLRELCLYGSGIKELPGSIGYLESLEELNLRYCSNFEKFPEIQGNMKCLKMLCL 892

Query: 654  -------LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTS 703
                   LP+ I  L++L+ L+LSGC  LE  PE    + +L  L +  TA+   P+S  
Sbjct: 893  EDTAIKELPNGIGRLQALEILDLSGCSNLERFPEIQKNMGNLWGLFLDETAIRGLPYSVG 952

Query: 704  WYSYIPINLMRKSVALK-LP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLS 761
              + +    +     LK LP S+ GL SL+ L+L  C+ +E  L     ++  L+ L+L 
Sbjct: 953  HLTRLERLDLENCRNLKSLPNSICGLKSLKGLSLNGCSNLEAFLEI-TEDMEQLEGLFLC 1011

Query: 762  KNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPN---IRQVRVNGCASLVTLLDALK 818
            +     LP+SI HL  L ++EL +C+ L +LP    N   +  + V  C  L  L D L+
Sbjct: 1012 ETGISELPSSIEHLRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLR 1071



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 178/678 (26%), Positives = 284/678 (41%), Gaps = 137/678 (20%)

Query: 429  KHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKD 488
            + L++LK + LS+S+ L++MP F+   NLE+L LEGC  L E+HPS+     L  LN+  
Sbjct: 529  ERLEELKGIDLSNSKQLVKMPKFSSMSNLERLNLEGCISLRELHPSIGDLKSLTYLNLGG 588

Query: 489  CTSLITLPGKILMKSLE-----------------------------KLNLKSLPTTISGL 519
            C  L +    +  +SLE                             K  +++LP++I  L
Sbjct: 589  CEQLRSFLSSMKFESLEVLYLNCCPNLKKFPEIHGNMECLKELYLNKSGIQALPSSIVYL 648

Query: 520  KCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRS 579
              L  L++S    F++FPEI  +ME L EL+   + I+ LP SI  L+ L +LNL +C +
Sbjct: 649  ASLEVLNLSYCSNFKKFPEIHGNMECLKELYFNRSGIQELPSSIVYLASLEVLNLSDCSN 708

Query: 580  LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTK 639
             E  P    N+K LR L L  CSK +KFP+    M  L  L L  + IKE+PSSI  L  
Sbjct: 709  FEKFPEIHGNMKFLRELYLERCSKFEKFPDTFTYMGHLRGLHLRESGIKELPSSIGYLES 768

Query: 640  LELLNLSDCKNLVR-----------------------LPSSIIALKSLKTLNLSGCFKLE 676
            LE+L+LS C    +                       LP+SI +L SL+ L+L  C K E
Sbjct: 769  LEILDLSCCSKFEKFPEIQGNMKCLLNLFLDETAIKELPNSIGSLTSLEMLSLRECSKFE 828

Query: 677  NVPETLGQIESLEELDISGTAVPHSTSWYSYIP----INLMRKSVALKLPSLSG------ 726
               +    +  L EL + G+ +        Y+     +NL   S   K P + G      
Sbjct: 829  KFSDVFTNMGRLRELCLYGSGIKELPGSIGYLESLEELNLRYCSNFEKFPEIQGNMKCLK 888

Query: 727  -LC-----------------SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSL 768
             LC                 +L  L+L+ C+ +E   P    N+ +L  L+L + +   L
Sbjct: 889  MLCLEDTAIKELPNGIGRLQALEILDLSGCSNLE-RFPEIQKNMGNLWGLFLDETAIRGL 947

Query: 769  PTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR---VNGCASLVTLLDALKLCKSDST 825
            P S+ HL++L  ++LE+C+ L+SLP     ++ ++   +NGC++L   L+  +  +    
Sbjct: 948  PYSVGHLTRLERLDLENCRNLKSLPNSICGLKSLKGLSLNGCSNLEAFLEITEDMEQLEG 1007

Query: 826  MIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVT 885
            +  C   +                                 SE+P    +     S+ + 
Sbjct: 1008 LFLCETGI---------------------------------SELPSSIEHLRGLKSLELI 1034

Query: 886  RPSNLYNKKKLVGYAICCV-FHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQ 944
               NL      +G   C    HV    + +N   +  + Q        I     R   G 
Sbjct: 1035 NCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSQQC-------ISCSSERYDSGS 1087

Query: 945  AGSDHLWLLYLSRQTCYDIRLPLE------SNLEPFESNHV-NVSFEPWLGQGLEVKMCG 997
                 LW+ Y  +     I +P +      +N +    N V N SF        ++K CG
Sbjct: 1088 TSDPALWVTYFPQ-----IGIPSKYRSRKWNNFKAHFYNRVYNASFTCGENASFKMKSCG 1142

Query: 998  LHPVYMDEVEELDQTTNQ 1015
            +H +Y  + +   Q + +
Sbjct: 1143 IHLIYAQDQKHWPQPSGK 1160



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 130/286 (45%), Gaps = 33/286 (11%)

Query: 365  MTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPL--KFLPSNLQMDKTIEIYMCYSRIG 422
            + NL L +    +LPN +  L++ L +L  R      KF      M +  E+ +  S I 
Sbjct: 793  LLNLFLDETAIKELPNSIGSLTS-LEMLSLRECSKFEKFSDVFTNMGRLRELCLYGSGIK 851

Query: 423  ELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLI 482
            EL   I +L+ L+ + L +  N  + P+  G     K++    T + E+   +     L 
Sbjct: 852  ELPGSIGYLESLEELNLRYCSNFEKFPEIQGNMKCLKMLCLEDTAIKELPNGIGRLQALE 911

Query: 483  ILNMKDCTSLITLP----------GKIL--------------MKSLEKL------NLKSL 512
            IL++  C++L   P          G  L              +  LE+L      NLKSL
Sbjct: 912  ILDLSGCSNLERFPEIQKNMGNLWGLFLDETAIRGLPYSVGHLTRLERLDLENCRNLKSL 971

Query: 513  PTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLL 572
            P +I GLK L  L ++G      F EI E ME L  L L  T I  LP SIE L GL  L
Sbjct: 972  PNSICGLKSLKGLSLNGCSNLEAFLEITEDMEQLEGLFLCETGISELPSSIEHLRGLKSL 1031

Query: 573  NLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLS 618
             L NC +L  LP ++ NL CL SL +  C KL   P+ +RS + +S
Sbjct: 1032 ELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSQQCIS 1077


>gi|224131066|ref|XP_002328445.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838160|gb|EEE76525.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1176

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 347/969 (35%), Positives = 487/969 (50%), Gaps = 128/969 (13%)

Query: 1    MDSRCEKLRFLMDSGSS-DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            M+SR E +  L+  GS+  V ++GI GM G+GK+T A  VY     +FE   F  NVRE 
Sbjct: 179  MESRVEDIESLLSFGSTGTVLIVGIWGMCGIGKSTTAEAVYHRNCSKFEGHCFFQNVREE 238

Query: 60   SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            S K G+               D+ +             LQRKKVL+V+DDV D + L+ L
Sbjct: 239  SKKHGI---------------DHRM-------------LQRKKVLIVLDDVNDPQVLKYL 270

Query: 120  AGNREWFGSGSRIIITSRDEH-LLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
             G    FG GSRII+TSRD   L+     D++Y+   L+ D+AL+LF++ AFK   P++ 
Sbjct: 271  VGEDGLFGQGSRIIVTSRDRQVLINACDEDKIYEVKILDKDDALRLFSLHAFKQNNPIEG 330

Query: 179  CVQLSARIIRYAGGLPLALEVLG-SFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
             + LS  ++    G+PL LEVLG S  S RSV+ W S + +L      +I   L++ +  
Sbjct: 331  YIGLSKTVVSCVKGIPLVLEVLGASVYSKRSVEYWESKVAQLRTNGGEDIKKCLEMCYHE 390

Query: 238  LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDL 297
            L + +KKIFLDIACFF    RD +   L+        GI  LI+ CLI +  N +WMHD+
Sbjct: 391  LDQTQKKIFLDIACFFGRCKRDLLQQTLD---LEERSGIDRLIDMCLIKIVQNKIWMHDM 447

Query: 298  LQELGQQIVQRQ--SPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
            L +LG++IV ++   P E   RSRLWK ++V  VLT + GT  VE I+L+      E+ L
Sbjct: 448  LLKLGKKIVLQEHVDPRE---RSRLWKADDVNRVLT-TQGTRKVESIILNLLAITKEMIL 503

Query: 356  CASAKAFSKMTNLRLLKI-------------------CNLQLPNGLEYLSNRLRLLGWRG 396
              S  AF  M+NLRLLK                      + LP GL +LSN LR+L W  
Sbjct: 504  --SPTAFEGMSNLRLLKFYYPPFFGDPSKEKIMNRRRVRIHLPQGLHFLSNELRILHWYN 561

Query: 397  YPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGA-P 455
            YPLK LPSN   +K +E +M  S++ +LW   + L  LKVM L  S  L          P
Sbjct: 562  YPLKSLPSNFCPEKLVEFHMHCSQLEQLWNEFQPLKNLKVMNLRSSSKLSLSDSDLSKFP 621

Query: 456  NLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI-LMKSLEKL------N 508
            NLE L L  C  L  +  S+    +L  L +  C SL TLP  I  +  L KL      +
Sbjct: 622  NLEVLNLGQCRGLAGLPSSIKYSTRLTELILYRCDSLSTLPSSIGCLSQLVKLKLIFCRS 681

Query: 509  LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHL-EGTAIRGLPLSIELLS 567
            L SLP +I  LK L  L +    K    P     ++ L +L+L   + +  LP +I  L 
Sbjct: 682  LASLPDSIGELKSLEDLYLYFCSKLASLPNSFRELKCLVKLNLIRCSELVSLPDNIGELK 741

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS- 626
             LV L L +C  LE LP ++  LKCL  L LS  SKL   P  +  +K L +L L   S 
Sbjct: 742  SLVELKLFSCSKLESLPNSIGGLKCLAELCLSNFSKLTSLPNSIGKLKCLVKLNLSYFSK 801

Query: 627  IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIE 686
            +  +P     L  L LL++S C  LV LP+SI  LK L  LNLSGC +L N+P ++  +E
Sbjct: 802  LASLPDCFGELKSLVLLHISFCPKLVSLPNSIGQLKCLAELNLSGCSELANLPNSIYYLE 861

Query: 687  SLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCS----------LRKLNLT 736
            SL+              W     INL R  +  K P L+  CS          L+ LNL 
Sbjct: 862  SLK--------------W-----INLERCYMLNKSPVLNPRCSEVEEIAFGGCLQYLNLG 902

Query: 737  DCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP 796
               + E  +P  IG+L SL++L LS N F  +P +I  L  L+ ++L  C+RLQ LP+LP
Sbjct: 903  ASGVSE--IPGSIGSLVSLRDLRLSCNDFERIPANIKQLPMLIKLDLHGCERLQHLPELP 960

Query: 797  PNIRQVRVNGCASLVTL----LDALKLCKSDSTMIACLDSLKLLGN-------------K 839
             +++ +  + C SL +L    +   K   + S      + LKL  N             +
Sbjct: 961  SSLQVLMASYCISLRSLASIFIQGGKEYAAASQQFNFSNCLKLDQNACNRIMEDVHLRIR 1020

Query: 840  SLAFSML-REYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLY---NKKK 895
             +A S+  REY       R    + +PG E+PEWF Y+N G S ++  P++ +   N  +
Sbjct: 1021 RMASSLFNREYFGKPIRVR----LCIPGLEVPEWFCYKNTGGS-SLNIPAHWHRTTNTDQ 1075

Query: 896  LVGYAICCV 904
             +G+  C V
Sbjct: 1076 FLGFTFCAV 1084


>gi|357452821|ref|XP_003596687.1| Disease-resistance protein [Medicago truncatula]
 gi|355485735|gb|AES66938.1| Disease-resistance protein [Medicago truncatula]
          Length = 1288

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 279/755 (36%), Positives = 410/755 (54%), Gaps = 85/755 (11%)

Query: 1   MDSRCEKLRFLM--DSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE 58
           M  R E+L  L+   S + D R++GI GMGG+GKTT A V+YD IS++F+A  F+ N  +
Sbjct: 239 MQPRIEQLEKLLKLSSENDDFRVLGIWGMGGVGKTTHATVLYDRISYQFDARCFIHNTSK 298

Query: 59  ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRK-KVLLVIDDVVDVKQLQ 117
           I   GG+VS+Q+Q+L Q L   +   ++  +   ++ +RLQ   KVLLV+D++  ++QLQ
Sbjct: 299 IYMDGGIVSVQKQILGQTLDERNLDSYDTCEIAGIMINRLQSGIKVLLVLDNIDHLEQLQ 358

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
            LA N +    GSRIIIT+RDEH+L+ +G D V++   LN ++A +LF  KAFK      
Sbjct: 359 ELAINPKLLCRGSRIIITTRDEHILRVYGADTVHEVPLLNSNDAYELFCRKAFKGEDQTS 418

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
           +CV+L   +++YA  LPLA++V+GSFL  R   +W+  L  L+  P S+I+D+LQ+S DG
Sbjct: 419 DCVELIPEVLKYAQHLPLAIKVVGSFLCTRDATQWKDALASLKNSPDSKIMDVLQMSIDG 478

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDL 297
           LQ  EK+IF+ IACFFKG    YV   L+ CG HP IGI+ ++EK LIT+ N  + MHD+
Sbjct: 479 LQHEEKEIFMHIACFFKGEREVYVKRILDACGLHPHIGIQRILEKSLITIKNQEIHMHDM 538

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTEST----------------------- 334
           LQELG++IV+ + PEE G  SRLW+  +  HVL   T                       
Sbjct: 539 LQELGKKIVRHRFPEEPGSWSRLWRYNDFYHVLMTETDTPTSASIHKIVVWPLYVLGTLE 598

Query: 335 ----------------------------GTELVEGIVLDNYHHENEVYLCASAKAFSKMT 366
                                       GT  V+ IVLD    + E +     + FS M 
Sbjct: 599 KLSLVIFGTLDLGTISYHEISIIREQCVGTNNVKAIVLD----QKENFSKCRTEGFSNMR 654

Query: 367 NLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWK 426
           NL LL + +      L +LSN LR L W GYP   LPSN +    +E+ M +S I  LW+
Sbjct: 655 NLGLLILYHNNFSGNLNFLSNNLRYLLWHGYPFTSLPSNFEPYYLVELNMPHSNIQRLWE 714

Query: 427 GIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNM 486
           G K L  LK M LS+S+ L   P F   P LE+L   GCT L ++HPS+    +L+ L++
Sbjct: 715 GRKDLPYLKRMDLSNSKFLTETPKFFWTPILERLDFTGCTNLIQVHPSIGHLTELVFLSL 774

Query: 487 KDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHL 546
           ++C+SL+ L   I                +S L  L  L +SG  K  + P+      +L
Sbjct: 775 QNCSSLVNLDFGI----------------VSNLYSLRVLRLSGCTKLEKTPDFTG-ASNL 817

Query: 547 SELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
             L ++G T++  +  SI  ++ L  L+L++C  L  +P +++ +  L +L L GC KL 
Sbjct: 818 EYLDMDGCTSLSTVHESIGAIAKLRFLSLRDCIILAGIPNSINTITSLVTLDLRGCLKLT 877

Query: 606 KFP--EIVRSMKDLSELFLDGT--SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
             P  + + S    S +FLD +  ++ +VP +I  L  LE LNL    N   LP + + L
Sbjct: 878 TLPLGQNLSSSHMESLIFLDVSFCNLNKVPDAIGELHCLERLNLQG-NNFDALPYTFLNL 936

Query: 662 KSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
             L  LNL+ C KL   P     I +L++L + G+
Sbjct: 937 GRLSYLNLAHCHKLRAFP----HIPTLKDLSLVGS 967


>gi|224133498|ref|XP_002328057.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222837466|gb|EEE75845.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1187

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 302/789 (38%), Positives = 425/789 (53%), Gaps = 92/789 (11%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D    K+  L+D  + DVR++GI GMGG+GKTTIAR VY+ I  +FE   F+ NVRE  
Sbjct: 200 IDEHVRKIESLLDMETQDVRIVGIWGMGGIGKTTIARAVYNKICTKFEGFSFMANVREEL 259

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            +  +  LQR+  S++L   D  IW   +    +  RL+RKKVL+V DDV     LQ L 
Sbjct: 260 KRRTVFDLQRRFFSRIL---DQKIW---ETSPFIKDRLRRKKVLIVFDDVDSSMVLQELL 313

Query: 121 -GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
              R+ FG GSRI++TSRD+ +L    VD  Y+   LN+ +ALQLF  KAFK   P  + 
Sbjct: 314 LEQRDAFGPGSRILVTSRDQQVL-NQEVDATYEVKALNHMDALQLFKTKAFKKTCPTIDH 372

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           + L  R++ Y  G PLAL VLGS L  +S ++W S    L      EIL++L++SFDGL 
Sbjct: 373 IHLLGRMVTYTKGNPLALVVLGSALCDKSKEDWYSASNGLGQIQNVEILNVLRVSFDGLN 432

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
             ++ IFL IACFFKG +R + T  LE         I VLI+K L+   +N L MHDLLQ
Sbjct: 433 TEQRSIFLHIACFFKGINRLHFTRILENKCPAVHYYISVLIDKSLVLASDNILGMHDLLQ 492

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+   IV  +S E+ G+RSRL+  E++  VL E+ GT+ V+GI LD         +    
Sbjct: 493 EMAYSIVHEES-EDPGERSRLFDPEDIYKVLKENKGTKRVKGICLDMSKSRK---MSLKT 548

Query: 360 KAFSKMTNLRLLKICN----------LQLPN-GLEYLSNRLRLLGWRGYPLKFLPSNLQM 408
            +F+ M  L  L   N          + LP+ GLEYLSN LR   W G+P K LP +   
Sbjct: 549 DSFAGMNCLEFLIFYNPSYFEVEKNRVHLPHSGLEYLSNELRYFHWDGFPSKSLPQDFSA 608

Query: 409 DKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
           +  ++     S++ +LW G ++L  LK + LS S  L  +PD + A NLE + L GC  L
Sbjct: 609 ENLVQFDFSESKVEKLWSGKQNLLNLKAINLSSSRCLTELPDLSKAINLEYINLSGCESL 668

Query: 469 YEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLPTTISGLKCL 522
             +  S     KL  L++ DC +LITLP +I  K LE+L      N+++ P T +    +
Sbjct: 669 KRVPSSFQHLEKLKCLDLTDCHNLITLPRRIDSKCLEQLFITGCSNVRNCPETYAD---I 725

Query: 523 STLDVSG--------DLKFRE-----------FPEIVEHMEHLSELHLEGTAIRGLPLSI 563
             LD+SG         +K R+           FP I E++     L L+ TAI  +P SI
Sbjct: 726 GYLDLSGTSVEKVPLSIKLRQISLIGCKNITKFPVISENIR---VLLLDRTAIEEVPSSI 782

Query: 564 ELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLD 623
           E L+ LV L++ +C+ L  LP ++  LK L +  LSGCSKL+ FPEI R MK L  L+L 
Sbjct: 783 EFLTKLVSLHMFDCKRLSKLPSSICKLKFLENFYLSGCSKLETFPEIKRPMKSLKTLYLG 842

Query: 624 GTSIKEVPSSIELLTKLELLNL--SDCKNLVRLPSSIIAL-----KSLKT---------- 666
            T+IK++PSSI     L  L L  +  K L+ LP S+  L     +SL+T          
Sbjct: 843 RTAIKKLPSSIRHQKSLIFLELDGASMKELLELPPSLCILSARDCESLETISSGTLSQSI 902

Query: 667 -LNLSGCFKLEN--VPETL------GQIESLEELDISGTAVPH---STSWYSYIPINLMR 714
            LNL+ CF+ +   + E +      G I  + ++   G+ +PH   + SW S        
Sbjct: 903 RLNLANCFRFDQNAIMEDMQLKIQSGNIGDMFQILSPGSEIPHWFINRSWGS-------- 954

Query: 715 KSVALKLPS 723
            SVA++LPS
Sbjct: 955 -SVAIQLPS 962



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 206/468 (44%), Gaps = 90/468 (19%)

Query: 501 MKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEH---------LSELHL 551
           M    K++LK+   + +G+ CL  L +  +  + E  +   H+ H         L   H 
Sbjct: 538 MSKSRKMSLKT--DSFAGMNCLEFL-IFYNPSYFEVEKNRVHLPHSGLEYLSNELRYFHW 594

Query: 552 EGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIV 611
           +G   + LP        LV  +    + +E L     NL  L+++ LS    L + P++ 
Sbjct: 595 DGFPSKSLPQDFSA-ENLVQFDFSESK-VEKLWSGKQNLLNLKAINLSSSRCLTELPDLS 652

Query: 612 RSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLS 670
           +++ +L  + L G  S+K VPSS + L KL+ L+L+DC NL+ LP  I + K L+ L ++
Sbjct: 653 KAI-NLEYINLSGCESLKRVPSSFQHLEKLKCLDLTDCHNLITLPRRIDS-KCLEQLFIT 710

Query: 671 GCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVAL-------KLP- 722
           GC  + N PET   I  L   D+SGT+V         +P+++  + ++L       K P 
Sbjct: 711 GCSNVRNCPETYADIGYL---DLSGTSVEK-------VPLSIKLRQISLIGCKNITKFPV 760

Query: 723 --------------------SLSGLCSLRKLNLTDCNLMEGALPSDIGNL---------- 752
                               S+  L  L  L++ DC  +   LPS I  L          
Sbjct: 761 ISENIRVLLLDRTAIEEVPSSIEFLTKLVSLHMFDCKRL-SKLPSSICKLKFLENFYLSG 819

Query: 753 CS--------------LKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPN 798
           CS              LK LYL + +   LP+SI H   L+ +EL D   ++ L +LPP+
Sbjct: 820 CSKLETFPEIKRPMKSLKTLYLGRTAIKKLPSSIRHQKSLIFLEL-DGASMKELLELPPS 878

Query: 799 IRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQ 858
           +  +    C SL T+        S S  +   +  +   N  +    L+     + +  Q
Sbjct: 879 LCILSARDCESLETISSG---TLSQSIRLNLANCFRFDQNAIMEDMQLKIQSGNIGDMFQ 935

Query: 859 HLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFH 906
            LS   PGSEIP WF+ ++ GSS+ +  PS+ +   KL   A C + H
Sbjct: 936 ILS---PGSEIPHWFINRSWGSSVAIQLPSDCH---KLKAIAFCLIVH 977


>gi|356506795|ref|XP_003522161.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1088

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 240/553 (43%), Positives = 342/553 (61%), Gaps = 26/553 (4%)

Query: 14  SGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLL 73
           S S+DV ++GI GMGG+GKTTIA+ +Y+ I   FE   FL+ + E+  +   +  Q QLL
Sbjct: 227 SNSNDVLLLGIWGMGGIGKTTIAKAIYNKIGRNFEGRSFLEQIGELWRQDA-IRFQEQLL 285

Query: 74  SQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRII 133
             + K     I NV  G   L  RL  K+V LV+DDV DV+QL +L G+REWFGSGSRII
Sbjct: 286 FDIYK-TKRKIHNVELGKQALKERLCSKRVFLVLDDVNDVEQLSALCGSREWFGSGSRII 344

Query: 134 ITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGL 193
           IT+RD+H+L+   VD++Y    ++  E+++LF+  AFK   P +   +LS  +I Y+GGL
Sbjct: 345 ITTRDKHILRGDRVDKMYTMKEMDESESIELFSWHAFKQASPREGFTELSNDVIEYSGGL 404

Query: 194 PLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL-QELEKKIFLDIACF 252
           PLAL VLG  L    + EW++ L++L+  P  ++   L+IS+DGL  + E+ IFLDIACF
Sbjct: 405 PLALTVLGCHLFDMKIIEWKTVLDKLKRIPHDQVQKKLKISYDGLSDDTERDIFLDIACF 464

Query: 253 FKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQELGQQIVQRQSP 311
           F G DR+     L GCG     GIRVL+E+ L+TV + N L MHDLL+++G++I++ +SP
Sbjct: 465 FIGMDRNDAMCILNGCGLFAENGIRVLVERSLVTVDDKNKLGMHDLLRDMGREIIRAKSP 524

Query: 312 EELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD-NYHHENEVYLCASAKAFSKMTNLRL 370
           ++L +RSRLW  E+V  VL + TGT+ +EG+ L     + N    C S +AF +M  LRL
Sbjct: 525 KDLEERSRLWFNEDVLDVLAKKTGTKTIEGLALKLPLTNSN----CFSTEAFKEMKKLRL 580

Query: 371 LKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKH 430
           L++  +QL    EYLS  LR L W G+PLK +P N      + I +  S +  +WK  + 
Sbjct: 581 LQLAGVQLDGDFEYLSKDLRWLCWNGFPLKCIPKNFHQGSLVSIELENSNVKLVWKEAQL 640

Query: 431 LDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCT 490
           ++KLK++ LSHS NL + PDF+  PNLEKL+L  C RL+E+  ++   NK++++N+KDC 
Sbjct: 641 MEKLKILNLSHSHNLTQTPDFSNLPNLEKLVLIDCPRLFEVSHTVGHLNKILMINLKDCI 700

Query: 491 SLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELH 550
           S                 L SLP +I  LK L TL +SG LK  +  E +E ME L  L 
Sbjct: 701 S-----------------LHSLPRSIYKLKSLKTLILSGCLKIDKLEEDLEQMESLMTLI 743

Query: 551 LEGTAIRGLPLSI 563
            + TAI  +P SI
Sbjct: 744 ADNTAITKVPFSI 756



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 164/390 (42%), Gaps = 83/390 (21%)

Query: 542 HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
           H   L  + LE + ++ +    +L+  L +LNL +  +L   P   SNL  L  L L  C
Sbjct: 617 HQGSLVSIELENSNVKLVWKEAQLMEKLKILNLSHSHNLTQTP-DFSNLPNLEKLVLIDC 675

Query: 602 SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
            +L                        EV  ++  L K+ ++NL DC +L  LP SI  L
Sbjct: 676 PRLF-----------------------EVSHTVGHLNKILMINLKDCISLHSLPRSIYKL 712

Query: 662 KSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKL 721
           KSLKTL LSGC K++ + E L Q+ESL  L    TA+       + +P ++    V  K 
Sbjct: 713 KSLKTLILSGCLKIDKLEEDLEQMESLMTLIADNTAI-------TKVPFSI----VTSKS 761

Query: 722 PSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSIT-HLS---- 776
                +C     +   C++    + S +  + SL        +F  +P+ I+ H++    
Sbjct: 762 IGYISMCGYEGFS---CDVFPSIILSWMSPMSSLSSHI---QTFAGMPSPISLHVANNSS 815

Query: 777 -KLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSD------------ 823
             LL+I  ED  +L+SL       RQ+          +LDAL    S             
Sbjct: 816 HNLLSI-FEDLPKLRSLWVECGTKRQL----SQETTIILDALYAINSKALESVATTSQLP 870

Query: 824 ----STMIACLDSLKLLGNK----SLAFSM---------LREYLEAVSNTRQHLSVVVPG 866
               ST+I C + + + G+K    SL   M         L+  +    NT ++   ++PG
Sbjct: 871 NVNASTLIECGNQVHISGSKDSLTSLLIQMGMSCQIAHILKHKILQNMNTSENGGCLLPG 930

Query: 867 SEIPEWFMYQNEGSSITVTRPSNLYNKKKL 896
              P+W+ + +E SS+    P    NK+ L
Sbjct: 931 DRYPDWWTFHSEDSSVIFEIPQ--VNKRNL 958


>gi|357452805|ref|XP_003596679.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355485727|gb|AES66930.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1406

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 268/711 (37%), Positives = 408/711 (57%), Gaps = 55/711 (7%)

Query: 4    RCEKLRFLMDSGSSD--VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS 61
            R E+L  L+   S D  +R++GI GM G+GKTT+A V+YD IS +F+AS F++NV +I  
Sbjct: 438  RVEELESLLKLSSDDDELRVVGIWGMAGIGKTTLASVLYDRISSQFDASCFIENVSKIYR 497

Query: 62   KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAG 121
             GG VSLQ+Q+L Q +       ++  +   ++  RL  +K L+V+D+V  ++Q++ LA 
Sbjct: 498  DGGAVSLQKQILRQTIDEKYLETYSPSEISGIVRKRLCNRKFLVVLDNVDLLEQVEELAI 557

Query: 122  NREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHG---------LNYDEALQLFNMKAFKT 172
            N E  G GSR+IIT+R+ H+L+ +G +++   HG         LN ++A +LF  KAFK+
Sbjct: 558  NPELVGKGSRMIITTRNMHILRVYG-EQLSLSHGTCVSYEVPLLNNNDARELFYRKAFKS 616

Query: 173  YQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQ 232
              P  EC+ L+  +++Y  GLPLA+ V+GSFL  R+ ++WR  L RL   P ++++D LQ
Sbjct: 617  KDPASECLNLTPEVLKYVEGLPLAIRVVGSFLCTRNANQWRDALYRLRNNPDNKVMDALQ 676

Query: 233  ISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTL 292
            + F+GL   +++IFL IACFFKG   +YV   L+ CG HP +GI+ LIE  LIT+ N  +
Sbjct: 677  VCFEGLHSEDREIFLHIACFFKGEKEEYVKRILDACGLHPHLGIQGLIESSLITIRNQEI 736

Query: 293  WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
             MH++LQELG++IV++Q PEE G  SRLW  E+   V+   TGT+ V+ I+LD     +E
Sbjct: 737  HMHEMLQELGKKIVRQQFPEEPGSWSRLWLYEDFNPVMMTETGTDKVKAIILDKKEDISE 796

Query: 353  VYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
             Y    A+  S M  L++L + +      L +LSN L+ L W GYP   LP N +  + +
Sbjct: 797  -YPLLKAEGLSIMRGLKILILYHTNFSGSLNFLSNSLQYLLWYGYPFASLPLNFEPLRLV 855

Query: 413  EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
            E+ M  S I  LW G K+L  LK + LS+S  L+  P+FTG+  +E+L   GC  L  +H
Sbjct: 856  ELNMPCSLIKRLWDGHKNLPCLKRVDLSNSRCLVETPNFTGSQIIERLDFTGCINLSYVH 915

Query: 473  PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
            PS+ L  +L  L+++ C +L++L             L   P   S L  L  L +SG  K
Sbjct: 916  PSIGLLKELAFLSLEGCRNLVSLV------------LDGHPA--SNLYSLKVLHLSGCSK 961

Query: 533  FREFPEIVEHMEHLSELHL----EGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS 588
                 EIV     +S L      +  ++  +  SI  L+ L  L+ + C SL  +P +++
Sbjct: 962  L----EIVSDFRGVSNLEYLDIDQCVSLSTINQSIGDLTQLKFLSFRECTSLASIPESIN 1017

Query: 589  NLKCLRSLKLSGCSKLKKFP-----------------EIVRSMKDLSELFLDGT--SIKE 629
            ++  L +L L GC KL+  P                 E++ S    S +FLD +  ++  
Sbjct: 1018 SMTSLETLDLCGCFKLESLPLLGNTSVSEINVDLSNDELISSYYMNSLIFLDLSFCNLSR 1077

Query: 630  VPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
            VP++I  L  LE LNL +  NL+ LPSS+  L SL  LNL+ C +L+++PE
Sbjct: 1078 VPNAIGELRHLERLNL-EGNNLISLPSSVGGLSSLAYLNLAHCSRLQSLPE 1127



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 177/622 (28%), Positives = 276/622 (44%), Gaps = 124/622 (19%)

Query: 432  DKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL-----LLHNKLIILNM 486
            DK+K +IL   E++   P    A  L   I+ G   L   H +       L N L  L +
Sbjct: 781  DKVKAIILDKKEDISEYP-LLKAEGLS--IMRGLKILILYHTNFSGSLNFLSNSLQYL-L 836

Query: 487  KDCTSLITLPGKILMKSLEKLNL-----KSLPTTISGLKCLSTLDVSGDLKFREFP---- 537
                   +LP       L +LN+     K L      L CL  +D+S      E P    
Sbjct: 837  WYGYPFASLPLNFEPLRLVELNMPCSLIKRLWDGHKNLPCLKRVDLSNSRCLVETPNFTG 896

Query: 538  -EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVT---VSNLKCL 593
             +I+E ++    ++L          SI LL  L  L+L+ CR+L  L +     SNL  L
Sbjct: 897  SQIIERLDFTGCINLSYVHP-----SIGLLKELAFLSLEGCRNLVSLVLDGHPASNLYSL 951

Query: 594  RSLKLSGCSKLKKFPEIVRSMKDLSEL-FLD---GTSIKEVPSSIELLTKLELLNLSDCK 649
            + L LSGCSKL    EIV   + +S L +LD     S+  +  SI  LT+L+ L+  +C 
Sbjct: 952  KVLHLSGCSKL----EIVSDFRGVSNLEYLDIDQCVSLSTINQSIGDLTQLKFLSFRECT 1007

Query: 650  NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIP 709
            +L  +P SI ++ SL+TL+L GCFKLE++P  LG   S+ E+++  +     +S+Y    
Sbjct: 1008 SLASIPESINSMTSLETLDLCGCFKLESLP-LLGNT-SVSEINVDLSNDELISSYY---- 1061

Query: 710  INLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLP 769
                             + SL  L+L+ CNL    +P+ IG L  L+ L L  N+ +SLP
Sbjct: 1062 -----------------MNSLIFLDLSFCNL--SRVPNAIGELRHLERLNLEGNNLISLP 1102

Query: 770  TSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCAS------LVTLLDALKLCKSD 823
            +S+  LS L  + L  C RLQSLP+L           CA+         ++      +S 
Sbjct: 1103 SSVGGLSSLAYLNLAHCSRLQSLPEL---------QLCATSSYGGRYFKMVSGSHNHRSG 1153

Query: 824  STMIACLDSLKLLGNK-SLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSS- 881
              +  C   LK+ G    LA   L+  ++   + R  L +VVP   IP WF +Q  G+S 
Sbjct: 1154 LYIFNC-PHLKMTGQSLDLAVLWLKNLVKNPCHFRCGLDIVVPSDTIPLWFDHQFAGNSR 1212

Query: 882  ITVTRPSNLYNK-KKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRD 940
            + +T     YNK    +G+A C  F         NC  S P    +  + + +Y + F  
Sbjct: 1213 VKITD----YNKFDNWLGFAFCVAF-------VENCCPSTPA---SSQLPYPLY-LSFES 1257

Query: 941  KFGQ----------------AGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFE 984
            +  +                + ++++WL+Y+SR  C+            F +    ++F+
Sbjct: 1258 EQTEETFDIPIQLDLINVDGSNAEYIWLIYISRPHCH------------FVTTGAQITFK 1305

Query: 985  PWLGQGLEVKMCGLHPVYMDEV 1006
                 GLE+K  GLH V+  ++
Sbjct: 1306 A--HPGLELKTWGLHMVFEHDI 1325


>gi|356494937|ref|XP_003516337.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1258

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/567 (42%), Positives = 350/567 (61%), Gaps = 24/567 (4%)

Query: 1   MDSRCEKLRFLMDSG-SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR + +  L+D   S+DV ++GI GMGG+GKTTIA+ +++ I   FE   FL  +RE 
Sbjct: 369 VESRVQDMIQLLDQKLSNDVELLGIWGMGGIGKTTIAKAIFNKIGRNFEGRSFLAQIREA 428

Query: 60  -SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
                G V LQ QLL  + K +   I N+  G ++L  RL+ KKVLL++DDV  + QL +
Sbjct: 429 WEQDAGQVHLQEQLLFDIDKESKTKIPNIELGKNILKERLRHKKVLLILDDVNKLHQLNA 488

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L GNREWFGSGSRIIIT+RD H+L+   VD+VY    +N DE+++LF+  AFK   P ++
Sbjct: 489 LCGNREWFGSGSRIIITTRDMHILRGRRVDKVYTMKEMNEDESIELFSWHAFKQPSPRED 548

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             +LS  +I Y+GGLPLALEVLGS+L    V EW+  LE+L+  P  E+ + L+ISFDGL
Sbjct: 549 FTELSRNVIAYSGGLPLALEVLGSYLFDMEVTEWKCVLEKLKKIPNDEVQEKLKISFDGL 608

Query: 239 Q-ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHD 296
             + E++IFLDIACFF G DR+ V + L G   +   GIRVL+E+ L+TV   N L MHD
Sbjct: 609 NDDTEREIFLDIACFFIGMDRNDVIHILNGSELYAENGIRVLVERSLVTVDKKNKLGMHD 668

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL+++G++I++ +SP+E  +RSRLW  E+V  VL + +GT+ VEG+ L       +   C
Sbjct: 669 LLRDMGREIIRVKSPKEPEERSRLWFHEDVLDVLLKESGTKAVEGLTLMLPRSNTK---C 725

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            S  +F KM  LRLL+   ++L    + LS  LR L W G+P K +P++L     + I +
Sbjct: 726 LSTTSFKKMKKLRLLQFAGVELAGDFKNLSRDLRWLYWDGFPFKCIPADLYQGSLVSIEL 785

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             S I  +WK    ++KLK++ LSHS  L + PDF+  P LEKLIL  C RL+E+  ++ 
Sbjct: 786 ENSNISHMWKEALLMEKLKILNLSHSHYLTQTPDFSNLPYLEKLILIDCPRLFEVSHTIG 845

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
               ++++N++DC S                 L++LP +I  LK L TL +SG L   + 
Sbjct: 846 HLRDIVLINLEDCVS-----------------LRNLPRSIYNLKSLKTLILSGCLMIDKL 888

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSI 563
            E +E M+ L+ L  + TAI  +P S+
Sbjct: 889 EEDLEQMKSLTTLIADRTAITRVPFSV 915



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 111/223 (49%), Gaps = 24/223 (10%)

Query: 502 KSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFR--EFP--EIVEHMEHLSE----LHLEG 553
           K++E L L  LP   S  KCLST       K R  +F   E+    ++LS     L+ +G
Sbjct: 709 KAVEGLTLM-LPR--SNTKCLSTTSFKKMKKLRLLQFAGVELAGDFKNLSRDLRWLYWDG 765

Query: 554 TAIRGLPLSIELLSG-LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVR 612
              + +P   +L  G LV + L+N     +    +  ++ L+ L LS    L + P+   
Sbjct: 766 FPFKCIP--ADLYQGSLVSIELENSNISHMWKEALL-MEKLKILNLSHSHYLTQTPDF-S 821

Query: 613 SMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSG 671
           ++  L +L L D   + EV  +I  L  + L+NL DC +L  LP SI  LKSLKTL LSG
Sbjct: 822 NLPYLEKLILIDCPRLFEVSHTIGHLRDIVLINLEDCVSLRNLPRSIYNLKSLKTLILSG 881

Query: 672 CFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMR 714
           C  ++ + E L Q++SL  L    TA+       + +P +++R
Sbjct: 882 CLMIDKLEEDLEQMKSLTTLIADRTAI-------TRVPFSVVR 917


>gi|357500727|ref|XP_003620652.1| Elongation factor Ts [Medicago truncatula]
 gi|355495667|gb|AES76870.1| Elongation factor Ts [Medicago truncatula]
          Length = 2436

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 256/611 (41%), Positives = 364/611 (59%), Gaps = 55/611 (9%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS-KGGLVSLQRQLLSQLL 77
           VR I ICGMGG+GKTT+A  +Y  ISH F AS F+D+V +I     G +  Q+Q+L Q L
Sbjct: 217 VRAIRICGMGGIGKTTLAMNLYGQISHRFSASCFIDDVSKIYRLYDGPIDAQKQILHQTL 276

Query: 78  KLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSR 137
            +  + I N +  ID++  RL+R+K LL+ D+V  V+QL+ +  +RE  G+GSRIII SR
Sbjct: 277 GIEHHQICNRYSAIDLIQRRLRREKALLIFDNVDQVEQLEKIGVHRECLGAGSRIIIISR 336

Query: 138 DEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQ-LSARIIRYAGGLPLA 196
           DEH+LK + VD VYK   LN+ E+ +LF  KAFK  + +    Q L+ +I+ YA GLPLA
Sbjct: 337 DEHILKEYEVDVVYKVQLLNWTESHKLFCRKAFKAEKIIMSNYQNLANKILNYASGLPLA 396

Query: 197 LEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGN 256
           ++VLGSFL GR+V EW+S L +L   P  +++D+LQ+SFDGL++ EK+IFLDIAC F   
Sbjct: 397 IKVLGSFLFGRNVTEWKSALAKLRESPNKDVMDVLQLSFDGLEKTEKQIFLDIACLFNCL 456

Query: 257 DRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGK 316
           D +YV N L  CGF+  IGIRVLI+K LI+++   + MH LL+ELG++IVQ+ S +E  K
Sbjct: 457 DMEYVKNILNCCGFNADIGIRVLIDKSLISINGQNIEMHSLLKELGRKIVQKTSSKEPRK 516

Query: 317 RSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI-CN 375
            SRLW  +++  V  E+     VE I+L               +  SKM+NLRLL I CN
Sbjct: 517 WSRLWSAKQLYDVKMENMEKN-VEAILLKRNEE-------VDVEHLSKMSNLRLLIIKCN 568

Query: 376 LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLK 435
             +  G  +LSN LR + W  YP K+LP++   ++ +E+ +  S I +LWK  K+L  L+
Sbjct: 569 WNISGGSNFLSNELRYVDWHEYPFKYLPTSFHPNELVELILWCSNIKQLWKNKKYLRNLR 628

Query: 436 VMILSHSENLIRMPDFTGAPNLEKLILE------------------------GCTRLYEI 471
            + L  S NL ++ DF   PNLE L LE                        GC +L E+
Sbjct: 629 KLDLMGSINLEKIIDFGEFPNLEWLDLELCKNLVELDPSIGLLRKLVYLNLGGCKKLVEL 688

Query: 472 HPSLLLHNKLIILNMKDCTSLITLPGKIL-MKSLEKLNL--------KSLPT-------- 514
            PS+ L  KL+ LN+KDC +L+++P  I  + SLE LN+         SLP+        
Sbjct: 689 DPSIGLLRKLVCLNVKDCENLVSIPNNIFDLSSLEYLNMNGCSKVFNNSLPSPTRHTYLL 748

Query: 515 -TISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLN 573
            ++  L CL  +D+S      + P+ +E +  L  L+L+G     LP S+  LS LV LN
Sbjct: 749 PSLHSLDCLRGVDISF-CNLSQVPDAIEDLHWLERLNLKGNNFVTLP-SLRKLSELVYLN 806

Query: 574 LKNCRSLEILP 584
           L++C+ LE LP
Sbjct: 807 LEHCKLLESLP 817



 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 241/578 (41%), Positives = 348/578 (60%), Gaps = 33/578 (5%)

Query: 32   KTTIARVVYDLISHEFEASGFLDNVREISSK-GGLVSLQRQLLSQLLKLADNSIWNVFDG 90
            KTT+A  +YD ISH F A+ F+D+V +I     G +  Q+Q+L Q L +  + I N +  
Sbjct: 1592 KTTLAMTLYDQISHRFSANCFIDDVSKIYRLCDGPLDAQKQILFQTLDIKHHQICNRYIA 1651

Query: 91   IDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEV 150
             D++  RL R+K L+++D+V   +Q + +A +REW G+GSRIII SRDEH+LK +GVD V
Sbjct: 1652 TDLIRRRLSREKTLVILDNVDQGEQSEKIAVHREWLGAGSRIIIISRDEHILKEYGVDVV 1711

Query: 151  YKPHGLNYDEALQLFNMKAFKTYQPLQECVQ-LSARIIRYAGGLPLALEVLGSFLSGRSV 209
            YK   LN  ++ +LF  KAFK  + +    Q L   I+ YA GLPLA++VLGSFL GR+V
Sbjct: 1712 YKVPLLNRTDSHKLFCQKAFKHEKIIMSSYQNLDFEILSYANGLPLAIKVLGSFLFGRNV 1771

Query: 210  DEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCG 269
             EW+S L RL   P ++++D+LQ+SFDGL  +EK+IFLDIACFF      YV N L  CG
Sbjct: 1772 TEWKSALARLRERPDNDVMDVLQLSFDGLNHMEKEIFLDIACFFNRESEKYVKNVLNHCG 1831

Query: 270  FHPVIGIRVLIEKCLITVHNNT-LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCH 328
            FH  IG+RVLI+K LI++++++ + MH LL ELG++IV+  S +E  K SR+W ++++ +
Sbjct: 1832 FHADIGLRVLIDKSLISINSDSVIEMHSLLVELGRKIVRENSSKEQRKWSRVWSQKQLYN 1891

Query: 329  VLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI-CNLQLPNGLEYLSN 387
            V  E      VE IVL++   E         +  SKM+NLRLL I     +P+    LSN
Sbjct: 1892 VTMEKMERH-VEAIVLNDDDVEE-----VDVEQLSKMSNLRLLIIKWGPNIPSSPSSLSN 1945

Query: 388  RLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIR 447
             LR + W  YP K+LPS+      +E+ + YS I +LWK  K+L  L+ + L HS NL +
Sbjct: 1946 TLRYVEWNYYPFKYLPSSFHPSDLVELILMYSDIKQLWKNKKYLPNLRRLDLRHSRNLEK 2005

Query: 448  MPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKIL-MKSLEK 506
            + DF   PNLE L LE C  L E+ PS+ L  KL+ LN++ C +L+++P  I  + SLE 
Sbjct: 2006 IVDFGEFPNLEWLNLELCANLVELDPSIGLLRKLVYLNLEGCVNLVSIPNNISGLSSLED 2065

Query: 507  LNLKS-----------LPT---------TISGLKCLSTLDVSGDLKFREFPEIVEHMEHL 546
            LN+             LPT         ++  L CL  +D+S      + P+ +E +  L
Sbjct: 2066 LNICGCSKAFSSSSIMLPTPMRNTYLLPSVHSLNCLRKVDISF-CHLNQVPDSIECLHSL 2124

Query: 547  SELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
             +L+L G     LP S+  LS LV LNL++C+ L+  P
Sbjct: 2125 EKLNLGGNDFVTLP-SLRKLSKLVYLNLEHCKFLKSFP 2161



 Score =  119 bits (298), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 201/450 (44%), Gaps = 57/450 (12%)

Query: 577  CRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLD-GTSIKEVPSSIE 635
            C +++ L      L+ LR L L G   L+K  +      +L  L L+   ++ E+  SI 
Sbjct: 611  CSNIKQLWKNKKYLRNLRKLDLMGSINLEKIIDF-GEFPNLEWLDLELCKNLVELDPSIG 669

Query: 636  LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
            LL KL  LNL  CK LV L  SI  L+ L  LN+  C  L ++P  +  + SLE L+++G
Sbjct: 670  LLRKLVYLNLGGCKKLVELDPSIGLLRKLVCLNVKDCENLVSIPNNIFDLSSLEYLNMNG 729

Query: 696  ------TAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDI 749
                   ++P  T  ++Y+            LPSL  L  LR ++++ CNL +  +P  I
Sbjct: 730  CSKVFNNSLPSPTR-HTYL------------LPSLHSLDCLRGVDISFCNLSQ--VPDAI 774

Query: 750  GNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI-----RQVRV 804
             +L  L+ L L  N+FV+LP S+  LS+L+ + LE CK L+SLPQLP        R    
Sbjct: 775  EDLHWLERLNLKGNNFVTLP-SLRKLSELVYLNLEHCKLLESLPQLPSPTTIGRERDEND 833

Query: 805  NGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVV 864
            +   S + + +  KL + +                S+ FS + +++  ++N +    +V+
Sbjct: 834  DDWISGLVIFNCSKLGERERC-------------SSMTFSWMIQFI--LANPQSTSQIVI 878

Query: 865  PGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQ 924
            PGSEIP W   Q  G SI +     +++      Y +CC    +      N    +    
Sbjct: 879  PGSEIPSWINNQCVGDSIQIDLSPAMHDNNNQSHYFVCCAVFTMVPQLSANMLLIFDNSS 938

Query: 925  LNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLE-PFESNHVN-VS 982
            +          I          S HLW+ Y+ R +      P   N+    E + +  + 
Sbjct: 939  I------MWIPISINRDLVTTESSHLWIAYIPRDS-----YPENGNMYFKMEISIIKLLG 987

Query: 983  FEPWLGQGLEVKMCGLHPVYMDEVEELDQT 1012
             E   G G EVK CG   V   ++ +L+ T
Sbjct: 988  IEESEGLGFEVKSCGYRWVCKQDLRKLNFT 1017



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/157 (43%), Positives = 93/157 (59%), Gaps = 7/157 (4%)

Query: 640  LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP 699
            LE LNL  C NLV L  SI  L+ L  LNL GC  L ++P  +  + SLE+L+I G +  
Sbjct: 2015 LEWLNLELCANLVELDPSIGLLRKLVYLNLEGCVNLVSIPNNISGLSSLEDLNICGCSKA 2074

Query: 700  HSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELY 759
             S+S  S +    MR +    LPS+  L  LRK++++ C+L    +P  I  L SL++L 
Sbjct: 2075 FSSS--SIMLPTPMRNTYL--LPSVHSLNCLRKVDISFCHL--NQVPDSIECLHSLEKLN 2128

Query: 760  LSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP 796
            L  N FV+LP S+  LSKL+ + LE CK L+S PQLP
Sbjct: 2129 LGGNDFVTLP-SLRKLSKLVYLNLEHCKFLKSFPQLP 2164


>gi|356497814|ref|XP_003517752.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1376

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 326/1040 (31%), Positives = 512/1040 (49%), Gaps = 166/1040 (15%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYD-LISHEFEASGFLDNVR-E 58
            +D R E+L+ L+D  S+DVR++G+ GMGG+GKTT+A+ +++ L+ H FE   F+ N+R +
Sbjct: 189  LDDRVEELKKLLDVKSNDVRVLGLYGMGGVGKTTLAKSLFNSLVVHNFERRSFITNIRSQ 248

Query: 59   ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            +S   GLVSLQ  +   L     + I +V DGI  +   +Q  +VLL++DDV +V+QL+ 
Sbjct: 249  VSKHDGLVSLQNTIHGDLSGGKKDPINDVNDGISAIKRIVQENRVLLILDDVDEVEQLKF 308

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHG--VDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
            L G REWF  GSR++IT+RD  +L      VD+ Y+   L +  +++LF   A +  +P 
Sbjct: 309  LMGEREWFYKGSRVVITTRDREVLTKAKSYVDKHYEVKELEFSPSMELFCYHAMRRKEPA 368

Query: 177  QECVQLSARIIRYAGGLPLALEVLGSFL-SGRSVDEWRSTLERLEIEPPSEILDILQISF 235
            +  + L+ +I+   GGLPLALEV GSFL   R++ EW+  +E+++   PS I D+L+ISF
Sbjct: 369  EGFLDLAKQIVEKTGGLPLALEVFGSFLFDKRTMREWKDAVEKMKQISPSGIHDVLKISF 428

Query: 236  DGLQELEKKIFLDIACFFKGND--RDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TL 292
            D L E EK IFLDIAC F   +  R+ V + L GC F   I + VL  +CLI +  +  L
Sbjct: 429  DALDEQEKCIFLDIACLFVQMEMKREDVVDILNGCNFRGDIALTVLTARCLIKITGDGKL 488

Query: 293  WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD------- 345
            WMHD ++++G+QIV  ++  + G RSRLW  +E+  VL    GT  V+GIV+D       
Sbjct: 489  WMHDQVRDMGRQIVHSENLADPGLRSRLWDRDEILIVLKSMKGTRNVQGIVVDCVKRRMS 548

Query: 346  -------------NYHH-----------------------ENEVYLCASAKAFSKMTNLR 369
                         N+                         E    +   AK F  M +LR
Sbjct: 549  TPRDRSADEITWENFRRKPSCKLALEYIKEKYKKYVRDREEKAKEVVLQAKNFESMVSLR 608

Query: 370  LLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWK--G 427
            LL+I   +L      L   L+ L W+  PL+++PS+    +   + +  S I  LW    
Sbjct: 609  LLQINYSRLEGQFRCLPPGLKWLQWKQCPLRYMPSSYSPLELAVMDLSESNIETLWSRSN 668

Query: 428  IKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMK 487
             K  + L V+ LS+   L   PD TG  +L+K++LE C+ L  IH SL   + L+ LN++
Sbjct: 669  NKVAEHLMVLNLSNCHRLTATPDLTGYLSLKKIVLEECSHLIRIHESLGNLSSLVHLNLR 728

Query: 488  DCTSLITLPGKIL-MKSLEKL------NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
             C +L+ LP  +  MK LE L       LK+LP  +S + CL  L +  +    E PE +
Sbjct: 729  FCYNLVELPSDVSGMKHLEDLILSDCWKLKALPKDLSCMICLRQLLID-NTAVTELPESI 787

Query: 541  EHM---EHLS---------------------ELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
             H+   E+LS                     EL L  TA+  LP S+  L  L  L+L  
Sbjct: 788  FHLTKLENLSANGCNSLKRLPTCIGKLCSLQELSLNHTALEELPYSVGSLEKLEKLSLVG 847

Query: 577  CRSLEILPVTVSNL-----------------------KCLRSLKLSGCSKLKKFPEIVRS 613
            C+SL ++P ++ NL                         LR L + GC+ L K P  + +
Sbjct: 848  CKSLSVIPNSIGNLISLAQLFLDISGIKELPASIGSLSYLRKLSVGGCTSLDKLPVSIEA 907

Query: 614  MKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL---------------------- 651
            +  + EL LDGT I  +P  I+ +  LE L + +C+NL                      
Sbjct: 908  LVSIVELQLDGTKITTLPDQIDAMQMLEKLEMKNCENLRFLPVSFGCLSALTSLDLHETN 967

Query: 652  -VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWY----S 706
               LP SI  L++L  L L  C +L+ +P++ G ++SL+ L +  T + H    +    S
Sbjct: 968  ITELPESIGMLENLIRLRLDMCKQLQRLPDSFGNLKSLQWLQMKETTLTHLPDSFGMLTS 1027

Query: 707  YIPINLMRK-----SVALKLPS---------LSGLCSLRKLNLTDCN--LMEGALPSDIG 750
             + +++ R+     +  + +P+         L   C+L  L   + +   M G +P D  
Sbjct: 1028 LVKLDMERRLYLNGATGVIIPNKQEPNSKAILRSFCNLTLLEELNAHGWGMCGKIPDDFE 1087

Query: 751  NLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
             L SL+ L L  N+  SLP S+  LS L  + L DC+ L  LP LP ++ ++ +  C ++
Sbjct: 1088 KLSSLETLSLGHNNIFSLPASMIGLSYLKKLLLSDCRELIFLPPLPSSLEELNLANCIAV 1147

Query: 811  VTLLD-ALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAV-----SNTRQHLSV-- 862
              + D +      +  +  C   + + G + L  S+ R Y+        +  R+   V  
Sbjct: 1148 QYMHDISNLKLLEELNLTNCEKVVDIPGLEHLK-SLRRLYMNGCIGCSHAVKRRFTKVLL 1206

Query: 863  ------VVPGSEIPEWFMYQ 876
                  ++PGS +P+WF  +
Sbjct: 1207 KKLEILIMPGSRVPDWFTAE 1226


>gi|356506778|ref|XP_003522153.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1161

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 240/567 (42%), Positives = 361/567 (63%), Gaps = 25/567 (4%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++ R +++  L+D  SS+ V ++G+ GMGG+GKTT A+ +Y+ I   FE   FL ++RE+
Sbjct: 277 VEPRVQEMIQLLDLKSSNHVLLLGMWGMGGIGKTTTAKAIYNKIGRNFEGRSFLAHIREV 336

Query: 60  SSKG-GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
             +  G + LQ+Q+L  + K  + +I NV  G  +L  RL  K+VLLV+DDV +++QL +
Sbjct: 337 WGQDTGKICLQKQILFDICKQTE-TIHNVESGKYLLKQRLCHKRVLLVLDDVSELEQLNT 395

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G+REWFG GSRIIITSRD+H+L+  GVD+VY   G++  E+++LF+  AFK     ++
Sbjct: 396 LCGSREWFGRGSRIIITSRDKHILRGKGVDKVYIMKGMDERESIELFSWHAFKQESLPED 455

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
            ++LSA +I Y+GGLPLALEVLG +L    V EW++ L++L+  P  ++   L+IS+DGL
Sbjct: 456 FIELSANLIEYSGGLPLALEVLGCYLFDMEVTEWKTVLQKLKRIPNCQVQKKLKISYDGL 515

Query: 239 -QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHD 296
             + E++IFLDIACFF G DR+ V   L GCG     GIRVL+E+ L+TV + N L MHD
Sbjct: 516 SDDTEREIFLDIACFFIGMDRNDVICILNGCGLFAEHGIRVLVERSLVTVDDKNKLGMHD 575

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL+++G++I++ +SP+E  +RSRLW  E+V  VL++ TGT+ VEG+ L       +   C
Sbjct: 576 LLRDMGREIIRAKSPKEPEERSRLWFHEDVLDVLSKETGTKAVEGLTLMLPRTNTK---C 632

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            S  AF KM  LRLL++  +QL    + LS  LR L W G+PLK +P++      + I +
Sbjct: 633 LSTTAFKKMKKLRLLQLAGVQLAGDFKNLSRDLRWLCWHGFPLKCIPTDFYQGSLVSIEL 692

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             S +  LWK  + ++KLK++ LSHS NL + PDF+  PNLEKLIL  C RL ++  ++ 
Sbjct: 693 ENSNVKLLWKETQLMEKLKILNLSHSSNLTQTPDFSNLPNLEKLILIDCPRLSKVSHTIG 752

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
              +++++N+KDC S                 L++LP +I  LK L TL +SG L   + 
Sbjct: 753 RLKEVVMINLKDCVS-----------------LRNLPRSIYKLKSLKTLILSGCLMIDKL 795

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSI 563
            E +E M+ L+ L  + TAI  +P S+
Sbjct: 796 EEDLEQMKSLTTLIADNTAITRVPFSL 822



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 190/448 (42%), Gaps = 73/448 (16%)

Query: 502  KSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP----EIVEHMEHLSELHLEGTAIR 557
            K++E L L  LP T    KCLST       K R       ++    ++LS   L      
Sbjct: 616  KAVEGLTLM-LPRT--NTKCLSTTAFKKMKKLRLLQLAGVQLAGDFKNLSR-DLRWLCWH 671

Query: 558  GLPLS---IELLSG-LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRS 613
            G PL     +   G LV + L+N  ++++L      ++ L+ L LS  S L + P+   +
Sbjct: 672  GFPLKCIPTDFYQGSLVSIELENS-NVKLLWKETQLMEKLKILNLSHSSNLTQTPDF-SN 729

Query: 614  MKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC 672
            + +L +L L D   + +V  +I  L ++ ++NL DC +L  LP SI  LKSLKTL LSGC
Sbjct: 730  LPNLEKLILIDCPRLSKVSHTIGRLKEVVMINLKDCVSLRNLPRSIYKLKSLKTLILSGC 789

Query: 673  FKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRK 732
              ++ + E L Q++SL  L    TA+       + +P +L+R S ++   SL G     +
Sbjct: 790  LMIDKLEEDLEQMKSLTTLIADNTAI-------TRVPFSLVR-SRSIGYISLCGHEGFSR 841

Query: 733  LNLTDCNLMEGALPSDIGNLCS-------LKELYLSKNSFVSLPTSITHLSKLLNIELED 785
                        +PS I +  S       L + Y+  +S VSL    +    L  I  +D
Sbjct: 842  ----------DVIPSIIWSWMSPTKNPSCLVQSYVGMSSLVSLNIPNSSSQDLSTIS-KD 890

Query: 786  CKRLQSL-------PQLPPNIRQV--RVNGCASLVTLLDALKLCK----SDSTMIACLDS 832
              +L+SL       PQL  + R +   +    +L  L       +      S +I C   
Sbjct: 891  LPKLRSLWVDCSSKPQLSRDTRIILDALYATTNLGELESTATTSQVPNIKTSALIECNSQ 950

Query: 833  LKL-------------LGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEG 879
            +               +G       +L++ +     T      ++PG   P+W  +  +G
Sbjct: 951  VHFSGSKSSLKSLLIHMGMNCQGSYILKQRILQNMTTSGCYYGLLPGDNYPDWLTFNFDG 1010

Query: 880  SSITVTRPS-NLYNKKKLVGYAICCVFH 906
            SS+T   P  N  N K ++     C+ H
Sbjct: 1011 SSVTFDVPRVNGRNLKTMM-----CIIH 1033


>gi|224127750|ref|XP_002329168.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870949|gb|EEF08080.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1018

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 303/821 (36%), Positives = 440/821 (53%), Gaps = 118/821 (14%)

Query: 98  LQRKKVLLVIDDVVDVKQLQSLA-GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGL 156
           L+RKKVL+V+DDV + +QLQ L+ G  + FG GS+I++TSRD+ +L  +GVD +YK  GL
Sbjct: 202 LRRKKVLIVLDDVDNSRQLQELSLGVHDLFGPGSKILVTSRDKQVLIKNGVDAIYKVQGL 261

Query: 157 NYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTL 216
           N  +AL+L ++ AFK   P ++ ++L  R++ YA G PLAL VLGS L  RS ++W S L
Sbjct: 262 NNHDALRLLSLNAFKKNCPKRDHIELLERMVDYAKGNPLALIVLGSSLYDRSKEKWYSAL 321

Query: 217 ERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGI 276
            +L   P  EI  +L+IS+DGL   +++IFLDIA FF G + ++    L+ C       +
Sbjct: 322 NKLGKVPNPEIQRVLRISYDGLDGEQQQIFLDIAFFFNGAEWNHAVKVLDSCYSSLQFDL 381

Query: 277 RVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGT 336
            +LI+K LIT+  NTL MHD+LQE+   IV+ +S +  GKRSRL   E++ HVL +  GT
Sbjct: 382 SILIDKSLITISQNTLEMHDILQEMAYSIVREES-KNPGKRSRLCDHEDIYHVLKKKKGT 440

Query: 337 ELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICN----------LQLP-NGLEYL 385
           E VEGI LD      E++L   +  F++M +LR LK  +          + LP +GL+YL
Sbjct: 441 EAVEGICLD-ISKMPEMHL--ESDTFARMNSLRFLKFYHPFYFMDSKDKVHLPLSGLKYL 497

Query: 386 SNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENL 445
           S+ L+ L W  +P K LP N   +  +++ +  SR+ +LW G++ L  L+ + LS S  L
Sbjct: 498 SDELKYLHWHRFPAKSLPQNFCAENIVDLTLHSSRVEQLWTGVQDLLNLRWIDLSRSTYL 557

Query: 446 IRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLE 505
           + +PD + A NLE + L  C  L E+H S+    KL IL +  C +L  +P +I  K L 
Sbjct: 558 LEIPDLSRAKNLEYIDLSFCESLLEVHSSIQHLEKLEILILSGCKNLGIVPKRIESKFLR 617

Query: 506 KLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIEL 565
                              LD+S   K R+ PEI  ++E   EL L+GTAI  LP SI  
Sbjct: 618 ------------------ILDLSHCKKVRKCPEISGYLE---ELMLQGTAIEELPQSI-- 654

Query: 566 LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT 625
                                 S +K +R L LSGCS + KFP+I  ++K L  L+   T
Sbjct: 655 ----------------------SKVKEIRILDLSGCSNITKFPQIPGNIKQLRLLW---T 689

Query: 626 SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI 685
            I+EVPSSIE L  L +L ++ C+ L  LP+ I  LK L+ L LS C KLE+ PE L  +
Sbjct: 690 VIEEVPSSIEFLATLGVLEMNFCEQLSSLPTCICKLKCLERLELSYCPKLESFPEILEPM 749

Query: 686 ESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGAL 745
           ESL+ LD+SGTA+                                              L
Sbjct: 750 ESLKCLDLSGTAIKE--------------------------------------------L 765

Query: 746 PSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRV 804
           PS I  L  L  L L++ ++ VSLP+ I  L  L  ++L  CK L SLP+LPP++  +  
Sbjct: 766 PSSIKFLSCLYMLQLNRCDNLVSLPSFIEKLPVLKYLKLNYCKSLLSLPELPPSVEFLEA 825

Query: 805 NGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVV 864
            GC SL TL       +S+   +   +  KL     LA + ++         R+ +++++
Sbjct: 826 VGCESLETLSIGK---ESNFWYLNFANCFKLDQKPLLADTQMK---IQSGKMRREVTIIL 879

Query: 865 PGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
           PGSEIP WF  Q+ GSS+ +  P+N +      G+A   VF
Sbjct: 880 PGSEIPGWFCDQSMGSSVAIKLPTNCHQHN---GFAFGMVF 917


>gi|147774849|emb|CAN69078.1| hypothetical protein VITISV_004764 [Vitis vinifera]
          Length = 1478

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 362/1217 (29%), Positives = 564/1217 (46%), Gaps = 240/1217 (19%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-I 59
            +DSR E++  L+D  S+ +R++G+ G GG+GK+T+A+ +Y+ +   FE   F+ NV++ +
Sbjct: 193  LDSRVEEVLELLDLKSNSIRVLGLYGPGGVGKSTLAKALYNKLVAHFENRSFISNVKKYL 252

Query: 60   SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            + + GL+SLQ +L+  L  +A + +  V  G+  + S +Q K+VL+++DDV D  QL ++
Sbjct: 253  AQENGLLSLQIKLIGDLSGMASH-VNEVNAGLVAIKSIVQEKRVLIILDDVDDASQLTAI 311

Query: 120  AGN---REWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
             G    R+WF  GSRIIIT+RD  +L     +E+Y+   LN  E+LQLF+  A    +P 
Sbjct: 312  XGRKKWRKWFYEGSRIIITTRDREVLHELHENELYEVKQLNSPESLQLFSHYALGRVKPT 371

Query: 177  QECVQLSARIIRYAGGLPLALEVLGSFL-SGRSVDEWRSTLERLEIEPPSEILDILQISF 235
             + + LS +I+   GGLPLALEV GS L   R ++EW   L++L+   P ++  +L+IS+
Sbjct: 372  PDYLPLSKQIVSLTGGLPLALEVFGSSLYDKRKIEEWEDALQKLKQIRPMDLQGVLKISY 431

Query: 236  DGLQELEKKIFLDIACFF--KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TL 292
            DGL E EK  FLDIAC F   G  ++   + L+GCGF   IGI+VL++K L+ +  + TL
Sbjct: 432  DGLDEQEKCXFLDIACLFIKMGMKKEDAIDILKGCGFRAEIGIKVLVDKSLLKIAEDYTL 491

Query: 293  WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD------- 345
            WMHD L+++G+QIV  ++ E+LG RSRLW   E+  VL  + G+  ++G+VLD       
Sbjct: 492  WMHDQLRDMGRQIVLHENHEDLGMRSRLWDRSEILRVLQNNLGSRCIQGMVLDFVSDIFM 551

Query: 346  -------------------------------NYHHENEVYLCASAKAFSKMTNLRLLKIC 374
                                            +  E E  L    K+F  M NLRLL+I 
Sbjct: 552  KDSAAAWGRFRGTPNFTTAVTWLKETYKEYFQHAAEKERELILQTKSFESMINLRLLQID 611

Query: 375  NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR-IGELWKG------ 427
            N+QL    + +   L+ L WRG PLK LPS+        + +  S+ I  LW G      
Sbjct: 612  NVQLEGEFKLMPAELKWLQWRGCPLKTLPSDFCPQGLRVLDLSESKNIVRLWGGRWWSWH 671

Query: 428  ---------IKHLDK--------------------------------LKVMILSHSENLI 446
                       H+++                                L VM      NL 
Sbjct: 672  NNKCYQTWYFSHINQSAPDHDMEEQVPLLGFHISPLLLPYQDVVGENLMVMNXHGCCNLT 731

Query: 447  RMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKIL-MKSLE 505
             +PD +G   LEKLIL+ C  L +IH S+     L+ L++ +C +L+  P  +  +K+L 
Sbjct: 732  AIPDLSGNQALEKLILQHCHGLVKIHKSIGDIISLLHLDLSECKNLVEFPSDVSGLKNLX 791

Query: 506  KL------NLKSLPTTISGLKCLSTLDVSGDL-----------------------KFREF 536
             L       LK LP  IS +K L  L + G +                         ++ 
Sbjct: 792  TLILSGCSKLKELPENISYMKSLRELLLDGTVIEKLPESVLRLTRLERLSLNNCQSLKQL 851

Query: 537  PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
            P  +  +E L EL    +A+  +P S   L+ L  L+L  C+S+  +P +V NLK L   
Sbjct: 852  PTCIGKLESLRELSFNDSALEEIPDSFGSLTNLERLSLMRCQSIYAIPDSVXNLKLLTEF 911

Query: 597  KLSG-----------------------CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSS 633
             ++G                       C  L K P  +  +  +  L LDGTSI ++P  
Sbjct: 912  LMNGSPVNELPASIGSLSNLKDLSVGXCRFLSKLPASIEGLASMVXLQLDGTSIMDLPDQ 971

Query: 634  IELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL-----------------------NLS 670
            I  L  L  L +  CK L  LP +I ++ SL TL                       NL+
Sbjct: 972  IGGLKTLRRLEMRFCKRLESLPEAIGSMGSLNTLIIVDAPMTELPESIGKLENLIMLNLN 1031

Query: 671  GCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYIPINLMRKSVALKLP----- 722
             C +L  +P ++G ++SL  L +  TAV   P S    + +   LM K   L+LP     
Sbjct: 1032 KCKRLRRLPGSIGXLKSLHHLXMEETAVRQLPESFGMLTSLMRLLMAKRPHLELPQALGP 1091

Query: 723  -------------------SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKN 763
                               S S L  L +L+     +  G +P D   L SL+ L L +N
Sbjct: 1092 TETKVLGAEENSELIVLPTSFSNLSLLYELDARAWKI-SGKIPDDFDKLSSLEILNLGRN 1150

Query: 764  SFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKL---- 819
            +F SLP+S+  LS L  + L  C+ L++LP LP ++ +V    C +L  + D   L    
Sbjct: 1151 NFSSLPSSLRGLSILRKLLLPHCEELKALPPLPSSLMEVNAANCYALEVISDLSNLESLQ 1210

Query: 820  ------CKS--DSTMIACLDSLK---LLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSE 868
                  CK   D   + CL SLK   + G  S + ++      A+ N R   ++ +PGS 
Sbjct: 1211 ELNLTNCKKLVDIPGVECLKSLKGFFMSGCSSCSSTV------ALKNLR---TLSIPGSN 1261

Query: 869  IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNC- 927
            IP+WF      +    ++  NL  K  ++G  +    H+    R  +   S P  +    
Sbjct: 1262 IPDWF----SRNVAIFSKRKNLVIKAVIIGVVVSLSHHIQDELR--DQLPSVPGIEAKIL 1315

Query: 928  HIGHGIYGIGFRDKFG--QAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEP 985
             +   ++G    D  G  +   DH   LYL R   +    P+ S L+  +   V +   P
Sbjct: 1316 RMNRQVFGTML-DLTGVPKTDEDH---LYLCRYREFH---PIVSMLKDGDKIQVTMRNPP 1368

Query: 986  WLGQGLEVKMCGLHPVY 1002
             + +G+E+K  G+H ++
Sbjct: 1369 MV-KGVELKKSGIHLIF 1384


>gi|317106744|dbj|BAJ53239.1| JHS03A10.2 [Jatropha curcas]
          Length = 947

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 286/722 (39%), Positives = 405/722 (56%), Gaps = 69/722 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DSR + +  L+   SS  R +GI GMGG GKTT+AR  YD IS++FE S FL + R+  
Sbjct: 188 IDSRIKHIEALISMESSAARTVGIWGMGGSGKTTLARATYDRISYQFERSYFLSDFRK-Q 246

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNV-FDGIDMLGSRLQRKKVLLVIDDVVDVKQL-QS 118
            K  L  L+  L + +L   D  + N+     D +  R++R KVLLV+DDV    QL Q 
Sbjct: 247 GKNSLFQLRDSLFTFILNEKDLKMRNLDLCLTDYIQDRIRRTKVLLVVDDVDSSAQLNQL 306

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           LA     FGS S I++TSR+  +LK + VD +Y    LN  EAL+LF++ AFK   P  +
Sbjct: 307 LATEYSLFGSRSVILVTSRNRQVLK-NVVDVIYPMMELNEHEALRLFSLNAFKQAYPSSD 365

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
            ++ S R+I Y  G PLAL+VLGS L  RS + W S L+RLE  P  EI ++L++S+D L
Sbjct: 366 HMEKSKRVIAYTKGNPLALKVLGSLLFDRSEEYWCSALKRLENIPKPEIHNVLRVSYDVL 425

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDL 297
              E++IFLD+ACFF G + D +   L+G      + I+ LI++CLITV  +  L +HDL
Sbjct: 426 DSEEQRIFLDVACFFTGKNLDDIITILDGYFSSVYLTIKTLIDRCLITVSWDKRLEVHDL 485

Query: 298 LQELGQQIVQRQS--PEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           LQE+G++IV  +S  PE    RSRLW  E++ H+L E+ GTE +EGI LD         +
Sbjct: 486 LQEMGRKIVNDESIRPE---NRSRLWNPEDIRHILLENKGTEAIEGICLDLSKARE---I 539

Query: 356 CASAKAFSKMTNLRLLKICNLQ-----------LPNGLEYLSNRLRLLGWRGYPLKFLPS 404
           C    AF+ M NLR LK    +              GL +L   LR L W G P+K LP+
Sbjct: 540 CLRRDAFAGMHNLRYLKFYESKDIAHGGGKMQPYDGGLRFLPTALRYLHWYGCPVKTLPA 599

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
               +  + + M  SR+ +LW G+++L  LK + LS SE LI++PD + A N+E++ L+G
Sbjct: 600 YFGAENLVVLEMPESRVKKLWTGVQYLVNLKQIDLSWSEYLIKIPDLSKAINIERINLQG 659

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLST 524
           CT L E+H S     KL  L +  C                 +N++S+P++I G K +  
Sbjct: 660 CTSLVELHSSTQHLKKLEFLALSCC-----------------VNVRSIPSSI-GSKVIRC 701

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHLEGTA-IRGLP--LSIELLSGLVLLNLKNCRSLE 581
           +D+S  LK +  PEI+   + L  L LEG + +   P   + E+ SG   L++ NC  L 
Sbjct: 702 VDLSYCLKVKRCPEILS-WKFLKVLRLEGMSNLVKFPDIAATEISSGCDELSMVNCEKLL 760

Query: 582 ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM-----------------------KDLS 618
            LP ++   K L+ L LS CSKL+ FPEI+  M                       K L 
Sbjct: 761 SLPSSICKWKSLKYLYLSNCSKLESFPEILEPMNLVEIDMNKCKNLKRLPNSIYNLKYLE 820

Query: 619 ELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
            L+L GT+I+E+PSSIE LT L +L+LSDCKNL RLPS I  L  L+ + L  C  L ++
Sbjct: 821 SLYLKGTAIEEIPSSIEHLTCLTVLDLSDCKNLERLPSGIDKLCQLQRMYLHSCESLRSL 880

Query: 679 PE 680
           P+
Sbjct: 881 PD 882


>gi|297734814|emb|CBI17048.3| unnamed protein product [Vitis vinifera]
          Length = 872

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 295/805 (36%), Positives = 428/805 (53%), Gaps = 113/805 (14%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MDSR E+L  L+    +DVRM+G+ G+GG+GKTTI   +Y+ IS++FE+   L +VR+ S
Sbjct: 92  MDSRLERLISLLKIELNDVRMVGVYGLGGIGKTTIINALYNRISNQFESVSLLTDVRKES 151

Query: 61  SKG-GLVSLQRQLLSQLLKLADNSIW-NVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
           ++  GL+ LQ+QLL+  L+     +  +V +GI  +  +L  KKVL+ +DDV ++ QL+ 
Sbjct: 152 TENSGLLKLQQQLLNDTLRTTRKIVLRDVHEGIKEIRDKLSSKKVLVFLDDVDELTQLEH 211

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G  +WFG GSRIIIT+R + LL  H V+++Y+   L + EALQLF   AFK + P + 
Sbjct: 212 LIGKHDWFGPGSRIIITTRKKDLLTRHEVNDMYEVEKLYFHEALQLFCRYAFKQHHPKEG 271

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
              LS ++++YA GLPLAL+VLGS L G+ + +W+S L++LE  P  EI+ +L+ISFDGL
Sbjct: 272 YGDLSHQVVQYADGLPLALKVLGSLLFGKRLPDWKSELQKLEKVPNMEIVKVLKISFDGL 331

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDL 297
              ++ IFLDIACFF+G+D   V+  L+   F+   GI  L+++C IT+  +N + MHDL
Sbjct: 332 DYTQRMIFLDIACFFRGDDVKRVSRILDASEFNAESGINALVDRCFITISKDNRIDMHDL 391

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           L ++G+ IV ++ P E G+RSRLW+  ++  VL  +TGTE +EGI L   H +    +  
Sbjct: 392 LAQMGKGIVDQECPNEPGERSRLWRHIDIYRVLKRNTGTEKIEGIYL---HVDKSEQIQF 448

Query: 358 SAKAFSKMTNLRLLKIC--NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
           ++KAF +M  LRLL I   ++QL     +  + L  L W GY L+ LPSN   +  + + 
Sbjct: 449 TSKAFERMHRLRLLSISHNHVQLSKDFVFPYD-LTYLRWNGYSLESLPSNFHANNLVSLI 507

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           +  S I  LWKG   L  L+ + LS S+ LI +P+F+  PNLE+LIL G           
Sbjct: 508 LGNSNIKLLWKGNMCLRNLRRINLSDSQQLIELPNFSNVPNLEELILSG----------- 556

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
                        C SL +LPG                  I   K L TL  +G  K   
Sbjct: 557 -------------CVSLESLPG-----------------DIHESKHLLTLHCTGCSKLAS 586

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
           FP+I  ++  L EL L+ TAI+ LP SIELL GL  LNL NC++LE LP ++ NL+ L  
Sbjct: 587 FPKIKSNIAKLEELCLDETAIKELPSSIELLEGLRYLNLDNCKNLEGLPNSICNLRFLVV 646

Query: 596 LKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           L L GCSKL + PE +  M  L  L+L+  S +    S   L +   L+   C     + 
Sbjct: 647 LSLEGCSKLDRLPEDLERMPCLEVLYLNSLSCQLPSLSGLSLLRELYLD--QCNLTPGVI 704

Query: 656 SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRK 715
            S   L +LK  +L  C     V   +  + SLE L                        
Sbjct: 705 KSDNCLNALKEFSLGNCILNGGVFHCIFHLSSLEVL------------------------ 740

Query: 716 SVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHL 775
                             NL+ C+  EG   SDI                      I+ L
Sbjct: 741 ------------------NLSRCSPEEGGTLSDI-------------------LVGISQL 763

Query: 776 SKLLNIELEDCKRLQSLPQLPPNIR 800
           S L  ++L  CK+L  +P+LP ++R
Sbjct: 764 SNLRALDLSHCKKLSQIPELPSSLR 788



 Score = 46.6 bits (109), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 29/208 (13%)

Query: 616 DLSELFLDGTSIKEVPSSIEL--LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCF 673
           DL+ L  +G S++ +PS+     L  L L N     N+  L    + L++L+ +NLS   
Sbjct: 480 DLTYLRWNGYSLESLPSNFHANNLVSLILGN----SNIKLLWKGNMCLRNLRRINLSDSQ 535

Query: 674 KLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKL 733
           +L  +P     + +LEEL +SG     S      +P ++                 L  L
Sbjct: 536 QLIELP-NFSNVPNLEELILSGCVSLES------LPGDIHESK------------HLLTL 576

Query: 734 NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
           + T C+ +  + P    N+  L+EL L + +   LP+SI  L  L  + L++CK L+ LP
Sbjct: 577 HCTGCSKL-ASFPKIKSNIAKLEELCLDETAIKELPSSIELLEGLRYLNLDNCKNLEGLP 635

Query: 794 QLPPNIRQVRV---NGCASLVTLLDALK 818
               N+R + V    GC+ L  L + L+
Sbjct: 636 NSICNLRFLVVLSLEGCSKLDRLPEDLE 663


>gi|147774169|emb|CAN63551.1| hypothetical protein VITISV_032106 [Vitis vinifera]
          Length = 924

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 279/732 (38%), Positives = 406/732 (55%), Gaps = 54/732 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MDSR EKL  L+   S+DVRM+G+ G+GG+GKTTI   +Y+ ISH+FE+   L NVR+ S
Sbjct: 199 MDSRLEKLISLLKIESNDVRMVGVYGLGGIGKTTIINALYNQISHQFESVSLLTNVRKES 258

Query: 61  SK--GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
           +K  G L   Q+ L   L       + NV++GI ++  +L  KKVL+ +DDV ++ QL+ 
Sbjct: 259 TKNSGLLKLQQKLLDDTLRTKGQIVLKNVYEGIKIIRDKLSSKKVLVFLDDVDELTQLEH 318

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G   WFG GSRIIIT+R + LL  H V+++Y+   LN+ EALQLF   AFK +   + 
Sbjct: 319 LIGKHNWFGPGSRIIITTRKKDLLTRHEVNDIYEVKKLNFHEALQLFCRYAFKQHHLKEG 378

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
              LS +++RYA GLPLAL+VLGS L G+ +  W+S L +LE  P  EI+++L+ISFDGL
Sbjct: 379 YADLSHQVVRYADGLPLALKVLGSLLFGKRLPNWKSELRKLEKVPNMEIVNVLKISFDGL 438

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDL 297
              ++ IFLDIACFFKG D + V+  L+G  F+   GI  L+++C IT+  + T+ MHDL
Sbjct: 439 DYTQRMIFLDIACFFKGGDVEIVSRILDGSEFNAESGINALVDRCFITISKDKTIEMHDL 498

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           L ++G+ IV  + P E G+RSRLW+  ++  VL  +TGTE +EGI LD    E   + C 
Sbjct: 499 LAQMGKGIVDEECPNEPGERSRLWRHTDIYRVLKRNTGTEKIEGIFLDVDKSEQIQFTC- 557

Query: 358 SAKAFSKMTNLRLLKICN--LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
             KAF +M  LR L + +  +QLP    + S+ L  L W GY L+ LPSN   +    + 
Sbjct: 558 --KAFERMNRLRXLVVSHNRIQLPEDFVFSSDDLTCLSWDGYSLESLPSNFHPNDLALLK 615

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           +  S I  LWKG   L  L+ + LSHS+ LI +P+F+  PNLE+LIL GC  L  +   +
Sbjct: 616 LSNSNIKLLWKGNMCLRNLRYIDLSHSQQLIELPNFSNVPNLEELILSGCVSLESLPGDI 675

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
                L+ L+   C+ L + P               +   I  L+ LS LD +     +E
Sbjct: 676 HKLKHLLTLHCSGCSKLTSFP--------------KIKCNIGKLEVLS-LDETA---IKE 717

Query: 536 FPEIVEHMEHLSELHLEGTA-IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
            P  +E +E L  L+L+    + GLP SI  L  L +L+L+ C  L+ LP  +  + CL 
Sbjct: 718 LPSSIELLEGLRNLYLDNCKNLEGLPNSICNLRFLEVLSLEGCSKLDRLPEDLERMPCLE 777

Query: 595 SLKLSGCS------------------KLKKFPEIVRS---MKDLSELFLDGTSIK-EVPS 632
            L L+  S                  +    P +++S   +  L EL L   ++   V  
Sbjct: 778 VLSLNSLSCQLPSLSGLSLLRELYLDQCNLTPGVIKSDNCLNALKELRLRNCNLNGGVFH 837

Query: 633 SIELLTKLELLNLS-----DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
            I  L+ LE+L+LS     +   L  +   I  L +L+ L+LS C KL  +PE    +  
Sbjct: 838 CIFHLSSLEVLDLSRSNPEEGGTLSDILVGISQLSNLRALDLSHCMKLSQIPELPSSLRL 897

Query: 688 LEELDISGTAVP 699
           L+     GT++P
Sbjct: 898 LDMHSSIGTSLP 909



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 172/380 (45%), Gaps = 54/380 (14%)

Query: 394 WRGYPL-KFLPSNLQMDKTIEIYMCYSRIGELW---KGIKHLDKLKVMILSHSENLIRMP 449
           WR   + + L  N   +K   I++   +  ++    K  + +++L+ +++SH  N I++P
Sbjct: 522 WRHTDIYRVLKRNTGTEKIEGIFLDVDKSEQIQFTCKAFERMNRLRXLVVSH--NRIQLP 579

Query: 450 -DFT-GAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCT----------------- 490
            DF   + +L  L  +G +   E  PS    N L +L + +                   
Sbjct: 580 EDFVFSSDDLTCLSWDGYS--LESLPSNFHPNDLALLKLSNSNIKLLWKGNMCLRNLRYI 637

Query: 491 ------SLITLPGKILMKSLEKL------NLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
                  LI LP    + +LE+L      +L+SLP  I  LK L TL  SG  K   FP+
Sbjct: 638 DLSHSQQLIELPNFSNVPNLEELILSGCVSLESLPGDIHKLKHLLTLHCSGCSKLTSFPK 697

Query: 539 IVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKL 598
           I  ++  L  L L+ TAI+ LP SIELL GL  L L NC++LE LP ++ NL+ L  L L
Sbjct: 698 IKCNIGKLEVLSLDETAIKELPSSIELLEGLRNLYLDNCKNLEGLPNSICNLRFLEVLSL 757

Query: 599 SGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSI 658
            GCSKL + PE +  M  L  L L+  S +    S   L +   L+   C     +  S 
Sbjct: 758 EGCSKLDRLPEDLERMPCLEVLSLNSLSCQLPSLSGLSLLRELYLD--QCNLTPGVIKSD 815

Query: 659 IALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVA 718
             L +LK L L  C     V   +  + SLE LD+S +  P      S I          
Sbjct: 816 NCLNALKELRLRNCNLNGGVFHCIFHLSSLEVLDLSRSN-PEEGGTLSDI---------- 864

Query: 719 LKLPSLSGLCSLRKLNLTDC 738
             L  +S L +LR L+L+ C
Sbjct: 865 --LVGISQLSNLRALDLSHC 882



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 110/238 (46%), Gaps = 41/238 (17%)

Query: 606 KFPE-IVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSL 664
           + PE  V S  DL+ L  DG S++ +PS+      L LL LS+  N+  L    + L++L
Sbjct: 577 QLPEDFVFSSDDLTCLSWDGYSLESLPSNFHP-NDLALLKLSN-SNIKLLWKGNMCLRNL 634

Query: 665 KTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSL 724
           + ++LS   +L  +P     + +LEEL +SG                       + L SL
Sbjct: 635 RYIDLSHSQQLIELP-NFSNVPNLEELILSG----------------------CVSLESL 671

Query: 725 SG----LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLN 780
            G    L  L  L+ + C+ +  + P    N+  L+ L L + +   LP+SI  L  L N
Sbjct: 672 PGDIHKLKHLLTLHCSGCSKLT-SFPKIKCNIGKLEVLSLDETAIKELPSSIELLEGLRN 730

Query: 781 IELEDCKRLQSLPQLPPNIRQVRV---NGCASLVTLLDALKLCKSDSTMIACLDSLKL 835
           + L++CK L+ LP    N+R + V    GC+ L  L + L+        + CL+ L L
Sbjct: 731 LYLDNCKNLEGLPNSICNLRFLEVLSLEGCSKLDRLPEDLE-------RMPCLEVLSL 781


>gi|359493291|ref|XP_002273385.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1110

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 272/705 (38%), Positives = 415/705 (58%), Gaps = 49/705 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D R E+L+ L+  GS DVRM+G+ G+GG+GKTTIARV+Y+ IS++F+ + FL +V + S
Sbjct: 192 IDGRLEELKSLIGIGSYDVRMLGVWGLGGIGKTTIARVIYNSISYQFDGASFLPSVCQQS 251

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
               + +++++LL  +  L+   + NV +G++   +++++KK+L+V+DDV  + QL+ L 
Sbjct: 252 ----MPNVKKKLLCDITGLSYGGL-NVDEGLNK--NKIKKKKILIVVDDVDCLSQLKDLV 304

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            N +W G GSRIIIT+RD+HLL  HGVD +Y+  GL++ E++ LFN+ AF+   P     
Sbjct: 305 PNGDWLGGGSRIIITTRDKHLLLEHGVDAIYEVQGLDFAESIHLFNLYAFQARFPKPAYR 364

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
             S  I+ Y+ GLPLAL+V G FL  +S+DEW S L +L+ +   EI D+ QIS+D L  
Sbjct: 365 GFSRNIVNYSEGLPLALKVFGDFLFRKSIDEWESALYKLKHQSMKEIQDVFQISYDRLDY 424

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             K IFLDIACFFKG +R++V+  L+G        I  L  K L+T  NN + MH LLQ+
Sbjct: 425 KTKDIFLDIACFFKGEEREFVSRILDGAE----KAITDLSNKSLLTFSNNKIMMHPLLQQ 480

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHE---------- 350
           +GQ +V +  P+E GK+SRLW+ E+V  +L ++ GT+ +EGI LD    E          
Sbjct: 481 MGQGVVHQACPQEPGKQSRLWRSEDVHRILLKNEGTDAIEGIFLDTSPAEPIEFTILDTS 540

Query: 351 NEVYLCASAKAFSKMTNLRLLKIC------------NLQLPNGLEYLSNRLRLLGWRGYP 398
             V +  + +AF  M  LRLLK+C             +++    E+ S  LR L W GYP
Sbjct: 541 PAVPIEFTTEAFKMMNKLRLLKVCRGHKCGSMVKNYEVRVSTNFEFPSYELRYLHWDGYP 600

Query: 399 LKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLE 458
           L++LPSN   +  +E+ + YS++  LW+G+K L+KLKV+ LSHS+ LI++PDF+  PNLE
Sbjct: 601 LEYLPSNFHGENLVELNLRYSKLRVLWQGLKPLEKLKVINLSHSQQLIQIPDFSDTPNLE 660

Query: 459 KLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPG-KILMKSLEKL------NLKS 511
            LIL+GCT L  I  S+   + L+ L++  C+ L  L      + SLE L      NLKS
Sbjct: 661 SLILKGCTNLENIPSSIWHLDSLVNLDLSHCSKLQELAEIPWNLYSLEYLNLASCKNLKS 720

Query: 512 LPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVL 571
           LP ++  LKCL TL+V G  K    P+ +  +E L +L+   + +   P S   L+GL  
Sbjct: 721 LPESLCNLKCLKTLNVIGCSK---LPDNLGSLECLEKLYASSSELIS-PQSDSSLAGLCS 776

Query: 572 LNLKNCRSLEILPVTVS----NLKCLRSLKLSGCS-KLKKFPEIVRSMKDLSELFLDGTS 626
           L + +     ++   +S    +L  L  L LS C+   K+ P+ +  +  L  L L G  
Sbjct: 777 LKVLDMHDTNLMQRAISGDIGSLYSLEELNLSYCNLTEKEIPDDICCLYSLRVLDLSGNL 836

Query: 627 IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSG 671
              V  +I  L++L  L L  CK+L+ +P    +L+ L   + +G
Sbjct: 837 FLGVTDAISQLSELRELGLRHCKSLLEIPKLPSSLRVLDAHDCTG 881



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 133/381 (34%), Positives = 199/381 (52%), Gaps = 33/381 (8%)

Query: 542 HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
           H E+L EL+L  + +R L   ++ L  L ++NL + + L  +P   S+   L SL L GC
Sbjct: 609 HGENLVELNLRYSKLRVLWQGLKPLEKLKVINLSHSQQLIQIP-DFSDTPNLESLILKGC 667

Query: 602 SKLKKFPEIVRSMKDLSELFLDGTS----IKEVPSSIELLTKLELLNLSDCKNLVRLPSS 657
           + L+  P  +  +  L  L L   S    + E+P +   L  LE LNL+ CKNL  LP S
Sbjct: 668 TNLENIPSSIWHLDSLVNLDLSHCSKLQELAEIPWN---LYSLEYLNLASCKNLKSLPES 724

Query: 658 IIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV--PHSTSWYSYI------- 708
           +  LK LKTLN+ GC KL   P+ LG +E LE+L  S + +  P S S  + +       
Sbjct: 725 LCNLKCLKTLNVIGCSKL---PDNLGSLECLEKLYASSSELISPQSDSSLAGLCSLKVLD 781

Query: 709 --PINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFV 766
               NLM+++++  + SL    SL +LNL+ CNL E  +P DI  L SL+ L LS N F+
Sbjct: 782 MHDTNLMQRAISGDIGSLY---SLEELNLSYCNLTEKEIPDDICCLYSLRVLDLSGNLFL 838

Query: 767 SLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTM 826
            +  +I+ LS+L  + L  CK L  +P+LP ++R +  + C  + TL     L       
Sbjct: 839 GVTDAISQLSELRELGLRHCKSLLEIPKLPSSLRVLDAHDCTGIKTLSSTSVL--QWQWQ 896

Query: 827 IACLDSLKLLGNKSLAFSMLREYLEAVSN-TRQHLSVVVPGS-EIPEWFMYQNEGSSITV 884
           + C  S  L   + + +   R  L   +N   Q  S V+PGS E+PEW  +Q  G+ + V
Sbjct: 897 LNCFKSAFLQEIQEMKY---RRLLSLPANGVSQGFSTVIPGSGELPEWIQHQGVGNEVIV 953

Query: 885 TRPSNLYNKKKLVGYAICCVF 905
             P N Y+ K  +G A+CCV+
Sbjct: 954 PLPPNWYD-KDFLGLALCCVY 973


>gi|359477823|ref|XP_002282797.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1400

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 266/659 (40%), Positives = 388/659 (58%), Gaps = 53/659 (8%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EKL+ LM++  + V ++GI G+GG+GKTTIA+ +Y+  S +++   FL N+RE  SKG +
Sbjct: 204 EKLKSLMNTKLNMVSVVGIYGIGGVGKTTIAKAIYNETSDQYDGRSFLRNIRE-RSKGDI 262

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
           + LQ++LL  +L+  +  I NV +GI M+   L   +VL++ DDV ++KQL+ LA  ++W
Sbjct: 263 LQLQQELLHGILRGKNFKINNVDEGISMIKRCLTSNRVLVIFDDVDELKQLEYLAEEKDW 322

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSAR 185
           F + S IIIT+RD+H+L  +G D  Y+   LN +EA +LF++ AFK  +P +    LS  
Sbjct: 323 FHAKSTIIITTRDKHVLAQYGADIPYEVSKLNKEEATELFSLWAFKQNRPQEVYKNLSYN 382

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           II YA GLPLAL+V+G+ L G+ +  W S L +L+I P  EI ++L+ISFDGL +++K +
Sbjct: 383 IIDYANGLPLALKVIGASLFGKKISHWESALCKLKIIPHKEIHNVLRISFDGLDDIDKGM 442

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQI 305
           FLD+ACFFKG+D+D+V+  L   G H    I  L ++CLIT+  N L MHDL+Q +G ++
Sbjct: 443 FLDVACFFKGDDKDFVSRIL---GPHAEHVITTLADRCLITISKNMLDMHDLIQLMGWEV 499

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKM 365
           ++++ PE+ G+RSRLW +    HVL  +TGT  +EG+ LD     N   L  + K+F +M
Sbjct: 500 IRQECPEDPGRRSRLW-DSNAYHVLIGNTGTRAIEGLFLDRCKF-NLSQL--TTKSFKEM 555

Query: 366 TNLRLLKICNLQ--------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
             LRLLKI N +        LP   E+ S  L  L W  YPL+ LP N      +E+ + 
Sbjct: 556 NRLRLLKIHNPRRKLFLEDHLPRDFEFSSYELTYLHWDRYPLESLPLNFHAKNLVELLLR 615

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
            S I +LW+G K  DKL+V+ LS+S +LIR+PDF+  PNLE L LEGCT           
Sbjct: 616 NSNIKQLWRGNKLHDKLRVIDLSYSVHLIRIPDFSSVPNLEILTLEGCT----------- 664

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
                   M  C                 +NL+ LP  I   K L TL  +G  K   FP
Sbjct: 665 --------MHGC-----------------VNLERLPRGIYKWKHLQTLSCNGCSKLERFP 699

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
           EI  +M  L  L L GTAI  LP SI  L+GL  L L+ C  L  +P+ + +L  L  L 
Sbjct: 700 EIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECAKLHKIPIHICHLSSLEVLD 759

Query: 598 LSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           L  C+ ++   P  +  +  L +L L+      +P++I  L++LE+LNLS C NL ++P
Sbjct: 760 LGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCSNLEQIP 818



 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 162/331 (48%), Gaps = 61/331 (18%)

Query: 572  LNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP 631
            L L  C++L  LP  + N K L +L  SGCS+L+ FP+I++ M+ L  L+LDGT+IKE+P
Sbjct: 1122 LCLLGCKNLTSLPSGICNFKSLATLCCSGCSQLESFPDILQDMESLRNLYLDGTAIKEIP 1181

Query: 632  SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
            SSIE L  L+   L++C NLV LP SI  L SL+ L +  C     +P+ LG+++SL +L
Sbjct: 1182 SSIERLRGLQHFTLTNCINLVNLPDSICNLTSLRKLRVERCPNFRKLPDNLGRLQSLLQL 1241

Query: 692  DISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGN 751
             +                      S+  +LPSLSGLCSLR L L  CN+ E  +PS+I +
Sbjct: 1242 SVGHL------------------DSMNFQLPSLSGLCSLRTLMLHACNIRE--IPSEIFS 1281

Query: 752  LCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLV 811
            L SL+ L L+ N F  +P  I+ L  L  ++L  CK LQ +P+LP  +R+ ++      V
Sbjct: 1282 LSSLERLCLAGNHFSRIPDGISQLYNLTFLDLSHCKMLQHIPELPSGVRRHKIQR----V 1337

Query: 812  TLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPE 871
              +   K                                      R   + +   + IPE
Sbjct: 1338 IFVQGCKY-------------------------------------RNVTTFIAESNGIPE 1360

Query: 872  WFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
            W  +Q  G  IT+  P + Y     +G  +C
Sbjct: 1361 WISHQKSGFKITMKLPWSWYENDDFLGVVLC 1391



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 147/282 (52%), Gaps = 21/282 (7%)

Query: 630 VPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLE 689
           VP+ +E+LT LE   +  C NL RLP  I   K L+TL+ +GC KLE  PE  G +  L 
Sbjct: 652 VPN-LEILT-LEGCTMHGCVNLERLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRELR 709

Query: 690 ELDISGTAV---PHSTSWYSYIPINLMRKSVAL-KLP-SLSGLCSLRKLNLTDCNLMEGA 744
            LD+SGTA+   P S +  + +   L+++   L K+P  +  L SL  L+L  CN+MEG 
Sbjct: 710 VLDLSGTAIMDLPSSITHLNGLQTLLLQECAKLHKIPIHICHLSSLEVLDLGHCNIMEGG 769

Query: 745 LPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRV 804
           +PSDI +L SL++L L +  F S+PT+I  LS+L  + L  C  L+ +P+LP  +R +  
Sbjct: 770 IPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCSNLEQIPELPSRLRLLDA 829

Query: 805 NGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVV 864
           +G     +    L L     +++ C   ++   +K  +FS    + +          + +
Sbjct: 830 HGSNRTSSRAPFLPL----HSLVNCFSRVQ--DSKRTSFSDSFYHGKGT-------CIFL 876

Query: 865 PGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
           PG + IP+  M +          P N +   + +G+AI CV+
Sbjct: 877 PGGDVIPKGIMDRTNRHFERTELPQNWHQNNEFLGFAIFCVY 918



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 103/197 (52%), Gaps = 25/197 (12%)

Query: 508  NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
            NL SLP+ I   K L+TL  SG  +   FP+I++ ME L  L+L+GTAI+ +P SIE L 
Sbjct: 1129 NLTSLPSGICNFKSLATLCCSGCSQLESFPDILQDMESLRNLYLDGTAIKEIPSSIERLR 1188

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSE-------- 619
            GL    L NC +L  LP ++ NL  LR L++  C   +K P+ +  ++ L +        
Sbjct: 1189 GLQHFTLTNCINLVNLPDSICNLTSLRKLRVERCPNFRKLPDNLGRLQSLLQLSVGHLDS 1248

Query: 620  ----------------LFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
                            L L   +I+E+PS I  L+ LE L L+   +  R+P  I  L +
Sbjct: 1249 MNFQLPSLSGLCSLRTLMLHACNIREIPSEIFSLSSLERLCLAG-NHFSRIPDGISQLYN 1307

Query: 664  LKTLNLSGCFKLENVPE 680
            L  L+LS C  L+++PE
Sbjct: 1308 LTFLDLSHCKMLQHIPE 1324



 Score = 53.1 bits (126), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 115/279 (41%), Gaps = 40/279 (14%)

Query: 443  ENLIRMPD-FTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI-L 500
            +NL  +P       +L  L   GC++L E  P +L   + +     D T++  +P  I  
Sbjct: 1128 KNLTSLPSGICNFKSLATLCCSGCSQL-ESFPDILQDMESLRNLYLDGTAIKEIPSSIER 1186

Query: 501  MKSLEK------LNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT 554
            ++ L+       +NL +LP +I  L  L  L V     FR+ P+                
Sbjct: 1187 LRGLQHFTLTNCINLVNLPDSICNLTSLRKLRVERCPNFRKLPD---------------- 1230

Query: 555  AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
                   ++  L  L+ L++ +  S+     ++S L  LR+L L  C+ +++ P  + S+
Sbjct: 1231 -------NLGRLQSLLQLSVGHLDSMNFQLPSLSGLCSLRTLMLHACN-IREIPSEIFSL 1282

Query: 615  KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK---NLVRLPSSIIALKSLKTLNLSG 671
              L  L L G     +P  I  L  L  L+LS CK   ++  LPS +   K  + + + G
Sbjct: 1283 SSLERLCLAGNHFSRIPDGISQLYNLTFLDLSHCKMLQHIPELPSGVRRHKIQRVIFVQG 1342

Query: 672  CFKLENVPETLGQIESLEEL---DISGTAVPHSTSWYSY 707
            C K  NV   + +   + E      SG  +     W  Y
Sbjct: 1343 C-KYRNVTTFIAESNGIPEWISHQKSGFKITMKLPWSWY 1380



 Score = 45.4 bits (106), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 23/208 (11%)

Query: 399  LKFLPSNLQ-MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPN 456
            L+  P  LQ M+    +Y+  + I E+   I+ L  L+   L++  NL+ +PD      +
Sbjct: 1154 LESFPDILQDMESLRNLYLDGTAIKEIPSSIERLRGLQHFTLTNCINLVNLPDSICNLTS 1213

Query: 457  LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
            L KL +E C    ++ P           N+    SL+ L     +  L+ +N + LP ++
Sbjct: 1214 LRKLRVERCPNFRKL-PD----------NLGRLQSLLQLS----VGHLDSMNFQ-LP-SL 1256

Query: 517  SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
            SGL  L TL +      RE P  +  +  L  L L G     +P  I  L  L  L+L +
Sbjct: 1257 SGLCSLRTLMLHA-CNIREIPSEIFSLSSLERLCLAGNHFSRIPDGISQLYNLTFLDLSH 1315

Query: 577  CRSLEI---LPVTVSNLKCLRSLKLSGC 601
            C+ L+    LP  V   K  R + + GC
Sbjct: 1316 CKMLQHIPELPSGVRRHKIQRVIFVQGC 1343


>gi|451798980|gb|AGF69188.1| TMV resistance protein N-like protein 2 [Vitis labrusca]
          Length = 1386

 Score =  421 bits (1082), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 266/659 (40%), Positives = 388/659 (58%), Gaps = 53/659 (8%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EKL+ LM++  + V ++GI G+GG+GKTTIA+ +Y+  S +++   FL N+RE  SKG +
Sbjct: 190 EKLKSLMNTKLNMVSVVGIYGIGGVGKTTIAKAIYNETSDQYDGRSFLRNIRE-RSKGDI 248

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
           + LQ++LL  +L+  +  I NV +GI M+   L   +VL++ DDV ++KQL+ LA  ++W
Sbjct: 249 LQLQQELLHGILRGKNFKINNVDEGISMIKRCLTSNRVLVIFDDVDELKQLEYLAEEKDW 308

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSAR 185
           F + S IIIT+RD+H+L  +G D  Y+   LN +EA +LF++ AFK  +P +    LS  
Sbjct: 309 FHAKSTIIITTRDKHVLAQYGADIPYEVSKLNKEEATELFSLWAFKQNRPQEVYKNLSYN 368

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           II YA GLPLAL+V+G+ L G+ +  W S L +L+I P  EI ++L+ISFDGL +++K +
Sbjct: 369 IIDYANGLPLALKVIGASLFGKKISHWESALCKLKIIPHKEIHNVLRISFDGLDDIDKGM 428

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQI 305
           FLD+ACFFKG+D+D+V+  L   G H    I  L ++CLIT+  N L MHDL+Q +G ++
Sbjct: 429 FLDVACFFKGDDKDFVSRIL---GPHAEHVITTLADRCLITISKNMLDMHDLIQLMGWEV 485

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKM 365
           ++++ PE+ G+RSRLW +    HVL  +TGT  +EG+ LD     N   L  + K+F +M
Sbjct: 486 IRQECPEDPGRRSRLW-DSNAYHVLIGNTGTRAIEGLFLDRCKF-NLSQL--TTKSFKEM 541

Query: 366 TNLRLLKICNLQ--------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
             LRLLKI N +        LP   E+ S  L  L W  YPL+ LP N      +E+ + 
Sbjct: 542 NRLRLLKIHNPRRKLFLEDHLPRDFEFSSYELTYLHWDRYPLESLPLNFHAKNLVELLLR 601

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
            S I +LW+G K  DKL+V+ LS+S +LIR+PDF+  PNLE L LEGCT           
Sbjct: 602 NSNIKQLWRGNKLHDKLRVIDLSYSVHLIRIPDFSSVPNLEILTLEGCT----------- 650

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
                   M  C                 +NL+ LP  I   K L TL  +G  K   FP
Sbjct: 651 --------MHGC-----------------VNLERLPRGIYKWKHLQTLSCNGCSKLERFP 685

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
           EI  +M  L  L L GTAI  LP SI  L+GL  L L+ C  L  +P+ + +L  L  L 
Sbjct: 686 EIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECAKLHKIPIHICHLSSLEVLD 745

Query: 598 LSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           L  C+ ++   P  +  +  L +L L+      +P++I  L++LE+LNLS C NL ++P
Sbjct: 746 LGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCSNLEQIP 804



 Score =  169 bits (428), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 162/331 (48%), Gaps = 61/331 (18%)

Query: 572  LNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP 631
            L L  C++L  LP  + N K L +L  SGCS+L+ FP+I++ M+ L  L+LDGT+IKE+P
Sbjct: 1108 LCLLGCKNLTSLPSGICNFKSLATLCCSGCSQLESFPDILQDMESLRNLYLDGTAIKEIP 1167

Query: 632  SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
            SSIE L  L+   L++C NLV LP SI  L SL+ L +  C     +P+ LG+++SL +L
Sbjct: 1168 SSIERLRGLQHFTLTNCINLVNLPDSICNLTSLRKLRVERCPNFRKLPDNLGRLQSLLQL 1227

Query: 692  DISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGN 751
             +                      S+  +LPSLSGLCSLR L L  CN+ E  +PS+I +
Sbjct: 1228 SVGHL------------------DSMNFQLPSLSGLCSLRTLMLHACNIRE--IPSEIFS 1267

Query: 752  LCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLV 811
            L SL+ L L+ N F  +P  I+ L  L  ++L  CK LQ +P+LP  +R+ ++      V
Sbjct: 1268 LSSLERLCLAGNHFSRIPDGISQLYNLTFLDLSHCKMLQHIPELPSGVRRHKIQR----V 1323

Query: 812  TLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPE 871
              +   K                                      R   + +   + IPE
Sbjct: 1324 IFVQGCKY-------------------------------------RNVTTFIAESNGIPE 1346

Query: 872  WFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
            W  +Q  G  IT+  P + Y     +G  +C
Sbjct: 1347 WISHQKSGFKITMKLPWSWYENDDFLGVVLC 1377



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 147/282 (52%), Gaps = 21/282 (7%)

Query: 630 VPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLE 689
           VP+ +E+LT LE   +  C NL RLP  I   K L+TL+ +GC KLE  PE  G +  L 
Sbjct: 638 VPN-LEILT-LEGCTMHGCVNLERLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRELR 695

Query: 690 ELDISGTAV---PHSTSWYSYIPINLMRKSVAL-KLP-SLSGLCSLRKLNLTDCNLMEGA 744
            LD+SGTA+   P S +  + +   L+++   L K+P  +  L SL  L+L  CN+MEG 
Sbjct: 696 VLDLSGTAIMDLPSSITHLNGLQTLLLQECAKLHKIPIHICHLSSLEVLDLGHCNIMEGG 755

Query: 745 LPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRV 804
           +PSDI +L SL++L L +  F S+PT+I  LS+L  + L  C  L+ +P+LP  +R +  
Sbjct: 756 IPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCSNLEQIPELPSRLRLLDA 815

Query: 805 NGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVV 864
           +G     +    L L     +++ C   ++   +K  +FS    + +          + +
Sbjct: 816 HGSNRTSSRAPFLPL----HSLVNCFSRVQ--DSKRTSFSDSFYHGKGT-------CIFL 862

Query: 865 PGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
           PG + IP+  M +          P N +   + +G+AI CV+
Sbjct: 863 PGGDVIPKGIMDRTNRHFERTELPQNWHQNNEFLGFAIFCVY 904



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 103/197 (52%), Gaps = 25/197 (12%)

Query: 508  NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
            NL SLP+ I   K L+TL  SG  +   FP+I++ ME L  L+L+GTAI+ +P SIE L 
Sbjct: 1115 NLTSLPSGICNFKSLATLCCSGCSQLESFPDILQDMESLRNLYLDGTAIKEIPSSIERLR 1174

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSE-------- 619
            GL    L NC +L  LP ++ NL  LR L++  C   +K P+ +  ++ L +        
Sbjct: 1175 GLQHFTLTNCINLVNLPDSICNLTSLRKLRVERCPNFRKLPDNLGRLQSLLQLSVGHLDS 1234

Query: 620  ----------------LFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
                            L L   +I+E+PS I  L+ LE L L+   +  R+P  I  L +
Sbjct: 1235 MNFQLPSLSGLCSLRTLMLHACNIREIPSEIFSLSSLERLCLAG-NHFSRIPDGISQLYN 1293

Query: 664  LKTLNLSGCFKLENVPE 680
            L  L+LS C  L+++PE
Sbjct: 1294 LTFLDLSHCKMLQHIPE 1310



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 115/279 (41%), Gaps = 40/279 (14%)

Query: 443  ENLIRMPD-FTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI-L 500
            +NL  +P       +L  L   GC++L E  P +L   + +     D T++  +P  I  
Sbjct: 1114 KNLTSLPSGICNFKSLATLCCSGCSQL-ESFPDILQDMESLRNLYLDGTAIKEIPSSIER 1172

Query: 501  MKSLEK------LNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT 554
            ++ L+       +NL +LP +I  L  L  L V     FR+ P+                
Sbjct: 1173 LRGLQHFTLTNCINLVNLPDSICNLTSLRKLRVERCPNFRKLPD---------------- 1216

Query: 555  AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
                   ++  L  L+ L++ +  S+     ++S L  LR+L L  C+ +++ P  + S+
Sbjct: 1217 -------NLGRLQSLLQLSVGHLDSMNFQLPSLSGLCSLRTLMLHACN-IREIPSEIFSL 1268

Query: 615  KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK---NLVRLPSSIIALKSLKTLNLSG 671
              L  L L G     +P  I  L  L  L+LS CK   ++  LPS +   K  + + + G
Sbjct: 1269 SSLERLCLAGNHFSRIPDGISQLYNLTFLDLSHCKMLQHIPELPSGVRRHKIQRVIFVQG 1328

Query: 672  CFKLENVPETLGQIESLEEL---DISGTAVPHSTSWYSY 707
            C K  NV   + +   + E      SG  +     W  Y
Sbjct: 1329 C-KYRNVTTFIAESNGIPEWISHQKSGFKITMKLPWSWY 1366



 Score = 45.4 bits (106), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 23/208 (11%)

Query: 399  LKFLPSNLQ-MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPN 456
            L+  P  LQ M+    +Y+  + I E+   I+ L  L+   L++  NL+ +PD      +
Sbjct: 1140 LESFPDILQDMESLRNLYLDGTAIKEIPSSIERLRGLQHFTLTNCINLVNLPDSICNLTS 1199

Query: 457  LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
            L KL +E C    ++ P           N+    SL+ L     +  L+ +N + LP ++
Sbjct: 1200 LRKLRVERCPNFRKL-PD----------NLGRLQSLLQLS----VGHLDSMNFQ-LP-SL 1242

Query: 517  SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
            SGL  L TL +      RE P  +  +  L  L L G     +P  I  L  L  L+L +
Sbjct: 1243 SGLCSLRTLMLHA-CNIREIPSEIFSLSSLERLCLAGNHFSRIPDGISQLYNLTFLDLSH 1301

Query: 577  CRSLEI---LPVTVSNLKCLRSLKLSGC 601
            C+ L+    LP  V   K  R + + GC
Sbjct: 1302 CKMLQHIPELPSGVRRHKIQRVIFVQGC 1329


>gi|297819854|ref|XP_002877810.1| hypothetical protein ARALYDRAFT_323710 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297323648|gb|EFH54069.1| hypothetical protein ARALYDRAFT_323710 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1251

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 339/1055 (32%), Positives = 526/1055 (49%), Gaps = 103/1055 (9%)

Query: 3    SRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK 62
            S+  K+  L+      VR IGI GM G+GKTT+A+  +D +S ++EAS F+ +  +   +
Sbjct: 164  SKLGKIETLIYKQPWGVRSIGIWGMPGIGKTTLAKAAFDQLSGDYEASCFIRDFHKAFHE 223

Query: 63   GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGN 122
             GL  L      ++L+  +  I +      +L + L+ K+VL+V+DDV      +S  G 
Sbjct: 224  KGLYGLLEVHFGKILR-EELGINSSITRPILLTNVLRHKRVLVVLDDVCKPLDAESFLGG 282

Query: 123  REWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQL 182
             +WF  GS IIITSRD+ +     V+++Y+  GLN +EALQLF+  AF      +   +L
Sbjct: 283  FDWFCPGSLIIITSRDKQVFSLCRVNQIYEVPGLNEEEALQLFSRCAFGKDIRNETLQKL 342

Query: 183  SARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELE 242
            S ++I YA G PL L   G  +S  +      T  +L+     EI D ++ ++D L   E
Sbjct: 343  SMKVINYANGNPLVLTFFGC-MSRENPRLREMTFLKLKKYLAHEIHDAVKSTYDSLSSNE 401

Query: 243  KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELG 302
            K IFLDIAC F+G + D V + LEGCGF   + I VL+EKCL+++    + MH+L+Q +G
Sbjct: 402  KNIFLDIACLFRGENVDCVMHLLEGCGFFSRVEINVLVEKCLVSIAEGRVVMHNLIQSIG 461

Query: 303  QQIVQRQSPEELGKRSRLWKEEEVCHVL--TESTGTELVEGIVLDNYHHENEVYLCASAK 360
             +I+         +RSRLWK   + + L  T+  G+E +E I LD     + +    +  
Sbjct: 462  HEIINGGK-----RRSRLWKPSRIKYFLEDTQVLGSEDIEAIYLD----PSALSFDVNPL 512

Query: 361  AFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
            AF  M NLR LKI +        L LP G++ L   LRLL W  +PL  LP +      +
Sbjct: 513  AFENMYNLRYLKIFSSNPGNHSALHLPKGVKSLPEELRLLHWEQFPLLSLPQDFNTRNLV 572

Query: 413  EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
             + MCYS+I  LW+G K L  LK ++L HS+ L+ + +   A N+E + L+GC RL    
Sbjct: 573  ILNMCYSKIQRLWEGTKELGMLKRIMLCHSQQLVDIQELQNARNIEVIDLQGCARLQRFI 632

Query: 473  PSLLLHNKLIILNMKDC---TSLITLPGKILMKSLEKLNLKSLPTTISG----------- 518
             +    + L ++N+  C    S   +P  I    L++  L+S+PT I             
Sbjct: 633  ATGHFQH-LRVINLSGCIKIKSFPEVPPNIEELYLKQTGLRSIPTVIFSPQDNSFIYDHQ 691

Query: 519  ---------------------LKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIR 557
                                 LK L  LD+S  L   +   I    ++L +L+L GTAI+
Sbjct: 692  DHKFLNREVSSESQSLSIMVYLKYLKVLDLSHCLGLEDIHGIP---KNLRKLYLGGTAIQ 748

Query: 558  GLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDL 617
             LP S+  LS LV+L+L+NC+ LE LP+ + NL  L  L LSGCS+L+    I R   +L
Sbjct: 749  ELP-SLMHLSELVVLDLENCKRLEKLPMGIGNLSSLAVLNLSGCSELEDIQGIPR---NL 804

Query: 618  SELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLS--GCFKL 675
             EL+L GT+I+EVPSSI+ L++L +L+L +CK L  LP  I  LKSL TL L+      +
Sbjct: 805  EELYLAGTAIQEVPSSIKHLSELVVLDLQNCKRLRHLPMEIGNLKSLVTLKLTDPSGMSI 864

Query: 676  ENVPETLGQIESLEELDISG------TAVPHSTSWYSYIPINLMRKSVALKLPSLSGLC- 728
              V  ++ Q   + E++IS       T   ++     ++P   +  S      SL GL  
Sbjct: 865  REVSTSIIQ-NGISEINISNLNYLLFTVNENADQRREHLPQPRLPSS------SLHGLVP 917

Query: 729  ---SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELED 785
               +L  L+L + +LM   +P +I +L S+  L L +N F  +P SI  LSKL ++ L  
Sbjct: 918  RFYALVSLSLFNASLMH--IPEEICSLPSVVLLDLGRNGFSKIPESIKQLSKLHSLRLRH 975

Query: 786  CKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSM 845
            C+ L SLP LP +++ + V+GC SL ++    +   S  T   C +    +  K +   +
Sbjct: 976  CRNLISLPVLPQSLKLLNVHGCVSLESVSWGFEQFPSHYTFSDCFNRSPKVARKRVVKGL 1035

Query: 846  LREYLEAVSNTRQH-----LSVVVPGSEIPEWFMYQ-NEGSSITVTRPSNLYNKKKLVGY 899
             +  + ++ N RQ      L+  + G+   +   Y    G   T+    +L  +K L+G+
Sbjct: 1036 AK--VASIGNERQQELIKALAFSICGAGADQTSSYNLRAGPFATIEITPSL--RKTLLGF 1091

Query: 900  AICCVFHVLKNSRGN-----NCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLY 954
            AI  V     +S  N      C   + T +   H    ++      +  +   DH+++ Y
Sbjct: 1092 AIFIVVTFSDDSHNNAGLGVRCVSRWKTKKRVSHRAEKVFRCWAPREAPEVQRDHMFVFY 1151

Query: 955  LSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQ 989
               +T    R   E N     SNHV   F+   G+
Sbjct: 1152 EDAETH---RGGGEGNKPNLSSNHVEFEFQAVNGR 1183


>gi|356514965|ref|XP_003526172.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1518

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 335/986 (33%), Positives = 481/986 (48%), Gaps = 173/986 (17%)

Query: 17   SDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQL 76
            SDVR++GICGMGG+GKTT+AR +Y+ IS++++   F+D+V+EI  K G + +Q+QLLSQ 
Sbjct: 502  SDVRVVGICGMGGIGKTTLARALYEKISYQYDFHCFVDDVKEIYKKIGSLGVQKQLLSQC 561

Query: 77   LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWF-----GSGSR 131
            +   +  I N   G  ++G+RL+ K+ L+V+D+V  V+QL    G+RE       G GSR
Sbjct: 562  VNDKNIEICNASKGTYLIGTRLRNKRGLIVLDNVSRVEQLHMFTGSRETLLRECVGGGSR 621

Query: 132  IIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAG 191
            II+ SRDEH+L+THGV+ VY+   LN D A+QLF   AFK    L     L+  ++ +A 
Sbjct: 622  IIVISRDEHILRTHGVNHVYQVKPLNQDNAVQLFCKNAFKCDYILSGYKMLTHDVLSHAQ 681

Query: 192  GLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIAC 251
            G PLA++V+G+FL GR+V +W+STL RL      +I+ +L+IS+D L+E +K+IFLDIAC
Sbjct: 682  GHPLAIQVIGNFLQGRNVSQWKSTLVRLNEIKSEDIMKVLRISYDDLEEKDKEIFLDIAC 741

Query: 252  FF------KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQI 305
            FF      K ++R YV   L+  GF+P IG+ +L++K LIT+ +  ++MH LL++LG+ I
Sbjct: 742  FFSRDYSYKYSER-YVKEILDFRGFNPEIGLPILVDKSLITISHGKIYMHRLLRDLGKCI 800

Query: 306  VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL----CASAKA 361
            V+ +SP+E    SRLW  +++  VL+ +   + +E IV+     E++ ++         A
Sbjct: 801  VREKSPKEPRNWSRLWDWKDLYEVLSNNMKAKNLEAIVV-----EDKTWMFFETTMRVDA 855

Query: 362  FSKMTNLRLLKICNL-QLPNGLEYLS-NRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
             SKM NL+LL      +    L Y+S N+L  L W  YP  FLP   Q    IE+ +  S
Sbjct: 856  LSKMKNLKLLMFPEYTKFSGNLNYVSNNKLGYLIWPYYPFNFLPQCFQPHNLIELDLSRS 915

Query: 420  RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
             I  LW   + + KL+ + LS S  L+++PDF    NL +L LEGC +L +IHPS+    
Sbjct: 916  NIQHLWDSTQPIPKLRRLNLSLSA-LVKLPDFAEDLNLRQLNLEGCEQLRQIHPSIGHLT 974

Query: 480  KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
            KL +LN+KDC SL+ LP                             D + DL  R     
Sbjct: 975  KLEVLNLKDCKSLVKLP-----------------------------DFAEDLNLR----- 1000

Query: 540  VEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKL 598
                    EL+LEG   +R +  SI  L+ LV LNLK+C+SLE LP  +  L  L+ L L
Sbjct: 1001 --------ELNLEGCEQLRQIHPSIGHLTKLVKLNLKDCKSLESLPNNILRLSSLQYLSL 1052

Query: 599  SGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPS---SIELLTKLEL--------LNLSD 647
             GCSKL     I  S +      L    I E PS   SI    K  L         +L D
Sbjct: 1053 FGCSKLYN---IRSSEEQRGAGHLKKLRIGEAPSRSQSIFSFFKKGLPWPSVAFDKSLED 1109

Query: 648  C-KNLVR--LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSW 704
              K+ VR  LPS  I    ++ L+LS C  L  +P+     + LEEL + G         
Sbjct: 1110 AHKDSVRCLLPSLPI-FPCMRELDLSFC-NLLKIPDAFVNFQCLEELYLMGNNFE----- 1162

Query: 705  YSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNS 764
                            LPSL  L  L  LNL  C  ++            L EL    + 
Sbjct: 1163 ---------------TLPSLKELSKLLHLNLQHCKRLK-----------YLPELPSRTDL 1196

Query: 765  FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDS 824
            F    T++      L + + +C  L    + P N                     C S  
Sbjct: 1197 FWWNWTTVDDYEYGLGLNIFNCPELAERDRCPNN---------------------CFSWM 1235

Query: 825  TMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQN--EGSSI 882
              IA  D L L+                       +S ++PGSEIP WF  Q+   G+ I
Sbjct: 1236 MQIAHPDLLPLV---------------------PPISSIIPGSEIPSWFEKQHLGMGNVI 1274

Query: 883  TVTRPSNLYNKKKLVGYAICCVFHVLKNSR------------GNNCFGSYPTHQLNCHIG 930
             + R   + + K  +G A+  +F V K  R               C  S P  Q      
Sbjct: 1275 NIGRSHFMQHYKNWIGLALSVIFVVHKERRIPPPDMEQPSILSITCGPSIPPQQRKKERP 1334

Query: 931  HGIYGIGFRDKFGQAGSDHLWLLYLS 956
                 + FR+      SDHLWL Y +
Sbjct: 1335 SPYIPVLFREDLVTDESDHLWLFYFT 1360


>gi|449438044|ref|XP_004136800.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 996

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 282/731 (38%), Positives = 409/731 (55%), Gaps = 74/731 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++SR + L   +  GS+DVR +GI GMGGLGKTT+A+ +Y+ + H FEA  FL N++  +
Sbjct: 195 IESRLKLLLSHLHIGSNDVRFVGILGMGGLGKTTVAKALYNQLYHNFEAKCFLSNIKAET 254

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           S   L+ LQ+QLLS +    + ++ N+  GI +L  RL+ K++LL++DDV D+ QL +LA
Sbjct: 255 S--NLIHLQKQLLSSITNSTNINLGNIDQGIAVLQERLRCKRLLLILDDVDDLSQLTALA 312

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
             R+ F SGSRIIIT+RD HLL    VDE+     ++ DEAL+LF+  AF+   P +   
Sbjct: 313 TTRDLFASGSRIIITTRDRHLLNQLEVDEICSIDEMDDDEALELFSWHAFRNSYPSETFH 372

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           QLS ++I Y GGLPLALEVLGSFL GRS +EW  TL++L+  P  +I   L+ISFDGL +
Sbjct: 373 QLSKQVITYCGGLPLALEVLGSFLFGRSREEWEDTLKKLKKIPNDQIQKKLKISFDGLND 432

Query: 241 -LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLL 298
              K IFLD++CFF G +R+YV   L+GCGF P IGI VL+++CL+T+ + N L MHDLL
Sbjct: 433 HTYKDIFLDVSCFFIGMERNYVEQILDGCGFFPRIGISVLLQRCLLTIGDKNRLMMHDLL 492

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           +++G++IV+   P+   + SRL+  EEV  VLT   GT+  EG+ L       +     S
Sbjct: 493 RDMGREIVRENFPKYPERHSRLFLHEEVLSVLTRQKGTDATEGLSLKLPRFSKQKL---S 549

Query: 359 AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
            KAF++M  LRLL++  + +    +++S  +R + W G+PLKFLP    MDK + + + Y
Sbjct: 550 TKAFNEMQKLRLLQLNFVDVNGDFKHISEEIRWVCWHGFPLKFLPKEFHMDKLVAMDLRY 609

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           S+I   WK  K L  LK + L HS  L   P+F+  PNLE L L+ C  L E+HP++   
Sbjct: 610 SQIRFFWKESKFLKNLKFLNLGHSHYLTHTPNFSKLPNLEILSLKDCKNLIELHPTIGEL 669

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
             LI LN+KDC S                 L SLP + S LK L TL +S          
Sbjct: 670 KALISLNLKDCKS-----------------LNSLPNSFSNLKSLQTLIISD--------- 703

Query: 539 IVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKL 598
            +  +  L EL L       LP +I  L  L  L L NC  L+ +P    +L    SL  
Sbjct: 704 -IGSLSSLRELDLSENLFHSLPSTISGLLKLETLLLDNCPELQFIPNLPPHLS---SLYA 759

Query: 599 SGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSI 658
           S C+ L++         DLS                  + K+  L++S+C  L+ +P   
Sbjct: 760 SNCTSLER-------TSDLSN-----------------VKKMGSLSMSNCPKLMEIPGLD 795

Query: 659 IALKSLKTLNLSGCFKLEN-VPETLGQ---IESLEELDISGTAVPHSTSWYSYIPINLMR 714
             L S++ +++ GC  + N   +T+ Q   +     + + G  VP    W++Y      +
Sbjct: 796 KLLDSIRVIHMEGCSNMSNSFKDTILQGWTVSGFGGVCLPGKEVP---DWFAY------K 846

Query: 715 KSVALKLPSLS 725
             V+  LPSLS
Sbjct: 847 DEVSTDLPSLS 857



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 149/353 (42%), Gaps = 75/353 (21%)

Query: 602 SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
           S+++ F +  + +K+L  L L  +       +   L  LE+L+L DCKNL+ L  +I  L
Sbjct: 610 SQIRFFWKESKFLKNLKFLNLGHSHYLTHTPNFSKLPNLEILSLKDCKNLIELHPTIGEL 669

Query: 662 KSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKL 721
           K+L +LNL  C  L ++P +   ++SL+ L IS                           
Sbjct: 670 KALISLNLKDCKSLNSLPNSFSNLKSLQTLIIS--------------------------- 702

Query: 722 PSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNI 781
                                     DIG+L SL+EL LS+N F SLP++I+ L KL  +
Sbjct: 703 --------------------------DIGSLSSLRELDLSENLFHSLPSTISGLLKLETL 736

Query: 782 ELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDS-TMIACLDSLKLLGNKS 840
            L++C  LQ +P LPP++  +  + C SL    D   + K  S +M  C   +++ G   
Sbjct: 737 LLDNCPELQFIPNLPPHLSSLYASNCTSLERTSDLSNVKKMGSLSMSNCPKLMEIPGLDK 796

Query: 841 LAFSMLREYLEAVSNTRQHLS--------------VVVPGSEIPEWFMYQNEGSS----- 881
           L  S+   ++E  SN                    V +PG E+P+WF Y++E S+     
Sbjct: 797 LLDSIRVIHMEGCSNMSNSFKDTILQGWTVSGFGGVCLPGKEVPDWFAYKDEVSTDLPSL 856

Query: 882 --ITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHG 932
             I  T+ S   NK       +    H+ +    N  F   P  ++   +  G
Sbjct: 857 SVINYTKSSITTNKPLTNDVIMSTQDHLWQGHLSNKAFKMEPGDEVEIIVDFG 909


>gi|357468659|ref|XP_003604614.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
 gi|355505669|gb|AES86811.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
          Length = 1160

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/568 (41%), Positives = 357/568 (62%), Gaps = 26/568 (4%)

Query: 1   MDSRCEKLRFLMDSG-SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +DSR + +  L+++  S+D  ++G+ GMGG+GKTTIA+ +Y+ I   FE   FL+N+RE+
Sbjct: 228 VDSRVQDMIQLLETQQSNDALLLGMWGMGGIGKTTIAKSIYNKIGRNFEGRSFLENIREV 287

Query: 60  SSKG-GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
             +  G + LQ +L++ +LK     I ++  G  +L  RL  K+VL+V+DDV  + QL +
Sbjct: 288 WEQASGQLYLQERLMNDILKDTTTKIQSIESGKSILKERLCHKRVLIVLDDVNKLDQLNA 347

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G+ +WF  GSRIIIT+RD+H+L+   VD++Y    ++  E+L+LF+  AFK  +P ++
Sbjct: 348 LCGSCKWFAPGSRIIITTRDKHILRGKQVDKIYIMKEMDESESLELFSWHAFKQTRPRED 407

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             ++S  +++Y+ GLPLALEVLGS+L  R + EWRS L++L+  P  ++   L+IS+DGL
Sbjct: 408 FSEISKNVVKYSAGLPLALEVLGSYLFDREILEWRSVLDKLKRIPNDQVHKKLKISYDGL 467

Query: 239 Q-ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHD 296
             + +K+IFLDI+CFF G DR+ V   L+GCGF   IGI VL+E+ L+TV + N L MHD
Sbjct: 468 NDDTQKEIFLDISCFFIGMDRNDVIRILDGCGFFAGIGISVLVERSLVTVDDKNKLGMHD 527

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL+++G++I++ +SP+E  + SRLW  E+V  VL E TGT+ VEG+ L       + +  
Sbjct: 528 LLRDMGREIIREKSPKEPEEHSRLWFHEDVIDVLLEHTGTKAVEGLSLKLPGRSAQRF-- 585

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            S K F  M  LRLL++  +QL    ++LS +LR L W G+PL  +PSN      + I +
Sbjct: 586 -STKTFENMKKLRLLQLSGVQLDGDFKHLSRKLRWLQWNGFPLTCIPSNFYQRNLVSIVL 644

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             S I  +WK ++ +++LK++ LSHS+ L + PDF+  PNLEKL+L+ C RL EI  S+ 
Sbjct: 645 ENSNIRLVWKEMQGMEQLKILNLSHSQYLTQTPDFSYLPNLEKLVLKDCPRLSEISQSIG 704

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI-SGLKCLSTLDVSGDLKFRE 535
              K++++N+KDC SL  LP  I         LKSL T I SG   + TL+         
Sbjct: 705 HLKKILLINLKDCISLCNLPRNI-------YTLKSLKTLILSGCSMIDTLE--------- 748

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSI 563
             E +E ME L+ L    T I  +P SI
Sbjct: 749 --EDLEQMESLTTLIANNTGITKVPFSI 774



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 124/263 (47%), Gaps = 28/263 (10%)

Query: 459 KLILEGCTRLYEIHPSLLLHNKLI--ILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
           ++I E   +  E H  L  H  +I  +L      ++  L  K+  +S ++ + K    T 
Sbjct: 535 EIIREKSPKEPEEHSRLWFHEDVIDVLLEHTGTKAVEGLSLKLPGRSAQRFSTK----TF 590

Query: 517 SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPL----SIELLSGLVLL 572
             +K L  L +SG        ++    +HLS   L      G PL    S      LV +
Sbjct: 591 ENMKKLRLLQLSG-------VQLDGDFKHLSR-KLRWLQWNGFPLTCIPSNFYQRNLVSI 642

Query: 573 NLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVP 631
            L+N  ++ ++   +  ++ L+ L LS    L + P+    + +L +L L D   + E+ 
Sbjct: 643 VLENS-NIRLVWKEMQGMEQLKILNLSHSQYLTQTPDF-SYLPNLEKLVLKDCPRLSEIS 700

Query: 632 SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
            SI  L K+ L+NL DC +L  LP +I  LKSLKTL LSGC  ++ + E L Q+ESL  L
Sbjct: 701 QSIGHLKKILLINLKDCISLCNLPRNIYTLKSLKTLILSGCSMIDTLEEDLEQMESLTTL 760

Query: 692 DISGTAVPHSTSWYSYIPINLMR 714
             + T +       + +P +++R
Sbjct: 761 IANNTGI-------TKVPFSIVR 776



 Score = 41.6 bits (96), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 6/172 (3%)

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK 720
           +K L+ L LSG     +      ++  L+      T +P +    + + I L   ++ L 
Sbjct: 593 MKKLRLLQLSGVQLDGDFKHLSRKLRWLQWNGFPLTCIPSNFYQRNLVSIVLENSNIRLV 652

Query: 721 LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS-LPTSITHLSKLL 779
              + G+  L+ LNL+    +      D   L +L++L L     +S +  SI HL K+L
Sbjct: 653 WKEMQGMEQLKILNLSHSQYLTQT--PDFSYLPNLEKLVLKDCPRLSEISQSIGHLKKIL 710

Query: 780 NIELEDCKRLQSLPQLPPNIRQVR---VNGCASLVTLLDALKLCKSDSTMIA 828
            I L+DC  L +LP+    ++ ++   ++GC+ + TL + L+  +S +T+IA
Sbjct: 711 LINLKDCISLCNLPRNIYTLKSLKTLILSGCSMIDTLEEDLEQMESLTTLIA 762


>gi|449452168|ref|XP_004143832.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1217

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 314/885 (35%), Positives = 462/885 (52%), Gaps = 123/885 (13%)

Query: 7    KLRFLMDSGSSDV----RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-ISS 61
            +LR + +  S DV     M+GI GMGG+GKTT+A+ +Y+ I+++FEA  FL NVRE +  
Sbjct: 204  QLRAVEELASHDVPDGVNMVGIHGMGGIGKTTLAKALYNKIAYQFEACCFLSNVRETLEQ 263

Query: 62   KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAG 121
               LV LQ +LLS++LK     + NV  G +++  RL  KKVL+++DDV   +QL +L G
Sbjct: 264  FKDLVQLQEKLLSEILKDNAWKVGNVHKGKNIIRDRLCSKKVLIILDDVDKDEQLDALVG 323

Query: 122  NREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQ 181
             R+WFG GS+II T+RD HLL+ H  D VY    L+  ++L+LF++ AFK   P    V 
Sbjct: 324  ERDWFGRGSKIIATTRDRHLLENHSFDIVYPIQLLDPKKSLELFSLHAFKQNHPSSNYVD 383

Query: 182  LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLE--IEPPSEILDILQISFDGLQ 239
            LS   + Y  GLPLAL +LGS L  R    W+S L  LE  +EP  E   + QI F  L 
Sbjct: 384  LSKFAVSYCKGLPLALVILGSLLHKRERKIWKSKLHELENSLEPSVEA--VFQIGFKELH 441

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
            E  K+IFLDI+CFF G D +Y  + L+ C  +P  GI +L++  L+TV +  + MHDL+Q
Sbjct: 442  ERVKEIFLDISCFFVGEDINYSKDVLKACDLNPDYGIIILMDLSLVTVEDGKIQMHDLIQ 501

Query: 300  ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
            ++GQ IV+ +S E   KRSRLW+ E    +L E +GT+ V+ I LD  H++  + +   A
Sbjct: 502  QMGQTIVRHESFEP-AKRSRLWEAEGAIKILKEKSGTKAVKAIKLD-LHYKPWLKI-VEA 558

Query: 360  KAFSKMTNLRLLKICNLQL--PNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
            +AF  M NLRLL +  +     N  EYL N L+ + W  +        +    +I   + 
Sbjct: 559  EAFRNMKNLRLLILQRVAYFPKNIFEYLPNSLKWIEWSTF-------YVNQSSSISFSVK 611

Query: 418  YSRIGELWKGI---------KHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
               +G + KG+         ++   +K + LS+   L   P+F+   NLEKL L GCT L
Sbjct: 612  GRLVGLVMKGVVNKQPRIAFENCKTMKHVDLSYCGTLKETPNFSATLNLEKLYLRGCTSL 671

Query: 469  YEIHPSLLLHNKLIILNMKDCTSLITLPGKILM-KSLEKLNL------KSLP--TTISGL 519
              IH S+   +KL+ L+++ C +L   P   LM KSLE LNL      + +P  +  S L
Sbjct: 672  KVIHESVASLSKLVTLDLEGCDNLEKFPSSYLMLKSLEVLNLSRCRKIEEIPDLSASSNL 731

Query: 520  KCL-----STLDVSGDLKFREFPEIV-------EHMEHLSELHLEGTAIRGLPL------ 561
            K L       L +  D   R   +++       +++E L   HL+  +++ L L      
Sbjct: 732  KELYLRECDRLRIIHDSIGRSLDKLIILDLEGCKNLERLPTSHLKFKSLKVLNLRNCLNL 791

Query: 562  ----------------------------SIELLSGLVLLNLKNCRSLEILPVTVSNLKCL 593
                                        SI  L  L+ L L  C +LE LP ++  LK L
Sbjct: 792  EEIIDFSMASNLEILDLNTCFSLRIIHESIGSLDKLITLQLDLCHNLEKLPSSL-KLKSL 850

Query: 594  RSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVR 653
             SL  + C KL++ PE   +MK L  + L+GT+I+ +PSSI  L  LE LNL+DC NL  
Sbjct: 851  DSLSFTNCYKLEQLPEFDENMKSLRVMNLNGTAIRVLPSSIGYLIGLENLNLNDCANLTA 910

Query: 654  LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLM 713
            LP+ I  LKSL+ L+L GC KL+  P                   P S+       +N  
Sbjct: 911  LPNEIHWLKSLEELHLRGCSKLDMFP-------------------PRSS-------LNFS 944

Query: 714  RKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLC-SLKELYLSKNSFVSLPTSI 772
            ++S   KL  L         +L +CN+        + N+C SL++L LS N+F  LP S+
Sbjct: 945  QESSYFKLTVL---------DLKNCNISNSDFLETLSNVCTSLEKLNLSGNTFSCLP-SL 994

Query: 773  THLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDAL 817
             +   L  +EL +CK LQ++ +LP ++ +V  +G   L    D +
Sbjct: 995  QNFKSLRFLELRNCKFLQNIIKLPHHLARVNASGSELLAIRPDCI 1039


>gi|451798982|gb|AGF69189.1| TMV resistance protein N-like protein 3 [Vitis labrusca]
          Length = 1524

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 273/671 (40%), Positives = 391/671 (58%), Gaps = 57/671 (8%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EKL+ LM++  + V +IGI G+GG+GKTTIA+ +Y+ ISH+++ S FL N++E  SKG +
Sbjct: 199 EKLKSLMNTELNMVSVIGIYGIGGVGKTTIAKAIYNEISHQYDGSSFLINIKE-RSKGDI 257

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
           + LQ++LL  +L+     I NV +G  M+   L+  +VL++ DDV ++KQL+ LA  ++W
Sbjct: 258 LQLQQELLHGILRGKFFKINNVNEGNSMIKRCLRSNRVLVIFDDVDELKQLEYLAEEKDW 317

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSAR 185
           F + S IIITSRD+H+L  +GVD  Y+   LN +EA++LF++ AFK  +P +    LS  
Sbjct: 318 FHAKSTIIITSRDKHVLAQYGVDIPYEVSKLNKEEAIELFSLWAFKQNRPQEVYKNLSYN 377

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           II YA GLPLAL+VLG+ L G+ +  W S L +L+I P  EI ++L+ISFDGL ++EK I
Sbjct: 378 IIDYADGLPLALKVLGASLFGKKISNWESALCKLKIIPHMEIHNVLRISFDGLDDIEKGI 437

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQI 305
           FLDIACFFKG+DRD+V+  L   G H    I  L ++CLITV  N L MHDL+Q++G +I
Sbjct: 438 FLDIACFFKGDDRDFVSRIL---GPHAEHAITTLDDRCLITVSKNMLDMHDLIQQMGWEI 494

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKM 365
           ++++ PE+ G+RSRLW +     VL  + GT  +EG+ LD         L  + ++F +M
Sbjct: 495 IRQECPEDPGRRSRLW-DSNANDVLIRNKGTRAIEGLFLDRCKFNP---LQITTESFKEM 550

Query: 366 TNLRLLKICNLQ---------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
             LRLL I N +         LP   E+ S  L  L W GYPL+ LP N      +++ +
Sbjct: 551 NRLRLLNIHNPREDQLFLKDHLPRDFEFSSYELTYLHWDGYPLESLPMNFHAKNLVQLVL 610

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             S I ++W+G K  DKL+V+ LS+S +LI +PDF+  PNLE LIL GCT          
Sbjct: 611 RGSNIKQVWRGNKLHDKLRVIDLSYSFHLIGIPDFSSVPNLEILILIGCT---------- 660

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
                    M  C                 +NL+ LP  I  LK L  L  +G  K   F
Sbjct: 661 ---------MHGC-----------------VNLELLPRNIYKLKHLQILSCNGCSKLERF 694

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
           PEI  +M  L  L L GTAI  LP SI  L+GL  L L+ C  L  +P+ + +L  L  L
Sbjct: 695 PEIKGNMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLQECSKLHKIPIHICHLSSLEVL 754

Query: 597 KLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL---V 652
            L  C+ ++   P  +  +  L +L L+      +P++I  L+ LE+LNLS C NL    
Sbjct: 755 DLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSSLEVLNLSHCNNLEQIT 814

Query: 653 RLPSSIIALKS 663
            LPS +  L +
Sbjct: 815 ELPSCLRLLDA 825



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 90/224 (40%), Positives = 131/224 (58%), Gaps = 31/224 (13%)

Query: 556  IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMK 615
            I G PL ++ L       L++C++L  LP ++   K L +L  SGCS+L+  PEI++ M+
Sbjct: 1104 IIGNPLELDSLC------LRDCKNLTSLPSSIFGFKSLATLSCSGCSQLESIPEILQDME 1157

Query: 616  DLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
             L +L L GT+IKE+PSSI+ L  L+ L LS+CKNLV LP SI  L SLK L +  C   
Sbjct: 1158 SLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVESCPSF 1217

Query: 676  ENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNL 735
            + +P+ LG+++SL  L +               P++    S+  +LPSLSGLCSLR+L L
Sbjct: 1218 KKLPDNLGRLQSLLHLSVG--------------PLD----SMNFQLPSLSGLCSLRQLEL 1259

Query: 736  TDCNLMEGALPSDIGNLCSL-KELYLSKNSFVS----LPTSITH 774
              CN+ E  +PS+I  L SL +E   S  +F +    +P  I+H
Sbjct: 1260 QACNIRE--IPSEICYLSSLGREFRRSVRTFFAESNGIPEWISH 1301



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 160/325 (49%), Gaps = 47/325 (14%)

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLS---------------------------- 646
           K+L +L L G++IK+V    +L  KL +++LS                            
Sbjct: 603 KNLVQLVLRGSNIKQVWRGNKLHDKLRVIDLSYSFHLIGIPDFSSVPNLEILILIGCTMH 662

Query: 647 DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTS 703
            C NL  LP +I  LK L+ L+ +GC KLE  PE  G +  L  LD+SGTA+   P S +
Sbjct: 663 GCVNLELLPRNIYKLKHLQILSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIMDLPSSIT 722

Query: 704 WYSYIPINLMRKSVAL-KLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLS 761
             + +   L+++   L K+P  +  L SL  L+L  CN+MEG +PSDI +L SL++L L 
Sbjct: 723 HLNGLQTLLLQECSKLHKIPIHICHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNLE 782

Query: 762 KNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCK 821
           +  F S+PT+I  LS L  + L  C  L+ + +LP  +R +  +G     +    L L  
Sbjct: 783 RGHFSSIPTTINQLSSLEVLNLSHCNNLEQITELPSCLRLLDAHGSNRTSSRAPFLPL-- 840

Query: 822 SDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSE-IPEWFMYQNEGS 880
              +++ C    +   + S   S         S   +   +V+PGS+ IPEW + + +  
Sbjct: 841 --HSLVNCFRWAQDWKHTSFRDS---------SYHGKGTCIVLPGSDGIPEWILNRGDNF 889

Query: 881 SITVTRPSNLYNKKKLVGYAICCVF 905
           S  +  P N +   + +G+AICCV+
Sbjct: 890 SSVIELPQNWHQNNEFLGFAICCVY 914



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 90/160 (56%), Gaps = 6/160 (3%)

Query: 508  NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
            NL SLP++I G K L+TL  SG  +    PEI++ ME L +L L GTAI+ +P SI+ L 
Sbjct: 1121 NLTSLPSSIFGFKSLATLSCSGCSQLESIPEILQDMESLRKLSLSGTAIKEIPSSIQRLR 1180

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF---LDG 624
            GL  L L NC++L  LP ++ NL  L+ L +  C   KK P+ +  ++ L  L    LD 
Sbjct: 1181 GLQYLLLSNCKNLVNLPESICNLTSLKFLIVESCPSFKKLPDNLGRLQSLLHLSVGPLDS 1240

Query: 625  TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSL 664
             +  ++P S+  L  L  L L  C N+  +PS I  L SL
Sbjct: 1241 MNF-QLP-SLSGLCSLRQLELQAC-NIREIPSEICYLSSL 1277



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 98/182 (53%), Gaps = 22/182 (12%)

Query: 569 LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIK 628
           L+   +  C +LE+LP  +  LK L+ L  +GCSKL++FPEI  +M+ L  L L GT+I 
Sbjct: 656 LIGCTMHGCVNLELLPRNIYKLKHLQILSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIM 715

Query: 629 EVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE-NVPETLGQIES 687
           ++PSSI  L  L+ L L +C  L ++P  I  L SL+ L+L  C  +E  +P  +  + S
Sbjct: 716 DLPSSITHLNGLQTLLLQECSKLHKIPIHICHLSSLEVLDLGHCNIMEGGIPSDICHLSS 775

Query: 688 LEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLME--GAL 745
           L++L++           +S IP             +++ L SL  LNL+ CN +E    L
Sbjct: 776 LQKLNL-------ERGHFSSIPT------------TINQLSSLEVLNLSHCNNLEQITEL 816

Query: 746 PS 747
           PS
Sbjct: 817 PS 818



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 146/350 (41%), Gaps = 38/350 (10%)

Query: 723  SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIE 782
            S+ G  SL  L+ + C+ +E ++P  + ++ SL++L LS  +   +P+SI  L  L  + 
Sbjct: 1128 SIFGFKSLATLSCSGCSQLE-SIPEILQDMESLRKLSLSGTAIKEIPSSIQRLRGLQYLL 1186

Query: 783  LEDCKRLQSLPQLPPNIRQVR---VNGCASLVTLLDALKLCKSDSTM-IACLDSLKL--- 835
            L +CK L +LP+   N+  ++   V  C S   L D L   +S   + +  LDS+     
Sbjct: 1187 LSNCKNLVNLPESICNLTSLKFLIVESCPSFKKLPDNLGRLQSLLHLSVGPLDSMNFQLP 1246

Query: 836  -------LGNKSLAFSMLRE------YLEAVSNT--RQHLSVVVPGSEIPEWFMYQNEGS 880
                   L    L    +RE      YL ++     R   +     + IPEW  +Q  G 
Sbjct: 1247 SLSGLCSLRQLELQACNIREIPSEICYLSSLGREFRRSVRTFFAESNGIPEWISHQKSGF 1306

Query: 881  SITVTRPSNLYNKKKLVGYAICCVFHVL----KNSRGNNCFGSYPTHQLNCHIGHGIYGI 936
             IT+  P + Y     +G+ +C ++  L    K  R  +C  ++     +          
Sbjct: 1307 KITMKLPWSWYENDDFLGFVLCSLYVPLEIETKTHRIFSCILNFGDDSDSFLFDDLRLEQ 1366

Query: 937  GFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLG-QGLEVKM 995
                 + +  S+   L+Y S+    DI     SN    E   +N SF  + G + ++   
Sbjct: 1367 ICECCYYEDASNQGLLVYYSKS---DIPEKFHSN----EWRTLNASFNVYFGIKPVKAAR 1419

Query: 996  CGLHPVYMDEVEELDQTTNQPSRFTVYNLNEFDQHFVGSKMIVATTSKRS 1045
            CG H +Y  + E+ + T  Q S  +  +L     H    +    T S+RS
Sbjct: 1420 CGFHFLYAHDYEQNNLTMVQGSSSSHVDLG---GHRSAVQDTNGTHSQRS 1466


>gi|357469529|ref|XP_003605049.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355506104|gb|AES87246.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1352

 Score =  418 bits (1074), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 267/735 (36%), Positives = 409/735 (55%), Gaps = 37/735 (5%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DSR E+++ L++  S  V M+GI G GG+GKTT A  +Y+ I   FEA+ FL NVRE S
Sbjct: 189 LDSRFEQVKSLINIDSDVVCMLGIYGAGGIGKTTFALDIYNKIRRRFEAACFLGNVREKS 248

Query: 61  SKG--GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
           ++   GL  LQR LLS++ +     + + + G   +  RL RK+VLL++DDV  VKQL+S
Sbjct: 249 NENTRGLEDLQRTLLSEMGEETQTMMGSTYRGSSEIKRRLARKRVLLILDDVDSVKQLKS 308

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVD-EVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
           LAG  +WFGSGSRII+T+RD  +L  H V  + YK   LN  E+++LF M AF   +P +
Sbjct: 309 LAGGHDWFGSGSRIIVTTRDIDVLHKHDVKIKTYKLEELNNHESIELFCMYAFNMSRPAE 368

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
              ++S + I YA G+PL L V+GS L G+S+ EW   L++    P +EI  +L+IS+ G
Sbjct: 369 NFAKISTQAISYAQGIPLVLTVIGSNLKGKSIHEWHIELQKYRKVPDAEIQSVLEISYKG 428

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHD 296
           L +L++K+FLDIACFFKG   DYV   L+ CGF+PV  IRV + KCL+ V  N  L MHD
Sbjct: 429 LSDLDQKVFLDIACFFKGERWDYVKRILDACGFYPV--IRVFVSKCLLIVDENGCLEMHD 486

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           L+Q++G++I++++S    G+RSRLW  ++   VL  + G+  VEGI+L     E   +  
Sbjct: 487 LIQDMGREIIRKESTSNPGERSRLWSHKDALDVLKGNLGSTAVEGIMLHPPKQEKVDHW- 545

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
               AF KM NLR+L + N    +G  YL N LRLL W+ YP K  P N    K ++  +
Sbjct: 546 -DDAAFKKMKNLRILIVRNTVFSSGPSYLPNSLRLLDWKCYPSKDFPPNFYPYKIVDFKL 604

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
            +S +  L K  +  + L  + LS+S+++ ++P+ +GA  L    L+ C +L     S+ 
Sbjct: 605 PHSSMI-LKKPFQIFEDLTFINLSYSQSITQIPNLSGATKLRVFTLDNCHKLVMFDKSVG 663

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
               L+ L+   CT L +   K+ + SL+          IS   C          KF  F
Sbjct: 664 FMPNLVYLSASGCTELKSFVPKMYLPSLQ---------VISFNFC---------KKFEHF 705

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
           P +++ M+   ++H+  TAI+ +P SI  L+GL L+++  C+ L+ L  +   L  L +L
Sbjct: 706 PHVIQKMDRPLKIHMINTAIKEIPKSIGNLTGLELMDMSICKGLKDLSSSFLLLPKLVTL 765

Query: 597 KLSGCSKLK----KFPEI---VRSMKDLSELFLDGTSIK--EVPSSIELLTKLELLNLSD 647
           K+ GCS+L+    +F E         ++  L   G ++   +V + IE   KLE L +  
Sbjct: 766 KIDGCSQLRTSFQRFKERNSGANGYPNIETLHFSGANLSNDDVNAIIENFPKLEDLKVFH 825

Query: 648 CKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSY 707
               V LP+ I     LK+L++S C  L  +PE    I+ ++           S+  +S 
Sbjct: 826 -NWFVSLPNCIRGSLHLKSLDVSFCKNLTEIPELPLNIQKIDARYCQSLTSKASSILWSM 884

Query: 708 IPINLMRKSVALKLP 722
           +   + R  V + +P
Sbjct: 885 VSQEIQRLQVVMPMP 899



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 149/353 (42%), Gaps = 77/353 (21%)

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
           S+  +  LV L+   C  L+   V    L  L+ +  + C K + FP +++ M    ++ 
Sbjct: 661 SVGFMPNLVYLSASGCTELKSF-VPKMYLPSLQVISFNFCKKFEHFPHVIQKMDRPLKIH 719

Query: 622 LDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPET 681
           +  T+IKE+P SI  LT LEL+++S CK L  L SS + L  L TL + GC +L    + 
Sbjct: 720 MINTAIKEIPKSIGNLTGLELMDMSICKGLKDLSSSFLLLPKLVTLKIDGCSQLRTSFQR 779

Query: 682 LGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLM 741
             +                             R S A      +G  ++  L+ +  NL 
Sbjct: 780 FKE-----------------------------RNSGA------NGYPNIETLHFSGANLS 804

Query: 742 EGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQ 801
              + + I N   L++L +  N FVSLP  I     L ++++  CK L  +P+LP NI++
Sbjct: 805 NDDVNAIIENFPKLEDLKVFHNWFVSLPNCIRGSLHLKSLDVSFCKNLTEIPELPLNIQK 864

Query: 802 VRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLS 861
           +    C SL +                           S+ +SM       VS   Q L 
Sbjct: 865 IDARYCQSLTS------------------------KASSILWSM-------VSQEIQRLQ 893

Query: 862 VV--VPGSEIPEWF-MYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS 911
           VV  +P  EIPEWF   + +G  +       L+ ++K    A+  VF  +K +
Sbjct: 894 VVMPMPKREIPEWFDCVRTQGIPL-------LWARQKFPVAALALVFQEVKKT 939


>gi|356557333|ref|XP_003546971.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1158

 Score =  418 bits (1074), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 287/735 (39%), Positives = 415/735 (56%), Gaps = 67/735 (9%)

Query: 1   MDSRCEKLRFLMDSGSS--DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE 58
           ++ R   L  L+  GS+   VR+IGI GMGG+GKTTIA  VY+ +  E+E   F+ N+ E
Sbjct: 191 IEERIADLESLLCLGSTIVGVRVIGIWGMGGIGKTTIAAAVYNRLYFEYEGCCFMANITE 250

Query: 59  ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            S K G++ ++ +++S LLK  D  I         +  RL RKKVL+V+DD+ D +QL++
Sbjct: 251 ESEKHGMIYVKNKIISILLKENDLQIGTPNGVPPYVKRRLIRKKVLVVLDDINDSEQLEN 310

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G  +WFGSGSRII+T+RD+ +L     D VY+   LN DEA++LF + AFK      E
Sbjct: 311 LVGALDWFGSGSRIIVTTRDKGVLGKKA-DIVYEAKALNSDEAIKLFMLNAFKQSCLEME 369

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
            ++LS R+I+YA G PLAL+VLGSFL G+S  EW S L++L+  P  +I ++L++++D L
Sbjct: 370 WIELSRRVIQYANGNPLALKVLGSFLYGKSQIEWESQLQKLKKMPQVKIQNVLRLTYDRL 429

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT----LWM 294
              EK IFL IACFFKG +   +   L+ CGF  +IG+RVL +K LI     +    + M
Sbjct: 430 DREEKNIFLYIACFFKGYEVRRIIYLLDACGFSTIIGLRVLKDKALIIEAKGSGISIVSM 489

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           HDL+QE+G +IV+ +  E+ GKR+RLW   ++  VL  +TGT+ ++ I   N    +EV 
Sbjct: 490 HDLIQEMGWEIVREECIEDPGKRTRLWDPNDIHLVLKNNTGTKAIKSITF-NVSKFDEV- 547

Query: 355 LCASAKAFSKMTNLRLLKICN-------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
            C S + F +M  L+ L           L LP GLE L N LRL  W  YPLK LP +  
Sbjct: 548 -CLSPQIFERMQQLKFLNFTQHYGDEQILYLPKGLESLPNDLRLFHWVSYPLKSLPLSFC 606

Query: 408 MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
            +  +E+ + +SR+ +LW GI++L+ LK + LS+S+NL+ +PDF+ A NLE++ L  C  
Sbjct: 607 AENLVELKLPWSRVEKLWDGIQNLEHLKKIDLSYSKNLLELPDFSKASNLEEVELYSCKN 666

Query: 468 LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDV 527
           L  +HPS+L   KL+ LN+  C +L +L                     S L+ L  L +
Sbjct: 667 LRNVHPSILSLKKLVRLNLFYCKALTSLRSD------------------SHLRSLRDLFL 708

Query: 528 SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
            G  + +EF    E+M+   +L L  TAI  LP SI  L  L  L L +C+SL  LP  V
Sbjct: 709 GGCSRLKEFSVTSENMK---DLILTSTAINELPSSIGSLRKLETLTLDHCKSLSNLPNKV 765

Query: 588 SNLKCLRSLKLSGCSKL--KKFPEIVRSMKDLSELFLD---------------------- 623
           +NL+ LR L + GC++L       +V  +K L  L L+                      
Sbjct: 766 ANLRSLRRLHIYGCTQLDASNLHILVNGLKSLETLKLEECRNLFEIPDNINLLSSLRELL 825

Query: 624 --GTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPET 681
             GT I+ V +SI+ L+KLE L+LSDC+ L  LP    ++K L  +N   C  LE V  T
Sbjct: 826 LKGTDIESVSASIKHLSKLEKLDLSDCRRLYSLPELPQSIKELYAIN---CSSLETVMFT 882

Query: 682 LGQIESLEELDISGT 696
           L  +E L    +  T
Sbjct: 883 LSAVEMLHAYKLHTT 897



 Score =  147 bits (372), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 161/533 (30%), Positives = 245/533 (45%), Gaps = 98/533 (18%)

Query: 516  ISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTA-IRGLPLSIELLSGLVLLNL 574
            I  L+ L  +D+S      E P+      +L E+ L     +R +  SI  L  LV LNL
Sbjct: 627  IQNLEHLKKIDLSYSKNLLELPDF-SKASNLEEVELYSCKNLRNVHPSILSLKKLVRLNL 685

Query: 575  KNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSI 634
              C++L  L  + S+L+ LR L L GCS+LK+F     +MKDL    L  T+I E+PSSI
Sbjct: 686  FYCKALTSLR-SDSHLRSLRDLFLGGCSRLKEFSVTSENMKDL---ILTSTAINELPSSI 741

Query: 635  ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
              L KLE L L  CK+L  LP+ +  L+SL+ L++ GC                 +LD S
Sbjct: 742  GSLRKLETLTLDHCKSLSNLPNKVANLRSLRRLHIYGC----------------TQLDAS 785

Query: 695  GTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDC-NLMEGALPSDIGNLC 753
                        +I +N              GL SL  L L +C NL E  +P +I  L 
Sbjct: 786  NL----------HILVN--------------GLKSLETLKLEECRNLFE--IPDNINLLS 819

Query: 754  SLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL--- 810
            SL+EL L      S+  SI HLSKL  ++L DC+RL SLP+LP +I+++    C+SL   
Sbjct: 820  SLRELLLKGTDIESVSASIKHLSKLEKLDLSDCRRLYSLPELPQSIKELYAINCSSLETV 879

Query: 811  ------VTLLDALKL-------CKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTR 857
                  V +L A KL        K D   ++ +     +  K +A+    ++    +N+ 
Sbjct: 880  MFTLSAVEMLHAYKLHTTFQNCVKLDQHSLSAIGVNAYVNIKKVAYD---QFSTIGTNSI 936

Query: 858  QHL----SVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVL----K 909
            + L      + PGSE+PEWF+Y+   +S+TV   S++    K++G+  C +        K
Sbjct: 937  KFLGGPVDFIYPGSEVPEWFVYRTTQASVTVDLSSSV-PCSKIMGFIFCVIVDQFTSNDK 995

Query: 910  NSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFG-----QAGSDHLWLLYLSRQTCYDIR 964
            N  G +C+       +   +G  +   G  D +      +  SDH+ L Y  +    +  
Sbjct: 996  NYIGCDCY-------METGVGERVTR-GHMDNWSSIHACEFFSDHVCLWYDEKCCLKNQE 1047

Query: 965  LPLESNLEPFESNHVNVSFEPWLGQG--------LEVKMCGLHPVYMDEVEEL 1009
               ES  E   S +  +SFE +   G        + +K CG+ P+Y  E +  
Sbjct: 1048 CESESMEELMASYNPKISFEFFAKTGSIWEKRSDIIIKGCGVCPIYDTECDNF 1100


>gi|357474623|ref|XP_003607596.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508651|gb|AES89793.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1039

 Score =  417 bits (1073), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 260/617 (42%), Positives = 358/617 (58%), Gaps = 42/617 (6%)

Query: 1   MDSRCEKL-RFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           M+   EK+   L+     DVR++GICGMGG+GKTT+A  +Y  ISH+F+A  F+D++ +I
Sbjct: 200 MNPHIEKVVNLLLLDSVDDVRVVGICGMGGIGKTTLATALYGQISHQFDARCFIDDLSKI 259

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
               G V  Q+Q+L Q L      I N+FD  D +  RL+R + L+++D+V  V+QL  L
Sbjct: 260 YRHDGQVGAQKQILHQTLGKEHFQICNLFDTDDSIRRRLRRLRALIILDNVDKVEQLDKL 319

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           A NRE  G GSRIII SRDEH+L  +GVDEVYK   LN   +LQLF  KAFK    +   
Sbjct: 320 ALNRECLGVGSRIIIISRDEHILNEYGVDEVYKVPLLNETNSLQLFCQKAFKLDHIMSGY 379

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            +L+   + YA GLPLA++VLGSFL GR + EWRS L RL+  P  +I+D+L++SFDGL+
Sbjct: 380 DKLALDTLSYANGLPLAIKVLGSFLFGRDISEWRSALARLKESPNKDIMDVLRLSFDGLE 439

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
            LEK+IFLDIACFF+  D++ +TN L  CGFHP IG+R+LI+K LI+ ++    MH LL 
Sbjct: 440 NLEKEIFLDIACFFERYDKECLTNILNCCGFHPDIGLRILIDKSLISFYHGGCVMHSLLV 499

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           ELG++IVQ  S ++L K SRLW  E   +V+ E+     V+ IVL  YH   ++   A A
Sbjct: 500 ELGRKIVQENSTKDLKKWSRLWFPEHFDNVMLENMEKN-VQAIVL-AYHSPRQIKKFA-A 556

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           +  S M ++RLL + N      L YLSN LR + W  YP  +LP + Q ++ +E+++ YS
Sbjct: 557 ETLSNMNHIRLLILENTYFSGSLNYLSNELRYVEWNRYPFTYLPKSFQPNQLVELHLSYS 616

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
            I +LWKG K+L  L++M L HS NLI++PDF   PNLE L L GC  L  I  S+ +  
Sbjct: 617 SIKQLWKGKKYLPNLRIMDLMHSRNLIKLPDFGEVPNLEMLNLAGCVNLISIPNSIFVLT 676

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLN-----------LKSLPTTISGLKCLSTLDVS 528
            L  LN+  C+ +   P     K L+KL+             SL  T  GL  L      
Sbjct: 677 SLKYLNLSGCSKVFNYP-----KHLKKLDSSETVLHSQSKTSSLILTTIGLHSLYQNAHK 731

Query: 529 G------------------DLKF---REFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
           G                  D+ F    + P+ +  +  L  L L G     LP S+  LS
Sbjct: 732 GLVSRLLSSLPSFFFLRELDISFCGLSQIPDAIGCIRWLGRLVLSGNNFVTLP-SLRELS 790

Query: 568 GLVLLNLKNCRSLEILP 584
            LV L+L+ C+ L  LP
Sbjct: 791 KLVYLDLQYCKQLNFLP 807



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 151/505 (29%), Positives = 229/505 (45%), Gaps = 71/505 (14%)

Query: 538  EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
            E + +M H+  L LE T   G   S+  LS  +     N      LP +    + L  L 
Sbjct: 557  ETLSNMNHIRLLILENTYFSG---SLNYLSNELRYVEWNRYPFTYLPKSFQPNQ-LVELH 612

Query: 598  LSGCS-----KLKKFPEIVRSMKDL-SELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
            LS  S     K KK+   +R M  + S   +      EVP+       LE+LNL+ C NL
Sbjct: 613  LSYSSIKQLWKGKKYLPNLRIMDLMHSRNLIKLPDFGEVPN-------LEMLNLAGCVNL 665

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPI- 710
            + +P+SI  L SLK LNLSGC K+ N P+ L +++S E        V HS S  S + + 
Sbjct: 666  ISIPNSIFVLTSLKYLNLSGCSKVFNYPKHLKKLDSSE-------TVLHSQSKTSSLILT 718

Query: 711  ---------NLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLS 761
                     N  +  V+  L SL     LR+L+++ C L +  +P  IG +  L  L LS
Sbjct: 719  TIGLHSLYQNAHKGLVSRLLSSLPSFFFLRELDISFCGLSQ--IPDAIGCIRWLGRLVLS 776

Query: 762  KNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP-PNIRQVRVNGCASLVTLLDALKLC 820
             N+FV+LP S+  LSKL+ ++L+ CK+L  LP+LP P+   V  N C   + + +  +L 
Sbjct: 777  GNNFVTLP-SLRELSKLVYLDLQYCKQLNFLPELPLPHSSTVGQN-CVVGLYIFNCPELG 834

Query: 821  KSDSTMIACLDSL-KLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEG 879
            +        L  L + L     +F+   E           + +V+PGSEIP W   Q+ G
Sbjct: 835  ERGHCSRMTLSWLIQFLHANQESFACFLE---------TDIGIVIPGSEIPRWLNNQSLG 885

Query: 880  SSITVTRPSNLYNKKKLVGYAICCVF-------HVLKNSRGNN-CFGSYPTHQLNCHIGH 931
            +S+++   S++ + K  +G   C VF       ++  N   NN C      H      G+
Sbjct: 886  NSMSINL-SSIVHDKDFIGLVACVVFSVKLDYPNITTNELENNICISLDEDH---TRTGY 941

Query: 932  GIYG----IGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWL 987
            G       I + D F    SDH WLLYL     +D RL  +     F+   +    +   
Sbjct: 942  GFNFSCPVICYADLF-TPESDHTWLLYLP----WD-RLNPDKTFRGFDHITMTTFIDERE 995

Query: 988  GQGLEVKMCGLHPVYMDEVEELDQT 1012
            G   EVK CG   ++  + ++ + T
Sbjct: 996  GLHGEVKKCGYRCIFKQDQQQFNST 1020


>gi|356560705|ref|XP_003548629.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1059

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 237/578 (41%), Positives = 364/578 (62%), Gaps = 25/578 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           ++SR +K+  L+++  + V MIGI GMGGLGKT+ A+ +Y+ I  +F    F++++REI 
Sbjct: 210 LESRVQKVIGLINNQFTKVCMIGIWGMGGLGKTSTAKGIYNQIHRKFIDKSFIEDIREIC 269

Query: 60  -SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            +   G + LQ++LLS +LK  +  I +V  G   +  RL  K++L+V+DDV ++ Q++ 
Sbjct: 270 QTEGRGHILLQKKLLSDVLK-TEVDILSVGMGKTTIKERLSGKRMLVVLDDVNELGQVEH 328

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L GNREWFG G+ IIIT+RD  LLK   VD +YK   ++ +E+L+LF+  AF   +P ++
Sbjct: 329 LCGNREWFGQGTVIIITTRDVRLLKQLKVDSIYKLEEMDKNESLELFSWHAFGNAEPRED 388

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             +L+  ++ Y GGLPLAL VLG++L  R    W S L +LE  P  ++   L+ISFDGL
Sbjct: 389 FKELARSVVAYCGGLPLALRVLGAYLIERPKQLWESVLSKLEKIPNDQVQKKLRISFDGL 448

Query: 239 QE-LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHD 296
            + LEK IFLD+ CFF G DR YVT  L GCG H  IGI VL+E+ LI V  NN L MH 
Sbjct: 449 SDPLEKDIFLDVCCFFIGKDRGYVTEILNGCGLHADIGITVLLERSLIKVEKNNKLGMHP 508

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL+++G++I+   S  + GKRSRLW +++V  VLT++TGTE + G+ L  ++   +   C
Sbjct: 509 LLRDMGREIICESSRNKPGKRSRLWFQKDVLDVLTKNTGTETIVGLALKLHYSSRD---C 565

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            +A AF +M +LRLL++ ++ +    +YLS +LR + W+G+P K++P+N  ++  I I +
Sbjct: 566 FNAYAFKEMKSLRLLQLDHVHITGDYQYLSKQLRWVCWQGFPSKYIPNNFNLEGVIAIDL 625

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
            +S +  +WK  + L  LK++ LSHS+ L   P+F+G P+LEKLIL+ C  L ++H S+ 
Sbjct: 626 KHSNLRLVWKKPQVLQWLKILNLSHSKYLTATPNFSGLPSLEKLILKDCPSLSKVHKSIG 685

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
             +KL+++NMKDCTS                 L +LP  +  LK + TL++SG  K  + 
Sbjct: 686 DLHKLVLINMKDCTS-----------------LSNLPREMYQLKSVKTLNLSGCSKIDKL 728

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL 574
            E +  ME L+ L  E TA++ +P SI  L  +  ++L
Sbjct: 729 EEDIVQMESLTTLIAENTAVKQVPFSIVSLKSIGYISL 766



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 159/374 (42%), Gaps = 50/374 (13%)

Query: 566 LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DG 624
           L G++ ++LK+  +L ++      L+ L+ L LS    L   P     +  L +L L D 
Sbjct: 617 LEGVIAIDLKHS-NLRLVWKKPQVLQWLKILNLSHSKYLTATPNF-SGLPSLEKLILKDC 674

Query: 625 TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQ 684
            S+ +V  SI  L KL L+N+ DC +L  LP  +  LKS+KTLNLSGC K++ + E + Q
Sbjct: 675 PSLSKVHKSIGDLHKLVLINMKDCTSLSNLPREMYQLKSVKTLNLSGCSKIDKLEEDIVQ 734

Query: 685 IESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGA 744
           +ESL  L    TAV         +P ++    V+LK      LC    L+          
Sbjct: 735 MESLTTLIAENTAVKQ-------VPFSI----VSLKSIGYISLCGYEGLS-------RNV 776

Query: 745 LPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP--PNIRQV 802
            PS I +  S      + N    + +     S L++I++++      +P L    N+R V
Sbjct: 777 FPSIIWSWMS-----PTMNPLSCIHSFSGTSSSLVSIDMQNNDLGDLVPVLTNLSNLRSV 831

Query: 803 RVNGCAS-------LVTLLD---ALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEA 852
            V  C +       L T+LD    +   + + T      S   L +  +     +EY   
Sbjct: 832 LVQ-CDTEAELSKQLGTILDDAYGVNFTELEITSDTSQISKHYLKSYLIGIGSYQEYFNT 890

Query: 853 VSN-------TRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
           +S+       T +   V +PG   P W  +   G S+  T P N + K    G A+C V+
Sbjct: 891 LSDSISERLETSESCDVSLPGDNDPYWLAHIGMGHSVYFTVPENCHMK----GMALCVVY 946

Query: 906 HVLKNSRGNNCFGS 919
                     C  S
Sbjct: 947 LSTPEKTATECLIS 960


>gi|342365826|gb|AEL30360.1| TIR-NBS-LRR-TIR type disease resistance protein [Arachis hypogaea]
          Length = 849

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 288/700 (41%), Positives = 415/700 (59%), Gaps = 31/700 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++SR E++  L+  G +DVR IGI GMGG+GKTTIAR V++ I   FE + FL +VRE  
Sbjct: 7   INSRVEQVITLIGLGLNDVRFIGIWGMGGIGKTTIARAVFETIRCSFEVTCFLADVRENC 66

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            K  +  +Q+QLL Q+  ++ N+++N +DG  ++ + L+ KKVLLV+DDV   KQL+ LA
Sbjct: 67  EKKDITHMQKQLLDQM-NISSNAVYNKYDGRTIIQNSLRLKKVLLVLDDVNHEKQLEDLA 125

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G + WFG GSRIIIT+RD HLL+ + + E Y   GL  +EAL LF+++AF   +P +E +
Sbjct: 126 GEKAWFGPGSRIIITTRDFHLLRKNKLHETYNVEGLVENEALNLFSLEAFNLPKPSEEFL 185

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            LS  +++Y+GGLPLAL+VLGS+L+GR ++ W S +E+++    SEI+D+L+IS+DGL +
Sbjct: 186 ALSKEVVKYSGGLPLALKVLGSYLNGRGIEVWHSAIEKIKHFSHSEIIDVLKISYDGLDD 245

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV----HNNTLWMHD 296
           +EK IFLDIACFFKG  + +VT  L+ CG    IGI +LI + LIT+    ++  L MHD
Sbjct: 246 MEKDIFLDIACFFKGWQKHHVTEILKRCGHDAEIGIDILINRSLITIDKYDYDYWLGMHD 305

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL+E+G++IV ++S   + KRSRLW  E+V  VLT+   T+   GIVL  ++ E EV   
Sbjct: 306 LLEEMGKRIVIQESQNVVCKRSRLWCLEDVEFVLTQKKKTKATHGIVLHEWYSETEVN-- 363

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLP-SNLQMDKTIEIY 415
               +FSK+  L+LL +   + P  L  +   L++  WR  P+K LP ++ Q  + +EI 
Sbjct: 364 QRDLSFSKLCQLKLLILDGAKAPI-LCDIPCTLKVFCWRRCPMKTLPLTDHQRYELVEIN 422

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           +  S+I ELW G K L+ L+ + LS  + L + PD +GAPNL+KL L GC  L  IHPSL
Sbjct: 423 LSKSQIAELWDGKKVLENLEHLYLSWCKQLKQTPDLSGAPNLKKLNLRGCEELDYIHPSL 482

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
             H +L+ LN++DC  L TL  K+ M SLEKL+L S  +                   R 
Sbjct: 483 AHHKRLVELNLEDCKRLETLGDKLEMSSLEKLDLDSCSS------------------LRR 524

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
            PE  E M+ LS L+L  T I  LP ++  L+G+  LNL  C  +  L +++     L+ 
Sbjct: 525 LPEFGECMKKLSILNLRNTGIEELPPTLGNLAGVSELNLSGCDKITGLLLSLGCFVGLKK 584

Query: 596 LKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           L L    +     E +    D  +          +   I  L  L  L+LS     +R+P
Sbjct: 585 LVLRALPQKTDGLESLTVRADYDDSDSSSREESTLSYDIAHLASLTYLDLSR-NRFLRVP 643

Query: 656 SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
            SI  L  L  L LS C +LE +PE      SL ELD  G
Sbjct: 644 ISIHQLPRLTHLKLSFCDELEVLPELPS---SLRELDAQG 680



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 199/429 (46%), Gaps = 49/429 (11%)

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
           KL+IL+      L  +P  + +    +  +K+LP T      L  +++S   +  E  + 
Sbjct: 376 KLLILDGAKAPILCDIPCTLKVFCWRRCPMKTLPLTDHQRYELVEINLSKS-QIAELWDG 434

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
            + +E+L  L+L           +     L  LNL+ C  L+ +  ++++ K L  L L 
Sbjct: 435 KKVLENLEHLYLSWCKQLKQTPDLSGAPNLKKLNLRGCEELDYIHPSLAHHKRLVELNLE 494

Query: 600 GCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSI 658
            C +L+   + +  M  L +L LD  +S++ +P   E + KL +LNL +   +  LP ++
Sbjct: 495 DCKRLETLGDKLE-MSSLEKLDLDSCSSLRRLPEFGECMKKLSILNLRN-TGIEELPPTL 552

Query: 659 IALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVA 718
             L  +  LNLSGC K+  +  +LG    L++L +   A+P  T            +S+ 
Sbjct: 553 GNLAGVSELNLSGCDKITGLLLSLGCFVGLKKLVLR--ALPQKTDGL---------ESLT 601

Query: 719 LKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
           ++        S R+         E  L  DI +L SL  L LS+N F+ +P SI  L +L
Sbjct: 602 VRADYDDSDSSSRE---------ESTLSYDIAHLASLTYLDLSRNRFLRVPISIHQLPRL 652

Query: 779 LNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGN 838
            +++L  C  L+ LP+LP ++R++   GC SL            D + +  + S    G 
Sbjct: 653 THLKLSFCDELEVLPELPSSLRELDAQGCYSL------------DKSYVDDVISKTCCG- 699

Query: 839 KSLAFSMLREYLEAVSNTRQH-LSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLV 897
                     + E+ S  R+  L +++ G EIP WF +Q E   ++V+ P N  +  ++V
Sbjct: 700 ----------FAESASQDREDFLQMMITGEEIPAWFEHQEEDEGVSVSFPLNCPS-TEMV 748

Query: 898 GYAICCVFH 906
             A+C +F+
Sbjct: 749 ALALCFLFN 757


>gi|449486541|ref|XP_004157327.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1248

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 312/916 (34%), Positives = 466/916 (50%), Gaps = 154/916 (16%)

Query: 7    KLRFLMDSGSSDV----RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-ISS 61
            +LR + +  S DV     M+GI GMGG+GKTT+A+ +Y+ I+++FEA  FL NVRE +  
Sbjct: 204  QLRAVEELASHDVPDGVNMVGIHGMGGIGKTTLAKALYNKIAYQFEACCFLSNVRETLEQ 263

Query: 62   KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAG 121
               LV LQ +LLS++LK     + NV  G +++  RL  KKVL+++DDV   +QL +L G
Sbjct: 264  FKDLVQLQEKLLSEILKDNAWKVGNVHKGKNIIRDRLCSKKVLIILDDVDKDEQLDALVG 323

Query: 122  NREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQ 181
             R+WFG GS+II T+RD HLL+ H  D VY    L+  ++L+LF++ AFK   P    V 
Sbjct: 324  ERDWFGRGSKIIATTRDRHLLENHSFDIVYPIQLLDPKKSLELFSLHAFKQNHPSSNYVD 383

Query: 182  LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLE--IEPPSEILDILQISFDGLQ 239
            LS   + Y  GLPLAL +LGS L  R    W+S L  LE  +EP  E   + QI F  L 
Sbjct: 384  LSKFAVSYCKGLPLALVILGSLLHKRERKIWKSKLHELENSLEPSVEA--VFQIGFKELH 441

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
            E  K+IFLDI+CFF G D +Y  + L+ C  +P  GI +L++  L+TV +  + MHDL+Q
Sbjct: 442  ERVKEIFLDISCFFVGEDINYSKDVLKACDLNPDYGIIILMDLSLVTVEDGKIQMHDLIQ 501

Query: 300  ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
            ++GQ IV+ +S E   KRSRLW+ E    +L E +GT+ V+ I LD  H++  + +   A
Sbjct: 502  QMGQTIVRHESFEP-AKRSRLWEAEGAIKILKEKSGTKAVKAIKLD-LHYKPWLKI-VEA 558

Query: 360  KAFSKMTNLRLLKICNLQL--PNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
            +AF  M NLRLL +  +     N  EYL N L+ + W  +        +    +I   + 
Sbjct: 559  EAFRNMKNLRLLILQRVAYFPKNIFEYLPNSLKWIEWSTF-------YVNQSSSISFSVK 611

Query: 418  YSRIGELWKGI---------KHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
               +G + KG+         ++   +K + LS+   L   P+F+   NLEKL L GCT L
Sbjct: 612  GRLVGLVMKGVVNKQPRIAFENCKTMKHVDLSYCGTLKETPNFSATLNLEKLYLRGCTSL 671

Query: 469  YEIHPSLLLHNKLIILNMKDCTSLITLPGKILM--------------------------- 501
              IH S+   +KL+ L+++ C +L   P   LM                           
Sbjct: 672  KVIHESVASLSKLVTLDLEGCDNLEKFPSSYLMLKSLEVLNLSRCRKIEEIPDLSASSNL 731

Query: 502  -------------------KSLEKL---------NLKSLPTTISGLKCLSTLDVSGDLK- 532
                               +SL+KL         NL+ LP   + L+ L  L+++  LK 
Sbjct: 732  KELYLRECDRLRIIHDSIGRSLDKLIILDLEGCKNLERLPIYTNKLESLELLNLASCLKL 791

Query: 533  -------FREFPEIVE-------------HMEHLSELHLEGT----------AIRGLPLS 562
                   FR+FP  ++             ++E +++  +             ++R +  S
Sbjct: 792  ETFFDSSFRKFPSHLKFKSLKVLNLRDCLNLEEITDFSMASNLEILDLNTCFSLRIIHES 851

Query: 563  IELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL 622
            I  L  L+ L L  C +LE LP ++  LK L SL  + C KL++ PE   +MK L  + L
Sbjct: 852  IGSLDKLITLQLDLCHNLEKLPSSL-KLKSLDSLSFTNCYKLEQLPEFDENMKSLRVMNL 910

Query: 623  DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
            +GT+I+ +PSSI  L  LE LNL+DC NL  LP+ I  LKSL+ L+L GC KL+  P   
Sbjct: 911  NGTAIRVLPSSIGYLIGLENLNLNDCANLTALPNEIHWLKSLEELHLRGCSKLDMFP--- 967

Query: 683  GQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLME 742
                            P S+       +N  ++S   KL  L         +L +CN+  
Sbjct: 968  ----------------PRSS-------LNFSQESSYFKLTVL---------DLKNCNISN 995

Query: 743  GALPSDIGNLC-SLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQ 801
                  + N+C SL++L LS N+F  LP S+ +   L  +EL +CK LQ++ +LP ++ +
Sbjct: 996  SDFLETLSNVCTSLEKLNLSGNTFSCLP-SLQNFKSLRFLELRNCKFLQNIIKLPHHLAR 1054

Query: 802  VRVNGCASLVTLLDAL 817
            V  +G   L    D +
Sbjct: 1055 VNASGSELLAIRPDCI 1070


>gi|356542387|ref|XP_003539648.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1069

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 241/568 (42%), Positives = 348/568 (61%), Gaps = 27/568 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           ++ R +++   + + S+ V MIGI GMGG GKTTIA+ +Y+ I   F    F++N+R++ 
Sbjct: 198 LEPRGQEVIGFIKNQSTKVCMIGIWGMGGSGKTTIAKFIYNQIHSRFPGKSFIENIRKVC 257

Query: 60  -SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            +   G   LQ QLL+ +LK     I +V  G  M+  RL  K+VL+V+DDV +  QL+ 
Sbjct: 258 ETDGRGHAHLQEQLLTDVLK-TKVKIHSVGMGTSMIEKRLSGKEVLIVLDDVNEFDQLKD 316

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L GNR+W G GS IIIT+RD  LL    VD VYK   +N +EAL+LF+  AF+  +P +E
Sbjct: 317 LCGNRKWIGLGSVIIITTRDRGLLNILNVDYVYKMEEMNENEALELFSWHAFRKAEPREE 376

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             +L+  ++ Y GGLPLALEVLGS+L  R+  EW++ L +LEI P +++   L+ISFDGL
Sbjct: 377 FNELARNVVAYCGGLPLALEVLGSYLIERTEKEWKNLLSKLEIIPNNQVQKKLRISFDGL 436

Query: 239 Q-ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHD 296
             ++EK IFLD+ CFF G D+ YVT  L GCG H  IGI VLIE+ LI V  NN L MH 
Sbjct: 437 HDQMEKDIFLDVCCFFIGKDKAYVTEILNGCGLHADIGITVLIERSLIIVEKNNKLGMHQ 496

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           L++++G++I++    +E GKRSRLW  ++V  VLT++TGTE VEG+ L  +    +   C
Sbjct: 497 LVRDMGREIIRESLTKEPGKRSRLWFHKDVIDVLTKNTGTEAVEGLALKLHLTSRD---C 553

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
             A AF +M  LRLLK+ + Q+       S +LR + W+G+PLK++P    ++  I I +
Sbjct: 554 FKADAFEEMKRLRLLKLDHAQVTGDYGNFSKQLRWINWQGFPLKYIPKTFYLEGVIAIDL 613

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
            +S +   WK  + L +LK++ LSHS+ L   PDF+  P LE LIL+ C RL ++H S+ 
Sbjct: 614 KHSNLRLFWKESQVLGQLKMLNLSHSKYLTETPDFSKLPKLENLILKDCPRLCKVHKSIG 673

Query: 477 -LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
            LHN L+++N  DCTS                 L +LP     LK + TL +SG LK  +
Sbjct: 674 DLHN-LLLINWTDCTS-----------------LGNLPRRAYELKSVKTLILSGCLKIDK 715

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSI 563
             E +  ME L+ L  E TA++ +P S+
Sbjct: 716 LEENIMQMESLTTLIAENTAVKKVPFSV 743



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 173/402 (43%), Gaps = 37/402 (9%)

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           + L  ++ +G  ++ +P +   L G++ ++LK+  +L +       L  L+ L LS    
Sbjct: 584 KQLRWINWQGFPLKYIPKTF-YLEGVIAIDLKHS-NLRLFWKESQVLGQLKMLNLSHSKY 641

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
           L + P+  +  K  + +  D   + +V  SI  L  L L+N +DC +L  LP     LKS
Sbjct: 642 LTETPDFSKLPKLENLILKDCPRLCKVHKSIGDLHNLLLINWTDCTSLGNLPRRAYELKS 701

Query: 664 LKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHS---TSWYSYIPINLMR--- 714
           +KTL LSGC K++ + E + Q+ESL  L    TAV   P S   +    YI +   +   
Sbjct: 702 VKTLILSGCLKIDKLEENIMQMESLTTLIAENTAVKKVPFSVVRSKSIGYISVGGFKGLA 761

Query: 715 ----KSVAL-----------KLPSLSGLCS-LRKLNLTDCNLMEGALPSDIGNLCSLKEL 758
                S+ L           ++P   G+ S + ++++ + NL  G L     +L +L+ +
Sbjct: 762 HDVFPSIILSWMSPTMNPLSRIPPFLGISSSIVRMDMQNSNL--GDLAPMFSSLSNLRSV 819

Query: 759 YLSKNSFVSLPTSI-THLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDAL 817
            +  ++   L   + T L  L  +   + K      Q+     +  + G  S   +++ L
Sbjct: 820 LVQCDTESQLSKQLRTILDDLHCVNFTELKITSYTSQISKQSLESYLIGIGSFEEVINTL 879

Query: 818 KLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQN 877
             CKS S + +   SL L      ++ +   ++     T +   V +PG   P W     
Sbjct: 880 --CKSISEVPSLHLSL-LTFTTHFSYQLSFLFMLQGLATSEGCDVFLPGDNYPYWLARTG 936

Query: 878 EGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGS 919
           +G S+    P +     ++ G A+C V+     S    C  S
Sbjct: 937 KGHSVYFIVPEDC----RMKGMALCVVYVSAPESTATECLIS 974


>gi|357469145|ref|XP_003604857.1| NBS-LRR resistance protein [Medicago truncatula]
 gi|355505912|gb|AES87054.1| NBS-LRR resistance protein [Medicago truncatula]
          Length = 1684

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 233/567 (41%), Positives = 348/567 (61%), Gaps = 26/567 (4%)

Query: 1    MDSRCEKLRFLMD-SGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            ++SR E +  L++   S DV ++GI GMGG+GKTT+A+ +Y+ I  +FE   FL N+RE+
Sbjct: 693  VESRVEAVTKLLNIQNSDDVLILGIWGMGGMGKTTLAKAIYNQIGSKFEGRSFLLNIREL 752

Query: 60   -SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
              +    VSLQ+++L  + K     I ++  G +ML  +L + +VLLV DDV +++QL++
Sbjct: 753  WETDTNQVSLQQKILDDVYKTLTFKIRDLESGKNMLKEKLSQNRVLLVFDDVNELEQLKA 812

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            L G+R+WFG GSRIIIT+RD HLL+  GV ++Y    ++  E+L+LF+  AFK   P ++
Sbjct: 813  LCGSRDWFGPGSRIIITTRDMHLLRLCGVYQMYTIEEMDKIESLKLFSWHAFKQPSPKED 872

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
                S  +I Y+GGLPLALEVLGS+L+   + EW+  LE+L+  P  ++ + L++SF GL
Sbjct: 873  FATHSTDVIAYSGGLPLALEVLGSYLADCEITEWQYVLEKLKCIPHDQVQEKLKVSFHGL 932

Query: 239  QEL-EKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHD 296
            ++  EK+IFLDIACFF G D+  V   L GCGF   IGI+VL+E+ L+TV N N L MHD
Sbjct: 933  KDFTEKQIFLDIACFFIGMDKKDVIQILNGCGFFADIGIKVLVERALVTVDNRNKLRMHD 992

Query: 297  LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
            LL+++G+QI+  ++P +  KRSRLW+  EV  +L +  GTE V+G+ L+    +     C
Sbjct: 993  LLRDMGRQIIYEEAPSDPEKRSRLWRHGEVFDILEKRKGTEAVKGLALEFPRKD-----C 1047

Query: 357  ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
               KAF KM  LRLL++  ++L    +YLS  L+ L W G+     P+  Q    + + +
Sbjct: 1048 LETKAFKKMNKLRLLRLAGVKLKGDFKYLSGDLKWLYWHGFAEPCFPAEFQQGSLVSVEL 1107

Query: 417  CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             YSR+ +LW   + L+ LK++ LSHS +L   PDF+  PNLEKL+L+ C  L  +  S+ 
Sbjct: 1108 KYSRLKQLWNKCQMLENLKILNLSHSLDLTETPDFSYLPNLEKLVLKNCPSLSTVSHSIG 1167

Query: 477  LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
              +KLI++N++ CT                  L+ LP +I  LK L TL +SG     + 
Sbjct: 1168 SLHKLILINLRGCT-----------------GLRKLPRSIYKLKSLETLILSGCSMIEKL 1210

Query: 537  PEIVEHMEHLSELHLEGTAIRGLPLSI 563
             E +E ME L  L  + TAI  +P SI
Sbjct: 1211 EEDLEQMESLITLIADKTAITKVPFSI 1237



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/297 (36%), Positives = 168/297 (56%), Gaps = 33/297 (11%)

Query: 21  MIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLA 80
           +IGI GM G+GK+TIA+ +YD I   FE   FL ++                        
Sbjct: 234 IIGIWGMTGIGKSTIAQAIYDQIGLYFEHKSFLKDL------------------------ 269

Query: 81  DNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA--GNREWFGSGSRIIITSRD 138
              +W   +   +L    Q  +VLLV+D++  ++QL  L    +R+WFG GS+IIIT+RD
Sbjct: 270 -GVLWEEQNHDQVLFKGHQHHRVLLVLDNIDKLEQLDVLGLRRSRKWFGEGSKIIITTRD 328

Query: 139 EHLLKTHGVDEVYKPHGLNYDEALQLFNMKAF-KTYQPLQECVQLSARIIRYAGGLPLAL 197
            HLLK HG+D +Y+   L+  E+L++FN+ AF +   P ++  +LS +++ Y+ GLPLAL
Sbjct: 329 RHLLKKHGIDHIYRVKELDESESLKVFNLAAFSQATTPQEDFSELSRQLVAYSRGLPLAL 388

Query: 198 EVLGSFLSGRSVDEWRS---TLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFK 254
           + LG FL+G    +W++   +L+RL I P   + + L+ SF  L + EK+IFLDIAC F 
Sbjct: 389 KELGFFLNGEEALKWKNVLKSLKRLSI-PAPRLQEALEKSFSDLSDEEKRIFLDIACLFV 447

Query: 255 GNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELGQQIVQRQS 310
           G + + V   L        + I  L +K  +T+  NN L +H LLQ + + I++R+S
Sbjct: 448 GMNLNDVKQILNRSTQSAALEISNLEDKSFLTIDENNKLGIHVLLQAMARDIIKRKS 504



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 2/139 (1%)

Query: 497  GKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TA 555
            G ++   L+   LK L      L+ L  L++S  L   E P+   ++ +L +L L+   +
Sbjct: 1100 GSLVSVELKYSRLKQLWNKCQMLENLKILNLSHSLDLTETPDF-SYLPNLEKLVLKNCPS 1158

Query: 556  IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMK 615
            +  +  SI  L  L+L+NL+ C  L  LP ++  LK L +L LSGCS ++K  E +  M+
Sbjct: 1159 LSTVSHSIGSLHKLILINLRGCTGLRKLPRSIYKLKSLETLILSGCSMIEKLEEDLEQME 1218

Query: 616  DLSELFLDGTSIKEVPSSI 634
             L  L  D T+I +VP SI
Sbjct: 1219 SLITLIADKTAITKVPFSI 1237



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 91/189 (48%), Gaps = 26/189 (13%)

Query: 527  VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVT 586
            +SGDLK+               L+  G A    P   +  S LV + LK  R L+ L   
Sbjct: 1076 LSGDLKW---------------LYWHGFAEPCFPAEFQQGS-LVSVELKYSR-LKQLWNK 1118

Query: 587  VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNL 645
               L+ L+ L LS    L + P+    + +L +L L    S+  V  SI  L KL L+NL
Sbjct: 1119 CQMLENLKILNLSHSLDLTETPDF-SYLPNLEKLVLKNCPSLSTVSHSIGSLHKLILINL 1177

Query: 646  SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWY 705
              C  L +LP SI  LKSL+TL LSGC  +E + E L Q+ESL  L    TA+       
Sbjct: 1178 RGCTGLRKLPRSIYKLKSLETLILSGCSMIEKLEEDLEQMESLITLIADKTAI------- 1230

Query: 706  SYIPINLMR 714
            + +P +++R
Sbjct: 1231 TKVPFSIVR 1239


>gi|307135798|gb|ADN33677.1| TIR-LRR-NBS disease resistance protein [Cucumis melo subsp. melo]
          Length = 1139

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 337/1033 (32%), Positives = 511/1033 (49%), Gaps = 157/1033 (15%)

Query: 1    MDSRCEKLRFLMDS-GSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            ++SR  K+  L+   G   V M+G+ G+GG+GKTT+A+ +Y+ I+ +FE S FL +VR  
Sbjct: 68   VNSRLRKIEELVSHIGFEGVNMVGMYGIGGIGKTTLAKALYNKIATQFEGSCFLLDVRRE 127

Query: 60   SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            +SK GL+ LQ+ LL+++LK  D  + N   GI+++ SRL  KKVL+V+DDV    QL++L
Sbjct: 128  ASKHGLIQLQKTLLNEILK-EDLKVVNCDKGINIIRSRLCSKKVLIVLDDVDHRDQLEAL 186

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
             G R+WF  GS+II+T+R++HLL +HG DE++   GLN D+A++LF+  AFK   P    
Sbjct: 187  VGERDWFCQGSKIIVTTRNKHLLSSHGFDEIHNILGLNEDKAIELFSWHAFKKNHPSSNY 246

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
              LS R+  Y  G PLAL VLGSFL  R   EW S L+  E     +I DILQ+SFDGL+
Sbjct: 247  FDLSERVTSYCKGHPLALVVLGSFLCNRDQVEWCSILDEFENSLNKDIKDILQLSFDGLE 306

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
            +  K IFLDI+C   G   +YV + L  C                               
Sbjct: 307  DKVKDIFLDISCLLVGEKVEYVKDTLSAC------------------------------- 335

Query: 300  ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
             +G +IV  +S  ELGKRSRLW E++V  V + ++GT  ++ I L+ +H  N   L    
Sbjct: 336  HMGHKIVCGESL-ELGKRSRLWLEKDVLEVFSSNSGTSAIKAIKLE-FH--NPTRLIVDP 391

Query: 360  KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
            +AF  + NLRLL + N +    ++YL   L+ + W G+    LPS+  +   + + + +S
Sbjct: 392  QAFRNLKNLRLLIVRNARFCAKIKYLPESLKWIEWHGFSQPSLPSHFIVKNLVGLDLQHS 451

Query: 420  RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
             I +    +K  + LK + LS+S +L ++PDF+ A NLEKL L  CT L  IH S+    
Sbjct: 452  FIKDFGNRLKVGEWLKHVNLSYSTSLKKIPDFSAASNLEKLYLRDCTNLRTIHRSIFCLV 511

Query: 480  KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
            KL +L +  C                   +K LPT+   L  L  LD+SG  K  + P+ 
Sbjct: 512  KLTLLCLSGCCM-----------------IKKLPTSCFKLWSLKHLDLSGCTKLEKIPDF 554

Query: 540  VEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKL 598
               + +L  LHL   T +R +  S+  L  L+ L L  C +L+ LP +   L  L +L L
Sbjct: 555  SSAL-NLEILHLSRCTNLRTIHNSVFSLHKLISLYLDFCSTLKTLPTSCFMLTSLNTLTL 613

Query: 599  SGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSS 657
              C KL++ P++  S  +L+ L ++  T+++ +  SI  L +L+ L    C NLV+LP S
Sbjct: 614  YSCQKLEEVPDL-SSASNLNSLNVEKCTNLRGIHESIGSLDRLQTLVSRKCTNLVKLP-S 671

Query: 658  IIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSV 717
            I+ LKSLK L+LS C KLE+ P     ++SL  LD+S TA+                   
Sbjct: 672  ILRLKSLKHLDLSWCSKLESFPIIDENMKSLRFLDLSFTAIK------------------ 713

Query: 718  ALKLPSLSG-LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLS 776
               LPS  G L  L +LNL +C                         S +SLP +I+ L 
Sbjct: 714  --DLPSSIGYLTELPRLNLGNC------------------------TSLISLPKTISLLM 747

Query: 777  KLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLL 836
             LL++EL +C+ LQ +P LP NI+ +   GC  L          KS   ++  +   + L
Sbjct: 748  SLLDLELRNCRSLQEIPNLPQNIQNLDAYGCELLT---------KSPDNIVDIISQKQDL 798

Query: 837  GNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKL 896
                ++    RE+L             + G EIP+WF Y+   + ++ +       ++ L
Sbjct: 799  TLGEIS----REFL-------------LMGVEIPKWFSYKTTSNLVSASFRHYSDMERTL 841

Query: 897  VGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLS 956
               A C  F V  +S        +  ++ +C          F   F  + S+++WL+  S
Sbjct: 842  ---AACVSFKVNGDSSRRISCNIFICNRFHC---------SFSRPFLPSKSEYMWLVTTS 889

Query: 957  RQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEELDQTTNQP 1016
                         +L+  + N V V FE      L ++  G+H      V E    T   
Sbjct: 890  LAW---------GSLDAQDWNKVVVLFEVDDEVNLSIRSYGVH------VTEEFNGTQTD 934

Query: 1017 SRFTVYNLNEFDQ 1029
             ++ V N  +F Q
Sbjct: 935  VKWPVVNYGDFYQ 947


>gi|93117599|gb|ABE99702.1| TIR-NBS-LRR disease resistance-like protein [Populus trichocarpa]
          Length = 1142

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 262/666 (39%), Positives = 393/666 (59%), Gaps = 25/666 (3%)

Query: 11  LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKG-GLVSLQ 69
            + + + +VR++GI GM G+GKT+IA+VV++   + FE S FL N+ E S +  GLV LQ
Sbjct: 231 FLSTAADEVRIVGIHGMPGIGKTSIAKVVFNQFCYRFEGSCFLSNINETSEQSNGLVLLQ 290

Query: 70  RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG 129
            QLL  +LK    +I NV  G+ ++  R+  K+VL+V+DD+    QL +L G R WFG G
Sbjct: 291 EQLLHDILKQNTVNISNVVRGLVLIKERICHKRVLVVVDDLAHQNQLNALMGERSWFGPG 350

Query: 130 SRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRY 189
           SR+IIT++DEHLL    VD  Y+   L  DE+LQLF+  AF   +P ++ V+LS  ++ Y
Sbjct: 351 SRVIITTKDEHLLLK--VDRTYRVEELKRDESLQLFSWHAFGDTKPAKDYVELSNDVVDY 408

Query: 190 AGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELE-KKIFLD 248
            GGLPLALEVLGS LSG++   W+  ++ L   P  EI   L+ISFD L + E +  FLD
Sbjct: 409 CGGLPLALEVLGSCLSGKNRARWKCLIDELRKIPNREIQKKLRISFDSLDDHELQNTFLD 468

Query: 249 IACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQELGQQIV 306
           IACFF G +++YV   LE  CG++P   +  L E+ LI V     + MHDLL+++G+ I+
Sbjct: 469 IACFFIGRNKEYVAKVLEARCGYNPEDDLGTLSERSLIKVDAFGKISMHDLLRDMGRDII 528

Query: 307 QRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMT 366
            ++SP   GKRSR+W+ E+  +VL +  GTE+VEG+ LD    E++     S  +F+KM 
Sbjct: 529 HKESPGHPGKRSRIWQREDAWNVLNKHMGTEVVEGLALDARASEDK---SLSTGSFTKMR 585

Query: 367 NLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWK 426
            L+LL+I  + L    + LS  L  + W   PLK  PS+L +D  + + M +S I ELWK
Sbjct: 586 FLKLLQINGVHLTGPFKLLSEELIWICWLECPLKSFPSDLMLDNLVVLDMQHSNIKELWK 645

Query: 427 GIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNM 486
             K L+KLK++ LSHS++LI+ P+   + +LEKL+LEGC+ L E+H S+     LI+LN+
Sbjct: 646 EKKILNKLKILNLSHSKHLIKTPNLHSS-SLEKLMLEGCSSLVEVHQSVGHLKSLILLNL 704

Query: 487 KDCTSLITLPGKIL-MKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
           K C  +  LP  I  + SL+ LN      L+ LP  +S +K L+ L ++ +++  +F   
Sbjct: 705 KGCWRIKILPESICDVNSLKSLNISGCSQLEKLPERMSDIKSLTEL-LADEIQNEQFLSS 763

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLV--LLNLKNCRSLEILPVTVSNLKCLRSLK 597
           + H++HL +L L  +      LS       +   ++    R    LP +  + + ++ LK
Sbjct: 764 IGHLKHLRKLSLRVSNFNQDSLSSTSCPSPISTWISASVLRVQPFLPTSFIDWRSVKRLK 823

Query: 598 LS--GCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV--- 652
           L+  G S+          +  L EL L G     +PS I +LTKL+ L + +C NLV   
Sbjct: 824 LANYGLSESATNCVYFGGLSSLQELNLSGNKFLSLPSGISVLTKLQHLRVQNCSNLVSIS 883

Query: 653 RLPSSI 658
            LPSS+
Sbjct: 884 ELPSSL 889



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 180/376 (47%), Gaps = 61/376 (16%)

Query: 565 LLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG 624
           +L  LV+L++++    E+       L  L+ L LS    L K P +  S   L +L L+G
Sbjct: 626 MLDNLVVLDMQHSNIKELWKEK-KILNKLKILNLSHSKHLIKTPNLHSS--SLEKLMLEG 682

Query: 625 -TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLG 683
            +S+ EV  S+  L  L LLNL  C  +  LP SI  + SLK+LN+SGC +LE +PE + 
Sbjct: 683 CSSLVEVHQSVGHLKSLILLNLKGCWRIKILPESICDVNSLKSLNISGCSQLEKLPERMS 742

Query: 684 QIESLEEL---------------------------------DISGTAVPHSTSWYSYIPI 710
            I+SL EL                                  +S T+ P   S  ++I  
Sbjct: 743 DIKSLTELLADEIQNEQFLSSIGHLKHLRKLSLRVSNFNQDSLSSTSCPSPIS--TWISA 800

Query: 711 NLMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPS-DIGNLCSLKELYLSKNSFVSL 768
           +++R  V   LP S     S+++L L +  L E A      G L SL+EL LS N F+SL
Sbjct: 801 SVLR--VQPFLPTSFIDWRSVKRLKLANYGLSESATNCVYFGGLSSLQELNLSGNKFLSL 858

Query: 769 PTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDS--TM 826
           P+ I+ L+KL ++ +++C  L S+ +LP ++ ++  + C S+  +   ++  K++   ++
Sbjct: 859 PSGISVLTKLQHLRVQNCSNLVSISELPSSLEKLYADSCRSMKRVCLPIQ-SKTNPILSL 917

Query: 827 IACLDSLKLLGNKSLA------FS---------MLREYLEAVSNTRQHLSVVVPGSEIPE 871
             C + +++ G + L+      FS           + ++EA+ +      +   G  +P 
Sbjct: 918 EGCGNLIEIQGMEGLSNHGWVIFSSGCCDLSNNSKKSFVEALRSGGYGYQIHFDGGTMPS 977

Query: 872 WFMYQNEGSSITVTRP 887
           W  +  EGSS++   P
Sbjct: 978 WLSFHGEGSSLSFHVP 993


>gi|255553307|ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223543328|gb|EEF44860.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1186

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 296/766 (38%), Positives = 419/766 (54%), Gaps = 104/766 (13%)

Query: 2   DSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS 61
           +SR  ++   +  GS DV +  I G+GG+GKTTIA++VY+     F+   FL NV+EIS 
Sbjct: 199 ESRMARITRWLRDGSDDVEIATIYGIGGIGKTTIAKIVYNQNFRSFDGRSFLANVKEISE 258

Query: 62  K-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +  GL  LQRQLLS LLK   + I+NV +GI  +   L +K+VLL++DDV D++Q  ++ 
Sbjct: 259 QPNGLARLQRQLLSDLLKKNTSKIYNVDEGIMKIKDALFQKRVLLILDDVDDLEQFNAIV 318

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
             REW   GS+IIIT+R EHL    G+   ++   LN  E+LQLF   AF+   P     
Sbjct: 319 AMREWCHPGSKIIITTRHEHLQGVDGICRRFEVEKLNDKESLQLFCWHAFRQDHPADGYE 378

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ- 239
           + S  ++ + GGLPLAL+VLGS LSG++V  W S LE+LE    S+I  IL+ISFD LQ 
Sbjct: 379 KHSKDVVHHCGGLPLALQVLGSSLSGKTVSVWESALEKLEKVADSKIQHILRISFDSLQD 438

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWMHDLL 298
           + +K++FLDIACFF G D  YV   L+GCGF+ VIGI+ LI++CLIT+ +   L MH LL
Sbjct: 439 DHDKRLFLDIACFFTGMDIGYVFRILDGCGFYAVIGIQNLIDRCLITISDKYKLMMHQLL 498

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVL-------------- 344
            ++G++IV+++SP++ GKRSRLW  ++   VL ++TGTE ++G++L              
Sbjct: 499 GDMGREIVRQESPDDPGKRSRLWDPKDATKVLRQNTGTESIKGLILKLPTQTENKRTRKD 558

Query: 345 ---DNYHHENEVYLCA--------------------SAKAFSKMTNLRLLKICNLQLPNG 381
              D+     E  L                      S KAF KM  L+LL +  ++L  G
Sbjct: 559 ATADHTKENGEEDLSDDLLDQKSYSKKPNTSPTNSFSTKAFEKMVRLKLLNLNYVELSEG 618

Query: 382 LEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSH 441
            +     L  L WRG+ L  LP++L +DK + + M  S +  LWKGI+ L +LKV+ LSH
Sbjct: 619 YKKFPKGLVWLCWRGFSLNALPTDLCLDKLVALDMRNSNLKYLWKGIRFLVELKVLNLSH 678

Query: 442 SENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILM 501
           S  L+R P+FTG P LEKL+L+ C  L ++  S+   +KLII N+KDC            
Sbjct: 679 SHGLVRTPNFTGLPTLEKLVLKDCKDLVDVDKSIGGLDKLIIFNLKDCK----------- 727

Query: 502 KSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAI----- 556
                 NLK LP  I+ L  L  L +SG L   E P+ +E+++ L  LHL+G  +     
Sbjct: 728 ------NLKKLPVEITMLHSLEELILSGCLNLVELPKDLENLQSLRVLHLDGIPMNQVNS 781

Query: 557 -----RGLPLSIELLSG---------------------LVLLNLKN-CRSLEILPVTVSN 589
                + L LS++ L+                      LV L+L + C S  ++P  +S 
Sbjct: 782 ITEDFKELSLSLQHLTSRSWLLQRWAKSRFSLSSLPRFLVSLSLADCCLSDNVIPGDLSC 841

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDC 648
           L  L  L LSG +  +  PE + S+  L  L LD   S+K +P   EL T L  L   DC
Sbjct: 842 LPSLEYLNLSG-NPFRFLPESINSLGMLHSLVLDRCISLKSIP---ELPTDLNSLKAEDC 897

Query: 649 KNLVRLPSSIIALKSLKTLNLSGC---------FKLENVPETLGQI 685
            +L R+ +    LKSL  L + GC         FKLE V     QI
Sbjct: 898 TSLERITNLPNLLKSL-NLEIFGCDSLVEVQGLFKLEPVGNINTQI 942



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 153/526 (29%), Positives = 232/526 (44%), Gaps = 86/526 (16%)

Query: 533  FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKC 592
            +++FP+       L  L   G ++  LP  +  L  LV L+++N  +L+ L   +  L  
Sbjct: 619  YKKFPK------GLVWLCWRGFSLNALPTDL-CLDKLVALDMRNS-NLKYLWKGIRFLVE 670

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNL 651
            L+ L LS    L + P     +  L +L L D   + +V  SI  L KL + NL DCKNL
Sbjct: 671  LKVLNLSHSHGLVRTPNFT-GLPTLEKLVLKDCKDLVDVDKSIGGLDKLIIFNLKDCKNL 729

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG---TAVPHSTSWYSYI 708
             +LP  I  L SL+ L LSGC  L  +P+ L  ++SL  L + G     V   T  +  +
Sbjct: 730  KKLPVEITMLHSLEELILSGCLNLVELPKDLENLQSLRVLHLDGIPMNQVNSITEDFKEL 789

Query: 709  PINLMR--------KSVALKLPSLSGLCS-LRKLNLTDCNLMEGALPSDIGNLCSLKELY 759
             ++L          +  A    SLS L   L  L+L DC L +  +P D+  L SL+ L 
Sbjct: 790  SLSLQHLTSRSWLLQRWAKSRFSLSSLPRFLVSLSLADCCLSDNVIPGDLSCLPSLEYLN 849

Query: 760  LSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKL 819
            LS N F  LP SI  L  L ++ L+ C  L+S+P+LP ++  ++   C SL  + +   L
Sbjct: 850  LSGNPFRFLPESINSLGMLHSLVLDRCISLKSIPELPTDLNSLKAEDCTSLERITNLPNL 909

Query: 820  CKSDSTMIACLDS---------LKLLGN------KSLAFSMLR-------EYLEAVSNTR 857
             KS +  I   DS         L+ +GN      KS+    L        E   A++ T 
Sbjct: 910  LKSLNLEIFGCDSLVEVQGLFKLEPVGNINTQILKSVGLINLESLKGVEVEMFNALACTE 969

Query: 858  QHLSVVV-----------PGSEIPEWFMYQNEGSSITV---TRPSNLYNKKKLVGYAICC 903
               S+ V           PG+ IPEWF  ++E SSI+     +P +     K+ G ++C 
Sbjct: 970  MRTSIQVLQECGIFSIFLPGNTIPEWFNQRSESSSISFEVEAKPGH-----KIKGLSLCT 1024

Query: 904  VFHVLKNSRGN----NCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQT 959
            ++   K   G     NC  +   ++  C      Y   F   +G        +L+LS  T
Sbjct: 1025 LYTYDKLEGGGYIDENC--AKINNKTICE--KWTYSPTF---YGMPKPLEE-MLWLSHWT 1076

Query: 960  CYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDE 1005
              D        LE  +  H+ V     +  GL VK CG+  +Y +E
Sbjct: 1077 FGD-------QLEVGDEVHILVE----MASGLTVKKCGIRLIYEEE 1111


>gi|297741883|emb|CBI33318.3| unnamed protein product [Vitis vinifera]
          Length = 1333

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 269/666 (40%), Positives = 386/666 (57%), Gaps = 62/666 (9%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EKL+ LM++  + V +IGI G+GG+GKTTIA+ +Y+ ISH+++ S FL N++E  SKG +
Sbjct: 40  EKLKSLMNTELNMVSVIGIYGIGGVGKTTIAKAIYNEISHQYDGSSFLINIKE-RSKGDI 98

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
           + LQ++LL  +L+     I NV +G  M+   L+  +VL++ DDV ++KQL+ LA  ++W
Sbjct: 99  LQLQQELLHGILRGKFFKINNVNEGNSMIKRCLRSNRVLVIFDDVDELKQLEYLAEEKDW 158

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSAR 185
           F + S IIITSRD+H+L  +GVD  Y+   LN +EA++LF++ AFK  +P +    LS  
Sbjct: 159 FHAKSTIIITSRDKHVLAQYGVDIPYEVSKLNKEEAIELFSLWAFKQNRPQEVYKNLSYN 218

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           II YA GLPLAL+VLG+ L G+ +  W S L +L+I P  EI ++L+ISFDGL ++EK I
Sbjct: 219 IIDYADGLPLALKVLGASLFGKKISNWESALCKLKIIPHMEIHNVLRISFDGLDDIEKGI 278

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQI 305
           FLDIACFFKG+DRD+V+  L   G H    I  L ++CLITV  N L MHDL+Q++G +I
Sbjct: 279 FLDIACFFKGDDRDFVSRIL---GPHAEHAITTLDDRCLITVSKNMLDMHDLIQQMGWEI 335

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKM 365
           ++++ PE+ G+RSRLW +     VL  + GT  +EG+ LD         L  + ++F +M
Sbjct: 336 IRQECPEDPGRRSRLW-DSNANDVLIRNKGTRAIEGLFLDRCKFNP---LQITTESFKEM 391

Query: 366 TNLRLLKICNLQ---------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
             LRLL I N +         LP   E+ S  L  L W GYPL+ LP N      +++ +
Sbjct: 392 NRLRLLNIHNPREDQLFLKDHLPRDFEFSSYELTYLHWDGYPLESLPMNFHAKNLVQLVL 451

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             S I ++W+G K  DKL+V+ LS+S +LI +PDF+  PNLE LIL GC           
Sbjct: 452 RGSNIKQVWRGNKLHDKLRVIDLSYSFHLIGIPDFSSVPNLEILILIGC----------- 500

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
                                         +NL+ LP  I  LK L  L  +G  K   F
Sbjct: 501 ------------------------------VNLELLPRNIYKLKHLQILSCNGCSKLERF 530

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
           PEI  +M  L  L L GTAI  LP SI  L+GL  L L+ C  L  +P+ + +L  L  L
Sbjct: 531 PEIKGNMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLQECSKLHKIPIHICHLSSLEVL 590

Query: 597 KLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL---V 652
            L  C+ ++   P  +  +  L +L L+      +P++I  L+ LE+LNLS C NL    
Sbjct: 591 DLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSSLEVLNLSHCNNLEQIT 650

Query: 653 RLPSSI 658
            LPS +
Sbjct: 651 ELPSCL 656



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 208/465 (44%), Gaps = 80/465 (17%)

Query: 556  IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMK 615
            I G PL ++ L       L++C++L  LP ++   K L +L  SGCS+L+  PEI++ M+
Sbjct: 940  IIGNPLELDSLC------LRDCKNLTSLPSSIFGFKSLATLSCSGCSQLESIPEILQDME 993

Query: 616  DLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
             L +L L GT+IKE+PSSI+ L  L+ L LS+CKNLV LP SI  L SLK L +  C   
Sbjct: 994  SLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVESCPSF 1053

Query: 676  ENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNL 735
            + +P+ LG+++SL  L +               P++    S+  +LPSLSGLCSLR+L L
Sbjct: 1054 KKLPDNLGRLQSLLHLSVG--------------PLD----SMNFQLPSLSGLCSLRQLEL 1095

Query: 736  TDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQL 795
              CN+ E                         +P+ I +LS L+ I +   K       +
Sbjct: 1096 QACNIRE-------------------------IPSEICYLSSLMPITVHPWK-------I 1123

Query: 796  PPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSN 855
             P      VN   S +   + L         I+   S  +   + + F   RE+  +V  
Sbjct: 1124 YP------VNQIYSGLLYSNVLNSKFRYGFHISFNLSFSIDKIQRVIFVQGREFRRSVR- 1176

Query: 856  TRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVL----KNS 911
                 +     + IPEW  +Q  G  IT+  P + Y     +G+ +C ++  L    K  
Sbjct: 1177 -----TFFAESNGIPEWISHQKSGFKITMKLPWSWYENDDFLGFVLCSLYVPLEIETKTH 1231

Query: 912  RGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNL 971
            R  +C  ++     +               + +  S+   L+Y S+    DI     SN 
Sbjct: 1232 RIFSCILNFGDDSDSFLFDDLRLEQICECCYYEDASNQGLLVYYSKS---DIPEKFHSN- 1287

Query: 972  EPFESNHVNVSFEPWLG-QGLEVKMCGLHPVYMDEVEELDQTTNQ 1015
               E   +N SF  + G + ++   CG H +Y  + E+ + T  Q
Sbjct: 1288 ---EWRTLNASFNVYFGIKPVKAARCGFHFLYAHDYEQNNLTMVQ 1329



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 160/320 (50%), Gaps = 42/320 (13%)

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLS-----------------------DCKNL 651
           K+L +L L G++IK+V    +L  KL +++LS                        C NL
Sbjct: 444 KNLVQLVLRGSNIKQVWRGNKLHDKLRVIDLSYSFHLIGIPDFSSVPNLEILILIGCVNL 503

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYI 708
             LP +I  LK L+ L+ +GC KLE  PE  G +  L  LD+SGTA+   P S +  + +
Sbjct: 504 ELLPRNIYKLKHLQILSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIMDLPSSITHLNGL 563

Query: 709 PINLMRKSVAL-KLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFV 766
              L+++   L K+P  +  L SL  L+L  CN+MEG +PSDI +L SL++L L +  F 
Sbjct: 564 QTLLLQECSKLHKIPIHICHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFS 623

Query: 767 SLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTM 826
           S+PT+I  LS L  + L  C  L+ + +LP  +R +  +G     +    L L     ++
Sbjct: 624 SIPTTINQLSSLEVLNLSHCNNLEQITELPSCLRLLDAHGSNRTSSRAPFLPL----HSL 679

Query: 827 IACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSE-IPEWFMYQNEGSSITVT 885
           + C    +   + S   S         S   +   +V+PGS+ IPEW + + +  S  + 
Sbjct: 680 VNCFRWAQDWKHTSFRDS---------SYHGKGTCIVLPGSDGIPEWILNRGDNFSSVIE 730

Query: 886 RPSNLYNKKKLVGYAICCVF 905
            P N +   + +G+AICCV+
Sbjct: 731 LPQNWHQNNEFLGFAICCVY 750



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 90/160 (56%), Gaps = 6/160 (3%)

Query: 508  NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
            NL SLP++I G K L+TL  SG  +    PEI++ ME L +L L GTAI+ +P SI+ L 
Sbjct: 957  NLTSLPSSIFGFKSLATLSCSGCSQLESIPEILQDMESLRKLSLSGTAIKEIPSSIQRLR 1016

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF---LDG 624
            GL  L L NC++L  LP ++ NL  L+ L +  C   KK P+ +  ++ L  L    LD 
Sbjct: 1017 GLQYLLLSNCKNLVNLPESICNLTSLKFLIVESCPSFKKLPDNLGRLQSLLHLSVGPLDS 1076

Query: 625  TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSL 664
             +  ++P S+  L  L  L L  C N+  +PS I  L SL
Sbjct: 1077 MNF-QLP-SLSGLCSLRQLELQAC-NIREIPSEICYLSSL 1113



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 103/193 (53%), Gaps = 23/193 (11%)

Query: 558 GLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDL 617
           G+P     +  L +L L  C +LE+LP  +  LK L+ L  +GCSKL++FPEI  +M+ L
Sbjct: 482 GIP-DFSSVPNLEILILIGCVNLELLPRNIYKLKHLQILSCNGCSKLERFPEIKGNMRKL 540

Query: 618 SELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE- 676
             L L GT+I ++PSSI  L  L+ L L +C  L ++P  I  L SL+ L+L  C  +E 
Sbjct: 541 RVLDLSGTAIMDLPSSITHLNGLQTLLLQECSKLHKIPIHICHLSSLEVLDLGHCNIMEG 600

Query: 677 NVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLT 736
            +P  +  + SL++L++           +S IP             +++ L SL  LNL+
Sbjct: 601 GIPSDICHLSSLQKLNL-------ERGHFSSIPT------------TINQLSSLEVLNLS 641

Query: 737 DCNLME--GALPS 747
            CN +E    LPS
Sbjct: 642 HCNNLEQITELPS 654


>gi|357474825|ref|XP_003607698.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508753|gb|AES89895.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1165

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 254/639 (39%), Positives = 380/639 (59%), Gaps = 24/639 (3%)

Query: 20  RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKL 79
           R++GI GMGG+GKTT+AR++Y  IS  F+A  F+D++ +I    G V+ Q+Q+LSQ L  
Sbjct: 222 RIVGISGMGGVGKTTLARILYRRISSRFDACCFIDDLSKICKHAGPVAAQKQILSQTLGE 281

Query: 80  ADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDE 139
               I N+ DG +++ +RL   +  +++D+V   +QL+ LA NR+  G GSRIII SRD 
Sbjct: 282 EHLQICNLSDGANLIQNRLGHLRAFIILDNVDQGEQLEKLALNRKLLGVGSRIIIISRDT 341

Query: 140 HLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEV 199
           H+L  +GVD V+K   LN   +LQLF  +AFK    L    +L   I+ YA GLPLA++ 
Sbjct: 342 HILNRYGVDVVFKVPLLNQTNSLQLFCQQAFKRDNILSNYDELVYEILNYANGLPLAIKA 401

Query: 200 LGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRD 259
           LGSFL GR + EWRS L RL   P  +I D+L++SFDGL+ +EK+IFLDIACFF G    
Sbjct: 402 LGSFLFGRDIYEWRSALTRLRDNPNKDIFDVLRLSFDGLENMEKEIFLDIACFFNGRKEA 461

Query: 260 YVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT-LWMHDLLQELGQQIVQRQSPEELGKRS 318
            V N L  CGFH  IG+RVLI+K LI++   + + MH LL+ELG++IVQ  S ++  K +
Sbjct: 462 LVKNVLNCCGFHADIGLRVLIDKSLISISEKSKIEMHGLLEELGKKIVQENSSKDSRKWT 521

Query: 319 RLWKEEEVCHVLTESTGTELVEGIVL-DNYHHENEVYLCASAKAFSKMTNLRLLKICNLQ 377
           RLW  E   +V++E+     VE IVL      E ++ +   A+A SKM++LR+L +  + 
Sbjct: 522 RLWLHEYFNNVMSENKEKN-VEAIVLRRGRQRETKIVI---AEALSKMSHLRMLILDGMD 577

Query: 378 LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVM 437
               L+ +SN LR + WR YP  +LPS+ Q  + +E+ +  S I +LW+G K+L  L+ +
Sbjct: 578 FSGSLDCISNELRYVEWREYPFMYLPSSFQPYQLVELILEDSSIKQLWEGTKYLPNLRTL 637

Query: 438 ILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPG 497
            L +S++LI++PDF   PNLE+L L+GC +L +I PS+ +  KL+ LN++DC +L+T+P 
Sbjct: 638 ELRNSKSLIKVPDFGEIPNLERLNLKGCVKLEQIDPSISVLRKLVYLNLEDCKNLVTIPN 697

Query: 498 KIL-MKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAI 556
            +  + SLE LNL           C    + S  LK       ++  E  S    + +  
Sbjct: 698 DLFGLTSLEYLNLSG---------CYKAFNTSLHLK-----NYIDSSESASHSQSKFSIF 743

Query: 557 RGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKD 616
             + L ++ +     L++       +LP ++ +L CLR L +S CS L + P+ +  +  
Sbjct: 744 DWITLPLQSMFPKENLDMGLAIPSCLLP-SLPSLSCLRKLDISYCS-LSQIPDAIGCLLW 801

Query: 617 LSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           L  L L G +   +PS  E L+KL  LNL +C  L   P
Sbjct: 802 LERLNLGGNNFVTLPSFRE-LSKLAYLNLENCMQLKYFP 839



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 150/523 (28%), Positives = 238/523 (45%), Gaps = 62/523 (11%)

Query: 516  ISGLKCLSTLD-VSGDLKF---REFPEIV----EHMEHLSELHLEGTAIRGLPLSIELLS 567
            + G+    +LD +S +L++   RE+P +          L EL LE ++I+ L    + L 
Sbjct: 573  LDGMDFSGSLDCISNELRYVEWREYPFMYLPSSFQPYQLVELILEDSSIKQLWEGTKYLP 632

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSI 627
             L  L L+N +SL  +P     +  L  L L GC KL+                      
Sbjct: 633  NLRTLELRNSKSLIKVP-DFGEIPNLERLNLKGCVKLE---------------------- 669

Query: 628  KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
             ++  SI +L KL  LNL DCKNLV +P+ +  L SL+ LNLSGC+K  N    L     
Sbjct: 670  -QIDPSISVLRKLVYLNLEDCKNLVTIPNDLFGLTSLEYLNLSGCYKAFNTSLHLKNYID 728

Query: 688  LEELDISGTAVPHSTSWY-----SYIPINLMRKSVALK---LPSLSGLCSLRKLNLTDCN 739
              E      +      W      S  P   +   +A+    LPSL  L  LRKL+++ C+
Sbjct: 729  SSESASHSQSKFSIFDWITLPLQSMFPKENLDMGLAIPSCLLPSLPSLSCLRKLDISYCS 788

Query: 740  LMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP-PN 798
            L +  +P  IG L  L+ L L  N+FV+LP S   LSKL  + LE+C +L+  P+LP  +
Sbjct: 789  LSQ--IPDAIGCLLWLERLNLGGNNFVTLP-SFRELSKLAYLNLENCMQLKYFPELPSAS 845

Query: 799  IRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEA-----V 853
              +   +   S  +      LC     +  C +  ++     LAFS + ++L+A      
Sbjct: 846  SIEHEHSHMFSDTSYWRRAGLC-----IFNCPELGEMEKCSDLAFSWMIQFLQANQLESS 900

Query: 854  SNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRG 913
            S   + +++V+PG+E+P WF  QN  SSI++     +++   ++ +A C VF        
Sbjct: 901  SVFFREINIVIPGTEMPRWFNNQNMESSISIDISPIMHHDSDVIAFACCVVFSAAPYP-S 959

Query: 914  NNCFGSYPTHQLNCHIGHG----IYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLES 969
             N   +Y    ++     G      GI          S+H+WL Y +R++  D+   ++S
Sbjct: 960  TNMKTNYRKPVIHLCFSSGDLEVFLGIPAHTNLNMLKSNHIWLAYFTRESFIDLMSDIDS 1019

Query: 970  NLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEELDQT 1012
             L       + V  E   G  +EVK CG   VY  +++ L+ T
Sbjct: 1020 TLGDIRMEVLIVDGE---GLDVEVKNCGYRWVYKHDLQHLNFT 1059


>gi|357469133|ref|XP_003604851.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355505906|gb|AES87048.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1890

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 237/567 (41%), Positives = 343/567 (60%), Gaps = 39/567 (6%)

Query: 1    MDSRCEKLRFLMD-SGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            ++SR E    L++   + DV ++GI GMGG GKTTIA+ +Y+ I  EFE   FL N+RE 
Sbjct: 1045 LESRVEAATKLLNIKNTKDVLILGIWGMGGTGKTTIAKAIYNQIGSEFEGRSFLLNIREF 1104

Query: 60   -SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
              +    VSLQ+++L  + K     I ++  G ++L  RL +KKVL V+DDV ++ QL++
Sbjct: 1105 WETDTNQVSLQQKVLCDVYKTTKFKIRDIESGKNILRQRLSQKKVLFVLDDVNELDQLKA 1164

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            L G+REWFG GSRIIIT+RD HLLK+  VDEV     ++  E+L+LF+  AFK   P ++
Sbjct: 1165 LFGSREWFGPGSRIIITTRDLHLLKSCRVDEVCAIQDMDESESLELFSWHAFKQPTPTED 1224

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
                S  ++ Y+GG                  +W+  LE+L   P +E+   L++SFDGL
Sbjct: 1225 FATHSKDVVSYSGGFAT---------------KWQKVLEKLRCIPDAEVQKKLKVSFDGL 1269

Query: 239  QEL-EKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHD 296
            +++ EK IFLDIACFF G DR+ V   L GCGF   IGI+VL+E+ L+ + N N L MHD
Sbjct: 1270 KDVTEKHIFLDIACFFIGMDRNDVIQILNGCGFFADIGIKVLVERSLLIIDNRNKLRMHD 1329

Query: 297  LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
            LL+++G+QI+  +SP +  KR RLW+ EEV  +L+++ GTE V+G+ L+ +  +N V L 
Sbjct: 1330 LLRDMGRQIIYEESPSDPEKRGRLWRREEVFDILSKNKGTEAVKGLALE-FPRKNTVSL- 1387

Query: 357  ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
             + KAF KM  LRLL++  +QL    +YLS  LR L W  +PL + P+  Q    I I +
Sbjct: 1388 -NTKAFKKMNKLRLLQLSGVQLNGDFKYLSGELRWLSWHRFPLAYTPAEFQQGSLIAITL 1446

Query: 417  CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             YS + ++WK  + L+ LK++ LSHS+NLI  PDFT  PN+EKL+L+ C  L  +  S+ 
Sbjct: 1447 KYSNLKQIWKKSQMLENLKILNLSHSQNLIETPDFTYLPNIEKLVLKDCPSLSTVSHSIG 1506

Query: 477  LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
               KL+++N+ DCT                  L++LP +I  LK L TL +SG  K  + 
Sbjct: 1507 SLCKLLMINLTDCT-----------------GLQNLPRSIYKLKSLETLILSGCSKIDKL 1549

Query: 537  PEIVEHMEHLSELHLEGTAIRGLPLSI 563
             E VE ME L+ L  + TAI  +P SI
Sbjct: 1550 EEDVEQMESLTTLIADKTAITKVPFSI 1576



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 159/294 (54%), Gaps = 27/294 (9%)

Query: 21  MIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI-SSKGGLVSLQRQLLSQLLKL 79
           ++G+ GM G+ K+TIA+ +++ I   FE    +DNV E      G VSLQ +LL  +   
Sbjct: 586 LLGMWGMSGISKSTIAQAIFNQIGPYFEHKCNIDNVGEAWEQDNGQVSLQDELLCFIGGA 645

Query: 80  ADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDE 139
            +  I +V  G  +L  RLQ K+VLL++ +V  ++QL++L G+R+WFG G +IIIT+ + 
Sbjct: 646 TEIKIPSVESGRIILKERLQHKRVLLLLYNVDKLEQLKALCGSRDWFGPGRKIIITTSNR 705

Query: 140 HLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEV 199
           HLLK HGVD +++                       ++E      +I+ Y GGLP AL+ 
Sbjct: 706 HLLKEHGVDHIHR-----------------------VKELDNKFGKIVSYCGGLPFALKE 742

Query: 200 LGSFLSGRSVDEWRSTLERLE--IEPPSEILDILQISFDGLQELEKKIFLDIACFFKGND 257
           LG  L    + +W++ L R+E    P   +L+ L+ S   L   EK+IF DIACFF G  
Sbjct: 743 LGMSLYLSEMLDWKTVLRRIERFSIPKGSLLEALEKSLSDLYVEEKQIFFDIACFFIGMS 802

Query: 258 RDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELGQQIVQRQS 310
           ++ V   L        + I  L +K  +T+  NN L MH LLQ + + I+ R+S
Sbjct: 803 QNDVLQTLNRSIQRATLQINCLEDKSFVTIDENNKLQMHVLLQAMARDIINRES 856



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 89/148 (60%), Gaps = 1/148 (0%)

Query: 21  MIGICGMGGLGKTTIARVVYDLISHEFEAS-GFLDNVREISSKGGLVSLQRQLLSQLLKL 79
           ++GI GM G+GK+TIA  +Y+ I   F+      D +R      G VSLQ +LL  +   
Sbjct: 230 LLGIWGMTGIGKSTIAEAIYNQIGPFFKHKYNIPDVMRSWEQDNGQVSLQDKLLCFICGE 289

Query: 80  ADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDE 139
            +  I  V  G  +L  RLQ K+VLL++D+V  ++QL++L GNR+WFG GS+IIIT+ + 
Sbjct: 290 TEIKIRTVESGRVILKERLQHKRVLLLLDNVDKLEQLKALCGNRDWFGPGSKIIITTSNR 349

Query: 140 HLLKTHGVDEVYKPHGLNYDEALQLFNM 167
            LL  HGVD ++    L  +   +++++
Sbjct: 350 QLLTQHGVDHIHSAFKLATNPKRKIYDV 377



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 10/139 (7%)

Query: 590  LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDC 648
            L+ L+ L LS    L + P+    + ++ +L L D  S+  V  SI  L KL ++NL+DC
Sbjct: 1461 LENLKILNLSHSQNLIETPDFTY-LPNIEKLVLKDCPSLSTVSHSIGSLCKLLMINLTDC 1519

Query: 649  KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI 708
              L  LP SI  LKSL+TL LSGC K++ + E + Q+ESL  L    TA+       + +
Sbjct: 1520 TGLQNLPRSIYKLKSLETLILSGCSKIDKLEEDVEQMESLTTLIADKTAI-------TKV 1572

Query: 709  PINLMRKSVALKLPSLSGL 727
            P +++R S ++   SL G 
Sbjct: 1573 PFSIVR-SKSIGYISLGGF 1590



 Score = 40.8 bits (94), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 3/101 (2%)

Query: 595  SLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRL 654
            +LK S   ++ K  +++ ++K L+       ++ E P     L  +E L L DC +L  +
Sbjct: 1445 TLKYSNLKQIWKKSQMLENLKILN--LSHSQNLIETPD-FTYLPNIEKLVLKDCPSLSTV 1501

Query: 655  PSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
              SI +L  L  +NL+ C  L+N+P ++ +++SLE L +SG
Sbjct: 1502 SHSIGSLCKLLMINLTDCTGLQNLPRSIYKLKSLETLILSG 1542


>gi|356545122|ref|XP_003540994.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1045

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 294/814 (36%), Positives = 447/814 (54%), Gaps = 70/814 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           MDSR ++L  L+D  ++DV R++GI GM G+GKTT+   ++  IS +++A  F+D++ + 
Sbjct: 190 MDSRVKQLEELLDLSANDVVRVVGIWGMSGVGKTTLVTALFGKISPQYDARCFIDDLNKY 249

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
               G  S Q+QLL Q L   +  I N+  G  ++ +RL+R K L+V+D+V  V+QL++L
Sbjct: 250 CGDFGATSAQKQLLCQALNQGNMEIHNLSHGTMLVRTRLRRLKTLIVLDNVDQVEQLENL 309

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           A + E+ G GSRIII S++ H+LK +GV +VY    L  D+ALQL   KAFK+    +  
Sbjct: 310 ALHPEYLGEGSRIIIISKNMHILKNYGVYKVYNVQLLKKDKALQLLCKKAFKSDDIEKGY 369

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            +++  +++Y  GLPLA++VLGSFL  R V EWRS L R++  P  +I+D+L+ISFDGL+
Sbjct: 370 EEVTYDVLKYVNGLPLAIKVLGSFLFDRDVFEWRSALTRMKENPSKDIMDVLRISFDGLE 429

Query: 240 ELEKKIFLDIACFF-KGNDRDY------VTNFLEGCGFHPVIGIRVLIEKCLITVHN-NT 291
            +EK+IFLDI CFF  G  +DY          L   GF+P IG++VL+EK LI+    + 
Sbjct: 430 TMEKEIFLDIVCFFLSGQFQDYDRRSIPPEKILGYRGFYPKIGMKVLVEKSLISFDRYSN 489

Query: 292 LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
           + MHDLL+ELG+ IV+ ++P++  K SRLW  +++  V+ E+   + +E I + N  +++
Sbjct: 490 IQMHDLLKELGKIIVREKAPKQPRKWSRLWDYKDLQKVMIENKEAKNLEAICICNEKYQD 549

Query: 352 EVYLCASAK--AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMD 409
           E +L  + K  A SKM +L+LL + N+     L YLSN LR L W  YP   +PS+   D
Sbjct: 550 E-FLQQTMKVDALSKMIHLKLLMLKNVNFSGILNYLSNELRYLYWDNYPFLSMPSSFHPD 608

Query: 410 KTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLY 469
           + +E+ + YS I +LWK  KHL  LK + LSHS+NLI MPD +G P+L  L L+GCT++ 
Sbjct: 609 QLVELILPYSNIKQLWKDTKHLPNLKDLDLSHSQNLIEMPDLSGVPHLRNLNLQGCTKIV 668

Query: 470 EIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG 529
            I PS+    +L  LN+++C +L              LNL      I GL  L+ L++SG
Sbjct: 669 RIDPSIGTLRELDSLNLRNCINLF-------------LNL----NIIFGLSSLTVLNLSG 711

Query: 530 DLK-----FREFPEIVEHMEHLSE----LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL 580
             K       + P   EHME + E    + L  +++      + +L   +  + K   SL
Sbjct: 712 CSKLLTNRLLQKPRETEHMEKIDENRSSIQLSTSSV----YEMLMLPFYIFSSWKQVDSL 767

Query: 581 EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
            +L   +S    L  L LS C+ L + P+ + ++  L  L L G     +P++I+ L++L
Sbjct: 768 GLLVPYLSRFPRLFVLDLSFCN-LLQIPDAIGNLHSLVILNLGGNKFVILPNTIKQLSEL 826

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIE------------SL 688
             LNL  CK L  LP  +   K  K     G     N P  L ++E            S 
Sbjct: 827 RSLNLEHCKQLKYLP-ELPTPKKRKNHKYYGGLNTFNCP-NLSEMELIYRMVHWQSSLSF 884

Query: 689 EELD--ISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGL--CSLRKLNLTDCNLMEGA 744
             LD  I GT +P   S  +      M  S  ++ P+  G+  C+L         L+   
Sbjct: 885 NRLDIVIPGTEIPRWFSKQNEGDSISMDPSPLMEDPNWIGVACCAL---------LVAHH 935

Query: 745 LPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
            PS+IG L  L  L+ S+  F+  P   T +  L
Sbjct: 936 DPSNIGELDHLLILFASREEFLLFPRHETDMHGL 969



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 124/383 (32%), Positives = 183/383 (47%), Gaps = 59/383 (15%)

Query: 542 HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
           H + L EL L  + I+ L    + L  L  L+L + ++L  +P  +S +  LR+L L GC
Sbjct: 606 HPDQLVELILPYSNIKQLWKDTKHLPNLKDLDLSHSQNLIEMP-DLSGVPHLRNLNLQGC 664

Query: 602 SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
           +K      IVR                 +  SI  L +L+ LNL +C NL    + I  L
Sbjct: 665 TK------IVR-----------------IDPSIGTLRELDSLNLRNCINLFLNLNIIFGL 701

Query: 662 KSLKTLNLSGCFKL--ENVPETLGQIESLEELDISGTAVPHSTSWYS---YIPINLMRK- 715
            SL  LNLSGC KL    + +   + E +E++D + +++  STS       +P  +    
Sbjct: 702 SSLTVLNLSGCSKLLTNRLLQKPRETEHMEKIDENRSSIQLSTSSVYEMLMLPFYIFSSW 761

Query: 716 ----SVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTS 771
               S+ L +P LS    L  L+L+ CNL++  +P  IGNL SL  L L  N FV LP +
Sbjct: 762 KQVDSLGLLVPYLSRFPRLFVLDLSFCNLLQ--IPDAIGNLHSLVILNLGGNKFVILPNT 819

Query: 772 ITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLD 831
           I  LS+L ++ LE CK+L+ LP+LP   ++        L T       C + S M     
Sbjct: 820 IKQLSELRSLNLEHCKQLKYLPELPTPKKRKNHKYYGGLNTF-----NCPNLSEM----- 869

Query: 832 SLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLY 891
                    L + M+  +  ++S  R  L +V+PG+EIP WF  QNEG SI++  PS L 
Sbjct: 870 --------ELIYRMV-HWQSSLSFNR--LDIVIPGTEIPRWFSKQNEGDSISMD-PSPLM 917

Query: 892 NKKKLVGYAICCVFHVLKNSRGN 914
                +G A CC   V  +   N
Sbjct: 918 EDPNWIGVA-CCALLVAHHDPSN 939


>gi|449447743|ref|XP_004141627.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1127

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 317/966 (32%), Positives = 490/966 (50%), Gaps = 140/966 (14%)

Query: 19   VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE--ISSKGGLVSLQRQLLSQL 76
            V  +GI GMGG+GKTTIARV Y+ I  EFEA  FL NVRE  I + G L  LQ +LLS +
Sbjct: 247  VIFVGIHGMGGIGKTTIARVCYERIRDEFEAHCFLSNVRENYIRTLGNLSCLQTKLLSSM 306

Query: 77   LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITS 136
              L +N I +V +G  M+   + RKK LLV+DDV    Q++ L  +   FG+GSR+IIT+
Sbjct: 307  FSLKNNHIMDVEEGTAMINKAIFRKKTLLVLDDVDSSDQIKGLIPDNNSFGNGSRVIITT 366

Query: 137  RDEHLLKTH-GVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPL 195
            R+   L    GV  +++   L Y+EALQL ++ AF    P +  ++ S +I++  GG PL
Sbjct: 367  RNADFLSNEFGVKRIFEMDELKYEEALQLLSLSAFMKTCPKEGYLEHSKKIVKVVGGHPL 426

Query: 196  ALEVLGSFLSGRSVDEWRSTLERLEI--EPPSEILDILQISFDGLQELEKKIFLDIACFF 253
            AL++LGS L  +++  W   +E +        +I   L++S+DGL E E++IFLD+ACFF
Sbjct: 427  ALKLLGSSLRNKNLSVWNEVIEEVGGGGNIHEKIFKCLKVSYDGLDEREREIFLDVACFF 486

Query: 254  KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELGQQIVQRQSPE 312
             G  R+ V   L GCGF+    I +LI+K L+T+ ++N L MH+LLQE+G++IV+ +   
Sbjct: 487  NGKRREVVEEILNGCGFYAKTRIELLIQKSLLTLSYDNKLHMHNLLQEMGRKIVRDKHV- 545

Query: 313  ELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLK 372
                R RL   +++  V+TE+    L++ I    +   +   +      FS+M  LRLL 
Sbjct: 546  ----RDRLMCHKDIKSVVTEA----LIQSI----FFKSSSKNMVEFPILFSRMHQLRLLN 593

Query: 373  ICNLQLPNGLEY-LSNRLRLLGWRGYPLKFLPSNLQMD-KTIEIYMCYSRIGELWKGIKH 430
              N++L N LEY + + LR L W+GYPL+FLP +   + K IE++MC+S + + W+  K+
Sbjct: 594  FRNVRLKNKLEYSIPSELRYLKWKGYPLEFLPIDSSEECKLIELHMCHSNLKQFWQQEKN 653

Query: 431  LDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCT 490
            L +LK + L+ S+ L + P+F   PNL++L LE CT L  IHPS+    KLI L++KDC 
Sbjct: 654  LVELKYIKLNSSQKLSKTPNFANIPNLKRLELEDCTSLVNIHPSIFTAEKLIFLSLKDCI 713

Query: 491  SLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELH 550
            +L  LP  I +K LE                   L +SG  K ++ PE   +   L +LH
Sbjct: 714  NLTNLPSHINIKVLE------------------VLILSGCSKVKKVPEFSGNTNRLLQLH 755

Query: 551  LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSN---LKCLRSLKLSGCSKLKKF 607
            L+GT+I  LP SI  LS L +L+L NC+ L    + +SN   +  L+SL +SGCSKL   
Sbjct: 756  LDGTSISNLPSSIASLSHLTILSLANCKML----IDISNAIEMTSLQSLDVSGCSKLGSR 811

Query: 608  PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD--CKNLVRLPSSIIALKSLK 665
                 ++ +L E+ +  T+ +        + K   L L +     +  +P S+  L SL 
Sbjct: 812  KGKGDNV-ELGEVNVRETTRRRRNDDCNNIFKEIFLWLCNTPATGIFGIP-SLAGLYSLT 869

Query: 666  TLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLS 725
             LNL  C  LE +P+ +  + SL ELD+SG         +S++P             S+S
Sbjct: 870  KLNLKDC-NLEVIPQGIECMVSLVELDLSGNN-------FSHLP------------TSIS 909

Query: 726  GLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELED 785
             L +L++L +  C                                 + H  KL       
Sbjct: 910  RLHNLKRLRINQCK-------------------------------KLVHFPKL------- 931

Query: 786  CKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIA----CLDSLKLLGNKSL 841
                      PP I  +    C SL   +D   + K D+  I      L+  ++  NK  
Sbjct: 932  ----------PPRILFLTSKDCISLKDFID---ISKVDNLYIMKEVNLLNCYQMANNKDF 978

Query: 842  AFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAI 901
               ++   ++ +   +   ++++PGSEIP+WF  +  GSS+ +    +  N   ++ +A+
Sbjct: 979  H-RLIISSMQKMFFRKGTFNIMIPGSEIPDWFTTRKMGSSVCMEWDPDAPN-TNMIRFAL 1036

Query: 902  CCVFHVLKNSRGNNCFGSYPT----------HQLNCHIGHGIYGIGFRDKFGQAGSDHLW 951
            C V  +  + + + C  S  T          +  N   G  +   GF    G    DH+W
Sbjct: 1037 CVVIGL--SDKSDVCNVSSFTIIASVTGKDRNDTNLKNGDDLLVDGFLVS-GMKKLDHIW 1093

Query: 952  LLYLSR 957
            +  L R
Sbjct: 1094 MFVLPR 1099


>gi|224121242|ref|XP_002318534.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222859207|gb|EEE96754.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1360

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 337/1024 (32%), Positives = 503/1024 (49%), Gaps = 152/1024 (14%)

Query: 1    MDSRCEKLRF-LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            +DSR EKL+    D  S+ V+++G+ GMGG+GKTT+A  +++ +   FE+  F+ N+++I
Sbjct: 190  LDSRLEKLKMRFTDDKSNRVQVLGLYGMGGIGKTTLATALFNKLVGHFESRCFISNIKDI 249

Query: 60   SSK-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            S + GGLV+LQ +LL  L       + ++ DGI ++      K+VL+V+DDV DV QL  
Sbjct: 250  SQEDGGLVTLQNKLLGDLFP-DRPPVNDINDGIAVIKELCHEKRVLVVLDDVDDVNQLNV 308

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            LAG R+WFG GSR+I+T+R+  +L  H V+E Y+   L   EAL+LF+  A +   P +E
Sbjct: 309  LAGKRDWFGEGSRVIVTTRNRDVLVEHLVNEFYEVRELGSSEALKLFSYHALRRDNPTEE 368

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFL-SGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
             + +S  I+   GGLPLALEV GS L + R + +W   L++L    P  + D+L+ISFDG
Sbjct: 369  YLNISKEIVSLTGGLPLALEVFGSTLFNERGIKKWEDVLKKLREIRPGNLQDVLRISFDG 428

Query: 238  LQELEKKIFLDIACFF--KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWM 294
            L + EK +FLDIAC F      R+   + L GCGF     I VL  KCLI +  +  LWM
Sbjct: 429  LDDEEKCVFLDIACLFIKMRMKREEAIDILNGCGFRAETAITVLTVKCLIKIGGDYELWM 488

Query: 295  HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD----NYHHE 350
            HD L+++G+QIV+ ++  + G RSRLW   ++  +L    GT  V+G++LD    NY   
Sbjct: 489  HDQLRDMGRQIVRDENLLDPGMRSRLWDRGDIMTMLKHKKGTRHVQGLILDFEKKNYVRT 548

Query: 351  NEV-------------YLCASAKAF-----------------SKMTNLRLLKICNLQLPN 380
             ++             YL    K F                   + NLRLL+I + ++  
Sbjct: 549  QKISWVKALNPSSSLDYLIEKCKLFLQLRAEEGELILDTEALKSLVNLRLLQINHAKVKG 608

Query: 381  GLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKH--LDKLKVMI 438
              +     L+ L W+  PLK LPS+    +   + +  S I  +W   ++   + L VM 
Sbjct: 609  KFKSFPASLKWLQWKNCPLKKLPSDYAPHELAVLDLSESGIQRVWGWTRNKVAENLMVMN 668

Query: 439  LSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGK 498
            L    NL   PD +G   LEKL  +GC +L +IH SL     L+ LN+  C +L+  P  
Sbjct: 669  LRRCYNLEASPDLSGCKKLEKLDFKGCIQLTKIHESLGNVRTLLQLNLDKCINLVEFPRD 728

Query: 499  I----LMKSL---EKLNLKSLPTTISGLKCLSTLDVS----------------------G 529
            +    L+++L     L L+ LP  I  +  L  L V                        
Sbjct: 729  VSGLRLLQNLILSSCLKLEELPQDIGSMNSLKELVVDETAISMLPQSLYRLTKLEKLSLN 788

Query: 530  DLKF-REFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS 588
            D KF +  PE + ++  L EL L  +A+  LP SI  LS L  L+L  C+SL  +P ++ 
Sbjct: 789  DCKFIKRLPERLGNLISLKELSLNHSAVEELPDSIGSLSNLEKLSLMRCQSLTTIPESIR 848

Query: 589  NLKC-----------------------LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT 625
            NL+                        L++L   GC  L K P+ +  +  +SEL LDGT
Sbjct: 849  NLQSLMEVSITSSAIKELPAAIGSLPYLKTLFAGGCHFLSKLPDSIGGLASISELELDGT 908

Query: 626  SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI 685
            SI E+P  I  L  +E L L  C +L  LP +I  + +L T+NL GC  +  +PE+ G++
Sbjct: 909  SISELPEQIRGLKMIEKLYLRKCTSLRELPEAIGNILNLTTINLFGC-NITELPESFGRL 967

Query: 686  ESLEELDISGT----AVPHSTSWYSYIPINLMRKSVALKLP------------------- 722
            E+L  L++        +P S      +   LM K+    LP                   
Sbjct: 968  ENLVMLNLDECKRLHKLPVSIGNLKSLCHLLMEKTAVTVLPENFGNLSSLMILKMQKDPL 1027

Query: 723  --------------SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSL 768
                          S S L  L +LN     +  G LP D   L SL  L L  N+F SL
Sbjct: 1028 EYLRTQEQLVVLPNSFSKLSLLEELNARAWRI-SGKLPDDFEKLSSLDILDLGHNNFSSL 1086

Query: 769  PTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKL--------- 819
            P+S+  LS L  + L  C+ L+SLP LPP++ ++ V+ C  L T+ D   L         
Sbjct: 1087 PSSLCGLSLLRKLLLPHCEELKSLPPLPPSLEELDVSNCFGLETISDVSGLERLTLLNIT 1146

Query: 820  -CKS--DSTMIACLDSLKLL---GNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWF 873
             C+   D   I CL  LK L     K+ + ++ R   +      ++LS  +PGS+ P+WF
Sbjct: 1147 NCEKVVDIPGIGCLKFLKRLYMSSCKACSLTVKRRLSKVCLRNIRNLS--MPGSKFPDWF 1204

Query: 874  MYQN 877
              +N
Sbjct: 1205 SQEN 1208


>gi|82542039|gb|ABB82027.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1120

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 272/718 (37%), Positives = 412/718 (57%), Gaps = 44/718 (6%)

Query: 11  LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK-GGLVSLQ 69
            + + + DVR++GI GM G+GKTTIA+VV++ + + F+ S FL ++ E S +  GL  LQ
Sbjct: 205 FLSNATDDVRIVGIHGMPGIGKTTIAKVVFNQLCNGFDGSCFLSDINERSKQVNGLALLQ 264

Query: 70  RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG 129
           ++LL  +LK    +   V  G  ++  RL RK+VL+V DDV    QL++L G+R WFG G
Sbjct: 265 KRLLHDILKQDAANFDCVDRGKVLIKERLCRKRVLVVADDVAHQDQLKALMGDRSWFGPG 324

Query: 130 SRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRY 189
           SR+IIT+R+ +LL+    D  Y+   L  D++LQLF+  AF+  +P ++ ++LS + + Y
Sbjct: 325 SRVIITTRNSNLLRK--ADRTYQIEELTRDQSLQLFSWHAFEDTKPAEDYIELSKKAVDY 382

Query: 190 AGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELE-KKIFLD 248
            GGLPLAL+V+G+ LSG++ D W+S +++L+  P  +I   L+IS+D L   E K  FLD
Sbjct: 383 CGGLPLALDVMGACLSGKNRDGWKSVIDKLKRIPNHDIQRKLRISYDLLDGEELKNAFLD 442

Query: 249 IACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQ 307
           IACFF    ++Y+   L   CG++P + ++ L E+ LI V   T+ MHDLL+++G+++V+
Sbjct: 443 IACFFIDRKKEYIAKLLGARCGYNPEVDLQTLHERSLIKVLGETVTMHDLLRDMGREVVR 502

Query: 308 RQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTN 367
              P+E GKR+R+W +E+  +VL +  GTE+VEG+ LD    E +     S  +F+KM  
Sbjct: 503 ESPPKEPGKRTRIWNQEDAWNVLQQQKGTEVVEGLKLDVRASETK---SLSTGSFAKMKG 559

Query: 368 LRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKG 427
           L LL+I    L    + LS  L  + W  +PLK+ PS+  +D    + M YS + ELWKG
Sbjct: 560 LNLLQINGAHLTGSFKLLSKELMWICWHEFPLKYFPSDFTLDNLAVLDMQYSNLKELWKG 619

Query: 428 IKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMK 487
            K LDKLK++ LSHS++LI+ PD   + +LEKLILEGC+ L E+H S+     L+ LN+K
Sbjct: 620 KKILDKLKILNLSHSQHLIKTPDLHSS-SLEKLILEGCSSLVEVHQSIENLTSLVFLNLK 678

Query: 488 DCTSLITLPGKIL-MKSLEKLNL------KSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
            C SL TLP  I  +KSLE LN+      + LP  +  ++ L+ L   G ++  +F   +
Sbjct: 679 GCWSLKTLPESIDNVKSLETLNISGCSQVEKLPERMGDMEFLTELLADG-IENEQFLSSI 737

Query: 541 EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
             ++H   L L G +    P S  L+S  V LN K       LP +      ++ L+LS 
Sbjct: 738 GQLKHCRRLSLCGDS--STPPSSSLISTGV-LNWKRW-----LPASFIEWISVKHLELSN 789

Query: 601 CSKLKKFPEIV--RSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSI 658
                +    V    +  L +L LDG     +PS I  L++L  L++  CK LV +P   
Sbjct: 790 SGLSDRATNCVDFSGLSALEKLTLDGNKFSSLPSGIGFLSELRELSVKGCKYLVSIPD-- 847

Query: 659 IALKSLKTLNLSGCFKLENV-----PET-----LGQIESLEEL-DISGTAVPHSTSWY 705
               SLK L    C  L+ V     P+      L +  SLEE  DI G +   ++ WY
Sbjct: 848 -LPSSLKRLGACDCKSLKRVRIPSEPKKELYIFLDESHSLEEFQDIEGLS---NSFWY 901



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 168/361 (46%), Gaps = 58/361 (16%)

Query: 579 SLEILPVTVSNLK----------CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSI 627
           +L +L +  SNLK           L+ L LS    L K P++  S   L +L L+G +S+
Sbjct: 602 NLAVLDMQYSNLKELWKGKKILDKLKILNLSHSQHLIKTPDLHSS--SLEKLILEGCSSL 659

Query: 628 KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
            EV  SIE LT L  LNL  C +L  LP SI  +KSL+TLN+SGC ++E +PE +G +E 
Sbjct: 660 VEVHQSIENLTSLVFLNLKGCWSLKTLPESIDNVKSLETLNISGCSQVEKLPERMGDMEF 719

Query: 688 LEELDISG------------------------TAVPHSTSWYSYIPINLMRKSVALKLPS 723
           L EL   G                        ++ P S+S  S   +N  R   A    S
Sbjct: 720 LTELLADGIENEQFLSSIGQLKHCRRLSLCGDSSTPPSSSLISTGVLNWKRWLPA----S 775

Query: 724 LSGLCSLRKLNLTDCNLMEGALPS-DIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIE 782
                S++ L L++  L + A    D   L +L++L L  N F SLP+ I  LS+L  + 
Sbjct: 776 FIEWISVKHLELSNSGLSDRATNCVDFSGLSALEKLTLDGNKFSSLPSGIGFLSELRELS 835

Query: 783 LEDCKRLQSLPQLPPNIRQVRVNGCASLVTLL------DALKLCKSDSTMIACLDSLKLL 836
           ++ CK L S+P LP +++++    C SL  +         L +   +S  +     ++ L
Sbjct: 836 VKGCKYLVSIPDLPSSLKRLGACDCKSLKRVRIPSEPKKELYIFLDESHSLEEFQDIEGL 895

Query: 837 GN---------KSLAFSML-REYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTR 886
            N         +S + S L +  +EA+ N R    +     ++P W  Y+ EG S++   
Sbjct: 896 SNSFWYIRVDDRSHSPSKLQKSVVEAMCNGRHGYFIRHTPGQMPNWMSYRGEGRSLSFHI 955

Query: 887 P 887
           P
Sbjct: 956 P 956


>gi|357513207|ref|XP_003626892.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355520914|gb|AET01368.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 908

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 241/566 (42%), Positives = 343/566 (60%), Gaps = 23/566 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++SR E+    +   S  V ++GI GMGG+GK+TIA+V+Y+ + +EFE   FL N+RE+ 
Sbjct: 210 LESRAEQSIRYLRHNSDGVCLVGIWGMGGIGKSTIAKVIYNNLCYEFEDQSFLANIREVW 269

Query: 61  SKG-GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            K  G + LQ QLLS +LK     + +V  G  M+  RL  K+ L+V+DDV +  Q  SL
Sbjct: 270 EKDRGRIDLQEQLLSDILKTRKIKVHSVEFGKAMIKERLVTKRALVVLDDVSEFDQFNSL 329

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            GNR   G GS IIIT+RD  LL   GVD +Y+  GLN  E+L+LF+  AF+   P++  
Sbjct: 330 CGNRNGIGPGSIIIITTRDVRLLDILGVDFIYEAEGLNSVESLELFSQHAFRETSPIEGF 389

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           + LS  ++ Y GGLPLALEVLGS+L  R   EW+S L +LE  P  +I + L+ISFDGL+
Sbjct: 390 LILSRYVVAYCGGLPLALEVLGSYLFKRRKQEWQSVLSKLEKIPNDQIHEKLKISFDGLR 449

Query: 240 E-LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDL 297
           + +EK IFLD+ CFF G DR YVTN L GCG H  IGI VLIE+ LI +   N L MHDL
Sbjct: 450 DHMEKDIFLDVCCFFIGKDRAYVTNILNGCGLHADIGITVLIERSLIKIEKYNKLGMHDL 509

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           L+++G++IV+  SPEE  KRSRLW  E+V  VLT+ TGT+ +EG+V+     +    +  
Sbjct: 510 LRDMGREIVRESSPEEPEKRSRLWYHEDVVDVLTDHTGTKAIEGLVM---KLQRSSRVGF 566

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
            A  F KM  LRLL++ ++Q+    E  S  L  L W+G+PLK++P N      + + + 
Sbjct: 567 DAIGFEKMKRLRLLQLDHVQVIGDYECFSKHLSWLSWQGFPLKYMPENFYQKNLVAMDLK 626

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
           +S + ++WK  + L+ LK++ LSHS  L   PDF+  PNLE LI++ C  L+E+H S+  
Sbjct: 627 HSNLTQVWKRPQMLEGLKILNLSHSMYLTSTPDFSKLPNLENLIMKDCQSLFEVHSSIGD 686

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
             KL+++N KDCTS                 L++LP  I  L  + T  +SG  K  +  
Sbjct: 687 LKKLLLINFKDCTS-----------------LRNLPREIYQLTSVKTFILSGCSKIEKLE 729

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSI 563
           E +  M+ L+ L    T ++ +P SI
Sbjct: 730 EDIVQMKSLTTLIAAKTGVKQVPFSI 755



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 80/163 (49%), Gaps = 14/163 (8%)

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEIL--PVTVSNLKCL---RSLKL 598
           +HLS L  +G  ++ +P +      LV ++LK+    ++   P  +  LK L    S+ L
Sbjct: 596 KHLSWLSWQGFPLKYMPENF-YQKNLVAMDLKHSNLTQVWKRPQMLEGLKILNLSHSMYL 654

Query: 599 SGCSKLKKFPEIVR-SMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSS 657
           +      K P +    MKD   LF       EV SSI  L KL L+N  DC +L  LP  
Sbjct: 655 TSTPDFSKLPNLENLIMKDCQSLF-------EVHSSIGDLKKLLLINFKDCTSLRNLPRE 707

Query: 658 IIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
           I  L S+KT  LSGC K+E + E + Q++SL  L  + T V  
Sbjct: 708 IYQLTSVKTFILSGCSKIEKLEEDIVQMKSLTTLIAAKTGVKQ 750



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 33/216 (15%)

Query: 495 LPGKILMKSLEKLNLK--------SLPTTISGLKCLS---TLDVSGDLKFREFPE----I 539
           +P     K+L  ++LK          P  + GLK L+   ++ ++    F + P     I
Sbjct: 611 MPENFYQKNLVAMDLKHSNLTQVWKRPQMLEGLKILNLSHSMYLTSTPDFSKLPNLENLI 670

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
           ++  + L E+H           SI  L  L+L+N K+C SL  LP  +  L  +++  LS
Sbjct: 671 MKDCQSLFEVHS----------SIGDLKKLLLINFKDCTSLRNLPREIYQLTSVKTFILS 720

Query: 600 GCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVR--LPSS 657
           GCSK++K  E +  MK L+ L    T +K+VP SI     +  ++L + + L R   PS 
Sbjct: 721 GCSKIEKLEEDIVQMKSLTTLIAAKTGVKQVPFSIVKSKNIGYISLCEYEGLSRDVFPSI 780

Query: 658 IIALKSLKTLNLSGCFKLENVPETLGQIESLEELDI 693
           I +  S   +N      L ++P   G   SL  LD+
Sbjct: 781 IWSWMS-PNMN-----SLAHIPPVGGMSMSLVCLDV 810


>gi|357469143|ref|XP_003604856.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355505911|gb|AES87053.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 2019

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 255/667 (38%), Positives = 384/667 (57%), Gaps = 54/667 (8%)

Query: 16   SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKG-GLVSLQRQLLS 74
            S DV ++GI GMG   KTTIA+ +Y+ I  +F+   FL N+RE    G   VSLQ+Q+L 
Sbjct: 675  SEDVLLLGIWGMG---KTTIAKSIYNEIGSKFDGKSFLLNIREFWETGTNQVSLQQQVLC 731

Query: 75   QLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIII 134
             + K     I ++  G + L  RL   +VLLV+DDV ++ Q+++L G+R+WFG GSRIII
Sbjct: 732  DVYKTTSFKIRDIESGKNTLKERLSDNRVLLVLDDVNELDQIKALCGSRKWFGPGSRIII 791

Query: 135  TSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLP 194
            T+RD  LL++  VD+VY+   ++  E+L+LF+  AFK   P+++       ++ Y+G  P
Sbjct: 792  TTRDMRLLRSCRVDQVYEIKEMDEIESLELFSWHAFKQPSPIEDFATHLTDMVAYSGRFP 851

Query: 195  LALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQEL-EKKIFLDIACFF 253
            LALEVLGS+LSG  + EW+  LE+L+  P  E+   L++SFDGL+++ +K+IFLDIACFF
Sbjct: 852  LALEVLGSYLSGCKITEWQKVLEKLKCIPHDEVQKKLKVSFDGLKDVTDKQIFLDIACFF 911

Query: 254  KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQELGQQIVQRQSPE 312
             G D++     L GC F   IGI+VL+E+ L+TV N N L MHDLL+++G+QI+  +SP 
Sbjct: 912  IGMDKNDAIQILNGCRFFADIGIKVLVERSLVTVDNRNKLRMHDLLRDMGRQIIYEESPF 971

Query: 313  ELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLK 372
            +   RSRLW+ E+   VL++  GT  V+G+VL+ +  +N+V  C + KAF KM  LRLL+
Sbjct: 972  DPENRSRLWRREDALDVLSKHKGTNAVKGLVLE-FPIKNKV--CLNTKAFKKMNKLRLLR 1028

Query: 373  ICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLD 432
            +  ++L    +YLS  LR L W G+P  + P+  Q    + + + YS + ++WK  K L+
Sbjct: 1029 LGGVKLNGDFKYLSEELRWLCWHGFPSTYTPAEFQQGSLVVVELKYSNLKQIWKKCKMLE 1088

Query: 433  KLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSL 492
             LK++ LSHS NL   PDF+  PNLEK++L+GC  L  +  S+   +KL+++N+ DCT  
Sbjct: 1089 NLKILNLSHSLNLTETPDFSYMPNLEKIVLKGCPSLSTVSHSIGSLHKLLLINLTDCT-- 1146

Query: 493  ITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLE 552
                            L+ LP +I  LK L TL +SG  K  +  E +E ME L  L  +
Sbjct: 1147 ---------------GLRKLPKSIYKLKSLETLILSGCSKINKLEEDLEQMESLKTLIAD 1191

Query: 553  GTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVR 612
             TAI  +P SI  L  +  ++ +                        G S+   FP ++R
Sbjct: 1192 KTAITKVPFSIVRLKSIGYISFRG---------------------FEGFSR-DVFPSLIR 1229

Query: 613  SMKDLSELFLDGTSIKEVPSSI---ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNL 669
            S    S   +      E  SS+   + LTKL  L + +C + ++L   +  +  L  L  
Sbjct: 1230 SWLSPSNNVISLVQTSESMSSLGTFKDLTKLRSLCV-ECGSELQLTKDVARI--LDVLKA 1286

Query: 670  SGCFKLE 676
            + C KLE
Sbjct: 1287 TNCHKLE 1293



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/315 (33%), Positives = 171/315 (54%), Gaps = 36/315 (11%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++SR + +  L+    S + +IGI GM G+GKTTIA+ +Y  I   F    FL       
Sbjct: 198 INSRVQDVIQLLKQSKSPL-LIGIWGMAGIGKTTIAQAIYHQIGPYFADKFFL------- 249

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
                   Q++L+  + +  +  I  +  G  +L  R + K++LLV+D+V  ++QL +L 
Sbjct: 250 --------QQKLIFDIDQGTEIKIRKIESGKQILKYRFRHKRILLVLDNVDKLEQLNALC 301

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            N EWFG GS+IIITSR+ HLLK HG D +Y+   L+  E+L+LFN              
Sbjct: 302 ENPEWFGVGSKIIITSRNRHLLKEHGFDHIYRVKELDGSESLELFNYG------------ 349

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIE--PPSEILDILQISFDGL 238
                ++ Y+GG P AL+ +G+FL G+ + +W+  L R +    P  EIL+ L++SF+ L
Sbjct: 350 -----VVAYSGGWPPALKEVGNFLHGKELHKWKDVLRRYQTFDLPSPEILEDLEMSFNDL 404

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDL 297
            + EK IFLDIA F  G +++ V   L        + I +L +K  +T+   N L M  +
Sbjct: 405 SDEEKHIFLDIAYFCIGMNQNDVLQTLNRSTQCAALQINLLEDKSFLTIDKKNNLEMQVV 464

Query: 298 LQELGQQIVQRQSPE 312
           LQ + + I++ ++ +
Sbjct: 465 LQAMAKDIIKSETSQ 479



 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/302 (36%), Positives = 164/302 (54%), Gaps = 23/302 (7%)

Query: 21   MIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKG--GLVSLQRQLLSQLLK 78
            ++GI GM G+GK+TIA V+Y      F+    L  +  I  K   GL SLQ  L     +
Sbjct: 1723 LVGIWGMTGIGKSTIANVIYHKFGPFFQGFCLLKTISGICKKKIHGLTSLQESLA----E 1778

Query: 79   LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
               N + ++  G +++    Q K+VL+V+DDV  + QL+ L G+R WFG+GS+IIIT+RD
Sbjct: 1779 FYSNKL-SIESGKNIIKRSFQHKRVLIVLDDVDKLDQLKVLCGSRYWFGAGSKIIITTRD 1837

Query: 139  EHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV-QLSARIIRYAGGLPLAL 197
              LLK HGVD +Y    LN  E+L L N   +      Q+   + S  ++  + GLPL  
Sbjct: 1838 RRLLKQHGVDHIYSVKELNERESLALLNWGGYSLPTNTQQYFGEPSRELVTNSWGLPLCK 1897

Query: 198  EVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGND 257
             VL S             LERL I P   + + L+ SF  L + EK++FLDIACFF G  
Sbjct: 1898 NVLKS-------------LERLSI-PAPRLQEALEKSFRDLSDEEKQVFLDIACFFVGKK 1943

Query: 258  RDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELGQQIVQRQSPEELGK 316
            ++ V   L     +  + I +L +K LIT+  +N + MH +LQ + + I++R+S ++  +
Sbjct: 1944 QNDVQQILNKSKQYVALQISLLEDKSLITIDEDNKIQMHVMLQAMARGIIKRESSQKTDQ 2003

Query: 317  RS 318
             S
Sbjct: 2004 VS 2005



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 19/147 (12%)

Query: 579  SLEILPVTVSNLK-----C-----LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSI 627
            SL ++ +  SNLK     C     L+ L LS    L + P+    M +L ++ L G  S+
Sbjct: 1066 SLVVVELKYSNLKQIWKKCKMLENLKILNLSHSLNLTETPDF-SYMPNLEKIVLKGCPSL 1124

Query: 628  KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
              V  SI  L KL L+NL+DC  L +LP SI  LKSL+TL LSGC K+  + E L Q+ES
Sbjct: 1125 STVSHSIGSLHKLLLINLTDCTGLRKLPKSIYKLKSLETLILSGCSKINKLEEDLEQMES 1184

Query: 688  LEELDISGTAVPHSTSWYSYIPINLMR 714
            L+ L    TA+       + +P +++R
Sbjct: 1185 LKTLIADKTAI-------TKVPFSIVR 1204


>gi|356560721|ref|XP_003548637.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1048

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 233/567 (41%), Positives = 350/567 (61%), Gaps = 25/567 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           ++ R +++  ++++ S+ V +IGI GMGG GKTTIA+ +Y+ I   F    F++N+RE+ 
Sbjct: 195 LEPRVQEVIGVIENQSTKVCIIGIWGMGGSGKTTIAKAIYNQIHRRFMDKSFIENIREVC 254

Query: 60  -SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            +   G V LQ QLLS +LK  +  + ++  G  M+  RL  K+  +V+DDV +  QL++
Sbjct: 255 ETDGRGHVHLQEQLLSDVLKTKEK-VRSIGMGTTMIDKRLSGKRTFIVLDDVNEFGQLKN 313

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L GNR+WFG GS IIIT+RD  LL    VD VY    ++ +E+L+LF+  AF   +P ++
Sbjct: 314 LCGNRKWFGQGSVIIITTRDRRLLDQLKVDYVYDVDKMDENESLELFSWHAFNEAKPKED 373

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             +L+  ++ Y GGLPLALEVLGS+L+ R   +W S L +LE  P  ++ + L+ISFDGL
Sbjct: 374 FNELARNVVAYCGGLPLALEVLGSYLNERRKKDWESVLSKLERIPNDQVQEKLRISFDGL 433

Query: 239 QE-LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHD 296
            + +EK IFLDI CFF G DR Y+T  L+GCG H  IGI VLI++ L+ V  NN L MH 
Sbjct: 434 SDHMEKDIFLDICCFFIGKDRAYITEILKGCGLHADIGITVLIDRSLLKVEKNNKLGMHQ 493

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL+++G++I+   S +E GKRSRLW  E+V  VLT +TGT  +EG+ L  +    +   C
Sbjct: 494 LLRDMGREIICESSRKEPGKRSRLWFHEDVLDVLTNNTGTVAIEGLALKLHFAGRD---C 550

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            +A AF +M  LRLL++ ++QL     YLS +LR + W+G+P K++P+N  ++  I + +
Sbjct: 551 FNAYAFEEMKRLRLLQLDHVQLTGDYGYLSKQLRWISWQGFPSKYIPNNFYLEGVIAMDL 610

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
            +S +   WK  + L  LK++ LSHS+ L   P+F+  PNLEKLIL+ C RL ++H S+ 
Sbjct: 611 KHSNLRLFWKEPQVLKWLKILNLSHSKYLTETPNFSKLPNLEKLILKDCPRLCKVHKSIG 670

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
               L ++N+KDC +                 L +LP  +  LK + TL +SG  K  + 
Sbjct: 671 DLCNLHLINLKDCKT-----------------LGNLPRGVYKLKSVKTLILSGCSKIDKL 713

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSI 563
            E +  ME L+ L  E TA++ +P SI
Sbjct: 714 EEDIVQMESLTTLIAENTALKQVPFSI 740



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 156/357 (43%), Gaps = 40/357 (11%)

Query: 566 LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DG 624
           L G++ ++LK+  +L +       LK L+ L LS    L + P   + + +L +L L D 
Sbjct: 602 LEGVIAMDLKHS-NLRLFWKEPQVLKWLKILNLSHSKYLTETPNFSK-LPNLEKLILKDC 659

Query: 625 TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQ 684
             + +V  SI  L  L L+NL DCK L  LP  +  LKS+KTL LSGC K++ + E + Q
Sbjct: 660 PRLCKVHKSIGDLCNLHLINLKDCKTLGNLPRGVYKLKSVKTLILSGCSKIDKLEEDIVQ 719

Query: 685 IESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGA 744
           +ESL  L    TA+         +P +++  S ++   SL G     + N+    +    
Sbjct: 720 MESLTTLIAENTALKQ-------VPFSIV-NSKSIGYISLCGYEGFAR-NVFPSIIRSWM 770

Query: 745 LP-----SDIGNLCSLKELYLSKN--SFVS--LPTSITHLSKLLNIELEDCKRLQSLPQL 795
            P     S I   CS     +S +  S+ S  L   +  LS L +I +    R  +  Q+
Sbjct: 771 SPTLNPLSYISPFCSTSSYLVSLDMQSYNSGDLGPMLRSLSNLRSILV----RCDTDSQI 826

Query: 796 PPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVS- 854
              +R +  N      T L+      S S+       L  +G+    F+ L + +  +S 
Sbjct: 827 SKQVRTILDNVYGVSCTELE----ITSQSSEHYLRSYLIGIGSYQDVFNTLSDSISELSL 882

Query: 855 ------NTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
                  T +   V +P    P WF +  EG S+  T P +     ++ G  +C V+
Sbjct: 883 LMLQGLTTSESSDVFLPSDNDPYWFAHMGEGHSVFFTVPEDC----RMKGMTLCVVY 935


>gi|227438183|gb|ACP30581.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1232

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 312/944 (33%), Positives = 485/944 (51%), Gaps = 80/944 (8%)

Query: 22   IGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLAD 81
            IG+ GM G+GKTT+A  ++D +S  +EAS F+ +  +   + GL  L  +   + L+  +
Sbjct: 179  IGLWGMAGIGKTTLAEAIFDQMSGGYEASCFIKDFNKKFHEKGLHCLLEEHFGKTLR-EE 237

Query: 82   NSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHL 141
              + ++     +L + L +K+VL+V+DDV      +   G   WF  GS IIITSRD+ +
Sbjct: 238  FGVNSLITRPVLLRNVLGQKRVLVVLDDVRKALDAELFLGGFNWFCPGSLIIITSRDKQV 297

Query: 142  LKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLG 201
                 V ++Y+  GLN DEA QLF+  AF      +   +L  ++I YA G PLAL+  G
Sbjct: 298  FSLCQVKQIYEVPGLNEDEAQQLFSRFAFGKDIKHENLQKLLPKVIEYADGNPLALKYYG 357

Query: 202  SFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYV 261
               +  +  E  +    LE  PP EI D ++ ++D L   EK IFLDI C F+G   DYV
Sbjct: 358  R-KTRDNPKEVENAFLTLEQSPPHEIYDAVKSTYDLLSSNEKNIFLDIVCLFRGESIDYV 416

Query: 262  TNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLW 321
             + LEGCGF P +GI VL+EKCL+++    + MH+L+Q++G++I+ R+      +RSRLW
Sbjct: 417  MHLLEGCGFFPRVGINVLVEKCLVSISQGKVVMHNLIQDIGRKIINRRK-----RRSRLW 471

Query: 322  KEEEVCHVLTEST--GTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICN---- 375
            K   + H L +    G+E +E I LD     +++    +  AF KM NLR LKIC+    
Sbjct: 472  KPSSIKHFLEDKNVLGSEDIEAISLDT----SDLNFDLNPMAFEKMYNLRYLKICSSKPG 527

Query: 376  ----LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHL 431
                + LP GL+ L + LRLL W  +PL  LP        + + MC S++  LW+G K L
Sbjct: 528  SYSTIHLPKGLKSLPDELRLLHWENFPLLSLPQGFDPRNLVILNMCSSKLQRLWEGTKEL 587

Query: 432  DKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTS 491
            + LK + L HS  L+ + +   A N+E + L+GCTRL     +   H+ L ++N+  C +
Sbjct: 588  EMLKRIKLCHSRKLVDIQELQNARNIEVIDLQGCTRLERFIDTGHFHH-LRVINLSGCIN 646

Query: 492  LITLPG---KILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHM----- 543
            +   P    KI    L++  ++S+P      K  S     G  KF +  +  E +     
Sbjct: 647  IKVFPKVPPKIEELYLKQTAIRSIPNVTLSSKDNSFSYDHGGHKFLDLEDSSESIMVYLE 706

Query: 544  --------------------EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEIL 583
                                 +L +L+L GT+I+ LP S+  LS LV+L+L+NC+ L+ +
Sbjct: 707  QLKVLDLSRCIELEDIQVIPNNLKKLYLGGTSIQELP-SLVHLSELVVLDLENCKQLQKI 765

Query: 584  PVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELL 643
            P+ +S L  L  L LSGCS+L+   E +   ++L EL+L GT+I+EVPSSI  L++L +L
Sbjct: 766  PLRLSTLTSLAVLNLSGCSELEDI-EDLNLPRNLEELYLAGTAIQEVPSSITYLSELVIL 824

Query: 644  NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTS 703
            +L +CK L RLP  I  LKSL TL L   F +E     L  I +  E         +   
Sbjct: 825  DLQNCKRLRRLPMEISNLKSLVTLKLPRLFTVETGMSNL--ISAFNE---------NVCQ 873

Query: 704  WYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKN 763
               Y+P   +  S  L    +    +L  L+L + +LM   +P +I +L ++  L LS+N
Sbjct: 874  RQDYLPQPRLLPSSRLLHGLVPRFYALVSLSLCNASLMH--IPEEICSLATVTVLDLSRN 931

Query: 764  SFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSD 823
             F  +P SI  L KL ++ L  C+ L+SLP+LP +++ + V+GC SL ++  A +   S 
Sbjct: 932  GFRKIPESIKQLCKLHSLRLRHCRNLRSLPELPQSLKILNVHGCVSLESVSWASEQFPSH 991

Query: 824  STMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQH---------LSVVVPGSEIPEWFM 874
             T   C +    +  K +A  + +      S  ++H          S+  P         
Sbjct: 992  YTFNNCFNKSPEVARKRVAKGLAK----VASIGKEHEQELIKALAFSICAPADADQTSSY 1047

Query: 875  YQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFG 918
                GS   +   S+L N   L+G+AI  V   + +S  N+  G
Sbjct: 1048 NLRTGSFAMLELTSSLRN--TLLGFAIFVVVTFMDDSHNNDGLG 1089


>gi|356503065|ref|XP_003520332.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1047

 Score =  411 bits (1056), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 237/572 (41%), Positives = 348/572 (60%), Gaps = 26/572 (4%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKG-G 64
           E +RF+  +  S +  IGI GMGG GKTT A+ +Y+ I   F    F++++RE   +  G
Sbjct: 206 EVIRFIETTTYSCI--IGIWGMGGSGKTTTAKAIYNQIHRSFMDKSFIEDIREACKRDRG 263

Query: 65  LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNRE 124
            + LQ+QLLS +LK     I ++  G  ++ +RL +K++L+V+DDV    QL++L GN +
Sbjct: 264 QIRLQKQLLSDVLK-TKVEIHSIGRGTTVIENRLSKKRLLIVLDDVNKSGQLKALCGNLQ 322

Query: 125 WFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSA 184
           W G GS IIIT+RD+HL     VD V++   ++ +E+L+L +  AF+  +P ++  +L+ 
Sbjct: 323 WIGEGSVIIITTRDKHLFTGLKVDYVHEMKEMHANESLELLSWHAFREAKPKEDFNELAR 382

Query: 185 RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ-ELEK 243
            ++ Y GGLPLALE LG +L+ R+ +EWRS L +LE  P   + +IL+ISFDGL  E EK
Sbjct: 383 NVVAYCGGLPLALEDLGLYLTNRTTNEWRSALSKLETTPNPHVQEILKISFDGLNDEKEK 442

Query: 244 KIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELG 302
            IFLD+ CFF G D  YVT  L GCG H   GI VLI++ LI V  NN L MH+L+QE+G
Sbjct: 443 DIFLDVCCFFIGKDIAYVTEILNGCGLHSDCGIPVLIDRSLIKVEKNNKLGMHNLVQEMG 502

Query: 303 QQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAF 362
           ++I+++ S ++ GKRSRLW   EV  VLT++TGTE+VEG+ L  + +      C    AF
Sbjct: 503 REIIRQSSRKKPGKRSRLWFNVEVVDVLTKNTGTEVVEGLALKFHVNSRN---CFKTCAF 559

Query: 363 SKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIG 422
            KM  LRLL++ N+QL     YLS  LR + W+G+P K++P N  M+  I I +  S + 
Sbjct: 560 EKMQRLRLLQLENIQLAGDYGYLSKELRWMCWQGFPSKYIPKNFNMENVIAIDLKRSNLR 619

Query: 423 ELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLI 482
            +WK  + L  LK++ LSHS+ L   PDF+   NLEKLIL+ C RL ++H S+     LI
Sbjct: 620 LVWKEPQDLASLKILNLSHSKYLTETPDFSKLRNLEKLILKDCPRLCKVHKSIGDLRNLI 679

Query: 483 ILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEH 542
           +LN+KDCTS                 L +LP ++  LK + TL +SG  K  +  E +  
Sbjct: 680 LLNLKDCTS-----------------LGNLPRSVYKLKSVKTLILSGCSKIDKLEEDIVQ 722

Query: 543 MEHLSELHLEGTAIRGLPLSIELLSGLVLLNL 574
           ME L+ L  +   ++ +P SI  L  +  ++L
Sbjct: 723 MESLTTLIAKNVVVKEVPFSIVTLKSIEYISL 754



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 146/341 (42%), Gaps = 47/341 (13%)

Query: 589 NLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSD 647
           +L  L+ L LS    L + P+  + +++L +L L D   + +V  SI  L  L LLNL D
Sbjct: 627 DLASLKILNLSHSKYLTETPDFSK-LRNLEKLILKDCPRLCKVHKSIGDLRNLILLNLKD 685

Query: 648 CKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSY 707
           C +L  LP S+  LKS+KTL LSGC K++ + E + Q+ESL  L      V         
Sbjct: 686 CTSLGNLPRSVYKLKSVKTLILSGCSKIDKLEEDIVQMESLTTLIAKNVVVKE------- 738

Query: 708 IPINLMRKSVALKLPSLSGLCSLRKL--NLTDCNLMEGALP-----SDIGNLCS----LK 756
           +P ++    V LK      LC    L  N+    ++    P     S I   C     L 
Sbjct: 739 VPFSI----VTLKSIEYISLCEYEGLSHNVFPSIILSWMSPTINPLSYIHPFCCISSFLV 794

Query: 757 ELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDA 816
            +++  N+F  +   +  L  L ++ ++    LQ L  +   +  +       L     A
Sbjct: 795 SMHIQNNAFGDVAPMLGGLGILRSVLVQCDTELQLLKLVRTIVDYIYDVYFTDLEITSYA 854

Query: 817 LKLCKS--DSTMIACLDSLKLLGNKSLAFSMLREYLEAVSN----TRQHLSV------VV 864
            ++ K    S +I        +G+    F +L + +  V +      Q L++       +
Sbjct: 855 SRISKHSLSSWLIG-------IGSYQEVFQILSKSIHEVRSCFLLMLQGLAINDSCDAFL 907

Query: 865 PGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
           PG   P W +   EG+S+  T P N     ++ G A+C V+
Sbjct: 908 PGDNDPHWLVRMGEGNSVYFTVPENC----RMKGMALCVVY 944


>gi|124361211|gb|ABN09183.1| TIR; AAA ATPase [Medicago truncatula]
          Length = 1474

 Score =  411 bits (1056), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 233/568 (41%), Positives = 352/568 (61%), Gaps = 24/568 (4%)

Query: 1    MDSRCEK-LRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            +DSR +  ++ L +  S D  ++GI GMGG+GKTTIA+  Y+ I H+FEA  FL NVRE+
Sbjct: 572  VDSRVQDVIQLLNNQESKDPLLLGIWGMGGIGKTTIAKAAYNKIRHDFEAKSFLLNVREV 631

Query: 60   -SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
                 G+VSLQ++LLS + K     I  V  G  +L  RL+ K++ LV+DDV  V QL +
Sbjct: 632  WEQDNGVVSLQQRLLSDIYKTTKIKIETVESGKMILQERLRHKRIFLVLDDVNKVDQLNA 691

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            L G+ EWFG GSRI+IT+RD+ LL    VD VY+   ++ +E+L+LF+  AFK   P++ 
Sbjct: 692  LCGSHEWFGEGSRIMITTRDDDLLSRLKVDYVYRMKEMDGNESLELFSWHAFKQPIPIEG 751

Query: 179  CVQLSARIIRYAGGLPLALEVLGSF-LSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
               LS  ++ Y+GGLP+AL+V+GSF L+ R   EW+S LE+L++ P  E+L+ L+ISFDG
Sbjct: 752  FGDLSTDVVMYSGGLPIALQVIGSFLLTRRRKKEWKSVLEKLKLIPNDEVLEKLKISFDG 811

Query: 238  LQELE-KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMH 295
            L + + K+IFLDIA FF G D++ VT  LEGCG    IGI +L++K L+TV   N + MH
Sbjct: 812  LSDDDVKEIFLDIAFFFIGMDQEEVTTILEGCGHFADIGISLLVQKSLVTVDRKNKIGMH 871

Query: 296  DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
            DLL+++G++IV+++S E   + SRLW+ E+V  VL+++T    V+G+ L     ++  Y+
Sbjct: 872  DLLRDMGREIVRKKSIEISKEPSRLWRYEDVDSVLSKATRALDVKGLTLKMSRMDSRTYM 931

Query: 356  CASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
                K F K+  L+ L++  +QL    +YLS  +R L W G+PLK+ P     +  + + 
Sbjct: 932  --ETKDFEKINKLKFLQLAGVQLEGNYKYLSRDIRWLCWHGFPLKYTPEEFHQEHLVAVD 989

Query: 416  MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
            + YS + ++WK  + L +LK + LSHS NL + PDF+  PNLEKLIL+ C  L  + P++
Sbjct: 990  LKYSHLEQVWKKSQLLKELKFLNLSHSHNLKQTPDFSYLPNLEKLILKDCPNLSSVSPNI 1049

Query: 476  LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
                K++++N+KDCT L                   LP +I  LK + TL VSG  K  +
Sbjct: 1050 GNLKKILLINLKDCTGLC-----------------ELPRSIYKLKSVKTLIVSGCTKIDK 1092

Query: 536  FPEIVEHMEHLSELHLEGTAIRGLPLSI 563
              E +E M  L+ L  + T++  +P ++
Sbjct: 1093 LEEDIEQMTSLTILVADKTSVTRVPFAV 1120



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/315 (40%), Positives = 188/315 (59%), Gaps = 5/315 (1%)

Query: 1   MDSRCEK-LRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +DSR +  ++ L    S D R++GI GMGG+GKTTIA+  Y+ I  +FEA  FL NVRE+
Sbjct: 70  VDSRVQDVIQLLNGQESKDPRLLGIWGMGGIGKTTIAKAAYNKIHRDFEAKSFLLNVREV 129

Query: 60  -SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
                G+VSLQ++LLS + K     I  V  G  +L  RL  K++ LV+DDV  + QL +
Sbjct: 130 WEQDNGIVSLQQRLLSDIYKTTKIKIETVESGKMILQERLCHKRIFLVLDDVNKLDQLNA 189

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G+  WFG GSRIIIT+RD+ LL    V  VY+   ++ +E+L+LF+   FK   P++ 
Sbjct: 190 LCGSHGWFGEGSRIIITTRDDDLLGRLKVHYVYRMKEMDSNESLELFSWHVFKQPIPIEG 249

Query: 179 CVQLSARIIRYAGGLPLALEVLGSF-LSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
              LS  +++Y+GG PLALEV+GSF L+ RS  EW+S LE+L       I D+L++SFD 
Sbjct: 250 FGDLSTDVVKYSGGSPLALEVIGSFLLTRRSKKEWKSILEKLTKPDVKLIPDMLRLSFDN 309

Query: 238 LQELEKKIFLDIACF-FKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT-LWMH 295
           L +  K+ FLDIAC    G   D +    +       +G+  L+   L+ + +   +   
Sbjct: 310 LSDNIKETFLDIACLNLSGMSLDDLIQIFKKDVHFKELGMEELVTISLVQIDSEKRIERD 369

Query: 296 DLLQELGQQIVQRQS 310
           DLLQ LG++I + +S
Sbjct: 370 DLLQLLGREIRKEKS 384



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 122/494 (24%), Positives = 197/494 (39%), Gaps = 86/494 (17%)

Query: 461  ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITL-------------------PGK--- 498
            ILEGC    +I  SLL+   L+ ++ K+   +  L                   P +   
Sbjct: 839  ILEGCGHFADIGISLLVQKSLVTVDRKNKIGMHDLLRDMGREIVRKKSIEISKEPSRLWR 898

Query: 499  ------ILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVE-HMEHLSELHL 551
                  +L K+   L++K L         +S +D    ++ ++F +I +     L+ + L
Sbjct: 899  YEDVDSVLSKATRALDVKGLTLK------MSRMDSRTYMETKDFEKINKLKFLQLAGVQL 952

Query: 552  EGT------AIR-----GLPLSIE----LLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
            EG        IR     G PL           LV ++LK    LE +      LK L+ L
Sbjct: 953  EGNYKYLSRDIRWLCWHGFPLKYTPEEFHQEHLVAVDLKYSH-LEQVWKKSQLLKELKFL 1011

Query: 597  KLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
             LS    LK+ P+    + +L +L L D  ++  V  +I  L K+ L+NL DC  L  LP
Sbjct: 1012 NLSHSHNLKQTPDF-SYLPNLEKLILKDCPNLSSVSPNIGNLKKILLINLKDCTGLCELP 1070

Query: 656  SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRK 715
             SI  LKS+KTL +SGC K++ + E + Q+ SL  L    T+V       + +P  ++R 
Sbjct: 1071 RSIYKLKSVKTLIVSGCTKIDKLEEDIEQMTSLTILVADKTSV-------TRVPFAVVR- 1122

Query: 716  SVALKLPSLSGLCSLRK-----LNLTDCNLMEGALP--SDIGNLCSLKELYLSKNSFVSL 768
            S ++   SL G     +     +  +  +   G LP         SL+      NSF  L
Sbjct: 1123 SKSIGFISLCGFEGFARNVFPSIIQSWMSPTNGILPLVQTFAGTSSLEFFDEQDNSFYGL 1182

Query: 769  PTSITHLSKLLNIELEDCKRLQSLPQ-LPPNIRQVRVNGCASLVTLLDALKLCK-SDSTM 826
            P+    L  L  +  + CK    L Q L   +  +    C  L  + +  +  K   S  
Sbjct: 1183 PSFHKDLPNLQRLWFK-CKSEAQLNQTLASILDNLHTKSCEELEAMQNTAQSSKFVTSAS 1241

Query: 827  IACLDSLKL-------------LGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWF 873
              C   +               +G      + L+E +        + S ++PG   P+W 
Sbjct: 1242 THCCSQVPSSSSQNSLTSLFIQIGMNCRVTNTLKENI--FQKMPPNGSGLLPGDNYPDWL 1299

Query: 874  MYQNEGSSITVTRP 887
             + + GSS+T   P
Sbjct: 1300 AFNDNGSSVTFEVP 1313


>gi|357509247|ref|XP_003624912.1| TMV resistance protein N [Medicago truncatula]
 gi|355499927|gb|AES81130.1| TMV resistance protein N [Medicago truncatula]
          Length = 2106

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 233/568 (41%), Positives = 352/568 (61%), Gaps = 24/568 (4%)

Query: 1    MDSRCEK-LRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            +DSR +  ++ L +  S D  ++GI GMGG+GKTTIA+  Y+ I H+FEA  FL NVRE+
Sbjct: 1204 VDSRVQDVIQLLNNQESKDPLLLGIWGMGGIGKTTIAKAAYNKIRHDFEAKSFLLNVREV 1263

Query: 60   -SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
                 G+VSLQ++LLS + K     I  V  G  +L  RL+ K++ LV+DDV  V QL +
Sbjct: 1264 WEQDNGVVSLQQRLLSDIYKTTKIKIETVESGKMILQERLRHKRIFLVLDDVNKVDQLNA 1323

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            L G+ EWFG GSRI+IT+RD+ LL    VD VY+   ++ +E+L+LF+  AFK   P++ 
Sbjct: 1324 LCGSHEWFGEGSRIMITTRDDDLLSRLKVDYVYRMKEMDGNESLELFSWHAFKQPIPIEG 1383

Query: 179  CVQLSARIIRYAGGLPLALEVLGSF-LSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
               LS  ++ Y+GGLP+AL+V+GSF L+ R   EW+S LE+L++ P  E+L+ L+ISFDG
Sbjct: 1384 FGDLSTDVVMYSGGLPIALQVIGSFLLTRRRKKEWKSVLEKLKLIPNDEVLEKLKISFDG 1443

Query: 238  LQELE-KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMH 295
            L + + K+IFLDIA FF G D++ VT  LEGCG    IGI +L++K L+TV   N + MH
Sbjct: 1444 LSDDDVKEIFLDIAFFFIGMDQEEVTTILEGCGHFADIGISLLVQKSLVTVDRKNKIGMH 1503

Query: 296  DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
            DLL+++G++IV+++S E   + SRLW+ E+V  VL+++T    V+G+ L     ++  Y+
Sbjct: 1504 DLLRDMGREIVRKKSIEISKEPSRLWRYEDVDSVLSKATRALDVKGLTLKMSRMDSRTYM 1563

Query: 356  CASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
                K F K+  L+ L++  +QL    +YLS  +R L W G+PLK+ P     +  + + 
Sbjct: 1564 --ETKDFEKINKLKFLQLAGVQLEGNYKYLSRDIRWLCWHGFPLKYTPEEFHQEHLVAVD 1621

Query: 416  MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
            + YS + ++WK  + L +LK + LSHS NL + PDF+  PNLEKLIL+ C  L  + P++
Sbjct: 1622 LKYSHLEQVWKKSQLLKELKFLNLSHSHNLKQTPDFSYLPNLEKLILKDCPNLSSVSPNI 1681

Query: 476  LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
                K++++N+KDCT L                   LP +I  LK + TL VSG  K  +
Sbjct: 1682 GNLKKILLINLKDCTGLC-----------------ELPRSIYKLKSVKTLIVSGCTKIDK 1724

Query: 536  FPEIVEHMEHLSELHLEGTAIRGLPLSI 563
              E +E M  L+ L  + T++  +P ++
Sbjct: 1725 LEEDIEQMTSLTILVADKTSVTRVPFAV 1752



 Score =  209 bits (532), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 127/324 (39%), Positives = 194/324 (59%), Gaps = 6/324 (1%)

Query: 3   SRCEKLRFLMDSGSSDVRMI-GICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI-S 60
           SR + +  L++S  S   ++ G+ GMGG+GKTTIA+  Y+ I H+FEA  FL NVRE+  
Sbjct: 194 SRVQDIIQLLNSQESKSPLLLGVWGMGGIGKTTIAKAAYNKIHHDFEAKSFLPNVREVWE 253

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
              G+VSLQ+QLLS + K     I  V  G  +L  RL+ K++ LV+DDV  + QL +L 
Sbjct: 254 QDNGVVSLQQQLLSDIYKTTKIKIDTVESGKMILQERLRHKRIFLVLDDVNKLDQLNALC 313

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G+  WFG GSRIIIT+RD+ LL    V  VY+   ++ +E+L+LF+  AFK   P++   
Sbjct: 314 GSHGWFGEGSRIIITTRDDDLLGRLKVHYVYRMKEMDSNESLELFSWHAFKQPIPIEGFG 373

Query: 181 QLSARIIRYAGGLPLALEVLGSF-LSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           +LS  +++Y+ GLPLAL+V+GSF L+ R    W+  LE+L  +P  +I ++L++ FD L 
Sbjct: 374 ELSTDVVKYSRGLPLALQVIGSFLLTRRRKKVWKRVLEKL-TKPDDKIQEVLKLIFDNLS 432

Query: 240 ELEKKIFLDIACF-FKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT-LWMHDL 297
           +  K+ FLDIAC    G   D +    +       +G+  L+   L+ + +   + MHDL
Sbjct: 433 DNIKETFLDIACLNLSGMSLDDLLQIFQKDVHFTELGMEELVINGLVNLDSEKRIGMHDL 492

Query: 298 LQELGQQIVQRQSPEELGKRSRLW 321
           +Q  G++I Q +S       S++W
Sbjct: 493 VQLFGREIRQEKSTGMAAVSSKIW 516



 Score =  207 bits (526), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 130/322 (40%), Positives = 189/322 (58%), Gaps = 5/322 (1%)

Query: 1    MDSRCEK-LRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            +DSR +  ++ L    S D R++GI GMGG+GKTTIA+  Y+ I  +FEA  FL NVRE+
Sbjct: 702  VDSRVQDVIQLLNGQESKDPRLLGIWGMGGIGKTTIAKAAYNKIHRDFEAKSFLLNVREV 761

Query: 60   -SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
                 G+VSLQ++LLS + K     I  V  G  +L  RL  K++ LV+DDV  + QL +
Sbjct: 762  WEQDNGIVSLQQRLLSDIYKTTKIKIETVESGKMILQERLCHKRIFLVLDDVNKLDQLNA 821

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            L G+  WFG GSRIIIT+RD+ LL    V  VY+   ++ +E+L+LF+   FK   P++ 
Sbjct: 822  LCGSHGWFGEGSRIIITTRDDDLLGRLKVHYVYRMKEMDSNESLELFSWHVFKQPIPIEG 881

Query: 179  CVQLSARIIRYAGGLPLALEVLGSF-LSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
               LS  +++Y+GG PLALEV+GSF L+ RS  EW+S LE+L       I D+L++SFD 
Sbjct: 882  FGDLSTDVVKYSGGSPLALEVIGSFLLTRRSKKEWKSILEKLTKPDVKLIPDMLRLSFDN 941

Query: 238  LQELEKKIFLDIACF-FKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT-LWMH 295
            L +  K+ FLDIAC    G   D +    +       +G+  L+   L+ + +   +   
Sbjct: 942  LSDNIKETFLDIACLNLSGMSLDDLIQIFKKDVHFKELGMEELVTISLVQIDSEKRIERD 1001

Query: 296  DLLQELGQQIVQRQSPEELGKR 317
            DLLQ LG++I + +S      R
Sbjct: 1002 DLLQLLGREIRKEKSTAMAAGR 1023



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 122/494 (24%), Positives = 197/494 (39%), Gaps = 86/494 (17%)

Query: 461  ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITL-------------------PGK--- 498
            ILEGC    +I  SLL+   L+ ++ K+   +  L                   P +   
Sbjct: 1471 ILEGCGHFADIGISLLVQKSLVTVDRKNKIGMHDLLRDMGREIVRKKSIEISKEPSRLWR 1530

Query: 499  ------ILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVE-HMEHLSELHL 551
                  +L K+   L++K L         +S +D    ++ ++F +I +     L+ + L
Sbjct: 1531 YEDVDSVLSKATRALDVKGLTLK------MSRMDSRTYMETKDFEKINKLKFLQLAGVQL 1584

Query: 552  EGT------AIR-----GLPLSIE----LLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
            EG        IR     G PL           LV ++LK    LE +      LK L+ L
Sbjct: 1585 EGNYKYLSRDIRWLCWHGFPLKYTPEEFHQEHLVAVDLKYSH-LEQVWKKSQLLKELKFL 1643

Query: 597  KLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
             LS    LK+ P+    + +L +L L D  ++  V  +I  L K+ L+NL DC  L  LP
Sbjct: 1644 NLSHSHNLKQTPDF-SYLPNLEKLILKDCPNLSSVSPNIGNLKKILLINLKDCTGLCELP 1702

Query: 656  SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRK 715
             SI  LKS+KTL +SGC K++ + E + Q+ SL  L    T+V       + +P  ++R 
Sbjct: 1703 RSIYKLKSVKTLIVSGCTKIDKLEEDIEQMTSLTILVADKTSV-------TRVPFAVVR- 1754

Query: 716  SVALKLPSLSGLCSLRK-----LNLTDCNLMEGALP--SDIGNLCSLKELYLSKNSFVSL 768
            S ++   SL G     +     +  +  +   G LP         SL+      NSF  L
Sbjct: 1755 SKSIGFISLCGFEGFARNVFPSIIQSWMSPTNGILPLVQTFAGTSSLEFFDEQDNSFYGL 1814

Query: 769  PTSITHLSKLLNIELEDCKRLQSLPQ-LPPNIRQVRVNGCASLVTLLDALKLCK-SDSTM 826
            P+    L  L  +  + CK    L Q L   +  +    C  L  + +  +  K   S  
Sbjct: 1815 PSFHKDLPNLQRLWFK-CKSEAQLNQTLASILDNLHTKSCEELEAMQNTAQSSKFVTSAS 1873

Query: 827  IACLDSLKL-------------LGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWF 873
              C   +               +G      + L+E +        + S ++PG   P+W 
Sbjct: 1874 THCCSQVPSSSSQNSLTSLFIQIGMNCRVTNTLKENI--FQKMPPNGSGLLPGDNYPDWL 1931

Query: 874  MYQNEGSSITVTRP 887
             + + GSS+T   P
Sbjct: 1932 AFNDNGSSVTFEVP 1945


>gi|359486980|ref|XP_003633500.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 852

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 251/561 (44%), Positives = 349/561 (62%), Gaps = 41/561 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M+   EKL+ L+   S+DVRMIGI G+GG+GKTTIA+VVY+ ISH+FE+  FL+NVRE S
Sbjct: 206 MNFHLEKLKSLIKIESNDVRMIGIYGLGGIGKTTIAKVVYNNISHQFESRIFLENVRERS 265

Query: 61  SK-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
                L+ LQ++LL+ ++K  +  I NV +GI+++ +R   KKVLL++DDV ++KQLQ L
Sbjct: 266 KDYSSLLQLQKELLNGVMKGKNKKISNVHEGINVIRNRFHSKKVLLILDDVDNLKQLQFL 325

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG   WFG  SRIIITSRD+H L  HGVD  YK   L+Y E++QLF   AFK   P  + 
Sbjct: 326 AGEHSWFGPRSRIIITSRDQHCLNVHGVDASYKVEALSYKESIQLFCQHAFKQNIPKSDY 385

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V LS  ++ Y  GLPLALEVLGSFL  +SV EW S L++L+  P  E+ ++L+ISFDGL 
Sbjct: 386 VNLSDHVVNYVKGLPLALEVLGSFLFYKSVPEWESALQKLKENPNIEVQNVLKISFDGLD 445

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           + E++IFLDI CFFKG + + VT  ++    H  IGIRVL +KCLIT+  NT+ +HDL++
Sbjct: 446 KKEQEIFLDIVCFFKGWNENDVTRLVK----HARIGIRVLSDKCLITLCGNTITIHDLVE 501

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS- 358
           E+G++IV+ + PEE GK SRLW  +++  VL +  GT+ VE + LD         +C S 
Sbjct: 502 EMGREIVRHKHPEEPGKWSRLWDPKDISLVLRKKMGTKAVEALFLD---------MCKSR 552

Query: 359 -----AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
                 +AF +M  LRLLKI        L Y+      L W GY LK LPSN   +  IE
Sbjct: 553 EISFTTEAFKRMRRLRLLKI--YWSWGFLNYMGKGY--LHWEGYSLKSLPSNFDGENLIE 608

Query: 414 IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
           + + +S I  LW+G K+L++LK++ LS S+ L  +P F+   NLE+L ++GC  L  +  
Sbjct: 609 LNLQHSNIEHLWQGEKYLEELKILNLSESQQLNEIPHFSNMSNLEQLNVKGCRSLDNVDS 668

Query: 474 SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKF 533
           S+    KL +LN++ C  +                 +SLP+TI  L  L  L++      
Sbjct: 669 SVGFLKKLTLLNLRGCQKI-----------------RSLPSTIQNLVSLKKLNLYDCSNL 711

Query: 534 REFPEIVEHMEHLSELHLEGT 554
             FPEI+E ME L  L+L GT
Sbjct: 712 ENFPEIMEDMECLYLLNLSGT 732



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 85/149 (57%), Gaps = 4/149 (2%)

Query: 549 LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
           LH EG +++ LP + +    L+ LNL++  ++E L      L+ L+ L LS   +L + P
Sbjct: 587 LHWEGYSLKSLPSNFDG-ENLIELNLQHS-NIEHLWQGEKYLEELKILNLSESQQLNEIP 644

Query: 609 EIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL 667
               +M +L +L + G  S+  V SS+  L KL LLNL  C+ +  LPS+I  L SLK L
Sbjct: 645 HF-SNMSNLEQLNVKGCRSLDNVDSSVGFLKKLTLLNLRGCQKIRSLPSTIQNLVSLKKL 703

Query: 668 NLSGCFKLENVPETLGQIESLEELDISGT 696
           NL  C  LEN PE +  +E L  L++SGT
Sbjct: 704 NLYDCSNLENFPEIMEDMECLYLLNLSGT 732



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 124/290 (42%), Gaps = 37/290 (12%)

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
           K +  LFLD    +E+  + E   ++  L L      +      +       L+  G + 
Sbjct: 539 KAVEALFLDMCKSREISFTTEAFKRMRRLRLLK----IYWSWGFLNYMGKGYLHWEG-YS 593

Query: 675 LENVPETLGQIESLEELDISGTAVPHSTSWYSYIP----INLMRKSVALKLPSLSGLCSL 730
           L+++P      E+L EL++  + + H      Y+     +NL       ++P  S + +L
Sbjct: 594 LKSLPSNFDG-ENLIELNLQHSNIEHLWQGEKYLEELKILNLSESQQLNEIPHFSNMSNL 652

Query: 731 RKLNLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELEDCKRL 789
            +LN+  C  ++  + S +G L  L  L L       SLP++I +L  L  + L DC  L
Sbjct: 653 EQLNVKGCRSLDN-VDSSVGFLKKLTLLNLRGCQKIRSLPSTIQNLVSLKKLNLYDCSNL 711

Query: 790 QSLPQLPPNIRQVRVNGCASLVTLLDA-------LKLCKSDSTMIACLDSLKLLGNKSLA 842
           ++ P++  ++  + +   +  +T +D+       L+L    +TMI  L+ ++  G     
Sbjct: 712 ENFPEIMEDMECLYLLNLSGTLTTIDSGSKALEFLRLENDPNTMIIFLE-VQFDGYWPAK 770

Query: 843 FSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYN 892
           F M         +TR  L++V  G+          E  S+++T    L+N
Sbjct: 771 FGM--------DSTRNELALVSMGNL---------EVQSVSITGGPTLFN 803


>gi|357469491|ref|XP_003605030.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355506085|gb|AES87227.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1391

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 265/739 (35%), Positives = 410/739 (55%), Gaps = 42/739 (5%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +DSR E+++ L+D+ S D V M+ I G GG+GKTT A  +Y  ISH FEA+ FL NVRE 
Sbjct: 218 LDSRFEQVKSLIDTNSDDAVCMLEIYGGGGIGKTTFAWNIYSKISHRFEATSFLANVREK 277

Query: 60  S--SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
           S  S  GL  LQR LLS++       I +   G  ++  +L  ++VLL++DDV  VKQL+
Sbjct: 278 SNESTRGLEDLQRTLLSEMGVETQTMIGSTSTGSSVIKCKLSNRRVLLILDDVDSVKQLE 337

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVD---EVYKPHGLNYDEALQLFNMKAFKTYQ 174
           SLAG ++WFGSGS +I+T+RD  +L  H  D   + YK   LN+ E+ +LF   AF   +
Sbjct: 338 SLAGGQDWFGSGSIVIVTTRDIDVLHKHKHDIKIKTYKFEELNHHESTELFCWYAFNMSR 397

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           P++   ++S++ I YA G+PLAL+ +GS L G+S++EW   L+R    P +EI  +L+IS
Sbjct: 398 PVENFEKISSQAISYAKGIPLALKAIGSNLKGKSIEEWDIELQRYRKVPDAEIQGVLEIS 457

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLW 293
           ++GL +LE+K FLDIACFFKG   DYV    E C F PV  IRV + KCL+TV  N  + 
Sbjct: 458 YNGLSDLEQKAFLDIACFFKGERWDYVKRIQEACDFFPV--IRVFVSKCLLTVDENGCIE 515

Query: 294 MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
           MHDL+Q++G++IV+++S    G+RSRLW   +V  VL  + G+  VEGI+L     E   
Sbjct: 516 MHDLIQDMGREIVRKESTSNPGERSRLWSHHDVLGVLKGNLGSTTVEGIMLHPPKQEKVD 575

Query: 354 YLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
           +   +  AF KM NLR+L + N     G  YL N LRLL W+ YP K  P +    + ++
Sbjct: 576 HWAYN--AFQKMKNLRILIVRNTLFSFGPSYLPNSLRLLDWKWYPSKNFPPDFYPYRMVD 633

Query: 414 IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
             + +S +  L    +  + L  + LSHS+++ ++P+ +GA NL  L ++ C +L     
Sbjct: 634 FKLPHSSMI-LKNSFRIFEDLTFINLSHSQSITQIPNLSGAKNLRVLTVDKCHKLVRFEK 692

Query: 474 SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKF 533
           S      L+ L+   C+ L +   K+ + SL++L+                       KF
Sbjct: 693 SNGFLPNLVYLSASGCSELKSFVPKMYLPSLQELSFNFCK------------------KF 734

Query: 534 REFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCL 593
           + FP++++ M+   ++H+  TAI+  P SI  L GL  +++  C+ L  L  +   L  L
Sbjct: 735 KHFPQVMQKMDKPLKIHMISTAIKEFPKSIGNLKGLEYMDMSICKGLTELSSSFLLLPKL 794

Query: 594 RSLKLSGCSKL----KKFPE---IVRSMKDLSELFLDGT--SIKEVPSSIELLTKLELLN 644
            +LK+ GCS+L    ++F E   +     ++  L       S ++V + IE   KLE L 
Sbjct: 795 VTLKIDGCSQLGISFRRFKERHSVANGYPNVETLHFSEANLSYEDVNAIIENFPKLEDLK 854

Query: 645 LSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSW 704
           +S     V LP+ I     LK L++S C  L  +PE    ++ ++      +  P + S+
Sbjct: 855 VSH-NGFVALPNYIRRSLHLKNLDVSFCRNLTEIPELPSSVQKIDARHCQ-SLTPEALSF 912

Query: 705 -YSYIPINLMRKSVALKLP 722
            +S +   + R  V + +P
Sbjct: 913 LWSKVSQEIQRIQVVMPMP 931


>gi|357474625|ref|XP_003607597.1| NBS resistance protein [Medicago truncatula]
 gi|355508652|gb|AES89794.1| NBS resistance protein [Medicago truncatula]
          Length = 1278

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 255/628 (40%), Positives = 367/628 (58%), Gaps = 50/628 (7%)

Query: 1   MDSRCEKL-RFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           M+   EK+   L+     DVR++GICGMGG+GKTT+   +Y  ISH+F+A  F+D++ +I
Sbjct: 200 MNPHIEKVVNLLLLDSVDDVRVVGICGMGGIGKTTLTTALYGQISHQFDARCFIDDLSKI 259

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
               G V  Q+Q+L Q        I N+FD  D++  RL+R + L+++D+V  V+QL  L
Sbjct: 260 YRHDGQVGAQKQILHQTFGKEHFQICNLFDTDDLIRRRLRRLRALIILDNVDKVEQLDKL 319

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           A NRE+ G+GSRIII SRDEH+L  +GVDEVYK   LN   +LQLF  KAFK    +   
Sbjct: 320 ALNREYLGAGSRIIIISRDEHILNEYGVDEVYKVPLLNETNSLQLFCQKAFKLEHVMSGY 379

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            +++   + YA GLPLA++VLGSFL GR + EWRS L RL   P  +I+D+L++SF+GL+
Sbjct: 380 DKMALDTLSYANGLPLAIKVLGSFLFGRDISEWRSKLARLRECPIKDIMDVLRLSFEGLE 439

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLL 298
            +EK IFLDIACFFKG +++ VTN L   GFH  IG+R+LI+K LI++ +   + MH LL
Sbjct: 440 NMEKDIFLDIACFFKGYNKECVTNILNCRGFHADIGLRILIDKSLISISYGTNITMHSLL 499

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
            ELG++IVQ  S ++L K SRLW  E   +V+ E+     VE +V+    H  ++     
Sbjct: 500 VELGRKIVQENSTKDLRKWSRLWSLEHFNNVMLENMEKN-VEAVVI---CHPRQIKTLV- 554

Query: 359 AKAFSKMTNLRLLKIC-NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
           A+  S M++LRLL     + +   L YLSN LR   W  YP   LP + Q ++ +E+Y+ 
Sbjct: 555 AETLSSMSHLRLLIFDRGVYISGSLNYLSNELRYFKWTCYPFMCLPKSFQPNQLVELYLW 614

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
            S I +LW+G K+L  LK M L +S++LI+MP+F   PNLE+L L+GC  L +I PS+ L
Sbjct: 615 RSSIQQLWEGKKYLPNLKTMDLMYSKHLIKMPNFGEVPNLERLNLDGCVNLVQIDPSIGL 674

Query: 478 HNKLIILNMKDCTSLITLPGKIL-MKSLEKLNLKSLPTTISGLKCLSTLDVSG------- 529
             KL+ LN+K+C +LI++P  I  + SL+ LNL       +  + L+ LD S        
Sbjct: 675 LRKLVFLNLKNCKNLISIPNNIFGLTSLKYLNLSWCSKVFTNTRHLNKLDSSEIVLHSQS 734

Query: 530 ------------------------------DLKF---REFPEIVEHMEHLSELHLEGTAI 556
                                         D+ F    + P+ +  +  L  L L G   
Sbjct: 735 TTSSLYHNADKGLVSRLLSSLLSFSFLWELDISFCGLSQMPDAIGCIPWLGRLILMGNNF 794

Query: 557 RGLPLSIELLSGLVLLNLKNCRSLEILP 584
             LP S   LS LV L+L++C+ L+ LP
Sbjct: 795 VTLP-SFRELSNLVYLDLQHCKQLKFLP 821



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 128/440 (29%), Positives = 206/440 (46%), Gaps = 47/440 (10%)

Query: 590  LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDC 648
            L  L+++ L     L K P     + +L  L LDG  ++ ++  SI LL KL  LNL +C
Sbjct: 628  LPNLKTMDLMYSKHLIKMPNF-GEVPNLERLNLDGCVNLVQIDPSIGLLRKLVFLNLKNC 686

Query: 649  KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI 708
            KNL+ +P++I  L SLK LNLS C K+      L +++S E        V HS S  S +
Sbjct: 687  KNLISIPNNIFGLTSLKYLNLSWCSKVFTNTRHLNKLDSSE-------IVLHSQSTTSSL 739

Query: 709  PINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSL 768
              N  +  V+  L SL     L +L+++ C L +  +P  IG +  L  L L  N+FV+L
Sbjct: 740  YHNADKGLVSRLLSSLLSFSFLWELDISFCGLSQ--MPDAIGCIPWLGRLILMGNNFVTL 797

Query: 769  PTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIA 828
            P S   LS L+ ++L+ CK+L+ LP+LP        +   S++   +  K  K    +  
Sbjct: 798  P-SFRELSNLVYLDLQHCKQLKFLPELP------LPHSSPSVIKWDEYWK--KWGLYIFN 848

Query: 829  CLDSLKLLGNKSLAFSMLREYL--------EAVSNTRQHLSVVVPGSEIPEWFMYQNEGS 880
            C +    LG K    SM   +L        E+++  R  + +V+PGSEIP W   Q  G 
Sbjct: 849  CPE----LGEKDQYSSMTLLWLIQFVQANQESLACFRGTIGIVIPGSEIPSWLNNQCVGK 904

Query: 881  SITVTRPSNLYNKKKLVGYAICCVFHVLKN--SRGNNCFGSYPTHQLNCHIG--HGIYGI 936
            S  +     L++    +G A C VF V  +  +     FG   +   +CH      +  +
Sbjct: 905  STRIDLSPTLHD-SNFIGLACCVVFSVTFDDPTMTTKEFGPDISLVFDCHTATLEFMCPV 963

Query: 937  GFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFES-NHVNVS--FEPWLGQGLEV 993
             F        S+H WL+Y+ R +       L    + F+  +H+ ++   E   G  ++V
Sbjct: 964  IFYGDLITLESNHTWLIYVPRDS-------LSYQNKAFKDVDHITMTACLEDGNGLHVDV 1016

Query: 994  KMCGLHPVYMDEVEELDQTT 1013
            K CG   V+  ++++ + T 
Sbjct: 1017 KTCGYRYVFKQDLKQFNSTV 1036


>gi|356560719|ref|XP_003548636.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1139

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 236/578 (40%), Positives = 355/578 (61%), Gaps = 26/578 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           ++S  +++   +++ S+ V ++GI GMGGLGKTT A+ +Y+ I   F    F++++RE+ 
Sbjct: 193 LESHVQEVIGYIENQSTKVCIVGIWGMGGLGKTTTAKAIYNRIHRRFTGRCFIEDIREVC 252

Query: 60  -SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            + + G V LQ QLLS +LK   N I +V  G  M+ S+L   K L+V+DDV +  QL+ 
Sbjct: 253 ETDRRGHVHLQEQLLSDVLKTKVN-IKSVGIGRAMMESKLSGTKALIVLDDVNEFGQLKV 311

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L GNR+WFG GS +IIT+RD  LL    VD VYK   ++ +++L+LF+  AF   +P++E
Sbjct: 312 LCGNRKWFGQGSIVIITTRDVRLLHKLKVDFVYKMEEMDENKSLELFSWHAFGEAKPIEE 371

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             +L+  ++ Y GGLPLALEV+GS+LS R+  EW S L +L+I P  ++ + L+IS++GL
Sbjct: 372 FDELARNVVAYCGGLPLALEVIGSYLSERTKKEWESVLSKLKIIPNDQVQEKLRISYNGL 431

Query: 239 -QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHD 296
              +EK IFLD+ CFF G DR YVT  L GCG H  IGI VL+E+ L+ V  NN L MH 
Sbjct: 432 CDHMEKDIFLDVCCFFIGKDRAYVTEILNGCGLHADIGITVLMERSLVKVAKNNKLGMHP 491

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL+++G++I++  S ++ GKRSRLW  E+  +VLT++TGT+ +EG+ L  +    +   C
Sbjct: 492 LLRDMGREIIRESSTKKPGKRSRLWFHEDSLNVLTKNTGTKAIEGLALKLHSSSRD---C 548

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
             A AF  M  LRLL++ ++QL     YL   LR + W+G+PLK++P N  +   I I +
Sbjct: 549 FKAYAFKTMKQLRLLQLEHVQLTGDYGYLPKHLRWIYWKGFPLKYMPKNFYLGGVIAIDL 608

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             S +  +WK  + L  LK++ LSHS+ L   PDF+  P+LEKLIL+ C  L ++H S+ 
Sbjct: 609 KDSNLRLVWKDPQVLPWLKILNLSHSKYLTETPDFSKLPSLEKLILKDCPSLCKVHQSIG 668

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
               L+ +N+KDCTS                 L +LP  I  LK L TL +SG  +  + 
Sbjct: 669 DLQNLLWINLKDCTS-----------------LSNLPREIYKLKSLKTLIISGS-RIDKL 710

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL 574
            E +  ME L+ L  + TA++ +P SI  L  +  ++L
Sbjct: 711 EEDIVQMESLTTLIAKDTAVKQVPFSIVRLKSIGYISL 748



 Score = 45.4 bits (106), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 26/155 (16%)

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           +HL  ++ +G  ++ +P +   L G++ ++LK+  +L ++      L  L+ L LS    
Sbjct: 579 KHLRWIYWKGFPLKYMPKNF-YLGGVIAIDLKDS-NLRLVWKDPQVLPWLKILNLSHSKY 636

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
           L + P       D S+L          PS       LE L L DC +L ++  SI  L++
Sbjct: 637 LTETP-------DFSKL----------PS-------LEKLILKDCPSLCKVHQSIGDLQN 672

Query: 664 LKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
           L  +NL  C  L N+P  + +++SL+ L ISG+ +
Sbjct: 673 LLWINLKDCTSLSNLPREIYKLKSLKTLIISGSRI 707


>gi|147817181|emb|CAN77679.1| hypothetical protein VITISV_018104 [Vitis vinifera]
          Length = 1015

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 273/702 (38%), Positives = 366/702 (52%), Gaps = 128/702 (18%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++S   +++ L+ + S DVRM+GI GMGG+GKTT+AR VY+ ISH+FEA  FJ+NV    
Sbjct: 188 IESSIREIKSLLFTESLDVRMVGIWGMGGIGKTTLARAVYNQISHQFEACCFJENV---- 243

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
                                                      L+VIDDV + K L+ L 
Sbjct: 244 -------------------------------------------LIVIDDVNNSKILEDLI 260

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G   WFG GSRIIIT+R++ LL THGV+EVY+   LN D A++LF+  AFK   P+ + V
Sbjct: 261 GKHGWFGIGSRIIITTRNKQLLVTHGVNEVYEVEKLNDDNAVELFSRYAFKKAHPIDDYV 320

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS  I+ YA GLPLAL VL +                                      
Sbjct: 321 ELSQCIVVYAQGLPLALXVLDN-------------------------------------- 342

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            E+ IFLDIACFF+G+D+ YV      CGF P IGIRVLIEK LI+V  N L  H+LLQ+
Sbjct: 343 -ERDIFLDIACFFQGHDKXYVMEIFRSCGFFPDIGIRVLIEKSLISVVENKLMXHNLLQK 401

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G++IV+  SP+E GKRSRLW  ++V HVLT+ TGTE VEGI LD      E+    + +
Sbjct: 402 MGREIVREASPKEPGKRSRLWIHDDVNHVLTKXTGTEEVEGISLD-LSSLKEINF--TNE 458

Query: 361 AFSKMTNLRLLKI-------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
           AF+ M  LRLLK+             C +    G ++    LR L W  YPLK LP++  
Sbjct: 459 AFAPMNRLRLLKVYTLNFLMDSKREKCKVHFSXGFKFHCEELRHLYWYEYPLKSLPNDFN 518

Query: 408 MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
           +   +++ M YS+I +LWKG K L  LK M L HS+ L   PDF+   NLE+L+L+GC  
Sbjct: 519 LKNLVDLSMPYSQIKQLWKGTKVLXNLKFMNLKHSKFLTETPDFSRVTNLERLVLKGCIS 578

Query: 468 LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDV 527
           LY++HPSL    KL  L++K+C                   LKSLP+ I  LKCL    +
Sbjct: 579 LYKVHPSLGDLXKLNFLSLKNCKM-----------------LKSLPSCICDLKCLEXFIL 621

Query: 528 SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
           SG  KF E PE   ++E L E   +GTAIR LP S  LL  L +L+ + C+     P + 
Sbjct: 622 SGCSKFEELPENFGNLEMLKEFCADGTAIRVLPSSFSLLRNLEILSFEXCKG---PPPST 678

Query: 588 SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLS 646
           S     RS   S                 LS   + DG ++     S+  L+ LE L+LS
Sbjct: 679 SWWLPRRSSNFSNFVLSPLSSLSSLKTLSLSACNISDGATL----DSLGFLSSLEDLDLS 734

Query: 647 DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
           +  N V LPS+I  L  LK L L  C +L+ +PE    I S+
Sbjct: 735 E-NNFVTLPSNIXRLPHLKMLGLENCKRLQALPELPTSIRSI 775



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 150/508 (29%), Positives = 229/508 (45%), Gaps = 91/508 (17%)

Query: 542  HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
            ++++L +L +  + I+ L    ++L  L  +NLK+ + L   P   S +  L  L L GC
Sbjct: 518  NLKNLVDLSMPYSQIKQLWKGTKVLXNLKFMNLKHSKFLTETP-DFSRVTNLERLVLKGC 576

Query: 602  SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
              L K                       V  S+  L KL  L+L +CK L  LPS I  L
Sbjct: 577  ISLYK-----------------------VHPSLGDLXKLNFLSLKNCKMLKSLPSCICDL 613

Query: 662  KSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYIPINLMRKSVA 718
            K L+   LSGC K E +PE  G +E L+E    GTA+   P S S    + I L  +   
Sbjct: 614  KCLEXFILSGCSKFEELPENFGNLEMLKEFCADGTAIRVLPSSFSLLRNLEI-LSFEXCK 672

Query: 719  LKLPSLSGLCSLRKLNLTD-------------------CNLMEGALPSDIGNLCSLKELY 759
               PS S     R  N ++                   CN+ +GA    +G L SL++L 
Sbjct: 673  GPPPSTSWWLPRRSSNFSNFVLSPLSSLSSLKTLSLSACNISDGATLDSLGFLSSLEDLD 732

Query: 760  LSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKL 819
            LS+N+FV+LP++I  L  L  + LE+CKRLQ+LP+LP +IR +    C SL T+      
Sbjct: 733  LSENNFVTLPSNIXRLPHLKMLGLENCKRLQALPELPTSIRSIMARNCTSLETI------ 786

Query: 820  CKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEG 879
              S+ +  + L +++L   + +   + R+ L   +     LS V  GS IP+W  YQ+ G
Sbjct: 787  --SNQSFSSLLMTVRL--KEHIYCPINRDGLLVPA-----LSAVXFGSRIPDWIRYQSSG 837

Query: 880  SSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGH-------- 931
            S +    P N ++    +G A+C V  V +     + FG +     +C + +        
Sbjct: 838  SEVKAELPPNWFDSN-FLGLALCVV-TVPRLVSLADFFGLF---WRSCTLFYSTSSHXSS 892

Query: 932  --GIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQ 989
               +Y      K G+  SDHLWL+Y          +PL   +   +  H+  SF      
Sbjct: 893  SFDVYTYPNHLK-GKVESDHLWLVY----------VPLPHFINWQQVTHIKASFRITTFM 941

Query: 990  GLEV-KMCGLHPVYMDEVEELDQTTNQP 1016
             L V K CG+  VY++  EEL+ +   P
Sbjct: 942  RLNVIKECGIGLVYVN--EELNYSXFSP 967


>gi|357486941|ref|XP_003613758.1| Disease resistance-like protein [Medicago truncatula]
 gi|355515093|gb|AES96716.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1095

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 263/702 (37%), Positives = 406/702 (57%), Gaps = 50/702 (7%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR +K+  L++  S++ VRM+GI GMGGLGKTT+A  VY+ I+ +F++  FL ++RE 
Sbjct: 200 LESRVQKVNSLLEVESNEGVRMVGIYGMGGLGKTTLACAVYNCIADQFDSLCFLGDIREN 259

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S K GLV LQ  LL +L    D  + ++   I ++ SRL+ +K+LL++DD+  ++QL++L
Sbjct: 260 SKKRGLVELQDMLLFELTGEKDIKLCSLNKAIPIIESRLRGRKILLILDDIDSLEQLKAL 319

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  EWFGSGSR+IIT+RD+HLL+ +GV+ VY+  GL ++EAL+LF   AFK+ +     
Sbjct: 320 AGGLEWFGSGSRVIITTRDKHLLQVYGVERVYEVEGLKHEEALELFVWNAFKSKEVEPSY 379

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             ++ +++ Y+ GLPLA+E++GS L G+++ EW+S ++  E  P   I DIL++S+DGL+
Sbjct: 380 FDIAKKVLLYSKGLPLAIEIIGSDLYGKTILEWQSAIDTYERIPHENIQDILRVSYDGLK 439

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLE-GCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
           E EK+IFLDI CFFKG     V N L  G G+ P   ++VLI+K LI ++   + +HD++
Sbjct: 440 EFEKEIFLDITCFFKGYKLSDVMNILHSGRGYAPDYAVQVLIDKSLIKMNEYRVRIHDMI 499

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           +++G++IV+ +SP + G RSRLW  +++ HVL E+ G++  E IVL N   + EV     
Sbjct: 500 EDMGREIVRLESPSKPGGRSRLWFTKDILHVLKENKGSDKTEIIVL-NLLKDKEVQW--D 556

Query: 359 AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
             A   M NL++L I   +   G  +L   LR+L W  YP   LP++    K + + +  
Sbjct: 557 GNALKNMENLKILVIEKTRFSRGPNHLPKSLRVLKWFDYPESSLPAHYNPKKLVILDLSD 616

Query: 419 SRIGELWKG---IKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           S  G    G   I     LK M +S  ++L ++PD +GAPNL+KL L+ C  L E+H S+
Sbjct: 617 S-TGLFTFGNQMIMKFKSLKEMKISKCQSLKKVPDMSGAPNLKKLHLDSCKSLVEVHDSI 675

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
               KL  LN+  CTSL  LP  I + SL+ ++L++  T                   + 
Sbjct: 676 GFLEKLEDLNLNYCTSLTILPYGINLPSLKTMSLRNCTTV------------------KN 717

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
           FPEI+  ME++  L L  + I  LP SI LL GLV L +  C  L  LP ++  L  L +
Sbjct: 718 FPEILGKMENIKYLVLSNSEISELPYSIGLLVGLVNLTIDRCNKLLELPSSIFMLPKLET 777

Query: 596 LKLSGC---SKLKK--------FPEIVRSMK--------DLSELFLDGTSIKEVPSSIEL 636
           L+   C   +++KK         P  VR+          DLS  +L    +  +   +  
Sbjct: 778 LEAYCCRGLARIKKRKGQVPETLPSDVRNASSCLVHRDVDLSFCYLPYEFLATLLPFLHY 837

Query: 637 LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
           +T + L    D  ++  LPSSI A  SL  L ++ C +L  +
Sbjct: 838 VTNISL----DYSSITILPSSINACYSLMKLTMNNCTELREI 875



 Score =  119 bits (298), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 134/513 (26%), Positives = 217/513 (42%), Gaps = 97/513 (18%)

Query: 399 LKFLPSNLQMDKTIEIYMCYSRIGEL-WKG--IKHLDKLKVMILSHSENLIRMPDFTGAP 455
           L  L  N   DKT  I +   +  E+ W G  +K+++ LK++++  +        F+  P
Sbjct: 528 LHVLKENKGSDKTEIIVLNLLKDKEVQWDGNALKNMENLKILVIEKTR-------FSRGP 580

Query: 456 NLEKLILEGCTRLYEIHPSLLLH---NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSL 512
           N     L           SL  H    KL+IL++ D T L T   +++MK          
Sbjct: 581 NHLPKSLRVLKWFDYPESSLPAHYNPKKLVILDLSDSTGLFTFGNQMIMK---------- 630

Query: 513 PTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVL 571
                  K L  + +S     ++ P++     +L +LHL+   ++  +  SI  L  L  
Sbjct: 631 ------FKSLKEMKISKCQSLKKVPDM-SGAPNLKKLHLDSCKSLVEVHDSIGFLEKLED 683

Query: 572 LNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP 631
           LNL  C SL ILP  + NL  L+++ L  C+ +K FPEI+  M+++  L L  + I E+P
Sbjct: 684 LNLNYCTSLTILPYGI-NLPSLKTMSLRNCTTVKNFPEILGKMENIKYLVLSNSEISELP 742

Query: 632 SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
            SI LL  L  L +  C  L+ LPSSI  L  L+TL    C  L  + +  GQ       
Sbjct: 743 YSIGLLVGLVNLTIDRCNKLLELPSSIFMLPKLETLEAYCCRGLARIKKRKGQ------- 795

Query: 692 DISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGN 751
                 VP +      +P ++   S  L           R ++L+ C L    L + +  
Sbjct: 796 ------VPET------LPSDVRNASSCL---------VHRDVDLSFCYLPYEFLATLLPF 834

Query: 752 LCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLV 811
           L  +  + L  +S   LP+SI     L+ + + +C  L+ +  LPPNI+ +    C SL 
Sbjct: 835 LHYVTNISLDYSSITILPSSINACYSLMKLTMNNCTELREIRGLPPNIKHLGAINCESLT 894

Query: 812 TLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPE 871
           +                   S ++L N+ L  S ++              ++ PGS IP 
Sbjct: 895 S------------------QSKEMLLNQMLLNSGIK-------------YIIYPGSSIPS 923

Query: 872 WFMYQNEGSSITVTRPSNLYNKKKLVGYAICCV 904
           WF  +      T  +  + + + KL   A+C V
Sbjct: 924 WFHQR------TCEQSQSFWFRNKLPEMALCLV 950


>gi|357469153|ref|XP_003604861.1| Nbs-lrr resistance protein [Medicago truncatula]
 gi|355505916|gb|AES87058.1| Nbs-lrr resistance protein [Medicago truncatula]
          Length = 1897

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 241/603 (39%), Positives = 351/603 (58%), Gaps = 60/603 (9%)

Query: 1    MDSRCEKLRFLMD-SGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            ++SR + +  L++   S DV ++GI GMGG+GKTTIA+ +Y+ I  +F+   FL N+RE 
Sbjct: 723  VESRVDAVTKLLNIQNSEDVLLLGIWGMGGVGKTTIAKAIYNQIGRKFDGRSFLLNIREF 782

Query: 60   -SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
              +    VSLQ+Q+L  + K     I ++  G ++L  RL + +VLLV+DDV ++ QL++
Sbjct: 783  CETDANHVSLQQQILCDVYKTTAFKIRDIESGKNILKERLAQNRVLLVLDDVNELDQLKA 842

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            L G+REWFG GSRIIIT+RD HLL++  VD VY    ++  E+L+LF+  AFK   P + 
Sbjct: 843  LCGSREWFGPGSRIIITTRDMHLLRSSRVDLVYTIEEMDESESLELFSWHAFKQPSPAEG 902

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
                S  +I Y+G LPLALEVLG +LS   + EW+  LE+L+  P  E+   L++SFDGL
Sbjct: 903  FATHSTDVIAYSGRLPLALEVLGCYLSDCEITEWQKVLEKLKCIPHDEVQKKLKVSFDGL 962

Query: 239  QEL-EKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHD 296
            +++ E++IFLDIACF  G D++     L GCGF   IGI+VL+E+ L+TV N N L MHD
Sbjct: 963  KDVTEQQIFLDIACFLIGMDKNDAIKILNGCGFFADIGIKVLVERSLVTVDNRNKLRMHD 1022

Query: 297  LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
            LL+++G+QI+  +SP +   RSRLW+ EEV  VL +  GTE V+G+ L  +  +N+V  C
Sbjct: 1023 LLRDMGRQIIYEESPFDPENRSRLWRREEVYDVLLKQKGTEAVKGLAL-VFPRKNKV--C 1079

Query: 357  ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
             + KAF KM  LRLL++  +QL    +YLS  LR L W G+PL + P+  Q    I I +
Sbjct: 1080 LNTKAFKKMNKLRLLQLSGVQLNGDFKYLSGELRWLYWHGFPLTYTPAEFQQGSLIVIQL 1139

Query: 417  CYSRIGELWK------------------------------------GIKHLDKLKVMILS 440
             YS + ++WK                                      + L  LK++ LS
Sbjct: 1140 KYSNLKQIWKEGQDVPTCDGMGGVEGPPSPHVVGSLVASEVLEVPPASRMLKNLKILNLS 1199

Query: 441  HSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKIL 500
            HS +L   PDF+  PNLEKL+L+ C  L  +  S+   +KL+++N+ DC           
Sbjct: 1200 HSLDLTETPDFSYMPNLEKLVLKDCPSLSTVSHSIGSLHKLLLINLTDC----------- 1248

Query: 501  MKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLP 560
                  + L+ LP +I  LK L TL +SG     +  E +E ME L+ L  + TAI  +P
Sbjct: 1249 ------IRLRKLPRSIYKLKSLETLILSGCSMIDKLEEDLEQMESLTTLIADKTAITKVP 1302

Query: 561  LSI 563
             SI
Sbjct: 1303 FSI 1305



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 125/283 (44%), Positives = 175/283 (61%), Gaps = 4/283 (1%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVREI-SSKGGLVSLQRQLLSQLLKLADNSIWNVFDG 90
           K+TIA+ +YD +   FE    L NVR      GG VSLQ++LL  + K  +  I ++  G
Sbjct: 252 KSTIAQAIYDQVGPYFEHKSLLKNVRTFWQQNGGQVSLQKKLLMAVNKTTEKKILHIESG 311

Query: 91  IDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEV 150
             +L  RL+ K VLL++DDV  ++QL+SL GNR+WFG GS+III +RD HLL  HGVD +
Sbjct: 312 KVILKERLRHKSVLLILDDVNKLEQLKSLCGNRDWFGPGSKIIIITRDRHLLMEHGVDHI 371

Query: 151 YKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVD 210
           YK   L   E+++LFN  AF      Q   +LS +++ Y+ GLPLAL+ LG FL G+   
Sbjct: 372 YKVKQLEESESIELFNWGAFSQATTPQGFSELSRQLVAYSKGLPLALKALGEFLHGKDAL 431

Query: 211 EWRSTLERLE--IEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGC 268
           EW+  L+ LE    P  E+L  L+ SFD L++ EK IFLDIACFF G D++YV   +   
Sbjct: 432 EWKRVLKSLERFSFPDQEVLQALETSFDDLKDEEKHIFLDIACFFNGMDQNYVLRTINRS 491

Query: 269 GFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELGQQIVQRQS 310
                + I +L +K L+T+  NN L MH LLQ + + I++R+S
Sbjct: 492 TQCTSLQISLLEDKSLLTIGENNKLEMHGLLQAMARDIIKRES 534


>gi|237770135|gb|ACR19031.1| TIR-NBS-LRR-type disease resistance-like protein [Pyrus x
           bretschneideri]
          Length = 1053

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 249/639 (38%), Positives = 366/639 (57%), Gaps = 16/639 (2%)

Query: 1   MDSRCEKL-RFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +DSR + +   L   G SDV+ +GI GMGGLGKTT A  +YD I H F+   +L +V + 
Sbjct: 203 IDSRVQPIINDLFSGGLSDVKRVGIWGMGGLGKTTAANAIYDKIHHGFQFKCYLGDVSDT 262

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
             + GLV LQ QL+S +LK     I +V +GI ++  RL+R+KVL+V+D+V  V+QL+++
Sbjct: 263 ERRCGLVHLQEQLVSSILKRT-TRINSVGEGISVIKERLRRRKVLIVVDNVDKVEQLRAI 321

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG+REWFG GS IIIT+RDEHLL    V+  Y    +N +EAL+LF+   F+   P +E 
Sbjct: 322 AGDREWFGPGSIIIITTRDEHLLNQVRVNLRYPAGEMNEEEALELFSWHTFENNCPKEEY 381

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           ++LS +++ Y GGLPLAL+VLGS L GR + EW+S LE+L+  P  EI++ L+ISFDGL 
Sbjct: 382 LELSKKVVSYCGGLPLALKVLGSSLFGRPITEWQSYLEKLKRIPEGEIIEKLKISFDGLD 441

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
             +K IFL I C F G  +D+VT  L+ C  H  I I VL E+CLITV    L MHDL+Q
Sbjct: 442 YNQKTIFLHIFCCFLGMRKDHVTKILDECDLHATIDICVLRERCLITVEWGVLKMHDLIQ 501

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G+ I+  +SP + G+ SR W  E +  VLT  +GTE +E + L     E +       
Sbjct: 502 EMGKTIISEKSPTQPGRWSRPWNLEAITDVLTNKSGTEEIEALSLHLPSSEKKASF--RT 559

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSN-LQMDKTIEIYMCY 418
           KAF  M  L  L++  ++L    ++    LR L W G+P K++P + L   K + + + +
Sbjct: 560 KAFVNMKKLGFLRLSYVELAGSFKHFPKELRWLCWHGFPFKYMPEHLLNQPKLVALDLSF 619

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           S + + WK  K L+ LK++  SHSE L + PDF+  PNLE+L    C  L +IHPS+   
Sbjct: 620 SNLRKGWKNSKPLENLKILDFSHSEKLKKSPDFSRLPNLEELNFSSCDSLSKIHPSIGQL 679

Query: 479 NKLIILNMKDCTSLITLPGKIL-MKSLEKL-----NLKSLPTTISGLKCLSTLDVSGDLK 532
            KL  +N   C  L  LP +   +KS++ L     +L+ LP  +  +  L  LD +  + 
Sbjct: 680 KKLTWVNFDRCYKLRYLPAEFYKLKSVKNLSLMDCSLRELPEGLGDMVSLRKLD-ADQIA 738

Query: 533 FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKC 592
            ++FP  +  +  L  L +       LP S+  LS LV L +  CR L  +P   +NL+ 
Sbjct: 739 IKQFPNDLGRLISLRVLTVGSYDCCNLP-SLIGLSNLVTLTVYRCRCLRAIPDLPTNLED 797

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP 631
             + +   C  L+  P+  + +     L      + EVP
Sbjct: 798 FIAFR---CLALETMPDFSQLLNMRQLLLCFSPKVTEVP 833



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 104/427 (24%), Positives = 171/427 (40%), Gaps = 86/427 (20%)

Query: 507 LNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELL 566
           +N+K L     G   LS ++++G   F+ FP+       L  L   G   + +P  +   
Sbjct: 563 VNMKKL-----GFLRLSYVELAGS--FKHFPK------ELRWLCWHGFPFKYMPEHLLNQ 609

Query: 567 SGLVLLNLKNCRSLEILPVTVSNLKCLRSLKL---SGCSKLKKFPEIVRSMKDLSELFLD 623
             LV L+L    S   L     N K L +LK+   S   KLKK P+  R           
Sbjct: 610 PKLVALDL----SFSNLRKGWKNSKPLENLKILDFSHSEKLKKSPDFSR----------- 654

Query: 624 GTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLG 683
                        L  LE LN S C +L ++  SI  LK L  +N   C+KL  +P    
Sbjct: 655 -------------LPNLEELNFSSCDSLSKIHPSIGQLKKLTWVNFDRCYKLRYLPAEFY 701

Query: 684 QIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEG 743
           +++S++ L                   +LM  S+      L  + SLRKL+     + + 
Sbjct: 702 KLKSVKNL-------------------SLMDCSLRELPEGLGDMVSLRKLDADQIAIKQ- 741

Query: 744 ALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR 803
             P+D+G L SL+ L +      +LP S+  LS L+ + +  C+ L+++P LP N+    
Sbjct: 742 -FPNDLGRLISLRVLTVGSYDCCNLP-SLIGLSNLVTLTVYRCRCLRAIPDLPTNLEDFI 799

Query: 804 VNGCASLVTLLDALKLCKSDSTMIAC---LDSLKLLGNKSLAFSMLREYLEAVSN-TRQH 859
              C +L T+ D  +L      ++     +  +  LG      SM+   +   +N T + 
Sbjct: 800 AFRCLALETMPDFSQLLNMRQLLLCFSPKVTEVPGLGLGKSLNSMVDLSMNWCTNLTAEF 859

Query: 860 LSVVVPG--------------SEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
              ++ G                IPEWF +  +G+ ++   P    + +   G  +C V 
Sbjct: 860 RKNILQGWTSCGVGGISLDKIHGIPEWFDFVADGNKVSFDVPQ--CDGRNFKGLTLCWVG 917

Query: 906 HVLKNSR 912
               N R
Sbjct: 918 LQFPNKR 924


>gi|296090591|emb|CBI40960.3| unnamed protein product [Vitis vinifera]
          Length = 771

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 286/728 (39%), Positives = 392/728 (53%), Gaps = 99/728 (13%)

Query: 382  LEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSH 441
             E+ SN+LR L W  YPLK LPSN      +E+ +C   + ELWKG+KH++KL+ + LSH
Sbjct: 35   FEFPSNKLRYLYWHRYPLKSLPSNFHPKNLVELNLCCCYVEELWKGVKHMEKLECIDLSH 94

Query: 442  SENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILM 501
            S+ L+R PDF+G PNLE+LI EGCT L E+H SL + +KLI LN+KDC +L   P  I +
Sbjct: 95   SQYLVRTPDFSGIPNLERLIFEGCTDLREVHQSLGVLSKLIFLNLKDCKNLQCFPSSIEL 154

Query: 502  KSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPL 561
            +SL+                   L +SG  K  +FPEI+ ++ +L ELHL GTAI  LP 
Sbjct: 155  ESLK------------------VLILSGCSKLDKFPEILGYLPNLLELHLNGTAITELPS 196

Query: 562  SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
            SI   + LV L++++C+  + LP  +  LK L+ LKLSGC+K + FPEI+ +M+ L ELF
Sbjct: 197  SIGYATQLVSLDMEDCKRFKSLPCCIYKLKSLKILKLSGCAKFESFPEILENMEGLRELF 256

Query: 622  LDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPET 681
            LDGT+IKE+P S+E L  L LLNL +C+ L+ LPSSI  LKSL TL LSGC +LE +PE 
Sbjct: 257  LDGTAIKELPLSVEHLNGLVLLNLRNCERLITLPSSICNLKSLSTLTLSGCSQLEKLPEN 316

Query: 682  LGQIESLEELDISGTAVPH-----------------------STSW----YSYIPINLMR 714
            LG +E L EL   G+AV                         S+ W    +S + +  + 
Sbjct: 317  LGNLECLVELVADGSAVIQPPSSIVLLRNLKVLSFQGCNGSPSSRWNSRFWSMLCLRRIS 376

Query: 715  KSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGN-LCSLKELYLSKNSFVSLPTSIT 773
             S   +LPSLSGLCSL++LNL+DCN+ EGALP+D+G  L SL+ L L  N FV+LPT I+
Sbjct: 377  DSTGFRLPSLSGLCSLKQLNLSDCNIKEGALPNDLGGYLSSLEYLNLKGNDFVTLPTGIS 436

Query: 774  HLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSL 833
             L  L  + L  CKRLQ LP LPPNI ++    C SL TL      C      +A  +S 
Sbjct: 437  KLCNLKALYLGCCKRLQELPMLPPNINRINAQNCTSLETLSGLSAPC-----WLAFTNSF 491

Query: 834  KLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNK 893
            +    +         YL  VS   +  +  +PG+ IPEWF  Q  G SI V  PS+ YN 
Sbjct: 492  RQNWGQ-------ETYLAEVSRIPK-FNTYLPGNGIPEWFRNQCMGDSIMVQLPSHWYN- 542

Query: 894  KKLVGYAICCVFHVLKNSRGNNC----------FGSYPTHQLNCHIGHGIYGIGFRDKFG 943
               +G+A+C VF +      N C                  L C + H ++  G  D  G
Sbjct: 543  DNFLGFAMCIVFAL---KEPNQCSRGAMLCELESSDLDPSNLGCFLDHIVWE-GHSDGDG 598

Query: 944  QAGSDHLWLLYLSRQTCYDIRLPLESN--LEPFESNHVNVSFEPWLGQGLEVKMCGLHPV 1001
               SDHLWL        Y    P++ +    P + +H+  SF    G   EVK CG   V
Sbjct: 599  FVESDHLWL-------GYHPNFPIKKDDMDWPNKLSHIKASFV-IAGIPHEVKWCGFRLV 650

Query: 1002 YM----DEVEELDQTTNQPSRFTVYNLNEFDQHFVGSKMIVATTSKRSLTEYF--GAEAS 1055
            YM    D+  ++ + +  P + +V  L + D+         AT       EY+  G   S
Sbjct: 651  YMEDLNDDNSKITKYSPLPKKSSVV-LQDLDES--------ATKDTIIHDEYYNSGGGPS 701

Query: 1056 GSGCCDDE 1063
            GS C +++
Sbjct: 702  GSPCSNED 709


>gi|357469545|ref|XP_003605057.1| TMV resistance protein N [Medicago truncatula]
 gi|355506112|gb|AES87254.1| TMV resistance protein N [Medicago truncatula]
          Length = 1626

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 232/571 (40%), Positives = 347/571 (60%), Gaps = 24/571 (4%)

Query: 8    LRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI-SSKGGLV 66
            ++ L    S D +++GI GMGG+GKTT+A+ VY+ I H+F+A  FL NVR++       V
Sbjct: 706  IQLLSRQKSKDPQLLGIWGMGGIGKTTLAKAVYNKIRHDFDAKSFLFNVRDVWKVDDDKV 765

Query: 67   SLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWF 126
            SLQ++LL  + K     I +V  G  +L  RL  KK+ LVIDDV  + QL +L G+R+WF
Sbjct: 766  SLQQRLLFDICKTTKIKIDSVESGKKILQERLCSKKIFLVIDDVNKLDQLNALCGDRKWF 825

Query: 127  GSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARI 186
            G GSRI+IT+RD+ LL    VD VY+   ++  E+L+LFN  AFK     +    +S  +
Sbjct: 826  GKGSRILITTRDDDLLSRLEVDHVYRMKEMDSSESLELFNWHAFKQSTSREGFTNISRDV 885

Query: 187  IRYAGGLPLALEVLGSFLSGRSVD-EWRSTLERLEIEPPSEILDILQISFDGLQELE-KK 244
            ++Y+GGLPLAL+V+GSFLS + +  EW+  LE+L++ P +E+L+ L+ISFDGL + + K 
Sbjct: 886  VKYSGGLPLALQVIGSFLSTKKIKAEWKDVLEKLKLIPNNEVLEKLRISFDGLSDDDVKD 945

Query: 245  IFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELGQ 303
            IFLDIA FF G DR+ VT  L+ CG   VIGI VL+++ L+TV   N + MHDLL+++G+
Sbjct: 946  IFLDIAFFFIGMDREDVTKILQDCGHFSVIGISVLVQQSLVTVDRKNKIGMHDLLRDMGR 1005

Query: 304  QIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFS 363
            +IV++ S +   + SRLW  E+V H L   T +  V+G+ L     ++  YL    KAF 
Sbjct: 1006 EIVRKISKDADKEPSRLWHYEDV-HKLPIDTSSLAVKGLSLKMSRMDSTTYL--ETKAFE 1062

Query: 364  KMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGE 423
            KM  LR L++  +QL    +YLS  LR L W G+PLK++P++   D  + + + YS +  
Sbjct: 1063 KMDKLRFLQLVGIQLNGDYKYLSRHLRWLSWHGFPLKYIPADFHQDTLVAVVLKYSNLER 1122

Query: 424  LWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLII 483
            +W+  + L KLK++ LSHS NL   PDF+  PNLEKLIL+ C  L  +  ++    K+++
Sbjct: 1123 VWRKSQFLVKLKILNLSHSHNLRHTPDFSKLPNLEKLILKDCPSLSSVSSNIGHLKKILL 1182

Query: 484  LNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHM 543
            +N+KDCT                  L+ LP +I  L  L TL +SG  K  +  E +E M
Sbjct: 1183 INLKDCTG-----------------LRELPRSIYKLDSLKTLILSGCTKIDKLEEDIEQM 1225

Query: 544  EHLSELHLEGTAIRGLPLSIELLSGLVLLNL 574
            + L+ L  + TAI  +P ++     +  ++L
Sbjct: 1226 KSLTTLVADDTAITRVPFAVVRSKSIAFISL 1256



 Score =  215 bits (548), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 124/314 (39%), Positives = 187/314 (59%), Gaps = 4/314 (1%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMI-GICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +++R + +  L++S  ++  MI GI GM G+GKT IA+  Y+ +S  F+    L NV E 
Sbjct: 197 VEARVKDVIQLLNSEQAENTMIVGIWGMAGVGKTIIAKATYNQMSFTFDCKSILKNVNET 256

Query: 60  SSKG--GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
              G  GLVS QRQLL  + K     I  V  G  +L   L  KKV LV+D V  ++QL 
Sbjct: 257 CKSGDDGLVSFQRQLLLDICKTTKIHIDTVESGKKILQRSLCHKKVFLVLDGVNKLEQLN 316

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
           +L G+R+WFG GSRI+IT+ D+H+L+   +D VY+   ++  E+L+LF+  AF+T  P +
Sbjct: 317 ALCGDRDWFGHGSRIVITTSDKHILRNLQLDHVYRMKYMDNTESLKLFSWHAFRTPSPKE 376

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
               L   ++ Y GGLP+ALE+LGS+L  RSV EW+  L++ +   P +I   L+ + D 
Sbjct: 377 SYADLCRDVVEYCGGLPVALEILGSYLFDRSVQEWKIALQKFKTILPYQIEKKLRKNLDV 436

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHD 296
           L    + +FL IA  F G  +D V   L   G  P I I +L +K L+T+  NN + MH 
Sbjct: 437 LDHDNQDVFLKIATLFIGMHKDDVIQTLNYSGHFPEIAISILEDKSLLTIDGNNRIGMHT 496

Query: 297 LLQELGQQIVQRQS 310
           LL+ +G++I+++QS
Sbjct: 497 LLRAMGREIIRQQS 510



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 171/413 (41%), Gaps = 77/413 (18%)

Query: 545  HLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKL 604
            HL  L   G  ++ +P        LV + LK   +LE +      L  L+ L LS    L
Sbjct: 1087 HLRWLSWHGFPLKYIPADFHQ-DTLVAVVLKYS-NLERVWRKSQFLVKLKILNLSHSHNL 1144

Query: 605  KKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
            +  P+  + + +L +L L D  S+  V S+I  L K+ L+NL DC  L  LP SI  L S
Sbjct: 1145 RHTPDFSK-LPNLEKLILKDCPSLSSVSSNIGHLKKILLINLKDCTGLRELPRSIYKLDS 1203

Query: 664  LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMR-KSVAL--- 719
            LKTL LSGC K++ + E + Q++SL  L    TA+       + +P  ++R KS+A    
Sbjct: 1204 LKTLILSGCTKIDKLEEDIEQMKSLTTLVADDTAI-------TRVPFAVVRSKSIAFISL 1256

Query: 720  ---KLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLC----------------------S 754
               K  +     S+ +  L+  N +   + +  G LC                      +
Sbjct: 1257 CGYKGSARRVFPSIIQSWLSPTNNILSLVQTSAGTLCRDFIDEQNNSFYCLSSILEDLQN 1316

Query: 755  LKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLL 814
             + L++  +S   L  ++   S L +   ++C+   ++     N R+ +V  C S     
Sbjct: 1317 TQRLWVKCDSQAQLNQTVA--SILYSFNTQNCEGFSNIETSASNFRRTQV--CIS----- 1367

Query: 815  DALKLCKSDSTMIACLDSLKLLGNKSLAFSMLRE-YLEAVSNTRQHLSVVVPGSEIPEWF 873
                     S+  +    L  +G      ++LRE  L+ +  T   L   +PG   P+W 
Sbjct: 1368 ---------SSKNSVTSLLIEMGVSCDVANILRENILQKMPPTGSGL---LPGDNYPDWL 1415

Query: 874  MYQNEGSSITVTRP---------------SNLYNKKKLVGYAICCVFHVLKNS 911
             + +  SS+T   P               S+  +    VG+ +  V +  KN+
Sbjct: 1416 TFNSNSSSVTFEVPQVDGRSLKTIMCIAYSSSLDNTTTVGFKVVLVINCTKNT 1468


>gi|356560717|ref|XP_003548635.1| PREDICTED: TMV resistance protein N-like, partial [Glycine max]
          Length = 1055

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 233/578 (40%), Positives = 358/578 (61%), Gaps = 25/578 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           ++S  +++   +++ S+ V ++GI GMGGLGKTT A+ +Y+ I   F    F++++RE+ 
Sbjct: 167 LESHVQEVIGYIENQSTKVCIVGIWGMGGLGKTTTAKAIYNRIHRRFMGRCFIEDIREVC 226

Query: 60  -SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            + + G + LQ QLLS +LK   N I +V  G  M+ S+L R+K L+V+DDV++  QL+ 
Sbjct: 227 ETDRRGHLHLQEQLLSNVLKTKVN-IQSVGIGRAMIESKLSRRKALIVLDDVIEFGQLKV 285

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L GNR+WFG GS +IIT+RD  LL    VD VYK   ++ +++L+LF+  AF   +P +E
Sbjct: 286 LCGNRKWFGQGSIVIITTRDVRLLHKLKVDFVYKMEEMDENKSLELFSWHAFGEAKPTEE 345

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             +L+  ++ Y GGLPLALEV+GS+LS R   EW S L +L+I P  ++ + L+IS++GL
Sbjct: 346 FDELARNVVAYCGGLPLALEVIGSYLSERRKKEWESVLSKLKIIPNDQVQEKLRISYNGL 405

Query: 239 QE-LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHD 296
            + +EK IFLDI CFF G DR YVT  L GCG H  IGI VL+E+ L+ V  NN L MH 
Sbjct: 406 GDHMEKDIFLDICCFFIGKDRAYVTEILNGCGLHADIGITVLMERSLVKVAKNNKLEMHP 465

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           L++++ ++I++  S ++ GKRSRLW +E+  +VLT++TGT+ +EG+ L  +    +   C
Sbjct: 466 LIRDMDREIIRESSTKKPGKRSRLWFQEDSLNVLTKNTGTKAIEGLALKLHSSSRD---C 522

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
             A AF  M  LRLL++ +++L     YL   LR + W+ +PLK++P N  +   I I +
Sbjct: 523 FKAYAFKTMDQLRLLQLEHVELTGDYGYLPKHLRWIYWKRFPLKYMPKNFFLGGVIAIDL 582

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
            +S +  +WK  + L  LK++ LSHS+ L   PDF+  P+LEKLIL+ C  L ++H S+ 
Sbjct: 583 KHSNLRLVWKEPQVLPWLKILNLSHSKYLTETPDFSNLPSLEKLILKDCPSLCKVHQSIG 642

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
               L+++N+KDCTS                 L +LP  I  LK L TL +SG  K  + 
Sbjct: 643 DLQNLLLINLKDCTS-----------------LSNLPREIYKLKSLETLILSGCSKIDKL 685

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL 574
            E +  ME+L+ L  + TA++ +  SI  L  +  ++L
Sbjct: 686 EEDIVQMEYLTTLIAKNTAVKQVSFSIVRLKSIEYISL 723



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 85/156 (54%), Gaps = 4/156 (2%)

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           +HL  ++ +   ++ +P +   L G++ ++LK+  +L ++      L  L+ L LS    
Sbjct: 553 KHLRWIYWKRFPLKYMPKNF-FLGGVIAIDLKHS-NLRLVWKEPQVLPWLKILNLSHSKY 610

Query: 604 LKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
           L + P+   ++  L +L L D  S+ +V  SI  L  L L+NL DC +L  LP  I  LK
Sbjct: 611 LTETPDF-SNLPSLEKLILKDCPSLCKVHQSIGDLQNLLLINLKDCTSLSNLPREIYKLK 669

Query: 663 SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
           SL+TL LSGC K++ + E + Q+E L  L    TAV
Sbjct: 670 SLETLILSGCSKIDKLEEDIVQMEYLTTLIAKNTAV 705


>gi|93117597|gb|ABE99701.1| TIR-NBS-LRR disease resistance-like protein [Populus balsamifera]
          Length = 1116

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 258/666 (38%), Positives = 391/666 (58%), Gaps = 25/666 (3%)

Query: 11  LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKG-GLVSLQ 69
            + + + +V ++GI GM G+GKT+IA+VV++   + FE S FL N+ E S +  GLV LQ
Sbjct: 241 FLSTATDEVCIVGIHGMPGIGKTSIAKVVFNQFCYRFEGSCFLSNINETSEQSNGLVLLQ 300

Query: 70  RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG 129
            QLL  +LK    +I NV  G+ ++  R+  K+VL+V+DDV    QL +L G R WFG G
Sbjct: 301 EQLLHDILKQNTVNISNVVRGMVLIKERICHKRVLVVVDDVAHQNQLNALMGERSWFGPG 360

Query: 130 SRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRY 189
           SR+IIT++DEHLL    VD  Y+   L  DE+LQLF+  AF   +P ++ V+LS  ++ Y
Sbjct: 361 SRVIITTKDEHLLLK--VDRTYRVEELKRDESLQLFSWHAFGDTKPAKDYVELSNDVVDY 418

Query: 190 AGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELE-KKIFLD 248
            GGLPLALEVLGS L G++   W+  +++L   P  EI   L+ISFD L + + +  FLD
Sbjct: 419 CGGLPLALEVLGSCLPGKNRARWKCLIDKLRKIPNREIQKKLRISFDSLDDHQLQNTFLD 478

Query: 249 IACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQELGQQIV 306
           IACFF G +++YV   LE  CG++P   +  L E+ LI V     + MHDLL+++G+ I+
Sbjct: 479 IACFFIGRNKEYVAKVLEARCGYNPEDDLGTLSERSLIKVDAFGKISMHDLLRDMGRDII 538

Query: 307 QRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMT 366
            ++SP   GKRSR+W+ E+  +VL +  GTE+VEG+ LD    E++     S  +F+KM 
Sbjct: 539 HKESPGHPGKRSRIWQREDAWNVLNKHMGTEVVEGLALDARASEDK---SLSTGSFTKMR 595

Query: 367 NLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWK 426
            L+LL+I  + L    + LS  L  + W   PLK  PS+L +D  + + M YS I ELWK
Sbjct: 596 FLKLLQINGVHLTGPFKLLSEELIWICWLECPLKSFPSDLMLDNLVVLDMQYSNIKELWK 655

Query: 427 GIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNM 486
             K L+KLK++  SHS++LI+ P+   + +LEKL+LEGC+ L E+H S+     L++LN+
Sbjct: 656 EKKILNKLKILNFSHSKHLIKTPNLHSS-SLEKLMLEGCSSLVEVHQSIGHLKSLVLLNL 714

Query: 487 KDCTSLITLPGKIL-MKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
           K C  +  LP  I  +KSLE LN      L+ LP  +  ++ L+ L ++ +++  +F   
Sbjct: 715 KGCWRIKILPESICDVKSLESLNISGCSQLEKLPERMGDIESLTEL-LADEIQNEQFLFS 773

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLV--LLNLKNCRSLEILPVTVSNLKCLRSLK 597
           + H++H+ +L L  +      LS       +   ++    R    LP +  + + ++ LK
Sbjct: 774 IGHLKHVRKLSLRVSNFNQDSLSSTSCPSPISTWISASVLRVQPFLPTSFIDWRSVKRLK 833

Query: 598 LS--GCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV--- 652
           L+  G S+          +  L EL L G     +PS I +LTKL+ L + +C NLV   
Sbjct: 834 LANYGLSESATNCVYFGGLSSLQELNLSGNKFLSLPSGISVLTKLQHLRVQNCSNLVSIS 893

Query: 653 RLPSSI 658
            LPSS+
Sbjct: 894 ELPSSL 899



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 130/257 (50%), Gaps = 42/257 (16%)

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDC 648
           L  L+ L  S    L K P +  S   L +L L+G +S+ EV  SI  L  L LLNL  C
Sbjct: 660 LNKLKILNFSHSKHLIKTPNLHSS--SLEKLMLEGCSSLVEVHQSIGHLKSLVLLNLKGC 717

Query: 649 KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL----------------- 691
             +  LP SI  +KSL++LN+SGC +LE +PE +G IESL EL                 
Sbjct: 718 WRIKILPESICDVKSLESLNISGCSQLEKLPERMGDIESLTELLADEIQNEQFLFSIGHL 777

Query: 692 ----------------DISGTAVPHSTSWYSYIPINLMRKSVALKLP-SLSGLCSLRKLN 734
                            +S T+ P   S  ++I  +++R  V   LP S     S+++L 
Sbjct: 778 KHVRKLSLRVSNFNQDSLSSTSCPSPIS--TWISASVLR--VQPFLPTSFIDWRSVKRLK 833

Query: 735 LTDCNLMEGALPS-DIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
           L +  L E A      G L SL+EL LS N F+SLP+ I+ L+KL ++ +++C  L S+ 
Sbjct: 834 LANYGLSESATNCVYFGGLSSLQELNLSGNKFLSLPSGISVLTKLQHLRVQNCSNLVSIS 893

Query: 794 QLPPNIRQVRVNGCASL 810
           +LP ++ ++  + C S+
Sbjct: 894 ELPSSLEKLYADSCRSM 910


>gi|225464430|ref|XP_002264399.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1673

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 300/819 (36%), Positives = 429/819 (52%), Gaps = 138/819 (16%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M    EKL+ LM+  S++V ++GI G+GG+GKTTIA+ +Y+ IS+EF  S FL NVRE  
Sbjct: 186 MSFHLEKLKSLMNIESNEVCVVGISGIGGIGKTTIAKAIYNDISYEFHGSCFLKNVRE-R 244

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           SK   + LQ++LL  +L+     + N+ +G+ M+ + L  KKVL+V+DDV  +KQL+ LA
Sbjct: 245 SKDNTLQLQQELLHGILRGKCLKVSNIEEGLKMIKNCLNSKKVLVVLDDVDALKQLEYLA 304

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
              EWF + S +IIT+RD+  L  +G    Y+   LN +E+++LF+  AFK   P +   
Sbjct: 305 EEPEWFSTKSIVIITTRDKRFLTQYGKHVSYEVEKLNEEESIELFSRWAFKQNLPQEAYR 364

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            LS  II YA GLPLAL+VLGSF  G++  +W+  L +LE  P  EI ++L+IS+DGL +
Sbjct: 365 NLSYHIIEYAKGLPLALKVLGSFFLGKTRSQWKEALHKLEKIPHIEIQNVLKISYDGLND 424

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
           +EK IFLDIACFF+G D++ V+  L         GI +L +K LIT+  N L MH+L+Q+
Sbjct: 425 IEKGIFLDIACFFEGEDKEVVSRILHNVSIE--CGISILHDKGLITILENKLEMHNLIQQ 482

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G +IV+++ P+E GK SRLW  E+V  VLT++TGTE +EGI+LD    E   +   + +
Sbjct: 483 MGHEIVRQECPKEPGKWSRLWDPEDVYRVLTKNTGTEAIEGIILDISASEQIQF---TTE 539

Query: 361 AFSKMTNLRLL---------------------KICNLQLPNGLEYLSNRLRLLGWRGYPL 399
           AF  M  LRLL                     ++  + LP   +  S  L  L W GY L
Sbjct: 540 AFKMMNRLRLLIVHQDAKYDSMVEHHVVGDQVQLSKMHLPANFQIPSFELTFLHWDGYSL 599

Query: 400 KFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEK 459
           + LPSN Q D  +E+++  S I +L +G    + LKV+ LS S +LI++PD T  PNLE 
Sbjct: 600 ESLPSNFQADNLVELHLRCSNIKQLCEGNMIFNILKVINLSFSVHLIKIPDITSVPNLEI 659

Query: 460 LILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGL 519
           LILEGCT                                         NL SLP+ I  L
Sbjct: 660 LILEGCT-----------------------------------------NLMSLPSDIYKL 678

Query: 520 KCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLP-LSIELLSGLVLLNLKNCR 578
           K L TL     LK R FPEI E M++L EL+L  T ++ LP  S + L GL  L+L  CR
Sbjct: 679 KGLRTLCCRECLKLRSFPEIKERMKNLRELYLSETDLKELPSSSTKHLKGLTDLDLTGCR 738

Query: 579 SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRS---------------------MKDL 617
           +L  +P ++  ++ L++L  S C KL K PE + S                     +  L
Sbjct: 739 NLIHVPKSICAMRSLKALSFSYCPKLDKLPEDLESLPCLESLSLNFLRCELPCLSGLSSL 798

Query: 618 SELFLDGTSI-------------------------KEVPSSIELLTKLELLNLSDCKNLV 652
            EL LD ++I                         + + S+I  L+ LE L L    +  
Sbjct: 799 KELSLDQSNITGEVIPNDNGLSSLKSLSLNYNRMERGILSNIFCLSSLEELKLRG-NHFS 857

Query: 653 RLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINL 712
            +P+ I  L  L++LNLS C KL  +PE      SL  LD  G+ V  S+      P +L
Sbjct: 858 TIPAGISKLPRLRSLNLSHCKKLLQIPELPS---SLRALDTHGSPVTLSSG-----PWSL 909

Query: 713 MRKSVALKLPSLSGLCSLRKLNLTDCNLMEGA-LPSDIG 750
           ++             C    +  TDCN  +   +P D G
Sbjct: 910 LK-------------CFKSAIQETDCNFTKVVFIPGDSG 935



 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 147/404 (36%), Positives = 208/404 (51%), Gaps = 57/404 (14%)

Query: 548  ELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKF 607
            +L L G     LP +IE    L  L L+NC  LE LP  +  LK L+SL  SGCS+LK F
Sbjct: 1137 KLCLAGNEFYELP-TIECPLALDSLCLRNCEKLESLPSDICKLKSLKSLFCSGCSELKSF 1195

Query: 608  PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL 667
            PEIV +M++L +L+L+ T+I+E+PSSI+ L  L+ L++  C NLV LP SI  L SLK L
Sbjct: 1196 PEIVENMENLRKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNLVSLPESICNLTSLKVL 1255

Query: 668  NLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGL 727
             +  C KL  +PE LG + SLEEL        ++T  Y          S+  +LPSLSGL
Sbjct: 1256 VVDCCPKLYKLPENLGSLRSLEEL--------YATHSY----------SIGCQLPSLSGL 1297

Query: 728  CSLRK-------------------------LNLTDCNLMEGALPSDIGNLCSLKELYLSK 762
            CSLR                          LNL++ NL+EG +P +I NL SL+ L L  
Sbjct: 1298 CSLRILDIQNSNLSQRAIPNDICCLYSLKLLNLSNFNLIEGGIPREIYNLSSLQALLLGG 1357

Query: 763  NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKS 822
            N F S+P  I+ L+ L  ++L  C+ L  +P+   +++ + V+ C SL TL     L + 
Sbjct: 1358 NHFSSIPDGISRLTALRVLDLSHCQNLLRIPEFSSSLQVLDVHSCTSLETLSSPSNLLQ- 1416

Query: 823  DSTMIACLDSLKL---LGNKSLAFSMLREYLEAVSNTRQHLSVVVP-GSEIPEWFMYQNE 878
             S ++ C  SL     L N       +  YL         +S+ +P  S IPEW  YQ E
Sbjct: 1417 -SCLLKCFKSLIQDLELENDIPIEPHVAPYLNG------GISIAIPRSSGIPEWIRYQKE 1469

Query: 879  GSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPT 922
            GS +    P N Y     +G+A+  + HV  +   ++ F +  T
Sbjct: 1470 GSKVAKKLPRNWYKNDDFLGFALFSI-HVPLDYESDDLFDNQDT 1512



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 145/513 (28%), Positives = 226/513 (44%), Gaps = 131/513 (25%)

Query: 563  IELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL 622
            I  +  L +L L+ C +L  LP  +  LK LR+L    C KL+ FPEI   MK+L EL+L
Sbjct: 651  ITSVPNLEILILEGCTNLMSLPSDIYKLKGLRTLCCRECLKLRSFPEIKERMKNLRELYL 710

Query: 623  DGTSIKEVPSS-IELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPET 681
              T +KE+PSS  + L  L  L+L+ C+NL+ +P SI A++SLK L+ S C KL+ +PE 
Sbjct: 711  SETDLKELPSSSTKHLKGLTDLDLTGCRNLIHVPKSICAMRSLKALSFSYCPKLDKLPED 770

Query: 682  LGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLM 741
            L  +  LE L                  +N +R     +LP LSGL SL++L+L   N+ 
Sbjct: 771  LESLPCLESLS-----------------LNFLR----CELPCLSGLSSLKELSLDQSNIT 809

Query: 742  EGALPSDIGN-----------------------LCSLKELYLSKNSFVSLPTSITHLSKL 778
               +P+D G                        L SL+EL L  N F ++P  I+ L +L
Sbjct: 810  GEVIPNDNGLSSLKSLSLNYNRMERGILSNIFCLSSLEELKLRGNHFSTIPAGISKLPRL 869

Query: 779  LNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGN 838
             ++ L  CK+L  +P+LP ++R +  +G  S VTL                         
Sbjct: 870  RSLNLSHCKKLLQIPELPSSLRALDTHG--SPVTL------------------------- 902

Query: 839  KSLAFSMLREYLEAVSNTRQHLS--VVVPG-SEIPEWFMYQNEGSSITVTRPSNLYNKKK 895
             S  +S+L+ +  A+  T  + +  V +PG S IP+W     +GS      P N Y    
Sbjct: 903  SSGPWSLLKCFKSAIQETDCNFTKVVFIPGDSGIPKWINGFQKGSYAERMLPQNWYQDNM 962

Query: 896  LVGYAICCVFHVLKN---------------------------SRGNNCFGSYPTHQLNCH 928
             +G++I C + +L N                           +  +    ++ +H L CH
Sbjct: 963  FLGFSIGCAYVLLDNESDREFDYSSENESEHTSSDESDYSSENEESQKKSAHTSHNLECH 1022

Query: 929  IGHGIYGIGFRD-------------KFGQAG-SDHLWLLYLSRQTCYDIRLPLESNLEPF 974
            +     G   RD             +  + G SD +W++Y  +     + +P     E F
Sbjct: 1023 LIMEGEGDDLRDLEHFPFPFDCECYEDDEDGVSDQMWVMYYPK-----VAIP-----ENF 1072

Query: 975  ESNH---VNVSFEPW--LGQGLEVKMCGLHPVY 1002
             SN    +  S E +   G+ L+VK C +  +Y
Sbjct: 1073 HSNQWTALQASIEGYNRYGKPLKVKYCVIDLIY 1105



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 143/256 (55%), Gaps = 10/256 (3%)

Query: 509  LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSG 568
            L+SLP+ I  LK L +L  SG  + + FPEIVE+ME+L +L+L  TAI  LP SI+ L G
Sbjct: 1168 LESLPSDICKLKSLKSLFCSGCSELKSFPEIVENMENLRKLYLNQTAIEELPSSIDHLQG 1227

Query: 569  LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT-SI 627
            L  L++++C +L  LP ++ NL  L+ L +  C KL K PE + S++ L EL+   + SI
Sbjct: 1228 LQCLSVESCDNLVSLPESICNLTSLKVLVVDCCPKLYKLPENLGSLRSLEELYATHSYSI 1287

Query: 628  KEVPSSIELLTKLELLNLSDCKNLVR-LPSSIIALKSLKTLNLSGCFKLE-NVPETLGQI 685
                 S+  L  L +L++ +     R +P+ I  L SLK LNLS    +E  +P  +  +
Sbjct: 1288 GCQLPSLSGLCSLRILDIQNSNLSQRAIPNDICCLYSLKLLNLSNFNLIEGGIPREIYNL 1347

Query: 686  ESLEELDISG---TAVPHSTSWYSYIPI-NLMRKSVALKLPSLSGLCSLRKLNLTDCNLM 741
             SL+ L + G   +++P   S  + + + +L      L++P  S   SL+ L++  C  +
Sbjct: 1348 SSLQALLLGGNHFSSIPDGISRLTALRVLDLSHCQNLLRIPEFSS--SLQVLDVHSCTSL 1405

Query: 742  EG-ALPSDIGNLCSLK 756
            E  + PS++   C LK
Sbjct: 1406 ETLSSPSNLLQSCLLK 1421



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 100/208 (48%), Gaps = 15/208 (7%)

Query: 399  LKFLPSNLQ-MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPN 456
            LK  P  ++ M+   ++Y+  + I EL   I HL  L+ + +   +NL+ +P+      +
Sbjct: 1192 LKSFPEIVENMENLRKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNLVSLPESICNLTS 1251

Query: 457  LEKLILEGCTRLYEIHPSL----------LLHNKLIILNMKDCTSLITLPGKILMKSLEK 506
            L+ L+++ C +LY++  +L            H+  I   +   + L +L  +IL      
Sbjct: 1252 LKVLVVDCCPKLYKLPENLGSLRSLEELYATHSYSIGCQLPSLSGLCSL--RILDIQNSN 1309

Query: 507  LNLKSLPTTISGLKCLSTLDVSG-DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIEL 565
            L+ +++P  I  L  L  L++S  +L     P  + ++  L  L L G     +P  I  
Sbjct: 1310 LSQRAIPNDICCLYSLKLLNLSNFNLIEGGIPREIYNLSSLQALLLGGNHFSSIPDGISR 1369

Query: 566  LSGLVLLNLKNCRSLEILPVTVSNLKCL 593
            L+ L +L+L +C++L  +P   S+L+ L
Sbjct: 1370 LTALRVLDLSHCQNLLRIPEFSSSLQVL 1397



 Score = 47.0 bits (110), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 100/222 (45%), Gaps = 29/222 (13%)

Query: 616 DLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
           +L+ L  DG S++ +PS+ +    +EL +L  C N+ +L    +    LK +NLS    L
Sbjct: 588 ELTFLHWDGYSLESLPSNFQADNLVEL-HLR-CSNIKQLCEGNMIFNILKVINLSFSVHL 645

Query: 676 ENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMR-KSVALKLPSLSGLCSLRKLN 734
             +P+ +  + +LE L + G               NLM   S   KL  L  LC    L 
Sbjct: 646 IKIPD-ITSVPNLEILILEGCT-------------NLMSLPSDIYKLKGLRTLCCRECLK 691

Query: 735 LTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSIT-HLSKLLNIELEDCKRLQSLP 793
           L        + P     + +L+ELYLS+     LP+S T HL  L +++L  C+ L  +P
Sbjct: 692 LR-------SFPEIKERMKNLRELYLSETDLKELPSSSTKHLKGLTDLDLTGCRNLIHVP 744

Query: 794 QLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKL 835
           +    +R ++     S    LD L     D   + CL+SL L
Sbjct: 745 KSICAMRSLKALS-FSYCPKLDKL---PEDLESLPCLESLSL 782


>gi|297791369|ref|XP_002863569.1| hypothetical protein ARALYDRAFT_917150 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297309404|gb|EFH39828.1| hypothetical protein ARALYDRAFT_917150 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1177

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 304/894 (34%), Positives = 472/894 (52%), Gaps = 100/894 (11%)

Query: 18   DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVR---------EISSKGGLVSL 68
            +VRMIGI G  G+GKTTI+RV+Y+ + H+F+    +DN++         E S+K   + L
Sbjct: 233  EVRMIGIWGPAGIGKTTISRVLYNKLFHQFQLGAIIDNIKVRYPRPCHDEYSAK---LQL 289

Query: 69   QRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGS 128
            Q++LLSQ++   D     V   + +   RL+ +KVLLV+DDV  + QL ++A +  WFG 
Sbjct: 290  QKELLSQMINQKDM----VVPHLGVAQERLKDRKVLLVLDDVDALVQLDAMAKDVRWFGL 345

Query: 129  GSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIR 188
            GSRII+ ++D  LLK HG+  +YK      DEAL++F M AF    P     Q++  +  
Sbjct: 346  GSRIIVVTQDLKLLKAHGIKYIYKVDFPTSDEALEIFCMYAFGQKSPKVGFEQIARTVTT 405

Query: 189  YAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLD 248
             AG LPL L V+GS+L   S  EW  ++ RL      +I  +L+ S++ L E EK +FL 
Sbjct: 406  LAGKLPLGLRVMGSYLRRMSKQEWARSIPRLRTSLDDDIESVLKFSYNSLAEEEKDLFLH 465

Query: 249  IACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQR 308
            IACFF+    + +  FL         G+++L +K L++++   + MH+LL +LG  I+++
Sbjct: 466  IACFFRRERIETLEVFLANKFGDVKQGLQILADKSLLSLNFGNIEMHNLLVQLGLDIIRK 525

Query: 309  QSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNL 368
            QS  + GKR  L   E++C VLTE TGT  + GI L+      E  +  S +AF +M NL
Sbjct: 526  QSIHKPGKRQFLVDAEDICEVLTEDTGTRTLVGIDLE-LSGVIEGVINISERAFERMCNL 584

Query: 369  RLLKI-------CN--LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
            + L+        C+  L LP GL  +S +LRLL W  YPL  LPS    +  ++I M  S
Sbjct: 585  QFLRFHHPYGDRCHDILYLPQGLSNISRKLRLLHWERYPLTCLPSKFNPEFLVKINMRDS 644

Query: 420  RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
             + +LW+G + +  LK M LS   NL  +PDF+ A NL++L L  C  L E+  S+    
Sbjct: 645  MLEKLWEGNEPIRNLKWMDLSFCVNLKELPDFSTATNLQELRLVDCLSLVELPSSIGNVT 704

Query: 480  KLIILNMKDCTSLITLPGKI-LMKSLEKL------NLKSLPTTISGLKCLSTLDVSGDLK 532
             L+ L++  C+SL+ LP  I  + +L+KL      +L  LP++I  +  L  L++SG   
Sbjct: 705  NLLELDLIGCSSLVKLPSSIGNLTNLKKLYLNRCSSLVQLPSSIGNVTSLKELNLSGCSS 764

Query: 533  FREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
              E P  + +  +L +L+ +G +++  LP S+  ++ L  L L NC SL   P ++  L 
Sbjct: 765  LLEIPSSIGNTTNLKKLYADGCSSLVELPSSVGNIANLRELQLMNCSSLIEFPSSILKLT 824

Query: 592  CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKN 650
             L+ L LSGCS L K P I  ++ +L  LFL G +S+ E+P SIE  T L+ L L+ C +
Sbjct: 825  RLKDLNLSGCSSLVKLPSI-GNVINLQTLFLSGCSSLVELPFSIENATNLQTLYLNGCSD 883

Query: 651  LVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPI 710
            L+ LPSSI  + +L++L L+GC  L+ +P  +G                           
Sbjct: 884  LLELPSSIWNITNLQSLYLNGCSSLKELPSLVGN-------------------------- 917

Query: 711  NLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPT 770
                   A+ L SLS         L +C+ M   LPS I N  +L  L +S  S      
Sbjct: 918  -------AINLQSLS---------LMNCSSMV-ELPSSIWNATNLSYLDVSSCS------ 954

Query: 771  SITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACL 830
            S+  L+  + +EL  C++L S P +P ++  +    C SLV  LD               
Sbjct: 955  SLVGLN--IKLELNQCRKLVSHPVVPDSL-ILDAGDCESLVERLD------------CSF 999

Query: 831  DSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
             + K++ N +  F + +E  + +  T    + ++PG ++P +F Y+  G S+TV
Sbjct: 1000 QNPKIVLNFANCFKLNQEARDLIIQTSTCRNAILPGGKVPAYFTYRATGDSLTV 1053


>gi|356545161|ref|XP_003541013.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1114

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 309/922 (33%), Positives = 458/922 (49%), Gaps = 131/922 (14%)

Query: 1    MDSRCEKLRFLMDSGS-SDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            M+SR E+L   +  GS +DVR++GI GM G+GKT +AR +Y+ IS +F+    +D+V +I
Sbjct: 202  MESRVEELVKCLRLGSVNDVRVVGISGMSGIGKTELARALYERISDQFDVHCLVDDVSKI 261

Query: 60   SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
                G + +Q+QLLSQ L   +  I++V  G  +   RLQ  K L+V D+VV+ +QLQ  
Sbjct: 262  YQDSGRLGVQKQLLSQCLNEKNLEIYDVSQGTCLAWKRLQNAKALVVFDEVVNERQLQMF 321

Query: 120  AGNR-----EWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
             GNR     E  G GSRIII SRDEH+L+THGVD+VY+   L+ +EA+QLF   AFK   
Sbjct: 322  TGNRDSLLRECLGGGSRIIIISRDEHILRTHGVDDVYQVPLLDREEAVQLFCKNAFKDNF 381

Query: 175  PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
             +    + +  I+  A G PLA++ +GS L G +  +WRS + +L  +   +I+D+L+IS
Sbjct: 382  IMSGYAEFADVILSQAQGNPLAIKAVGSSLFGLNAPQWRSAVAKLREQKSRDIMDVLRIS 441

Query: 235  FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
            FD L +  K+IFLDIACFF       V   L+  GF+P  G++VL ++ LI      + M
Sbjct: 442  FDELDDTNKEIFLDIACFFNNFYVKSVMEILDFRGFYPEHGLQVLQDRSLIINEYGIIGM 501

Query: 295  HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
            H LL +LG+ IV+ +SP+E    SRLWK +++  +++ +   E +E I +D Y  ++E +
Sbjct: 502  HGLLIDLGRCIVREKSPKEPSNWSRLWKYQDLYKIMSNNMAAEKLEAIAVD-YESDDEGF 560

Query: 355  LCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
                  A SKM++L+LLK+  +     L +LS+ L  + W  YP   LP + Q +K +E+
Sbjct: 561  HEIRVDALSKMSHLKLLKLWGVTSSGSLNHLSDELGYITWDKYPFVCLPKSFQPNKLVEL 620

Query: 415  YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
             + YS I  LWK  K L  L+ ++LSHS+NLI +PD   A NLE L L+GC +L +I+PS
Sbjct: 621  CLEYSNIKHLWKDRKPLHNLRRLVLSHSKNLIELPDLGEALNLEWLDLKGCIKLKKINPS 680

Query: 475  LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFR 534
            + L  KL  LN+KDCTSL+ LP        E LNL+ L  T+ G                
Sbjct: 681  IGLLRKLAYLNLKDCTSLVELP-----HFKEDLNLQHL--TLEG---------------- 717

Query: 535  EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
                   H++H++              S+ LL  L  L L++C+SL  LP ++  L  L+
Sbjct: 718  -----CTHLKHINP-------------SVGLLRKLEYLILEDCKSLVSLPNSILCLNSLK 759

Query: 595  SLKLSGCSKLK-----KFPEIVRSMKDL--SELFLDGTSIKEVPSSIELLT-KLELLNLS 646
             L L GCS L      K P     +K L   E   D  SI  +     + + +L      
Sbjct: 760  YLSLYGCSGLYNSGLLKEPRDAELLKQLCIGEASTDSKSISSIVKRWFMWSPRLWYSRAH 819

Query: 647  DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYS 706
            +      LPS+     S+  L+LS C  L  +P+ +G +  LE L++ G +         
Sbjct: 820  NDSVGCLLPSAPTIPPSMIQLDLSYC-NLVQIPDAIGNLHCLEILNLEGNSFA------- 871

Query: 707  YIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFV 766
                          LP L GL  LR L L  C  ++                      F 
Sbjct: 872  -------------ALPDLKGLSKLRYLKLDHCKHLK---------------------DFP 897

Query: 767  SLP--TSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDS 824
             LP  T+   L + L + + +C  L            V   GC+S+V            S
Sbjct: 898  KLPARTANVELPRALGLSMFNCPEL------------VEREGCSSMVL-----------S 934

Query: 825  TMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
             MI  + +     +    F+     +   SN   ++  V+PGSEI  WF  Q+      +
Sbjct: 935  WMIQIVQA-----HYQNNFAWWPIGMPGFSNP--YICSVIPGSEIEGWFTTQHVSKDNLI 987

Query: 885  T-RPSNLYNKKKLVGYAICCVF 905
            T  P  L    K +G A C VF
Sbjct: 988  TIDPPPLMQHDKCIGVAYCVVF 1009


>gi|357486939|ref|XP_003613757.1| Disease resistance-like protein [Medicago truncatula]
 gi|355515092|gb|AES96715.1| Disease resistance-like protein [Medicago truncatula]
          Length = 807

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 242/598 (40%), Positives = 362/598 (60%), Gaps = 23/598 (3%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR EK+  L++  S++ V M+GI GMGGLGKTT+A  VY+ I+ +F++  FL NVRE 
Sbjct: 227 LESRVEKVNSLLEVESNEGVHMVGIYGMGGLGKTTLACAVYNCIADQFDSLCFLANVREN 286

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S K GLV LQ  LL +L +  D+ + ++  G+ ++ SRL  KK+LL++DDV  ++QL++L
Sbjct: 287 SMKHGLVHLQEMLLHELGEEKDHKLCSLNKGVSIIKSRLHGKKILLILDDVNSLEQLKAL 346

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFGSGSR+IIT+RD+HLL  + V+ VY+  GLN  EALQLF   AFKT +  Q  
Sbjct: 347 AGELDWFGSGSRVIITTRDKHLLHVYRVERVYEVEGLNRKEALQLFGCNAFKTQKIDQRY 406

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +S R++ Y+ GLPLA+E++GS L G+++ EW S L+     P   I +IL++S+DGL+
Sbjct: 407 EDISKRVVLYSKGLPLAVEIIGSDLYGKTILEWESALDTYARIPHENIQEILRVSYDGLK 466

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFL-EGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
           E EK+IFLD+ACFFKG     V N L  G GF P   I+VLI+K LI   + ++ MHD++
Sbjct: 467 EFEKEIFLDLACFFKGAKLSDVKNILCCGRGFSPDYAIQVLIDKSLIKFEDYSVKMHDMI 526

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           +++G++IV+ ++P + G+RSRLW  +++ HV  E+ G++  E I+L     +    +   
Sbjct: 527 EDMGREIVRLEAPSKPGERSRLWFSKDILHVFKENKGSDKTEIIMLRLLKDKK---VQCD 583

Query: 359 AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
             A   M NL++L I       G  +L   LR+L W  YP   LP++    K + + +  
Sbjct: 584 RNALKNMENLKILVIEEACFSKGPNHLPKSLRVLKWCDYPESSLPADFDPKKLVILDLSM 643

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
                  + I     L+ M LS  + L ++PD +GAPNL+KL L+ C  L ++H S+ L 
Sbjct: 644 GHFTFRNQMIMKFKSLREMKLSGCKFLKQVPDISGAPNLKKLHLDSCKNLVKVHDSVGLL 703

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
            KL  LN+  CTSL  LP  I + SL+ ++L++         C S          + FPE
Sbjct: 704 KKLEDLNLNRCTSLRVLPHGINLPSLKTMSLRN---------CAS---------LKRFPE 745

Query: 539 IVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
           I+E ME+++ L L  T I  LP SIELL GL  L +  C+ L  LP ++  L  L ++
Sbjct: 746 ILEKMENITYLGLSDTGISELPFSIELLEGLTNLTIDRCQELVELPSSIFMLPKLETV 803



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 95/174 (54%), Gaps = 3/174 (1%)

Query: 496 PGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTA 555
           P K+++  L   +       I   K L  + +SG    ++ P+I     +L +LHL+   
Sbjct: 633 PKKLVILDLSMGHFTFRNQMIMKFKSLREMKLSGCKFLKQVPDI-SGAPNLKKLHLDSCK 691

Query: 556 -IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
            +  +  S+ LL  L  LNL  C SL +LP  + NL  L+++ L  C+ LK+FPEI+  M
Sbjct: 692 NLVKVHDSVGLLKKLEDLNLNRCTSLRVLPHGI-NLPSLKTMSLRNCASLKRFPEILEKM 750

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
           ++++ L L  T I E+P SIELL  L  L +  C+ LV LPSSI  L  L+T+N
Sbjct: 751 ENITYLGLSDTGISELPFSIELLEGLTNLTIDRCQELVELPSSIFMLPKLETVN 804



 Score = 48.1 bits (113), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 78/207 (37%), Gaps = 68/207 (32%)

Query: 587 VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLS 646
           +   K LR +KLSGC  LK+ P+I  +                          L+ L+L 
Sbjct: 653 IMKFKSLREMKLSGCKFLKQVPDISGA------------------------PNLKKLHLD 688

Query: 647 DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYS 706
            CKNLV++  S+  LK L+ LNL+ C  L  +P               G  +P       
Sbjct: 689 SCKNLVKVHDSVGLLKKLEDLNLNRCTSLRVLPH--------------GINLP------- 727

Query: 707 YIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFV 766
                      +LK  SL    SL++             P  +  + ++  L LS     
Sbjct: 728 -----------SLKTMSLRNCASLKRF------------PEILEKMENITYLGLSDTGIS 764

Query: 767 SLPTSITHLSKLLNIELEDCKRLQSLP 793
            LP SI  L  L N+ ++ C+ L  LP
Sbjct: 765 ELPFSIELLEGLTNLTIDRCQELVELP 791


>gi|227438247|gb|ACP30613.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 950

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 261/670 (38%), Positives = 377/670 (56%), Gaps = 41/670 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD + +++  L+ + S DVR IGI G  G+GKT IA  ++  IS ++E   FL ++ +  
Sbjct: 285 MDMQIKEILSLLCTESQDVRRIGIWGAVGIGKTAIAEEIFHRISVQYETCVFLKDLHKEV 344

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
              G  +++ +LLS+LL++  + I      +  L SRLQRK  L+V+DDV D + +++ A
Sbjct: 345 ELKGYDAVREELLSKLLEVEPDVIRTSNIKVSFLRSRLQRKSALVVLDDVNDFRDVETFA 404

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
               +FG  SR+IITSR+ H+      D VY+   L +  +L L N   F++    +   
Sbjct: 405 EMLSYFGPRSRVIITSRNRHVFILSKTDYVYEVKPLEFPNSLHLLNPGIFQSGLSPELYK 464

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            LS  +++++ G P  L+ L          EW+S  + ++      I  I + S  GL E
Sbjct: 465 TLSLELVKFSNGNPQVLQFLSR--------EWKSLSKEIQKSSAIYIPGIFERSCCGLDE 516

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            EK IFLDIACFF+  D+D V   L+GCGF   IG + L++K L+T+ +NT+ M   LQ 
Sbjct: 517 NEKSIFLDIACFFRKMDKDDVAMLLDGCGFSAHIGFKNLVDKSLLTISHNTVDMLWFLQA 576

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
            G++IV+++S +  G RSRLW  E++  V  ++ GT  +EG+ LD     +++   AS  
Sbjct: 577 TGREIVRQESIDRPGDRSRLWNAEDIRDVFLDNIGTSDIEGLFLDM----SQLKFDASPN 632

Query: 361 AFSKMTNLRLLKIC--------NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
            F KM NLRLLK           + LP GLEYL  +LRLL W  YP+  LP        I
Sbjct: 633 VFDKMCNLRLLKFYFSELIENHGVSLPQGLEYLPTKLRLLHWEYYPISSLPQCFDPKNLI 692

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
           E+ M  S + +LWKG K L+ LK M LS+S  L ++P  T A NLE L LEGC  L  I 
Sbjct: 693 ELNMPNSCVKKLWKGKKSLENLKKMRLSYSSQLTKLPRLTSAQNLELLDLEGCKSLESIS 752

Query: 473 PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
            S+    KL+ LN+KDC+                 NL+S+P+T S L+ L  L++SG  K
Sbjct: 753 HSICYLKKLVSLNLKDCS-----------------NLESVPST-SDLESLEVLNLSGCSK 794

Query: 533 FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKC 592
              FPEI  +++   EL+L GT IR +P SI+ L  L  L+L+N R L ILP ++  LK 
Sbjct: 795 LENFPEISPNVK---ELYLGGTMIREIPSSIKNLVLLEKLDLENSRHLVILPTSMCKLKH 851

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV 652
           L +L LSGCS L+ FP+  R MK L  L L  T+I+E+PSSI  L  LE +    CK+LV
Sbjct: 852 LETLNLSGCSSLEYFPDFSRKMKCLKSLDLSRTAIRELPSSISYLIALEEVRFVGCKSLV 911

Query: 653 RLPSSIIALK 662
           RLP +  +L+
Sbjct: 912 RLPDNAWSLR 921



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/221 (40%), Positives = 132/221 (59%), Gaps = 11/221 (4%)

Query: 494 TLPGKILMKSLEKLNL-----KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSE 548
           +LP     K+L +LN+     K L      L+ L  + +S   +  + P +    ++L  
Sbjct: 681 SLPQCFDPKNLIELNMPNSCVKKLWKGKKSLENLKKMRLSYSSQLTKLPRLTS-AQNLEL 739

Query: 549 LHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKF 607
           L LEG  ++  +  SI  L  LV LNLK+C +LE +P T S+L+ L  L LSGCSKL+ F
Sbjct: 740 LDLEGCKSLESISHSICYLKKLVSLNLKDCSNLESVPST-SDLESLEVLNLSGCSKLENF 798

Query: 608 PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL 667
           PEI  ++K   EL+L GT I+E+PSSI+ L  LE L+L + ++LV LP+S+  LK L+TL
Sbjct: 799 PEISPNVK---ELYLGGTMIREIPSSIKNLVLLEKLDLENSRHLVILPTSMCKLKHLETL 855

Query: 668 NLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI 708
           NLSGC  LE  P+   +++ L+ LD+S TA+    S  SY+
Sbjct: 856 NLSGCSSLEYFPDFSRKMKCLKSLDLSRTAIRELPSSISYL 896



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 145/296 (48%), Gaps = 21/296 (7%)

Query: 536 FPEIVEHM-EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
            P+ +E++   L  LH E   I  LP   +    L+ LN+ N   ++ L     +L+ L+
Sbjct: 658 LPQGLEYLPTKLRLLHWEYYPISSLPQCFDP-KNLIELNMPNS-CVKKLWKGKKSLENLK 715

Query: 595 SLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVR 653
            ++LS  S+L K P +  S ++L  L L+G  S++ +  SI  L KL  LNL DC NL  
Sbjct: 716 KMRLSYSSQLTKLPRLT-SAQNLELLDLEGCKSLESISHSICYLKKLVSLNLKDCSNLES 774

Query: 654 LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI----P 709
           +PS+   L+SL+ LNLSGC KLEN PE    ++   EL + GT +    S    +     
Sbjct: 775 VPSTS-DLESLEVLNLSGCSKLENFPEISPNVK---ELYLGGTMIREIPSSIKNLVLLEK 830

Query: 710 INLMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSL 768
           ++L      + LP S+  L  L  LNL+ C+ +E   P     +  LK L LS+ +   L
Sbjct: 831 LDLENSRHLVILPTSMCKLKHLETLNLSGCSSLE-YFPDFSRKMKCLKSLDLSRTAIREL 889

Query: 769 PTSITHLSKLLNIELEDCKRLQSLP------QLPPNIRQVRVNGCASLVTLLDALK 818
           P+SI++L  L  +    CK L  LP      +     RQ+     + L   LD LK
Sbjct: 890 PSSISYLIALEEVRFVGCKSLVRLPDNAWSLRFKVEFRQIDTEKFSKLWNRLDWLK 945


>gi|357513265|ref|XP_003626921.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355520943|gb|AET01397.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 2300

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 240/567 (42%), Positives = 344/567 (60%), Gaps = 26/567 (4%)

Query: 1    MDSRCEK-LRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            ++ R EK +RFL    +  V ++GI GMGG+GK+TIA+V+Y+ + +EFE   FL N+RE+
Sbjct: 1362 LEPRAEKSIRFLR-QNTRGVCLVGIWGMGGIGKSTIAKVIYNDLCYEFENQSFLANIREV 1420

Query: 60   SSKG-GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
              K  G + LQ Q LS +LK     + +V  G  M+  +L+ K++L V+DDV +++Q  +
Sbjct: 1421 WEKDRGRIDLQEQFLSDILKTRKIKVLSVEQGKTMIKQQLRAKRILAVLDDVSELEQFDA 1480

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            L   R   G GS IIIT+RD  +L    VD +Y+   LN  E+L+LF   AF+   P Q+
Sbjct: 1481 LC-QRNSVGPGSIIIITTRDLRVLNILEVDFIYEAEELNASESLELFCKHAFRKAIPTQD 1539

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             + LS  ++ Y GG+PLALEVLGS+L  R   EWRS L +LE  P  +I +IL+ISFDGL
Sbjct: 1540 FLILSRDVVAYCGGIPLALEVLGSYLFKRKKQEWRSVLSKLEKIPNDQIHEILKISFDGL 1599

Query: 239  QE-LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT-LWMHD 296
            ++ +EK IFLD+ CFF G DR YVT  L GCG +  IGI VLIE+ LI V  N  L MH 
Sbjct: 1600 KDRMEKNIFLDVCCFFIGKDRAYVTKILNGCGLNADIGITVLIERSLIKVEKNKKLGMHA 1659

Query: 297  LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
            LL+++G++IV+  SPEE  K +RLW  E+V +VL + TGT+ +EG+V+      N V  C
Sbjct: 1660 LLRDMGREIVRESSPEEPEKHTRLWCHEDVVNVLADYTGTKAIEGLVM-KLPKTNRV--C 1716

Query: 357  ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
                AF KM  LRLL++ N+Q+    +     LR L W+G+PLK+ P N      + + +
Sbjct: 1717 FDTIAFEKMIRLRLLQLDNVQVIGDYKCFPKHLRWLSWQGFPLKYTPENFYQKNLVAMEL 1776

Query: 417  CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             +S + ++WK  + ++ LK++ LSHS+NL R PDF+  PNLEKLI++ C  L E+HPS+ 
Sbjct: 1777 KHSNLAQVWKKPQLIEGLKILNLSHSKNLKRTPDFSKLPNLEKLIMKDCQSLLEVHPSIG 1836

Query: 477  LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
                L++LN+KDCTSL  LP +I                   L+ + TL +SG  K  + 
Sbjct: 1837 DLKNLLMLNLKDCTSLGNLPREIYQ-----------------LRRVETLILSGCSKIDKL 1879

Query: 537  PEIVEHMEHLSELHLEGTAIRGLPLSI 563
             E +  ME L+ L    T ++  P SI
Sbjct: 1880 EEDIVQMESLTTLMAANTGVKQPPFSI 1906



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 173/393 (44%), Gaps = 35/393 (8%)

Query: 522  LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
            L  + V GD K   FP+      HL  L  +G  ++  P +      LV + LK+    +
Sbjct: 1733 LDNVQVIGDYKC--FPK------HLRWLSWQGFPLKYTPENF-YQKNLVAMELKHSNLAQ 1783

Query: 582  IL--PVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLT 638
            +   P  +  LK L    LS    LK+ P+  + + +L +L + D  S+ EV  SI  L 
Sbjct: 1784 VWKKPQLIEGLKIL---NLSHSKNLKRTPDFSK-LPNLEKLIMKDCQSLLEVHPSIGDLK 1839

Query: 639  KLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
             L +LNL DC +L  LP  I  L+ ++TL LSGC K++ + E + Q+ESL  L  + T V
Sbjct: 1840 NLLMLNLKDCTSLGNLPREIYQLRRVETLILSGCSKIDKLEEDIVQMESLTTLMAANTGV 1899

Query: 699  PHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKEL 758
                      P +++R S ++   SL G   L        +L+   +   + +L  +   
Sbjct: 1900 KQP-------PFSIVR-SKSIGYISLCGYEGLSHHVFP--SLIRSWISPTMNSLPRIPPF 1949

Query: 759  YLSKNSFVSLPTSITHLSKLLNIE-LEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDA- 816
                 S  SL     +L+ +   + L  C RL+S+     +  Q++      L  L DA 
Sbjct: 1950 GGMSKSLFSLDIDSNNLALVSQSQILNSCSRLRSVSVQCDSEIQLKQEFGRFLDDLYDAG 2009

Query: 817  -LKLCKSDSTMIACLDSLKLL---GNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEW 872
              ++  S +  I+ L    LL   G+  +  + LR+ L     T    S  +PG   P W
Sbjct: 2010 LTEMRTSHALQISNLTMRSLLFGIGSCHIVINTLRKSLSQGLATNFGDS-FLPGDNYPSW 2068

Query: 873  FMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
              Y+ EG S+    P +  +  K  G A+C ++
Sbjct: 2069 LAYKGEGPSVLFQVPEDRDSCMK--GIALCVLY 2099


>gi|357454621|ref|XP_003597591.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355486639|gb|AES67842.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1169

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 264/677 (38%), Positives = 392/677 (57%), Gaps = 40/677 (5%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGI 91
           KTT+A  VY+ +  E+E S F+ N+ E S K G++ L+ ++LS LLK  D  I       
Sbjct: 234 KTTLAAAVYNRLCFEYEGSCFMANITEESEKHGMIYLKNKILSILLKENDLHIGTPIGVP 293

Query: 92  DMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVY 151
             +  RL RKKVLLV+DD+ D++ L++L G  +WFGSGSRII+T+RD+ +L    V+  Y
Sbjct: 294 PYVKRRLARKKVLLVLDDINDLEHLENLVGGLDWFGSGSRIIVTTRDKQVLGKR-VNCTY 352

Query: 152 KPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDE 211
           +   L  D+A++LF M AF+      E ++LS R+I YA G PLAL+VLGSFL G+S  E
Sbjct: 353 EAKALQSDDAIKLFIMNAFEHGCLDMEWIELSRRVIHYANGNPLALKVLGSFLYGKSKIE 412

Query: 212 WRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFH 271
           W S L++L+  P ++I ++L++S+D L   EK IFL IAC  KG +   +   L+ CGF 
Sbjct: 413 WESQLQKLKKMPHAKIQNVLRLSYDRLDREEKNIFLYIACLLKGYEVQQIIALLDACGFS 472

Query: 272 PVIGIRVLIEKCLITVHNNT----LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVC 327
            +IG+RVL +K LI     +    + MHDL+QE+G +IV+ +  E+ GKRSRLW   +V 
Sbjct: 473 TIIGLRVLKDKALIIEAKGSGRSIVSMHDLIQEMGWEIVREECVEDPGKRSRLWDPNDVH 532

Query: 328 HVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICN-------LQLPN 380
            VLT +TGT+ ++ I L N    +E++L  S + F +M  L+ LK          L LP 
Sbjct: 533 QVLTNNTGTKAIKSITL-NVSKFDELHL--SPQVFGRMQQLKFLKFTQHYGDEKILYLPQ 589

Query: 381 GLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILS 440
           GLE L N L L  W  YPLK LP +   +  +E+ + +SR+ +LW GI+++  LK + LS
Sbjct: 590 GLESLPNDLLLFQWVSYPLKSLPQSFCAENLVELKLTWSRVEKLWDGIQNIQHLKKIDLS 649

Query: 441 HSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKIL 500
           +S+ L+ +PDF+ A NLE++ L GC  L  +HPS+L  NKL+ LN+  C +L +L     
Sbjct: 650 YSKYLLDLPDFSKASNLEEIELFGCKSLLNVHPSILRLNKLVRLNLFYCKALTSLRSDTH 709

Query: 501 MKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLP 560
           ++SL  L L       SG   L    V+ D              ++ +L L  TAI  LP
Sbjct: 710 LRSLRDLFL-------SGCSRLEDFSVTSD--------------NMKDLALSSTAINELP 748

Query: 561 LSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKL--KKFPEIVRSMKDLS 618
            SI  L  L  L L  C+SL  LP  V +L+ LR+L + GC++L       ++  +  L 
Sbjct: 749 SSIGSLKNLETLTLDFCKSLNKLPNEVIDLRSLRALYVHGCTQLDASNLHILLSGLASLE 808

Query: 619 ELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLEN 677
            L L+   ++ E+P +I LL+ L  L L +  ++ R P+SI  L  L+ L++ GC +L+N
Sbjct: 809 TLKLEECRNLSEIPDNISLLSSLRELLLKET-DIERFPASIKHLSKLEKLDVKGCRRLQN 867

Query: 678 VPETLGQIESLEELDIS 694
           +PE    ++ L   D S
Sbjct: 868 MPELPPSLKELYATDCS 884



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 169/562 (30%), Positives = 266/562 (47%), Gaps = 113/562 (20%)

Query: 492  LITLPGKILMKSLEKLNL-----KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHL 546
            L +LP     ++L +L L     + L   I  ++ L  +D+S      + P+  +   +L
Sbjct: 608  LKSLPQSFCAENLVELKLTWSRVEKLWDGIQNIQHLKKIDLSYSKYLLDLPDFSK-ASNL 666

Query: 547  SELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
             E+ L G  ++  +  SI  L+ LV LNL  C++L  L  + ++L+ LR L LSGCS+L+
Sbjct: 667  EEIELFGCKSLLNVHPSILRLNKLVRLNLFYCKALTSLR-SDTHLRSLRDLFLSGCSRLE 725

Query: 606  KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLK 665
             F     +MKDL+   L  T+I E+PSSI  L  LE L L  CK+L +LP+ +I L+SL+
Sbjct: 726  DFSVTSDNMKDLA---LSSTAINELPSSIGSLKNLETLTLDFCKSLNKLPNEVIDLRSLR 782

Query: 666  TLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLS 725
             L + GC                 +LD S   +                         LS
Sbjct: 783  ALYVHGC----------------TQLDASNLHI------------------------LLS 802

Query: 726  GLCSLRKLNLTDC-NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELE 784
            GL SL  L L +C NL E  +P +I  L SL+EL L +      P SI HLSKL  ++++
Sbjct: 803  GLASLETLKLEECRNLSE--IPDNISLLSSLRELLLKETDIERFPASIKHLSKLEKLDVK 860

Query: 785  DCKRLQSLPQLPPNIRQVRVNGCASLVTLL------DALKL--CKSDSTMIAC--LDSLK 834
             C+RLQ++P+LPP+++++    C+SL T++      D L+L   K  +    C  LD L 
Sbjct: 861  GCRRLQNMPELPPSLKELYATDCSSLETVMFNWNASDLLQLQAYKLHTQFQNCVNLDELS 920

Query: 835  L--------LGNKSLAFSML----REYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSI 882
            L        +  K LA++ L     ++L+        + V+ PGS++PEW MY+   +S+
Sbjct: 921  LRAIEVNAQVNMKKLAYNHLSTLGSKFLDG------PVDVIYPGSKVPEWLMYRTTEASV 974

Query: 883  TVTRPSNLYNKKKLVGYAICCVFHVL----KNSRGNNCFGSYPTHQLNCHIGHG-IYGIG 937
            TV   S    K K VG+  C V   L    KN  G +C+            G+G    +G
Sbjct: 975  TVDFSSA--PKSKFVGFIFCVVAGQLPSDDKNFIGCDCY---------LETGNGEKVSLG 1023

Query: 938  FRDKF-----GQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHV-NVSFEPWLGQGL 991
              D +      +  SDH+++ Y     C     P + N++   ++++  VSFE +   G 
Sbjct: 1024 SMDTWTSIHSSEFFSDHIFMWY-DELCCLQNSKPEKENMDELMASYIPKVSFEFFAQSGN 1082

Query: 992  E--------VKMCGLHPVYMDE 1005
                     ++ CG+ P+Y  E
Sbjct: 1083 TWKKRENNMIRGCGVCPIYDTE 1104


>gi|87162712|gb|ABD28507.1| Leucine-rich repeat; Leucine-rich [Medicago truncatula]
          Length = 1006

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 264/678 (38%), Positives = 392/678 (57%), Gaps = 40/678 (5%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGI 91
           KTT+A  VY+ +  E+E S F+ N+ E S K G++ L+ ++LS LLK  D  I       
Sbjct: 71  KTTLAAAVYNRLCFEYEGSCFMANITEESEKHGMIYLKNKILSILLKENDLHIGTPIGVP 130

Query: 92  DMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVY 151
             +  RL RKKVLLV+DD+ D++ L++L G  +WFGSGSRII+T+RD+ +L    V+  Y
Sbjct: 131 PYVKRRLARKKVLLVLDDINDLEHLENLVGGLDWFGSGSRIIVTTRDKQVLGKR-VNCTY 189

Query: 152 KPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDE 211
           +   L  D+A++LF M AF+      E ++LS R+I YA G PLAL+VLGSFL G+S  E
Sbjct: 190 EAKALQSDDAIKLFIMNAFEHGCLDMEWIELSRRVIHYANGNPLALKVLGSFLYGKSKIE 249

Query: 212 WRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFH 271
           W S L++L+  P ++I ++L++S+D L   EK IFL IAC  KG +   +   L+ CGF 
Sbjct: 250 WESQLQKLKKMPHAKIQNVLRLSYDRLDREEKNIFLYIACLLKGYEVQQIIALLDACGFS 309

Query: 272 PVIGIRVLIEKCLITVHNNT----LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVC 327
            +IG+RVL +K LI     +    + MHDL+QE+G +IV+ +  E+ GKRSRLW   +V 
Sbjct: 310 TIIGLRVLKDKALIIEAKGSGRSIVSMHDLIQEMGWEIVREECVEDPGKRSRLWDPNDVH 369

Query: 328 HVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICN-------LQLPN 380
            VLT +TGT+ ++ I L N    +E++L  S + F +M  L+ LK          L LP 
Sbjct: 370 QVLTNNTGTKAIKSITL-NVSKFDELHL--SPQVFGRMQQLKFLKFTQHYGDEKILYLPQ 426

Query: 381 GLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILS 440
           GLE L N L L  W  YPLK LP +   +  +E+ + +SR+ +LW GI+++  LK + LS
Sbjct: 427 GLESLPNDLLLFQWVSYPLKSLPQSFCAENLVELKLTWSRVEKLWDGIQNIQHLKKIDLS 486

Query: 441 HSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKIL 500
           +S+ L+ +PDF+ A NLE++ L GC  L  +HPS+L  NKL+ LN+  C +L +L     
Sbjct: 487 YSKYLLDLPDFSKASNLEEIELFGCKSLLNVHPSILRLNKLVRLNLFYCKALTSLRSDTH 546

Query: 501 MKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLP 560
           ++SL  L L       SG   L    V+ D              ++ +L L  TAI  LP
Sbjct: 547 LRSLRDLFL-------SGCSRLEDFSVTSD--------------NMKDLALSSTAINELP 585

Query: 561 LSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKL--KKFPEIVRSMKDLS 618
            SI  L  L  L L  C+SL  LP  V +L+ LR+L + GC++L       ++  +  L 
Sbjct: 586 SSIGSLKNLETLTLDFCKSLNKLPNEVIDLRSLRALYVHGCTQLDASNLHILLSGLASLE 645

Query: 619 ELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLEN 677
            L L+   ++ E+P +I LL+ L  L L +  ++ R P+SI  L  L+ L++ GC +L+N
Sbjct: 646 TLKLEECRNLSEIPDNISLLSSLRELLLKE-TDIERFPASIKHLSKLEKLDVKGCRRLQN 704

Query: 678 VPETLGQIESLEELDISG 695
           +PE    ++ L   D S 
Sbjct: 705 MPELPPSLKELYATDCSS 722



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 169/562 (30%), Positives = 266/562 (47%), Gaps = 113/562 (20%)

Query: 492  LITLPGKILMKSLEKLNL-----KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHL 546
            L +LP     ++L +L L     + L   I  ++ L  +D+S      + P+  +   +L
Sbjct: 445  LKSLPQSFCAENLVELKLTWSRVEKLWDGIQNIQHLKKIDLSYSKYLLDLPDFSK-ASNL 503

Query: 547  SELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
             E+ L G  ++  +  SI  L+ LV LNL  C++L  L  + ++L+ LR L LSGCS+L+
Sbjct: 504  EEIELFGCKSLLNVHPSILRLNKLVRLNLFYCKALTSLR-SDTHLRSLRDLFLSGCSRLE 562

Query: 606  KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLK 665
             F     +MKDL+   L  T+I E+PSSI  L  LE L L  CK+L +LP+ +I L+SL+
Sbjct: 563  DFSVTSDNMKDLA---LSSTAINELPSSIGSLKNLETLTLDFCKSLNKLPNEVIDLRSLR 619

Query: 666  TLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLS 725
             L + GC                 +LD S   +                         LS
Sbjct: 620  ALYVHGC----------------TQLDASNLHI------------------------LLS 639

Query: 726  GLCSLRKLNLTDC-NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELE 784
            GL SL  L L +C NL E  +P +I  L SL+EL L +      P SI HLSKL  ++++
Sbjct: 640  GLASLETLKLEECRNLSE--IPDNISLLSSLRELLLKETDIERFPASIKHLSKLEKLDVK 697

Query: 785  DCKRLQSLPQLPPNIRQVRVNGCASLVTLL------DALKL--CKSDSTMIAC--LDSLK 834
             C+RLQ++P+LPP+++++    C+SL T++      D L+L   K  +    C  LD L 
Sbjct: 698  GCRRLQNMPELPPSLKELYATDCSSLETVMFNWNASDLLQLQAYKLHTQFQNCVNLDELS 757

Query: 835  L--------LGNKSLAFSML----REYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSI 882
            L        +  K LA++ L     ++L+        + V+ PGS++PEW MY+   +S+
Sbjct: 758  LRAIEVNAQVNMKKLAYNHLSTLGSKFLDG------PVDVIYPGSKVPEWLMYRTTEASV 811

Query: 883  TVTRPSNLYNKKKLVGYAICCVFHVL----KNSRGNNCFGSYPTHQLNCHIGHG-IYGIG 937
            TV   S    K K VG+  C V   L    KN  G +C+            G+G    +G
Sbjct: 812  TVDFSSA--PKSKFVGFIFCVVAGQLPSDDKNFIGCDCY---------LETGNGEKVSLG 860

Query: 938  FRDKF-----GQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHV-NVSFEPWLGQGL 991
              D +      +  SDH+++ Y     C     P + N++   ++++  VSFE +   G 
Sbjct: 861  SMDTWTSIHSSEFFSDHIFMWY-DELCCLQNSKPEKENMDELMASYIPKVSFEFFAQSGN 919

Query: 992  E--------VKMCGLHPVYMDE 1005
                     ++ CG+ P+Y  E
Sbjct: 920  TWKKRENNMIRGCGVCPIYDTE 941


>gi|357500665|ref|XP_003620621.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495636|gb|AES76839.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1057

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 260/632 (41%), Positives = 371/632 (58%), Gaps = 42/632 (6%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVREISS-KGGLVSLQRQLLSQLLKLADNSIWNVFDG 90
           KTT+A  +Y  ISH+F AS F+D+V +I       + +Q+Q+L Q L +    I N +  
Sbjct: 230 KTTLATTLYGQISHQFSASCFIDDVTKIYGLHDDPLDVQKQILFQTLGIEHQQICNRYHA 289

Query: 91  IDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEV 150
             ++  +L  ++ L+++D+V  V+QL+ +A +REW G GSRIII SRDEH+LK +GVD V
Sbjct: 290 TTLIQRKLCHERTLMILDNVDQVEQLEKIAVHREWLGPGSRIIIISRDEHVLKAYGVDVV 349

Query: 151 YKPHGLNYDEALQLFNMKAFKTYQPLQECVQ-LSARIIRYAGGLPLALEVLGSFLSGRSV 209
           YK   L+++EA  LF  KAFK  + +    Q L  +I+ YA GLPLA++VLGSFL GR+V
Sbjct: 350 YKVSLLDWNEAHMLFCRKAFKDEKIIMSNYQNLVDQILHYAKGLPLAIKVLGSFLFGRNV 409

Query: 210 DEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCG 269
            EW+S L RL   P  +++D+LQ+SFDGL E EK IFL IACFF  +  + V N L  CG
Sbjct: 410 TEWKSALTRLRQSPVKDVMDVLQLSFDGLNETEKDIFLHIACFFNNDSEEDVKNILNCCG 469

Query: 270 FHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHV 329
           FH  IG+RVLI+K L+++  + + MH LL+ELG++IVQ  S +E  K SRLW  E++  V
Sbjct: 470 FHADIGLRVLIDKSLVSISYSIINMHSLLEELGRKIVQNSSSKEPRKWSRLWSTEQLYDV 529

Query: 330 LTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICN-----LQLPNGLEY 384
           + E+     VE IVL  Y+ E+E    A  +  SKM+NLRLL I N     L  P+    
Sbjct: 530 MLENMEKH-VEAIVL--YYKEDEE---ADFEHLSKMSNLRLLFIANYISTMLGFPSC--- 580

Query: 385 LSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSEN 444
           LSN+LR + W  YP K+LPSN   ++ +E+ +  S I +LWK  K+L  L+ + L HS N
Sbjct: 581 LSNKLRFVHWFRYPSKYLPSNFHPNELVELILTESNIKQLWKNKKYLPNLRTLDLRHSRN 640

Query: 445 LIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKIL-MKS 503
           L ++ DF   PNLE+L LEGC  L E+ PS+ L  KL+ LN+KDC SL+++P  I  + S
Sbjct: 641 LEKIIDFGEFPNLERLDLEGCINLVELDPSIGLLRKLVYLNLKDCKSLVSIPNNIFGLSS 700

Query: 504 LEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSI 563
           L+ LN+       +  + L    +S + K +   +I E   H    HL G          
Sbjct: 701 LQYLNMCGCSKVFNNPRRLMKSGISSEKKQQH--DIRESASH----HLPG---------- 744

Query: 564 ELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLD 623
             L  ++L +     S  +LP ++ +L CLR + +S C  L   P+ +  +  L  L L 
Sbjct: 745 --LKWIILAH----DSSHMLP-SLHSLCCLRKVDISFCY-LSHVPDAIECLHWLERLNLA 796

Query: 624 GTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           G     +P S+  L+KL  LNL  CK L  LP
Sbjct: 797 GNDFVTLP-SLRKLSKLVYLNLEHCKLLESLP 827



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 222/504 (44%), Gaps = 92/504 (18%)

Query: 542  HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
            H   L EL L  + I+ L  + + L  L  L+L++ R+LE + +       L  L L GC
Sbjct: 603  HPNELVELILTESNIKQLWKNKKYLPNLRTLDLRHSRNLEKI-IDFGEFPNLERLDLEGC 661

Query: 602  SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
                                    ++ E+  SI LL KL  LNL DCK+LV +P++I  L
Sbjct: 662  -----------------------INLVELDPSIGLLRKLVYLNLKDCKSLVSIPNNIFGL 698

Query: 662  KSLKTLNLSGCFKLENVPETLGQ----IESLEELDISGTAVPH--STSWYSYIPINLMRK 715
             SL+ LN+ GC K+ N P  L +     E  ++ DI  +A  H     W       ++  
Sbjct: 699  SSLQYLNMCGCSKVFNNPRRLMKSGISSEKKQQHDIRESASHHLPGLKWI------ILAH 752

Query: 716  SVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHL 775
              +  LPSL  LC LRK++++ C L    +P  I  L  L+ L L+ N FV+LP S+  L
Sbjct: 753  DSSHMLPSLHSLCCLRKVDISFCYL--SHVPDAIECLHWLERLNLAGNDFVTLP-SLRKL 809

Query: 776  SKLLNIELEDCKRLQSLPQLPPNIRQVRVNG------CASLVTLLDALKLCKSDSTMIAC 829
            SKL+ + LE CK L+SLPQLP       V+       C + + + +  KL + +      
Sbjct: 810  SKLVYLNLEHCKLLESLPQLPFPTNTGEVHREYDDYFCGAGLLIFNCPKLGEREHC---- 865

Query: 830  LDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTR-PS 888
                     +S+    ++++++A   +   + +V PGSEIP W   Q  G SI + R P 
Sbjct: 866  ---------RSMTLLWMKQFIKANPRSSSEIQIVNPGSEIPSWINNQRMGYSIAIDRSPI 916

Query: 889  NLYNKKKLVGYAICCVFHVLKNSRG--------NNCFGSYPTHQLNCHIGHGIYGIGFRD 940
               N   ++G  +CC    +   R         N  F    +++    +      +  + 
Sbjct: 917  RHDNDNNIIG-IVCCAAFTMAPYREIFYSSELMNLAFKRIDSNERLLKM-----RVPVKL 970

Query: 941  KFGQAGSDHLWLLYLSRQ----TCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMC 996
                  S HLW++YL R+    +C++     +  L+ FE             +GLEV+ C
Sbjct: 971  SLVTTKSSHLWIIYLPREYPGYSCHEFG---KIELKFFEV------------EGLEVESC 1015

Query: 997  GLHPVYMDEVEELDQTTNQPSRFT 1020
            G   V   +++E +   N  +  T
Sbjct: 1016 GYRWVCKQDIQEFNLIMNHKNSLT 1039


>gi|255556649|ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223541425|gb|EEF42975.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 260/724 (35%), Positives = 424/724 (58%), Gaps = 31/724 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DSR   +   +   S DV +  I G+GG+GKTT+A+++++    +F+ + FL NVRE S
Sbjct: 200 IDSRIADINSWLQDDSKDVGIATIYGVGGIGKTTLAKIIFNQNFDKFDGASFLANVRETS 259

Query: 61  SK-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            +  GLV LQR++LS LLK   + I+NV +GI  +   + R++VLL++DD+  + Q  S+
Sbjct: 260 EQSNGLVRLQRKVLSDLLKGKTSKIYNVDEGIIKIKDAICRRRVLLILDDLDQLDQFNSI 319

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G +EWF  GS+II T+R E LL+ H V ++++ + L+ +E+LQLF+  +F    P++  
Sbjct: 320 IGMQEWFFPGSKIIATTRHERLLRAHEVSKLFRVNELDSNESLQLFSWHSFGQDHPVEVF 379

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            Q S R +    GLPLAL+VLGS LSG+S++ W S L++LE  P S+I  IL++S+D L+
Sbjct: 380 EQQSKRAVDLCSGLPLALQVLGSSLSGKSIEVWESALQKLEAVPDSKIQKILRVSYDSLE 439

Query: 240 -ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDL 297
            + +K +FLDIACFF G +++YV + L+GC F+ V+GI  LI +CL+T++  N L +H L
Sbjct: 440 DDHDKNLFLDIACFFTGMEKNYVISILQGCKFYAVVGINNLIGRCLLTINEGNKLIIHQL 499

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           L+++G++IV+++SPE+ GKRSR+W++++  ++L E+TGTE V+G+ LD      E     
Sbjct: 500 LRDMGREIVRQESPEDPGKRSRVWRDKDAFNLLRENTGTETVKGLTLD-LQMLKEANTDL 558

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
             KAF +M  L+LL++  ++L    E     L  L WRG+PL+ +P+N  +DK   + M 
Sbjct: 559 KTKAFGEMNKLKLLRLNCVKLSGDCEDFPKGLVWLFWRGFPLRCIPNNFHLDKLAVLDMR 618

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
            S +  +WKG + L  LK++ LSHS  L++ P+F G P+LE+L L+ C  L ++  S+  
Sbjct: 619 KSSLINVWKGTRLLVALKILNLSHSHCLVKTPNFMGLPSLERLKLKDCVNLIDLDESIGY 678

Query: 478 HNKLIILNMKDCTSLITLPGKI-LMKSLEKLN------LKSLPTTISGLKCLSTLDVSGD 530
             +LI+L+++ C ++  LP +I +++SLEKLN      L  LP  +  ++ L  L    D
Sbjct: 679 LRRLIVLDLRGCRNVKRLPVEIGMLESLEKLNLCGCSKLDQLPEEMRKMQSLKVLYADAD 738

Query: 531 LKFRE--FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS 588
               +   P  +  +  L  L L+G  I  +P SI  L+ L  L L  C  L+ LP   +
Sbjct: 739 CNLSDVAIPNDLRCLRSLESLDLKGNPIYSIPESINSLTTLQYLCLDKCTRLQSLPQLPT 798

Query: 589 NLKCLRSLKLSGCSKLKKFPEIVRSMKDLS-ELFLDGTSIKEVPSSIELL----TKLELL 643
           +L+    LK  GC+ L++   +   +  L  ELF  G  + EV    +L       +E++
Sbjct: 799 SLE---ELKAEGCTSLERITNLPNLLSTLQVELFGCGQLV-EVQGLFKLEPTINMDIEMM 854

Query: 644 NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTS 703
           N     N   L SS      +K  +     ++ + P+ L +   +    ++G  VPH   
Sbjct: 855 NGLGLHNFSTLGSS-----EMKMFSAIANREMRSPPQVLQEC-GIVSFFLAGNEVPH--- 905

Query: 704 WYSY 707
           W+ +
Sbjct: 906 WFDH 909



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 177/412 (42%), Gaps = 70/412 (16%)

Query: 637  LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
            L  LE L L DC NL+ L  SI  L+ L  L+L GC  ++ +P  +G +ESLE+L++ G 
Sbjct: 655  LPSLERLKLKDCVNLIDLDESIGYLRRLIVLDLRGCRNVKRLPVEIGMLESLEKLNLCGC 714

Query: 697  AVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLK 756
                  S    +P   MRK  +LK+               DCNL + A+P+D+  L SL+
Sbjct: 715  ------SKLDQLP-EEMRKMQSLKVLYADA----------DCNLSDVAIPNDLRCLRSLE 757

Query: 757  ELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCAS------- 809
             L L  N   S+P SI  L+ L  + L+ C RLQSLPQLP ++ +++  GC S       
Sbjct: 758  SLDLKGNPIYSIPESINSLTTLQYLCLDKCTRLQSLPQLPTSLEELKAEGCTSLERITNL 817

Query: 810  ----------------LVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAV 853
                            LV +    KL  + +  I  ++ L L    +L  S ++ +  A+
Sbjct: 818  PNLLSTLQVELFGCGQLVEVQGLFKLEPTINMDIEMMNGLGLHNFSTLGSSEMKMF-SAI 876

Query: 854  SNTRQH-----------LSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
            +N               +S  + G+E+P WF +++ GSS++ T   N  +  K+ G  +C
Sbjct: 877  ANREMRSPPQVLQECGIVSFFLAGNEVPHWFDHKSTGSSLSFT--INPLSDYKIRGLNLC 934

Query: 903  CVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYD 962
             V+         +  G Y          +  Y   F         D LWL Y      ++
Sbjct: 935  TVYARDHEVYWLHAAGHYARMNNETKGTNWSYSPTFYALPEDDDEDMLWLSYWKFGGEFE 994

Query: 963  IRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEELDQTTN 1014
            +             + VNVS    +  G  VK CG+  VY  E  E D  +N
Sbjct: 995  V------------GDKVNVSVR--MPFGYYVKECGIRIVY--EENEKDNQSN 1030


>gi|147771313|emb|CAN73963.1| hypothetical protein VITISV_034210 [Vitis vinifera]
          Length = 1384

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 258/674 (38%), Positives = 377/674 (55%), Gaps = 73/674 (10%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EKL+ +M++  + VR+IGICG GG+GKTTIA+ +Y+ IS++++ S FL NVRE  SKG  
Sbjct: 70  EKLKLMMNTELNKVRVIGICGPGGIGKTTIAQAIYNEISYQYDGSSFLRNVRE-RSKGDT 128

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
           + LQ +LL  +LK     I N+ +G++M+   L  K+VL++ DDV ++ QL+ LA  ++W
Sbjct: 129 LQLQNELLHGILKGKGFKISNIDEGVNMIKRCLNSKRVLVIFDDVDELTQLEYLADEKDW 188

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSAR 185
           F   S IIITSRD+ +L  +GVD  Y+ H  N  EA++LF++ AFK   P      LS  
Sbjct: 189 FKVKSTIIITSRDKQVLAQYGVDTPYEVHKFNEKEAIELFSLWAFKENLPKGAYKNLSYN 248

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           +I YA GLPLAL++LG+ L G+ + EW S L +L+  P  EI  +L+ISFDGL +++K+I
Sbjct: 249 MIEYADGLPLALKLLGASLFGKKISEWESALYKLKRIPHMEINKVLRISFDGLDDMDKEI 308

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQI 305
           FLD+ACFFKG D+D+V+  L   G H   GI  L +KCLIT+  N + MHDL+Q++G++I
Sbjct: 309 FLDVACFFKGKDKDFVSRIL---GPHAEYGIATLNDKCLITISKNMIDMHDLIQQMGREI 365

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKM 365
           ++++ PE+LG+RSR+W + +  +VLT + GT  ++ + L+        +   + ++F +M
Sbjct: 366 IRQECPEDLGRRSRIW-DSDAYNVLTRNMGTRAIKALFLNICKFNPTQF---TEESFKQM 421

Query: 366 TNLRLLKI---------------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
             LRLLKI                         LP   E+ S  L    W GY L+ LP+
Sbjct: 422 DGLRLLKIHKDDDYDRISIFRSYPHGKLFSEDHLPRDFEFPSYELTYFHWDGYSLESLPT 481

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
           N        + +  S I +LW+G K  +KLKV+ LS S +L  +PDF+  PNLE LIL+G
Sbjct: 482 NFHAKDLAALILRGSNIKQLWRGNKLHNKLKVINLSFSVHLTEIPDFSSVPNLEILILKG 541

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLST 524
           C                                          NL+ LP  I   K L T
Sbjct: 542 CE-----------------------------------------NLECLPRDIYKWKHLQT 560

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLP--LSIELLSGLVLLNLKNCRSLEI 582
           L      K + FPEI  +M  L EL L GTAI  LP   S E L  L +L+   C  L  
Sbjct: 561 LSCGECSKLKRFPEIKGNMRKLRELDLSGTAIEELPSSSSFEHLKALKILSFNRCSKLNK 620

Query: 583 LPVTVSNLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLE 641
           +P+ V  L  L  L LS C+ ++   P  +  +  L EL L     + +P++I  L++L+
Sbjct: 621 IPIDVCCLSSLEVLDLSYCNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINQLSRLQ 680

Query: 642 LLNLSDCKNLVRLP 655
           +LNLS C+NL  +P
Sbjct: 681 VLNLSHCQNLEHVP 694



 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 152/532 (28%), Positives = 239/532 (44%), Gaps = 125/532 (23%)

Query: 572  LNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP 631
            L L++C +L+ LP ++   K L++   SGCS+L+ FPEI+  M+ L +L LDG++IKE+P
Sbjct: 944  LCLRDCENLKSLPTSICEFKFLKTFSCSGCSQLESFPEILEDMEILEKLELDGSAIKEIP 1003

Query: 632  SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
            SSI+ L  L+ LNL+ C+NLV LP SI  L SLKTL ++ C +L+ +PE LG+++SLE L
Sbjct: 1004 SSIQRLRGLQDLNLAYCRNLVNLPESICNLTSLKTLTITSCPELKKLPENLGRLQSLESL 1063

Query: 692  DISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGN 751
             +                      S+  +LPSLS L  +                     
Sbjct: 1064 HVKDF------------------DSMNCQLPSLSVLLEI--------------------- 1084

Query: 752  LCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLV 811
                     + N   SLP  I+ L KL  ++L  CK LQ +P LP ++  V  + C SL 
Sbjct: 1085 --------FTTNQLRSLPDGISQLHKLGFLDLSHCKLLQHIPALPSSVTYVDAHQCTSL- 1135

Query: 812  TLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSE-IP 870
                     K  S+++                S ++E+++     R  + + +P S  IP
Sbjct: 1136 ---------KISSSLLW----------SPFFKSGIQEFVQ-----RNKVGIFLPESNGIP 1171

Query: 871  EWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHV--------LKNSRGNNC---FGS 919
            EW  +Q +GS IT+T P N Y     +G+A+C + HV        +K +R   C   F +
Sbjct: 1172 EWISHQKKGSKITLTLPQNWYENDDFLGFALCSL-HVPLDIEWTDIKEARNFICKLNFDN 1230

Query: 920  YPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHV 979
              +  +  ++    Y    RD      S+ LWL+   +       +P   +   +++  +
Sbjct: 1231 SASFVVR-NMQPQRYCESCRDG---DESNQLWLINYPKSI-----IPKRYHSNKYKT--L 1279

Query: 980  NVSFEPWLGQ-GLEVKMCGLHPVYMDEVEELDQTTNQPS--------RFTVYNLNEFD-- 1028
            N SFE +LG   ++V+ CG   +Y      L       S        R  V + N  D  
Sbjct: 1280 NASFENYLGTISVKVERCGFQLLYAYGQNHLTLVQGSSSSHGDLGSHRSAVQDTNACDNQ 1339

Query: 1029 -----QHFVGSKMI---VATTSKRSLTEYFGAEASGSGCCDDEEPQPKRFRE 1072
                  H   ++ +   V   +KR+  + +            EEPQ KRFRE
Sbjct: 1340 EGTEHNHPPMTQYVDHNVDAHNKRNPIDQYPV----------EEPQHKRFRE 1381



 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 151/330 (45%), Gaps = 79/330 (23%)

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLS-----------------------DCKNL 651
           KDL+ L L G++IK++    +L  KL+++NLS                        C+NL
Sbjct: 486 KDLAALILRGSNIKQLWRGNKLHNKLKVINLSFSVHLTEIPDFSSVPNLEILILKGCENL 545

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYI 708
             LP  I   K L+TL+   C KL+  PE  G +  L ELD+SGTA+   P S+S+    
Sbjct: 546 ECLPRDIYKWKHLQTLSCGECSKLKRFPEIKGNMRKLRELDLSGTAIEELPSSSSFEHLK 605

Query: 709 PINLM---RKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNS 764
            + ++   R S   K+P  +  L SL  L+L+ CN+MEG +PSDI  L SLKEL L  N 
Sbjct: 606 ALKILSFNRCSKLNKIPIDVCCLSSLEVLDLSYCNIMEGGIPSDICRLSSLKELNLKSND 665

Query: 765 FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDS 824
           F S+P +I  LS+L  + L  C+ L+ +P+LP ++R +  +G    ++    L       
Sbjct: 666 FRSIPATINQLSRLQVLNLSHCQNLEHVPELPSSLRLLDAHGPNLTLSTASFLPF----H 721

Query: 825 TMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
           +++ C +S                             +    +E+P+             
Sbjct: 722 SLVNCFNS----------------------------KIQRSETELPQ------------- 740

Query: 885 TRPSNLYNKKKLVGYAICCVFHVLKNSRGN 914
               N Y   + +G+AICCV+  L +   N
Sbjct: 741 ----NCYQNNEFLGFAICCVYVPLADEYEN 766



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 116/225 (51%), Gaps = 10/225 (4%)

Query: 508  NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
            NLKSLPT+I   K L T   SG  +   FPEI+E ME L +L L+G+AI+ +P SI+ L 
Sbjct: 951  NLKSLPTSICEFKFLKTFSCSGCSQLESFPEILEDMEILEKLELDGSAIKEIPSSIQRLR 1010

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSI 627
            GL  LNL  CR+L  LP ++ NL  L++L ++ C +LKK PE +  ++ L  L      +
Sbjct: 1011 GLQDLNLAYCRNLVNLPESICNLTSLKTLTITSCPELKKLPENLGRLQSLESLH-----V 1065

Query: 628  KEVPS-SIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIE 686
            K+  S + +L +   LL +     L  LP  I  L  L  L+LS C  L+++P     + 
Sbjct: 1066 KDFDSMNCQLPSLSVLLEIFTTNQLRSLPDGISQLHKLGFLDLSHCKLLQHIPALPSSVT 1125

Query: 687  SLEELDISGTAVPHSTSWYSYIPINL----MRKSVALKLPSLSGL 727
             ++    +   +  S  W  +    +     R  V + LP  +G+
Sbjct: 1126 YVDAHQCTSLKISSSLLWSPFFKSGIQEFVQRNKVGIFLPESNGI 1170



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 102/189 (53%), Gaps = 24/189 (12%)

Query: 566 LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT 625
           +  L +L LK C +LE LP  +   K L++L    CSKLK+FPEI  +M+ L EL L GT
Sbjct: 531 VPNLEILILKGCENLECLPRDIYKWKHLQTLSCGECSKLKRFPEIKGNMRKLRELDLSGT 590

Query: 626 SIKEVP--SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE-NVPETL 682
           +I+E+P  SS E L  L++L+ + C  L ++P  +  L SL+ L+LS C  +E  +P  +
Sbjct: 591 AIEELPSSSSFEHLKALKILSFNRCSKLNKIPIDVCCLSSLEVLDLSYCNIMEGGIPSDI 650

Query: 683 GQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLME 742
            ++ SL+EL++           +  IP             +++ L  L+ LNL+ C  +E
Sbjct: 651 CRLSSLKELNLKSND-------FRSIP------------ATINQLSRLQVLNLSHCQNLE 691

Query: 743 GA--LPSDI 749
               LPS +
Sbjct: 692 HVPELPSSL 700


>gi|357500591|ref|XP_003620584.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495599|gb|AES76802.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1392

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 266/643 (41%), Positives = 375/643 (58%), Gaps = 71/643 (11%)

Query: 1   MDSRCEKLR--FLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE 58
           +DSR E L+  FL+D     VR IGI GMGG+GKTT+A  +Y  I H F+AS F+D+V +
Sbjct: 198 IDSRLEALQNHFLLDMVDG-VRAIGIWGMGGIGKTTLAMNLYGQICHRFDASCFIDDVSK 256

Query: 59  ISS-KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
           I     G +  Q+Q+L Q L +  + I N +   D++ +RL R+K LL++D+V  V+QL+
Sbjct: 257 IFRLHDGPIDAQKQILHQTLGIEHHQICNHYSATDLIRNRLSREKTLLILDNVDQVEQLE 316

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
            +  +REW G+GSRI+I SRDEH+LK +GVD VYK   LN+ EA +LF  KAFK  + + 
Sbjct: 317 RIGVHREWLGAGSRIVIISRDEHILKEYGVDVVYKVPLLNWAEAHKLFCRKAFKAEKIIM 376

Query: 178 ECVQ-LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
              + L+  I+RYA GLPLA++VLGS+L GR+V EW+STL  L   P ++++D+LQ+SFD
Sbjct: 377 SNYKNLANEILRYANGLPLAIKVLGSYLFGRNVTEWKSTLASLRESPDNDVMDVLQLSFD 436

Query: 237 GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
           GL+E+EK+IFLDIACF    +  YV N L  CGFH  IG+ VLI K LI++ N+ + MH 
Sbjct: 437 GLKEMEKEIFLDIACFSTFRNEKYVKNILNCCGFHADIGLSVLIAKSLISISNSRIIMHS 496

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LLQELG++IVQ  S +E  K SRLW  ++  +V  E+   + V+ IVLD+          
Sbjct: 497 LLQELGRKIVQNSSCKEPRKWSRLWSAKQFYNVKMENMEKQ-VKAIVLDDEE-------- 547

Query: 357 ASAKAFSKMTNLRLLKI-CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
              +  SKM+NLRLL I   + +      LSN+LR + W  YP K+LPS+   ++ +E+ 
Sbjct: 548 VDVEQLSKMSNLRLLIIRYGMYISGSPSCLSNKLRYVEWDEYPSKYLPSSFHPNELVELI 607

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           +  S I +LWK  K+L  L+ + LSHS  L ++ DF   PNLE L LEGCT L E+ PS+
Sbjct: 608 LVKSNITQLWKNKKYLPNLRTLDLSHSIELEKIIDFGEFPNLEWLNLEGCTNLVELDPSI 667

Query: 476 LLHNKLIILNMKDCTSLITLPGKIL-MKSLEKLNLK------------------------ 510
            L   L+ LN+++C +L+++P  I  + SLE LN+                         
Sbjct: 668 GLLRNLVYLNLENCYNLVSIPNTIFGLGSLEDLNISCCSKVFNKPIHLEKNKKRHYITES 727

Query: 511 ----------------------SLPTT-------ISGLKCLSTLDVSGDLKFREFPEIVE 541
                                 S PTT       +  L CL  +D+S     R+ P  +E
Sbjct: 728 ASHSRSTSSVFEWTMLPHHSSFSAPTTHTSLLPSLRSLHCLRNVDISF-CYLRQVPGTIE 786

Query: 542 HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
            +  L  L+L G     LP S+  LS LV LNL++CR LE LP
Sbjct: 787 CLHWLERLNLGGNDFVTLP-SLRKLSKLVYLNLEHCRLLESLP 828



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 207/448 (46%), Gaps = 64/448 (14%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
            LR+L LS   +L+K  +      +L  L L+G T++ E+  SI LL  L  LNL +C NL
Sbjct: 626  LRTLDLSHSIELEKIIDF-GEFPNLEWLNLEGCTNLVELDPSIGLLRNLVYLNLENCYNL 684

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD------------ISGTAVP 699
            V +P++I  L SL+ LN+S C K+ N P  L + +    +                T +P
Sbjct: 685  VSIPNTIFGLGSLEDLNISCCSKVFNKPIHLEKNKKRHYITESASHSRSTSSVFEWTMLP 744

Query: 700  HSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELY 759
            H +S+ +      +       LPSL  L  LR ++++ C L +  +P  I  L  L+ L 
Sbjct: 745  HHSSFSAPTTHTSL-------LPSLRSLHCLRNVDISFCYLRQ--VPGTIECLHWLERLN 795

Query: 760  LSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPP------NIRQVRVNGCASLVTL 813
            L  N FV+LP S+  LSKL+ + LE C+ L+SLPQLP       + R+        LV +
Sbjct: 796  LGGNDFVTLP-SLRKLSKLVYLNLEHCRLLESLPQLPSPTSIGRDHREKEYKLNTGLV-I 853

Query: 814  LDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTR----QHLSVVVPGSEI 869
             +  KL + +                S+ FS   ++++A   +         +V PG+EI
Sbjct: 854  FNCPKLGERERC-------------SSMTFSWTTQFIQAYQQSYPTYLDEFQIVSPGNEI 900

Query: 870  PEWFMYQNEGSSITVTRPSNLY-NKKKLVGYAICCVFHVLKNSRGN----NCFGSYPTHQ 924
            P W   Q+ G SI V +   ++ N   ++G+  C VF +  + R N    + +      +
Sbjct: 901  PSWINNQSMGDSIPVDQTPIMHDNNNNIIGFLCCVVFSMTPSRRSNIDPRSIYMEIGGTR 960

Query: 925  LNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFE 984
                +   + G+ F D      S HLWL+YL R++ Y     ++     F  N ++    
Sbjct: 961  KRIWLPVRVAGM-FTDDLITMKSSHLWLIYLPRES-YHKFAGIKRVAGMFLGNKLS---- 1014

Query: 985  PWLGQGLEVKMCGLHPVYMDEVEELDQT 1012
                 G+EVK CG H V   +++E + T
Sbjct: 1015 -----GMEVKSCGYHWVCKQDLQEFNLT 1037


>gi|296089468|emb|CBI39287.3| unnamed protein product [Vitis vinifera]
          Length = 1166

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 277/716 (38%), Positives = 409/716 (57%), Gaps = 63/716 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D+R ++++  +   S DV MIGI GMGG+GKTT+AR +Y+ IS +FEA  FL++V ++ 
Sbjct: 249 IDARIQEIKMRLRLESDDVGMIGIWGMGGIGKTTLARALYNEISRQFEAHSFLEDVGKVL 308

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +  GL+ LQ+  LS LL+  D ++     G+  + +RL  KKVL+V+D+V D    + L 
Sbjct: 309 ANEGLIKLQQIFLSSLLEEKDLNM----KGLTSIKARLHSKKVLVVLDNVNDPTIFECLI 364

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           GN++WFG GSRIIIT+RD+ L+ +HGVD  Y+    N DEA +     + K      + +
Sbjct: 365 GNQDWFGRGSRIIITARDKCLI-SHGVD-YYEVPKFNSDEAYEFIKCHSLKHELLRGDFM 422

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS  +I YA GLPLAL+VL   L   S +E R+ L++L+     +I ++L+IS+DGL +
Sbjct: 423 ELSTSMIGYAQGLPLALKVLRPILFSMSKEESRNQLDKLKSTLNKKIEEVLRISYDGLDD 482

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            EK IFLDIACFFKG D+DYV   L+GCGF P+ GIR LI+K LI+++ N   MHDL+QE
Sbjct: 483 KEKNIFLDIACFFKGEDKDYVIEILDGCGFFPLCGIRSLIDKSLISIYGNKFQMHDLIQE 542

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G +IV++QS +ELGKRSRL   E++  VL ++TG+E +EGI L+ +H +  +    + +
Sbjct: 543 MGLEIVRQQSLQELGKRSRLLFHEDIYDVLKKNTGSEKIEGIFLNLFHLQETIDF--TTQ 600

Query: 361 AFSKMTNLRLLKICN------------------LQLPNGLEYLSNRLRLLGWRGYPLKFL 402
           AF+ M+ LRLLK+                    ++  +  ++  + LR L   GY LK L
Sbjct: 601 AFAGMSKLRLLKVYQSDKISRNSEDTFMKENFKVRFSSNFKFCYDELRYLDLYGYSLKSL 660

Query: 403 PSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
           P++      + + M  SRI +LWKGIK L+KLK M LSHS+ LI  P+ +   NLE+L+L
Sbjct: 661 PNDFNAKNLVHLSMPCSRIEQLWKGIKVLEKLKRMDLSHSKYLIETPNLSRVTNLERLVL 720

Query: 463 EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCL 522
           E C  L ++HPSL     L  L++K+C                   LKSLP+    LK L
Sbjct: 721 EDCVSLCKVHPSLRDLKNLKFLSLKNCKM-----------------LKSLPSGPYDLKSL 763

Query: 523 STLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCR---- 578
             L +SG  KF +F E   ++E L EL+ +GTA+R LP S+ L   LV+L+L+ C+    
Sbjct: 764 EILILSGCSKFEQFLENFGNLEMLKELYADGTALRELPSSLSLSRNLVILSLEGCKGPPS 823

Query: 579 SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSE------------LFLDGTS 626
           +    P   SN    R   LSG   L        ++ D +             L L G +
Sbjct: 824 ASWWFPRRSSNSTGFRLHNLSGLCSLSTLNLSYCNLSDETNLSSLVLLSSLEYLHLCGNN 883

Query: 627 IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
              +P ++  L++LE + L +C  L  LP       S+  L+   C  L+NV   L
Sbjct: 884 FVTLP-NLSRLSRLEDVQLENCTRLQELPD---LPSSIGLLDARNCTSLKNVQSHL 935



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 123/385 (31%), Positives = 182/385 (47%), Gaps = 61/385 (15%)

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           + L  L L G +++ LP        LV L++  C  +E L   +  L+ L+ + LS    
Sbjct: 645 DELRYLDLYGYSLKSLPNDFNA-KNLVHLSMP-CSRIEQLWKGIKVLEKLKRMDLSHSKY 702

Query: 604 LKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
           L + P + R + +L  L L D  S+ +V  S+  L  L+ L+L +CK L  LPS    LK
Sbjct: 703 LIETPNLSR-VTNLERLVLEDCVSLCKVHPSLRDLKNLKFLSLKNCKMLKSLPSGPYDLK 761

Query: 663 SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV-----------------------P 699
           SL+ L LSGC K E   E  G +E L+EL   GTA+                       P
Sbjct: 762 SLEILILSGCSKFEQFLENFGNLEMLKELYADGTALRELPSSLSLSRNLVILSLEGCKGP 821

Query: 700 HSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELY 759
            S SW  + P      S   +L +LSGLCSL  LNL+ CNL +    S +  L SL+ L+
Sbjct: 822 PSASW--WFP-RRSSNSTGFRLHNLSGLCSLSTLNLSYCNLSDETNLSSLVLLSSLEYLH 878

Query: 760 LSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKL 819
           L  N+FV+LP +++ LS+L +++LE+C RLQ LP LP +I  +    C SL  +   LK 
Sbjct: 879 LCGNNFVTLP-NLSRLSRLEDVQLENCTRLQELPDLPSSIGLLDARNCTSLKNVQSHLK- 936

Query: 820 CKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEG 879
               + +I  L+   +LG                      L  + PGS +P+W  Y++ G
Sbjct: 937 ----NRVIRVLN--LVLG----------------------LYTLTPGSRLPDWIRYKSSG 968

Query: 880 SSITVTRPSNLYNKKKLVGYAICCV 904
             +    P N +N    +G+    V
Sbjct: 969 MEVIAELPPNWFN-SNFLGFWFAIV 992


>gi|357486227|ref|XP_003613401.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355514736|gb|AES96359.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 976

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 246/566 (43%), Positives = 350/566 (61%), Gaps = 23/566 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++SR EKL   +   +  V ++GI GMGG+GK+TIA+VVY+ + +EFE   FL N+R++ 
Sbjct: 42  LESRAEKLIQFLRKNTRGVCLVGIWGMGGIGKSTIAKVVYNNLCYEFEDQSFLANIRQVW 101

Query: 61  SKG-GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            K  G + LQ QLLS +LK  +  + NV  G  M+  RL  K+ L+++DDV   +QL +L
Sbjct: 102 EKERGQIDLQEQLLSDILKTRNVKVHNVEWGKAMINERLCTKRALVILDDVSTREQLNAL 161

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            GNR   G GS IIIT+RD  LL   GVD +Y+  GLN  E+ +LFN  AFK   P +  
Sbjct: 162 CGNRNGIGPGSIIIITTRDARLLDILGVDFIYEAEGLNVHESRRLFNWHAFKEANPSEAF 221

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           + LS  ++ Y GGLPLALEVLGS+L  R   EW+S + +L+  P  +I + L+ISFDGL+
Sbjct: 222 LILSGDVVSYCGGLPLALEVLGSYLFNRRKREWQSVISKLQKIPNDQIHEKLKISFDGLE 281

Query: 240 E-LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDL 297
           + +EK IFLD+ CFF G DR YVT  L GCG H  IGI VLIE+ L+ V  NN L MH L
Sbjct: 282 DHMEKNIFLDVCCFFIGKDRAYVTEILNGCGLHADIGIEVLIERSLLKVEKNNKLGMHAL 341

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           L+++G++IV+  SPEE  KR+RLW  E+V  VL E TGT+ +EG+VL +   +    +C 
Sbjct: 342 LRDMGREIVRESSPEEPEKRTRLWCFEDVVDVLAEQTGTKAIEGLVLKS---QRTSRVCF 398

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
           +  A  KM  LRLL++ N+Q+    E  S +LR L W+G+PLK++P N      + + + 
Sbjct: 399 NTIALKKMKKLRLLQLDNVQVIGDYECFSKQLRWLSWQGFPLKYMPENFYQKNVVAMDLK 458

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
           +S + ++WK  + ++ LK++ LSHS+ L R PDF+  PNLEKLI++ C  L E+HPS+  
Sbjct: 459 HSNLTQVWKKPQLIEGLKILNLSHSKYLKRTPDFSKLPNLEKLIMKDCQSLLEVHPSIGD 518

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
            N L+++N+KDCTSL  LP +I                   L+ + TL +SG  K  +  
Sbjct: 519 LNNLLLINLKDCTSLSNLPREIYQ-----------------LRTVKTLILSGCSKIDKLD 561

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSI 563
           E +  ME L  L    T ++ +P SI
Sbjct: 562 EDILQMESLKTLMAANTRVKQVPFSI 587



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 153/329 (46%), Gaps = 34/329 (10%)

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDC 648
           ++ L+ L LS    LK+ P+  + + +L +L + D  S+ EV  SI  L  L L+NL DC
Sbjct: 472 IEGLKILNLSHSKYLKRTPDFSK-LPNLEKLIMKDCQSLLEVHPSIGDLNNLLLINLKDC 530

Query: 649 KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI 708
            +L  LP  I  L+++KTL LSGC K++ + E + Q+ESL+ L  + T V         +
Sbjct: 531 TSLSNLPREIYQLRTVKTLILSGCSKIDKLDEDILQMESLKTLMAANTRVKQ-------V 583

Query: 709 PINLMR-KSVA-LKLPSLSGLC-----SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLS 761
           P +++R KS+  + L    GL      SL +  ++        +P   G   SL  L + 
Sbjct: 584 PFSIVRSKSIGYISLCGYKGLSHDVFPSLIRSWISPAMNSLPCIPPFGGMSKSLASLDIE 643

Query: 762 KNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDA--LKL 819
            N+       +   S++LN     C RL+S+     +  Q++      L  L DA   ++
Sbjct: 644 SNNL-----DLVSQSQILN----SCSRLRSVSVQCDSEIQLKQEFRRFLDNLYDAGLTEV 694

Query: 820 CKSDSTMIACLDSLKLL---GNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQ 876
             S +  I+ L    LL   G+  +  + L + L     T  +L   +PG   P W  Y+
Sbjct: 695 GTSQALQISDLFMRSLLFGIGSCHIVINTLGKSLSRGLTT--NLGDSLPGDNYPSWLAYK 752

Query: 877 NEGSSITVTRPSNLYNKKKLVGYAICCVF 905
            EG S+    P +  +   + G A+C ++
Sbjct: 753 GEGPSVLFQVPKD--SDSCMKGIALCVLY 779


>gi|359493220|ref|XP_002264441.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1481

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 258/674 (38%), Positives = 377/674 (55%), Gaps = 73/674 (10%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EKL+ +M++  + VR+IGICG GG+GKTTIA+ +Y+ IS++++ S FL NVRE  SKG  
Sbjct: 204 EKLKLMMNTELNKVRVIGICGPGGIGKTTIAQAIYNEISYQYDGSSFLRNVRE-RSKGDT 262

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
           + LQ +LL  +LK     I N+ +G++M+   L  K+VL++ DDV ++ QL+ LA  ++W
Sbjct: 263 LQLQNELLHGILKGKGFKISNIDEGVNMIKRCLNSKRVLVIFDDVDELTQLEYLADEKDW 322

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSAR 185
           F   S IIITSRD+ +L  +GVD  Y+ H  N  EA++LF++ AFK   P      LS  
Sbjct: 323 FKVKSTIIITSRDKQVLAQYGVDTPYEVHKFNEKEAIELFSLWAFKENLPKGAYKNLSYN 382

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           +I YA GLPLAL++LG+ L G+ + EW S L +L+  P  EI  +L+ISFDGL +++K+I
Sbjct: 383 MIEYADGLPLALKLLGASLFGKKISEWESALYKLKRIPHMEINKVLRISFDGLDDMDKEI 442

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQI 305
           FLD+ACFFKG D+D+V+  L   G H   GI  L +KCLIT+  N + MHDL+Q++G++I
Sbjct: 443 FLDVACFFKGKDKDFVSRIL---GPHAEYGIATLNDKCLITISKNMIDMHDLIQQMGREI 499

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKM 365
           ++++ PE+LG+RSR+W + +  +VLT + GT  ++ + L+        +   + ++F +M
Sbjct: 500 IRQECPEDLGRRSRIW-DSDAYNVLTRNMGTRAIKALFLNICKFNPTQF---TEESFKQM 555

Query: 366 TNLRLLKI---------------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
             LRLLKI                         LP   E+ S  L    W GY L+ LP+
Sbjct: 556 DGLRLLKIHKDDDYDRISIFRSYPHGKLFSEDHLPRDFEFPSYELTYFHWDGYSLESLPT 615

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
           N        + +  S I +LW+G K  +KLKV+ LS S +L  +PDF+  PNLE LIL+G
Sbjct: 616 NFHAKDLAALILRGSNIKQLWRGNKLHNKLKVINLSFSVHLTEIPDFSSVPNLEILILKG 675

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLST 524
           C                                          NL+ LP  I   K L T
Sbjct: 676 CE-----------------------------------------NLECLPRDIYKWKHLQT 694

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLP--LSIELLSGLVLLNLKNCRSLEI 582
           L      K + FPEI  +M  L EL L GTAI  LP   S E L  L +L+   C  L  
Sbjct: 695 LSCGECSKLKRFPEIKGNMRKLRELDLSGTAIEELPSSSSFEHLKALKILSFNRCSKLNK 754

Query: 583 LPVTVSNLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLE 641
           +P+ V  L  L  L LS C+ ++   P  +  +  L EL L     + +P++I  L++L+
Sbjct: 755 IPIDVCCLSSLEVLDLSYCNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINQLSRLQ 814

Query: 642 LLNLSDCKNLVRLP 655
           +LNLS C+NL  +P
Sbjct: 815 VLNLSHCQNLEHVP 828



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 165/331 (49%), Gaps = 45/331 (13%)

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLS-----------------------DCKNL 651
           KDL+ L L G++IK++    +L  KL+++NLS                        C+NL
Sbjct: 620 KDLAALILRGSNIKQLWRGNKLHNKLKVINLSFSVHLTEIPDFSSVPNLEILILKGCENL 679

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYI 708
             LP  I   K L+TL+   C KL+  PE  G +  L ELD+SGTA+   P S+S+    
Sbjct: 680 ECLPRDIYKWKHLQTLSCGECSKLKRFPEIKGNMRKLRELDLSGTAIEELPSSSSFEHLK 739

Query: 709 PINLM---RKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNS 764
            + ++   R S   K+P  +  L SL  L+L+ CN+MEG +PSDI  L SLKEL L  N 
Sbjct: 740 ALKILSFNRCSKLNKIPIDVCCLSSLEVLDLSYCNIMEGGIPSDICRLSSLKELNLKSND 799

Query: 765 FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDS 824
           F S+P +I  LS+L  + L  C+ L+ +P+LP ++R +  +G    ++    L       
Sbjct: 800 FRSIPATINQLSRLQVLNLSHCQNLEHVPELPSSLRLLDAHGPNLTLSTASFLPF----H 855

Query: 825 TMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSE-IPEWFMYQNEGSSIT 883
           +++ C +S      K    S    Y    +   + + +V+P S  +PEW M Q   + + 
Sbjct: 856 SLVNCFNS------KIQDLSWSSCYYSDSTYRGKGICIVLPRSSGVPEWIMDQRSETEL- 908

Query: 884 VTRPSNLYNKKKLVGYAICCVFHVLKNSRGN 914
              P N Y   + +G+AICCV+  L +   N
Sbjct: 909 ---PQNCYQNNEFLGFAICCVYVPLADEYEN 936



 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 59/122 (48%), Positives = 88/122 (72%)

Query: 572  LNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP 631
            L L++C +L+ LP ++   K L++   SGCS+L+ FPEI+  M+ L +L LDG++IKE+P
Sbjct: 1114 LCLRDCENLKSLPTSICEFKFLKTFSCSGCSQLESFPEILEDMEILEKLELDGSAIKEIP 1173

Query: 632  SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
            SSI+ L  L+ LNL+ C+NLV LP SI  L SLKTL ++ C +L+ +PE LG+++SLE L
Sbjct: 1174 SSIQRLRGLQDLNLAYCRNLVNLPESICNLTSLKTLTITSCPELKKLPENLGRLQSLESL 1233

Query: 692  DI 693
             +
Sbjct: 1234 HV 1235



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/134 (42%), Positives = 83/134 (61%), Gaps = 2/134 (1%)

Query: 508  NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
            NLKSLPT+I   K L T   SG  +   FPEI+E ME L +L L+G+AI+ +P SI+ L 
Sbjct: 1121 NLKSLPTSICEFKFLKTFSCSGCSQLESFPEILEDMEILEKLELDGSAIKEIPSSIQRLR 1180

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTS 626
            GL  LNL  CR+L  LP ++ NL  L++L ++ C +LKK PE +  ++ L  L + D  S
Sbjct: 1181 GLQDLNLAYCRNLVNLPESICNLTSLKTLTITSCPELKKLPENLGRLQSLESLHVKDFDS 1240

Query: 627  IK-EVPSSIELLTK 639
            +  ++PS  E + +
Sbjct: 1241 MNCQLPSLSEFVQR 1254



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 200/480 (41%), Gaps = 130/480 (27%)

Query: 625  TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQ 684
            + ++E+P  IE   +L+ L L DC+NL  LP+SI   K LKT + SGC +LE+ PE L  
Sbjct: 1097 SDMQELPI-IENPLELDGLCLRDCENLKSLPTSICEFKFLKTFSCSGCSQLESFPEILED 1155

Query: 685  IESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDC-NLMEG 743
            +E LE+L++ G+A+         IP ++ R            L  L+ LNL  C NL+  
Sbjct: 1156 MEILEKLELDGSAIKE-------IPSSIQR------------LRGLQDLNLAYCRNLVN- 1195

Query: 744  ALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR 803
             LP  I NL SLK L +         TS   L KL     E+  RLQSL           
Sbjct: 1196 -LPESICNLTSLKTLTI---------TSCPELKKL----PENLGRLQSL----------- 1230

Query: 804  VNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVV 863
                               +S  +   DS+      +     L E+++     R  + + 
Sbjct: 1231 -------------------ESLHVKDFDSM------NCQLPSLSEFVQ-----RNKVGIF 1260

Query: 864  VPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHV--------LKNSRGN 914
            +P S  IPEW  +Q +GS IT+T P N Y     +G+A+C + HV        +K +R  
Sbjct: 1261 LPESNGIPEWISHQKKGSKITLTLPQNWYENDDFLGFALCSL-HVPLDIEWTDIKEARNF 1319

Query: 915  NC---FGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNL 971
             C   F +  +  +  ++    Y    RD      S+ LWL+   +       +P   + 
Sbjct: 1320 ICKLNFDNSASFVVR-NMQPQRYCESCRDG---DESNQLWLINYPKSI-----IPKRYHS 1370

Query: 972  EPFESNHVNVSFEPWLGQ-GLEVKMCGLHPVYMDEVEELDQTTNQPS--------RFTVY 1022
              +++  +N SFE +LG   ++V+ CG   +Y      L       S        R  V 
Sbjct: 1371 NKYKT--LNASFENYLGTISVKVERCGFQLLYAYGQNHLTLVQGSSSSHGDLGSHRSAVQ 1428

Query: 1023 NLNEFD-------QHFVGSKMI---VATTSKRSLTEYFGAEASGSGCCDDEEPQPKRFRE 1072
            + N  D        H   ++ +   V   +KR+  + +            EEPQ KRFRE
Sbjct: 1429 DTNACDNQEGTEHNHPPMTQYVDHNVDAHNKRNPIDQYPV----------EEPQHKRFRE 1478


>gi|82542041|gb|ABB82028.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 885

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 252/667 (37%), Positives = 385/667 (57%), Gaps = 27/667 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD     +   + + + DVR++GI GM G+GKTTIA+VV++ + + FE S F  N+ E S
Sbjct: 136 MDRLSRNIFDFLSTATHDVRIVGIHGMPGIGKTTIAKVVFNQLRYRFEGSCFFSNINETS 195

Query: 61  SK-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            +  GL  LQ QLL  +LK    +I  V  G  ++  RL+RK+VL+V DDV    QL +L
Sbjct: 196 KQFNGLALLQEQLLHDILKQDVANINCVDRGKVLIKERLRRKRVLVVADDVTRQDQLNAL 255

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G R WFG GSR+IIT+RD   L  H  D+ Y+   L  DE+ QLF+  A +  +P ++ 
Sbjct: 256 MGERGWFGPGSRVIITTRDSSFL--HKADQTYQIEELKPDESFQLFSWHALRDTKPAEDY 313

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           ++LS  ++ Y GG+PLALEV+G+ LSG++ D W+S +++L   P  +I   L+ISFD L 
Sbjct: 314 IELSKDVVDYCGGIPLALEVMGACLSGKNRDGWKSVIDKLRRIPNRDIQGKLRISFDALD 373

Query: 240 ELE-KKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNNTLWMHDL 297
             E +  FLDIACFF    ++YV   L   CG++P + ++ L E+ LI V   T+ MHDL
Sbjct: 374 GEELQNAFLDIACFFIDRKKEYVAKVLGARCGYNPEVDLQTLHERSLIKVLGETVTMHDL 433

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           L+++G+++V+ +SP++ G+R+R+W +E+  +VL +  GT++VEG+ LD    E +     
Sbjct: 434 LRDMGREVVREKSPKQPGERTRIWNQEDAWNVLEQQKGTDVVEGLALDVRASEAK---SL 490

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
           SA +F++M  L LL+I  + L    + LS  L  + W   PLK+ PS+  +D    + M 
Sbjct: 491 SAGSFAEMKCLNLLQINGVHLTGSFKLLSKELMWICWLQCPLKYFPSDFTLDNLAVLDMQ 550

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
           YS + ELWKG K L++LK++ LSHS++LI+ P+   + +LEKLIL+GC+ L E+H S+  
Sbjct: 551 YSNLKELWKGKKILNRLKILNLSHSQHLIKTPNLHSS-SLEKLILKGCSSLVEVHQSIEN 609

Query: 478 HNKLIILNMKDCTSLITLPGKI-LMKSLEKLN------LKSLPTTISGLKCLSTLDVSGD 530
              L+ LN+K C  L  LP +I  +KSL+ LN      L+ LP  +  ++ L+ L   G 
Sbjct: 610 LTSLVFLNLKGCWRLKNLPERIGNVKSLKTLNISGCSQLEKLPERMGDMESLTKLLADG- 668

Query: 531 LKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
           ++  +F   +  ++H   L L G +    P S  L+S  V LN K       LP +    
Sbjct: 669 IENEQFLSSIGQLKHCRRLSLHGDS--STPPSSSLISTGV-LNWKRW-----LPASFIEW 720

Query: 591 KCLRSLKLSGCSKLKKFPEIV--RSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDC 648
             ++ L+LS      +    V    +  L +L L G     +PS I  L KL  L++  C
Sbjct: 721 ISVKHLELSNSGLSDRATNCVDFSGLSALEKLDLTGNKFSRLPSGIGFLPKLTYLSVEGC 780

Query: 649 KNLVRLP 655
           K LV +P
Sbjct: 781 KYLVSIP 787



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/268 (34%), Positives = 127/268 (47%), Gaps = 42/268 (15%)

Query: 579 SLEILPVTVSNLK----------CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSI 627
           +L +L +  SNLK           L+ L LS    L K P +  S   L +L L G +S+
Sbjct: 543 NLAVLDMQYSNLKELWKGKKILNRLKILNLSHSQHLIKTPNLHSS--SLEKLILKGCSSL 600

Query: 628 KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
            EV  SIE LT L  LNL  C  L  LP  I  +KSLKTLN+SGC +LE +PE +G +ES
Sbjct: 601 VEVHQSIENLTSLVFLNLKGCWRLKNLPERIGNVKSLKTLNISGCSQLEKLPERMGDMES 660

Query: 688 LEELDISG------------------------TAVPHSTSWYSYIPINLMRKSVALKLPS 723
           L +L   G                        ++ P S+S  S   +N  R   A    S
Sbjct: 661 LTKLLADGIENEQFLSSIGQLKHCRRLSLHGDSSTPPSSSLISTGVLNWKRWLPA----S 716

Query: 724 LSGLCSLRKLNLTDCNLMEGALPS-DIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIE 782
                S++ L L++  L + A    D   L +L++L L+ N F  LP+ I  L KL  + 
Sbjct: 717 FIEWISVKHLELSNSGLSDRATNCVDFSGLSALEKLDLTGNKFSRLPSGIGFLPKLTYLS 776

Query: 783 LEDCKRLQSLPQLPPNIRQVRVNGCASL 810
           +E CK L S+P LP ++  +    C SL
Sbjct: 777 VEGCKYLVSIPDLPSSLGHLFACDCKSL 804


>gi|255564962|ref|XP_002523474.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223537302|gb|EEF38933.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1091

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 264/625 (42%), Positives = 358/625 (57%), Gaps = 48/625 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DS  E++  L+  GS DVR IGI GMGG+GKTTIA  ++  IS +F    FL NVRE S
Sbjct: 195 IDSHIEQILLLLCIGSLDVRFIGIWGMGGIGKTTIAEAIFSRISDQFAGCCFLSNVREKS 254

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           SK GL+ L+R + S+LL     SI         +  RL+RKKV++ +DDV D +QL++LA
Sbjct: 255 SKLGLIHLKRDMYSKLLGDEKLSIEMSHALPTFVVDRLRRKKVIVFLDDVNDSEQLEALA 314

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           GN  WFG GSR+I+T RD+ +L+   VDE+YK  GLN++++L+L +MKAFK  QP  +  
Sbjct: 315 GNHVWFGPGSRVIVTGRDKEVLQCK-VDEIYKVEGLNHNDSLRLLSMKAFKEKQPPNDYA 373

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS  ++ YA G+PLAL+VLGS L  RS  EW + L +L+  P S I  IL+IS+D L +
Sbjct: 374 KLSEMVVNYAQGVPLALKVLGSHLYKRSQKEWETMLNKLKQFPDSNIQKILEISYDELDQ 433

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
           +EK IFLDIACFFKG ++D + + LEGCGF    GI  L EKCL+T+ NN L MHDL+QE
Sbjct: 434 MEKDIFLDIACFFKGCEKDKIEDILEGCGFAAEWGILRLTEKCLVTIQNNRLEMHDLIQE 493

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G  I +R       K SRLW  +++CH+L    G + VEGI LD      ++ L  +  
Sbjct: 494 MGLHIAKR-------KGSRLWNSQDICHMLMTDMGKKKVEGIFLD-MSKTGKIRL--NHA 543

Query: 361 AFSKMTNLRLLK---------------ICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSN 405
            FS+M  LRLLK               I      N LE LSNRL LL W  YP K L SN
Sbjct: 544 TFSRMPMLRLLKFYRTWSSPRSQDAVFIVKSAESNCLEGLSNRLSLLHWEEYPCKSLCSN 603

Query: 406 LQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
             M+  +E+ M  S I +LW   +   KL+ + LS S NL R+PD +   NL  + L GC
Sbjct: 604 FFMENLVELNMPRSNIEQLWNDNEGPPKLRRLDLSKSVNLKRLPDLSSTTNLTSIELWGC 663

Query: 466 TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTL 525
             L EI  S+    KL  LN+ +C  L +LP  I ++SL  L+L   P            
Sbjct: 664 ESLLEIPSSVQKCKKLYSLNLDNCKELRSLPSLIQLESLSILSLACCPN----------- 712

Query: 526 DVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPV 585
                   +  P+I   ++ LS   L  + +   P S+  L  L   ++  C++L  LP 
Sbjct: 713 -------LKMLPDIPRGVKDLS---LHDSGLEEWPSSVPSLDNLTFFSVAFCKNLRSLP- 761

Query: 586 TVSNLKCLRSLKLSGCSKLKKFPEI 610
           ++   K LR + LSGCS LK  PEI
Sbjct: 762 SLLQWKSLRDIDLSGCSNLKVLPEI 786



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 215/503 (42%), Gaps = 97/503 (19%)

Query: 614  MKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCF 673
            M++L EL +  ++I+++ +  E   KL  L+LS   NL RLP  + +  +L ++ L GC 
Sbjct: 606  MENLVELNMPRSNIEQLWNDNEGPPKLRRLDLSKSVNLKRLPD-LSSTTNLTSIELWGCE 664

Query: 674  KLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKL 733
             L  +P ++ + + L  L++       S                   LPSL  L SL  L
Sbjct: 665  SLLEIPSSVQKCKKLYSLNLDNCKELRS-------------------LPSLIQLESLSIL 705

Query: 734  NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
            +L  C  ++  LP DI     +K+L L  +     P+S+  L  L    +  CK L+SLP
Sbjct: 706  SLACCPNLK-MLP-DIPR--GVKDLSLHDSGLEEWPSSVPSLDNLTFFSVAFCKNLRSLP 761

Query: 794  QL--PPNIRQVRVNGCASLVTL---------LDALKLCKSDSTMIACLDSLKL-----LG 837
             L    ++R + ++GC++L  L         +  L+  + D      L+ + L     L 
Sbjct: 762  SLLQWKSLRDIDLSGCSNLKVLPEIPDLPWQVGILQGSRKDYCRFHFLNCVNLGWYARLN 821

Query: 838  NKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLV 897
              + A   ++E   A + TR + +V + GS+ PEWF YQ+ G SIT++ P+  +N    +
Sbjct: 822  IMACAQQRIKEI--ASAKTRNYFAVALAGSKTPEWFSYQSLGCSITISLPTCSFN-TMFL 878

Query: 898  GYAICCVFHV---LKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAG-------- 946
            G+A C V      L  SR ++ +       + C           RD    +         
Sbjct: 879  GFAFCAVLEFEFPLVISRNSHFY-------IACESRFENTNDDIRDDLSFSASSLETIPE 931

Query: 947  SDHLWLLY----------LSRQTCYDIRLPLESNLE-PFESNHVNVSFEPWLGQGLEVKM 995
            SDH++L Y          L +  C   +   E   +  F SNH + S E W    ++VK 
Sbjct: 932  SDHVFLWYRFNSSDLNSWLIQNCCILRKASFEFKAQYRFLSNH-HPSTEKW---EVKVKR 987

Query: 996  CGLHPVYMDEVEE-LDQTTNQPSRFTVYNLNEFDQHFVGSKMIVATTSKRSLTEYFGAE- 1053
            CG+H +Y + V+  +    NQ  + T  N N                +KRS  +Y   + 
Sbjct: 988  CGVHLIYNENVQNAIAGDKNQWQQVTETNSN----------------NKRSRDDYCSNQT 1031

Query: 1054 ---ASGSGCCDDEEPQPKRFREL 1073
               A G     +EEPQ KR  + 
Sbjct: 1032 NIIADGGSGYAEEEPQAKRLNDF 1054



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 24/176 (13%)

Query: 543 MEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
           ME+L EL++  + I  L    E    L  L+L    +L+ LP  +S+   L S++L GC 
Sbjct: 606 MENLVELNMPRSNIEQLWNDNEGPPKLRRLDLSKSVNLKRLP-DLSSTTNLTSIELWGCE 664

Query: 603 KLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRL------- 654
            L + P  V+  K L  L LD    ++ +PS I+L   L +L+L+ C NL  L       
Sbjct: 665 SLLEIPSSVQKCKKLYSLNLDNCKELRSLPSLIQL-ESLSILSLACCPNLKMLPDIPRGV 723

Query: 655 -------------PSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA 697
                        PSS+ +L +L   +++ C  L ++P  L Q +SL ++D+SG +
Sbjct: 724 KDLSLHDSGLEEWPSSVPSLDNLTFFSVAFCKNLRSLPSLL-QWKSLRDIDLSGCS 778


>gi|357490889|ref|XP_003615732.1| Resistance protein [Medicago truncatula]
 gi|355517067|gb|AES98690.1| Resistance protein [Medicago truncatula]
          Length = 1177

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 237/587 (40%), Positives = 347/587 (59%), Gaps = 33/587 (5%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           ++SR EK+   +++ S+ V MIGI GMGGLGKTT A+ +Y+ I  +F    F++N+RE  
Sbjct: 190 LESRVEKMVPWIENNSTKVCMIGIWGMGGLGKTTAAKAIYNQIHRKFVYRSFIENIRETC 249

Query: 60  --SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
              SKGG     +Q L   L      I N+  G   +   L  KKVL+V+DDV  V+Q++
Sbjct: 250 ERDSKGGWHICLQQQLLSDLLKTKEKIHNIASGTIAIKKMLSAKKVLIVLDDVTKVEQVK 309

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
           +L  +R+WFG+GS +I+TSRD H+LK+  VD VY  + ++  E+L+LF+  AF+   P  
Sbjct: 310 ALYESRKWFGAGSVLIVTSRDAHILKSLQVDHVYPVNEMDQKESLELFSWHAFRQASPRA 369

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
           +  +LS+ +I+Y GGLPLA EV+GS+L GR+ +EW S L +LEI P   + + L+IS+DG
Sbjct: 370 DFSELSSSVIKYCGGLPLAAEVIGSYLYGRTREEWTSVLSKLEIIPDHHVQEKLRISYDG 429

Query: 238 LQE-LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMH 295
           L +  +K IFLDI CFF G DR YVT  L GCG    IGI VLIE+ L+ V  NN L MH
Sbjct: 430 LSDGKQKDIFLDICCFFIGKDRAYVTEILNGCGLFASIGISVLIERSLLKVEKNNKLGMH 489

Query: 296 DLLQELGQQIVQRQSPEEL--------GKRSRLWKEEEVCHVLTESTGTELVEGIVLDNY 347
           DL++++G++IV++ S +++        G+RSRLW +++V  VLT +TGT+ VEG+VL+  
Sbjct: 490 DLIRDMGREIVRQNSEKDVRQISEKDPGERSRLWFQKDVHDVLTNNTGTKTVEGLVLN-- 547

Query: 348 HHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
             E       +  AF +M  LRLL++  + L     +LS +LR + WR      +P+N  
Sbjct: 548 -LETTSRASFNTSAFQEMKKLRLLQLDCVDLTGDFGFLSKQLRWVNWRQSTFNHVPNNFY 606

Query: 408 MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
               +   + YS + ++WK    LDKLK++ LSHS+ L   P+F+  P+LEKLI++ C  
Sbjct: 607 QGNLVVFELKYSMVKQVWKETPFLDKLKILNLSHSKYLKNTPNFSLLPSLEKLIMKDCPS 666

Query: 468 LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDV 527
           L E+HPS+   N L+++N KDCTS                 L +LP  IS L  ++TL +
Sbjct: 667 LSEVHPSIGDLNNLLLINFKDCTS-----------------LGNLPREISQLMSVTTLIL 709

Query: 528 SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL 574
            G     E  E V  M+ L  L    T I   P SI     +V ++L
Sbjct: 710 DGCSNITELEEDVVQMKSLKTLMAARTGIEKAPFSIVSSKSIVYISL 756



 Score = 47.0 bits (110), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)

Query: 590 LKCLRSLKLSGCSKLKKFPE--IVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
           L  L+ L LS    LK  P   ++ S++ L  +  D  S+ EV  SI  L  L L+N  D
Sbjct: 630 LDKLKILNLSHSKYLKNTPNFSLLPSLEKL--IMKDCPSLSEVHPSIGDLNNLLLINFKD 687

Query: 648 CKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
           C +L  LP  I  L S+ TL L GC  +  + E + Q++SL+ L  + T +
Sbjct: 688 CTSLGNLPREISQLMSVTTLILDGCSNITELEEDVVQMKSLKTLMAARTGI 738


>gi|28558777|gb|AAO45748.1| MRGH5 [Cucumis melo subsp. melo]
          Length = 1092

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 309/856 (36%), Positives = 463/856 (54%), Gaps = 86/856 (10%)

Query: 19   VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS-KGGLVSLQRQLLSQLL 77
            V M+GI G+GG+GKTT+A+ +YD ++ +FE   +L +VRE S    GL  LQ++LL Q+L
Sbjct: 215  VNMLGIYGIGGIGKTTLAKALYDKMASQFEGCCYLRDVREASKLFDGLTQLQKKLLFQIL 274

Query: 78   KLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSR 137
            K  D  + ++  GI+++ +RL+ KKVL+++DDV  ++QLQ+L G  +WFG G++II+T+R
Sbjct: 275  KY-DLEVVDLDWGINIIKNRLRSKKVLILLDDVDKLEQLQALVGGHDWFGQGTKIIVTTR 333

Query: 138  DEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLAL 197
            ++ LL +HG D++Y+  GL+  EA++LF   AFK  QP    + LS R  RY  G PLAL
Sbjct: 334  NKQLLVSHGFDKMYEVQGLSKHEAIELFRRHAFKNLQPSSNYLDLSERATRYCTGHPLAL 393

Query: 198  EVLGSFLSGRS-VDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGN 256
             VLGSFL  RS + EW   L+  E     +I DILQ+SFDGL++  K+IFLDI+C   G 
Sbjct: 394  IVLGSFLCDRSDLAEWSGILDGFENSLRKDIKDILQLSFDGLEDEVKEIFLDISCLLVGK 453

Query: 257  DRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGK 316
               YV   L  C      GI  L +  LI   ++ + MHDL++++G +IV  +S ++ GK
Sbjct: 454  RVSYVKKMLSECHSILDFGITKLKDLSLIRFEDDRVQMHDLIKQMGHKIVHDESHDQPGK 513

Query: 317  RSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI-CN 375
            RSRLW E+++  V + ++G++ V+ I L     +  + L    +AF  M NLR+L +  N
Sbjct: 514  RSRLWLEKDILEVFSNNSGSDAVKAIKLVLTDPKRVIDL--DPEAFRSMKNLRILMVDGN 571

Query: 376  LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLK 435
            ++    ++YL N L+ + W  +    LPS       + + + +S I    KG+++  +LK
Sbjct: 572  VRFCKKIKYLPNGLKWIKWHRFAHPSLPSCFITKDLVGLDLQHSFITNFGKGLQNCMRLK 631

Query: 436  VMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITL 495
            ++ L HS  L ++ + + APNLE+L L  C+ L  I  S L   KL+ L++  C +L  +
Sbjct: 632  LLDLRHSVILKKISESSAAPNLEELYLSNCSNLKTIPKSFLSLRKLVTLDLHHCVNLKKI 691

Query: 496  PGKIL------------MKSLEKL------------------------------------ 507
            P   +             K LEK+                                    
Sbjct: 692  PRSYISWEALEDLDLSHCKKLEKIPDISSASNLRSLSFEQCTNLVMIHDSIGSLTKLVTL 751

Query: 508  ------NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLP 560
                  NLK LP  IS    L  L++S   K  E P+      +L  L LE  T++R + 
Sbjct: 752  KLQNCSNLKKLPRYISW-NFLQDLNLSWCKKLEEIPDF-SSTSNLKHLSLEQCTSLRVVH 809

Query: 561  LSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL 620
             SI  LS LV LNL+ C +LE LP  +  LK L++L LSGC KL+ FPEI  +MK L  L
Sbjct: 810  DSIGSLSKLVSLNLEKCSNLEKLPSYL-KLKSLQNLTLSGCCKLETFPEIDENMKSLYIL 868

Query: 621  FLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV-- 678
             LD T+I+E+P SI  LT L + +L  C NL+ LP +   LKSL  L+LSG  + E    
Sbjct: 869  RLDSTAIRELPPSIGYLTHLYMFDLKGCTNLISLPCTTHLLKSLGELHLSGSSRFEMFSY 928

Query: 679  ---PETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNL 735
               P       S + ++ S T    S  ++S +P    ++S+  K  +L        L+L
Sbjct: 929  IWDPTINPVCSSSKIMETSLT----SEFFHSRVP----KESLCFKHFTL--------LDL 972

Query: 736  TDCNLMEGALPSDIGNLC-SLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ 794
              CN+        + N+  SL  + LS+N+F SLP+ +     L N+EL +CK LQ +P 
Sbjct: 973  EGCNISNVDFLEILCNVASSLSSILLSENNFSSLPSCLHKFMSLRNLELRNCKFLQEIPN 1032

Query: 795  LPPNIRQVRVNGCASL 810
            LP  I++V   GC SL
Sbjct: 1033 LPLCIQRVDATGCVSL 1048


>gi|357500587|ref|XP_003620582.1| Elongation factor Ts [Medicago truncatula]
 gi|355495597|gb|AES76800.1| Elongation factor Ts [Medicago truncatula]
          Length = 1245

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 267/632 (42%), Positives = 375/632 (59%), Gaps = 58/632 (9%)

Query: 1   MDSRCEKLR--FLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE 58
           +DSR + L+   L+DS  S VR IGICGMGG+GKTT+A  +YD ISH F AS F+D+V +
Sbjct: 198 IDSRLDGLQNHLLLDSVDS-VRAIGICGMGGIGKTTLAMALYDQISHRFSASCFIDDVSK 256

Query: 59  ISS-KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
           I     G +  Q+Q+L Q L +  + I N +   +++ SRL R++VLL++D+V  V QL+
Sbjct: 257 IYKLHDGPLDAQKQILLQTLGIEHHQICNHYSVTNLIRSRLCRERVLLILDNVDQVAQLE 316

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
            +  +REW G+GSRIII SRDEH+LK +GVD VYK   LN+ ++ +LF  KAFK  + + 
Sbjct: 317 KIGVHREWLGAGSRIIIISRDEHILKYYGVDAVYKVPLLNWTDSHKLFCQKAFKFEKVIM 376

Query: 178 ECVQ-LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
              + L+  I+ YA GLPLA+ VLGSFL GR+V EW+S L RL   P ++I+D+LQ+SFD
Sbjct: 377 SNYENLAYEILDYANGLPLAIIVLGSFLFGRNVTEWKSALARLRESPNNDIMDVLQLSFD 436

Query: 237 GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
           GL+  EK+IFL IACFF  + ++YV N L  CGFH  IG+ VL +K LI++  +T+ MH 
Sbjct: 437 GLEHTEKEIFLHIACFFSYSSKEYVKNILNCCGFHADIGLSVLNDKSLISLGESTIIMHS 496

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL+ELG++IVQ  S +E  K SR+W E+++ +V  E      VE I L +Y         
Sbjct: 497 LLEELGRKIVQENSSKERRKWSRVWSEKQLNNVTMEKMEKH-VEAIELWSYEE------- 548

Query: 357 ASAKAFSKMTNLRLLKI-CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
              +  +KM+NLRLL I C   +P  L  LSN LR + W GYP K LP++   +  IE+ 
Sbjct: 549 VVVEHLAKMSNLRLLIIKCGRNIPGSLSSLSNALRYVEWDGYPFKCLPTSFHPNDLIELI 608

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           +  S I +LWK  K+L  L+ + LS+S  L+++ DF   PNLE L LEGC  L E+ PS+
Sbjct: 609 LMNSDIKQLWKNKKYLPNLRRLGLSYSRKLLKIVDFGEFPNLEWLNLEGCKNLVELDPSI 668

Query: 476 LLHNKLIILNMKDCTSLITLPGKIL-MKSLEKLNLKS----------------------- 511
            L  KL+ LN+K+C +L+++P  I  + SLE LN++                        
Sbjct: 669 GLLRKLVYLNLKNCKNLVSIPNNIFDLCSLEDLNMRGCSKVFNNPMHLKKSGLSSTKKKN 728

Query: 512 ----------------LPTTISGLKCLSTLDVSGDLKF---REFPEIVEHMEHLSELHLE 552
                            PTT + L   S    S D+ F   R+ P+ +E +  L  L L 
Sbjct: 729 KKQHDTRESESHSSFPTPTTNTYLLPFSHSLRSIDISFCHLRQVPDAIECLHWLERLDLG 788

Query: 553 GTAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
           G     LP S+  LS LV LNL++C+ LE LP
Sbjct: 789 GNNFVTLP-SLRKLSKLVYLNLEHCKLLESLP 819



 Score =  113 bits (282), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 134/439 (30%), Positives = 210/439 (47%), Gaps = 53/439 (12%)

Query: 589  NLKCLRSLKLSGCSKLKKFPEIVR--SMKDLSELFLDG-TSIKEVPSSIELLTKLELLNL 645
            N K L +L+  G S  +K  +IV      +L  L L+G  ++ E+  SI LL KL  LNL
Sbjct: 620  NKKYLPNLRRLGLSYSRKLLKIVDFGEFPNLEWLNLEGCKNLVELDPSIGLLRKLVYLNL 679

Query: 646  SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQ--IESLEELDISGTAVPHSTS 703
             +CKNLV +P++I  L SL+ LN+ GC K+ N P  L +  + S ++ +        S S
Sbjct: 680  KNCKNLVSIPNNIFDLCSLEDLNMRGCSKVFNNPMHLKKSGLSSTKKKNKKQHDTRESES 739

Query: 704  WYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKN 763
             +S  P       +      L    SLR ++++ C+L +  +P  I  L  L+ L L  N
Sbjct: 740  -HSSFPTPTTNTYL------LPFSHSLRSIDISFCHLRQ--VPDAIECLHWLERLDLGGN 790

Query: 764  SFVSLPTSITHLSKLLNIELEDCKRLQSLPQL--PPNIRQVRVNGCASLVTLLDALKLCK 821
            +FV+LP S+  LSKL+ + LE CK L+SLP+L  PP   + +     + + L D   + K
Sbjct: 791  NFVTLP-SLRKLSKLVYLNLEHCKLLESLPRLPSPPTSGRDQQENNNTFIGLYDFGIVRK 849

Query: 822  SDSTMIACLDSLKLLGNK---SLAFSMLREYLEAVSNTRQHLS---VVVPGSEIPEWFMY 875
                +I     L     +   SL FS + +++ A  N + +L+   ++ PGSEIP W   
Sbjct: 850  ITGLVIFNCPKLADCERERCSSLTFSWMIQFIMA--NPQSYLNEFHIITPGSEIPSWINN 907

Query: 876  QNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYG 935
            Q+ G SI +   S +++    +G+  C VF V           S    ++ C I   I  
Sbjct: 908  QSMGDSIPIEFSSAMHDNT--IGFVCCVVFSVAPQV-------STVWFRIMC-IDLDI-P 956

Query: 936  IGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGL--EV 993
            +  +       S HLW+++L R + YD           FE    N+     LG+GL  EV
Sbjct: 957  VTIKGSLITTKSSHLWMIFLPRGS-YD----------KFE----NICCYDVLGEGLGMEV 1001

Query: 994  KMCGLHPVYMDEVEELDQT 1012
            K CG   +   +++E + T
Sbjct: 1002 KSCGYRWICKQDLQEFNIT 1020


>gi|147802475|emb|CAN61853.1| hypothetical protein VITISV_027841 [Vitis vinifera]
          Length = 1244

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 284/742 (38%), Positives = 418/742 (56%), Gaps = 103/742 (13%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           + SR +++   +   S+DVRM+GICG+GG+GKTTIA+VVY+LIS +FE   FL N+RE+S
Sbjct: 194 VSSRLKEILLRVSIESNDVRMVGICGIGGVGKTTIAKVVYNLISSQFEGISFLANIREVS 253

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
              GL+ LQ+QLL  +L      I N+ +GI++L  RL  KKVL+++DDV D+ QL+SLA
Sbjct: 254 KNCGLLPLQKQLLGDILMGWSQRISNLBEGINVLMDRLHSKKVLIILDDVDDLNQLESLA 313

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           GN +WFG GSRI+IT+RD+HLL  HGV E+Y+   L  +EALQLF+  AFK   P ++ +
Sbjct: 314 GNVDWFGIGSRIVITTRDKHLLNVHGVSEIYEAKELEPEEALQLFSQYAFKRKSPXKDYM 373

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            LS  ++ YA GLPLAL+VLGSFL  +++ EW S L +L+ E  +++ D+L+ISFDGL  
Sbjct: 374 NLSDNVVHYAKGLPLALKVLGSFLFSKTILEWESELHKLKKELNTKVQDVLRISFDGLDF 433

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            +K+IFLD+ACFFKG + D+V   L+GCGFH   GIRVL ++CLI + +N LWMHDL+Q+
Sbjct: 434 TQKEIFLDLACFFKGQEYDFVIKILDGCGFHAKSGIRVLSDRCLIDLLDNRLWMHDLIQQ 493

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G +IV+++ P++ GK SRLW  E +  VL ++T  + +  I L N  H           
Sbjct: 494 MGWEIVRQECPKDPGKWSRLWDYEHIYSVLKKNTVLDNLNTIELSNSQH------LIHLP 547

Query: 361 AFSKMTNLR--LLKICN--LQLPNGLEYLSNRLRLLG------WRGYP-------LKFLP 403
            FS M NL   +L+ C   L++   +E L N+L  L        R +P       LK+L 
Sbjct: 548 NFSSMPNLERLVLEGCTSFLEVDPSIEVL-NKLIFLNLKNCKKLRSFPRSIKLECLKYLS 606

Query: 404 ----SNLQ--------MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMP-D 450
               S+L+        M    E+Y+  + I EL   I +L  L ++ L + + L  +P  
Sbjct: 607 LSGCSDLKNFPEIQGNMQHLSELYLDGTAISELPFSIGYLTGLILLDLENCKRLKSLPSS 666

Query: 451 FTGAPNLEKLILEGC-----------------------TRLYEIHPSLLLHNKLIILNMK 487
                +LE LIL  C                       T L ++HPS+   N L+ LN++
Sbjct: 667 ICKLKSLETLILSACSKLESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLR 726

Query: 488 DCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLS 547
           DC                  NL +LP +I  LK L TL VSG  K ++ PE +  ++ L 
Sbjct: 727 DCK-----------------NLATLPCSIGNLKSLETLIVSGCSKLQQLPENLGSLQCLV 769

Query: 548 ELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE-----------ILP-----------V 585
           +L  +GT +R  P SI LL  L +L+   C+ L            +LP            
Sbjct: 770 KLQADGTLVRQPPSSIVLLRNLEILSFGGCKGLASNSWSSLFSFWLLPRKSSDTIGLQLP 829

Query: 586 TVSNLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLN 644
           ++S L  LR L +S C+ ++   P  + ++  L  L L   +   +P+ I  L+KL  L+
Sbjct: 830 SLSGLCSLRELDISDCNLMEGAVPFDICNLSSLETLNLSRNNFFSLPAGISKLSKLRFLS 889

Query: 645 LSDCKNLVR---LPSSIIALKS 663
           L+ CK+L++   LPSSII + +
Sbjct: 890 LNHCKSLLQIPELPSSIIEVNA 911



 Score =  370 bits (951), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 246/620 (39%), Positives = 344/620 (55%), Gaps = 85/620 (13%)

Query: 418  YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
            Y  I  + K    LD L  + LS+S++LI +P+F+  PNLE+L+LEGCT   E+ PS+ +
Sbjct: 516  YEHIYSVLKKNTVLDNLNTIELSNSQHLIHLPNFSSMPNLERLVLEGCTSFLEVDPSIEV 575

Query: 478  HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
             NKLI LN+K+C  L                 +S P +I  L+CL  L +SG    + FP
Sbjct: 576  LNKLIFLNLKNCKKL-----------------RSFPRSIK-LECLKYLSLSGCSDLKNFP 617

Query: 538  EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
            EI  +M+HLSEL+L+GTAI  LP SI  L+GL+LL+L+NC+ L+ LP ++  LK L +L 
Sbjct: 618  EIQGNMQHLSELYLDGTAISELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLI 677

Query: 598  LSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSS 657
            LS CSKL+ FPEI+ +M+ L +L LDGT++K++  SIE L  L  LNL DCKNL  LP S
Sbjct: 678  LSACSKLESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPCS 737

Query: 658  IIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH----------------- 700
            I  LKSL+TL +SGC KL+ +PE LG ++ L +L   GT V                   
Sbjct: 738  IGNLKSLETLIVSGCSKLQQLPENLGSLQCLVKLQADGTLVRQPPSSIVLLRNLEILSFG 797

Query: 701  ------STSWYSYIPINLM-RKS---VALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIG 750
                  S SW S     L+ RKS   + L+LPSLSGLCSLR+L+++DCNLMEGA+P DI 
Sbjct: 798  GCKGLASNSWSSLFSFWLLPRKSSDTIGLQLPSLSGLCSLRELDISDCNLMEGAVPFDIC 857

Query: 751  NLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
            NL SL+ L LS+N+F SLP  I+ LSKL  + L  CK L  +P+LP +I +V    C+SL
Sbjct: 858  NLSSLETLNLSRNNFFSLPAGISKLSKLRFLSLNHCKSLLQIPELPSSIIEVNAQYCSSL 917

Query: 811  VTLLDALKLCKSDS-------TMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHL--- 860
             T+L    +C +         T+  C + L      S   +++   ++ V+N  Q L   
Sbjct: 918  NTILTPSSVCNNQPVCRWLVFTLPNCFN-LDAENPCSNDMAIISPRMQIVTNMLQKLQNF 976

Query: 861  ------SVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGN 914
                  S+ +PGSEIP+W   QN GS +T+  P + + +   +G+A+CCVF   ++   N
Sbjct: 977  LPDFGFSIFLPGSEIPDWISNQNLGSEVTIELPPHWF-ESNFLGFAVCCVF-AFEDIAPN 1034

Query: 915  NCFGSYPTHQLNCH----------IGHGIYGIGFR-DKFGQAGSDHLWLLYLSRQTCYDI 963
             C     + QL C           IGH ++ I    +   +  S H+WL Y  R      
Sbjct: 1035 GC-----SSQLLCQLQSDESHFRGIGHILHSIDCEGNSEDRLKSHHMWLAYKPRG----- 1084

Query: 964  RLPLESNLEPFESNHVNVSF 983
            RL +     P    H   SF
Sbjct: 1085 RLRISYGDCPNRWRHAKASF 1104


>gi|357469181|ref|XP_003604875.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505930|gb|AES87072.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 880

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 241/565 (42%), Positives = 352/565 (62%), Gaps = 27/565 (4%)

Query: 3   SRCEKLRFLMD-SGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI-S 60
           SR E +  L++   S+DV ++GI GMGGLGKTT+A+ +Y+ I  +FE   FL N+RE+  
Sbjct: 187 SRVEDVTNLLNIQNSNDVLLLGIWGMGGLGKTTLAKAIYNQIGIKFEGRSFLLNIREVWE 246

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +    VSLQ+Q+L  + K  +  I ++  G ++L  RL +K+VLLV+DDV  + QL++L 
Sbjct: 247 TDTNQVSLQQQILCDVYKTTELKILDIESGKNLLKERLAQKRVLLVLDDVNKLDQLKALC 306

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G+R+WFG GSR+IIT+RD  LL++  VD VY    ++  E+L+LF   AFK   P +   
Sbjct: 307 GSRKWFGPGSRVIITTRDMRLLRSCRVDLVYTVVEMDERESLELFCWHAFKQPCPPEGFA 366

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
             S  +I Y+GGLPLAL+VLGS+LSG    EW+  LE+L+  P  ++   L++SFDGL++
Sbjct: 367 THSRDVIVYSGGLPLALQVLGSYLSGCETTEWQKVLEKLKCIPHDQVQKKLKVSFDGLKD 426

Query: 241 L-EKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLL 298
           + EK+IF DIACFF G D++ +   L GCG+   IGI VL+++ L+TV   N L MHDLL
Sbjct: 427 VTEKQIFFDIACFFIGMDKNDIIQILNGCGYFGDIGIEVLVQQSLVTVDIGNKLRMHDLL 486

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           +++G+QIV  +SP     RSRLW  EEV  +L+   GTE V+G+ L+ +  E    +C  
Sbjct: 487 RDMGRQIVYEESPFHPEMRSRLWFREEVFDMLSNHKGTEAVKGLALE-FPRE----VCLE 541

Query: 359 AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
            K+F KM  LRLL++  ++L    +YLS  L+ L W G+P  ++P+  Q+   + + + Y
Sbjct: 542 TKSFKKMNKLRLLRLAGVKLKGDFKYLSGDLKWLYWHGFPETYVPAEFQLGSLVVMELKY 601

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           S++ ++W   + L+ LKV+ LSHS +L   PDF+  PNLEKLILE C  L  +  S+   
Sbjct: 602 SKLKQIWNKSQMLENLKVLNLSHSLDLTETPDFSYMPNLEKLILEDCPSLSTVSHSIGSL 661

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
           +K++++N+ DCT L TLP     KS+ K  LKSL T I  L   S LD   DL       
Sbjct: 662 HKILLINLTDCTGLRTLP-----KSIYK--LKSLATLI--LSGCSMLDKLEDL------- 705

Query: 539 IVEHMEHLSELHLEGTAIRGLPLSI 563
             E ME L+ L  + TAI  +P S+
Sbjct: 706 --EQMESLTTLIADKTAIPEVPSSL 728



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 101/204 (49%), Gaps = 22/204 (10%)

Query: 502 KSLEKLNLKSLPTTISGLKCLSTLD-VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLP 560
           KS +K+N   L   ++G+K       +SGDLK+               L+  G     +P
Sbjct: 543 KSFKKMNKLRL-LRLAGVKLKGDFKYLSGDLKW---------------LYWHGFPETYVP 586

Query: 561 LSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL 620
              +L S LV++ LK  +  +I   +   L+ L+ L LS    L + P+    M +L +L
Sbjct: 587 AEFQLGS-LVVMELKYSKLKQIWNKS-QMLENLKVLNLSHSLDLTETPDF-SYMPNLEKL 643

Query: 621 FL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVP 679
            L D  S+  V  SI  L K+ L+NL+DC  L  LP SI  LKSL TL LSGC  L+ + 
Sbjct: 644 ILEDCPSLSTVSHSIGSLHKILLINLTDCTGLRTLPKSIYKLKSLATLILSGCSMLDKL- 702

Query: 680 ETLGQIESLEELDISGTAVPHSTS 703
           E L Q+ESL  L    TA+P   S
Sbjct: 703 EDLEQMESLTTLIADKTAIPEVPS 726


>gi|357513279|ref|XP_003626928.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355520950|gb|AET01404.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1087

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 242/565 (42%), Positives = 346/565 (61%), Gaps = 28/565 (4%)

Query: 4   RCEK-LRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK 62
           R EK +RFL  + +  V ++GI GMGG+GK+TIA+V+Y+ + +EFE   F+ N+RE+  K
Sbjct: 187 RAEKPIRFLRQN-TRKVCLVGIWGMGGIGKSTIAKVIYNDLCYEFEDQSFVANIREVWEK 245

Query: 63  G-GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA- 120
             G + LQ QLLS +LK     + +V  G  M+  RL+ K++L V+DDV +++Q  +L  
Sbjct: 246 DRGRIDLQEQLLSDILKTRKIKVLSVEQGKAMIKQRLRSKRILAVLDDVSELEQFNALCE 305

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           GN    G GS IIIT+RD  +L    VD +Y+  GLN  E+L+LF   AF+   P ++ +
Sbjct: 306 GNS--VGPGSVIIITTRDLRVLNILEVDFIYEAEGLNASESLELFCGHAFRKVIPTEDFL 363

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            LS  ++ Y GG+PLALEVLGS+L  R   EW+S L +LE  P  +I + L+ISF+GL +
Sbjct: 364 ILSRYVVAYCGGIPLALEVLGSYLLKRRKQEWQSVLSKLEKIPNDQIHEKLKISFNGLSD 423

Query: 241 -LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT-LWMHDLL 298
            +EK IFLD+ CFF G DR YVT  L GCG H  IGI VLIE+ LI V  N  L MHDLL
Sbjct: 424 RMEKDIFLDVCCFFIGKDRAYVTKILNGCGLHADIGITVLIERSLIKVEKNKKLGMHDLL 483

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           +++G++IV+  SPEE  KR+RLW  E+V +VL + TGT+ +EG+V+      N V  C  
Sbjct: 484 RDMGREIVRESSPEEPEKRTRLWCHEDVVNVLEDHTGTKAIEGLVM-KLPKTNRV--CFD 540

Query: 359 AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
             AF KM  LRLL++ N+Q+    +  S  LR L W+G+PLK+ P N      + + + +
Sbjct: 541 TIAFEKMKRLRLLQLDNVQVIGDYKCFSKHLRWLSWQGFPLKYTPENFYQKNVVAMDLKH 600

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           S + ++WK  + ++ LK++ LSHS+ L R PDF+  PNLEKLI++ C  L E+HPS+   
Sbjct: 601 SNLTQVWKKPQLIEGLKILNLSHSKYLKRTPDFSKLPNLEKLIMKDCQSLLEVHPSIGDL 660

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
             L++LN+KDCTS                 L +LP  I  L+ + TL +SG  K  +  E
Sbjct: 661 KNLLLLNLKDCTS-----------------LSNLPREIYQLRTVETLILSGCSKIDKLEE 703

Query: 539 IVEHMEHLSELHLEGTAIRGLPLSI 563
            +  ME L+ L    T ++  P SI
Sbjct: 704 DIVQMESLTTLMAANTGVKQPPFSI 728



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 168/371 (45%), Gaps = 34/371 (9%)

Query: 550 HLEGTAIRGLPLSIE----LLSGLVLLNLKNCRSLEIL--PVTVSNLKCLRSLKLSGCSK 603
           HL   + +G PL           +V ++LK+    ++   P  +  LK L    LS    
Sbjct: 570 HLRWLSWQGFPLKYTPENFYQKNVVAMDLKHSNLTQVWKKPQLIEGLKIL---NLSHSKY 626

Query: 604 LKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
           LK+ P+  + + +L +L + D  S+ EV  SI  L  L LLNL DC +L  LP  I  L+
Sbjct: 627 LKRTPDFSK-LPNLEKLIMKDCQSLLEVHPSIGDLKNLLLLNLKDCTSLSNLPREIYQLR 685

Query: 663 SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
           +++TL LSGC K++ + E + Q+ESL  L  + T V          P +++R S ++   
Sbjct: 686 TVETLILSGCSKIDKLEEDIVQMESLTTLMAANTGVKQP-------PFSIVR-SKSIGYI 737

Query: 723 SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIE 782
           SL G   L        +L+   +   + ++  +        S  SL     +L+ +   +
Sbjct: 738 SLCGYEGLSHHVFP--SLIRSWMSPTMNSVAHISPFGGMSKSLASLDIESNNLALVYQSQ 795

Query: 783 -LEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDA--LKLCKSDSTMIA--CLDSLKL-L 836
            L  C +L+S+     +  Q++      L  L DA   +L  S ++ I+   L SL + +
Sbjct: 796 ILSSCSKLRSVSVQCDSEIQLKQEFRRFLDDLYDAGLTELGISHASHISDHSLRSLLIGM 855

Query: 837 GNKSLAFSMLREYLEA--VSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKK 894
           GN  +  ++L + L     +N+R +    +PG   P W  Y+ EG S+    P +     
Sbjct: 856 GNCHIVINILGKSLSQGLTTNSRDNF---LPGDNYPSWLAYRGEGPSVLFQVPDDTNYCM 912

Query: 895 KLVGYAICCVF 905
           K  G  +C ++
Sbjct: 913 K--GMTLCVLY 921


>gi|357513283|ref|XP_003626930.1| TMV resistance protein N [Medicago truncatula]
 gi|355520952|gb|AET01406.1| TMV resistance protein N [Medicago truncatula]
          Length = 1091

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 227/567 (40%), Positives = 344/567 (60%), Gaps = 25/567 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++S  +++  +++  S DV M+GI GMGG GKTT+A+ +Y+ I   F+ + F++N+RE+ 
Sbjct: 199 LESHVKQVVGVIEKHSGDVCMVGIWGMGGSGKTTVAKAIYNEIHRRFDCTSFIENIREVC 258

Query: 61  SKG--GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            K   G + LQ+QLLS +LK  +  I ++  G   +   L  KK L+++DDV D +Q+++
Sbjct: 259 EKDTKGHIHLQQQLLSDVLKTKEK-IHSIASGTATIQRELTGKKALVILDDVTDFQQIKA 317

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L GN ++FG+GS +I+T+RD H+LK   VD VYK   +  +E+L+LF+  AF+   P   
Sbjct: 318 LCGNHKFFGAGSVLIVTTRDVHILKLLNVDSVYKMEEMQKNESLELFSWHAFRKASPRGG 377

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             +LS  +  Y GGLPLALEVLGS+L  R+  EW S L +LE  P  ++ + L+IS+DGL
Sbjct: 378 FSELSRNVAAYCGGLPLALEVLGSYLFERTKQEWISVLSKLERIPNDQVHEKLRISYDGL 437

Query: 239 Q-ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHD 296
           + ++ K IFLDI CFF G DR YVT  L GCG +  IGI VLI++ L+ V  NN L MHD
Sbjct: 438 KDDMVKDIFLDICCFFIGKDRAYVTEILNGCGLYADIGIAVLIDRSLLKVEKNNKLGMHD 497

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           L++++G++IV+  S  E GKRSRLW  E+V  VL ++TGTE VE ++ +        +  
Sbjct: 498 LIRDMGREIVRESSAREPGKRSRLWFHEDVHDVLAKNTGTETVEALIFNLQRTGRGSF-- 555

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            S   F  M  LRLL++  + L     YLS +LR + W+     F+P++   +  +   +
Sbjct: 556 -STNTFQDMKKLRLLQLDRVDLTGDFGYLSKQLRWVNWQRSTFNFVPNDFDQENLVAFEL 614

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
            YS + ++WK  K L KLK++ LSHS++L R PDF+  PNLEKLI++ C  L +IHPS+ 
Sbjct: 615 KYSNVKQVWKETKLLHKLKILNLSHSKHLKRTPDFSKLPNLEKLIMKDCQSLSDIHPSIG 674

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
               L+++N+KDC SL+ LP +I                   L+ + TL +SG  K  + 
Sbjct: 675 DLKNLLLINLKDCASLVNLPREIYR-----------------LRSVKTLILSGCSKIVKL 717

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSI 563
            E +  M+ L+ L  E   ++ +P SI
Sbjct: 718 EEDIVQMKSLTTLIAENAGVKQVPFSI 744



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 150/348 (43%), Gaps = 47/348 (13%)

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDC 648
           L  L+ L LS    LK+ P+  + + +L +L + D  S+ ++  SI  L  L L+NL DC
Sbjct: 629 LHKLKILNLSHSKHLKRTPDFSK-LPNLEKLIMKDCQSLSDIHPSIGDLKNLLLINLKDC 687

Query: 649 KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI 708
            +LV LP  I  L+S+KTL LSGC K+  + E + Q++SL  L      V         +
Sbjct: 688 ASLVNLPREIYRLRSVKTLILSGCSKIVKLEEDIVQMKSLTTLIAENAGVKQ-------V 740

Query: 709 PINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSL 768
           P +++R      +     LC  + L+           PS I +  S      + NS   +
Sbjct: 741 PFSIVRSKNITHI----SLCGYQGLS-------RDVFPSIIWSWMSP-----TMNSLARI 784

Query: 769 PT----SITHLSKLLNIELEDCKRLQSLPQLPP--NIRQVRVNGCASLVTLLDALKLCKS 822
           P+    S++ +S  LNI+ ++   +   P L     +R V V  C S + L   LK+  +
Sbjct: 785 PSFGGISMSLVS--LNIDSDNLGLVYQSPILSSCSKLRCVSVQ-CHSEIQLKQELKVFLN 841

Query: 823 DSTM--IACLDSLKLLGNKSLAFSM---------LREYLEAVSNTRQHLSVVVPGSEIPE 871
           D T   I+    +  L  +SL   M         L + L     T    +  +PG+ IP 
Sbjct: 842 DLTELEISHASQISDLSLQSLLIGMGSYHKVNETLGKSLSQGLATNDSRASFLPGNNIPS 901

Query: 872 WFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGS 919
           W  Y  EG S+    P +  +   + G  +C ++     +    C  S
Sbjct: 902 WLAYTCEGPSVCFQVPKD--SNCGMKGITLCVLYSSTLKNMATECLTS 947


>gi|30692996|ref|NP_198509.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332006745|gb|AED94128.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1188

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 277/694 (39%), Positives = 399/694 (57%), Gaps = 35/694 (5%)

Query: 3   SRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK 62
           SR + +  L+  GS  VR+I I GMGG+GKTT+A+V ++  SH FE S FL+N RE S K
Sbjct: 193 SRLQHISSLLSIGSDGVRVIVIYGMGGIGKTTLAKVAFNEFSHLFEGSSFLENFREYSKK 252

Query: 63  G-GLVSLQRQLLSQLLKLADNSIWNVFDGID-MLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
             G   LQ QLLS +L+  D      F G+D  +  R + K+VLLV+DDV DV QL S A
Sbjct: 253 PEGRTHLQHQLLSDILRRNDIE----FKGLDHAVKERFRSKRVLLVVDDVDDVHQLNSAA 308

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            +R+ FG GSRIIIT+R+ HLLK    +  Y P  L+ DE+L+LF+  AF+T +P +E +
Sbjct: 309 IDRDCFGHGSRIIITTRNMHLLKQLRAEGSYSPKELDGDESLELFSWHAFRTSEPPKEFL 368

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           Q S  ++ Y  GLPLA+EVLG+FL  RS+ EW STL+ L+  P   I   LQISF+ L  
Sbjct: 369 QHSEEVVTYCAGLPLAVEVLGAFLIERSIREWESTLKLLKRIPNDNIQAKLQISFNALTI 428

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            +K +FLDIACFF G D  YV   L+GC  +P I + +L+E+CLIT+  N + MHDLL++
Sbjct: 429 EQKDVFLDIACFFIGVDSYYVACILDGCNLYPDIVLSLLMERCLITISGNNIMMHDLLRD 488

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G+QIV+  SP++ G+RSRLW   +V  VL + +GT  +EG+ L     + + +     +
Sbjct: 489 MGRQIVREISPKKCGERSRLWSHNDVVGVLKKKSGTNAIEGLSLKADVMDFQYF---EVE 545

Query: 361 AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
           AF+KM  LRLL++  + L    E+    LR L W G+ L+  P NL ++    + + YS 
Sbjct: 546 AFAKMQELRLLELRYVDLNGSYEHFPKDLRWLCWHGFSLECFPINLSLESLAALDLQYSN 605

Query: 421 IGELWKG---IKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL-L 476
           +   WK     +  + +K + LSHS  L   PDF+  PN+EKLIL  C  L  +H S+ +
Sbjct: 606 LKRFWKAQSPPQPANMVKYLDLSHSVYLRETPDFSYFPNVEKLILINCKSLVLVHKSIGI 665

Query: 477 LHNKLIILNMKDCTSLITLPGKIL-MKSLEKL------NLKSLPTTISGLKCLSTLDVSG 529
           L  KL++LN+  C  L  LP +I  +KSLE L       L+ L   +  L+ L+TL ++ 
Sbjct: 666 LDKKLVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTTL-LAD 724

Query: 530 DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEIL-PVTVS 588
               RE P  +  ++ L  L L G   +GL     L   +  L  +   S+ +L PV++S
Sbjct: 725 FTALREIPSTINQLKKLKRLSLNGC--KGL-----LSDDIDNLYSEKSHSVSLLRPVSLS 777

Query: 589 NLKCLRSLKLSGCSKLKKF-PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
            L  +R L L  C+   +  PE + S+  L +L L G S   +P+    L  L  L LSD
Sbjct: 778 GLTYMRILSLGYCNLSDELIPEDIGSLSFLRDLDLRGNSFCNLPTDFATLPNLGELLLSD 837

Query: 648 CKNLVRLPSSIIAL-KSLKTLNLSGCFKLENVPE 680
           C  L     SI++L +SL  L++  C  L+  P+
Sbjct: 838 CSKL----QSILSLPRSLLFLDVGKCIMLKRTPD 867



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 192/432 (44%), Gaps = 70/432 (16%)

Query: 530 DLKFREFPEIVEHM-EHLSELHLEGTAIRGLP--LSIELLSGLVLL--NLKNCRSLEILP 584
           +L++ +     EH  + L  L   G ++   P  LS+E L+ L L   NLK     +  P
Sbjct: 557 ELRYVDLNGSYEHFPKDLRWLCWHGFSLECFPINLSLESLAALDLQYSNLKRFWKAQSPP 616

Query: 585 VTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELL-TKLELL 643
              + +K    L LS    L++ P+          + ++  S+  V  SI +L  KL LL
Sbjct: 617 QPANMVK---YLDLSHSVYLRETPDFSYFPNVEKLILINCKSLVLVHKSIGILDKKLVLL 673

Query: 644 NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTS 703
           NLS C  L  LP  I  LKSL++L LS C KLE + + LG++ESL  L    TA+    S
Sbjct: 674 NLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTTLLADFTALREIPS 733

Query: 704 WYSYIPINLMRK--------------------------SVALKLP-SLSGLCSLRKLNLT 736
                 IN ++K                          SV+L  P SLSGL  +R L+L 
Sbjct: 734 -----TINQLKKLKRLSLNGCKGLLSDDIDNLYSEKSHSVSLLRPVSLSGLTYMRILSLG 788

Query: 737 DCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP 796
            CNL +  +P DIG+L  L++L L  NSF +LPT    L  L  + L DC +LQS+  LP
Sbjct: 789 YCNLSDELIPEDIGSLSFLRDLDLRGNSFCNLPTDFATLPNLGELLLSDCSKLQSILSLP 848

Query: 797 PNI------------RQVRVNGCASL--------VTLLDALKLCKSDSTMIACLDSLKLL 836
            ++            R   ++ C++L        ++L +   +   +      LD  KL 
Sbjct: 849 RSLLFLDVGKCIMLKRTPDISKCSALFKLQLNDCISLFEIPGIHNHEYLSFIVLDGCKLA 908

Query: 837 GNKSLAFSMLREYLEAVSNTRQHLSVVVPGSE---IPEWFMYQNEGSSITVTRPSNLYNK 893
              +   +ML  +L+     R H  + +P      IP W  ++ E  S ++T P    N 
Sbjct: 909 STDTTINTMLENWLK-----RNHECIYIPVDRPNVIPNWVYFEEEKRSFSITVPET-DNS 962

Query: 894 KKLVGYAICCVF 905
             +VG+ +   F
Sbjct: 963 DTVVGFTLWMNF 974


>gi|255567754|ref|XP_002524855.1| ATP binding protein, putative [Ricinus communis]
 gi|223535818|gb|EEF37479.1| ATP binding protein, putative [Ricinus communis]
          Length = 673

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 232/467 (49%), Positives = 315/467 (67%), Gaps = 6/467 (1%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DSR + +  L+  G+ DVRMIGI GMGG+GKTTIA+ V++ +   FE   FL NV+EIS
Sbjct: 202 IDSRIKDVIVLLSVGTKDVRMIGIHGMGGIGKTTIAKAVFNQLCDGFEVRCFLSNVKEIS 261

Query: 61  SK-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            +  GL+ LQ QLL  +LK     I +V  GI+M+  R + K++L+VIDD+  +KQ  +L
Sbjct: 262 EQPNGLIQLQEQLLRAVLKPKSLQIGSVDRGINMIRERFRHKRLLVVIDDLDHMKQFNAL 321

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G+R WFG GSR+IITSRDEHLL    VDE Y+   L+++E+L+LF+  AF+   P+ + 
Sbjct: 322 MGDRTWFGLGSRLIITSRDEHLLAQLEVDEKYQVKELDHNESLELFSWHAFRKTHPVGDY 381

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V+LS  ++ Y GGLPLALEVLGS+L  RS+ EW S L +L+  P  +I   L++SFD L 
Sbjct: 382 VELSNGVVDYGGGLPLALEVLGSYLCKRSIPEWTSALRKLKRIPHHQIQRKLRLSFDTLD 441

Query: 240 ELE-KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDL 297
           + + K IFLDIACFF G DRDY    L+GCGF P IGI VLI++ L+TV + N L MHDL
Sbjct: 442 DDKVKDIFLDIACFFIGTDRDYAVKILDGCGFFPEIGISVLIQRSLVTVDSKNKLSMHDL 501

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           L+++G++IV+  SP + GKRSRLW +E+V  VL+   GTE VEG+VLD     + V    
Sbjct: 502 LRDMGREIVRELSPNQPGKRSRLWFQEDVLDVLSNQKGTEAVEGLVLDVESSRDAVL--- 558

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
           S ++F+ M  LRLLKI  + L    E+LS  LR L W   PLKFLP N Q+D  + + M 
Sbjct: 559 STESFANMRYLRLLKINKVHLTGCYEHLSKELRWLCWHSCPLKFLPHNFQLDNLVILDMQ 618

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
           YS I E+WK I+ L+KL+++ LSHSE L + P+FT   +LE+L LEG
Sbjct: 619 YSNIKEVWKEIRVLNKLQILNLSHSEYLAKTPNFTCLTSLERLELEG 665



 Score = 39.7 bits (91), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 34/222 (15%)

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLK 520
           IL+GC    EI  S+L+   L+ ++ K+  S+  L     ++ + +  ++ L     G +
Sbjct: 467 ILDGCGFFPEIGISVLIQRSLVTVDSKNKLSMHDL-----LRDMGREIVRELSPNQPGKR 521

Query: 521 CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT-AIRGLPLSIE-----LLSGLVLLNL 574
                     L F+E     + ++ LS  + +GT A+ GL L +E     +LS     N+
Sbjct: 522 --------SRLWFQE-----DVLDVLS--NQKGTEAVEGLVLDVESSRDAVLSTESFANM 566

Query: 575 KNCRSLEILPVTVSNL-----KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKE 629
           +  R L+I  V ++       K LR L    C  LK  P   + + +L  L +  ++IKE
Sbjct: 567 RYLRLLKINKVHLTGCYEHLSKELRWLCWHSCP-LKFLPHNFQ-LDNLVILDMQYSNIKE 624

Query: 630 VPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSG 671
           V   I +L KL++LNLS  + L + P +   L SL+ L L G
Sbjct: 625 VWKEIRVLNKLQILNLSHSEYLAKTP-NFTCLTSLERLELEG 665


>gi|15230522|ref|NP_190724.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|6572077|emb|CAB63020.1| disease resistance-like protein [Arabidopsis thaliana]
 gi|332645285|gb|AEE78806.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1253

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 316/977 (32%), Positives = 494/977 (50%), Gaps = 90/977 (9%)

Query: 3    SRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK 62
            S+  K+  L+      VR IGI GM G+GKTT+A+  +D +S ++EAS F+ +  +   +
Sbjct: 164  SKLGKIETLIYKQPWGVRSIGIWGMPGIGKTTLAKAAFDQLSGDYEASCFIKDFNKAFHE 223

Query: 63   GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGN 122
             GL  L      ++L+  +  I +      +L + L+ K+VL+V+DDV      +S  G 
Sbjct: 224  KGLYGLLEAHFGKILR-EELGIKSSITRPILLRNVLRHKRVLVVLDDVCKPLDAESFLGG 282

Query: 123  REWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQL 182
             +WF  GS IIITSRD+ +     VD++Y+  GLN +EALQLF+  AF      +   +L
Sbjct: 283  FDWFCPGSLIIITSRDKQVFSICRVDQIYEVPGLNEEEALQLFSRCAFGKEIIHESLQKL 342

Query: 183  SARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELE 242
            S ++I YA G PLAL   G  +S ++         +++     EI D ++ ++D L   E
Sbjct: 343  SKKVIDYANGNPLALIFFGC-MSRKNPKPIEIAFPKVKKYLAHEIHDAVKSTYDSLSSNE 401

Query: 243  KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELG 302
            K IFLDIAC F+G + D V + LEGCGF P + I VL+EKCL+++    + MH+L+Q +G
Sbjct: 402  KNIFLDIACLFRGENVDCVIHLLEGCGFFPRVEINVLVEKCLVSMAEGRVVMHNLIQSIG 461

Query: 303  QQIVQRQSPEELGKRSRLWKEEEVCHVLTEST--GTELVEGIVLDNYHHENEVYLCASAK 360
            ++I+         +RSRLWK   + + L +    G+E +E I LD     + +    +  
Sbjct: 462  RKIINGGK-----RRSRLWKPLIIKYFLEDRQVLGSEDIEAIFLD----PSALSFDVNPM 512

Query: 361  AFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
            AF  M NLR LKIC+        L LP G++ L   LRLL W  +PL  LP +      +
Sbjct: 513  AFENMYNLRYLKICSSNPGNHYALHLPKGVKSLPEELRLLHWEHFPLLSLPQDFNTRNLV 572

Query: 413  EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
             + MCYS++  LW+G K L  LK ++L HS+ L+ + +   A N+E + L+GC RL    
Sbjct: 573  ILNMCYSKLQRLWEGTKELGMLKRIMLCHSQQLVGIQELQIALNMEVIDLQGCARLQRFL 632

Query: 473  PSLLLHNKLIILNMKDC---TSLITLPGKILMKSLEKLNLKSLPTTI------------- 516
             +    + L ++N+  C    S   +P  I    L++  ++S+PT               
Sbjct: 633  ATGHFQH-LRVINLSGCIKIKSFPEVPPNIEELYLKQTGIRSIPTVTFSPQDNSFIYDHK 691

Query: 517  ----------SGLKCLSTLDVSGDLKFREFPEIVEHME------HLSELHLEGTAIRGLP 560
                      S  + LS +    +LK  +  + +E  +      +L +L+L GTAI+ LP
Sbjct: 692  DHKFLNREVSSDSQSLSIMVYLDNLKVLDLSQCLELEDIQGIPKNLRKLYLGGTAIKELP 751

Query: 561  LSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL 620
             S+  LS LV+L+L+NC+ L  LP+ + NL  L  L LSGCS+L+    I R   +L EL
Sbjct: 752  -SLMHLSELVVLDLENCKRLHKLPMGIGNLSSLAVLNLSGCSELEDIQGIPR---NLEEL 807

Query: 621  FLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLS--GCFKLENV 678
            +L GT+I+EV S I+ L++L +L+L +CK L  LP  I  LKSL TL L+      +  V
Sbjct: 808  YLAGTAIQEVTSLIKHLSELVVLDLQNCKRLQHLPMEISNLKSLVTLKLTDPSGMSIREV 867

Query: 679  PETLGQIESLEELDISG------TAVPHSTSWYSYIPINLMRKSVALKLPSLSGLC---- 728
              ++ Q   + E+ IS       T   ++     Y+P   +  S      SL GL     
Sbjct: 868  STSIIQ-NGISEIGISNLNYLLLTFNENAEQRREYLPRPRLPSS------SLHGLVPRFY 920

Query: 729  SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKR 788
            +L  L+L + +LM   +P +I +L S+  L L +N F  +P SI  LSKL ++ L  C+ 
Sbjct: 921  ALVSLSLFNASLMH--IPEEICSLPSVVLLDLGRNGFSKIPESIKQLSKLHSLRLRHCRN 978

Query: 789  LQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLRE 848
            L  LP LP +++ + V+GC SL ++    +   S  T   C +    +  K +   + + 
Sbjct: 979  LILLPALPQSLKLLNVHGCVSLESVSWGFEQFPSHYTFSDCFNKSPKVARKRVVKGLAK- 1037

Query: 849  YLEAVSNTRQH-------LSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAI 901
             + ++ N  Q         S+  P             GS  T+    +L  +K L+G+AI
Sbjct: 1038 -VASIGNEHQQELIKALAFSICGPAGADQATSYNLRAGSFATIEITPSL--RKTLLGFAI 1094

Query: 902  CCVFHVLKNSRGNNCFG 918
              V     +S  N   G
Sbjct: 1095 FVVVSFSDDSHNNAGLG 1111


>gi|359477821|ref|XP_003632029.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1510

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 265/666 (39%), Positives = 378/666 (56%), Gaps = 76/666 (11%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EKL+ LM++  + V +IGI G+GG+GKTTIA+ +Y+ ISH+++ S FL N++E  SKG +
Sbjct: 204 EKLKSLMNTELNMVSVIGIYGIGGVGKTTIAKAIYNEISHQYDGSSFLINIKE-RSKGDI 262

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
           + LQ++LL  +L+     I NV +G  M+   L+  +VL++ DDV ++KQL+ LA  ++W
Sbjct: 263 LQLQQELLHGILRGKFFKINNVNEGNSMIKRCLRSNRVLVIFDDVDELKQLEYLAEEKDW 322

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSAR 185
           F + S IIITSRD+H+L  +GVD  Y+   LN +EA++LF++ AFK  +P +    LS  
Sbjct: 323 FHAKSTIIITSRDKHVLAQYGVDIPYEVSKLNKEEAIELFSLWAFKQNRPQEVYKNLSYN 382

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           II YA GLPLAL+VLG+ L G+ +  W S L +L+I P  EI ++L+ISFDGL ++EK I
Sbjct: 383 IIDYADGLPLALKVLGASLFGKKISNWESALCKLKIIPHMEIHNVLRISFDGLDDIEKGI 442

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQI 305
           FLDIACFFKG+DRD+V+  L   G H    I  L ++CLITV  N L MHDL+Q++G +I
Sbjct: 443 FLDIACFFKGDDRDFVSRIL---GPHAEHAITTLDDRCLITVSKNMLDMHDLIQQMGWEI 499

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKM 365
           ++++ PE+ G+RSRLW       ++     TE                       +F +M
Sbjct: 500 IRQECPEDPGRRSRLWDSNANDVLIRNKITTE-----------------------SFKEM 536

Query: 366 TNLRLLKICNLQ---------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
             LRLL I N +         LP   E+ S  L  L W GYPL+ LP N      +++ +
Sbjct: 537 NRLRLLNIHNPREDQLFLKDHLPRDFEFSSYELTYLHWDGYPLESLPMNFHAKNLVQLVL 596

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             S I ++W+G K  DKL+V+ LS+S +LI +PDF+  PNLE LIL GCT          
Sbjct: 597 RGSNIKQVWRGNKLHDKLRVIDLSYSFHLIGIPDFSSVPNLEILILIGCT---------- 646

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
                    M  C                 +NL+ LP  I  LK L  L  +G  K   F
Sbjct: 647 ---------MHGC-----------------VNLELLPRNIYKLKHLQILSCNGCSKLERF 680

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
           PEI  +M  L  L L GTAI  LP SI  L+GL  L L+ C  L  +P+ + +L  L  L
Sbjct: 681 PEIKGNMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLQECSKLHKIPIHICHLSSLEVL 740

Query: 597 KLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL---V 652
            L  C+ ++   P  +  +  L +L L+      +P++I  L+ LE+LNLS C NL    
Sbjct: 741 DLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSSLEVLNLSHCNNLEQIT 800

Query: 653 RLPSSI 658
            LPS +
Sbjct: 801 ELPSCL 806



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/224 (40%), Positives = 131/224 (58%), Gaps = 31/224 (13%)

Query: 556  IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMK 615
            I G PL ++ L       L++C++L  LP ++   K L +L  SGCS+L+  PEI++ M+
Sbjct: 1090 IIGNPLELDSLC------LRDCKNLTSLPSSIFGFKSLATLSCSGCSQLESIPEILQDME 1143

Query: 616  DLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
             L +L L GT+IKE+PSSI+ L  L+ L LS+CKNLV LP SI  L SLK L +  C   
Sbjct: 1144 SLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVESCPSF 1203

Query: 676  ENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNL 735
            + +P+ LG+++SL  L +               P++    S+  +LPSLSGLCSLR+L L
Sbjct: 1204 KKLPDNLGRLQSLLHLSVG--------------PLD----SMNFQLPSLSGLCSLRQLEL 1245

Query: 736  TDCNLMEGALPSDIGNLCSL-KELYLSKNSFVS----LPTSITH 774
              CN+ E  +PS+I  L SL +E   S  +F +    +P  I+H
Sbjct: 1246 QACNIRE--IPSEICYLSSLGREFRRSVRTFFAESNGIPEWISH 1287



 Score =  132 bits (333), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 160/325 (49%), Gaps = 47/325 (14%)

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLS---------------------------- 646
           K+L +L L G++IK+V    +L  KL +++LS                            
Sbjct: 589 KNLVQLVLRGSNIKQVWRGNKLHDKLRVIDLSYSFHLIGIPDFSSVPNLEILILIGCTMH 648

Query: 647 DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTS 703
            C NL  LP +I  LK L+ L+ +GC KLE  PE  G +  L  LD+SGTA+   P S +
Sbjct: 649 GCVNLELLPRNIYKLKHLQILSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIMDLPSSIT 708

Query: 704 WYSYIPINLMRKSVAL-KLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLS 761
             + +   L+++   L K+P  +  L SL  L+L  CN+MEG +PSDI +L SL++L L 
Sbjct: 709 HLNGLQTLLLQECSKLHKIPIHICHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNLE 768

Query: 762 KNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCK 821
           +  F S+PT+I  LS L  + L  C  L+ + +LP  +R +  +G     +    L L  
Sbjct: 769 RGHFSSIPTTINQLSSLEVLNLSHCNNLEQITELPSCLRLLDAHGSNRTSSRAPFLPL-- 826

Query: 822 SDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSE-IPEWFMYQNEGS 880
              +++ C    +   + S   S         S   +   +V+PGS+ IPEW + + +  
Sbjct: 827 --HSLVNCFRWAQDWKHTSFRDS---------SYHGKGTCIVLPGSDGIPEWILNRGDNF 875

Query: 881 SITVTRPSNLYNKKKLVGYAICCVF 905
           S  +  P N +   + +G+AICCV+
Sbjct: 876 SSVIELPQNWHQNNEFLGFAICCVY 900



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 90/160 (56%), Gaps = 6/160 (3%)

Query: 508  NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
            NL SLP++I G K L+TL  SG  +    PEI++ ME L +L L GTAI+ +P SI+ L 
Sbjct: 1107 NLTSLPSSIFGFKSLATLSCSGCSQLESIPEILQDMESLRKLSLSGTAIKEIPSSIQRLR 1166

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF---LDG 624
            GL  L L NC++L  LP ++ NL  L+ L +  C   KK P+ +  ++ L  L    LD 
Sbjct: 1167 GLQYLLLSNCKNLVNLPESICNLTSLKFLIVESCPSFKKLPDNLGRLQSLLHLSVGPLDS 1226

Query: 625  TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSL 664
             +  ++P S+  L  L  L L  C N+  +PS I  L SL
Sbjct: 1227 MNF-QLP-SLSGLCSLRQLELQAC-NIREIPSEICYLSSL 1263



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 98/182 (53%), Gaps = 22/182 (12%)

Query: 569 LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIK 628
           L+   +  C +LE+LP  +  LK L+ L  +GCSKL++FPEI  +M+ L  L L GT+I 
Sbjct: 642 LIGCTMHGCVNLELLPRNIYKLKHLQILSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIM 701

Query: 629 EVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE-NVPETLGQIES 687
           ++PSSI  L  L+ L L +C  L ++P  I  L SL+ L+L  C  +E  +P  +  + S
Sbjct: 702 DLPSSITHLNGLQTLLLQECSKLHKIPIHICHLSSLEVLDLGHCNIMEGGIPSDICHLSS 761

Query: 688 LEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLME--GAL 745
           L++L++           +S IP             +++ L SL  LNL+ CN +E    L
Sbjct: 762 LQKLNL-------ERGHFSSIPT------------TINQLSSLEVLNLSHCNNLEQITEL 802

Query: 746 PS 747
           PS
Sbjct: 803 PS 804



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 146/350 (41%), Gaps = 38/350 (10%)

Query: 723  SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIE 782
            S+ G  SL  L+ + C+ +E ++P  + ++ SL++L LS  +   +P+SI  L  L  + 
Sbjct: 1114 SIFGFKSLATLSCSGCSQLE-SIPEILQDMESLRKLSLSGTAIKEIPSSIQRLRGLQYLL 1172

Query: 783  LEDCKRLQSLPQLPPNIRQVR---VNGCASLVTLLDALKLCKSDSTM-IACLDSLKL--- 835
            L +CK L +LP+   N+  ++   V  C S   L D L   +S   + +  LDS+     
Sbjct: 1173 LSNCKNLVNLPESICNLTSLKFLIVESCPSFKKLPDNLGRLQSLLHLSVGPLDSMNFQLP 1232

Query: 836  -------LGNKSLAFSMLRE------YLEAVSNT--RQHLSVVVPGSEIPEWFMYQNEGS 880
                   L    L    +RE      YL ++     R   +     + IPEW  +Q  G 
Sbjct: 1233 SLSGLCSLRQLELQACNIREIPSEICYLSSLGREFRRSVRTFFAESNGIPEWISHQKSGF 1292

Query: 881  SITVTRPSNLYNKKKLVGYAICCVFHVL----KNSRGNNCFGSYPTHQLNCHIGHGIYGI 936
             IT+  P + Y     +G+ +C ++  L    K  R  +C  ++     +          
Sbjct: 1293 KITMKLPWSWYENDDFLGFVLCSLYVPLEIETKTHRIFSCILNFGDDSDSFLFDDLRLEQ 1352

Query: 937  GFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLG-QGLEVKM 995
                 + +  S+   L+Y S+    DI     SN    E   +N SF  + G + ++   
Sbjct: 1353 ICECCYYEDASNQGLLVYYSKS---DIPEKFHSN----EWRTLNASFNVYFGIKPVKAAR 1405

Query: 996  CGLHPVYMDEVEELDQTTNQPSRFTVYNLNEFDQHFVGSKMIVATTSKRS 1045
            CG H +Y  + E+ + T  Q S  +  +L     H    +    T S+RS
Sbjct: 1406 CGFHFLYAHDYEQNNLTMVQGSSSSHVDLG---GHRSAVQDTNGTHSQRS 1452


>gi|10178211|dbj|BAB11635.1| TMV resistance protein N [Arabidopsis thaliana]
          Length = 1130

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 277/694 (39%), Positives = 399/694 (57%), Gaps = 35/694 (5%)

Query: 3   SRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK 62
           SR + +  L+  GS  VR+I I GMGG+GKTT+A+V ++  SH FE S FL+N RE S K
Sbjct: 198 SRLQHISSLLSIGSDGVRVIVIYGMGGIGKTTLAKVAFNEFSHLFEGSSFLENFREYSKK 257

Query: 63  G-GLVSLQRQLLSQLLKLADNSIWNVFDGID-MLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
             G   LQ QLLS +L+  D      F G+D  +  R + K+VLLV+DDV DV QL S A
Sbjct: 258 PEGRTHLQHQLLSDILRRNDIE----FKGLDHAVKERFRSKRVLLVVDDVDDVHQLNSAA 313

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            +R+ FG GSRIIIT+R+ HLLK    +  Y P  L+ DE+L+LF+  AF+T +P +E +
Sbjct: 314 IDRDCFGHGSRIIITTRNMHLLKQLRAEGSYSPKELDGDESLELFSWHAFRTSEPPKEFL 373

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           Q S  ++ Y  GLPLA+EVLG+FL  RS+ EW STL+ L+  P   I   LQISF+ L  
Sbjct: 374 QHSEEVVTYCAGLPLAVEVLGAFLIERSIREWESTLKLLKRIPNDNIQAKLQISFNALTI 433

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            +K +FLDIACFF G D  YV   L+GC  +P I + +L+E+CLIT+  N + MHDLL++
Sbjct: 434 EQKDVFLDIACFFIGVDSYYVACILDGCNLYPDIVLSLLMERCLITISGNNIMMHDLLRD 493

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G+QIV+  SP++ G+RSRLW   +V  VL + +GT  +EG+ L     + + +     +
Sbjct: 494 MGRQIVREISPKKCGERSRLWSHNDVVGVLKKKSGTNAIEGLSLKADVMDFQYF---EVE 550

Query: 361 AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
           AF+KM  LRLL++  + L    E+    LR L W G+ L+  P NL ++    + + YS 
Sbjct: 551 AFAKMQELRLLELRYVDLNGSYEHFPKDLRWLCWHGFSLECFPINLSLESLAALDLQYSN 610

Query: 421 IGELWKG---IKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL-L 476
           +   WK     +  + +K + LSHS  L   PDF+  PN+EKLIL  C  L  +H S+ +
Sbjct: 611 LKRFWKAQSPPQPANMVKYLDLSHSVYLRETPDFSYFPNVEKLILINCKSLVLVHKSIGI 670

Query: 477 LHNKLIILNMKDCTSLITLPGKIL-MKSLEKL------NLKSLPTTISGLKCLSTLDVSG 529
           L  KL++LN+  C  L  LP +I  +KSLE L       L+ L   +  L+ L+TL ++ 
Sbjct: 671 LDKKLVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTTL-LAD 729

Query: 530 DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEIL-PVTVS 588
               RE P  +  ++ L  L L G   +GL     L   +  L  +   S+ +L PV++S
Sbjct: 730 FTALREIPSTINQLKKLKRLSLNGC--KGL-----LSDDIDNLYSEKSHSVSLLRPVSLS 782

Query: 589 NLKCLRSLKLSGCSKLKKF-PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
            L  +R L L  C+   +  PE + S+  L +L L G S   +P+    L  L  L LSD
Sbjct: 783 GLTYMRILSLGYCNLSDELIPEDIGSLSFLRDLDLRGNSFCNLPTDFATLPNLGELLLSD 842

Query: 648 CKNLVRLPSSIIAL-KSLKTLNLSGCFKLENVPE 680
           C  L     SI++L +SL  L++  C  L+  P+
Sbjct: 843 CSKL----QSILSLPRSLLFLDVGKCIMLKRTPD 872



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 192/432 (44%), Gaps = 70/432 (16%)

Query: 530 DLKFREFPEIVEHM-EHLSELHLEGTAIRGLP--LSIELLSGLVLL--NLKNCRSLEILP 584
           +L++ +     EH  + L  L   G ++   P  LS+E L+ L L   NLK     +  P
Sbjct: 562 ELRYVDLNGSYEHFPKDLRWLCWHGFSLECFPINLSLESLAALDLQYSNLKRFWKAQSPP 621

Query: 585 VTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELL-TKLELL 643
              + +K    L LS    L++ P+          + ++  S+  V  SI +L  KL LL
Sbjct: 622 QPANMVK---YLDLSHSVYLRETPDFSYFPNVEKLILINCKSLVLVHKSIGILDKKLVLL 678

Query: 644 NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTS 703
           NLS C  L  LP  I  LKSL++L LS C KLE + + LG++ESL  L    TA+    S
Sbjct: 679 NLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTTLLADFTALREIPS 738

Query: 704 WYSYIPINLMRK--------------------------SVALKLP-SLSGLCSLRKLNLT 736
                 IN ++K                          SV+L  P SLSGL  +R L+L 
Sbjct: 739 -----TINQLKKLKRLSLNGCKGLLSDDIDNLYSEKSHSVSLLRPVSLSGLTYMRILSLG 793

Query: 737 DCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP 796
            CNL +  +P DIG+L  L++L L  NSF +LPT    L  L  + L DC +LQS+  LP
Sbjct: 794 YCNLSDELIPEDIGSLSFLRDLDLRGNSFCNLPTDFATLPNLGELLLSDCSKLQSILSLP 853

Query: 797 PNI------------RQVRVNGCASL--------VTLLDALKLCKSDSTMIACLDSLKLL 836
            ++            R   ++ C++L        ++L +   +   +      LD  KL 
Sbjct: 854 RSLLFLDVGKCIMLKRTPDISKCSALFKLQLNDCISLFEIPGIHNHEYLSFIVLDGCKLA 913

Query: 837 GNKSLAFSMLREYLEAVSNTRQHLSVVVPGSE---IPEWFMYQNEGSSITVTRPSNLYNK 893
              +   +ML  +L+     R H  + +P      IP W  ++ E  S ++T P    N 
Sbjct: 914 STDTTINTMLENWLK-----RNHECIYIPVDRPNVIPNWVYFEEEKRSFSITVPET-DNS 967

Query: 894 KKLVGYAICCVF 905
             +VG+ +   F
Sbjct: 968 DTVVGFTLWMNF 979


>gi|186527047|ref|NP_001119319.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332006746|gb|AED94129.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1191

 Score =  401 bits (1030), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 277/694 (39%), Positives = 399/694 (57%), Gaps = 35/694 (5%)

Query: 3   SRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK 62
           SR + +  L+  GS  VR+I I GMGG+GKTT+A+V ++  SH FE S FL+N RE S K
Sbjct: 196 SRLQHISSLLSIGSDGVRVIVIYGMGGIGKTTLAKVAFNEFSHLFEGSSFLENFREYSKK 255

Query: 63  G-GLVSLQRQLLSQLLKLADNSIWNVFDGID-MLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
             G   LQ QLLS +L+  D      F G+D  +  R + K+VLLV+DDV DV QL S A
Sbjct: 256 PEGRTHLQHQLLSDILRRNDIE----FKGLDHAVKERFRSKRVLLVVDDVDDVHQLNSAA 311

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            +R+ FG GSRIIIT+R+ HLLK    +  Y P  L+ DE+L+LF+  AF+T +P +E +
Sbjct: 312 IDRDCFGHGSRIIITTRNMHLLKQLRAEGSYSPKELDGDESLELFSWHAFRTSEPPKEFL 371

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           Q S  ++ Y  GLPLA+EVLG+FL  RS+ EW STL+ L+  P   I   LQISF+ L  
Sbjct: 372 QHSEEVVTYCAGLPLAVEVLGAFLIERSIREWESTLKLLKRIPNDNIQAKLQISFNALTI 431

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            +K +FLDIACFF G D  YV   L+GC  +P I + +L+E+CLIT+  N + MHDLL++
Sbjct: 432 EQKDVFLDIACFFIGVDSYYVACILDGCNLYPDIVLSLLMERCLITISGNNIMMHDLLRD 491

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G+QIV+  SP++ G+RSRLW   +V  VL + +GT  +EG+ L     + + +     +
Sbjct: 492 MGRQIVREISPKKCGERSRLWSHNDVVGVLKKKSGTNAIEGLSLKADVMDFQYF---EVE 548

Query: 361 AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
           AF+KM  LRLL++  + L    E+    LR L W G+ L+  P NL ++    + + YS 
Sbjct: 549 AFAKMQELRLLELRYVDLNGSYEHFPKDLRWLCWHGFSLECFPINLSLESLAALDLQYSN 608

Query: 421 IGELWKG---IKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL-L 476
           +   WK     +  + +K + LSHS  L   PDF+  PN+EKLIL  C  L  +H S+ +
Sbjct: 609 LKRFWKAQSPPQPANMVKYLDLSHSVYLRETPDFSYFPNVEKLILINCKSLVLVHKSIGI 668

Query: 477 LHNKLIILNMKDCTSLITLPGKIL-MKSLEKL------NLKSLPTTISGLKCLSTLDVSG 529
           L  KL++LN+  C  L  LP +I  +KSLE L       L+ L   +  L+ L+TL ++ 
Sbjct: 669 LDKKLVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTTL-LAD 727

Query: 530 DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEIL-PVTVS 588
               RE P  +  ++ L  L L G   +GL     L   +  L  +   S+ +L PV++S
Sbjct: 728 FTALREIPSTINQLKKLKRLSLNGC--KGL-----LSDDIDNLYSEKSHSVSLLRPVSLS 780

Query: 589 NLKCLRSLKLSGCSKLKKF-PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
            L  +R L L  C+   +  PE + S+  L +L L G S   +P+    L  L  L LSD
Sbjct: 781 GLTYMRILSLGYCNLSDELIPEDIGSLSFLRDLDLRGNSFCNLPTDFATLPNLGELLLSD 840

Query: 648 CKNLVRLPSSIIAL-KSLKTLNLSGCFKLENVPE 680
           C  L     SI++L +SL  L++  C  L+  P+
Sbjct: 841 CSKL----QSILSLPRSLLFLDVGKCIMLKRTPD 870



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 192/432 (44%), Gaps = 70/432 (16%)

Query: 530 DLKFREFPEIVEHM-EHLSELHLEGTAIRGLP--LSIELLSGLVLL--NLKNCRSLEILP 584
           +L++ +     EH  + L  L   G ++   P  LS+E L+ L L   NLK     +  P
Sbjct: 560 ELRYVDLNGSYEHFPKDLRWLCWHGFSLECFPINLSLESLAALDLQYSNLKRFWKAQSPP 619

Query: 585 VTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELL-TKLELL 643
              + +K    L LS    L++ P+          + ++  S+  V  SI +L  KL LL
Sbjct: 620 QPANMVK---YLDLSHSVYLRETPDFSYFPNVEKLILINCKSLVLVHKSIGILDKKLVLL 676

Query: 644 NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTS 703
           NLS C  L  LP  I  LKSL++L LS C KLE + + LG++ESL  L    TA+    S
Sbjct: 677 NLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTTLLADFTALREIPS 736

Query: 704 WYSYIPINLMRK--------------------------SVALKLP-SLSGLCSLRKLNLT 736
                 IN ++K                          SV+L  P SLSGL  +R L+L 
Sbjct: 737 -----TINQLKKLKRLSLNGCKGLLSDDIDNLYSEKSHSVSLLRPVSLSGLTYMRILSLG 791

Query: 737 DCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP 796
            CNL +  +P DIG+L  L++L L  NSF +LPT    L  L  + L DC +LQS+  LP
Sbjct: 792 YCNLSDELIPEDIGSLSFLRDLDLRGNSFCNLPTDFATLPNLGELLLSDCSKLQSILSLP 851

Query: 797 PNI------------RQVRVNGCASL--------VTLLDALKLCKSDSTMIACLDSLKLL 836
            ++            R   ++ C++L        ++L +   +   +      LD  KL 
Sbjct: 852 RSLLFLDVGKCIMLKRTPDISKCSALFKLQLNDCISLFEIPGIHNHEYLSFIVLDGCKLA 911

Query: 837 GNKSLAFSMLREYLEAVSNTRQHLSVVVPGSE---IPEWFMYQNEGSSITVTRPSNLYNK 893
              +   +ML  +L+     R H  + +P      IP W  ++ E  S ++T P    N 
Sbjct: 912 STDTTINTMLENWLK-----RNHECIYIPVDRPNVIPNWVYFEEEKRSFSITVPET-DNS 965

Query: 894 KKLVGYAICCVF 905
             +VG+ +   F
Sbjct: 966 DTVVGFTLWMNF 977


>gi|357499823|ref|XP_003620200.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355495215|gb|AES76418.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1437

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 253/664 (38%), Positives = 389/664 (58%), Gaps = 48/664 (7%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLS----QLLKLADNSIWNV 87
           KTT+AR VY+ +S +F++S F+ +VRE S K GLV LQ  LL     + +KL D     V
Sbjct: 258 KTTLARAVYNSMSRKFDSSSFVVDVRENSMKHGLVHLQETLLLHLLFENIKLDD-----V 312

Query: 88  FDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGV 147
             GI ++  RL+ KKVLL++DDV +++QL+SL G R+WFG GS+IIIT+RD+HLL  HGV
Sbjct: 313 SKGIPIIKRRLRNKKVLLILDDVDNLQQLRSLVGRRDWFGFGSKIIITTRDKHLLAAHGV 372

Query: 148 DEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGR 207
            ++Y+   LN  E+L+LF+M AF+   P     ++   +++YA G PLAL V+GS L G+
Sbjct: 373 KKLYEVKELNDHESLELFSMNAFRKNVPDASYGEIVKCVVQYAKGHPLALNVIGSDLFGK 432

Query: 208 SVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEG 267
           +V+EW+S L + E  P  EIL++L++S+D L + EK+IFLDIACFFKG  +  V   L+ 
Sbjct: 433 TVEEWKSALNKYETIPNKEILNVLKVSYDNLDDNEKEIFLDIACFFKGYPKADVEKTLDA 492

Query: 268 CGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEV 326
             F+   GI VL++K L+T+  +N++ MHDL+++LG+ I +++SP +  KR RLW  E+V
Sbjct: 493 SRFYSKYGIGVLVDKSLVTISESNSVKMHDLIEDLGKDIARKESPFDPSKRRRLWHHEDV 552

Query: 327 CHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLS 386
             VLTE+ GT+ +EGIVLD  + + EV L   A  F  M  LR+L + N Q+    + L 
Sbjct: 553 LEVLTENMGTDTIEGIVLDMPNLKQEVQL--KANTFDDMKRLRILIVRNGQVSGAPQNLP 610

Query: 387 NRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLI 446
           N LRLL W  YPL  LP +      + + +  S I  + +  K  + L  M  S  ++L 
Sbjct: 611 NNLRLLEWNKYPLTSLPDSFHPKTLVVLNLPKSHIT-MDEPFKKFEHLTFMNFSDCDSLT 669

Query: 447 RMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEK 506
           ++PD +  PNL ++++  C  L +IH S+   +KL+ L+ + C +L + P  +  K LE 
Sbjct: 670 KLPDVSATPNLTRILVNNCENLVDIHESIGDLDKLVTLSTEGCPNLKSFPRGLRSKYLEY 729

Query: 507 LNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELL 566
           LNL+         KC S++D         FP+++  +E++  + + GTAI+  P SIE  
Sbjct: 730 LNLR---------KC-SSID--------NFPDVLAKVENMKNIDIGGTAIKKFPSSIENF 771

Query: 567 SGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKD--------LS 618
            GL  L L +C ++E LP      + +  L + GC +L K   + +S+++        LS
Sbjct: 772 KGLEELVLTSCSNVEDLPSNTDMFQNIDELNVEGCPQLPKL--LWKSLENRTTDWLPKLS 829

Query: 619 ELFLDGTSIKEVPSSIELLTK----LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
            L L   ++ +    +EL+ K    L+ L LSD  N + +P  I  L  L  LN+  C  
Sbjct: 830 NLSLKNCNLSD--EDLELILKCFLQLKWLILSD-NNFLTIPVCIKDLSHLLLLNIENCKH 886

Query: 675 LENV 678
           L ++
Sbjct: 887 LRDI 890


>gi|82542047|gb|ABB82031.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1146

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 263/710 (37%), Positives = 392/710 (55%), Gaps = 46/710 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD     +   + + + DVR++G+ GM G+GKTTIA+VV++ + H FE S FL ++ E S
Sbjct: 233 MDRLAHNIFDFLSTATDDVRIVGVHGMPGIGKTTIAQVVFNQLCHGFEGSCFLSDINERS 292

Query: 61  SK-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            +  GLV  Q+QLL  +LK    +   V  G  ++  RL+RK+VL+V DD+    QL +L
Sbjct: 293 KQVNGLVPFQKQLLHDILKQDVANFDCVDRGKVLIKERLRRKRVLVVADDMAHPDQLNAL 352

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G+R WFG  SR+IIT+R   LL+    D+ Y+   L  DEALQLF+  AFK  +P ++ 
Sbjct: 353 MGDRSWFGPRSRLIITTRYSSLLRE--ADQTYQIKELEPDEALQLFSWHAFKDTKPAEDY 410

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           ++LS + + Y GGLPLALEV+G+ L G+    W S ++ L   P S I   L ISFD L 
Sbjct: 411 IELSKKAVDYCGGLPLALEVIGALLYGKEKHRWESEIDNLSRIPESNIQGKLLISFDALD 470

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
              +  FLDIACFF   +++YV   L   C ++P + +  L E+ L+ V  + + MHDLL
Sbjct: 471 GELRNAFLDIACFFIDVEKEYVAKLLGARCRYNPEVVLETLRERSLVKVFGDMVTMHDLL 530

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           +++G+++V + SP+E GKR+R+W +++  +VL +  GT++VEG+ LD    E +     S
Sbjct: 531 RDMGREVVCKASPKEPGKRTRIWNQKDAWNVLEQQKGTDVVEGLALDVRASEAK---SLS 587

Query: 359 AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
             +F+KM  L LL+I    L    + LS  L  + W   P K+ PS+  +D  + + M Y
Sbjct: 588 TGSFAKMKRLNLLQINGAHLTGSFKLLSKELMWICWLQCPSKYFPSDFTLDNLVVLDMQY 647

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           S + ELWKG K L++LK++ LSHS++LI+ P+   + +LEKLIL+GC+ L ++H S+   
Sbjct: 648 SNLKELWKGKKILNRLKIINLSHSQHLIKTPNLHSS-SLEKLILKGCSSLVDVHQSIGNL 706

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
             L+ LN++ C S                 LK LP +I  +K L TL++SG  +  + PE
Sbjct: 707 TSLVFLNLEGCWS-----------------LKILPKSIGNVKSLETLNISGCSQLEKLPE 749

Query: 539 IVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL---EILPVTVSNLK---- 591
            +  ME L++L  +G        SI  L  +  L+L+   S     ++   V N K    
Sbjct: 750 HMGDMESLTKLLADGIENEQFLSSIGQLKYVRRLSLRGYNSAPSSSLISAGVLNWKRWLP 809

Query: 592 ------CLRSLKLSGCSKLKKFPEIV--RSMKDLSELFLDGTSIKEVPSSIELLTKLELL 643
                  ++SLKLS  S   +    V  R +  L EL L G     +PS I  L KL  L
Sbjct: 810 TSFEWRSVKSLKLSNGSLSDRATNCVDFRGLFALEELDLSGNKFSSLPSGIGFLPKLGFL 869

Query: 644 NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDI 693
           ++  CK LV +P       SL+ L  S C  LE V      IES +EL I
Sbjct: 870 SVRACKYLVSIPD---LPSSLRCLGASSCKSLERVRIP---IESKKELYI 913



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 201/472 (42%), Gaps = 71/472 (15%)

Query: 579  SLEILPVTVSNLK----------CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSI 627
            +L +L +  SNLK           L+ + LS    L K P +  S   L +L L G +S+
Sbjct: 639  NLVVLDMQYSNLKELWKGKKILNRLKIINLSHSQHLIKTPNLHSS--SLEKLILKGCSSL 696

Query: 628  KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
             +V  SI  LT L  LNL  C +L  LP SI  +KSL+TLN+SGC +LE +PE +G +ES
Sbjct: 697  VDVHQSIGNLTSLVFLNLEGCWSLKILPKSIGNVKSLETLNISGCSQLEKLPEHMGDMES 756

Query: 688  LEELDISGTAVPH--------------STSWYSYIPINLMRKSVALK----LPSLSGLCS 729
            L +L   G                   S   Y+  P + +  +  L     LP+     S
Sbjct: 757  LTKLLADGIENEQFLSSIGQLKYVRRLSLRGYNSAPSSSLISAGVLNWKRWLPTSFEWRS 816

Query: 730  LRKLNLTDCNLMEGALPS-DIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKR 788
            ++ L L++ +L + A    D   L +L+EL LS N F SLP+ I  L KL  + +  CK 
Sbjct: 817  VKSLKLSNGSLSDRATNCVDFRGLFALEELDLSGNKFSSLPSGIGFLPKLGFLSVRACKY 876

Query: 789  LQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDS---------------- 832
            L S+P LP ++R +  + C SL  +   ++  K        LD                 
Sbjct: 877  LVSIPDLPSSLRCLGASSCKSLERVRIPIESKKELYIFHIYLDESHSLEEIQGIEGLSNI 936

Query: 833  LKLLGNKSLAFS---MLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSN 889
               +G  S   S   + +  +EA+ N      +     E+P W  Y  EG S++   P  
Sbjct: 937  FWYIGVDSREHSRNKLQKSVVEAMCNGGHRYCISCLPGEMPNWLSYSEEGCSLSFHIPPV 996

Query: 890  LYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDH 949
                + LV + +C +           CF +     +  +  +GI    F DK  +  +  
Sbjct: 997  F---RGLVVWFVCPL-----EKEDYYCFNTDIIIIIIRNKSNGIQ--LFEDK--RTPAPW 1044

Query: 950  LWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPV 1001
             W+ Y+SR          +  LE F S + N  FE        +K CG+H +
Sbjct: 1045 GWIRYISRSEMAMEDYCGDDELELF-SAYSNGRFE-------HIKECGVHVI 1088


>gi|359496032|ref|XP_003635136.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1050

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 271/699 (38%), Positives = 387/699 (55%), Gaps = 80/699 (11%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M+    KL  L+   S+ V M+GI GMGG+GKTT+ARV+Y+ +  +FE   FL+ ++  S
Sbjct: 182 MNCCIRKLESLLCLESTKVLMVGIWGMGGIGKTTLARVIYERLFCQFEGYCFLEGLKSTS 241

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
               + +L+ +LLS++L        N+  G+  + +RL  KKVLLVIDDV     L++L 
Sbjct: 242 ----MDNLKAELLSKVLGNK-----NINMGLTSIKARLHSKKVLLVIDDVNHQSMLETLV 292

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G  +WFG  SRIIIT+RD+HLL   GVD VYK   L  D  L                  
Sbjct: 293 GGHDWFGPQSRIIITTRDKHLLTVQGVDVVYKVQKLEDDNLLD----------------- 335

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
               +I  YA GLPLAL+VLG  L  R+ D W   L +L+  P  EI ++LQISF GL++
Sbjct: 336 ----QITSYAQGLPLALKVLGCSLCDRNADYWTDMLNQLKKFPNEEIQEVLQISFRGLKD 391

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQ 299
            EK IFLDIACFF+G  + +V   LE CGF  V GI  LI+K LIT+  +N L MHDLLQ
Sbjct: 392 NEKDIFLDIACFFRGRGKTFVRKILESCGFTVVSGIENLIDKSLITLTRDNRLEMHDLLQ 451

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G QIV R++ +E GKRSRLW+++++ H+L   TG + VEGI  +    E   +   + 
Sbjct: 452 EMGWQIV-RKTSKEPGKRSRLWEQKDISHILKWETGAQEVEGIFFNLSGLEEMNF---TT 507

Query: 360 KAFSKMTNLRLLKI-------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNL 406
           KAFS+MTNLRLL+I             C L + +  ++  + LR L W  YP + LPS+ 
Sbjct: 508 KAFSQMTNLRLLEIYRSNLRDTGGKMQCKLHISDDFKFHYDELRYLHWDEYPCESLPSDF 567

Query: 407 QMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
           + +  +   M  S + +LWKG K    L+ + +S+S+ L + PDF+ A NLE L+L+GCT
Sbjct: 568 ESENLVHFCMPRSHLTQLWKGQKVFGHLEFVDVSYSQYLKKTPDFSRATNLEVLVLKGCT 627

Query: 467 RLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLD 526
            L ++HPSL   +KLI+LNM++C                 +NL+ LP +I  L  L T  
Sbjct: 628 NLRKVHPSLGYLSKLILLNMENC-----------------INLEHLP-SIRWLVSLRTFI 669

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVT 586
           +SG  K  +  E+ +HM +LS+L L+GTAI       EL  G    N  N   L  L   
Sbjct: 670 LSGCSKLEKLQEVPQHMPYLSKLCLDGTAITDFSGWSEL--GNFQENSGNLDCLSELNSD 727

Query: 587 VSNLKCLRSLKL---------SGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELL 637
            S ++   S  +         S   +  +F     ++  L+ L L GTSI  +P ++E L
Sbjct: 728 DSTIRQQHSSSVVLRNHNASPSSAPRRSRFISPHCTLTSLTYLNLSGTSIIHLPWNLERL 787

Query: 638 TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
           + L+ L L++C+ L  LP   +   S++ +N S C  LE
Sbjct: 788 SMLKRLELTNCRRLQALP---VLPSSIECMNASNCTSLE 823



 Score =  132 bits (333), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 150/521 (28%), Positives = 222/521 (42%), Gaps = 64/521 (12%)

Query: 517  SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
            +G K    L +S D KF        H + L  LH +      LP   E  +   L++   
Sbjct: 529  TGGKMQCKLHISDDFKF--------HYDELRYLHWDEYPCESLPSDFESEN---LVHFCM 577

Query: 577  CRS-LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSI 634
             RS L  L         L  + +S    LKK P+  R+  +L  L L G T++++V  S+
Sbjct: 578  PRSHLTQLWKGQKVFGHLEFVDVSYSQYLKKTPDFSRAT-NLEVLVLKGCTNLRKVHPSL 636

Query: 635  ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
              L+KL LLN+ +C NL  LPS I  L SL+T  LSGC KLE + E    +  L +L + 
Sbjct: 637  GYLSKLILLNMENCINLEHLPS-IRWLVSLRTFILSGCSKLEKLQEVPQHMPYLSKLCLD 695

Query: 695  GTAVPHSTSWYSYIPINLMRKSVALKLPSL--SGLCSLRKLN-----LTDCNLMEGALP- 746
            GTA+   + W      N    S  L   S   S   ++R+ +     L + N    + P 
Sbjct: 696  GTAITDFSGWSELG--NFQENSGNLDCLSELNSDDSTIRQQHSSSVVLRNHNASPSSAPR 753

Query: 747  -----SDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQ 801
                 S    L SL  L LS  S + LP ++  LS L  +EL +C+RLQ+LP LP +I  
Sbjct: 754  RSRFISPHCTLTSLTYLNLSGTSIIHLPWNLERLSMLKRLELTNCRRLQALPVLPSSIEC 813

Query: 802  VRVNGCASL--------------VTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLR 847
            +  + C SL                  +  KL    S M   + S   + + ++  +   
Sbjct: 814  MNASNCTSLELISPQSVFKRFGGFLFGNCFKLRNCHSKMEHDVQS---VASHAVPGTWRD 870

Query: 848  EYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHV 907
             Y     N     S V PGSEIP+WF + ++G  I +  P + Y     +G+A+  V   
Sbjct: 871  TYAIWHPNVAIPFSTVFPGSEIPDWFRHHSQGHEINIEVPPDWYINSNFLGFALSAVMAP 930

Query: 908  LKNSRGNNCFGSYPTHQL----NCHIGHGIYG-IGFRDKFGQAGSDHLWLLYLSRQTCYD 962
              +SR    +    TH L    N H     +G   ++ +     SDH+WL Y        
Sbjct: 931  QHDSRAWCMYCDLDTHDLNSNSNSHRICSFFGSWTYQLQRTPIESDHVWLAY-------- 982

Query: 963  IRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYM 1003
              +P   +    + +H+  SF      G  VK CG  PVY+
Sbjct: 983  --VPSFFSFSREKWSHIKFSFSS--SGGCVVKSCGFCPVYI 1019


>gi|342365831|gb|AEL30364.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 874

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 285/740 (38%), Positives = 401/740 (54%), Gaps = 76/740 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DSR E +  L+  G +DVR + I GMGG+GKTTIAR V++ I   FE S FL +VRE  
Sbjct: 7   IDSRVEGVINLIGLGLNDVRYMVIWGMGGIGKTTIARAVFETIRSRFEVSCFLADVREHC 66

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            K   V +Q+QLL Q+  ++  +++N +DG  ++ + L  KKVLLV+DDV   KQL+ LA
Sbjct: 67  EKKDTVHIQKQLLDQM-NISSYAVYNKYDGRRIIQNSLCLKKVLLVLDDVNHEKQLEDLA 125

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G ++WFG GSRIIIT+RD  +LK   V E+YK  GL   EAL LF +KAFK  +P +  +
Sbjct: 126 GEKDWFGPGSRIIITTRDVEVLKGPEVHEIYKVEGLVESEALNLFCLKAFKQQEPTEGFL 185

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEI---LDILQISFDG 237
            LS  +++Y+GGLPLAL+VLGS+L+G+         E+   E    I   +  L+IS++G
Sbjct: 186 DLSKEVVKYSGGLPLALKVLGSYLNGQK--------EKSSHEDNYNIFMGVSTLKISYEG 237

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN------NT 291
           L++ EK IFLDIACFFKG  + +VT  L+ CG+   IG+ +LI + L+T+         T
Sbjct: 238 LEDTEKDIFLDIACFFKGRQKHHVTEMLKRCGYQAEIGLDILINRSLVTLEEVKILGMVT 297

Query: 292 LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
           L MHDLL+E+G+QIV ++SP +  KRSRLW  E+V  VLT+   +E    IV   Y+ E 
Sbjct: 298 LGMHDLLEEMGKQIVIQESPNDASKRSRLWCYEDVDFVLTQKKESEATHSIVSKVYYCET 357

Query: 352 EVYLCASAKAFSKMTNLRLLKICNLQL--PNGLEY-----LSNRLRLLGWRGYPLKFLPS 404
           E       +      +L    IC L+L   +G+       +   L++L W G P++ LP 
Sbjct: 358 EEEWREYREIKENWRDLSFSNICQLKLLILDGVNAPILCDIPCTLKVLHWEGCPMETLPF 417

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
             Q  + +EI + + +I ELW G K L KL+ + L   E L + PD +GAPNL+ L L G
Sbjct: 418 TDQCYELVEIDLSHGKIVELWDGKKVLKKLEHLNLYFCEKLKQTPDLSGAPNLKTLNLHG 477

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLST 524
           C  L  I+PSL  H +L+ LN+  C SL TL  K+ + SLEKLNL          +C S 
Sbjct: 478 CKELNYINPSLAHHKRLVELNLGRCRSLETLGDKLEISSLEKLNL---------YECRS- 527

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
                    R  PE  E M+ LS L LE T I  LP ++  L+G+  L+L  C  L  LP
Sbjct: 528 --------LRRLPEFGECMKQLSILDLEKTGIEELPPTLGKLAGVSELDLTGCHKLTSLP 579

Query: 585 VTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSI----------------- 627
             +     L+ LKLS   +L   P     ++ L       + I                 
Sbjct: 580 FPLGCFVGLKKLKLSRFVELSCVPYTTHGLESLEAWDFSNSPIFVGLLCSLSRLTSLSSL 639

Query: 628 ---------KEVPS---SIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
                    +EV +    +  LT L  L+L    + +R+P  I AL  L  L+L  C+ L
Sbjct: 640 KLHGEYSRSREVSTLYYDLGHLTSLTDLDLG-YSDFLRVPICIHALPRLTRLDLCYCYNL 698

Query: 676 ENVPETLGQIESLEELDISG 695
           E +PE      SL EL + G
Sbjct: 699 EVLPELPS---SLRELQVKG 715


>gi|449464636|ref|XP_004150035.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1195

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 333/971 (34%), Positives = 507/971 (52%), Gaps = 125/971 (12%)

Query: 1    MDSRCEKLRFLMDSGSSD--VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE 58
            +DS+ + +  L   G SD  V M+GI GMGG+GKTT+A+ +Y+ I+++FEA  FL NVRE
Sbjct: 202  IDSQLKAIEELASHGVSDNGVNMVGIHGMGGIGKTTLAKALYNKITYQFEACCFLSNVRE 261

Query: 59   ISSK-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
             S +  GLV LQ +LL+++ K  +  + NV  G++++  RL  +KVL+V+DDV    QL 
Sbjct: 262  TSEQFNGLVQLQEKLLNEIFKDNNLKVDNVDKGMNIIKDRLCSRKVLMVLDDVDKDDQLD 321

Query: 118  SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
            +L G R+WFG GS+II+T+RD HLL+T+  D+++    L+ D++L+LF   AFK   P +
Sbjct: 322  ALVGGRDWFGRGSKIIVTTRDRHLLETYSFDKIHPIQLLDCDKSLELFCWHAFKQSHPSR 381

Query: 178  ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
               +L   ++RY  GLPLAL +LGS L  R    W+S L+ L+  P   I  + QISF  
Sbjct: 382  NYSEL-PELVRYCNGLPLALVILGSLLCKRDQIIWKSKLDELKNFPEPGIEAVFQISFKR 440

Query: 238  LQELE--KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMH 295
            L E    K+IFLDI CFF G D  Y  N L+ C  +    I +L++  L+TV +  + MH
Sbjct: 441  LPENPPVKEIFLDICCFFVGEDVSYSKNVLKACDPYLESRIIILMDLSLVTVEDGKIQMH 500

Query: 296  DLLQELGQQIVQRQS--PEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
            DL++++GQ IV+R+S  PE   KRSRLW  +E   +L E +GT  V+ I LD     N  
Sbjct: 501  DLIRQMGQMIVRRKSFKPE---KRSRLWVAKEAVKMLIEKSGTHKVKAIKLD---LRNNG 554

Query: 354  YLCASAKAFSKMTNLRLLKICN-LQLP-NGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
             L   A+AF  M NLRLL + N  +LP N  +YL N    + W    +++  S+++    
Sbjct: 555  SLIVEAEAFRNMENLRLLILQNAAKLPTNIFKYLPN----IKW----IEYSSSSVRWYFP 606

Query: 412  IEIYMCYSRIGELWKGI--KH-------LDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
            I   +    +G +  G+  KH          LK + LS+   L   PDF+ A NLEKL L
Sbjct: 607  ISFVVNGGLVGLVINGVSNKHPGIIFEDCKMLKHVDLSYWRLLEETPDFSAALNLEKLYL 666

Query: 463  EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCL 522
              C RL  IH S+   +KL+ L+++ C +L  LP   LM                 LK L
Sbjct: 667  LSCKRLKMIHGSVASLSKLVTLDLEGCENLEKLPSSFLM-----------------LKSL 709

Query: 523  STLDVSGDLKFREFPEIVEHMEHLSELHL-EGTAIRGLPLSI--ELLSGLVLLNLKNCRS 579
              L++SG +K +E P++     +L ELHL E   +R +  S     L  LV+L+L+ C+ 
Sbjct: 710  EVLNLSGCIKLKEIPDL-SASSNLKELHLRECYHLRIIHDSAVGRFLDKLVILDLEGCKI 768

Query: 580  LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF-LDGT-SIKEVPSSIELL 637
            LE LP +    + L+ L LS C  LK+  +   S+    E+F L G  S++ +  S+  L
Sbjct: 769  LERLPTSHLKFESLKVLNLSYCQNLKEITDF--SIASNLEIFDLRGCFSLRTIHKSVGSL 826

Query: 638  TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA 697
             +L  L L  C  L  LPS  + LKSL +L+L+ C+K+E +PE    ++SL E+++ GTA
Sbjct: 827  DQLIALKLDFCHQLEELPSC-LRLKSLDSLSLTNCYKIEQLPEFDENMKSLREMNLKGTA 885

Query: 698  V---PHSTSW--------YSY------IP-------------------INLMRKSVALKL 721
            +   P S  +         SY      +P                   ++++    +L  
Sbjct: 886  IRKLPTSIRYLIGLENLILSYCTNLISLPSEIHLLKSLKELDLRECSRLDMLPSGSSLNF 945

Query: 722  PSLSGLCSLRKLNLTDCNLMEGALPSDIGNLC-SLKELYLSKNSFVSLPTSITHLSKLLN 780
            P  S   +L  L+L +CN+       ++ N C +LKEL LS N F  LP S+ + + L  
Sbjct: 946  PQRSLCSNLTILDLQNCNISNSDFLENLSNFCTTLKELNLSGNKFCCLP-SLKNFTSLRL 1004

Query: 781  IELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKS 840
            +EL +CK L+++ ++P  ++++  +GC  LV   D                         
Sbjct: 1005 LELRNCKFLRNIVKIPHCLKRMDASGCELLVISPDY------------------------ 1040

Query: 841  LAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYA 900
            +A  M R     + N ++ L  +V  SEIP++   Q   SSI+ +   N  +   +    
Sbjct: 1041 IADMMFRNQDLKLRNFKREL--IVTYSEIPKFCNNQTTESSISFSFQHN--SDMIIPALV 1096

Query: 901  ICCVFHVLKNS 911
            +C VF V  +S
Sbjct: 1097 VCVVFKVDADS 1107


>gi|227438189|gb|ACP30584.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 980

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 317/933 (33%), Positives = 487/933 (52%), Gaps = 79/933 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M +  +K+  L+  GS +VRMIGI G  G+GKTTIARV Y+ +S+ F+ S F+D+++  S
Sbjct: 28  MGAHLKKMEPLLCLGSDEVRMIGIWGPPGIGKTTIARVAYNQLSNSFQLSVFMDDIKANS 87

Query: 61  SK------GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
           S+         + LQ+Q +SQ+    D     V   + +  +RL+ KKVL+V+D V    
Sbjct: 88  SRLCSDDYSVKLQLQQQFMSQITDHKDM----VVSHLGVASNRLKDKKVLVVLDGVDRSI 143

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL ++A    WFG GSRIIIT++D+ LL+ HG++ +Y+      DEALQ+F M +F    
Sbjct: 144 QLDAMAKETWWFGPGSRIIITTQDQKLLRAHGINHIYEVDFPTNDEALQIFCMHSFGQKS 203

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           P     +L+  + + +G LPL L V+GS+  G S  EW + L RL     ++I  IL+ S
Sbjct: 204 PKYGFEELAREVTQLSGELPLGLRVMGSYFRGMSKQEWINVLPRLRTSLYADIRSILKFS 263

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
           +D L + +K +FL IACFF   +   V  +L          + VL E+ LI++    + M
Sbjct: 264 YDALDDEDKYLFLHIACFFSYEEIHKVEVYLAKKFVEVRQRLNVLAERSLISIDWGVIRM 323

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLT-ESTGTELVEGIVLDNYHHENEV 353
           H LL++LG++IV +QS  + G+R  L+   E+C +LT E+TG++ V GI LD Y  E E 
Sbjct: 324 HSLLEKLGREIVCKQSIHDPGQRQFLYDCREICELLTGEATGSKSVIGIKLDYYKIEEE- 382

Query: 354 YLCASAKAFSKMTNLRLLKI----CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMD 409
            L  S KAF  M+NL+ L++      LQL  GL YLS++LRLL W  +P+   P N+ ++
Sbjct: 383 -LDVSEKAFDGMSNLQFLQVNGYGAPLQLTRGLNYLSHKLRLLHWSHFPMSCFPCNVNLE 441

Query: 410 KTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLY 469
             +E+ M  S++ +LW+GIK L  LK M LS S NL  +P+ + A NLEKL L  C  L 
Sbjct: 442 FLVELIMIGSKLEKLWEGIKPLRSLKWMDLSDSVNLKELPNLSTATNLEKLYLRNCWSLI 501

Query: 470 EIHPSLLLHNKLIILNMKDCTSLITLP---GKILMKSLEKLNLKSLPTTISGLKCLSTLD 526
           ++    L  N +  L++  C+SL+  P   G  +  +L KLNL S P  +          
Sbjct: 502 KL--PCLPGNSMEELDIGGCSSLVQFPSFTGNAV--NLLKLNLVSFPNLV---------- 547

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTA-IRGLPLSIELLSGLVLLNLKNCRSLEILPV 585
                   E P  V +  +L  L+L   + +  LPLS   L  L  L LK C  LE  P 
Sbjct: 548 --------ELPSYVGNATNLENLNLSNCSHLVELPLSFGNLQKLQTLILKGCSKLENFPN 599

Query: 586 TVSNLKCLRSLKLSGCSK--LKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLEL 642
            ++ L+ L  L L+GCS   L  F  IV ++ +L  L L     + EVPS I   T LE 
Sbjct: 600 NIT-LEFLNDLDLAGCSSLDLSGFSTIV-NVVNLQTLNLSSLPQLLEVPSFIGNATNLED 657

Query: 643 LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG-TAVPHS 701
           L LS+C NLV LP  I  L+ LK L L GC KLE +P  +  +ESL EL+++  + + H 
Sbjct: 658 LILSNCSNLVELPLFIGNLQKLKRLRLEGCSKLEVLPTNIN-LESLFELNLNDCSMLKHF 716

Query: 702 TSWYSYI-PINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
               +YI  + L+  ++    PS+     L +L ++    ++G  P  +  +     + L
Sbjct: 717 PEISTYIRNLYLIGTAIEQVPPSIRSWSRLDELKMSYFENLKG-FPHALERITC---MCL 772

Query: 761 SKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLC 820
           +      LP  +  +S+L    L+ C++L +LP +  +IR +  + C SL          
Sbjct: 773 TDTEIQELPPWVKKISRLSVFVLKGCRKLVTLPAISESIRYMDASDCKSL---------- 822

Query: 821 KSDSTMIAC-LDSLKLLGNKSLAFSMLREYLE-AVSNTRQHLSVVVPGSEIPEWFMYQNE 878
                ++ C   +  L  N +  F + +E     + N+ ++   V+PG ++P  F ++  
Sbjct: 823 ----EILECSFHNQYLTLNFANCFKLSQEARNLIIQNSCRY--AVLPGGQVPPHFTHRAT 876

Query: 879 GSSITVTRPSNLYNKKKLVGYAI--CCVFHVLK 909
           G+     +     N+K L  Y I   C+  V K
Sbjct: 877 GAGPLTIK----LNEKPLPKYMIFKACILLVYK 905


>gi|336238977|gb|AEI27415.1| TIR_2 [Helianthus annuus]
          Length = 1055

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 271/739 (36%), Positives = 393/739 (53%), Gaps = 90/739 (12%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M++R   L+ +++ GS  VRM+GI G+GG GKTT+A   Y  ISH FEA   L+N+RE S
Sbjct: 254 METRLRDLKLMLEIGSGGVRMVGIWGVGGGGKTTLASAAYMEISHLFEACCLLENIREES 313

Query: 61  SKGGLVSLQRQLLSQLLK---LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
           SK GL  LQ ++LS  LK   + D+ I    +G  M+  RL  K+VL+V+DDV +++QL+
Sbjct: 314 SKHGLKKLQEKILSVALKTTVVVDSEI----EGRSMIKRRLCHKRVLVVLDDVDELEQLE 369

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
           +LAG+ +WFG GSRIIIT+RD+HLL +     +Y+   L+Y EA++LFN  A+   +P++
Sbjct: 370 ALAGSHDWFGEGSRIIITTRDKHLLSSRAHTNIYEVSLLSYYEAIKLFNRHAYYKDKPIE 429

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
           +  +LS R++ YAGGLPLAL+VLGSFL  +  DEW+STL +L+  P  ++++ L+IS+DG
Sbjct: 430 DYEKLSLRVVSYAGGLPLALKVLGSFLYDKDKDEWKSTLAKLKCIPEEKVMERLKISYDG 489

Query: 238 LQELEKKIFLDIACFFKGN---DRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
           L+  +K +FLDIACF + N   + D     L+ C F+PVIG++VL +K LI V      M
Sbjct: 490 LEPYQKDLFLDIACFMRHNYSLEMDEAMMVLDACNFYPVIGLKVLEQKSLIKVSKYGFEM 549

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           HDL++E+   IV+ + P  L K SR+W+ E++ ++         +E  VL ++     +Y
Sbjct: 550 HDLIEEMAHYIVRGEHPNNLEKHSRIWRWEDLRYLCDMGAAAPSMENEVLASF----AMY 605

Query: 355 LCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
             +S    S +       + N++           LR + W  YP    PSN Q  K   +
Sbjct: 606 YRSSHPGLSDV-------VANMK----------NLRWIKWDWYPASSFPSNFQPTKLRCL 648

Query: 415 YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
            +  S    LW+G K L  LK++ L  S++LI  PDF G P LE+LIL GC  L EIHPS
Sbjct: 649 MLRSSWQETLWEGCKSLPNLKILDLRESKSLITTPDFEGLPCLERLILWGCESLEEIHPS 708

Query: 475 LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFR 534
           +  H +L+ +N+  CT+L   P  I MK LE                  TL + G  + +
Sbjct: 709 IGYHKRLVFVNLTSCTALKRFPPIIHMKKLE------------------TLILDGCRRPQ 750

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSI-ELLSGLVLLNLKNCRSLEILPVTVSNLKCL 593
           +FP+I  +M+ L  L L  T I  +P SI    + LV  NL +C  L+ +      LK L
Sbjct: 751 QFPDIQSNMDSLVTLDLSRTGIEIIPPSIGRFCTNLVSFNLSDCPRLKRIEGNFHLLKSL 810

Query: 594 RSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK---- 649
           + L L GC  L+ F               DG    + P     L K   LNLS CK    
Sbjct: 811 KDLNLYGCIGLQSFHH-------------DGYVSLKRPQFPRFLRK---LNLSWCKLGDG 854

Query: 650 --------------------NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLE 689
                               N  RLPS I  L  LK LNL+ C +L  +P+    I  L 
Sbjct: 855 DILSDICELLNLQLLDLSGNNFSRLPSRISQLPCLKYLNLTCCARLAELPDLPSSIALLY 914

Query: 690 ELDISGTAVPHSTSWYSYI 708
                   +    S+Y ++
Sbjct: 915 VDGCDSLEIVRDLSYYKWL 933


>gi|334183770|ref|NP_564971.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196827|gb|AEE34948.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1400

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 309/865 (35%), Positives = 471/865 (54%), Gaps = 81/865 (9%)

Query: 1    MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFL----DN 55
            M +  EK++ L+   S+D  R +GI G  G+GK+TIARV+++ IS  F+ S F+      
Sbjct: 257  MKAHIEKMKQLLCLDSTDERRTVGISGPSGIGKSTIARVLHNQISDGFQMSVFMKFKPSY 316

Query: 56   VREISSKGGLVSLQ--RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDV 113
             R I S    V LQ  +Q L+QL+   D  I  +    + +      KKVL+V+D V  +
Sbjct: 317  TRPICSDDHDVKLQLEQQFLAQLINQEDIKIHQLGTAQNFV----MGKKVLIVLDGVDQL 372

Query: 114  KQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY 173
             QL ++       G GSRIIIT++D+ LLK   +  +Y        EALQ+F + AF   
Sbjct: 373  VQLLAMP-KAVCLGPGSRIIITTQDQQLLKAFQIKHIYNVDFPPDHEALQIFCIHAFGHD 431

Query: 174  QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
             P     +L+ ++ R AG LPL L V+GS   G S ++W+  L RL I    EI  IL+ 
Sbjct: 432  SPDDGFEKLATKVTRLAGNLPLGLRVMGSHFRGMSKEDWKGELPRLRIRLDGEIGSILKF 491

Query: 234  SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVI-GIRVLIEKCLITVHNNTL 292
            S+D L + +K +FL IACFF     D+         F  V  G++VL+++ LI+  + T 
Sbjct: 492  SYDVLDDEDKDLFLHIACFFNDEGIDHTFEDTLRHKFSNVQRGLQVLVQRSLIS-EDLTQ 550

Query: 293  WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
             MH+LL +LG++IV+ QS  E GKR  L   +E+C VLT  TG+E V GI  + Y   +E
Sbjct: 551  PMHNLLVQLGREIVRNQSVYEPGKRQFLVDGKEICEVLTSHTGSESVIGINFEVYWSMDE 610

Query: 353  VYLCASAKAFSKMTNLRLLKI-----CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
            + +  S + F  M+NL+  +        L LP GL YL  +LR+L W  YP+  LPS   
Sbjct: 611  LNI--SDRVFEGMSNLQFFRFDENSYGRLHLPQGLNYLPPKLRILHWDYYPMTSLPSKFN 668

Query: 408  MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
            +   ++I + +S + +LW+GI+ L  LKVM L +S +L  +P+ + A NL +++L  C+ 
Sbjct: 669  LKFLVKIILKHSELEKLWEGIQPLVNLKVMDLRYSSHLKELPNLSTAINLLEMVLSDCSS 728

Query: 468  LYEIHPSLLLHNKLIILNMKDCTSLITLPGKI-LMKSLEKLNLKS------LPTTISGLK 520
            L E+  S+     +  L+++ C+SL+ LP  I  + +L +L+L        LP++I  L 
Sbjct: 729  LIELPSSIGNATNIKSLDIQGCSSLLKLPSSIGNLITLPRLDLMGCSSLVELPSSIGNLI 788

Query: 521  CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLK---- 575
             L  LD+ G     E P  + ++ +L   +  G +++  LP SI  L  L +L LK    
Sbjct: 789  NLPRLDLMGCSSLVELPSSIGNLINLEAFYFHGCSSLLELPSSIGNLISLKILYLKRISS 848

Query: 576  --------------------NCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMK 615
                                 C SL  LP ++ NL  L+ L LSGCS L + P  + ++ 
Sbjct: 849  LVEIPSSIGNLINLKLLNLSGCSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLI 908

Query: 616  DLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
            +L EL+L + +S+ E+PSSI  L  L+ LNLS+C +LV LPSSI  L +L+ L LS C  
Sbjct: 909  NLQELYLSECSSLVELPSSIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSS 968

Query: 675  LENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP-SLSGLCSLRKL 733
            L  +P ++G + +L++LD+SG                    S  ++LP S+  L +L+ L
Sbjct: 969  LVELPSSIGNLINLKKLDLSGC-------------------SSLVELPLSIGNLINLKTL 1009

Query: 734  NLTDC-NLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELEDCKRLQS 791
            NL++C +L+E  LPS IGNL +L+ELYLS+ +S V LP+SI +L  L  ++L  C  L  
Sbjct: 1010 NLSECSSLVE--LPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVE 1067

Query: 792  LPQLPP---NIRQVRVNGCASLVTL 813
            LP       N++ + ++GC+SLV L
Sbjct: 1068 LPLSIGNLINLKTLNLSGCSSLVEL 1092



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 181/532 (34%), Positives = 292/532 (54%), Gaps = 41/532 (7%)

Query: 376  LQLPNGLEYLSN--RLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY--SRIGELWKGIKHL 431
            ++LP+ +  L N  RL L+G     L  LPS++     +E +  +  S + EL   I +L
Sbjct: 778  VELPSSIGNLINLPRLDLMGCSS--LVELPSSIGNLINLEAFYFHGCSSLLELPSSIGNL 835

Query: 432  DKLKVMILSHSENLIRMPDFTGAPNLEKLIL-EGCTRLYEIHPSLLLHNKLIILNMKDCT 490
              LK++ L    +L+ +P   G     KL+   GC+ L E+  S+     L  L++  C+
Sbjct: 836  ISLKILYLKRISSLVEIPSSIGNLINLKLLNLSGCSSLVELPSSIGNLINLKKLDLSGCS 895

Query: 491  SLITLPGKI-LMKSLEKL------NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHM 543
            SL+ LP  I  + +L++L      +L  LP++I  L  L TL++S      E P  + ++
Sbjct: 896  SLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLKTLNLSECSSLVELPSSIGNL 955

Query: 544  EHLSELHL-EGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
             +L EL+L E +++  LP SI  L  L  L+L  C SL  LP+++ NL  L++L LS CS
Sbjct: 956  INLQELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLKTLNLSECS 1015

Query: 603  KLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
             L + P  + ++ +L EL+L + +S+ E+PSSI  L  L+ L+LS C +LV LP SI  L
Sbjct: 1016 SLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNL 1075

Query: 662  KSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA----VPHST-SWYSYIPINLMRKS 716
             +LKTLNLSGC  L  +P ++G + +L++LD+SG +    +P S  +  +   ++L   S
Sbjct: 1076 INLKTLNLSGCSSLVELPSSIGNL-NLKKLDLSGCSSLVELPSSIGNLINLKKLDLSGCS 1134

Query: 717  VALKLP-SLSGLCSLRKLNLTDC-NLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSIT 773
              ++LP S+  L +L++L L++C +L+E  LPS IGNL +L+ELYLS+ +S V LP+SI 
Sbjct: 1135 SLVELPLSIGNLINLQELYLSECSSLVE--LPSSIGNLINLQELYLSECSSLVELPSSIG 1192

Query: 774  HLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSL 833
            +L  L  ++L  C +L SLPQLP ++  +    C SL TL  +    +     I C    
Sbjct: 1193 NLINLKKLDLNKCTKLVSLPQLPDSLSVLVAESCESLETLACSFPNPQVWLKFIDC---- 1248

Query: 834  KLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQ-NEGSSITV 884
                     + +  +  + +  T      ++PG E+P +F Y+   G S+ V
Sbjct: 1249 ---------WKLNEKGRDIIVQTSTSNYTMLPGREVPAFFTYRATTGGSLAV 1291


>gi|357499649|ref|XP_003620113.1| Resistance protein PRG [Medicago truncatula]
 gi|355495128|gb|AES76331.1| Resistance protein PRG [Medicago truncatula]
          Length = 1256

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 262/706 (37%), Positives = 399/706 (56%), Gaps = 45/706 (6%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR  +++ L+D GS+D V ++GI GMGG GKTT+A+ +Y+ I+ +FE   FL NVREI
Sbjct: 201 IESRLLQIKSLLDVGSNDAVCLVGIYGMGGSGKTTLAQAIYNFIADQFECLCFLHNVREI 260

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ +LLS+ + L+     +V +GI ++  RL+ KKVLL++DDV ++KQL+ L
Sbjct: 261 SAKHGLEDLQEKLLSKTVGLS-VKFGHVSEGIPIIKERLRLKKVLLILDDVDELKQLKVL 319

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG+  W G GSR+++T+RD+HLL  HG++  Y+  GLN +EAL+L   KAFK  +     
Sbjct: 320 AGDPNWLGHGSRVVVTTRDKHLLACHGIERTYELDGLNKEEALELLKWKAFKNNKVDSSY 379

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R + YA GLPLALEV+GS L G+  DEW+STL+R E  P  E+L IL++SFD L+
Sbjct: 380 EHILNRAVTYASGLPLALEVVGSSLFGKHKDEWKSTLDRYERIPHKEVLKILKVSFDSLE 439

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFL-----EGCGFHPVIGIRVLIEKCLITVHNNT--- 291
           + E+ +FLDIAC F+G     V + L     E   +H    IRVLIEKCLI ++      
Sbjct: 440 KDEQSVFLDIACCFRGYILAEVEDILYAHYGECMKYH----IRVLIEKCLIKIYRQCGCT 495

Query: 292 -LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHE 350
            + +HDL++E+G++IV+++SP+E GKRSRLW  +++  VL E+ GT  +E I +++   +
Sbjct: 496 YVTLHDLIEEMGKEIVRQESPKEPGKRSRLWFHKDIVQVLEENLGTSKIEIIYMESPLSK 555

Query: 351 NEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK 410
            E  +        KM NL+   I   +   GLE+L N LR+L WR YP +  PS     K
Sbjct: 556 EEEVVEWKGDELKKMENLKTFIIKRGRFSKGLEHLPNNLRVLEWRSYPSQDSPSIFWQKK 615

Query: 411 TIEIYM---CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
                +   C++   EL   IK    ++ +IL H + LIR+ + +G PNLE    + C  
Sbjct: 616 LSICKLRESCFTSF-ELHDSIKKFVNMRELILDHCQCLIRIHNVSGLPNLETFSFQCCKN 674

Query: 468 LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDV 527
           L  +H S+ L NKL ILN K C+ L + P    MK                L  L  L++
Sbjct: 675 LITVHNSVGLLNKLKILNAKRCSKLTSFPP---MK----------------LTSLHELEL 715

Query: 528 SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
           S     + FPEI+  +++++ + L GT I  LP S   LSGL  L +   R++  LP  +
Sbjct: 716 SYCTSLKSFPEILGEIKNVTRILLRGTFIEELPYSFRNLSGLHRLLIWGSRNVR-LPFGI 774

Query: 588 SNLKCLRSLKLSGCSKLKKFPEIV--RSMKDLSELFLDGTSIKEVPSSIELLTKLELLNL 645
             +  L  ++  GC   +K  + +   +M    +      S++ +P  +  +T ++ L L
Sbjct: 775 LMMPNLARIEAYGCLLFQKDNDKLCSTTMSSCVQFLRCKLSVEFLPIVLSQITNVKDLVL 834

Query: 646 SDCKNLVRLPSSIIALKSLKTLNLSGCFKLE---NVPETLGQIESL 688
           S   N   LP  +     L++L L  C  L+    +P  L  + +L
Sbjct: 835 SG-SNFTILPECLKECNFLQSLELDNCKSLQEIRGIPPNLKHVSAL 879



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 125/283 (44%), Gaps = 62/283 (21%)

Query: 630 VPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLE 689
           V +S+ LL KL++LN   C  L   P   + L SL  L LS C  L++ PE LG+I+++ 
Sbjct: 678 VHNSVGLLNKLKILNAKRCSKLTSFPP--MKLTSLHELELSYCTSLKSFPEILGEIKNVT 735

Query: 690 ELDISGTAV---PHSTSWYSYIPINLMRKSVALKLP----------------------SL 724
            + + GT +   P+S    S +   L+  S  ++LP                        
Sbjct: 736 RILLRGTFIEELPYSFRNLSGLHRLLIWGSRNVRLPFGILMMPNLARIEAYGCLLFQKDN 795

Query: 725 SGLCSLRK---LNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNI 781
             LCS      +    C L    LP  +  + ++K+L LS ++F  LP  +   + L ++
Sbjct: 796 DKLCSTTMSSCVQFLRCKLSVEFLPIVLSQITNVKDLVLSGSNFTILPECLKECNFLQSL 855

Query: 782 ELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSL 841
           EL++CK LQ +  +PPN++ V    C SL        LC+                    
Sbjct: 856 ELDNCKSLQEIRGIPPNLKHVSALRCESLTY------LCR-------------------- 889

Query: 842 AFSMLREYLEAVSNTRQHLSVVVPGSE-IPEWFMYQNEGSSIT 883
            + +L + L    +T    +    G+E IPEWF +Q++G SIT
Sbjct: 890 -WKLLNQELHEAGSTDFRWA----GTERIPEWFEHQSKGPSIT 927


>gi|12597786|gb|AAG60098.1|AC073178_9 disease resistance protein, putative [Arabidopsis thaliana]
          Length = 1398

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 309/865 (35%), Positives = 471/865 (54%), Gaps = 81/865 (9%)

Query: 1    MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFL----DN 55
            M +  EK++ L+   S+D  R +GI G  G+GK+TIARV+++ IS  F+ S F+      
Sbjct: 255  MKAHIEKMKQLLCLDSTDERRTVGISGPSGIGKSTIARVLHNQISDGFQMSVFMKFKPSY 314

Query: 56   VREISSKGGLVSLQ--RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDV 113
             R I S    V LQ  +Q L+QL+   D  I  +    + +      KKVL+V+D V  +
Sbjct: 315  TRPICSDDHDVKLQLEQQFLAQLINQEDIKIHQLGTAQNFV----MGKKVLIVLDGVDQL 370

Query: 114  KQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY 173
             QL ++       G GSRIIIT++D+ LLK   +  +Y        EALQ+F + AF   
Sbjct: 371  VQLLAMP-KAVCLGPGSRIIITTQDQQLLKAFQIKHIYNVDFPPDHEALQIFCIHAFGHD 429

Query: 174  QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
             P     +L+ ++ R AG LPL L V+GS   G S ++W+  L RL I    EI  IL+ 
Sbjct: 430  SPDDGFEKLATKVTRLAGNLPLGLRVMGSHFRGMSKEDWKGELPRLRIRLDGEIGSILKF 489

Query: 234  SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVI-GIRVLIEKCLITVHNNTL 292
            S+D L + +K +FL IACFF     D+         F  V  G++VL+++ LI+  + T 
Sbjct: 490  SYDVLDDEDKDLFLHIACFFNDEGIDHTFEDTLRHKFSNVQRGLQVLVQRSLIS-EDLTQ 548

Query: 293  WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
             MH+LL +LG++IV+ QS  E GKR  L   +E+C VLT  TG+E V GI  + Y   +E
Sbjct: 549  PMHNLLVQLGREIVRNQSVYEPGKRQFLVDGKEICEVLTSHTGSESVIGINFEVYWSMDE 608

Query: 353  VYLCASAKAFSKMTNLRLLKI-----CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
            + +  S + F  M+NL+  +        L LP GL YL  +LR+L W  YP+  LPS   
Sbjct: 609  LNI--SDRVFEGMSNLQFFRFDENSYGRLHLPQGLNYLPPKLRILHWDYYPMTSLPSKFN 666

Query: 408  MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
            +   ++I + +S + +LW+GI+ L  LKVM L +S +L  +P+ + A NL +++L  C+ 
Sbjct: 667  LKFLVKIILKHSELEKLWEGIQPLVNLKVMDLRYSSHLKELPNLSTAINLLEMVLSDCSS 726

Query: 468  LYEIHPSLLLHNKLIILNMKDCTSLITLPGKI-LMKSLEKLNLKS------LPTTISGLK 520
            L E+  S+     +  L+++ C+SL+ LP  I  + +L +L+L        LP++I  L 
Sbjct: 727  LIELPSSIGNATNIKSLDIQGCSSLLKLPSSIGNLITLPRLDLMGCSSLVELPSSIGNLI 786

Query: 521  CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLK---- 575
             L  LD+ G     E P  + ++ +L   +  G +++  LP SI  L  L +L LK    
Sbjct: 787  NLPRLDLMGCSSLVELPSSIGNLINLEAFYFHGCSSLLELPSSIGNLISLKILYLKRISS 846

Query: 576  --------------------NCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMK 615
                                 C SL  LP ++ NL  L+ L LSGCS L + P  + ++ 
Sbjct: 847  LVEIPSSIGNLINLKLLNLSGCSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLI 906

Query: 616  DLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
            +L EL+L + +S+ E+PSSI  L  L+ LNLS+C +LV LPSSI  L +L+ L LS C  
Sbjct: 907  NLQELYLSECSSLVELPSSIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSS 966

Query: 675  LENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP-SLSGLCSLRKL 733
            L  +P ++G + +L++LD+SG                    S  ++LP S+  L +L+ L
Sbjct: 967  LVELPSSIGNLINLKKLDLSGC-------------------SSLVELPLSIGNLINLKTL 1007

Query: 734  NLTDC-NLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELEDCKRLQS 791
            NL++C +L+E  LPS IGNL +L+ELYLS+ +S V LP+SI +L  L  ++L  C  L  
Sbjct: 1008 NLSECSSLVE--LPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVE 1065

Query: 792  LPQLPP---NIRQVRVNGCASLVTL 813
            LP       N++ + ++GC+SLV L
Sbjct: 1066 LPLSIGNLINLKTLNLSGCSSLVEL 1090



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 181/532 (34%), Positives = 292/532 (54%), Gaps = 41/532 (7%)

Query: 376  LQLPNGLEYLSN--RLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY--SRIGELWKGIKHL 431
            ++LP+ +  L N  RL L+G     L  LPS++     +E +  +  S + EL   I +L
Sbjct: 776  VELPSSIGNLINLPRLDLMGCSS--LVELPSSIGNLINLEAFYFHGCSSLLELPSSIGNL 833

Query: 432  DKLKVMILSHSENLIRMPDFTGAPNLEKLIL-EGCTRLYEIHPSLLLHNKLIILNMKDCT 490
              LK++ L    +L+ +P   G     KL+   GC+ L E+  S+     L  L++  C+
Sbjct: 834  ISLKILYLKRISSLVEIPSSIGNLINLKLLNLSGCSSLVELPSSIGNLINLKKLDLSGCS 893

Query: 491  SLITLPGKI-LMKSLEKL------NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHM 543
            SL+ LP  I  + +L++L      +L  LP++I  L  L TL++S      E P  + ++
Sbjct: 894  SLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLKTLNLSECSSLVELPSSIGNL 953

Query: 544  EHLSELHL-EGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
             +L EL+L E +++  LP SI  L  L  L+L  C SL  LP+++ NL  L++L LS CS
Sbjct: 954  INLQELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLKTLNLSECS 1013

Query: 603  KLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
             L + P  + ++ +L EL+L + +S+ E+PSSI  L  L+ L+LS C +LV LP SI  L
Sbjct: 1014 SLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNL 1073

Query: 662  KSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA----VPHST-SWYSYIPINLMRKS 716
             +LKTLNLSGC  L  +P ++G + +L++LD+SG +    +P S  +  +   ++L   S
Sbjct: 1074 INLKTLNLSGCSSLVELPSSIGNL-NLKKLDLSGCSSLVELPSSIGNLINLKKLDLSGCS 1132

Query: 717  VALKLP-SLSGLCSLRKLNLTDC-NLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSIT 773
              ++LP S+  L +L++L L++C +L+E  LPS IGNL +L+ELYLS+ +S V LP+SI 
Sbjct: 1133 SLVELPLSIGNLINLQELYLSECSSLVE--LPSSIGNLINLQELYLSECSSLVELPSSIG 1190

Query: 774  HLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSL 833
            +L  L  ++L  C +L SLPQLP ++  +    C SL TL  +    +     I C    
Sbjct: 1191 NLINLKKLDLNKCTKLVSLPQLPDSLSVLVAESCESLETLACSFPNPQVWLKFIDC---- 1246

Query: 834  KLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQ-NEGSSITV 884
                     + +  +  + +  T      ++PG E+P +F Y+   G S+ V
Sbjct: 1247 ---------WKLNEKGRDIIVQTSTSNYTMLPGREVPAFFTYRATTGGSLAV 1289


>gi|357474807|ref|XP_003607689.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508744|gb|AES89886.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1043

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 251/613 (40%), Positives = 359/613 (58%), Gaps = 42/613 (6%)

Query: 1   MDS-RCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           MDS R E  + L+     DV ++GICGMGG+GKTT+  V+YD ISH+F A  F+D+V ++
Sbjct: 202 MDSPRQELEKLLLLDSVDDVHVVGICGMGGIGKTTLGMVLYDRISHQFGACCFIDDVSKM 261

Query: 60  SS-KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
                G + +Q+Q+L Q L    N I N+    +++  RL R++VL++ D+V  V+QL+ 
Sbjct: 262 FRLHDGPLDVQKQILHQTLGENHNQICNLSTASNLIRRRLCRQRVLMIFDNVDKVEQLEK 321

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           +   REW G GS+III SRDEH+LK +GVDEVYK   L++  +LQL   KAFK    L  
Sbjct: 322 IGVCREWLGEGSKIIIISRDEHILKNYGVDEVYKVPLLDWTNSLQLLCRKAFKLDHILNS 381

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
              L   I+ YA GLPLA++VLGSFL GR + EWRS L RL+  P  +++D+L++SFDGL
Sbjct: 382 YEGLVNGILHYANGLPLAIKVLGSFLFGRDISEWRSALARLKESPEKDVMDVLRLSFDGL 441

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDL 297
           +E EK+IFL IACFF      Y+ N L  CGFH  IG+RVLI+K LI++  +  + MH L
Sbjct: 442 KEQEKEIFLHIACFFNQVWGKYLKNVLNCCGFHADIGLRVLIDKSLISIDADGFIHMHGL 501

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHH-ENEVYLC 356
           L+ELG++IVQ  S +E     R+W  ++V  V+ E      VE IVL++ +  E++  + 
Sbjct: 502 LEELGREIVQENSSKEQRNWRRIWFVKQVNDVMLEKMEKN-VEAIVLNHENDGEDDAKMV 560

Query: 357 ASAKAFSKMTNLRLLKI-CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
              +  SKM +LRLL + C +     L   S  LR + W  YP K+LPS+   ++ +E+ 
Sbjct: 561 TIVEHLSKMRHLRLLIVRCPVNTSGNLSCFSKELRYVEWSEYPFKYLPSSFDSNQLVELI 620

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           + YS I +LWKG            SHS+NLI+MP F   PNLE+L LEGC +L ++ PSL
Sbjct: 621 LEYSSIEQLWKG-----------KSHSKNLIKMPHFGEFPNLERLDLEGCIKLVQLDPSL 669

Query: 476 LLHNKLIILNMKDCTSLITL----PGKILMKS---------------LEKLNLKSLPTT- 515
            L  KL+ LN+KDC  +I L    P  + +++               L K +    PTT 
Sbjct: 670 SLLTKLVYLNLKDCKCIIGLLSNNPRPLNIRASHSSSTTPSSLKRNMLPKHSSLQTPTTH 729

Query: 516 ---ISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLL 572
               S L  L  L++S      + P  +  +  L  L+L G     +P S+  LS LV L
Sbjct: 730 TNLFSSLHSLCELNLSF-CNLLQIPNAIGCLYWLEALNLGGNNFVTVP-SLRELSKLVYL 787

Query: 573 NLKNCRSLEILPV 585
           +L++C+ L+ LPV
Sbjct: 788 SLEHCKLLKSLPV 800



 Score = 97.1 bits (240), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 190/437 (43%), Gaps = 95/437 (21%)

Query: 632  SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
            SSIE L K +    S  KNL+++P       +L+ L+L GC KL  +  +L  +  L  L
Sbjct: 624  SSIEQLWKGK----SHSKNLIKMPH-FGEFPNLERLDLEGCIKLVQLDPSLSLLTKLVYL 678

Query: 692  DISG-----------------TAVPHSTSWYSYIPINLMRKSVALKLPS-----LSGLCS 729
            ++                    A   S++  S +  N++ K  +L+ P+      S L S
Sbjct: 679  NLKDCKCIIGLLSNNPRPLNIRASHSSSTTPSSLKRNMLPKHSSLQTPTTHTNLFSSLHS 738

Query: 730  LRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRL 789
            L +LNL+ CNL++  +P+ IG L  L+ L L  N+FV++P S+  LSKL+ + LE CK L
Sbjct: 739  LCELNLSFCNLLQ--IPNAIGCLYWLEALNLGGNNFVTVP-SLRELSKLVYLSLEHCKLL 795

Query: 790  QSLPQLPPNI---RQVRVNGCASLVT-------LLDALKLCKSDSTMIACLDSLKLLGNK 839
            +SLP LP        +  N   +  T       + +  KL +++                
Sbjct: 796  KSLPVLPSPTAIEHDLYKNNLPAFGTRWPIGLFIFNCPKLGETERW-------------S 842

Query: 840  SLAFSMLREYLEA----VSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV-TRPSNLYNKK 894
            S+ FS + ++++A      ++   + +V PGSE+P WF  Q++G+ I + + P    N  
Sbjct: 843  SMTFSWMIQFIQANRQFSHDSSDRVQIVTPGSEMPSWFNNQSKGNLIRIDSSPIMHDNNN 902

Query: 895  KLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQ---------- 944
             +VG   C VF +           S+PT + +        G+ F D  G+          
Sbjct: 903  NIVGCVCCVVFSMTPR--------SHPTMRRSSPSRQTYLGLEFTDTHGRVIEKSNTGIQ 954

Query: 945  ---------AGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKM 995
                     A S+H+WL Y       D+   L   L    S + N          +EVK 
Sbjct: 955  VTLNDRLITAKSNHIWLTYFPLDLSSDL---LNRTLWVDTSRYEN-------DLKIEVKN 1004

Query: 996  CGLHPVYMDEVEELDQT 1012
            CG   VY  +++E + T
Sbjct: 1005 CGYRWVYKQDLQEFNLT 1021


>gi|296086817|emb|CBI32966.3| unnamed protein product [Vitis vinifera]
          Length = 1313

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 300/862 (34%), Positives = 459/862 (53%), Gaps = 74/862 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DSR +++  L+   SSDV ++GI G+GG+GKTTIA+ +Y+ +S EFE   FL+N+R IS
Sbjct: 97  IDSRVKEVSLLLHMESSDVCIVGIYGVGGIGKTTIAKFIYNKLSCEFEYMSFLENIRGIS 156

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFD-GIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           +  GL  LQ QLL  + +   +   N+ D G  M+ + L  K V +V+DDV +  QL++L
Sbjct: 157 NTKGLTHLQNQLLGDIREEERSQNINIVDQGASMIETILSSKSVFIVLDDVDNRNQLKAL 216

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
             +R W G GSR+IIT+R++HLL    VD++Y+  GLN +EA +LF++ AFK   P  + 
Sbjct: 217 LRHRGWLGKGSRVIITTRNKHLLIEQEVDDLYEVKGLNTEEACELFSLHAFKQNLPKSDF 276

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           + LS R++ Y  GLPLALEVLGS L   ++ +W S L +L  EP +EI ++L+ S+DGL 
Sbjct: 277 INLSYRMVYYCQGLPLALEVLGSLLFNMTIPQWESQLHKLAKEPMAEIHNVLKSSYDGLD 336

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLL 298
             EK I LD+ACF KG  RD V   L+ C     IGI+ L +KCLIT+ +N+ + MHDL+
Sbjct: 337 RTEKDILLDVACFLKGEKRDSVLRILDACA---GIGIQNLKDKCLITLPYNHKIDMHDLI 393

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           Q++  +IV+   P+E  K SRLW   ++   LT S G + VE I LD       V+   +
Sbjct: 394 QQMCWEIVRENFPKEPNKWSRLWDSHDIERALTTSEGIKGVETIDLD-LSKLKRVHF--N 450

Query: 359 AKAFSKMTNLRLLKICNL----------------------QLPNGLEYLSNRLRLLGWRG 396
           +  FSKMT+LRLL++ +                       ++ +  +  +++    G   
Sbjct: 451 SNVFSKMTSLRLLRVHSYVNIFLGCYDEMKEEEEVDPYYEKIIDSAKKTASKCSRFG--- 507

Query: 397 YPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPN 456
              KF      M    E Y+    I E    I++      +      NL + P   G   
Sbjct: 508 ---KFSEIQGNMRCPWEPYLKEIAIKEHPTSIENSRSFWDLDPCGHSNLEKFPGIQGNMR 564

Query: 457 LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLP-GKILMKSLEKLNL-----K 510
             +L+    T + E+  S+ L + +  L++  C+     P     MKSL +L+L     K
Sbjct: 565 SLRLLYLSKTAIKELPGSIDLES-VESLDLSYCSKFKKFPENGANMKSLRELDLTHTAIK 623

Query: 511 SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLV 570
            LP  IS  + L TLD+S   KF +FP I  +M +L EL L  TAI+  P SI  L  L 
Sbjct: 624 ELPIGISNWESLRTLDLSKCSKFEKFPAIQGNMRNLKELLLNNTAIKCFPDSIGYLKSLE 683

Query: 571 LLNLKNCRSLEILPVTVSNLKCLRS-----------------------LKLSGCSKLKKF 607
           +LN+ +C   E  P    N+K L+                        L LS CSK +KF
Sbjct: 684 ILNVSDCSKFENFPEKGGNMKNLKQLLLKNTPIKDLPDGIGELESLEILDLSDCSKFEKF 743

Query: 608 PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL 667
           PE   +MK L  L+L  T+IK++P+SI  L  L  L+LS+C    + P     +KSL  L
Sbjct: 744 PEKGGNMKSLGMLYLTNTAIKDLPNSIGSLESLVELDLSNCSKFEKFPEKGGNMKSLGML 803

Query: 668 NLSGCFKLENVPETLGQIESLEELDISGTA----VPH-STSWYSYIPINLMRKSVALKLP 722
            L+    ++++P+++G +ESL ELD+S  +     P    +  S + + LM  ++     
Sbjct: 804 YLTNT-AIKDLPDSIGSLESLVELDLSNCSKFEKFPEKGGNMKSLVVLRLMNTAIKDLPD 862

Query: 723 SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIE 782
           S+  L SL +L+L++C+  E   P   GN+  L  LYL+  +   LP SI  L  L++++
Sbjct: 863 SIGSLESLVELDLSNCSKFE-KFPEKGGNMKRLGVLYLTNTAIKDLPDSIGSLD-LVDLD 920

Query: 783 LEDCKRLQSLPQLPPNIRQVRV 804
           L +C + +  P+L  ++ ++R 
Sbjct: 921 LSNCSQFEKFPELKRSMLELRT 942



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 203/734 (27%), Positives = 329/734 (44%), Gaps = 106/734 (14%)

Query: 365  MTNLRLL---KICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRI 421
            M +LRLL   K    +LP  ++  S     L +     KF  +   M    E+ + ++ I
Sbjct: 563  MRSLRLLYLSKTAIKELPGSIDLESVESLDLSYCSKFKKFPENGANMKSLRELDLTHTAI 622

Query: 422  GELWKGIKHLDKLKVMILSHSENLIRMPDFTG-APNLEKLILEGCTRLYEIHPSLLLHNK 480
             EL  GI + + L+ + LS      + P   G   NL++L+L   T +     S+     
Sbjct: 623  KELPIGISNWESLRTLDLSKCSKFEKFPAIQGNMRNLKELLLNN-TAIKCFPDSIGYLKS 681

Query: 481  LIILNMKDCTSLITLPGKI-LMKSLEKLNLKS-----LPTTISGLKCLSTLDVSGDLKFR 534
            L ILN+ DC+     P K   MK+L++L LK+     LP  I  L+ L  LD+S   KF 
Sbjct: 682  LEILNVSDCSKFENFPEKGGNMKNLKQLLLKNTPIKDLPDGIGELESLEILDLSDCSKFE 741

Query: 535  EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
            +FPE   +M+ L  L+L  TAI+ LP SI  L  LV L+L N                  
Sbjct: 742  KFPEKGGNMKSLGMLYLTNTAIKDLPNSIGSLESLVELDLSN------------------ 783

Query: 595  SLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRL 654
                  CSK +KFPE   +MK L  L+L  T+IK++P SI  L  L  L+LS+C    + 
Sbjct: 784  ------CSKFEKFPEKGGNMKSLGMLYLTNTAIKDLPDSIGSLESLVELDLSNCSKFEKF 837

Query: 655  PSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA----VPHSTSWYSYIPI 710
            P     +KSL  L L     ++++P+++G +ESL ELD+S  +     P        + +
Sbjct: 838  PEKGGNMKSLVVLRLMNT-AIKDLPDSIGSLESLVELDLSNCSKFEKFPEKGGNMKRLGV 896

Query: 711  NLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPT 770
              +  +    LP   G   L  L+L++C+  E   P    ++  L+ L L + +   LP+
Sbjct: 897  LYLTNTAIKDLPDSIGSLDLVDLDLSNCSQFE-KFPELKRSMLELRTLNLRRTAIKELPS 955

Query: 771  SITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR---VNGCASLV------TLLDALKLCK 821
            SI ++S L ++++ +CK L+SLP     +  +    + GC++L        L +  KL  
Sbjct: 956  SIDNVSGLWDLDISECKNLRSLPDDISRLEFLESLILGGCSNLWEGLISNQLRNLGKLNT 1015

Query: 822  SDSTM----------IACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHL-----SVVVP- 865
            S   M          +  +D+      + L+  +   +L  + +  + L     S V+P 
Sbjct: 1016 SQWKMAEKTLELPSSLERIDAHHCTSKEDLSSLLWLCHLNWLKSATEELKCWKLSAVIPE 1075

Query: 866  GSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS---RGNNCFGSYPT 922
             S IPEW  Y N GS +T   P+N Y    L+G+ + CV+  +  S   R +  F S  +
Sbjct: 1076 SSGIPEWIRYDNLGSELTTELPTNWYEDPDLLGFVVSCVYQPIPTSHDPRISYHFSSAFS 1135

Query: 923  HQLNCHIGHGIYGIGFRD--KFG---------QAGSDHLWLLYLSRQTCYDIRLPLESNL 971
             +LN H      G GF+D  +FG             D +W+ +  +       +P E   
Sbjct: 1136 CELNLHGN----GFGFKDERRFGCRCECQGNFNDMIDQVWVWWYPKTA-----IPKE--- 1183

Query: 972  EPFESNHVNVSFEP--WLGQGLEVKMCGLHPVYMDEVEE----LDQTTN--------QPS 1017
                S H+N SF+   +    + VK CG++ ++  + +     L+   N        Q +
Sbjct: 1184 HLHNSTHINASFKSNTYYCDAVNVKKCGINLIFAGDQQNHMPMLEHPQNSGDNGSALQDT 1243

Query: 1018 RFTVYNLNEFDQHF 1031
               V+  N+ D+H+
Sbjct: 1244 NGNVHGANQDDEHY 1257


>gi|297741888|emb|CBI33323.3| unnamed protein product [Vitis vinifera]
          Length = 1186

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 260/660 (39%), Positives = 380/660 (57%), Gaps = 72/660 (10%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EKL+ LM++  + V ++GI G+GG+GKTTIA+ +Y+ ISH+++ S FL N++E  SKG +
Sbjct: 40  EKLKSLMNTELNMVSVVGIYGIGGVGKTTIAKAIYNEISHQYDGSSFLINIKE-RSKGDI 98

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
           + LQ++LL  +L+  +  I NV +GI M+   L   +VL++ DDV ++KQL+ LA  ++W
Sbjct: 99  LQLQQELLHGILRGKNFKINNVDEGISMIKRCLSSNRVLVIFDDVDELKQLEYLAEEKDW 158

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSAR 185
           F + S IIITSRD+H+L  +G D  Y+   LN +EA++LF++ AFK  +P +    LS  
Sbjct: 159 FRAKSTIIITSRDKHVLAQYGADIRYEVSKLNKEEAIELFSLWAFKQNRPQEVYKNLSYN 218

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           II YA GLPLAL+VLG+ L G+ +  W S L +L+I P  EI ++L+ISFDGL +++K I
Sbjct: 219 IIDYANGLPLALKVLGASLFGKKISNWESALCKLKIMPHMEIHNVLRISFDGLDDIDKGI 278

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQI 305
           FLD+ACFFKG+DRD+V+  L   G H    I  L ++CLITV  N L MHDL+Q++G +I
Sbjct: 279 FLDVACFFKGDDRDFVSRIL---GPHAKHAITTLDDRCLITVSKNMLDMHDLIQQMGWEI 335

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDN-YHHENEVYLCASAKAFSK 364
           ++++ PE+ G+RSRL  +    HVLT + GT  +EG+ LD    + +E+    + ++F +
Sbjct: 336 IRQECPEDPGRRSRLC-DSNAYHVLTGNKGTRAIEGLFLDRCKFNPSEL----TTESFKE 390

Query: 365 MTNLRLLKICNLQ--------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
           M  LRLLKI N +        LP   E+ S  L  L W GYPL+ LP N      +E+ +
Sbjct: 391 MNRLRLLKIHNPRRKLFLKDHLPRDFEFYSYELAYLHWDGYPLESLPMNFHAKNLVELSL 450

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             S I ++W+G       KV++L  S N      F+  PNLE L LEGC           
Sbjct: 451 RDSNIKQVWRGN------KVLLLLFSYN------FSSVPNLEILTLEGC----------- 487

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
                                         +NL+ LP  I   K L TL  +G  K   F
Sbjct: 488 ------------------------------VNLELLPRGIYKWKHLQTLSCNGCSKLERF 517

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
           PEI   M  L  L L GTAI  LP SI  L+GL  L L+ C  L  +P  + +L  L+ L
Sbjct: 518 PEIKGDMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKEL 577

Query: 597 KLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
            L  C+ ++   P  +  +  L +L L+      +P++I  L++LE+LNLS C NL ++P
Sbjct: 578 DLGHCNIMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTINQLSRLEVLNLSHCNNLEQIP 637



 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/263 (41%), Positives = 151/263 (57%), Gaps = 21/263 (7%)

Query: 551  LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI 610
             +G+ +  +P+ IE    L  L L++CR+L  LP ++   K L +L  SGCS+L+ FPEI
Sbjct: 918  FKGSDMNEVPI-IENPLELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEI 976

Query: 611  VRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLS 670
            ++ M+ L +L+L+GT+IKE+PSSI+ L  L+ L L +CKNLV LP SI  L S KTL +S
Sbjct: 977  LQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVS 1036

Query: 671  GCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSL 730
             C     +P+ LG+++SLE L +                      S+  +LPSLSGLCSL
Sbjct: 1037 RCPNFNKLPDNLGRLQSLEYLFVGHL------------------DSMNFQLPSLSGLCSL 1078

Query: 731  RKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQ 790
            R L L  CNL E   PS+I  L SL  L L  N F  +P  I+ L  L N+ L  CK LQ
Sbjct: 1079 RTLKLQGCNLRE--FPSEIYYLSSLVTLSLGGNHFSRIPDGISQLYNLENLYLGHCKMLQ 1136

Query: 791  SLPQLPPNIRQVRVNGCASLVTL 813
             +P+LP  +  +  + C SL  L
Sbjct: 1137 HIPELPSGLFCLDAHHCTSLENL 1159



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 161/308 (52%), Gaps = 30/308 (9%)

Query: 615 KDLSELFLDGTSIKEVPSSIELL-----------TKLELLNLSDCKNLVRLPSSIIALKS 663
           K+L EL L  ++IK+V    ++L             LE+L L  C NL  LP  I   K 
Sbjct: 443 KNLVELSLRDSNIKQVWRGNKVLLLLFSYNFSSVPNLEILTLEGCVNLELLPRGIYKWKH 502

Query: 664 LKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYIPINLMRKSVAL- 719
           L+TL+ +GC KLE  PE  G +  L  LD+SGTA+   P S +  + +   L+++ + L 
Sbjct: 503 LQTLSCNGCSKLERFPEIKGDMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLH 562

Query: 720 KLPS-LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
           ++P+ +  L SL++L+L  CN+MEG +PSDI +L SL++L L +  F S+PT+I  LS+L
Sbjct: 563 QIPNHICHLSSLKELDLGHCNIMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTINQLSRL 622

Query: 779 LNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGN 838
             + L  C  L+ +P+LP  +R +  +G     +    L L     +++ C    + L  
Sbjct: 623 EVLNLSHCNNLEQIPELPSRLRLLDAHGSNRTSSRALFLPL----HSLVNCFSWAQGLKR 678

Query: 839 KSLAFSMLREYLEAVSNTRQHLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLV 897
            S + S  R          +   +V+P ++ IPEW M + +        P N +   + +
Sbjct: 679 TSFSDSSYRG---------KGTCIVLPRTDGIPEWIMDRTKRYFTETELPQNWHQNNEFL 729

Query: 898 GYAICCVF 905
           G+A+CCV+
Sbjct: 730 GFALCCVY 737



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 108/187 (57%), Gaps = 7/187 (3%)

Query: 508  NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
            NL SLP++I G K L+TL  SG  +   FPEI++ ME L +L+L GTAI+ +P SI+ L 
Sbjct: 945  NLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLR 1004

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF---LDG 624
            GL  L L+NC++L  LP ++ NL   ++L +S C    K P+ +  ++ L  LF   LD 
Sbjct: 1005 GLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEYLFVGHLDS 1064

Query: 625  TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQ 684
             +  ++P S+  L  L  L L  C NL   PS I  L SL TL+L G      +P+ + Q
Sbjct: 1065 MNF-QLP-SLSGLCSLRTLKLQGC-NLREFPSEIYYLSSLVTLSLGG-NHFSRIPDGISQ 1120

Query: 685  IESLEEL 691
            + +LE L
Sbjct: 1121 LYNLENL 1127



 Score = 48.1 bits (113), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 20/197 (10%)

Query: 399  LKFLPSNLQ-MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPN 456
            L+  P  LQ M+   ++Y+  + I E+   I+ L  L+ ++L + +NL+ +P+      +
Sbjct: 970  LESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTS 1029

Query: 457  LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
             + L++  C             NKL   N+    SL  L     +  L+ +N + LP ++
Sbjct: 1030 FKTLVVSRCPNF----------NKLPD-NLGRLQSLEYL----FVGHLDSMNFQ-LP-SL 1072

Query: 517  SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
            SGL  L TL + G    REFP  + ++  L  L L G     +P  I  L  L  L L +
Sbjct: 1073 SGLCSLRTLKLQG-CNLREFPSEIYYLSSLVTLSLGGNHFSRIPDGISQLYNLENLYLGH 1131

Query: 577  CRSLEILPVTVSNLKCL 593
            C+ L+ +P   S L CL
Sbjct: 1132 CKMLQHIPELPSGLFCL 1148


>gi|42569093|ref|NP_179297.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|330251486|gb|AEC06580.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1355

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 314/992 (31%), Positives = 494/992 (49%), Gaps = 136/992 (13%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
           +R IGI GM G+GKTT+A   +D  S ++EAS  + +  +     GL  L          
Sbjct: 46  IRSIGIWGMPGIGKTTLAEAAFDQFSGDYEASCIIKDFDKEFLAKGLYHL---------- 95

Query: 79  LADNSIWNVFDGIDMLGSRLQ--RKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITS 136
                 WN + G ++  S ++  +K++L+V+D+V+      +     +WFG GS IIITS
Sbjct: 96  ------WNEYLGENINNSFIKSGQKRLLIVLDNVLKPLDADAFLNGFDWFGPGSLIIITS 149

Query: 137 RDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARI---IRYAGGL 193
           RD+ +L   GV+++Y+  GLN DEA QL +  AF      Q  ++  A     ++Y  G 
Sbjct: 150 RDKQVLVQCGVNQIYEVEGLNKDEAKQLLHGCAFGIDWRKQSGLETLAPYYISVKYFSGN 209

Query: 194 PLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFF 253
           PLAL +    LS    D+    L +L   PP +I+++ + +++ L E EK +FLDIACFF
Sbjct: 210 PLALSLYEEMLSHMKSDKMEVKLLKLN-HPPPQIMEVFKSNYNALNENEKSMFLDIACFF 268

Query: 254 KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEE 313
           +G   DYV    EGCGF P +GI VL++KCL+T+    + MH+L+Q +G+ I   +   E
Sbjct: 269 RGEKADYVMQLFEGCGFFPHVGIYVLVDKCLVTIVKRKMEMHNLIQIVGKAI-SNEGTVE 327

Query: 314 LGKRSRLWK--------EEEVCHVLTESTG-TELVEGIVLDNYHHENEVYLCASAKAFSK 364
           L +  RLW         E+E   +  ES G TE +E I LD     + +       AF  
Sbjct: 328 LDRHVRLWDTSIIQPLLEDEETKLKGESKGTTEDIEVIFLD----MSNLKFFVKPDAFKS 383

Query: 365 MTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
           M NLR LKI +        ++    L+ L N LRLL W  YPL+ LP +      +E+ M
Sbjct: 384 MHNLRFLKIYSSNPGKHQRIRFREALQSLPNELRLLHWEDYPLQSLPQHFDPTHLVELNM 443

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
            YS++ +LW G K+L+ LK++ LSHS++L+ + +   + N+E + L+GCT++ +  P+  
Sbjct: 444 PYSKLQKLWGGTKNLEMLKMVRLSHSQDLVEIEELIKSKNIEVIDLQGCTKI-QSFPATR 502

Query: 477 LHNKLIILNMKDC-------------------------TSLITLPGKILMKSLEKLN--- 508
               L ++N+  C                         T +  +   I + SLE L+   
Sbjct: 503 HLQHLRVINLSGCVEIKSTQLEEFQGFPRNLKELYLSGTGIREVTSSIHLSSLEVLDLSN 562

Query: 509 ---LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIEL 565
              L++LP     L  L  L +SG  K +   ++     +L EL+L GT+IR +P SI  
Sbjct: 563 CKRLQNLPMGKGNLASLIKLMLSGCSKLQNIQDLP---TNLKELYLAGTSIREVPSSICH 619

Query: 566 LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT 625
           L+ LV+ + +NC+ L+ LP+ + NL  L  L LSGCS+L+  P++ R+++ L+   L  T
Sbjct: 620 LTQLVVFDAENCKKLQDLPMGMGNLISLTMLILSGCSELRSIPDLPRNLRHLN---LAET 676

Query: 626 SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV-PETLGQ 684
            IK++PSS E LTKL  L+L+ C+ L  L   + + +S+  ++LSGC +L+ +   +L  
Sbjct: 677 PIKKLPSSFEDLTKLVSLDLNHCERLQHL--QMESFESVVRVDLSGCLELKYILGFSLQD 734

Query: 685 IESLEELDISGTAVPHST----------SWYS--YIPINLMRKSVALKL------PSLSG 726
           I  L E D +   + H T          +W +    P+        LKL      P  S 
Sbjct: 735 ITQLHE-DGTDKVMLHGTPPCNVTLILETWRTRHVTPMEKSGSKFYLKLMPFVTTPYRSK 793

Query: 727 LCS--------LRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
           L S        +  L L+   L++  +P +I NL SLK L LS N+F  LP SI     L
Sbjct: 794 LQSSLVFRMYAMVSLFLSKAYLLDIHIPQEICNLLSLKTLDLSGNNFGKLPESIKQFRNL 853

Query: 779 LNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGN 838
            ++ L  CK L+SLP+LP ++  +  +GC  L  +  + +      T   C +       
Sbjct: 854 ESLILCHCKNLESLPELPQSLEFLNAHGCVCLKNIHRSFQQFPRHCTFSNCFE------- 906

Query: 839 KSLAFSMLREYLEA------VSNTRQHL------SVVVPGSEIPEWFMYQNEGSSITVTR 886
             ++  ++RE LEA      + +T Q L      S  VP    P +  + N GSS+ +  
Sbjct: 907 --ISPDIVREILEARVAQMVIDHTLQKLIEAPAFSFSVPAFRDPNYIFHLNRGSSVMIRL 964

Query: 887 PSNLYNKKKLVGYAICCVFHVLKNSRGNNCFG 918
             ++   + L+G+ I        +S  N  FG
Sbjct: 965 TPSI---ETLLGFQISVAVAFWNDSYSNAGFG 993


>gi|15234388|ref|NP_192938.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|4586106|emb|CAB40942.1| putative disease resistance protein (TMV N-like) [Arabidopsis
           thaliana]
 gi|7267902|emb|CAB78244.1| putative disease resistance protein (TMV N-like) [Arabidopsis
           thaliana]
 gi|332657683|gb|AEE83083.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1219

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 279/748 (37%), Positives = 411/748 (54%), Gaps = 84/748 (11%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR + L  L+     D V +IGI GM G+GKTT+A  +Y  +  +F+ S FL N+RE 
Sbjct: 190 IESRLKNLEKLLSWEDLDTVHIIGIVGMVGIGKTTLADCLYGRMRGQFDGSCFLTNIREN 249

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S + GL SL ++L S +L   D  I    +  +    RL+ K++L+V+DDV D KQ++ L
Sbjct: 250 SGRSGLESLLQKLFSTVLNDRDLEIGAPGNAHERFERRLKSKRLLIVLDDVNDEKQIRYL 309

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G+ +W+  GSRIIIT+RD  L++T    +   P  LN  EAL+LF++ AF    PL+E 
Sbjct: 310 MGHCKWYQGGSRIIITTRDSKLIETIKGRKYVLPK-LNDREALKLFSLNAFSNSFPLKEF 368

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             L+  ++ YA G PLAL+VLGS L  R    W + L+RL+     +I ++L+ S++ L 
Sbjct: 369 EGLTNMVLDYAKGHPLALKVLGSDLCERDDLYWEAKLDRLKSRSHGDIYEVLETSYEELT 428

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
             +K +FLDIACFF+  + DYVT+ L   G      ++ L++KCLIT+ +N + MHD+LQ
Sbjct: 429 TEQKNVFLDIACFFRSENVDYVTSLLNSHGVDVSGVVKDLVDKCLITLSDNRIEMHDMLQ 488

Query: 300 ELGQQIVQRQSPEELGKRS---------------RLWKEEEVCHVLTESTGTELVEGIVL 344
            + ++I  +   E +G R                RLW  E++C +LTE  GT+ + GI L
Sbjct: 489 TMAKEISLK--VETIGIRDCRWLSRHGNQCQWHIRLWDSEDICDLLTEGLGTDKIRGIFL 546

Query: 345 DNYHHENEVYLCASAKAFSKMTNLRLLKICN------------LQLPNGLEYLSNRLRLL 392
           D         +  SAKAF  M NL+ LKI +            L L  GL +L N L  L
Sbjct: 547 DTSKLR---AMRLSAKAFQGMYNLKYLKIYDSHCSRGCEAEFKLHLRRGLSFLPNELTYL 603

Query: 393 GWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFT 452
            W GYPL+ +P +      +++ + +S++ E+W   K +  LK + LSHS NL +     
Sbjct: 604 HWHGYPLQSIPLDFDPKNLVDLKLPHSQLEEIWDDEKDVGMLKWVDLSHSINLRQCLGLA 663

Query: 453 GAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSL 512
            A NLE+L LEGCT L ++  ++    KLI LN++DCTSL +LP  I  +SL+       
Sbjct: 664 NAHNLERLNLEGCTSLKKLPSTINCLEKLIYLNLRDCTSLRSLPKGIKTQSLQ------- 716

Query: 513 PTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLL 572
                      TL +SG    ++FP I E++E    L L+GT I+ LP SI+    L LL
Sbjct: 717 -----------TLILSGCSSLKKFPLISENVE---VLLLDGTVIKSLPESIQTFRRLALL 762

Query: 573 NLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPS 632
           NLKNC+ L+ L   +  LKCL+ L LSGCS+L+ FPEI   M+ L  L +D TSI E+P 
Sbjct: 763 NLKNCKKLKHLSSDLYKLKCLQELILSGCSQLEVFPEIKEDMESLEILLMDDTSITEMPK 822

Query: 633 SIEL---------------------------LTKLELLNLSDCKNLVRLPSSIIALKSLK 665
            + L                            ++L  L LS C +L +LP +I  L SL+
Sbjct: 823 MMHLSNIKTFSLCGTSSHVSVSMFFMPPTLGCSRLTDLYLSRC-SLYKLPDNIGGLSSLQ 881

Query: 666 TLNLSGCFKLENVPETLGQIESLEELDI 693
           +L LSG   +EN+PE+  Q+ +L+  D+
Sbjct: 882 SLCLSG-NNIENLPESFNQLNNLKWFDL 908



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 138/407 (33%), Positives = 211/407 (51%), Gaps = 32/407 (7%)

Query: 522  LSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSL 580
            L  +D+S  +  R+   +  +  +L  L+LEG T+++ LP +I  L  L+ LNL++C SL
Sbjct: 645  LKWVDLSHSINLRQCLGLA-NAHNLERLNLEGCTSLKKLPSTINCLEKLIYLNLRDCTSL 703

Query: 581  EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
              LP  +   + L++L LSGCS LKKFP I    +++  L LDGT IK +P SI+   +L
Sbjct: 704  RSLPKGIKT-QSLQTLILSGCSSLKKFPLIS---ENVEVLLLDGTVIKSLPESIQTFRRL 759

Query: 641  ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL---DISGTA 697
             LLNL +CK L  L S +  LK L+ L LSGC +LE  PE    +ESLE L   D S T 
Sbjct: 760  ALLNLKNCKKLKHLSSDLYKLKCLQELILSGCSQLEVFPEIKEDMESLEILLMDDTSITE 819

Query: 698  VPHSTSWYSYIPINLMRKSVALK-----LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNL 752
            +P      +    +L   S  +      +P   G   L  L L+ C+L +  LP +IG L
Sbjct: 820  MPKMMHLSNIKTFSLCGTSSHVSVSMFFMPPTLGCSRLTDLYLSRCSLYK--LPDNIGGL 877

Query: 753  CSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVT 812
             SL+ L LS N+  +LP S   L+ L   +L+ CK L+SLP LP N++ +  + C SL T
Sbjct: 878  SSLQSLCLSGNNIENLPESFNQLNNLKWFDLKFCKMLKSLPVLPQNLQYLDAHECESLET 937

Query: 813  L---LDALKLCKSDSTMIACLDSLKLLGNKS---LAFSMLREYLEAVSNTRQH------- 859
            L   L  L + +   +M    +  KL  +     +  + ++  L A ++ +++       
Sbjct: 938  LANPLTPLTVGERIHSMFIFSNCYKLNQDAQASLVGHARIKSQLMANASAKRYYRGFVPE 997

Query: 860  --LSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCV 904
              + +  P +EIP WF +Q  G S+ +  P + +     VG A+  V
Sbjct: 998  PLVGICYPATEIPSWFCHQRLGRSLEIPLPPH-WCDINFVGLALSVV 1043


>gi|356524164|ref|XP_003530702.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1248

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 271/742 (36%), Positives = 412/742 (55%), Gaps = 64/742 (8%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR +++  L+D GS+  V M+GI G+GG+GKT IA  VY+LI+ +FE   FL ++RE 
Sbjct: 196 LESRVQEVNSLLDVGSNQGVSMVGIYGIGGIGKTAIACAVYNLIADQFEGQCFLGDIRE- 254

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            SK GLV LQ  +LS+++      + +   G  +L S+LQRKKVLL++DDV  ++QL++L
Sbjct: 255 KSKHGLVELQETILSEMVGEKSIKLGSTNRGKAVLKSKLQRKKVLLILDDVDRLEQLKAL 314

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG+  WFG GSRII+T+ D+HLL+ HGV+  Y+  GL+  EAL+LF+  AFK+ +     
Sbjct: 315 AGDPSWFGHGSRIIVTTTDKHLLRVHGVERRYEAKGLDDKEALELFSWHAFKSNEVSPSY 374

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           + +S R + Y+ GLPLALE++GS L+G+++ EW++ L+ +E  P  +I + L++ +DGL+
Sbjct: 375 MDISKRAVLYSNGLPLALEIIGSNLNGKTMPEWQAALDTIERNPDEDIQEKLKVGYDGLK 434

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFL-EGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDL 297
             EK++FLDIACFF+G+D   VT+ L +G GF P   IRVLI+K LI +     + MH+L
Sbjct: 435 RNEKEVFLDIACFFRGSDLKDVTSLLFQGRGFSPEYVIRVLIDKSLIKIDKYGFVRMHNL 494

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           ++ +G++IV+++SP E GKRSRLW  E++  VL    GT+ +E I+L   H      +  
Sbjct: 495 VENMGREIVKQESPSEPGKRSRLWLYEDIVDVLENDKGTDTIEVIML---HSPKNKEVQW 551

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
           +     KMTNL+LL I N     G  +L N LR+L W GYP   LP      + + + + 
Sbjct: 552 NGSELKKMTNLKLLSIENAHFSRGPVHLPNSLRVLKWWGYPSPSLPPEFDSRRLVMLDLS 611

Query: 418 YS--RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
            S   +G+  K +K  + L  M+L     + + PD +GA NL+KL L+ C  L E+H S+
Sbjct: 612 NSCNIMGKQLKFMK-FESLSEMVLRGCRFIKQTPDMSGAQNLKKLCLDNCKNLVEVHDSI 670

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
            L +K+       CT+L  LP    + SLE L+ K      S L+CL             
Sbjct: 671 GLLDKITWFTAVGCTNLRILPRSFKLTSLEHLSFKK----CSNLQCL------------- 713

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
            P I+E M+H+ +L L GTAI  LP S   L+GL  L L  C+ L  +P+++  L  L  
Sbjct: 714 -PNILEEMKHVKKLDLCGTAIEELPFSFRKLTGLKYLVLDKCKMLNQIPISILMLPKLEK 772

Query: 596 LKLSGCSK-----LKKFPEIVR--------------------SMKDLSELFLDGTSIKEV 630
           L    C +     L K    VR                    S  ++  L L G++ K +
Sbjct: 773 LTAIKCGRYANLILGKSEGQVRLSSSESLRDVRLNYNDLAPASFPNVEFLVLTGSAFKVL 832

Query: 631 PSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEE 690
           P  I     L+ L L +CK L  +      +K L  +N   C  L +  +++   + L E
Sbjct: 833 PQCISQCRFLKNLVLDNCKELQEIRGVPPKIKYLSAIN---CTSLSHESQSMLLNQRLHE 889

Query: 691 -----LDISGTAVPHSTSWYSY 707
                  + GT +P    W+ +
Sbjct: 890 GGGTDFSLPGTRIPE---WFDH 908



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 129/318 (40%), Gaps = 74/318 (23%)

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
           SI LL  +       C +L ILP +   L  L  L    CS L+  P I+  MK + +L 
Sbjct: 669 SIGLLDKITWFTAVGCTNLRILPRSF-KLTSLEHLSFKKCSNLQCLPNILEEMKHVKKLD 727

Query: 622 LDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPET 681
           L GT+I+E+P S   LT L+ L L  CK L ++P SI+ L  L+ L    C +  N+   
Sbjct: 728 LCGTAIEELPFSFRKLTGLKYLVLDKCKMLNQIPISILMLPKLEKLTAIKCGRYANL--I 785

Query: 682 LGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLM 741
           LG+ E    L  S                                  SLR + L   +L 
Sbjct: 786 LGKSEGQVRLSSSE---------------------------------SLRDVRLNYNDLA 812

Query: 742 EGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQ 801
             + P+       ++ L L+ ++F  LP  I+    L N+ L++CK LQ +  +PP I+ 
Sbjct: 813 PASFPN-------VEFLVLTGSAFKVLPQCISQCRFLKNLVLDNCKELQEIRGVPPKIKY 865

Query: 802 VRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLS 861
           +    C SL          +S S ++    + +L       FS+                
Sbjct: 866 LSAINCTSLSH--------ESQSMLL----NQRLHEGGGTDFSL---------------- 897

Query: 862 VVVPGSEIPEWFMYQNEG 879
              PG+ IPEWF +   G
Sbjct: 898 ---PGTRIPEWFDHCTTG 912


>gi|342365842|gb|AEL30375.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 932

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 250/606 (41%), Positives = 365/606 (60%), Gaps = 54/606 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DSR E++   +  G +DVR IGI GMGG+                         VRE  
Sbjct: 197 IDSRVEQVICQIGLGLNDVRYIGIWGMGGI-------------------------VRERC 231

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            K  +  +Q+QLL Q+  ++  ++++ +DG  +L + L+ KKVLLV+DDV   KQL++LA
Sbjct: 232 EKKDIPDIQKQLLDQM-GISSTALYSEYDGRAILQNSLRLKKVLLVLDDVNHEKQLENLA 290

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G ++WFGSGSRIIIT+RD+HLL+  GV E Y+  GL   EA  LF  KAFK  +P +  +
Sbjct: 291 GEQDWFGSGSRIIITTRDQHLLQEQGVHETYEVEGLVEIEAFNLFCSKAFKLPEPTEGFL 350

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            L+  ++ Y+GGLPLAL+VLGS+L  RS++ W S + +++    S+I+D+L+IS+DGL  
Sbjct: 351 DLTKEVVNYSGGLPLALKVLGSYLYCRSIEVWHSAIGKIKNSSHSDIIDVLKISYDGLDS 410

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-----NTLWMH 295
           +EK IFLDI+CFFKG  RDY T  L+ CG H  IGI +LI + L+T+       +TL MH
Sbjct: 411 MEKNIFLDISCFFKGRSRDYATKILKLCGHHAEIGIDILINRSLVTIEQDKYGEDTLKMH 470

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DL++E+G+ IV ++SP++  KRSRLW E+++  VL ++  T+    IVL  Y   +E+Y 
Sbjct: 471 DLIEEMGKLIVNQESPDDASKRSRLWCEDDIDLVLRQNKETKATRSIVL--YDKRDELYW 528

Query: 356 CASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
             +  AFS +  L+LL +  ++ P  L  +   LR+L W G P++ LP   +  + +EI 
Sbjct: 529 --NDLAFSNICQLKLLILDGVKSPI-LCNIPCTLRVLHWNGCPMETLPFTDEHYELVEID 585

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           +  S+I  +W G K L+KLK + LS+S NL + PD +GAPNLE L L  C+ L +IH SL
Sbjct: 586 LYLSKIVHVWHGKKFLEKLKYLNLSNSHNLKQTPDLSGAPNLETLDLSCCSELNDIHQSL 645

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
           + H  L+ LN+  C SL TL  K+ M SL++L+L          +C S          R+
Sbjct: 646 IHHKNLLELNLIKCGSLQTLGDKLEMSSLKELDL---------YECNS---------LRK 687

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
            P+  E M+ LS L L  T I  LP ++  L GL  L+L+ C+ L  LP T+S LK L +
Sbjct: 688 LPKFGECMKRLSILTLSCTGITELPTTVGNLVGLSELDLQGCKRLTCLPDTISGLKSLTA 747

Query: 596 LKLSGC 601
           L +S C
Sbjct: 748 LDVSDC 753



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 146/327 (44%), Gaps = 42/327 (12%)

Query: 589 NLKC-LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
           N+ C LR L  +GC  ++  P       +L E+ L  + I  V    + L KL+ LNLS+
Sbjct: 554 NIPCTLRVLHWNGCP-METLP-FTDEHYELVEIDLYLSKIVHVWHGKKFLEKLKYLNLSN 611

Query: 648 CKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSY 707
             NL + P  +    +L+TL+LS C +L ++ ++L   ++L EL                
Sbjct: 612 SHNLKQTPD-LSGAPNLETLDLSCCSELNDIHQSLIHHKNLLEL---------------- 654

Query: 708 IPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS 767
              NL++      L     + SL++L+L +CN +   LP     +  L  L LS      
Sbjct: 655 ---NLIKCGSLQTLGDKLEMSSLKELDLYECNSLR-KLPKFGECMKRLSILTLSCTGITE 710

Query: 768 LPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL--LDALKLCKSDST 825
           LPT++ +L  L  ++L+ CKRL  LP          ++G  SL  L   D   L      
Sbjct: 711 LPTTVGNLVGLSELDLQGCKRLTCLPD--------TISGLKSLTALDVSDCPNLLLQSLD 762

Query: 826 MIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVT 885
            ++ L SL L  NK +          A  +    + ++V G EIP WF+++ EG+ IT T
Sbjct: 763 SLSTLTSLLLSWNKCVEACCAFA-ASASQDGDDVMQMLVAGEEIPSWFVHREEGNGITAT 821

Query: 886 RPSNLYNKKKLVGYAICCVFHVLKNSR 912
            P       + +  AIC  F +   SR
Sbjct: 822 FPHT-----ETIALAIC--FRLRSTSR 841



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 120/273 (43%), Gaps = 49/273 (17%)

Query: 409 DKTIEIY---MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
           DK  E+Y   + +S I +L   I  LD +K  IL +    +R+  + G P          
Sbjct: 521 DKRDELYWNDLAFSNICQLKLLI--LDGVKSPILCNIPCTLRVLHWNGCP---------- 568

Query: 466 TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNL------KSLPTTISGL 519
               E  P    H +L+ +++     +    GK  ++ L+ LNL      K  P  +SG 
Sbjct: 569 ---METLPFTDEHYELVEIDLYLSKIVHVWHGKKFLEKLKYLNLSNSHNLKQTPD-LSGA 624

Query: 520 KCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRS 579
             L TLD+S   +  +  + + H ++L EL                       NL  C S
Sbjct: 625 PNLETLDLSCCSELNDIHQSLIHHKNLLEL-----------------------NLIKCGS 661

Query: 580 LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTK 639
           L+ L   +  +  L+ L L  C+ L+K P+    MK LS L L  T I E+P+++  L  
Sbjct: 662 LQTLGDKLE-MSSLKELDLYECNSLRKLPKFGECMKRLSILTLSCTGITELPTTVGNLVG 720

Query: 640 LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC 672
           L  L+L  CK L  LP +I  LKSL  L++S C
Sbjct: 721 LSELDLQGCKRLTCLPDTISGLKSLTALDVSDC 753


>gi|359493485|ref|XP_003634611.1| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 824

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 328/921 (35%), Positives = 455/921 (49%), Gaps = 207/921 (22%)

Query: 169  AFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEIL 228
            AF+   P ++  QL    + Y G LPLAL+VLGS L  +S+ EW+S L++L   P  E+L
Sbjct: 2    AFRYKHPTEDFKQLCHHTVDYTGSLPLALKVLGSCLYRKSIHEWKSELDKLNQFPNKEVL 61

Query: 229  DILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH 288
            ++L+ SFDGL + EK +FLDIA F+KG D+D+V   LE   F P   I  L++K LIT+ 
Sbjct: 62   NVLKTSFDGLDDNEKNMFLDIAFFYKGEDKDFVIKVLE--NFFPASEIGNLVDKSLITIS 119

Query: 289  NNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYH 348
            +N L+MHDLLQE+G +IV+++S ++ GKRSRL   E++  VLT + GTE VEG+V D   
Sbjct: 120  DNKLYMHDLLQEMGWEIVRQESIKDPGKRSRLQVHEDIHDVLTTNKGTEAVEGMVFD-LS 178

Query: 349  HENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYL----------------------- 385
               E+ L  S  AF+KM  LRLL+  N Q     EYL                       
Sbjct: 179  ASKELNL--SVDAFAKMNKLRLLRFYNFQFYGRSEYLSKKELIASTHDAWRWMGYDNSPY 236

Query: 386  --------------SNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHL 431
                          SN LR L W GYPLK LPSN   +K +E+ MCYS + +LW+G K  
Sbjct: 237  NDSKLHLSIDFKFPSNNLRSLHWHGYPLKSLPSNFHPEKLVELNMCYSLLKQLWEGKKAF 296

Query: 432  DKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTS 491
             KLK + LSHS++L + PDF+ AP L ++IL GCT L ++HPS+    +LI  N++ C+ 
Sbjct: 297  KKLKFIKLSHSQHLTKTPDFSAAPKLRRIILNGCTSLVKLHPSIGALKELIFPNLEGCSK 356

Query: 492  LITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVE-HMEHLSELH 550
            L                                          +FPE+V+ ++E+LS + 
Sbjct: 357  L-----------------------------------------EKFPEVVQGNLENLSRIS 375

Query: 551  LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI 610
             EGTAIR LP SI  L+ LVLLNL+NC  L  LP ++  L  L++L LSGCSKLKK P+ 
Sbjct: 376  FEGTAIRELPSSIGSLNRLVLLNLRNCEKLASLPQSICELISLQTLTLSGCSKLKKLPDD 435

Query: 611  VRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK-------NLVRLPSSIIA--- 660
            +  ++ L+EL +DGT IKEV SSI LLT LE L+L+ CK       NL+   SS  A   
Sbjct: 436  LGRLQCLAELNVDGTGIKEVTSSINLLTNLEALSLAGCKGGGSKSRNLISFRSSPAAPLQ 495

Query: 661  ------LKSLKTLNLSGCFKLEN-VPETLGQIESLEELDISGTAVPHSTSWYSYIPINLM 713
                  L SLK+LNLS C  LE  +P  L  + SLE L                     +
Sbjct: 496  LPFLSGLYSLKSLNLSDCNLLEGALPTDLSSLSSLENL--------------------YL 535

Query: 714  RKSVALKLP-SLSGLCSLRKLNLTDCNLMEG--ALPSDIGNLCSLKELYLSKNSFVSLPT 770
             K+  + LP SLS L  L++L L  C  +     LPS I         YL+ +S  SL T
Sbjct: 536  DKNSFITLPASLSRLSRLKRLTLEHCKSLRSLPELPSSIE--------YLNAHSCASLET 587

Query: 771  ----SITHLSKL--LNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDS 824
                S T+ SKL  L     +C RL                G   + T+L+  +L  S +
Sbjct: 588  LSCSSSTYTSKLGDLRFNFTNCFRLG------------ENQGSDIVETILEGTQLASSMA 635

Query: 825  TMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQH-LSVVVPGSEIPEWFMYQNEGSSIT 883
             ++   D   LL                     QH    +V GS IP+WF +++EGS + 
Sbjct: 636  KLLEP-DERSLL---------------------QHGYQALVQGSRIPKWFTHRSEGSKVI 673

Query: 884  VTRPSNLYNKKKLVGYAICCVFHVLKNSRG--NNCFGSYPTHQLNCHIGHGIYGIGFRDK 941
               P + YN  KL+G A C VF    N +G  +   G++P   L C +      +   + 
Sbjct: 674  AELPPHWYN-TKLMGLAACVVF----NFKGAVDGYLGTFP---LACFLDGHYATLSDHNS 725

Query: 942  FGQAG---SDHLWLLYLSRQTCYDIRLPLESNLEPFE---SNHVNVSFEPWLGQGL---- 991
               +    SDH W  Y+SR         LE+   P+    S+++  SF   + +G     
Sbjct: 726  LWTSSIIESDHTWFAYISRAE-------LEAPYPPWFGELSDYMLASFLFLVPEGAVTSD 778

Query: 992  -------EVKMCGLHPVYMDE 1005
                   EVK CG+  VY ++
Sbjct: 779  DEVTSHGEVKKCGVRIVYEED 799


>gi|359493570|ref|XP_002270429.2| PREDICTED: uncharacterized protein LOC100253289 [Vitis vinifera]
          Length = 2663

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 261/683 (38%), Positives = 394/683 (57%), Gaps = 39/683 (5%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD R E+L  L++ G +DVRM+G+ G+GG+GKTTI   +Y+ IS++FE+   L +VR+ S
Sbjct: 200 MDYRLERLISLLEIGLNDVRMVGVYGLGGIGKTTIINALYNRISNQFESVSLLTDVRKES 259

Query: 61  SK--GGLVSLQRQLLSQLLKLADNSIW-NVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
           ++  GGL+ LQ+QLL+ +L      +  NV +GI  +  +L  K+VL+ +DDV ++ QL+
Sbjct: 260 TENSGGLLKLQQQLLNDILGTTRKIVLRNVHEGIKEIRDKLSSKRVLVFLDDVDELTQLE 319

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
            L G   WFG GSRIIIT+R + LL  H + ++Y+   LN+ EALQLF + AFK +   +
Sbjct: 320 HLIGKHNWFGPGSRIIITTRKKDLLTRHEM-KMYEVEKLNFHEALQLFCLYAFKQHHLKE 378

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
               LS +++RYA GLPLAL+VLGS L G+ + +W+S L +L   P  EI+ +L+ISFDG
Sbjct: 379 GYGDLSHQVVRYADGLPLALKVLGSLLFGKRLSDWKSELRKLGKVPNMEIVKVLKISFDG 438

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHD 296
           L   +K IFLDIACFF+G D + V+  L+G G     GI VL+++C IT+  +NT+ MHD
Sbjct: 439 LDYTQKMIFLDIACFFQGGDVEAVSRILDGSGCEAESGINVLVDRCFITILEDNTIDMHD 498

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL ++G+ IV  + P E G+RSRLW+  ++  VL  +TGTE +EGI    +H +    + 
Sbjct: 499 LLAQMGKGIVDEECPNEPGERSRLWRHTDIYRVLKRNTGTEKIEGIF---FHMDTSEQIQ 555

Query: 357 ASAKAFSKMTNLRLLKI---CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
            + KAF +M  LRLL +   C  QLP    + S+ L  LGW GY L+ LP N   +  + 
Sbjct: 556 FTCKAFKRMNRLRLLILSHNCIEQLPEDFVFPSDDLTCLGWDGYSLESLPPNFHPNDLVF 615

Query: 414 IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
           + +  S I  LWKG   L  L+ + L+ S+ LI +P+F+  PNLE+L L GC  L ++H 
Sbjct: 616 LGLSNSNIKRLWKGNMCLRNLRYINLNDSQQLIELPNFSNVPNLEELNLSGCIILLKVHT 675

Query: 474 SLLLHNKLIILNMKDCTSLITLP------GKILMKSLEKLNLKSLPTTISGLKCLSTLDV 527
            + +           C+ L + P      GK+   SL+   +K LP++I  L+ L  L +
Sbjct: 676 HIRVFG---------CSQLTSFPKIKRSIGKLERLSLDNTAIKELPSSIELLEGLRNLYL 726

Query: 528 SGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLK--NCR------ 578
                    P  + ++  L  L LEG + +  LP  +E +  L +L+L   +C+      
Sbjct: 727 DNCKNLEGLPNSICNLRFLEVLSLEGCSKLDRLPEDLERMPCLEVLSLNSLSCQLPSLSE 786

Query: 579 ---SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIE 635
              +L  + V +S L  LR+L LS C K+ + PE+  S++ L      GTS+  + S + 
Sbjct: 787 EGGTLSDMLVGISQLSNLRALDLSHCKKVSQIPELPSSLRLLDMHSSIGTSLPPMHSLVN 846

Query: 636 LL-TKLELLNLSDCKNLVRLPSS 657
            L +  E L      N+V L  S
Sbjct: 847 CLKSASEDLKYKSSSNVVFLSDS 869



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 157/493 (31%), Positives = 249/493 (50%), Gaps = 55/493 (11%)

Query: 538  EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
            E   ++EH  +L L+G  I   P  IE  S    L L+ C++LE LP ++   K L+SL 
Sbjct: 1623 ECQRNVEH-RKLCLKGQTISLPP--IECASEFDTLCLRECKNLESLPTSIWEFKSLKSLF 1679

Query: 598  LSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSS 657
             S CS+L+ FPEI+ +M++L +L L+GT+IKE+PSSIE L +L++LNL  CKNLV LP S
Sbjct: 1680 CSDCSQLQYFPEILENMENLRQLHLNGTAIKELPSSIEHLNRLQVLNLERCKNLVTLPES 1739

Query: 658  IIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG----------TAVPHSTSWYSY 707
            I  L+ L+ LN++ C KL  +P+ LG+++SL+ L   G           +   S      
Sbjct: 1740 ICNLRFLEDLNVNYCSKLHKLPQNLGRLQSLKCLRARGLNSRCCQLLSLSGLCSLKELDL 1799

Query: 708  IPINLMRKSVALKLPSLSGLCSLRKLNLTD---CNLMEGALPSDIGNLCSLKELYLSKNS 764
            I   LM+  V      LS +C L  L + D   C + EG +P++I  L SL+EL+L  N 
Sbjct: 1800 IYSKLMQGVV------LSDICCLYSLEVVDLRVCGIDEGGIPTEICQLSSLQELFLFGNL 1853

Query: 765  FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDS 824
            F S+P  I  LS+L  + L +C+ L+ +P LP ++R + ++ C  L T    L      S
Sbjct: 1854 FRSIPAGINQLSRLRLLVLGNCQELRQIPALPSSLRVLDIHLCKRLETSSGLLW-----S 1908

Query: 825  TMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
            ++  C  S  L+ +       L +    V+       ++     IP+W  +  +G+ +  
Sbjct: 1909 SLFNCFKS--LIQDLECKIYPLEKPFARVN------LIISESCGIPDWISHHKKGAEVVA 1960

Query: 885  TRPSNLYNKKKLVGYAICCVFHVLKNSRGNNC--FGSYPTHQLNCHIGHGIYGIGFRDKF 942
              P N Y    L+G+ + CV++ L N          +Y  + L    GH I    F DK 
Sbjct: 1961 KLPQNWYKNDDLLGFVLYCVYYPLDNESEETLENGATYFEYGLTLR-GHEIQ---FVDKL 2016

Query: 943  GQAGSDH------LWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWL-GQGLEVKM 995
                S H      +W++Y  +   ++I     SN    +   +  SF  +L G+ ++V+ 
Sbjct: 2017 QFYPSFHVYVVPCMWMIYYPK---HEIEEKYHSN----KWRQLTASFCGYLRGKAVKVEE 2069

Query: 996  CGLHPVYMDEVEE 1008
            CG+H +Y  + E+
Sbjct: 2070 CGIHLIYAHDHEQ 2082



 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 164/546 (30%), Positives = 244/546 (44%), Gaps = 126/546 (23%)

Query: 563  IELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL 622
            IE  S    L L+ C++LE LP  +   K L+SL  S CS+L+ FPEI+ +M++L +L L
Sbjct: 1087 IERASEFDTLCLRECKNLESLPTIIWEFKSLKSLFCSDCSQLQYFPEILETMENLRQLHL 1146

Query: 623  DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
            +GT+IKE+PSSIE L +L++LNL  CKNLV LP SI  L+ L+ LN++ C KL  +P+ L
Sbjct: 1147 NGTAIKELPSSIERLNRLQVLNLGRCKNLVTLPESICNLRFLEDLNVNFCSKLHKLPQNL 1206

Query: 683  GQIESLEELDISG----------TAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRK 732
            G+++SL+ L   G           +   S      I   LM+  V   L  +  L S+  
Sbjct: 1207 GRLQSLKRLRARGLNSRCCQLLSLSGLCSLKELDLIYSKLMQGVV---LSDICCLYSVEV 1263

Query: 733  LNLTDCNLMEGALPSD------------IGNL---------------------------- 752
            L+L+ C + EG +P++            IGNL                            
Sbjct: 1264 LDLSFCGIDEGGIPTEICQLSSLQELLLIGNLFRSIPAGINQLSRLRLLVLSNCQELRQI 1323

Query: 753  ----CSLKELYLSKNS-FVSLPTSIT--HLSKLLNIELEDCKRLQSLPQLPPNIRQVRVN 805
                  L+ L L+  S  VSLP +I    LSKL  +EL  C+ L  +P+LPP++R + V+
Sbjct: 1324 PVLPSRLQHLNLADCSNLVSLPEAICIIQLSKLRVLELSHCQGLLQVPELPPSLRVLDVH 1383

Query: 806  GCASLVTLLDALKLCKSDSTMIACLDS-LKLLGNKSLAFSMLREYLEAVSNTRQHLSVVV 864
             C  L  L  +   C    ++  C  S ++ L  KS +  +     + + N    + +VV
Sbjct: 1384 SCTCLEVL--SSPSCLLGVSLFKCFKSTIEDLKYKSSSNEVFLRDSDFIGNG---VCIVV 1438

Query: 865  PGS-EIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF---------------HVL 908
            PGS  IP+W   Q EG+ IT+  P N Y     +G AICCV+               H  
Sbjct: 1439 PGSCGIPKWIRNQREGNHITMDLPQNCYENNDFLGIAICCVYAPHDECEDIPENDFAHTS 1498

Query: 909  KNSRGNNCFGSYP---------THQLNCHIG-HGIYG--------IGFRDK----FGQAG 946
            +N  G+     Y          +  L C +  H  YG        + FR          G
Sbjct: 1499 ENESGDEALNEYDDLLEAESSISTGLECKLSLHDRYGFSTLCAQRLSFRTTCKCYHDGGG 1558

Query: 947  SDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLG-------QGLEVKMCGLH 999
            S+ +W+++  +                 ES H N S   +LG          +V  CGL 
Sbjct: 1559 SEQMWVIFYPKAAI-------------LESCHTNPSM--FLGAIFMGCRNHFKVLKCGLE 1603

Query: 1000 PVYMDE 1005
            P+Y  +
Sbjct: 1604 PIYAQD 1609



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 145/528 (27%), Positives = 215/528 (40%), Gaps = 149/528 (28%)

Query: 542  HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
            H   L  L L  + I+ L      L  L  +NL + + L  LP   SN+  L  L LSGC
Sbjct: 609  HPNDLVFLGLSNSNIKRLWKGNMCLRNLRYINLNDSQQLIELP-NFSNVPNLEELNLSGC 667

Query: 602  ---------------SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLS 646
                           S+L  FP+I RS+  L  L LD T+IKE+PSSIELL  L  L L 
Sbjct: 668  IILLKVHTHIRVFGCSQLTSFPKIKRSIGKLERLSLDNTAIKELPSSIELLEGLRNLYLD 727

Query: 647  DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYS 706
            +CKNL  LP+SI  L+ L+ L+L GC KL+ +PE L ++  LE L ++            
Sbjct: 728  NCKNLEGLPNSICNLRFLEVLSLEGCSKLDRLPEDLERMPCLEVLSLN------------ 775

Query: 707  YIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFV 766
                     S++ +LPSLS                EG   SD                  
Sbjct: 776  ---------SLSCQLPSLSE---------------EGGTLSD------------------ 793

Query: 767  SLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTM 826
             +   I+ LS L  ++L  CK++  +P+LP ++R + ++  +S+ T L  +       ++
Sbjct: 794  -MLVGISQLSNLRALDLSHCKKVSQIPELPSSLRLLDMH--SSIGTSLPPMH------SL 844

Query: 827  IACLDS----LKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGS-EIPEWFMYQNEGSS 881
            + CL S    LK   + ++ F      L         + +VVPGS  IP W   Q + + 
Sbjct: 845  VNCLKSASEDLKYKSSSNVVF------LSDSYFIGHGICIVVPGSCGIPNWIRNQRKENR 898

Query: 882  ITVTRPSNLYNKKKLVGYAICCVF---------------HVLKNSRGNNCFGSYP----- 921
            IT+  P N Y     +G AICCV+               H  +N   +     Y      
Sbjct: 899  ITMDLPRNCYENNDFLGIAICCVYAPLDECEDIPENDFAHKSENESDDEALNEYDDFLEA 958

Query: 922  ----THQLNCHIG-HGIYG--------IGFRDK----FGQAGSDHLWLLYLSRQTCYDIR 964
                + +L C +  H  YG        + FR          GS+ +W+++  +       
Sbjct: 959  ESSISTELECQLSLHDRYGFSTLCVQHLSFRTTCKCYHDGGGSEQMWVIFYPKAAI---- 1014

Query: 965  LPLESNLEPFESNHVNVSFEPWLG-------QGLEVKMCGLHPVYMDE 1005
                      ES H N S   +LG          +V  CGL P+Y  +
Sbjct: 1015 ---------LESCHTNPSI--FLGAIFMGCRNHFKVLKCGLEPIYAQD 1051



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/134 (47%), Positives = 87/134 (64%), Gaps = 3/134 (2%)

Query: 538  EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
            E   ++EH  +L L+G  I  LP  IE  S    L L+ C++LE LP ++   K L+SL 
Sbjct: 2521 ECQRNVEH-RKLCLKGQTINLLP--IEHASEFDTLCLRECKNLESLPTSIREFKSLKSLF 2577

Query: 598  LSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSS 657
             S CS+L+ FPEI+ +M++L EL L+GT+IKE+PSSIE L +LELLNL  C+NLV LP S
Sbjct: 2578 GSDCSQLQYFPEILENMENLRELHLNGTAIKELPSSIEHLNRLELLNLDRCQNLVTLPGS 2637

Query: 658  IIALKSLKTLNLSG 671
               L  L+ LN+  
Sbjct: 2638 TCNLCFLEVLNVCA 2651



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 135/245 (55%), Gaps = 11/245 (4%)

Query: 508  NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
            NL+SLPT+I   K L +L  S   + + FPEI+E+ME+L +LHL GTAI+ LP SIE L+
Sbjct: 1661 NLESLPTSIWEFKSLKSLFCSDCSQLQYFPEILENMENLRQLHLNGTAIKELPSSIEHLN 1720

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPE---IVRSMKDLSELFLDG 624
             L +LNL+ C++L  LP ++ NL+ L  L ++ CSKL K P+    ++S+K L    L+ 
Sbjct: 1721 RLQVLNLERCKNLVTLPESICNLRFLEDLNVNYCSKLHKLPQNLGRLQSLKCLRARGLNS 1780

Query: 625  TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE-NVPETLG 683
               + +  S     K   L  S     V L S I  L SL+ ++L  C   E  +P  + 
Sbjct: 1781 RCCQLLSLSGLCSLKELDLIYSKLMQGVVL-SDICCLYSLEVVDLRVCGIDEGGIPTEIC 1839

Query: 684  QIESLEELDISGT---AVPHSTSWYSYIPINLMRKSVALK-LPSLSGLCSLRKLNLTDCN 739
            Q+ SL+EL + G    ++P   +  S + + ++     L+ +P+L    SLR L++  C 
Sbjct: 1840 QLSSLQELFLFGNLFRSIPAGINQLSRLRLLVLGNCQELRQIPALPS--SLRVLDIHLCK 1897

Query: 740  LMEGA 744
             +E +
Sbjct: 1898 RLETS 1902



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/96 (48%), Positives = 61/96 (63%)

Query: 508  NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
            NL+SLPT+I   K L +L  S   + + FPEI+E+ME+L ELHL GTAI+ LP SIE L+
Sbjct: 2559 NLESLPTSIREFKSLKSLFGSDCSQLQYFPEILENMENLRELHLNGTAIKELPSSIEHLN 2618

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
             L LLNL  C++L  LP +  NL  L  L +    K
Sbjct: 2619 RLELLNLDRCQNLVTLPGSTCNLCFLEVLNVCAPDK 2654



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 68/122 (55%), Gaps = 7/122 (5%)

Query: 619  ELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
            +L L G +I  +P  IE  ++ + L L +CKNL  LP+SI   KSLK+L  S C +L+  
Sbjct: 2530 KLCLKGQTINLLP--IEHASEFDTLCLRECKNLESLPTSIREFKSLKSLFGSDCSQLQYF 2587

Query: 679  PETLGQIESLEELDISGTAVPHSTSWYSYIP----INLMRKSVALKLP-SLSGLCSLRKL 733
            PE L  +E+L EL ++GTA+    S   ++     +NL R    + LP S   LC L  L
Sbjct: 2588 PEILENMENLRELHLNGTAIKELPSSIEHLNRLELLNLDRCQNLVTLPGSTCNLCFLEVL 2647

Query: 734  NL 735
            N+
Sbjct: 2648 NV 2649



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 16/219 (7%)

Query: 399  LKFLPSNLQ-MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPN 456
            L++ P  L+ M+   ++++  + I EL   I+HL++L+V+ L   +NL+ +P+       
Sbjct: 1686 LQYFPEILENMENLRQLHLNGTAIKELPSSIEHLNRLQVLNLERCKNLVTLPESICNLRF 1745

Query: 457  LEKLILEGCTRLYEIHPSLLLHNKLIILNMKD----CTSLITLPGKILMKSLEKLNLKSL 512
            LE L +  C++L+++  +L     L  L  +     C  L++L G   +K L+ +  K +
Sbjct: 1746 LEDLNVNYCSKLHKLPQNLGRLQSLKCLRARGLNSRCCQLLSLSGLCSLKELDLIYSKLM 1805

Query: 513  PTTI-SGLKCLSTLDVSGDLKF-----REFPEIVEHMEHLSELHLEGTAIRGLPLSIELL 566
               + S + CL +L+V  DL+         P  +  +  L EL L G   R +P  I  L
Sbjct: 1806 QGVVLSDICCLYSLEVV-DLRVCGIDEGGIPTEICQLSSLQELFLFGNLFRSIPAGINQL 1864

Query: 567  SGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
            S L LL L NC+ L  +P   S+   LR L +  C +L+
Sbjct: 1865 SRLRLLVLGNCQELRQIPALPSS---LRVLDIHLCKRLE 1900



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 123/267 (46%), Gaps = 19/267 (7%)

Query: 428  IKHLDKLKVMILSHSENLIRMPD-FTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNM 486
            I     LK +  S    L   P+      NL +L L G T + E+  S+   N+L +LN+
Sbjct: 1111 IWEFKSLKSLFCSDCSQLQYFPEILETMENLRQLHLNG-TAIKELPSSIERLNRLQVLNL 1169

Query: 487  KDCTSLITLPGKIL-MKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
              C +L+TLP  I  ++ LE LN      L  LP  +  L+ L  L   G          
Sbjct: 1170 GRCKNLVTLPESICNLRFLEDLNVNFCSKLHKLPQNLGRLQSLKRLRARGLNSRCCQLLS 1229

Query: 540  VEHMEHLSELHL-EGTAIRGLPLS-IELLSGLVLLNLKNCRSLE-ILPVTVSNLKCLRSL 596
            +  +  L EL L     ++G+ LS I  L  + +L+L  C   E  +P  +  L  L+ L
Sbjct: 1230 LSGLCSLKELDLIYSKLMQGVVLSDICCLYSVEVLDLSFCGIDEGGIPTEICQLSSLQEL 1289

Query: 597  KLSGCSKLKKFPE-IVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
             L G +  +  P  I +  +    +  +   ++++P    L ++L+ LNL+DC NLV LP
Sbjct: 1290 LLIG-NLFRSIPAGINQLSRLRLLVLSNCQELRQIPV---LPSRLQHLNLADCSNLVSLP 1345

Query: 656  SS--IIALKSLKTLNLSGCFKLENVPE 680
             +  II L  L+ L LS C  L  VPE
Sbjct: 1346 EAICIIQLSKLRVLELSHCQGLLQVPE 1372



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 136/290 (46%), Gaps = 40/290 (13%)

Query: 399  LKFLPSNLQ-MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPN 456
            L++ P  L+ M+   ++++  + I EL   I+ L++L+V+ L   +NL+ +P+       
Sbjct: 1128 LQYFPEILETMENLRQLHLNGTAIKELPSSIERLNRLQVLNLGRCKNLVTLPESICNLRF 1187

Query: 457  LEKLILEGCTRLYEIHPSLLLHNKLIILNMKD----CTSLITLPGKILMKSLEKLNLKSL 512
            LE L +  C++L+++  +L     L  L  +     C  L++L G   +K L+ +  K +
Sbjct: 1188 LEDLNVNFCSKLHKLPQNLGRLQSLKRLRARGLNSRCCQLLSLSGLCSLKELDLIYSKLM 1247

Query: 513  PTTI-SGLKCLSTLDVSGDLKF-----REFPEIVEHMEHLSELHLEGTAIRGLPLSIELL 566
               + S + CL +++V  DL F        P  +  +  L EL L G   R +P  I  L
Sbjct: 1248 QGVVLSDICCLYSVEVL-DLSFCGIDEGGIPTEICQLSSLQELLLIGNLFRSIPAGINQL 1306

Query: 567  SGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS 626
            S L LL L NC+ L  +PV  S L+    L L+ CS L   PE +               
Sbjct: 1307 SRLRLLVLSNCQELRQIPVLPSRLQ---HLNLADCSNLVSLPEAI--------------- 1348

Query: 627  IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
                   I  L+KL +L LS C+ L+++P       SL+ L++  C  LE
Sbjct: 1349 ------CIIQLSKLRVLELSHCQGLLQVPE---LPPSLRVLDVHSCTCLE 1389



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 860  LSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVL 908
            + +VVPGS  IP+W   Q EG  IT+  P + Y     +G AICCV+  L
Sbjct: 2331 ICIVVPGSSGIPKWIRKQREGYQITMDLPQSCYENNDFLGIAICCVYAPL 2380



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 84/220 (38%), Gaps = 20/220 (9%)

Query: 844  SMLREYLEAVSNTRQHLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
            +M+    E  S   + + VV+ G++ IPEW     +GS IT+   ++LY K   +G+A+ 
Sbjct: 2087 AMISTEFECGSYWNKAIRVVISGNDGIPEWISQPKKGSQITIELSTDLYRKDGFLGFALY 2146

Query: 903  CVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTC-- 960
             VF  +     N            CH+                 S    +   S Q C  
Sbjct: 2147 SVFIPMACGWLNCELNICGDQSECCHV-------------DDVRSYCCRICGESSQMCVT 2193

Query: 961  YDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDEV--EELDQTTNQPSR 1018
            Y  ++ + +     E   +  SF    G  +EVK CG H +Y  +V    + + T+  +R
Sbjct: 2194 YYPKVVIGNQYWSNEWRRLKASFHSLDGTPVEVKECGFHLIYTPDVINRNIPEDTSSDAR 2253

Query: 1019 FTVYNLNEFDQHFVGSKMIVATTSKRSLTEYFGAEASGSG 1058
             +  N     +      MI     +RS      AE + S 
Sbjct: 2254 RSCDNTEATRRDH--QTMIEYNDEQRSCDTRSAAEDTNSN 2291



 Score = 41.2 bits (95), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 13/97 (13%)

Query: 729  SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKR 788
            SL+ L  +DC+ ++   P  + N+ +L+EL+L+  +   LP+SI HL++L  + L+ C+ 
Sbjct: 2572 SLKSLFGSDCSQLQ-YFPEILENMENLRELHLNGTAIKELPSSIEHLNRLELLNLDRCQN 2630

Query: 789  LQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDST 825
            L +LP            G    +  L+ L +C  D  
Sbjct: 2631 LVTLP------------GSTCNLCFLEVLNVCAPDKA 2655


>gi|357449987|ref|XP_003595270.1| Heat shock protein [Medicago truncatula]
 gi|355484318|gb|AES65521.1| Heat shock protein [Medicago truncatula]
          Length = 1819

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 253/673 (37%), Positives = 384/673 (57%), Gaps = 51/673 (7%)

Query: 8   LRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYD-LISHEFEASGFLDNVREISSKGGLV 66
           LR   D G++   M+GI G GG+GK+T+AR VY+  IS +F+   FLD++RE +   GLV
Sbjct: 205 LRIGSDEGAN---MVGIYGTGGVGKSTLARAVYNNQISDQFDGVCFLDDIRENAINHGLV 261

Query: 67  SLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWF 126
            LQ  LLS++L   D  + NV  GI ++  RLQRKKVLLV+DDV   KQ+Q LAG   WF
Sbjct: 262 QLQETLLSEILCEKDIRVGNVSRGISIIKRRLQRKKVLLVLDDVDKAKQIQVLAGGHYWF 321

Query: 127 GSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQ-LSAR 185
           GSGS+IIIT+RD+HLL  H +  +Y+   LN++++L+LFN  AF+  + +  C   +S R
Sbjct: 322 GSGSKIIITTRDKHLLAIHEILNLYEVKQLNHEKSLELFNWHAFRN-RKMDPCYNDISNR 380

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
            + YA GLPLALEV+GS L G+ +D W+S L++ E     +I ++L++S+D L + +K I
Sbjct: 381 AVSYAHGLPLALEVIGSHLFGKRLDVWKSALDKYERILHEDIHEVLKVSYDDLDKDDKGI 440

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQ 304
           FLDIACF+   +  Y    L   GF    GI+VL +K LI +  N  + MHDL+Q++G++
Sbjct: 441 FLDIACFYNSYEMGYAKEMLYVHGFSAENGIQVLTDKSLIKIDGNGCVRMHDLVQDMGRE 500

Query: 305 IVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSK 364
           IV+++S  E GKRSRLW ++++ HVL E+TGT+ VE I++D Y   N+  +  S  AF  
Sbjct: 501 IVRQESTLEPGKRSRLWSDDDIIHVLEENTGTDTVEVIIIDLY---NDKEVQWSGTAFEN 557

Query: 365 MTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGEL 424
           M NL++L I + +   G + L N L +L W GY  + LP +    K + + +  S +   
Sbjct: 558 MKNLKILIIRSARFSRGPKKLPNSLGVLDWSGYSSQSLPGDFNPKKLMMLSLHESCLIS- 616

Query: 425 WKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIIL 484
           +K +K  + L  +     + L  +P  +G  NL  L L+ CT L  +H S+   NKL++L
Sbjct: 617 FKSLKVFESLSFLDFEGCKLLTELPSLSGLVNLGALCLDDCTNLIAVHKSVGFLNKLVLL 676

Query: 485 NMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHME 544
           + + C  L  L   I + SLE                  TLD+ G L+ + FPE++  ME
Sbjct: 677 STQRCNQLELLVPNINLPSLE------------------TLDMRGCLRLKSFPEVLGVME 718

Query: 545 HLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKL 604
           ++  ++L+ T+I  LP SI  L GL  L L+ C SL  LP ++  L  L  +   GC   
Sbjct: 719 NIRYVYLDQTSIDKLPFSIRNLVGLRQLFLRECASLTQLPDSIHILPKLEIITAYGCIGF 778

Query: 605 -----------KKFPEIVRSMKDLSELFLDGTSIKEVP-SSIELLTKLELLNLSDCKNLV 652
                      K FP+ +   K+ S + LD +S+   P ++IE+           C + +
Sbjct: 779 RLFEDKEKVGSKVFPKAMLVYKEGSPVLLDMSSLNICPDNAIEVF----------CSSFI 828

Query: 653 RLPSSIIALKSLK 665
           R+ +  I++  L+
Sbjct: 829 RMNADFISIGILE 841



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 103/191 (53%), Gaps = 6/191 (3%)

Query: 496 PGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-T 554
           P K++M SL +  L S  + +   + LS LD  G     E P +   + +L  L L+  T
Sbjct: 601 PKKLMMLSLHESCLISFKS-LKVFESLSFLDFEGCKLLTELPSL-SGLVNLGALCLDDCT 658

Query: 555 AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
            +  +  S+  L+ LVLL+ + C  LE+L   + NL  L +L + GC +LK FPE++  M
Sbjct: 659 NLIAVHKSVGFLNKLVLLSTQRCNQLELLVPNI-NLPSLETLDMRGCLRLKSFPEVLGVM 717

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC-- 672
           +++  ++LD TSI ++P SI  L  L  L L +C +L +LP SI  L  L+ +   GC  
Sbjct: 718 ENIRYVYLDQTSIDKLPFSIRNLVGLRQLFLRECASLTQLPDSIHILPKLEIITAYGCIG 777

Query: 673 FKLENVPETLG 683
           F+L    E +G
Sbjct: 778 FRLFEDKEKVG 788



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 27/159 (16%)

Query: 585 VTVSNLKCLRSLKL---SGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKL 640
           ++  +LK   SL      GC  L + P +   + +L  L LD  T++  V  S+  L KL
Sbjct: 615 ISFKSLKVFESLSFLDFEGCKLLTELPSL-SGLVNLGALCLDDCTNLIAVHKSVGFLNKL 673

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
            LL+   C  L  L  +I  L SL+TL++ GC +L++ PE LG +E++  + +  T++  
Sbjct: 674 VLLSTQRCNQLELLVPNI-NLPSLETLDMRGCLRLKSFPEVLGVMENIRYVYLDQTSID- 731

Query: 701 STSWYSYIPINLMRKSVALKLP-SLSGLCSLRKLNLTDC 738
                              KLP S+  L  LR+L L +C
Sbjct: 732 -------------------KLPFSIRNLVGLRQLFLREC 751



 Score = 43.9 bits (102), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 26/191 (13%)

Query: 633 SIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD 692
           S+++   L  L+   CK L  LPS +  L +L  L L  C  L  V +++G +  L    
Sbjct: 619 SLKVFESLSFLDFEGCKLLTELPS-LSGLVNLGALCLDDCTNLIAVHKSVGFLNKL---- 673

Query: 693 ISGTAVPHSTSWYSYIPINLMR-KSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGN 751
                          + ++  R   + L +P+++ L SL  L++  C L   + P  +G 
Sbjct: 674 ---------------VLLSTQRCNQLELLVPNIN-LPSLETLDMRGC-LRLKSFPEVLGV 716

Query: 752 LCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP---QLPPNIRQVRVNGCA 808
           + +++ +YL + S   LP SI +L  L  + L +C  L  LP    + P +  +   GC 
Sbjct: 717 MENIRYVYLDQTSIDKLPFSIRNLVGLRQLFLRECASLTQLPDSIHILPKLEIITAYGCI 776

Query: 809 SLVTLLDALKL 819
                 D  K+
Sbjct: 777 GFRLFEDKEKV 787


>gi|82542033|gb|ABB82024.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1078

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 258/681 (37%), Positives = 385/681 (56%), Gaps = 31/681 (4%)

Query: 11  LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK-GGLVSLQ 69
            + + + DVR++GI GM G+GKTT+A+VV++ + + FE S FL N+ E S +  GLV LQ
Sbjct: 241 FLSTATDDVRIVGIHGMPGIGKTTLAKVVFNQLCYRFEGSCFLSNINESSKQVNGLVPLQ 300

Query: 70  RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG 129
           +QLL  + K    +I  V  G  M+  RL RK+VL+V DDV  ++Q  +L G R WFG G
Sbjct: 301 KQLLHDISKQDVANINCVDRGKVMIKDRLCRKRVLVVADDVAHLEQQNALMGERSWFGPG 360

Query: 130 SRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRY 189
           SR+IIT+RD +LL+    D  Y+   L  DE+LQLF+  AFK  +P ++ ++LS   + Y
Sbjct: 361 SRVIITTRDSNLLRE--ADRTYQIEELKPDESLQLFSCHAFKDSKPAKDYIKLSKDAVDY 418

Query: 190 AGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELE-KKIFLD 248
            GGLPLALEV+G+ LSG++ D W+  +E+L   P  +I   L+ISFD L   E +  FLD
Sbjct: 419 CGGLPLALEVMGACLSGKNRDGWKCVIEKLRRIPNHDIQGRLRISFDALDGEELQNAFLD 478

Query: 249 IACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQELGQQIV 306
           IACFF    ++YV   L   CG++P + ++ L  + LI V     + MHDLL+++G+++V
Sbjct: 479 IACFFIDRKKEYVAKVLGARCGYNPEVDLQTLHGRSLIKVDAIGKITMHDLLRDMGREVV 538

Query: 307 QRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMT 366
           +  SP+E GKR+R+W +E+  +VL +  GT++VEG+ LD    + +     SA  F++M 
Sbjct: 539 RETSPKEPGKRTRIWNQEDAWNVLEQQKGTDVVEGLALDVRASKAKSL---SAGLFAEMK 595

Query: 367 NLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWK 426
            L LL+I  + L    + LS  L  + W   PLK  PS+   D    + M YS + ELWK
Sbjct: 596 CLNLLQINGVHLTGSFKLLSKELMWICWHRCPLKDFPSDFTADYLAVLDMQYSNLKELWK 655

Query: 427 GIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNM 486
           G K L++LK+  LSHS NL++ P+   + +LEKLIL+GC+ L E+H S+     L+ LN+
Sbjct: 656 GKKILNRLKIFNLSHSRNLVKTPNLHSS-SLEKLILKGCSSLVEVHQSIGHSTSLVFLNL 714

Query: 487 KDCTSLITLPGKIL-MKSLEKL------NLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
           K C SL TLP  I  +KSLE +       L+ LP  +  +K L+ L   G +K  +F   
Sbjct: 715 KGCWSLKTLPESIRNVKSLETMKIYGCSQLEKLPEGMGDMKFLTELLADG-IKTEQFLSS 773

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
           +  ++++  L L G +    P S  L+S  V  ++  C     LP + +  + ++ L LS
Sbjct: 774 IGQLKYVKRLSLRGCS--PTPPSCSLISAGV--SILKC----WLPTSFTEWRLVKHLMLS 825

Query: 600 GCSKLKKFPEIV--RSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSS 657
            C    +    V    +  L +L L       +P  I  L KL  L +  C+ LV +P  
Sbjct: 826 NCGLSDRATNCVDFSGLFSLEKLDLSENKFSSLPYGIGFLPKLSHLVVQTCEYLVSIPD- 884

Query: 658 IIALKSLKTLNLSGCFKLENV 678
                SL  L+ S C  LE  
Sbjct: 885 --LPSSLCLLDASSCKSLERA 903



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 150/361 (41%), Gaps = 76/361 (21%)

Query: 580 LEILPVTVSNLK----------CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIK 628
           L +L +  SNLK           L+   LS    L K P +  S   L +L L G +S+ 
Sbjct: 640 LAVLDMQYSNLKELWKGKKILNRLKIFNLSHSRNLVKTPNLHSS--SLEKLILKGCSSLV 697

Query: 629 EVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
           EV  SI   T L  LNL  C +L  LP SI  +KSL+T+ + GC +LE +PE +G ++ L
Sbjct: 698 EVHQSIGHSTSLVFLNLKGCWSLKTLPESIRNVKSLETMKIYGCSQLEKLPEGMGDMKFL 757

Query: 689 EELDISGTAVPH---STSWYSYIPINLMRKSVALKLPSLSGLCS---------------- 729
            EL   G        S     Y+   L  +  +   PS S + +                
Sbjct: 758 TELLADGIKTEQFLSSIGQLKYVK-RLSLRGCSPTPPSCSLISAGVSILKCWLPTSFTEW 816

Query: 730 --LRKLNLTDCNLMEGALPS-DIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDC 786
             ++ L L++C L + A    D   L SL++L LS+N F SLP  I  L KL ++ ++ C
Sbjct: 817 RLVKHLMLSNCGLSDRATNCVDFSGLFSLEKLDLSENKFSSLPYGIGFLPKLSHLVVQTC 876

Query: 787 KRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSML 846
           + L S+P LP ++  +  + C SL        +C                    + FS+ 
Sbjct: 877 EYLVSIPDLPSSLCLLDASSCKSL-----ERAMCNRGHGY-------------RINFSLE 918

Query: 847 REYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFH 906
            + L                 E+P+W  Y+ EG S++   P   +      G  +C   H
Sbjct: 919 HDELH----------------EMPDWMSYRGEGCSLSFHIPPVFH------GLVLCNQMH 956

Query: 907 V 907
            
Sbjct: 957 A 957


>gi|147821054|emb|CAN77694.1| hypothetical protein VITISV_029044 [Vitis vinifera]
          Length = 1530

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 255/673 (37%), Positives = 383/673 (56%), Gaps = 73/673 (10%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           E L+ +M++  + V +IGICG GG+GKTTIA+ +Y+ IS++++ S FL N+RE  SKG +
Sbjct: 204 ENLKSMMNTELNKVNVIGICGTGGIGKTTIAKAIYNEISYQYDGSSFLRNMRE-RSKGDI 262

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
           + LQ++LL  +LK     I NV +G++M+   L  K+VL++  DV D+ QL+ LA  ++W
Sbjct: 263 LQLQKELLHGILKGKGFRISNVDEGVNMIKRCLNSKRVLVIFYDVDDLTQLEYLAEEKDW 322

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSAR 185
           F   S IIITSRD+ +L  +GV   Y+    N  EA++LF++ AFK   P +    LS  
Sbjct: 323 FDVKSTIIITSRDKQVLAHYGVHISYEVSKFNNKEAIELFSLWAFKQNLPKEAYKNLSYN 382

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           +I YA GLPLAL++LG+ L G+ + EW S L +L+  P  EI  +L+ISFDGL +++KKI
Sbjct: 383 MIEYADGLPLALKLLGASLFGKKISEWESALYKLKRIPHMEINKVLRISFDGLDDMDKKI 442

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQI 305
           FLD+ACFFK  D+ +V+  L   G H   GI  L +KCLIT+  N + MHDL+Q++G++I
Sbjct: 443 FLDVACFFKEKDKYFVSRIL---GPHAEYGIATLNDKCLITISKNMIDMHDLIQQMGREI 499

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKM 365
           ++++ PE+LG+RSR+W + +  HVLT + GT  +EG+ LD    +   +   + ++F +M
Sbjct: 500 IRQECPEDLGRRSRVW-DSDAYHVLTRNMGTRAIEGLFLDICKFDPIQF---AKESFKQM 555

Query: 366 TNLRLLKICNLQ---------------------LPNGLEYLSNRLRLLGWRGYPLKFLPS 404
             LRLLKI                         LP   E+ S++L  L W GY L+ LP+
Sbjct: 556 DRLRLLKIHKGDEYDLISVFGSHPYEKLFYEDCLPRDFEF-SSKLTYLHWDGYSLESLPT 614

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
           N      +E+ +  S I +LW+G K  ++LKV+ L++S +L  +PDF+  PNLE L LEG
Sbjct: 615 NFHAKDLVELILRGSNIKQLWRGNKLHNELKVINLNYSVHLTEIPDFSSVPNLEILTLEG 674

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLST 524
           C +                                         L+ LP  I   K L T
Sbjct: 675 CVK-----------------------------------------LECLPRGIYKWKYLQT 693

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSI-ELLSGLVLLNLKNCRSLEIL 583
           L   G  K + FPEI  +M  L EL L GTAI+ LP S+ E L  L +L+ +    L  +
Sbjct: 694 LSCRGCSKLKRFPEIKGNMRKLRELDLSGTAIKVLPSSLFEHLKALEILSFRMSSKLNKI 753

Query: 584 PVTVSNLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL 642
           P+ +  L  L  L LS C+ ++   P  +  +  L EL L     + +P++I  L++L++
Sbjct: 754 PIDICCLSSLEVLDLSHCNIMEGGIPSDICHLSSLKELNLKSNDFRSIPATINQLSRLQV 813

Query: 643 LNLSDCKNLVRLP 655
           LNLS C+NL  +P
Sbjct: 814 LNLSHCQNLQHIP 826



 Score =  206 bits (523), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 151/467 (32%), Positives = 232/467 (49%), Gaps = 56/467 (11%)

Query: 551  LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI 610
             + + ++ LP+ IE  S L  L L++C++L+ LP ++   K L +L  SGCS+L+ FPEI
Sbjct: 1105 FKDSDMKELPI-IENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEI 1163

Query: 611  VRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLS 670
            +  M    +L LDGT+IKE+PSSI+ L  L+ LNL+ C+NLV LP SI  L SL+TL + 
Sbjct: 1164 LEDMVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVV 1223

Query: 671  GCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSL 730
             C KL  +PE LG+++SLE L +                      S+  +LPSLSGLCSL
Sbjct: 1224 SCPKLNKLPENLGRLQSLEYLYVKDL------------------DSMNCQLPSLSGLCSL 1265

Query: 731  RKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQ 790
              L L +C L E  +PS I +L SL+ L L  N F S+P  I  L  L+  +L  C+ LQ
Sbjct: 1266 ITLQLINCGLRE--IPSGIWHLSSLQHLSLRGNRFSSIPDGINQLYNLIVFDLSHCQMLQ 1323

Query: 791  SLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYL 850
             +P+LP ++  +  + C+SL  L     L    S++  C  S ++   K      ++E+ 
Sbjct: 1324 HIPELPSSLEYLDAHQCSSLEILSSPSTLLW--SSLFKCFKS-RIQRQKIYTLLSVQEF- 1379

Query: 851  EAVSNTRQHLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLK 909
                     + + +PGS  IP W  +Q  GS IT+  P   Y     +G+A+C +   L 
Sbjct: 1380 ----EVNFKVQMFIPGSNGIPGWISHQKNGSKITMRLPRYWYENDDFLGFALCSLHVPLD 1435

Query: 910  NSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQA----------GSDHLWLLYLSRQT 959
                N  F         C +          D F              S+ +WL+Y  +  
Sbjct: 1436 IEEENRSF--------KCKLNFNNRAFLLVDDFWSKRNCERCLHGDESNQVWLIYYPKS- 1486

Query: 960  CYDIRLPLESNLEPFESNHVNVSFEPWLG-QGLEVKMCGLHPVYMDE 1005
                ++P + +   + +  +N SF  + G + ++V+ CG H +Y  E
Sbjct: 1487 ----KIPKKYHSNEYRT--LNTSFSEYFGTEPVKVERCGFHFIYAQE 1527



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 118/355 (33%), Positives = 176/355 (49%), Gaps = 20/355 (5%)

Query: 559 LPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLS 618
           LP   E  S L  L+     SLE LP    + K L  L L G S +K+     +   +L 
Sbjct: 589 LPRDFEFSSKLTYLHWDG-YSLESLPTNF-HAKDLVELILRG-SNIKQLWRGNKLHNELK 645

Query: 619 ELFLD-GTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLEN 677
            + L+    + E+P     +  LE+L L  C  L  LP  I   K L+TL+  GC KL+ 
Sbjct: 646 VINLNYSVHLTEIPD-FSSVPNLEILTLEGCVKLECLPRGIYKWKYLQTLSCRGCSKLKR 704

Query: 678 VPETLGQIESLEELDISGTAV---PHSTSWY-SYIPINLMRKSVAL-KLP-SLSGLCSLR 731
            PE  G +  L ELD+SGTA+   P S   +   + I   R S  L K+P  +  L SL 
Sbjct: 705 FPEIKGNMRKLRELDLSGTAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICCLSSLE 764

Query: 732 KLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQS 791
            L+L+ CN+MEG +PSDI +L SLKEL L  N F S+P +I  LS+L  + L  C+ LQ 
Sbjct: 765 VLDLSHCNIMEGGIPSDICHLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLQH 824

Query: 792 LPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLE 851
           +P+LP ++R +  +G     +    L +     +++ C +S     N S    +  E   
Sbjct: 825 IPELPSSLRLLDAHGSNPTSSRASFLPV----HSLVNCFNSEIQDLNCSSRNEVWSENSV 880

Query: 852 AVSNTRQHLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
           +   ++  + +V+PGS  +PEW M   +   I    P N     + +G+A+CCV+
Sbjct: 881 STYGSKG-ICIVLPGSSGVPEWIM---DDQGIATELPQNWNQNNEFLGFALCCVY 931



 Score =  104 bits (260), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 509  LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSG 568
            LKSLP++I   K L+TL  SG  +   FPEI+E M    +L L+GTAI+ +P SI+ L G
Sbjct: 1133 LKSLPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDLDGTAIKEIPSSIQRLRG 1192

Query: 569  LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSI 627
            L  LNL  C +L  LP ++ NL  LR+L +  C KL K PE +  ++ L  L++ D  S+
Sbjct: 1193 LQYLNLAYCENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSM 1252

Query: 628  KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
                 S+  L  L  L L +C  L  +PS I  L SL+ L+L G  +  ++P+ + Q+ +
Sbjct: 1253 NCQLPSLSGLCSLITLQLINC-GLREIPSGIWHLSSLQHLSLRG-NRFSSIPDGINQLYN 1310

Query: 688  LEELDIS 694
            L   D+S
Sbjct: 1311 LIVFDLS 1317



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 19/183 (10%)

Query: 419  SRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPNLEKLILEGCTRLYEIHPSLLL 477
            + I E+   I+ L  L+ + L++ ENL+ +P+      +L  LI+  C +L ++  +L  
Sbjct: 1178 TAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLGR 1237

Query: 478  HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
               L  L +KD               L+ +N + LP ++SGL  L TL +  +   RE P
Sbjct: 1238 LQSLEYLYVKD---------------LDSMNCQ-LP-SLSGLCSLITLQLI-NCGLREIP 1279

Query: 538  EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
              + H+  L  L L G     +P  I  L  L++ +L +C+ L+ +P   S+L+ L + +
Sbjct: 1280 SGIWHLSSLQHLSLRGNRFSSIPDGINQLYNLIVFDLSHCQMLQHIPELPSSLEYLDAHQ 1339

Query: 598  LSG 600
             S 
Sbjct: 1340 CSS 1342



 Score = 47.0 bits (110), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 125/281 (44%), Gaps = 26/281 (9%)

Query: 456  NLEKLILEGCTRLY---EIHPSLLLHNKLIILNMKDCTSLITLPGKIL-MKSLEKLNLK- 510
            +L  L   GC++L    EI   +++  KL +    D T++  +P  I  ++ L+ LNL  
Sbjct: 1145 SLTTLSCSGCSQLESFPEILEDMVVFQKLDL----DGTAIKEIPSSIQRLRGLQYLNLAY 1200

Query: 511  -----SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPL-SIE 564
                 +LP +I  L  L TL V    K  + PE +  ++ L  L+++        L S+ 
Sbjct: 1201 CENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSMNCQLPSLS 1260

Query: 565  LLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG 624
             L  L+ L L NC   EI P  + +L  L+ L L G ++    P+ +  + +L  +  D 
Sbjct: 1261 GLCSLITLQLINCGLREI-PSGIWHLSSLQHLSLRG-NRFSSIPDGINQLYNL--IVFDL 1316

Query: 625  TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQ 684
            +  + +    EL + LE L+   C +L  L S    L S    +L  CFK     + +  
Sbjct: 1317 SHCQMLQHIPELPSSLEYLDAHQCSSLEILSSPSTLLWS----SLFKCFKSRIQRQKIYT 1372

Query: 685  IESLEELDISGTA---VPHSTSWYSYIPINLMRKSVALKLP 722
            + S++E +++      +P S     +I        + ++LP
Sbjct: 1373 LLSVQEFEVNFKVQMFIPGSNGIPGWISHQKNGSKITMRLP 1413


>gi|297813715|ref|XP_002874741.1| hypothetical protein ARALYDRAFT_327329 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297320578|gb|EFH51000.1| hypothetical protein ARALYDRAFT_327329 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1212

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 278/748 (37%), Positives = 411/748 (54%), Gaps = 84/748 (11%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR + L  L+     D V +IGI GM G+GKTT+A  +Y  +   F+ S FL N+RE 
Sbjct: 179 IESRLKNLEKLLSWEDLDSVHIIGIVGMVGIGKTTLADCLYGRMRGRFDGSCFLTNIREN 238

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S + GL  L ++L S +L   D  I    +  +    RL+ K++L+V+DDV D KQ++ L
Sbjct: 239 SGRSGLEYLLQKLFSTVLNDRDLEIGAPGNAHERFERRLKSKRLLIVLDDVNDEKQIRYL 298

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G+ +W+  GSRIIIT+RD  L++T    +   P  LN  EAL+LF++ AF    P +E 
Sbjct: 299 MGHCKWYQGGSRIIITTRDCKLIETIKGRKYVLPK-LNDREALKLFSLNAFNDSCPSKEF 357

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             L+  ++ YA G PLAL+VLGS L  R    W + L+RL+     +I ++L+ S++ L 
Sbjct: 358 EGLTNMVLDYAKGHPLALKVLGSDLCERDNLYWEAKLDRLKCRSHGDIYEVLETSYEELT 417

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
             +K +FLDIACFF+  + DYVT+ L   G      I+ L++KCLIT+ +N + MHD+LQ
Sbjct: 418 IEQKNVFLDIACFFRSENVDYVTSLLNSHGVDVSSVIKDLVDKCLITLSDNRIEMHDMLQ 477

Query: 300 ELGQQIVQRQSPEELGKRS---------------RLWKEEEVCHVLTESTGTELVEGIVL 344
            +G++I  +   E +G R                RLW  E++C +LT+  GT+ + GI L
Sbjct: 478 TMGKEISLK--AETIGIRDFTWLSRHGNQCQWHIRLWDSEDICDILTKGQGTDKIRGIFL 535

Query: 345 DNYHHENEVYLCASAKAFSKMTNLRLLKICN------------LQLPNGLEYLSNRLRLL 392
           D         +  SAKA   M NL+ LKI +            L L  GL+YL N L  L
Sbjct: 536 DTSKLR---AMRLSAKALKGMYNLKYLKIYDSHCSRGCEVEFKLHLRKGLDYLPNELTYL 592

Query: 393 GWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFT 452
            W GYPL+ +P +      +++ + +S++ E+W   K    LK + LSHS NL +     
Sbjct: 593 HWHGYPLQSIPLDFDPKNLVDLKLPHSQLAEIWDDEKDAGMLKWVDLSHSLNLHQCLGLA 652

Query: 453 GAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSL 512
            A NLE+L LEGCT L ++  ++    KL+ LN++DCTSL +LP  +  +SL+       
Sbjct: 653 NAQNLERLNLEGCTSLKKLPTTINGLEKLVYLNLRDCTSLRSLPKGLKTQSLQ------- 705

Query: 513 PTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLL 572
                      TL +SG  + ++FP I E++E    L L+GTAI+ LP SIE L  L LL
Sbjct: 706 -----------TLILSGCSRLKKFPLISENVE---VLLLDGTAIKSLPESIETLRRLALL 751

Query: 573 NLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPS 632
           NLKNC+ L+ L   +  LKCL+ L LSGCS+L+ FPEI   M+ L  L +D T+I E+P 
Sbjct: 752 NLKNCKKLKHLSSDLYKLKCLQELILSGCSRLEVFPEIKEDMESLEILLMDDTAITEMPK 811

Query: 633 SIEL---------------------------LTKLELLNLSDCKNLVRLPSSIIALKSLK 665
            + L                            ++L  L LS C +L +LP +I  L SL+
Sbjct: 812 MMHLSNIQTFSLCGTSSQVSVSMFFMPPTLGCSRLTDLYLSRC-SLYKLPDNIGGLSSLQ 870

Query: 666 TLNLSGCFKLENVPETLGQIESLEELDI 693
           +L LSG   +EN+PE+  Q+ +L+  D+
Sbjct: 871 SLCLSG-NNIENLPESFNQLHNLKWFDL 897



 Score =  159 bits (403), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 158/512 (30%), Positives = 248/512 (48%), Gaps = 61/512 (11%)

Query: 542  HMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
            + ++L  L+LEG T+++ LP +I  L  LV LNL++C SL  LP  +   + L++L LSG
Sbjct: 653  NAQNLERLNLEGCTSLKKLPTTINGLEKLVYLNLRDCTSLRSLPKGLKT-QSLQTLILSG 711

Query: 601  CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
            CS+LKKFP I    +++  L LDGT+IK +P SIE L +L LLNL +CK L  L S +  
Sbjct: 712  CSRLKKFPLIS---ENVEVLLLDGTAIKSLPESIETLRRLALLNLKNCKKLKHLSSDLYK 768

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYIPINLMRKSV 717
            LK L+ L LSGC +LE  PE    +ESLE L +  TA+   P      +    +L   S 
Sbjct: 769  LKCLQELILSGCSRLEVFPEIKEDMESLEILLMDDTAITEMPKMMHLSNIQTFSLCGTSS 828

Query: 718  ALK-----LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSI 772
             +      +P   G   L  L L+ C+L +  LP +IG L SL+ L LS N+  +LP S 
Sbjct: 829  QVSVSMFFMPPTLGCSRLTDLYLSRCSLYK--LPDNIGGLSSLQSLCLSGNNIENLPESF 886

Query: 773  THLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL---LDALKLCKSDSTMIAC 829
              L  L   +L+ CK L+SLP LP N++ +  + C SL TL   L  L + +   +M   
Sbjct: 887  NQLHNLKWFDLKFCKMLKSLPVLPQNLQYLDAHECESLETLENPLTPLTVGERIHSMFIF 946

Query: 830  LDSLKLLGNKS--LAFSMLREYLEAVSNTRQHLSVVVP---------GSEIPEWFMYQNE 878
             +  KL  +    +  + ++  L A ++ +++    +P          ++IP WF +Q  
Sbjct: 947  SNCYKLNQDAQSLVGHARIKSQLMANASVKRYYRGFIPEPLVGICYAATDIPSWFCHQRL 1006

Query: 879  GSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGN-----NCFGSYPTHQLNCHIGHGI 933
            G S+ +  P + +     VG A+  V   +            C G +  +Q         
Sbjct: 1007 GRSLEIPLPPH-WCDTDFVGLALSVVVSFMDYEDSAKRFSVKCCGKF-ENQDGSFTRFDF 1064

Query: 934  YGIGFRDKFG-------QAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESN--HVNVSFE 984
               G+ +  G       +  SDH+++ Y    +C+ ++     NL     N  +   SFE
Sbjct: 1065 TLAGWNEPCGSLSHEPRKLASDHVFMGY---NSCFHVK-----NLHGESKNCCYTKASFE 1116

Query: 985  PWLG--------QGLEVKMCGLHPVYMDEVEE 1008
             ++         +  EV  CG+  VY+ E ++
Sbjct: 1117 FYVTDDETRKKIETCEVIKCGMSLVYVPEDDD 1148


>gi|15227238|ref|NP_179024.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|330251184|gb|AEC06278.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1215

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 306/908 (33%), Positives = 462/908 (50%), Gaps = 68/908 (7%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M +  EKL  L+   S +VRMIGI G  G+GKTTI R +Y+ +S  FE S F++N++ + 
Sbjct: 233  MGAHMEKLELLLCLDSCEVRMIGIWGPPGIGKTTIVRFLYNQLSSSFELSIFMENIKTMH 292

Query: 61   S-------KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDV 113
            +           + LQRQ LS++L   D  I      + +L  RL  KKVL+V+DDV   
Sbjct: 293  TILASSDDYSAKLILQRQFLSKILDHKDIEI----PHLRVLQERLYNKKVLVVLDDVDQS 348

Query: 114  KQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY 173
             QL +LA    WFG  SRI+IT++D  LLK H ++ +YK    N D+ALQ+F M AF   
Sbjct: 349  VQLDALAKETRWFGPRSRILITTQDRKLLKAHRINNIYKVDLPNSDDALQIFCMYAFGQK 408

Query: 174  QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
             P     +L+ ++    G  PL L V+GS+    S  EWR  + RL      +I  +L+ 
Sbjct: 409  TPYDGFYKLARKVTWLVGNFPLGLRVVGSYFREMSKQEWRKEIPRLRARLDGKIESVLKF 468

Query: 234  SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLW 293
            S+D L + +K +FL IACFF     + + +FL            VL EK LI++++N + 
Sbjct: 469  SYDALCDEDKDLFLHIACFFNHESIEKLEDFLGKTFLDIAQRFHVLAEKSLISINSNFVE 528

Query: 294  MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTEST-GTELVEGIVLDNYHHENE 352
            MHD L +LG++IV++QS  E G+R  L    ++  VL + T G   V GI LD   H N+
Sbjct: 529  MHDSLAQLGKEIVRKQSVREPGQRQFLVDARDISEVLADDTAGGRSVIGIYLD--LHRND 586

Query: 353  VYLCASAKAFSKMTNLRLLKICNLQ--------LPNGLEYLSNRLRLLGWRGYPLKFLPS 404
                 S KAF  M+NL+ L++ N          LP+ L Y+S +LRLL W  +P+   PS
Sbjct: 587  DVFNISEKAFEGMSNLQFLRVKNFGNLFPAIVCLPHCLTYISRKLRLLDWMYFPMTCFPS 646

Query: 405  NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
                +  +E+ M  S++ +LW+ I+ L  LK M L  S+NL  +PD + A NLE L L G
Sbjct: 647  KFNPEFLVELNMWGSKLEKLWEEIQPLRNLKRMDLFSSKNLKELPDLSSATNLEVLNLNG 706

Query: 465  CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLST 524
            C+ L E+  S+    KL+ L +  C+SL+                  LP++I     L T
Sbjct: 707  CSSLVELPFSIGNATKLLKLELSGCSSLL-----------------ELPSSIGNAINLQT 749

Query: 525  LDVSGDLKFREFPEIVEHMEHLSELHLE-GTAIRGLPLSIELLSGLVLLNLKNCRSLEIL 583
            +D S      E P  + +  +L EL L   ++++ LP SI   + L  L+L  C SL+ L
Sbjct: 750  IDFSHCENLVELPSSIGNATNLKELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSLKEL 809

Query: 584  PVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLEL 642
            P ++ N   L+ L L+ CS L K P  + +  +L +L L G  S+ E+PS I   T L++
Sbjct: 810  PSSIGNCTNLKELHLTCCSSLIKLPSSIGNAINLEKLILAGCESLVELPSFIGKATNLKI 869

Query: 643  LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHST 702
            LNL     LV LPS I  L  L  L L GC KL+ +P  +  +E L ELD++   +  + 
Sbjct: 870  LNLGYLSCLVELPSFIGNLHKLSELRLRGCKKLQVLPTNIN-LEFLNELDLTDCILLKT- 927

Query: 703  SWYSYIPINL----MRKSVALKLPSLSGLCSLRKL-NLTDCNLMEGALPSDIGN-LCSLK 756
              +  I  N+    +R +   ++PS     SLR    L D  ++     S+  + L  + 
Sbjct: 928  --FPVISTNIKRLHLRGTQIEEVPS-----SLRSWPRLEDLQMLYSENLSEFSHVLERIT 980

Query: 757  ELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDA 816
             L LS  +   +   +  +++L  ++L  C +L SLPQL  ++  +    C SL  L   
Sbjct: 981  VLELSDINIREMTPWLNRITRLRRLKLSGCGKLVSLPQLSDSLIILDAENCGSLERL--- 1037

Query: 817  LKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQ 876
               C  ++  I CLD    L     A  ++      +  T +H S ++P  E+ E+   +
Sbjct: 1038 --GCSFNNPNIKCLDFTNCLKLDKEARDLI------IQATARHYS-ILPSREVHEYITNR 1088

Query: 877  NEGSSITV 884
              GSS+TV
Sbjct: 1089 AIGSSLTV 1096


>gi|356499237|ref|XP_003518448.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1176

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 273/654 (41%), Positives = 388/654 (59%), Gaps = 50/654 (7%)

Query: 3   SRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK 62
           SR +K+  L+   S DVR IGI GMGG+GKTT+ARVV+  I  +F+ S FLDNVREIS +
Sbjct: 197 SRVKKMDSLLSIESEDVRFIGIWGMGGIGKTTVARVVFQKIKDQFDVSCFLDNVREISRE 256

Query: 63  -GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAG 121
             G++ LQ +LLS  L +    I ++ +G + + + L  KKVLLV+DDV D  QL +LA 
Sbjct: 257 TNGMLRLQTKLLSH-LAIKGLEIIDLDEGKNTIINLLSEKKVLLVLDDVDDTSQLGNLAK 315

Query: 122 NREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQ 181
             EWFG GSR+IIT+RD  +L +HGV E Y    LN DE+LQL + KAFK  +PL+  ++
Sbjct: 316 RVEWFGRGSRVIITTRDTQVLISHGVVENYNIEFLNSDESLQLLSQKAFKRDEPLEHYLE 375

Query: 182 LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERL-EIEPPSEILDILQISFDGLQE 240
           LS  + ++AGGLPLALE+LGSFL GRS  +WR  ++ + E+     ++  L+IS++GL  
Sbjct: 376 LSKVVAKHAGGLPLALELLGSFLCGRSEFQWREVVDMIKEVSASHIVMKSLRISYNGLPR 435

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             K +FLDIACFFKG  ++  T  LE C  +P +GI +L+EK L T    T+ MHDLLQE
Sbjct: 436 CHKALFLDIACFFKGRVKELATQTLEICDRYPAVGIELLVEKSLATYDGFTIGMHDLLQE 495

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
             ++IV  +S  + GKRSRLW  E+   VL  S   E +EGI L++   +   +     +
Sbjct: 496 TAREIVIEESHVDAGKRSRLWSLEDTNQVLKYSRENESIEGIALNSPEKDEANW---DPE 552

Query: 361 AFSKMTNLRLLKIC-NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           AFS+M NLRLL I   ++L  GL+ L + L+ L W  + L+ LP  +Q+D+ +E+ M  S
Sbjct: 553 AFSRMYNLRLLIISFPIKLARGLKCLCSSLKFLQWNDFSLETLPLGVQLDELVELKMYSS 612

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
           +I  +W G +   KLK + LS+SE+LI+ P  +GAP LE+++L GC  L E+HPS+  H 
Sbjct: 613 KIKNIWNGNQAFAKLKFIDLSYSEDLIQTPIVSGAPCLERMLLIGCINLVEVHPSVGQHK 672

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
           +L++L MK+C +L  +P K+ M SLE+L L                  SG  K ++ PE 
Sbjct: 673 RLVVLCMKNCKNLQIMPRKLEMDSLEELIL------------------SGCSKVKKLPEF 714

Query: 540 VEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKL 598
            ++M+ LS L +E    +  LP SI         NLK+ R L I                
Sbjct: 715 GKNMKSLSLLSVENCINLLCLPNSI--------CNLKSLRKLNI---------------- 750

Query: 599 SGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV 652
           SGCS+L   P  +   + L EL + GT+I+E+  S   L KL+ L+    K L 
Sbjct: 751 SGCSRLSTLPNGLNENESLEELDVSGTAIREITLSKVRLEKLKELSFGGRKELA 804



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 180/392 (45%), Gaps = 111/392 (28%)

Query: 569  LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIK 628
            LV+L +KNC++L+I+P  +  +  L  L LSGCSK+KK PE  ++MK LS          
Sbjct: 674  LVVLCMKNCKNLQIMPRKLE-MDSLEELILSGCSKVKKLPEFGKNMKSLS---------- 722

Query: 629  EVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
                         LL++ +C NL+ LP+SI  LKSL+ LN+SGC +L  +P  L + ESL
Sbjct: 723  -------------LLSVENCINLLCLPNSICNLKSLRKLNISGCSRLSTLPNGLNENESL 769

Query: 689  EELDISGTAVPHSTSWYSYIPINLM-------RKSVALKLPSLSGLCS--LRKLNLTD-- 737
            EELD+SGTA+   T   S + +  +       RK +A    +L    S  +R+ NL +  
Sbjct: 770  EELDVSGTAIREIT--LSKVRLEKLKELSFGGRKELAPNSQNLLLWISKFMRQPNLKEST 827

Query: 738  -----------------CNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTS-ITHLSKLL 779
                             C+L + + PS +G+L  L++L LS N+FV+ P   I +LS L 
Sbjct: 828  MPPLSSLLALVSLDLSYCDLNDESFPSHLGSLSLLQDLDLSGNNFVNPPAQCIINLSMLQ 887

Query: 780  NIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNK 839
            N+   DC RL+SLP LPPN++ +  N C  L                             
Sbjct: 888  NLSFNDCPRLESLPVLPPNLQGLYANNCPKLK---------------------------- 919

Query: 840  SLAFSMLREYLEAVSNTRQHLS--------VVVPGSEIPEWFMYQN-------------- 877
               F++  E L  +  T+  +          ++PG+EIP WF  QN              
Sbjct: 920  --PFNLDEEMLWKIYETQSRMDPIEGPEVWFIIPGNEIPCWFDNQNCLAIDSSHHPYDKL 977

Query: 878  ---EGSSITVTRPSNLYNKKKLVGYAICCVFH 906
                 +SITV  P +     K  G A+C V  
Sbjct: 978  GCDSVTSITVDVPKDC-QLSKWWGIAVCLVLE 1008


>gi|15238999|ref|NP_196686.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|8953387|emb|CAB96660.1| RPP1 disease resistance protein-like [Arabidopsis thaliana]
 gi|332004269|gb|AED91652.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1189

 Score =  395 bits (1014), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 310/909 (34%), Positives = 480/909 (52%), Gaps = 77/909 (8%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M +  EK++ L+   + +VR+IGI G  G+GKTTIARVVY+ +SH F+ S F++N++   
Sbjct: 239  MRAHLEKMKPLLCLDTDEVRIIGIWGPPGIGKTTIARVVYNQLSHSFQLSVFMENIKANY 298

Query: 61   SK-------GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDV 113
            ++          + LQ+  +SQ+ K  D  I ++    D    RL+ KKVL+V+D V   
Sbjct: 299  TRPTGSDDYSAKLQLQQMFMSQITKQKDIEIPHLGVAQD----RLKDKKVLVVLDGVNQS 354

Query: 114  KQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY 173
             QL ++A    WFG GSRIIIT++D+ L + HG++ +YK      +EALQ+F M AF   
Sbjct: 355  VQLDAMAKEAWWFGPGSRIIITTQDQKLFRAHGINHIYKVDFPPTEEALQIFCMYAFGQN 414

Query: 174  QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
             P      L+ ++I  AG LPL L ++GS+  G S +EW+ +L RLE    ++I  IL+ 
Sbjct: 415  SPKDGFQNLAWKVINLAGNLPLGLRIMGSYFRGMSREEWKKSLPRLESSLDADIQSILKF 474

Query: 234  SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTL 292
            S+D L + +K +FL IACFF G +   +   L          + VL EK LI+  N  T+
Sbjct: 475  SYDALDDEDKNLFLHIACFFNGKEIKILEEHLAKKFVEVRQRLNVLAEKSLISFSNWGTI 534

Query: 293  WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLT-ESTGTELVEGIVLDNYHHEN 351
             MH LL +LG +IV+ QS  E G+R  L+  EE+C VL  ++ G++ V GI   ++H+  
Sbjct: 535  EMHKLLAKLGGEIVRNQSIHEPGQRQFLFDGEEICDVLNGDAAGSKSVIGI---DFHYII 591

Query: 352  EVYLCASAKAFSKMTNLRLLKI-CN---LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
            E     + + F  M+NL+ L+  C+   LQL  GL YLS +L+LL W  +P+  LPS + 
Sbjct: 592  EEEFDMNERVFEGMSNLQFLRFDCDHDTLQLSRGLSYLSRKLQLLDWIYFPMTCLPSTVN 651

Query: 408  MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
            ++  IE+ + +S++  LW+G+K L  L+ M LS+S NL  +PD + A NL KLIL  C+ 
Sbjct: 652  VEFLIELNLTHSKLDMLWEGVKPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSS 711

Query: 468  LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLPTTISGLKC 521
            L ++   +     L  L++  C+SL+ LP      +L+KL      NL  LP++I     
Sbjct: 712  LIKLPSCIGNAINLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNAIN 771

Query: 522  LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
            L  LD                      L+   + IR LP SI     L++L+L  C +L 
Sbjct: 772  LRELD----------------------LYYCSSLIR-LPSSIGNAINLLILDLNGCSNLL 808

Query: 582  ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDL-SELFLDGTSIKEVPSSIELLTKL 640
             LP ++ N   L+ L L  C+KL + P  + +  +L + L  D +S+ E+PSSI   T L
Sbjct: 809  ELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNL 868

Query: 641  ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV-- 698
              +NLS+C NLV LP SI  L+ L+ L L GC KLE++P  +  +ESL+ L ++  ++  
Sbjct: 869  VYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDILVLNDCSMLK 927

Query: 699  --PH-STSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSL 755
              P  ST+  +        + V L + S   L  L  ++  D NL+E     DI     +
Sbjct: 928  RFPEISTNVRALYLCGTAIEEVPLSIRSWPRLDELL-MSYFD-NLVEFPHVLDI-----I 980

Query: 756  KELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLD 815
              L LS      +P  I  +S+L  + L+  +++ SLPQ+P +++ +    C SL  L  
Sbjct: 981  TNLDLSGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQIPDSLKWIDAEDCESLERL-- 1038

Query: 816  ALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMY 875
                C   +  I       L   K    +     L   + T+Q    V+PG E+P +F +
Sbjct: 1039 ---DCSFHNPEIT------LFFGKCFKLNQEARDLIIQTPTKQ---AVLPGREVPAYFTH 1086

Query: 876  QNEGSSITV 884
            +  G S+T+
Sbjct: 1087 RASGGSLTI 1095


>gi|359493229|ref|XP_002264909.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1542

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 255/673 (37%), Positives = 383/673 (56%), Gaps = 73/673 (10%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           E L+ +M++  + V +IGICG GG+GKTTIA+ +Y+ IS++++ S FL N+RE  SKG +
Sbjct: 204 ENLKSMMNTELNKVNVIGICGTGGIGKTTIAKAIYNEISYQYDGSSFLRNMRE-RSKGDI 262

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
           + LQ++LL  +LK     I NV +G++M+   L  K+VL++  DV D+ QL+ LA  ++W
Sbjct: 263 LQLQKELLHGILKGKGFRISNVDEGVNMIKRCLNSKRVLVIFYDVDDLTQLEYLAEEKDW 322

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSAR 185
           F   S IIITSRD+ +L  +GV   Y+    N  EA++LF++ AFK   P +    LS  
Sbjct: 323 FDVKSTIIITSRDKQVLAHYGVHISYEVSKFNNKEAIELFSLWAFKQNLPKEAYKNLSYN 382

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           +I YA GLPLAL++LG+ L G+ + EW S L +L+  P  EI  +L+ISFDGL +++KKI
Sbjct: 383 MIEYADGLPLALKLLGASLFGKKISEWESALYKLKRIPHMEINKVLRISFDGLDDMDKKI 442

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQI 305
           FLD+ACFFK  D+ +V+  L   G H   GI  L +KCLIT+  N + MHDL+Q++G++I
Sbjct: 443 FLDVACFFKEKDKYFVSRIL---GPHAEYGIATLNDKCLITISKNMIDMHDLIQQMGREI 499

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKM 365
           ++++ PE+LG+RSR+W + +  HVLT + GT  +EG+ LD    +   +   + ++F +M
Sbjct: 500 IRQECPEDLGRRSRVW-DSDAYHVLTRNMGTRAIEGLFLDICKFDPIQF---AKESFKQM 555

Query: 366 TNLRLLKICNLQ---------------------LPNGLEYLSNRLRLLGWRGYPLKFLPS 404
             LRLLKI                         LP   E+ S++L  L W GY L+ LP+
Sbjct: 556 DRLRLLKIHKGDEYDLISVFGSHPYEKLFYEDCLPRDFEF-SSKLTYLHWDGYSLESLPT 614

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
           N      +E+ +  S I +LW+G K  ++LKV+ L++S +L  +PDF+  PNLE L LEG
Sbjct: 615 NFHAKDLVELILRGSNIKQLWRGNKLHNELKVINLNYSVHLTEIPDFSSVPNLEILTLEG 674

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLST 524
           C +                                         L+ LP  I   K L T
Sbjct: 675 CVK-----------------------------------------LECLPRGIYKWKYLQT 693

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSI-ELLSGLVLLNLKNCRSLEIL 583
           L   G  K + FPEI  +M  L EL L GTAI+ LP S+ E L  L +L+ +    L  +
Sbjct: 694 LSCRGCSKLKRFPEIKGNMRKLRELDLSGTAIKVLPSSLFEHLKALEILSFRMSSKLNKI 753

Query: 584 PVTVSNLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL 642
           P+ +  L  L  L LS C+ ++   P  +  +  L EL L     + +P++I  L++L++
Sbjct: 754 PIDICCLSSLEVLDLSHCNIMEGGIPSDICHLSSLKELNLKSNDFRSIPATINQLSRLQV 813

Query: 643 LNLSDCKNLVRLP 655
           LNLS C+NL  +P
Sbjct: 814 LNLSHCQNLQHIP 826



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/368 (35%), Positives = 193/368 (52%), Gaps = 41/368 (11%)

Query: 551  LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI 610
             + + ++ LP+ IE  S L  L L++C++L+ LP ++   K L +L  SGCS+L+ FPEI
Sbjct: 1105 FKDSDMKELPI-IENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEI 1163

Query: 611  VRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLS 670
            +  M    +L LDGT+IKE+PSSI+ L  L+ LNL+ C+NLV LP SI  L SL+TL + 
Sbjct: 1164 LEDMVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVV 1223

Query: 671  GCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSL 730
             C KL  +PE LG+++SLE L +                      S+  +LPSLSGLCSL
Sbjct: 1224 SCPKLNKLPENLGRLQSLEYLYVKDL------------------DSMNCQLPSLSGLCSL 1265

Query: 731  RKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQ 790
              L L +C L E  +PS I +L SL+ L L  N F S+P  I  L  L+  +L  C+ LQ
Sbjct: 1266 ITLQLINCGLRE--IPSGIWHLSSLQHLSLRGNRFSSIPDGINQLYNLIVFDLSHCQMLQ 1323

Query: 791  SLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYL 850
             +P+LP ++  +  + C+SL  L     L    S++  C              S ++E+ 
Sbjct: 1324 HIPELPSSLEYLDAHQCSSLEILSSPSTLLW--SSLFKCFK------------SRIQEF- 1368

Query: 851  EAVSNTRQHLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLK 909
                     + + +PGS  IP W  +Q  GS IT+  P   Y     +G+A+C +   L 
Sbjct: 1369 ----EVNFKVQMFIPGSNGIPGWISHQKNGSKITMRLPRYWYENDDFLGFALCSLHVPLD 1424

Query: 910  NSRGNNCF 917
                N  F
Sbjct: 1425 IEEENRSF 1432



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 118/355 (33%), Positives = 176/355 (49%), Gaps = 20/355 (5%)

Query: 559 LPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLS 618
           LP   E  S L  L+     SLE LP    + K L  L L G S +K+     +   +L 
Sbjct: 589 LPRDFEFSSKLTYLHWDG-YSLESLPTNF-HAKDLVELILRG-SNIKQLWRGNKLHNELK 645

Query: 619 ELFLD-GTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLEN 677
            + L+    + E+P     +  LE+L L  C  L  LP  I   K L+TL+  GC KL+ 
Sbjct: 646 VINLNYSVHLTEIPD-FSSVPNLEILTLEGCVKLECLPRGIYKWKYLQTLSCRGCSKLKR 704

Query: 678 VPETLGQIESLEELDISGTAV---PHSTSWY-SYIPINLMRKSVAL-KLP-SLSGLCSLR 731
            PE  G +  L ELD+SGTA+   P S   +   + I   R S  L K+P  +  L SL 
Sbjct: 705 FPEIKGNMRKLRELDLSGTAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICCLSSLE 764

Query: 732 KLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQS 791
            L+L+ CN+MEG +PSDI +L SLKEL L  N F S+P +I  LS+L  + L  C+ LQ 
Sbjct: 765 VLDLSHCNIMEGGIPSDICHLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLQH 824

Query: 792 LPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLE 851
           +P+LP ++R +  +G     +    L +     +++ C +S     N S    +  E   
Sbjct: 825 IPELPSSLRLLDAHGSNPTSSRASFLPV----HSLVNCFNSEIQDLNCSSRNEVWSENSV 880

Query: 852 AVSNTRQHLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
           +   ++  + +V+PGS  +PEW M   +   I    P N     + +G+A+CCV+
Sbjct: 881 STYGSKG-ICIVLPGSSGVPEWIM---DDQGIATELPQNWNQNNEFLGFALCCVY 931



 Score =  104 bits (260), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 509  LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSG 568
            LKSLP++I   K L+TL  SG  +   FPEI+E M    +L L+GTAI+ +P SI+ L G
Sbjct: 1133 LKSLPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDLDGTAIKEIPSSIQRLRG 1192

Query: 569  LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSI 627
            L  LNL  C +L  LP ++ NL  LR+L +  C KL K PE +  ++ L  L++ D  S+
Sbjct: 1193 LQYLNLAYCENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSM 1252

Query: 628  KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
                 S+  L  L  L L +C  L  +PS I  L SL+ L+L G  +  ++P+ + Q+ +
Sbjct: 1253 NCQLPSLSGLCSLITLQLINC-GLREIPSGIWHLSSLQHLSLRG-NRFSSIPDGINQLYN 1310

Query: 688  LEELDIS 694
            L   D+S
Sbjct: 1311 LIVFDLS 1317



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 19/183 (10%)

Query: 419  SRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPNLEKLILEGCTRLYEIHPSLLL 477
            + I E+   I+ L  L+ + L++ ENL+ +P+      +L  LI+  C +L ++  +L  
Sbjct: 1178 TAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLGR 1237

Query: 478  HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
               L  L +KD               L+ +N + LP ++SGL  L TL +  +   RE P
Sbjct: 1238 LQSLEYLYVKD---------------LDSMNCQ-LP-SLSGLCSLITLQLI-NCGLREIP 1279

Query: 538  EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
              + H+  L  L L G     +P  I  L  L++ +L +C+ L+ +P   S+L+ L + +
Sbjct: 1280 SGIWHLSSLQHLSLRGNRFSSIPDGINQLYNLIVFDLSHCQMLQHIPELPSSLEYLDAHQ 1339

Query: 598  LSG 600
             S 
Sbjct: 1340 CSS 1342



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 43/239 (17%)

Query: 456  NLEKLILEGCTRLY---EIHPSLLLHNKLIILNMKDCTSLITLPGKI-LMKSLEKLNLK- 510
            +L  L   GC++L    EI   +++  KL +    D T++  +P  I  ++ L+ LNL  
Sbjct: 1145 SLTTLSCSGCSQLESFPEILEDMVVFQKLDL----DGTAIKEIPSSIQRLRGLQYLNLAY 1200

Query: 511  -----SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIEL 565
                 +LP +I  L  L TL V    K  + PE +  ++ L  L+++             
Sbjct: 1201 CENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKD------------ 1248

Query: 566  LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT 625
                  L+  NC+    LP ++S L  L +L+L  C  L++ P  +  +  L  L L G 
Sbjct: 1249 ------LDSMNCQ----LP-SLSGLCSLITLQLINCG-LREIPSGIWHLSSLQHLSLRGN 1296

Query: 626  SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE--NVPETL 682
                +P  I  L  L + +LS C+ L  +P       SL+ L+   C  LE  + P TL
Sbjct: 1297 RFSSIPDGINQLYNLIVFDLSHCQMLQHIPE---LPSSLEYLDAHQCSSLEILSSPSTL 1352


>gi|356560709|ref|XP_003548631.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1067

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 237/582 (40%), Positives = 352/582 (60%), Gaps = 36/582 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           ++SR +++   +++ S    ++GI GMGGLGKTT+A+V+Y+ I   F  S F++N+RE+ 
Sbjct: 191 LESRVQEVIEFINAQSDTGCVVGIWGMGGLGKTTMAKVIYNKIHRRFRHSSFIENIREVC 250

Query: 60  -SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLG--SRLQRKKVLLVIDDVVDVKQL 116
            +   G   LQ+QL+S +L        N+  G+ ++G   +L  ++ L+V+DDV DVKQL
Sbjct: 251 ENDSRGCFFLQQQLVSDIL--------NIRVGMGIIGIEKKLFGRRPLIVLDDVTDVKQL 302

Query: 117 QSLAGNREWFGSGSRIIITSRDEHLL---KTHGVDEVYKPHGLNYDEALQLFNMKAFKTY 173
           ++L+ NREW G+G   IIT+RD  LL   K +    V +   ++ +E+L+LF+  AF+  
Sbjct: 303 KALSLNREWTGTGCVFIITTRDVRLLNVLKPYHRVHVCRIKEMDENESLELFSWHAFRQA 362

Query: 174 QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
            P ++ ++LS  I+ Y GGLPLALEVLGS+L  R+ +EW S L +L   P  ++ + L+I
Sbjct: 363 HPREDLIKLSMDIVAYCGGLPLALEVLGSYLCERTKEEWESVLAKLRKIPNDQVQEKLRI 422

Query: 234 SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTL 292
           S+D L   EK IFLDI  FF G DR  VT  L+GC  H  IGI +L+E+ LI +  NN +
Sbjct: 423 SYDDLDCEEKNIFLDICFFFIGKDRVNVTEILKGCDLHAEIGITILVERSLIKLEKNNKI 482

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            MH+LL+++G++IV++ S EE  KRSRLW  +EV  +L E TGT+ +EG+ L     +  
Sbjct: 483 KMHNLLRDMGREIVRQSSLEEPEKRSRLWVHQEVLDLLLEHTGTKAIEGLAL---KLQRT 539

Query: 353 VYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
             L  + KAF KM  LRLL++ ++QL    EYL+  LR L  +G+PL+ +P NL  +  I
Sbjct: 540 SGLHFNTKAFEKMKKLRLLQLDHVQLVGDYEYLNKNLRWLCLQGFPLQHIPENLYQENLI 599

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
            I + YS I  +WK  + L +LK++ LSHS NL+  PDF+  PNL KL L+ C RL E+H
Sbjct: 600 SIELKYSNIRLVWKEPQLLQRLKILNLSHSRNLMHTPDFSKLPNLAKLNLKDCPRLSEVH 659

Query: 473 PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
            S+   N L+++N+ DCTSL  LP +I                   LK L TL  SG  K
Sbjct: 660 QSIGDLNNLLVINLMDCTSLSNLPRRIYQ-----------------LKSLQTLIFSGCSK 702

Query: 533 FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL 574
                E +  ME L+ L  + TA++ +P SI  L  +V ++L
Sbjct: 703 IDMLEEDIVQMESLTTLIAKDTAVKEMPQSIVRLKNIVYISL 744



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 179/473 (37%), Gaps = 71/473 (15%)

Query: 542  HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
            + E+L  + L+ + IR +    +LL  L +LNL + R+L   P   S L  L  L L  C
Sbjct: 594  YQENLISIELKYSNIRLVWKEPQLLQRLKILNLSHSRNLMHTP-DFSKLPNLAKLNLKDC 652

Query: 602  SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
             +L                        EV  SI  L  L ++NL DC +L  LP  I  L
Sbjct: 653  PRLS-----------------------EVHQSIGDLNNLLVINLMDCTSLSNLPRRIYQL 689

Query: 662  KSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYS---YIPINLMRK 715
            KSL+TL  SGC K++ + E + Q+ESL  L    TAV   P S        YI +  +  
Sbjct: 690  KSLQTLIFSGCSKIDMLEEDIVQMESLTTLIAKDTAVKEMPQSIVRLKNIVYISLCGLEG 749

Query: 716  SVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHL 775
                  PSL         NL  C    G++ +      SL  + +  N+   +   +  L
Sbjct: 750  LARDVFPSLIWSWMSPTANLRSCTHSFGSMST------SLTSMDIHHNNLGDMLPMLVRL 803

Query: 776  SKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKL 835
            SKL +I L  C    S  QL   + +V  + C    T L+     +S  +  A    L  
Sbjct: 804  SKLRSI-LVQC---DSKFQLTQKLSKVMDDLCQVKFTELERTSY-ESQISENAMESYLIG 858

Query: 836  LGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKK 895
            +G      +ML + +     T       +PG   P W     +G S+    P +  +   
Sbjct: 859  MGRYDQVINMLSKSISEGLRTNDSSDFPLPGDNYPYWLACIGQGHSVHFQLPVD--SDCC 916

Query: 896  LVGYAICCVFHVLKNSRGNNCF-GSYPTHQLNC--HIGHGIYGIGFRDKFGQAGSDHLWL 952
            + G  +C V+     +    C  G    +   C  HI      I F D+  Q        
Sbjct: 917  IKGMTLCVVYSSTTKNMAEECLTGVSIVNYTKCTIHIYKRDTIISFNDEDWQG------- 969

Query: 953  LYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDE 1005
                          + SNL P +    NV     LG GL V    L+ +Y DE
Sbjct: 970  --------------VISNLRPSD----NVEIFVVLGHGLTVVKTALYLIYDDE 1004


>gi|357449963|ref|XP_003595258.1| Heat shock protein [Medicago truncatula]
 gi|355484306|gb|AES65509.1| Heat shock protein [Medicago truncatula]
          Length = 1558

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 252/644 (39%), Positives = 371/644 (57%), Gaps = 39/644 (6%)

Query: 11  LMDSGSSD-VRMIGICGMGGLGKTTIARVVYD-LISHEFEASGFLDNVREISSKGGLVSL 68
           L+  GS +   M+GI G GG+GK+T+AR VY+  +S +F+   FL ++RE + K GLV L
Sbjct: 204 LLGIGSDEGANMVGIYGTGGVGKSTLARAVYNNQLSDQFDGVCFLADIRESTIKHGLVQL 263

Query: 69  QRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGS 128
           Q  LLS++L   D  + NV  GI ++  RLQ KKVLLV+DD+   KQ+Q LAG  +WFGS
Sbjct: 264 QETLLSEILCEKDIRVGNVNRGISIIKRRLQSKKVLLVLDDIDKAKQIQVLAGGHDWFGS 323

Query: 129 GSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV-QLSARII 187
           GS+IIIT+RD+HLL  +G+  +Y+   LN  ++L+LFN  AFK    +  C   +S R +
Sbjct: 324 GSKIIITTRDKHLLAINGILSLYEVKQLNNKKSLELFNWYAFKN-NNVDPCYGDISKRAV 382

Query: 188 RYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFL 247
            YAGGLPLALEV+GS L GRS+  W+  L++ E  P  +I + L++S++ L E +K IFL
Sbjct: 383 SYAGGLPLALEVIGSHLCGRSLCAWKDALDKYEEIPHEDIHETLKVSYNDLDEKDKGIFL 442

Query: 248 DIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQELGQQIV 306
           DIACFF   +  YV   L   GF    GI VL +K L+ + +   + MHDL+Q++G++IV
Sbjct: 443 DIACFFNSYEMSYVKEMLYLHGFKAENGIEVLTDKSLMKIDDGGCVRMHDLVQDMGREIV 502

Query: 307 QRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMT 366
           +++S  E GKRSRLW  +++ HVL E+TGT+ +E I++ N  ++ EV    S KAF KM 
Sbjct: 503 RQESTLEPGKRSRLWFHDDIIHVLEENTGTDTIEVIII-NLCNDKEVRW--SGKAFKKMK 559

Query: 367 NLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWK 426
           NL++L I + +     + L N LR+L W GYP + LPS+    K + I   +      +K
Sbjct: 560 NLKILIIRSARFSKDPQKLPNSLRVLDWSGYPSQSLPSDFN-PKNLMILSLHESCLISFK 618

Query: 427 GIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNM 486
            IK  + L  +     + L  +P  +G  NL  L L+ CT L  IH S+   NKL++L+ 
Sbjct: 619 PIKAFESLSFLDFDGCKLLTELPSLSGLVNLWALCLDDCTNLITIHNSVGFLNKLVLLST 678

Query: 487 KDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHL 546
           + CT L  L   I + SLE                  TLD+ G  + + FPE++  M+++
Sbjct: 679 QRCTQLELLVPTINLPSLE------------------TLDMRGCSRLKSFPEVLGVMKNI 720

Query: 547 SELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKL-- 604
            +++L+ T+I  LP SI+ L GL  L L+ C SL  LP ++  L  L      GC     
Sbjct: 721 RDVYLDQTSIDKLPFSIQKLVGLRRLFLRECLSLTQLPDSIRTLPKLEITMAYGCRGFQL 780

Query: 605 ---------KKFPEIVRSMKDLSELFLDGTSIKEVP-SSIELLT 638
                    K FP  +   K+ S   LD +S+   P ++IE+ +
Sbjct: 781 FEDKEKVGSKMFPNAMLVYKEGSPELLDMSSLNICPDNAIEVFS 824



 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 104/191 (54%), Gaps = 6/191 (3%)

Query: 496 PGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-T 554
           P  +++ SL +  L S    I   + LS LD  G     E P +   + +L  L L+  T
Sbjct: 601 PKNLMILSLHESCLISF-KPIKAFESLSFLDFDGCKLLTELPSL-SGLVNLWALCLDDCT 658

Query: 555 AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
            +  +  S+  L+ LVLL+ + C  LE+L  T+ NL  L +L + GCS+LK FPE++  M
Sbjct: 659 NLITIHNSVGFLNKLVLLSTQRCTQLELLVPTI-NLPSLETLDMRGCSRLKSFPEVLGVM 717

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC-- 672
           K++ +++LD TSI ++P SI+ L  L  L L +C +L +LP SI  L  L+     GC  
Sbjct: 718 KNIRDVYLDQTSIDKLPFSIQKLVGLRRLFLRECLSLTQLPDSIRTLPKLEITMAYGCRG 777

Query: 673 FKLENVPETLG 683
           F+L    E +G
Sbjct: 778 FQLFEDKEKVG 788



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 125/307 (40%), Gaps = 66/307 (21%)

Query: 587 VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNL 645
           +   + L  L   GC  L + P +   + +L  L LD  T++  + +S+  L KL LL+ 
Sbjct: 620 IKAFESLSFLDFDGCKLLTELPSL-SGLVNLWALCLDDCTNLITIHNSVGFLNKLVLLST 678

Query: 646 SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWY 705
             C  L  L    I L SL+TL++ GC +L++ PE LG ++++ ++ +  T++       
Sbjct: 679 QRCTQL-ELLVPTINLPSLETLDMRGCSRLKSFPEVLGVMKNIRDVYLDQTSID------ 731

Query: 706 SYIPINLMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNS 764
                         KLP S+  L  LR+L L +C                         S
Sbjct: 732 --------------KLPFSIQKLVGLRRLFLREC------------------------LS 753

Query: 765 FVSLPTSITHLSKLLNIELEDCKRLQSL-------PQLPPNIRQVRVNGCASLVTLLDAL 817
              LP SI  L KL       C+  Q          ++ PN   V   G   L+  + +L
Sbjct: 754 LTQLPDSIRTLPKLEITMAYGCRGFQLFEDKEKVGSKMFPNAMLVYKEGSPELLD-MSSL 812

Query: 818 KLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQN 877
            +C  ++  +    +L +    ++ F M +  LE   N  QH S     S +  WF  QN
Sbjct: 813 NICPDNAIEVFSTSTLGI----NVDF-MSKGILEGRGNWYQHES---DKSSLRFWF--QN 862

Query: 878 EGSSITV 884
           +   IT+
Sbjct: 863 KFPRITL 869


>gi|224145028|ref|XP_002325500.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862375|gb|EEE99881.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 709

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 242/579 (41%), Positives = 351/579 (60%), Gaps = 31/579 (5%)

Query: 27  MGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK-GGLVSLQRQLLSQLLKLADNSIW 85
           MGG+GKTTIA  V++ IS ++E+  F+ NVRE S + GGL+ L+ + LS++L+  +  I 
Sbjct: 1   MGGIGKTTIAEAVFNSISSQYESCCFITNVREKSEECGGLIRLREEFLSRVLEQENLRID 60

Query: 86  NVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTH 145
               G  ++  R++ KKV  V+DDV DV+Q++ L    + FG GSRI++TSRD  +LK +
Sbjct: 61  TPRMGSTLIKERIRHKKVFTVLDDVSDVEQVECLIERHDMFGPGSRILVTSRDRQVLK-N 119

Query: 146 GVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLS 205
             DE+Y+   LN  EA QLF++  FK     ++   LS R + YA G PLAL+VLGSFL 
Sbjct: 120 VADEIYEVEELNCSEARQLFSLSVFKGNHIPKDYKGLSIRAVNYAKGNPLALKVLGSFLF 179

Query: 206 GRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFL 265
            +  ++W + L +LE  P  +I ++L++SFD L + EK IFLDIACFFKG   DYV   L
Sbjct: 180 DQRKEDWENALNKLERNPQLKIYNMLKVSFDALGDEEKNIFLDIACFFKGKQIDYVKRIL 239

Query: 266 EGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEE 325
           +GCGF   IG+  L E+CLIT+ N  L MHDLLQE+  +IV+++S +ELGKRSRLW   +
Sbjct: 240 DGCGFSTNIGVFFLAERCLITISNGKLEMHDLLQEMAFEIVRQESIKELGKRSRLWSPRD 299

Query: 326 VCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI--------CNLQ 377
           V  VLT++ GTE VEGI  D    + E+ L  S+KAF++M NLRLLKI        C + 
Sbjct: 300 VNQVLTKNLGTEKVEGIFFDTSKIK-EIKL--SSKAFARMYNLRLLKIYNSEVGKNCKVY 356

Query: 378 LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVM 437
           LP+GL+ LS+ LR L W GYPLK LPSN   +  +E+ + +S++ ELWKG    D++   
Sbjct: 357 LPHGLKSLSDELRYLHWDGYPLKSLPSNFHPENLVELNLSHSKVRELWKG----DQVWFS 412

Query: 438 ILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPG 497
             +++    R+   +    +  L L GC+ L +++P    H  ++ LN  + T++  LP 
Sbjct: 413 QYTYAAQAFRVFQESLNRKISALNLSGCSNL-KMYPETTEH--VMYLNFNE-TAIKELPQ 468

Query: 498 KILMKS-LEKLNLK------SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELH 550
            I  +S L  LNL+      +LP +I  LK +  +DVSG     +FP I  +  +   L+
Sbjct: 469 SIGHRSRLVALNLRECKQLGNLPESICLLKSIVIVDVSGCSNVTKFPNIPGNTRY---LY 525

Query: 551 LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSN 589
           L GTA+   P S+  LS +  L+L N   L+ LP   S+
Sbjct: 526 LSGTAVEEFPSSVGHLSRISSLDLSNSGRLKNLPTEFSS 564



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 81/135 (60%), Gaps = 6/135 (4%)

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
           +S L++SG    + +PE  EH+ +L   +   TAI+ LP SI   S LV LNL+ C+ L 
Sbjct: 432 ISALNLSGCSNLKMYPETTEHVMYL---NFNETAIKELPQSIGHRSRLVALNLRECKQLG 488

Query: 582 ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLE 641
            LP ++  LK +  + +SGCS + KFP I  + +    L+L GT+++E PSS+  L+++ 
Sbjct: 489 NLPESICLLKSIVIVDVSGCSNVTKFPNIPGNTR---YLYLSGTAVEEFPSSVGHLSRIS 545

Query: 642 LLNLSDCKNLVRLPS 656
            L+LS+   L  LP+
Sbjct: 546 SLDLSNSGRLKNLPT 560



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 542 HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL-KCLRSLKLSG 600
           H E+L EL+L  + +R      EL  G  +   +   + +   V   +L + + +L LSG
Sbjct: 386 HPENLVELNLSHSKVR------ELWKGDQVWFSQYTYAAQAFRVFQESLNRKISALNLSG 439

Query: 601 CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           CS LK +PE    +  L+    + T+IKE+P SI   ++L  LNL +CK L  LP SI  
Sbjct: 440 CSNLKMYPETTEHVMYLN---FNETAIKELPQSIGHRSRLVALNLRECKQLGNLPESICL 496

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
           LKS+  +++SGC  +   P   G    L    +SGTAV
Sbjct: 497 LKSIVIVDVSGCSNVTKFPNIPGNTRYLY---LSGTAV 531



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 39/216 (18%)

Query: 620 LFLDGTSIKEVPSSIELLTKLELLNL---------SDCKNLVRLPSSIIALKS-LKTLNL 669
           +F D + IKE+  S +   ++  L L          +CK  V LP  + +L   L+ L+ 
Sbjct: 316 IFFDTSKIKEIKLSSKAFARMYNLRLLKIYNSEVGKNCK--VYLPHGLKSLSDELRYLHW 373

Query: 670 SGCFKLENVPETLGQIESLEELDIS---------GTAVPHSTSWYSYIPINLMRKSVALK 720
            G + L+++P      E+L EL++S         G  V  S   Y+     + ++S+  K
Sbjct: 374 DG-YPLKSLPSNF-HPENLVELNLSHSKVRELWKGDQVWFSQYTYAAQAFRVFQESLNRK 431

Query: 721 LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLN 780
           + +L         NL+ C+ ++   P    ++  L     ++ +   LP SI H S+L+ 
Sbjct: 432 ISAL---------NLSGCSNLK-MYPETTEHVMYLN---FNETAIKELPQSIGHRSRLVA 478

Query: 781 IELEDCKRLQSLPQ---LPPNIRQVRVNGCASLVTL 813
           + L +CK+L +LP+   L  +I  V V+GC+++   
Sbjct: 479 LNLRECKQLGNLPESICLLKSIVIVDVSGCSNVTKF 514


>gi|356542395|ref|XP_003539652.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1396

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 266/697 (38%), Positives = 390/697 (55%), Gaps = 48/697 (6%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +DSR   ++ ++   S D V ++ I G GG+GKTT A  +Y+ I HEFEA+ FL NVRE 
Sbjct: 194 LDSRFLDVKSMIHIESHDTVLILEIYGAGGIGKTTFALDIYNNIRHEFEAASFLANVREK 253

Query: 60  SSKG--GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
           S+K   GL  LQ+ LLS++ +  +        G   +  RL  KKVLLV+DDV   KQL+
Sbjct: 254 SNKSTEGLEDLQKTLLSEMGEETE------IIGASEIKRRLGHKKVLLVLDDVDSTKQLE 307

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEV----YKPHGLNYDEALQLFNMKAFKTY 173
           SL G  +WFGS SRIIIT+RD  LL  H +D+V    Y+   LNY ++L+LF   AF   
Sbjct: 308 SLVGGGDWFGSRSRIIITTRDTTLLDEHVIDDVVIETYEMKALNYGDSLELFCWHAFNMS 367

Query: 174 QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
           +P +    +S   +RYA G PLAL+V+GS L G S+ +W   LE+ ++ P ++I ++L+I
Sbjct: 368 KPAENFEGVSNDAVRYAKGHPLALKVIGSNLKGGSLKDWEMELEKYKMIPNAKIQEVLEI 427

Query: 234 SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTL 292
           S+  L  L++KIFLDIACFFKG  R YV   L+ C F P IG  V   KCLIT+  +  L
Sbjct: 428 SYHSLDVLDQKIFLDIACFFKGERRGYVERILKACDFCPSIG--VFTAKCLITIDEDGCL 485

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            MHDL+Q++G++IV+++S    G RSRLW  EEV  VL E++G+  +EGI+LD   HE  
Sbjct: 486 DMHDLIQDMGREIVRKESSINAGDRSRLWSHEEVLRVLIENSGSNRIEGIMLDPPSHEKV 545

Query: 353 VYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
                +  AF KM NLR+L I N        YL N LRLL W+GYP K  P +    K +
Sbjct: 546 DDRIDT--AFEKMENLRILIIRNTTFSTAPSYLPNTLRLLEWKGYPSKSFPPDFYPTKIV 603

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
           +  + +S +  L K  K  + L  + LS  +++ R+PD +GA NL+ L L+ C +L    
Sbjct: 604 DFKLNHSSL-MLEKSFKKYEGLTFINLSQCQSITRIPDVSGAINLKVLTLDKCRKLKGFD 662

Query: 473 PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
            S+     L+ ++   C  L     K  + S+      SLP+       L  L  S   +
Sbjct: 663 KSIGFMRNLVYVSALRCNML-----KSFVPSM------SLPS-------LEVLSFSFCSR 704

Query: 533 FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKC 592
              FP+++E M+   ++ L  TAI+  P+SI  L+GL  L++  C+ L I    +  L  
Sbjct: 705 LEHFPDVMEEMDRPLKIQLVNTAIKEFPMSIGKLTGLEYLDISGCKKLNI-SRKLFLLPK 763

Query: 593 LRSLKLSGCSKL----KKFPE---IVRSMKDLSELFLDGTSI--KEVPSSIELLTKLELL 643
           L +L + GCS +    K+F E   +     +L  L L  T++  +E+ + ++   +LE L
Sbjct: 764 LETLLVDGCSHIGQSFKRFKERHSMANGCPNLRTLHLSETNLSNEELYAILKGFPRLEAL 823

Query: 644 NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
            +S   +   LP  I   K LK+L++S C  L ++PE
Sbjct: 824 KVS-YNDFHSLPECIKDSKQLKSLDVSYCKNLSSIPE 859


>gi|357457201|ref|XP_003598881.1| TMV resistance protein N [Medicago truncatula]
 gi|355487929|gb|AES69132.1| TMV resistance protein N [Medicago truncatula]
          Length = 1270

 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 229/577 (39%), Positives = 347/577 (60%), Gaps = 24/577 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           ++SR +++   +++ SS V  +GI GMGGLGKTT A+ +Y+ I  +F    F++N+R+  
Sbjct: 313 LESRVDQVMLSIENQSSKVSAVGIWGMGGLGKTTTAKGIYNKIHRKFVHRSFIENIRQTC 372

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            S  G + LQ+QLLS L K  +  I N+  G   +  RL  KKVL+V+DDV  V+Q+++L
Sbjct: 373 ESDKGYIRLQQQLLSDLFKTKEK-IHNIASGTITINKRLSAKKVLIVLDDVTKVQQVKAL 431

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            GN +  G GS +I+T+RD H+L++  VD V     ++ +E+L+LF+  AF+   P    
Sbjct: 432 CGNYKCLGLGSVLIVTTRDAHVLRSLEVDCVCTAKEMDENESLELFSWHAFRNATPRANF 491

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             LS  ++ Y GGLPLA+EVLGS+L  R+ +EW+S L +LE  P  E+ + L+IS+DGL 
Sbjct: 492 SDLSKNVVNYCGGLPLAVEVLGSYLFERTKEEWKSVLSKLEKIPHEEVQEKLKISYDGLT 551

Query: 240 ELEKK-IFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDL 297
           +  KK IFLD+ CFF G DRDYVT  L GCG    IGI VLIE+ L+ V  NN L MHDL
Sbjct: 552 DDTKKAIFLDVCCFFIGKDRDYVTEILNGCGLFAGIGIAVLIERSLLKVEKNNKLGMHDL 611

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           ++++G++IV+  S  + G+RSRLW  E+   VLT++TGT+ VEG++L+      + +   
Sbjct: 612 IRDMGREIVRGSSTNDPGERSRLWLHEDAHSVLTKNTGTQKVEGLILNLQSKGRDSF--- 668

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
           S   F +M N+RLL++  + L     +LS +LR + W+      +P +      + + + 
Sbjct: 669 STNVFQQMQNMRLLQLDCVDLTGEFAHLSKQLRWVNWQRSTFNCIPKDFYQGNLVVLELK 728

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
           +S + ++WK  K LDKLK++ LSHS+ L   PDF+  PNLEKLI++ C  L EIHPS+ +
Sbjct: 729 FSNVKQVWKETKLLDKLKILNLSHSKYLKSTPDFSKLPNLEKLIMKDCPSLSEIHPSIGV 788

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
             KL+++N+KDCTSL  LP +I                   L  + TL + G  K  +  
Sbjct: 789 LKKLLLINLKDCTSLGNLPREIYQ-----------------LISVKTLILFGCSKIDKLE 831

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL 574
           E +  M+ L+ L    T ++  P SI     +V ++L
Sbjct: 832 EDIVQMKSLTTLVAANTGVKQAPFSIVRSKSIVYISL 868



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 134/318 (42%), Gaps = 48/318 (15%)

Query: 590  LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDC 648
            L  L+ L LS    LK  P+  + + +L +L + D  S+ E+  SI +L KL L+NL DC
Sbjct: 742  LDKLKILNLSHSKYLKSTPDFSK-LPNLEKLIMKDCPSLSEIHPSIGVLKKLLLINLKDC 800

Query: 649  KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI 708
             +L  LP  I  L S+KTL L GC K++ + E + Q++SL  L  + T V  +       
Sbjct: 801  TSLGNLPREIYQLISVKTLILFGCSKIDKLEEDIVQMKSLTTLVAANTGVKQA------- 853

Query: 709  PINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSL 768
            P +++R    + +     LC    L+           PS I +  S      + N    +
Sbjct: 854  PFSIVRSKSIVYI----SLCGYEGLS-------RDIFPSLIWSWMS-----PTMNPLPYI 897

Query: 769  P-TSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDAL---------- 817
            P TS+   S  L +  +   R           R VRV  C S++ L+  L          
Sbjct: 898  PLTSLDVESNNLVLGYQSSMRSSCSEH-----RSVRVE-CQSVIQLIQKLTSFLDGLYGA 951

Query: 818  KLCKSDSTMIACLDSLKL------LGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPE 871
             L +S+++  + +  + L      +G+  +    L + L     T       +PG   P 
Sbjct: 952  NLTESETSHASKISDISLKSLLITMGSCHIVVDTLGKSLSQGLTTNDSSDSFLPGDNYPS 1011

Query: 872  WFMYQNEGSSITVTRPSN 889
            W  Y NEG S+    P +
Sbjct: 1012 WLAYTNEGPSVRFEVPED 1029


>gi|105923326|gb|ABF81471.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
          Length = 1368

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 263/678 (38%), Positives = 377/678 (55%), Gaps = 41/678 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D    ++R  + +G+  V ++GI GM G+GKTTIA+ V+D +  EFE S FL NV+E S
Sbjct: 300 IDPLVNEIRDFVSNGTEKVCIVGIHGMPGIGKTTIAKEVFDKLCDEFEGSSFLLNVKEKS 359

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
               +V LQ+QLL  +L+     I NV  G  ++  RL  K+VL+V+DDV    QL  L 
Sbjct: 360 ESKDMVLLQKQLLHDILRQNTEKINNVDRGKVLIKERLPHKRVLVVVDDVARPDQLLDLM 419

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G   W G GSR+IIT+RDE LL     D+ Y+   LN D +LQLF   AF+  +P ++ V
Sbjct: 420 GEPSWLGPGSRVIITTRDESLLLE--ADQRYQVQELNRDNSLQLFCRHAFRDTKPAKDYV 477

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS  ++ Y GGLPLAL+VLGS L G++   W S ++RL   P SEI   L+ISFD L E
Sbjct: 478 ELSNDVVEYCGGLPLALKVLGSCLYGKNQARWESVIDRLRKFPNSEIQKKLRISFDTLDE 537

Query: 241 LE-KKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNN-TLWMHDL 297
              K  FLDIACFF G  ++YV   LEG  G++P      LIE+ LI V ++ T+ MHDL
Sbjct: 538 STLKNTFLDIACFFIGRKKEYVAKVLEGRYGYNPEDDFGTLIERSLIKVDDSGTIGMHDL 597

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           L+ +G++IV+ +SPE   +RSR+W +E+   VL    GTE+V+G+ LD    E++     
Sbjct: 598 LRGMGREIVKEESPENPAQRSRIWSQEDAWIVLKMQMGTEVVKGLTLDVRRSEDK---SL 654

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
           S  +F+KM  L+LL+I  ++L    E LS  L  + W   PL+FLPS+  +D  + I M 
Sbjct: 655 STGSFTKMKLLKLLQINGVELTGSFERLSKVLTWICWLECPLEFLPSDFTLDYLVVIDMR 714

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
           YS I ELWK  K L+KLK++ LS+S+NL++ P+     NLEKL+LEGC+ L EIH  +  
Sbjct: 715 YSNIRELWKEKKILNKLKILDLSYSKNLVKTPNMHSL-NLEKLLLEGCSSLVEIHQCIGH 773

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
              L+ LN+  C+                  L+ LP  +  ++C + L   G +   +F 
Sbjct: 774 SKSLVSLNISGCS-----------------QLQKLPECMGDIECFTELLADG-INNEQFL 815

Query: 538 EIVEHMEHLSELHLEG--TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
             VEH+  + +L L G       LP      S  +   L        L  T +  + L  
Sbjct: 816 SSVEHLRCVRKLSLRGHWDWNWNLPYWPSPNSSWIPAFL--------LTPTSTIWRLLGK 867

Query: 596 LKLS-GCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRL 654
           LKL  G S+          +  L EL L G +   +PS I +L+KL LL + +C+NLV +
Sbjct: 868 LKLGYGLSERATNSVDFGGLSSLEELDLSGNNFFSLPSGIGILSKLRLLTVQECRNLVSI 927

Query: 655 PSSIIALKSLKTLNLSGC 672
           P       +L+ L+  GC
Sbjct: 928 PE---LPSNLEHLDAFGC 942



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 142/325 (43%), Gaps = 77/325 (23%)

Query: 625  TSIKEVPSSIELLTKLELLNLSDCKNLVRLP---------------SSIIAL-------K 662
            ++I+E+    ++L KL++L+LS  KNLV+ P               SS++ +       K
Sbjct: 716  SNIRELWKEKKILNKLKILDLSYSKNLVKTPNMHSLNLEKLLLEGCSSLVEIHQCIGHSK 775

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISG-------TAVPH-----------STSW 704
            SL +LN+SGC +L+ +PE +G IE   EL   G       ++V H              W
Sbjct: 776  SLVSLNISGCSQLQKLPECMGDIECFTELLADGINNEQFLSSVEHLRCVRKLSLRGHWDW 835

Query: 705  YSYIPI----NLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPS-DIGNLCSLKELY 759
               +P     N       L  P+ +    L KL L    L E A  S D G L SL+EL 
Sbjct: 836  NWNLPYWPSPNSSWIPAFLLTPTSTIWRLLGKLKLG-YGLSERATNSVDFGGLSSLEELD 894

Query: 760  LSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKL 819
            LS N+F SLP+ I  LSKL  + +++C+ L S+P+LP N+  +   GC S+        L
Sbjct: 895  LSGNNFFSLPSGIGILSKLRLLTVQECRNLVSIPELPSNLEHLDAFGCQSM-----QWAL 949

Query: 820  CKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEG 879
            C              +L N    FS   ++                 + IP WF Y  +G
Sbjct: 950  CYGGY-------GYHILFNHCYTFSHRDKF-----------------TMIPNWFSYSGKG 985

Query: 880  SSITVTRPSNLYNKKKLVGYAICCV 904
            +S++   P     +  +VG A  C+
Sbjct: 986  TSLSFHIPPVF--QGLVVGVACQCL 1008


>gi|147799277|emb|CAN74723.1| hypothetical protein VITISV_014048 [Vitis vinifera]
          Length = 1448

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 252/605 (41%), Positives = 374/605 (61%), Gaps = 32/605 (5%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EKL+ LM++  + V ++GI G+GG+GKTTIA+ +Y+ ISH+++ + FL N++E  SKG +
Sbjct: 198 EKLKSLMNTELNMVSVVGIYGIGGVGKTTIAKAIYNEISHQYDGNSFLINIKE-RSKGDI 256

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
           + LQ++LL  LL+     I NV +GI M+   L   +VL++ DDV ++KQL+ LA  ++W
Sbjct: 257 LQLQQELLHGLLRGNFFKINNVDEGISMIKRCLSSNRVLVIFDDVDELKQLEYLAEEKDW 316

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSAR 185
           F + S IIITSRD+H+L  +G D  Y+   LN +EA++LF++ AFK  +P +    LS  
Sbjct: 317 FRAKSTIIITSRDKHVLAQYGADIRYEVSKLNKEEAIELFSLWAFKQNRPQEVYKNLSYN 376

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           II YA GLPLAL+VLG+ L G+ +  W S L +L+I P  EI ++L+ISFDGL +++K I
Sbjct: 377 IIDYANGLPLALKVLGASLFGKKISNWESALCKLKIMPHMEIHNVLRISFDGLDDIDKGI 436

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQI 305
           FLD+ACFFKG+DRD+V+  L   G H    I  L ++CLITV  N L MHDL+Q++G +I
Sbjct: 437 FLDVACFFKGDDRDFVSRIL---GPHAEHAITTLDDRCLITVSKNMLDMHDLIQQMGWEI 493

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKM 365
           ++++ P++LG+RSRLW +    HVL  ++GT+ +EG+ LD     N   L  + ++F +M
Sbjct: 494 IRQECPKDLGRRSRLW-DYNAYHVLIRNSGTKAIEGLFLDRCKF-NPSQL--TTESFKEM 549

Query: 366 TNLRLLKICNLQ--------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
             LRLLKI N +        LP   E+ S  L  L W GYPL+ LP N      +E+ + 
Sbjct: 550 NRLRLLKIHNPRRKLFLEDHLPRDFEFSSYELTYLHWDGYPLESLPMNFHAKNLVELLLR 609

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
            S I +LW+G K  DKL+V+ LS+S +LIR+PDF+  PNLE L LE   R  EI  ++  
Sbjct: 610 NSNIKQLWRGNKLHDKLRVIDLSYSVHLIRIPDFSSVPNLEILTLE--ERFPEIKGNM-- 665

Query: 478 HNKLIILNMKDCTSLITLPGKIL-MKSLEKL------NLKSLPTTISGLKCLSTLDVSGD 530
             +L +L++   T+++ LP  I  +  L+ L       L  +P+ I  L  L  LD+ G 
Sbjct: 666 -RELRVLDLSG-TAIMDLPSSITHLNGLQTLLLEECSKLHKIPSHICHLSSLKVLDL-GH 722

Query: 531 LKFRE--FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS 588
               E   P  + H+  L +L+LE      +P +I  LS L +LNL +C +LE +P   S
Sbjct: 723 CNIMEGGIPSDICHLSSLQKLNLERGHFGSIPTTINQLSRLEILNLSHCSNLEQIPELPS 782

Query: 589 NLKCL 593
            L+ L
Sbjct: 783 RLRLL 787



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 130/355 (36%), Positives = 187/355 (52%), Gaps = 42/355 (11%)

Query: 551  LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI 610
             EG+ +  +P+ IE    L  L L+NC++L  LP ++   K L +L  SGCS+L+ FPEI
Sbjct: 1025 FEGSDMNEVPI-IENPLELDSLCLRNCKNLTSLPSSIFGFKSLATLSCSGCSQLESFPEI 1083

Query: 611  VRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLS 670
            ++ M+ L +L+LDGT+IKE+PSSI  L  L  L+L  CKNLV LP SI  L SLK L + 
Sbjct: 1084 LQDMESLRKLYLDGTTIKEIPSSISHLRGLHTLSLYQCKNLVNLPESICNLTSLKNLGVR 1143

Query: 671  GCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSL 730
             C      P+ LG++ SL+ L IS                     S+  +LPSLSGLCSL
Sbjct: 1144 RCPNFNKFPDNLGRLRSLKSLFISHL------------------DSMDFQLPSLSGLCSL 1185

Query: 731  RKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQ 790
            + L L  CNL E  +PS I  L SL  LYL +N F  +P  I+ L  L  ++L  CK LQ
Sbjct: 1186 KLLMLHACNLRE--IPSGIYYLSSLVLLYLGRNHFSRIPDGISQLYNLKLLDLSHCKMLQ 1243

Query: 791  SLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYL 850
             +P+LP ++  + V+ C SL  L     L    S++  C  S ++ G +   F ++R ++
Sbjct: 1244 HIPELPSSLMYLDVHNCTSLENLSSQSNLLW--SSLFKCFKS-QIQGRE---FGLVRTFI 1297

Query: 851  EAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
                              IPEW  +Q  G  IT+  P + Y     +G+ +C ++
Sbjct: 1298 ---------------AESIPEWISHQKSGFKITMKLPWSWYENDDFLGFVLCSLY 1337



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 160/297 (53%), Gaps = 25/297 (8%)

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
           K+L EL L  ++IK++    +L  KL +++LS   +L+R+P    ++ +L+ L L     
Sbjct: 601 KNLVELLLRNSNIKQLWRGNKLHDKLRVIDLSYSVHLIRIPD-FSSVPNLEILTLE---- 655

Query: 675 LENVPETLGQIESLEELDISGTAV---PHSTSWYSYIPINLMRKSVAL-KLPS-LSGLCS 729
            E  PE  G +  L  LD+SGTA+   P S +  + +   L+ +   L K+PS +  L S
Sbjct: 656 -ERFPEIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLEECSKLHKIPSHICHLSS 714

Query: 730 LRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRL 789
           L+ L+L  CN+MEG +PSDI +L SL++L L +  F S+PT+I  LS+L  + L  C  L
Sbjct: 715 LKVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFGSIPTTINQLSRLEILNLSHCSNL 774

Query: 790 QSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREY 849
           + +P+LP  +R +  +G   + +    L L     +++ C    ++L  KS +FS     
Sbjct: 775 EQIPELPSRLRLLDAHGSNRISSRAPFLPL----HSLVNCFSWARVL--KSTSFS----- 823

Query: 850 LEAVSNTRQHLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
               S   +   +V+PGS  IPEW M+      I+   P N +   + +G+AICCV+
Sbjct: 824 --DSSYHGKGTCIVLPGSAGIPEWIMHWRNRCFISTELPQNWHQNNEFLGFAICCVY 878



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 69/196 (35%), Positives = 103/196 (52%), Gaps = 23/196 (11%)

Query: 508  NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
            NL SLP++I G K L+TL  SG  +   FPEI++ ME L +L+L+GT I+ +P SI  L 
Sbjct: 1052 NLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLDGTTIKEIPSSISHLR 1111

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TS 626
            GL  L+L  C++L  LP ++ NL  L++L +  C    KFP+ +  ++ L  LF+    S
Sbjct: 1112 GLHTLSLYQCKNLVNLPESICNLTSLKNLGVRRCPNFNKFPDNLGRLRSLKSLFISHLDS 1171

Query: 627  IKEVPSSIELLTKLELLNLSDC----------------------KNLVRLPSSIIALKSL 664
            +     S+  L  L+LL L  C                       +  R+P  I  L +L
Sbjct: 1172 MDFQLPSLSGLCSLKLLMLHACNLREIPSGIYYLSSLVLLYLGRNHFSRIPDGISQLYNL 1231

Query: 665  KTLNLSGCFKLENVPE 680
            K L+LS C  L+++PE
Sbjct: 1232 KLLDLSHCKMLQHIPE 1247



 Score = 46.6 bits (109), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 107/254 (42%), Gaps = 36/254 (14%)

Query: 433  KLKVMILSHSENLIRMPD-FTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTS 491
            +L  + L + +NL  +P    G  +L  L   GC++L E  P +L   + +     D T+
Sbjct: 1041 ELDSLCLRNCKNLTSLPSSIFGFKSLATLSCSGCSQL-ESFPEILQDMESLRKLYLDGTT 1099

Query: 492  LITLPGKIL-MKSLEKL------NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHME 544
            +  +P  I  ++ L  L      NL +LP +I  L  L  L V     F +FP+ +  + 
Sbjct: 1100 IKEIPSSISHLRGLHTLSLYQCKNLVNLPESICNLTSLKNLGVRRCPNFNKFPDNLGRLR 1159

Query: 545  HLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKL 604
             L  L +  + +  +   +  LSGL  L L                     L L  C+ L
Sbjct: 1160 SLKSLFI--SHLDSMDFQLPSLSGLCSLKL---------------------LMLHACN-L 1195

Query: 605  KKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSL 664
            ++ P  +  +  L  L+L       +P  I  L  L+LL+LS CK L  +P       SL
Sbjct: 1196 REIPSGIYYLSSLVLLYLGRNHFSRIPDGISQLYNLKLLDLSHCKMLQHIPE---LPSSL 1252

Query: 665  KTLNLSGCFKLENV 678
              L++  C  LEN+
Sbjct: 1253 MYLDVHNCTSLENL 1266


>gi|357474811|ref|XP_003607691.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508746|gb|AES89888.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1050

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 238/590 (40%), Positives = 346/590 (58%), Gaps = 23/590 (3%)

Query: 11  LMDSGSSDVRMIGICGMGGLGKTTIARVVY--DLISHEFEASGFLDNVREISSKGGLVSL 68
           L+DS    V  +GICGM G+GKTT+A V+Y     S +F+A  F+D+V +     G V  
Sbjct: 200 LLDS-VDKVLAVGICGMSGVGKTTLASVLYCNKKNSPQFDACCFIDDVSKKFRYYGPVGA 258

Query: 69  QRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGS 128
           Q+Q+L Q L      I+N++D  +++ SRL R + L++ D+V D +QL+ LA  R+   +
Sbjct: 259 QKQILHQTLGEEHIQIYNMYDAANLIQSRLSRCRALIIFDNVDDSEQLEKLAVTRKSLAA 318

Query: 129 GSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQ-LSARII 187
           GSRIII  RD H+L+ +GVD +YK   LN   +LQLF  KAFK      +  + ++  ++
Sbjct: 319 GSRIIIVCRDAHILEEYGVDALYKVPFLNETNSLQLFCRKAFKCDNIKSDSYEEMTYDML 378

Query: 188 RYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFL 247
            YA GLPL ++VL SFL  RS+ EWRS L RL   P   I+D LQ  F GL++ E +IFL
Sbjct: 379 NYANGLPLVIKVLSSFLYNRSISEWRSALARLGESPNKNIMDALQFGFYGLEKTEFEIFL 438

Query: 248 DIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQELGQQIV 306
           DIACFF G +  +V N L  CGFHP IG+RVL++K LI + + N + MH + +ELG++IV
Sbjct: 439 DIACFFNGREEKFVKNVLNCCGFHPDIGLRVLVDKSLIRISDENKIEMHGVFEELGRRIV 498

Query: 307 QRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMT 366
           Q  S +   + S LW  +    V++E+     VE IVL+    + E  +    +A S M+
Sbjct: 499 QENSTKVARQWSILWLHKYCYDVMSENMEKN-VEAIVLNGNERDTEELM---VEALSNMS 554

Query: 367 NLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWK 426
            LRLL + +++    L+ LSN+LR + W GYP  +LPSN + ++ +E+ M  S I +LW+
Sbjct: 555 RLRLLILKDVKCLGRLDNLSNQLRYVAWNGYPFMYLPSNFRPNQLVELIMVDSSIKQLWE 614

Query: 427 GIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNM 486
           G K+L  L+ + LS+S NLI+M DF   PNLE+L LEGC +L E+   + L  KL+ LN+
Sbjct: 615 GKKNLPNLRTLDLSYSTNLIKMLDFGEVPNLERLNLEGCVKLVEMDLFICLPKKLVFLNL 674

Query: 487 KDCTSLITLPGKIL-MKSLEKLNLKSLPTTISGLK-----------CLSTLDVSGDLKFR 534
           K+C SLI++P  I  + SLE LNL      ++ L+           CL  +D+S      
Sbjct: 675 KNCRSLISIPNGISGLNSLEYLNLCGCSKALNNLRHLEWPSLASLCCLREVDISF-CNLS 733

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
             P  +E +  +   +L G     LP    LLS L  LNL++C  L  LP
Sbjct: 734 HLPGDIEDLSCVERFNLGGNKFVTLP-GFTLLSKLEYLNLEHCLMLTSLP 782



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 180/381 (47%), Gaps = 39/381 (10%)

Query: 640  LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP 699
            LE LNL  C  LV +   I   K L  LNL  C  L ++P  +  + SLE L++ G +  
Sbjct: 645  LERLNLEGCVKLVEMDLFICLPKKLVFLNLKNCRSLISIPNGISGLNSLEYLNLCGCSK- 703

Query: 700  HSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELY 759
                      +N +R    L+ PSL+ LC LR+++++ CNL    LP DI +L  ++   
Sbjct: 704  ---------ALNNLRH---LEWPSLASLCCLREVDISFCNL--SHLPGDIEDLSCVERFN 749

Query: 760  LSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKL 819
            L  N FV+LP   T LSKL  + LE C  L SLP+LP           ++ + + +  +L
Sbjct: 750  LGGNKFVTLP-GFTLLSKLEYLNLEHCLMLTSLPELPSPAAIKHDEYWSAGMYIFNCSEL 808

Query: 820  CKSDSTMIACLDSLKLLGNKSLAFSMLREYLEA---VSNTRQHLSVVVPGSEIPEWFMYQ 876
             ++++   +            L FS + +++ A    S + + + +V+PGSEIP WF  Q
Sbjct: 809  DENETKRCS-----------RLTFSWMLQFILANQESSASFRSIEIVIPGSEIPSWFNNQ 857

Query: 877  NEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGI 936
             E  SI +  PS +     ++G A C VF    +   +   G  P   L+ H G      
Sbjct: 858  REDGSICIN-PSLIMRDSNVIGIACCVVFSAAPHGLISTTNGQKPVLYLSFHRGDFELHF 916

Query: 937  GFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWL--GQGLEVK 994
                      S H+WL Y +R++ +DI   + +  +        +S E ++  G+GLEVK
Sbjct: 917  SILVNANPIISSHMWLTYFTRESFFDILKDIGNRADDC------ISMEAFIVDGEGLEVK 970

Query: 995  MCGLHPVYMDEVEELDQTTNQ 1015
             CG   V+  +++E +  T Q
Sbjct: 971  SCGYRWVFKQDLQEFNLITMQ 991



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 129/289 (44%), Gaps = 50/289 (17%)

Query: 426 KGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILN 485
           + + ++ +L+++IL   + L R+ + +    L  +   G   +Y   PS    N+L+ L 
Sbjct: 548 EALSNMSRLRLLILKDVKCLGRLDNLSN--QLRYVAWNGYPFMY--LPSNFRPNQLVELI 603

Query: 486 MKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGD---LKFREFPEIVEH 542
           M D +      GK           K+LP        L TLD+S     +K  +F E+   
Sbjct: 604 MVDSSIKQLWEGK-----------KNLPN-------LRTLDLSYSTNLIKMLDFGEV--- 642

Query: 543 MEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
             +L  L+LEG   +  + L I L   LV LNLKNCRSL  +P  +S L  L  L L GC
Sbjct: 643 -PNLERLNLEGCVKLVEMDLFICLPKKLVFLNLKNCRSLISIPNGISGLNSLEYLNLCGC 701

Query: 602 SKL------KKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           SK        ++P +  S+  L E+ +   ++  +P  IE L+ +E  NL   K  V LP
Sbjct: 702 SKALNNLRHLEWPSLA-SLCCLREVDISFCNLSHLPGDIEDLSCVERFNLGGNK-FVTLP 759

Query: 656 SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSW 704
              + L  L+ LNL  C  L ++PE             S  A+ H   W
Sbjct: 760 GFTL-LSKLEYLNLEHCLMLTSLPEL-----------PSPAAIKHDEYW 796


>gi|109676360|gb|ABG37662.1| NBS-LRR type disease resistance-like protein [Populus trichocarpa]
          Length = 1138

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 220/459 (47%), Positives = 295/459 (64%), Gaps = 23/459 (5%)

Query: 168 KAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEI 227
           KAFK  QP ++ V+LS +++ YA GLPLALEV+GSFL GRS+ EWR  + R+   P  +I
Sbjct: 2   KAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFLYGRSIPEWRGAINRMHEIPDCKI 61

Query: 228 LDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV 287
           +D+L+ISFDGL E ++KIFLDIACF KG  +D +T  L+ CGF+  IGI VLIE+ LI+V
Sbjct: 62  MDVLRISFDGLHESDQKIFLDIACFLKGFKKDRITRILDSCGFNAGIGIPVLIERSLISV 121

Query: 288 HNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNY 347
           + + +WMH+LLQ +G++IV+ + P+E GKRSRLW  E+V   L ++TG E +E I LD  
Sbjct: 122 YGDQVWMHNLLQIMGKEIVRCEDPKEPGKRSRLWTYEDVSLALMDNTGKEKIEAIFLDMP 181

Query: 348 HHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
             +   +   + KAFSKM+ LRLLKI N+QL  G E LS  LR L W  YP K LP+ LQ
Sbjct: 182 GIKEAQW---NMKAFSKMSRLRLLKIDNVQLSEGPEDLSKELRFLEWHSYPSKSLPAGLQ 238

Query: 408 MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
           +D  +E++M  S I +LW G K    LKV+ LS+S NL + PD TG PNL  LILEGCT 
Sbjct: 239 VDGLVELHMANSSIEQLWYGCKSAVNLKVINLSNSLNLSKTPDLTGIPNLSSLILEGCTS 298

Query: 468 LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDV 527
           L E+HPSL  H  L  +N+ +C S   LP  + M+SL+                + TLD 
Sbjct: 299 LSEVHPSLGRHKNLQYVNLVNCKSFRILPSNLEMESLK----------------VFTLD- 341

Query: 528 SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
            G  K  +FP+IV +M  L EL L+GT I  L  SI  L GL +L++ NC++LE +P ++
Sbjct: 342 -GCTKLEKFPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSI 400

Query: 588 SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS 626
             LK L+ L LSGCS+LK  PE +  ++ L E   DG S
Sbjct: 401 GCLKSLKKLDLSGCSELKNIPENLGKVESLEE--FDGLS 437



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/172 (45%), Positives = 114/172 (66%), Gaps = 3/172 (1%)

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSL 580
           L  +++S  L   + P++   + +LS L LEG T++  +  S+     L  +NL NC+S 
Sbjct: 265 LKVINLSNSLNLSKTPDLT-GIPNLSSLILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSF 323

Query: 581 EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
            ILP  +  ++ L+   L GC+KL+KFP+IV +M  L EL LDGT I E+ SSI  L  L
Sbjct: 324 RILPSNLE-MESLKVFTLDGCTKLEKFPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGL 382

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD 692
           E+L++++CKNL  +PSSI  LKSLK L+LSGC +L+N+PE LG++ESLEE D
Sbjct: 383 EVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKNIPENLGKVESLEEFD 434



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 115/208 (55%), Gaps = 11/208 (5%)

Query: 557 RGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKD 616
           + LP  +++  GLV L++ N  S+E L     +   L+ + LS    L K P++   + +
Sbjct: 231 KSLPAGLQV-DGLVELHMANS-SIEQLWYGCKSAVNLKVINLSNSLNLSKTPDLT-GIPN 287

Query: 617 LSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
           LS L L+G TS+ EV  S+     L+ +NL +CK+   LPS++  ++SLK   L GC KL
Sbjct: 288 LSSLILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSFRILPSNL-EMESLKVFTLDGCTKL 346

Query: 676 ENVPETLGQIESLEELDISGTAVPH-STSWYSYIPINLMRKSVALKLPSLSG----LCSL 730
           E  P+ +G +  L EL + GT +   S+S +  I + ++  +    L S+      L SL
Sbjct: 347 EKFPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLKSL 406

Query: 731 RKLNLTDCNLMEGALPSDIGNLCSLKEL 758
           +KL+L+ C+ ++  +P ++G + SL+E 
Sbjct: 407 KKLDLSGCSELKN-IPENLGKVESLEEF 433



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 119/263 (45%), Gaps = 48/263 (18%)

Query: 617 LSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
           L EL +  +SI+++    +    L+++NLS+  NL + P  +  + +L +L L GC  L 
Sbjct: 242 LVELHMANSSIEQLWYGCKSAVNLKVINLSNSLNLSKTPD-LTGIPNLSSLILEGCTSLS 300

Query: 677 NVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLT 736
            V  +LG+ ++L+ +++           +  +P NL  +S  LK+ +L G   L K    
Sbjct: 301 EVHPSLGRHKNLQYVNLVNCKS------FRILPSNLEMES--LKVFTLDGCTKLEKF--- 349

Query: 737 DCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ-- 794
                    P  +GN+  L EL L       L +SI HL  L  + + +CK L+S+P   
Sbjct: 350 ---------PDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSI 400

Query: 795 -LPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAV 853
               +++++ ++GC+ L  + + L   +S                         E  + +
Sbjct: 401 GCLKSLKKLDLSGCSELKNIPENLGKVES------------------------LEEFDGL 436

Query: 854 SNTRQHLSVVVPGSEIPEWFMYQ 876
           SN R    +  PG+EIP WF ++
Sbjct: 437 SNPRPGFGIAFPGNEIPGWFNHR 459


>gi|224127254|ref|XP_002329438.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870488|gb|EEF07619.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1162

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 349/1032 (33%), Positives = 499/1032 (48%), Gaps = 158/1032 (15%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +D R  K+  L++  S D R++GI GMGG+GKTTIA+VV D +   F+   F  N R+ S
Sbjct: 198  IDVRVSKVESLLNINSPDFRIVGIWGMGGIGKTTIAKVVCDKVRSRFDGI-FFGNFRQQS 256

Query: 61   SKGGLVSLQRQLLSQLL--KLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
                   LQR  LSQLL  ++ +  + +  D    + +RL R KV +V+DDV +   L+ 
Sbjct: 257  D------LQRSFLSQLLGQEILNRGLLSFRDI--FVRNRLCRIKVFIVMDDVDNSMALEE 308

Query: 119  ----LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
                L G    FG GS+++ITSRD+ +LK + VD+ YK  GLNY++A+QLF+ KA K   
Sbjct: 309  WRDLLDGRNSSFGPGSKVLITSRDKQVLK-NVVDQTYKVVGLNYEDAIQLFSSKALKNCT 367

Query: 175  PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
            P  +   L  +I R+  G PLAL+VLGS   G+S++EWRS L +L  +P  +I   L+IS
Sbjct: 368  PTIDQRDLIKQIARHVQGNPLALKVLGSSFYGKSIEEWRSALNKLAQDP--QIEKALRIS 425

Query: 235  FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGC-GFHPVIGIRVLIEKCLITVHNN--- 290
            +DGL   +K IFLDIA FF    +D  T  L+   G      I  LI+KCLIT  N    
Sbjct: 426  YDGLDSEQKSIFLDIAHFFIIWKQDKATRILDCVYGRSVKFDISTLIDKCLITTDNRLNS 485

Query: 291  -----TLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD 345
                  L MHDLL+E+   IV+ +S +  G+RSRL    +   VL E+ GT+ ++GI L+
Sbjct: 486  VDGNERLEMHDLLEEMAFNIVRAES-DFPGERSRLCHPPDFVQVLEENKGTQKIKGISLE 544

Query: 346  NYHHENEVYLCASAKAFSKMTNLRLLKI--------CNLQLP-NGLEYLSNRLRLLGWRG 396
                   ++L   +  F+ M  LR L            + LP  GLEYL N LR L W  
Sbjct: 545  VSMLSRHIHL--KSDTFAMMDGLRFLNFDHDGSSQEYKMHLPPTGLEYLPNELRYLRWDE 602

Query: 397  YPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPN 456
            +P K LP + + +  +E+ +  S++  LW G+K +  L+ + LS S  L  +PD + A N
Sbjct: 603  FPSKSLPPSFRAEHLVELRLPKSKLVRLWTGVKDVGNLRTIDLSESPYLTELPDLSMAKN 662

Query: 457  LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
            L  L L  C  L E+  SL   +KL  +++  C                  NL+S P   
Sbjct: 663  LVCLRLGRCPSLTEVPSSLQYLDKLEEIDLNRC-----------------YNLRSFPMLD 705

Query: 517  SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
            S  K L  L +   L     P I ++M  L    LE T+I+ +P S+             
Sbjct: 706  S--KVLRKLSIGLCLDLTTCPTISQNMVCL---RLEQTSIKEVPQSVT------------ 748

Query: 577  CRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIEL 636
                            L+ L L+GCSK+ KFPEI     D+ +L L GT IKE+PSSI+ 
Sbjct: 749  --------------GKLKVLDLNGCSKMTKFPEI---SGDIEQLRLSGT-IKEMPSSIQF 790

Query: 637  LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
            LT+LE+L++                        SGC KLE+ PE    +ESL  L +S T
Sbjct: 791  LTRLEMLDM------------------------SGCSKLESFPEITVPMESLRYLFLSKT 826

Query: 697  AVPH--STSWYSYIPINLMR-KSVALK-LPS-LSGLCSLRKLNLTDCNLMEGALPSDIGN 751
             +    S S+     +N +      LK LPS +  L  L +LNL+ C+ +E + P     
Sbjct: 827  GIKEIPSISFKHMTSLNTLNLDGTPLKELPSSIQFLTRLYELNLSGCSKLE-SFPEITVP 885

Query: 752  LCSLKELYLSKNSFVSLPTS-ITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
            + SL+ L LSK     +P+S I HL  L  + L D   +++LP+LP  +R++    CASL
Sbjct: 886  MKSLEVLNLSKTGIKEIPSSLIKHLISLRCLNL-DGTPIKALPELPSLLRKLTTRDCASL 944

Query: 811  VTLLDALKLCKSDSTMIACLDSLKL--LGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSE 868
             T +  +      S++   LD      L  K L   M  +           + +V+PGSE
Sbjct: 945  ETTISIINF----SSLWFGLDFTNCFKLDQKPLVAVMHLKIQSGEEIPDGSIQMVLPGSE 1000

Query: 869  IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNC----------FG 918
            IPEWF  +  GSS+T+  PSN +   +L G A C VF +   S+   C          F 
Sbjct: 1001 IPEWFGDKGVGSSLTIQLPSNCH---QLKGIAFCLVFLLPLPSQDMPCEVDDDSQVLVFF 1057

Query: 919  SYPTHQLNC-HIGHGIYGIGFRDKFG------QAGSDHLWLLYLSRQTCYDIRLPLESNL 971
             Y     N  H G+     G R +F          SDH+ L Y          L L  +L
Sbjct: 1058 DYHVKSKNGEHDGNDEVVFGSRLRFALLFSLKTCDSDHMILHY---------ELELVKHL 1108

Query: 972  EPFESNHVNVSF 983
              +  N V   F
Sbjct: 1109 RKYSGNEVTFKF 1120


>gi|332330347|gb|AEE43933.1| TIR-NBS-LRR resistance protein muRdr1I [Rosa multiflora]
          Length = 628

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 206/430 (47%), Positives = 285/430 (66%), Gaps = 4/430 (0%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD++ E +  L+D  + DVR IGI GMGGLGKTT+AR+VY+ ISH FE   FL NVRE+S
Sbjct: 199 MDTKLEDIDVLLDKETKDVRFIGIWGMGGLGKTTLARLVYEKISHLFEVCVFLANVREVS 258

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +  GLV LQ+Q+LSQ+ K  +  +W+V+ GI M       K VLLV+DD    +QL++L 
Sbjct: 259 ATHGLVYLQKQILSQIWKEENIQVWDVYSGITMTKRCFCNKAVLLVLDDADQSEQLENLV 318

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G ++WFG  SRIIIT+R+ H+L THG+++ Y+  GLN DEALQLF+ KAF+ Y+P ++ V
Sbjct: 319 GEKDWFGLRSRIIITTRNRHVLVTHGIEKPYELKGLNEDEALQLFSWKAFRNYEPEEDYV 378

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           + S   + YAGGLP+AL+ LGSFL  RS D W   L +L   P   + D+L++S+ GL E
Sbjct: 379 EQSKSFVMYAGGLPIALKTLGSFLYRRSPDAWNFALAKLRNTPNKTVFDLLKVSYVGLDE 438

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQ 299
           +EKKIFLDIACF    +  ++   L        I I VL+EK L+T+  NN + MHDL++
Sbjct: 439 MEKKIFLDIACFSSQCEAKFIIELLYSYDVCTGIAIEVLVEKSLLTISSNNEIGMHDLIR 498

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G +IV+++S EE G RSRLW   ++ HV T++TGTE+ EGI L  +  E   +   + 
Sbjct: 499 EMGCEIVRQESYEEPGGRSRLWFRNDIFHVFTKNTGTEVTEGIFLHLHQLEEADW---NL 555

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           +AFSKM NL+LL I NL+L  G ++L + LR+L W  YP K LP   Q D+  E+ + +S
Sbjct: 556 EAFSKMCNLKLLYIHNLRLSLGPKFLPDALRILKWSWYPSKSLPPCFQPDELTELSLVHS 615

Query: 420 RIGELWKGIK 429
            I  LW GIK
Sbjct: 616 NIDHLWNGIK 625


>gi|357449875|ref|XP_003595214.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355484262|gb|AES65465.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1362

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 259/636 (40%), Positives = 368/636 (57%), Gaps = 63/636 (9%)

Query: 1   MDSRCEKLR--FLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE 58
           ++SR E L+   L+DS    VR IGI GMGG+GKTT+A  +Y  ISH F+AS F+D+V +
Sbjct: 198 INSRIEALKNHLLLDSVDG-VRAIGIWGMGGIGKTTLALDLYGQISHRFDASCFIDDVSK 256

Query: 59  ISS-KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
           I     G +  Q+Q++ Q L +  + I N +    ++  RL  ++ LL++D+V  V+QL+
Sbjct: 257 IYRLHDGPLEAQKQIIFQTLGIEHHQICNRYSATYLIRHRLCHERALLILDNVDQVEQLE 316

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
            +  + EW G+GSRIII SRDEH+LK +GVD VYK   LN+ ++ +LF  KAFK    + 
Sbjct: 317 KIDVHLEWLGAGSRIIIISRDEHILKKYGVDVVYKVPLLNWRDSYKLFCRKAFKVENIIM 376

Query: 178 ECVQ-LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
              Q L+  I+RYA GLPLA++V+GSFL G +V EW+S L RL   P  +++D+LQ+SFD
Sbjct: 377 SNYQNLANEILRYANGLPLAIKVMGSFLFGCNVTEWKSALARLRESPDKDVIDVLQLSFD 436

Query: 237 GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
           GL+  EK+IFLDIACFF      YV N L  CGFH  IG+RVLI K LI+++   + MH 
Sbjct: 437 GLKHTEKEIFLDIACFFNSECEKYVKNILNCCGFHADIGLRVLINKSLISINGQNIEMHS 496

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL+ELG++IVQ  S  +  K SRLW  E++  V+  +   + VE IVL  Y  E      
Sbjct: 497 LLEELGRKIVQNSSSNDPRKWSRLWSTEQLYDVIM-AKMEKHVEAIVL-KYTEE------ 548

Query: 357 ASAKAFSKMTNLRLLKICN--LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
             A+  SKM+NLRLL I N    +      LSN+LR + W  YP K+LP++   ++ +E+
Sbjct: 549 VDAEHLSKMSNLRLLIIVNHTATISGFPSCLSNKLRYVEWPKYPFKYLPTSFHPNELVEL 608

Query: 415 YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
            +  S I  LWK  K+L  L+ + LS S  L ++ DF   PNLE L LEGC RL E+ PS
Sbjct: 609 ILDGSNIKNLWKNKKYLPNLRRLDLSDSRKLEKIMDFGEFPNLEWLNLEGCERLVELDPS 668

Query: 475 LLLHNKLIILNMKDCTSLITLPGKIL-MKSLEKLNLK-------------------SLP- 513
           + L  KL+ LN+KDC +L+++P  I  + SLE LN++                   S+P 
Sbjct: 669 IGLLRKLVYLNLKDCYNLVSIPNNIFCLSSLEYLNMRCCFKVFTNSRHLTTPGISESVPR 728

Query: 514 -------------------------TTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSE 548
                                    T +  L CL  +D+S   +  + P+ +E +  +  
Sbjct: 729 VRSTSGVFKHVMLPHHLPFLAPPTNTYLHSLYCLREVDISF-CRLSQVPDTIECLHWVER 787

Query: 549 LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
           L+L G     LP S+  LS LV LNL++C+ LE LP
Sbjct: 788 LNLGGNDFATLP-SLRKLSKLVYLNLQHCKLLESLP 822



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 150/556 (26%), Positives = 236/556 (42%), Gaps = 125/556 (22%)

Query: 501  MKSLEKLNLKSLPTTISGL-KCLSTLDVSGDLKFREFPE-------IVEHMEHLSELHLE 552
            M +L  L + +   TISG   CLS       L++ E+P+          H   L EL L+
Sbjct: 557  MSNLRLLIIVNHTATISGFPSCLS-----NKLRYVEWPKYPFKYLPTSFHPNELVELILD 611

Query: 553  GTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVR 612
            G+ I+ L  + + L  L  L+L + R LE + +       L  L L GC +L        
Sbjct: 612  GSNIKNLWKNKKYLPNLRRLDLSDSRKLEKI-MDFGEFPNLEWLNLEGCERLV------- 663

Query: 613  SMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC 672
                            E+  SI LL KL  LNL DC NLV +P++I  L SL+ LN+  C
Sbjct: 664  ----------------ELDPSIGLLRKLVYLNLKDCYNLVSIPNNIFCLSSLEYLNMRCC 707

Query: 673  FKL---------ENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPS 723
            FK+           + E++ ++ S   +      +PH   + +  P N            
Sbjct: 708  FKVFTNSRHLTTPGISESVPRVRSTSGV-FKHVMLPHHLPFLA-PPTNTY---------- 755

Query: 724  LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIEL 783
            L  L  LR+++++ C L +  +P  I  L  ++ L L  N F +LP S+  LSKL+ + L
Sbjct: 756  LHSLYCLREVDISFCRLSQ--VPDTIECLHWVERLNLGGNDFATLP-SLRKLSKLVYLNL 812

Query: 784  EDCKRLQSLPQL--PPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNK-- 839
            + CK L+SLPQL  P  I + RV G     T L      K              LG +  
Sbjct: 813  QHCKLLESLPQLPFPTAIGRERVEGGYYRPTGLFIFNCPK--------------LGEREC 858

Query: 840  --SLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLV 897
              S+ FS + ++++A       + +V PGSEIP W   ++ G SI + + S + +   ++
Sbjct: 859  YSSMTFSWMMQFIKANPFYLNRIHIVSPGSEIPSWINNKSVGDSIRIDQ-SPIKHDNNII 917

Query: 898  GYAICCVFH----------------VLK---NSRGNNCFGSYPTHQLNCHIGHGIYGIGF 938
            G+  C VF                 VLK   N R ++   S  T  +   +   +  I  
Sbjct: 918  GFVCCAVFSMAPHRGRFPSSAHMELVLKYPFNKRKSDKSLSRITVSVPVILNGSLVTITT 977

Query: 939  RDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQ--GLEVKMC 996
            +       S H+W++Y   ++ +  R                + FE + GQ  G+EVK C
Sbjct: 978  K-------SSHIWIIYFHCESYHAFR---------------EIRFEIFEGQALGMEVKSC 1015

Query: 997  GLHPVYMDEVEELDQT 1012
            G   V   +++E + T
Sbjct: 1016 GYRWVCKQDLQEFNLT 1031


>gi|356497765|ref|XP_003517729.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1135

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 282/748 (37%), Positives = 409/748 (54%), Gaps = 77/748 (10%)

Query: 7   KLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLV 66
           ++  L+   S  VR+IGI GMGG+GKTT+A  +Y  +   FE   FL NVRE + K GL 
Sbjct: 206 RIESLLKIDSRKVRVIGIWGMGGIGKTTLATALYAKLFSRFEGHCFLGNVREQAEKQGLD 265

Query: 67  SLQRQLLSQLLKLADNSIWNVFDGID--MLGSRLQRKKVLLVIDDVVDVKQLQSLAGNRE 124
            L+ +L S+LL   +N +      ++   +  RL+RKKV LV+DDV   +QL+ L  +  
Sbjct: 266 FLRTKLFSELLP-GENHLHENMPKVEYHFITRRLKRKKVFLVLDDVASSEQLEDLIDDFN 324

Query: 125 WFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSA 184
            FG GSR+I+T+RD+H+     VDE+Y+   LN  ++LQLF + AF+   P     +LS 
Sbjct: 325 CFGPGSRVIVTTRDKHIFSY--VDEIYEVKELNDLDSLQLFCLNAFREKHPKNGFEELSE 382

Query: 185 RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKK 244
            +I Y  G PLAL+VLG+ L  RS   W   L +L+  P  +I ++L++SFD L   E++
Sbjct: 383 SVIAYCKGNPLALKVLGARLRSRSEQAWYCELRKLQKIPNVKIHNVLKLSFDDLDHTEQE 442

Query: 245 IFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQ 303
           IFLDIACFFKG  RD++ + LE C F P IGI VL +K LIT+   +T+ MHDL+QE+G 
Sbjct: 443 IFLDIACFFKGEYRDHIISLLEACNFFPAIGIEVLADKSLITISPEDTIEMHDLIQEMGW 502

Query: 304 QIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFS 363
            IV ++S ++ GKRSRLW  EEV  VL  + GTE +EGI+LD    E+   L  S  +F+
Sbjct: 503 NIVHQESIKDPGKRSRLWDPEEVFDVLKYNRGTEAIEGIILDLSKIED---LHLSFDSFT 559

Query: 364 KMTNLRLLKIC--------NLQLP-NGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
           KMTN+R LK           + LP NGL+ LS++LR L W GY L+ LPS       +E+
Sbjct: 560 KMTNVRFLKFYYGKWSSKGKIYLPKNGLKSLSDKLRHLQWHGYCLESLPSTFSAKFLVEL 619

Query: 415 YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
            M YS + +LW G+++L  LK + L + ENL+ +PD + A NLE L L  C  L ++HPS
Sbjct: 620 VMPYSNLQKLWDGVQNLVNLKDIDLRYCENLVEVPDLSKATNLEDLSLSQCKSLRQVHPS 679

Query: 475 LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFR 534
           +L   KL  L+++ C  + +L   + ++SL+ L L    +  S LK  S + V       
Sbjct: 680 ILSLPKLQSLDLEGCIEIQSLQSDVHLESLQDLRL----SNCSSLKEFSVMSVE------ 729

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS---NLK 591
                      L  L L+GT I+ LP SI   + L  ++++ C +L+     +S      
Sbjct: 730 -----------LRRLWLDGTHIQELPASIWGCTKLKFIDVQGCDNLDGFGDKLSYDPRTT 778

Query: 592 CLRSLKLSGCSKLK--KFPEIVRSMKDLSELFLDG------------------------T 625
           C  SL LSGC +L       I+  M+ L+ L L+                         +
Sbjct: 779 CFNSLVLSGCKQLNASNLDFILVGMRSLTSLELENCFNLRTLPDSIGLLSSLKLLKLSRS 838

Query: 626 SIKEVPSSIELLTKLELLNLSDCKNLV---RLPSSIIALKSLKTLNLSGCFKLENVPETL 682
           +++ +P+SIE L KL  L L  C  LV    LP S+  L ++   +L   F   N+P  L
Sbjct: 839 NVESLPASIENLVKLRRLYLDHCMKLVSLPELPESLWLLSAVNCASLVTNFTQLNIPFQL 898

Query: 683 GQIESLEELDIS----GTAVPHSTSWYS 706
            Q   LE+L  S    G  VP   S+++
Sbjct: 899 KQ--GLEDLPQSVFLPGDHVPERFSFHA 924



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 150/531 (28%), Positives = 235/531 (44%), Gaps = 106/531 (19%)

Query: 492  LITLPGKILMKSLEKL-----NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHL 546
            L +LP     K L +L     NL+ L   +  L  L  +D+       E P++ +   +L
Sbjct: 604  LESLPSTFSAKFLVELVMPYSNLQKLWDGVQNLVNLKDIDLRYCENLVEVPDLSK-ATNL 662

Query: 547  SELHL-EGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
             +L L +  ++R +  SI  L  L  L+L+ C  ++ L   V +L+ L+ L+LS CS LK
Sbjct: 663  EDLSLSQCKSLRQVHPSILSLPKLQSLDLEGCIEIQSLQSDV-HLESLQDLRLSNCSSLK 721

Query: 606  KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLK 665
            +F   V S+ +L  L+LDGT I+E+P+SI   TKL                        K
Sbjct: 722  EFS--VMSV-ELRRLWLDGTHIQELPASIWGCTKL------------------------K 754

Query: 666  TLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLS 725
             +++ GC  L+   + L             +  P +T + S +     + + +     L 
Sbjct: 755  FIDVQGCDNLDGFGDKL-------------SYDPRTTCFNSLVLSGCKQLNASNLDFILV 801

Query: 726  GLCSLRKLNLTDC-NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELE 784
            G+ SL  L L +C NL    LP  IG L SLK L LS+++  SLP SI +L KL  + L+
Sbjct: 802  GMRSLTSLELENCFNLR--TLPDSIGLLSSLKLLKLSRSNVESLPASIENLVKLRRLYLD 859

Query: 785  DCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFS 844
             C +L SLP+LP ++  +    CASLVT    L                      ++ F 
Sbjct: 860  HCMKLVSLPELPESLWLLSAVNCASLVTNFTQL----------------------NIPF- 896

Query: 845  MLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCV 904
             L++ LE +       SV +PG  +PE F +  EG+S+T+    +L     L G  I CV
Sbjct: 897  QLKQGLEDLPQ-----SVFLPGDHVPERFSFHAEGASVTI---PHLPLSDLLCGL-IFCV 947

Query: 905  FHVLKNSRGNNCFGSYPTHQLNCHI---GHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCY 961
            F       G   +       ++C I      I G G R        DH++L ++  +   
Sbjct: 948  FLSQSPPHGKYVY-------VDCFIYKNSQRIDGRGARLHDQNLILDHVFLWFVDIKQFG 1000

Query: 962  DIRLPLESNLEPFES-NHVNVSFE--------PWLGQGLEVKMCGLHPVYM 1003
            D  L     L+  E+ +  N+SFE         W  +   +K CG++P+Y+
Sbjct: 1001 DDSLL--RRLQKGEACDPSNISFEFLVEDEDGEWSTKN--IKGCGIYPIYV 1047


>gi|225460287|ref|XP_002279207.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1554

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 288/723 (39%), Positives = 414/723 (57%), Gaps = 58/723 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD   E+L+ L++   +DV +IGI G+GG+GKTTIA+ +Y+ IS +FE S FL +VRE S
Sbjct: 198 MDYHLEQLKALINIELNDVCIIGIYGIGGIGKTTIAKAIYNEISCKFEGSSFLADVREQS 257

Query: 61  -SKGGLVSLQRQLLSQLL----KLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQ 115
               GL+ LQ QLL   L    K   +SI+     I     +L+ K+VL+++DDV   +Q
Sbjct: 258 KDNAGLLRLQNQLLDDTLAGTYKKKSSSIYGATHEIR---DKLRLKRVLVILDDVDGRRQ 314

Query: 116 LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP 175
           L  LAG  EWFGSGSRIIIT+R + L+   G ++ Y+P  LN +EA++LF++ AFK   P
Sbjct: 315 LDYLAGECEWFGSGSRIIITTRHKDLVAIDGANKSYEPRKLNDEEAIKLFSLYAFKQNVP 374

Query: 176 LQECVQLSARIIRYAGGLPLALEVLGSFLSG-RSVDEWRSTLERLEIEPPSEILDILQIS 234
            +    L    ++YA GLPLAL VLGS LS  R + EW S L +LE EP  EI ++L+ S
Sbjct: 375 RENYKNLCENAVKYAQGLPLALAVLGSTLSSKRGIREWESELRKLEKEPNREIYNVLRTS 434

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
           FDGL  +E +IFLDIACFFKG DRD+V+  L+         I  L E+CLIT+ +N ++M
Sbjct: 435 FDGLSRVEGEIFLDIACFFKGKDRDFVSRILDDAEGE----ISNLCERCLITILDNKIYM 490

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           HDL+Q++G ++V+ +   E G++SRLW  ++V  VLT + GT+ +EG+ +D    + E+ 
Sbjct: 491 HDLIQQMGWEVVREKCQNEPGEQSRLWDLDDVSSVLTRNAGTKAIEGLFMD-MSAQQEIQ 549

Query: 355 LCASAKAFSKMTNLRLLKI------------------CNLQLPNGLEYLSNRLRLLGWRG 396
              + + F+KM  LRLLKI                    + LP  L+  S  LR L W G
Sbjct: 550 F--TTETFTKMNKLRLLKIHQDAKYDHIKEIDGDVHFPQVALPEDLKLPSFELRYLHWDG 607

Query: 397 YPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPN 456
           Y LK+LP N      +E+ +  S I +LW+G K L KLKV+ L+HS+ L+  P F+  PN
Sbjct: 608 YSLKYLPPNFHPKNLVELNLRCSNIKQLWEGNKVLKKLKVINLNHSQRLMEFPSFSMMPN 667

Query: 457 LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPG-KILMKSLEKLNL-----K 510
           LE L LEGC  L  +   +     L  L+  DC+ L   P  K  MK+L+KL+L     +
Sbjct: 668 LEILTLEGCISLKRLPMDIDRLQHLQTLSCHDCSKLEYFPEIKYTMKNLKKLDLYGTAIE 727

Query: 511 SLP-TTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPL-SIELLSG 568
            LP ++I  L+ L  L+++        PE +  +  L  LHL G+ I    + S E LS 
Sbjct: 728 KLPSSSIEHLEGLEYLNLAHCKNLVILPENI-CLSSLRVLHLNGSCITPRVIRSHEFLSL 786

Query: 569 LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKK-FPEIVRSMKDLSELFLDGTSI 627
           L  L+L +C  +E     + +L  L+ L LS C  +K+  P+ +  +  L  L L GT+I
Sbjct: 787 LEELSLSDCEVMEGALDHIFHLSSLKELDLSNCYLMKEGIPDDIYRLSSLQALDLSGTNI 846

Query: 628 KEVPSSIELLTKLELLNLSDCKNL---VRLPSSIIAL---KSLKTLN--------LSGCF 673
            ++P+SI  L+KL+ L L  CK L   ++LPSS+  L    S K+L+        L  CF
Sbjct: 847 HKMPASIHHLSKLKFLWLGHCKQLQGSLKLPSSVRFLDGHDSFKSLSWQRWLWGFLFNCF 906

Query: 674 KLE 676
           K E
Sbjct: 907 KSE 909



 Score =  206 bits (523), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 165/524 (31%), Positives = 260/524 (49%), Gaps = 69/524 (13%)

Query: 544  EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            EH  +L L  TAI  L L+IE LSG+  L L+NC+ LE LP  +  LK L +   SGCSK
Sbjct: 1067 EHEEKLCLGETAINEL-LNIECLSGIQNLCLRNCKRLESLPSDIYKLKSLTTFSCSGCSK 1125

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
            L+ FPEI   MK L EL LDGTS+KE+PSSI+ L  L+ L+L +CKNL+ +P +I  L+S
Sbjct: 1126 LQSFPEITEDMKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNICNLRS 1185

Query: 664  LKTLNLSGCFKLENVPETLGQIESLE-----ELDISGTAVPHSTSWYSYIPINLMRKSV- 717
            L+TL +SGC KL  +P+ LG +  L       LD     +P  +       +NL R ++ 
Sbjct: 1186 LETLIVSGCSKLNKLPKNLGSLTQLRLLCAARLDSMSCQLPSFSDLRFLKILNLDRSNLV 1245

Query: 718  --ALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHL 775
              A++   +S L SL +++L+ CNL EG +PS+I  L SL+ LYL  N F S+P+ I  L
Sbjct: 1246 HGAIR-SDISILYSLEEVDLSYCNLAEGGIPSEICYLSSLQALYLKGNHFSSIPSGIGQL 1304

Query: 776  SKLLNIELEDCKRLQSLPQLPPNIRQVRVNGC--------ASLVTLLDALKLCKSDSTMI 827
            SKL  ++L  C+ LQ +P+LP ++R +  +GC           + L    K  KS+   +
Sbjct: 1305 SKLKILDLSHCEMLQQIPELPSSLRVLDAHGCIRLESLSSPQSLLLSSLFKCFKSEIQEL 1364

Query: 828  AC---LDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
             C   L SL L G           +   V+      S ++ G+    W    ++GS +T+
Sbjct: 1365 ECRMVLSSLLLQGF----------FYHGVNIVISESSGILEGT----W----HQGSQVTM 1406

Query: 885  TRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDK--- 941
              P N Y     +G+A+C  +  L N   +     YP     C +       G++ +   
Sbjct: 1407 ELPWNWYENNNFLGFALCSAYSSLDNESEDGDGDGYPC-TFKCCLTFWASESGWQCELPL 1465

Query: 942  ------FGQAG-SDHLWLLYLSRQTCYDIRLPLESNLEPFESNH--VNVSFEPWL-GQGL 991
                  +   G SD +W++Y  +             + P    H  ++ SF  ++ G+ +
Sbjct: 1466 KSRCTCYNDGGVSDQVWVMYYPKGA---------FRMNPVSVKHGSLSASFHGYIHGRAV 1516

Query: 992  EVKMCGLHPVYMDEVEELDQTTNQPSRFTVYNLNEFDQHFVGSK 1035
            +VK C +  ++        Q ++      +   +++ Q  +G++
Sbjct: 1517 KVKKCAVQFLF-------SQGSSVQDAHVIKGCSDYTQGIIGTR 1553



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 141/440 (32%), Positives = 212/440 (48%), Gaps = 72/440 (16%)

Query: 488 DCTSLITLPGKILMKSLEKLNL-----KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEH 542
           D  SL  LP     K+L +LNL     K L      LK L  ++++   +  EFP     
Sbjct: 606 DGYSLKYLPPNFHPKNLVELNLRCSNIKQLWEGNKVLKKLKVINLNHSQRLMEFP----- 660

Query: 543 MEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
                              S  ++  L +L L+ C SL+ LP+ +  L+ L++L    CS
Sbjct: 661 -------------------SFSMMPNLEILTLEGCISLKRLPMDIDRLQHLQTLSCHDCS 701

Query: 603 KLKKFPEIVRSMKDLSELFLDGTSIKEVPSS-IELLTKLELLNLSDCKNLVRLPSSIIAL 661
           KL+ FPEI  +MK+L +L L GT+I+++PSS IE L  LE LNL+ CKNLV LP +I  L
Sbjct: 702 KLEYFPEIKYTMKNLKKLDLYGTAIEKLPSSSIEHLEGLEYLNLAHCKNLVILPENI-CL 760

Query: 662 KSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKL 721
            SL+ L+L+G      V  +   +  LEEL +S   V                      L
Sbjct: 761 SSLRVLHLNGSCITPRVIRSHEFLSLLEELSLSDCEVMEGA------------------L 802

Query: 722 PSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNI 781
             +  L SL++L+L++C LM+  +P DI  L SL+ L LS  +   +P SI HLSKL  +
Sbjct: 803 DHIFHLSSLKELDLSNCYLMKEGIPDDIYRLSSLQALDLSGTNIHKMPASIHHLSKLKFL 862

Query: 782 ELEDCKRLQSLPQLPPNIRQVRVNGCASLVT------LLDALKLC-KSDSTMIACLDSLK 834
            L  CK+LQ   +LP ++R   ++G  S  +      L   L  C KS+   + C     
Sbjct: 863 WLGHCKQLQGSLKLPSSVR--FLDGHDSFKSLSWQRWLWGFLFNCFKSEIQDVECRG--- 917

Query: 835 LLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKK 894
             G   + F     + + +       S+V+P   +P W  YQN G+ I +  P + Y   
Sbjct: 918 --GWHDIQFGQSGFFGKGI-------SIVIP--RMPHWISYQNVGNEIKIELPMDWYEDN 966

Query: 895 KLVGYAICCVFHVLKNSRGN 914
             +G+A+C V+  L+N+ G+
Sbjct: 967 DFLGFALCAVYVPLENTLGD 986



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/214 (37%), Positives = 116/214 (54%), Gaps = 30/214 (14%)

Query: 509  LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSG 568
            L+SLP+ I  LK L+T   SG  K + FPEI E M+ L EL L+GT+++ LP SI+ L G
Sbjct: 1102 LESLPSDIYKLKSLTTFSCSGCSKLQSFPEITEDMKILRELRLDGTSLKELPSSIQHLQG 1161

Query: 569  LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF---LDGT 625
            L  L+L+NC++L  +P  + NL+ L +L +SGCSKL K P+ + S+  L  L    LD  
Sbjct: 1162 LKYLDLENCKNLLNIPDNICNLRSLETLIVSGCSKLNKLPKNLGSLTQLRLLCAARLDSM 1221

Query: 626  SIK-----------------------EVPSSIELLTKLELLNLSDCKNLVR--LPSSIIA 660
            S +                        + S I +L  LE ++LS C NL    +PS I  
Sbjct: 1222 SCQLPSFSDLRFLKILNLDRSNLVHGAIRSDISILYSLEEVDLSYC-NLAEGGIPSEICY 1280

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
            L SL+ L L G     ++P  +GQ+  L+ LD+S
Sbjct: 1281 LSSLQALYLKG-NHFSSIPSGIGQLSKLKILDLS 1313



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 127/278 (45%), Gaps = 34/278 (12%)

Query: 350  ENEVYLCASAKAFSKMTNLRLLK-ICNLQLPNGLEYLSNRLRLLGWRGYPLKFLP----- 403
            E+E  LC    A +++ N+  L  I NL L N       RL  L    Y LK L      
Sbjct: 1067 EHEEKLCLGETAINELLNIECLSGIQNLCLRN-----CKRLESLPSDIYKLKSLTTFSCS 1121

Query: 404  --SNLQ--------MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FT 452
              S LQ        M    E+ +  + + EL   I+HL  LK + L + +NL+ +PD   
Sbjct: 1122 GCSKLQSFPEITEDMKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNIC 1181

Query: 453  GAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSL-ITLPGKILMKSLEKLNLK- 510
               +LE LI+ GC++L ++  +L    +L +L      S+   LP    ++ L+ LNL  
Sbjct: 1182 NLRSLETLIVSGCSKLNKLPKNLGSLTQLRLLCAARLDSMSCQLPSFSDLRFLKILNLDR 1241

Query: 511  ------SLPTTISGLKCLSTLDVS-GDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSI 563
                  ++ + IS L  L  +D+S  +L     P  + ++  L  L+L+G     +P  I
Sbjct: 1242 SNLVHGAIRSDISILYSLEEVDLSYCNLAEGGIPSEICYLSSLQALYLKGNHFSSIPSGI 1301

Query: 564  ELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
              LS L +L+L +C  L+ +P   S+   LR L   GC
Sbjct: 1302 GQLSKLKILDLSHCEMLQQIPELPSS---LRVLDAHGC 1336


>gi|356503056|ref|XP_003520328.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 968

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 238/568 (41%), Positives = 347/568 (61%), Gaps = 26/568 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           + SR +K+   +++ S+   +I I GMGG GKTT A+ +Y+ I+  F    F++++RE+ 
Sbjct: 202 LKSRVQKVIGFIENQSTRACIIVIWGMGGSGKTTAAKAIYNEINCRFGHKSFIEDIREVC 261

Query: 61  SKG---GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
           S+    GLVSLQ +LLS +LK  ++ I NV  G  M+  RL  K+VL+V+DDV ++ Q++
Sbjct: 262 SQTESKGLVSLQEKLLSDILK-TNHQIQNVGMGTIMIEKRLSGKRVLIVLDDVNEIGQVE 320

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
            L GN EWFG G+ IIIT+RD  LL T  VD VY+   +N +E+L+LF+  AF   +P +
Sbjct: 321 GLCGNCEWFGPGTVIIITTRDVGLLNTLKVDCVYEMEQMNENESLELFSWHAFDEAKPRK 380

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
           +  +L+  ++ Y GGLPLAL VLGS+L+ R  + W S L +LE+ P  E+   L+ISFDG
Sbjct: 381 DFNELARSVVVYCGGLPLALRVLGSYLNNRRKNLWESVLSKLEMIPNGEVQKKLRISFDG 440

Query: 238 LQE-LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMH 295
           L + +EK IFLD+ CFF G DR YVT+ L G   H    I  LI + LI V  NN L MH
Sbjct: 441 LSDYMEKDIFLDVCCFFIGKDRAYVTDVLNGRKLHAKTVITDLIGRSLIRVEKNNKLGMH 500

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
            LLQE+G++I++ +  +E GKRSRLW  E+V  VLT++TGTE +EG+ L ++        
Sbjct: 501 PLLQEMGREIIREKLWKEPGKRSRLWFHEDVLDVLTKNTGTEAIEGLALKSHLTSRA--- 557

Query: 356 CASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
           C    AF KM NLRLL++ + QL     YLS +L+ + W+G+  K++P+NL ++  I   
Sbjct: 558 CFKTCAFEKMKNLRLLQLDHAQLAGNYCYLSKQLKWICWQGFRSKYIPNNLYLEDVIAFD 617

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           + +S +  LW+  + L  LK++ LSHS++L   PDF+  P+LEKLIL+ C  L ++H S+
Sbjct: 618 LKHSHLQLLWEEPQVLWNLKILNLSHSKDLTETPDFSTLPSLEKLILKDCPSLCKVHQSI 677

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
              N L+++N+KDCTS                 L +LP  I  LK L TL +SG  K   
Sbjct: 678 GKLNNLLLINLKDCTS-----------------LSNLPKEIYKLKSLKTLILSGCSKINI 720

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSI 563
               +  ME L  L  E TA++ +P S 
Sbjct: 721 LENDIVQMESLITLIAENTAMKQVPFSF 748



 Score = 46.6 bits (109), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 47/113 (41%), Positives = 61/113 (53%), Gaps = 5/113 (4%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNL 651
           L+ L LS    L + P+   ++  L +L L D  S+ +V  SI  L  L L+NL DC +L
Sbjct: 636 LKILNLSHSKDLTETPDF-STLPSLEKLILKDCPSLCKVHQSIGKLNNLLLINLKDCTSL 694

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA---VPHS 701
             LP  I  LKSLKTL LSGC K+  +   + Q+ESL  L    TA   VP S
Sbjct: 695 SNLPKEIYKLKSLKTLILSGCSKINILENDIVQMESLITLIAENTAMKQVPFS 747



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 35/60 (58%)

Query: 575 KNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSI 634
           K+C SL  LP  +  LK L++L LSGCSK+      +  M+ L  L  + T++K+VP S 
Sbjct: 689 KDCTSLSNLPKEIYKLKSLKTLILSGCSKINILENDIVQMESLITLIAENTAMKQVPFSF 748


>gi|227438159|gb|ACP30569.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1173

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 307/915 (33%), Positives = 464/915 (50%), Gaps = 101/915 (11%)

Query: 1    MDSRCEKLRFLMDSG-SSDVRMIGICGMGGLGKTTIARVVYDLIS---HEFEASGFLDNV 56
            M +  EK+  L+      +VRMIGI G  G+GKTTIAR ++  +S     F+ + F++NV
Sbjct: 212  MGAHMEKIEPLLRPDLKEEVRMIGIWGPPGIGKTTIARFLFHQLSSNNDNFQHTVFVENV 271

Query: 57   REISSK--------GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVID 108
            + + +            + LQ+  LS+++K  D  I ++    D L    + KKVL+V+D
Sbjct: 272  KAMYTTIPVSSDDYNAKLHLQQSFLSKIIK-KDIEIPHLGVAQDTL----KDKKVLVVLD 326

Query: 109  DVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMK 168
            DV    QL ++A    WFG+GSRII T++D HLLK HG++++Y+    + DEALQ+F   
Sbjct: 327  DVNRSVQLDAMAEETGWFGNGSRIIFTTQDRHLLKAHGINDLYEVGSPSTDEALQIFCTY 386

Query: 169  AFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEIL 228
            AF+   P      LS  + + AG LPL L+V+GS L G S +EW++ L  L      +I 
Sbjct: 387  AFRQKSPKAGFEDLSREVTKLAGDLPLGLKVMGSCLRGLSKEEWKNKLPSLRNNLHGDIE 446

Query: 229  DILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH 288
              L+ S+D L+  +K +FL IACFF     + V + L     +   GI VL EK LI+ +
Sbjct: 447  SALKFSYDALRREDKNLFLHIACFFNHEKIEIVEHILARAFLNVRQGIHVLTEKSLISTN 506

Query: 289  NNTLWMHDLLQELGQQIVQRQS-----PEELGKRSRLWKEEEVCHVLTEST-GTELVEGI 342
            +  + MHDLL +LG++IV+  S       E G+R  L    ++C VL++ T GT  V GI
Sbjct: 507  SEYVVMHDLLAQLGREIVRNVSTSEHLTREPGQRQFLVDARDICEVLSDDTAGTSSVIGI 566

Query: 343  VLDNYHHENEVYLCASAKAFSKMTNLRLLKICN----LQLPNGLEYLSNRLRLLGWRGYP 398
             L     E  ++   S  AF +MTNL+ L+I +    L  P  L  +S ++RLL W  +P
Sbjct: 567  NLKLSKAEERLH--TSESAFERMTNLQFLRIGSGYNGLYFPQSLNSISRKIRLLEWNDFP 624

Query: 399  LKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLE 458
            +  LPSN      +++ M  S++ +LW GI+ L  LK M L  S+NL ++PD + A NL 
Sbjct: 625  MTCLPSNFSPQFLVKLCMQGSKLKKLWDGIQPLRNLKWMDLRSSKNLKKIPDLSTATNLT 684

Query: 459  KLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMK-SLEKLNLKS------ 511
             L L GC+ L  +  S+     L+ L++ DCT L+ LP  I    +L+  +LK       
Sbjct: 685  YLCLRGCSSLENLPSSIGNATNLLNLDLSDCTRLVNLPSSIWNAINLQTFDLKDCSSLVE 744

Query: 512  LPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLV 570
            LP +I     L +L++ G    ++ P  + +  +L  L+L+  +++  LP SIE    L 
Sbjct: 745  LPLSIGNAINLKSLNLGGCSSLKDLPSSIGNAPNLQNLYLDYCSSLVNLPSSIENAINLQ 804

Query: 571  LLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEV 630
            +L+LK C SL  LP+ + N   LR L LSGCS                       S+ E+
Sbjct: 805  VLDLKYCSSLVELPIFIGNATNLRYLDLSGCS-----------------------SLVEL 841

Query: 631  PSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEE 690
            PSS+  L KL  L +  C  L  LP + I + SL+ L+L+GC  L+  PE    I+ L  
Sbjct: 842  PSSVGKLHKLPKLTMVGCSKLKVLPIN-INMVSLRELDLTGCSSLKKFPEISTNIKHLHL 900

Query: 691  LDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIG 750
            +  S   VP S     ++    M  S  LK  S     ++ +L++TD   +      DIG
Sbjct: 901  IGTSIEEVPSSIKSXXHLEHLRMSYSQNLK-KSPHAXXTITELHITDTEXL------DIG 953

Query: 751  NLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
            +   +KEL              +HL +L+   L  CK L SLPQLP ++  +  + C SL
Sbjct: 954  SW--VKEL--------------SHLGRLV---LYGCKNLVSLPQLPGSLLDLDASNCESL 994

Query: 811  VTLLDAL-KLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEI 869
              L  +L  L  +    I C             F + +E +  +S T   L  V+PG E+
Sbjct: 995  ERLDSSLHNLNSTTFRFINC-------------FKLNQEAIHLISQTPCRLVAVLPGGEV 1041

Query: 870  PEWFMYQNEGSSITV 884
            P  F Y+  G+ +TV
Sbjct: 1042 PACFTYRAFGNFVTV 1056


>gi|297809509|ref|XP_002872638.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297318475|gb|EFH48897.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 853

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 252/676 (37%), Positives = 378/676 (55%), Gaps = 45/676 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD + E++  L+   S DVR IGI G  G+GKTTIA  ++  IS ++E   FL ++ +  
Sbjct: 180 MDIQVEEILSLLCIESLDVRSIGIWGTVGIGKTTIAEEIFRRISVQYETCVFLKDLHKEV 239

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
              G  +++   LS++L++  + I         L SRLQRK++L+++DDV D + + +  
Sbjct: 240 EVKGHDAVREDFLSRVLEVEPHVIRISDIKTSFLRSRLQRKRILVILDDVNDYRDVGTFL 299

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G   +FG GSRII+TSR+  +     +D VY+   L+   +++L +   F+     +   
Sbjct: 300 GKLNYFGPGSRIIMTSRNRRVFVLCKIDHVYEVKPLDIPTSVRLLDRGTFQIVLSPEVYK 359

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTL-ERLEIEPPSEILDILQISFDGLQ 239
            LS  +++++ G P  L+ L S      VD  R+ L + ++   P  I  I + S  GL 
Sbjct: 360 TLSLELVKFSNGNPQVLQFLSS------VDRERNRLSQEVKTTSPIYIPGIFERSCCGLD 413

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLL 298
           + E+ IFLDIACFF   D+D V   L+GCGF   +G R L++K L+T+  +N + M   +
Sbjct: 414 DNERSIFLDIACFFNRMDKDNVAMLLDGCGFSTHVGFRGLVDKSLLTISQHNFVDMLSFI 473

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           Q  G++IV+++S +  G RSRLW  E++  V    TGT  +EGI LD      +    A+
Sbjct: 474 QATGREIVRQESADRPGDRSRLWNAEDIRDVFINDTGTTAIEGIFLDMSKQTFD----AN 529

Query: 359 AKAFSKMTNLRLLKI-CN-------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK 410
              F KM NLRLLK+ C+       +  P GLEYL ++LRLL W  YPL  LP +   + 
Sbjct: 530 PNVFEKMCNLRLLKLYCSKVEEKHGVYFPQGLEYLPSKLRLLHWEFYPLSSLPESFNPEN 589

Query: 411 TIEIYMCYSRIGELWKGIK----HLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
            +E+ +  S   +LWKG K     L  LK M LS+S  L ++P  + APNLE + LEGC 
Sbjct: 590 LVELNLSSSCARKLWKGKKARFLSLGNLKKMKLSYSYQLTKIPRLSSAPNLEHIDLEGCN 649

Query: 467 RLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLD 526
            L  I  S+    K++ LN+K C+ L ++P  + ++SLE LNL                 
Sbjct: 650 SLLSISQSVSYLKKIVFLNLKGCSKLESIPSTVDLESLEVLNL----------------- 692

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVT 586
            SG  K   FPEI  +++   EL++ GT I+ +P SI+ L  L  L+L+N R L+ LP +
Sbjct: 693 -SGCSKLENFPEISPNVK---ELYMGGTMIQEVPSSIKNLVLLEKLDLENSRHLKNLPTS 748

Query: 587 VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLS 646
           +  LK L +L LSGC+ L++FP++ R MK L  L L  T+++E+PSSI  LT LE L   
Sbjct: 749 ICKLKHLETLNLSGCTSLERFPDLSRRMKCLRFLDLSRTAVRELPSSISYLTALEELRFV 808

Query: 647 DCKNLVRLPSSIIALK 662
           DCKNLVRLP +   L+
Sbjct: 809 DCKNLVRLPDNAWTLR 824



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 105/165 (63%), Gaps = 5/165 (3%)

Query: 545 HLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           +L  + LEG  ++  +  S+  L  +V LNLK C  LE +P TV +L+ L  L LSGCSK
Sbjct: 639 NLEHIDLEGCNSLLSISQSVSYLKKIVFLNLKGCSKLESIPSTV-DLESLEVLNLSGCSK 697

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
           L+ FPEI  ++K   EL++ GT I+EVPSSI+ L  LE L+L + ++L  LP+SI  LK 
Sbjct: 698 LENFPEISPNVK---ELYMGGTMIQEVPSSIKNLVLLEKLDLENSRHLKNLPTSICKLKH 754

Query: 664 LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI 708
           L+TLNLSGC  LE  P+   +++ L  LD+S TAV    S  SY+
Sbjct: 755 LETLNLSGCTSLERFPDLSRRMKCLRFLDLSRTAVRELPSSISYL 799



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/268 (33%), Positives = 133/268 (49%), Gaps = 17/268 (6%)

Query: 536 FPEIVEHM-EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP---VTVSNLK 591
           FP+ +E++   L  LH E   +  LP S      LV LNL +  + ++         +L 
Sbjct: 557 FPQGLEYLPSKLRLLHWEFYPLSSLPESFNP-ENLVELNLSSSCARKLWKGKKARFLSLG 615

Query: 592 CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKN 650
            L+ +KLS   +L K P +  S  +L  + L+G  S+  +  S+  L K+  LNL  C  
Sbjct: 616 NLKKMKLSYSYQLTKIPRL-SSAPNLEHIDLEGCNSLLSISQSVSYLKKIVFLNLKGCSK 674

Query: 651 LVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT---AVPHSTSWYSY 707
           L  +PS++  L+SL+ LNLSGC KLEN PE    ++   EL + GT    VP S      
Sbjct: 675 LESIPSTV-DLESLEVLNLSGCSKLENFPEISPNVK---ELYMGGTMIQEVPSSIKNLVL 730

Query: 708 IPINLMRKSVALK-LP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSF 765
           +    +  S  LK LP S+  L  L  LNL+ C  +E   P     +  L+ L LS+ + 
Sbjct: 731 LEKLDLENSRHLKNLPTSICKLKHLETLNLSGCTSLE-RFPDLSRRMKCLRFLDLSRTAV 789

Query: 766 VSLPTSITHLSKLLNIELEDCKRLQSLP 793
             LP+SI++L+ L  +   DCK L  LP
Sbjct: 790 RELPSSISYLTALEELRFVDCKNLVRLP 817


>gi|297850934|ref|XP_002893348.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297339190|gb|EFH69607.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1488

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 347/1193 (29%), Positives = 559/1193 (46%), Gaps = 245/1193 (20%)

Query: 8    LRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS-KGGLV 66
            ++ L    +S V+++G+ GMGG+GKTT+A+  Y+ I   F+   F+++VRE SS + GLV
Sbjct: 300  VKLLNFKSTSGVQILGLYGMGGIGKTTLAKSFYNKIIVNFKHRVFIESVREKSSDQDGLV 359

Query: 67   SLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWF 126
            +LQ+ L+ +L  L    I +V  G++ +   +  KK ++V+DDV  + Q+ +L G  +W+
Sbjct: 360  NLQKTLIKELFGLVP-EIEDVSRGLEKIKENVHEKKTIVVLDDVDHIDQVNALVGETKWY 418

Query: 127  GSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP-LQECVQLSAR 185
            G GS I+IT+RD  +L    V++ Y+   L   +AL+LF+  + +  +P  Q  ++LS +
Sbjct: 419  GEGSLIVITTRDSEILSKLSVNQQYEVKCLTEPQALKLFSFYSLRKEKPPTQSLLELSKK 478

Query: 186  IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
            I    G LPLA++V GS L  +  +EW   LE+L    P ++  +L +SF+ L + EKKI
Sbjct: 479  IAEVTGLLPLAVKVFGSHLYDKDENEWPVELEKLTNTQPDKLHCVLALSFESLDDEEKKI 538

Query: 246  FLDIACFFKGND--RDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELG 302
            FLDIAC F   +  +D + + L+GCGF+    +RVLI+K L+T+  ++TLWMHD ++++G
Sbjct: 539  FLDIACLFLKMEITKDELVDILKGCGFNAEAALRVLIQKSLVTIMTDDTLWMHDQIRDMG 598

Query: 303  QQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD----------------- 345
            +Q+V R+  ++   RSRLW   E+ +VL    GT  + GIV D                 
Sbjct: 599  RQMVLRECSDDPEMRSRLWDRGEIMNVLDYMKGTSSIRGIVFDFKKKFVRDPTADEIVSR 658

Query: 346  ------------NYHHENEVYLCASAK-----------AFSKMTNLRLLKICNLQLPNGL 382
                        NY     +   A  K            F  M  LRLL+I N++L   L
Sbjct: 659  NLRNNPGINSVCNYLRNIFIRFPAEEKPKRSEITIPVEPFVPMKKLRLLQINNVELEGNL 718

Query: 383  EYLSNRLRLLGWRGYPLKFLPSNLQMDK--TIEIYMCYSRIGELWKGIKHLDKLKVMILS 440
            + L + L+ + W+G PL+ LP ++   +   +++     R  +  +  K  + LKV+ L 
Sbjct: 719  KLLPSELKWIQWKGCPLENLPPDILARQLGVLDLSESGVRRVQTLRSKKGDENLKVVNLR 778

Query: 441  HSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKIL 500
               +L  +PD +    LEKL+LE C  L ++H S+    KL+ L+++ C+S         
Sbjct: 779  GCHSLEAIPDLSNHIALEKLVLERCNLLVKVHRSVGNLGKLLQLDLRRCSS--------- 829

Query: 501  MKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLP 560
                    L      +SGLKCL  L ++G       PE +  M  L EL L+GTAI  LP
Sbjct: 830  --------LSEFLVDVSGLKCLEKLFLTGCSNLSVLPENIGSMPLLKELLLDGTAISNLP 881

Query: 561  LSIELLSGLVLLNLKNCRS-----------------------LEILPVTVSNLKCLRSLK 597
             SI  L  L  L+L  CRS                       L  LP+++ +LK L+ L 
Sbjct: 882  DSIFRLQKLEKLSLMGCRSIQELPSCIGKLTSLEDLYLDDTALRNLPISIGDLKNLQKLH 941

Query: 598  LSGCSKLKKFPEIVRSMKDLSELFLDGTSI------------------------KEVPSS 633
            L  C+ L K P+ +  +  L ELF++G+++                        K+VPSS
Sbjct: 942  LMRCTSLSKIPDSINKLISLKELFINGSAVEELPLDTGSLLCLKDLSAGDCKFLKQVPSS 1001

Query: 634  I--------------------------ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL 667
            I                            + KLEL+N   CK L RLP+SI  + +L +L
Sbjct: 1002 IGGLNSLLQLQLNGTPIEALPKEIGALHFIRKLELIN---CKFLKRLPNSIGDMDTLYSL 1058

Query: 668  NLSGCFKLENVPETLGQIESLEELDISGTAV----PHS-------------TSWYSYIPI 710
            NL G   +E +PE  G++E+L EL +S   +    P S              +  + +P 
Sbjct: 1059 NLVGS-NIEELPEDFGKLENLVELRMSNCKMLKRLPKSFGDLKSLHRLYMQETSVAELPD 1117

Query: 711  NL---------------MRKSVALKLP-------------SLSGLCSLRKLNLTDCNLME 742
            N                +R+S   + P             S S L SL +L+     +  
Sbjct: 1118 NFGNLSNLMVLKMLKKPLRRSSESEAPGTSEEPRFVELPHSFSNLLSLEELDARSWRI-S 1176

Query: 743  GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
            G +  D+  L SL  L L  N F SLP+S+  LS L  + L DC+ L+ LP LP  + Q+
Sbjct: 1177 GKMRDDLEKLSSLMILNLGNNYFHSLPSSLVGLSNLKELLLCDCRELKGLPPLPWKLEQL 1236

Query: 803  RVNGCASLVTLLDALKL-CKSDSTMIACLDSLKLLG---------------NKSLAFSML 846
             +  C SL ++ D  KL    +  +  C+  + + G               N S +F   
Sbjct: 1237 NLENCFSLDSIFDLSKLKILHELNLTNCVKVVDIPGLEHLTALKKLYMSGCNSSCSFP-- 1294

Query: 847  REYLEAVSNTRQHLS---------VVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLV 897
            RE  + + N ++ LS         + +PG+ +P+WF   ++G      +P+     ++L 
Sbjct: 1295 RE--DFIHNVKKRLSKASLKMLRNLSLPGNRVPDWF---SQGPVTFSAQPN-----RELR 1344

Query: 898  GYAICCVFHVLKNSRGNNCFG-------SYPTHQLNCHI-GHGIYGIGFRDKFGQAGSDH 949
            G  I  V   LK+ + ++ +            H+L+ HI  H +   G   K        
Sbjct: 1345 G-VILAVVVALKHKKEDDEYQLPDVLEVQAQIHKLDHHICTHTLQLSGVPRKSDDQ---- 1399

Query: 950  LWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVY 1002
               L++ R + +    PL + L+   +  V +   P + +G+E+KM G+H VY
Sbjct: 1400 ---LHICRYSGFH---PLVTMLKDGYTIQV-IKRNPPIKKGVELKMHGIHLVY 1445


>gi|227438249|gb|ACP30614.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1309

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 355/1177 (30%), Positives = 573/1177 (48%), Gaps = 210/1177 (17%)

Query: 1    MDSRCEKLRFLMD-SGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            ++SR + L  L+D   +SDV+++G+ GMGG+GKTT+A+  Y+ I  +FE   F+ NVRE 
Sbjct: 72   LESRVDDLINLVDVKSTSDVQILGLHGMGGIGKTTLAKAFYNKIVADFEHRVFISNVRER 131

Query: 60   SSK-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            SS   GLV+LQ+ L+  LL+ +   I +V  G D +   +  KK+L+V+DDV  V Q+ +
Sbjct: 132  SSDHDGLVNLQKSLIKGLLR-SLPEIEDVNRGRDKIRESVYEKKILVVLDDVDKVDQVDA 190

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            L G + W+  GS I+IT+RDE +L    V + Y+   LN ++AL+LF+  + +  +P + 
Sbjct: 191  LVGEKSWYSEGSLIVITTRDEDILSKVLVKQKYEVRCLNEEQALKLFSYHSLRKEKPTES 250

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFL-SGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
             ++LS +I++ +G LPLALEV GS L   +   EW++ LE+L+   P  + D+L++SFD 
Sbjct: 251  LLELSKKIVKISGLLPLALEVFGSLLYDKKEAKEWQTQLEKLKNTQPGNLQDVLKLSFDS 310

Query: 238  LQELEKKIFLDIACFFKGND--RDYVTNFLEGCGFHPVIGIRVLIEKCLIT-VHNNTLWM 294
            L + EK +FLDIAC F      ++ + + L GCGF+    + VL +K L+  + +  LWM
Sbjct: 311  LDDEEKNVFLDIACLFLKMQIKKEEIVDVLNGCGFNAEAALSVLRQKSLVKFLSDENLWM 370

Query: 295  HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD--------- 345
            HD ++++G+Q+  +++P +   RSRLW   E+  VL    GT  ++GIVLD         
Sbjct: 371  HDQIRDMGRQLDLKETPGDTRMRSRLWDRAEIMTVLNNMKGTSSIQGIVLDFKKKLATDP 430

Query: 346  --------NYHHENEVYLCAS-----------------------AKAFSKMTNLRLLKIC 374
                    N H    +    S                        + F  MT LRLL+I 
Sbjct: 431  SADNIALGNLHDNPGIRAVFSYLKNKFVGFPAEEKPKSSENTIPVEPFVPMTKLRLLQIN 490

Query: 375  NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWK-GIKHLD- 432
            +++L   LE L + L+ + WRG PLK +P NL   +   + +  S I  +    I+ +D 
Sbjct: 491  HVELAGNLERLPSELKWIQWRGCPLKEVPLNLLARQLAVLDLAESAIRRIQSLHIEGVDG 550

Query: 433  KLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSL 492
             LKV+ L    +L  +PD +    LEKL+ E C RL E+  S+     L+ L++++C +L
Sbjct: 551  NLKVVNLRGCHSLEAVPDLSNHKFLEKLVFERCMRLVEVPSSVGNLRTLLHLDLRNCPNL 610

Query: 493  ITLPGKIL-MKSLEKL------NLKSLPTTISGLKCLST--LDVSGDLKFREFPEIVEHM 543
                  +  +KSLEKL      +L  LP  I  + CL    LD +G    +E P+ +  +
Sbjct: 611  TEFLVDVSGLKSLEKLYLSGCSSLSVLPENIGLMPCLKELFLDATG---IKELPDSIFRL 667

Query: 544  EHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
            E+L +L L+   +I+ LP+ I  L+ L  L+L +  SL+ LP ++ +LK L+ L L  C+
Sbjct: 668  ENLQKLSLKSCRSIQELPMCIGTLTSLEELDLSST-SLQSLPSSIGDLKNLQKLSLMHCA 726

Query: 603  KLKKFPEIVRSMKDLSELFLDGTSIKE------------------------VPSSI---E 635
             L K P+ ++ +K L +LF+ G++++E                        VPSSI    
Sbjct: 727  SLSKIPDTIKELKSLKKLFIYGSAVEELPLCLGSLPCLTDFSAGECKLLKHVPSSIGGLN 786

Query: 636  LLTKLEL--------------------LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
             L +LEL                    L L +CK+L  LP SI  + +L +L L+G   +
Sbjct: 787  SLLELELDWTPIETLPAEIGDLHFIQKLGLRNCKSLKALPESIGNMDTLHSLFLTGA-NI 845

Query: 676  ENVPETLGQIESLEELDISGTAV----PHSTSWYSYIPINLMRKSVALKLP-SLSGLCSL 730
            E +PET G++E+L+ L +    +    P S      +    M+++  ++LP S   L +L
Sbjct: 846  EKLPETFGKLENLDTLRMDNCKMIKRLPESFGDLKSLHDLYMKETSVVELPESFGNLSNL 905

Query: 731  RKLNL-----------------------TDCNLME------------GALPSDIGNLCSL 755
            R L +                       +  NL+             G +P D+G L SL
Sbjct: 906  RVLKILKKPLFRSSPGTSEEPSFVEVPNSFSNLLSLEEIDAKGWGIWGKVPDDLGKLSSL 965

Query: 756  KELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLD 815
            K+L L  N F SLP+S+  L  L    L DC+ L+ LP LP  + ++ +  C +L ++ D
Sbjct: 966  KKLELGNNYFHSLPSSLEGLWNLKLFTLYDCQELKCLPPLPWKLEKLNLANCFALESIAD 1025

Query: 816  ALKL----------CK--SDSTMIACLDSLKLLG----NKSLAFSMLREYLEAVSNTRQH 859
              KL          C    D   +  L +LK L     N  L+ ++ +   +A     ++
Sbjct: 1026 LSKLEILEELNLTNCGKVDDVPGLEHLKALKRLYMSGCNSRLSVAVKKRLSKASLKMMRN 1085

Query: 860  LSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGS 919
            LS  +PG+ IP+WF   ++G      +P+     ++L G  +  V  +       +C   
Sbjct: 1086 LS--LPGNRIPDWF---SQGPLTFSPQPN-----RELRGVILAVVVAL-----NQDCIDD 1130

Query: 920  YP--------------THQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRL 965
            Y                  L  H  H ++G+       +   D    L++ R   Y    
Sbjct: 1131 YQLPDVMEVQAQILELDSPLYTHTLH-LFGV------PRTSDDQ---LHICR---YPTLH 1177

Query: 966  PLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVY 1002
            P+        +  V V  EP + QG+E+KM G+H VY
Sbjct: 1178 PMVWTFRDGYTIQV-VKREPPIKQGVELKMHGIHLVY 1213


>gi|15223444|ref|NP_174038.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332192670|gb|AEE30791.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1556

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 334/1191 (28%), Positives = 569/1191 (47%), Gaps = 188/1191 (15%)

Query: 8    LRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASG-FLDNVREISS-KGGL 65
            ++      SS ++++G+ GMGG+GKTT+A+  Y+ I   F     F+++VR  SS + GL
Sbjct: 373  MKLFNTESSSGIQVMGLYGMGGIGKTTLAKAFYNKIIVNFNRHRVFIESVRGKSSDQDGL 432

Query: 66   VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
            V+LQ+ L+ +L +L    I +V  G++ +   +  KK+++V+DDV  + Q+ +L G   W
Sbjct: 433  VNLQKTLIKELFRLVP-EIEDVSIGLEKIKENVHEKKIIVVLDDVDHIDQVNALVGETSW 491

Query: 126  FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP-LQECVQLSA 184
            +G GS I+IT+RD  +L    V++ Y+   L   +AL+LF+  + +  +P  Q  ++LS 
Sbjct: 492  YGEGSLIVITTRDSEILSKLSVNQQYEVKCLTEPQALKLFSFYSLRKEKPPTQGLLELSK 551

Query: 185  RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKK 244
            +I    G LPLA++V GS    +  +EW+  LE+L+ +   ++  +L +SF  L E EKK
Sbjct: 552  KIAEVTGLLPLAVKVFGSHFYDKDENEWQVELEKLKTQQ-DKLHGVLALSFKSLDEEEKK 610

Query: 245  IFLDIACFFKGND--RDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQEL 301
            IFLDIAC F   D  ++ V + L+GCG +    +RVLI+K L+T+  ++TLWMHD ++++
Sbjct: 611  IFLDIACLFLKMDITKEEVVDILKGCGLNAEAALRVLIQKSLLTILTDDTLWMHDQIRDM 670

Query: 302  GQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD------NYHHENEVY- 354
            G+Q+V ++S ++   RSRLW   E+ +VL    GT  + GIVLD        H  +E++ 
Sbjct: 671  GRQMVHKESSDDPEMRSRLWDRGEIMNVLDYMKGTSSIRGIVLDFNKKFARDHTADEIFS 730

Query: 355  ---------------------------------LCASAKAFSKMTNLRLLKICNLQLPNG 381
                                             +    ++F+ M  LRLL+I N++L   
Sbjct: 731  SNLRNNPGIYSVFNYLKNKLVRFPAEEKPKRSEITIPVESFAPMKKLRLLQINNVELEGD 790

Query: 382  LEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS---RIGELWKGIKHLDKLKVMI 438
            L+ L + L+ + W+G+PL+ LP ++   +   + +  S   R+  L +  +  + LKV+ 
Sbjct: 791  LKLLPSELKWIQWKGFPLENLPPDILSRQLGVLDLSESGVRRVKTLPRK-RGDENLKVVN 849

Query: 439  LSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGK 498
            L     L  +PD +    LEKL+LE C  L ++  S+    KL+ L+++ C+SL    G 
Sbjct: 850  LRGCHGLEAIPDLSNHNALEKLVLERCNLLVKVPRSVGNLGKLLQLDLRRCSSLSEFLGD 909

Query: 499  IL-MKSLEKL------NLKSLPTTISGLKCLSTLDVSGDL-------------------- 531
            +  +K LEK       NL  LP  I  + CL  L + G                      
Sbjct: 910  VSGLKCLEKFFLSGCSNLSVLPENIGSMPCLKELLLDGTAISNLPYSIFRLQKLEKLSLM 969

Query: 532  ---KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS 588
                  E P  V ++  L +L+L+ TA+R LP SI  L  L  L+L  C SL  +P T++
Sbjct: 970  GCRSIEELPSCVGYLTSLEDLYLDDTALRNLPSSIGDLKNLQKLHLMRCTSLSTIPETIN 1029

Query: 589  NLKCLRSLKLSG-----------------------CSKLKKFPEIVRSMKDLSELFLDGT 625
             L  L+ L ++G                       C  LK+ P  +  +  L +L LD T
Sbjct: 1030 KLMSLKELFINGSAVEELPIETGSLLCLTDLSAGDCKFLKQVPSSIGGLNSLLQLQLDST 1089

Query: 626  SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI 685
             I+ +P  I  L  +  L+L +CK+L  LP +I  + +L +LNL G   +E +PE  G++
Sbjct: 1090 PIEALPEEIGDLHFIRQLDLRNCKSLKALPKTIGKMDTLYSLNLVGS-NIEELPEEFGKL 1148

Query: 686  ESLEELDISGTAV----PHSTSWYSYIPINLMRKSVALKLP----SLSGLCSLRKLN--- 734
            E+L EL ++   +    P S      +    M++++  +LP    +LS L  L  L    
Sbjct: 1149 ENLVELRMNNCKMLKRLPKSFGDLKSLHRLYMQETLVAELPESFGNLSNLMVLEMLKKPL 1208

Query: 735  --LTDCNL-------------------------------MEGALPSDIGNLCSLKELYLS 761
              +++ N+                               + G +P D+  L  L +L L 
Sbjct: 1209 FRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISGKIPDDLEKLSCLMKLNLG 1268

Query: 762  KNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCK 821
             N F SLP+S+  LS L  + L DC+ L+ LP LP  + Q+ +  C SL ++ D  +L  
Sbjct: 1269 NNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSDLSELTI 1328

Query: 822  -SDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSN-----TRQHLS---------VVVPG 866
             +D  +  C   + + G + L  ++ R Y+   ++      ++ LS         + +PG
Sbjct: 1329 LTDLNLTNCAKVVDIPGLEHLT-ALKRLYMTGCNSNYSLAVKKRLSKASLKMMRNLSLPG 1387

Query: 867  SEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLN 926
            + +P+WF   ++G      +P+     ++L G  I  V   L +   ++ +      ++ 
Sbjct: 1388 NRVPDWF---SQGPVTFSAQPN-----RELRGVIIAVVV-ALNDETEDDDYQLPDVMEVQ 1438

Query: 927  CHI----GHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVS 982
              I     H            +  +D    L++ R + +    PL + L+   +  V + 
Sbjct: 1439 AQIHKLDHHKCTNTLHLSGVPRTNNDQ---LHICRYSAFH---PLVTMLKDGYTIQV-IK 1491

Query: 983  FEPWLGQGLEVKMCGLHPVYM--DEVEELDQTTNQPSRFTVYNLNEFDQHF 1031
              P + QG+E+KM G+H VY   D++E  + T  +  +     L  F   F
Sbjct: 1492 RNPPIKQGVELKMHGIHLVYEGDDDLEGRENTLPEAQQTVSQKLANFFSSF 1542


>gi|357478623|ref|XP_003609597.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
 gi|355510652|gb|AES91794.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
          Length = 1350

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/566 (40%), Positives = 336/566 (59%), Gaps = 42/566 (7%)

Query: 1   MDSRCEKLRFLMD-SGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR + +  L++   S DV ++GI GMGG+GKTTIA+ +Y+ I  +F+   FL N+RE 
Sbjct: 393 VESRVDAVTKLLNIQNSEDVLLLGIWGMGGVGKTTIAKAIYNQIGRKFDGRSFLLNIREF 452

Query: 60  -SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
             +    VSLQ+Q+L  + K     I ++  G ++L  RL + +VLLV+DDV ++ QL++
Sbjct: 453 CETDANHVSLQQQILCDVYKTTAFKIRDIESGKNILKERLAQNRVLLVLDDVNELDQLKA 512

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G+REWFG GSRIIIT+RD HLL++  VD VY    ++  E+L+LF+  AFK   P + 
Sbjct: 513 LCGSREWFGPGSRIIITTRDMHLLRSSRVDLVYTIEEMDESESLELFSWHAFKQPSPAEG 572

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
               S  +I Y+G LPLALEVLG +LS   + EW+  LE+L+  P  E+   L + ++G+
Sbjct: 573 FATHSTDVIAYSGRLPLALEVLGCYLSDCEITEWQKVLEKLKCIPHDEVQKNLFLDWNGI 632

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDL 297
           + ++ KI                   L GCGF   IGI+VL+E+ L+TV N N L MHDL
Sbjct: 633 KMMQIKI-------------------LNGCGFFADIGIKVLVERSLVTVDNRNKLRMHDL 673

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           L+++G+QI+  +SP +   RSRLW+ EEV  VL +  GTE V+G+ L  +  +N+V  C 
Sbjct: 674 LRDMGRQIIYEESPFDPENRSRLWRREEVYDVLLKQKGTEAVKGLAL-VFPRKNKV--CL 730

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
           + KAF KM  LRLL++  +QL    +YLS  LR L W G+PL + P+  Q    I I + 
Sbjct: 731 NTKAFKKMNKLRLLQLSGVQLNGDFKYLSGELRWLYWHGFPLTYTPAEFQQGSLIVIQLK 790

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
           YS + ++WK  + L  LK++ LSHS +L   PDF+  PNLEKL+L+ C  L  +  S+  
Sbjct: 791 YSNLKQIWKEGQMLKNLKILNLSHSLDLTETPDFSYMPNLEKLVLKDCPSLSTVSHSIGS 850

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
            +KL+++N+ DC                 + L+ LP +I  LK L TL +SG     +  
Sbjct: 851 LHKLLLINLTDC-----------------IRLRKLPRSIYKLKSLETLILSGCSMIDKLE 893

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSI 563
           E +E ME L+ L  + TAI  +P SI
Sbjct: 894 EDLEQMESLTTLIADKTAITKVPFSI 919



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 64/152 (42%), Positives = 90/152 (59%), Gaps = 3/152 (1%)

Query: 162 LQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLE- 220
           L  FN  AF      Q   +LS +++ Y+ GLPLAL+ LG FL G+   EW+  L+ LE 
Sbjct: 53  LSFFNWGAFSQATTPQGFSELSRQLVAYSKGLPLALKALGEFLHGKDALEWKRVLKSLER 112

Query: 221 -IEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVL 279
              P  E+L  L+ SFD L++ EK IFLDIACFF G D++YV   +        + I +L
Sbjct: 113 FSFPDQEVLQALETSFDDLKDEEKHIFLDIACFFNGMDQNYVLRTINRSTQCTSLQISLL 172

Query: 280 IEKCLITV-HNNTLWMHDLLQELGQQIVQRQS 310
            +K L+T+  NN L MH LLQ + + I++R+S
Sbjct: 173 EDKSLLTIGENNKLEMHGLLQAMARDIIKRES 204



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 71/126 (56%), Gaps = 9/126 (7%)

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDC 648
           LK L+ L LS    L + P+    M +L +L L D  S+  V  SI  L KL L+NL+DC
Sbjct: 804 LKNLKILNLSHSLDLTETPDF-SYMPNLEKLVLKDCPSLSTVSHSIGSLHKLLLINLTDC 862

Query: 649 KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI 708
             L +LP SI  LKSL+TL LSGC  ++ + E L Q+ESL  L    TA+       + +
Sbjct: 863 IRLRKLPRSIYKLKSLETLILSGCSMIDKLEEDLEQMESLTTLIADKTAI-------TKV 915

Query: 709 PINLMR 714
           P +++R
Sbjct: 916 PFSIVR 921


>gi|10121909|gb|AAG13419.1|AC000348_16 T7N9.24 [Arabidopsis thaliana]
          Length = 1590

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 333/1192 (27%), Positives = 567/1192 (47%), Gaps = 190/1192 (15%)

Query: 8    LRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASG-FLDNVREISS-KGGL 65
            ++      SS ++++G+ GMGG+GKTT+A+  Y+ I   F     F+++VR  SS + GL
Sbjct: 407  MKLFNTESSSGIQVMGLYGMGGIGKTTLAKAFYNKIIVNFNRHRVFIESVRGKSSDQDGL 466

Query: 66   VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
            V+LQ+ L+ +L +L    I +V  G++ +   +  KK+++V+DDV  + Q+ +L G   W
Sbjct: 467  VNLQKTLIKELFRLVP-EIEDVSIGLEKIKENVHEKKIIVVLDDVDHIDQVNALVGETSW 525

Query: 126  FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP-LQECVQLSA 184
            +G GS I+IT+RD  +L    V++ Y+   L   +AL+LF+  + +  +P  Q  ++LS 
Sbjct: 526  YGEGSLIVITTRDSEILSKLSVNQQYEVKCLTEPQALKLFSFYSLRKEKPPTQGLLELSK 585

Query: 185  RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKK 244
            +I    G LPLA++V GS    +  +EW+  LE+L+ +   ++  +L +SF  L E EKK
Sbjct: 586  KIAEVTGLLPLAVKVFGSHFYDKDENEWQVELEKLKTQQ-DKLHGVLALSFKSLDEEEKK 644

Query: 245  IFLDIACFFKGND--RDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQEL 301
            IFLDIAC F   D  ++ V + L+GCG +    +RVLI+K L+T+  ++TLWMHD ++++
Sbjct: 645  IFLDIACLFLKMDITKEEVVDILKGCGLNAEAALRVLIQKSLLTILTDDTLWMHDQIRDM 704

Query: 302  GQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD------NYHHENEVY- 354
            G+Q+V ++S ++   RSRLW   E+ +VL    GT  + GIVLD        H  +E++ 
Sbjct: 705  GRQMVHKESSDDPEMRSRLWDRGEIMNVLDYMKGTSSIRGIVLDFNKKFARDHTADEIFS 764

Query: 355  ---------------------------------LCASAKAFSKMTNLRLLKICNLQLPNG 381
                                             +    ++F+ M  LRLL+I N++L   
Sbjct: 765  SNLRNNPGIYSVFNYLKNKLVRFPAEEKPKRSEITIPVESFAPMKKLRLLQINNVELEGD 824

Query: 382  LEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS---RIGELWKGIKHLDKLKVMI 438
            L+ L + L+ + W+G+PL+ LP ++   +   + +  S   R+  L +  +  + LKV+ 
Sbjct: 825  LKLLPSELKWIQWKGFPLENLPPDILSRQLGVLDLSESGVRRVKTLPRK-RGDENLKVVN 883

Query: 439  LSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGK 498
            L     L  +PD +    LEKL+LE C  L ++  S+    KL+ L+++ C+SL    G 
Sbjct: 884  LRGCHGLEAIPDLSNHNALEKLVLERCNLLVKVPRSVGNLGKLLQLDLRRCSSLSEFLGD 943

Query: 499  IL-MKSLEKL------NLKSLPTTISGLKCLSTLDVSGDL-------------------- 531
            +  +K LEK       NL  LP  I  + CL  L + G                      
Sbjct: 944  VSGLKCLEKFFLSGCSNLSVLPENIGSMPCLKELLLDGTAISNLPYSIFRLQKLEKLSLM 1003

Query: 532  ---KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS 588
                  E P  V ++  L +L+L+ TA+R LP SI  L  L  L+L  C SL  +P T++
Sbjct: 1004 GCRSIEELPSCVGYLTSLEDLYLDDTALRNLPSSIGDLKNLQKLHLMRCTSLSTIPETIN 1063

Query: 589  NLKCLRSLKLSG-----------------------CSKLKKFPEIVRSMKDLSELFLDGT 625
             L  L+ L ++G                       C  LK+ P  +  +  L +L LD T
Sbjct: 1064 KLMSLKELFINGSAVEELPIETGSLLCLTDLSAGDCKFLKQVPSSIGGLNSLLQLQLDST 1123

Query: 626  SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI 685
             I+ +P  I  L  +  L+L +CK+L  LP +I  + +L +LNL G   +E +PE  G++
Sbjct: 1124 PIEALPEEIGDLHFIRQLDLRNCKSLKALPKTIGKMDTLYSLNLVGS-NIEELPEEFGKL 1182

Query: 686  ESLEELDISGTAV----PHSTSWYSYIPINLMRKSVALKLP----SLSGLCSLRKLN--- 734
            E+L EL ++   +    P S      +    M++++  +LP    +LS L  L  L    
Sbjct: 1183 ENLVELRMNNCKMLKRLPKSFGDLKSLHRLYMQETLVAELPESFGNLSNLMVLEMLKKPL 1242

Query: 735  --LTDCNL-------------------------------MEGALPSDIGNLCSLKELYLS 761
              +++ N+                               + G +P D+  L  L +L L 
Sbjct: 1243 FRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISGKIPDDLEKLSCLMKLNLG 1302

Query: 762  KNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCK 821
             N F SLP+S+  LS L  + L DC+ L+ LP LP  + Q+ +  C SL ++ D  +L  
Sbjct: 1303 NNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSDLSELTI 1362

Query: 822  -SDSTMIACLDSLKLLG---------------NKSLAFSMLREYLEAVSNTRQHLSVVVP 865
             +D  +  C   + + G               N + + ++ +   +A     ++LS  +P
Sbjct: 1363 LTDLNLTNCAKVVDIPGLEHLTALKRLYMTGCNSNYSLAVKKRLSKASLKMMRNLS--LP 1420

Query: 866  GSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQL 925
            G+ +P+WF   ++G      +P+     ++L G  I  V   L +   ++ +      ++
Sbjct: 1421 GNRVPDWF---SQGPVTFSAQPN-----RELRGVIIAVVV-ALNDETEDDDYQLPDVMEV 1471

Query: 926  NCHI----GHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNV 981
               I     H            +  +D    L++ R + +    PL + L+   +  V +
Sbjct: 1472 QAQIHKLDHHKCTNTLHLSGVPRTNNDQ---LHICRYSAFH---PLVTMLKDGYTIQV-I 1524

Query: 982  SFEPWLGQGLEVKMCGLHPVYM--DEVEELDQTTNQPSRFTVYNLNEFDQHF 1031
               P + QG+E+KM G+H VY   D++E  + T  +  +     L  F   F
Sbjct: 1525 KRNPPIKQGVELKMHGIHLVYEGDDDLEGRENTLPEAQQTVSQKLANFFSSF 1576


>gi|154424272|gb|ABS82021.1| TAO1 [Arabidopsis thaliana]
          Length = 1140

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 295/895 (32%), Positives = 467/895 (52%), Gaps = 112/895 (12%)

Query: 18   DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVR---------EISSKGGLVSL 68
            +VRMIGI G  G+GKTTI+RV+Y+ + H+F+    +DN++         E S+K   + L
Sbjct: 233  EVRMIGIWGPAGIGKTTISRVLYNKLFHQFQLGAIIDNIKVRYPRPCHDEYSAK---LQL 289

Query: 69   QRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGS 128
            Q++LLSQ++   D     V   + +   RL+ KKVLLV+DDV  + QL ++A + +WFG 
Sbjct: 290  QKELLSQMINQKDM----VVPHLGVAQERLKDKKVLLVLDDVDGLVQLDAMAKDVQWFGL 345

Query: 129  GSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIR 188
            GSRII+ ++D  LLK HG+  +YK      DEAL++F M AF    P     Q++  +  
Sbjct: 346  GSRIIVVTQDLKLLKAHGIKYIYKVDFPTSDEALEIFCMYAFGEKSPKVGFEQIARTVTT 405

Query: 189  YAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLD 248
             AG LPL L V+GS+L   S  EW  ++ RL      +I  +L+ S++ L E EK +FL 
Sbjct: 406  LAGKLPLGLRVMGSYLRRMSKQEWAKSIPRLRTSLDDDIESVLKFSYNSLAEQEKDLFLH 465

Query: 249  IACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQR 308
            I CFF+    + +  FL         G+++L +K L++++   + MH+LL +LG  IV++
Sbjct: 466  ITCFFRRERIETLEVFLAKKSVDVRQGLQILADKSLLSLNLGNIEMHNLLVQLGLDIVRK 525

Query: 309  QSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNL 368
            QS  + GKR  L   E++C VLT+ TGT  + GI L+      E  +  S +AF +M NL
Sbjct: 526  QSIHKPGKRQFLVDTEDICEVLTDDTGTRTLIGIDLE-LSGVIEGVINISERAFERMCNL 584

Query: 369  RLLKI-------CN--LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
            + L+        C+  L LP GL ++S +LRLL W  YPL  LP     +  ++I M  S
Sbjct: 585  QFLRFHHPYGDRCHDILYLPQGLSHISRKLRLLHWERYPLTCLPPKFNPEFLVKINMRDS 644

Query: 420  RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
             + +LW G + +  LK M LS   NL  +PDF+ A NL++L L  C  L E+  S+    
Sbjct: 645  MLEKLWDGNEPIRNLKWMDLSFCVNLKELPDFSTATNLQELRLINCLSLVELPSSIGNVT 704

Query: 480  KLIILNMKDCTSLITLPGKI-LMKSLEKL------NLKSLPTTISGLKCLSTLDVSGDLK 532
             L+ L++ DC+SL+ LP  I  + +L+KL      +L  LP++   +  L  L++SG   
Sbjct: 705  NLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLVKLPSSFGNVTSLKELNLSGCSS 764

Query: 533  FREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
              E P  + ++ +L +L+ +G +++  LP SI   + L  L+L NC SL   P ++ NL 
Sbjct: 765  LLEIPSSIGNIVNLKKLYADGCSSLVQLPSSIGNNTNLKELHLLNCSSLMECPSSMLNLT 824

Query: 592  CLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKN 650
             L  L LSGC  L K P I  ++ +L  L+L D +S+ E+P +IE  T L+ L L  C N
Sbjct: 825  RLEDLNLSGCLSLVKLPSI-GNVINLQSLYLSDCSSLMELPFTIENATNLDTLYLDGCSN 883

Query: 651  LVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPI 710
            L+ LPSSI  + +L++L L+GC  L+ +P  +    +L+ L                   
Sbjct: 884  LLELPSSIWNITNLQSLYLNGCSSLKELPSLVENAINLQSL------------------- 924

Query: 711  NLMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLP 769
            +LM+ S  ++LP S+  + +L  L++++C+              SL EL L         
Sbjct: 925  SLMKCSSLVELPSSIWRISNLSYLDVSNCS--------------SLVELNL--------- 961

Query: 770  TSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIAC 829
              ++H                  P +P ++  +    C SLV  LD              
Sbjct: 962  --VSH------------------PVVPDSL-ILDAGDCESLVQRLDCF------------ 988

Query: 830  LDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
              + K++ N +  F + +E  + +  T    + ++PG ++P +F Y+  G S+TV
Sbjct: 989  FQNPKIVLNFANCFKLNQEARDLIIQTSACRNAILPGEKVPAYFTYRATGDSLTV 1043


>gi|357474813|ref|XP_003607692.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508747|gb|AES89889.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1181

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 249/646 (38%), Positives = 366/646 (56%), Gaps = 70/646 (10%)

Query: 1   MDSRCEKLR--FLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE 58
           M+S  +K+    L+DS   DVR++GICGMGG+GKTT+A  +Y  ISH+F+A  F+D++ +
Sbjct: 256 MNSHIDKVANLLLLDS-IDDVRVVGICGMGGIGKTTLATALYGQISHQFDARCFIDDLSK 314

Query: 59  ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
           I    G V  Q+Q+L Q L +    + N++   D++  RL+R +VL+++D+V  V QL  
Sbjct: 315 IYRHDGQVGAQKQILHQTLGVEPFQLCNLYHTTDLMRRRLRRLRVLIIVDNVDKVGQLDK 374

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L  NREW G+GSRIII S DEH+LK +GVD VY+   LN+  +LQLF++KAFK Y  + +
Sbjct: 375 LGVNREWLGAGSRIIIISGDEHILKEYGVDVVYRVPLLNWTNSLQLFSLKAFKLYHIISD 434

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             +L+  I+ YA GLPLA+ VLGS L  RS+ EWRS L +L++ P  +I+D+LQ+S  GL
Sbjct: 435 YEELTYDILNYANGLPLAITVLGSSLFSRSISEWRSELTKLKVSPHKDIMDVLQLSLIGL 494

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT-LWMHDL 297
            E+EK+IFL IACFF G + DYV N L  CGFH  IG+RVL++  LI + + + + MH L
Sbjct: 495 MEMEKEIFLHIACFFNGREEDYVKNVLNYCGFHADIGLRVLVDNSLIHISDESKIEMHGL 554

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
            + LG+ IV   S     K SRLW  E+  +V++ +     VE +VL    +E  + +  
Sbjct: 555 FEVLGKNIVHEIS----RKWSRLWLHEQFYNVVSNNMEIN-VEAVVLYGPGNEKGILMAE 609

Query: 358 S-----------------------------------------AKAFSKMTNLRLLKICNL 376
           +                                         A+A SKM +L LL +  +
Sbjct: 610 ALSKMNSLELLILKNVKVSGSLNYLSNKLRYLEWEAEKGILMAEALSKMNSLELLILKKV 669

Query: 377 QLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKV 436
           ++   L YLSN+LR L W  YP  +LPS+ Q+D+  E+ +  S I +LWK  K+L  L+ 
Sbjct: 670 KVSGSLNYLSNKLRYLEWDEYPFLYLPSSSQLDELSELILVGSSITQLWKDKKYLPNLRN 729

Query: 437 MILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLP 496
           + LS S+NL  MP F   PNL++L LEGC  L +I+ S+ L  +L+ LN+K+C +LI +P
Sbjct: 730 LDLSCSKNLATMPHFAEFPNLKRLNLEGCVSLVQINSSIGLLRELVFLNLKNCKNLICIP 789

Query: 497 GKIL-MKSLEKLNLKSLPTTISGLK-----------------CLSTLDVSGDLKFREFPE 538
            +I  + SL+   +     T    K                 CLS +D+S      + P+
Sbjct: 790 NEISGLTSLKYFTICGCSNTFKNSKAHGYFSSCLLPSLPSVSCLSEIDISF-CNLSQIPD 848

Query: 539 IVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
            +  +  L  L+L G     LP S+   S L  LNL++C+ L  LP
Sbjct: 849 ALGSLTWLERLNLRGNNFVTLP-SLRDHSRLEYLNLEHCKQLTSLP 893



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 143/560 (25%), Positives = 234/560 (41%), Gaps = 106/560 (18%)

Query: 477  LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
            L NKL  L  +    ++       M SLE L LK +   +SG    S   +S  L++ E+
Sbjct: 634  LSNKLRYLEWEAEKGILMAEALSKMNSLELLILKKV--KVSG----SLNYLSNKLRYLEW 687

Query: 537  PEI-------VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSN 589
             E           ++ LSEL L G++I  L    + L  L  L+L   ++L  +P   + 
Sbjct: 688  DEYPFLYLPSSSQLDELSELILVGSSITQLWKDKKYLPNLRNLDLSCSKNLATMP-HFAE 746

Query: 590  LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK 649
               L+ L L GC                        S+ ++ SSI LL +L  LNL +CK
Sbjct: 747  FPNLKRLNLEGC-----------------------VSLVQINSSIGLLRELVFLNLKNCK 783

Query: 650  NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIP 709
            NL+ +P+ I  L SLK   + GC       +  G   S                      
Sbjct: 784  NLICIPNEISGLTSLKYFTICGCSNTFKNSKAHGYFSSC--------------------- 822

Query: 710  INLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLP 769
                       LPSL  +  L +++++ CNL +  +P  +G+L  L+ L L  N+FV+LP
Sbjct: 823  ----------LLPSLPSVSCLSEIDISFCNLSQ--IPDALGSLTWLERLNLRGNNFVTLP 870

Query: 770  TSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIAC 829
            +   H S+L  + LE CK+L SLP+LP             L   +   K  ++   +  C
Sbjct: 871  SLRDH-SRLEYLNLEHCKQLTSLPELP-------------LPAAIKQDKHKRAGMFIFNC 916

Query: 830  LDSLKLLGNKSLAFSMLREYL-------EAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSI 882
             +    LG +    +M   ++       +  S +   + +V+PG+EIP+WF  +  G SI
Sbjct: 917  PE----LGEREQCINMTLSWMIHFIQGKQDSSASFHQIDIVIPGTEIPKWFNNRRMGRSI 972

Query: 883  TVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLN------CHIGHGIYGI 936
            ++  PS +     ++G A C VF V         +   P  +L        +  + +  +
Sbjct: 973  SID-PSPIVYDDNIIGIACCAVFSVELFDPTKTRYEWGPIIRLGFKSSNAANSNYVVIPV 1031

Query: 937  GFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQG--LEVK 994
                      S+H+WL+Y  R+  +     +++ L  +E +H+ +      GQG  LEVK
Sbjct: 1032 TLYRHLITVKSNHMWLIYFDRELFFSFLRSIDNTL--WELDHIKMEASVMNGQGLHLEVK 1089

Query: 995  MCGLHPVYMDEVEELDQTTN 1014
             CG   V+  + +  D   N
Sbjct: 1090 NCGFRWVFKQDQQPFDSPNN 1109


>gi|224131106|ref|XP_002328455.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838170|gb|EEE76535.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1150

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 314/926 (33%), Positives = 462/926 (49%), Gaps = 125/926 (13%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M SR + +  L+  GS+ V ++GI GMGG+GK+T A  VY     +FE   F  NVRE S
Sbjct: 99  MKSRVKDIDSLLSFGSTGVLIVGIWGMGGIGKSTTAEAVYHRNCSKFEGHCFFQNVREES 158

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            K G+  +++++L ++L+  D +I         +   LQRKKVL+V+DDV D + L+ L 
Sbjct: 159 QKHGIDHVRQEILGEVLEKKDMTIRTKVLP-PAIKRMLQRKKVLIVLDDVNDPQVLKYLL 217

Query: 121 GNREWFGSGSRIIITSRDEHLLKTH-GVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           G    FG GSRI++TSRD  +L      D++Y+   L  D+AL+LF++ AFK   P++  
Sbjct: 218 GEDGLFGQGSRIMVTSRDRQVLINECDEDKIYEVEILEEDDALRLFSLHAFKQNNPIEGY 277

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGR-SVDEWRSTLERLEIEPPSEILDILQISFDGL 238
           + LS  ++    G+PL LEVLG+ L  + SV+ W S + +L      E+   L++ +  L
Sbjct: 278 IGLSKTVVSCVKGVPLVLEVLGASLYRKTSVEYWESKVAQLRTNGCEEVKKCLEMCYHEL 337

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
           ++ EKKIFLDIACFF    RD++   L+        GI  LI+ CLI +  N +WMHD+L
Sbjct: 338 RDTEKKIFLDIACFFGRCKRDHLQQTLD---LEERSGIDRLIDMCLIKIVQNKIWMHDVL 394

Query: 299 QELGQQIVQRQS--PEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
            +LG++IV +++  P E   RSRLW+ +++  VLT       VE I L+      E+ L 
Sbjct: 395 VKLGKKIVHQENVDPRE---RSRLWQADDIYRVLTTQRTGSKVESISLNLLAITEEMIL- 450

Query: 357 ASAKAFSKMTNLRLLKI-------------------CNLQLPNGLEYLSNRLRLLGWRGY 397
            S  AF  M NLRLLKI                     + LP GL +LS+ LR L W  Y
Sbjct: 451 -SPTAFEGMYNLRLLKIYYPPFLKDPSKEQIMNGKRVGIHLPGGLHFLSSELRFLYWYNY 509

Query: 398 PLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNL 457
           PLK +PSN    K  ++ M  S++ + W   + L+ LK+M    S+  +   D    P+L
Sbjct: 510 PLKSMPSNFFPKKPFQLEMPCSQLEQFWNEYQPLEILKLMNPPSSKPSLIDSDLFKVPHL 569

Query: 458 EKL------ILEGCTRL-----------YEIHPSLLLHNKLIILNMKDCTSLITLPGKI- 499
           E L       ++  TRL           Y +  S+   ++L+ LN+  C SL +LP  I 
Sbjct: 570 EVLHPGIPSSIKYSTRLTTLELPRLESFYTLPSSIGCLSQLVRLNLSSCESLASLPDNID 629

Query: 500 LMKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG 553
            +KSL +L+      L SLP +I  LKCL+ L+++        P+ +  +  L EL L  
Sbjct: 630 ELKSLVELDLYSCSKLASLPNSICKLKCLTKLNLA------SLPDSIGELRSLEELDLSS 683

Query: 554 -TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR-----------SLKLSGC 601
            + +  LP SI  L  L  L+L  C  L  LP  +  LK L+           S  L+GC
Sbjct: 684 CSKLASLPNSIGELKSLQWLDLNGCSGLASLPDNIGELKSLQWFDLNGCFGLASFDLNGC 743

Query: 602 SKLKKFPEIVRSMKDLSELFLDGTS---------------------IKEVPSSIELLTKL 640
           S L   P  + ++K L  LFL   S                     +  +P SI  L  L
Sbjct: 744 SGLASLPSSIGALKSLKSLFLRVASQQDSIDELESLKSLIPSGCLGLTSLPDSIGALKSL 803

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
           E L  S C  L  LP +I +LKSLK+L L GC  L ++ + +G+++SLE+L+++G     
Sbjct: 804 ENLYFSGCSGLASLPDNIGSLKSLKSLTLHGCSGLASLQDRIGELKSLEKLELNGCL--- 860

Query: 701 STSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
                + +P N            +  L SL+ L L  C+ +  +LP  IG L SLK+LYL
Sbjct: 861 ---GLASLPDN------------IGTLKSLKWLKLDGCSGL-ASLPDRIGELKSLKQLYL 904

Query: 761 SKNS-FVSLPTSITHLSKLLNIELEDCKRLQSLPQ---LPPNIRQVRVNGCASLVTLLDA 816
           +  S   SL  +I  L  L  + L  C  L SLP       ++  + +NGC+ L +L D 
Sbjct: 905 NGCSELASLTDNIGELKSLKQLYLNGCSGLASLPDRIGELKSLELLELNGCSGLASLPDT 964

Query: 817 LKLCKSDSTMIACLDSLKLLGNKSLA 842
           +   K       CL  L   G   LA
Sbjct: 965 IDALK-------CLKKLDFFGCSGLA 983



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 167/591 (28%), Positives = 254/591 (42%), Gaps = 118/591 (19%)

Query: 357  ASAKAFSKMTNLRLLKICNL-QLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI--- 412
            +S K  +++T L L ++ +   LP+ +  LS  +RL       L  LP N+   K++   
Sbjct: 578  SSIKYSTRLTTLELPRLESFYTLPSSIGCLSQLVRLNLSSCESLASLPDNIDELKSLVEL 637

Query: 413  EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGA-PNLEKLILEGCTRLYEI 471
            ++Y C S++  L   I  L  L  +      NL  +PD  G   +LE+L L  C++L  +
Sbjct: 638  DLYSC-SKLASLPNSICKLKCLTKL------NLASLPDSIGELRSLEELDLSSCSKLASL 690

Query: 472  HPSLLLHNKLIILNMKDCTSLITLPGKI-LMKSLEKLNLK-----------------SLP 513
              S+     L  L++  C+ L +LP  I  +KSL+  +L                  SLP
Sbjct: 691  PNSIGELKSLQWLDLNGCSGLASLPDNIGELKSLQWFDLNGCFGLASFDLNGCSGLASLP 750

Query: 514  TTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT-AIRGLPLSIELLSGLVLL 572
            ++I  LK L +L     L+     + ++ +E L  L   G   +  LP SI  L  L  L
Sbjct: 751  SSIGALKSLKSLF----LRVASQQDSIDELESLKSLIPSGCLGLTSLPDSIGALKSLENL 806

Query: 573  NLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT-SIKEVP 631
                C  L  LP  + +LK L+SL L GCS L    + +  +K L +L L+G   +  +P
Sbjct: 807  YFSGCSGLASLPDNIGSLKSLKSLTLHGCSGLASLQDRIGELKSLEKLELNGCLGLASLP 866

Query: 632  SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
             +I  L  L+ L L  C  L  LP  I  LKSLK L L+GC +L ++ + +G+++SL++L
Sbjct: 867  DNIGTLKSLKWLKLDGCSGLASLPDRIGELKSLKQLYLNGCSELASLTDNIGELKSLKQL 926

Query: 692  DISG----TAVP--------------HSTSWYSYIP------------------------ 709
             ++G     ++P              +  S  + +P                        
Sbjct: 927  YLNGCSGLASLPDRIGELKSLELLELNGCSGLASLPDTIDALKCLKKLDFFGCSGLAKLA 986

Query: 710  -----INLMRKSVALKLPSLSGLCSL----------RKLNLTDCNLMEGALPSDIGNLCS 754
                 I  ++    LKL   SGL SL          ++L L  C+ +  +L  +IG L S
Sbjct: 987  SLPDNIGTLKSLKWLKLDGCSGLASLPDRIGELKSLKQLYLNGCSEL-ASLTDNIGELKS 1045

Query: 755  LKELYLSKNS-FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL 813
            LK+LYL+  S   SLP  I  L  L  +EL  C  L SLP                    
Sbjct: 1046 LKQLYLNGCSGLASLPDRIGELKSLELLELNGCSGLASLPD------------------T 1087

Query: 814  LDALKLCKSDSTMIACLDSLKLLGN----KSLAFSMLREYLEAVSNTRQHL 860
            +DALK C        C     L  N    +SL FS +  +L    +T QHL
Sbjct: 1088 IDALK-CLKKLDFFGCSGLASLPNNIGELESLQFSFVLLFLRTSKSTGQHL 1137


>gi|154424270|gb|ABS82020.1| TAO1 [Arabidopsis thaliana]
          Length = 1140

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 294/895 (32%), Positives = 467/895 (52%), Gaps = 112/895 (12%)

Query: 18   DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVR---------EISSKGGLVSL 68
            +VRMIGI G  G+GKTTI+RV+Y+ + H+F+    +DN++         E S+K   + L
Sbjct: 233  EVRMIGIWGPAGIGKTTISRVLYNKLFHQFQLGAIIDNIKVRYPRPCHDEYSAK---LQL 289

Query: 69   QRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGS 128
            Q++LLSQ++   D     V   + +   RL+ KKVLLV+DDV  + QL ++A + +WFG 
Sbjct: 290  QKELLSQMINQKDM----VVPHLGVAQERLKDKKVLLVLDDVDGLVQLDAMAKDVQWFGL 345

Query: 129  GSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIR 188
            GSRII+ ++D  LLK HG+  +YK      DEAL++F M AF    P     Q++  +  
Sbjct: 346  GSRIIVVTQDLKLLKAHGIKYIYKVDFPTSDEALEIFCMYAFGEKSPKVGFEQIARTVTT 405

Query: 189  YAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLD 248
             AG LPL L V+GS+L   S  EW  ++ RL      +I  +L+ S++ L E EK +FL 
Sbjct: 406  LAGKLPLGLRVMGSYLRRMSKQEWAKSIPRLRTSLDDDIESVLKFSYNSLAEQEKDLFLH 465

Query: 249  IACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQR 308
            I CFF+    + +  FL         G+++L +K L++++   + MH+LL +LG  IV++
Sbjct: 466  ITCFFRRERIETLEVFLAKKSVDVRQGLQILADKSLLSLNLGNIEMHNLLVQLGLDIVRK 525

Query: 309  QSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNL 368
            QS  + GKR  L   E++C VLT+ TGT  + GI L+      E  +  S +AF +M NL
Sbjct: 526  QSIHKPGKRQFLVDTEDICEVLTDDTGTRTLIGIDLE-LSGVIEGVINISERAFERMCNL 584

Query: 369  RLLKI-------CN--LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
            + L+        C+  L LP GL ++S +LRLL W  YPL  LP     +  ++I M  S
Sbjct: 585  QFLRFHHPYGDRCHDILYLPQGLSHISRKLRLLHWERYPLTCLPPKFNPEFLVKINMRDS 644

Query: 420  RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
             + +LW G + +  LK M LS   NL  +PDF+ A NL++L L  C  L E+  S+    
Sbjct: 645  MLEKLWDGNEPIRNLKWMDLSFCVNLKELPDFSTATNLQELRLINCLSLVELPSSIGNAT 704

Query: 480  KLIILNMKDCTSLITLPGKI-LMKSLEKL------NLKSLPTTISGLKCLSTLDVSGDLK 532
             L+ L++ DC+SL+ LP  I  + +L+KL      +L  LP++   +  L  L++SG   
Sbjct: 705  NLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLVKLPSSFGNVTSLKELNLSGCSS 764

Query: 533  FREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
              E P  + ++ +L +++ +G +++  LP SI   + L  L+L NC SL   P ++ NL 
Sbjct: 765  LLEIPSSIGNIVNLKKVYADGCSSLVQLPSSIGNNTNLKELHLLNCSSLMECPSSMLNLT 824

Query: 592  CLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKN 650
             L  L LSGC  L K P I  ++ +L  L+L D +S+ E+P +IE  T L+ L L  C N
Sbjct: 825  RLEDLNLSGCLSLVKLPSI-GNVINLQSLYLSDCSSLMELPFTIENATNLDTLYLDGCSN 883

Query: 651  LVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPI 710
            L+ LPSSI  + +L++L L+GC  L+ +P  +    +L+ L                   
Sbjct: 884  LLELPSSIWNITNLQSLYLNGCSSLKELPSLVENAINLQSL------------------- 924

Query: 711  NLMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLP 769
            +LM+ S  ++LP S+  + +L  L++++C+              SL EL L         
Sbjct: 925  SLMKCSSLVELPSSIWRISNLSYLDVSNCS--------------SLLELNL--------- 961

Query: 770  TSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIAC 829
              ++H                  P +P ++  +    C SLV  LD              
Sbjct: 962  --VSH------------------PVVPDSL-ILDAGDCESLVQRLDCF------------ 988

Query: 830  LDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
              + K++ N +  F + +E  + +  T    + ++PG ++P +F Y+  G S+TV
Sbjct: 989  FQNPKIVLNFANCFKLNQEARDLIIQTSACRNAILPGEKVPAYFTYRATGDSLTV 1043


>gi|357513231|ref|XP_003626904.1| TMV resistance protein N [Medicago truncatula]
 gi|355520926|gb|AET01380.1| TMV resistance protein N [Medicago truncatula]
          Length = 1179

 Score =  388 bits (996), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 226/567 (39%), Positives = 344/567 (60%), Gaps = 25/567 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++SR +++   + + SS V + GI GMGG GKTT A+ +++ I+ +F  + F++N+RE+ 
Sbjct: 218 LESRVQQVIQFIQNQSSKVCLTGIWGMGGSGKTTTAKAIFNQINLKFMHASFIENIREVC 277

Query: 61  SKG--GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            K   G++ LQ+QLLS ++K  +  ++N+ +G  M+  R + K V +V+DDV   +QL++
Sbjct: 278 IKNDRGIIHLQQQLLSDVMK-TNEKVYNIAEGQMMINERFRGKNVFVVLDDVTTFEQLKA 336

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L  N E+FG GS +IIT+RD HLL    VD V K   ++ +E+L+LF+   F+   P ++
Sbjct: 337 LCANPEFFGPGSVLIITTRDVHLLDLFKVDYVCKMKEMDENESLELFSWHVFRQPNPRED 396

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             + S R++ Y GGLPLALEV+GS+ +  + ++W S     +  P  +I + L+IS+DGL
Sbjct: 397 FSEFSKRVVSYCGGLPLALEVIGSYSNQMTDEDWISVFSNPKTIPNHQIQEKLRISYDGL 456

Query: 239 -QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHD 296
            Q++EK IFLDI CFF G DR YVT  L GCG     GI VL+E+ L+ V N N L MHD
Sbjct: 457 NQDMEKDIFLDICCFFIGKDRTYVTEILNGCGLDADTGITVLVERSLLKVDNYNKLEMHD 516

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           L++++G++IV+  S +E GKRSRLW  E+V  +LT ++GTE VEG+VL +   +    +C
Sbjct: 517 LIRDMGREIVRESSAKEPGKRSRLWFHEDVHDILTTNSGTETVEGLVLKS---QRTGRVC 573

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            S  +F KM  LRLL++  + L      LS  LR + W+G+    +P +      +   +
Sbjct: 574 FSTNSFKKMNQLRLLQLDCVDLTGDYGNLSKELRWVHWQGFTFNCIPDDFHQGNLVVFEL 633

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
            +S I ++W   K L  LK++ LSHS  L   PDF+  PNLEKLI++ C  L E+HPS+ 
Sbjct: 634 KHSNIKQVWNKTKLLVNLKILNLSHSRYLTSSPDFSKLPNLEKLIMKDCPSLSEVHPSIG 693

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
             NKL++LN+KDC                 + L +LP +I  LK L+TL +SG  K  + 
Sbjct: 694 DLNKLLMLNLKDC-----------------IGLSNLPKSIYQLKSLNTLILSGCSKIDKL 736

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSI 563
            E +  ME L+ L    TA++ +P SI
Sbjct: 737 EEDIVQMESLTTLIANNTAVKEVPFSI 763



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 93/184 (50%), Gaps = 12/184 (6%)

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           + L  +H +G     +P        LV+  LK+    ++   T   L  L+ L LS    
Sbjct: 604 KELRWVHWQGFTFNCIPDDFHQ-GNLVVFELKHSNIKQVWNKT-KLLVNLKILNLSHSRY 661

Query: 604 LKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
           L   P+  + + +L +L + D  S+ EV  SI  L KL +LNL DC  L  LP SI  LK
Sbjct: 662 LTSSPDFSK-LPNLEKLIMKDCPSLSEVHPSIGDLNKLLMLNLKDCIGLSNLPKSIYQLK 720

Query: 663 SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
           SL TL LSGC K++ + E + Q+ESL  L  + TAV         +P +++R S +++  
Sbjct: 721 SLNTLILSGCSKIDKLEEDIVQMESLTTLIANNTAVKE-------VPFSIVR-SKSIRYI 772

Query: 723 SLSG 726
           SL G
Sbjct: 773 SLCG 776


>gi|227438165|gb|ACP30572.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1184

 Score =  388 bits (996), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 304/917 (33%), Positives = 472/917 (51%), Gaps = 105/917 (11%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M +  E L+ ++  GS +VRMIGI G  G+GKTTIARV ++ +S+ F+ S F+D+++  S
Sbjct: 237  MGAHWENLKSILCLGSDEVRMIGIWGPPGIGKTTIARVAFNQLSNSFQLSVFMDDLKANS 296

Query: 61   SK------GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
            S+         + LQ+Q +SQ+    D     V     ++ +RL+ KKVL+V+D V    
Sbjct: 297  SRLCSDDYSVKLQLQQQFMSQITDHKDM----VVSHFGVVSNRLRDKKVLVVLDGVNRSV 352

Query: 115  QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
            QL ++A    WFG GSRIIIT++D+ L + HG++ +Y+ +    DEALQ+F    F    
Sbjct: 353  QLDAMAKETWWFGPGSRIIITTQDQKLFRAHGINHIYEVNLPTNDEALQIFCTYCFGQNF 412

Query: 175  PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
            P     +L+  +   +G LPL L V+GS+L G S ++W ++L RL     ++I  IL+ S
Sbjct: 413  PKYGFEELAREVTSLSGELPLGLRVMGSYLRGMSKEDWTNSLPRLRDSLDTDIQSILKFS 472

Query: 235  FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
            +D L + +K +FL IACFF       +   L     +    ++VL EK LI++ +  + M
Sbjct: 473  YDALDDEDKDLFLHIACFFSSEQIHKMEEHLAKRFLYVRQRLKVLAEKSLISIDSGRIRM 532

Query: 295  HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLT-ESTGTELVEGIVLDNYHHENEV 353
            H LL++LG++IV +QS  E G+R  L+ + ++C VLT  +TG++ V GI  + Y    E+
Sbjct: 533  HSLLEKLGREIVCKQSIHEPGQRQFLYDKRDICEVLTGGATGSKSVIGIKFEYYRIREEI 592

Query: 354  YLCASAKAFSKMTNLRLLKICN----LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMD 409
             +  S KAF  M+NL+ LK+C     LQ+  GL YLS++LRLL WR +P+  LP  + ++
Sbjct: 593  DI--SEKAFEGMSNLQFLKVCGFTDALQITGGLNYLSHKLRLLEWRHFPMTCLPCTVNLE 650

Query: 410  KTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLY 469
              +E+ M YS++ +LW+G K L  LK M L +S NL  +PD + A NLEKL L  C+ L 
Sbjct: 651  FLVELVMPYSKLEKLWEGCKPLRCLKWMDLGYSVNLKELPDLSTATNLEKLYLYDCSSLV 710

Query: 470  EIHPSLLLHNKLIILNMKDCTSLITLPGKILMK-SLEKLNLKSLPTTISGLKCLSTLDVS 528
            ++ PS +  N L  LN+  C+SL+  P  I    +L++L+L S P  +            
Sbjct: 711  KL-PS-MSGNSLEKLNIGGCSSLVEFPSFIGNAVNLQELDLSSFPNLL------------ 756

Query: 529  GDLKFREFPEIVEHMEHLSELHLEGT-AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
                  E P  V +  +L  L L     +  LPLS+  L  L  L LK C  LE+LP  +
Sbjct: 757  ------ELPSYVGNATNLEYLDLRNCLNMVELPLSLRNLKKLKRLRLKGCSKLEVLPTNI 810

Query: 588  SNLKCLRSLKLSGCSKLK--KFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLN 644
             NL+ L  L ++GCS L    F  I  ++ +L EL +     + EVPS I   T LE L 
Sbjct: 811  -NLEYLNELDIAGCSSLDLGDFSTIGNAV-NLRELNISSLPQLLEVPSFIGNATNLENLV 868

Query: 645  LSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVP-------------------ETLGQI 685
            LS C  LV LP  I  L+ L+ L L GC +LE +P                   ++  QI
Sbjct: 869  LSSCSKLVELPLFIGNLQKLRWLRLEGCIRLEVLPTNINLESLLELNLSDCSMLKSFPQI 928

Query: 686  ES-LEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDC-NLMEG 743
             + LE+L++ GTA+         +P            PS+     L++L+++   NL E 
Sbjct: 929  STNLEKLNLRGTAIEQ-------VP------------PSIRSWPHLKELHMSYFENLKE- 968

Query: 744  ALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR 803
              P  +  + SL    L+      +P  +  +S+L    L  C++L  LP +  +   + 
Sbjct: 969  -FPHALERITSLS---LTDTEIQEVPPLVKQISRLNRFFLSGCRKLVRLPPISESTHSIY 1024

Query: 804  VNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLE-AVSNTRQHLSV 862
             N C SL  L  +        T   C             F + +E  +  +  + +H   
Sbjct: 1025 ANDCDSLEILECSFSDQIRRLTFANC-------------FKLNQEARDLIIQASSEH--A 1069

Query: 863  VVPGSEIPEWFMYQNEG 879
            V+PG ++P +F ++  G
Sbjct: 1070 VLPGGQVPPYFTHRATG 1086


>gi|357516579|ref|XP_003628578.1| Leucine-rich repeat-containing protein [Medicago truncatula]
 gi|355522600|gb|AET03054.1| Leucine-rich repeat-containing protein [Medicago truncatula]
          Length = 1210

 Score =  388 bits (996), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 355/1136 (31%), Positives = 532/1136 (46%), Gaps = 198/1136 (17%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            ++ R EK+  L+   S++V+++G+ GMGG+GKTT+A+ +++ +   F+   F+ NVR+ +
Sbjct: 44   INERVEKVMDLLQLQSNNVKVLGLYGMGGVGKTTLAKALFNSLVGRFKRRCFISNVRQFA 103

Query: 61   SKG-GLVSLQRQLLSQLLKLADNS--IWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
            SK  GLVS+Q  ++  L         I +V  GI  +   ++  +VLLV+DDV  V QL 
Sbjct: 104  SKDDGLVSIQNNIIKDLSSQEGTRSFISDVKAGISTIKRIVRENRVLLVLDDVDHVNQLD 163

Query: 118  SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
            +L G REWF  GS IIIT+RD  +L    V+E+Y        E  +L+  +A+K      
Sbjct: 164  ALIGKREWFHEGSCIIITTRDTTVLPEKHVNELY--------EVTELYPEEAWKN----- 210

Query: 178  ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
                                           ++EW   LE+L    P  + D+L+IS+DG
Sbjct: 211  ------------------------------ELEEWEDVLEKLRTIRPGNLHDVLKISYDG 240

Query: 238  LQELEKKIFLDIACFF--KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWM 294
            L+E EK IFLDIACFF   G  RD V + L GCGF   I   VL+EKCLI V  +NTLWM
Sbjct: 241  LEEQEKCIFLDIACFFVQMGMKRDDVIDVLRGCGFRGEIATTVLVEKCLIKVREDNTLWM 300

Query: 295  HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVL----------TESTGTELVEGIVL 344
            HD ++++G+QIV  ++  + G RSRLW   E+  VL          ++  GT  ++GIVL
Sbjct: 301  HDQIRDMGRQIVLDENHVDPGMRSRLWDRAEIMSVLKSKKVKIQKHSKMHGTRCIQGIVL 360

Query: 345  D-----NYHHENEVY--LCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGY 397
            D         + E Y  +    K+F  M NLRLL+I NL L    ++L + L+ L WRG 
Sbjct: 361  DFKERSTAQPQAEKYDQVTLDTKSFEPMVNLRLLQIDNLSLEG--KFLPDELKWLQWRGC 418

Query: 398  PLKFLPSN-LQMDKTIEIYMCYSRIGELW--KGIKHLDKLKVMILSHSENLIRMPDFTGA 454
            PL+ +  N L  +  +       +I  LW  K  K  + L VM LS    L  +PD +  
Sbjct: 419  PLECIHLNTLPRELAVLDLSNGEKIKSLWGLKSHKVPETLMVMNLSDCYQLAAIPDLSWC 478

Query: 455  PNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKIL-MKSLEKL------ 507
              LEK+ L  C  L  IH S+     L+ LN+  C +LI LP  +  +K LE L      
Sbjct: 479  LGLEKINLVNCINLTRIHESIGSLTTLLNLNLTRCENLIELPSDVSGLKHLESLILSECS 538

Query: 508  NLKSLPTTISGLKCLSTLDVSGD-----------------------LKFREFPEIVEHME 544
             LK+LP  I  LK L TL                            L  R  P  +  + 
Sbjct: 539  KLKALPENIGMLKSLKTLAADKTAIVKLPESIFRLTKLERLVLDSCLYLRRLPNCIGKLC 598

Query: 545  HLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCL----------- 593
             L EL L  + ++ L  ++  L  L  L+L  C+SL ++P ++ NL+ L           
Sbjct: 599  SLLELSLNHSGLQELHNTVGFLKSLEKLSLIGCKSLTLMPDSIGNLESLTELLASNSGIK 658

Query: 594  ------------RSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLE 641
                        R L +  C  L K P+  +++  + EL LDGTSI+ +P  I  L +L 
Sbjct: 659  ELPSTIGSLSYLRILSVGDCKLLNKLPDSFKNLASIIELKLDGTSIRYLPDQIGELKQLR 718

Query: 642  LLNLSDCKNLVRLPSSIIALKSLKTLN-----------------------LSGCFKLENV 678
             L + +C NL  LP SI  L SL TLN                       L+ C  L+ +
Sbjct: 719  KLEIGNCCNLESLPESIGQLASLTTLNIVNGNIRELPASIGLLENLVTLTLNQCKMLKQL 778

Query: 679  PETLGQIESLEELDISGTAV---PHSTSWYSYIPINLMRKSVALK-----------LPSL 724
            P ++G ++SL  L + GTA+   P S    S +    M K+  L            +PS 
Sbjct: 779  PASVGNLKSLCHLMMMGTAMSDLPESFGMLSRLRTLRMAKNPDLVSKYAENTDSFVIPS- 837

Query: 725  SGLCSLRKLNLTDCNL--MEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIE 782
               C+L  L+  D     + G +P +   L  LK L L +N+F SLP+S+  LS L  + 
Sbjct: 838  -SFCNLTLLSELDACAWRLSGKIPDEFEKLSLLKTLNLGQNNFHSLPSSLKGLSILKELS 896

Query: 783  LEDCKRLQSLPQLPPNIRQVRVNGCASLVTL--------LDALKL--CKS--DSTMIACL 830
            L +C  L SLP LP ++  +  + C +L T+        L+ LKL  CK   D   + CL
Sbjct: 897  LPNCTELISLPSLPSSLIMLNADNCYALETIHDMSNLESLEELKLTNCKKLIDIPGLECL 956

Query: 831  DSLKLL---GNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRP 887
             SL+ L   G  + +  + +   + V    Q+LS+  PG+++PEW   +    +++ ++ 
Sbjct: 957  KSLRRLYLSGCNACSSKVCKRLSKVVLRNFQNLSM--PGTKLPEWLSRE----TVSFSKR 1010

Query: 888  SNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGS 947
             NL    +L    I  +F + +N+  N   G          +G  I+        G    
Sbjct: 1011 KNL----ELTSVVIGVIFSIKQNNMKNQMSGVVDVQAKVLKLGEEIFSTSLY--IGGVPR 1064

Query: 948  DHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVS-FEPWLGQGLEVKMCGLHPVY 1002
                 +YL R   Y    PL S L+  +S+ V V+   P   + LE+K CG+H ++
Sbjct: 1065 TDDQHIYLRRCNNYH---PLVSALK--DSDTVCVAKRNPPFDERLELKKCGVHLIF 1115


>gi|317415950|emb|CAR94516.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 807

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 254/630 (40%), Positives = 362/630 (57%), Gaps = 71/630 (11%)

Query: 15  GSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLS 74
           G+ +VR+IGICGM G+GK+TIA+ +   I ++F+A  F+  V EIS K  L  ++ QL  
Sbjct: 218 GTEEVRVIGICGMPGIGKSTIAKALSQRIRNQFDAFSFISKVGEISRKKSLFHIKEQLCD 277

Query: 75  QLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGN------REWFGS 128
            LL +   +  NV    D++  RL  K+VL+V+D+V +++Q+ ++AGN         FG 
Sbjct: 278 HLLNMQ-VTTKNV---DDVIRKRLCNKRVLIVLDNVEELEQIDAVAGNDGADELSSRFGK 333

Query: 129 GSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIR 188
           GS+IIIT+  E LL  +   ++Y    L  DE+L LF  KAFK   P+    +L    + 
Sbjct: 334 GSKIIITTACERLLINYN-PKIYTIEKLTQDESLLLFCRKAFKKDHPMDGYEKLCYEFLD 392

Query: 189 YAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPS---EILDILQISFDGLQELEKK- 244
           Y  GLPLALEV G+ L  RSV++W S L  L+ +  S   +I++ L+ SFDGL+  E++ 
Sbjct: 393 YVDGLPLALEVFGNSLLDRSVEDWSSRLASLKDDNYSGKNKIVNYLKESFDGLENQEQRE 452

Query: 245 IFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQ 304
           IFLDIACFFKG D   V N  E CG++P I + +L EK L+++    LWMH+LLQ++G++
Sbjct: 453 IFLDIACFFKGEDACRVENIFESCGYYPGINLNILCEKYLVSIVGGKLWMHNLLQQMGRE 512

Query: 305 IVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSK 364
           +V+ +S +E G RSRLW   E  HVL  + GT+ V+GI L   H E +V+L      FS 
Sbjct: 513 VVRGESKKE-GARSRLWLHTEAIHVLKGNKGTDAVQGIFLSLPHPE-KVHL--KKDPFSN 568

Query: 365 MTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGEL 424
           M NLRLLKI N++    LEYLS+ L  L W  YPLK LPS+ + DK +E+ +  S I +L
Sbjct: 569 MDNLRLLKIYNVEFSGCLEYLSDELSFLEWHKYPLKSLPSSFEPDKLVELNLSESEIEQL 628

Query: 425 WKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIIL 484
           W+ I+                                     R  E         KL+IL
Sbjct: 629 WEEIE-------------------------------------RPLE---------KLLIL 642

Query: 485 NMKDCTSLITLPGKILMKSLEKLNLKSLPT-----TISGLKCLSTLDVSGDLKFREFPEI 539
           N+ DC  LI +P    + +LE+L LK   +      I  L+ L+  ++SG  K  + PEI
Sbjct: 643 NLSDCQKLIKIPDFDKVPNLEQLILKGCTSLSEVPDIINLRSLTNFNLSGCSKLEKIPEI 702

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP-VTVSNLKCLRSLKL 598
            E M+ L +LHL+GTAI  LP SIE LSGL LL+L++C++L  LP V   +L  L+ L L
Sbjct: 703 GEDMKQLRKLHLDGTAIEELPTSIEHLSGLTLLDLRDCKNLLSLPDVFCDSLTSLQILNL 762

Query: 599 SGCSKLKKFPEIVRSMKDLSELFLDGTSIK 628
           SGCS L K P+ + S++ L EL   GT+I+
Sbjct: 763 SGCSNLDKLPDNLGSLECLQELDASGTAIR 792



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/195 (44%), Positives = 121/195 (62%), Gaps = 5/195 (2%)

Query: 506 KLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHL-EGTAIRGLPLSIE 564
           K  LKSLP++    K L  L++S     + + EI   +E L  L+L +   +  +P   +
Sbjct: 600 KYPLKSLPSSFEPDK-LVELNLSESEIEQLWEEIERPLEKLLILNLSDCQKLIKIP-DFD 657

Query: 565 LLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG 624
            +  L  L LK C SL  +P  + NL+ L +  LSGCSKL+K PEI   MK L +L LDG
Sbjct: 658 KVPNLEQLILKGCTSLSEVP-DIINLRSLTNFNLSGCSKLEKIPEIGEDMKQLRKLHLDG 716

Query: 625 TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSII-ALKSLKTLNLSGCFKLENVPETLG 683
           T+I+E+P+SIE L+ L LL+L DCKNL+ LP     +L SL+ LNLSGC  L+ +P+ LG
Sbjct: 717 TAIEELPTSIEHLSGLTLLDLRDCKNLLSLPDVFCDSLTSLQILNLSGCSNLDKLPDNLG 776

Query: 684 QIESLEELDISGTAV 698
            +E L+ELD SGTA+
Sbjct: 777 SLECLQELDASGTAI 791



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 114/256 (44%), Gaps = 59/256 (23%)

Query: 573 NLKNCRSLEILPVTVSNLKCLRSL--KLSGCS----KLKKFPEIVRSMKDLSELFLDGTS 626
           N+ N R L+I  V  S   CL  L  +LS        LK  P      K L EL L  + 
Sbjct: 568 NMDNLRLLKIYNVEFSG--CLEYLSDELSFLEWHKYPLKSLPSSFEPDK-LVELNLSESE 624

Query: 627 IKEVPSSIEL-LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI 685
           I+++   IE  L KL +LNLSDC+ L+++P     + +L+ L L GC  L  VP+ +   
Sbjct: 625 IEQLWEEIERPLEKLLILNLSDCQKLIKIPD-FDKVPNLEQLILKGCTSLSEVPDIIN-- 681

Query: 686 ESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGAL 745
                                                    L SL   NL+ C+ +E  +
Sbjct: 682 -----------------------------------------LRSLTNFNLSGCSKLE-KI 699

Query: 746 PSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQL----PPNIRQ 801
           P    ++  L++L+L   +   LPTSI HLS L  ++L DCK L SLP +      +++ 
Sbjct: 700 PEIGEDMKQLRKLHLDGTAIEELPTSIEHLSGLTLLDLRDCKNLLSLPDVFCDSLTSLQI 759

Query: 802 VRVNGCASLVTLLDAL 817
           + ++GC++L  L D L
Sbjct: 760 LNLSGCSNLDKLPDNL 775


>gi|444739192|dbj|BAM77406.1| clubroot disease resistance protein [Brassica rapa]
          Length = 1224

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 304/909 (33%), Positives = 472/909 (51%), Gaps = 67/909 (7%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-- 58
            M +  + +  L+   S +VRMIGI G  G+GK+TIAR ++   S +F+ S F++N++   
Sbjct: 247  MRAHMKSMELLLRLDSDEVRMIGIWGPSGIGKSTIARSLFSQHSPDFQLSVFMENIKREY 306

Query: 59   ----ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
                       V LQ + LS +L   D +I ++    D    RL+ KKVL+V+DDV    
Sbjct: 307  PRPCFDRYSAQVQLQNKFLSLILNQNDVAIHHLGVAQD----RLKNKKVLVVLDDVDHSA 362

Query: 115  QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
            QL +LA    WFGSGSRII+T++D+ +L  H ++ +Y+    + DEAL++F + AF    
Sbjct: 363  QLDALAKETCWFGSGSRIIVTTQDKKILNAHRINHIYEVGFPHDDEALEIFCINAFGQKS 422

Query: 175  PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
            P      L+  + R  G LPL L V+GS+  G S + W   L RL      E   IL+ S
Sbjct: 423  PYDGFGDLAREVTRLVGNLPLGLSVMGSYFKGLSKEVWERELPRLRTRLDGETESILKFS 482

Query: 235  FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIG-IRVLIEKCLITV-HNNTL 292
            +D L + ++ +FL IACFF G   D V  FL    F  V G +RVL EK LI+V     +
Sbjct: 483  YDALCDEDQALFLHIACFFNGERTDKVEEFL-AEKFVAVEGRLRVLAEKSLISVGSEGYI 541

Query: 293  WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTEST-GTELVEGIVLDNYHHEN 351
             MHDLL  LG++IV++QSP E G+R  L  + ++  VL + T G+  V GI   N+  + 
Sbjct: 542  RMHDLLARLGREIVRKQSPNEPGQRQFLVDDGDIRQVLRDDTLGSRSVIGI---NFLLKK 598

Query: 352  EVYLCASAKAFSKMTNLRLLKICNLQLPNGL------EY-------LSNRLRLLGWRGYP 398
            ++ +  S +AF +M+NL+ L++ +      L      +Y       L   +RLL WR +P
Sbjct: 599  KLKI--SDQAFERMSNLQFLRLDSQYFAQILFEGKSSQYILESVNCLPREVRLLDWRTFP 656

Query: 399  LKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLE 458
            +  LPS+   +  +EI M  S + +LW+G K +  LK M LSHS+NL  +P+ + A NL 
Sbjct: 657  MTCLPSDFNPELLMEIKMICSNLEKLWEGNKTIRNLKWMDLSHSKNLKELPNLSTATNLR 716

Query: 459  KLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISG 518
            +L L GC+ L E+  S+     L  LN+K C+SL+                  LP++I  
Sbjct: 717  ELNLFGCSSLMELPSSIGNLTNLKKLNLKLCSSLM-----------------ELPSSIGN 759

Query: 519  LKCLSTLDVSGDLKFREFPEIVEHMEHLSELHL-EGTAIRGLPLSIELLSGLVLLNLKNC 577
            +  L  L++SG     E P  + +M +L   +L + +++  L  SI  ++ L  L L  C
Sbjct: 760  MTNLENLNLSGCSSLVELPSSISNMTNLENFNLSQCSSVVRLSFSIGNMTNLKELELNEC 819

Query: 578  RSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIEL 636
             SL  + +T  N+  L++L  + CS L +    + +M +L  L L G +S+ E+P SI  
Sbjct: 820  SSL--VELTFGNMTNLKNLDPNRCSSLVEISSSIGNMTNLVRLDLTGCSSLVELPYSIGN 877

Query: 637  LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
            +T LE L LS C +LV LPSSI  L +LK LNL  C  L  +P  +  ++SL+ LD+S  
Sbjct: 878  MTNLETLELSGCSSLVELPSSIGNLHNLKRLNLRNCSTLMALPVNIN-MKSLDFLDLSYC 936

Query: 697  AVPHSTSWYSYIPINLMRKSVAL-KLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSL 755
            +V  S    S   I L  K  A+ ++P  + + S  +L+  D +  E    S       +
Sbjct: 937  SVLKSFPEISTNIIFLGIKGTAIEEIP--TSIRSWSRLDTLDMSYSENLRKSHHA-FDLI 993

Query: 756  KELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLD 815
              L+LS      +   +  +S+L  + +  C +L SLPQLP ++  + V  C SL   LD
Sbjct: 994  TNLHLSDTGIQEISPWVKEMSRLRELVINGCTKLVSLPQLPDSLEFMHVENCESL-ERLD 1052

Query: 816  ALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMY 875
            +L  C    T +  L  +  L        + RE ++ +  T   +  + PG  +P +F Y
Sbjct: 1053 SLD-CSFYRTKLTDLRFVNCL-------KLNREAVDLILKTSTKIWAIFPGESVPAYFSY 1104

Query: 876  QNEGSSITV 884
            +  GSS+++
Sbjct: 1105 RATGSSVSM 1113


>gi|15241520|ref|NP_199264.1| target of AVRB operation1 protein [Arabidopsis thaliana]
 gi|9758704|dbj|BAB09158.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007735|gb|AED95118.1| target of AVRB operation1 protein [Arabidopsis thaliana]
          Length = 1187

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 293/895 (32%), Positives = 463/895 (51%), Gaps = 112/895 (12%)

Query: 18   DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVR---------EISSKGGLVSL 68
            +VRMIGI G  G+GKTTI+RV+Y+ + H+F+    +DN++         E S+K   + L
Sbjct: 233  EVRMIGIWGPAGIGKTTISRVLYNKLFHQFQLGAIIDNIKVRYPRPCHDEYSAK---LQL 289

Query: 69   QRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGS 128
            Q++LLSQ++   D     V   + +   RL+ KKVLLV+DDV  + QL ++A + +WFG 
Sbjct: 290  QKELLSQMINQKDM----VVPHLGVAQERLKDKKVLLVLDDVDGLVQLDAMAKDVQWFGL 345

Query: 129  GSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIR 188
            GSRII+ ++D  LLK HG+  +YK      DEAL++F M AF    P     Q++  +  
Sbjct: 346  GSRIIVVTQDLKLLKAHGIKYIYKVDFPTSDEALEIFCMYAFGEKSPKVGFEQIARTVTT 405

Query: 189  YAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLD 248
             AG LPL L V+GS+L   S  EW  ++ RL      +I  +L+ S++ L E EK +FL 
Sbjct: 406  LAGKLPLGLRVMGSYLRRMSKQEWAKSIPRLRTSLDDDIESVLKFSYNSLAEQEKDLFLH 465

Query: 249  IACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQR 308
            I CFF+    + +  FL         G+++L +K L++++   + MH+LL +LG  IV++
Sbjct: 466  ITCFFRRERIETLEVFLAKKSVDMRQGLQILADKSLLSLNLGNIEMHNLLVQLGLDIVRK 525

Query: 309  QSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNL 368
            QS  + GKR  L   E++C VLT+ TGT  + GI L+      E  +  S +AF +M NL
Sbjct: 526  QSIHKPGKRQFLVDTEDICEVLTDDTGTRTLIGIDLE-LSGVIEGVINISERAFERMCNL 584

Query: 369  RLLKI-------CN--LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
            + L+        C+  L LP GL ++S +LRLL W  YPL  LP     +  ++I M  S
Sbjct: 585  QFLRFHHPYGDRCHDILYLPQGLSHISRKLRLLHWERYPLTCLPPKFNPEFLVKINMRDS 644

Query: 420  RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
             + +LW G + +  LK M LS   NL  +PDF+ A NL++L L  C  L E+  S+    
Sbjct: 645  MLEKLWDGNEPIRNLKWMDLSFCVNLKELPDFSTATNLQELRLINCLSLVELPSSIGNAT 704

Query: 480  KLIILNMKDCTSLITLPGKI-LMKSLEKL------NLKSLPTTISGLKCLSTLDVSGDLK 532
             L+ L++ DC+SL+ LP  I  + +L+KL      +L  LP++   +  L  L++SG   
Sbjct: 705  NLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLVKLPSSFGNVTSLKELNLSGCSS 764

Query: 533  FREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
              E P  + ++ +L +++ +G +++  LP SI   + L  L+L NC SL   P ++ NL 
Sbjct: 765  LLEIPSSIGNIVNLKKVYADGCSSLVQLPSSIGNNTNLKELHLLNCSSLMECPSSMLNLT 824

Query: 592  CLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKN 650
             L  L LSGC  L K P I  ++ +L  L+L D +S+ E+P +IE  T L+ L L  C N
Sbjct: 825  RLEDLNLSGCLSLVKLPSI-GNVINLQSLYLSDCSSLMELPFTIENATNLDTLYLDGCSN 883

Query: 651  LVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPI 710
            L+ LPSSI  + +L++L L+GC  L+ +P  +    +L+ L                   
Sbjct: 884  LLELPSSIWNITNLQSLYLNGCSSLKELPSLVENAINLQSL------------------- 924

Query: 711  NLMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLP 769
            +LM+ S  ++LP S+  + +L  L++++C+              SL EL L  +  V   
Sbjct: 925  SLMKCSSLVELPSSIWRISNLSYLDVSNCS--------------SLLELNLVSHPVV--- 967

Query: 770  TSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIAC 829
                                       P+   +    C SLV  LD              
Sbjct: 968  ---------------------------PDSLILDAGDCESLVQRLDCF------------ 988

Query: 830  LDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
              + K++ N +  F + +E  + +  T    + ++PG ++P +F Y+  G S+TV
Sbjct: 989  FQNPKIVLNFANCFKLNQEARDLIIQTSACRNAILPGEKVPAYFTYRATGDSLTV 1043


>gi|356561376|ref|XP_003548958.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1049

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 261/729 (35%), Positives = 409/729 (56%), Gaps = 34/729 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++ R +++  L++  S  V M+GI G+GG+GKTT+AR +Y+LI+ +FE   FLDNVRE S
Sbjct: 194 LEFRMKEVNSLLNFKSGGVHMVGIHGVGGVGKTTLARAIYNLIADQFEVLCFLDNVRENS 253

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            K GLV LQ  LLS+ +      + ++ + I ++  RL RKKVLLV+DDV    QL ++A
Sbjct: 254 IKNGLVHLQETLLSKTIGEKGIKLGSINEAIPIIKHRLHRKKVLLVLDDVDKPDQLHAIA 313

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G  +WFGSGSR+IIT+R+ HLL  HGV+ +Y+ HGLN+ EAL+L +  AFKT +     V
Sbjct: 314 GGMDWFGSGSRVIITTRNRHLLTCHGVESIYEVHGLNHKEALELLSWSAFKTGKVDPCYV 373

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            +  R + YA GLPLAL+V+GS L G+ ++EW S L++ +  P  +I DIL++SFD L+E
Sbjct: 374 NILNRAVTYASGLPLALKVIGSNLIGKRIEEWESALDQYQRIPNKDIQDILKVSFDSLEE 433

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFL-EGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLL 298
            E+ IFLDIAC FKG     V   L    GF P  GI VLI+K LI +     + +HDL+
Sbjct: 434 YEQNIFLDIACCFKGYRLSEVKEILFSHHGFCPQYGIGVLIDKSLIKIDCFGNVTLHDLI 493

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           +++G++IV+R+SPEE   RSRLW  E++  VL E+ GT  ++ I LD  ++E   +    
Sbjct: 494 EDMGKEIVRRESPEEPENRSRLWCPEDIVQVLEENKGTSRIQMIALDYLNYEEVEW---D 550

Query: 359 AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM-- 416
             AF +M NL+ L I       G ++L N LR+L WR YP   LP +    K + + +  
Sbjct: 551 GMAFKEMNNLKTLIIRGGCFTTGPKHLPNSLRVLEWRRYPSPSLPFDFNPKKLVSLQLPD 610

Query: 417 -CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
            C + +  L    + L+ ++V+  +    +  +PD  GAPNL++L  E C  L +IH S+
Sbjct: 611 SCLTSLNWLNSKNRFLN-MRVLNFNQCHYITEIPDVCGAPNLQELSFEYCENLIKIHVSV 669

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLPTTISGLKCLSTLDVSG 529
              +KL IL+   C+ L + P  + + SLE+L      NL+  P  +  ++ +++LD+  
Sbjct: 670 GFLDKLKILDADGCSKLTSFP-PMKLTSLEELKLSFCANLECFPEILGKMENVTSLDIK- 727

Query: 530 DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSN 589
           D   +E P  ++H+  L  + L+   +  LP +   +  L  L +  C  L +LPV    
Sbjct: 728 DTPIKELPSSIQHLSRLQRIKLKNGGVIQLPSTFFAMKELRYLLVNQCEGL-LLPVENEG 786

Query: 590 LKCLRS---------LKLSGCSKLKKFPEI-VRSMKDLSELFLDGTSIKEVPSSIELLTK 639
            + + S         L LS C    KF +  +    ++ EL+L+G     +P+ I+    
Sbjct: 787 KEQMSSMVVENTIGYLDLSHCHISDKFLQSGLPLFSNVKELYLNGNDFTILPACIQEFQF 846

Query: 640 LELLNLSDCKNLVR---LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
           L  L L  C+NL     +P ++    + +  +L+   +   + E L + +  +E  + GT
Sbjct: 847 LTELYLEACENLHEIGWIPPNLEVFSARECSSLTSECRSMLLNEELHEADGFKEFILPGT 906

Query: 697 AVPHSTSWY 705
            +P    W+
Sbjct: 907 RIP---EWF 912



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 144/349 (41%), Gaps = 77/349 (22%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
           +R L  + C  + + P++     +L EL F    ++ ++  S+  L KL++L+   C  L
Sbjct: 628 MRVLNFNQCHYITEIPDVC-GAPNLQELSFEYCENLIKIHVSVGFLDKLKILDADGCSKL 686

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYI 708
              P   + L SL+ L LS C  LE  PE LG++E++  LDI  T +   P S    S +
Sbjct: 687 TSFPP--MKLTSLEELKLSFCANLECFPEILGKMENVTSLDIKDTPIKELPSSIQHLSRL 744

Query: 709 PINLMRKSVALKLPS-----------LSGLC----------------------SLRKLNL 735
               ++    ++LPS           L   C                      ++  L+L
Sbjct: 745 QRIKLKNGGVIQLPSTFFAMKELRYLLVNQCEGLLLPVENEGKEQMSSMVVENTIGYLDL 804

Query: 736 TDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQL 795
           + C++ +  L S +    ++KELYL+ N F  LP  I     L  + LE C+ L  +  +
Sbjct: 805 SHCHISDKFLQSGLPLFSNVKELYLNGNDFTILPACIQEFQFLTELYLEACENLHEIGWI 864

Query: 796 PPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSN 855
           PPN+       C+SL +       C+S                      +L E L     
Sbjct: 865 PPNLEVFSARECSSLTS------ECRS---------------------MLLNEELHEADG 897

Query: 856 TRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCV 904
            ++    ++PG+ IPEWF   NE SSI        + + K    ++C V
Sbjct: 898 FKE---FILPGTRIPEWFECTNE-SSIC------FWFRDKFPAISVCVV 936


>gi|147858652|emb|CAN82538.1| hypothetical protein VITISV_004290 [Vitis vinifera]
          Length = 1241

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 246/628 (39%), Positives = 356/628 (56%), Gaps = 55/628 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DS   +L  L+   S DVRM+GI GMGG+GKTT+AR +Y+ IS +FE   FL NV  ++
Sbjct: 258 VDSCIRELESLLCLPSMDVRMVGIWGMGGIGKTTLARAIYEQISGQFEGCCFLPNVEHLA 317

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           SKG    L+++LLS++L+       N+   I  + +R   KKVL+VID+V     L++L 
Sbjct: 318 SKGDDY-LRKELLSKVLRDK-----NIDVTITSVKARFHSKKVLIVIDNVNHRSILKTLV 371

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G  +WFG  SRIIIT+RD+H+L  HGVD +Y+   L  D+A++LFN  AF  + P ++ +
Sbjct: 372 GELDWFGPQSRIIITTRDKHVLTMHGVDVIYEVQKLQDDKAIELFNHHAFINHPPTEDVM 431

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS R+I YA GLPLALEVLGS L  +S DEW   L +LE  P  EI  +LQ SFD L +
Sbjct: 432 ELSQRVIAYAQGLPLALEVLGSSLCKKSKDEWECALNKLEKIPDMEIRKVLQTSFDELDD 491

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            +K IFLDIA FF   + D+ T  L   GF  + GIR LI+K LI   ++ L MHDLL E
Sbjct: 492 DQKNIFLDIAIFFNEVEEDFTTEMLNSFGFSAISGIRTLIDKSLIXNLDDELHMHDLLIE 551

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G++IV+R SP+E GKR+RLW+++++CH      GT+ VE I   +++      +C + +
Sbjct: 552 MGKEIVRRTSPKEPGKRTRLWEQQDICH------GTDEVEVI---DFNLSGLKEICFTTE 602

Query: 361 AFSKMTNLRLLKI-----------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLP 403
           AF  M+ LRLL I                 C + + +  ++  + LR L W  YPLK LP
Sbjct: 603 AFGNMSKLRLLAIHESSXSDDSECSSRLMQCQVHISDDFKFHYDELRXLXWEEYPLKSLP 662

Query: 404 SNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
           S+ +    + + M  S +  LW+G +    LK + LS S+ L   PDF+   NL+ L  E
Sbjct: 663 SDFKSQNLVFLSMTKSHLTRLWEGNRVFKNLKYIDLSDSKYLAETPDFSRVXNLKXLXFE 722

Query: 464 GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKIL-MKSLEKLNLKSLPTTISGLKCL 522
                 E+  S+    KL++L++++C  L++LP  I  +  LE L+L       SG   L
Sbjct: 723 ------ELPSSIAYATKLVVLDLQNCEKLLSLPSSICKLAHLETLSL-------SGCSRL 769

Query: 523 STLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLK-NCRSL 580
               V+ D      P I++ + HL EL L+   ++R LP    L S + L+N   NC SL
Sbjct: 770 GKPQVNSD-NLDALPRILDRLSHLRELQLQDCRSLRALP---PLPSSMELINASDNCTSL 825

Query: 581 E-ILPVTVSNLKCLRSLKLSGCSKLKKF 607
           E I P +V    C        C +L K+
Sbjct: 826 EYISPQSV--FLCFGGSIFGNCFQLTKY 851



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 169/445 (37%), Gaps = 102/445 (22%)

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVT 586
           +S D KF        H + L  L  E   ++ LP   +    LV L++     L  L   
Sbjct: 637 ISDDFKF--------HYDELRXLXWEEYPLKSLPSDFKS-QNLVFLSMTKSH-LTRLWEG 686

Query: 587 VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLS 646
               K L+ + LS    L + P+  R         L     +E+PSSI   TKL +L+L 
Sbjct: 687 NRVFKNLKYIDLSDSKYLAETPDFSRVXN------LKXLXFEELPSSIAYATKLVVLDLQ 740

Query: 647 DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYS 706
           +C+ L+ LPSSI  L  L+TL+LSGC +L         +++L  +               
Sbjct: 741 NCEKLLSLPSSICKLAHLETLSLSGCSRLGKPQVNSDNLDALPRI--------------- 785

Query: 707 YIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFV 766
                            L  L  LR+L L DC  +  ALP                    
Sbjct: 786 -----------------LDRLSHLRELQLQDCRSLR-ALP-------------------- 807

Query: 767 SLPTSITHLSKLLNIELEDCKRLQSL-PQLPPNIRQVRVNGCASLVTLLDALKLCKSDST 825
            LP+S+    +L+N   ++C  L+ + PQ         V  C       +  +L K  S 
Sbjct: 808 PLPSSM----ELINAS-DNCTSLEYISPQ--------SVFLCFGGSIFGNCFQLTKYQSK 854

Query: 826 MIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVT 885
           M   L  +    ++    S    Y +   N +   S V PGS IP+WFM+ ++G  + + 
Sbjct: 855 MGPHLXRMATHFDQDRWKSA---YDQQYPNVQVPFSTVFPGSTIPDWFMHYSKGHEVDID 911

Query: 886 RPSNLYNKKKLVGYAICCVFHVLKNS--RGNNCFGSYPTHQLN-------CHIGHGIYGI 936
              + Y+    +G+A+  V      S  RG + + +   H LN              +  
Sbjct: 912 VDPDWYD-SSFLGFALSAVIAPKDGSITRGWSTYCNLDLHDLNSESESESESESESSWVC 970

Query: 937 GFRD------KFGQAGSDHLWLLYL 955
            F D      +     SDHLWL Y+
Sbjct: 971 SFTDARTCQLEDTTINSDHLWLAYV 995


>gi|147812101|emb|CAN61526.1| hypothetical protein VITISV_036339 [Vitis vinifera]
          Length = 2047

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 262/699 (37%), Positives = 387/699 (55%), Gaps = 80/699 (11%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M    EKL+ LM+  S++V ++GI G+GG+GKTTIA+ +Y+ IS+EF  S FL NVRE  
Sbjct: 186 MSFHLEKLKSLMNIESNEVCVVGISGIGGIGKTTIAKAIYNDISYEFHGSCFLKNVRE-R 244

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           SK   + LQ++LL  +L+     + N+ +G+ M+ + L  KKVL+V+DDV  +KQL+ LA
Sbjct: 245 SKDNTLQLQQELLHGILRGKCLKVSNIEEGLKMIKNCLNSKKVLVVLDDVDALKQLEYLA 304

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
              EWF + S +IIT+RD+  L  +G    Y+   LN +E+++LF+  AFK   P +   
Sbjct: 305 EEPEWFSTKSIVIITTRDKRFLTQYGKHVSYEVEKLNEEESIELFSRWAFKQNLPQEAYR 364

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            LS  II YA GLPLAL+VLGSF  G++  +W+  L +LE  P  EI ++L+IS+DGL +
Sbjct: 365 NLSYHIIEYAKGLPLALKVLGSFFLGKTRSQWKEALHKLEKIPHIEIQNVLKISYDGLND 424

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
           +EK IFLDIACFF+G D++ V+  L         GI +L +K LIT+  N L MH+L+Q+
Sbjct: 425 IEKGIFLDIACFFEGEDKEVVSRILHNVSIE--CGISILHDKGLITILENKLEMHNLIQQ 482

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G +IV+++ P+E GK SRLW  E+V  VLT++TGTE +EGI+LD    E   +   + +
Sbjct: 483 MGHEIVRQECPKEPGKWSRLWDPEDVYRVLTKNTGTEAIEGIILDISASEQIQF---TTE 539

Query: 361 AFSKMTNLRLL---------------------KICNLQLPNGLEYLSNRLRLLGWRGYPL 399
           AF  M  LRLL                     ++  + LP   +  S  L  L W GY L
Sbjct: 540 AFKMMNRLRLLIVHQDAKYDSMVEHHVVGDQVQLSKMHLPANFQIPSFELTFLHWDGYSL 599

Query: 400 KFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEK 459
           + LPSN Q D  +E+++  S I +L +G    + LKV+ LS S +LI++PD T  PNLE 
Sbjct: 600 ESLPSNFQADNLVELHLRCSNIKQLCEGNMIFNILKVINLSFSVHLIKIPDITSVPNLEI 659

Query: 460 LILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGL 519
           LILEGCT L  +   +     L  L  ++C                 L L+S P     +
Sbjct: 660 LILEGCTNLMSLPSDIYKLKGLRTLCCREC-----------------LKLRSFPEIKERM 702

Query: 520 KCLSTLDVSGDLKFREFP-EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCR 578
           K L  L +S +   +E P    +H++ L++L L G                       CR
Sbjct: 703 KNLRELYLS-ETDLKELPSSSTKHLKGLTDLDLTG-----------------------CR 738

Query: 579 SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLD-----------GTSI 627
           +L  +P ++  ++ L++L  S C KL K PE + S+  L  L L+           G   
Sbjct: 739 NLIHVPKSICAMRSLKALSFSYCPKLDKLPEDLESLPCLESLSLNFLRCELPCXVRGNHF 798

Query: 628 KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKT 666
             +P+ I  L +L  LNLS CK L+++P    +L++L T
Sbjct: 799 STIPAGISKLPRLRSLNLSHCKKLLQIPELPSSLRALDT 837



 Score =  199 bits (507), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 147/404 (36%), Positives = 208/404 (51%), Gaps = 57/404 (14%)

Query: 548  ELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKF 607
            +L L G     LP +IE    L  L L+NC  LE LP  +  LK L+SL  SGCS+LK F
Sbjct: 1079 KLCLAGNEFYELP-TIECPLALDSLCLRNCEKLESLPSDICKLKSLKSLFCSGCSELKSF 1137

Query: 608  PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL 667
            PEIV +M++L +L+L+ T+I+E+PSSI+ L  L+ L++  C NLV LP SI  L SLK L
Sbjct: 1138 PEIVENMENLRKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNLVSLPESICNLTSLKVL 1197

Query: 668  NLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGL 727
             +  C KL  +PE LG + SLEEL        ++T  Y          S+  +LPSLSGL
Sbjct: 1198 VVDCCPKLYKLPENLGSLRSLEEL--------YATHSY----------SIGCQLPSLSGL 1239

Query: 728  CSLRK-------------------------LNLTDCNLMEGALPSDIGNLCSLKELYLSK 762
            CSLR                          LNL++ NL+EG +P +I NL SL+ L L  
Sbjct: 1240 CSLRILDIQNSNLSQRAIPNDICCLYSLKLLNLSNFNLIEGGIPREIYNLSSLQALLLGG 1299

Query: 763  NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKS 822
            N F S+P  I+ L+ L  ++L  C+ L  +P+   +++ + V+ C SL TL     L + 
Sbjct: 1300 NHFSSIPDGISRLTALRVLDLSHCQNLLRIPEFSSSLQVLDVHSCTSLETLSSPSNLLQ- 1358

Query: 823  DSTMIACLDSLKL---LGNKSLAFSMLREYLEAVSNTRQHLSVVVP-GSEIPEWFMYQNE 878
             S ++ C  SL     L N       +  YL         +S+ +P  S IPEW  YQ E
Sbjct: 1359 -SCLLKCFKSLIQDLELENDIPIEPHVAPYLNG------GISIAIPRSSGIPEWIRYQKE 1411

Query: 879  GSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPT 922
            GS +    P N Y     +G+A+  + HV  +   ++ F +  T
Sbjct: 1412 GSKVAKKLPRNWYKNDDFLGFALFSI-HVPLDYESDDLFDNQDT 1454



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 203/490 (41%), Gaps = 143/490 (29%)

Query: 563  IELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL 622
            I  +  L +L L+ C +L  LP  +  LK LR+L    C KL+ FPEI   MK+L EL+L
Sbjct: 651  ITSVPNLEILILEGCTNLMSLPSDIYKLKGLRTLCCRECLKLRSFPEIKERMKNLRELYL 710

Query: 623  DGTSIKEVP-SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPET 681
              T +KE+P SS + L  L  L+L+ C+NL+ +P SI A++SLK L+ S C KL+ +PE 
Sbjct: 711  SETDLKELPSSSTKHLKGLTDLDLTGCRNLIHVPKSICAMRSLKALSFSYCPKLDKLPED 770

Query: 682  LGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLM 741
            L  +  LE L                  +N +R     +LP     C +R  + +     
Sbjct: 771  LESLPCLESLS-----------------LNFLR----CELP-----CXVRGNHFS----- 799

Query: 742  EGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQ 801
               +P+ I  L  L+ L LS                        CK+L  +P+LP ++R 
Sbjct: 800  --TIPAGISKLPRLRSLNLSH-----------------------CKKLLQIPELPSSLRA 834

Query: 802  VRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLS 861
            +  +G  S VTL                          S  +S+L+ +  A+  T  + +
Sbjct: 835  LDTHG--SPVTL-------------------------SSGPWSLLKCFKSAIQETDCNFT 867

Query: 862  --VVVPG-SEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKN-------- 910
              V +PG S IP+W     +GS      P N Y     +G++I C + +L N        
Sbjct: 868  KVVFIPGDSGIPKWINGFQKGSYAERMLPQNWYQDNMFLGFSIGCAYVLLDNESDREFDY 927

Query: 911  -------------------SRGNNCFGSYPTHQLNCHIGHGIYGIGFRD----------- 940
                               +  +    ++ +H L CH+     G   RD           
Sbjct: 928  SSENESEHTSSDESDYSSENEESQKKSAHTSHNLECHLIMEGEGDDLRDLEHFPFPFDCE 987

Query: 941  --KFGQAG-SDHLWLLYLSRQTCYDIRLPLESNLEPFESNH---VNVSFEPW--LGQGLE 992
              +  + G SD +W++Y  +     + +P     E F SN    +  S E +   G+ L+
Sbjct: 988  CYEDDEDGVSDQMWVMYYPK-----VAIP-----ENFHSNQWTALQASIEGYNRYGKPLK 1037

Query: 993  VKMCGLHPVY 1002
            VK C +  +Y
Sbjct: 1038 VKYCVIDLIY 1047



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 143/256 (55%), Gaps = 10/256 (3%)

Query: 509  LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSG 568
            L+SLP+ I  LK L +L  SG  + + FPEIVE+ME+L +L+L  TAI  LP SI+ L G
Sbjct: 1110 LESLPSDICKLKSLKSLFCSGCSELKSFPEIVENMENLRKLYLNQTAIEELPSSIDHLQG 1169

Query: 569  LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT-SI 627
            L  L++++C +L  LP ++ NL  L+ L +  C KL K PE + S++ L EL+   + SI
Sbjct: 1170 LQCLSVESCDNLVSLPESICNLTSLKVLVVDCCPKLYKLPENLGSLRSLEELYATHSYSI 1229

Query: 628  KEVPSSIELLTKLELLNLSDCKNLVR-LPSSIIALKSLKTLNLSGCFKLE-NVPETLGQI 685
                 S+  L  L +L++ +     R +P+ I  L SLK LNLS    +E  +P  +  +
Sbjct: 1230 GCQLPSLSGLCSLRILDIQNSNLSQRAIPNDICCLYSLKLLNLSNFNLIEGGIPREIYNL 1289

Query: 686  ESLEELDISG---TAVPHSTSWYSYIPI-NLMRKSVALKLPSLSGLCSLRKLNLTDCNLM 741
             SL+ L + G   +++P   S  + + + +L      L++P  S   SL+ L++  C  +
Sbjct: 1290 SSLQALLLGGNHFSSIPDGISRLTALRVLDLSHCQNLLRIPEFSS--SLQVLDVHSCTSL 1347

Query: 742  EG-ALPSDIGNLCSLK 756
            E  + PS++   C LK
Sbjct: 1348 ETLSSPSNLLQSCLLK 1363



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 100/208 (48%), Gaps = 15/208 (7%)

Query: 399  LKFLPSNLQ-MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPN 456
            LK  P  ++ M+   ++Y+  + I EL   I HL  L+ + +   +NL+ +P+      +
Sbjct: 1134 LKSFPEIVENMENLRKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNLVSLPESICNLTS 1193

Query: 457  LEKLILEGCTRLYEIHPSL----------LLHNKLIILNMKDCTSLITLPGKILMKSLEK 506
            L+ L+++ C +LY++  +L            H+  I   +   + L +L  +IL      
Sbjct: 1194 LKVLVVDCCPKLYKLPENLGSLRSLEELYATHSYSIGCQLPSLSGLCSL--RILDIQNSN 1251

Query: 507  LNLKSLPTTISGLKCLSTLDVSG-DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIEL 565
            L+ +++P  I  L  L  L++S  +L     P  + ++  L  L L G     +P  I  
Sbjct: 1252 LSQRAIPNDICCLYSLKLLNLSNFNLIEGGIPREIYNLSSLQALLLGGNHFSSIPDGISR 1311

Query: 566  LSGLVLLNLKNCRSLEILPVTVSNLKCL 593
            L+ L +L+L +C++L  +P   S+L+ L
Sbjct: 1312 LTALRVLDLSHCQNLLRIPEFSSSLQVL 1339


>gi|16944811|emb|CAC82811.1| resistance gene-like [Solanum tuberosum subsp. andigenum]
          Length = 1126

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 256/714 (35%), Positives = 399/714 (55%), Gaps = 44/714 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D+  +K+  L++    DVR++ I GMGG+GKTTIAR ++D++S +F+ + FL + +E  
Sbjct: 204 IDAHLKKVNSLLEMKIDDVRIVWIWGMGGVGKTTIARAIFDILSSKFDGACFLPDNKE-- 261

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +K  + SLQ  LLS+L+   +N + +  DG  ++  RL+ KKVL+V+D++    QL+ LA
Sbjct: 262 NKYEIHSLQSILLSKLVGEKENCVHDKEDGRHLMARRLRLKKVLVVLDNIDHEDQLKYLA 321

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G+  WFG+G+RII T+RD+H ++ +  D VY    L   +A+QLFN  AFK   P +   
Sbjct: 322 GDLGWFGNGTRIIATTRDKHFIRKN--DAVYPVTTLLEHDAVQLFNQYAFKNEVPDKCFE 379

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +++  ++ +A GLPLAL+V GS L  + +  WRS ++R++  P S++++ L++S+DGL+ 
Sbjct: 380 EITLEVVSHAEGLPLALKVWGSSLHKKDIHVWRSAVDRIKRNPSSKVVENLKVSYDGLER 439

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQ 299
            +++IFLDIACF +G  +  +   LE C F    G+RVLI+K L+ +   +T+ MHDL+Q
Sbjct: 440 EDQEIFLDIACFLRGRKQTEIKQILESCDFGADDGLRVLIDKSLVFISEYDTIQMHDLIQ 499

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTES-TGTELVEGIVLDNYHHENEVYLCAS 358
           E+G+ IV  Q  ++ G+ +RLW  ++          GT+ +E I +          L   
Sbjct: 500 EMGKYIVTMQ--KDRGEVTRLWLTQDFEKFSNAKIQGTKAIEAIWIPEIQD-----LSFR 552

Query: 359 AKAFSKMTNLRLLKICNLQLPNGL--EYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            KA   +  LR+L I     P+G   +YL + LR      YP + LP+    D  + + +
Sbjct: 553 KKAMKDVEKLRILYINGFHTPDGSNDQYLPSNLRWFDCCKYPWESLPAKFDPDMLVHLDL 612

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             S +  LW G K    L+ + LS   NL+R PDFT  PNLE L LE C+ L E+H SL 
Sbjct: 613 QQSSLFHLWTGTKKFPFLRRLDLSSCANLMRTPDFTDMPNLEYLGLEECSNLKEVHHSLR 672

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
              KLI LN++DC +L +    +  +SLE L+L+                  G     +F
Sbjct: 673 CSKKLIKLNLRDCKNLESF-SYVCWESLECLHLQ------------------GCSNLEKF 713

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLS-IELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
           P I   ++   E+ ++ + IR LP + I+  S L  L+L   ++L  L  ++  LK L  
Sbjct: 714 PRIRGKLKPEIEIQVQRSGIRKLPSAIIQHQSSLTELDLSGMKNLATLSCSIGELKSLVM 773

Query: 596 LKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRL- 654
           LK+S CSKLK  PE +  +++L  L    T I + PSSI  L +L+ L  +  K+ V L 
Sbjct: 774 LKVSYCSKLKSLPEEIGDLENLEILKAGYTLISQPPSSIVRLNRLKFLTFAKQKSEVGLE 833

Query: 655 -------PSSIIALKSLKTLNLSGC-FKLENVPETLGQIESLEELDISGTAVPH 700
                  P     L SLKTLNLS C  K E +P+ +G + SLE L++ G    H
Sbjct: 834 DEVHFVFPPVNQGLCSLKTLNLSYCNLKDEGLPQDIGSLSSLEVLNLRGNNFEH 887



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 135/432 (31%), Positives = 210/432 (48%), Gaps = 63/432 (14%)

Query: 496 PGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTA 555
           P  ++   L++ +L  L T       L  LD+S        P+  + M +L  L LE  +
Sbjct: 604 PDMLVHLDLQQSSLFHLWTGTKKFPFLRRLDLSSCANLMRTPDFTD-MPNLEYLGLEECS 662

Query: 556 -IRGLPLSIELLSGLVLLNLKNCRSLEILP-VTVSNLKCLRSLKLSGCSKLKKFPEIVRS 613
            ++ +  S+     L+ LNL++C++LE    V   +L+CL    L GCS L+KFP I   
Sbjct: 663 NLKEVHHSLRCSKKLIKLNLRDCKNLESFSYVCWESLECLH---LQGCSNLEKFPRIRGK 719

Query: 614 MKDLSELFLDGTSIKEVPSSI-ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC 672
           +K   E+ +  + I+++PS+I +  + L  L+LS  KNL  L  SI  LKSL  L +S C
Sbjct: 720 LKPEIEIQVQRSGIRKLPSAIIQHQSSLTELDLSGMKNLATLSCSIGELKSLVMLKVSYC 779

Query: 673 FKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMR--------------KSVA 718
            KL+++PE +G +E+LE L    T +    S  S + +N ++                V 
Sbjct: 780 SKLKSLPEEIGDLENLEILKAGYTLISQPPS--SIVRLNRLKFLTFAKQKSEVGLEDEVH 837

Query: 719 LKLPSLS-GLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSK 777
              P ++ GLCSL+ LNL+ CNL +  LP DIG+L SL+ L L  N+F  LP S+T LS 
Sbjct: 838 FVFPPVNQGLCSLKTLNLSYCNLKDEGLPQDIGSLSSLEVLNLRGNNFEHLPQSLTRLSS 897

Query: 778 LLNIELEDCKRLQSLPQLPPNIRQVRVNG-----CASLVTLLDALK--LCKSDSTMIACL 830
           L +++L DCK L  LP+ P  +  +  +      C SL   + + +  +C SDS      
Sbjct: 898 LQSLDLLDCKSLTQLPEFPRQLDTIYADWNNDSICNSLFQNISSFQHDICASDSL----- 952

Query: 831 DSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNL 890
            SL++  N+                             IP WF +Q +  S++V  P N 
Sbjct: 953 -SLRVFTNE--------------------------WKNIPRWFHHQGKDKSVSVKLPENW 985

Query: 891 YNKKKLVGYAIC 902
           Y     +G+A+C
Sbjct: 986 YVCDNFLGFAVC 997


>gi|16944812|emb|CAC82812.1| resistance gene-like [Solanum tuberosum subsp. andigenum]
          Length = 1101

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 256/714 (35%), Positives = 399/714 (55%), Gaps = 44/714 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D+  +K+  L++    DVR++ I GMGG+GKTTIAR ++D++S +F+ + FL + +E  
Sbjct: 179 IDAHLKKVNSLLEMKIDDVRIVWIWGMGGVGKTTIARAIFDILSSKFDGACFLPDNKE-- 236

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +K  + SLQ  LLS+L+   +N + +  DG  ++  RL+ KKVL+V+D++    QL+ LA
Sbjct: 237 NKYEIHSLQSILLSKLVGEKENCVHDKEDGRHLMARRLRLKKVLVVLDNIDHEDQLKYLA 296

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G+  WFG+G+RII T+RD+H ++ +  D VY    L   +A+QLFN  AFK   P +   
Sbjct: 297 GDLGWFGNGTRIIATTRDKHFIRKN--DAVYPVTTLLEHDAVQLFNQYAFKNEVPDKCFE 354

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +++  ++ +A GLPLAL+V GS L  + +  WRS ++R++  P S++++ L++S+DGL+ 
Sbjct: 355 EITLEVVSHAEGLPLALKVWGSSLHKKDIHVWRSAVDRIKRNPSSKVVENLKVSYDGLER 414

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQ 299
            +++IFLDIACF +G  +  +   LE C F    G+RVLI+K L+ +   +T+ MHDL+Q
Sbjct: 415 EDQEIFLDIACFLRGRKQTEIKQILESCDFGADDGLRVLIDKSLVFISEYDTIQMHDLIQ 474

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTES-TGTELVEGIVLDNYHHENEVYLCAS 358
           E+G+ IV  Q  ++ G+ +RLW  ++          GT+ +E I +          L   
Sbjct: 475 EMGKYIVTMQ--KDRGEVTRLWLTQDFEKFSNAKIQGTKAIEAIWIPEIQD-----LSFR 527

Query: 359 AKAFSKMTNLRLLKICNLQLPNGL--EYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            KA   +  LR+L I     P+G   +YL + LR      YP + LP+    D  + + +
Sbjct: 528 KKAMKDVEKLRILYINGFHTPDGSNDQYLPSNLRWFDCCKYPWESLPAKFDPDMLVHLDL 587

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             S +  LW G K    L+ + LS   NL+R PDFT  PNLE L LE C+ L E+H SL 
Sbjct: 588 QQSSLFHLWTGTKKFPFLRRLDLSSCANLMRTPDFTDMPNLEYLGLEECSNLKEVHHSLR 647

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
              KLI LN++DC +L +    +  +SLE L+L+                  G     +F
Sbjct: 648 CSKKLIKLNLRDCKNLESF-SYVCWESLECLHLQ------------------GCSNLEKF 688

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLS-IELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
           P I   ++   E+ ++ + IR LP + I+  S L  L+L   ++L  L  ++  LK L  
Sbjct: 689 PRIRGKLKPEIEIQVQRSGIRKLPSAIIQHQSSLTELDLSGMKNLATLSCSIGELKSLVM 748

Query: 596 LKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRL- 654
           LK+S CSKLK  PE +  +++L  L    T I + PSSI  L +L+ L  +  K+ V L 
Sbjct: 749 LKVSYCSKLKSLPEEIGDLENLEILKAGYTLISQPPSSIVRLNRLKFLTFAKQKSEVGLE 808

Query: 655 -------PSSIIALKSLKTLNLSGC-FKLENVPETLGQIESLEELDISGTAVPH 700
                  P     L SLKTLNLS C  K E +P+ +G + SLE L++ G    H
Sbjct: 809 DEVHFVFPPVNQGLCSLKTLNLSYCNLKDEGLPQDIGSLSSLEVLNLRGNNFEH 862



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 135/432 (31%), Positives = 210/432 (48%), Gaps = 63/432 (14%)

Query: 496 PGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTA 555
           P  ++   L++ +L  L T       L  LD+S        P+  + M +L  L LE  +
Sbjct: 579 PDMLVHLDLQQSSLFHLWTGTKKFPFLRRLDLSSCANLMRTPDFTD-MPNLEYLGLEECS 637

Query: 556 -IRGLPLSIELLSGLVLLNLKNCRSLEILP-VTVSNLKCLRSLKLSGCSKLKKFPEIVRS 613
            ++ +  S+     L+ LNL++C++LE    V   +L+CL    L GCS L+KFP I   
Sbjct: 638 NLKEVHHSLRCSKKLIKLNLRDCKNLESFSYVCWESLECLH---LQGCSNLEKFPRIRGK 694

Query: 614 MKDLSELFLDGTSIKEVPSSI-ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC 672
           +K   E+ +  + I+++PS+I +  + L  L+LS  KNL  L  SI  LKSL  L +S C
Sbjct: 695 LKPEIEIQVQRSGIRKLPSAIIQHQSSLTELDLSGMKNLATLSCSIGELKSLVMLKVSYC 754

Query: 673 FKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMR--------------KSVA 718
            KL+++PE +G +E+LE L    T +    S  S + +N ++                V 
Sbjct: 755 SKLKSLPEEIGDLENLEILKAGYTLISQPPS--SIVRLNRLKFLTFAKQKSEVGLEDEVH 812

Query: 719 LKLPSLS-GLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSK 777
              P ++ GLCSL+ LNL+ CNL +  LP DIG+L SL+ L L  N+F  LP S+T LS 
Sbjct: 813 FVFPPVNQGLCSLKTLNLSYCNLKDEGLPQDIGSLSSLEVLNLRGNNFEHLPQSLTRLSS 872

Query: 778 LLNIELEDCKRLQSLPQLPPNIRQVRVNG-----CASLVTLLDALK--LCKSDSTMIACL 830
           L +++L DCK L  LP+ P  +  +  +      C SL   + + +  +C SDS      
Sbjct: 873 LQSLDLLDCKSLTQLPEFPRQLDTIYADWNNDSICNSLFQNISSFQHDICASDSL----- 927

Query: 831 DSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNL 890
            SL++  N+                             IP WF +Q +  S++V  P N 
Sbjct: 928 -SLRVFTNE--------------------------WKNIPRWFHHQGKDKSVSVKLPENW 960

Query: 891 YNKKKLVGYAIC 902
           Y     +G+A+C
Sbjct: 961 YVCDNFLGFAVC 972


>gi|359493412|ref|XP_002280045.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1077

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 271/698 (38%), Positives = 395/698 (56%), Gaps = 72/698 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D+R ++++  +   S DV MIGI GMGG+GKTT+AR +Y+ IS +FEA  FL++V ++ 
Sbjct: 194 IDARIQEIKMRLRLESDDVGMIGIWGMGGIGKTTLARALYNEISRQFEAHSFLEDVGKVL 253

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +  GL+ LQ+  LS LL+  D ++     G+  + +RL  KKVL+V+D+V D    + L 
Sbjct: 254 ANEGLIKLQQIFLSSLLEEKDLNM----KGLTSIKARLHSKKVLVVLDNVNDPTIFECLI 309

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           GN++WFG GSRIIIT+RD+ L+ +HGVD  Y+    N DEA +     + K      + +
Sbjct: 310 GNQDWFGRGSRIIITARDKCLI-SHGVD-YYEVPKFNSDEAYEFIKCHSLKHELLRGDFM 367

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS  +I YA GLPLAL+VL   L   S +E R+ L++L+     +I ++L+IS+DGL +
Sbjct: 368 ELSTSMIGYAQGLPLALKVLRPILFSMSKEESRNQLDKLKSTLNKKIEEVLRISYDGLDD 427

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            EK IFLDIACFFKG D+DYV   L+GCGF P+ GIR LI+K LI+++ N   MHDL+QE
Sbjct: 428 KEKNIFLDIACFFKGEDKDYVIEILDGCGFFPLCGIRSLIDKSLISIYGNKFQMHDLIQE 487

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G +IV++QS +ELGKRSRL   E++  VL ++TG+E +EGI L+ +H +  +    + +
Sbjct: 488 MGLEIVRQQSLQELGKRSRLLFHEDIYDVLKKNTGSEKIEGIFLNLFHLQETIDF--TTQ 545

Query: 361 AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
           AF+ M         NL                   GY LK LP++      + + M  SR
Sbjct: 546 AFAGM---------NLY------------------GYSLKSLPNDFNAKNLVHLSMPCSR 578

Query: 421 IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
           I +LWKGIK L+KLK M LSHS+ LI  P+ +   NLE+L+LE C  L ++HPSL     
Sbjct: 579 IEQLWKGIKVLEKLKRMDLSHSKYLIETPNLSRVTNLERLVLEDCVSLCKVHPSLRDLKN 638

Query: 481 LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
           L  L++K+C                   LKSLP+    LK L  L +SG  KF +F E  
Sbjct: 639 LKFLSLKNCKM-----------------LKSLPSGPYDLKSLEILILSGCSKFEQFLENF 681

Query: 541 EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCR----SLEILPVTVSNLKCLRSL 596
            ++E L EL+ +GTA+R LP S+ L   LV+L+L+ C+    +    P   SN    R  
Sbjct: 682 GNLEMLKELYADGTALRELPSSLSLSRNLVILSLEGCKGPPSASWWFPRRSSNSTGFRLH 741

Query: 597 KLSGCSKLKKFPEIVRSMKDLSE------------LFLDGTSIKEVPSSIELLTKLELLN 644
            LSG   L        ++ D +             L L G +   +P ++  L++LE + 
Sbjct: 742 NLSGLCSLSTLNLSYCNLSDETNLSSLVLLSSLEYLHLCGNNFVTLP-NLSRLSRLEDVQ 800

Query: 645 LSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
           L +C  L  LP       S+  L+   C  L+NV   L
Sbjct: 801 LENCTRLQELPD---LPSSIGLLDARNCTSLKNVQSHL 835



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 179/385 (46%), Gaps = 61/385 (15%)

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           +  + ++L G +++ LP        LV L++  C  +E L   +  L+ L+ + LS    
Sbjct: 545 QAFAGMNLYGYSLKSLPNDFNA-KNLVHLSMP-CSRIEQLWKGIKVLEKLKRMDLSHSKY 602

Query: 604 LKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
           L + P + R + +L  L L D  S+ +V  S+  L  L+ L+L +CK L  LPS    LK
Sbjct: 603 LIETPNLSR-VTNLERLVLEDCVSLCKVHPSLRDLKNLKFLSLKNCKMLKSLPSGPYDLK 661

Query: 663 SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV-----------------------P 699
           SL+ L LSGC K E   E  G +E L+EL   GTA+                       P
Sbjct: 662 SLEILILSGCSKFEQFLENFGNLEMLKELYADGTALRELPSSLSLSRNLVILSLEGCKGP 721

Query: 700 HSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELY 759
            S SW  + P      S   +L +LSGLCSL  LNL+ CNL +    S +  L SL+ L+
Sbjct: 722 PSASW--WFP-RRSSNSTGFRLHNLSGLCSLSTLNLSYCNLSDETNLSSLVLLSSLEYLH 778

Query: 760 LSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKL 819
           L  N+FV+LP +++ LS+L +++LE+C RLQ LP LP +I  +    C SL  +      
Sbjct: 779 LCGNNFVTLP-NLSRLSRLEDVQLENCTRLQELPDLPSSIGLLDARNCTSLKNVQ----- 832

Query: 820 CKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEG 879
                                   S L+  +  V N    L  + PGS +P+W  Y++ G
Sbjct: 833 ------------------------SHLKNRVIRVLNLVLGLYTLTPGSRLPDWIRYKSSG 868

Query: 880 SSITVTRPSNLYNKKKLVGYAICCV 904
             +    P N +N    +G+    V
Sbjct: 869 MEVIAELPPNWFN-SNFLGFWFAIV 892


>gi|359493410|ref|XP_002279970.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1212

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 267/697 (38%), Positives = 386/697 (55%), Gaps = 92/697 (13%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D+R ++++  +   S DV MIGI GMGG+GKTT+AR +Y+ IS +FEA  FL++V ++ 
Sbjct: 329 IDARIQEIKMRLRLESDDVGMIGIWGMGGIGKTTLARALYNEISRQFEAHSFLEDVGKVL 388

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
              GL+ LQ+  L  LL+  D +      G   + +RL  KK L+V+D+V D K L+ L 
Sbjct: 389 VNKGLIKLQQIFLYDLLEEKDLNT----KGFTFIKARLHSKKALVVLDNVNDPKILECLV 444

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           GN +WFG GSRIIIT+RD+HLL  HGV   Y+    NYDEA       + K    + + +
Sbjct: 445 GNWDWFGRGSRIIITARDKHLLIAHGV-LCYQVPTFNYDEAYGFIKRHSLKHELLIGDFL 503

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS  +I YA GLPLAL+VL S L G S  E R+ L++L+     +I ++L+IS+DGL +
Sbjct: 504 ELSKEMIDYAKGLPLALKVLCSSLFGMSKKERRNQLDKLKSTLHKKIEEVLRISYDGLDD 563

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            EK IFLDIACFFKG D+DYV   L+GCGF    GIR L+ K LI+++ N L MHDL+QE
Sbjct: 564 KEKNIFLDIACFFKGEDKDYVIEILDGCGFFSSCGIRTLVNKSLISIYGNKLEMHDLIQE 623

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G +IV++Q  +ELGKRSRLW  E++  VL ++TG+E +EG+ L +Y    ++Y      
Sbjct: 624 MGIEIVRQQFVQELGKRSRLWFHEDIIDVLKKNTGSEKIEGLFLSSYF---DLY------ 674

Query: 361 AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
                                              GY LK LP++      + + M  S 
Sbjct: 675 -----------------------------------GYSLKSLPNDFNAKNLVHLSMPCSH 699

Query: 421 IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
           I +LWKGIK L+KLK M LSHS+ LI  P+ +   NLE+L+LE C  L ++HPSL     
Sbjct: 700 IKQLWKGIKVLEKLKCMDLSHSKYLIETPNLSRVTNLERLVLEDCVSLCKVHPSLRDLKN 759

Query: 481 LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
           L  L+ K+C                   LKSLP+    LK L+TL +SG  KF +FPE  
Sbjct: 760 LNFLSFKNCKM-----------------LKSLPSGPYDLKSLATLILSGCSKFEQFPENF 802

Query: 541 EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCR---------------SLEILPV 585
            ++E L +L+ +GTA+R LP S+  L  L +L+   C+               S   +  
Sbjct: 803 GYLEMLKKLYADGTALRELPSSLSSLRNLEILSFVGCKGPPSASWLFPRRSSNSTGFILH 862

Query: 586 TVSNLKCLRSLKLSGCSKLKKFP-EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLN 644
            +S L  LR L LS C+   +     +  +  L +L+L   +   +P ++  L++LE   
Sbjct: 863 NLSGLCSLRKLDLSDCNLSDETNLSCLVYLSSLKDLYLCENNFVTLP-NLSRLSRLERFR 921

Query: 645 LSDC---KNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
           L++C   + L  LPSSI+ + +        C  L+NV
Sbjct: 922 LANCTRLQELPDLPSSIVQVDA------RNCTSLKNV 952



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 153/519 (29%), Positives = 226/519 (43%), Gaps = 64/519 (12%)

Query: 526  DVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPV 585
            D+   LK     E +E +   S   L G +++ LP        LV L++  C  ++ L  
Sbjct: 648  DIIDVLKKNTGSEKIEGLFLSSYFDLYGYSLKSLPNDFNA-KNLVHLSMP-CSHIKQLWK 705

Query: 586  TVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLN 644
             +  L+ L+ + LS    L + P + R + +L  L L D  S+ +V  S+  L  L  L+
Sbjct: 706  GIKVLEKLKCMDLSHSKYLIETPNLSR-VTNLERLVLEDCVSLCKVHPSLRDLKNLNFLS 764

Query: 645  LSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV------ 698
              +CK L  LPS    LKSL TL LSGC K E  PE  G +E L++L   GTA+      
Sbjct: 765  FKNCKMLKSLPSGPYDLKSLATLILSGCSKFEQFPENFGYLEMLKKLYADGTALRELPSS 824

Query: 699  -----------------PHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLM 741
                             P S SW    P      S    L +LSGLCSLRKL+L+DCNL 
Sbjct: 825  LSSLRNLEILSFVGCKGPPSASWL--FP-RRSSNSTGFILHNLSGLCSLRKLDLSDCNLS 881

Query: 742  EGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQ 801
            +    S +  L SLK+LYL +N+FV+LP +++ LS+L    L +C RLQ LP LP +I Q
Sbjct: 882  DETNLSCLVYLSSLKDLYLCENNFVTLP-NLSRLSRLERFRLANCTRLQELPDLPSSIVQ 940

Query: 802  VRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLS 861
            V    C SL                       K +  +++   +L+  +    N    L 
Sbjct: 941  VDARNCTSL-----------------------KNVSLRNVQSFLLKNRVIWDLNFVLALE 977

Query: 862  VVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYP 921
            ++ PGS +P+W  YQ+ G  +      N +N    +G+    V     N   +     Y 
Sbjct: 978  ILTPGSRLPDWIRYQSSGKEVIAELSPNWFN-SNFLGFGFANVVPKFSNLGLSRFVYCYL 1036

Query: 922  THQLNCHIGHGIYGIGFRDKF----GQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESN 977
            +   +    HG   + +             DH++LLY+   +  D   P    +   +  
Sbjct: 1037 SLSRSSDFTHGFRVVPYPHFLCLNRQMLTLDHVYLLYVPLSSFSDW-CPWGHIINWHQVT 1095

Query: 978  HVNVSFEPWLGQGLEVKMCGLHPVYMDEVEELDQTTNQP 1016
            H+  SF+P   Q  EVK  G+   Y +E    D   N P
Sbjct: 1096 HIKASFQPRSDQFGEVKRYGIGLAYSNE----DVNHNNP 1130


>gi|357449951|ref|XP_003595252.1| Heat shock protein [Medicago truncatula]
 gi|355484300|gb|AES65503.1| Heat shock protein [Medicago truncatula]
          Length = 1501

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 247/628 (39%), Positives = 366/628 (58%), Gaps = 37/628 (5%)

Query: 21  MIGICGMGGLGKTTIARVVYD-LISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKL 79
           M+GI G GG+GK+T+AR VY+  IS +F+   FLD++RE +   GLV LQ  LLS++L  
Sbjct: 282 MVGIYGTGGVGKSTLARAVYNNQISDQFDGVCFLDDIRENAINHGLVQLQETLLSEILCE 341

Query: 80  ADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDE 139
            D  + NV  GI ++  RLQRKKVLLV+DDV   KQ+Q LAG  +WFGSGS+IIIT+RD+
Sbjct: 342 KDIRVGNVNRGISIIKRRLQRKKVLLVLDDVDKAKQIQVLAGGHDWFGSGSKIIITTRDK 401

Query: 140 HLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV-QLSARIIRYAGGLPLALE 198
           HLL  H +  +Y+   LN++++L+LFN  AF+  + +  C   +S R + YA GLPLALE
Sbjct: 402 HLLAIHEILNIYEVKQLNHEKSLELFNWHAFRN-RKMDPCYSDISNRAVSYAHGLPLALE 460

Query: 199 VLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDR 258
           V+GS L G+ +D W+S L++ E     +I ++L+IS+D L E +K IFLDIACF+  ++ 
Sbjct: 461 VIGSHLFGKRLDVWKSALDKYERILHEDIHEVLKISYDDLDEDDKGIFLDIACFYNSDEM 520

Query: 259 DYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPEELGKR 317
            Y    L   GF    GI+VL +K LI +  N  + MHDL+Q++G++IV+++S  E GKR
Sbjct: 521 SYAKEMLYLHGFSAENGIQVLTDKSLIKIDGNGCVRMHDLVQDMGREIVRQESTLEPGKR 580

Query: 318 SRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQ 377
           SRLW ++++ HVL E+TGT+ VE I++D Y   N+  +  S +AF KM  L++L I + +
Sbjct: 581 SRLWSDDDIIHVLEENTGTDTVEVIIIDLY---NDKEVQWSGEAFKKMKKLKILIIRSAR 637

Query: 378 LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVM 437
              G + L N LR+L W GYP + LP +    K + I   +      +K IK  + L  +
Sbjct: 638 FFRGPQKLPNSLRVLDWSGYPSQSLPIDFN-PKKLNILSLHESYLISFKPIKVFESLSFL 696

Query: 438 ILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPG 497
                + L  +P  +G  NL  L L+ CT L  IH S+   NKL++L+ + C  L  L  
Sbjct: 697 DFEGCKLLTELPSLSGLLNLGALCLDDCTNLITIHKSVGFLNKLVLLSTQRCNELEVLVP 756

Query: 498 KILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIR 557
            I + SLE L+++       G  CL           + FPE++  ME++ +++L+ T+I 
Sbjct: 757 NINLPSLEILDMR-------GCSCL-----------KSFPEVLGVMENIRDVYLDQTSID 798

Query: 558 GLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK-----------K 606
            LP SI  L GL  L L+ C SL  L  ++  L  L  L   GC   +            
Sbjct: 799 KLPFSIRNLVGLRRLFLRECMSLTQLTDSIRILPKLEILTAYGCRGFQLFESKEKVGSEV 858

Query: 607 FPEIVRSMKDLSELFLDGTSIKEVPSSI 634
           FP+ +   K+ S   LD +S+   P ++
Sbjct: 859 FPKAMLVYKEGSAELLDMSSLNICPDNV 886



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/191 (35%), Positives = 100/191 (52%), Gaps = 6/191 (3%)

Query: 496 PGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-T 554
           P K+ + SL +  L S    I   + LS LD  G     E P +   + +L  L L+  T
Sbjct: 668 PKKLNILSLHESYLISF-KPIKVFESLSFLDFEGCKLLTELPSL-SGLLNLGALCLDDCT 725

Query: 555 AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
            +  +  S+  L+ LVLL+ + C  LE+L   + NL  L  L + GCS LK FPE++  M
Sbjct: 726 NLITIHKSVGFLNKLVLLSTQRCNELEVLVPNI-NLPSLEILDMRGCSCLKSFPEVLGVM 784

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC-- 672
           +++ +++LD TSI ++P SI  L  L  L L +C +L +L  SI  L  L+ L   GC  
Sbjct: 785 ENIRDVYLDQTSIDKLPFSIRNLVGLRRLFLRECMSLTQLTDSIRILPKLEILTAYGCRG 844

Query: 673 FKLENVPETLG 683
           F+L    E +G
Sbjct: 845 FQLFESKEKVG 855



 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 89/196 (45%), Gaps = 29/196 (14%)

Query: 546 LSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
           L  L   G   + LP+       L +L+L     +   P+ V   + L  L   GC  L 
Sbjct: 649 LRVLDWSGYPSQSLPIDFNP-KKLNILSLHESYLISFKPIKV--FESLSFLDFEGCKLLT 705

Query: 606 KFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL-VRLPSSIIALKS 663
           + P +   + +L  L LD  T++  +  S+  L KL LL+   C  L V +P+  I L S
Sbjct: 706 ELPSL-SGLLNLGALCLDDCTNLITIHKSVGFLNKLVLLSTQRCNELEVLVPN--INLPS 762

Query: 664 LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP- 722
           L+ L++ GC  L++ PE LG +E++ ++ +  T++                     KLP 
Sbjct: 763 LEILDMRGCSCLKSFPEVLGVMENIRDVYLDQTSID--------------------KLPF 802

Query: 723 SLSGLCSLRKLNLTDC 738
           S+  L  LR+L L +C
Sbjct: 803 SIRNLVGLRRLFLREC 818



 Score = 39.7 bits (91), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 26/168 (15%)

Query: 634 IELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDI 693
           I++   L  L+   CK L  LPS +  L +L  L L  C  L  + +++G +  L     
Sbjct: 687 IKVFESLSFLDFEGCKLLTELPS-LSGLLNLGALCLDDCTNLITIHKSVGFLNKL----- 740

Query: 694 SGTAVPHSTSWYSYIPINLMR-KSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNL 752
                         + ++  R   + + +P+++ L SL  L++  C+ ++ + P  +G +
Sbjct: 741 --------------VLLSTQRCNELEVLVPNIN-LPSLEILDMRGCSCLK-SFPEVLGVM 784

Query: 753 CSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIR 800
            +++++YL + S   LP SI +L  L  + L +C    SL QL  +IR
Sbjct: 785 ENIRDVYLDQTSIDKLPFSIRNLVGLRRLFLREC---MSLTQLTDSIR 829


>gi|280967726|gb|ACZ98532.1| TNL [Malus x domestica]
          Length = 990

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 247/623 (39%), Positives = 368/623 (59%), Gaps = 47/623 (7%)

Query: 11  LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQR 70
           L   GS+DV M+GI GMGGLGKTT A+ +Y+ I   F+   FL +  + +SK  LV LQ 
Sbjct: 222 LSSGGSNDVLMVGIWGMGGLGKTTAAKAIYNQIHPMFQFKSFLADNSDSTSKDRLVYLQN 281

Query: 71  QLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGS 130
           +L+  +LK   + I  V +GI+++  + Q ++VL+++D++ +  QL ++AG+R+WFG GS
Sbjct: 282 KLIFDILK-EKSQIRCVDEGINLIKQQFQHRRVLVIMDNIDEEVQLCAIAGSRDWFGPGS 340

Query: 131 RIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYA 190
           RIIIT+RDE LL    VD+VY    +N DEA++LF+  AF    P +E + LS  ++ Y 
Sbjct: 341 RIIITTRDERLLLN--VDKVYPLQEMNEDEAMELFSWHAFGNRWPNEEYLGLSKNVVSYC 398

Query: 191 GGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIA 250
           GGLPLALEVLGSFL  R++ EW+S LE+L+  P  +I++ L+ISF+GL + EK IFLDI+
Sbjct: 399 GGLPLALEVLGSFLFKRTIAEWKSQLEKLKRAPYEKIINPLRISFEGLDDKEKAIFLDIS 458

Query: 251 CFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQS 310
           CFF G D+DY+   L+ CGF   IGI VL E+CLITV +N                    
Sbjct: 459 CFFIGKDKDYIAKILDSCGFSATIGISVLRERCLITVEDNKF------------------ 500

Query: 311 PEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD-NYHHENEVYLCASAKAFSKMTNLR 369
           P++ GK SRLW  +EV  VLT ++GT  +EG+ L   Y + N  ++    KAF+KM  LR
Sbjct: 501 PDQPGKWSRLWNRQEVTDVLTNNSGTGKIEGLALRLPYDYGNTSFI---TKAFAKMKKLR 557

Query: 370 LLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSN-LQMDKTIEIYMCYSRIGELWKGI 428
           LL +  + L    ++L   LR+L W    LK +P +    DK + + M  S + ++W+G 
Sbjct: 558 LLMLYAVDLNGEYKHLPKELRVLNWIFCRLKSIPDDFFNQDKLVVLEMRRSSLVQVWEGS 617

Query: 429 KHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKD 488
           K L  LK + LS S  L + PDF+  PNLE+LIL+ C  L EIHPS + H K + L+   
Sbjct: 618 KSLHNLKTLDLSSSWYLQKSPDFSQVPNLEELILQSCYSLSEIHPS-IGHLKRLSLSKSV 676

Query: 489 CTSLIT-----------LPGKILMKSLEK--LNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
            T L+T           +   I +++LE     ++ +P +I GLK L+ L ++G+ KFR 
Sbjct: 677 ETLLLTGCFDFRELHEDIGEMISLRTLEADHTAIREVPPSIVGLKNLTRLSLNGN-KFRS 735

Query: 536 FPEIVEHMEHLSELH-LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
            P    ++  LS+L  L   A R L   ++L + L +L   +C +LE +P   S +  +R
Sbjct: 736 LP----NLSGLSKLETLWLNASRYLCTILDLPTNLKVLLADDCPALETMP-DFSEMSNMR 790

Query: 595 SLKLSGCSKLKKFPEIVRSMKDL 617
            L +S  +KL + P + +S+  +
Sbjct: 791 ELDVSDSAKLTEVPGLDKSLNSM 813



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 156/355 (43%), Gaps = 87/355 (24%)

Query: 569 LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSI 627
           LV+L ++    +++   + S L  L++L LS    L+K P+  + + +L EL L    S+
Sbjct: 600 LVVLEMRRSSLVQVWEGSKS-LHNLKTLDLSSSWYLQKSPDFSQ-VPNLEELILQSCYSL 657

Query: 628 KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
            E+  SI  L +L L                   KS++TL L+GCF    + E +G++ S
Sbjct: 658 SEIHPSIGHLKRLSLS------------------KSVETLLLTGCFDFRELHEDIGEMIS 699

Query: 688 LEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPS 747
           L  L+   TA+         +P            PS+ GL +L +L+             
Sbjct: 700 LRTLEADHTAIRE-------VP------------PSIVGLKNLTRLS------------- 727

Query: 748 DIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGC 807
                       L+ N F SLP +++ LSKL  + L   + L ++  LP N++ +  + C
Sbjct: 728 ------------LNGNKFRSLP-NLSGLSKLETLWLNASRYLCTILDLPTNLKVLLADDC 774

Query: 808 ASLVTLLDALKLCK------SDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHL- 860
            +L T+ D  ++        SDS  +  +  L    N S+ +  ++      ++ R+++ 
Sbjct: 775 PALETMPDFSEMSNMRELDVSDSAKLTEVPGLDKSLN-SMVWIDMKRCTNLTADFRKNIL 833

Query: 861 ---------SVVVPGSEIPEWFMYQNEGSSITVT-RPSNLYNKKKLVGYAICCVF 905
                     + + G+ +P+WF + NEG+ ++    P++ +N K   G  + C+F
Sbjct: 834 QGWTSCGLGGIALHGNYVPDWFAFVNEGTQVSFDILPTDDHNFK---GLTLFCLF 885


>gi|357499833|ref|XP_003620205.1| Disease resistance protein [Medicago truncatula]
 gi|355495220|gb|AES76423.1| Disease resistance protein [Medicago truncatula]
          Length = 1318

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 314/968 (32%), Positives = 476/968 (49%), Gaps = 148/968 (15%)

Query: 11   LMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQ 69
            L++ G +D V+M+GI G+GG+GKTT+A  VY+ I H+F+ S FL+ VRE S K GL+ LQ
Sbjct: 200  LLNDGPNDKVQMVGIHGIGGIGKTTLALAVYNSIVHQFQGSCFLEKVRENSDKNGLIHLQ 259

Query: 70   RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG 129
            + LLSQ++   +  + +V  GI +L  R  +KKVLL++DDV   +QL+++AG  +WFG G
Sbjct: 260  KILLSQVVGEKNIELTSVRQGISILQKRFHQKKVLLLLDDVDKEEQLEAIAGRSDWFGRG 319

Query: 130  SRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLF------------------------ 165
            SR+IIT+RD+ LL  HGV+  Y+ +GLN  +A +L                         
Sbjct: 320  SRVIITTRDKRLLTYHGVERTYEVNGLNDQDAFELVILKAFKNKFSPSYKDALFAQYGSL 379

Query: 166  -------NMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLER 218
                    +KAFKT +     V +  R I YA GLPLALEV+GS    +++++ +  L+R
Sbjct: 380  LDVNKLPRLKAFKTDEVFSGYVHVILRAISYASGLPLALEVIGSHFFNKTIEQCKYALDR 439

Query: 219  LEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIG--I 276
             E  P  +I  ILQ+SFD LQE EK +FLDIAC FKG     V   L    +  ++   I
Sbjct: 440  YERIPDKKIQTILQLSFDALQEEEKSVFLDIACCFKGYKWTRVEQILNA-HYDNIMKDHI 498

Query: 277  RVLIEKCLI-TVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTG 335
             VL+EK LI T  +  + +HDL++++G++IV+++SPE+ GKRSRLW  +++  VL E+TG
Sbjct: 499  DVLVEKSLIKTSMSGNVTLHDLIEDMGKEIVRQESPEDPGKRSRLWSSKDIIQVLEENTG 558

Query: 336  TELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLL--- 392
            T  +E I        + + +    +AF KM NLR L I + Q     + L N LR+L   
Sbjct: 559  TSKIEIIC-----PSSRIEVEWDEEAFKKMENLRTLIIMDGQFTESPKNLPNSLRILEHH 613

Query: 393  ---GWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMP 449
                W G P +F P  L + K I  Y       + +K       ++V+   H ++L R+P
Sbjct: 614  LYPSW-GLPSQFYPRKLAICK-IPSYSTSFAWDDFFKKASKFKNIRVLSFDHHKSLTRIP 671

Query: 450  DFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNL 509
            D +G  NLE+L  + C  L  +  S+     L  L    C  L ++P  + + SLE+L+L
Sbjct: 672  DISGLVNLEELSFQDCVNLITVDDSVGFLGNLKTLRAMRCIKLRSIP-PLKLASLEELDL 730

Query: 510  ------KSLPTTISGL-KCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT-AIRGLPL 561
                  +S P  + GL   L T+ V   +K R  P +   +  L EL L    ++   PL
Sbjct: 731  SQCSCLESFPPVVDGLVDKLKTMTVRSCVKLRSIPTL--KLTSLEELDLSNCFSLESFPL 788

Query: 562  SIE-LLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL 620
             ++  L  L +L +K CR+L  +P     L  L  L LS C  L+ FP +V         
Sbjct: 789  VVDGFLGKLKILLVKYCRNLRSIPPL--RLDSLEKLDLSHCYSLESFPTVV--------- 837

Query: 621  FLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
              DG           LL KL+ L++  C  L  +PS  + L SL+  NLS C  LE  P+
Sbjct: 838  --DG-----------LLDKLKFLSMEHCVKLTSIPS--LRLTSLERFNLSHCLSLERFPK 882

Query: 681  TLGQIESLEELDISGTAV-----------PHSTSWYSYIPINLM--RKSVALKLPSLS-- 725
             LG++ ++ E+ +  T +           P  T +     +  +  R +V  KL   +  
Sbjct: 883  ILGEMNNITEIHLDNTLIQELPFPFQNLTPPQTLYQCNCGVVYLSNRAAVMSKLAEFTIQ 942

Query: 726  --------GLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSK 777
                        +  + L +C   +  L + +    ++KEL+LS N F  LP SI     
Sbjct: 943  AEEKVSPMQSSHVEYICLRNCKFSDEYLSTGLMLFTNVKELHLSDNQFKILPKSIEKCHF 1002

Query: 778  LLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLG 837
            L  + L++C+ LQ +  +PP ++ +    C SL +       CKS               
Sbjct: 1003 LQRLVLDNCEELQEIEGIPPCLKTLSALNCKSLTS------PCKS--------------- 1041

Query: 838  NKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQN-EGSSITVTRPSNLYNKKKL 896
                   +L + L    NT   L    P + IPEWF +Q   G SI+       + + K 
Sbjct: 1042 ------KLLNQELHEAGNTWFRL----PRTRIPEWFDHQCLAGLSIS------FWFRNKF 1085

Query: 897  VGYAICCV 904
               A+C V
Sbjct: 1086 PVIALCVV 1093



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 13/98 (13%)

Query: 239  QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPV---IGIRVLIEKCLITVHNNTLWMH 295
            +++ +  FLDI C FKG +   V N L  C  H       I+V I++ LI        +H
Sbjct: 1226 RKISRVFFLDIVCCFKGYESIKVQNTL--CTHHSYNVKDQIKVPIDESLI--------IH 1275

Query: 296  DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTES 333
            DL++++ +++V R+SP E GK  RLW  E+  +VL E+
Sbjct: 1276 DLIEKMAKELVHRESPMESGKCGRLWLLEDTIYVLMEN 1313


>gi|357439719|ref|XP_003590137.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355479185|gb|AES60388.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 859

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 237/565 (41%), Positives = 341/565 (60%), Gaps = 48/565 (8%)

Query: 3   SRCEKLRFLMD-SGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI-S 60
           SR E +  L++   S+DV ++GI GMGGLGKTT+A+ +Y+ I  +FE   FL N+RE+  
Sbjct: 187 SRVEDVTNLLNIQNSNDVLLLGIWGMGGLGKTTLAKAIYNQIGIKFEGRSFLLNIREVWE 246

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +    VSLQ  LL +                     RL +K+VLLV+DDV  + QL++L 
Sbjct: 247 TDTNQVSLQENLLKE---------------------RLAQKRVLLVLDDVNKLDQLKALC 285

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G+R+WFG GSR+IIT+RD  LL++  VD VY    ++  E+L+LF   AFK   P +   
Sbjct: 286 GSRKWFGPGSRVIITTRDMRLLRSCRVDLVYTVVEMDERESLELFCWHAFKQPCPPEGFA 345

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
             S  +I Y+GGLPLAL+VLGS+LSG    EW+  LE+L+  P  ++   L++SFDGL++
Sbjct: 346 THSRDVIVYSGGLPLALQVLGSYLSGCETTEWQKVLEKLKCIPHDQVQKKLKVSFDGLKD 405

Query: 241 L-EKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLL 298
           + EK+IF DIACFF G D++ +   L GCG+   IGI VL+++ L+TV   N L MHDLL
Sbjct: 406 VTEKQIFFDIACFFIGMDKNDIIQILNGCGYFGDIGIEVLVQQSLVTVDIGNKLRMHDLL 465

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           +++G+QIV  +SP     RSRLW  EEV  +L+   GTE V+G+ L+ +  E    +C  
Sbjct: 466 RDMGRQIVYEESPFHPEMRSRLWFREEVFDMLSNHKGTEAVKGLALE-FPRE----VCLE 520

Query: 359 AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
            K+F KM  LRLL++  ++L    +YLS  L+ L W G+P  ++P+  Q+   + + + Y
Sbjct: 521 TKSFKKMNKLRLLRLAGVKLKGDFKYLSGDLKWLYWHGFPETYVPAEFQLGSLVVMELKY 580

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           S++ ++W   + L+ LKV+ LSHS +L   PDF+  PNLEKLILE C  L  +  S+   
Sbjct: 581 SKLKQIWNKSQMLENLKVLNLSHSLDLTETPDFSYMPNLEKLILEDCPSLSTVSHSIGSL 640

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
           +K++++N+ DCT L TLP     KS+ K  LKSL T I  L   S LD   DL       
Sbjct: 641 HKILLINLTDCTGLRTLP-----KSIYK--LKSLATLI--LSGCSMLDKLEDL------- 684

Query: 539 IVEHMEHLSELHLEGTAIRGLPLSI 563
             E ME L+ L  + TAI  +P S+
Sbjct: 685 --EQMESLTTLIADKTAIPEVPSSL 707



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 101/204 (49%), Gaps = 22/204 (10%)

Query: 502 KSLEKLNLKSLPTTISGLKCLSTLD-VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLP 560
           KS +K+N   L   ++G+K       +SGDLK+               L+  G     +P
Sbjct: 522 KSFKKMNKLRL-LRLAGVKLKGDFKYLSGDLKW---------------LYWHGFPETYVP 565

Query: 561 LSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL 620
              +L S LV++ LK  +  +I   +   L+ L+ L LS    L + P+    M +L +L
Sbjct: 566 AEFQLGS-LVVMELKYSKLKQIWNKS-QMLENLKVLNLSHSLDLTETPDF-SYMPNLEKL 622

Query: 621 FL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVP 679
            L D  S+  V  SI  L K+ L+NL+DC  L  LP SI  LKSL TL LSGC  L+ + 
Sbjct: 623 ILEDCPSLSTVSHSIGSLHKILLINLTDCTGLRTLPKSIYKLKSLATLILSGCSMLDKL- 681

Query: 680 ETLGQIESLEELDISGTAVPHSTS 703
           E L Q+ESL  L    TA+P   S
Sbjct: 682 EDLEQMESLTTLIADKTAIPEVPS 705


>gi|227438289|gb|ACP30634.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1251

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 257/697 (36%), Positives = 384/697 (55%), Gaps = 69/697 (9%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MD++ +++  L+   S DVR IGI G  G+GKT I   ++  IS +++   FL N+ E  
Sbjct: 560  MDTQVDEVLSLLRIESLDVRGIGIWGTAGIGKTAITEKIFRRISVQYKTCVFLKNLHEQV 619

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFD-GIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
             + G V+++ + LS++L++ + S+  +FD     L S+L+ KKVL+V+DDV D K +++ 
Sbjct: 620  EEKGQVTMREEFLSKILEV-EASLLRIFDINKSFLRSKLRCKKVLVVLDDVNDCKDIETF 678

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
             G+ ++ G GSRIIITSR+  +     +D +Y+   L+   +L+  +     T    +  
Sbjct: 679  LGDLKYLGGGSRIIITSRNRRVFVQTEMDHIYEVKPLDISSSLRFLDDGTSMTSANYR-- 736

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             + S  ++ YA G P   EVL  ++  R   E+    + +    P  I  IL+  + GL 
Sbjct: 737  -KQSLELVIYANGNP---EVL-HYMKSRFQKEFDQLSQEVLQTSPICIPRILRSCY-GLD 790

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
            E E  I LDIACFF+  DRD V   L+GCGF   +G R L +K L+T+ +N L MH  +Q
Sbjct: 791  ENEMNILLDIACFFRKMDRDGVAMLLDGCGFFAHVGFRNLFDKSLLTISHNLLNMHRFIQ 850

Query: 300  ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
              G++IV+++S  E GKRSRLW  EE+  V    TGT  +EGI LD    + +    A+ 
Sbjct: 851  ATGREIVRQESGNEPGKRSRLWNAEEIMDVFLNDTGTSAIEGIFLDIPRRKFD----ANP 906

Query: 360  KAFSKMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
              F KM NLRLLK           + LP+GLEYL  +LRLL W  YPL  LP +      
Sbjct: 907  NIFEKMRNLRLLKFYYSEVINSVGVSLPHGLEYLPGKLRLLHWEYYPLSSLPQSFDPKNL 966

Query: 412  IEIYMCYSRIGELWKG--------------------------IKHLDKLKVMILSHSENL 445
            +E+ +  S   +LWKG                          ++ L+KLK M LS+S  L
Sbjct: 967  LELNLPNSCAKKLWKGKKASFKITILTIQLNMRNPEMLMMSLLQSLEKLKKMRLSYSCQL 1026

Query: 446  IRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLE 505
             ++P F+ APNLE L LEGC  L  I  S+    KL+ LN+KDC+ L ++P  ++++SLE
Sbjct: 1027 TKIPRFSSAPNLELLDLEGCNSLVSISQSICYLTKLVSLNLKDCSKLESIPSTVVLESLE 1086

Query: 506  KLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIEL 565
             LN                  +SG  K   FPEI  +++   +L++ GT I+ +P SI+ 
Sbjct: 1087 VLN------------------ISGCSKLMNFPEISPNVK---QLYMGGTIIQEIPPSIKN 1125

Query: 566  LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT 625
            L  L +L+L+N + L  LP ++  LK L +L LSGCS L++FP + R MK L  L L  T
Sbjct: 1126 LVLLEILDLENSKHLVNLPTSICKLKHLETLNLSGCSSLERFPGLSRKMKCLKSLDLSRT 1185

Query: 626  SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
            +IKE+ SS+  LT LE L L++C+NL  LP  + +L+
Sbjct: 1186 AIKELHSSVSYLTALEELRLTECRNLASLPDDVWSLR 1222



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 122/225 (54%), Gaps = 13/225 (5%)

Query: 576  NCRSLEILPVTV-SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSS 633
            N R+ E+L +++  +L+ L+ ++LS   +L K P    S  +L  L L+G  S+  +  S
Sbjct: 997  NMRNPEMLMMSLLQSLEKLKKMRLSYSCQLTKIPRF-SSAPNLELLDLEGCNSLVSISQS 1055

Query: 634  IELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDI 693
            I  LTKL  LNL DC  L  +PS+++ L+SL+ LN+SGC KL N PE    ++   +L +
Sbjct: 1056 ICYLTKLVSLNLKDCSKLESIPSTVV-LESLEVLNISGCSKLMNFPEISPNVK---QLYM 1111

Query: 694  SGT---AVPHSTSWYSYIPI-NLMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSD 748
             GT    +P S      + I +L      + LP S+  L  L  LNL+ C+ +E   P  
Sbjct: 1112 GGTIIQEIPPSIKNLVLLEILDLENSKHLVNLPTSICKLKHLETLNLSGCSSLE-RFPGL 1170

Query: 749  IGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
               +  LK L LS+ +   L +S+++L+ L  + L +C+ L SLP
Sbjct: 1171 SRKMKCLKSLDLSRTAIKELHSSVSYLTALEELRLTECRNLASLP 1215


>gi|357500597|ref|XP_003620587.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|357500703|ref|XP_003620640.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495602|gb|AES76805.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495655|gb|AES76858.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1094

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 242/617 (39%), Positives = 357/617 (57%), Gaps = 64/617 (10%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVREISS-KGGLVSLQRQLLSQLLKLADNSIWNVFDG 90
           KTT+A  +YD ISH F AS ++D+V +I S   G ++ Q+Q+L Q L +  + I N ++ 
Sbjct: 230 KTTLAMALYDQISHRFSASCYIDDVTKIYSLHDGPLNAQKQILFQTLGIEHHLISNRYNA 289

Query: 91  IDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEV 150
            D++  RL+R+KVLL++D+V +V+QL+ +A +REW G+GSRI++ SRDEH+LK +GVD  
Sbjct: 290 TDLIRRRLRREKVLLILDNVNEVEQLEKIAVHREWLGAGSRIVVISRDEHILKEYGVDVF 349

Query: 151 YKPHGLNYDEALQLFNMKAFKTYQPLQECVQ-LSARIIRYAGGLPLALEVLGSFLSGRSV 209
           YK   LN  E+ +LF  KAFK    +    Q L+  I+ YA GLPLA+ +LGSFL GR+V
Sbjct: 350 YKVPLLNMAESHKLFCRKAFKLENIILGNYQNLADEILSYANGLPLAITILGSFLFGRNV 409

Query: 210 DEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCG 269
            EW+S L RL   P  +++++L +SFDGL+E E++IFLDIACFF     + V N L  CG
Sbjct: 410 TEWKSALARLRESPNKDVMNVLHLSFDGLEETEQEIFLDIACFFNSWPMEEVKNILNCCG 469

Query: 270 FHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHV 329
           FH  IG+RVL +K LI  + + + +H LL+ELG++IVQ  S +E  K SR+W ++++ +V
Sbjct: 470 FHADIGLRVLNDKSLINTNYSHIEIHSLLEELGRKIVQENSSKEQRKWSRVWSKKQLYNV 529

Query: 330 LTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEY-LSNR 388
           + E+     VE IVL+      E+ +  +A+  SKM NLR L        +G  +  SN+
Sbjct: 530 MVENMQKH-VEAIVLN-----EEIDM--NAEHVSKMNNLRFLIFKYGGCISGSPWSFSNK 581

Query: 389 LRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRM 448
           L+ + W  YP K+LPSN   ++ +E+ +  S+I +LW   K+L  LK + L HS  L+++
Sbjct: 582 LKYVDWHEYPFKYLPSNFHPNELVELILKSSKIEQLWTNKKYLPNLKHLDLRHSLELVKI 641

Query: 449 PDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKIL-MKSLEKL 507
            DF   PNLEKL LEGC  L E+ PS+ L  KL+ LN+ +C +L+++P  I  + SLE L
Sbjct: 642 LDFGEFPNLEKLNLEGCINLVELDPSIGLLRKLVYLNLYECKNLVSIPNNIFSLSSLEDL 701

Query: 508 NLK-------------------------------------------SLPT-------TIS 517
           N+                                            S PT       ++ 
Sbjct: 702 NMYGCSKVFKNPMHLKKKHDISESASHSRSMSSVFKWIMLPHHLRFSAPTRHTYLLPSLH 761

Query: 518 GLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNC 577
            L CL  +D+S      + P+ +E +  L  L+LEG     LP S+  LS LV LNL++C
Sbjct: 762 SLVCLRDVDISF-CHLSQVPDAIECLYSLERLNLEGNNFVTLP-SLRKLSKLVYLNLQHC 819

Query: 578 RSLEILPVTVSNLKCLR 594
             LE LP   S    +R
Sbjct: 820 MLLESLPQLPSPTNIIR 836



 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 159/570 (27%), Positives = 251/570 (44%), Gaps = 94/570 (16%)

Query: 481  LIILNMKDCTSLITLPGKILMKS--LEKLN-LKSLPTTISGLKCLSTLDVSGDLKFREFP 537
            +++ NM+     I L  +I M +  + K+N L+ L     G    S    S  LK+ ++ 
Sbjct: 529  VMVENMQKHVEAIVLNEEIDMNAEHVSKMNNLRFLIFKYGGCISGSPWSFSNKLKYVDWH 588

Query: 538  EIVE-------HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPV-TVSN 589
            E          H   L EL L+ + I  L  + + L  L  L+L++  SLE++ +     
Sbjct: 589  EYPFKYLPSNFHPNELVELILKSSKIEQLWTNKKYLPNLKHLDLRH--SLELVKILDFGE 646

Query: 590  LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK 649
               L  L L GC                        ++ E+  SI LL KL  LNL +CK
Sbjct: 647  FPNLEKLNLEGC-----------------------INLVELDPSIGLLRKLVYLNLYECK 683

Query: 650  NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIP 709
            NLV +P++I +L SL+ LN+ GC K+   P  L +   + E      ++     W   +P
Sbjct: 684  NLVSIPNNIFSLSSLEDLNMYGCSKVFKNPMHLKKKHDISESASHSRSMSSVFKWI-MLP 742

Query: 710  INLMRKSVALK----LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSF 765
             +L R S   +    LPSL  L  LR ++++ C+L +  +P  I  L SL+ L L  N+F
Sbjct: 743  HHL-RFSAPTRHTYLLPSLHSLVCLRDVDISFCHLSQ--VPDAIECLYSLERLNLEGNNF 799

Query: 766  VSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDST 825
            V+LP S+  LSKL+ + L+ C  L+SLPQLP     +R N             +  +   
Sbjct: 800  VTLP-SLRKLSKLVYLNLQHCMLLESLPQLPSPTNIIRENN--------KYFWIWPTGLF 850

Query: 826  MIACLDSLKLLGNKSLAFSMLREYLEAVSNTR----QHLSVVVPGSEIPEWFMYQNEGSS 881
            +  C    +     S+ FS L +++EA S +       + +V PG+EIP W   ++ G S
Sbjct: 851  IFNCPKLGERERCSSMTFSWLTQFIEANSQSYPTSFDWIQIVTPGNEIPIWINNKSVGDS 910

Query: 882  ITVTRPSNLY-NKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQ---------LNCHIGH 931
            I + R   ++ N   ++G+  C VF     S   +C+  +P  Q         ++C    
Sbjct: 911  IQIDRSPIMHDNNNYIIGFLCCAVF-----SMAPDCW-MFPFAQEWTDKKLIRMSCRSAT 964

Query: 932  GIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQ-- 989
             I   G         S HLW++Y  R++              FE  H N+ FE   G+  
Sbjct: 965  VILNGG----LVMTKSSHLWIIYFPRES-----------YSEFEKIHFNI-FE---GEDF 1005

Query: 990  GLEVKMCGLHPVYMDEVEELDQTTNQPSRF 1019
             LEVK CG   V  ++++E + T      F
Sbjct: 1006 SLEVKSCGYRWVCKEDLQEFNLTMMNQENF 1035


>gi|358347701|ref|XP_003637894.1| Elongation factor Ts [Medicago truncatula]
 gi|355503829|gb|AES85032.1| Elongation factor Ts [Medicago truncatula]
          Length = 1319

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 258/649 (39%), Positives = 369/649 (56%), Gaps = 75/649 (11%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR E L+  +   S D VR+IGI GMGG+GKTT+A  +Y  I H F+AS F+D+V +I
Sbjct: 198 INSRTEALKHQLLLNSVDGVRVIGIWGMGGIGKTTLAMNLYGQICHRFDASCFIDDVSKI 257

Query: 60  SS-KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
                G +  Q+Q+L Q L +  + I N +   D++  RL R+K LL++D+V  V+QL+ 
Sbjct: 258 FRLHDGPIDAQKQILHQTLGIEHHQICNHYSATDLIRHRLSREKTLLILDNVDQVEQLER 317

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           +  +REW G+GSRI+I SRDEH+LK + VD VYK   L++ E+ +LF  KAFK  + + +
Sbjct: 318 IGVHREWLGAGSRIVIISRDEHILKEYKVDVVYKVPLLDWTESHKLFCQKAFKLEKIIMK 377

Query: 179 CVQ-LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
             Q L+  I+ YA GLPLA+ VLGSFLSGR+V EW+S L RL   P  +++D+LQ+S+DG
Sbjct: 378 NYQNLAYEILNYANGLPLAITVLGSFLSGRNVTEWKSALARLRQSPNKDVMDVLQLSYDG 437

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDL 297
           L+E EK+IFLDIACFF   +   + N L  CGFH  IG  VLI+K LIT+H + + MH L
Sbjct: 438 LEETEKEIFLDIACFFNSRNEKIIKNILNCCGFHADIGFIVLIDKSLITIHGSIVEMHSL 497

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           L+ELG++IVQ  S +E  K SR+W ++++ +V  E+     VE +V      +N  +L  
Sbjct: 498 LEELGRKIVQENSSKEQRKWSRMWSKQQLYNVTMENMEKH-VEAVVFFGGIDKNVEFL-- 554

Query: 358 SAKAFSKMTNLRLL--------KICNLQLPNGLEY-LSNRLRLLGWRGYPLKFLPSNLQM 408
                S M+NLRLL         I N +L     Y LSN+LR + W GYP K+LPS+   
Sbjct: 555 -----STMSNLRLLIIRHDEYYMINNYELVMLKPYSLSNKLRYVQWTGYPFKYLPSSFHP 609

Query: 409 DKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
            + +E+ +  S I +LWK  KHL  L+ + LS S+ L ++ DF   PNLE L LE C +L
Sbjct: 610 AELVELILVRSCIKQLWKNKKHLPNLRRLDLSDSKKLEKIEDFGQFPNLEWLNLERCIKL 669

Query: 469 YEIHPSLLLHNKLIILNMKDCTSLITLPGKIL-MKSLEKLNLK----------------- 510
            E+ PS+ L  KL+ LN++ C +L+++P  I  + SL+ LN+                  
Sbjct: 670 VELDPSIGLLRKLVYLNLERCYNLVSIPNNIFGLSSLKYLNMSGCSKLMKPGISSEKKNK 729

Query: 511 ----------------------------SLPTT-------ISGLKCLSTLDVSGDLKFRE 535
                                       S P T          L CL  +D+S       
Sbjct: 730 HDIRESTSHCRSTSSVFKLFIFPNNASFSAPVTHTYKLPCFRILYCLRNIDISF-CHLSH 788

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
            P+ +E +  L  L+L G     LP S+  LS LV LNL++C+ LE LP
Sbjct: 789 VPDAIECLHRLERLNLGGNNFVTLP-SMRKLSRLVYLNLEHCKLLESLP 836



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 217/485 (44%), Gaps = 49/485 (10%)

Query: 546  LSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
            L  +   G   + LP S      + L+ +++C  ++ L     +L  LR L LS   KL+
Sbjct: 590  LRYVQWTGYPFKYLPSSFHPAELVELILVRSC--IKQLWKNKKHLPNLRRLDLSDSKKLE 647

Query: 606  KFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSL 664
            K  E      +L  L L+    + E+  SI LL KL  LNL  C NLV +P++I  L SL
Sbjct: 648  KI-EDFGQFPNLEWLNLERCIKLVELDPSIGLLRKLVYLNLERCYNLVSIPNNIFGLSSL 706

Query: 665  KTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYS-YIPINLMRKSVAL---- 719
            K LN+SGC KL   P    + ++  ++  S +    ++S +  +I  N    S  +    
Sbjct: 707  KYLNMSGCSKLMK-PGISSEKKNKHDIRESTSHCRSTSSVFKLFIFPNNASFSAPVTHTY 765

Query: 720  KLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLL 779
            KLP    L  LR ++++ C+L    +P  I  L  L+ L L  N+FV+LP S+  LS+L+
Sbjct: 766  KLPCFRILYCLRNIDISFCHL--SHVPDAIECLHRLERLNLGGNNFVTLP-SMRKLSRLV 822

Query: 780  NIELEDCKRLQSLPQLP------PNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSL 833
             + LE CK L+SLPQLP      P+  +         + + +  KL + +          
Sbjct: 823  YLNLEHCKLLESLPQLPFPSTIGPDYHENNEYYWTKGLVIFNCPKLGERECC-------- 874

Query: 834  KLLGNKSLAFSMLREYLEAVSNTR----QHLSVVVPGSEIPEWFMYQNEGSSITVTRPSN 889
                  S+ FS ++++++A   +       L +V PGSEIP W   Q+ G SI +     
Sbjct: 875  -----SSITFSWMKQFIQANQQSYGPYLYELQIVTPGSEIPSWINNQSMGGSILIDESPV 929

Query: 890  LY-NKKKLVGYAICCVFHVLKNSRGN-NCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGS 947
            ++ NK  ++G+  C VF +    +    C       ++        + +          S
Sbjct: 930  IHDNKNNIIGFVFCAVFCMAPQDQTMIECLPLSVYMKMGDERNCRKFPVIIDRDLIPTKS 989

Query: 948  DHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVE 1007
             HLWL+Y  R+  YD+          F +  +  +       G++VK CG   V    ++
Sbjct: 990  SHLWLVYFPREY-YDV----------FGTIRIYCTRYGRQVVGMDVKCCGYRWVCKQNLQ 1038

Query: 1008 ELDQT 1012
            E + T
Sbjct: 1039 EFNLT 1043


>gi|357500581|ref|XP_003620579.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495594|gb|AES76797.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1594

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 258/649 (39%), Positives = 369/649 (56%), Gaps = 75/649 (11%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR E L+  +   S D VR+IGI GMGG+GKTT+A  +Y  I H F+AS F+D+V +I
Sbjct: 198 INSRTEALKHQLLLNSVDGVRVIGIWGMGGIGKTTLAMNLYGQICHRFDASCFIDDVSKI 257

Query: 60  SS-KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
                G +  Q+Q+L Q L +  + I N +   D++  RL R+K LL++D+V  V+QL+ 
Sbjct: 258 FRLHDGPIDAQKQILHQTLGIEHHQICNHYSATDLIRHRLSREKTLLILDNVDQVEQLER 317

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           +  +REW G+GSRI+I SRDEH+LK + VD VYK   L++ E+ +LF  KAFK  + + +
Sbjct: 318 IGVHREWLGAGSRIVIISRDEHILKEYKVDVVYKVPLLDWTESHKLFCQKAFKLEKIIMK 377

Query: 179 CVQ-LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
             Q L+  I+ YA GLPLA+ VLGSFLSGR+V EW+S L RL   P  +++D+LQ+S+DG
Sbjct: 378 NYQNLAYEILNYANGLPLAITVLGSFLSGRNVTEWKSALARLRQSPNKDVMDVLQLSYDG 437

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDL 297
           L+E EK+IFLDIACFF   +   + N L  CGFH  IG  VLI+K LIT+H + + MH L
Sbjct: 438 LEETEKEIFLDIACFFNSRNEKIIKNILNCCGFHADIGFIVLIDKSLITIHGSIVEMHSL 497

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           L+ELG++IVQ  S +E  K SR+W ++++ +V  E+     VE +V      +N  +L  
Sbjct: 498 LEELGRKIVQENSSKEQRKWSRMWSKQQLYNVTMENMEKH-VEAVVFFGGIDKNVEFL-- 554

Query: 358 SAKAFSKMTNLRLL--------KICNLQLPNGLEY-LSNRLRLLGWRGYPLKFLPSNLQM 408
                S M+NLRLL         I N +L     Y LSN+LR + W GYP K+LPS+   
Sbjct: 555 -----STMSNLRLLIIRHDEYYMINNYELVMLKPYSLSNKLRYVQWTGYPFKYLPSSFHP 609

Query: 409 DKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
            + +E+ +  S I +LWK  KHL  L+ + LS S+ L ++ DF   PNLE L LE C +L
Sbjct: 610 AELVELILVRSCIKQLWKNKKHLPNLRRLDLSDSKKLEKIEDFGQFPNLEWLNLERCIKL 669

Query: 469 YEIHPSLLLHNKLIILNMKDCTSLITLPGKIL-MKSLEKLNLK----------------- 510
            E+ PS+ L  KL+ LN++ C +L+++P  I  + SL+ LN+                  
Sbjct: 670 VELDPSIGLLRKLVYLNLERCYNLVSIPNNIFGLSSLKYLNMSGCSKLMKPGISSEKKNK 729

Query: 511 ----------------------------SLPTT-------ISGLKCLSTLDVSGDLKFRE 535
                                       S P T          L CL  +D+S       
Sbjct: 730 HDIRESTSHCRSTSSVFKLFIFPNNASFSAPVTHTYKLPCFRILYCLRNIDISF-CHLSH 788

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
            P+ +E +  L  L+L G     LP S+  LS LV LNL++C+ LE LP
Sbjct: 789 VPDAIECLHRLERLNLGGNNFVTLP-SMRKLSRLVYLNLEHCKLLESLP 836



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 218/485 (44%), Gaps = 49/485 (10%)

Query: 546  LSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
            L  +   G   + LP S      + L+ +++C  ++ L     +L  LR L LS   KL+
Sbjct: 590  LRYVQWTGYPFKYLPSSFHPAELVELILVRSC--IKQLWKNKKHLPNLRRLDLSDSKKLE 647

Query: 606  KFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSL 664
            K  E      +L  L L+    + E+  SI LL KL  LNL  C NLV +P++I  L SL
Sbjct: 648  KI-EDFGQFPNLEWLNLERCIKLVELDPSIGLLRKLVYLNLERCYNLVSIPNNIFGLSSL 706

Query: 665  KTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYS-YIPINLMRKSVAL---- 719
            K LN+SGC KL   P    + ++  ++  S +    ++S +  +I  N    S  +    
Sbjct: 707  KYLNMSGCSKLMK-PGISSEKKNKHDIRESTSHCRSTSSVFKLFIFPNNASFSAPVTHTY 765

Query: 720  KLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLL 779
            KLP    L  LR ++++ C+L    +P  I  L  L+ L L  N+FV+LP S+  LS+L+
Sbjct: 766  KLPCFRILYCLRNIDISFCHL--SHVPDAIECLHRLERLNLGGNNFVTLP-SMRKLSRLV 822

Query: 780  NIELEDCKRLQSLPQLP------PNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSL 833
             + LE CK L+SLPQLP      P+  +         + + +  KL + +     C    
Sbjct: 823  YLNLEHCKLLESLPQLPFPSTIGPDYHENNEYYWTKGLVIFNCPKLGERE----CC---- 874

Query: 834  KLLGNKSLAFSMLREYLEAVSNTR----QHLSVVVPGSEIPEWFMYQNEGSSITVTRPSN 889
                  S+ FS ++++++A   +       L +V PGSEIP W   Q+ G SI +     
Sbjct: 875  -----SSITFSWMKQFIQANQQSYGPYLYELQIVTPGSEIPSWINNQSMGGSILIDESPV 929

Query: 890  LY-NKKKLVGYAICCVFHVLKNSRGN-NCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGS 947
            ++ NK  ++G+  C VF +    +    C       ++        + +          S
Sbjct: 930  IHDNKNNIIGFVFCAVFCMAPQDQTMIECLPLSVYMKMGDERNCRKFPVIIDRDLIPTKS 989

Query: 948  DHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVE 1007
             HLWL+Y  R+  YD+          F +  +  +       G++VK CG   V    ++
Sbjct: 990  SHLWLVYFPREY-YDV----------FGTIRIYCTRYGRQVVGMDVKCCGYRWVCKQNLQ 1038

Query: 1008 ELDQT 1012
            E + T
Sbjct: 1039 EFNLT 1043


>gi|227438217|gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2301

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 255/710 (35%), Positives = 388/710 (54%), Gaps = 53/710 (7%)

Query: 12   MDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQ 71
            MDSG  DVRM+GI GMGG+GK+TIA+ V   +S +F+   FL+N +    + G   ++++
Sbjct: 1592 MDSG--DVRMVGIWGMGGIGKSTIAKFVCKRLSSKFDGVCFLENAKTEFEQYGSSHMRQK 1649

Query: 72   LLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSR 131
            +L ++L+  D + W+   G+  +  RL+ K +LLVID+V  V+QLQ L G+ EWFG GSR
Sbjct: 1650 VLREILRRKDLNSWDGDSGV--MRQRLRGKSILLVIDNVDSVEQLQELVGSLEWFGPGSR 1707

Query: 132  IIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAG 191
            I+IT+RD+ +L+ H V+ +Y+   L   +AL LF+  AFK  +P ++  +LS  I++   
Sbjct: 1708 IVITTRDKRVLEQHDVEYIYEVKPLKTTQALMLFSKHAFKQPRPPKDSAELSIDIVKQLD 1767

Query: 192  GLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIAC 251
            GLPLA+ V G+ L  R + +W   L+ L     S +   L+ SF+ L   EK IFL +AC
Sbjct: 1768 GLPLAIRVAGAALYRRDIADWEYYLDLLRTNVNSSVSKALRESFEALNNQEKLIFLYVAC 1827

Query: 252  FFKGNDRDYVTNFLE------GCGFHPVIGIRVLIEKCLITVHNNT-LWMHDLLQELGQQ 304
             F G     V+  L+         F   + IR L EKCLI++     LW+HD+LQ++ + 
Sbjct: 1828 CFNGKHMHGVSRVLDLFIVSGHMPFRSTLCIRTLKEKCLISISTTQRLWVHDVLQDMARS 1887

Query: 305  IVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVE--GIVLDNYHHENEVYLCASAKAF 362
            I+     E   KR  LW   ++ +VL E+ G+E VE   ++LD    +    LC S   F
Sbjct: 1888 IICEGKEENPWKRKILWNFMDINNVLCENMGSEAVEVESLLLDMPKGKE---LCISPAIF 1944

Query: 363  SKMTNLRLLKICN---------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
             +M NL+LLK  N         + +P GL YL   LR L W+ Y LK LPS       +E
Sbjct: 1945 ERMYNLKLLKFYNNSTGGESSKICMPGGLVYLP-MLRYLHWQAYSLKSLPSRFCTTYLVE 2003

Query: 414  IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
            + +  S +  LW G + L  L+ M L     L+ +P+ + A +LEKL L+ C  L ++  
Sbjct: 2004 LNLPNSSVETLWNGTQDLGNLRRMNLRGCRRLLEVPNLSKATSLEKLNLDNCESLVDLTD 2063

Query: 474  SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKF 533
            S+   N L +L +  C  L  LP  I                   L+ L TL + G    
Sbjct: 2064 SVRHLNNLGVLELSGCKKLKNLPNNI------------------NLRLLRTLHLEGCSSL 2105

Query: 534  REFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCL 593
             +FP + E++  ++   L+ TAI  +P SIE LS L  L+L  C+ L+ LP T+ N+  L
Sbjct: 2106 EDFPFLSENVRKIT---LDETAIEEIPASIERLSELKTLHLSGCKKLKNLPRTIRNIDSL 2162

Query: 594  RSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVR 653
             +L LS C  +  FPE+  +++ L+   L GT+I+EVP++I   ++L  LN+S C+ L  
Sbjct: 2163 TTLWLSNCPNITLFPEVGDNIESLA---LKGTAIEEVPATIGDKSRLCYLNMSGCQRLKN 2219

Query: 654  LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTS 703
            LP ++  L +LK L L GC  +   PET  +   L+ LD++GT++   TS
Sbjct: 2220 LPPTLKNLTNLKFLLLRGCTNITERPETACR---LKALDLNGTSIMEETS 2266



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 140/295 (47%), Gaps = 52/295 (17%)

Query: 542  HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
            ++  L  LH +  +++ LP S    + LV LNL N  S+E L     +L  LR + L GC
Sbjct: 1975 YLPMLRYLHWQAYSLKSLP-SRFCTTYLVELNLPNS-SVETLWNGTQDLGNLRRMNLRGC 2032

Query: 602  SKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
             +L + P + ++   L +L LD   S+ ++  S+  L  L +L LS CK L  LP++I  
Sbjct: 2033 RRLLEVPNLSKAT-SLEKLNLDNCESLVDLTDSVRHLNNLGVLELSGCKKLKNLPNNI-N 2090

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK 720
            L+ L+TL+L GC  LE+ P      E++ ++ +  TA+         IP ++ R      
Sbjct: 2091 LRLLRTLHLEGCSSLEDFPFL---SENVRKITLDETAIEE-------IPASIER------ 2134

Query: 721  LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSL------------ 768
                  L  L+ L+L+ C  ++  LP  I N+ SL  L+LS    ++L            
Sbjct: 2135 ------LSELKTLHLSGCKKLKN-LPRTIRNIDSLTTLWLSNCPNITLFPEVGDNIESLA 2187

Query: 769  ---------PTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR---VNGCASLV 811
                     P +I   S+L  + +  C+RL++LP    N+  ++   + GC ++ 
Sbjct: 2188 LKGTAIEEVPATIGDKSRLCYLNMSGCQRLKNLPPTLKNLTNLKFLLLRGCTNIT 2242


>gi|297850940|ref|XP_002893351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297339193|gb|EFH69610.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1385

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 313/1033 (30%), Positives = 494/1033 (47%), Gaps = 170/1033 (16%)

Query: 8    LRFLMD----SGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS-K 62
            ++ LMD      SS V+++G+ GMGG+GKTT+A+  Y+ I   F+   F+ ++RE SS +
Sbjct: 195  MKDLMDLIVAESSSGVQVLGLYGMGGIGKTTLAKAFYNKIVGNFKQRAFISDIRERSSAE 254

Query: 63   GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGN 122
             GLV+LQ+ L+ +L +L    I +V  G++ +   +  KK+++V+DDV  + Q+ +L G 
Sbjct: 255  DGLVNLQKSLIKELFRLV-TEIEDVSRGLEKIKENVHDKKIIVVLDDVDHIDQVNALVGE 313

Query: 123  REWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQL 182
              W+G G+ I+IT+RD  +L    V++ Y+   L   +ALQLF+  + +  +P    ++L
Sbjct: 314  TRWYGQGTLIVITTRDSEILSKLSVNQQYEVKCLTESQALQLFSYHSLRKEKPTDNLMEL 373

Query: 183  SARIIRYAGGLPLALEVLGSFLSGRSVD-EWRSTLERLEIEPPSEILDILQISFDGLQEL 241
            S +I+R +G LPLA+EV GS L  +  + EW++ L++L+   P  + D+L +SF+ L + 
Sbjct: 374  STKIVRISGLLPLAVEVFGSLLYDKKEEKEWQTQLDKLKKTQPGNLQDVLALSFESLDDE 433

Query: 242  EKKIFLDIACFF--KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLL 298
            EKK+FLDIAC F      ++ V   L+GCGF+    + VL +K L+ +  N+TLWMHD +
Sbjct: 434  EKKVFLDIACLFLRMQITKEEVVEVLKGCGFNAEAALSVLRQKSLVKIFANDTLWMHDQI 493

Query: 299  QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD------------- 345
            +++G+++   +   +   RSRLW   E+  VL    GT  ++GIV D             
Sbjct: 494  RDMGRKMDLTEIHGDPSIRSRLWDRAEIMTVLNNMKGTSSIQGIVFDFKKKPAWDPSAED 553

Query: 346  ----NYHHE---NEVY--------------------LCASAKAFSKMTNLRLLKICNLQL 378
                N         VY                    +    + F  M  LRLL+I ++ L
Sbjct: 554  IALRNLQKSPGIKSVYSYLKNKFIPFREEEKPKSSEITIRVEPFVPMIKLRLLQINHVNL 613

Query: 379  PNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELW----KGIKHL--- 431
               L+ L   L+ + W+G PL+ LP +    +   + +  SRI  +     KG+  L   
Sbjct: 614  EGNLKLLPPELKWIQWKGCPLENLPPDFLAGQLAVLDLSESRIRRVQSLRSKGVGSLIST 673

Query: 432  -----DKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNM 486
                 + LKV+ L    +L  +PD +    LEKL+ E C  L ++  S+    KL+ L++
Sbjct: 674  NGQVDENLKVINLRGCHSLEAIPDLSNHKALEKLVFERCNLLVKVPRSVGNLRKLLQLDL 733

Query: 487  KDCTSLITLPGKIL-MKSLEKL------NLKSLPTTISGLKCLSTLDVSGDL-------- 531
            + C+ L      +  +K LEKL      NL  LP  I  + CL  L + G          
Sbjct: 734  RRCSKLSEFLEDVSELKCLEKLFLSGCSNLSVLPENIGSMPCLKELLLDGTAISNLPDSI 793

Query: 532  ---------------KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
                             +E P  V  +  L EL+L+ TA++ LP SI  L  L  L+  +
Sbjct: 794  FCLQKLEKLSLMGCRSIQELPTCVGKLTSLEELYLDDTALQNLPDSIGNLKNLQKLHFMH 853

Query: 577  CRSLEILPVTVSNLKCLRSLKLS-----------------------GCSKLKKFPEIVRS 613
            C SL  +P T++ LK L+ L L+                       GC  LK  P  +  
Sbjct: 854  CASLSKIPDTINELKSLKELFLNGSAVEELPLNPGSLPDLSDLSAGGCKFLKHVPSSIGG 913

Query: 614  MKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSG-- 671
            +  L +L LD T I+ +P  I  L  L  L L +CK+L  LP SI  +  L +L L G  
Sbjct: 914  LNYLLQLQLDRTPIETLPEEIGDLHFLHKLELRNCKSLKGLPESIKDMDQLHSLYLEGSN 973

Query: 672  ---------------------CFKLENVPETLGQIESLEEL---DISGTAVPHSTSWYSY 707
                                 C KL  +PE+ G ++SL  L   + S T +P S    S 
Sbjct: 974  IENLPEDFGKLEKLVLLRMNNCKKLRGLPESFGDLKSLHRLFMQETSVTKLPESFGNLSN 1033

Query: 708  IPINLMRKSVALK-----------LP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSL 755
            + +  M K    +           LP S S L SL +L+     +  G +P D+  L S+
Sbjct: 1034 LRVLKMLKKPFFRSSESEEPHFVELPNSFSNLSSLEELDARSWAI-SGKIPDDLEKLTSM 1092

Query: 756  KELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLD 815
            K L L  N F SLP+S+  LS L  + L DC+ L+ LP LP  + Q+ +  C SL ++ D
Sbjct: 1093 KILNLGNNYFHSLPSSLKGLSNLKKLSLYDCRELKCLPPLPWRLEQLILANCFSLESISD 1152

Query: 816  ALKLCKSDS-TMIACLDSLKLLGNKSLAFSMLREYLEAVSNT-----RQHLS-------- 861
               L   D   +  C   + +LG + L  ++ R Y+   ++T     ++ LS        
Sbjct: 1153 LSNLKFLDELNLTNCEKVVDILGLEHLT-ALKRLYMSGCNSTCSLAVKRRLSKASLKLLW 1211

Query: 862  -VVVPGSEIPEWF 873
             + +PG+ IP+WF
Sbjct: 1212 NLSLPGNRIPDWF 1224


>gi|357513247|ref|XP_003626912.1| Resistance protein [Medicago truncatula]
 gi|355520934|gb|AET01388.1| Resistance protein [Medicago truncatula]
          Length = 1925

 Score =  385 bits (988), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 226/584 (38%), Positives = 346/584 (59%), Gaps = 44/584 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           + +R +++   ++  SS V MIGI GMGG GKTT AR +Y+ I  +F    F++N+RE+ 
Sbjct: 196 LHTRVQQVIQFIEKQSSKVCMIGIWGMGGSGKTTTARDIYNKIHRKFVDHSFIENIREVY 255

Query: 61  SK--GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            K   G+  LQ QLLS +LK  +               R  RKK L+V+DDV  ++Q+++
Sbjct: 256 EKENRGITHLQEQLLSNVLKTIEK--------------RFMRKKTLIVLDDVSTLEQVEA 301

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L  N + FG+GS +I+TSRD  +LK   VD +Y    ++ +++L+LF   AF+   P  +
Sbjct: 302 LCINCKCFGAGSVLIVTSRDVRILKLLKVDRIYNIKEMDENKSLELFCWHAFREPSPKGD 361

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             +LS RI+ Y  GLPLALEV+GS+L  R++ EW S L +LE  P  ++ + L+IS+DGL
Sbjct: 362 FSELSRRIVVYCRGLPLALEVIGSYLRDRTIQEWISVLSKLERIPDDKVHEKLRISYDGL 421

Query: 239 Q-ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHD 296
           + + EK IFLDI CFF G DR YV+  ++GC F+  IGI VLIE+ L+ +  +N L MH 
Sbjct: 422 KNDTEKDIFLDICCFFIGKDRAYVSEIIDGCDFYAGIGITVLIERSLLKIEKSNKLGMHS 481

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTEST------GTELVEGIVLDNYHHE 350
           LL+++G++IV+++S +E GKRSRLW  ++   VLTE T        + VEG+VL     +
Sbjct: 482 LLRDMGREIVRKRSIKEPGKRSRLWFHKDAHKVLTEKTPRSAMVDIKTVEGLVL---MSQ 538

Query: 351 NEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK 410
           N   +C     F +M NLRLLK+ ++ L     +LS  LR L W+G+  +++P +  +  
Sbjct: 539 NTNDVCIETNTFKEMKNLRLLKLHHVDLTGAFGFLSKELRWLHWQGFTHEYIPDDFFLGN 598

Query: 411 TIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYE 470
            +   + +S I ++W   K +  LK++ LSHS+ L   PDF+  PNLEKLI++ C  L E
Sbjct: 599 LVVFELKHSNIKQVWNETKLMKNLKILNLSHSKYLTSTPDFSKLPNLEKLIMKDCPSLSE 658

Query: 471 IHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGD 530
           +H S+     L+++N+KDCTSL  LP K                 I+ LK L+TL +SG 
Sbjct: 659 VHQSIGGLRNLLLINLKDCTSLSNLPKK-----------------INQLKSLTTLIISGC 701

Query: 531 LKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL 574
            K  +  E +  ME L+ L ++ T ++ +P S+  L  +  ++L
Sbjct: 702 SKIDKLEEGIVQMESLTTLVIKDTGVKEVPYSVVRLKSIGYISL 745



 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 230/662 (34%), Positives = 364/662 (54%), Gaps = 77/662 (11%)

Query: 17   SDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK--GGLVSLQRQLLS 74
            S V M+GI GMGGLGKTT A+ VY+ I  +FE   F++N+RE+  K   G++ LQ+QLLS
Sbjct: 1304 SKVCMMGIWGMGGLGKTTTAKAVYNQIHRKFEDKSFIENIREVYEKYSTGIIHLQQQLLS 1363

Query: 75   QLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIII 134
             +L  +   I ++  G   +  RLQ K+ L+V+DDV  +K +               +I+
Sbjct: 1364 DILN-SKEIIHSIASGTSTIERRLQGKRALVVLDDVTTIKHV---------------LIV 1407

Query: 135  TSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLP 194
            T+RD  +LK   VD V+    +N  E+L+LF+  AF+   P+++  +LS  ++ Y     
Sbjct: 1408 TTRDVRILKLLEVDRVFTMKEMNERESLELFSWHAFRRPIPIKDFSELSRNVVLYE---- 1463

Query: 195  LALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE-LEKKIFLDIACFF 253
                        R+ +EW S L +LE  P  ++ + L+IS+DGL++ +EK IFLDI CFF
Sbjct: 1464 ------------RTKEEWESILSKLERIPNDQVQEKLRISYDGLKDGMEKDIFLDICCFF 1511

Query: 254  KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPE 312
             G DR YVT  L GCG H VIGI +LIE+ L+ +  NN + MHDL++++G++IV   S +
Sbjct: 1512 IGKDRAYVTEILNGCGLHAVIGIAILIERSLVKMEKNNKIGMHDLIRDMGREIVCESSTK 1571

Query: 313  ELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLK 372
            E GK SRLW  ++   +LT+++GTE VEG++L     E    +C SA +F +M NLRLL+
Sbjct: 1572 EPGKLSRLWFHQDAHDILTKNSGTETVEGLIL---RFERTSRVCFSADSFKEMKNLRLLQ 1628

Query: 373  ICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLD 432
            + N+ L     YLS  LR + W+    +++P +L +   + I + +S I ++W   K+L 
Sbjct: 1629 LDNVDLTGDYGYLSKELRWVHWQKSAFRYIPDDLYLGNLVVIDLKHSNIKQVWNETKYLK 1688

Query: 433  KLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSL 492
                            PDF+ +PNLEKLI++ C  L ++H S+   N+L ++N+KDC SL
Sbjct: 1689 T--------------TPDFSKSPNLEKLIMKNCPCLSKVHQSIGDLNRLHMINLKDCRSL 1734

Query: 493  ITLPGKIL-MKSLEKL------NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEH 545
              LP  I  +KSL+ L       +  L   I  ++ L+TL ++ D   +E P  +   + 
Sbjct: 1735 QNLPKNIYQLKSLKTLILSGCSKIDKLEEDIVQMESLTTL-IAKDTGVKEVPYSIVRSKS 1793

Query: 546  LSELHL---EGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
            +  + L   E   +   PLS  L S    +N++N  +L  L   V +L  LR++ L   S
Sbjct: 1794 IGYISLCGYEDFHVMFFPLSFGLGSS---INVQN-NNLGFLSTMVRSLSQLRAVWLQCRS 1849

Query: 603  KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
            K++   E+ R + D  ++     +  E+ SS       ++ NLS    L+R+ S  + +K
Sbjct: 1850 KIQLTRELRRILDDQCDV-----NFTELESS----HASQVSNLSSRSLLIRIGSCHVVIK 1900

Query: 663  SL 664
            +L
Sbjct: 1901 TL 1902



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 155/390 (39%), Gaps = 59/390 (15%)

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           + L  LH +G     +P     L  LV+  LK+    ++   T   +K L+ L LS    
Sbjct: 575 KELRWLHWQGFTHEYIPDDF-FLGNLVVFELKHSNIKQVWNET-KLMKNLKILNLSHSKY 632

Query: 604 LKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
           L   P+  + + +L +L + D  S+ EV  SI  L  L L+NL DC +L  LP  I  LK
Sbjct: 633 LTSTPDFSK-LPNLEKLIMKDCPSLSEVHQSIGGLRNLLLINLKDCTSLSNLPKKINQLK 691

Query: 663 SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
           SL TL +SGC K++ + E + Q+ESL  L I  T V         +P +++R    LK  
Sbjct: 692 SLTTLIISGCSKIDKLEEGIVQMESLTTLVIKDTGVKE-------VPYSVVR----LKSI 740

Query: 723 SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIE 782
               LC    L+       E    S I +  S     L  N+   L   +  L++L  + 
Sbjct: 741 GYISLCGYEGLS-------EDVFHSIIQSWMSPTMNNLPHNNLDFLKPIVKSLAQLRTVW 793

Query: 783 LEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKL-LGNKS- 840
           ++                      C S   L   LK+   D   I C +S  L + N S 
Sbjct: 794 IQ----------------------CHSKNQLTQELKIIFDDQYYINCTESEALQIPNTSS 831

Query: 841 ----LAFSMLREYLEAVSNT-RQHLSV------VVPGSEIPEWFMYQNEGSSITVTRPSN 889
               +     R  +  + N+  Q L++       +P    P   +Y +EG S     P +
Sbjct: 832 RSQLIGMGSCRTVVYTLGNSMSQGLTINDSGNFFLPSGNYPSCLVYTSEGPSTPFQVPKD 891

Query: 890 LYNKKKLVGYAICCVFHVLKNSRGNNCFGS 919
           +     + G  +C V+     +    C  S
Sbjct: 892 I--DCYMEGIVLCVVYSSTSENMAGECLTS 919



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 123/254 (48%), Gaps = 36/254 (14%)

Query: 522  LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
            L  +D++GD  +          + L  +H + +A R +P  +  L  LV+++LK+     
Sbjct: 1629 LDNVDLTGDYGYLS--------KELRWVHWQKSAFRYIPDDL-YLGNLVVIDLKH----- 1674

Query: 582  ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLTKL 640
                  SN+K +     +    LK  P+  +S  +L +L +     + +V  SI  L +L
Sbjct: 1675 ------SNIKQV----WNETKYLKTTPDFSKS-PNLEKLIMKNCPCLSKVHQSIGDLNRL 1723

Query: 641  ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL---DISGTA 697
             ++NL DC++L  LP +I  LKSLKTL LSGC K++ + E + Q+ESL  L   D     
Sbjct: 1724 HMINLKDCRSLQNLPKNIYQLKSLKTLILSGCSKIDKLEEDIVQMESLTTLIAKDTGVKE 1783

Query: 698  VPHS---TSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCS 754
            VP+S   +    YI +        +  P   GL S   +N+ + NL  G L + + +L  
Sbjct: 1784 VPYSIVRSKSIGYISLCGYEDFHVMFFPLSFGLGS--SINVQNNNL--GFLSTMVRSLSQ 1839

Query: 755  LKELYLSKNSFVSL 768
            L+ ++L   S + L
Sbjct: 1840 LRAVWLQCRSKIQL 1853


>gi|357449965|ref|XP_003595259.1| Disease resistance-like protein GS4-1 [Medicago truncatula]
 gi|355484307|gb|AES65510.1| Disease resistance-like protein GS4-1 [Medicago truncatula]
          Length = 1061

 Score =  385 bits (988), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 233/602 (38%), Positives = 360/602 (59%), Gaps = 25/602 (4%)

Query: 11  LMDSGSSD-VRMIGICGMGGLGKTTIARVVYD-LISHEFEASGFLDNVREISSKGGLVSL 68
           L+  GS +   ++GI G GG+GK+T+AR VY+  IS +F+   FL ++R  +   GLV L
Sbjct: 245 LLGFGSDERANIVGIYGTGGVGKSTLARAVYNNQISDQFDGVCFLADIRRSAINHGLVQL 304

Query: 69  QRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGS 128
           Q  LLS +L   D  + +V+ GI ++  RLQRKKVLLV+DDV   KQ+Q LAG  +WFGS
Sbjct: 305 QETLLSDILGEEDIRVRDVYRGISIIKRRLQRKKVLLVLDDVDKAKQIQVLAGGHDWFGS 364

Query: 129 GSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIR 188
           GS+IIIT+RD+HLL  +G+  VY+   LN++++L+LF+  AF   +       +S R + 
Sbjct: 365 GSKIIITTRDKHLLAINGILSVYEVKELNHEKSLELFSWHAFINRKIDPSYRSISNRAVS 424

Query: 189 YAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLD 248
           YA GLP+ALEV+GS L G+S+D W+S+L++ E     +I ++L++S+D L E +K IFLD
Sbjct: 425 YAHGLPIALEVIGSHLIGQSLDVWKSSLDKYEKVLHKDIHEVLKVSYDDLDEDDKGIFLD 484

Query: 249 IACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQ 307
           IACF+   +  Y    L   GF    GI+VL +K LI +  N  + MHDL+Q++G++IV+
Sbjct: 485 IACFYNSYEMSYAKEMLYLHGFSAENGIQVLTDKSLIKIDVNGCVRMHDLVQDMGREIVR 544

Query: 308 RQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTN 367
           ++S  E G+RSRLW ++++ HVL E+TGT+ +E I++ N  ++ EV+   S KAF KM N
Sbjct: 545 QESSVEPGRRSRLWFDDDIIHVLEENTGTDTIEVIII-NLCNDKEVHW--SGKAFKKMKN 601

Query: 368 LRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKG 427
           L++L I + +     + L N LR+L W GYP + LP +    K + + +  S +   +K 
Sbjct: 602 LKILIIRSARFSKDPQKLPNSLRVLDWSGYPSQSLPGDFNPKKLMILSLHESSLVS-FKS 660

Query: 428 IKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMK 487
           +K  + L  +     + L  +P  +G  NL  L L+ CT L  IH S+   NKL++L+ +
Sbjct: 661 LKVFESLSFLDFEGCKLLTELPSLSGLVNLGALCLDDCTNLITIHRSVGFLNKLMLLSTQ 720

Query: 488 DCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLS 547
            C  L  L   I + SLE                  +LD+ G  + + FPE++  ME++ 
Sbjct: 721 RCNQLKLLVPNINLPSLE------------------SLDMRGCSRLKSFPEVLGVMENIR 762

Query: 548 ELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKF 607
           +++L+ T+I  LP+SI  L GL  L L+ C+SL  LP ++  L  L  + +  C   + F
Sbjct: 763 DVYLDQTSIDKLPVSIGNLVGLERLFLRECKSLTQLPDSIRILPKLGIIMVYDCRGFQLF 822

Query: 608 PE 609
            +
Sbjct: 823 ED 824



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 107/191 (56%), Gaps = 6/191 (3%)

Query: 496 PGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-T 554
           P K+++ SL + +L S   ++   + LS LD  G     E P +   + +L  L L+  T
Sbjct: 642 PKKLMILSLHESSLVSF-KSLKVFESLSFLDFEGCKLLTELPSL-SGLVNLGALCLDDCT 699

Query: 555 AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
            +  +  S+  L+ L+LL+ + C  L++L   + NL  L SL + GCS+LK FPE++  M
Sbjct: 700 NLITIHRSVGFLNKLMLLSTQRCNQLKLLVPNI-NLPSLESLDMRGCSRLKSFPEVLGVM 758

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC-- 672
           +++ +++LD TSI ++P SI  L  LE L L +CK+L +LP SI  L  L  + +  C  
Sbjct: 759 ENIRDVYLDQTSIDKLPVSIGNLVGLERLFLRECKSLTQLPDSIRILPKLGIIMVYDCRG 818

Query: 673 FKLENVPETLG 683
           F+L    E +G
Sbjct: 819 FQLFEDREKVG 829



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 98/226 (43%), Gaps = 57/226 (25%)

Query: 576 NCRSLEILPVTVSNLKCLRSLKL---------SGCSKLKKFPEIVRSMKDLSELFLDG-T 625
           N + L IL +  S+L   +SLK+          GC  L + P +   + +L  L LD  T
Sbjct: 641 NPKKLMILSLHESSLVSFKSLKVFESLSFLDFEGCKLLTELPSL-SGLVNLGALCLDDCT 699

Query: 626 SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI 685
           ++  +  S+  L KL LL+   C N ++L    I L SL++L++ GC +L++ PE LG +
Sbjct: 700 NLITIHRSVGFLNKLMLLSTQRC-NQLKLLVPNINLPSLESLDMRGCSRLKSFPEVLGVM 758

Query: 686 ESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGAL 745
           E++ ++ +  T++                                              L
Sbjct: 759 ENIRDVYLDQTSI--------------------------------------------DKL 774

Query: 746 PSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELEDCKRLQ 790
           P  IGNL  L+ L+L +  S   LP SI  L KL  I + DC+  Q
Sbjct: 775 PVSIGNLVGLERLFLRECKSLTQLPDSIRILPKLGIIMVYDCRGFQ 820



 Score = 46.2 bits (108), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 24/190 (12%)

Query: 633 SIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD 692
           S+++   L  L+   CK L  LPS +  L +L  L L  C  L  +  ++G +  L  L 
Sbjct: 660 SLKVFESLSFLDFEGCKLLTELPS-LSGLVNLGALCLDDCTNLITIHRSVGFLNKLMLLS 718

Query: 693 ISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNL 752
                                   + L +P+++ L SL  L++  C+ ++ + P  +G +
Sbjct: 719 TQRC------------------NQLKLLVPNIN-LPSLESLDMRGCSRLK-SFPEVLGVM 758

Query: 753 CSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP---QLPPNIRQVRVNGCAS 809
            +++++YL + S   LP SI +L  L  + L +CK L  LP   ++ P +  + V  C  
Sbjct: 759 ENIRDVYLDQTSIDKLPVSIGNLVGLERLFLRECKSLTQLPDSIRILPKLGIIMVYDCRG 818

Query: 810 LVTLLDALKL 819
                D  K+
Sbjct: 819 FQLFEDREKV 828


>gi|297741885|emb|CBI33320.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score =  385 bits (988), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 243/633 (38%), Positives = 354/633 (55%), Gaps = 70/633 (11%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGI 91
           KTTIA+ +Y+  S +++   FL N+RE  SKG ++ LQ++LL  +L+  +  I NV +GI
Sbjct: 21  KTTIAKAIYNETSDQYDGRSFLRNIRE-RSKGDILQLQQELLHGILRGKNFKINNVDEGI 79

Query: 92  DMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVY 151
            M+   L   +VL++ DDV ++KQL+ LA  ++WF + S IIIT+RD+H+L  +G D  Y
Sbjct: 80  SMIKRCLTSNRVLVIFDDVDELKQLEYLAEEKDWFHAKSTIIITTRDKHVLAQYGADIPY 139

Query: 152 KPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDE 211
           +   LN +EA +LF++ AFK  +P +    LS  II YA GLPLAL+V+G+ L G+ +  
Sbjct: 140 EVSKLNKEEATELFSLWAFKQNRPQEVYKNLSYNIIDYANGLPLALKVIGASLFGKKISH 199

Query: 212 WRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFH 271
           W S L +L+I P  EI ++L+ISFDGL +++K +FLD+ACFFKG+D+D+V+  L   G H
Sbjct: 200 WESALCKLKIIPHKEIHNVLRISFDGLDDIDKGMFLDVACFFKGDDKDFVSRIL---GPH 256

Query: 272 PVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLT 331
               I  L ++CLIT+  N L MHDL+Q +G ++++++ PE+ G+RSRLW +    HVL 
Sbjct: 257 AEHVITTLADRCLITISKNMLDMHDLIQLMGWEVIRQECPEDPGRRSRLW-DSNAYHVLI 315

Query: 332 ESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQ--------LPNGLE 383
            +TGT  +EG+ LD     N   L  + K+F +M  LRLLKI N +        LP   E
Sbjct: 316 GNTGTRAIEGLFLDRCKF-NLSQL--TTKSFKEMNRLRLLKIHNPRRKLFLEDHLPRDFE 372

Query: 384 YLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSE 443
           + S  L  L W  YPL+ LP N      +E+ +  S I +LW+G       KV++L  S 
Sbjct: 373 FSSYELTYLHWDRYPLESLPLNFHAKNLVELLLRNSNIKQLWRGN------KVLLLLFSY 426

Query: 444 NLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKS 503
           N      F+  PNLE L LEGC                                      
Sbjct: 427 N------FSSVPNLEILTLEGC-------------------------------------- 442

Query: 504 LEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSI 563
              +NL+ LP  I   K L TL  +G  K   FPEI  +M  L  L L GTAI  LP SI
Sbjct: 443 ---VNLERLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRELRVLDLSGTAIMDLPSSI 499

Query: 564 ELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFL 622
             L+GL  L L+ C  L  +P+ + +L  L  L L  C+ ++   P  +  +  L +L L
Sbjct: 500 THLNGLQTLLLQECAKLHKIPIHICHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNL 559

Query: 623 DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           +      +P++I  L++LE+LNLS C NL ++P
Sbjct: 560 ERGHFSSIPTTINQLSRLEVLNLSHCSNLEQIP 592



 Score =  120 bits (300), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/208 (37%), Positives = 118/208 (56%), Gaps = 16/208 (7%)

Query: 615 KDLSELFLDGTSIKEVPSSIELL-----------TKLELLNLSDCKNLVRLPSSIIALKS 663
           K+L EL L  ++IK++    ++L             LE+L L  C NL RLP  I   K 
Sbjct: 398 KNLVELLLRNSNIKQLWRGNKVLLLLFSYNFSSVPNLEILTLEGCVNLERLPRGIYKWKH 457

Query: 664 LKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYIPINLMRKSVAL- 719
           L+TL+ +GC KLE  PE  G +  L  LD+SGTA+   P S +  + +   L+++   L 
Sbjct: 458 LQTLSCNGCSKLERFPEIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECAKLH 517

Query: 720 KLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
           K+P  +  L SL  L+L  CN+MEG +PSDI +L SL++L L +  F S+PT+I  LS+L
Sbjct: 518 KIPIHICHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRL 577

Query: 779 LNIELEDCKRLQSLPQLPPNIRQVRVNG 806
             + L  C  L+ +P+LP  +R +  +G
Sbjct: 578 EVLNLSHCSNLEQIPELPSRLRLLDAHG 605



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 114/220 (51%), Gaps = 33/220 (15%)

Query: 542 HMEHLSELHLEGTAI----RGLPLSIELLS-------GLVLLNLKNCRSLEILPVTVSNL 590
           H ++L EL L  + I    RG  + + L S        L +L L+ C +LE LP  +   
Sbjct: 396 HAKNLVELLLRNSNIKQLWRGNKVLLLLFSYNFSSVPNLEILTLEGCVNLERLPRGIYKW 455

Query: 591 KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKN 650
           K L++L  +GCSKL++FPEI  +M++L  L L GT+I ++PSSI  L  L+ L L +C  
Sbjct: 456 KHLQTLSCNGCSKLERFPEIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECAK 515

Query: 651 LVRLPSSIIALKSLKTLNLSGCFKLE-NVPETLGQIESLEELDISGTAVPHSTSWYSYIP 709
           L ++P  I  L SL+ L+L  C  +E  +P  +  + SL++L++           +S IP
Sbjct: 516 LHKIPIHICHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNL-------ERGHFSSIP 568

Query: 710 INLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEG--ALPS 747
                        +++ L  L  LNL+ C+ +E    LPS
Sbjct: 569 T------------TINQLSRLEVLNLSHCSNLEQIPELPS 596


>gi|238478649|ref|NP_001154372.1| transmembrane receptors / ATP binding protein [Arabidopsis thaliana]
 gi|332192669|gb|AEE30790.1| transmembrane receptors / ATP binding protein [Arabidopsis thaliana]
          Length = 1384

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 272/877 (31%), Positives = 451/877 (51%), Gaps = 133/877 (15%)

Query: 1    MDSRCEKLRFLMDS-GSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            ++S  + L  L+D+  SS V+++G+ GMGG+GKTT+A+  Y+ I   FE   F+ ++RE 
Sbjct: 192  LESPLKDLTGLIDTESSSGVQVLGLYGMGGIGKTTLAKAFYNKIVGNFEQRAFISDIRER 251

Query: 60   SS-KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            SS + GLV+LQ+ L+ +L +L    I +V  G++ + + +  KK+++V+DDV  + Q+ +
Sbjct: 252  SSAENGLVTLQKTLIKELFRLVP-EIEDVSIGLEKIKANVHEKKIIVVLDDVDHIDQVHA 310

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            L G   W+G G+ I+IT+RD  +L    V++ Y+   L   +AL+LF+  + +  +P + 
Sbjct: 311  LVGETRWYGQGTLIVITTRDSEILSKLSVNQQYEVKCLTEPQALKLFSYHSLRKEEPTKN 370

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVD-EWRSTLERLEIEPPSEILDILQISFDG 237
             + LS +I++ +G LPLA+EV GS L  +  + +W++ L++L+   P  + D+L++SF  
Sbjct: 371  LLALSKKIVQISGLLPLAVEVFGSLLYDKKEEKDWQTQLDKLKKTQPGNLQDVLELSFKS 430

Query: 238  LQELEKKIFLDIACFFKGND--RDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWM 294
            L + EKK+FLDIAC F   +  +D V   L+GCG +    + VL +K L+ +  N+TLWM
Sbjct: 431  LDDEEKKVFLDIACLFLKMEIKKDEVVIVLKGCGLNAEAALSVLRQKSLVKILANDTLWM 490

Query: 295  HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD--------- 345
            HD ++++G+Q+V ++S E+ G RSRLW   E+  VL    GT  + GIVLD         
Sbjct: 491  HDQIRDMGRQMVLKESREDPGLRSRLWDRGEIMTVLNNMKGTSSIRGIVLDFKKKFARDP 550

Query: 346  --------------------NYHHENEVYLCASAK-----------AFSKMTNLRLLKIC 374
                                NY     V   A  K           +F+ MT LRLL+I 
Sbjct: 551  TADEIVSRNLRNNPGIYSVFNYLKNKLVRFPAEEKPKSSEITIPVESFAPMTKLRLLQIN 610

Query: 375  NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHL--D 432
            N++L   L+ L + L+ + W+G PL+ LP +    +   + +  S I ++      +  +
Sbjct: 611  NVELEGNLKLLPSELKWIQWKGCPLENLPPDFLARQLSVLDLSESGIRQVQTLRNKMVDE 670

Query: 433  KLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSL 492
             LKV+IL    +L  +PD +    LEKL+ E CT L ++  S+    KLI L+ + C+  
Sbjct: 671  NLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSK- 729

Query: 493  ITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLE 552
                            L      +SGLK L  L +SG       PE +  M  L EL L+
Sbjct: 730  ----------------LSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLD 773

Query: 553  GTAIRGLPLSIELLSGLVLLNLKNCR----------------------SLEILPVTVSNL 590
            GTAI+ LP SI  L  L +L+L+ C+                      +L+ LP ++ +L
Sbjct: 774  GTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGDL 833

Query: 591  KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKN 650
            K L+ L L  C+ L K P+ +  +K L +LF++G++++E+P     L  L   +  DCK 
Sbjct: 834  KNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKF 893

Query: 651  LVRLPSS-----------------------IIALKSLKTLNLSGCFKLENVPETLGQIES 687
            L ++PSS                       I AL  ++ L L  C  L+ +P+++G +++
Sbjct: 894  LKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDT 953

Query: 688  LEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSG-LCSLRKLNLTDCNLMEGALP 746
            L  L++ G+ +                     +LP   G L  L +L +++C +++  LP
Sbjct: 954  LYSLNLEGSNIE--------------------ELPEEFGKLEKLVELRMSNCKMLK-RLP 992

Query: 747  SDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIEL 783
               G+L SL  LY+ +     LP S  +LS L+ +E+
Sbjct: 993  ESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 1029



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 172/643 (26%), Positives = 291/643 (45%), Gaps = 92/643 (14%)

Query: 419  SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGA-PNLEKLILEGCTRLYEIHPSLLL 477
            S++ E    +  L  L+ + LS   +L  +P+  GA  +L++L+L+G T +  +  S+  
Sbjct: 728  SKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDG-TAIKNLPESINR 786

Query: 478  HNKLIILNMKDCTSLITLPGKI-LMKSLEKL-----NLKSLPTTISGLKCLSTLDVSGDL 531
               L IL+++ C  +  LP  I  +KSLEKL      LK+LP++I  LK L  L +    
Sbjct: 787  LQNLEILSLRGC-KIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT 845

Query: 532  KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL----------- 580
               + P+ +  ++ L +L + G+A+  LPL    L  L   +  +C+ L           
Sbjct: 846  SLSKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLN 905

Query: 581  ------------EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIK 628
                        E LP  +  L  +R L+L  C  LK  P+ +  M  L  L L+G++I+
Sbjct: 906  SLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIE 965

Query: 629  EVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
            E+P     L KL  L +S+CK L RLP S   LKSL  L +     +  +PE+ G + +L
Sbjct: 966  ELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETL-VSELPESFGNLSNL 1024

Query: 689  EELD--------ISGTAVPHSTSWYSYIPI-NLMRKSVALKLPSLSGLCSLRKLNLTDCN 739
              L+        IS + VP ++    ++ + N   K   LKL  L   CS R        
Sbjct: 1025 MVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFSK--LLKLEELDA-CSWR-------- 1073

Query: 740  LMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
             + G +P D+  L  L +L L  N F SLP+S+  LS L  + L DC+ L+ LP LP  +
Sbjct: 1074 -ISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKL 1132

Query: 800  RQVRVNGCASLVTLLDALKLCK-SDSTMIACLDSLKLLG---------------NKSLAF 843
             Q+ +  C SL ++ D  +L   +D  +  C   + + G               N + + 
Sbjct: 1133 EQLNLANCFSLESVSDLSELTILTDLNLTNCAKVVDIPGLEHLTALKRLYMTGCNSNYSL 1192

Query: 844  SMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICC 903
            ++ +   +A     ++LS  +PG+ +P+WF   ++G      +P+     ++L G  I  
Sbjct: 1193 AVKKRLSKASLKMMRNLS--LPGNRVPDWF---SQGPVTFSAQPN-----RELRGVIIAV 1242

Query: 904  VFHVLKNSRGNNCFGSYPTHQLNCHI----GHGIYGIGFRDKFGQAGSDHLWLLYLSRQT 959
            V   L +   ++ +      ++   I     H            +  +D    L++ R +
Sbjct: 1243 VV-ALNDETEDDDYQLPDVMEVQAQIHKLDHHKCTNTLHLSGVPRTNNDQ---LHICRYS 1298

Query: 960  CYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVY 1002
             +    PL + L+   +  V +   P + QG+E+KM G+H VY
Sbjct: 1299 AFH---PLVTMLKDGYTIQV-IKRNPPIKQGVELKMHGIHLVY 1337



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 148/322 (45%), Gaps = 43/322 (13%)

Query: 399  LKFLPSNL-QMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPN 456
            LKFLP ++  MD    + +  S I EL +    L+KL  + +S+ + L R+P+ F    +
Sbjct: 941  LKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLKS 1000

Query: 457  LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
            L +L ++  T + E+  S    + L++L M     L  +    +  + E+     +P + 
Sbjct: 1001 LHRLYMKE-TLVSELPESFGNLSNLMVLEMLK-KPLFRISESNVPGTSEEPRFVEVPNSF 1058

Query: 517  SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
            S L  L  LD        + P+ +E +  L +L+L       LP S+  LS L  L+L++
Sbjct: 1059 SKLLKLEELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRD 1118

Query: 577  CRSLEILPVTVSNLKC-LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIE 635
            CR L+ LP     L C L  L L+ C  L+       S+ DLSE                
Sbjct: 1119 CRELKRLP----PLPCKLEQLNLANCFSLE-------SVSDLSE---------------- 1151

Query: 636  LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC---FKLENVPETLGQ--IESLEE 690
             LT L  LNL++C  +V +P  +  L +LK L ++GC   + L  V + L +  ++ +  
Sbjct: 1152 -LTILTDLNLTNCAKVVDIP-GLEHLTALKRLYMTGCNSNYSLA-VKKRLSKASLKMMRN 1208

Query: 691  LDISGTAVPHSTSWYSYIPINL 712
            L + G  VP    W+S  P+  
Sbjct: 1209 LSLPGNRVP---DWFSQGPVTF 1227


>gi|82542043|gb|ABB82029.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1147

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 263/712 (36%), Positives = 404/712 (56%), Gaps = 49/712 (6%)

Query: 11  LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK-GGLVSLQ 69
            + + + DV ++GI GM G+GKTTIARVV++ + + FE S FL N+ E S +  GLV LQ
Sbjct: 205 FLSTATDDVLIVGIHGMPGIGKTTIARVVFNQLCYGFEESCFLSNINETSKQFNGLVPLQ 264

Query: 70  RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG 129
           +QLL  + K    +I  V  G  ++  RL R++VL+V DDV    QL +L G R WFG G
Sbjct: 265 KQLLHDIFKQDAANINCVDRGKVLIKERLCRQRVLVVADDVARQDQLNALMGERSWFGPG 324

Query: 130 SRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRY 189
           SR+IIT+RD  +L     D+ Y+   L  DE+LQLF+  A +  +P ++ ++LS  ++ Y
Sbjct: 325 SRVIITTRDSSVLLK--ADQTYQIEELKPDESLQLFSWHALRDTEPAEDYIELSKDVVDY 382

Query: 190 AGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELE-KKIFLD 248
            GGLPLALEV+G+ LSG++ D W+S +++L   P  +I   L+IS+D L   E +  FLD
Sbjct: 383 CGGLPLALEVMGACLSGKNRDGWKSVIDKLRRIPNHDIQGKLKISYDSLDGEELQNAFLD 442

Query: 249 IACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQELGQQIV 306
           IACFF    ++YV   L   CG++P + +  L  + LI V+    + MHDLL+++G+++V
Sbjct: 443 IACFFIDRKKEYVAKVLGARCGYNPEVDLETLRGRSLIKVNAIGKITMHDLLRDMGREVV 502

Query: 307 QRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMT 366
           +  SP+E GKR+R+W +E+  +VL +  GT++VEG+ LD    E +     S  +F+KM 
Sbjct: 503 RETSPKEPGKRTRIWNQEDAWNVLEQQKGTDVVEGLALDVKASEAK---SLSTGSFAKMK 559

Query: 367 NLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWK 426
            L LL+I  + L    + LS  L L+ W   PLK+ PS+   D    + M YS + +LWK
Sbjct: 560 RLNLLQINGVHLTGSFKLLSRELMLICWLQCPLKYFPSDFTFDNLDVLDMQYSNLKKLWK 619

Query: 427 GIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNM 486
           G K L++LK++ LSHS+NLI+ P+   + +L+KL L+GC+ L E+H S+     LI LN+
Sbjct: 620 GKKILNRLKIINLSHSQNLIKTPNLHSS-SLKKLKLKGCSSLVEVHQSIGNLTSLIFLNL 678

Query: 487 KDCTSLITLPGKIL-MKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
           + C  L  LP  I+ +KSL++LN      L+ LP  +  ++ L  L   G ++ ++F   
Sbjct: 679 EGCWRLKILPESIVNVKSLKRLNISGCSQLEKLPERMGDMESLIELLADG-IENKQFLSS 737

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL------------EILPVTV 587
           +  ++++  L L     RG   S +  S L   +     S+             +LP T 
Sbjct: 738 IGQLKYVRRLSL-----RGYNFSQDSPSWLSPSSTSWPPSISSFISASVLCLKRLLPTTF 792

Query: 588 SNLKCLRSLKLSGCSKLKKFPEIV--RSMKDLSELFLDGTSIKEVPSSIELLTKLELLNL 645
            + + ++SL+LS      +    V  R    L EL L G     +PS I  L KLE++++
Sbjct: 793 IDWRSVKSLELSYVGLSDRVTNCVDFRGFSSLEELDLSGNKFSSLPSGIGFLAKLEMMDV 852

Query: 646 SDCKNLVR---LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
            +CK LV    LPS+++ L +       GC  LE V      IES +EL I+
Sbjct: 853 QECKYLVSIRDLPSNLVYLFA------GGCKSLERVRIP---IESKKELYIN 895



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 152/340 (44%), Gaps = 57/340 (16%)

Query: 625 TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQ 684
           +S+ EV  SI  LT L  LNL  C  L  LP SI+ +KSLK LN+SGC +LE +PE +G 
Sbjct: 658 SSLVEVHQSIGNLTSLIFLNLEGCWRLKILPESIVNVKSLKRLNISGCSQLEKLPERMGD 717

Query: 685 IESLEEL---DISGTAVPHSTSWYSYIP-INLMRKSVALKLPSL---------------- 724
           +ESL EL    I       S     Y+  ++L   + +   PS                 
Sbjct: 718 MESLIELLADGIENKQFLSSIGQLKYVRRLSLRGYNFSQDSPSWLSPSSTSWPPSISSFI 777

Query: 725 --SGLC-------------SLRKLNLTDCNLMEGALPS-DIGNLCSLKELYLSKNSFVSL 768
             S LC             S++ L L+   L +      D     SL+EL LS N F SL
Sbjct: 778 SASVLCLKRLLPTTFIDWRSVKSLELSYVGLSDRVTNCVDFRGFSSLEELDLSGNKFSSL 837

Query: 769 PTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIA 828
           P+ I  L+KL  +++++CK L S+  LP N+  +   GC SL  +   ++  K     + 
Sbjct: 838 PSGIGFLAKLEMMDVQECKYLVSIRDLPSNLVYLFAGGCKSLERVRIPIESKKELYINLH 897

Query: 829 CLDSLK----LLGNKSLAFSML------------REYLEAVSN-TRQHLSVVVPGSEIPE 871
              SL+    + G  ++ +++L            +  +EA  N   ++    +PG ++P 
Sbjct: 898 ESHSLEEIQGIEGQSNIFWNILVDDCIPSPNKLQKSVVEAFCNGCYRYFIYCLPG-KMPN 956

Query: 872 WFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS 911
           W  Y  EG  ++   P      + LV + +C +  V ++S
Sbjct: 957 WMSYSGEGCPLSFHIPPVF---QGLVVWFVCSLEKVHRHS 993


>gi|227438251|gb|ACP30615.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1147

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 294/920 (31%), Positives = 480/920 (52%), Gaps = 111/920 (12%)

Query: 1    MDSRCEKLRFLMDSGSS-DVRMIGICGMGGLGKTTIARVVYDLISHEF-EASGFLDNVRE 58
            ++SR + L  L++  SS DV+++G+ GMGG+GKTT+A+ +Y  +   F E   F+ NVRE
Sbjct: 190  LESRVDDLMNLVNVKSSCDVQILGLYGMGGIGKTTLAKALYKKMVEYFKEQRVFISNVRE 249

Query: 59   ISS-KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
             SS K GL++L++ L+++L   +   I +V  G D +   +  KK+L+V+DDV +V Q+ 
Sbjct: 250  RSSGKDGLLNLEKTLITELFD-SPPEIEDVDQGRDKIRESVHEKKILVVLDDVDNVDQVN 308

Query: 118  SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
            +L G R W+G GS I+IT+RDE +L +  V   Y+ + L+ ++A++LF+  + +  +P  
Sbjct: 309  ALVGERSWYGEGSLIVITTRDEDILNSLSVSLKYEVNCLSEEQAVKLFSYHSLRKEKPTG 368

Query: 178  ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
              ++LS  I++  G LPLA+EV GS    +   EW+  +++LE   P+ + D+L++SFD 
Sbjct: 369  SLLKLSENIVKITGLLPLAVEVFGSLFYDKKEKEWQVQVKKLENTKPNGLRDVLKVSFDS 428

Query: 238  LQELEKKIFLDIACFFKGND--RDYVTNFLEGCGFHPVIGIRVLIEKCLIT-VHNNTLWM 294
            L + EKK+FLDIAC F   D  ++ + + L+GCGF+    ++ L +K L+  + +NTLWM
Sbjct: 429  LDDEEKKVFLDIACLFLKMDMTKEEIVDVLKGCGFNAEAVLKALRQKSLVKFLADNTLWM 488

Query: 295  HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD--------- 345
            HD ++++G Q+V ++SPE+ GKRSRLW   E   ++    GT  + GIVLD         
Sbjct: 489  HDQIKDMGMQMVVKESPEDPGKRSRLWDRGE---IMNNMKGTTSIRGIVLDFKKKSMRLD 545

Query: 346  -------------NYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLL 392
                         N             + F  M  LRLL+I +++L   LE L + L+ +
Sbjct: 546  DNPGTSSVCSYLKNILKPTRTENTIPVEHFVPMKKLRLLQINHVELQGNLELLPSDLKWI 605

Query: 393  GWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWK------GIKHLDKLKVMILSHSENLI 446
             WRG PLK +P++    +   + +  S I           G++    L+V+ L   ++L 
Sbjct: 606  QWRGCPLKDVPASFLSRQLAVLDLSESGIRGFQSSQLKIVGLQVEGNLRVVNLRGCDSLE 665

Query: 447  RMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKIL-MKSLE 505
             +PD +   +LEKL+ EGC  L E+  S+     L+ L++++C +L      +  +KSLE
Sbjct: 666  AIPDLSNHKSLEKLVFEGCKLLVEVPSSVGNLRSLLHLDLRNCPNLTEFLVDVSGLKSLE 725

Query: 506  KLNL-----------------------------KSLPTTISGLKCLSTLDVSGDLKFREF 536
            KL L                             K+LP +I  L+ L  L +       E 
Sbjct: 726  KLYLSGCSSLSVLPENIGYMLCLKELLLDETAIKNLPGSIFRLEKLQKLSLKSCRSIHEL 785

Query: 537  PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
            PE +  +  L EL L  T+++ LP SI  L  L  L++ +C SL  +P T++ L  L+ L
Sbjct: 786  PECIGTLTSLEELDLSSTSLQSLPSSIGNLKNLQKLHVMHCASLSKIPDTINKLASLQEL 845

Query: 597  KLSGCS-----------KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIE--LLTKLELL 643
             + G +            L K P+ +  +  L EL +DG++++E+P S++   L  L   
Sbjct: 846  IIDGSAVEELPLSLKPGSLSKIPDTINKLASLQELIIDGSAVEELPLSLKPGSLPCLAKF 905

Query: 644  NLSDCKNLVRLPSSIIALKSL-----------------------KTLNLSGCFKLENVPE 680
            +   CK+L ++PSS+  L SL                       + + L  C  L+++P 
Sbjct: 906  SAGGCKSLKQVPSSVGWLNSLLQLKLDSTPITTLPEEISQLRFIQKVELRNCLSLKSLPN 965

Query: 681  TLGQIESLEELDISGTAV---PHSTSWYSYIPINLMRKSVAL-KLP-SLSGLCSLRKLNL 735
             +G +++L  L + G+ +   P +      + +  M K   L KLP S  GL SL  L +
Sbjct: 966  KIGDMDTLHSLYLEGSNIEELPENFGNLENLVLLQMNKCKNLKKLPNSFGGLKSLCHLYM 1025

Query: 736  TDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQL 795
             +  +ME  LP   GNL +L+ L L  N F SLP+S+  LS L  + L DC+ L  LP L
Sbjct: 1026 EETLVME--LPGSFGNLSNLRVLNLGNNKFHSLPSSLKGLSSLKELSLCDCQELTCLPSL 1083

Query: 796  PPNIRQVRVNGCASLVTLLD 815
            P N+ ++ +  C SL ++ D
Sbjct: 1084 PCNLEKLNLANCCSLESISD 1103



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 164/358 (45%), Gaps = 60/358 (16%)

Query: 419  SRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPNLEKLILEGCTRLYEIHPSLLL 477
            S IG L    K+L KL VM   H  +L ++PD      +L++LI++G + + E+  SL  
Sbjct: 810  SSIGNL----KNLQKLHVM---HCASLSKIPDTINKLASLQELIIDG-SAVEELPLSL-- 859

Query: 478  HNKLIILNMKDCTSLITLPGKI-LMKSLEKL-----NLKSLPTTI--SGLKCLSTLDVSG 529
                         SL  +P  I  + SL++L      ++ LP ++    L CL+     G
Sbjct: 860  ----------KPGSLSKIPDTINKLASLQELIIDGSAVEELPLSLKPGSLPCLAKFSAGG 909

Query: 530  DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSN 589
                ++ P  V  +  L +L L+ T I  LP  I  L  +  + L+NC SL+ LP  + +
Sbjct: 910  CKSLKQVPSSVGWLNSLLQLKLDSTPITTLPEEISQLRFIQKVELRNCLSLKSLPNKIGD 969

Query: 590  LKCLRSLKLSG-----------------------CSKLKKFPEIVRSMKDLSELFLDGTS 626
            +  L SL L G                       C  LKK P     +K L  L+++ T 
Sbjct: 970  MDTLHSLYLEGSNIEELPENFGNLENLVLLQMNKCKNLKKLPNSFGGLKSLCHLYMEETL 1029

Query: 627  IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIE 686
            + E+P S   L+ L +LNL + K    LPSS+  L SLK L+L  C +L  +P       
Sbjct: 1030 VMELPGSFGNLSNLRVLNLGNNK-FHSLPSSLKGLSSLKELSLCDCQELTCLPSLPC--- 1085

Query: 687  SLEELDISGTAVPHSTSWYSYIP----INLMRKSVALKLPSLSGLCSLRKLNLTDCNL 740
            +LE+L+++      S S  S +     +NL    +   +P L  L +L++L+++ CN 
Sbjct: 1086 NLEKLNLANCCSLESISDLSELTMLHELNLTNCGIVDDIPGLEHLTALKRLDMSGCNF 1143


>gi|356577841|ref|XP_003557030.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like,
           partial [Glycine max]
          Length = 1034

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 232/568 (40%), Positives = 344/568 (60%), Gaps = 32/568 (5%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++SR  KL   +D  S    +IGI GMGGLGKTTIA+ +Y+    EF    F  +  E +
Sbjct: 191 LESRVPKLIKFVDDQSGRGCVIGIWGMGGLGKTTIAKSIYN----EFRRQRFRRSFIETN 246

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +KG    LQ +LLS +LK     I +V  GI M+  +L  ++ L+++DDV + +QL++L 
Sbjct: 247 NKGH-TDLQEKLLSDVLK-TKVKIHSVAMGISMIEKKLFAERALIILDDVTEFEQLKALC 304

Query: 121 GNREWFGSGSRIIITSRDEHLL---KTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
           GN +W    S +IIT+RD  LL   K H    ++K   ++ +E+L+LF+  AF+   P +
Sbjct: 305 GNCKWIDRESVLIITTRDLRLLEELKDHHAVHIWKIMEMDENESLELFSKHAFREASPTE 364

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
              +LS  ++ Y  GLPLALE+LGS+L  R+ +EW S L +L+  P  ++ + L+ISFDG
Sbjct: 365 NWNKLSIDVVAYCAGLPLALEILGSYLRWRTKEEWESVLSKLKKIPNYKVQEKLRISFDG 424

Query: 238 LQE-LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
           L++ +EK IFLD+ CFF G DR YVT  L+GCG H  IGI+VLIE  LI V  N L MH 
Sbjct: 425 LRDPMEKDIFLDVCCFFIGKDRTYVTEILDGCGLHASIGIKVLIEHSLIKVEKNKLGMHP 484

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL+++G++IV   S  E GKR+RLW +++V  VLT +TGTE ++G+ +  +    + +  
Sbjct: 485 LLRDMGREIVCESSKNEPGKRNRLWFQKDVLDVLTNNTGTETIQGLAVKLHFTSRDSF-- 542

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
             A +F KM  LRLL++ ++QL     YLS +L+ + WRG+PLK++P+N  ++  I I  
Sbjct: 543 -EAYSFEKMKGLRLLQLDHVQLSGNYGYLSKQLKWICWRGFPLKYIPNNFHLEGVIAIDF 601

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL- 475
            YS++  LWK  + L  LK + LSHS+NL   PDF+   +LEKLIL  C  L ++H S+ 
Sbjct: 602 KYSKLRLLWKTPQVLPWLKFLNLSHSKNLTETPDFSKLTSLEKLILRNCPSLCKVHQSIG 661

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
            LHN LI++N+K CTS                 L++LP  +  LK +  L +SG  K  +
Sbjct: 662 DLHN-LILINLKGCTS-----------------LRNLPREVYKLKSVKILILSGCSKIDK 703

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSI 563
             E +  ME L+ L  + TA++ +P SI
Sbjct: 704 LEEDIVQMESLTTLIADNTAVKQVPFSI 731



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 157/377 (41%), Gaps = 42/377 (11%)

Query: 550 HLEGTAIRGLPLSI----ELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
            L+    RG PL        L G++ ++ K  + L +L  T   L  L+ L LS    L 
Sbjct: 573 QLKWICWRGFPLKYIPNNFHLEGVIAIDFKYSK-LRLLWKTPQVLPWLKFLNLSHSKNLT 631

Query: 606 KFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSL 664
           + P+  + +  L +L L +  S+ +V  SI  L  L L+NL  C +L  LP  +  LKS+
Sbjct: 632 ETPDFSK-LTSLEKLILRNCPSLCKVHQSIGDLHNLILINLKGCTSLRNLPREVYKLKSV 690

Query: 665 KTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSL 724
           K L LSGC K++ + E + Q+ESL  L    TAV         +P +++  S ++   SL
Sbjct: 691 KILILSGCSKIDKLEEDIVQMESLTTLIADNTAVKQ-------VPFSIV-SSKSIGYISL 742

Query: 725 SGLCSLRKLNLTDCNLMEGALP-----SDIGNL----CSLKELYLSKNSFVSLPTSITHL 775
            G   L + N+    +     P     S IG+      SL  + +  N+F  L  +   L
Sbjct: 743 CGFEGLSR-NVFPSIIWSWMSPTMNPLSYIGHFYGTSSSLVSMDIHNNNFGDLAPTFRSL 801

Query: 776 SKLLNIELEDCKRLQSLPQLPPNIRQVRVNGC-------ASLVTLLDALKLCKSDSTMIA 828
           S L ++ L  C     L +L   I    +NG           ++      L +S S +I 
Sbjct: 802 SNLRSV-LVQCDTQIELSKLCRTILD-DINGSDFTELRMTPYISQFSKHSL-RSYSYLIG 858

Query: 829 CLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPS 888
                   G     F+ L   +     T     V +P    P W  + +EG S+  T P 
Sbjct: 859 IGTG---TGTYQEVFTTLNNSISKELATNVACDVSLPADNYPFWLAHTSEGHSVYFTVPE 915

Query: 889 NLYNKKKLVGYAICCVF 905
           +     +L G  +C V+
Sbjct: 916 DC----RLKGMILCVVY 928


>gi|186478922|ref|NP_174037.3| transmembrane receptors / ATP binding protein [Arabidopsis thaliana]
 gi|332192668|gb|AEE30789.1| transmembrane receptors / ATP binding protein [Arabidopsis thaliana]
          Length = 1384

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 272/877 (31%), Positives = 451/877 (51%), Gaps = 133/877 (15%)

Query: 1    MDSRCEKLRFLMDS-GSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            ++S  + L  L+D+  SS V+++G+ GMGG+GKTT+A+  Y+ I   FE   F+ ++RE 
Sbjct: 192  LESPLKDLTGLIDTESSSGVQVLGLYGMGGIGKTTLAKAFYNKIVGNFEQRAFISDIRER 251

Query: 60   SS-KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            SS + GLV+LQ+ L+ +L +L    I +V  G++ + + +  KK+++V+DDV  + Q+ +
Sbjct: 252  SSAENGLVTLQKTLIKELFRLVP-EIEDVSIGLEKIKANVHEKKIIVVLDDVDHIDQVHA 310

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            L G   W+G G+ I+IT+RD  +L    V++ Y+   L   +AL+LF+  + +  +P + 
Sbjct: 311  LVGETRWYGQGTLIVITTRDSEILSKLSVNQQYEVKCLTEPQALKLFSYHSLRKEEPTKN 370

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVD-EWRSTLERLEIEPPSEILDILQISFDG 237
             + LS +I++ +G LPLA+EV GS L  +  + +W++ L++L+   P  + D+L++SF  
Sbjct: 371  LLALSKKIVQISGLLPLAVEVFGSLLYDKKEEKDWQTQLDKLKKTQPGNLQDVLELSFKS 430

Query: 238  LQELEKKIFLDIACFFKGND--RDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWM 294
            L + EKK+FLDIAC F   +  +D V   L+GCG +    + VL +K L+ +  N+TLWM
Sbjct: 431  LDDEEKKVFLDIACLFLKMEIKKDEVVIVLKGCGLNAEAALSVLRQKSLVKILANDTLWM 490

Query: 295  HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD--------- 345
            HD ++++G+Q+V ++S E+ G RSRLW   E+  VL    GT  + GIVLD         
Sbjct: 491  HDQIRDMGRQMVLKESREDPGLRSRLWDRGEIMTVLNNMKGTSSIRGIVLDFKKKFARDP 550

Query: 346  --------------------NYHHENEVYLCASAK-----------AFSKMTNLRLLKIC 374
                                NY     V   A  K           +F+ MT LRLL+I 
Sbjct: 551  TADEIVSRNLRNNPGIYSVFNYLKNKLVRFPAEEKPKSSEITIPVESFAPMTKLRLLQIN 610

Query: 375  NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHL--D 432
            N++L   L+ L + L+ + W+G PL+ LP +    +   + +  S I ++      +  +
Sbjct: 611  NVELEGNLKLLPSELKWIQWKGCPLENLPPDFLARQLSVLDLSESGIRQVQTLRNKMVDE 670

Query: 433  KLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSL 492
             LKV+IL    +L  +PD +    LEKL+ E CT L ++  S+    KLI L+ + C+  
Sbjct: 671  NLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCS-- 728

Query: 493  ITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLE 552
                            L      +SGLK L  L +SG       PE +  M  L EL L+
Sbjct: 729  ---------------KLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLD 773

Query: 553  GTAIRGLPLSIELLSGLVLLNLKNCR----------------------SLEILPVTVSNL 590
            GTAI+ LP SI  L  L +L+L+ C+                      +L+ LP ++ +L
Sbjct: 774  GTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGDL 833

Query: 591  KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKN 650
            K L+ L L  C+ L K P+ +  +K L +LF++G++++E+P     L  L   +  DCK 
Sbjct: 834  KNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKF 893

Query: 651  LVRLPSS-----------------------IIALKSLKTLNLSGCFKLENVPETLGQIES 687
            L ++PSS                       I AL  ++ L L  C  L+ +P+++G +++
Sbjct: 894  LKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDT 953

Query: 688  LEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSG-LCSLRKLNLTDCNLMEGALP 746
            L  L++ G+ +                     +LP   G L  L +L +++C +++  LP
Sbjct: 954  LYSLNLEGSNIE--------------------ELPEEFGKLEKLVELRMSNCKMLK-RLP 992

Query: 747  SDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIEL 783
               G+L SL  LY+ +     LP S  +LS L+ +E+
Sbjct: 993  ESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEM 1029



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 172/643 (26%), Positives = 291/643 (45%), Gaps = 92/643 (14%)

Query: 419  SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGA-PNLEKLILEGCTRLYEIHPSLLL 477
            S++ E    +  L  L+ + LS   +L  +P+  GA  +L++L+L+G T +  +  S+  
Sbjct: 728  SKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDG-TAIKNLPESINR 786

Query: 478  HNKLIILNMKDCTSLITLPGKI-LMKSLEKL-----NLKSLPTTISGLKCLSTLDVSGDL 531
               L IL+++ C  +  LP  I  +KSLEKL      LK+LP++I  LK L  L +    
Sbjct: 787  LQNLEILSLRGC-KIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT 845

Query: 532  KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL----------- 580
               + P+ +  ++ L +L + G+A+  LPL    L  L   +  +C+ L           
Sbjct: 846  SLSKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLN 905

Query: 581  ------------EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIK 628
                        E LP  +  L  +R L+L  C  LK  P+ +  M  L  L L+G++I+
Sbjct: 906  SLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIE 965

Query: 629  EVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
            E+P     L KL  L +S+CK L RLP S   LKSL  L +     +  +PE+ G + +L
Sbjct: 966  ELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETL-VSELPESFGNLSNL 1024

Query: 689  EELD--------ISGTAVPHSTSWYSYIPI-NLMRKSVALKLPSLSGLCSLRKLNLTDCN 739
              L+        IS + VP ++    ++ + N   K   LKL  L   CS R        
Sbjct: 1025 MVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFSK--LLKLEELDA-CSWR-------- 1073

Query: 740  LMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
             + G +P D+  L  L +L L  N F SLP+S+  LS L  + L DC+ L+ LP LP  +
Sbjct: 1074 -ISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKL 1132

Query: 800  RQVRVNGCASLVTLLDALKLCK-SDSTMIACLDSLKLLG---------------NKSLAF 843
             Q+ +  C SL ++ D  +L   +D  +  C   + + G               N + + 
Sbjct: 1133 EQLNLANCFSLESVSDLSELTILTDLNLTNCAKVVDIPGLEHLTALKRLYMTGCNSNYSL 1192

Query: 844  SMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICC 903
            ++ +   +A     ++LS  +PG+ +P+WF   ++G      +P+     ++L G  I  
Sbjct: 1193 AVKKRLSKASLKMMRNLS--LPGNRVPDWF---SQGPVTFSAQPN-----RELRGVIIAV 1242

Query: 904  VFHVLKNSRGNNCFGSYPTHQLNCHI----GHGIYGIGFRDKFGQAGSDHLWLLYLSRQT 959
            V   L +   ++ +      ++   I     H            +  +D    L++ R +
Sbjct: 1243 VV-ALNDETEDDDYQLPDVMEVQAQIHKLDHHKCTNTLHLSGVPRTNNDQ---LHICRYS 1298

Query: 960  CYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVY 1002
             +    PL + L+   +  V +   P + QG+E+KM G+H VY
Sbjct: 1299 AFH---PLVTMLKDGYTIQV-IKRNPPIKQGVELKMHGIHLVY 1337



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 148/322 (45%), Gaps = 43/322 (13%)

Query: 399  LKFLPSNL-QMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPN 456
            LKFLP ++  MD    + +  S I EL +    L+KL  + +S+ + L R+P+ F    +
Sbjct: 941  LKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLKS 1000

Query: 457  LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
            L +L ++  T + E+  S    + L++L M     L  +    +  + E+     +P + 
Sbjct: 1001 LHRLYMKE-TLVSELPESFGNLSNLMVLEMLK-KPLFRISESNVPGTSEEPRFVEVPNSF 1058

Query: 517  SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
            S L  L  LD        + P+ +E +  L +L+L       LP S+  LS L  L+L++
Sbjct: 1059 SKLLKLEELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRD 1118

Query: 577  CRSLEILPVTVSNLKC-LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIE 635
            CR L+ LP     L C L  L L+ C  L+       S+ DLSE                
Sbjct: 1119 CRELKRLP----PLPCKLEQLNLANCFSLE-------SVSDLSE---------------- 1151

Query: 636  LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC---FKLENVPETLGQ--IESLEE 690
             LT L  LNL++C  +V +P  +  L +LK L ++GC   + L  V + L +  ++ +  
Sbjct: 1152 -LTILTDLNLTNCAKVVDIP-GLEHLTALKRLYMTGCNSNYSLA-VKKRLSKASLKMMRN 1208

Query: 691  LDISGTAVPHSTSWYSYIPINL 712
            L + G  VP    W+S  P+  
Sbjct: 1209 LSLPGNRVP---DWFSQGPVTF 1227


>gi|297804200|ref|XP_002869984.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315820|gb|EFH46243.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1046

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 259/695 (37%), Positives = 383/695 (55%), Gaps = 59/695 (8%)

Query: 1   MDSRCEKLR-FLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR ++L   LM    + +R IG+ GM G+GKTT+A  VY     +F+   FL+++   
Sbjct: 194 IESRSKELEELLMFDNKNCIRTIGVLGMTGIGKTTVADSVYKRNYRQFDGYCFLEDIENE 253

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S + GL  L ++LL +LL   +  I         L   L+ KK+ +V+D+V +  Q++ L
Sbjct: 254 SKRHGLHHLHQKLLCKLLDEENVDI----RAHGRLKDFLRNKKLFIVLDNVTEENQIEVL 309

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAF--KTYQPLQ 177
            G +E +  GSRI+IT+RD+ LL+ +  D +Y    LN  EA++LF + AF  K Y P +
Sbjct: 310 IGEQEMYRKGSRIVITTRDKKLLQNNA-DAIYVVPRLNDREAMELFCLDAFSDKLY-PTE 367

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
           E + LS   + YA G PLAL++LGS L  +    W    ERL + P  EI  +L++S++ 
Sbjct: 368 EFLDLSNNFVYYAKGHPLALKLLGSGLRQKERTYWVEKWERLMVMPDKEIQKVLKMSYEA 427

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDL 297
           L + +K IFLDIACFF+    D V++ L+         +R L +KCL+T   N L MHDL
Sbjct: 428 LDDEQKSIFLDIACFFRSEKADLVSSILKSDHV-----MRELEDKCLVTKSYNRLEMHDL 482

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           +  +G++I    S +  GKRSRLW  +++ +VL + TGTE V GI    ++  N   +  
Sbjct: 483 MHAMGKEIGYESSIKRAGKRSRLWNHKDIRNVLEQKTGTECVRGIF---FNMSNVERIKL 539

Query: 358 SAKAFSKMTNLRLLKICN------------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSN 405
           S   F +M+NL+ LK  N            +Q    L++  + L  L W+GYP ++LPS 
Sbjct: 540 SPDVFMRMSNLKFLKFHNSHCSQWCDNDHKIQFSKELDHFPDELVYLHWQGYPYEYLPSE 599

Query: 406 LQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
              ++ +++ + YS I +LW+  K  + L+ + LS S++L  +   + A NLE+L LEGC
Sbjct: 600 FNPEELVDLSLRYSYIKQLWEDDKKTENLRWVDLSQSKDLRSLSGLSKAKNLERLDLEGC 659

Query: 466 TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTL 525
           T L  +  S+   NKLI LN++DCTSL +LP        E +NLKSL T I         
Sbjct: 660 TSLVLLGSSIEKMNKLIYLNLRDCTSLESLP--------EGINLKSLKTLI--------- 702

Query: 526 DVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPV 585
            +SG    +EF  I +++E    L+LEG+AI  +   IE L  L+LLNLKNCR L+ LP 
Sbjct: 703 -LSGCSNLQEFQIISDNIE---SLYLEGSAIEQVVEHIESLRNLILLNLKNCRRLKYLPN 758

Query: 586 TVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNL 645
            +  LK L+ L LSGCS L+  P I   M+ L  L +DGTSIK+ P +I          L
Sbjct: 759 DLYKLKSLQELILSGCSALESLPPIKEEMECLEILLMDGTSIKQTPETI---------CL 809

Query: 646 SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
           S+ K      SSI     L  ++  GC  LE V E
Sbjct: 810 SNLKMFSFCGSSIEDSTGLHYVDAHGCVSLEKVAE 844



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 103/159 (64%), Gaps = 5/159 (3%)

Query: 544 EHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
           ++L  L LEG T++  L  SIE ++ L+ LNL++C SLE LP  + NLK L++L LSGCS
Sbjct: 649 KNLERLDLEGCTSLVLLGSSIEKMNKLIYLNLRDCTSLESLPEGI-NLKSLKTLILSGCS 707

Query: 603 KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
            L++F  I     ++  L+L+G++I++V   IE L  L LLNL +C+ L  LP+ +  LK
Sbjct: 708 NLQEFQIIS---DNIESLYLEGSAIEQVVEHIESLRNLILLNLKNCRRLKYLPNDLYKLK 764

Query: 663 SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHS 701
           SL+ L LSGC  LE++P    ++E LE L + GT++  +
Sbjct: 765 SLQELILSGCSALESLPPIKEEMECLEILLMDGTSIKQT 803



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 144/321 (44%), Gaps = 48/321 (14%)

Query: 585 VTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELL 643
           V +S  K LRSL  SG SK           K+L  L L+G TS+  + SSIE + KL  L
Sbjct: 631 VDLSQSKDLRSL--SGLSK----------AKNLERLDLEGCTSLVLLGSSIEKMNKLIYL 678

Query: 644 NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA----VP 699
           NL DC +L  LP  I  LKSLKTL LSGC  L+        IESL    + G+A    V 
Sbjct: 679 NLRDCTSLESLPEGI-NLKSLKTLILSGCSNLQEFQIISDNIESLY---LEGSAIEQVVE 734

Query: 700 HSTSWYSYIPINLMRKSVALKLPS-LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKEL 758
           H  S  + I +NL        LP+ L  L SL++L L+ C+ +E +LP     +  L+ L
Sbjct: 735 HIESLRNLILLNLKNCRRLKYLPNDLYKLKSLQELILSGCSALE-SLPPIKEEMECLEIL 793

Query: 759 YLSKNSFVSLP---------------TSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR 803
            +   S    P               +SI   + L  ++   C  L+ + +  P    + 
Sbjct: 794 LMDGTSIKQTPETICLSNLKMFSFCGSSIEDSTGLHYVDAHGCVSLEKVAE--PVTLPLV 851

Query: 804 VNGCASLVTLLDALKLCKSDSTMIACLDSLK--LLGNKSLAFSMLREYLEAVSNTRQHLS 861
            +   +     +  KL +++   I     LK  LL   SL  +     LE +      ++
Sbjct: 852 TDRMHTTFIFTNCFKLNRAEQEAIVAQAQLKSQLLARTSLQHNNKGLVLEPL------VA 905

Query: 862 VVVPGSEIPEWFMYQNEGSSI 882
           V  PGSEIP WF +Q  GS I
Sbjct: 906 VCFPGSEIPSWFSHQRMGSLI 926


>gi|356561802|ref|XP_003549167.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1048

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 259/696 (37%), Positives = 401/696 (57%), Gaps = 43/696 (6%)

Query: 1   MDSRCEKLRFLMDSGS-SDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR + ++ L++  S + V ++GI G+GG+GKTT+AR VY+ I+ +F+   FLD+VRE 
Sbjct: 196 LESRVQTVKSLLEFESDTGVHIVGIYGIGGMGKTTLARAVYNSIADQFKGLCFLDDVREN 255

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           ++K GL+ LQ  LLS+++   D  I +V  GI ++  RLQRKK+LL++DDV  ++QL++ 
Sbjct: 256 ATKHGLIHLQEMLLSEIVGEKDIKIGSVSKGISIIKHRLQRKKILLILDDVDKLEQLRAT 315

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G   WFGSGSR+I+T+RD+HLL +HGVD  Y+   LN +E+L+L    AFK    +  C
Sbjct: 316 VGGPNWFGSGSRVIVTTRDKHLLASHGVDRKYEVEDLNEEESLELLCWNAFKD-DKVDPC 374

Query: 180 VQ-LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
            + +S++ + YA GLPLALEV+GS L G+ + EW S LE+ +  P   I DIL++S++ L
Sbjct: 375 YKDISSQAVAYASGLPLALEVVGSLLFGKGIKEWESALEQYKKIPNKRIQDILKVSYNAL 434

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPV---IGIRVLIEKCLITVHNNTLWMH 295
           +E ++KIFLDIAC  KG +   V + L  C  + V    GI VL++K LI + N  + +H
Sbjct: 435 EEDQQKIFLDIACCLKGYELAEVEDIL--CAHYGVCMKYGIGVLVDKSLIKIKNGRVTLH 492

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDN--YHHENEV 353
           +L++ +G++I +++SP+ELGK  RLW  +++  VL E+TGT  +E I LD   +  + E 
Sbjct: 493 ELIEVMGKEIDRQESPKELGKHRRLWFHKDIIQVLAENTGTSEIEIISLDFPLFEEDEEA 552

Query: 354 YLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
           Y+    +AF KM NL+ L I N     G  +L N LR+L W  YPL+ LP++   +K   
Sbjct: 553 YVEWDGEAFKKMENLKTLIIRNSHFSKGPTHLPNSLRVLEWWTYPLQDLPTDFHSNKLAI 612

Query: 414 IYM---CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYE 470
             +   C++ + EL    K    L V+    +E L ++PD +   NL KL  E C  L  
Sbjct: 613 CKLPRSCFTSL-ELSGISKKFMNLTVLNFDGTECLTQIPDISSLQNLVKLTFECCENLVA 671

Query: 471 IHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGD 530
           IH S+   +KL IL+   C  L++ P  I + SLE+L+L S  +                
Sbjct: 672 IHDSVGFLDKLKILSAFGCGKLMSFP-PIKLISLEQLDLSSCSS---------------- 714

Query: 531 LKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
                FPEI+  ME++++L L+ T ++  P S   L+ L  L L +C +++ LP+++  L
Sbjct: 715 --LESFPEILGKMENITQLELKYTPLKEFPFSFRNLARLRDLVLVDCGNVQ-LPISIVML 771

Query: 591 KCLRSLKLSGCS-----KLKKFPEIVRSM-KDLSELFLDGTSIKE--VPSSIELLTKLEL 642
             L  +   GC      K  K  E V SM  +++ L L G ++ +   P  +   + ++ 
Sbjct: 772 PELAQIFALGCKGLLLPKQDKDEEEVSSMSSNVNCLCLSGCNLSDEYFPMVLAWFSNVKE 831

Query: 643 LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
           L LS C N   LP  I    SL  LNL  C  L+ +
Sbjct: 832 LELS-CNNFTFLPECIKECHSLILLNLDNCEHLQEI 866



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 144/344 (41%), Gaps = 88/344 (25%)

Query: 592 CLRSLKLSGCSK---------------LKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIE 635
           C  SL+LSG SK               L + P+I  S+++L +L  +   ++  +  S+ 
Sbjct: 619 CFTSLELSGISKKFMNLTVLNFDGTECLTQIPDI-SSLQNLVKLTFECCENLVAIHDSVG 677

Query: 636 LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
            L KL++L+   C  L+  P   I L SL+ L+LS C  LE+ PE LG++E++ +L++  
Sbjct: 678 FLDKLKILSAFGCGKLMSFPP--IKLISLEQLDLSSCSSLESFPEILGKMENITQLELKY 735

Query: 696 TAVPHSTSWYSYIPINLMRKSVALK------------LPSLSGLCSL------------- 730
           T  P     +S+  +  +R  V +             LP L+ + +L             
Sbjct: 736 T--PLKEFPFSFRNLARLRDLVLVDCGNVQLPISIVMLPELAQIFALGCKGLLLPKQDKD 793

Query: 731 -----------RKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLL 779
                        L L+ CNL +   P  +    ++KEL LS N+F  LP  I     L+
Sbjct: 794 EEEVSSMSSNVNCLCLSGCNLSDEYFPMVLAWFSNVKELELSCNNFTFLPECIKECHSLI 853

Query: 780 NIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNK 839
            + L++C+ LQ +  +PPN+       C SL     A+                      
Sbjct: 854 LLNLDNCEHLQEIRGIPPNLEYFSAGNCKSLSFCCTAM---------------------- 891

Query: 840 SLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSIT 883
                +L + L    NT       +PG+  PEWF  Q+ G S++
Sbjct: 892 -----LLNQELHETGNTM----FCLPGTRSPEWFEQQSIGPSLS 926


>gi|82542037|gb|ABB82026.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1070

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 256/705 (36%), Positives = 383/705 (54%), Gaps = 76/705 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD     + + + + + DVR+ GI GM G+GKTTIA+VV++ + + FE S FL N+ E S
Sbjct: 195 MDRLAHDIFYFLSTATDDVRIAGIHGMPGIGKTTIAKVVFNQLCYGFEGSCFLSNINETS 254

Query: 61  SK-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            +  GL  LQ+QLL  +LK    +I NV  G  ++  RL  K+VL+V DDV    QL +L
Sbjct: 255 KQLNGLALLQKQLLHDILKQDVANINNVDRGKVLIRERLCCKRVLVVADDVARQDQLNAL 314

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G R WFG GSR+I+T+RD +LL+    D  Y+   L  D++LQLF+  AFK  +P ++ 
Sbjct: 315 MGQRSWFGPGSRVIMTTRDSNLLRK--ADRTYQIEELTRDQSLQLFSWHAFKDTKPAEDY 372

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           ++LS   + Y GGLPLALEV+G+ LSG     W+S +++L   P  +I   L+ISFD L 
Sbjct: 373 IELSKDAVDYCGGLPLALEVIGACLSGEEKYIWKSEIDKLRRIPKHDIQGKLRISFDALD 432

Query: 240 ELE-KKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNNTLWMHDL 297
             E +  FLDIACFF   +++Y+T  L   C + P I ++ L ++ LI V   T+ MHDL
Sbjct: 433 GEELQNAFLDIACFFIDIEKEYITKVLGARCSYDPEIDLKTLRKRSLIKVLGGTITMHDL 492

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           L+++G+++V+  SP+E GKR+R+W +E+  +VL +  GT++VEG+ LD    E +     
Sbjct: 493 LRDMGREVVRETSPKEPGKRTRIWNQEDAWNVLEQQKGTDVVEGLALDVRASEAK---SL 549

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
           SA +F+KM  L LL+I  + L   L+ LS  L  + W   PLK+ PS++ +D    + M 
Sbjct: 550 SAGSFAKMKRLNLLQINGVHLTGSLKLLSKVLMWICWHECPLKYFPSDITLDNLAVLDMQ 609

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
           YS + ELWKG K L+KLK++ LSHS+NL++ P+   + +LEKLILEGC+ L         
Sbjct: 610 YSNLKELWKGEKILNKLKIINLSHSQNLVKTPNLHSS-SLEKLILEGCSSL--------- 659

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
                   +K C                   LK LP +I  +K L ++++SG  +  + P
Sbjct: 660 --------VKGC-----------------WRLKILPESIGNVKSLKSMNISGCSQLEKLP 694

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
           E ++ ME L EL  +G        SI          LK  R L +     S      +  
Sbjct: 695 EHMDDMESLIELLADGIENEQFLSSIR--------QLKYIRRLSLRGYNFSQNSPSSTFW 746

Query: 598 LSGCSKLKKFPEIVRSM---------KDLSELFLDGTSIK--EVPSS-----------IE 635
           LS  S    +P  + S          + L + F+D   +K  E+P +             
Sbjct: 747 LSPSSTF--WPPSISSFISASVLCLKRSLPKAFIDWRLVKSLELPDAGLSDHTTNCVDFR 804

Query: 636 LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
            L+ LE+L+LS  K    LPS I  L +L +L + GC  L ++P+
Sbjct: 805 GLSSLEVLDLSRNK-FSSLPSGIAFLPNLGSLIVVGCNNLVSIPD 848



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 144/369 (39%), Gaps = 113/369 (30%)

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVR---------- 653
           LK FP  + ++ +L+ L +  +++KE+    ++L KL+++NLS  +NLV+          
Sbjct: 591 LKYFPSDI-TLDNLAVLDMQYSNLKELWKGEKILNKLKIINLSHSQNLVKTPNLHSSSLE 649

Query: 654 -------------------LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
                              LP SI  +KSLK++N+SGC +LE +PE +  +ESL EL   
Sbjct: 650 KLILEGCSSLVKGCWRLKILPESIGNVKSLKSMNISGCSQLEKLPEHMDDMESLIELLAD 709

Query: 695 GTA---------------------------VPHSTSWYSYIPINLMRKSVALKLPSLSGL 727
           G                              P ST W S  P +           S S L
Sbjct: 710 GIENEQFLSSIRQLKYIRRLSLRGYNFSQNSPSSTFWLS--PSSTFWPPSISSFISASVL 767

Query: 728 CSLRKL--NLTDCNLMEG-ALPS-----------DIGNLCSLKELYLSKNSFVSLPTSIT 773
           C  R L     D  L++   LP            D   L SL+ L LS+N F SLP+ I 
Sbjct: 768 CLKRSLPKAFIDWRLVKSLELPDAGLSDHTTNCVDFRGLSSLEVLDLSRNKFSSLPSGIA 827

Query: 774 HLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSL 833
            L  L ++ +  C  L S+P LP N+  +    C SL        +C             
Sbjct: 828 FLPNLGSLIVVGCNNLVSIPDLPSNLGYLGATYCKSL-----ERAMCN------------ 870

Query: 834 KLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNK 893
              G     F   R                +PG E+P+W  Y+ EG S++   P      
Sbjct: 871 ---GGHIYHFHAER----------------IPG-EMPKWLSYRGEGCSLSFHIPPVF--- 907

Query: 894 KKLVGYAIC 902
           + LV + +C
Sbjct: 908 QGLVVWVVC 916


>gi|449494799|ref|XP_004159650.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 936

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 234/561 (41%), Positives = 344/561 (61%), Gaps = 11/561 (1%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++SR + L   +  GS+DVR +GI GMGGLGKTT+A+ +Y+ + H FEA  FL N++  +
Sbjct: 195 IESRLKLLLSHLHIGSNDVRFVGILGMGGLGKTTVAKALYNQLYHNFEAKCFLSNIKAET 254

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           S   L+ LQ+QLLS +    + ++ N+  GI +L  RL+ K++LL++DDV D+ QL +LA
Sbjct: 255 S--NLIHLQKQLLSSITNSTNINLGNIDQGIAVLQERLRCKRLLLILDDVDDLSQLTALA 312

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            +R+ F SGSRIIIT+RD HLL    VDE+     ++ DEAL+LF+  AF+   P +   
Sbjct: 313 TSRDLFASGSRIIITTRDRHLLNQLEVDEICSIDEMDDDEALELFSWHAFRNSYPSETFH 372

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           QLS +++ Y GGLPLALEVLGSFL GRS +EW  TL++L+  P  +I   L+ISFDGL +
Sbjct: 373 QLSKQVVTYCGGLPLALEVLGSFLFGRSREEWEDTLKKLKKIPNDQIQKKLKISFDGLND 432

Query: 241 -LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLL 298
              K IFLD++CFF G +R+YV   L+GCGF P IGI VL+++CL+T+ + N L MHDLL
Sbjct: 433 HTYKDIFLDVSCFFIGMERNYVEQILDGCGFFPRIGISVLLQRCLLTIGDKNRLMMHDLL 492

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           +++G++IV+   P+   + SRL+  EEV  VLT   GT+  EG+ L       +     S
Sbjct: 493 RDMGREIVRENFPKYPERHSRLFLHEEVLSVLTRQKGTDATEGLSLKLPRFSKQKL---S 549

Query: 359 AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
            KAF++M  LRLL++  + +    +++S  +R + W G+PLKFLP    MDK + + + Y
Sbjct: 550 TKAFNEMQKLRLLQLNFVDVNGDFKHISEEIRWVCWHGFPLKFLPKEFHMDKLVAMDLRY 609

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           S+I   WK  K L  LK + L HS  L   P+F+  PNLE L L+ C  L E  PS +  
Sbjct: 610 SQIRFFWKESKFLKNLKFLNLGHSHYLTHTPNFSKLPNLEILSLKDCKNLIEFLPSTISG 669

Query: 479 NKLIILNMKD-CTSLITLPG-KILMKSLEKLNLKSLPTT--ISGLKCLSTLDVSGDLKFR 534
              +   + D C  L  +P     + SL   N  SL  T  +S +K + +L +S   K  
Sbjct: 670 LLKLETLLLDNCPELQLIPNLPPHLSSLYASNCTSLERTSDLSNVKKMGSLSMSNCPKLM 729

Query: 535 EFPEIVEHMEHLSELHLEGTA 555
           E P + + ++ +  +H+EG +
Sbjct: 730 EIPGLDKLLDSIRVIHMEGCS 750



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 96/245 (39%), Gaps = 45/245 (18%)

Query: 710 INLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLP 769
           +NL         P+ S L +L  L+L DC                       KN    LP
Sbjct: 628 LNLGHSHYLTHTPNFSKLPNLEILSLKDC-----------------------KNLIEFLP 664

Query: 770 TSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDS-TMIA 828
           ++I+ L KL  + L++C  LQ +P LPP++  +  + C SL    D   + K  S +M  
Sbjct: 665 STISGLLKLETLLLDNCPELQLIPNLPPHLSSLYASNCTSLERTSDLSNVKKMGSLSMSN 724

Query: 829 CLDSLKLLGNKSLAFSMLREYLEAVSNTRQHL--------------SVVVPGSEIPEWFM 874
           C   +++ G   L  S+   ++E  SN                    V +PG E+P+WF 
Sbjct: 725 CPKLMEIPGLDKLLDSIRVIHMEGCSNMSNSFKDTILQGWTVSGFGGVCLPGKEVPDWFA 784

Query: 875 YQNEGSS-------ITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNC 927
           Y++E S+       I  T+ S   NK       +    H+ +    N  F   P  ++  
Sbjct: 785 YKDEVSTDLPSLSVINYTKSSITTNKPLTNDVIMSTQDHLWQGHLSNKAFKMEPGDEVEI 844

Query: 928 HIGHG 932
            +  G
Sbjct: 845 IVDFG 849



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 134/315 (42%), Gaps = 63/315 (20%)

Query: 459 KLILEGCTRLYEIHPSLLLHNKL--IILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
           +++ E   +  E H  L LH ++  ++   K   +   L  K+   S +KL+ K+    +
Sbjct: 498 EIVRENFPKYPERHSRLFLHEEVLSVLTRQKGTDATEGLSLKLPRFSKQKLSTKAF-NEM 556

Query: 517 SGLKCL--STLDVSGDLK----------FREFP------EIVEHMEHLSELHLEGTAIRG 558
             L+ L  + +DV+GD K          +  FP      E   HM+ L  + L  + IR 
Sbjct: 557 QKLRLLQLNFVDVNGDFKHISEEIRWVCWHGFPLKFLPKEF--HMDKLVAMDLRYSQIRF 614

Query: 559 LPLSIELLSGLVLLNL-----------------------KNCRSL-EILPVTVSNLKCLR 594
                + L  L  LNL                       K+C++L E LP T+S L  L 
Sbjct: 615 FWKESKFLKNLKFLNLGHSHYLTHTPNFSKLPNLEILSLKDCKNLIEFLPSTISGLLKLE 674

Query: 595 SLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRL 654
           +L L  C +L+  P +      LS L+    +  E  S +  + K+  L++S+C  L+ +
Sbjct: 675 TLLLDNCPELQLIPNLP---PHLSSLYASNCTSLERTSDLSNVKKMGSLSMSNCPKLMEI 731

Query: 655 PSSIIALKSLKTLNLSGCFKLEN-VPETLGQ---IESLEELDISGTAVPHSTSWYSYIPI 710
           P     L S++ +++ GC  + N   +T+ Q   +     + + G  VP    W++Y   
Sbjct: 732 PGLDKLLDSIRVIHMEGCSNMSNSFKDTILQGWTVSGFGGVCLPGKEVP---DWFAY--- 785

Query: 711 NLMRKSVALKLPSLS 725
              +  V+  LPSLS
Sbjct: 786 ---KDEVSTDLPSLS 797


>gi|105923139|gb|ABF81459.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
          Length = 1421

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 264/734 (35%), Positives = 395/734 (53%), Gaps = 56/734 (7%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MD     +   + + + DVR++GI GM G+GKTTIA+VV++ + + FE S FL N+ E  
Sbjct: 384  MDRLAHNIFDFLSTATDDVRIVGIHGMPGIGKTTIAKVVFNQLCYGFEGSCFLSNINETP 443

Query: 61   SK-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
             K  GLV LQ QLL  +LK    +   V  G  ++  R++RK+VL V DDV    QL +L
Sbjct: 444  KKLTGLVRLQTQLLRDILKQDVANFECVDRGKVLINERIRRKRVLFVADDVARQDQLNAL 503

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
             G R WFG GSR+IIT+RD +LL+    D+ Y+   L  D++LQLF+  AFK  +P ++ 
Sbjct: 504  MGERSWFGPGSRVIITTRDSNLLRK--ADQTYQIEELTRDQSLQLFSWHAFKHSKPAEDY 561

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            ++LS  ++ Y GGLPLALEV+G+ L G++   W+S +++L   P  +I   L+IS+D L 
Sbjct: 562  IELSKDVVDYCGGLPLALEVMGACLYGKNRGGWKSVIDKLRRIPNHDIQGKLRISYDSLD 621

Query: 240  ELE-KKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHN-NTLWMHD 296
              E +  FLDIACFF    + YV   L   CG++P + +  L  + LI V+    + MHD
Sbjct: 622  GEELRNAFLDIACFFIDRKKRYVAKVLGARCGYNPEVDLETLRGRSLIKVNAIGKITMHD 681

Query: 297  LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
            LL+++G+++V+  SP+E GKR+R+W +E+  +VL +  GT++VEG+ LD    E +    
Sbjct: 682  LLRDMGREVVRETSPKEPGKRTRIWNQEDAWNVLEQQKGTDVVEGLALDVRASEAK---S 738

Query: 357  ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
             S ++F+KM  L LL+I    L    + LS  L  + W   PLK+  S+  +D    + M
Sbjct: 739  LSTRSFAKMKRLNLLQINGAHLTGSFKLLSKELMWICWLQCPLKYFSSDFTLDNLAVLDM 798

Query: 417  CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             YS + ELWKG K L++LK++ L+HS+NLI+ P+   + +LEKL L+GC+ L E+H S+ 
Sbjct: 799  QYSNLKELWKGQKILNRLKILNLNHSKNLIKTPNLHSS-SLEKLKLKGCSSLVEVHQSIE 857

Query: 477  LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
                L+ LN++ C                  NLK LP +I  +K L TL++SG  +  + 
Sbjct: 858  NLTSLVFLNLEGC-----------------WNLKILPESIGNVKSLETLNISGCSQLEKL 900

Query: 537  PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL---------------E 581
            PE +  ME L+EL  +G        SI  L  +  L+L    S                +
Sbjct: 901  PECMGDMESLTELLADGIENEQFLTSIGQLKHVRRLSLCGYSSAPPSSSLNSAGVLNWKQ 960

Query: 582  ILPVTVSNLKCLRSLKLSGCSKLKKFPEIV--RSMKDLSELFLDGTSIKEVPSSIELLTK 639
             LP +    + +  L+LS      +    V    +  L  L L       +PS I  L K
Sbjct: 961  WLPTSFG-WRLVNHLELSNGGLSDRTTNCVDFSGLSALEVLDLTRNKFSSLPSGIGFLPK 1019

Query: 640  LELLNLSDCKNLVR---LPSSIIAL-----KSLKTLNLSGCFKLENVPETLGQIESLEEL 691
            L  L +  C+ LV    LPSS+  L     KSLK + +    K +   E L +  SLEE 
Sbjct: 1020 LRRLFVLACEYLVSILDLPSSLDCLVASHCKSLKRVRIPIEQKKDLYIE-LHESHSLEE- 1077

Query: 692  DISGTAVPHSTSWY 705
             I G     ++ WY
Sbjct: 1078 -IQGIEGRSNSFWY 1090



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 177/396 (44%), Gaps = 64/396 (16%)

Query: 543  MEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
            +++L+ L ++ + ++ L    ++L+ L +LNL + ++L   P   S+   L  LKL GCS
Sbjct: 790  LDNLAVLDMQYSNLKELWKGQKILNRLKILNLNHSKNLIKTPNLHSS--SLEKLKLKGCS 847

Query: 603  KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
                                   S+ EV  SIE LT L  LNL  C NL  LP SI  +K
Sbjct: 848  -----------------------SLVEVHQSIENLTSLVFLNLEGCWNLKILPESIGNVK 884

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISG-------TAVPH-------STSWYSYI 708
            SL+TLN+SGC +LE +PE +G +ESL EL   G       T++         S   YS  
Sbjct: 885  SLETLNISGCSQLEKLPECMGDMESLTELLADGIENEQFLTSIGQLKHVRRLSLCGYSSA 944

Query: 709  PINLMRKSVAL-----KLPSLSGLCSLRKLNLTDCNLMEGALPS-DIGNLCSLKELYLSK 762
            P +    S  +      LP+  G   +  L L++  L +      D   L +L+ L L++
Sbjct: 945  PPSSSLNSAGVLNWKQWLPTSFGWRLVNHLELSNGGLSDRTTNCVDFSGLSALEVLDLTR 1004

Query: 763  NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKS 822
            N F SLP+ I  L KL  + +  C+ L S+  LP ++  +  + C SL  +   ++  K 
Sbjct: 1005 NKFSSLPSGIGFLPKLRRLFVLACEYLVSILDLPSSLDCLVASHCKSLKRVRIPIEQKKD 1064

Query: 823  ---DSTMIACLDSLKLLGNKSLAF-------------SMLREYLEAVSNTRQHLSVVVPG 866
               +      L+ ++ +  +S +F              + +  +E + N R    +    
Sbjct: 1065 LYIELHESHSLEEIQGIEGRSNSFWYICSNQFSHSPKKLQKSVVEVMCNGRHPYRISPIR 1124

Query: 867  SEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
             E+P W     EG S++   PS     + LV + IC
Sbjct: 1125 GEMPNWMSCSGEGCSLSFHIPSVF---QGLVVWFIC 1157


>gi|357506067|ref|XP_003623322.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355498337|gb|AES79540.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1204

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 239/677 (35%), Positives = 376/677 (55%), Gaps = 49/677 (7%)

Query: 9   RFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSL 68
           R  + S +   +++GI GMGG+GKTT+A V+YD IS++F+   +++NV +I  +GG  ++
Sbjct: 201 RLKLSSRNGGFQVLGIWGMGGIGKTTLATVLYDRISYQFDTRCYIENVHKIYEEGGANAV 260

Query: 69  QRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGS 128
           Q+++L + ++      ++  +   ++  RLQ KK+L+V+D+V  ++QL  L   R +   
Sbjct: 261 QKEILRRTIEEKILDTYSPPEIARIVRDRLQNKKLLVVLDNVDQIEQLDELDIKRVFLRP 320

Query: 129 GSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIR 188
            SR+II +RD+H+L+  G D VY+   +N                       +L   +++
Sbjct: 321 ESRLIIITRDQHILRACGADIVYEVELMN-----------------------ELIPEVLK 357

Query: 189 YAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLD 248
           Y  GLPLA+ V+GSFL  R+  +WR+ L+RL+  PP +IL +LQ+S++GL+E +K+IFL 
Sbjct: 358 YTQGLPLAIRVIGSFLHSRNAKQWRAALDRLQNSPPDKILKVLQVSYEGLEEEDKEIFLH 417

Query: 249 IACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQR 308
           +ACFFKG  +DYV+  L+ CG HP IGI +L EK +IT+ N  + MH++LQELG++IV+ 
Sbjct: 418 VACFFKGERKDYVSRILDACGLHPDIGIPLLAEKSVITIKNEEIHMHEMLQELGKKIVRG 477

Query: 309 QSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNL 368
           + P+E G  SRLW   +  HV+         + IVL N   ++  +    A+  SK+ +L
Sbjct: 478 EHPDEPGFWSRLWLYRDFHHVMMTQKKAIEAKAIVL-NQKEDDFKFNELRAEDLSKLEHL 536

Query: 369 RLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGI 428
           +LL + +        +LSN LR L W  YP   LPSN Q    +E+ +  S + +LW  I
Sbjct: 537 KLLILNHKNFSGRPSFLSNSLRYLLWNDYPFISLPSNFQPYHLVELNLPGSSVEQLWTDI 596

Query: 429 KHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKD 488
           + +  LK M LS+S+NL   P F G  NLE+L   GC  L+ +HPS+ L  +L  L++++
Sbjct: 597 QQMPYLKRMDLSNSKNLKMTPCFKGMQNLERLDFAGCISLWHVHPSIGLLRELQFLSLQN 656

Query: 489 CTSLITLP-GKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLS 547
           CTSL+    G+                 +S    L  L +SG  K    P+  E + +L 
Sbjct: 657 CTSLVCFEFGR-----------------VSESSSLRVLCLSGCTKLENTPDF-EKLLNLE 698

Query: 548 ELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKK 606
            L ++  T++  +  SI  L+ L  L+L+ C +L I+P + +N+  L +L L GCS+   
Sbjct: 699 YLDMDQCTSLYKIDKSIGDLTKLRFLSLRGCTNLVIIPDSFNNMTNLMTLDLCGCSRFTN 758

Query: 607 FP----EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
            P        + + L  L L   +I  VP +I  L  LE LNL    N   LP +I  L 
Sbjct: 759 LPLGSVSSFHTQQSLISLDLSFCNISIVPDAIGELRGLERLNLQG-NNFTELPCTIQRLS 817

Query: 663 SLKTLNLSGCFKLENVP 679
           SL  LNLS C +L+  P
Sbjct: 818 SLAYLNLSHCHRLQIWP 834



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 142/561 (25%), Positives = 236/561 (42%), Gaps = 87/561 (15%)

Query: 435  KVMILSHSE-----NLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDC 489
            K ++L+  E     N +R  D +   +L+ LIL    + +   PS L  N L  L   D 
Sbjct: 509  KAIVLNQKEDDFKFNELRAEDLSKLEHLKLLILNH--KNFSGRPSFL-SNSLRYLLWND- 564

Query: 490  TSLITLPGKILMKSLEKLNL-----KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHME 544
               I+LP       L +LNL     + L T I  +  L  +D+S     +  P   + M+
Sbjct: 565  YPFISLPSNFQPYHLVELNLPGSSVEQLWTDIQQMPYLKRMDLSNSKNLKMTP-CFKGMQ 623

Query: 545  HLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPV-TVSNLKCLRSLKLSGCS 602
            +L  L   G  ++  +  SI LL  L  L+L+NC SL       VS    LR L LSGC+
Sbjct: 624  NLERLDFAGCISLWHVHPSIGLLRELQFLSLQNCTSLVCFEFGRVSESSSLRVLCLSGCT 683

Query: 603  KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
            KL+  P+                         E L  LE L++  C +L ++  SI  L 
Sbjct: 684  KLENTPDF------------------------EKLLNLEYLDMDQCTSLYKIDKSIGDLT 719

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
             L+ L+L GC  L  +P++   + +L  LD+ G       S ++ +P+          + 
Sbjct: 720  KLRFLSLRGCTNLVIIPDSFNNMTNLMTLDLCG------CSRFTNLPLG--------SVS 765

Query: 723  SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIE 782
            S     SL  L+L+ CN+    +P  IG L  L+ L L  N+F  LP +I  LS L  + 
Sbjct: 766  SFHTQQSLISLDLSFCNI--SIVPDAIGELRGLERLNLQGNNFTELPCTIQRLSSLAYLN 823

Query: 783  LEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIAC--LDSLKLLGNK- 839
            L  C RLQ  P +P  I     +       +    +  +S   +  C  L +  L+ N+ 
Sbjct: 824  LSHCHRLQIWPLIP--IESCPSDSVGRYFKIKSGSRDHRSGLYIFDCPKLATGFLMTNRE 881

Query: 840  --SLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLV 897
              +  F  LR  +E   + R    +++P  +   +F   ++ +S+   + S++       
Sbjct: 882  RSAYLFKWLRRLVEEPRHFRCGFDIIIPLRQ--GYFPCGSDWNSVLRIKESDI--DVDCR 937

Query: 898  GYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQA------------ 945
            GY    VF +  +S  ++     P   L+  + H  Y + F  +  +             
Sbjct: 938  GYLFSIVFKMNNHSEVSDS----PHQSLSSPMPHPFY-LSFESEHTEERFDIPLNLEQNV 992

Query: 946  --GSDHLWLLYLSRQTCYDIR 964
              GS ++W +Y+SR+ C+ ++
Sbjct: 993  VDGSTYIWTIYISREHCHFVK 1013



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 15/203 (7%)

Query: 394 WRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTG 453
           W  +P   L   LQ    + +  C S +   +  +     L+V+ LS    L   PDF  
Sbjct: 637 WHVHPSIGLLRELQF---LSLQNCTSLVCFEFGRVSESSSLRVLCLSGCTKLENTPDFEK 693

Query: 454 APNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKIL-MKSLEKLNL--- 509
             NLE L ++ CT LY+I  S+    KL  L+++ CT+L+ +P     M +L  L+L   
Sbjct: 694 LLNLEYLDMDQCTSLYKIDKSIGDLTKLRFLSLRGCTNLVIIPDSFNNMTNLMTLDLCGC 753

Query: 510 ---KSLP-TTISGLKCLSTLDVSGDLKFREF---PEIVEHMEHLSELHLEGTAIRGLPLS 562
               +LP  ++S      +L +S DL F      P+ +  +  L  L+L+G     LP +
Sbjct: 754 SRFTNLPLGSVSSFHTQQSL-ISLDLSFCNISIVPDAIGELRGLERLNLQGNNFTELPCT 812

Query: 563 IELLSGLVLLNLKNCRSLEILPV 585
           I+ LS L  LNL +C  L+I P+
Sbjct: 813 IQRLSSLAYLNLSHCHRLQIWPL 835


>gi|357449971|ref|XP_003595262.1| Heat shock protein [Medicago truncatula]
 gi|355484310|gb|AES65513.1| Heat shock protein [Medicago truncatula]
          Length = 1541

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 235/616 (38%), Positives = 356/616 (57%), Gaps = 36/616 (5%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGI 91
           K+T+AR VY+ IS +F+   FL  +RE +   GL  LQ  LLS++L   D  I +V+ GI
Sbjct: 226 KSTLARAVYNHISDQFDGVCFLAGIRESAINHGLAQLQETLLSEILGEEDIRIRDVYRGI 285

Query: 92  DMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVY 151
            ++  RLQRKKVLLV+DDV  VKQ+Q LAG  +WFG GS+I++T+RD+HLL  H +  +Y
Sbjct: 286 SIIKRRLQRKKVLLVLDDVDKVKQIQVLAGGHDWFGPGSKIVVTTRDKHLLAIHEILNLY 345

Query: 152 KPHGLNYDEALQLFNMKAFKTYQPLQECV-QLSARIIRYAGGLPLALEVLGSFLSGRSVD 210
           +   LN++++L LFN  AF+  + +  C   +S R + YA GLPLALEV+GS L G+S+D
Sbjct: 346 EVKQLNHEKSLDLFNWHAFRN-RKMDPCYSDMSNRAVSYASGLPLALEVIGSHLFGKSLD 404

Query: 211 EWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGF 270
            W+S+L++ E     EI +IL++S+D L + +K IFLDIACFF   +  Y    L   GF
Sbjct: 405 VWKSSLDKYERVLHKEIHEILKVSYDDLDDDQKGIFLDIACFFNSYEMSYAKELLYLHGF 464

Query: 271 HPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHV 329
               GI+VL +K LI +  N  + MHDL+Q++G++IV+++S  E G+RSRLW ++++ HV
Sbjct: 465 SAENGIQVLTDKSLIKIDANGCVRMHDLVQDMGREIVRQESTVEPGRRSRLWYDDDIVHV 524

Query: 330 LTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRL 389
           L  + GT+ +E I++ N  ++ EV    S KAF+KM NL++L I + +   G + L N L
Sbjct: 525 LETNMGTDTIEVIII-NLCNDKEVQW--SGKAFTKMKNLKILIIRSARFSRGPQKLPNSL 581

Query: 390 RLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMP 449
           R+L W GYP + LP++      + + +  S +   +K +K  + L  +     + L  +P
Sbjct: 582 RVLDWNGYPSQSLPADFNPKNLMILSLPESCLVS-FKLLKVFESLSFLDFEGCKLLTELP 640

Query: 450 DFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNL 509
             +G  NL  L L+ CT L  IH S+   NKL++L+ + C  L  L   I + SLE    
Sbjct: 641 SLSGLVNLGALCLDDCTNLIRIHKSIGFLNKLVLLSSQRCKQLELLVPNINLPSLE---- 696

Query: 510 KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGL 569
                         TLD+ G  + + FPE++  ME++  ++L+ T+I  LP SI  L GL
Sbjct: 697 --------------TLDIRGCSRLKSFPEVLGVMENIRYVYLDQTSIGKLPFSIRNLVGL 742

Query: 570 VLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK-----------KFPEIVRSMKDLS 618
             L L+ C SL  LP ++  L  L  +   GC   +            FPE +   K+ S
Sbjct: 743 RQLFLRECMSLTQLPDSIRILPKLEIITAYGCRGFRLFEDKEKVGSEVFPEAMLVCKEGS 802

Query: 619 ELFLDGTSIKEVPSSI 634
              LD +S+   P ++
Sbjct: 803 AESLDMSSLNICPDNV 818



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 93/168 (55%), Gaps = 5/168 (2%)

Query: 519 LKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNC 577
            + LS LD  G     E P +   + +L  L L+  T +  +  SI  L+ LVLL+ + C
Sbjct: 622 FESLSFLDFEGCKLLTELPSL-SGLVNLGALCLDDCTNLIRIHKSIGFLNKLVLLSSQRC 680

Query: 578 RSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELL 637
           + LE+L   + NL  L +L + GCS+LK FPE++  M+++  ++LD TSI ++P SI  L
Sbjct: 681 KQLELLVPNI-NLPSLETLDIRGCSRLKSFPEVLGVMENIRYVYLDQTSIGKLPFSIRNL 739

Query: 638 TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC--FKLENVPETLG 683
             L  L L +C +L +LP SI  L  L+ +   GC  F+L    E +G
Sbjct: 740 VGLRQLFLRECMSLTQLPDSIRILPKLEIITAYGCRGFRLFEDKEKVG 787



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 48/200 (24%)

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDC 648
            + L  L   GC  L + P +   + +L  L LD  T++  +  SI  L KL LL+   C
Sbjct: 622 FESLSFLDFEGCKLLTELPSL-SGLVNLGALCLDDCTNLIRIHKSIGFLNKLVLLSSQRC 680

Query: 649 KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI 708
           K L  L  +I  L SL+TL++ GC +L++ PE LG +E++  + +  T++          
Sbjct: 681 KQLELLVPNI-NLPSLETLDIRGCSRLKSFPEVLGVMENIRYVYLDQTSI---------- 729

Query: 709 PINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVS 767
                                             G LP  I NL  L++L+L +  S   
Sbjct: 730 ----------------------------------GKLPFSIRNLVGLRQLFLRECMSLTQ 755

Query: 768 LPTSITHLSKLLNIELEDCK 787
           LP SI  L KL  I    C+
Sbjct: 756 LPDSIRILPKLEIITAYGCR 775



 Score = 44.3 bits (103), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 24/189 (12%)

Query: 634 IELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDI 693
           +++   L  L+   CK L  LPS +  L +L  L L  C  L  + +++G +  L  L  
Sbjct: 619 LKVFESLSFLDFEGCKLLTELPS-LSGLVNLGALCLDDCTNLIRIHKSIGFLNKLVLLSS 677

Query: 694 SGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLC 753
                                K + L +P+++ L SL  L++  C+ ++ + P  +G + 
Sbjct: 678 QRC------------------KQLELLVPNIN-LPSLETLDIRGCSRLK-SFPEVLGVME 717

Query: 754 SLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP---QLPPNIRQVRVNGCASL 810
           +++ +YL + S   LP SI +L  L  + L +C  L  LP   ++ P +  +   GC   
Sbjct: 718 NIRYVYLDQTSIGKLPFSIRNLVGLRQLFLRECMSLTQLPDSIRILPKLEIITAYGCRGF 777

Query: 811 VTLLDALKL 819
               D  K+
Sbjct: 778 RLFEDKEKV 786


>gi|297804202|ref|XP_002869985.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315821|gb|EFH46244.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1122

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 235/611 (38%), Positives = 346/611 (56%), Gaps = 41/611 (6%)

Query: 8    LRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVS 67
            L FL  S  S V ++G+ GM G+GKT+IAR ++ +++ +++   FL +   +S K GL  
Sbjct: 535  LAFLNHSQPSGVEIVGLWGMAGIGKTSIAREIFGILAPKYDFCYFLQDFYLMSQKKGLRQ 594

Query: 68   LQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFG 127
            ++    S++ +    SI         +     +K +LLV+DDV D +  +++ G   WF 
Sbjct: 595  MRDDFFSKVFREEKLSISAYDIKPSFMRDWFHKKTILLVLDDVSDARDAEAVVGGFGWFS 654

Query: 128  SGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARII 187
             G RII+TSR + +L    V E YK   L   E+L+L         Q L E   +   ++
Sbjct: 655  QGHRIILTSRRKQVLVQCKVTESYKIQKLCEFESLRL-------CKQYLNEESGVILELM 707

Query: 188  RYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFL 247
              + G+PLAL+VLG  LS + ++  +  L  L   PP++I +  +  FDGL E EK IFL
Sbjct: 708  SCSSGIPLALKVLGFSLSKQHINNLKEHLHSLRKNPPTQIQEAFRRCFDGLDENEKNIFL 767

Query: 248  DIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQ 307
            D+ACFF G D D+V   L+ CGF   +GI  LI++ LI++ +N + +    Q++G+ IV 
Sbjct: 768  DLACFFSGEDIDHVVKLLDACGFFTYLGICDLIDESLISLLDNRIEIPIPFQDIGRFIVH 827

Query: 308  RQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTN 367
             +  E+  +RSRLW   ++  VL  ++GTE +EGI LD      E+    S   F KM N
Sbjct: 828  EED-EDPCERSRLWDSNDIADVLRNNSGTEAIEGIFLDASDLTCEL----SPTVFGKMYN 882

Query: 368  LRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
            LRLLK         C L LP GL+ L + LRLL W  YPL++LP     +  +EI+M YS
Sbjct: 883  LRLLKFYCSTSENECKLNLPQGLDTLPDELRLLHWENYPLEYLPHKFNPENLVEIHMPYS 942

Query: 420  RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
             + +LW+G K+L+KLK + LSHS  L  +   + A NLE + LEGCT L ++  S+    
Sbjct: 943  NMEKLWEGKKNLEKLKNIKLSHSRKLTDILMLSEALNLEHIDLEGCTSLIDVSTSIRHLG 1002

Query: 480  KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
            KL+ LNMKDC+ L TLP  + + SL++LN        SG                E  EI
Sbjct: 1003 KLVSLNMKDCSRLQTLPSMVNLTSLKRLNF-------SGCS--------------ELDEI 1041

Query: 540  VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
             +   +L EL+L GTAIR +PLSIE L+ LV L+L+NCR L+ LP+ +S+LK +  LKLS
Sbjct: 1042 QDFAPNLEELYLAGTAIREIPLSIENLTELVTLDLENCRRLQKLPMGISSLKSIVELKLS 1101

Query: 600  GCSKLKKFPEI 610
            GC+ L+ FP++
Sbjct: 1102 GCTSLQSFPKL 1112



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/137 (44%), Positives = 86/137 (62%), Gaps = 5/137 (3%)

Query: 545  HLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            +L  + LEG T++  +  SI  L  LV LN+K+C  L+ LP  V NL  L+ L  SGCS+
Sbjct: 979  NLEHIDLEGCTSLIDVSTSIRHLGKLVSLNMKDCSRLQTLPSMV-NLTSLKRLNFSGCSE 1037

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
            L    EI     +L EL+L GT+I+E+P SIE LT+L  L+L +C+ L +LP  I +LKS
Sbjct: 1038 LD---EIQDFAPNLEELYLAGTAIREIPLSIENLTELVTLDLENCRRLQKLPMGISSLKS 1094

Query: 664  LKTLNLSGCFKLENVPE 680
            +  L LSGC  L++ P+
Sbjct: 1095 IVELKLSGCTSLQSFPK 1111



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 49/208 (23%)

Query: 589  NLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSD 647
            NL+ L+++KLS   KL     +  ++ +L  + L+G TS+ +V +SI  L KL  LN+ D
Sbjct: 953  NLEKLKNIKLSHSRKLTDILMLSEAL-NLEHIDLEGCTSLIDVSTSIRHLGKLVSLNMKD 1011

Query: 648  CKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSY 707
            C  L  LPS ++ L SLK LN SGC +L+ + +      +LEEL ++GTA+         
Sbjct: 1012 CSRLQTLPS-MVNLTSLKRLNFSGCSELDEIQDF---APNLEELYLAGTAIRE------- 1060

Query: 708  IPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS 767
            IP+            S+  L  L  L+L +C  ++                         
Sbjct: 1061 IPL------------SIENLTELVTLDLENCRRLQ------------------------K 1084

Query: 768  LPTSITHLSKLLNIELEDCKRLQSLPQL 795
            LP  I+ L  ++ ++L  C  LQS P+L
Sbjct: 1085 LPMGISSLKSIVELKLSGCTSLQSFPKL 1112



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 96/173 (55%), Gaps = 15/173 (8%)

Query: 650  NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG--TAVPHSTSWY-- 705
            N+ +L      L+ LK + LS   KL ++   L +  +LE +D+ G  + +  STS    
Sbjct: 943  NMEKLWEGKKNLEKLKNIKLSHSRKLTDIL-MLSEALNLEHIDLEGCTSLIDVSTSIRHL 1001

Query: 706  -SYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLC-SLKELYLSKN 763
               + +N+   S    LPS+  L SL++LN + C+ ++     +I +   +L+ELYL+  
Sbjct: 1002 GKLVSLNMKDCSRLQTLPSMVNLTSLKRLNFSGCSELD-----EIQDFAPNLEELYLAGT 1056

Query: 764  SFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV---RVNGCASLVTL 813
            +   +P SI +L++L+ ++LE+C+RLQ LP    +++ +   +++GC SL + 
Sbjct: 1057 AIREIPLSIENLTELVTLDLENCRRLQKLPMGISSLKSIVELKLSGCTSLQSF 1109


>gi|227438175|gb|ACP30577.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1235

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 310/902 (34%), Positives = 466/902 (51%), Gaps = 77/902 (8%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M +  EK+  L+  GS +VRMIGI G  G+GKTTIARV Y  +S+ F+ S F+D+++   
Sbjct: 249  MGAHLEKMEPLLCLGSDEVRMIGIWGPPGIGKTTIARVAYSKLSNNFQLSVFMDDLKANY 308

Query: 61   SK--GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            ++      SL+ QL  Q +    N    V   + +  +RL+ KKVL+V+D V    QL++
Sbjct: 309  TRLCSDDYSLKLQLQQQFMSQITNQKDMVVSHLGVASNRLKDKKVLVVLDGVDQSVQLEA 368

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            +A    WFG GSRIIIT++D+ L + HGV+ +YK +    DEALQ+F   +F    P   
Sbjct: 369  MAKETWWFGPGSRIIITAQDQKLFRAHGVNLIYKVNFPTDDEALQIFCTYSFGQKSPKDG 428

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
              +L+  + R AG LPL L V+GS+  G S  EW ++L RL+    S+I  IL+ S+D L
Sbjct: 429  FEELAREVTRLAGELPLGLRVMGSYFRGMSKQEWTNSLPRLKTSLDSDIRSILKFSYDAL 488

Query: 239  QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
             + +K +FL IACFF   +   V   L          + VL EK LI++ +  + MH LL
Sbjct: 489  DDEDKDLFLHIACFFNSQEIHKVEEHLAKKFLEVRQRLNVLAEKSLISIDSGVITMHSLL 548

Query: 299  QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLT-ESTGTELVEGIVLDNYHHENEVYLCA 357
            ++LG++IV +QS  E   R  LW+E E+  VLT ++TG++ V GI L  Y+ E E  +  
Sbjct: 549  EKLGREIVCKQSIHEPRLRQFLWEETEIFEVLTGDTTGSKSVIGIKL-KYNTEGE-KIEI 606

Query: 358  SAKAFSKMTNLRLLKICN----LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
            S KAF  M+NL+ LK+      LQL  GL Y+S++LR L W  +P+  LPS L ++  +E
Sbjct: 607  SEKAFEGMSNLQFLKVSGYSHPLQLTRGLNYISHKLRFLQWTHFPMTCLPSILNLEFLVE 666

Query: 414  IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
            + M  S++ +LW+G K L  LK M LS+SENL  +PD + A NLE L L  C+ L ++  
Sbjct: 667  LIMHTSKLEKLWEGTKPLRCLKWMDLSYSENLKELPDLSTATNLE-LDLSNCSSLIKL-- 723

Query: 474  SLLLHNKLIILNMKDCTSLITLPGKILMK-SLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
              L  N L  L +  C+SL+  P  I    SL KL+L S P  +                
Sbjct: 724  PYLNGNSLEKLYIGGCSSLVEFPSFIENAVSLRKLDLTSYPNLL---------------- 767

Query: 533  FREFPEIVEHMEHLSELHLEGT-AIRGLPLSIELLSGLVLLNLKNCRSLEILPV--TVSN 589
              E P  V +  +L EL+L     +  LPLS+  L  L  L LK C  LE+ P    V +
Sbjct: 768  --ELPSYVGNATNLDELYLSNCLDLVELPLSLGNLQKLKKLVLKGCSKLEVFPTNFNVES 825

Query: 590  LKCL-----RSLKLSGCSKLKKFPEI-VRSMKDLSELFLDGTSIKEVPSSIELLTKLELL 643
            L+ L      SL L GCS +   P + + +++ L +L        ++PS I     L  L
Sbjct: 826  LEILCLAGCSSLDLGGCSTIGNVPSLRMLNLRSLPQLL-------DLPSFIGNAINLYYL 878

Query: 644  NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV----P 699
            +LS C NLV LP  I  L+ L  L L GC KLE +P  +  +ESL  L++   ++    P
Sbjct: 879  DLSGCSNLVELPVFIGNLQKLYMLGLEGCSKLEFLPTNI-NLESLSWLNLRDCSMLKCFP 937

Query: 700  HSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDC-NLMEGALPSDIGNLCSLKEL 758
              ++  +   ++L   ++    PS+     L  L ++   NL E   P     L  + EL
Sbjct: 938  QIST--NIRDLDLTGTAIEQVPPSIRSWPRLEDLTMSYFENLKE--FPH---ALERITEL 990

Query: 759  YLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALK 818
             L+      LP  +  +S L +  L+ C++L S+P +  +IR +  + C SL  L  +  
Sbjct: 991  CLTDTDIQELPPWVKQISCLNSFVLKGCRKLVSIPPISDSIRFLDASDCESLEILECSFH 1050

Query: 819  LCKSDSTMIACLDSLKLLGNKSLAFSMLREYLE-AVSNTRQHLSVVVPGSEIPEWFMYQN 877
               S      C             F + +E  +  + N+R+    V+PG ++P +F ++ 
Sbjct: 1051 NQISRLNFANC-------------FKLNQEARDLIIQNSRE---AVLPGGQVPAYFTHRA 1094

Query: 878  EG 879
             G
Sbjct: 1095 TG 1096


>gi|297850938|ref|XP_002893350.1| hypothetical protein ARALYDRAFT_313276 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297339192|gb|EFH69609.1| hypothetical protein ARALYDRAFT_313276 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1541

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 336/1213 (27%), Positives = 558/1213 (46%), Gaps = 228/1213 (18%)

Query: 16   SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS-KGGLVSLQRQLLS 74
            SS V+++G+ GMGG+GKTT+++  Y+ +   F+   F+ ++RE SS + GLV+LQ+ L+ 
Sbjct: 368  SSGVKVLGLYGMGGIGKTTLSKAFYNKVVGNFKQRAFISDIRERSSAENGLVTLQKTLIK 427

Query: 75   QLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIII 134
            +L +L    I +V  G++ +   +  KK+++V+DDV  + Q+ +L G   W+G G+ I+I
Sbjct: 428  ELFRLVP-EIEDVSRGLEKIKENVHEKKIIVVLDDVDHIDQVNALVGETRWYGQGTLIVI 486

Query: 135  TSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLP 194
            T+RD  +L    V++ Y+   L   ++L+LF+  + +  +P +  ++LS  I+R +G LP
Sbjct: 487  TTRDSEILSKLSVNQQYEVKCLTEPQSLKLFSYHSLRKEKPPKNLLKLSTEIVRISGLLP 546

Query: 195  LALEVLGSFLSGRSVD-EWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFF 253
            LA+EV GS L  +  + +W++ L +L+   P  + D+L +SF+ L + EKK+FLDIAC F
Sbjct: 547  LAVEVFGSLLYDKKEEKDWQTQLGKLKKTQPHNLQDVLALSFESLDDEEKKVFLDIACLF 606

Query: 254  KGND--RDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELGQQIVQRQS 310
               +  +  V   L+GCG +    + VL +K L+ +  ++TLWMHD ++++G+Q+V ++S
Sbjct: 607  LKMEIKKVEVVIILKGCGLNAEAALSVLRQKSLVKILADDTLWMHDQIRDMGRQMVLKES 666

Query: 311  PEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD------------------------- 345
             E  G RSRLW   E+  VL    GT  + GIVLD                         
Sbjct: 667  GENPGMRSRLWDRGEIMTVLNNVKGTSSIRGIVLDFKKKFVRDPTADEIASMNLTNNLGI 726

Query: 346  ----NYHHENEVYLCASAK-----------AFSKMTNLRLLKICNLQLPNGLEYLSNRLR 390
                +Y     V   A  K           +F  MT LRLL+I N++L   L+ L + L+
Sbjct: 727  NSVFSYLKSKFVRFPAEEKTKSSEITIPVESFVPMTELRLLQINNVELEGNLKLLPSELK 786

Query: 391  LLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELW--KGIKHLDKLKVMILSHSENLIRM 448
             + W+G PL+ LP +    +   + +  S I  +   +  +  + LKV+IL    +L  +
Sbjct: 787  WIQWKGCPLENLPPDFLARQLSVLDLSESGIRRVQTLRSNRVDENLKVLILRGCHSLEAI 846

Query: 449  PDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN 508
            PD +    LE L+ E CT L ++  S+    KL+ L+   C+                  
Sbjct: 847  PDLSNHEALEMLVFEQCTLLVKVPKSVGNLRKLLHLDFSRCS-----------------K 889

Query: 509  LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSG 568
            L      +SGLK L  L +SG       PE +  M  L EL L+GTAI+ LP SI  L  
Sbjct: 890  LSEFLADVSGLKRLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIKYLPESINRLQN 949

Query: 569  LVLLNLKNCR-----------------------SLEILPVTVSNLKCLRSLKLSGCSKLK 605
            L +L+L  CR                       +L+ LP ++ +LK L+ L L  C+ L 
Sbjct: 950  LEILSLSGCRYIPELPLCIGTLKSLEKLYLNDTALKNLPSSIGDLKKLQDLHLVRCTSLS 1009

Query: 606  KFPEIVRSMKDLSELFLDGTSI------------------------KEVPSSI------- 634
            K P+ +  +  L +LF+ G+++                        K+VPSSI       
Sbjct: 1010 KIPDSINELISLKKLFITGSAVEELPLKPSSLPSLTDFSAGGCKFLKQVPSSIGGLNSLL 1069

Query: 635  -------------------ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
                                 + KLEL+N   C+ L  LP SI  + +L +LNL G   +
Sbjct: 1070 QLQLNTTLIEALPKEIGALHFIRKLELMN---CEFLKFLPKSIGDMDTLCSLNLEGS-NI 1125

Query: 676  ENVPETLGQIESLEELDISGTAV----PHSTSWYSYIPINLMRKSVALKLP--------- 722
            E +PE  G++E+L EL +S   +    P S      +    M++++  +LP         
Sbjct: 1126 EELPEEFGKLENLVELRMSNCTMLKRLPESFGDLKSLHHLYMKETLVSELPESFGNLSKL 1185

Query: 723  --------------------------------SLSGLCSLRKLNLTDCNLMEGALPSDIG 750
                                            S S L SL +L+     +  G +P D+ 
Sbjct: 1186 MVLEMLKNPLFRISESNAPGTSEEPRFVEVPNSFSNLTSLEELDARSWRI-SGKIPDDLE 1244

Query: 751  NLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
             L SL +L L  N F SLP+S+  LS L  + L DC+ L+ LP LP  +  + +  C SL
Sbjct: 1245 KLSSLMKLNLGNNYFHSLPSSLVGLSNLQELSLRDCRELKRLPPLPCKLEHLNMANCFSL 1304

Query: 811  --------VTLLDALKLCKSDSTM-------IACLDSLKLLG-NKSLAFSMLREYLEAVS 854
                    +T+L+ L L      +       +  L  L + G N + + ++ +   +A  
Sbjct: 1305 ESVSDLSELTILEDLNLTNCGKVVDIPGLEHLMALKRLYMTGCNSNYSLAVKKRLSKASL 1364

Query: 855  NTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGN 914
               ++LS  +PG+ +P+W    ++G      +P+     K+L G  I  V   L N   +
Sbjct: 1365 KMLRNLS--LPGNRVPDWL---SQGPVTFSAQPN-----KELRGVIIAVVV-ALNNETED 1413

Query: 915  NCFGSYPTHQLNCHI---GHGIYGIGFR-DKFGQAGSDHLWLLYLSRQTCYDIRLPLESN 970
            + +      ++   I    H +           +  +D    L++ R + +    PL + 
Sbjct: 1414 DDYQLPDVMEVQAQIHKLDHNVCTNTLHLQGVPRTSNDQ---LHICRFSAFH---PLVTM 1467

Query: 971  LEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYM--DEVEELDQTTNQPSRFTVYNLNEFD 1028
            L+   +  V +   P + QG+E+KM G+H VY   D++E  + T  +  +     L  F 
Sbjct: 1468 LKDGYTIQV-IKRNPPIKQGVELKMHGIHLVYEGDDDLEGRENTLPETQQTVSQKLANFF 1526

Query: 1029 QHFVGSKMIVATT 1041
              F  +   V +T
Sbjct: 1527 SSFEETSSEVDST 1539


>gi|225448269|ref|XP_002270337.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1256

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 302/875 (34%), Positives = 453/875 (51%), Gaps = 95/875 (10%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +D R +++   +D  S  VR++GI G+GG+GKTTIARV+Y+ +S EFE   FL+N+R +S
Sbjct: 197  IDFRLKEMDLRLDMESDAVRIVGIYGIGGIGKTTIARVIYNNLSSEFECMSFLENIRGVS 256

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWN---VFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
            +  GL  LQ QLL  +L      I N   V  G  M+ S L  K+V +V+DDV ++ QL+
Sbjct: 257  NTRGLPHLQNQLLGDIL--GGEGIQNINCVSHGAIMIKSILSSKRVFIVLDDVDNLVQLE 314

Query: 118  SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
             L  NR W G GSR+IIT+R++HLL   GVD++Y+   LN++EA +LF++ AFK   P  
Sbjct: 315  YLLRNRGWLGKGSRVIITTRNKHLLNVQGVDDLYEVDQLNFNEAYELFSLYAFKQNHPKS 374

Query: 178  ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
              V LS   + Y   LPLAL+VLGS L  +++ +W S L +LE  P +EI ++L+ S+DG
Sbjct: 375  GFVNLSYSAVSYCQHLPLALKVLGSLLFSKTIPQWESELLKLERVPEAEIHNVLKRSYDG 434

Query: 238  LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDL 297
            L   EK IFLDIACFFK  DRD+V   L+GC FH   GI  LI+K LIT+  N + +HDL
Sbjct: 435  LDRTEKNIFLDIACFFKDEDRDFVLRILDGCNFHAERGIENLIDKSLITLSYNQIRLHDL 494

Query: 298  LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
            +Q++G +IV+   P E  K SRLW   ++   LT   G + VE I LD    +   +   
Sbjct: 495  IQQMGWEIVRENFPNEPDKWSRLWDPHDIERALTTYEGIKGVETINLDLSKLKRVRF--- 551

Query: 358  SAKAFSKMTNLRLLKI-CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK---TIE 413
            ++  FSKM+ LRLLK+  N+ L + L Y S  L      GY   +    +  ++   T+ 
Sbjct: 552  NSNVFSKMSRLRLLKVHSNVNLDHDLFYDSEELE----EGYSEMYKLEEMLFNRNFVTVR 607

Query: 414  IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL----- 468
            +   +S         +  ++  +    + +  + +P   G       ++E  +++     
Sbjct: 608  LDKVHSDHDSEDIEEEEEEEDIMASEDYHDYEVAIPCMVGY----DFVMETASKMRLGLD 663

Query: 469  YEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL-----NLKSLPTTISGLKCLS 523
            +EI PS  L          D   L +LP     ++L +L     N+K L      L+ L 
Sbjct: 664  FEI-PSYELRYLYW-----DGYPLDSLPSNFDGENLVELHLKCSNIKQLWQGNKYLESLK 717

Query: 524  TLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEI 582
             +D+S   K  + PE    + +L  L L+G  ++  +  SI  L  L  LNLK C  ++ 
Sbjct: 718  VIDLSYSTKLIQMPEF-SSLSNLERLILKGCVSLIDIHPSIGGLKKLTTLNLKWCLKIKG 776

Query: 583  LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSI-------- 634
            LP ++S L+ L+ L LS CS   KF EI  +M+ L E +L  T+ K++P+SI        
Sbjct: 777  LPSSISMLESLQLLDLSKCSSFCKFSEIQGNMRCLREPYLKETATKDLPTSIGNSRSFWD 836

Query: 635  ----------------ELLTKLELLNLSDCKNLVR-LPSSIIALKSLKTLNLSGCFKLEN 677
                            + +  L LL L  CK  +R LPSS I L+S++ L+LS CFK E 
Sbjct: 837  LYPCGRSNLEKFLVIQQNMRSLRLLYL--CKTAIRELPSS-IDLESVEILDLSNCFKFEK 893

Query: 678  VPETLGQIESLEELDISGTAVPH----STSWYSYIPINLMRKSVALKLPSLSG------- 726
              E    ++SL +L ++ TA+        +W S   ++L + S   K P + G       
Sbjct: 894  FSENGANMKSLRQLVLTNTAIKELPTGIANWESLRTLDLSKCSKFEKFPEIQGNMTSLKK 953

Query: 727  -----------------LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLP 769
                             L SL  LN++DC+  E   P   GN+ SLKEL L   +   LP
Sbjct: 954  LLLNNTAIKGLPDSIGYLKSLEILNVSDCSKFEN-FPEKGGNMKSLKELSLKNTAIKDLP 1012

Query: 770  TSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRV 804
             SI  L  L  ++L +C + +  P+   N++ +RV
Sbjct: 1013 DSIGDLESLWFLDLTNCSKFEKFPEKGGNMKSLRV 1047



 Score =  252 bits (644), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 198/632 (31%), Positives = 302/632 (47%), Gaps = 79/632 (12%)

Query: 345  DNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
            ++YH       C     F   T  ++    + ++P      S  LR L W GYPL  LPS
Sbjct: 633  EDYHDYEVAIPCMVGYDFVMETASKMRLGLDFEIP------SYELRYLYWDGYPLDSLPS 686

Query: 405  NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
            N   +  +E+++  S I +LW+G K+L+ LKV+ LS+S  LI+MP+F+   NLE+LIL+G
Sbjct: 687  NFDGENLVELHLKCSNIKQLWQGNKYLESLKVIDLSYSTKLIQMPEFSSLSNLERLILKG 746

Query: 465  CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI-LMKSLEKLNL-------------- 509
            C  L +IHPS+    KL  LN+K C  +  LP  I +++SL+ L+L              
Sbjct: 747  CVSLIDIHPSIGGLKKLTTLNLKWCLKIKGLPSSISMLESLQLLDLSKCSSFCKFSEIQG 806

Query: 510  ---------------KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT 554
                           K LPT+I   +    L   G     +F  I ++M  L  L+L  T
Sbjct: 807  NMRCLREPYLKETATKDLPTSIGNSRSFWDLYPCGRSNLEKFLVIQQNMRSLRLLYLCKT 866

Query: 555  AIRGLPLSIELLSGLVLLNLKNCRSLEI-----------------------LPVTVSNLK 591
            AIR LP SI+L S + +L+L NC   E                        LP  ++N +
Sbjct: 867  AIRELPSSIDLES-VEILDLSNCFKFEKFSENGANMKSLRQLVLTNTAIKELPTGIANWE 925

Query: 592  CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
             LR+L LS CSK +KFPEI  +M  L +L L+ T+IK +P SI  L  LE+LN+SDC   
Sbjct: 926  SLRTLDLSKCSKFEKFPEIQGNMTSLKKLLLNNTAIKGLPDSIGYLKSLEILNVSDCSKF 985

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA----VPHSTSWYSY 707
               P     +KSLK L+L     ++++P+++G +ESL  LD++  +     P        
Sbjct: 986  ENFPEKGGNMKSLKELSLKNT-AIKDLPDSIGDLESLWFLDLTNCSKFEKFPEKGGNMKS 1044

Query: 708  IPINLMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFV 766
            + +  +  +    LP S+  L SL  L+L+DC+  E   P   GN+ SLK+L L   +  
Sbjct: 1045 LRVLYLNDTAIKDLPDSIGDLESLEFLDLSDCSKFE-KFPEKGGNMKSLKKLSLKNTAIK 1103

Query: 767  SLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTM 826
             LP SI  L  L  ++L DC + +  P+   N++ +       L     A+K   ++ + 
Sbjct: 1104 DLPYSIRDLESLWFLDLSDCSKFEKFPEKGGNMKSL-----MDLRLKNTAIKDLPNNISG 1158

Query: 827  IACLDSLKLLGNKSLAFSMLREYLEAVSNTR------QHLSVVVP-GSEIPEWFMYQNEG 879
            +  L++L L G   L   ++   L  +            L+ V+P  S I EW  Y   G
Sbjct: 1159 LKFLETLNLGGCSDLWEGLISNQLCNLQKINIPELKCWKLNAVIPESSGILEWIRYHILG 1218

Query: 880  SSITVTRPSNLYNKKKLVGYAICCVFHVLKNS 911
            S +T   P N Y      G+ + CV+  ++ S
Sbjct: 1219 SEVTAKLPMNWYEDLDFPGFVVSCVYRDIRTS 1250


>gi|359493227|ref|XP_002264747.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1536

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 243/653 (37%), Positives = 371/653 (56%), Gaps = 58/653 (8%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EKL+ +M++  + V +IGICG GG+GKTTIA  +Y+ IS+++++S FL N+RE  S+G  
Sbjct: 203 EKLKLMMNTELNKVSVIGICGPGGIGKTTIAEAIYNKISYQYDSSSFLRNIRE-KSQGDT 261

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
           + LQ +LL  +LK     I N+ +G+ M+   L  K+VL+++DDV D+KQL+ LA  ++W
Sbjct: 262 LQLQNELLHDILKEKGFKISNIDEGVTMIKRCLNSKRVLVILDDVDDLKQLKHLAQKKDW 321

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSAR 185
           F + S IIITSRD+ +L  +GVD  Y+    +  EA++LF++ AF+   P +    LS  
Sbjct: 322 FNAKSTIIITSRDKQVLTRYGVDTPYEVQKFDKKEAIELFSLWAFQENLPKEAYENLSYN 381

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           +I YA GLPLAL++LG+ L G+ + EW S L +L+  P  EI  +L+ISFDGL +++K+I
Sbjct: 382 MIEYADGLPLALKLLGASLFGKKISEWESALYKLKRIPHMEINKVLRISFDGLDDMDKEI 441

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQI 305
           FLD+ACFFKG  +D+V+  L   G H   GI  L +KCLIT+  N + MHDL+Q++G++I
Sbjct: 442 FLDVACFFKGKSKDFVSRIL---GPHAEYGIATLNDKCLITISKNMMDMHDLIQQMGKEI 498

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKM 365
           ++++  ++LG+RSR+W + +   VLT +    +++ + L   H ++E Y C S   FS+ 
Sbjct: 499 IRQECLDDLGRRSRIW-DSDAYDVLTRN----MMDRLRLLKIHKDDE-YGCIS--RFSRH 550

Query: 366 TNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELW 425
            + +L       LP   E+ S  L    W GY L+ LP+N      +E+ +  S I +LW
Sbjct: 551 LDGKLFS--EDHLPRDFEFPSYELTYFHWDGYSLESLPTNFHAKDLVELILRGSNIKQLW 608

Query: 426 KGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILN 485
           +G K  +KL V+ LSHS +L  +PDF+  PNLE L L+GC +L  +   +     L  L+
Sbjct: 609 RGNKLHNKLNVINLSHSVHLTEIPDFSSVPNLEILTLKGCVKLECLPRGIYKWKHLQTLS 668

Query: 486 MKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEH 545
             DC+ L   P                                         EI  +M  
Sbjct: 669 CGDCSKLKRFP-----------------------------------------EIKGNMRK 687

Query: 546 LSELHLEGTAIRGLPLSIEL--LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           L EL L GTAI  LP S     L  L +L+ + C  L  +P  V  L  L  L LS C+ 
Sbjct: 688 LRELDLSGTAIEELPSSSSFGHLKALKILSFRGCSKLNKIPTDVCCLSSLEVLDLSYCNI 747

Query: 604 LK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           ++   P  +  +  L EL L     + +P++I  L++L++LNLS C+NL  +P
Sbjct: 748 MEGGIPSDICRLSSLKELNLKSNDFRSIPATINRLSRLQVLNLSHCQNLEHIP 800



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/353 (37%), Positives = 188/353 (53%), Gaps = 46/353 (13%)

Query: 551  LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI 610
             E + ++ LP+ IE    L  L L+ C+ L+ LP ++   K L +L   GCS+L+ FPEI
Sbjct: 1071 FEDSDMKELPI-IENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEI 1129

Query: 611  VRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLS 670
            +  M+ L +L L G++IKE+PSSI+ L  L+ LNL+ CKNLV LP SI  L SLKTL + 
Sbjct: 1130 LEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIK 1189

Query: 671  GCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSL 730
             C +L+ +PE LG+++SLE L +                      S+  + PSLSGLCSL
Sbjct: 1190 SCPELKKLPENLGRLQSLEILYVKDF------------------DSMNCQFPSLSGLCSL 1231

Query: 731  RKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQ 790
            R L L +C L E  +PS I +L SL+ L L  N F S+P  I+ L KL+ + L  CK LQ
Sbjct: 1232 RILRLINCGLRE--IPSGICHLTSLQCLVLMGNQFSSIPDGISQLHKLIVLNLSHCKLLQ 1289

Query: 791  SLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYL 850
             +P+ P N+R +  + C SL          K  S++              L     +  +
Sbjct: 1290 HIPEPPSNLRTLVAHQCTSL----------KISSSL--------------LWSPFFKSGI 1325

Query: 851  EAVSNTRQHLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
            +      + L   +P S  IPEW  +Q +GS IT+T P N Y     +G+A+C
Sbjct: 1326 QKFVPRGKVLDTFIPESNGIPEWISHQKKGSKITLTLPQNWYENDDFLGFALC 1378



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 162/325 (49%), Gaps = 52/325 (16%)

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSD-----------------------CKNL 651
           KDL EL L G++IK++    +L  KL ++NLS                        C  L
Sbjct: 592 KDLVELILRGSNIKQLWRGNKLHNKLNVINLSHSVHLTEIPDFSSVPNLEILTLKGCVKL 651

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYI 708
             LP  I   K L+TL+   C KL+  PE  G +  L ELD+SGTA+   P S+S+    
Sbjct: 652 ECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRKLRELDLSGTAIEELPSSSSFGHLK 711

Query: 709 PINLM--RKSVAL-KLPS-LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNS 764
            + ++  R    L K+P+ +  L SL  L+L+ CN+MEG +PSDI  L SLKEL L  N 
Sbjct: 712 ALKILSFRGCSKLNKIPTDVCCLSSLEVLDLSYCNIMEGGIPSDICRLSSLKELNLKSND 771

Query: 765 FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDS 824
           F S+P +I  LS+L  + L  C+ L+ +P+LP ++R +  +G    ++    L       
Sbjct: 772 FRSIPATINRLSRLQVLNLSHCQNLEHIPELPSSLRLLDAHGPNLTLSTASFLPF----H 827

Query: 825 TMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQH---LSVVVPG-SEIPEWFMYQNEGS 880
           +++ C +S             L +  +  +++  H   + +V+PG S +PEW M +    
Sbjct: 828 SLVNCFNS---------EIQDLNQCSQNCNDSAYHGNGICIVLPGHSGVPEWMMGRR--- 875

Query: 881 SITVTRPSNLYNKKKLVGYAICCVF 905
              +  P N +   + +G+AICCV+
Sbjct: 876 --AIELPQNWHQDNEFLGFAICCVY 898



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 509  LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSG 568
            LKSLP++I   K L+TL   G  +   FPEI+E ME L +L L G+AI+ +P SI+ L G
Sbjct: 1099 LKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAIKEIPSSIQRLRG 1158

Query: 569  LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSI 627
            L  LNL  C++L  LP ++ NL  L++L +  C +LKK PE +  ++ L  L++ D  S+
Sbjct: 1159 LQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPENLGRLQSLEILYVKDFDSM 1218

Query: 628  KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
                 S+  L  L +L L +C  L  +PS I  L SL+ L L G  +  ++P+ + Q+  
Sbjct: 1219 NCQFPSLSGLCSLRILRLINC-GLREIPSGICHLTSLQCLVLMG-NQFSSIPDGISQLHK 1276

Query: 688  LEELDIS 694
            L  L++S
Sbjct: 1277 LIVLNLS 1283



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 11/156 (7%)

Query: 457  LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI-LMKSLEKLNLKSLPT- 514
            L+ L L  C  L  +  S+     L  L +K C  L  LP  +  ++SLE L +K   + 
Sbjct: 1159 LQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPENLGRLQSLEILYVKDFDSM 1218

Query: 515  -----TISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGL 569
                 ++SGL  L  L +  +   RE P  + H+  L  L L G     +P  I  L  L
Sbjct: 1219 NCQFPSLSGLCSLRILRLI-NCGLREIPSGICHLTSLQCLVLMGNQFSSIPDGISQLHKL 1277

Query: 570  VLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
            ++LNL +C+ L+ +P   SN   LR+L    C+ LK
Sbjct: 1278 IVLNLSHCKLLQHIPEPPSN---LRTLVAHQCTSLK 1310


>gi|225460157|ref|XP_002276248.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1253

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 231/580 (39%), Positives = 350/580 (60%), Gaps = 36/580 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DSR  ++  L+   ++DVR+IGI GM G+GKTT+A  +++   ++FE   F +NV    
Sbjct: 193 IDSRLCEIEPLLCLKAADVRIIGIWGMSGIGKTTLAGAIFERFRNQFEGCVFFENVGTEL 252

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            + G+  LQ +LLS++L L + S+     G   + + L  KKVL+V+D+V D   ++ +A
Sbjct: 253 EREGIEGLQEKLLSKILGLKNLSL----TGRPSIKAALGSKKVLIVLDNVKDQMIIEKIA 308

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
             R+WFG GSRIIIT+ ++++L+TH V E+Y+    + DEA++LF+  AFK   P ++ V
Sbjct: 309 KKRDWFGVGSRIIITTTNKNVLRTHEVKEIYEVKKFDGDEAMKLFSRYAFKQDHPRKDFV 368

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS  II    GLPLA+++LG  L  +S  EW S L++L  +    I + LQ+S++ L +
Sbjct: 369 ELSKSIIACTHGLPLAIKLLGDLLFEKSKHEWESKLDKLNKDLKLGI-NCLQMSYNELND 427

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            E+ +FLDIACFFKG D DYV   L+     P+ GI  L++K LIT+  N L MHDLLQE
Sbjct: 428 DEQCLFLDIACFFKGEDIDYVAKILDNHNRCPIDGIHALVDKSLITISGNKLQMHDLLQE 487

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G+++V ++S +E GKR+RLWK E++  VL  + GTE VEGI LD  H + ++       
Sbjct: 488 MGREVVCQKS-QEPGKRTRLWKHEDISLVLKNNKGTEEVEGISLDLSHVKEKLRF--ETP 544

Query: 361 AFSKMTNLRLLKI-----------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMD 409
           AF++M  L+LLK+           CN+    G ++  + LR L   GY LK LP++   +
Sbjct: 545 AFARMNKLKLLKVYNSGGASKKGNCNVHFSQGFKFHYDELRYLHLHGYNLKSLPNDFNAE 604

Query: 410 KTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLY 469
             + + M +S + +LWKG K ++KLK + LSHS  L   P+F+G  NLE+LIL+GC  L 
Sbjct: 605 NLVHLSMPHSYVQQLWKGSKGMEKLKSIDLSHSTRLTETPNFSGVVNLEQLILQGCISLR 664

Query: 470 EIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG 529
           ++H S+ + NKL +LN++DC                   LKSL  +I  L  L TL VSG
Sbjct: 665 KLHTSIGVLNKLKLLNLRDCKM-----------------LKSLSESICCLSSLQTLVVSG 707

Query: 530 DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGL 569
             K ++FPE +  +E L EL+ + TA+  +P S+  L  L
Sbjct: 708 CCKLKKFPENLGKLEMLKELYADETAVTEVPSSMGFLKNL 747



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 172/551 (31%), Positives = 263/551 (47%), Gaps = 76/551 (13%)

Query: 542  HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
            H + L  LHL G  ++ LP        LV L++ +    ++   +   ++ L+S+ LS  
Sbjct: 580  HYDELRYLHLHGYNLKSLPNDFNA-ENLVHLSMPHSYVQQLWKGS-KGMEKLKSIDLSHS 637

Query: 602  SKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
            ++L + P     + +L +L L G  S++++ +SI +L KL+LLNL DCK L  L  SI  
Sbjct: 638  TRLTETPNF-SGVVNLEQLILQGCISLRKLHTSIGVLNKLKLLNLRDCKMLKSLSESICC 696

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI------------ 708
            L SL+TL +SGC KL+  PE LG++E L+EL    TAV    S   ++            
Sbjct: 697  LSSLQTLVVSGCCKLKKFPENLGKLEMLKELYADETAVTEVPSSMGFLKNLETFSFQGRK 756

Query: 709  -----PINLMR---KSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
                 P +++R    S+   LP +SGL SL KLNL+D N+++GA  SD+G L SLK L L
Sbjct: 757  GPSPAPSSMLRTRSDSMGFILPHVSGLSSLLKLNLSDRNILDGARLSDLGLLSSLKILIL 816

Query: 761  SKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLC 820
            + N+F +LP  I+ L  L  +E ++C+RLQ+LP+LP +I  +  + C SL  +       
Sbjct: 817  NGNNFDTLPGCISQLFLLGWLESKNCQRLQALPELPSSIGYIGAHNCTSLEAV------- 869

Query: 821  KSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQH--------LSVVVPGSEIPEW 872
             S+ ++ +           SL  + L+E+    S              +VV PGS IP+W
Sbjct: 870  -SNQSLFS-----------SLMIAKLKEHPRRTSQLEHDSEGQLSAAFTVVAPGSGIPDW 917

Query: 873  FMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFH--VLKNSRGNNCFGSYPT-HQLNCHI 929
              YQ+ G  +TV  P N +     + +A C V    VL  +   N   +  T        
Sbjct: 918  ISYQSSGREVTVKLPPNWFTTY-FLAFASCVVTSPSVLPYADSINELCTKCTVFYSTSSC 976

Query: 930  GHGIYGIGFRDKF-GQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLG 988
                Y +  R    G+  SDH+WL Y        +R P+  N    E  H+  SFE  LG
Sbjct: 977  VSSSYDVFPRSHAEGRMESDHVWLRY--------VRFPISINCH--EVTHIKFSFEMILG 1026

Query: 989  QGLEVKMCGLHPVYMDEVEELDQTTNQP------SRFTVYNLNEFDQHFVGSKMIVATTS 1042
                +K CG+  VY ++    D+  N P      S F+  NL   D    GS       S
Sbjct: 1027 TSSAIKRCGVGLVYGND----DENYNNPGMIQFNSIFSPPNLEIHDGEPSGSGCSNVDGS 1082

Query: 1043 KRSLTEYFGAE 1053
            +   ++Y+ A+
Sbjct: 1083 ESDDSDYYTAD 1093


>gi|297741031|emb|CBI31343.3| unnamed protein product [Vitis vinifera]
          Length = 1239

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 231/580 (39%), Positives = 350/580 (60%), Gaps = 36/580 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DSR  ++  L+   ++DVR+IGI GM G+GKTT+A  +++   ++FE   F +NV    
Sbjct: 193 IDSRLCEIEPLLCLKAADVRIIGIWGMSGIGKTTLAGAIFERFRNQFEGCVFFENVGTEL 252

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            + G+  LQ +LLS++L L + S+     G   + + L  KKVL+V+D+V D   ++ +A
Sbjct: 253 EREGIEGLQEKLLSKILGLKNLSL----TGRPSIKAALGSKKVLIVLDNVKDQMIIEKIA 308

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
             R+WFG GSRIIIT+ ++++L+TH V E+Y+    + DEA++LF+  AFK   P ++ V
Sbjct: 309 KKRDWFGVGSRIIITTTNKNVLRTHEVKEIYEVKKFDGDEAMKLFSRYAFKQDHPRKDFV 368

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS  II    GLPLA+++LG  L  +S  EW S L++L  +    I + LQ+S++ L +
Sbjct: 369 ELSKSIIACTHGLPLAIKLLGDLLFEKSKHEWESKLDKLNKDLKLGI-NCLQMSYNELND 427

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            E+ +FLDIACFFKG D DYV   L+     P+ GI  L++K LIT+  N L MHDLLQE
Sbjct: 428 DEQCLFLDIACFFKGEDIDYVAKILDNHNRCPIDGIHALVDKSLITISGNKLQMHDLLQE 487

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G+++V ++S +E GKR+RLWK E++  VL  + GTE VEGI LD  H + ++       
Sbjct: 488 MGREVVCQKS-QEPGKRTRLWKHEDISLVLKNNKGTEEVEGISLDLSHVKEKLRF--ETP 544

Query: 361 AFSKMTNLRLLKI-----------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMD 409
           AF++M  L+LLK+           CN+    G ++  + LR L   GY LK LP++   +
Sbjct: 545 AFARMNKLKLLKVYNSGGASKKGNCNVHFSQGFKFHYDELRYLHLHGYNLKSLPNDFNAE 604

Query: 410 KTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLY 469
             + + M +S + +LWKG K ++KLK + LSHS  L   P+F+G  NLE+LIL+GC  L 
Sbjct: 605 NLVHLSMPHSYVQQLWKGSKGMEKLKSIDLSHSTRLTETPNFSGVVNLEQLILQGCISLR 664

Query: 470 EIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG 529
           ++H S+ + NKL +LN++DC                   LKSL  +I  L  L TL VSG
Sbjct: 665 KLHTSIGVLNKLKLLNLRDCKM-----------------LKSLSESICCLSSLQTLVVSG 707

Query: 530 DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGL 569
             K ++FPE +  +E L EL+ + TA+  +P S+  L  L
Sbjct: 708 CCKLKKFPENLGKLEMLKELYADETAVTEVPSSMGFLKNL 747



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 172/551 (31%), Positives = 263/551 (47%), Gaps = 76/551 (13%)

Query: 542  HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
            H + L  LHL G  ++ LP        LV L++ +    ++   +   ++ L+S+ LS  
Sbjct: 580  HYDELRYLHLHGYNLKSLPNDFNA-ENLVHLSMPHSYVQQLWKGS-KGMEKLKSIDLSHS 637

Query: 602  SKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
            ++L + P     + +L +L L G  S++++ +SI +L KL+LLNL DCK L  L  SI  
Sbjct: 638  TRLTETPNF-SGVVNLEQLILQGCISLRKLHTSIGVLNKLKLLNLRDCKMLKSLSESICC 696

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI------------ 708
            L SL+TL +SGC KL+  PE LG++E L+EL    TAV    S   ++            
Sbjct: 697  LSSLQTLVVSGCCKLKKFPENLGKLEMLKELYADETAVTEVPSSMGFLKNLETFSFQGRK 756

Query: 709  -----PINLMR---KSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
                 P +++R    S+   LP +SGL SL KLNL+D N+++GA  SD+G L SLK L L
Sbjct: 757  GPSPAPSSMLRTRSDSMGFILPHVSGLSSLLKLNLSDRNILDGARLSDLGLLSSLKILIL 816

Query: 761  SKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLC 820
            + N+F +LP  I+ L  L  +E ++C+RLQ+LP+LP +I  +  + C SL  +       
Sbjct: 817  NGNNFDTLPGCISQLFLLGWLESKNCQRLQALPELPSSIGYIGAHNCTSLEAV------- 869

Query: 821  KSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQH--------LSVVVPGSEIPEW 872
             S+ ++ +           SL  + L+E+    S              +VV PGS IP+W
Sbjct: 870  -SNQSLFS-----------SLMIAKLKEHPRRTSQLEHDSEGQLSAAFTVVAPGSGIPDW 917

Query: 873  FMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFH--VLKNSRGNNCFGSYPT-HQLNCHI 929
              YQ+ G  +TV  P N +     + +A C V    VL  +   N   +  T        
Sbjct: 918  ISYQSSGREVTVKLPPNWFTTY-FLAFASCVVTSPSVLPYADSINELCTKCTVFYSTSSC 976

Query: 930  GHGIYGIGFRDKF-GQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLG 988
                Y +  R    G+  SDH+WL Y        +R P+  N    E  H+  SFE  LG
Sbjct: 977  VSSSYDVFPRSHAEGRMESDHVWLRY--------VRFPISINCH--EVTHIKFSFEMILG 1026

Query: 989  QGLEVKMCGLHPVYMDEVEELDQTTNQP------SRFTVYNLNEFDQHFVGSKMIVATTS 1042
                +K CG+  VY ++    D+  N P      S F+  NL   D    GS       S
Sbjct: 1027 TSSAIKRCGVGLVYGND----DENYNNPGMIQFNSIFSPPNLEIHDGEPSGSGCSNVDGS 1082

Query: 1043 KRSLTEYFGAE 1053
            +   ++Y+ A+
Sbjct: 1083 ESDDSDYYTAD 1093


>gi|449483059|ref|XP_004156482.1| PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like,
           partial [Cucumis sativus]
          Length = 786

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 237/580 (40%), Positives = 342/580 (58%), Gaps = 27/580 (4%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVREISSK-GGLVSLQRQLLSQLLKLADNSIWNVFDG 90
           KTT+A+ +Y+ I+++FE   FL NVRE S +  GLV LQ +LL ++LK  D  I N+ +G
Sbjct: 232 KTTLAKALYNKIANQFEGFCFLSNVRETSKQFNGLVQLQEKLLYEILKF-DLKIGNLDEG 290

Query: 91  IDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEV 150
           I+++ SRL+ KKVL+V+DDV ++KQL++L G R+WFG GS+II+T+R+ HLL +H  DE 
Sbjct: 291 INIIRSRLRSKKVLIVLDDVDNLKQLEALVGERDWFGHGSKIIVTTRNSHLLSSHEFDEK 350

Query: 151 YKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVD 210
           Y    L++  +L+LF+  AFK   P    + LS R I Y  G PLAL VLGSFL  R   
Sbjct: 351 YGVRELSHGHSLELFSWHAFKKSHPSSNYLDLSKRAINYCKGHPLALVVLGSFLCTRDQI 410

Query: 211 EWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGF 270
           +WR+ L+  E     +I  I+QISFDGL+E  K+IFLDI+C F G   +YV + L  C F
Sbjct: 411 KWRTILDEFENSLSEDIEHIIQISFDGLEEKIKEIFLDISCLFVGEKVNYVKSVLNTCHF 470

Query: 271 HPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVL 330
               GI VL++  LITV N  + MHDL++++GQ+IV  +S E  GKRSRLW   +V  V 
Sbjct: 471 SLDFGIIVLMDLSLITVENEEVQMHDLIRQMGQKIVNGESFEP-GKRSRLWLVHDVLKVF 529

Query: 331 TESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLR 390
            +++GT  V+ I LD     N   L   ++AF  M NLRLL + N +    +EYL + L+
Sbjct: 530 ADNSGTIAVKAIKLD---LSNPTRLDVDSRAFRNMKNLRLLIVRNARFSTNVEYLPDNLK 586

Query: 391 LLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD 450
            + W G+  +FLP +      + + + +S I  L KG K   +LK + LS+S  L ++PD
Sbjct: 587 WIKWHGFSHRFLPLSFLKKNLVGLDLRHSLIRNLGKGFKDCKRLKHVDLSYSSLLEKIPD 646

Query: 451 FTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK 510
           F    NLE+L L  CT L  I  S++   KL+ L++  C++LI LP  +++KSL+ L L 
Sbjct: 647 FPATSNLEELYLNNCTNLRTIPKSVVSLGKLLTLDLDHCSNLIKLPSYLMLKSLKVLKLA 706

Query: 511 SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHL-EGTAIRGLPLSIELLSGL 569
                                K  + P+      +L  L+L E T +R +  SI  LS L
Sbjct: 707 YCK------------------KLEKLPDF-STASNLEXLYLKECTNLRMIHDSIGSLSKL 747

Query: 570 VLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPE 609
           V L+L  C +LE LP  ++ LK L  L L+ C KL++ P+
Sbjct: 748 VTLDLGKCSNLEKLPSYLT-LKSLEYLNLAHCKKLEEIPD 786



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 107/193 (55%), Gaps = 11/193 (5%)

Query: 495 LPGKILMKSLEKLNLK-----SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSEL 549
           LP   L K+L  L+L+     +L       K L  +D+S      + P+      +L EL
Sbjct: 598 LPLSFLKKNLVGLDLRHSLIRNLGKGFKDCKRLKHVDLSYSSLLEKIPDF-PATSNLEEL 656

Query: 550 HLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
           +L   T +R +P S+  L  L+ L+L +C +L  LP  +  LK L+ LKL+ C KL+K P
Sbjct: 657 YLNNCTNLRTIPKSVVSLGKLLTLDLDHCSNLIKLPSYLM-LKSLKVLKLAYCKKLEKLP 715

Query: 609 EIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL 667
           +   +  +L  L+L + T+++ +  SI  L+KL  L+L  C NL +LPS  + LKSL+ L
Sbjct: 716 DF-STASNLEXLYLKECTNLRMIHDSIGSLSKLVTLDLGKCSNLEKLPS-YLTLKSLEYL 773

Query: 668 NLSGCFKLENVPE 680
           NL+ C KLE +P+
Sbjct: 774 NLAHCKKLEEIPD 786



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 121/261 (46%), Gaps = 52/261 (19%)

Query: 536 FPEIVEHM-EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
           F   VE++ ++L  +   G + R LPLS  L   LV L+L++   +  L     + K L+
Sbjct: 574 FSTNVEYLPDNLKWIKWHGFSHRFLPLSF-LKKNLVGLDLRHSL-IRNLGKGFKDCKRLK 631

Query: 595 SLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVR 653
            + LS  S L+K P+   +  +L EL+L+  T+++ +P S+  L KL  L+L  C NL++
Sbjct: 632 HVDLSYSSLLEKIPDF-PATSNLEELYLNNCTNLRTIPKSVVSLGKLLTLDLDHCSNLIK 690

Query: 654 LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLM 713
           LPS ++ LKSLK L L+ C KLE                                     
Sbjct: 691 LPSYLM-LKSLKVLKLAYCKKLE------------------------------------- 712

Query: 714 RKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSI 772
                 KLP  S   +L  L L +C  +   +   IG+L  L  L L K ++   LP+ +
Sbjct: 713 ------KLPDFSTASNLEXLYLKECTNLR-MIHDSIGSLSKLVTLDLGKCSNLEKLPSYL 765

Query: 773 THLSKLLNIELEDCKRLQSLP 793
           T L  L  + L  CK+L+ +P
Sbjct: 766 T-LKSLEYLNLAHCKKLEEIP 785


>gi|356573485|ref|XP_003554889.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1134

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 275/698 (39%), Positives = 400/698 (57%), Gaps = 65/698 (9%)

Query: 11  LMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQ 69
           L+D G++D V MIGI G+GG+GKTT+A  VY+ ++  F+ S FL+NVRE S K GL  LQ
Sbjct: 269 LLDVGANDGVHMIGIHGIGGIGKTTLALAVYNYVADHFDGSCFLENVRENSDKHGLQHLQ 328

Query: 70  RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG 129
             +LS+L+K    +I  V  GI M+  RLQRKKVLL++DDV   +QLQ++ G  +WFGSG
Sbjct: 329 SIILSELVKENKMNIATVKQGISMIQHRLQRKKVLLIVDDVDKPEQLQAIVGRPDWFGSG 388

Query: 130 SRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRY 189
           SRIIIT+RDE LL +H V   Y+ + LN ++ALQL   +AFK  +      ++  R++ Y
Sbjct: 389 SRIIITTRDEKLLASHEVRRTYEVNELNRNDALQLLTWEAFKMQKVDPSYEEMLNRVVTY 448

Query: 190 AGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDI 249
           A GLPLAL+V+GS L G+S+ EW+S + + +  P ++IL IL++SFD L+E EK +FLDI
Sbjct: 449 ASGLPLALKVIGSNLFGKSIQEWKSAINQYQRIPNNQILKILKVSFDALEEEEKSVFLDI 508

Query: 250 ACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCL--ITVHNNTLWMHDLLQELGQQIV 306
           AC FKG + + V + L    G      I VLI+K L  ++VH   + +HDL++++G++IV
Sbjct: 509 ACCFKGCELEEVEDILHAHYGDCMKYHIGVLIDKSLLKLSVHGTMVTLHDLIEDMGREIV 568

Query: 307 QRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMT 366
           +++SP++ GKRSRLW  E++  VL ++TGT  +E I L+    + E  +  + KAF KM 
Sbjct: 569 RQESPKDPGKRSRLWFHEDIIQVLEDNTGTSEIEIICLNFPLLDKEDIVEWNRKAFKKMK 628

Query: 367 NLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI----YMCYSRIG 422
           NL+ L I +     G  YL N LR+L W  YP   LPS+ +  K + I    + C++ + 
Sbjct: 629 NLKTLIIKSGHFCKGPRYLPNSLRVLEWWRYPSHDLPSDFR-SKKLGICKLPHCCFTSL- 686

Query: 423 ELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLI 482
           EL   +     ++V+ L   + L ++PD +G PNLEKL  + C  L  IH S+    KL 
Sbjct: 687 ELVGFLTKFMSMRVLNLDKCKCLTQIPDVSGLPNLEKLSFQHCQNLTTIHSSIGFLYKLK 746

Query: 483 ILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEH 542
           IL+   CT L++ P  I + SLEKLNL          +C S            FPEI+  
Sbjct: 747 ILSAFGCTKLVSFP-PIKLTSLEKLNLS---------RCHS---------LESFPEILGK 787

Query: 543 MEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL---KLS 599
           ME++ EL  E T+I+ LP SI  L+ L  L L NC  ++ LP ++  +  L  L   K  
Sbjct: 788 MENIRELQCEYTSIKELPSSIHNLTRLQELQLANCGVVQ-LPSSIVMMPELTELIGWKWK 846

Query: 600 GCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELL-------------------TKL 640
           G   LK+        ++  E F  G+SI  V S +ELL                     +
Sbjct: 847 GWQWLKQ--------EEGEEKF--GSSI--VSSKVELLWASDCNLYDDFFSIGFTRFAHV 894

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
           + LNLS   N   LP  I   + L+ LN++ C  L+ +
Sbjct: 895 KDLNLSK-NNFTMLPECIKEFQFLRKLNVNDCKHLQEI 931



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 187/463 (40%), Gaps = 103/463 (22%)

Query: 579  SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELL 637
            SLE++   ++    +R L L  C  L + P+ V  + +L +L F    ++  + SSI  L
Sbjct: 685  SLELVGF-LTKFMSMRVLNLDKCKCLTQIPD-VSGLPNLEKLSFQHCQNLTTIHSSIGFL 742

Query: 638  TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA 697
             KL++L+   C  LV  P   I L SL+ LNLS C  LE+ PE LG++E++ EL    T+
Sbjct: 743  YKLKILSAFGCTKLVSFPP--IKLTSLEKLNLSRCHSLESFPEILGKMENIRELQCEYTS 800

Query: 698  VPHSTSWYSYIPINLMR--------------KSVALKLPSLSGLCSLR------------ 731
            +    S       NL R               S  + +P L+ L   +            
Sbjct: 801  IKELPSSIH----NLTRLQELQLANCGVVQLPSSIVMMPELTELIGWKWKGWQWLKQEEG 856

Query: 732  -----------KLNL---TDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSK 777
                       K+ L   +DCNL +            +K+L LSKN+F  LP  I     
Sbjct: 857  EEKFGSSIVSSKVELLWASDCNLYDDFFSIGFTRFAHVKDLNLSKNNFTMLPECIKEFQF 916

Query: 778  LLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLG 837
            L  + + DCK LQ +  +PP+++      C SL +         S ++M           
Sbjct: 917  LRKLNVNDCKHLQEIRGIPPSLKHFLATNCKSLTS---------SSTSM----------- 956

Query: 838  NKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLV 897
                    L + L     T+ +L    PG  IPEWF +Q+ G SI+       + + K  
Sbjct: 957  -------FLNQELHETGKTQFYL----PGERIPEWFDHQSRGPSIS------FWFRNKFP 999

Query: 898  GYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSR 957
            G  +C V   + +  G         +      G G + +G          DH +L  L  
Sbjct: 1000 GKVLCLVIGPMDDDSG-MLISKVIINGNKYFRGSGYFMMGM---------DHTYLFDLQI 1049

Query: 958  QTCYD-IRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLH 999
                D + +PLE+     E NH  V++E  L +    K CG+H
Sbjct: 1050 MEFEDNLYVPLEN-----EWNHAEVTYEG-LEETSTPKECGIH 1086


>gi|317415955|emb|CAR94520.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 806

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 250/626 (39%), Positives = 363/626 (57%), Gaps = 63/626 (10%)

Query: 15  GSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLS 74
           G+ +VR+IGICGM G+GK+TIA+ +   I ++F+A  F+  V EIS K  L  ++ QL  
Sbjct: 218 GTEEVRVIGICGMPGIGKSTIAKALSQRIRNQFDAFSFISKVGEISRKKSLFHIKEQLCD 277

Query: 75  QLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGN------REWFGS 128
            LL +   +  NV    D++  RL  K+VL+V+D+V +++Q+ ++AGN         FG 
Sbjct: 278 HLLNMQ-VTTKNV---DDVIRKRLCNKRVLIVLDNVEELEQIDAVAGNDGADELSSRFGK 333

Query: 129 GSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIR 188
           GS+IIIT+  E LL  +   ++Y    L  DE+L LF  KAFK   P+    +L    + 
Sbjct: 334 GSKIIITTACERLLINYN-PKIYTIEKLTQDESLLLFCRKAFKKDHPMDGYEKLCYEFLD 392

Query: 189 YAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPS---EILDILQISFDGLQELEKK- 244
           Y  GLPLALEV G+ L  RSV++W S L  L+ +  S   +I++ L+ SFDGL+  E++ 
Sbjct: 393 YVDGLPLALEVFGNSLLNRSVEDWSSRLASLKDDNYSGKNKIVNYLKESFDGLENQEQRE 452

Query: 245 IFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQ 304
           IFLDIACFFKG D   V N  E CG++P I + +L EK L+++    LWMH+LLQ++G++
Sbjct: 453 IFLDIACFFKGEDACRVENIFESCGYYPGINLNILCEKYLVSIVGGKLWMHNLLQQMGRE 512

Query: 305 IVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSK 364
           +V+ +S +E G RSRLW   E  HVL  + GT+ V+GI L +  H ++V+L      FS 
Sbjct: 513 VVRGESKKE-GARSRLWLHTEAIHVLKGNKGTDAVQGIFL-SLPHPDKVHL--KKDPFSN 568

Query: 365 MTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGEL 424
           M NLRLLKI N++    LEYLS+ L  L W  YPLK LPS+ + DK +E+ +  S I +L
Sbjct: 569 MDNLRLLKIYNVEFSGCLEYLSDELSFLEWHKYPLKSLPSSFEPDKLVELNLSESEIEQL 628

Query: 425 WKGIKH-LDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLII 483
           W+ I+  L+KL ++ LS  + LI++PDF   PNLE+LIL+GCT L E+           I
Sbjct: 629 WEEIERPLEKLLILNLSDCQKLIKIPDFDKVPNLEQLILKGCTSLSEVPD---------I 679

Query: 484 LNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHM 543
           +N++  T+ I L G      LEK     LP     +K L  L + G     E P  +EH+
Sbjct: 680 INLRSLTNFI-LSG---CSKLEK-----LPEIGEDMKQLRKLHLDG-TAIEELPTSIEHL 729

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP-VTVSNLKCLRSLKLSGCS 602
             L+                       LL+L++C++L  LP V   +L  L+ L LSGCS
Sbjct: 730 SGLT-----------------------LLDLRDCKNLLSLPDVLCDSLTSLQVLNLSGCS 766

Query: 603 KLKKFPEIVRSMKDLSELFLDGTSIK 628
            L K P+ + S++ L EL   GT+I+
Sbjct: 767 NLDKLPDNLGSLECLQELDASGTAIR 792



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 87/195 (44%), Positives = 122/195 (62%), Gaps = 5/195 (2%)

Query: 506 KLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHL-EGTAIRGLPLSIE 564
           K  LKSLP++    K L  L++S     + + EI   +E L  L+L +   +  +P   +
Sbjct: 600 KYPLKSLPSSFEPDK-LVELNLSESEIEQLWEEIERPLEKLLILNLSDCQKLIKIP-DFD 657

Query: 565 LLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG 624
            +  L  L LK C SL  +P  + NL+ L +  LSGCSKL+K PEI   MK L +L LDG
Sbjct: 658 KVPNLEQLILKGCTSLSEVP-DIINLRSLTNFILSGCSKLEKLPEIGEDMKQLRKLHLDG 716

Query: 625 TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSII-ALKSLKTLNLSGCFKLENVPETLG 683
           T+I+E+P+SIE L+ L LL+L DCKNL+ LP  +  +L SL+ LNLSGC  L+ +P+ LG
Sbjct: 717 TAIEELPTSIEHLSGLTLLDLRDCKNLLSLPDVLCDSLTSLQVLNLSGCSNLDKLPDNLG 776

Query: 684 QIESLEELDISGTAV 698
            +E L+ELD SGTA+
Sbjct: 777 SLECLQELDASGTAI 791



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 113/256 (44%), Gaps = 59/256 (23%)

Query: 573 NLKNCRSLEILPVTVSNLKCLRSL--KLSGCS----KLKKFPEIVRSMKDLSELFLDGTS 626
           N+ N R L+I  V  S   CL  L  +LS        LK  P      K L EL L  + 
Sbjct: 568 NMDNLRLLKIYNVEFSG--CLEYLSDELSFLEWHKYPLKSLPSSFEPDK-LVELNLSESE 624

Query: 627 IKEVPSSIEL-LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI 685
           I+++   IE  L KL +LNLSDC+ L+++P     + +L+ L L GC  L  VP+ +   
Sbjct: 625 IEQLWEEIERPLEKLLILNLSDCQKLIKIPD-FDKVPNLEQLILKGCTSLSEVPDIIN-- 681

Query: 686 ESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGAL 745
                                                    L SL    L+ C+ +E  L
Sbjct: 682 -----------------------------------------LRSLTNFILSGCSKLE-KL 699

Query: 746 PSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQL----PPNIRQ 801
           P    ++  L++L+L   +   LPTSI HLS L  ++L DCK L SLP +      +++ 
Sbjct: 700 PEIGEDMKQLRKLHLDGTAIEELPTSIEHLSGLTLLDLRDCKNLLSLPDVLCDSLTSLQV 759

Query: 802 VRVNGCASLVTLLDAL 817
           + ++GC++L  L D L
Sbjct: 760 LNLSGCSNLDKLPDNL 775


>gi|224145367|ref|XP_002325616.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862491|gb|EEE99997.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 889

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 287/797 (36%), Positives = 428/797 (53%), Gaps = 80/797 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D R  ++  L+D  S DV ++GI GMGG+GKTTIA+VV   +   FE   F  N R+ S
Sbjct: 13  IDVRVSEVESLLDMESPDVLIVGIWGMGGIGKTTIAQVVCSKVRSRFEGI-FFANFRQQS 71

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS-- 118
                   +      L  +   S  + F     + +RL+R KV +V+DDV D+ +L+   
Sbjct: 72  DLLRRFLKRLLGQETLNTIGSLSFRDTF-----VRNRLRRIKVFIVLDDVDDLMRLEEWR 126

Query: 119 --LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
             L G    FG GS+++ITSRD+ +LK + VDE Y+  GLN ++A+QLF+ KA K Y P 
Sbjct: 127 DLLDGRNSSFGPGSKVLITSRDKQVLK-NVVDETYEVEGLNDEDAIQLFSSKALKNYIPT 185

Query: 177 QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
            +   L ++I R+  G PLAL+VLGS L G+S++EWRS L +L  +P  +I   L+IS+D
Sbjct: 186 IDHRHLISQIARHVQGNPLALKVLGSSLYGKSIEEWRSALYKLTQDP--QIERALRISYD 243

Query: 237 GLQELEKKIFLDIACFFKGNDRDYVTNFLEGC-GFHPVIGIRVLIEKCLITVHNNTLWMH 295
           GL   +K IFLDIA FF G + D  T  L+G  G   +I I  LI+KCLIT  +N+L  H
Sbjct: 244 GLDSEQKSIFLDIAHFFIGWEPDEATRILDGLYGRSVIIDISTLIDKCLITTSHNSLETH 303

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DLL+++   IV+ +S +  G+RSRL    +V  VL E+ GT+ ++GI L+       + L
Sbjct: 304 DLLRQMAINIVRAES-DFPGERSRLCHRPDVVQVLEENKGTQKIKGISLEMSVFPRHILL 362

Query: 356 CASAKAFSKMTNLRLLKIC--------NLQLP-NGLEYLSNRLRLLGWRGYPLKFLPSNL 406
              + AF+ M  LR L I          + LP  GLEY+ N LR L W G+P K LP + 
Sbjct: 363 --KSDAFAMMDGLRFLNIYISRHSQEDKMHLPPTGLEYIPNELRYLRWYGFPSKSLPPSF 420

Query: 407 QMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
           +    +E+++  S++ +LW G+K +  L+ + LS+S  L  +PD + A NLE L L+ C 
Sbjct: 421 RAVHLVELHLRKSKLVKLWTGVKDVGNLRKIDLSYSPYLTELPDLSMAKNLECLRLKDCP 480

Query: 467 RLYEIHPSLLLHNKLIILNMKDCTSLITLP---GKIL---------------MKS----- 503
            L E+  SL   +KL  +++ DC +L + P    K+L               M S     
Sbjct: 481 SLTEVPSSLQYLDKLEEIDLSDCNNLRSFPMLDSKVLSFLSISRCLYVTTCPMISQNLVW 540

Query: 504 --LEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPL 561
             LE+ ++K +P +++G   L  L++ G  K  +FPE +E +E   EL+L GTAI+ +P 
Sbjct: 541 LRLEQTSIKEVPQSVTG--NLQLLNLDGCSKMTKFPENLEDIE---ELNLRGTAIKEVPS 595

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI-VRSMKDLSEL 620
           SI+ L+ L  LN+  C  LE  P    ++K L  L LS  + +K+ P I  + M  L  L
Sbjct: 596 SIQFLTRLRHLNMSGCSKLESFPEITVHMKSLEHLILSK-TGIKEIPLISFKHMISLISL 654

Query: 621 FLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
            LDGT IK +P   EL   L  LN  DC +L  + S+I   +    L+ + CFKL+  P 
Sbjct: 655 DLDGTPIKALP---ELPPSLRYLNTHDCASLETVTSTINIGRLRLGLDFTNCFKLDQKPL 711

Query: 681 TLG---QIESLEELD-------ISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSL 730
                 +I+S EE+        + G+ +P    W+    I     S+ ++LPS    C  
Sbjct: 712 VAAMHLKIQSGEEIPDGSIQMVLPGSEIPE---WFGDKGIG---SSLTIQLPS---NCHQ 762

Query: 731 RKLNLTDCNLMEGALPS 747
           +   +  C +    LPS
Sbjct: 763 QLKGIAFCLVFLAPLPS 779



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 197/430 (45%), Gaps = 85/430 (19%)

Query: 546 LSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
           L  L   G   + LP S   +  LV L+L+  + ++ L   V ++  LR + LS    L 
Sbjct: 403 LRYLRWYGFPSKSLPPSFRAVH-LVELHLRKSKLVK-LWTGVKDVGNLRKIDLSYSPYLT 460

Query: 606 KFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP---SSIIAL 661
           + P++  + K+L  L L D  S+ EVPSS++ L KLE ++LSDC NL   P   S +++ 
Sbjct: 461 ELPDLSMA-KNLECLRLKDCPSLTEVPSSLQYLDKLEEIDLSDCNNLRSFPMLDSKVLSF 519

Query: 662 KS-------------------------------------LKTLNLSGCFKLENVPETLGQ 684
            S                                     L+ LNL GC K+   PE L  
Sbjct: 520 LSISRCLYVTTCPMISQNLVWLRLEQTSIKEVPQSVTGNLQLLNLDGCSKMTKFPENL-- 577

Query: 685 IESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGA 744
            E +EEL++ GTA+    S                   S+  L  LR LN++ C+ +E +
Sbjct: 578 -EDIEELNLRGTAIKEVPS-------------------SIQFLTRLRHLNMSGCSKLE-S 616

Query: 745 LPSDIGNLCSLKELYLSKNSFVSLP-TSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR 803
            P    ++ SL+ L LSK     +P  S  H+  L++++L D   +++LP+LPP++R + 
Sbjct: 617 FPEITVHMKSLEHLILSKTGIKEIPLISFKHMISLISLDL-DGTPIKALPELPPSLRYLN 675

Query: 804 VNGCASLVTLLDALKLCKS----DSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQH 859
            + CASL T+   + + +     D T    LD   L+    L      E  +        
Sbjct: 676 THDCASLETVTSTINIGRLRLGLDFTNCFKLDQKPLVAAMHLKIQSGEEIPDG------S 729

Query: 860 LSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGS 919
           + +V+PGSEIPEWF  +  GSS+T+  PSN +  ++L G A C VF     S G +    
Sbjct: 730 IQMVLPGSEIPEWFGDKGIGSSLTIQLPSNCH--QQLKGIAFCLVFLAPLPSHGFSFSDV 787

Query: 920 YPTHQLNCHI 929
           Y     +CH+
Sbjct: 788 Y----FDCHV 793


>gi|449526134|ref|XP_004170069.1| PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like
            [Cucumis sativus]
          Length = 1195

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 332/971 (34%), Positives = 503/971 (51%), Gaps = 125/971 (12%)

Query: 1    MDSRCEKLRFLMDSGSSD--VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE 58
            +DS+ + +  L   G SD  V M+GI GMGG+GKTT+A+ +Y+ I+++FEA  FL NVRE
Sbjct: 202  IDSQLKAIEELASHGVSDNGVNMVGIHGMGGIGKTTLAKALYNKITYQFEACCFLSNVRE 261

Query: 59   ISSK-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
             S +  GLV LQ +LL+++ K  +  + NV  G++++  RL  +KVL+V+DDV    QL 
Sbjct: 262  TSEQFNGLVQLQEKLLNEIFKDNNLKVDNVDKGMNIIKDRLCSRKVLMVLDDVDKDDQLD 321

Query: 118  SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
            +L G R+ FG GS+II+T+RD HLL+T+  D+++    L+ D++L+LF   AFK   P +
Sbjct: 322  ALVGGRDXFGRGSKIIVTTRDRHLLETYSFDKIHPIQLLDCDKSLELFCWHAFKQSHPSR 381

Query: 178  ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
               +L   ++RY  GLPLAL +LGS L  R    W+S L+ L+  P   I  + QISF  
Sbjct: 382  NYSEL-PELVRYCNGLPLALVILGSLLCKRDQIIWKSKLDELKNFPEPGIEAVFQISFKR 440

Query: 238  LQELE--KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMH 295
            L E    K+IFLDI CFF G D  Y  N L+ C  +    I +L++  L+TV +  + MH
Sbjct: 441  LPENPPVKEIFLDICCFFVGEDVSYSKNVLKACDPYLESRIIILMDLSLVTVEDGKIQMH 500

Query: 296  DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
            DL++++GQ IV+R+S  +  KRSRLW  +E   +L E +GT  V+ I LD     N   L
Sbjct: 501  DLIRQMGQMIVRRKS-FKXRKRSRLWVAKEAVKMLIEKSGTHKVKAIKLD---LRNNGSL 556

Query: 356  CASAKAFSKMTNLRLLKICNLQ---------LPN--GLEYLSNRLRLLGWRGYPLKFLPS 404
               A+AF  M NLRLL + N           LPN   +EY S+ +R   W  +P+ F+ +
Sbjct: 557  IVEAEAFRNMENLRLLILQNAAKLPTNIFKYLPNIKWIEYSSSSVR---WY-FPISFVVN 612

Query: 405  NLQMDKTIEIYMCYSR--IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
               +   I          I E  K +KH+D      LS+   L   PDF+ A NLEKL L
Sbjct: 613  GGLVGLVINGVSNKHPGIIFEDCKMLKHVD------LSYWRLLEETPDFSAALNLEKLYL 666

Query: 463  EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCL 522
              C RL  IH S+   +KL+ L+++ C +L  LP   LM                 LK L
Sbjct: 667  LSCKRLKMIHGSVASLSKLVTLDLEGCENLEKLPSSFLM-----------------LKSL 709

Query: 523  STLDVSGDLKFREFPEIVEHMEHLSELHL-EGTAIRGLPLSI--ELLSGLVLLNLKNCRS 579
              L++SG +K +E P++     +L ELHL E   +R +  S     L  LV+L+L+ C+ 
Sbjct: 710  EVLNLSGCIKLKEIPDL-SASSNLKELHLRECYHLRIIHDSAVGRFLDKLVILDLEGCKI 768

Query: 580  LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF-LDGT-SIKEVPSSIELL 637
            LE LP +    + L+ L LS C  LK+  +   S+    E+F L G  S++ +  S+  L
Sbjct: 769  LERLPTSHLKFESLKVLNLSYCQNLKEITDF--SIASNLEIFDLRGCFSLRTIHKSVGSL 826

Query: 638  TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA 697
             +L  L L  C  L  LPS  + LKSL +L+L+ C+K+E +PE    ++SL E+++ GTA
Sbjct: 827  DQLIALKLDFCHQLEELPSC-LRLKSLDSLSLTNCYKIEQLPEFDENMKSLREMNLKGTA 885

Query: 698  V---PHSTSW--------YSY------IP-------------------INLMRKSVALKL 721
            +   P S  +         SY      +P                   ++++    +L  
Sbjct: 886  IRKLPTSIRYLIGLENLILSYCTNLISLPSEIHLLKSLKELDLRECSRLDMLPSGSSLNF 945

Query: 722  PSLSGLCSLRKLNLTDCNLMEGALPSDIGNLC-SLKELYLSKNSFVSLPTSITHLSKLLN 780
            P  S   +L  L+L +CN+       ++ N C +LKEL LS N F  LP S+ + + L  
Sbjct: 946  PQRSLCSNLTILDLQNCNISNSDFLENLSNFCTTLKELNLSGNKFCCLP-SLKNFTSLRL 1004

Query: 781  IELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKS 840
            +EL +CK L+++ ++P  ++++  +GC  LV   D                         
Sbjct: 1005 LELRNCKFLRNIVKIPHCLKRMDASGCELLVISPDY------------------------ 1040

Query: 841  LAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYA 900
            +A  M R     + N ++ L  +V  SEIP++   Q   SSI+ +   N  +   +    
Sbjct: 1041 IADMMFRNQDLKLRNFKREL--IVTYSEIPKFCNNQTTESSISFSFQHN--SDMIIPALV 1096

Query: 901  ICCVFHVLKNS 911
            +C VF V  +S
Sbjct: 1097 VCVVFKVDADS 1107


>gi|357449991|ref|XP_003595272.1| Heat shock protein [Medicago truncatula]
 gi|355484320|gb|AES65523.1| Heat shock protein [Medicago truncatula]
          Length = 1805

 Score =  378 bits (971), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 246/655 (37%), Positives = 374/655 (57%), Gaps = 40/655 (6%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGI 91
           K+T+AR VY+ IS +F+   FL  +RE +   GL  LQ  LLS++L   D  I +V+ GI
Sbjct: 225 KSTLARAVYNHISDQFDGVCFLAGIRESAINHGLAQLQETLLSEILGEEDIRIRDVYRGI 284

Query: 92  DMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVY 151
            ++  RLQRKKVLLV+DDV  V Q+Q LAG  +WFG GS+I++T+RD+HLL  H +  +Y
Sbjct: 285 SIIKRRLQRKKVLLVLDDVDKVNQIQVLAGGHDWFGPGSKIVVTTRDKHLLAIHEILNLY 344

Query: 152 KPHGLNYDEALQLFNMKAFKTYQPLQECV-QLSARIIRYAGGLPLALEVLGSFLSGRSVD 210
           +   LN++++L LFN  AF+  + +  C   +S R + YA GLPLALEV+GS L G+S+D
Sbjct: 345 EVKQLNHEKSLDLFNWHAFRN-RKMDPCYSDISNRAVSYASGLPLALEVIGSHLFGKSLD 403

Query: 211 EWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGF 270
            W+S+L++ E     EI +IL++S+D L + +K IFLDIACFF   +  Y    L   GF
Sbjct: 404 VWKSSLDKYERVLHKEIHEILKVSYDDLDDDQKGIFLDIACFFNSYEMSYAKEMLYLHGF 463

Query: 271 HPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHV 329
               GI+VL +K LI V  N  + MHDL+Q++G++IV+++S  E G+RSRLW ++++ HV
Sbjct: 464 SAENGIQVLTDKSLIKVDGNGCVRMHDLVQDMGREIVRQESTVEPGRRSRLWFDDDIVHV 523

Query: 330 LTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRL 389
           L  +TGT+ +E I++ N  ++ EV    S KAF+KM NL++L I + +   G + L N L
Sbjct: 524 LETNTGTDTIEVIIM-NLCNDKEVQW--SGKAFNKMKNLKILIIRSARFSRGPQKLPNSL 580

Query: 390 RLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMP 449
           R+L W GYP + LP++    K + I          +K +K  + L  +     + L  +P
Sbjct: 581 RVLDWNGYPSQSLPADFN-PKNLMILSLPESCLVSFKLLKVFESLSFLDFKGCKLLTELP 639

Query: 450 DFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNL 509
             +G  NL  L L+ CT L  IH S+   NKL++L+ + C  L  L   I + SLE    
Sbjct: 640 SLSGLVNLGALCLDDCTNLIRIHESIGFLNKLVLLSSQRCKQLELLVPNINLPSLE---- 695

Query: 510 KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGL 569
                         TLD+ G  + + FPE++  ME++  ++L+ T+I  LP SI  L GL
Sbjct: 696 --------------TLDIRGCSRLKSFPEVLGVMENIRYVYLDQTSIGKLPFSIRNLVGL 741

Query: 570 VLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSI-K 628
             + L+ C SL  LP ++  L  L  +   GC   + F +     K  SE+F +   + K
Sbjct: 742 RQMFLRECMSLTQLPDSIRILPKLEIITAYGCRGFRLFED---KEKVGSEVFPEAMLVCK 798

Query: 629 EVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLG 683
           E   S+E    L++ +L+ C      P ++I + S   L+ +  F  E + +  G
Sbjct: 799 E--GSVE---SLDMSSLNIC------PDNVIEVFSTSILDGNVVFMREGIAKGRG 842



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 84/200 (42%), Gaps = 48/200 (24%)

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDC 648
            + L  L   GC  L + P +   + +L  L LD  T++  +  SI  L KL LL+   C
Sbjct: 621 FESLSFLDFKGCKLLTELPSL-SGLVNLGALCLDDCTNLIRIHESIGFLNKLVLLSSQRC 679

Query: 649 KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI 708
           K L  L  +I  L SL+TL++ GC +L++ PE LG +E++  + +  T++          
Sbjct: 680 KQLELLVPNI-NLPSLETLDIRGCSRLKSFPEVLGVMENIRYVYLDQTSI---------- 728

Query: 709 PINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVS 767
                                             G LP  I NL  L++++L +  S   
Sbjct: 729 ----------------------------------GKLPFSIRNLVGLRQMFLRECMSLTQ 754

Query: 768 LPTSITHLSKLLNIELEDCK 787
           LP SI  L KL  I    C+
Sbjct: 755 LPDSIRILPKLEIITAYGCR 774



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 26/190 (13%)

Query: 634 IELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDI 693
           +++   L  L+   CK L  LPS +  L +L  L L  C  L  + E++G +  L     
Sbjct: 618 LKVFESLSFLDFKGCKLLTELPS-LSGLVNLGALCLDDCTNLIRIHESIGFLNKL----- 671

Query: 694 SGTAVPHSTSWYSYIPINLMR-KSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNL 752
                         + ++  R K + L +P+++ L SL  L++  C+ ++ + P  +G +
Sbjct: 672 --------------VLLSSQRCKQLELLVPNIN-LPSLETLDIRGCSRLK-SFPEVLGVM 715

Query: 753 CSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP---QLPPNIRQVRVNGCAS 809
            +++ +YL + S   LP SI +L  L  + L +C  L  LP   ++ P +  +   GC  
Sbjct: 716 ENIRYVYLDQTSIGKLPFSIRNLVGLRQMFLRECMSLTQLPDSIRILPKLEIITAYGCRG 775

Query: 810 LVTLLDALKL 819
                D  K+
Sbjct: 776 FRLFEDKEKV 785


>gi|105922359|gb|ABF81412.1| NBS type disease resistance protein [Populus trichocarpa]
          Length = 520

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 219/438 (50%), Positives = 297/438 (67%), Gaps = 13/438 (2%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           +DSR + L   +D  ++D   IGICGMGG+GKTT+ARV+YD I  +F  S FL NVRE+ 
Sbjct: 86  IDSRLKVLNEYIDEQANDTLFIGICGMGGMGKTTVARVLYDRIRWQFGGSCFLANVREVF 145

Query: 60  SSKGGLVSLQRQLLSQL---LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQL 116
           + K GL  LQ QLLS++   L  A +S       ID++  RL+ KKVLL++DDV D +QL
Sbjct: 146 AEKDGLCRLQEQLLSEISMELPTARDSSRR----IDLIKRRLRLKKVLLILDDVDDEEQL 201

Query: 117 QSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
           Q LA     FG GSRIIITSR++H+L +HGV  +Y+   LN  +AL LF+ KAFK  QP 
Sbjct: 202 QMLAAEHGTFGPGSRIIITSRNKHVLDSHGVTRIYEAEKLNDKDALILFSWKAFKRDQPA 261

Query: 177 QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
           ++  +LS +++ YA GLPLALEV+GSFL  R + EW+S ++R+   P  +I+D+L+ISFD
Sbjct: 262 EDLSELSKQVVGYANGLPLALEVIGSFLHKRGLREWKSAIDRMNDIPDRKIIDVLRISFD 321

Query: 237 GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
           GL ELEKKIFLDIACF KG  +D +T  L+ CGFH  IG++ LIEK LI V  + + MH+
Sbjct: 322 GLHELEKKIFLDIACFLKGMKKDRITRLLDSCGFHADIGMQALIEKSLIRVSRDEIRMHN 381

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LLQ++G++IV+ +SPEE G+RSRL   ++VC  L +STG   +E I +D    +   +  
Sbjct: 382 LLQKMGEEIVRCESPEEPGRRSRLCTYKDVCDALKDSTGK--IESIFVDLPKAKEAPW-- 437

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            +  AFSKMT LRLLKI N+ L  G EYLSN LR L W  YP K LP+  ++D+ +E+YM
Sbjct: 438 -NMTAFSKMTKLRLLKIHNVDLSEGPEYLSNELRFLEWHAYPSKSLPACYRLDELVELYM 496

Query: 417 CYSRIGELWKGIKHLDKL 434
             S I +LW G K++ +L
Sbjct: 497 SCSSIEQLWCGCKYIPEL 514


>gi|10121908|gb|AAG13418.1|AC000348_15 T7N9.23 [Arabidopsis thaliana]
          Length = 1560

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 275/915 (30%), Positives = 454/915 (49%), Gaps = 180/915 (19%)

Query: 1    MDSRCEKLRFLMDS-GSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            ++S  + L  L+D+  SS V+++G+ GMGG+GKTT+A+  Y+ I   FE   F+ ++RE 
Sbjct: 339  LESPLKDLTGLIDTESSSGVQVLGLYGMGGIGKTTLAKAFYNKIVGNFEQRAFISDIRER 398

Query: 60   SS-KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            SS + GLV+LQ+ L+ +L +L    I +V  G++ + + +  KK+++V+DDV  + Q+ +
Sbjct: 399  SSAENGLVTLQKTLIKELFRLVP-EIEDVSIGLEKIKANVHEKKIIVVLDDVDHIDQVHA 457

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            L G   W+G G+ I+IT+RD  +L    V++ Y+   L   +AL+LF+  + +  +P + 
Sbjct: 458  LVGETRWYGQGTLIVITTRDSEILSKLSVNQQYEVKCLTEPQALKLFSYHSLRKEEPTKN 517

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVD-EWRSTLERLEIEPPSEILDILQISFDG 237
             + LS +I++ +G LPLA+EV GS L  +  + +W++ L++L+   P  + D+L++SF  
Sbjct: 518  LLALSKKIVQISGLLPLAVEVFGSLLYDKKEEKDWQTQLDKLKKTQPGNLQDVLELSFKS 577

Query: 238  LQELEKKIFLDIACFFKGND--RDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWM 294
            L + EKK+FLDIAC F   +  +D V   L+GCG +    + VL +K L+ +  N+TLWM
Sbjct: 578  LDDEEKKVFLDIACLFLKMEIKKDEVVIVLKGCGLNAEAALSVLRQKSLVKILANDTLWM 637

Query: 295  HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD--------- 345
            HD ++++G+Q+V ++S E+ G RSRLW   E+  VL    GT  + GIVLD         
Sbjct: 638  HDQIRDMGRQMVLKESREDPGLRSRLWDRGEIMTVLNNMKGTSSIRGIVLDFKKKFARDP 697

Query: 346  --------------------NYHHENEVYLCASAK-----------AFSKMTNLRLLKIC 374
                                NY     V   A  K           +F+ MT LRLL+I 
Sbjct: 698  TADEIVSRNLRNNPGIYSVFNYLKNKLVRFPAEEKPKSSEITIPVESFAPMTKLRLLQIN 757

Query: 375  NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNL---------------------------- 406
            N++L   L+ L + L+ + W+G PL+ LP +                             
Sbjct: 758  NVELEGNLKLLPSELKWIQWKGCPLENLPPDFLARQLSVLDLSESGIRQVQTLRNKMVSF 817

Query: 407  ----QMDK--------TIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGA 454
                 M K        T++ ++C+ ++ E          LKV+IL    +L  +PD +  
Sbjct: 818  LLSCSMGKHIVLSQILTVKTFLCFFQVDE---------NLKVVILRGCHSLEAIPDLSNH 868

Query: 455  PNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPT 514
              LEKL+ E CT L ++  S+    KLI L+ + C+                  L     
Sbjct: 869  EALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCS-----------------KLSEFLV 911

Query: 515  TISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL 574
             +SGLK L  L +SG       PE +  M  L EL L+GTAI+ LP SI  L  L +L+L
Sbjct: 912  DVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSL 971

Query: 575  KNCR----------------------SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVR 612
            + C+                      +L+ LP ++ +LK L+ L L  C+ L K P+ + 
Sbjct: 972  RGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIN 1031

Query: 613  SMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSS--------------- 657
             +K L +LF++G++++E+P     L  L   +  DCK L ++PSS               
Sbjct: 1032 ELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST 1091

Query: 658  --------IIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIP 709
                    I AL  ++ L L  C  L+ +P+++G +++L  L++ G+ +           
Sbjct: 1092 PIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIE---------- 1141

Query: 710  INLMRKSVALKLPSLSG-LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSL 768
                      +LP   G L  L +L +++C +++  LP   G+L SL  LY+ +     L
Sbjct: 1142 ----------ELPEEFGKLEKLVELRMSNCKMLK-RLPESFGDLKSLHRLYMKETLVSEL 1190

Query: 769  PTSITHLSKLLNIEL 783
            P S  +LS L+ +E+
Sbjct: 1191 PESFGNLSNLMVLEM 1205



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 172/643 (26%), Positives = 291/643 (45%), Gaps = 92/643 (14%)

Query: 419  SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGA-PNLEKLILEGCTRLYEIHPSLLL 477
            S++ E    +  L  L+ + LS   +L  +P+  GA  +L++L+L+G T +  +  S+  
Sbjct: 904  SKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDG-TAIKNLPESINR 962

Query: 478  HNKLIILNMKDCTSLITLPGKI-LMKSLEKL-----NLKSLPTTISGLKCLSTLDVSGDL 531
               L IL+++ C  +  LP  I  +KSLEKL      LK+LP++I  LK L  L +    
Sbjct: 963  LQNLEILSLRGC-KIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCT 1021

Query: 532  KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL----------- 580
               + P+ +  ++ L +L + G+A+  LPL    L  L   +  +C+ L           
Sbjct: 1022 SLSKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLN 1081

Query: 581  ------------EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIK 628
                        E LP  +  L  +R L+L  C  LK  P+ +  M  L  L L+G++I+
Sbjct: 1082 SLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIE 1141

Query: 629  EVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
            E+P     L KL  L +S+CK L RLP S   LKSL  L +     +  +PE+ G + +L
Sbjct: 1142 ELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETL-VSELPESFGNLSNL 1200

Query: 689  EELD--------ISGTAVPHSTSWYSYIPI-NLMRKSVALKLPSLSGLCSLRKLNLTDCN 739
              L+        IS + VP ++    ++ + N   K   LKL  L   CS R        
Sbjct: 1201 MVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFSK--LLKLEELDA-CSWR-------- 1249

Query: 740  LMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
             + G +P D+  L  L +L L  N F SLP+S+  LS L  + L DC+ L+ LP LP  +
Sbjct: 1250 -ISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKL 1308

Query: 800  RQVRVNGCASLVTLLDALKLCK-SDSTMIACLDSLKLLG---------------NKSLAF 843
             Q+ +  C SL ++ D  +L   +D  +  C   + + G               N + + 
Sbjct: 1309 EQLNLANCFSLESVSDLSELTILTDLNLTNCAKVVDIPGLEHLTALKRLYMTGCNSNYSL 1368

Query: 844  SMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICC 903
            ++ +   +A     ++LS  +PG+ +P+WF   ++G      +P+     ++L G  I  
Sbjct: 1369 AVKKRLSKASLKMMRNLS--LPGNRVPDWF---SQGPVTFSAQPN-----RELRGVIIAV 1418

Query: 904  VFHVLKNSRGNNCFGSYPTHQLNCHI----GHGIYGIGFRDKFGQAGSDHLWLLYLSRQT 959
            V   L +   ++ +      ++   I     H            +  +D    L++ R +
Sbjct: 1419 VV-ALNDETEDDDYQLPDVMEVQAQIHKLDHHKCTNTLHLSGVPRTNNDQ---LHICRYS 1474

Query: 960  CYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVY 1002
             +    PL + L+   +  V +   P + QG+E+KM G+H VY
Sbjct: 1475 AFH---PLVTMLKDGYTIQV-IKRNPPIKQGVELKMHGIHLVY 1513



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 148/322 (45%), Gaps = 43/322 (13%)

Query: 399  LKFLPSNL-QMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPN 456
            LKFLP ++  MD    + +  S I EL +    L+KL  + +S+ + L R+P+ F    +
Sbjct: 1117 LKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLKS 1176

Query: 457  LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
            L +L ++  T + E+  S    + L++L M     L  +    +  + E+     +P + 
Sbjct: 1177 LHRLYMKE-TLVSELPESFGNLSNLMVLEMLK-KPLFRISESNVPGTSEEPRFVEVPNSF 1234

Query: 517  SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
            S L  L  LD        + P+ +E +  L +L+L       LP S+  LS L  L+L++
Sbjct: 1235 SKLLKLEELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRD 1294

Query: 577  CRSLEILPVTVSNLKC-LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIE 635
            CR L+ LP     L C L  L L+ C  L+       S+ DLSE                
Sbjct: 1295 CRELKRLP----PLPCKLEQLNLANCFSLE-------SVSDLSE---------------- 1327

Query: 636  LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC---FKLENVPETLGQ--IESLEE 690
             LT L  LNL++C  +V +P  +  L +LK L ++GC   + L  V + L +  ++ +  
Sbjct: 1328 -LTILTDLNLTNCAKVVDIP-GLEHLTALKRLYMTGCNSNYSLA-VKKRLSKASLKMMRN 1384

Query: 691  LDISGTAVPHSTSWYSYIPINL 712
            L + G  VP    W+S  P+  
Sbjct: 1385 LSLPGNRVP---DWFSQGPVTF 1403


>gi|359486092|ref|XP_002274052.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 919

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 281/729 (38%), Positives = 409/729 (56%), Gaps = 77/729 (10%)

Query: 3   SRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK 62
           SR +++   +   SSDVR++GICG+GG+GKTTIA+VVY+ +S EFE   FL+N+ E+S+ 
Sbjct: 200 SRVKEMILRLHMESSDVRIVGICGVGGIGKTTIAKVVYNELSCEFECMSFLENIGEVSNT 259

Query: 63  GGLVSLQRQLLSQLLK-LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAG 121
            GL  LQ QLL  +L+     ++  V     M+   L  K+VL+V+DDV    QL+ L G
Sbjct: 260 QGLSHLQNQLLVDVLEGEVSQNMNGVAHKASMIKDILSSKRVLMVLDDVDHPSQLEYLLG 319

Query: 122 NREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQ 181
           +REW G GSR+IIT+R++H+L    VD +Y+  GLN++E  +LF++ AFK   P  +   
Sbjct: 320 HREWLGEGSRVIITTRNKHVLAVQKVDNLYEVKGLNFEEDCELFSLYAFKQNLPKSDYRN 379

Query: 182 LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQEL 241
           L+ R++ Y  GLPLAL+VLGS L  +++ EW S L +L+ EP +EI ++L+ S+DGL   
Sbjct: 380 LACRVVGYCQGLPLALKVLGSLLFNKTIPEWESELHKLDREPEAEIHNVLKRSYDGLDRT 439

Query: 242 EKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQEL 301
           EK IFLD+ACFFKG DRD+V+  L+GC FH   GIR L +KCLIT+  N + MHDL+Q +
Sbjct: 440 EKNIFLDVACFFKGEDRDFVSRILDGCDFHAKRGIRNLNDKCLITLPYNEIRMHDLIQHM 499

Query: 302 GQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKA 361
           G +IV+ + P+E  K SRLW   + C      T  E +E + + +  +  ++        
Sbjct: 500 GWEIVREKFPDEPNKWSRLW---DPCDFERALTAYEDLERLKVIDLSYSRKL---IQMSE 553

Query: 362 FSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPS--NLQMDKTIEIYMCYS 419
           FS+M NL  L +      NG   L             +   PS  NL+   T+ +  C  
Sbjct: 554 FSRMPNLESLFL------NGCVSL-------------IDIHPSVGNLKKLTTLSLRSC-D 593

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTG-APNLEKLILEGCTRLYEIHPSLLLH 478
           ++  L   I  L+ L+++ LS+     + P   G   +L KL L+  T + ++  S+   
Sbjct: 594 KLKNLPDSIWDLESLEILNLSYCSKFEKFPGKGGNMKSLRKLHLKD-TAIKDLPDSIGDL 652

Query: 479 NKLIILNMKDCTSLITLPGK-ILMKSLEKL-----NLKSLPTTISGLKCLSTLDVSGDLK 532
             L IL++ DC+     P K   MKSL +L      +K LP +I  L+ L +LDVSG  K
Sbjct: 653 ESLEILDLSDCSKFEKFPEKGGNMKSLNQLLLRNTAIKDLPDSIGDLESLESLDVSGS-K 711

Query: 533 FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEI---------- 582
           F +FPE   +M+ L++L L  TAI+ LP SI  L  L  L+L +C   E           
Sbjct: 712 FEKFPEKGGNMKSLNQLLLRNTAIKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKS 771

Query: 583 -------------LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKE 629
                        LP ++ +LK L  L LS CSK +KFPE   +MK L EL L  T+IK+
Sbjct: 772 LKKLRLRNTAIKDLPDSIGDLKSLEFLDLSDCSKFEKFPEKGGNMKRLRELHLKITAIKD 831

Query: 630 VPSSIELLTKLELLNLSDCKNLVRLPSSIIA--LKSLKTLNLSGCFKLENVPETLGQI-- 685
           +P++I  L KL+ L LSDC +L      +I+  L +L+ LN+S C       +  GQI  
Sbjct: 832 LPTNISRLKKLKRLVLSDCSDLW---EGLISNQLCNLQKLNISQC-------KMAGQILV 881

Query: 686 --ESLEELD 692
              SLEE+D
Sbjct: 882 LPSSLEEID 890



 Score =  166 bits (420), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 132/382 (34%), Positives = 188/382 (49%), Gaps = 85/382 (22%)

Query: 431 LDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCT 490
           L++LKV+ LS+S  LI+M +F+  PNLE L L GC  L +IHPS+    KL  L+++ C 
Sbjct: 534 LERLKVIDLSYSRKLIQMSEFSRMPNLESLFLNGCVSLIDIHPSVGNLKKLTTLSLRSCD 593

Query: 491 SLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELH 550
            L                 K+LP +I  L+ L  L++S   KF +FP    +M+ L +LH
Sbjct: 594 KL-----------------KNLPDSIWDLESLEILNLSYCSKFEKFPGKGGNMKSLRKLH 636

Query: 551 LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI 610
           L+ TAI+ LP SI                         +L+ L  L LS CSK +KFPE 
Sbjct: 637 LKDTAIKDLPDSI------------------------GDLESLEILDLSDCSKFEKFPEK 672

Query: 611 VRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK--------------------- 649
             +MK L++L L  T+IK++P SI  L  LE L++S  K                     
Sbjct: 673 GGNMKSLNQLLLRNTAIKDLPDSIGDLESLESLDVSGSKFEKFPEKGGNMKSLNQLLLRN 732

Query: 650 -NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI 708
             +  LP SI  L+SL++L+LS C K E  PE  G ++SL++L +  TA+          
Sbjct: 733 TAIKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLKKLRLRNTAIK--------- 783

Query: 709 PINLMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS 767
                       LP S+  L SL  L+L+DC+  E   P   GN+  L+EL+L   +   
Sbjct: 784 -----------DLPDSIGDLKSLEFLDLSDCSKFE-KFPEKGGNMKRLRELHLKITAIKD 831

Query: 768 LPTSITHLSKLLNIELEDCKRL 789
           LPT+I+ L KL  + L DC  L
Sbjct: 832 LPTNISRLKKLKRLVLSDCSDL 853



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/295 (34%), Positives = 157/295 (53%), Gaps = 8/295 (2%)

Query: 514 TTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLL 572
           T    L+ L  +D+S   K  +  E    M +L  L L G  ++  +  S+  L  L  L
Sbjct: 529 TAYEDLERLKVIDLSYSRKLIQMSEF-SRMPNLESLFLNGCVSLIDIHPSVGNLKKLTTL 587

Query: 573 NLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPS 632
           +L++C  L+ LP ++ +L+ L  L LS CSK +KFP    +MK L +L L  T+IK++P 
Sbjct: 588 SLRSCDKLKNLPDSIWDLESLEILNLSYCSKFEKFPGKGGNMKSLRKLHLKDTAIKDLPD 647

Query: 633 SIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD 692
           SI  L  LE+L+LSDC    + P     +KSL  L L     ++++P+++G +ESLE LD
Sbjct: 648 SIGDLESLEILDLSDCSKFEKFPEKGGNMKSLNQLLLRNT-AIKDLPDSIGDLESLESLD 706

Query: 693 ISGTAV---PHSTSWYSYIPINLMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSD 748
           +SG+     P        +   L+R +    LP S+  L SL  L+L+DC+  E   P  
Sbjct: 707 VSGSKFEKFPEKGGNMKSLNQLLLRNTAIKDLPDSIGDLESLESLDLSDCSKFE-KFPEK 765

Query: 749 IGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR 803
            GN+ SLK+L L   +   LP SI  L  L  ++L DC + +  P+   N++++R
Sbjct: 766 GGNMKSLKKLRLRNTAIKDLPDSIGDLKSLEFLDLSDCSKFEKFPEKGGNMKRLR 820


>gi|357449443|ref|XP_003594998.1| TMV resistance protein N [Medicago truncatula]
 gi|355484046|gb|AES65249.1| TMV resistance protein N [Medicago truncatula]
          Length = 1179

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 254/713 (35%), Positives = 391/713 (54%), Gaps = 73/713 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++ + E++  L ++GS+DVR +G+ GMGG+GKT +A+ +YD    +FE   FL+NVRE S
Sbjct: 299 IEKKYEEIELLTNNGSNDVRTLGLWGMGGIGKTALAKKLYDNYCSQFEYHCFLENVREES 358

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +K GL  ++++L S LLKL  ++ +  F+   +   RL+R K L+V+DDV  ++Q ++L 
Sbjct: 359 TKCGLKVVRKKLFSTLLKLGHDAPY--FEN-PIFKKRLERAKCLIVLDDVATLEQAENL- 414

Query: 121 GNREWFGSGSRIIITSRDE---HLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
             +   G GSR+I+T+RD    H  +   V EV K   LN DE+LQLF+  AF+     +
Sbjct: 415 --KIGLGPGSRVIVTTRDSQICHQFEGFVVREVKK---LNEDESLQLFSCNAFQEKHAKE 469

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
              +LS   I Y  G PLAL+VLG+ L  +S + W S LE+++  P + I D+L++SF  
Sbjct: 470 GYEELSKSAIGYCRGNPLALKVLGANLCAKSKEAWESELEKIKEIPYAGIHDVLKLSFYD 529

Query: 238 LQELEKKIFLDIACFFKGN--------DRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-H 288
           L   ++ IFLDIACFF            R+Y+ +    C F+P   I VL+ K L+T  +
Sbjct: 530 LDRTQRDIFLDIACFFYPTINEFDCYTQREYIIDLFNACKFYPATSIEVLLHKSLMTFGY 589

Query: 289 NNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYH 348
            + + MHDL+ E+G++IV++++P++ GKRSRLW  E +  V   + GT+ VE I+ D   
Sbjct: 590 CDRIQMHDLVVEMGREIVKQEAPKDPGKRSRLWDPELIYEVFKYNKGTDAVEVILFDT-S 648

Query: 349 HENEVYLCASAKAFSKMTNLRLLKICN----LQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
              +VYL  S+++F  M NLRLL I N    + L  GLE+LS++L  L W  +PL+ LPS
Sbjct: 649 KIGDVYL--SSRSFESMINLRLLHIANKCNNVHLQEGLEWLSDKLSYLHWESFPLESLPS 706

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
                K +E+ M +S++ +LW  I+ LD L ++ L +SE+LI +PD + APNL+ L L  
Sbjct: 707 TFCPQKLVELSMTHSKLRKLWDRIQKLDNLTIIKLDNSEDLIEIPDLSRAPNLKILSLAY 766

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLST 524
           C  L+++HPS+    KL  L +K CT + +L   I  KSL  L+L    + +    C+++
Sbjct: 767 CVSLHQLHPSIFSAPKLRELCLKGCTKIESLVTDIHSKSLLTLDLTDCSSLVQF--CVTS 824

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
                              E ++ L L GT I      +   S L  L+L +C+ L  + 
Sbjct: 825 -------------------EEMTWLSLRGTTIHEFSSLMLRNSKLDYLDLSDCKKLNFVG 865

Query: 585 VTVSNLKCLRSL---KLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLE 641
             +SN + L SL    LSGC+++        SM       LDG               LE
Sbjct: 866 KKLSNDRGLESLSILNLSGCTQINTL-----SMS----FILDGAR------------SLE 904

Query: 642 LLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
            L L +C NL  LP +I     L  L L GC  L ++P+    +E L  ++ +
Sbjct: 905 FLYLRNCCNLETLPDNIQNCLMLSFLELDGCINLNSLPKLPASLEDLSAINCT 957



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 130/513 (25%), Positives = 219/513 (42%), Gaps = 95/513 (18%)

Query: 544  EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            + L EL +  + +R L   I+ L  L ++ L N   L  +P  +S    L+ L L+ C  
Sbjct: 711  QKLVELSMTHSKLRKLWDRIQKLDNLTIIKLDNSEDLIEIP-DLSRAPNLKILSLAYCVS 769

Query: 604  LKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
            L +    + S   L EL L G T I+ + + I   + L L +L+DC +LV+     +  +
Sbjct: 770  LHQLHPSIFSAPKLRELCLKGCTKIESLVTDIHSKSLLTL-DLTDCSSLVQF---CVTSE 825

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
             +  L+L G   +      + +   L+ LD+S               +N + K    KL 
Sbjct: 826  EMTWLSLRGT-TIHEFSSLMLRNSKLDYLDLSDCK-----------KLNFVGK----KLS 869

Query: 723  SLSGLCSLRKLNLTDCNLMEG-ALPSDIGNLCSLKELYLSKN-SFVSLPTSITHLSKLLN 780
            +  GL SL  LNL+ C  +   ++   +    SL+ LYL    +  +LP +I +   L  
Sbjct: 870  NDRGLESLSILNLSGCTQINTLSMSFILDGARSLEFLYLRNCCNLETLPDNIQNCLMLSF 929

Query: 781  IELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKS 840
            +EL+ C  L SLP+LP ++  +    C    T LD   + +            ++L N  
Sbjct: 930  LELDGCINLNSLPKLPASLEDLSAINC----TYLDTNSIQR------------EMLKNML 973

Query: 841  LAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWF-MYQNEGSSITVTRPSNLYNKKKLVGY 899
              F     + E       +   ++P +E+P  F  +  E S I    P +  N+      
Sbjct: 974  YRFRFGEPFPE-------YFLSLLPVAEVPWGFDFFTTEASIIIPPIPKDGLNQ------ 1020

Query: 900  AICCVFHVLKNSRGNNCFGSYPTHQLNCHI-GHGI----YGIGFRDKFGQAGSDHLWLLY 954
             + CVF     S G N   S     ++C I  HG     + I F +  G   SDH+ LL 
Sbjct: 1021 IVLCVFL----SEGLNLTFS----GVDCTIYNHGDRSNEWSISFVNVSGAMISDHV-LLI 1071

Query: 955  LSRQTCYDIRLPLESNLEPFESNHVNVSFE--PW--LGQGLE----VKMCGLHPV-YMDE 1005
             S   C+  R+         +++H ++SFE  P+  +G+ L     +K CG+  V  ++ 
Sbjct: 1072 CSPAICHQTRV---------DNDHYSLSFEVKPYGKVGEQLSSTKGIKGCGVILVPSLER 1122

Query: 1006 VEELDQTTNQPSRFTVYNL--------NEFDQH 1030
               LD ++++ S+  +  L        +EFDQH
Sbjct: 1123 SLGLDGSSSR-SKVEIVELPFNAHQVSDEFDQH 1154


>gi|357500609|ref|XP_003620593.1| Tir-nbs-lrr resistance protein, partial [Medicago truncatula]
 gi|355495608|gb|AES76811.1| Tir-nbs-lrr resistance protein, partial [Medicago truncatula]
          Length = 1196

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 232/594 (39%), Positives = 351/594 (59%), Gaps = 43/594 (7%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNV-REISSKGGLVSLQRQLLSQLLKLADNSIWNVFDG 90
           KTT++  +YD ISH F  S F+++V ++     G +  Q+++L Q + + D+ I N    
Sbjct: 230 KTTLSMALYDQISHRFSGSCFIEDVAKKFRLHDGPLDAQKEILLQTVGIEDHHICNRHRA 289

Query: 91  IDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEV 150
            +++ SRL+R++ LL++D+V  V+QL+ +  +RE  G GSRIII SRDEH+L+ +GVD V
Sbjct: 290 TNLIQSRLRRERALLILDNVDRVEQLEKIGVHRECLGVGSRIIIISRDEHILEEYGVDVV 349

Query: 151 YKPHGLNYDEALQLFNMKAFKTYQPLQECVQ-LSARIIRYAGGLPLALEVLGSFLSGRSV 209
           YK   L+++EA  LF  KAFK  + +    + L   I+ YA GLPLA++VLGSFL GR+V
Sbjct: 350 YKVPLLDWNEAHMLFCRKAFKEEKIIMRNYESLVYEILDYANGLPLAIKVLGSFLFGRNV 409

Query: 210 DEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCG 269
            EW+S L RL   P ++++D+LQ+SFDGL+E EK+IFLDIACFF      Y  N L  C 
Sbjct: 410 TEWKSALTRLRESPDNDVMDVLQLSFDGLKETEKEIFLDIACFFNRKSEKYAKNILNCCR 469

Query: 270 FHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHV 329
           FH  IG+RVLI+K L+ ++   L MH LL+ELG++IVQ  S +E  K SRLW  E++ +V
Sbjct: 470 FHADIGLRVLIDKSLMNINGQNLEMHSLLEELGRKIVQNSSSKEPRKWSRLWSTEQLYNV 529

Query: 330 LTESTGTELVEG-IVLDNYHHENEVYLCA----------SAKAFSKMTNLRLLKIC-NLQ 377
           + E+    L         ++ ++E ++ A          + +  SKM+NLRLL I   + 
Sbjct: 530 MLENMVKLLFSNKKTYFQFYKQHEKHVKALVLNDEEVGLNVEHLSKMSNLRLLIIMWGVN 589

Query: 378 LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVM 437
           +   L  LSN+LR + W GYP K+LPSN   ++ +E+ +  S I +LW+  K+L  L+ +
Sbjct: 590 ISGSLLSLSNKLRYVQWTGYPFKYLPSNFHPNELVELILHSSNIKQLWRKKKYLPNLRGL 649

Query: 438 ILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPG 497
            L +S+ L+++ DF   PNLE L LEGC  L E+ PS+ L   L+ LN+KDC +L+++P 
Sbjct: 650 DLRYSKKLVKIVDFGEFPNLEWLNLEGCISLLELDPSIGLLRNLVYLNLKDCKNLVSIPN 709

Query: 498 KIL-MKSLEKL----------NLKSLP----------------TTISGLKCLSTLDVSGD 530
            I  + SL+ L          N + L                 +++  L CL  +++S  
Sbjct: 710 NIFGLSSLKYLYMWNCHKAFTNQRDLKNPDISESASHSRSYVLSSLHSLYCLREVNISF- 768

Query: 531 LKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
            +  +    +E +  L  L+L G     LP S+  LS LV LNL++C+ LE LP
Sbjct: 769 CRLSQVSYAIECLYWLEILNLGGNNFVTLP-SLRKLSKLVYLNLEHCKLLESLP 821



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 195/443 (44%), Gaps = 81/443 (18%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
            LR L L    KL K  +      +L  L L+G  S+ E+  SI LL  L  LNL DCKNL
Sbjct: 646  LRGLDLRYSKKLVKIVDF-GEFPNLEWLNLEGCISLLELDPSIGLLRNLVYLNLKDCKNL 704

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPIN 711
            V +P++I  L SLK L +  C K             L+  DIS +A  HS S+       
Sbjct: 705  VSIPNNIFGLSSLKYLYMWNCHK------AFTNQRDLKNPDISESA-SHSRSYV------ 751

Query: 712  LMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTS 771
                     L SL  L  LR++N++ C L + +    I  L  L+ L L  N+FV+LP S
Sbjct: 752  ---------LSSLHSLYCLREVNISFCRLSQVSYA--IECLYWLEILNLGGNNFVTLP-S 799

Query: 772  ITHLSKLLNIELEDCKRLQSLPQL--PPNIRQVRVNGCASLVTLLDALKLCKSDSTMIAC 829
            +  LSKL+ + LE CK L+SLPQL  P NI +           L           T +  
Sbjct: 800  LRKLSKLVYLNLEHCKLLESLPQLPFPTNIGEDHRENNNKFHDLF------TRKVTQLVI 853

Query: 830  LDSLKLLGNK----SLAFSMLREYLEAV-----SNTRQHLSVVVPGSEIPEWFMYQNEGS 880
             +  K LG +    S+AFS + ++++A      ++  + + +V PGSEIP W   Q+ GS
Sbjct: 854  FNCPK-LGERERCSSMAFSWMIQFIQAYQHFYPASLFEGIHIVTPGSEIPSWINNQSVGS 912

Query: 881  SITVTRPSNLY-NKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFR 939
            SI + R   ++ N   ++G+  C VF V             P  ++   I      I   
Sbjct: 913  SIPIDRSPIMHDNNNNIIGFVCCAVFSVA------------PNQEILPWIADIKLVIDSL 960

Query: 940  DKFG----------QAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQ 989
              F              S HLW++YLSR++ YD           FE   ++         
Sbjct: 961  SSFSVPVILKRYLITTKSSHLWIIYLSRES-YD----------KFEK--ISCYIVGGEDL 1007

Query: 990  GLEVKMCGLHPVYMDEVEELDQT 1012
            G+EV  CG   V   +++E + T
Sbjct: 1008 GMEVNSCGYRWVCKQDLQEFNLT 1030


>gi|356560037|ref|XP_003548302.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1083

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 269/717 (37%), Positives = 379/717 (52%), Gaps = 61/717 (8%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++S+  ++  L+D GS D V +IGI GMGGLGKTT+A  VY+LI+  F+ S FL NVRE 
Sbjct: 191 LESQVTEVMKLLDVGSDDLVHIIGIHGMGGLGKTTLALEVYNLIALHFDESCFLQNVREE 250

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  LLS+LL   D ++ +  +G   +  RLQRKKVLL++DDV   +QL+++
Sbjct: 251 SNKHGLKHLQSILLSKLLGEKDITLTSWQEGASTIQHRLQRKKVLLILDDVNKREQLKAI 310

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G  +WFG GSR+IIT+RD+HLLK H V+  Y+   LN++ ALQL    AFK  +     
Sbjct: 311 VGRPDWFGPGSRVIITTRDKHLLKCHEVERTYEVKVLNHNAALQLLTWNAFKREKIDPSY 370

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R++ YA GLPLALE++GS + G+SV  W S +E  +  P  EIL+IL++SFD L 
Sbjct: 371 EDVLNRVVTYASGLPLALEIIGSNMFGKSVAGWESAVEHYKRIPNDEILEILKVSFDALG 430

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFL----EGCGFHPVIGIRVLIEKCLITVHNNTLWMH 295
           E +K +FLDIA   KG     V + L    + C  H    I VL++K LI V +  + MH
Sbjct: 431 EEQKNVFLDIAFCLKGCKLTEVEHMLCSLYDNCMKH---HIDVLVDKSLIKVKHGIVEMH 487

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DL+Q +G++I +++SPEE GKR RLW  +++ HVL ++TGT  +E I LD      E  +
Sbjct: 488 DLIQVVGREIERQRSPEEPGKRKRLWLPKDIIHVLKDNTGTSKIEIICLDFSISYKEETV 547

Query: 356 CASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
             +  AF KM NL++L I N +   G  Y    LR+L W  YP  FLPSN      +   
Sbjct: 548 EFNENAFMKMENLKILIIRNGKFSKGPNYFPEGLRVLEWHRYPSNFLPSNFDPINLVICK 607

Query: 416 MCYSRIG--ELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
           +  S I   E     K L  L V+     + L ++PD +  PNL +L  E C  L  +  
Sbjct: 608 LPDSSIKSFEFHGSSKKLGHLTVLKFDRCKFLTQIPDVSDLPNLRELSFEDCESLVAVDD 667

Query: 474 SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKF 533
           S+    KL  L+   C  L + P          LNL S          L TL +S     
Sbjct: 668 SIGFLKKLKKLSAYGCRKLTSFP---------PLNLTS----------LETLQLSSCSSL 708

Query: 534 REFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCL 593
             FPEI+  ME++ EL L G  I+ LP S + L+GL LL L  C  ++ LP +++ +  L
Sbjct: 709 EYFPEILGEMENIRELRLTGLYIKELPFSFQNLTGLRLLALSGCGIVQ-LPCSLAMMPEL 767

Query: 594 RSLKLSGCSKLK---------KFPEIVRSMKDL---------SELFLDGTSIKEVPSSIE 635
            S     C++ +         K   I+ S   L          + FL G          +
Sbjct: 768 SSFYTDYCNRWQWIELEEGEEKLGSIISSKAQLFCATNCNLCDDFFLAG---------FK 818

Query: 636 LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD 692
               +  LNLS   N   LP     L+ L+TL++S C   E++ E  G    LE  D
Sbjct: 819 RFAHVGYLNLSG-NNFTILPEFFKELQFLRTLDVSDC---EHLQEIRGLPPILEYFD 871



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 130/333 (39%), Gaps = 86/333 (25%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
           L  LK   C  L + P+ V  + +L EL F D  S+  V  SI  L KL+ L+   C+ L
Sbjct: 628 LTVLKFDRCKFLTQIPD-VSDLPNLRELSFEDCESLVAVDDSIGFLKKLKKLSAYGCRKL 686

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPIN 711
              P   + L SL+TL LS C  LE  PE LG++E++ EL ++G  +         +P +
Sbjct: 687 TSFPP--LNLTSLETLQLSSCSSLEYFPEILGEMENIRELRLTGLYIKE-------LPFS 737

Query: 712 LMRKSVALKLPSLSGL------CSLRKLN------------------------------- 734
             +    L+L +LSG       CSL  +                                
Sbjct: 738 F-QNLTGLRLLALSGCGIVQLPCSLAMMPELSSFYTDYCNRWQWIELEEGEEKLGSIISS 796

Query: 735 ------LTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKR 788
                  T+CNL +    +       +  L LS N+F  LP     L  L  +++ DC+ 
Sbjct: 797 KAQLFCATNCNLCDDFFLAGFKRFAHVGYLNLSGNNFTILPEFFKELQFLRTLDVSDCEH 856

Query: 789 LQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLRE 848
           LQ +  LPP +       C S  +         S ++M                  +L +
Sbjct: 857 LQEIRGLPPILEYFDARNCVSFTS---------SSTSM------------------LLNQ 889

Query: 849 YLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSS 881
            L     T+     V PG+ IPEWF  Q+ G S
Sbjct: 890 ELHEAGGTQ----FVFPGTRIPEWFDQQSSGPS 918


>gi|124360568|gb|ABD33387.2| TIR [Medicago truncatula]
          Length = 1208

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 254/713 (35%), Positives = 391/713 (54%), Gaps = 73/713 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++ + E++  L ++GS+DVR +G+ GMGG+GKT +A+ +YD    +FE   FL+NVRE S
Sbjct: 328 IEKKYEEIELLTNNGSNDVRTLGLWGMGGIGKTALAKKLYDNYCSQFEYHCFLENVREES 387

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +K GL  ++++L S LLKL  ++ +  F+   +   RL+R K L+V+DDV  ++Q ++L 
Sbjct: 388 TKCGLKVVRKKLFSTLLKLGHDAPY--FEN-PIFKKRLERAKCLIVLDDVATLEQAENL- 443

Query: 121 GNREWFGSGSRIIITSRDE---HLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
             +   G GSR+I+T+RD    H  +   V EV K   LN DE+LQLF+  AF+     +
Sbjct: 444 --KIGLGPGSRVIVTTRDSQICHQFEGFVVREVKK---LNEDESLQLFSCNAFQEKHAKE 498

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
              +LS   I Y  G PLAL+VLG+ L  +S + W S LE+++  P + I D+L++SF  
Sbjct: 499 GYEELSKSAIGYCRGNPLALKVLGANLCAKSKEAWESELEKIKEIPYAGIHDVLKLSFYD 558

Query: 238 LQELEKKIFLDIACFFKGN--------DRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-H 288
           L   ++ IFLDIACFF            R+Y+ +    C F+P   I VL+ K L+T  +
Sbjct: 559 LDRTQRDIFLDIACFFYPTINEFDCYTQREYIIDLFNACKFYPATSIEVLLHKSLMTFGY 618

Query: 289 NNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYH 348
            + + MHDL+ E+G++IV++++P++ GKRSRLW  E +  V   + GT+ VE I+ D   
Sbjct: 619 CDRIQMHDLVVEMGREIVKQEAPKDPGKRSRLWDPELIYEVFKYNKGTDAVEVILFDT-S 677

Query: 349 HENEVYLCASAKAFSKMTNLRLLKICN----LQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
              +VYL  S+++F  M NLRLL I N    + L  GLE+LS++L  L W  +PL+ LPS
Sbjct: 678 KIGDVYL--SSRSFESMINLRLLHIANKCNNVHLQEGLEWLSDKLSYLHWESFPLESLPS 735

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
                K +E+ M +S++ +LW  I+ LD L ++ L +SE+LI +PD + APNL+ L L  
Sbjct: 736 TFCPQKLVELSMTHSKLRKLWDRIQKLDNLTIIKLDNSEDLIEIPDLSRAPNLKILSLAY 795

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLST 524
           C  L+++HPS+    KL  L +K CT + +L   I  KSL  L+L    + +    C+++
Sbjct: 796 CVSLHQLHPSIFSAPKLRELCLKGCTKIESLVTDIHSKSLLTLDLTDCSSLVQF--CVTS 853

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
                              E ++ L L GT I      +   S L  L+L +C+ L  + 
Sbjct: 854 -------------------EEMTWLSLRGTTIHEFSSLMLRNSKLDYLDLSDCKKLNFVG 894

Query: 585 VTVSNLKCLRSL---KLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLE 641
             +SN + L SL    LSGC+++        SM       LDG               LE
Sbjct: 895 KKLSNDRGLESLSILNLSGCTQINTL-----SMS----FILDGAR------------SLE 933

Query: 642 LLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
            L L +C NL  LP +I     L  L L GC  L ++P+    +E L  ++ +
Sbjct: 934 FLYLRNCCNLETLPDNIQNCLMLSFLELDGCINLNSLPKLPASLEDLSAINCT 986



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 130/513 (25%), Positives = 219/513 (42%), Gaps = 95/513 (18%)

Query: 544  EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            + L EL +  + +R L   I+ L  L ++ L N   L  +P  +S    L+ L L+ C  
Sbjct: 740  QKLVELSMTHSKLRKLWDRIQKLDNLTIIKLDNSEDLIEIP-DLSRAPNLKILSLAYCVS 798

Query: 604  LKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
            L +    + S   L EL L G T I+ + + I   + L L +L+DC +LV+     +  +
Sbjct: 799  LHQLHPSIFSAPKLRELCLKGCTKIESLVTDIHSKSLLTL-DLTDCSSLVQF---CVTSE 854

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
             +  L+L G   +      + +   L+ LD+S               +N + K    KL 
Sbjct: 855  EMTWLSLRGT-TIHEFSSLMLRNSKLDYLDLSDCK-----------KLNFVGK----KLS 898

Query: 723  SLSGLCSLRKLNLTDCNLMEG-ALPSDIGNLCSLKELYLSKN-SFVSLPTSITHLSKLLN 780
            +  GL SL  LNL+ C  +   ++   +    SL+ LYL    +  +LP +I +   L  
Sbjct: 899  NDRGLESLSILNLSGCTQINTLSMSFILDGARSLEFLYLRNCCNLETLPDNIQNCLMLSF 958

Query: 781  IELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKS 840
            +EL+ C  L SLP+LP ++  +    C    T LD   + +            ++L N  
Sbjct: 959  LELDGCINLNSLPKLPASLEDLSAINC----TYLDTNSIQR------------EMLKNML 1002

Query: 841  LAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWF-MYQNEGSSITVTRPSNLYNKKKLVGY 899
              F     + E       +   ++P +E+P  F  +  E S I    P +  N+      
Sbjct: 1003 YRFRFGEPFPE-------YFLSLLPVAEVPWGFDFFTTEASIIIPPIPKDGLNQ------ 1049

Query: 900  AICCVFHVLKNSRGNNCFGSYPTHQLNCHI-GHGI----YGIGFRDKFGQAGSDHLWLLY 954
             + CVF     S G N   S     ++C I  HG     + I F +  G   SDH+ LL 
Sbjct: 1050 IVLCVFL----SEGLNLTFS----GVDCTIYNHGDRSNEWSISFVNVSGAMISDHV-LLI 1100

Query: 955  LSRQTCYDIRLPLESNLEPFESNHVNVSFE--PW--LGQGLE----VKMCGLHPV-YMDE 1005
             S   C+  R+         +++H ++SFE  P+  +G+ L     +K CG+  V  ++ 
Sbjct: 1101 CSPAICHQTRV---------DNDHYSLSFEVKPYGKVGEQLSSTKGIKGCGVILVPSLER 1151

Query: 1006 VEELDQTTNQPSRFTVYNL--------NEFDQH 1030
               LD ++++ S+  +  L        +EFDQH
Sbjct: 1152 SLGLDGSSSR-SKVEIVELPFNAHQVSDEFDQH 1183


>gi|147799119|emb|CAN61627.1| hypothetical protein VITISV_024719 [Vitis vinifera]
          Length = 1520

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 241/664 (36%), Positives = 366/664 (55%), Gaps = 74/664 (11%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EKL+ +M++  + V +IGICG GG+GKTTIA  +Y+ IS+++++S FL N+RE  S+G  
Sbjct: 203 EKLKLMMNTELNKVSVIGICGPGGIGKTTIAEAIYNKISYQYDSSSFLRNIRE-KSQGDT 261

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
           + LQ +LL  +LK     I N+ +G+ M+   L  K+VL+++DDV D+KQL+ LA  ++W
Sbjct: 262 LQLQNELLHDILKEKGFKISNIDEGVTMIKRCLNSKRVLVILDDVDDLKQLKHLAZKKDW 321

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSAR 185
           F + S IIITSRD+ +L  +GVD  Y+    +  EA++LF++ AF+   P +    LS  
Sbjct: 322 FNAKSTIIITSRDKQVLXRYGVDTPYEVQKFDKKEAIELFSLWAFQENLPKEAYENLSYN 381

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           +I YA GLPLAL++LG+ L G+ + EW S L +L+  P  EI  +L+ISFDGL +++K+I
Sbjct: 382 MIEYADGLPLALKLLGASLFGKKISEWESALYKLKRIPHMEINKVLRISFDGLDDMDKEI 441

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQI 305
           FLD+ACFFKG  +D+V+  L   G H   GI  L +KCLIT+  N + MHDL+Q++G++I
Sbjct: 442 FLDVACFFKGKSKDFVSRIL---GPHAEYGIATLNDKCLITISKNMMDMHDLIQQMGKEI 498

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKM 365
           ++++  ++LG+RSR+W + +   VLT + GT  ++G+ LD      +     + ++F +M
Sbjct: 499 IRQECXDDLGRRSRIW-DSDAYDVLTRNMGTRSIKGLFLDICKFPTQF----TKESFKQM 553

Query: 366 TNLRLLKI---------------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
             LRLLKI                         LP   E+ S  L    W GY L+ LP+
Sbjct: 554 DRLRLLKIHKDDEYGCISRFSRHLDGKLFSEDHLPRDFEFPSYELTYFHWDGYSLESLPT 613

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
           N      +E+ +  S I +LW+G K  +KL V+ LSHS +L  +PDF+  PNLE L L+G
Sbjct: 614 NFHAKDLVELILRGSNIKQLWRGNKLHNKLNVINLSHSVHLTEIPDFSSVPNLEILTLKG 673

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLST 524
           C +L  +   +     L  L+  DC+ L   P                            
Sbjct: 674 CVKLECLPRGIYKWKHLQTLSCGDCSKLKRFP---------------------------- 705

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIEL--LSGLVLLNLKNCRSLEI 582
                        EI  +M  L EL L GTAI  LP S     L  L +L+ + C  L  
Sbjct: 706 -------------EIKGNMRKLRELDLSGTAIEELPSSSSFGHLKALKILSFRGCSKLNK 752

Query: 583 LPVTVSNLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLE 641
           +P  V  L  L  L LS C+ ++   P  +  +  L EL L     + +P++I  L++L+
Sbjct: 753 IPTDVCCLSSLEVLDLSYCNIMEGGIPSDICRLSSLXELNLKSNDFRSIPATINRLSRLQ 812

Query: 642 LLNL 645
            L+L
Sbjct: 813 TLDL 816



 Score =  189 bits (480), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 130/353 (36%), Positives = 187/353 (52%), Gaps = 46/353 (13%)

Query: 551  LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI 610
             E + ++ LP+ IE    L  L L+ C+ L+ LP ++   K L +L   GCS+L+ FPEI
Sbjct: 1055 FEDSDMKELPI-IENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEI 1113

Query: 611  VRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLS 670
            +  M+ L +L L G++IKE+PSSI+ L  L+ LNL+ CKNLV LP SI  L SLKTL + 
Sbjct: 1114 LEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIK 1173

Query: 671  GCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSL 730
             C +L+ +PE LG+++SLE L +                      S+  + PSLSGLCSL
Sbjct: 1174 SCPELKKLPENLGRLQSLEILYVKDF------------------DSMNCQXPSLSGLCSL 1215

Query: 731  RKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQ 790
            R L L +C L E  +PS I +L SL+ L L  N F S+P  I+ L KL+ + L  CK LQ
Sbjct: 1216 RILRLINCGLRE--IPSGICHLTSLQCLVLMGNQFSSIPDGISQLHKLIVLNLSHCKLLQ 1273

Query: 791  SLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYL 850
             +P+ P N+  +  + C SL          K  S++              L     +  +
Sbjct: 1274 HIPEPPSNLXTLVAHQCTSL----------KISSSL--------------LWSPFFKSGI 1309

Query: 851  EAVSNTRQHLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
            +      + L   +P S  IPEW  +Q +GS IT+T P N Y     +G+A+C
Sbjct: 1310 QKFVPXXKXLDTFIPESNGIPEWISHQKKGSKITLTLPQNWYENDDFLGFALC 1362



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 138/322 (42%), Gaps = 88/322 (27%)

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSD-----------------------CKNL 651
           KDL EL L G++IK++    +L  KL ++NLS                        C  L
Sbjct: 618 KDLVELILRGSNIKQLWRGNKLHNKLNVINLSHSVHLTEIPDFSSVPNLEILTLKGCVKL 677

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYI 708
             LP  I   K L+TL+   C KL+  PE  G +  L ELD+SGTA+   P S+S+    
Sbjct: 678 ECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRKLRELDLSGTAIEELPSSSSFGHLK 737

Query: 709 PINLM--RKSVAL-KLPS-LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNS 764
            + ++  R    L K+P+ +  L SL  L+L+ CN+MEG +PSDI  L SL EL L  N 
Sbjct: 738 ALKILSFRGCSKLNKIPTDVCCLSSLEVLDLSYCNIMEGGIPSDICRLSSLXELNLKSND 797

Query: 765 FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDS 824
           F S+P +I  LS+L  ++L     +Q L Q   N      +G                  
Sbjct: 798 FRSIPATINRLSRLQTLDLHGA-FVQDLNQCSQNCNDSAYHG------------------ 838

Query: 825 TMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPG-SEIPEWFMYQNEGSSIT 883
                                              + +V+PG S +PEW M +       
Sbjct: 839 ---------------------------------NGICIVLPGHSGVPEWMMXRR-----X 860

Query: 884 VTRPSNLYNKKKLVGYAICCVF 905
           +  P N +   + +G+AICCV+
Sbjct: 861 IELPQNWHQDNEFLGFAICCVY 882



 Score =  103 bits (257), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 509  LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSG 568
            LKSLP++I   K L+TL   G  +   FPEI+E ME L +L L G+AI+ +P SI+ L G
Sbjct: 1083 LKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAIKEIPSSIQRLRG 1142

Query: 569  LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSI 627
            L  LNL  C++L  LP ++ NL  L++L +  C +LKK PE +  ++ L  L++ D  S+
Sbjct: 1143 LQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPENLGRLQSLEILYVKDFDSM 1202

Query: 628  KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
                 S+  L  L +L L +C  L  +PS I  L SL+ L L G  +  ++P+ + Q+  
Sbjct: 1203 NCQXPSLSGLCSLRILRLINC-GLREIPSGICHLTSLQCLVLMG-NQFSSIPDGISQLHK 1260

Query: 688  LEELDIS 694
            L  L++S
Sbjct: 1261 LIVLNLS 1267



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/129 (40%), Positives = 78/129 (60%), Gaps = 3/129 (2%)

Query: 568 GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSI 627
            L +L LK C  LE LP  +   K L++L    CSKLK+FPEI  +M+ L EL L GT+I
Sbjct: 665 NLEILTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRKLRELDLSGTAI 724

Query: 628 KEVPSSIEL--LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE-NVPETLGQ 684
           +E+PSS     L  L++L+   C  L ++P+ +  L SL+ L+LS C  +E  +P  + +
Sbjct: 725 EELPSSSSFGHLKALKILSFRGCSKLNKIPTDVCCLSSLEVLDLSYCNIMEGGIPSDICR 784

Query: 685 IESLEELDI 693
           + SL EL++
Sbjct: 785 LSSLXELNL 793



 Score = 48.1 bits (113), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 11/156 (7%)

Query: 457  LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI-LMKSLEKLNLKSLPT- 514
            L+ L L  C  L  +  S+     L  L +K C  L  LP  +  ++SLE L +K   + 
Sbjct: 1143 LQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPENLGRLQSLEILYVKDFDSM 1202

Query: 515  -----TISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGL 569
                 ++SGL  L  L +  +   RE P  + H+  L  L L G     +P  I  L  L
Sbjct: 1203 NCQXPSLSGLCSLRILRLI-NCGLREIPSGICHLTSLQCLVLMGNQFSSIPDGISQLHKL 1261

Query: 570  VLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
            ++LNL +C+ L+ +P   SNL  L + +   C+ LK
Sbjct: 1262 IVLNLSHCKLLQHIPEPPSNLXTLVAHQ---CTSLK 1294


>gi|336238978|gb|AEI27416.1| TIR_3 [Helianthus annuus]
          Length = 1111

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 262/719 (36%), Positives = 392/719 (54%), Gaps = 75/719 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M++R   L+ +++ GS  VRM+GI G+GG GKTT+A   Y  ISH FEA   L N+RE S
Sbjct: 255 METRLRDLKLMLEIGSGGVRMVGIWGVGGGGKTTLASAAYAEISHRFEACCLLQNIREES 314

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +K GL  LQ ++LS  LK  D  + +  +G   +  RL  K+VL+V+DDV D++QL++LA
Sbjct: 315 NKHGLEKLQEKILSVALKTKDVVVGSEIEGRSTIRRRLCHKRVLVVLDDVDDLEQLEALA 374

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G+ +WFG GSRIIIT+RD+HLL +     +Y+   L++ EA++LF+  A+   +P+++  
Sbjct: 375 GSHDWFGEGSRIIITTRDKHLLSSTAHTNIYEVSLLSHYEAIKLFHRHAYNKDKPVEDFE 434

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            LS  ++ YAGGLPLA++VLGSFL  +  DEW+STL +L+  P  ++++ L+IS+DGL+ 
Sbjct: 435 TLSLDVVSYAGGLPLAVKVLGSFLYDKDRDEWKSTLAKLKCIPEEKVMERLKISYDGLEP 494

Query: 241 LEKKIFLDIACF---FKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDL 297
            +K +FLDIACF   +  +  D     L+ C FHPVIG++VL +K LI V      MHDL
Sbjct: 495 YQKDLFLDIACFMMSWYSHQFDDAMMVLDACNFHPVIGLKVLEQKSLIKVVAGEFEMHDL 554

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           +QE+   IV+ + P  L K SR+WK +++ ++         +E  VL +       Y+ +
Sbjct: 555 MQEMAHYIVRGEHPNNLEKHSRIWKWKDLEYLCDMGAAAPSMENEVLADLPR----YIIS 610

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE---- 413
               F  + N++                  +LR + W  +P    PSN Q  K       
Sbjct: 611 HPGLFDVVANMK------------------KLRWILWDNHPASLFPSNFQPTKAFLFPSN 652

Query: 414 --------IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
                   + + +S+  +LW+G K L  LK++ L +  NLI+ PDF G P LE+LIL  C
Sbjct: 653 FQPTKLRCLLLKHSQQKKLWEGCKSLPNLKILDLQNFRNLIKTPDFEGLPCLERLILVCC 712

Query: 466 TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTL 525
             L EIHPS+  H  L+ ++M+ C++L   P  I MK LE                  TL
Sbjct: 713 ESLEEIHPSIGYHKSLVFVDMRLCSALKRFPPIIHMKKLE------------------TL 754

Query: 526 DVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSI-ELLSGLVLLNLKNCRSLEILP 584
           D+S   + ++FP+I  +M+ L  L L  T I  +P S+    + LV  +L  CR L+ + 
Sbjct: 755 DLSWCKELQQFPDIQSNMDSLVTLDLCLTRIEIIPPSVGRFCTNLVSFSLHGCRKLKRIE 814

Query: 585 VTVSNLKCLRSLKLSGCS-------------KLKKFPEIVRSMKDLSELFLDGTSIKEVP 631
                LK L+ L LSGC              KL +FP  +R +        DG    ++P
Sbjct: 815 GNFHLLKSLKDLNLSGCIGLQSFHHEGSVSLKLPRFPRFLRKLNLHRCNLGDG----DIP 870

Query: 632 SSIEL-LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLE 689
           S I   L  L++L+LS+  N  RLPS +  +  LK LNLS C  L  +P+    I  L+
Sbjct: 871 SDIFCKLLNLQVLDLSE-NNFSRLPSDLSQILCLKLLNLSDCINLVELPDLPSSIAILK 928


>gi|227438275|gb|ACP30627.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1226

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 313/923 (33%), Positives = 473/923 (51%), Gaps = 100/923 (10%)

Query: 1    MDSRCEKLRFLMD-SGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            ++SR  +L  L+D   +S VR++G+ GM G+GKTT+A  VY    + F+   FL NV+  
Sbjct: 193  IESRMMELEKLIDFEETSCVRIVGVLGMAGIGKTTVADCVYKQNYNRFDGYCFLANVQNE 252

Query: 60   SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            S   GL  LQR+LL +LL   +  +       D    RL  KK+ +V+DDV +  QL++L
Sbjct: 253  SKLHGLDHLQRKLLRKLLDEDNLDVGAPEGAHDAFKDRLGNKKLFIVLDDVANENQLRNL 312

Query: 120  AGN--REWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKT-YQPL 176
             G   +E +  G+RI+IT+ ++ LL+   V+E Y    L+  E+L+LF + AF +     
Sbjct: 313  IGGAGKELYREGTRIVITTSNKKLLEK-VVNETYVVPRLSGRESLELFCLSAFSSNLCAT 371

Query: 177  QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
             E + LS + + Y+ G PLAL++LGS L  R    W+   ERL+  P  +I D+L++ ++
Sbjct: 372  PELMDLSNKFVDYSKGHPLALKLLGSDLCQRDKSYWKLKWERLQRRPDGKIHDVLKVCYE 431

Query: 237  GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
             L E E+ IFLD+ACFF+    D+V++ L          I  LI+KCLITV +N L MHD
Sbjct: 432  ELCEEEQSIFLDVACFFRSEKLDFVSSVLSTHHTDASTLISDLIDKCLITVSDNRLEMHD 491

Query: 297  LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
            LL  +G+++    S +E G R RLW +E++C VL   TGT  + GI LD     N   + 
Sbjct: 492  LLLTMGREVGYESSIKEAGNRGRLWNQEDICRVLKYKTGTAEIRGIFLD---MSNVDSMK 548

Query: 357  ASAKAFSKMTNLRLLKI------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
             SA  F++M NL+ LK             C L+ P GL+   + L  L W+GYPL++LPS
Sbjct: 549  LSADIFARMWNLKFLKFYNSHCSKWCENDCRLRFPKGLDCFPDELVYLHWQGYPLEYLPS 608

Query: 405  NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
            N    K + + + YS I +L +  K+  +L+ + LS+S+ L+ +     A  LE+L LE 
Sbjct: 609  NFNPKKLVYLNLRYSNIMQLCEDEKNTGELRWVDLSYSKELMNLTGLLEARKLERLNLEN 668

Query: 465  CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLST 524
            CT L +   ++   + L+ LN++DC                 +NLKSLP  IS LK L  
Sbjct: 669  CTSLTKC-SAIRQMDSLVSLNLRDC-----------------INLKSLPKRIS-LKSLKF 709

Query: 525  LDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
            + +SG  K ++FP I E++E    L+L+GTA++ +P SIE L  L +LNLK C  L  LP
Sbjct: 710  VILSGCSKLKKFPTISENIE---SLYLDGTAVKRVPESIENLQKLTVLNLKKCSRLMHLP 766

Query: 585  VTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLN 644
             T+  LK L+ L LSGCSKL+ FP+I   M+ L  L +D T+IK+ P  ++ ++ L+L +
Sbjct: 767  TTLCKLKSLKELLLSGCSKLESFPDINEDMESLEILLMDDTAIKQTPRKMD-MSNLKLFS 825

Query: 645  LSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSW 704
                       S +  L  L+ L  SGC +L ++  T          D +   +P S S 
Sbjct: 826  FGG--------SKVHDLTCLELLPFSGCSRLSDMYLT----------DCNLYKLPDSFSC 867

Query: 705  YSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK-N 763
             S +    + ++    LP      S++KL+                    LK LYL    
Sbjct: 868  LSLLQTLCLSRNNIKNLPG-----SIKKLH-------------------HLKSLYLKHCQ 903

Query: 764  SFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSD 823
              VSLP   ++L  L   +   C  L+++ +  P    V      S     D  KL +  
Sbjct: 904  QLVSLPVLPSNLQYL---DAHGCISLETVAK--PMTLLVVAERNQSTFVFTDCFKLNRDA 958

Query: 824  STMIACLDSLK--LLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSS 881
               I     LK  +LGN SL     R +   VS      S   PG+++P WF +Q  GSS
Sbjct: 959  QESIVAHTQLKSQILGNGSLQ----RNHKGLVSEPLA--SASFPGNDLPLWFRHQRMGSS 1012

Query: 882  ITVTRPSNLYNKKKLVGYAICCV 904
            +    P + +   K +G ++C V
Sbjct: 1013 METHLPPH-WCDDKFIGLSLCVV 1034


>gi|356502323|ref|XP_003519969.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1028

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 239/590 (40%), Positives = 357/590 (60%), Gaps = 41/590 (6%)

Query: 17  SDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS-SKGGLVSLQRQLLSQ 75
           SDV +IGI G+GG+GKTTI+R VY+LI  +FE + FL ++RE + +K GLV LQ  LLS+
Sbjct: 213 SDVNIIGIYGIGGIGKTTISRAVYNLICSQFEGTCFLLDIREKAINKQGLVQLQEMLLSE 272

Query: 76  LLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIIT 135
           +LK     + +V  GI ++  RL++KKVLLV+DDV  ++QL+ LAG   WFG+GS IIIT
Sbjct: 273 VLKKKHIKVGDVNRGIPIIKRRLEKKKVLLVLDDVDKLEQLKVLAGESRWFGNGSIIIIT 332

Query: 136 SRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPL 195
           +RD+HLL THGV ++Y    LN  +AL+LFN  AFK ++     V ++ R + YA G+PL
Sbjct: 333 TRDKHLLATHGVVKIYDVKPLNVAKALELFNWCAFKNHKADPLYVNIANRAVSYACGIPL 392

Query: 196 ALEVLGSFLSGRSVDEWRSTLE-----------------RLEIEPPSEILDILQISFDGL 238
           ALEV+GS L G+S++E  S LE                 + E  P  +I +IL++S+DGL
Sbjct: 393 ALEVIGSHLFGKSLNECNSALEGEPCLWAMGYECNSALDKYERIPHEKIHEILKVSYDGL 452

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDL 297
           +E EK+IFLDIACFF      YVT+ L   GFH   G+RVL+++ L+ +  +  + MHDL
Sbjct: 453 EENEKQIFLDIACFFNTCGVGYVTSVLRAHGFHVKDGLRVLVDRSLLKIDASGCVRMHDL 512

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           +++ G++IV+++S  E G+RSRLW EE++ HVL E+TGT+ +E I L+ Y   N + +  
Sbjct: 513 IRDTGREIVRQESTVEPGRRSRLWFEEDIVHVLEENTGTDKIEFIKLEGY---NNIQVQW 569

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
           + KA  +M NLR+L I N     G E+L N LR+L W  YP   LP++    K +E+ + 
Sbjct: 570 NGKALKEMKNLRILIIENTTFSTGPEHLPNSLRVLDWSCYPSPSLPADFN-PKRVELLLM 628

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
                ++++     + L V+ +   + L  +P     P L  L ++ CT L +I  S+  
Sbjct: 629 PESCLQIFQPYNMFESLSVLSIEDCQFLTDLPSLREVPLLAYLCIDNCTNLVKIDGSIGF 688

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
            +KL +L+ K C+ L  L   +++ SLE L+L+       G  CL +           FP
Sbjct: 689 LDKLQLLSAKRCSKLKILAPCVMLPSLEILDLR-------GCTCLDS-----------FP 730

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
           E++  ME++ E++L+ TAI  LP SI    GL LL+L+ C  L  LP ++
Sbjct: 731 EVLGKMENIKEIYLDETAIETLPCSIGNFVGLQLLSLRKCGRLHQLPGSI 780



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 61/106 (57%), Gaps = 1/106 (0%)

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
           SI  L  L LL+ K C  L+IL   V  L  L  L L GC+ L  FPE++  M+++ E++
Sbjct: 685 SIGFLDKLQLLSAKRCSKLKILAPCVM-LPSLEILDLRGCTCLDSFPEVLGKMENIKEIY 743

Query: 622 LDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL 667
           LD T+I+ +P SI     L+LL+L  C  L +LP SI  L  +K +
Sbjct: 744 LDETAIETLPCSIGNFVGLQLLSLRKCGRLHQLPGSICILPKVKVI 789



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 62/107 (57%), Gaps = 3/107 (2%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
           L  L +  C  L   P + R +  L+ L +D  T++ ++  SI  L KL+LL+   C  L
Sbjct: 645 LSVLSIEDCQFLTDLPSL-REVPLLAYLCIDNCTNLVKIDGSIGFLDKLQLLSAKRCSKL 703

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
            ++ +  + L SL+ L+L GC  L++ PE LG++E+++E+ +  TA+
Sbjct: 704 -KILAPCVMLPSLEILDLRGCTCLDSFPEVLGKMENIKEIYLDETAI 749



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 23/176 (13%)

Query: 619 ELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
           EL L   S  ++     +   L +L++ DC+ L  LPS +  +  L  L +  C  L  +
Sbjct: 624 ELLLMPESCLQIFQPYNMFESLSVLSIEDCQFLTDLPS-LREVPLLAYLCIDNCTNLVKI 682

Query: 679 PETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK-LPSLSGLCSLRKLNLTD 737
             ++G ++ L+ L                      ++   LK L     L SL  L+L  
Sbjct: 683 DGSIGFLDKLQLLS--------------------AKRCSKLKILAPCVMLPSLEILDLRG 722

Query: 738 CNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
           C  ++ + P  +G + ++KE+YL + +  +LP SI +   L  + L  C RL  LP
Sbjct: 723 CTCLD-SFPEVLGKMENIKEIYLDETAIETLPCSIGNFVGLQLLSLRKCGRLHQLP 777


>gi|27764539|gb|AAO23069.1| R 4 protein [Glycine max]
          Length = 895

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 269/717 (37%), Positives = 379/717 (52%), Gaps = 61/717 (8%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++S+  ++  L+D GS D V +IGI GMGGLGKTT+A  VY+LI+  F+ S FL NVRE 
Sbjct: 191 LESQVTEVMKLLDVGSDDLVHIIGIHGMGGLGKTTLALEVYNLIALHFDESCFLQNVREE 250

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  LLS+LL   D ++ +  +G   +  RLQRKKVLL++DDV   +QL+++
Sbjct: 251 SNKHGLKHLQSILLSKLLGEKDITLTSWQEGASTIQHRLQRKKVLLILDDVNKREQLKAI 310

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G  +WFG GSR+IIT+RD+HLLK H V+  Y+   LN++ ALQL    AFK  +     
Sbjct: 311 VGRPDWFGPGSRVIITTRDKHLLKCHEVERTYEVKVLNHNAALQLLTWNAFKREKIDPSY 370

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R++ YA GLPLALE++GS + G+SV  W S +E  +  P  EIL+IL++SFD L 
Sbjct: 371 EDVLNRVVTYASGLPLALEIIGSNMFGKSVAGWESAVEHYKRIPNDEILEILKVSFDALG 430

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFL----EGCGFHPVIGIRVLIEKCLITVHNNTLWMH 295
           E +K +FLDIA   KG     V + L    + C  H    I VL++K LI V +  + MH
Sbjct: 431 EEQKNVFLDIAFCLKGCKLTEVEHMLCSLYDNCMKH---HIDVLVDKSLIKVKHGIVEMH 487

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DL+Q +G++I +++SPEE GKR RLW  +++ HVL ++TGT  +E I LD      E  +
Sbjct: 488 DLIQVVGREIERQRSPEEPGKRKRLWLPKDIIHVLKDNTGTSKIEIICLDFSISYKEETV 547

Query: 356 CASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
             +  AF KM NL++L I N +   G  Y    LR+L W  YP  FLPSN      +   
Sbjct: 548 EFNENAFMKMENLKILIIRNGKFSKGPNYFPEGLRVLEWHRYPSNFLPSNFDPINLVICK 607

Query: 416 MCYSRIG--ELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
           +  S I   E     K L  L V+     + L ++PD +  PNL +L  E C  L  +  
Sbjct: 608 LPDSSIKSFEFHGSSKKLGHLTVLKFDRCKFLTQIPDVSDLPNLRELSFEDCESLVAVDD 667

Query: 474 SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKF 533
           S+    KL  L+   C  L + P          LNL S          L TL +S     
Sbjct: 668 SIGFLKKLKKLSAYGCRKLTSFP---------PLNLTS----------LETLQLSSCSSL 708

Query: 534 REFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCL 593
             FPEI+  ME++ EL L G  I+ LP S + L+GL LL L  C  ++ LP +++ +  L
Sbjct: 709 EYFPEILGEMENIRELRLTGLYIKELPFSFQNLTGLRLLALSGCGIVQ-LPCSLAMMPEL 767

Query: 594 RSLKLSGCSKLK---------KFPEIVRSMKDL---------SELFLDGTSIKEVPSSIE 635
            S     C++ +         K   I+ S   L          + FL G          +
Sbjct: 768 SSFYTDYCNRWQWIELEEGEEKLGSIISSKAQLFCATNCNLCDDFFLAG---------FK 818

Query: 636 LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD 692
               +  LNLS   N   LP     L+ L+TL++S C   E++ E  G    LE  D
Sbjct: 819 RFAHVGYLNLSG-NNFTILPEFFKELQFLRTLDVSDC---EHLQEIRGLPPILEYFD 871



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 107/264 (40%), Gaps = 55/264 (20%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
           L  LK   C  L + P+ V  + +L EL F D  S+  V  SI  L KL+ L+   C+ L
Sbjct: 628 LTVLKFDRCKFLTQIPD-VSDLPNLRELSFEDCESLVAVDDSIGFLKKLKKLSAYGCRKL 686

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPIN 711
              P   + L SL+TL LS C  LE  PE LG++E++ EL ++G  +         +P +
Sbjct: 687 TSFPP--LNLTSLETLQLSSCSSLEYFPEILGEMENIRELRLTGLYIKE-------LPFS 737

Query: 712 LMRKSVALKLPSLSGL------CSLRKLN------------------------------- 734
             +    L+L +LSG       CSL  +                                
Sbjct: 738 F-QNLTGLRLLALSGCGIVQLPCSLAMMPELSSFYTDYCNRWQWIELEEGEEKLGSIISS 796

Query: 735 ------LTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKR 788
                  T+CNL +    +       +  L LS N+F  LP     L  L  +++ DC+ 
Sbjct: 797 KAQLFCATNCNLCDDFFLAGFKRFAHVGYLNLSGNNFTILPEFFKELQFLRTLDVSDCEH 856

Query: 789 LQSLPQLPPNIRQVRVNGCASLVT 812
           LQ +  LPP +       C S  +
Sbjct: 857 LQEIRGLPPILEYFDARNCVSFTS 880


>gi|358348487|ref|XP_003638277.1| Cellulose synthase, partial [Medicago truncatula]
 gi|355504212|gb|AES85415.1| Cellulose synthase, partial [Medicago truncatula]
          Length = 1681

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 217/566 (38%), Positives = 329/566 (58%), Gaps = 25/566 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D+  ++   ++++ S++V  +GI GMGG GKTT A+ +Y+ I H F    F+ N+R++ 
Sbjct: 305 LDTHVQEAIQIIENQSNNVCSMGIWGMGGSGKTTTAKAIYNQIYHTFLYHHFIANIRQVC 364

Query: 61  SKG--GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            +G  G++ LQ QLL+ +L   +  I+N   GI  +  RL   K L+V+DDV  ++Q ++
Sbjct: 365 ERGDEGIIHLQEQLLANVLGF-NEKIYNTASGITTIEDRLSGIKALIVLDDVSTLEQAEA 423

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L GN +WFGSGS +I+TSRD  +L+   V        +   ++L+LF   AF+   P+++
Sbjct: 424 LCGNSKWFGSGSVLIVTSRDTRILRLLEVKYRLTMKEMVEGKSLELFCWHAFRQPSPIED 483

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             +LS  ++ Y GGLPLALE++GS L  R+  EWRS L + E  P   +  IL+IS+DGL
Sbjct: 484 FSELSRSVVAYCGGLPLALEIIGSMLHYRTKQEWRSVLSKFEKIPHYLMQQILKISYDGL 543

Query: 239 -QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHD 296
             ++ K +FLDI CFF G D+ YVT  L GCG    IGI VLIE+ L+ V  NNTL MH 
Sbjct: 544 MDDMVKAVFLDICCFFIGEDKAYVTEILNGCGLCADIGIAVLIERSLLKVEDNNTLGMHK 603

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           L++++G++IV+  S +E G+RSRLW  +++  VLTE+TG + VEG+VL +   +    +C
Sbjct: 604 LIRDMGREIVRESSAKEPGERSRLWFHDDIHDVLTENTGRKNVEGLVLKS---QRTGRVC 660

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            S ++F +M +LRLLK+  + L     YLS  LR + W+G+   ++P +      +   +
Sbjct: 661 FSTESFKRMKDLRLLKLDRVDLTGDYGYLSKELRWVHWKGFTFNYIPDDFHQGNLVVFEL 720

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
            +S I  +W   K L  LK++ LSHS  L   PDF+  PNLEKLI+  C  L EIHPS+ 
Sbjct: 721 THSNIKHVWNETKVLVNLKILNLSHSIYLESSPDFSKLPNLEKLIMNDCPCLSEIHPSIG 780

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
             N + ++N+K+C S                 L   P  I  LK L TL + G  K    
Sbjct: 781 DLNNIHLINLKNCIS-----------------LSKFPKNIFKLKSLKTLILLGCTKIGSL 823

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLS 562
            + +  ME L+EL    T ++ +  S
Sbjct: 824 EKDIVQMESLTELITNNTLVKEVVFS 849



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 2/107 (1%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNL 651
           L+ L LS    L+  P+  + + +L +L + D   + E+  SI  L  + L+NL +C +L
Sbjct: 738 LKILNLSHSIYLESSPDFSK-LPNLEKLIMNDCPCLSEIHPSIGDLNNIHLINLKNCISL 796

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
            + P +I  LKSLKTL L GC K+ ++ + + Q+ESL EL  + T V
Sbjct: 797 SKFPKNIFKLKSLKTLILLGCTKIGSLEKDIVQMESLTELITNNTLV 843


>gi|357469487|ref|XP_003605028.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355506083|gb|AES87225.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1340

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 254/736 (34%), Positives = 403/736 (54%), Gaps = 63/736 (8%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +++R ++++ ++D  SS+ + M+GI G GG+GKT  A  +Y+ I H+FEA+ FL NVRE 
Sbjct: 171 LNTRFKQVKSIIDINSSERICMLGIYGAGGIGKTQFALHIYNKIRHQFEAASFLANVREK 230

Query: 60  SSK--GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
           S++  GGL +LQR LL+++ + A     + F G   +  RL  K+VLL++DDV  VKQL+
Sbjct: 231 SNESIGGLENLQRTLLNEIGE-ATQVFGSSFRGSSEIKHRLSHKRVLLILDDVDSVKQLE 289

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVD-EVYKPHGLNYDEALQLFNMKAFKTYQPL 176
           SLAG  +WF SGS IIIT+RD  +L  H V  + YK   LN+ E+ +LF   AF   +P+
Sbjct: 290 SLAGGHDWFNSGSIIIITTRDIDILHKHDVKIKPYKLEELNHHESTELFCWYAFNMSRPV 349

Query: 177 QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
           +   ++S+  I YA G+PLAL V+GS L G+S++EW   L++    P +EI  +++IS+ 
Sbjct: 350 ENFEKISSHAISYAKGIPLALRVIGSNLKGKSIEEWDIELQKYRKVPDAEIQGVMEISYK 409

Query: 237 GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMH 295
           GL +L++KIFLDIACFFKG   DY    L+ C F+PV  IR    KCLITV  N  L MH
Sbjct: 410 GLSDLDQKIFLDIACFFKGERWDYAKRILDACDFYPV--IRAFNSKCLITVDENGLLQMH 467

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DL+Q++G++IV+++S    G+RSRLW  ++V  VL  + G+  VEG++            
Sbjct: 468 DLIQDMGREIVRKESTSNPGERSRLWSHKDVLDVLKGNLGSTKVEGMI------------ 515

Query: 356 CASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
                         +L + N    +G  YL N LRLL W+ YP K  P N    + ++  
Sbjct: 516 --------------ILIVRNTLFSSGPSYLPNNLRLLDWKCYPSKDFPLNFYPYRIVDFK 561

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           + +S +  L K  +  + L ++ LSHS+++ ++PD +GA NL    L+ C +L     S+
Sbjct: 562 LPHSSMI-LKKPFQIFEDLTLINLSHSQSITQVPDLSGAKNLRVFTLDKCHKLVRFDISI 620

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
                ++ L+  +CT L +   KI + SL+ L+                       KF  
Sbjct: 621 GFMPNMVYLSASECTELKSFVPKIYLPSLQVLSFNYCK------------------KFEY 662

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
           FP++++ M+   ++H+  TAI+  P SI  L+GL  +++  C+ L+ L  +   L  L +
Sbjct: 663 FPQVMQKMDKPLKIHMISTAIKEFPKSILNLTGLEYIDMSICKGLKDLSSSFLLLPRLVT 722

Query: 596 LKLSGCSKL----KKFPE---IVRSMKDLSELFLDGTSI--KEVPSSIELLTKLELLNLS 646
           LK+ GCS+L    ++F E   +     +L  L     ++  ++V + IE   KL  L +S
Sbjct: 723 LKIDGCSQLGQSFQRFNERHSVANKYSNLEALHFSEANLSDEDVNAIIENFPKLAYLKVS 782

Query: 647 DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYS 706
                V LP+ I     LK+L++S C  L  V E    I+ ++        +  S+  +S
Sbjct: 783 H-NGFVSLPNCIRGSMHLKSLDVSFCRNLTEVSELPLSIQKIDARHCKSLTLDASSVLWS 841

Query: 707 YIPINLMRKSVALKLP 722
            +   + R  V + +P
Sbjct: 842 KVSQEIQRIQVVMPMP 857



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 167/405 (41%), Gaps = 88/405 (21%)

Query: 561 LSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL 620
           +SI  +  +V L+   C  L+   V    L  L+ L  + C K + FP++++ M    ++
Sbjct: 618 ISIGFMPNMVYLSASECTELKSF-VPKIYLPSLQVLSFNYCKKFEYFPQVMQKMDKPLKI 676

Query: 621 FLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
            +  T+IKE P SI  LT LE +++S CK L  L SS + L  L TL + GC        
Sbjct: 677 HMISTAIKEFPKSILNLTGLEYIDMSICKGLKDLSSSFLLLPRLVTLKIDGC-------S 729

Query: 681 TLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNL 740
            LGQ                     S+   N  R SVA K  +L  L      + ++ NL
Sbjct: 730 QLGQ---------------------SFQRFN-ERHSVANKYSNLEAL------HFSEANL 761

Query: 741 MEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIR 800
            +  + + I N   L  L +S N FVSLP  I     L ++++  C+ L  + +LP +I+
Sbjct: 762 SDEDVNAIIENFPKLAYLKVSHNGFVSLPNCIRGSMHLKSLDVSFCRNLTEVSELPLSIQ 821

Query: 801 QVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHL 860
           ++    C SL                   LD+  +L +K             VS   Q +
Sbjct: 822 KIDARHCKSLT------------------LDASSVLWSK-------------VSQEIQRI 850

Query: 861 SVV--VPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCF- 917
            VV  +P  +IPEWF        ++      L+ + K    AI  VF  +K +   + F 
Sbjct: 851 QVVMPMPKRDIPEWF------DCVSSQEIPLLWARHKFPIVAIALVFQAVKKTDDVSKFF 904

Query: 918 -------GSYPTHQLNCHI---GHGIYGIGFRDKFGQAGSDHLWL 952
                  G    H +  H+   G    G+G   ++   G DH+ L
Sbjct: 905 DDINLLIGVKGWHTVGLHLFIDGQEFCGMGC--QYFIVGEDHVLL 947


>gi|449443196|ref|XP_004139366.1| PREDICTED: LOW QUALITY PROTEIN: protein SUPPRESSOR OF npr1-1,
           CONSTITUTIVE 1-like [Cucumis sativus]
          Length = 1253

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 261/703 (37%), Positives = 370/703 (52%), Gaps = 107/703 (15%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVREISSK-GGLVSLQRQLLSQLLKLADNSIWNVFDG 90
           KTT+A+ +Y+ I+++FE   FL NVRE S +  GLV LQ +LL ++LK  D  I N+   
Sbjct: 232 KTTLAKALYNKIANQFEGFCFLSNVRETSKQFNGLVQLQEKLLYEILKF-DLKIGNL--- 287

Query: 91  IDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEV 150
                       VL+V+DDV  +KQL++L G R+WFG GS+II+T+R+ HLL +H  DE 
Sbjct: 288 ----------DXVLIVLDDVDKLKQLEALVGERDWFGHGSKIIVTTRNSHLLSSHEFDEK 337

Query: 151 YKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVD 210
           Y    L++  +L+LF+  AFK   P    + LS R   Y  G PLAL VLGSFL  R   
Sbjct: 338 YGVRELSHGHSLELFSWHAFKKSHPSSNYLDLSKRATNYCKGHPLALVVLGSFLCTRDQI 397

Query: 211 EWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGF 270
           +WR+ L+  E     +I  I+QISFDGL+E  K+IFLDI+C F G   +YV + L  C  
Sbjct: 398 KWRTILDEFENSLSEDIEHIIQISFDGLEEKIKEIFLDISCLFVGEKVNYVKSVLNTC-- 455

Query: 271 HPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVL 330
                                        ++GQ+IV  +S E  GKRSRLW   +V  V 
Sbjct: 456 -----------------------------QMGQKIVNGESFEP-GKRSRLWLVHDVLKVF 485

Query: 331 TESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLR 390
            +++GT  V+ I LD     N   L   ++AF  M NLRLL + N +    +EYL + L+
Sbjct: 486 ADNSGTIAVKAIKLD---LSNPTRLDVDSRAFRNMKNLRLLIVRNARFSTNVEYLPDNLK 542

Query: 391 LLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD 450
            + W G+  +FLP +      + + + +S I  L KG K +  L  + LS+S  L ++PD
Sbjct: 543 WIKWHGFSHRFLPLSFLKKNLVGLDLRHSLIRNLGKGFKVIIYLPHVDLSYSSLLEKIPD 602

Query: 451 FTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKS------- 503
           F    NLE+L L  CT L  I  S++   KL+ L++  C++LI LP  +++KS       
Sbjct: 603 FPATSNLEELYLNNCTNLRTIPKSVVSLGKLLTLDLDHCSNLIKLPSYLMLKSLKVLKLA 662

Query: 504 ----LEKL------------------------------------------NLKSLPTTIS 517
               LEKL                                          NL+ LP+ ++
Sbjct: 663 YCKKLEKLPDFSTASNLEKLYLKECTNLRMIHDSIGSLSKLVTLDLGKCSNLEKLPSYLT 722

Query: 518 GLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKN 576
            LK L  L+++   K  E P+    + +L  L+LE  T +R +  SI  L+ LV L+L+ 
Sbjct: 723 -LKSLEYLNLAHCKKLEEIPDFSSAL-NLKSLYLEQCTNLRVIHESIGSLNSLVTLDLRQ 780

Query: 577 CRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIEL 636
           C +LE LP  +  LK LR  +LSGC KL+ FP+I  +MK L  L LD T+I+E+PSSI  
Sbjct: 781 CTNLEKLPSYL-KLKSLRHFELSGCHKLEMFPKIAENMKSLISLHLDSTAIRELPSSIGY 839

Query: 637 LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVP 679
           LT L +LNL  C NL+ LPS+I  L SL  L L  C  L+ +P
Sbjct: 840 LTALLVLNLHGCTNLISLPSTIYLLMSLWNLQLRNCKFLQEIP 882



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 163/561 (29%), Positives = 252/561 (44%), Gaps = 94/561 (16%)

Query: 532  KFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
            K  +FP       +L EL+L   T +R +P S+  L  L+ L+L +C +L  LP  +  L
Sbjct: 599  KIPDFPAT----SNLEELYLNNCTNLRTIPKSVVSLGKLLTLDLDHCSNLIKLPSYLM-L 653

Query: 591  KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCK 649
            K L+ LKL+ C KL+K P+   +  +L +L+L + T+++ +  SI  L+KL  L+L  C 
Sbjct: 654  KSLKVLKLAYCKKLEKLPDF-STASNLEKLYLKECTNLRMIHDSIGSLSKLVTLDLGKCS 712

Query: 650  NLVRLPSSIIALKSLKTLNLSGCFKLENVPE--TLGQIESLEELDISGTAVPHST--SWY 705
            NL +LPS  + LKSL+ LNL+ C KLE +P+  +   ++SL     +   V H +  S  
Sbjct: 713  NLEKLPS-YLTLKSLEYLNLAHCKKLEEIPDFSSALNLKSLYLEQCTNLRVIHESIGSLN 771

Query: 706  SYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLME----------------------G 743
            S + ++L + +   KLPS   L SLR   L+ C+ +E                       
Sbjct: 772  SLVTLDLRQCTNLEKLPSYLKLKSLRHFELSGCHKLEMFPKIAENMKSLISLHLDSTAIR 831

Query: 744  ALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
             LPS IG L +L  L L    + +SLP++I  L  L N++L +CK LQ +P LP  I+++
Sbjct: 832  ELPSSIGYLTALLVLNLHGCTNLISLPSTIYLLMSLWNLQLRNCKFLQEIPNLPHCIQKM 891

Query: 803  RVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSV 862
               GC  L    D +    S    +A  D               RE+             
Sbjct: 892  DATGCTLLGRSPDNIMDIISSKQDVALGD-------------FTREF------------- 925

Query: 863  VVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPT 922
            ++  + IPEWF YQ+  +SI V+   +L  ++ L  YA   V          + +     
Sbjct: 926  ILMNTGIPEWFSYQSISNSIRVSFRHDLNMERILATYATLQVV--------GDSYQGMAL 977

Query: 923  HQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVS 982
                  IG+ +    F  KF  + S++ WL+  S  T         ++LE  E NHV V 
Sbjct: 978  VSCKIFIGYRLQSC-FMRKFPSSTSEYTWLVTTSSPT-------FSTSLEMNEWNHVTVW 1029

Query: 983  FE--PWLGQGLEVKMCGLHPVYMDEVEELDQTTNQPSRFTVYNLNEFDQHFVGSKMIVAT 1040
            FE        + +K CG+H    +EV  +      P    VY +  FDQ        +  
Sbjct: 1030 FEVVKCSEATVTIKCCGVH--LTEEVHGIQNDVKGPG--VVYTV--FDQ--------LDK 1075

Query: 1041 TSKRSLTEYFGAEASGSGCCD 1061
               R + + FG E S    C+
Sbjct: 1076 LPSRDVIKSFGQEVSAKSDCN 1096


>gi|20197836|gb|AAM15274.1| disease resistance protein (TIR-NBS-LRR class), putative
           [Arabidopsis thaliana]
          Length = 972

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 260/712 (36%), Positives = 379/712 (53%), Gaps = 42/712 (5%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M +  EKL  L+   S +VRMIGI G  G+GKTTI R +Y+ +S  FE S F++N++ + 
Sbjct: 233 MGAHMEKLELLLCLDSCEVRMIGIWGPPGIGKTTIVRFLYNQLSSSFELSIFMENIKTMH 292

Query: 61  S-------KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDV 113
           +           + LQRQ LS++L   D  I      + +L  RL  KKVL+V+DDV   
Sbjct: 293 TILASSDDYSAKLILQRQFLSKILDHKDIEI----PHLRVLQERLYNKKVLVVLDDVDQS 348

Query: 114 KQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY 173
            QL +LA    WFG  SRI+IT++D  LLK H ++ +YK    N D+ALQ+F M AF   
Sbjct: 349 VQLDALAKETRWFGPRSRILITTQDRKLLKAHRINNIYKVDLPNSDDALQIFCMYAFGQK 408

Query: 174 QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
            P     +L+ ++    G  PL L V+GS+    S  EWR  + RL      +I  +L+ 
Sbjct: 409 TPYDGFYKLARKVTWLVGNFPLGLRVVGSYFREMSKQEWRKEIPRLRARLDGKIESVLKF 468

Query: 234 SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLW 293
           S+D L + +K +FL IACFF     + + +FL            VL EK LI++++N + 
Sbjct: 469 SYDALCDEDKDLFLHIACFFNHESIEKLEDFLGKTFLDIAQRFHVLAEKSLISINSNFVE 528

Query: 294 MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTEST-GTELVEGIVLDNYHHENE 352
           MHD L +LG++IV++QS  E G+R  L    ++  VL + T G   V GI LD   H N+
Sbjct: 529 MHDSLAQLGKEIVRKQSVREPGQRQFLVDARDISEVLADDTAGGRSVIGIYLD--LHRND 586

Query: 353 VYLCASAKAFSKMTNLRLLKICNLQ--------LPNGLEYLSNRLRLLGWRGYPLKFLPS 404
                S KAF  M+NL+ L++ N          LP+ L Y+S +LRLL W  +P+   PS
Sbjct: 587 DVFNISEKAFEGMSNLQFLRVKNFGNLFPAIVCLPHCLTYISRKLRLLDWMYFPMTCFPS 646

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
               +  +E+ M  S++ +LW+ I+ L  LK M L  S+NL  +PD + A NLE L L G
Sbjct: 647 KFNPEFLVELNMWGSKLEKLWEEIQPLRNLKRMDLFSSKNLKELPDLSSATNLEVLNLNG 706

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLST 524
           C+ L E+  S+    KL+ L +  C+SL+                  LP++I     L T
Sbjct: 707 CSSLVELPFSIGNATKLLKLELSGCSSLL-----------------ELPSSIGNAINLQT 749

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHLE-GTAIRGLPLSIELLSGLVLLNLKNCRSLEIL 583
           +D S      E P  + +  +L EL L   ++++ LP SI   + L  L+L  C SL+ L
Sbjct: 750 IDFSHCENLVELPSSIGNATNLKELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSLKEL 809

Query: 584 PVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLEL 642
           P ++ N   L+ L L+ CS L K P  + +  +L +L L G  S+ E+PS I   T L++
Sbjct: 810 PSSIGNCTNLKELHLTCCSSLIKLPSSIGNAINLEKLILAGCESLVELPSFIGKATNLKI 869

Query: 643 LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
           LNL     LV LPS I  L  L  L L GC KL+ +P  +  +E L ELD++
Sbjct: 870 LNLGYLSCLVELPSFIGNLHKLSELRLRGCKKLQVLPTNI-NLEFLNELDLT 920



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 161/324 (49%), Gaps = 31/324 (9%)

Query: 492 LITLPGKILMKSLEKLN-----LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHL 546
           +   P K   + L +LN     L+ L   I  L+ L  +D+      +E P++     +L
Sbjct: 641 MTCFPSKFNPEFLVELNMWGSKLEKLWEEIQPLRNLKRMDLFSSKNLKELPDL-SSATNL 699

Query: 547 SELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
             L+L G +++  LP SI   + L+ L L  C SL  LP ++ N   L+++  S C  L 
Sbjct: 700 EVLNLNGCSSLVELPFSIGNATKLLKLELSGCSSLLELPSSIGNAINLQTIDFSHCENLV 759

Query: 606 KFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSL 664
           + P  + +  +L EL L   +S+KE+PSSI   T L+ L+L  C +L  LPSSI    +L
Sbjct: 760 ELPSSIGNATNLKELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSLKELPSSIGNCTNL 819

Query: 665 KTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSL 724
           K L+L+ C  L  +P ++G   +LE+L ++G                       ++LPS 
Sbjct: 820 KELHLTCCSSLIKLPSSIGNAINLEKLILAGC-------------------ESLVELPSF 860

Query: 725 SGLCS-LRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIE 782
            G  + L+ LNL   + +   LPS IGNL  L EL L        LPT+I +L  L  ++
Sbjct: 861 IGKATNLKILNLGYLSCLV-ELPSFIGNLHKLSELRLRGCKKLQVLPTNI-NLEFLNELD 918

Query: 783 LEDCKRLQSLPQLPPNIRQVRVNG 806
           L DC  L++ P +  NI+++ + G
Sbjct: 919 LTDCILLKTFPVISTNIKRLHLRG 942


>gi|357500371|ref|XP_003620474.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495489|gb|AES76692.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1112

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 254/614 (41%), Positives = 347/614 (56%), Gaps = 56/614 (9%)

Query: 10  FLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKG-GLVSL 68
            L+DS    VR+IGICGMGG+GKT +A  +Y  ISH F AS F+D+V +I   G G +  
Sbjct: 68  LLLDSDDG-VRVIGICGMGGIGKTALAMTLYGQISHRFSASCFIDDVSKIYRSGDGPLDA 126

Query: 69  QRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGS 128
           Q+Q+L Q + +  N I N +   +++   L  ++ LL++D+V  V QL+ +A  REW G+
Sbjct: 127 QKQILLQTVGIEHNQICNHYSATNLMRINLCHERALLILDNVDQVGQLEKIAVRREWLGA 186

Query: 129 GSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQ-LSARII 187
           GSRIII SRDEH+LK +GVD VYK   LN  E+  LF  KAFK  + +    Q L+  I+
Sbjct: 187 GSRIIIISRDEHILKEYGVDVVYKVPLLNQAESHMLFCRKAFKVEKIIMSDYQNLADEIL 246

Query: 188 RYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFL 247
            YA GLPLA+ VLGSFL GR+V EW+S L RL   P + ++D+LQISFDGL   EK++FL
Sbjct: 247 NYAKGLPLAITVLGSFLFGRNVTEWKSALSRLRESPDNNVMDVLQISFDGLNLTEKEMFL 306

Query: 248 DIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQ 307
            IACFF       V N L  CGFH  IG+RVL++K LI++ N+ + MH LL+ELG++IVQ
Sbjct: 307 HIACFFNFLHEKRVKNILNSCGFHADIGLRVLLDKSLISIDNSIIKMHYLLEELGRKIVQ 366

Query: 308 RQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTN 367
             S +E  K SRLW  E++ +V+ E     L    +   Y H      C      SKM+N
Sbjct: 367 ESSSKEQRKWSRLWSHEQIYNVMMEKMVKFLFR--IKKTYFH-----FC-----LSKMSN 414

Query: 368 LRLLKICNL---------QLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
           LRLL I +          + PN    LSN+LR + W  YP K+LPS+    + +E+ +  
Sbjct: 415 LRLLIIISYGNYGGNVVSESPNC---LSNKLRYVEWLEYPFKYLPSSFHPYELVELILAR 471

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           S I +LW   K+L  L+ + LSHS NL+++ DF   PNLE L LE C  L E+ PS+ L 
Sbjct: 472 SSITQLWTNKKYLPNLRKLDLSHSINLVKIIDFGAFPNLEWLSLEECINLVELDPSIGLL 531

Query: 479 NKLIILNMKDCTSLITLPGKIL-MKSLEKLNLKSLPTTISGLKCLSTLDVSG-------- 529
            KL  LN+  C SL ++P  I  + SLE LN++           L   D+S         
Sbjct: 532 EKLSYLNLDGCYSLESIPNNIFSLSSLEDLNMRGCSKVFDDPMHLKKPDISESASQDSTD 591

Query: 530 ----------------DLKF---REFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLV 570
                           D+ F    + P+ +E +  L  L+L G     LP S+  LS LV
Sbjct: 592 TYLLPLLCRLYLLRTVDISFCRLSQVPDAIECLSSLERLNLGGNYFVTLP-SLWKLSKLV 650

Query: 571 LLNLKNCRSLEILP 584
            LNL++C  LE LP
Sbjct: 651 YLNLEHCELLESLP 664



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 163/357 (45%), Gaps = 65/357 (18%)

Query: 640 LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP 699
           LE L+L +C NLV L  SI  L+ L  LNL GC+ LE++P  +  + SLE+L++ G +  
Sbjct: 510 LEWLSLEECINLVELDPSIGLLEKLSYLNLDGCYSLESIPNNIFSLSSLEDLNMRGCS-- 567

Query: 700 HSTSWYSYIPINLMRKSVALKLPSLSGLCS-----------------LRKLNLTDCNLME 742
                       +    + LK P +S   S                 LR ++++ C L +
Sbjct: 568 -----------KVFDDPMHLKKPDISESASQDSTDTYLLPLLCRLYLLRTVDISFCRLSQ 616

Query: 743 GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI--- 799
             +P  I  L SL+ L L  N FV+LP S+  LSKL+ + LE C+ L+SLPQLP      
Sbjct: 617 --VPDAIECLSSLERLNLGGNYFVTLP-SLWKLSKLVYLNLEHCELLESLPQLPSPTTIG 673

Query: 800 RQVRVNGCASL-VTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTR- 857
           R  R N   +  + + +  KL +S+               +S+ FS + ++++A  ++  
Sbjct: 674 RDRRENKWWTTGLVIFNCPKLAESEREHC-----------RSMTFSWMAQFIKAYPHSYP 722

Query: 858 ---QHLSVVVPGSEIPEWFMYQNEGSSITVT-RPSNLYNKKKLVGYAICCVFHVLKNSRG 913
                  +VVPGSEIP W    + G SI +   P    N   ++G+  C VF V   +  
Sbjct: 723 AYLDEFHIVVPGSEIPNWINNHSMGDSIPIEFSPPMHDNINDIIGFVCCAVFSV---APP 779

Query: 914 NNCFGSYPTHQLNCHIGHGIYGIGFR------DKFGQAGSDHLWLLYLSRQTCYDIR 964
           ++ F  +    +      GI  I  +        F    S HLW++Y  R + ++ R
Sbjct: 780 DSIFTPWDPPWVRI---TGISDIKLKIPVIINGSFRTTKSSHLWIIYFPRGSRHEFR 833



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 65/142 (45%), Gaps = 26/142 (18%)

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK-------LKKFPEIVRSM 614
           SI LL  L  LNL  C SLE +P  + +L  L  L + GCSK       LKK P+I  S 
Sbjct: 527 SIGLLEKLSYLNLDGCYSLESIPNNIFSLSSLEDLNMRGCSKVFDDPMHLKK-PDISESA 585

Query: 615 KDLS----------------ELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSI 658
              S                 + +    + +VP +IE L+ LE LNL      V LP S+
Sbjct: 586 SQDSTDTYLLPLLCRLYLLRTVDISFCRLSQVPDAIECLSSLERLNLGG-NYFVTLP-SL 643

Query: 659 IALKSLKTLNLSGCFKLENVPE 680
             L  L  LNL  C  LE++P+
Sbjct: 644 WKLSKLVYLNLEHCELLESLPQ 665


>gi|356559997|ref|XP_003548282.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1420

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 270/716 (37%), Positives = 390/716 (54%), Gaps = 53/716 (7%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYD--LISHEFEASGFLDNVR 57
           ++SR   +R L+D+GS D V MIGI GMGGLGK+T+AR VY+  +I+ +F+   FL NVR
Sbjct: 196 LESRVLDVRRLLDAGSDDGVHMIGIHGMGGLGKSTLARAVYNELIIAEKFDGFCFLANVR 255

Query: 58  EISSK-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQL 116
           E S K  GL  LQR LLS++L   + S+ +   GI ++ SRL+ KKVLL++DDV    QL
Sbjct: 256 EKSDKKDGLEHLQRILLSEILGEKNISLTSTQQGISIIQSRLKGKKVLLILDDVNTHGQL 315

Query: 117 QSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
           Q++ G R+WFG GS+IIIT+RDE LL  H V+E Y+   LN  +ALQL    AFK  +  
Sbjct: 316 QAI-GRRDWFGPGSKIIITTRDEQLLAYHEVNETYEMKELNQKDALQLLTWNAFKKEKAD 374

Query: 177 QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
              V++  R++ YA GLPLALEV+GS L G+S++ W S +++ +  P  EILD+L +SFD
Sbjct: 375 PTYVEVLHRVVAYASGLPLALEVIGSHLVGKSIEAWESAIKQYKRIPKKEILDVLTVSFD 434

Query: 237 GLQELEKKIFLDIACFFKGNDRDYVTNFLEG----CGFHPVIGIRVLIEKCLITVH--NN 290
            L+E E+K+FLDIAC  KG     V + L G    C  H    I VL+EK LI V   + 
Sbjct: 435 ALEEEEQKVFLDIACCLKGWTLTEVEHILPGLYDDCMKH---NIGVLVEKSLIKVSWGDG 491

Query: 291 TLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHE 350
            + MHDL+Q++G++I Q++S +E GKR RLW  +++  VL +++GT  ++ I LD    E
Sbjct: 492 VVNMHDLIQDMGRRIDQQRSSKEPGKRRRLWLTKDIIQVLDDNSGTSEIQMISLDLSLSE 551

Query: 351 NEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK 410
            E  +  +  AF K+ NL++L I N +   G  Y    LR+L W GYP   LPSN    +
Sbjct: 552 KETTIDWNGNAFRKIKNLKILFIRNGKFSKGPNYFPESLRVLEWHGYPSNCLPSNFPPKE 611

Query: 411 TIEIYMCYSRIGEL-WKGI-KHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
            +   +  S I    + G  K   KLKV+   + + L  +PD +   NLE+L    C  L
Sbjct: 612 LVICKLSQSYITSFGFHGSRKKFRKLKVLKFDYCKILTEIPDVSVLVNLEELSFNRCGNL 671

Query: 469 YEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVS 528
             +H S+   NKL IL+   C+ L T P          LNL S          L  L +S
Sbjct: 672 ITVHHSIGFLNKLKILSAYGCSKLTTFP---------PLNLTS----------LEGLQLS 712

Query: 529 GDLKFREFPEIVEHMEH-LSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
                  FPEI+  M++ L         ++ LP+S + L GL  L L++C +  +    +
Sbjct: 713 ACSSLENFPEILGEMKNLLMLQLFGLLGVKELPVSFQNLVGLQSLILQDCENFLLPSNII 772

Query: 588 SNLKCLRSLKLSGCSKLK---------KFPEIVRSMKDLSELFLDGTSIKE--VPSSIEL 636
           + +  L SL    C  L+         K   IV S  D S    DG ++ +    +    
Sbjct: 773 AMMPKLSSLLAESCKGLQWVKSEEGEEKVGSIVCSNVDDSS--FDGCNLYDDFFSTGFMQ 830

Query: 637 LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE---NVPETLGQIESLE 689
           L  ++ L+L D  N   LP  +  L+ L  L++SGC +L+    VP  L +  + E
Sbjct: 831 LDHVKTLSLRD-NNFTFLPECLKELQFLTRLDVSGCLRLQEIRGVPPNLKEFMARE 885



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 141/344 (40%), Gaps = 79/344 (22%)

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
           SI  L+ L +L+   C  L   P    NL  L  L+LS CS L+ FPEI+  MK+L  L 
Sbjct: 677 SIGFLNKLKILSAYGCSKLTTFPPL--NLTSLEGLQLSACSSLENFPEILGEMKNLLMLQ 734

Query: 622 LDGT-SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL-KSLKTLNLSGCFKLENVP 679
           L G   +KE+P S + L  L+ L L DC+N + LPS+IIA+   L +L    C  L+ V 
Sbjct: 735 LFGLLGVKELPVSFQNLVGLQSLILQDCENFL-LPSNIIAMMPKLSSLLAESCKGLQWVK 793

Query: 680 ETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCS-LRKLNLTDC 738
              G+       +  G+ V                             CS +   +   C
Sbjct: 794 SEEGE-------EKVGSIV-----------------------------CSNVDDSSFDGC 817

Query: 739 NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPN 798
           NL +    +    L  +K L L  N+F  LP  +  L  L  +++  C RLQ +  +PPN
Sbjct: 818 NLYDDFFSTGFMQLDHVKTLSLRDNNFTFLPECLKELQFLTRLDVSGCLRLQEIRGVPPN 877

Query: 799 IRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQ 858
           +++     C                  +     S  +L N+ L  +   E+L        
Sbjct: 878 LKEFMAREC------------------ISLSSSSSSMLSNQELHEAGQTEFL-------- 911

Query: 859 HLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
                 PG+ IPEWF +Q+ G S      S+ + + K     +C
Sbjct: 912 -----FPGATIPEWFNHQSRGPS------SSFWFRNKFPDNVLC 944


>gi|298953299|gb|ADI99934.1| TIR-NBS-LRR-AAA+ATPase class resistance protein [Cucumis sativus]
          Length = 1178

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 322/953 (33%), Positives = 478/953 (50%), Gaps = 148/953 (15%)

Query: 13   DSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK-GGLVSLQRQ 71
            D+G   V M+G+ G+GG+GKTT+A+ +Y+ I+ +FEA  FL NVRE S +  GL  LQ  
Sbjct: 255  DTG---VYMVGLYGIGGIGKTTLAKALYNKIASQFEACCFLSNVREASKQFNGLAQLQET 311

Query: 72   LLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSR 131
            LL ++L + D  + N+  GI+++ +RL  KKVL+V+DDV  ++QL++L G R+WFG GSR
Sbjct: 312  LLYEILTV-DLKVINLDRGINIIRNRLCLKKVLIVLDDVDKLEQLEALVGGRDWFGQGSR 370

Query: 132  IIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAG 191
            II+T+R++HLL +HG DE+    GL+ DEA++LF+  AFK   P    + LS R   Y  
Sbjct: 371  IIVTTRNKHLLSSHGFDEMENILGLDEDEAIELFSWHAFKKNHPSSNYLDLSKRATSYCK 430

Query: 192  GLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIAC 251
            G  LAL VLGSFL  R   EW S            ILD          E E  +  DI  
Sbjct: 431  GHSLALVVLGSFLCTRDQVEWCS------------ILD----------EFENSLNKDI-- 466

Query: 252  FFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSP 311
                  +D +    +G                             L  ++G +IV  +S 
Sbjct: 467  ------KDILQLSFDG-----------------------------LEDKMGHKIVCGESL 491

Query: 312  EELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLL 371
            E LGKRSRLW  ++V  VL  ++GT+ V+GI LD     N   L    +AF KM NLRLL
Sbjct: 492  E-LGKRSRLWLVQDVWEVLVNNSGTDAVKGIKLD---FPNSTRLDVDPQAFRKMKNLRLL 547

Query: 372  KICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHL 431
             + N +    +EYL + L+ + W G+     PS   M   + + + +S I    K ++  
Sbjct: 548  IVQNARFSTKIEYLPDSLKWIKWHGFRQPTFPSFFTMKNLVGLDLQHSFIKTFGKRLEDC 607

Query: 432  DKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTS 491
            ++LK + LS+S  L ++P+F+ A NLE+L L  CT L  I  S+   +KL +LN+  C++
Sbjct: 608  ERLKYVDLSYSTFLEKIPNFSAASNLEELYLTNCTNLGMIDKSVFSLDKLTVLNLDGCSN 667

Query: 492  LITLP-GKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELH 550
            L  LP G  ++ SL+KLNL                      K  + P++     +L+ LH
Sbjct: 668  LKKLPRGYFMLSSLKKLNLSYCK------------------KLEKIPDL-SSASNLTSLH 708

Query: 551  L-EGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPE 609
            + E T +R +  S+  L  L  L LK C +L +   +  +LK L  L LSGC KL+ FP 
Sbjct: 709  IYECTNLRVIHESVGSLDKLEGLYLKQCTNL-VKLPSYLSLKSLLCLSLSGCCKLESFPT 767

Query: 610  IVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNL 669
            I ++MK L  L LD T+IKE+PSSI  LT+L  L L+ C NL+ LP++I  L+SL+ L L
Sbjct: 768  IAKNMKSLRTLDLDFTAIKELPSSIRYLTELWTLKLNGCTNLISLPNTIYLLRSLENLLL 827

Query: 670  SGCFKLENVPETLG-QIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLC 728
            SGC      P+     I+ +     S + +  +  W   +P  L    V  +  S   L 
Sbjct: 828  SGCSIFGMFPDKWNPTIQPV----CSPSKMMETALWSLKVPHFL----VPNESFSHFTLL 879

Query: 729  SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKR 788
             L+  N+++ N ++  +  D+     L +L LS+N F SLP+ +     L N+EL +CK 
Sbjct: 880  DLQSCNISNANFLD--ILCDVAPF--LSDLRLSENKFSSLPSCLHKFMSLWNLELRNCKF 935

Query: 789  LQSLPQLPPNIRQVRVNGCASLVTLLDALKLC---KSDSTMIACLDSLKLLGNKSLAFSM 845
            LQ +P LP +I+++   GC SL  + D +      K D TM          G  S     
Sbjct: 936  LQEIPSLPESIQKMDACGCESLSRIPDNIVDIISKKQDLTM----------GEIS----- 980

Query: 846  LREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
             RE+L             + G EIPEWF Y+   + ++ +       ++ L   A C  F
Sbjct: 981  -REFL-------------LTGIEIPEWFSYKTTSNLVSASFRHYPDMERTL---AACVSF 1023

Query: 906  HVLKNS--RGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLS 956
             V  NS  RG            N  + + +Y       F  + S+++WL+  S
Sbjct: 1024 KVNGNSSERGARI-------SCNIFVCNRLY-FSLSRPFLPSKSEYMWLVTTS 1068


>gi|227438219|gb|ACP30599.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 963

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 265/718 (36%), Positives = 391/718 (54%), Gaps = 51/718 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M +    +  LM    +DVRM+GI GMGG+GKTTIA+ +Y     EF  +  L+NV++  
Sbjct: 238 MSTHMRSIYPLMSKDPNDVRMVGIWGMGGIGKTTIAKYIYKGFLSEFYGACLLENVKKEF 297

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            + G   L+ ++LS++ +  D + WN     D++  RLQ KKVLLV+DDV D++QL+ LA
Sbjct: 298 KRHGPSHLREKILSEIFRKKDMNTWN--KDSDVMKQRLQGKKVLLVLDDVDDIQQLEELA 355

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G+ +WFG GSRI+IT+RD  +L  H V+ +Y+   L   +ALQLF+  AFK  +P ++  
Sbjct: 356 GSSDWFGPGSRIVITTRDRRVLDQHDVERIYEVKPLRTTQALQLFSKHAFKQPRPSEDYR 415

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS  ++   GGLPLA++V+G  L  R +  W   L+ L     +     L++S++ L E
Sbjct: 416 ELSLDVVEQLGGLPLAIQVVGGSLYRRELKFWEDKLDLLRNNGDNSAFKALKVSYEALDE 475

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGC---GFHPVIGIR----VLIEKCLITVHNNT-L 292
           +EKKIFL +A  F G   D V   L+ C       V+  R     L+EKC+I++  N  L
Sbjct: 476 IEKKIFLYVALCFNGVYMDRVRKVLDLCFVSSRRRVLPTRPSIVALMEKCMISLSKNKLL 535

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTEL--VEGIVLDNYHHE 350
           W+HDLLQ++ ++I+     E   KR  LW  E++ HV + + G E   VE I LD     
Sbjct: 536 WVHDLLQDMAEEIICEGKDERPWKRLMLWDFEDINHVFSTNMGDEAIDVESIFLD-MSEG 594

Query: 351 NEVYLCASAKAFSKMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFL 402
           NE  L  +   F KM NL+LL+            ++ +GLEYL   LR L W  Y LK L
Sbjct: 595 NE--LSITPGIFKKMPNLKLLEFYTNSSVEESRTRMLDGLEYLPT-LRYLHWDAYHLKSL 651

Query: 403 PSNLQMDKTIEIYMCYSRIGELWKGIKH-LDKLKVMILSHSENLIRMPDFTGAPNLEKLI 461
           P        +E+ + +S I  +W G +  L  L+ + L   ++L   PD + A NLE L 
Sbjct: 652 PPQFCTSFLVELNLSHSSIQTVWSGSQQDLGNLRSLNLISCKHLNEFPDLSKATNLESLK 711

Query: 462 LEGCTRLYEIHPSLLLH-NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLK 520
           L  C  L EI  S L   NKL+   + +C                  NLKSLP  I+ LK
Sbjct: 712 LSNCDNLVEIPDSSLRQLNKLVHFKLSNCK-----------------NLKSLPNNIN-LK 753

Query: 521 CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL 580
            L +L ++G     EFP I E +E   +L L  T+I+ +P SIE L+ L  ++L  C+ L
Sbjct: 754 SLRSLHLNGCSSLEEFPFISETVE---KLLLNETSIQQVPPSIERLTRLRDIHLSGCKRL 810

Query: 581 EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
             LP  + NLK L  L L+ C  +  FPE+ RS++ L+   L+ T I+EVP +I   ++L
Sbjct: 811 MNLPECIKNLKFLNDLGLANCPNVISFPELGRSIRWLN---LNKTGIQEVPLTIGDKSEL 867

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
             LN+S C  L+ LP ++  L  LK LNL GC  +   P   G  ++++ LD+ GT++
Sbjct: 868 RYLNMSGCDKLMTLPPTVKKLGQLKYLNLRGCVNVTESPNLAGG-KTMKALDLHGTSI 924



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 150/316 (47%), Gaps = 59/316 (18%)

Query: 488 DCTSLITLPGKILMKSLEKLNLK--SLPTTISG----LKCLSTLDVSGDLKFREFPEIVE 541
           D   L +LP +     L +LNL   S+ T  SG    L  L +L++       EFP++ +
Sbjct: 644 DAYHLKSLPPQFCTSFLVELNLSHSSIQTVWSGSQQDLGNLRSLNLISCKHLNEFPDLSK 703

Query: 542 HMEHLSELHLEG--TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
              +L  L L      +     S+  L+ LV   L NC++L+ LP  + NLK LRSL L+
Sbjct: 704 -ATNLESLKLSNCDNLVEIPDSSLRQLNKLVHFKLSNCKNLKSLPNNI-NLKSLRSLHLN 761

Query: 600 GCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSII 659
           GCS L++FP I  +++   +L L+ TSI++VP SIE LT+L  ++LS CK L+ LP  I 
Sbjct: 762 GCSSLEEFPFISETVE---KLLLNETSIQQVPPSIERLTRLRDIHLSGCKRLMNLPECIK 818

Query: 660 ALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVAL 719
            LK L  L L+ C  + + PE LG+  S+  L+++ T +         +P+ +  KS   
Sbjct: 819 NLKFLNDLGLANCPNVISFPE-LGR--SIRWLNLNKTGIQE-------VPLTIGDKS--- 865

Query: 720 KLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLL 779
                     LR LN++ C+                          ++LP ++  L +L 
Sbjct: 866 ---------ELRYLNMSGCD------------------------KLMTLPPTVKKLGQLK 892

Query: 780 NIELEDCKRLQSLPQL 795
            + L  C  +   P L
Sbjct: 893 YLNLRGCVNVTESPNL 908



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 118/285 (41%), Gaps = 75/285 (26%)

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
           +E++  L  LH +   ++ LP      S LV LNL +     +   +  +L  LRSL L 
Sbjct: 632 LEYLPTLRYLHWDAYHLKSLPPQF-CTSFLVELNLSHSSIQTVWSGSQQDLGNLRSLNLI 690

Query: 600 GCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP-SSI 658
            C  L +FP++ ++                        T LE L LS+C NLV +P SS+
Sbjct: 691 SCKHLNEFPDLSKA------------------------TNLESLKLSNCDNLVEIPDSSL 726

Query: 659 IALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVA 718
             L  L    LS C  L+++P  +                                    
Sbjct: 727 RQLNKLVHFKLSNCKNLKSLPNNIN----------------------------------- 751

Query: 719 LKLPSLSGLCSLRKLNLTDCN-LMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSK 777
                   L SLR L+L  C+ L E    S+     ++++L L++ S   +P SI  L++
Sbjct: 752 --------LKSLRSLHLNGCSSLEEFPFISE-----TVEKLLLNETSIQQVPPSIERLTR 798

Query: 778 LLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKS 822
           L +I L  CKRL +LP+   N++ +   G A+   ++   +L +S
Sbjct: 799 LRDIHLSGCKRLMNLPECIKNLKFLNDLGLANCPNVISFPELGRS 843


>gi|27764546|gb|AAO23076.1| R 1 protein [Glycine max]
          Length = 902

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 264/707 (37%), Positives = 379/707 (53%), Gaps = 49/707 (6%)

Query: 11  LMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQ 69
           L+D GS D V +IGI GMGGLGKTT+A  VY+ I+  F+ S FL NVRE S+K GL   Q
Sbjct: 201 LLDVGSDDLVHIIGIHGMGGLGKTTLALAVYNFIALHFDESCFLQNVREESNKHGLKHFQ 260

Query: 70  RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG 129
             LLS+LL   D ++ +  +G  M+  RL+RKKVLL++DDV   +QL+++ G  +WFG G
Sbjct: 261 SILLSKLLGEKDITLTSWQEGASMIQHRLRRKKVLLILDDVDKREQLEAIVGRSDWFGPG 320

Query: 130 SRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ--PLQECVQLSARII 187
           SR+IIT+RD+HLLK H V+  Y+   LN++ ALQL    AFK  +  P+ + V    R++
Sbjct: 321 SRVIITTRDKHLLKYHEVERTYEVKVLNHNAALQLLTWNAFKREKIDPIYDDVL--NRVV 378

Query: 188 RYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFL 247
            YA GLPLALEV+GS L G++V EW S +E  +  P  EIL IL++SFD L E +K +FL
Sbjct: 379 TYASGLPLALEVIGSDLFGKTVAEWESAVEHYKRIPSDEILKILKVSFDALGEEQKNVFL 438

Query: 248 DIACFFKGND----RDYVTNFLEGCGFHPVIGIRVLIEKCLITVH---NNTLWMHDLLQE 300
           DIAC FKG       D +  F   C  H    I VL+EK LI ++   + T+ MHDL+Q+
Sbjct: 439 DIACCFKGYKWTEVDDILRAFYGNCKKH---HIGVLVEKSLIKLNCYDSGTVEMHDLIQD 495

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G++I +++SPEE  K  RLW  +++  VL  +TGT  +E I LD    + E  +  +  
Sbjct: 496 MGREIERQRSPEEPWKCKRLWSPKDIFQVLKHNTGTSKIEIICLDFSISDKEETVEWNEN 555

Query: 361 AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
           AF KM NL++L I N +   G  Y    L +L W  YP   LP N   +  +   +  S 
Sbjct: 556 AFMKMENLKILIIRNGKFSKGPNYFPEGLTVLEWHRYPSNCLPYNFHPNNLLICKLPDSS 615

Query: 421 IGEL-WKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
           I      G      L V+     E L ++PD +  PNL++L  + C  L  +  S+   N
Sbjct: 616 ITSFELHGPSKFWHLTVLNFDQCEFLTQIPDVSDLPNLKELSFDWCESLIAVDDSIGFLN 675

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
           KL  L+   C  L + P          LNL S          L TL +SG      FPEI
Sbjct: 676 KLKKLSAYGCRKLRSFP---------PLNLTS----------LETLQLSGCSSLEYFPEI 716

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
           +  ME++  L L+G  I+ LP S + L GL  L L +C  ++ LP +++ +  L   ++ 
Sbjct: 717 LGEMENIKALDLDGLPIKELPFSFQNLIGLCRLTLNSCGIIQ-LPCSLAMMPELSVFRIE 775

Query: 600 GCSKL-----KKFPEIVRSMKDLSELFLDGTSIKEVP----SSIELLTKLELLNLSDCKN 650
            C++      ++  E V SM    EL+    +         +  +  T++E L+LS   N
Sbjct: 776 NCNRWHWVESEEGEEKVGSMISSKELWFIAMNCNLCDDFFLTGSKRFTRVEYLDLSG-NN 834

Query: 651 LVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA 697
              LP     L+ L+ L +S C   E++ E  G   +LE  D    A
Sbjct: 835 FTILPEFFKELQFLRALMVSDC---EHLQEIRGLPPNLEYFDARNCA 878



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 114/257 (44%), Gaps = 41/257 (15%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
           L  L    C  L + P+ V  + +L EL  D   S+  V  SI  L KL+ L+   C+ L
Sbjct: 630 LTVLNFDQCEFLTQIPD-VSDLPNLKELSFDWCESLIAVDDSIGFLNKLKKLSAYGCRKL 688

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPIN 711
              P   + L SL+TL LSGC  LE  PE LG++E+++ LD+ G  +      +  + I 
Sbjct: 689 RSFPP--LNLTSLETLQLSGCSSLEYFPEILGEMENIKALDLDGLPIKELPFSFQNL-IG 745

Query: 712 LMRKSV----ALKLP-SLSGLCSLRKLNLTDCNLMEGALPSD----IGNLCSLKELY--- 759
           L R ++     ++LP SL+ +  L    + +CN        +    +G++ S KEL+   
Sbjct: 746 LCRLTLNSCGIIQLPCSLAMMPELSVFRIENCNRWHWVESEEGEEKVGSMISSKELWFIA 805

Query: 760 ------------------------LSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQL 795
                                   LS N+F  LP     L  L  + + DC+ LQ +  L
Sbjct: 806 MNCNLCDDFFLTGSKRFTRVEYLDLSGNNFTILPEFFKELQFLRALMVSDCEHLQEIRGL 865

Query: 796 PPNIRQVRVNGCASLVT 812
           PPN+       CASL +
Sbjct: 866 PPNLEYFDARNCASLTS 882


>gi|297791059|ref|XP_002863414.1| hypothetical protein ARALYDRAFT_494346 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309249|gb|EFH39673.1| hypothetical protein ARALYDRAFT_494346 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1170

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 266/732 (36%), Positives = 384/732 (52%), Gaps = 68/732 (9%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV-----REISSKGG------ 64
           S +VRM+GI G  G+GKTTIAR +++ +S  F+ S F+D       REI S         
Sbjct: 200 SEEVRMVGIWGSSGIGKTTIARALFNQLSRNFQVSKFIDRAFVYKSREIYSGANPDDHNM 259

Query: 65  LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNRE 124
            ++LQ   LS++L++ D  I    D + +LG RLQ +KVL+++DD+ D   L SL G  +
Sbjct: 260 KLNLQESFLSEILRMPDIKI----DHLGVLGERLQHQKVLIIVDDLDDQVILDSLVGQTQ 315

Query: 125 WFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSA 184
           WFGSGSRII+ + ++H L+ HG+D +Y+      + A+ +    AF+   P +    L  
Sbjct: 316 WFGSGSRIIVVTNNKHFLRAHGIDHIYELSLPTEEHAVAMLCQSAFRKKSPPEGFEMLVV 375

Query: 185 RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELE-K 243
           ++ R+AG LPL L VLGS L GR  + W   L RL+     +I  IL+IS+DGL   E +
Sbjct: 376 QVARHAGSLPLGLNVLGSCLRGRDKEYWVDMLPRLQNSLDDKIEKILRISYDGLGSAEDQ 435

Query: 244 KIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQ 303
            IF  IAC F   D   + + L        +G++ L++K LI V    + MH LLQE+GQ
Sbjct: 436 AIFRHIACIFNHMDVTTIKSLLADSKLGVNVGLQNLVDKSLIHVRWGHVEMHRLLQEMGQ 495

Query: 304 QIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFS 363
            IV+ QS ++LGKR  L    ++C VL+E   T  V GI L+    +    LC    AF 
Sbjct: 496 NIVRTQSIDKLGKREFLVDPNDICDVLSEGIDTRKVLGISLETSKIDQ---LCVHKSAFK 552

Query: 364 KMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
            M NLR LKI          L LP    YL   L+LL W  +P++ +PSN + +  +++ 
Sbjct: 553 GMRNLRFLKIGTDIFGEENRLDLPESFNYLPPTLKLLCWSEFPMRCMPSNFRPENLVKLK 612

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           M  S++ +LW G+  L  LK M L  S NL  +PD + A NLE L L  C  L E+ PS 
Sbjct: 613 MPNSKLHKLWDGVVPLTCLKEMDLDGSVNLKEIPDLSMATNLETLELGNCKSLVEL-PSF 671

Query: 476 LLH-NKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLP---TTISGLKCLST- 524
           + + NKL+ LNM+ C +L TLP    +KSL  LN      L++ P   T IS L    T 
Sbjct: 672 IRNLNKLLKLNMEFCNNLKTLPTGFNLKSLGLLNFRYCSELRTFPEISTNISDLYLTGTN 731

Query: 525 -LDVSGDLKFREFPEIVEHMEH----------------------LSELHLEGT-AIRGLP 560
             ++  +L      E+    E                       L+ LHL+   ++  LP
Sbjct: 732 IEELPSNLHLENLVELSISKEESDGKQWEGVKPLTPLLAMLSPTLTSLHLQNIPSLVELP 791

Query: 561 LSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL 620
            S + L+ L  L++ NCR+LE LP  + NL+ L SL   GCS+L+ FPEI     ++S L
Sbjct: 792 SSFQNLNNLESLDITNCRNLETLPTGI-NLQSLYSLSFKGCSRLRSFPEI---STNISSL 847

Query: 621 FLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
            LD T I+EVP  IE  + L LL++  C  L  +   I  LK L  ++   C +L  V +
Sbjct: 848 NLDETGIEEVPWWIENFSNLGLLSMDRCSRLKCVSLHISKLKHLGKVDFKDCGELTRV-D 906

Query: 681 TLGQIESLEELD 692
             G    +EE++
Sbjct: 907 LSGYPSGMEEME 918



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 125/506 (24%), Positives = 217/506 (42%), Gaps = 117/506 (23%)

Query: 496  PGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-T 554
            P  ++   +    L  L   +  L CL  +D+ G +  +E P++     +L  L L    
Sbjct: 605  PENLVKLKMPNSKLHKLWDGVVPLTCLKEMDLDGSVNLKEIPDL-SMATNLETLELGNCK 663

Query: 555  AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
            ++  LP  I  L+ L+ LN++ C +L+ LP T  NLK L  L    CS+L+ FPEI    
Sbjct: 664  SLVELPSFIRNLNKLLKLNMEFCNNLKTLP-TGFNLKSLGLLNFRYCSELRTFPEI---S 719

Query: 615  KDLSELFLDGTSIKEVPSSIELLTKLEL-------------------------------L 643
             ++S+L+L GT+I+E+PS++ L   +EL                               L
Sbjct: 720  TNISDLYLTGTNIEELPSNLHLENLVELSISKEESDGKQWEGVKPLTPLLAMLSPTLTSL 779

Query: 644  NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTS 703
            +L +  +LV LPSS   L +L++L+++ C  LE +P  +  ++SL  L   G +   S  
Sbjct: 780  HLQNIPSLVELPSSFQNLNNLESLDITNCRNLETLPTGI-NLQSLYSLSFKGCSRLRS-- 836

Query: 704  WYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKN 763
                              P +S   ++  LNL +  + E  +P  I N  +L  L + + 
Sbjct: 837  -----------------FPEIS--TNISSLNLDETGIEE--VPWWIENFSNLGLLSMDRC 875

Query: 764  SFVS-LPTSITHLSKLLNIELEDCKRLQ--SLPQLPPNIRQVRVNGCASLVTLLDALKLC 820
            S +  +   I+ L  L  ++ +DC  L    L   P  + ++           +DA+   
Sbjct: 876  SRLKCVSLHISKLKHLGKVDFKDCGELTRVDLSGYPSGMEEMEA-------VKIDAVSKV 928

Query: 821  KSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEG- 879
            K D      LD   +L  +S+ F  +                ++PG ++P +F Y+  G 
Sbjct: 929  KLDFRDCFNLDPETVLHQESIVFKYM----------------LLPGEQVPSYFTYRTTGV 972

Query: 880  SSITVT-RPSNLYNK--KKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGI 936
            SS+T+   P++L +   +  VG  +  V H      G N        ++ C         
Sbjct: 973  SSLTIPLLPTHLSHPFFRFRVGAVVTNVIH------GKNM-------EVKCE-------- 1011

Query: 937  GFRDKFGQA---GSD-HLWLLYLSRQ 958
             F+++FG +   GSD +++LL+   Q
Sbjct: 1012 -FKNRFGNSFHVGSDFYVYLLFTKSQ 1036


>gi|297850936|ref|XP_002893349.1| hypothetical protein ARALYDRAFT_889995 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297339191|gb|EFH69608.1| hypothetical protein ARALYDRAFT_889995 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1401

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 278/858 (32%), Positives = 445/858 (51%), Gaps = 95/858 (11%)

Query: 1    MDSRCEKLRFLMD-SGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            ++S  E L  L+D   +S V+ +G+ GMGG+GKTT+A+  Y+ I   F+   F+++VRE 
Sbjct: 201  LESCVEDLMKLLDFESTSGVQTLGLYGMGGIGKTTLAKSFYNKIIVNFKHRVFIESVREK 260

Query: 60   SS-KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            SS + GLV+LQ+ L+ +L  L    I +V  G++ +   +  KK ++V+DDV  + Q+ +
Sbjct: 261  SSDQDGLVNLQKTLIKELFGLVP-EIEDVSRGLEKIEENVHEKKTIVVLDDVDHIDQVNA 319

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            L G  +W+G GS I+IT+RD  +L    V++ Y+   L   +AL+LF+  + +  +P + 
Sbjct: 320  LVGETKWYGEGSLIVITTRDSEILSKLSVNQQYEVKCLTEPQALKLFSYHSLRKEKPPKN 379

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             ++LS +I+R  G LPLA+EV GS L  +  +EW   LE+L    P ++  +L +SF+ L
Sbjct: 380  LLELSTKIVRILGLLPLAVEVFGSHLYDKDENEWPVELEKLTNTQPDKLHCVLALSFESL 439

Query: 239  QELEKKIFLDIACFFKGND--RDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMH 295
             + EKKIFLDIAC F   +  +D + + L+GCGF+    +RVLI+K L+T+  ++TLWMH
Sbjct: 440  DDEEKKIFLDIACLFLKMEITKDELVDILKGCGFNAEAALRVLIQKSLVTIMKDDTLWMH 499

Query: 296  DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD---------- 345
            D ++++G+Q+V R+  ++   +SRLW   E+ +VL    GT  + GIV D          
Sbjct: 500  DQIRDMGRQMVLRECSDDPEMQSRLWDRGEIMNVLDYMKGTSSIRGIVFDFKKKFVRDPT 559

Query: 346  -------------------NYHHENEVYLCASAK-----------AFSKMTNLRLLKICN 375
                               NY     +   A  K            F  M  LRLL+I N
Sbjct: 560  ADEIVSRNLRNNPGLNFVCNYLRNIFIRFRAEEKPKRSEITIPVEPFVPMKKLRLLQINN 619

Query: 376  LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK--TIEIYMCYSRIGELWKGIKHLDK 433
            ++L   L+ L + L+ + W+G PL+ LP ++   +   +++     R  +     K  + 
Sbjct: 620  VELEGNLKLLPSELKWIQWKGCPLENLPPDILARQLGVLDLSESGIRRVQTLPSKKVDEN 679

Query: 434  LKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLI 493
            LKV+ L    +L  +PD +    LEKL+ E C  L ++  S+    KL+ L+++ C+   
Sbjct: 680  LKVINLRGCHSLKAIPDLSNHKALEKLVFERCNLLVKVPRSVGNLRKLLQLDLRRCSK-- 737

Query: 494  TLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG 553
                           L      +SGLKCL  L +SG       PE +  M  L EL L+G
Sbjct: 738  ---------------LSEFLVDVSGLKCLEKLFLSGCSNLSVLPENIGSMPCLKELLLDG 782

Query: 554  TAIRGLPLSIELLSGLVLLNLKNCRS-----------------------LEILPVTVSNL 590
            TAI  LP SI  L  L  L+L  CRS                       L  LP+++ +L
Sbjct: 783  TAISNLPDSIFRLQKLEKLSLMGCRSIQELPSCLGKLTSLEDLYLDDTALRNLPISIGDL 842

Query: 591  KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKN 650
            K L+ L L  C+ L K P+ +  +  L ELF++G++++E+P     L  L+ L+  DCK+
Sbjct: 843  KNLQKLHLMRCTSLSKIPDTINKLISLKELFINGSAVEELPLVTGSLLCLKDLSAGDCKS 902

Query: 651  LVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDI----SGTAVPHSTSWYS 706
            L ++PSSI  L  L  L L+    +E++PE +G +  + +L++    S  A+P S     
Sbjct: 903  LKQVPSSIGGLNFLLQLQLNST-PIESLPEEIGDLHFIRQLELRNCKSLKALPESIGKMD 961

Query: 707  YIPINLMRKSVALKLPSLSG-LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSF 765
             +    +  S   KLP   G L  L  L + +C  ++  LP   G+L SL+ LY+ +   
Sbjct: 962  TLHNLYLEGSNIEKLPKDFGKLEKLVVLRMNNCEKLK-RLPESFGDLKSLRHLYMKETLV 1020

Query: 766  VSLPTSITHLSKLLNIEL 783
              LP S  +LSKL+ +E+
Sbjct: 1021 SELPESFGNLSKLMVLEM 1038



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 152/550 (27%), Positives = 254/550 (46%), Gaps = 87/550 (15%)

Query: 419  SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGA-PNLEKLILEGCTRLYEIHPSLLL 477
            S++ E    +  L  L+ + LS   NL  +P+  G+ P L++L+L+G T +  +  S+  
Sbjct: 736  SKLSEFLVDVSGLKCLEKLFLSGCSNLSVLPENIGSMPCLKELLLDG-TAISNLPDSIFR 794

Query: 478  HNKLIILNMKDCTSLITLP---GKILMKSLEKL-----NLKSLPTTISGLKCLSTLDVSG 529
              KL  L++  C S+  LP   GK  + SLE L      L++LP +I  LK L  L +  
Sbjct: 795  LQKLEKLSLMGCRSIQELPSCLGK--LTSLEDLYLDDTALRNLPISIGDLKNLQKLHLMR 852

Query: 530  DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL--------- 580
                 + P+ +  +  L EL + G+A+  LPL    L  L  L+  +C+SL         
Sbjct: 853  CTSLSKIPDTINKLISLKELFINGSAVEELPLVTGSLLCLKDLSAGDCKSLKQVPSSIGG 912

Query: 581  --------------EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS 626
                          E LP  + +L  +R L+L  C  LK  PE +  M  L  L+L+G++
Sbjct: 913  LNFLLQLQLNSTPIESLPEEIGDLHFIRQLELRNCKSLKALPESIGKMDTLHNLYLEGSN 972

Query: 627  IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIE 686
            I+++P     L KL +L +++C+ L RLP S   LKSL+ L +     +  +PE+ G + 
Sbjct: 973  IEKLPKDFGKLEKLVVLRMNNCEKLKRLPESFGDLKSLRHLYMKETL-VSELPESFGNLS 1031

Query: 687  SLEELD--------ISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDC 738
             L  L+        IS +  P ++    ++ +            S S L SL +L+    
Sbjct: 1032 KLMVLEMLKKPLFRISESNAPGTSEEPRFVEVP----------NSFSNLTSLEELDACSW 1081

Query: 739  NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPN 798
             +  G +P D+  L SL +L L  N F SLP+S+  LS L  + L DC+ L+ LP LP  
Sbjct: 1082 RI-SGKIPDDLEKLSSLMKLNLGNNYFHSLPSSLVGLSNLQELSLRDCRELKRLPPLPCK 1140

Query: 799  IRQVRVNGCASL--------VTLLDALKLCKSDSTM-------IACLDSLKLLG-NKSLA 842
            +  + +  C SL        +T+L+ L L      +       +  L  L + G N + +
Sbjct: 1141 LEHLNMANCFSLESVSDLSELTILEDLNLTNCGKVVDIPGLEHLMALKRLYMTGCNSNYS 1200

Query: 843  FSMLREYLEAVSNTRQHL--------SVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKK 894
             ++ +   + +  T Q+L        ++ +PG+ +P+WF   ++G      +P+     K
Sbjct: 1201 LAVKKRLSKVIPRTSQNLRASLKMLRNLSLPGNRVPDWF---SQGPVTFSAQPN-----K 1252

Query: 895  KLVGYAICCV 904
            +L G  I  V
Sbjct: 1253 ELRGVIIAVV 1262


>gi|351723127|ref|NP_001236756.1| candidate disease-resistance protein SR1 [Glycine max]
 gi|37780302|gb|AAO92748.1| candidate disease-resistance protein SR1 [Glycine max]
          Length = 1137

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 323/1019 (31%), Positives = 476/1019 (46%), Gaps = 196/1019 (19%)

Query: 1    MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            + S+  ++R L+D GS DV  +IGI GMGGLGKTT+A  VY+LI+  F+ S FL NVRE 
Sbjct: 191  LGSQVIEVRKLLDVGSDDVVHIIGIHGMGGLGKTTLAVAVYNLIAPHFDESCFLQNVREE 250

Query: 60   SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            S+   L  LQ  LLS+LL   D ++ +  +G  M+  RL+RKKVLL++DDV   +QL+++
Sbjct: 251  SN---LKHLQSSLLSKLLGEKDITLTSWQEGASMIQHRLRRKKVLLILDDVDKREQLKAI 307

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ--PLQ 177
             G  +WFG GSR+IIT+RD+HLLK H V+  Y+   LN++ AL L    AFK  +  P+ 
Sbjct: 308  VGKPDWFGPGSRVIITTRDKHLLKYHEVERTYEVKVLNHNAALHLLTWNAFKREKIDPIY 367

Query: 178  ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
            + V    R++ YA GLPLALEV+GS L G++V EW S LE  +  P +EIL ILQ+SFD 
Sbjct: 368  DDVL--NRVVTYASGLPLALEVIGSNLYGKTVAEWESALETYKRIPSNEILKILQVSFDA 425

Query: 238  LQELEKKIFLDIACFFKGNDR---DYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN---T 291
            L+E ++ +FLDIAC FKG++    D +   L G G    IG  VL+EK LI  + N   T
Sbjct: 426  LEEEQQNVFLDIACCFKGHEWTEVDDIFRALYGNGKKYHIG--VLVEKSLIKYNRNNRGT 483

Query: 292  LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
            + MH+L+Q++G++I +++SPEE GKR RLW  +++  VL  +TGT  +E I LD+   + 
Sbjct: 484  VQMHNLIQDMGREIERQRSPEEPGKRKRLWSPKDIIQVLKHNTGTSKIEIICLDSSISDK 543

Query: 352  EVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
            E  +  +  AF KM NL++L I N +   G  Y+   LR+L W  YP   LPSN      
Sbjct: 544  EETVEWNENAFMKMENLKILIIRNGKFSIGPNYIPEGLRVLEWHRYPSNCLPSNFD---P 600

Query: 412  IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
            I + +C                             ++PD                  +E 
Sbjct: 601  INLVIC-----------------------------KLPD-------------SSITSFEF 618

Query: 472  HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDL 531
            H S      L +LN   C  L  +P    + +L++L+ +         KC S + V    
Sbjct: 619  HGSSKKLGHLTVLNFDKCKFLTQIPDVSDLPNLKELSFR---------KCESLVAVDD-- 667

Query: 532  KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
                                          S+  L+ L  L+   CR L   P    NL 
Sbjct: 668  ------------------------------SVGFLNKLKKLSAYGCRKLTSFPPL--NLT 695

Query: 592  CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
             LR L++SGCS L+ FPEI+  M  +  L L    IKE+P S + L  L  L L  C+ +
Sbjct: 696  SLRRLQISGCSSLEYFPEILGEMVKIRVLELHDLPIKELPFSFQNLIGLSRLYLRRCR-I 754

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPIN 711
            V+L  S+  +  L    +  C K   V    G+ E++  L            W+      
Sbjct: 755  VQLRCSLAMMSKLSVFRIENCNKWHWVESEEGE-ETVGAL------------WWR----- 796

Query: 712  LMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTS 771
                      P  S           +CNL +    +       +  L LS N+F  LP  
Sbjct: 797  ----------PEFSA---------KNCNLCDDFFLTGFKRFAHVGYLNLSGNNFTILPEF 837

Query: 772  ITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLD 831
               L  L  +++ DC+ LQ +  LPPN++  R   CASL +                   
Sbjct: 838  FKELKFLRTLDVSDCEHLQKIRGLPPNLKDFRAINCASLTS------------------- 878

Query: 832  SLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLY 891
                  +KS+   +L + L     T+     + PG+ IPEWF  Q+ G S      S+ +
Sbjct: 879  -----SSKSM---LLNQELYEAGGTK----FMFPGTRIPEWFNQQSSGHS------SSFW 920

Query: 892  NKKKLVGYAICCVFHVL----------KNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDK 941
             + K     +C +   +          K S G++    YP   +N       +G  ++ +
Sbjct: 921  FRNKFPAKLLCLLIAPVSVPLYSLFPPKVSFGHHV--PYPKVFINGKC-QAFWGCHWKQR 977

Query: 942  FGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLG-QGLEVKMCGLH 999
              +   DH ++  L +    +  L  E   E  E NHV V +E  L  +   +K  G+H
Sbjct: 978  MMEL--DHTYIFDLQKLPFENDNLFEEGAWEE-EWNHVEVRYESVLELESSLIKGSGIH 1033


>gi|449530355|ref|XP_004172161.1| PREDICTED: TMV resistance protein N-like, partial [Cucumis sativus]
          Length = 987

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 261/703 (37%), Positives = 395/703 (56%), Gaps = 45/703 (6%)

Query: 1   MDSRCEKLRFLMD-SGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +D R + L  LM  S +    ++GI GM G+GKTT+++ +++   H F +  FL N+  +
Sbjct: 31  IDLRLKHLISLMAISTNHSTLVLGIYGMSGIGKTTLSKALFNHFFHFFNSRSFLPNINSL 90

Query: 60  S--SKGGLVSLQRQLLSQLL---KLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
           S  S  GL+ LQ+ LLS LL    L   S       +  +  RLQ KKVL+V+DD+  ++
Sbjct: 91  STSSPDGLLRLQQTLLSDLLIATNLRSRSSTTTDSTVVRMQERLQNKKVLVVLDDLDRIE 150

Query: 115 QLQSLA-GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHG--LNYDEALQLFNMKAFK 171
           Q  +LA  +R WFG GSRIIIT+R++ +L T  VDEVY      LN +E+L+LF+  AF+
Sbjct: 151 QANALAIRDRRWFGDGSRIIITTRNKQILDTLKVDEVYNMESNLLNDEESLELFSYHAFR 210

Query: 172 TYQPLQECVQLSARIIRYAGGLPLALEVLG-SFLSGRSVDEWRSTLERLEIEPPSEILDI 230
              P +E ++ S  I+ Y G LPLALE+LG SF  GR ++EWRS +ERL+  P  ++ + 
Sbjct: 211 EQNPPEELLECSKSIVSYCGSLPLALEILGGSFFGGRPMEEWRSAMERLKRIPAWDLQEK 270

Query: 231 LQISFDGLQ-ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH- 288
           L+I F+GL+ E+E++IFLD+ C+F G   + V   ++GCG +   G+R L  +CL+ V  
Sbjct: 271 LRIGFEGLRDEMEREIFLDVCCYFVGMKEELVVKIMDGCGMYGESGLRGLKWRCLVGVEF 330

Query: 289 -NNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNY 347
            +  L MHDL++++G++IV++   +E  +RSR+W   E   +L    G+E +EG+ +D  
Sbjct: 331 WSGRLKMHDLVRDMGREIVRQTCVKEPARRSRVWLYHEALKILLHQNGSENIEGLAIDMG 390

Query: 348 HHENEVYLCASAKAFSKMTNLRLLKICNLQL--PNGLEYLSNRLRLLGWRGYPLKFLPSN 405
              N+       +AF KM NLRLLK+  + L   N    +S  LR + W G+PLK +PS+
Sbjct: 391 KGNNKEKF--RLEAFGKMRNLRLLKLNYVHLIGSNFEHIISKELRWICWHGFPLKSIPSS 448

Query: 406 LQMDKTIEIYMCYSRIGE--LWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
                 + I M YS +     W+  + L+ LKV+ LSHSE L + P+FT  PNLE+L L+
Sbjct: 449 FYQGNLVAIDMRYSSLIHPWTWRDSQILENLKVLNLSHSEKLKKSPNFTKLPNLEQLKLK 508

Query: 464 GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLS 523
            CT L  +HPS+    KL ++N+++CT                 NL SLPT+I  L  L 
Sbjct: 509 NCTALSSLHPSIGQLCKLHLINLQNCT-----------------NLSSLPTSIYNLHSLQ 551

Query: 524 TLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL--KNCR--- 578
           T  +SG  K     + + H+E L+ L  + TAI  +P SI  L  L  L+L   NCR   
Sbjct: 552 TFIISGCSKIHCLHDDLGHLESLTTLLADRTAISHIPFSIVKLKKLTDLSLCGCNCRSGS 611

Query: 579 -SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELL 637
            S   LP  + +    R  +   C+ L   P  ++ +  L+EL L   +++ +P  I  L
Sbjct: 612 GSSASLPWRLVSWALPRPNQ--TCTAL-TLPSSLQGLSSLTELSLQNCNLESLPIDIGSL 668

Query: 638 TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
           ++L+ LNL   KNL  L + +  L  L  LN+  C +LE + E
Sbjct: 669 SELKKLNLGGNKNLRVLGTELCGLLKLNELNVENCGRLEFIQE 711



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 192/433 (44%), Gaps = 68/433 (15%)

Query: 531 LKFREFPEIVEHMEHLSELHLEGTAIRGLPL----SIELLSGLVLLNLKNCRSLEILPVT 586
           LK      I  + EH+    L      G PL    S      LV ++++   S  I P T
Sbjct: 412 LKLNYVHLIGSNFEHIISKELRWICWHGFPLKSIPSSFYQGNLVAIDMR--YSSLIHPWT 469

Query: 587 VSNLKCLRSLK---LSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLEL 642
             + + L +LK   LS   KLKK P   + + +L +L L   T++  +  SI  L KL L
Sbjct: 470 WRDSQILENLKVLNLSHSEKLKKSPNFTK-LPNLEQLKLKNCTALSSLHPSIGQLCKLHL 528

Query: 643 LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH-- 700
           +NL +C NL  LP+SI  L SL+T  +SGC K+  + + LG +ESL  L    TA+ H  
Sbjct: 529 INLQNCTNLSSLPTSIYNLHSLQTFIISGCSKIHCLHDDLGHLESLTTLLADRTAISHIP 588

Query: 701 ---------------------STSWYSYIPINLM--------RKSVALKLPS-LSGLCSL 730
                                 +   + +P  L+        +   AL LPS L GL SL
Sbjct: 589 FSIVKLKKLTDLSLCGCNCRSGSGSSASLPWRLVSWALPRPNQTCTALTLPSSLQGLSSL 648

Query: 731 RKLNLTDCNLMEGALPSDIGNLCSLKELYLSKN-SFVSLPTSITHLSKLLNIELEDCKRL 789
            +L+L +CNL   +LP DIG+L  LK+L L  N +   L T +  L KL  + +E+C RL
Sbjct: 649 TELSLQNCNL--ESLPIDIGSLSELKKLNLGGNKNLRVLGTELCGLLKLNELNVENCGRL 706

Query: 790 QSLPQLPPNIRQVRVNGCASLVTLLDA-----------------LKLCKSDSTMIACLDS 832
           + + + P N+R      C SLV   D                  L++C  D   + C  +
Sbjct: 707 EFIQEFPKNMRSFCATNCKSLVRTPDVSMFERAPNMILTNCCALLEVCGLDK--LECSTN 764

Query: 833 LKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYN 892
           +++ G  +L+       LE  S      S+ V G+++P+   +      +T   P+   N
Sbjct: 765 IRMAGCSNLSTDFRMSLLEKWSGDGLG-SLCVAGNQLPKCLHFFTTHPPLTFQVPN--IN 821

Query: 893 KKKLVGYAICCVF 905
              L+G  I  +F
Sbjct: 822 NNILLGLTIFAIF 834


>gi|357499339|ref|XP_003619958.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494973|gb|AES76176.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1109

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 267/772 (34%), Positives = 400/772 (51%), Gaps = 85/772 (11%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR   +  L+D G  D   MIGICG GGLGKTT+ R +Y+LI+ +F+   FL +VRE 
Sbjct: 203 LESRLLHVMSLLDVGCDDGACMIGICGSGGLGKTTLTRALYNLIADQFDGLCFLHSVREN 262

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S K GL  LQ+QLLS+ L    N   +V +GI ++  RL +KKVLL++DDV   KQL+ L
Sbjct: 263 SIKYGLEHLQKQLLSKTLGEEFN-FGHVSEGIPIIKDRLHQKKVLLILDDVDKPKQLKVL 321

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G   W G GSR+IIT+RD HLL  HG+  +Y   GLN  EAL+LF   AFK+       
Sbjct: 322 VGEPGWLGPGSRVIITTRDRHLLSCHGITRIYDLDGLNDKEALELFIKMAFKSNIIDSSY 381

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R ++Y  GLPLA+EV+GS L G+S++EW STL++ E  PP +I +I ++SFD L 
Sbjct: 382 DYILNRAVKYTSGLPLAIEVVGSNLFGKSIEEWESTLDKYERTPPEDIQNIFKVSFDALD 441

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLE-GCGFHPVIGIRVLIEKCLITVHNNTLW----- 293
           + EK +FLDI C FKG    YV   L    G+     I VL+EK LI  +    W     
Sbjct: 442 KEEKSVFLDIVCCFKGCPLAYVEKILHFHYGYCIKSHIGVLVEKSLIKTYIEYDWRRRPT 501

Query: 294 -----MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYH 348
                +HDL++  G++IVQ++SPEE G+RSRLW ++++ HVL E+ GT  +E I L+   
Sbjct: 502 NVIVTLHDLIEHTGKEIVQQESPEEPGERSRLWCQDDIVHVLKENIGTSKIEMIYLNFPT 561

Query: 349 HENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQM 408
             +E+    + KAF KMT L+ L I N Q   G ++L + LR+L W  YP + + S++  
Sbjct: 562 KNSEIDW--NGKAFKKMTKLKTLIIENGQFSKGPKHLPSTLRVLKWNRYPSESMSSSV-F 618

Query: 409 DKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
           +KT E                   K+K++ + + E L  + D +  PNLEK+  + C  L
Sbjct: 619 NKTFE-------------------KMKILKIDNCEYLTNISDVSFLPNLEKISFKNCKSL 659

Query: 469 YEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVS 528
             IH S+   ++L ILN  DC  L++ P   L                        L +S
Sbjct: 660 VRIHDSIGFLSQLQILNAADCNKLLSFPPLKLKSL-------------------RKLKLS 700

Query: 529 GDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS 588
           G    ++FPEI+  ME++ ++ L  T I  LP S   L GL  L ++ C  L  LP ++ 
Sbjct: 701 GCTSLKKFPEILGKMENIKKIILRKTGIEELPFSFNNLIGLTDLTIEGCGKLS-LPSSIL 759

Query: 589 NLKCLRSLKLSGCSKL-------------------------KKFPEI-VRSMKDLSELFL 622
            +  L  + + G S+L                          +F  I +    ++  L+L
Sbjct: 760 MMLNLLEVSIFGYSQLLPKQNDNLSSTLSSNVNVLRLNASNHEFLTIALMWFSNVETLYL 819

Query: 623 DGTSIKEVPSSIELLTKLELLNLSDCKNLVR---LPSSIIALKSLKTLNLSGCFKLENVP 679
            G++IK +P S++    ++ ++L  C+ L     +P ++I L +L+  +L+   K   + 
Sbjct: 820 SGSTIKILPESLKNCLSIKCIDLDGCETLEEIKGIPPNLITLSALRCKSLTSSSKSMLIS 879

Query: 680 ETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLR 731
           + L    S+ E     +    +  W+ Y     +  S     PSL  L S R
Sbjct: 880 QELHLAGSI-ECCFPSSPSERTPEWFEYQRRESISFSFRNNFPSLVFLFSSR 930



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 104/450 (23%), Positives = 167/450 (37%), Gaps = 116/450 (25%)

Query: 547 SELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKK 606
           SE+   G A + +      L  L++ N +  +  + LP T+  LK  R    S  S +  
Sbjct: 564 SEIDWNGKAFKKMTK----LKTLIIENGQFSKGPKHLPSTLRVLKWNRYPSESMSSSV-- 617

Query: 607 FPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKT 666
           F +    MK L    +D        S +  L  LE ++  +CK+LVR+  SI  L  L+ 
Sbjct: 618 FNKTFEKMKILK---IDNCEYLTNISDVSFLPNLEKISFKNCKSLVRIHDSIGFLSQLQI 674

Query: 667 LNLS----------------------GCFKLENVPETLGQIESLEELDISGTAVPHSTSW 704
           LN +                      GC  L+  PE LG++E+++++ +  T +      
Sbjct: 675 LNAADCNKLLSFPPLKLKSLRKLKLSGCTSLKKFPEILGKMENIKKIILRKTGIEELPFS 734

Query: 705 YSYIPINLMRKSV----ALKLPSLSGLCSLRKLNLTDCNLMEGA--LPSDIGNLCS---- 754
           ++ + I L   ++     L LPS      L  LNL + ++   +  LP    NL S    
Sbjct: 735 FNNL-IGLTDLTIEGCGKLSLPS----SILMMLNLLEVSIFGYSQLLPKQNDNLSSTLSS 789

Query: 755 ------------------------LKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQ 790
                                   ++ LYLS ++   LP S+ +   +  I+L+ C+ L+
Sbjct: 790 NVNVLRLNASNHEFLTIALMWFSNVETLYLSGSTIKILPESLKNCLSIKCIDLDGCETLE 849

Query: 791 SLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYL 850
            +  +PPN+  +    C SL +         S S +I+    L L G+    F       
Sbjct: 850 EIKGIPPNLITLSALRCKSLTS--------SSKSMLIS--QELHLAGSIECCFPS----- 894

Query: 851 EAVSNTRQHLSVVVPGSEIPEWFMYQNEGS----------------SITVTRPSNLYNKK 894
                         P    PEWF YQ   S                S  V  PS  Y++ 
Sbjct: 895 -------------SPSERTPEWFEYQRRESISFSFRNNFPSLVFLFSSRVNHPS-YYSRD 940

Query: 895 KLVGYAICCVFHVLKNSRGNNC-FGSYPTH 923
            +V        H++ N    NC  G  P H
Sbjct: 941 YIVNPFDSIRVHLIINENVYNCGIGLEPGH 970


>gi|27764536|gb|AAO23066.1| R 3 protein [Glycine max]
          Length = 897

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 257/703 (36%), Positives = 373/703 (53%), Gaps = 55/703 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + S+  ++R L+D GS DV  +IGI GMGGLGKTT+A  VY+LI+  F+ S FL NVRE 
Sbjct: 191 LGSQVIEVRKLLDVGSHDVVHIIGIHGMGGLGKTTLALAVYNLIALHFDESCFLQNVREE 250

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  +LS+LL   D ++ +  +G  M+  RLQRKKVLL++DDV   +QL+++
Sbjct: 251 SNKHGLKHLQSIILSKLLGEKDINLTSWQEGASMIQHRLQRKKVLLILDDVDKRQQLKAI 310

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G  +WFG GSR+IIT+RD+H+LK H V+  Y+   LN   ALQL    AFK  +     
Sbjct: 311 VGRPDWFGPGSRVIITTRDKHILKYHEVERTYEVKVLNQSAALQLLKWNAFKREKNDPSY 370

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R++ YA GLPLALE++GS L G++V EW S +E  +  P  EIL+IL++SFD L 
Sbjct: 371 EDVLNRVVTYASGLPLALEIIGSNLFGKTVAEWESAMEHYKRIPSDEILEILKVSFDALG 430

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG----CGFHPVIGIRVLIEKCLITVHNNTLWMH 295
           E +K +FLDIAC  KG     V + L G    C  H    I VL++K L  V +  + MH
Sbjct: 431 EEQKNVFLDIACCLKGCKLTEVEHMLRGLYDNCMKH---HIDVLVDKSLTKVRHGIVEMH 487

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DL+Q++G++I +++SPEE GKR RLW  +++  VL  +TGT  +E I +D    + E  +
Sbjct: 488 DLIQDMGREIERQRSPEEPGKRKRLWSPKDIIQVLKHNTGTSKIEIIYVDFSISDKEETV 547

Query: 356 CASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
             +  AF KM NL++L I N +   G  Y    LR+L W  YP   LPSN      I + 
Sbjct: 548 EWNENAFMKMENLKILIIRNGKFSKGPNYFPQGLRVLEWHRYPSNCLPSNFD---PINLV 604

Query: 416 MCY----SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
           +C     S     + G   L  L V+     + L ++PD +  PNL +L  + C  L  +
Sbjct: 605 ICKLPDSSMTSFEFHGSSKLGHLTVLKFDWCKFLTQIPDVSDLPNLRELSFQWCESLVAV 664

Query: 472 HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDL 531
             S+   NKL  LN   C  L + P          L+L S          L TL++S   
Sbjct: 665 DDSIGFLNKLKKLNAYGCRKLTSFP---------PLHLTS----------LETLELSHCS 705

Query: 532 KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
               FPEI+  ME++  L L G  I+ LP S + L GL  L++  C  ++ L  +++ + 
Sbjct: 706 SLEYFPEILGEMENIERLDLHGLPIKELPFSFQNLIGLQQLSMFGCGIVQ-LRCSLAMMP 764

Query: 592 CLRSLKLSGCSKLK---------KFPEIVRSMKDLSELFLDGTSIKEVP-------SSIE 635
            L + K   C++ +         K   I+ S    +  +    S K          +  +
Sbjct: 765 KLSAFKFVNCNRWQWVESEEAEEKVGSIISSE---ARFWTHSFSAKNCNLCDDFFLTGFK 821

Query: 636 LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
               +  LNLS   N   LP     L+ L +LN+S C  L+ +
Sbjct: 822 KFAHVGYLNLSR-NNFTILPEFFKELQFLGSLNVSHCKHLQEI 863



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 113/266 (42%), Gaps = 45/266 (16%)

Query: 588 SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLS 646
           S L  L  LK   C  L + P+ V  + +L EL F    S+  V  SI  L KL+ LN  
Sbjct: 622 SKLGHLTVLKFDWCKFLTQIPD-VSDLPNLRELSFQWCESLVAVDDSIGFLNKLKKLNAY 680

Query: 647 DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH-STSWY 705
            C+ L   P   + L SL+TL LS C  LE  PE LG++E++E LD+ G  +     S+ 
Sbjct: 681 GCRKLTSFPP--LHLTSLETLELSHCSSLEYFPEILGEMENIERLDLHGLPIKELPFSFQ 738

Query: 706 SYIP----------INLMRKSVALKLPSLSGL----CS---------------------- 729
           + I           I  +R S+A+ +P LS      C+                      
Sbjct: 739 NLIGLQQLSMFGCGIVQLRCSLAM-MPKLSAFKFVNCNRWQWVESEEAEEKVGSIISSEA 797

Query: 730 ---LRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDC 786
                  +  +CNL +    +       +  L LS+N+F  LP     L  L ++ +  C
Sbjct: 798 RFWTHSFSAKNCNLCDDFFLTGFKKFAHVGYLNLSRNNFTILPEFFKELQFLGSLNVSHC 857

Query: 787 KRLQSLPQLPPNIRQVRVNGCASLVT 812
           K LQ +  +P N+R      CASL +
Sbjct: 858 KHLQEIRGIPQNLRLFNARNCASLTS 883


>gi|357468657|ref|XP_003604613.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
 gi|355505668|gb|AES86810.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
          Length = 1637

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 233/567 (41%), Positives = 334/567 (58%), Gaps = 46/567 (8%)

Query: 1   MDSRCEKLRFLMDSG-SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +DSR + +  L+D+  S+DV ++G+ GMGG+GKTTIA+ +Y+ I   FEA  FL N+RE+
Sbjct: 133 VDSRVQDMIQLIDTQQSNDVLLLGMWGMGGMGKTTIAKAIYNKIGRNFEARSFLANIREV 192

Query: 60  SSK-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
             +  G V LQ QL+  + K     I N+     +L  RL  K+VLLV+DDV  + QL +
Sbjct: 193 WEQVSGQVYLQEQLMHDIFKETTTKIQNIELEKPILKERLCHKRVLLVLDDVNKLDQLNA 252

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G+R WF  GSRIIIT+RD+H+L+   VD++Y    ++  E+L+LF+  AFK       
Sbjct: 253 LCGSRRWFAPGSRIIITTRDKHILRGKQVDKIYIMKEMDGSESLELFSWHAFKL------ 306

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
                             LEVLGS+L  R + EW S LE+L+  P  E+   L+IS+DGL
Sbjct: 307 ----------------TTLEVLGSYLFERELLEWISVLEKLKKIPNDEVHKKLKISYDGL 350

Query: 239 QE-LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHD 296
            +  +K+IFLDI+CFF G DR+ V   L GCGF   IGI VL+E+ L+ V + N L MHD
Sbjct: 351 NDDTQKEIFLDISCFFIGMDRNDVIRILNGCGFFAEIGISVLVERSLVMVDDKNKLGMHD 410

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL+++G++I++ +SP+E  + SRLW  E+V  VL E TGT+ VEG+         + +  
Sbjct: 411 LLRDMGREIIREKSPKEPEEHSRLWFHEDVLDVLLEHTGTKAVEGLTFKMPGRSTQRF-- 468

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            S KAF  M  LRLL++  +QL    +YLS  LR L W G+PL  +PSN      + I +
Sbjct: 469 -STKAFENMKKLRLLQLSGVQLDGDFKYLSRNLRWLHWNGFPLACIPSNFYQRNIVSIEL 527

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             S +  +WK ++ +D+LK++ LSHS  L + PDF+  PNLEKL+L+ C RL EI  S+ 
Sbjct: 528 ENSSVKLVWKEMQRMDQLKILNLSHSHCLTQTPDFSYLPNLEKLVLKDCPRLSEISQSIG 587

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
             NK++++N+K+C SL                  +LP  I  LK L TL +SG L   + 
Sbjct: 588 HLNKILLINLKNCISLC-----------------NLPRNIYTLKSLKTLILSGCLMIDKL 630

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSI 563
            E +E ME L+ L    TAI  +P S+
Sbjct: 631 EEDLEQMESLTTLIANNTAITKVPFSV 657



 Score =  276 bits (706), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 179/470 (38%), Positives = 274/470 (58%), Gaps = 42/470 (8%)

Query: 1    MDSRCEKLRFLMDS-GSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            ++S+ + +  L+D+  S DV +IG+ GMGG+GK+T+A+ +Y+ I   FE   FL N+RE+
Sbjct: 1199 VESQVQDMIKLLDTHQSKDVLLIGMWGMGGIGKSTVAKAIYNKIGRNFEGRSFLANIREV 1258

Query: 60   SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
               G  VS Q++         D+ I                 +VLLV+DDV  + QL +L
Sbjct: 1259 ---GEQVSGQQK---------DSVI-----------------RVLLVLDDVNKLDQLNTL 1289

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
             G+ +WF  GSRIIIT+RD  +L+   VD++Y+   +N  E+L+ F+  AFK   P ++ 
Sbjct: 1290 CGSCKWFAPGSRIIITTRDMDILRAKKVDKIYEMKEMNESESLERFSWHAFKQKSPKEDF 1349

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             ++S  +++Y+GGLPLALEVLGS+L  R V +W   LE+L+  P  ++   L+IS+ GL 
Sbjct: 1350 SEISINVVKYSGGLPLALEVLGSYLFDREVLDWICVLEKLQSIPNEQVYKRLKISYHGLN 1409

Query: 240  -ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDL 297
             + EK IFLDIACFF G DR+ V   L  C     IGI+VL+E+ L+ V + N L MHDL
Sbjct: 1410 DDTEKSIFLDIACFFIGIDRNDVICILNSCRLFTEIGIKVLVERSLVIVDDKNKLGMHDL 1469

Query: 298  LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
            L+++G++I++ +SP+E  +RSRLW   +V  VL++ TGT++VEG+         + +   
Sbjct: 1470 LRDMGREIIREKSPKEPEERSRLWFHGDVLDVLSKHTGTKVVEGLTFKMPGRSAQRF--- 1526

Query: 358  SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
            S KAF  M  LRLL++  +QL    +YLS  L+ L W G+PL  + SN      + + + 
Sbjct: 1527 STKAFENMKKLRLLQLSGVQLDGDFKYLSRNLKWLHWNGFPLTCIASNFYQRNLVSVVLE 1586

Query: 418  YSRIGELWKGIKHL-----DKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
             S +  +WK ++ +      KL V  L H EN+ +   F     L+  IL
Sbjct: 1587 NSNVKLVWKEMQIIYSGLHQKLLVGGLHHKENVFQT--FWAVVKLKNTIL 1634



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 121/491 (24%), Positives = 209/491 (42%), Gaps = 79/491 (16%)

Query: 459 KLILEGCTRLYEIHPSLLLHNKL--IILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
           ++I E   +  E H  L  H  +  ++L      ++  L  K+  +S ++ + K+     
Sbjct: 418 EIIREKSPKEPEEHSRLWFHEDVLDVLLEHTGTKAVEGLTFKMPGRSTQRFSTKAFENMK 477

Query: 517 S-GLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLK 575
              L  LS + + GD K+           +L  LH  G  +  +P +      +V + L+
Sbjct: 478 KLRLLQLSGVQLDGDFKYLS--------RNLRWLHWNGFPLACIPSNF-YQRNIVSIELE 528

Query: 576 NCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSI 634
           N  S++++   +  +  L+ L LS    L + P+    + +L +L L D   + E+  SI
Sbjct: 529 NS-SVKLVWKEMQRMDQLKILNLSHSHCLTQTPDF-SYLPNLEKLVLKDCPRLSEISQSI 586

Query: 635 ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
             L K+ L+NL +C +L  LP +I  LKSLKTL LSGC  ++ + E L Q+ESL  L  +
Sbjct: 587 GHLNKILLINLKNCISLCNLPRNIYTLKSLKTLILSGCLMIDKLEEDLEQMESLTTLIAN 646

Query: 695 GTA---VPHST---------------------------SWYSYIPINLMRKSVALKLPSL 724
            TA   VP S                            SW S  P N     ++    + 
Sbjct: 647 NTAITKVPFSVVRSKRIGFISLCGYEGFSRDVFPSIIWSWMS--PTN----GLSPTFQTT 700

Query: 725 SGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSL---PTSITH-LSKLLN 780
           +G+ SL  LN T+    + +  S++     L+ L+L   S + L    TSI H LS   +
Sbjct: 701 AGMSSLVSLNATNSISHDISSISNV--FPKLQSLWLECGSELQLSQDATSILHALSATSS 758

Query: 781 IELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKL-LGNK 839
            ELE       +     +++   +  C   V           D+T    L+SL + +G  
Sbjct: 759 TELESTATTSQV----SDVKTTSLIECRGQV----------QDTTTQNSLESLLIQMGMS 804

Query: 840 SLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGY 899
            L  ++L+E +          S ++PG   P W  + ++G S+    P       ++ G+
Sbjct: 805 CLISNILKEIILQNLTVDGRGSFLLPGDNYPNWSTFNSKGYSVIFEVP-------QVEGH 857

Query: 900 AICCVFHVLKN 910
           ++  + + LKN
Sbjct: 858 SLKTIMYGLKN 868


>gi|27764544|gb|AAO23074.1| R 10 protein [Glycine max]
          Length = 901

 Score =  371 bits (953), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 268/730 (36%), Positives = 388/730 (53%), Gaps = 63/730 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + S+  ++R L+D GS DV  +IGI GMGGLGKTT+A  VY+LI+  F+ S FL NVRE 
Sbjct: 191 LGSQVIEVRKLLDVGSHDVVHIIGIHGMGGLGKTTLALAVYNLIALHFDESCFLQNVREE 250

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  LLS+LL   D ++ +  +G  M+  RLQRKKVLL++DDV   +QL+++
Sbjct: 251 SNKHGLKHLQSILLSKLLGEKDITLTSWQEGASMIQHRLQRKKVLLILDDVDKREQLKAI 310

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G  +WFG GSR+IIT+RD+HLLK H V+  Y+   LN   ALQL    AFK  +     
Sbjct: 311 VGRPDWFGPGSRVIITTRDKHLLKYHEVERTYEVKVLNQSAALQLLKWNAFKREKIDPSY 370

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R++ YA GLPLALEV+GS L G++V EW S +E  +  P  EIL+IL++SFD L 
Sbjct: 371 EDVLNRVVTYASGLPLALEVIGSNLFGKTVAEWESAMEHYKRIPSDEILEILKVSFDALG 430

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG----CGFHPVIGIRVLIEKCLITVH---NNTL 292
           E +K +FLDIAC F+G     V + L      C  H    I VL+EK LI ++    +T+
Sbjct: 431 EEQKNVFLDIACCFRGYKWTEVDDILRALYGNCKKH---HIGVLVEKSLIKLNCYGTDTV 487

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            MHDL+Q++ ++I +++SP+E GK  RLW  +++  V  ++TGT  +E I LD+   + E
Sbjct: 488 EMHDLIQDMAREIERKRSPQEPGKCKRLWLPKDIIQVFKDNTGTSKIEIICLDSSISDKE 547

Query: 353 VYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
             +  +  AF KM NL++L I N +   G  Y    LR+L W  YP   LPSN   +  +
Sbjct: 548 ETVEWNENAFMKMENLKILIIRNDKFSKGPNYFPEGLRVLEWHRYPSNCLPSNFHPNNLV 607

Query: 413 EIYMCYSRIGEL-WKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
              +  S +    + G      L V+   + + L ++PD +  PNL +L  E C  L  +
Sbjct: 608 ICKLPDSCMTSFEFHGPSKFGHLTVLKFDNCKFLTQIPDVSDLPNLRELSFEECESLVAV 667

Query: 472 HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDL 531
             S+   NKL  L+   C+ L         KS   LNL S          L TL++S   
Sbjct: 668 DDSIGFLNKLKKLSAYGCSKL---------KSFPPLNLTS----------LQTLELSQCS 708

Query: 532 KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
               FPEI+  ME++  L L G  I+ L  S + L GL  L L++C  ++ LP +++ + 
Sbjct: 709 SLEYFPEIIGEMENIKHLFLYGLPIKELSFSFQNLIGLRWLTLRSCGIVK-LPCSLAMMP 767

Query: 592 CLRSLKLSGCSKL---------KKFPEIVR------SMKDLS---ELFLDGTSIKEVPSS 633
            L    +  C++          KK   I        S KD +   + FL G         
Sbjct: 768 ELFEFHMEYCNRWQWVESEEGEKKVGSIPSSKAHRFSAKDCNLCDDFFLTG--------- 818

Query: 634 IELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDI 693
            +   ++  LNLS   N   LP     L+ L++L +S C   E++ E  G   +LE  D 
Sbjct: 819 FKTFARVGHLNLSG-NNFTILPEFFKELQLLRSLMVSDC---EHLQEIRGLPPNLEYFDA 874

Query: 694 SGTAVPHSTS 703
              A   S+S
Sbjct: 875 RNCASLTSSS 884



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 118/261 (45%), Gaps = 39/261 (14%)

Query: 588 SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLS 646
           S    L  LK   C  L + P+ V  + +L EL F +  S+  V  SI  L KL+ L+  
Sbjct: 625 SKFGHLTVLKFDNCKFLTQIPD-VSDLPNLRELSFEECESLVAVDDSIGFLNKLKKLSAY 683

Query: 647 DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH-STSWY 705
            C  L   P   + L SL+TL LS C  LE  PE +G++E+++ L + G  +   S S+ 
Sbjct: 684 GCSKLKSFPP--LNLTSLQTLELSQCSSLEYFPEIIGEMENIKHLFLYGLPIKELSFSFQ 741

Query: 706 SYIPINLM--RKSVALKLP-SLSGLCSLRKLNLTDCNLME-----------GALPSDIG- 750
           + I +  +  R    +KLP SL+ +  L + ++  CN  +           G++PS    
Sbjct: 742 NLIGLRWLTLRSCGIVKLPCSLAMMPELFEFHMEYCNRWQWVESEEGEKKVGSIPSSKAH 801

Query: 751 -------NLCS------------LKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQS 791
                  NLC             +  L LS N+F  LP     L  L ++ + DC+ LQ 
Sbjct: 802 RFSAKDCNLCDDFFLTGFKTFARVGHLNLSGNNFTILPEFFKELQLLRSLMVSDCEHLQE 861

Query: 792 LPQLPPNIRQVRVNGCASLVT 812
           +  LPPN+       CASL +
Sbjct: 862 IRGLPPNLEYFDARNCASLTS 882


>gi|356514972|ref|XP_003526175.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1158

 Score =  371 bits (953), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 259/698 (37%), Positives = 390/698 (55%), Gaps = 52/698 (7%)

Query: 1   MDSRCEKL-RFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           M+SR E+L + L     +DVR++GI GMGG+GKTT+A  +Y+ I++++      D+V +I
Sbjct: 206 MESRVEELEKCLALESVTDVRVVGISGMGGIGKTTLALALYEKIAYQY------DDVNKI 259

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
               G + +Q+QLL Q L   +  I NV  G  ++G+RL+ K+ L+V+D+V  V+QL   
Sbjct: 260 YQHYGSLGVQKQLLDQCLNDENLEICNVSRGTYLIGTRLRNKRGLIVLDNVSQVEQLHMF 319

Query: 120 AGNREWF-----GSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
            G+RE       G GSRIII SRDEH+L+THGV+ VY+   LN D A+QLF   AFK   
Sbjct: 320 TGSRETLLRECLGGGSRIIIISRDEHILRTHGVNHVYRVRPLNQDNAVQLFCNNAFKCDY 379

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
            + +   L+   + +A G PLA++V+G  L G  V +W  TL RL       I+D+++IS
Sbjct: 380 IMSDYKMLTHDALWHAQGHPLAIKVIGKSLFGLDVSQWEGTLVRLSENKSKNIMDVIRIS 439

Query: 235 FDGLQELEKKIFLDIACFFKGND-RDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLW 293
           +D L+E +K+IFLDIACF   +   D V   L   GF+  IG+++L++K LIT+    ++
Sbjct: 440 YDALEEKDKEIFLDIACFSGQHYFEDNVKEILNFRGFNSEIGLQILVDKSLITISYGKIY 499

Query: 294 MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
           MHDLL++LG+ IV+ +SP+E  K SRLW  E++   ++ +   + +E IV+++   E  +
Sbjct: 500 MHDLLRDLGKCIVREKSPKEPRKWSRLWDCEDLYKFMSSNKEAKNLEAIVVED---EPGM 556

Query: 354 YLCASAK--AFSKMTNLRLL-----------KICNLQLPNGLEYLSNRLRLLGWRGYPLK 400
           +   + +  A SKM NL+LL            I   +    L YLSN L  L W  YP  
Sbjct: 557 FSETTMRFDALSKMKNLKLLILPRYYEKGLSTIEEEKFSGSLNYLSNELGYLIWHFYPFN 616

Query: 401 FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
           FLP   Q    +E+ +  S I  LW   + +  L+ + +S  +NLI + DF    NLE+L
Sbjct: 617 FLPKCFQPHNLVELNLSGSNIQHLWDSTQPIPNLRRLNVSDCDNLIEVQDFEDL-NLEEL 675

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPT 514
            L+GC +L +IHPS+    KL  LN+K C SL+ LP  +   +LE+LN      L+ +  
Sbjct: 676 NLQGCVQLRQIHPSIGHLKKLTHLNLKYCKSLVNLPHFVEDLNLEELNLQGCVQLRQIHP 735

Query: 515 TISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLN 573
           +I   K L+ L++         P  V  + +L EL+LEG   +R +  SI  L  L +LN
Sbjct: 736 SIGHPKKLTHLNLKYCKSLVNLPHFVGDL-NLKELNLEGCVQLRQIHPSIGHLRKLTVLN 794

Query: 574 LKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSS 633
           LK+C+SL   P  +  L  L  L L GCS L           DLSE      S++ +  S
Sbjct: 795 LKDCKSLISFPSNILGLSSLTYLSLFGCSNLHTI--------DLSE-----DSVRCLLPS 841

Query: 634 IELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSG 671
             + + +  L+LS C NL+++P +   L SL+ L L G
Sbjct: 842 YTIFSCMRQLDLSFC-NLLKIPDAFGNLHSLEKLCLRG 878



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 138/471 (29%), Positives = 213/471 (45%), Gaps = 69/471 (14%)

Query: 516  ISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNL 574
            I  L+ L+  D    ++ ++F ++     +L EL+L+G   +R +  SI  L  L  LNL
Sbjct: 647  IPNLRRLNVSDCDNLIEVQDFEDL-----NLEELNLQGCVQLRQIHPSIGHLKKLTHLNL 701

Query: 575  KNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSS 633
            K C+SL  LP  V +L  L  L L GC +L++    +   K L+ L L    S+  +P  
Sbjct: 702  KYCKSLVNLPHFVEDLN-LEELNLQGCVQLRQIHPSIGHPKKLTHLNLKYCKSLVNLPHF 760

Query: 634  IELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDI 693
            +  L  L+ LNL  C  L ++  SI  L+ L  LNL  C  L + P  +  + SL  L +
Sbjct: 761  VGDLN-LKELNLEGCVQLRQIHPSIGHLRKLTVLNLKDCKSLISFPSNILGLSSLTYLSL 819

Query: 694  SGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLC 753
             G +  H+        I+L   SV   LPS +    +R+L+L+ CNL++  +P   GNL 
Sbjct: 820  FGCSNLHT--------IDLSEDSVRCLLPSYTIFSCMRQLDLSFCNLLK--IPDAFGNLH 869

Query: 754  SLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQ------------ 801
            SL++L L  N+F +LP+    LSKLL + L+ CKRL+ LP+LP                 
Sbjct: 870  SLEKLCLRGNNFETLPSLEE-LSKLLLLNLQHCKRLKYLPELPSATDWPMKKWGTVEEDE 928

Query: 802  ----VRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLL--------GNKSLAFSMLREY 849
                + +  C  LV      + C +D      +  ++L            S+A+ +    
Sbjct: 929  YGLGLNIFNCPELVD-----RDCCTDKCFFWMMQMVQLFTISLNCHPSGDSMAWRV---- 979

Query: 850  LEAVSNTRQHLSVVVPGSEIPEWFMYQN--EGSSITVTRPSNLYNKKKLVGYAICCVFHV 907
                      +S ++PGSEIP WF  Q+   G+ I +     +   K  +G A+  +F V
Sbjct: 980  --------PLISSIIPGSEIPSWFDEQHLGMGNVINIDISHFMQLDKYWIGIALSVIFVV 1031

Query: 908  LKNSRGNNCFGSYPTHQLNCHIGHGIY-GIGFRDKFGQAGSDHLWLLYLSR 957
             K  R        P  +        +Y  + FR+      SDHLWL Y  R
Sbjct: 1032 HKERR-----MPPPDMEQRKKERPSLYIPVLFREDLVTDESDHLWLFYYPR 1077



 Score = 40.8 bits (94), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 27/131 (20%)

Query: 684 QIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDC-NLME 742
           Q  +L EL++SG+ + H   W S  PI                  +LR+LN++DC NL+E
Sbjct: 623 QPHNLVELNLSGSNIQHL--WDSTQPIP-----------------NLRRLNVSDCDNLIE 663

Query: 743 GALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPP--NI 799
                D+    +L+EL L        +  SI HL KL ++ L+ CK L +LP      N+
Sbjct: 664 VQDFEDL----NLEELNLQGCVQLRQIHPSIGHLKKLTHLNLKYCKSLVNLPHFVEDLNL 719

Query: 800 RQVRVNGCASL 810
            ++ + GC  L
Sbjct: 720 EELNLQGCVQL 730


>gi|356560031|ref|XP_003548299.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1091

 Score =  371 bits (953), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 269/732 (36%), Positives = 388/732 (53%), Gaps = 66/732 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + S+  ++R L+D GS DV  +IGI GMGGLGKTT+A  VY+LI+  F+ S FL NVRE 
Sbjct: 191 LGSQVIEVRKLLDVGSHDVVHIIGIHGMGGLGKTTLALAVYNLIALHFDESCFLQNVREE 250

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  LLS+LL   D ++ +  +G  M+  RLQRKKVLL++DDV   +QL+++
Sbjct: 251 SNKHGLKHLQSILLSKLLGEKDITLTSWQEGASMIQHRLQRKKVLLILDDVDKREQLKAI 310

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G  +WFG GSR+IIT+RD+HLLK H V+  Y+   LN   ALQL    AFK  +     
Sbjct: 311 VGRPDWFGPGSRVIITTRDKHLLKYHEVERTYEVKVLNQSAALQLLKWNAFKREKIDPSY 370

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R++ YA GLPLALEV+GS L G++V EW S +E  +  P  EIL+IL++SFD L 
Sbjct: 371 EDVLNRVVTYASGLPLALEVIGSNLFGKTVAEWESAMEHYKRIPSDEILEILKVSFDALG 430

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG----CGFHPVIGIRVLIEKCLITVH---NNTL 292
           E +K +FLDIAC F+G     V + L      C  H    I VL+EK LI ++    +T+
Sbjct: 431 EEQKNVFLDIACCFRGYKWTEVDDILRALYGNCKKH---HIGVLVEKSLIKLNCYGTDTV 487

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            MHDL+Q++ ++I +++SP+E GK  RLW  +++  V  ++TGT  +E I LD+   + E
Sbjct: 488 EMHDLIQDMAREIERKRSPQEPGKCKRLWLPKDIIQVFKDNTGTSKIEIICLDSSISDKE 547

Query: 353 VYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
             +  +  AF KM NL++L I N +   G  Y    LR+L W  YP   LPSN   +  +
Sbjct: 548 ETVEWNENAFMKMENLKILIIRNDKFSKGPNYFPEGLRVLEWHRYPSNCLPSNFHPNNLV 607

Query: 413 EIYM---CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLY 469
              +   C +   E     K    L V+   + + L ++PD +  PNL +L  E C  L 
Sbjct: 608 ICKLPDSCMTSF-EFHGPSKKFGHLTVLKFDNCKFLTQIPDVSDLPNLRELSFEECESLV 666

Query: 470 EIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG 529
            +  S+   NKL  L+   C+ L         KS   LNL S          L TL++S 
Sbjct: 667 AVDDSIGFLNKLKKLSAYGCSKL---------KSFPPLNLTS----------LQTLELSQ 707

Query: 530 DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSN 589
                 FPEI+  ME++  L L G  I+ L  S + L GL  L L++C  ++ LP +++ 
Sbjct: 708 CSSLEYFPEIIGEMENIKHLFLYGLPIKELSFSFQNLIGLRWLTLRSCGIVK-LPCSLAM 766

Query: 590 LKCLRSLKLSGCSKL---------KKFPEIVR------SMKDLS---ELFLDGTSIKEVP 631
           +  L    +  C++          KK   I        S KD +   + FL G       
Sbjct: 767 MPELFEFHMEYCNRWQWVESEEGEKKVGSIPSSKAHRFSAKDCNLCDDFFLTG------- 819

Query: 632 SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
              +   ++  LNLS   N   LP     L+ L++L +S C   E++ E  G   +LE  
Sbjct: 820 --FKTFARVGHLNLSG-NNFTILPEFFKELQLLRSLMVSDC---EHLQEIRGLPPNLEYF 873

Query: 692 DISGTAVPHSTS 703
           D    A   S+S
Sbjct: 874 DARNCASLTSSS 885



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 144/346 (41%), Gaps = 76/346 (21%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
           L  LK   C  L + P+ V  + +L EL F +  S+  V  SI  L KL+ L+   C  L
Sbjct: 631 LTVLKFDNCKFLTQIPD-VSDLPNLRELSFEECESLVAVDDSIGFLNKLKKLSAYGCSKL 689

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH-STSWYSYIPI 710
              P   + L SL+TL LS C  LE  PE +G++E+++ L + G  +   S S+ + I +
Sbjct: 690 KSFPP--LNLTSLQTLELSQCSSLEYFPEIIGEMENIKHLFLYGLPIKELSFSFQNLIGL 747

Query: 711 NLM--RKSVALKLP-SLSGLCSLRKLNLTDCNLME-----------GALPSDIG------ 750
             +  R    +KLP SL+ +  L + ++  CN  +           G++PS         
Sbjct: 748 RWLTLRSCGIVKLPCSLAMMPELFEFHMEYCNRWQWVESEEGEKKVGSIPSSKAHRFSAK 807

Query: 751 --NLCS------------LKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP 796
             NLC             +  L LS N+F  LP     L  L ++ + DC+ LQ +  LP
Sbjct: 808 DCNLCDDFFLTGFKTFARVGHLNLSGNNFTILPEFFKELQLLRSLMVSDCEHLQEIRGLP 867

Query: 797 PNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNT 856
           PN+       CASL +         S   M                  +L + L     T
Sbjct: 868 PNLEYFDARNCASLTS---------SSKNM------------------LLNQKLHEAGGT 900

Query: 857 RQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
               + +  G+ IPEWF  Q+ G S      S+ + + K     +C
Sbjct: 901 ----NFMFTGTSIPEWFDQQSSGPS------SSFWFRNKFPAKLLC 936


>gi|449470346|ref|XP_004152878.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1074

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 261/703 (37%), Positives = 395/703 (56%), Gaps = 45/703 (6%)

Query: 1   MDSRCEKLRFLMD-SGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +D R + L  LM  S +    ++GI GM G+GKTT+++ +++   H F +  FL N+  +
Sbjct: 104 IDLRLKHLISLMAISTNHSTLVLGIYGMSGIGKTTLSKALFNHFFHFFNSRSFLPNINSL 163

Query: 60  S--SKGGLVSLQRQLLSQLL---KLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
           S  S  GL+ LQ+ LLS LL    L   S       +  +  RLQ KKVL+V+DD+  ++
Sbjct: 164 STSSPDGLLRLQQTLLSDLLIATNLRSRSSTTTDSTVVRMQERLQNKKVLVVLDDLDRIE 223

Query: 115 QLQSLA-GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHG--LNYDEALQLFNMKAFK 171
           Q  +LA  +R WFG GSRIIIT+R++ +L T  VDEVY      LN +E+L+LF+  AF+
Sbjct: 224 QANALAIRDRRWFGDGSRIIITTRNKQILDTLKVDEVYNMESNLLNDEESLELFSYHAFR 283

Query: 172 TYQPLQECVQLSARIIRYAGGLPLALEVLG-SFLSGRSVDEWRSTLERLEIEPPSEILDI 230
              P +E ++ S  I+ Y G LPLALE+LG SF  GR ++EWRS +ERL+  P  ++ + 
Sbjct: 284 EQNPPEELLECSKSIVSYCGSLPLALEILGGSFFGGRPMEEWRSAMERLKRIPAWDLQEK 343

Query: 231 LQISFDGLQ-ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH- 288
           L+I F+GL+ E+E++IFLD+ C+F G   + V   ++GCG +   G+R L  +CL+ V  
Sbjct: 344 LRIGFEGLRDEMEREIFLDVCCYFVGMKEELVVKIMDGCGMYGESGLRGLKWRCLVGVEF 403

Query: 289 -NNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNY 347
            +  L MHDL++++G++IV++   +E  +RSR+W   E   +L    G+E +EG+ +D  
Sbjct: 404 WSGRLKMHDLVRDMGREIVRQTCVKEPARRSRVWLYHEALKILLHQNGSENIEGLAIDMG 463

Query: 348 HHENEVYLCASAKAFSKMTNLRLLKICNLQL--PNGLEYLSNRLRLLGWRGYPLKFLPSN 405
              N+       +AF KM NLRLLK+  + L   N    +S  LR + W G+PLK +PS+
Sbjct: 464 KGNNKEKF--RLEAFGKMRNLRLLKLNYVHLIGSNFEHIISKELRWICWHGFPLKSIPSS 521

Query: 406 LQMDKTIEIYMCYSRIGE--LWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
                 + I M YS +     W+  + L+ LKV+ LSHSE L + P+FT  PNLE+L L+
Sbjct: 522 FYQGNLVAIDMRYSSLIHPWTWRDSQILENLKVLNLSHSEKLKKSPNFTKLPNLEQLKLK 581

Query: 464 GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLS 523
            CT L  +HPS+    KL ++N+++CT                 NL SLPT+I  L  L 
Sbjct: 582 NCTALSSLHPSIGQLCKLHLINLQNCT-----------------NLSSLPTSIYNLHSLQ 624

Query: 524 TLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL--KNCR--- 578
           T  +SG  K     + + H+E L+ L  + TAI  +P SI  L  L  L+L   NCR   
Sbjct: 625 TFIISGCSKIDCLHDDLGHLESLTTLLADRTAISHIPFSIVKLKKLTDLSLCGCNCRSGS 684

Query: 579 -SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELL 637
            S   LP  + +    R  +   C+ L   P  ++ +  L+EL L   +++ +P  I  L
Sbjct: 685 GSSASLPWRLVSWALPRPNQT--CTAL-TLPSSLQGLSSLTELSLQNCNLESLPIDIGSL 741

Query: 638 TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
           ++L+ LNL   KNL  L + +  L  L  LN+  C +LE + E
Sbjct: 742 SELKKLNLGGNKNLRVLGTELCGLLKLNELNVENCGRLEFIQE 784



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 193/433 (44%), Gaps = 68/433 (15%)

Query: 531 LKFREFPEIVEHMEHLSELHLEGTAIRGLPL----SIELLSGLVLLNLKNCRSLEILPVT 586
           LK      I  + EH+    L      G PL    S      LV ++++   S  I P T
Sbjct: 485 LKLNYVHLIGSNFEHIISKELRWICWHGFPLKSIPSSFYQGNLVAIDMR--YSSLIHPWT 542

Query: 587 VSNLKCLRSLK---LSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLEL 642
             + + L +LK   LS   KLKK P   + + +L +L L   T++  +  SI  L KL L
Sbjct: 543 WRDSQILENLKVLNLSHSEKLKKSPNFTK-LPNLEQLKLKNCTALSSLHPSIGQLCKLHL 601

Query: 643 LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH-- 700
           +NL +C NL  LP+SI  L SL+T  +SGC K++ + + LG +ESL  L    TA+ H  
Sbjct: 602 INLQNCTNLSSLPTSIYNLHSLQTFIISGCSKIDCLHDDLGHLESLTTLLADRTAISHIP 661

Query: 701 ---------------------STSWYSYIPINLM--------RKSVALKLP-SLSGLCSL 730
                                 +   + +P  L+        +   AL LP SL GL SL
Sbjct: 662 FSIVKLKKLTDLSLCGCNCRSGSGSSASLPWRLVSWALPRPNQTCTALTLPSSLQGLSSL 721

Query: 731 RKLNLTDCNLMEGALPSDIGNLCSLKELYLSKN-SFVSLPTSITHLSKLLNIELEDCKRL 789
            +L+L +CNL   +LP DIG+L  LK+L L  N +   L T +  L KL  + +E+C RL
Sbjct: 722 TELSLQNCNL--ESLPIDIGSLSELKKLNLGGNKNLRVLGTELCGLLKLNELNVENCGRL 779

Query: 790 QSLPQLPPNIRQVRVNGCASLVTLLDA-----------------LKLCKSDSTMIACLDS 832
           + + + P N+R      C SLV   D                  L++C  D   + C  +
Sbjct: 780 EFIQEFPKNMRSFCATSCKSLVRTPDVSMFERAPNMILTNCCALLEVCGLDK--LECSTN 837

Query: 833 LKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYN 892
           +++ G  +L+       LE  S      S+ V G+++P+   +      +T   P+   N
Sbjct: 838 IRMAGCSNLSTDFRMSLLEKWSGDGLG-SLCVAGNQLPKCLHFFTTHPPLTFQVPN--IN 894

Query: 893 KKKLVGYAICCVF 905
              L+G  I  +F
Sbjct: 895 NNILLGLTIFAIF 907


>gi|297794829|ref|XP_002865299.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311134|gb|EFH41558.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1132

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 259/693 (37%), Positives = 388/693 (55%), Gaps = 71/693 (10%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
           VR +GI GM G+GKTT+A+ V+D +S EF+AS F+++  ++  + G+  L  +   +   
Sbjct: 163 VRCVGIWGMPGIGKTTLAKAVFDQMSGEFDASCFIEDFDKVIHEKGVYRLLEEHFLKEKP 222

Query: 79  LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
             D++I      + +L ++L  K+VL+V+DD+ +    + L G   WFG  S IIITSRD
Sbjct: 223 GTDSTI----TKLSLLSNKLNNKRVLVVLDDLRNPLIAEPLLGGFHWFGPESLIIITSRD 278

Query: 139 EHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALE 198
           + +L+   V+++Y+  GLN  EALQLF   A    +  Q   +LS ++I YA G PLAL 
Sbjct: 279 KQVLRLCRVNQIYEVQGLNKKEALQLFLRSASIKNKGEQNLKELSMKVIEYANGNPLALS 338

Query: 199 VLGSFLSGRS-VDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGND 257
           + G  L G+  + E  +T  +L+  PP +I+D  + S++ L + EK IFLDIACFF+G +
Sbjct: 339 IYGRELKGKKHLSEMETTFLKLKGHPPFKIVDAFKSSYESLNDREKNIFLDIACFFEGEN 398

Query: 258 RDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKR 317
            DYV   LEGCGF P +GI VL+EKCL+T+  N +WMH+L+Q++G++I+ +++  ++ +R
Sbjct: 399 VDYVMQLLEGCGFLPHVGIDVLVEKCLVTISENRVWMHNLIQDVGREIINKETV-QIERR 457

Query: 318 SRLWKEEEVCHVLTE----------------STGTELVEGIVLDNYHHENEVYLCASAKA 361
           SRLWK   + ++L +                + G E +EGI LD     + +   A   A
Sbjct: 458 SRLWKPGNIKYLLEDNRGKEENGDPKTTSKRAKGLEQIEGIFLDT----SNISFDAEPSA 513

Query: 362 FSKMTNLRLLKI-CN-------LQLPNG-LEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
           F  M NLRLLKI C+       +  PNG L YL N LRLL W  YPL+ LP N      +
Sbjct: 514 FENMLNLRLLKIYCSNPEIYPVINFPNGSLRYLPNELRLLHWENYPLQSLPQNFDPKHLV 573

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI- 471
           EI M  S++ +LW   K+L+ LK + L HS+ L+ + D   AP+LE + L+GCTRL    
Sbjct: 574 EINMPNSQLQKLWGKTKNLEMLKTVRLCHSQQLVDISDLWEAPHLEVIDLQGCTRLQSFP 633

Query: 472 HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDL 531
           +    LH  L +LN+  C  +  +P   +  +++KL+L+   T I  L  LST       
Sbjct: 634 NTGQFLH--LRVLNLSHCIEIKKIPE--VPPNIKKLHLQG--TGIIALP-LSTTFEPNHT 686

Query: 532 KFREFPEIVEHMEHLSELHLEGTAIRGLPLS---IELLSGLVLLNLKNCRSLEILPVTVS 588
           K   F  + E+      L LE   +R L +S    ++L  L+ L+LK+C  L+ LP  V 
Sbjct: 687 KLLNF--LTENPGLSDALKLE--RLRSLLISSSYCQVLGKLIRLDLKDCSRLQSLPNMV- 741

Query: 589 NLKCLRSLKLSGCSKLKK---FPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNL 645
           NL+ L  L+LSGCSKL+    FP       +L EL++  T++++VP   +L   LEL N 
Sbjct: 742 NLEFLEVLELSGCSKLETIQGFP------PNLKELYIARTAVRQVP---QLPQSLELFNA 792

Query: 646 SDCKNLVRLPSSIIALKSLKTL---NLSGCFKL 675
             C +L      +I L S K L     S CF L
Sbjct: 793 HGCLSL-----ELICLDSSKLLMHYTFSNCFNL 820



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 147/346 (42%), Gaps = 93/346 (26%)

Query: 549 LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
           LH E   ++ LP + +    LV +N+ N + L+ L     NL+ L++++L    +L    
Sbjct: 553 LHWENYPLQSLPQNFDP-KHLVEINMPNSQ-LQKLWGKTKNLEMLKTVRLCHSQQLV--- 607

Query: 609 EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
                  D+S+L+       E P        LE+++L  C  L   P++   L  L+ LN
Sbjct: 608 -------DISDLW-------EAP-------HLEVIDLQGCTRLQSFPNTGQFLH-LRVLN 645

Query: 669 LSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLC 728
           LS C +++ +PE    I+ L        A+P ST++                 P+ + L 
Sbjct: 646 LSHCIEIKKIPEVPPNIKKLHLQGTGIIALPLSTTFE----------------PNHTKLL 689

Query: 729 SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKR 788
           +          L E    SD   L  L+ L +S +S+  +      L KL+ ++L+DC R
Sbjct: 690 NF---------LTENPGLSDALKLERLRSLLIS-SSYCQV------LGKLIRLDLKDCSR 733

Query: 789 LQSLPQL-----------------------PPNIRQVRVNGCA--SLVTLLDALKLCKSD 823
           LQSLP +                       PPN++++ +   A   +  L  +L+L  + 
Sbjct: 734 LQSLPNMVNLEFLEVLELSGCSKLETIQGFPPNLKELYIARTAVRQVPQLPQSLELFNAH 793

Query: 824 STM---IACLDSLKLLGNKS------LAFSMLREYLEAVSNTRQHL 860
             +   + CLDS KLL + +      L+  ++ ++L  V    QH+
Sbjct: 794 GCLSLELICLDSSKLLMHYTFSNCFNLSPQVINDFLVKVLANAQHI 839



 Score = 47.4 bits (111), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 2/81 (2%)

Query: 229  DILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPV-IGIRVLIEKCLITV 287
            ++ ++++DGLQE++K +FL IA  F   D   V   +       V  G++VL ++ LI+V
Sbjct: 1025 EVWRVNYDGLQEIDKALFLYIAGLFNDEDVGLVAPLIANIIDMDVSYGLKVLADRSLISV 1084

Query: 288  HNN-TLWMHDLLQELGQQIVQ 307
             +N  + MH LL+++G++I+ 
Sbjct: 1085 SSNGEIVMHYLLRQMGKEILH 1105


>gi|449482307|ref|XP_004156243.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1857

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 197/429 (45%), Positives = 278/429 (64%), Gaps = 4/429 (0%)

Query: 4   RCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKG 63
           R  ++  L+  G  DVR +GI GMGG+GKTTIAR++Y  +SH F+   FLDNV+E   K 
Sbjct: 210 RLHQINMLLGIGLDDVRFVGIWGMGGIGKTTIARIIYKSVSHLFDGCYFLDNVKEALKKE 269

Query: 64  GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNR 123
            + SLQ++LL+  L   +  I N  DG  ++  R+   K L+++DDV  + QLQ LAG  
Sbjct: 270 DIASLQQKLLTGTLMKRNIDIPNA-DGATLIKRRISNIKALIILDDVNHLSQLQKLAGGL 328

Query: 124 EWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLS 183
           +WFGSGSR+I+T+RDEHLL +HG++  Y    L  +E LQLF+ KAF      +E   + 
Sbjct: 329 DWFGSGSRVIVTTRDEHLLISHGIERRYNVEVLKIEEGLQLFSQKAFGEEHTKEEYFDVC 388

Query: 184 ARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEK 243
           ++++ YAGGLPLA+EVLGS L  + +++W + +E+L      EI++ L+IS+  L++ E+
Sbjct: 389 SQVVDYAGGLPLAIEVLGSSLRNKPMEDWINAVEKLWEVRDKEIIEKLKISYYMLEKSEQ 448

Query: 244 KIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQ 303
           KIFLDIACFFK   +      LE  GF  V+G+ +L EKCLIT  ++ L MHDL+QE+GQ
Sbjct: 449 KIFLDIACFFKRKSKKQAIEILESFGFPAVLGLEILEEKCLITTPHDKLHMHDLIQEMGQ 508

Query: 304 QIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFS 363
           +IV++    E  KR+RLW  E+V   L+   GTE +EGI++D    E E +L  +AKAFS
Sbjct: 509 EIVRQNFLNEPEKRTRLWLREDVNLALSRDQGTEAIEGIMMD-LDEEGESHL--NAKAFS 565

Query: 364 KMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGE 423
           +MTNLR+LK+ N+ L   +EYLS++LR L W GYPLK LPSN      +E+ +  S I  
Sbjct: 566 EMTNLRVLKLNNVHLSEEIEYLSDQLRFLNWHGYPLKTLPSNFNPTNLLELELPNSSIHH 625

Query: 424 LWKGIKHLD 432
           LW   K LD
Sbjct: 626 LWTASKELD 634



 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 278/821 (33%), Positives = 423/821 (51%), Gaps = 72/821 (8%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEAS----GFLDNV 56
            M  R   ++ L+  GS+DVR IGI GM G+GKTT+A + Y  I   F ++     FL  V
Sbjct: 773  MPLRLRTMKMLLGLGSNDVRFIGIVGMSGIGKTTLAEMTYLRIFKPFVSALRKPYFLHFV 832

Query: 57   -REISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQR-KKVLLVIDDVVDVK 114
             R I S    +  Q       LK  D  + +   G++++   L   K VL+V D + +  
Sbjct: 833  GRSIVS----LQQQLLDQLAFLKPIDIQVLDENHGVELIMQHLSSLKNVLIVFDGITERS 888

Query: 115  QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGV-DEV--YKPHGLNYDEALQLFNMKAFK 171
            QL+ LAG+ +WFG+GSRIIIT+ ++++       D+V  Y    L+++ A  LF   AF 
Sbjct: 889  QLEMLAGSPDWFGAGSRIIITTTNKNIFHHPNFKDKVQEYNVELLSHEAAFSLFCKLAFG 948

Query: 172  TYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEIL-DI 230
             +   Q    L   +I   G LPLALE +   L G+++D W  TL+         I  D+
Sbjct: 949  DHPHTQNMDDLCNEMIEKVGRLPLALEKIAFSLYGQNIDVWEHTLKNFHQVVYDNIFSDV 1008

Query: 231  LQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGF-HPVIGIRVLIEKCLITVHN 289
            L+ S++GL+   ++IFLD+ACF  G   D V   L+G G+  P   +++L+++CLI + +
Sbjct: 1009 LKSSYEGLEAESQQIFLDLACFLNGEKVDRVIQILQGFGYTSPQTNLQLLVDRCLIDILD 1068

Query: 290  NTLWMHDLLQELGQQIVQRQSPEELG--KRSRLWKEEEVCHVLTESTGTELVEGIVLDNY 347
              + MH L+  +GQ+IV R    ELG  +++R+W  ++   +  E+   + + GIV+D  
Sbjct: 1069 GHIQMHILILCMGQEIVHR----ELGNCQQTRIWLRDDARRLFHENNELKYIRGIVMDLE 1124

Query: 348  HHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
              E  V     AKAF+ M+ LR+L+I N+QL   +E LSN+L LL W GYP K+LPS  Q
Sbjct: 1125 EEEELVL---KAKAFADMSELRILRINNVQLSEDIECLSNKLTLLNWPGYPSKYLPSTFQ 1181

Query: 408  MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
                +E+++  S +  LW G ++   LK +  S S+ L+  P+F+ AP L +LIL  C R
Sbjct: 1182 PPSLLELHLPGSNVERLWNGTQNFKNLKEIDASDSKFLVETPNFSEAPKLRRLILRNCGR 1241

Query: 468  LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDV 527
            L ++H S+   ++LI+L+M+ C S  +                S P T   LK L    V
Sbjct: 1242 LNKVHSSINSLHRLILLDMEGCVSFRSF---------------SFPVTCKSLKTL----V 1282

Query: 528  SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
              +     FPE    M +L+ELH++GT+I  L  SI  L GLVLLNL+NC  L  LP  +
Sbjct: 1283 LSNCGLEFFPEFGCVMGYLTELHIDGTSINKLSPSITNLLGLVLLNLRNCIRLSSLPTEI 1342

Query: 588  SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
              L  L++L L+GC  L K P  +R +K L EL + GTSI  +P     L  L +LN   
Sbjct: 1343 CRLSSLKTLILNGCKNLDKIPPCLRYVKHLEELDIGGTSISTIP----FLENLRILNCER 1398

Query: 648  CKNLVRLPSSIIA---LKSLKTLNLSGCFKL-ENVPETLGQIESLEELDISGTAVPHSTS 703
             K+ +    + +A   L+SL  LNLS C  + E++P  L    SLE LD+S       + 
Sbjct: 1399 LKSNIWHSLAGLAAQYLRSLNDLNLSDCNLVDEDIPNDLELFSSLEILDLSSNHFERLSE 1458

Query: 704  WYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGA--LPSDIGNLCSLKELYLS 761
                               S+  L +L+ L L DCN ++    LP  I  +   K L + 
Sbjct: 1459 -------------------SIKQLINLKVLYLNDCNKLKQVPKLPKSIKYVGGEKSLGML 1499

Query: 762  KNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
            + S  S   + + +S   + +        ++P+LP +IR V
Sbjct: 1500 RTSQGSPVCTRSEMSPSPSRDHSFTCTEYAVPKLPRSIRSV 1540



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/237 (35%), Positives = 129/237 (54%), Gaps = 12/237 (5%)

Query: 1    MDSRCEKLRFLMD-SGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            M+++ +K+  L+D   S D+  +GI G  G+GKTTIA VVY+ I  EF++  FL     +
Sbjct: 1622 MENQVKKVCNLLDLERSKDILFVGIFGSSGIGKTTIAEVVYNTIIDEFQSGCFL----YL 1677

Query: 60   SSK-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            SSK   LV LQ Q+LS LL   +  IW+   G  ++   +  +KV++V+D V +  Q++ 
Sbjct: 1678 SSKQNSLVPLQHQILSHLLS-KETKIWDEDHGAQLIKHHMSNRKVVIVLDGVDERNQIEK 1736

Query: 119  LAGNREWFGSGSRIIITSRDE---HLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP 175
            L G+  WF  GSR+IIT+ +    H L      + YK   L+ + A  LF   AF     
Sbjct: 1737 LVGSPNWFAPGSRVIITATNRDVLHQLNYRDQVQEYKVELLSRESAYSLFCKNAFGDGPS 1796

Query: 176  LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQ 232
             +    L + I+   G LPLAL  +GS+L  + +D W  TL+RL+ E  +    IL+
Sbjct: 1797 DKN--DLCSEIVEKVGRLPLALRTIGSYLHNKDLDVWNETLKRLDEEEQNYFDTILK 1851


>gi|357468821|ref|XP_003604695.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
 gi|355505750|gb|AES86892.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
          Length = 1121

 Score =  370 bits (949), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 265/701 (37%), Positives = 396/701 (56%), Gaps = 49/701 (6%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++ R  KL  L+D GS+D V+M+GI G GG+GKTT+ + +Y+ I+H+FE   FL NVRE 
Sbjct: 201 LEPRVLKLYSLLDIGSNDKVQMLGIYGTGGMGKTTLGKAIYNFIAHQFECLCFLPNVREN 260

Query: 60  SSK-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
           S+K  GL  LQ ++L + + L +    ++ +GI ++  RLQRKKVLL++DD+  +KQLQ 
Sbjct: 261 STKVDGLEYLQSKVLFKTIGL-EIRFGDISEGIPIIKKRLQRKKVLLILDDIDKLKQLQV 319

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFK--TYQPL 176
           LAG  +WFG GSR+IIT+RD+HLLK HG+D  Y+  GLN +EALQL   KAFK  T  P 
Sbjct: 320 LAGEPDWFGLGSRVIITTRDKHLLKCHGIDITYEVDGLNENEALQLLRWKAFKNSTVNPS 379

Query: 177 QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
            E +    R++ YA GLPLALEV+GS L G+ +++W+S L+  E  P  EI  IL +SF+
Sbjct: 380 YEGIL--NRVVTYASGLPLALEVVGSNLFGKDIEKWKSLLDEYERIPNKEIQKILIVSFN 437

Query: 237 GLQELEKKIFLDIACFFKGNDRDYVTNFL-EGCGFHPVIGIRVLIEKCLITVHNNTLWMH 295
            L E E+ +FLDIAC FKG   D V   L    G+     I  L++K LI +  + + +H
Sbjct: 438 NLGEYEQSVFLDIACCFKGYSLDEVEYILCAHYGYCMKYHIGKLVDKSLIKIQLSRVTLH 497

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DL++ +G++IV+++S  E GKR+RLW  E++  VL E+TGT   E I LD +    EV +
Sbjct: 498 DLIEIMGKEIVRKESVIEPGKRTRLWFCEDIVRVLKENTGTGNTEIIHLD-FSSIKEV-V 555

Query: 356 CASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
             + KAF KM  L+ L I +        Y  + LR+L W+ YP + LPS+        I+
Sbjct: 556 DWNGKAFKKMKILKTLVIKSGHFSKAPVYFPSTLRVLEWQRYPSQCLPSS--------IF 607

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
              S+I  L+   K  + LK++   + E LI  PD +  PNLEK+  + C  L  IH S 
Sbjct: 608 NKASKIS-LFSDYK-FENLKILKFDYCEYLIDTPDVSCLPNLEKISFQSCKNLVTIHNST 665

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
              NKL  L+++ C  L   P       LE ++L++L   IS  K L +           
Sbjct: 666 GFLNKLKFLSVEGCCKLRYFP------PLELISLENL--QISRCKSLQS----------- 706

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
           FP+I+  +E+L  L + GT+I+G P+S + L+GL  ++++    +  LP  +  +  L S
Sbjct: 707 FPKILGKIENLKYLSIYGTSIKGFPVSFQNLTGLCNISIEG-HGMFRLPSFILKMPKLSS 765

Query: 596 LKLSGCSKL-----KKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKN 650
           + ++G S L      K   +V S     +L  +  S + +P  + L   +  L LS   N
Sbjct: 766 ISVNGYSHLLPKKNDKLSFLVSSTVKYLDLIRNNLSDECLPILLRLFANVTYLYLSG-NN 824

Query: 651 LVRLPSSIIALKSLKTLNLSGCFKLE---NVPETLGQIESL 688
              LP  +   + L +L L+ C  L+    +P TL  + +L
Sbjct: 825 FKILPECLKECRFLWSLQLNECKSLQEIRGIPPTLKNMSAL 865



 Score = 70.5 bits (171), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 35/250 (14%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
           L+ LK   C  L   P+ V  + +L ++ F    ++  + +S   L KL+ L++  C  L
Sbjct: 624 LKILKFDYCEYLIDTPD-VSCLPNLEKISFQSCKNLVTIHNSTGFLNKLKFLSVEGCCKL 682

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP------HSTSWY 705
              P   + L SL+ L +S C  L++ P+ LG+IE+L+ L I GT++        + +  
Sbjct: 683 RYFPP--LELISLENLQISRCKSLQSFPKILGKIENLKYLSIYGTSIKGFPVSFQNLTGL 740

Query: 706 SYIPI---NLMR-KSVALKLPSLSGLC---------------------SLRKLNLTDCNL 740
             I I    + R  S  LK+P LS +                      +++ L+L   NL
Sbjct: 741 CNISIEGHGMFRLPSFILKMPKLSSISVNGYSHLLPKKNDKLSFLVSSTVKYLDLIRNNL 800

Query: 741 MEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIR 800
            +  LP  +    ++  LYLS N+F  LP  +     L +++L +CK LQ +  +PP ++
Sbjct: 801 SDECLPILLRLFANVTYLYLSGNNFKILPECLKECRFLWSLQLNECKSLQEIRGIPPTLK 860

Query: 801 QVRVNGCASL 810
            +    C SL
Sbjct: 861 NMSALRCGSL 870


>gi|2853079|emb|CAA16929.1| resistance protein RPP5-like [Arabidopsis thaliana]
 gi|7268748|emb|CAB78954.1| resistance protein RPP5-like [Arabidopsis thaliana]
          Length = 1715

 Score =  369 bits (948), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 328/1067 (30%), Positives = 507/1067 (47%), Gaps = 176/1067 (16%)

Query: 3    SRCEKLRFLM-DSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV-REIS 60
            SR  K+ +L+       +R +GI GM G+GKTT+AR  YD +S +FEAS F+++  RE  
Sbjct: 148  SRLTKIEYLLCKQPGCIIRSLGIWGMAGIGKTTLARAAYDQLSRDFEASCFIEDFDREFQ 207

Query: 61   SKG--GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
             KG  GL+  Q  +  Q+ +L+            +L   L+ K++LLV+DDV       S
Sbjct: 208  EKGFFGLLEKQLGVNPQVTRLS------------ILLKTLRSKRILLVLDDVRKPLGATS 255

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
                 +W G GS II+TS+D+ +L    V+E+YK  GLN  E+LQLF+  AF    P Q 
Sbjct: 256  FLCEFDWLGPGSLIIVTSQDKQVLVQCQVNEIYKVQGLNKHESLQLFSRCAFGKDVPDQN 315

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             ++LS + + YA G PLAL + G  L G++  + +S +  L+     +I   L+ S+D L
Sbjct: 316  LLELSMKFVDYANGNPLALSICGKNLKGKTPLDMKSVVLELKRHLSDKIFVKLKSSYDAL 375

Query: 239  QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
               EK+IFLDI   F+G + D V   L GCGF P +GI  L++K  +TV  N + +++L+
Sbjct: 376  SVSEKEIFLDIVFTFRGANVDNVMQSLAGCGFFPRVGIEALVDKSFVTVSENRVQVNNLI 435

Query: 299  QELGQQIVQRQSPEELGKRSRLWKEE------EVCHVLTESTGTELVEGIVLDNYHHENE 352
             ++G +I+  QS +E+G   R           E   +     G E V+ I LD  +   +
Sbjct: 436  YDVGLKIINDQS-DEIGMCYRFVDASNSQSLIEHKEIRESEQGYEDVKAINLDTSNLPFK 494

Query: 353  VYLCASAKAFSKMTNLRLLKIC---------NLQLPNGLEYLSNRLRLLGWRGYPLKFLP 403
             ++     AF  M NLR L I          +L LP   ++L   LRLL W  YPL   P
Sbjct: 495  GHI-----AFQHMYNLRYLTIYSSINPTKDPDLFLPGDPQFLPPELRLLHWTCYPLHSFP 549

Query: 404  SNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
             N      +E+ M  S++ +LW G K+L+ LK + LS S  L+ + +   +PN+EK+ L+
Sbjct: 550  QNFGFQYLVELNMPCSKLKKLWGGTKNLEVLKRITLSCSVQLLNVDELQYSPNIEKIDLK 609

Query: 464  GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLP--------------------------- 496
            GC  L     +  L + L I+++  C  + + P                           
Sbjct: 610  GCLELQSFPDTGQLQH-LRIVDLSTCKKIKSFPKVPPSIRKLHLQGTGIRDLSSLNHSSE 668

Query: 497  GKILMKSLEKL------------------NLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
             + L + LE +                  +L SLP  +   + L  LD SG     E  +
Sbjct: 669  SQRLTRKLENVSSSNQDHRKQVLKLKDSSHLGSLPDIVI-FESLEVLDFSG---CSELED 724

Query: 539  IVEHMEHLSELHLEGTAIRGLPLSI-ELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
            I    ++L  L+L  TAI+ +P S+   +S LV L+++NC  L  LP+ +SN+K L  LK
Sbjct: 725  IQGFPQNLKRLYLAKTAIKEVPSSLCHHISKLVKLDMENCERLRDLPMGMSNMKYLAVLK 784

Query: 598  LSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSS-IELLTKLELLNLSDCKNLVRLPS 656
            LSGCS L+   E+ R++K   EL+L GT++KE PS+ +E L+++ LL+L +CK L  LP+
Sbjct: 785  LSGCSNLENIKELPRNLK---ELYLAGTAVKEFPSTLLETLSEVVLLDLENCKKLQGLPT 841

Query: 657  SIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYIPINLM 713
             +  L+ L  L LSGC KLE + +      +L EL ++GTA+   P S    + +    +
Sbjct: 842  GMSKLEFLVMLKLSGCSKLEIIVDL---PLNLIELYLAGTAIRELPPSIGDLALLDTLDL 898

Query: 714  RKSVALK-LP-SLSGLCSLRKLNLTDCNLME----------------------------- 742
            +    L+ LP  +  L  L+ L+L++C+ +E                             
Sbjct: 899  KNCNRLRHLPMEMHNLNPLKVLDLSNCSELEVFTSSLPKVRELRPAPTVMLLRSKLPFCF 958

Query: 743  -----------------GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELED 785
                               +P +I  + SLK L LS+N F  +P SI   SKLL++ L  
Sbjct: 959  FIFYEHRVTLSLYKARLQYIPEEIRWMPSLKTLDLSRNGFTEVPVSIKDFSKLLSLRLRY 1018

Query: 786  CKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLD-----SLKLLGNKS 840
            C+ L+SLPQLP +++ +  +GC+SL  +    K      T   C         ++L N +
Sbjct: 1019 CENLRSLPQLPRSLQLLNAHGCSSLQLITPDFKQLPRYYTFSNCFGLPSHMVSEVLAN-A 1077

Query: 841  LAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYA 900
             A    R+  + + N     S  +P     +  +Y   GSS  +    N   +  LVG+A
Sbjct: 1078 PAIVECRKPQQGLENALA-CSFCLPSPTSRDSKLYLQPGSSTMIIL--NPKTRSTLVGFA 1134

Query: 901  ICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFR--DKFGQA 945
            I       K+                    H   G+GFR  DK G A
Sbjct: 1135 ILVEVSFSKDF-------------------HDTAGLGFRWNDKKGHA 1162


>gi|357499629|ref|XP_003620103.1| Disease resistance-like protein GS3-4 [Medicago truncatula]
 gi|355495118|gb|AES76321.1| Disease resistance-like protein GS3-4 [Medicago truncatula]
          Length = 1075

 Score =  369 bits (947), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 274/771 (35%), Positives = 407/771 (52%), Gaps = 79/771 (10%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +  R  K+  L+  GS+D V+M+GI G GG+GKTT+A+ VY+ I+ +FE   FL NVRE 
Sbjct: 206 LQHRVLKVNSLLKVGSNDKVKMLGIYGPGGIGKTTLAKAVYNFIAGQFECVCFLHNVREN 265

Query: 60  SSKGGLVSLQRQLLSQL----LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQ 115
           S+K GL  LQ+ LLS++    +KLAD S     +GI ++  RLQ+KKVLL++DD+  +KQ
Sbjct: 266 SAKHGLEHLQKDLLSKIVGLDIKLADTS-----EGIPIIKQRLQQKKVLLILDDINKLKQ 320

Query: 116 LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP 175
           LQ++AG  +WFG+GSR+I+T+RD++LL +HG++  Y+ H LN  EAL+L   KAFK  Q 
Sbjct: 321 LQAMAGGTDWFGAGSRVIVTTRDKNLLASHGIEVTYETHELNKKEALELLRWKAFKAKQV 380

Query: 176 LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
                 +  R I YA GLPLALE+LGS L G+ ++EW S L+R E  P  EI  IL++SF
Sbjct: 381 DSSYECILNRAINYAAGLPLALEILGSNLYGKHIEEWNSLLDRYERIPSEEIQKILRVSF 440

Query: 236 DGLQELEKKIFLDIACFFKGNDRDYVTNFL-EGCGFHPVIGIRVLIEKCLITVHNNT-LW 293
           D L+E E+ +FLDIAC FKG     V + L    G      I VL++K L+ + N   + 
Sbjct: 441 DALEEDERSVFLDIACCFKGYKLKEVEDMLCAHYGQRMRYHIGVLVKKSLVKIINERFVT 500

Query: 294 MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
           +HDL++++G++IV+++SP+E GKRSRL   E++  VL E++GT  +E I LD      + 
Sbjct: 501 LHDLIEDMGKEIVRQESPKEPGKRSRLSFHEDIFQVLEENSGTSQIEIIRLD--FPLPQA 558

Query: 354 YLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGW---RGYPLKFLPSNLQMDK 410
            +        KM NL+ L +     P    +L + LR+L W   R  P +FLP NL + K
Sbjct: 559 IVEWKGDELKKMKNLKTLIVKTSFFPKPHVHLPDNLRVLEWHSLRDIPSEFLPKNLSICK 618

Query: 411 TIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYE 470
             +   C +         K    LKV+ L   + L  + D +G  NLE+   + C +L  
Sbjct: 619 LRK--SCPT-------SFKMFMVLKVLHLDECKRLREISDVSGLQNLEEFSFQRCKKLRT 669

Query: 471 IHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGD 530
           IH S+   NKL ILN + C  L + P  I + SLE L L                  S  
Sbjct: 670 IHDSIGFLNKLKILNAEGCRKLKSFP-PIQLTSLELLRL------------------SYC 710

Query: 531 LKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
            + R FPEI+  ME+L  + L+ T+I+ LP S + LSGL  L L   R    LP ++  +
Sbjct: 711 YRLRNFPEILGKMENLESIFLKETSIKELPNSFQNLSGLRNLLLDGFRMFLRLPSSILVM 770

Query: 591 KCLRSLKLSGCSKLKK---------------------------FPEIVRSMKDLSELFLD 623
             L  + + G   L K                            P I +   +++ L L 
Sbjct: 771 PKLSWVLVQGRHLLPKQCDKPSSMVSSNVKSLVLIECNLTGESLPIIFKWFANVTNLNLS 830

Query: 624 GTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLG 683
            ++I  +P  I+ L  LE L L  CK L  + +    LK L  +N   C  L +   ++ 
Sbjct: 831 KSNITILPECIKELRSLERLYLDCCKLLQEIRAIPPNLKFLSAIN---CESLSSSCRSML 887

Query: 684 QIESLEELDISGTAVPHSTSWYSYIPINLMRKSVAL----KLPSLSGLCSL 730
             + L E+  +   +P +     +      R+ ++     KLPS+S  C++
Sbjct: 888 LDQELHEVGDTMFRLPGTLRIPRWFEHQSTRQPISFWFHNKLPSISLFCTI 938



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 187/452 (41%), Gaps = 97/452 (21%)

Query: 551  LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI 610
            LE  ++R +P      S  +  NL  C+  +  P +      L+ L L  C +L++  + 
Sbjct: 597  LEWHSLRDIP------SEFLPKNLSICKLRKSCPTSFKMFMVLKVLHLDECKRLREISD- 649

Query: 611  VRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNL 669
            V  +++L E  F     ++ +  SI  L KL++LN   C+ L   P   I L SL+ L L
Sbjct: 650  VSGLQNLEEFSFQRCKKLRTIHDSIGFLNKLKILNAEGCRKLKSFPP--IQLTSLELLRL 707

Query: 670  SGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYIP--------INLMRKSVA 718
            S C++L N PE LG++E+LE + +  T++   P+S    S +         + L   S  
Sbjct: 708  SYCYRLRNFPEILGKMENLESIFLKETSIKELPNSFQNLSGLRNLLLDGFRMFLRLPSSI 767

Query: 719  LKLPSLSGL--------------------CSLRKLNLTDCNLMEGALPSDIGNLCSLKEL 758
            L +P LS +                     +++ L L +CNL   +LP       ++  L
Sbjct: 768  LVMPKLSWVLVQGRHLLPKQCDKPSSMVSSNVKSLVLIECNLTGESLPIIFKWFANVTNL 827

Query: 759  YLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALK 818
             LSK++   LP  I  L  L  + L+ CK LQ +  +PPN++ +    C SL +      
Sbjct: 828  NLSKSNITILPECIKELRSLERLYLDCCKLLQEIRAIPPNLKFLSAINCESLSS------ 881

Query: 819  LCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGS-EIPEWFMYQN 877
             C+S                      +L + L  V +T   L    PG+  IP WF +Q 
Sbjct: 882  SCRS---------------------MLLDQELHEVGDTMFRL----PGTLRIPRWFEHQ- 915

Query: 878  EGSSITVTRPSNLYNKKKLVGYAICC------------VFHVLKNS-RGNNCFGSYPTHQ 924
                 +  +P + +   KL   ++ C            +F   K +  G  CF   PT+ 
Sbjct: 916  -----STRQPISFWFHNKLPSISLFCTIGCKYHPNVTSIFSFFKITINGYECFREGPTNF 970

Query: 925  LNCHI-GHGIYGIGFR----DKFGQAGSDHLW 951
                I  +  Y +G +    D+ G+A     W
Sbjct: 971  PYIKIEANHTYLVGLKLLDLDRLGEAFLKREW 1002


>gi|357456941|ref|XP_003598751.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355487799|gb|AES69002.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1082

 Score =  369 bits (946), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 233/593 (39%), Positives = 359/593 (60%), Gaps = 32/593 (5%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR  ++  L+  GS +   M+GI G+GG+GK+T AR V++LI+ +FE+  FL  +RE 
Sbjct: 236 LESRMLEVTSLLGLGSDERTNMVGIYGIGGIGKSTTARAVHNLIADQFESVCFLAGIRER 295

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           +   GL  LQ  LLS++L   D  + +V+ GI ++  RLQRKKVLL++DDV  V+ L++L
Sbjct: 296 AINHGLAHLQETLLSEILGEKDIKVGDVYRGISIIKRRLQRKKVLLILDDVDKVEHLRAL 355

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG G++IIIT+RD+HLL THG+ +VYK   LN ++A +LF+  AFK  + +  C
Sbjct: 356 AGGHDWFGLGTKIIITTRDKHLLATHGIVKVYKVKELNNEKAFELFSWHAFKN-KKIDPC 414

Query: 180 -VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
            V ++ R + Y  GLPLALEV+GS L G+S+D W+S L++ E     +I + L++S+D L
Sbjct: 415 YVDIAKRAVSYCHGLPLALEVIGSHLFGKSLDVWKSLLDKYERVLRKDIHETLKVSYDDL 474

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT-LWMHDL 297
            E EK IFLDIACFF      YV   L   GFH   GI+VL +K LI +  N+ + MHDL
Sbjct: 475 DEDEKGIFLDIACFFNSYKIGYVKEILYLHGFHADDGIQVLTDKSLIKIDANSCVRMHDL 534

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           +Q +G++IV+++S  E G+RSRLW  +++ HVL E+ GT+ +E +++ N   + +V  C 
Sbjct: 535 IQGMGREIVRQESTLEPGRRSRLWFSDDIVHVLEENKGTDTIE-VIIANLCKDRKVKWC- 592

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
             KAF +M NLR+L I N +   G + L N LR+L W G+    LPS+      + + + 
Sbjct: 593 -GKAFGQMKNLRILIIRNARFSRGPQILPNSLRVLDWSGHESSSLPSDFNPKNLVLLSLR 651

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSEN---LIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
            S +    K  K L+  + +I    E+   L  +P  +  PNL  L L+ CT L+ IH S
Sbjct: 652 ESCL----KRFKLLNVFETLIFLDFEDCKFLTEIPSLSRVPNLGSLCLDYCTNLFRIHDS 707

Query: 475 LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFR 534
           +   +KL++L+ K C  L +L   + + SLE                  TLD++G  +  
Sbjct: 708 VGFLDKLVLLSAKRCIQLQSLVPCMNLPSLE------------------TLDLTGCSRLE 749

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
            FPE++  ME++ +++L+GT +  LP++I  L GL  L L++C+ +  +P  V
Sbjct: 750 SFPEVLGVMENIKDVYLDGTNLYQLPVTIGNLVGLKRLFLRSCQRMIQIPSYV 802



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 65/98 (66%), Gaps = 1/98 (1%)

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
           S+  L  LVLL+ K C  L+ L V   NL  L +L L+GCS+L+ FPE++  M+++ +++
Sbjct: 707 SVGFLDKLVLLSAKRCIQLQSL-VPCMNLPSLETLDLTGCSRLESFPEVLGVMENIKDVY 765

Query: 622 LDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSII 659
           LDGT++ ++P +I  L  L+ L L  C+ ++++PS ++
Sbjct: 766 LDGTNLYQLPVTIGNLVGLKRLFLRSCQRMIQIPSYVL 803



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 9/132 (6%)

Query: 568 GLVLLNLKNC--RSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLD-G 624
            LVLL+L+    +  ++L V     + L  L    C  L + P + R + +L  L LD  
Sbjct: 644 NLVLLSLRESCLKRFKLLNV----FETLIFLDFEDCKFLTEIPSLSR-VPNLGSLCLDYC 698

Query: 625 TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQ 684
           T++  +  S+  L KL LL+   C  L  L   +  L SL+TL+L+GC +LE+ PE LG 
Sbjct: 699 TNLFRIHDSVGFLDKLVLLSAKRCIQLQSLVPCM-NLPSLETLDLTGCSRLESFPEVLGV 757

Query: 685 IESLEELDISGT 696
           +E+++++ + GT
Sbjct: 758 MENIKDVYLDGT 769



 Score = 47.0 bits (110), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 30/225 (13%)

Query: 569 LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIK 628
           L++ N +  R  +ILP +      LR L  SG  +    P      K+L  L L  + +K
Sbjct: 605 LIIRNARFSRGPQILPNS------LRVLDWSG-HESSSLPSDFNP-KNLVLLSLRESCLK 656

Query: 629 EVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
                + +   L  L+  DCK L  +PS +  + +L +L L  C  L  + +++G ++ L
Sbjct: 657 RF-KLLNVFETLIFLDFEDCKFLTEIPS-LSRVPNLGSLCLDYCTNLFRIHDSVGFLDKL 714

Query: 689 EELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSD 748
             L     +        S +P         + LPSL        L+LT C+ +E + P  
Sbjct: 715 VLL-----SAKRCIQLQSLVP--------CMNLPSL------ETLDLTGCSRLE-SFPEV 754

Query: 749 IGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
           +G + ++K++YL   +   LP +I +L  L  + L  C+R+  +P
Sbjct: 755 LGVMENIKDVYLDGTNLYQLPVTIGNLVGLKRLFLRSCQRMIQIP 799


>gi|334186704|ref|NP_193687.3| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658794|gb|AEE84194.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1744

 Score =  369 bits (946), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 318/1021 (31%), Positives = 495/1021 (48%), Gaps = 155/1021 (15%)

Query: 3    SRCEKLRFLM-DSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV-REIS 60
            SR  K+ +L+       +R +GI GM G+GKTT+AR  YD +S +FEAS F+++  RE  
Sbjct: 173  SRLTKIEYLLCKQPGCIIRSLGIWGMAGIGKTTLARAAYDQLSRDFEASCFIEDFDREFQ 232

Query: 61   SKG--GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
             KG  GL+  Q  +  Q+ +L+            +L   L+ K++LLV+DDV       S
Sbjct: 233  EKGFFGLLEKQLGVNPQVTRLS------------ILLKTLRSKRILLVLDDVRKPLGATS 280

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
                 +W G GS II+TS+D+ +L    V+E+YK  GLN  E+LQLF+  AF    P Q 
Sbjct: 281  FLCEFDWLGPGSLIIVTSQDKQVLVQCQVNEIYKVQGLNKHESLQLFSRCAFGKDVPDQN 340

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             ++LS + + YA G PLAL + G  L G++  + +S +  L+     +I   L+ S+D L
Sbjct: 341  LLELSMKFVDYANGNPLALSICGKNLKGKTPLDMKSVVLELKRHLSDKIFVKLKSSYDAL 400

Query: 239  QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
               EK+IFLDI   F+G + D V   L GCGF P +GI  L++K  +TV  N + +++L+
Sbjct: 401  SVSEKEIFLDIVFTFRGANVDNVMQSLAGCGFFPRVGIEALVDKSFVTVSENRVQVNNLI 460

Query: 299  QELGQQIVQRQSPEELGKRSRLWKEE------EVCHVLTESTGTELVEGIVLDNYHHENE 352
             ++G +I+  QS +E+G   R           E   +     G E V+ I LD  +   +
Sbjct: 461  YDVGLKIINDQS-DEIGMCYRFVDASNSQSLIEHKEIRESEQGYEDVKAINLDTSNLPFK 519

Query: 353  VYLCASAKAFSKMTNLRLLKIC---------NLQLPNGLEYLSNRLRLLGWRGYPLKFLP 403
             ++     AF  M NLR L I          +L LP   ++L   LRLL W  YPL   P
Sbjct: 520  GHI-----AFQHMYNLRYLTIYSSINPTKDPDLFLPGDPQFLPPELRLLHWTCYPLHSFP 574

Query: 404  SNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
             N      +E+ M  S++ +LW G K+L+ LK + LS S  L+ + +   +PN+EK+ L+
Sbjct: 575  QNFGFQYLVELNMPCSKLKKLWGGTKNLEVLKRITLSCSVQLLNVDELQYSPNIEKIDLK 634

Query: 464  GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLP--------------------------- 496
            GC  L     +  L + L I+++  C  + + P                           
Sbjct: 635  GCLELQSFPDTGQLQH-LRIVDLSTCKKIKSFPKVPPSIRKLHLQGTGIRDLSSLNHSSE 693

Query: 497  GKILMKSLEKL------------------NLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
             + L + LE +                  +L SLP  +   + L  LD SG     E  +
Sbjct: 694  SQRLTRKLENVSSSNQDHRKQVLKLKDSSHLGSLPDIVI-FESLEVLDFSG---CSELED 749

Query: 539  IVEHMEHLSELHLEGTAIRGLPLSI-ELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
            I    ++L  L+L  TAI+ +P S+   +S LV L+++NC  L  LP+ +SN+K L  LK
Sbjct: 750  IQGFPQNLKRLYLAKTAIKEVPSSLCHHISKLVKLDMENCERLRDLPMGMSNMKYLAVLK 809

Query: 598  LSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSS-IELLTKLELLNLSDCKNLVRLPS 656
            LSGCS L+   E+ R++K   EL+L GT++KE PS+ +E L+++ LL+L +CK L  LP+
Sbjct: 810  LSGCSNLENIKELPRNLK---ELYLAGTAVKEFPSTLLETLSEVVLLDLENCKKLQGLPT 866

Query: 657  SIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYIPINLM 713
             +  L+ L  L LSGC KLE + +      +L EL ++GTA+   P S    + +    +
Sbjct: 867  GMSKLEFLVMLKLSGCSKLEIIVDL---PLNLIELYLAGTAIRELPPSIGDLALLDTLDL 923

Query: 714  RKSVALK-LP-SLSGLCSLRKLNLTDCNLME----------------------------- 742
            +    L+ LP  +  L  L+ L+L++C+ +E                             
Sbjct: 924  KNCNRLRHLPMEMHNLNPLKVLDLSNCSELEVFTSSLPKVRELRPAPTVMLLRSKLPFCF 983

Query: 743  -----------------GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELED 785
                               +P +I  + SLK L LS+N F  +P SI   SKLL++ L  
Sbjct: 984  FIFYEHRVTLSLYKARLQYIPEEIRWMPSLKTLDLSRNGFTEVPVSIKDFSKLLSLRLRY 1043

Query: 786  CKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLD-----SLKLLGNKS 840
            C+ L+SLPQLP +++ +  +GC+SL  +    K      T   C         ++L N +
Sbjct: 1044 CENLRSLPQLPRSLQLLNAHGCSSLQLITPDFKQLPRYYTFSNCFGLPSHMVSEVLAN-A 1102

Query: 841  LAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYA 900
             A    R+  + + N     S  +P     +  +Y   GSS  +    N   +  LVG+A
Sbjct: 1103 PAIVECRKPQQGLENALA-CSFCLPSPTSRDSKLYLQPGSSTMIIL--NPKTRSTLVGFA 1159

Query: 901  I 901
            I
Sbjct: 1160 I 1160


>gi|12056928|gb|AAG48132.1|AF322632_1 putative resistance protein [Glycine max]
          Length = 1093

 Score =  368 bits (945), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 300/903 (33%), Positives = 451/903 (49%), Gaps = 149/903 (16%)

Query: 1   MDSRCEKLRFLMDSGS-SDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++ R  ++ +L+D+ S + V MIGICG+GG+GKTT+AR VY   +  F+ S FL NVRE 
Sbjct: 193 LEYRMLEVDWLLDATSLAGVHMIGICGIGGIGKTTLARAVYHSAAGHFDTSCFLGNVREN 252

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVI-DDVVDVKQLQS 118
           + K GLV LQ+ LL+++ +  +  + +V  GI ++   L RK++LL + DDV ++  L++
Sbjct: 253 AMKHGLVHLQQTLLAEIFRENNIRLTSVEQGISLIKKMLPRKRLLL-VLDDVCELDDLRA 311

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G+ +WFG GSR+IIT+RD HLLK HGVD+VY+   L   EAL+L   KAF+T +   +
Sbjct: 312 LVGSPDWFGPGSRVIITTRDRHLLKAHGVDKVYEVEVLANGEALELLCWKAFRTDRVHPD 371

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
            +    R I +A G+PLALE++GS L GR ++EW STL++ E  PP +I   L+ISFD L
Sbjct: 372 FINKLNRAITFASGIPLALELIGSSLYGRGIEEWESTLDQYEKNPPRDIHMALKISFDAL 431

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFL---EGCGFHPVIGIRVLIEKCLITV-HNNTLWM 294
             LEK++FLDIACFF G +   + + L    GC     IG   L+EK LI +  +  + M
Sbjct: 432 GYLEKEVFLDIACFFNGFELAEIEHILGAHHGCCLKFHIG--ALVEKSLIMIDEHGRVQM 489

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           HDL+Q++G++IV+++SPE  GKRSRLW  E++ HVL ++TGT  ++ I+LD    E  V 
Sbjct: 490 HDLIQQMGREIVRQESPEHPGKRSRLWSTEDIVHVLEDNTGTCKIQSIILDFSKSEKVVQ 549

Query: 355 LCASAKAFSKMTNLRLLKICNL--QLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
                 AF KM +LR L I  +  + P   +     L++L W G P K LPS+ + +K  
Sbjct: 550 W--DGMAFVKMISLRTLIIRKMFSKGPKNFQI----LKMLEWWGCPSKSLPSDFKPEKLA 603

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
            + + YS  G +   + +   ++V+     E L R PD +G P L++L    C  L EIH
Sbjct: 604 ILKLPYS--GFMSLELPNFLHMRVLNFDRCEFLTRTPDLSGFPILKELFFVFCENLVEIH 661

Query: 473 PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
            S+   +KL I+N + C+ L T P  I + SLE +NL    + +S               
Sbjct: 662 DSVGFLDKLEIMNFEGCSKLETFP-PIKLTSLESINLSHCSSLVS--------------- 705

Query: 533 FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKC 592
              FPEI+  ME+++ L LE TAI  LP SI  L  L  L L NC  ++ LP ++  L+ 
Sbjct: 706 ---FPEILGKMENITHLSLEYTAISKLPNSIRELVRLQSLELHNCGMVQ-LPSSIVTLRE 761

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEV------------PSSIELLTKL 640
           L  L +  C  L +F +    +K+ S L +  + +K+V             + +     +
Sbjct: 762 LEVLSICQCEGL-RFSKQDEDVKNKS-LLMPSSYLKQVNLWSCSISDEFIDTGLAWFANV 819

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
           + L+LS   N   LPS I   + L+ L L  C  L  +      +E+L  +  +      
Sbjct: 820 KSLDLS-ANNFTILPSCIQECRLLRKLYLDYCTHLHEIRGIPPNLETLSAIRCT------ 872

Query: 701 STSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
                     +L    +A+ L S    C LR+L L DC                      
Sbjct: 873 ----------SLKDLDLAVPLESTKEGCCLRQLILDDC---------------------- 900

Query: 761 SKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLC 820
                                     + LQ +  +PP+I  +    C SL          
Sbjct: 901 --------------------------ENLQEIRGIPPSIEFLSATNCRSLTA-------- 926

Query: 821 KSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGS 880
                              S    +L++ L    N R  L    PG+ IPEWF + + G 
Sbjct: 927 -------------------SCRRMLLKQELHEAGNKRYSL----PGTRIPEWFEHCSRGQ 963

Query: 881 SIT 883
           SI+
Sbjct: 964 SIS 966


>gi|351722733|ref|NP_001237766.1| functional candidate resistance protein KR1 [Glycine max]
 gi|18033111|gb|AAL56987.1|AF327903_1 functional candidate resistance protein KR1 [Glycine max]
          Length = 1124

 Score =  368 bits (945), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 259/701 (36%), Positives = 384/701 (54%), Gaps = 45/701 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR ++++ L+D GS DV  M+GI G+GG+GKTT+A  VY+ I+  FEA  FL NVRE 
Sbjct: 199 LESRIQEVKALLDVGSDDVVHMLGIHGLGGVGKTTLAAAVYNSIADHFEALCFLQNVRET 258

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S K GL  LQR LLS++    ++ +  V  GI ++  RL++KKVLL++DDV   +QLQ+L
Sbjct: 259 SKKHGLQHLQRNLLSEMA--GEDKLIGVKQGISIIEHRLRQKKVLLILDDVDKREQLQAL 316

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  + FG GSR+IIT+RD+ LL  HGV+  Y+ + LN + AL+L N KAFK  +     
Sbjct: 317 AGRPDLFGPGSRVIITTRDKQLLACHGVERTYEVNELNEEYALELLNWKAFKLEKVDPFY 376

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R   YA GLPLALEV+GS LSG+++++W S L+R +  P  EI +IL++S+D L+
Sbjct: 377 KDVLNRAATYASGLPLALEVIGSNLSGKNIEQWISALDRYKRIPNKEIQEILKVSYDALE 436

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVI-GIRVLIEKCLITVH-NNTLWMHDL 297
           E E+ IFLDIAC FK  D   V + L     H +   I VL+EK LI +  +  + +HDL
Sbjct: 437 EDEQSIFLDIACCFKKYDLAEVQDILHAHHGHCMKHHIGVLVEKSLIKISLDGYVTLHDL 496

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           ++++G++IV+++SP+E GKRSRLW   ++  VL E+ GT  +  I ++ Y    EV +  
Sbjct: 497 IEDMGKEIVRKESPQEPGKRSRLWLPTDIVQVLEENKGTSHIGIICMNFYSSFEEVEIQW 556

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK--TIEIY 415
              AF KM NL+ L I +     G ++    LR+L W  YP  + P + QM+K     + 
Sbjct: 557 DGDAFKKMKNLKTLIIRSGHFSKGPKHFPKSLRVLEWWRYPSHYFPYDFQMEKLAIFNLP 616

Query: 416 MCYSRIGELWKGI-KHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
            C     EL   + K    L  +     ++L  +PD +  P+L+KL  + C  LY IHPS
Sbjct: 617 DCGFTSRELAAMLKKKFVNLTSLNFDSCQHLTLIPDVSCVPHLQKLSFKDCDNLYAIHPS 676

Query: 475 LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFR 534
           +    KL IL+ + C+ L   P  I + SLE+L L        G  C S           
Sbjct: 677 VGFLEKLRILDAEGCSRLKNFP-PIKLTSLEQLKL--------GF-CHS---------LE 717

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGL--VLLNLKNCRSLEILPVTVSNLKC 592
            FPEI+  ME+++EL LE T ++  PLS + L+ L  VLL     ++     + +SN+  
Sbjct: 718 NFPEILGKMENITELDLEQTPVKKFPLSFQNLTRLETVLLCFPRNQANGCTGIFLSNICP 777

Query: 593 LR---------SLKLSGC--SKLKKFPEIVRSMKDLSELFLD----GTSIKEVPSSIELL 637
           ++          +   GC   K  +  E V      +  FLD      S    P ++   
Sbjct: 778 MQESPELINVIGVGWEGCLFRKEDEGAENVSLTTSSNVQFLDLRNCNLSDDFFPIALPCF 837

Query: 638 TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
             +  LNLS   N   +P  I   + L TL L+ C +L  +
Sbjct: 838 ANVMELNLSG-NNFTVIPECIKECRFLTTLYLNYCERLREI 877



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 157/396 (39%), Gaps = 100/396 (25%)

Query: 566 LSGLVLLNLKNC--RSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI--VRSMKDLSELF 621
           +  L + NL +C   S E+  +       L SL    C  L   P++  V  ++ LS  F
Sbjct: 607 MEKLAIFNLPDCGFTSRELAAMLKKKFVNLTSLNFDSCQHLTLIPDVSCVPHLQKLS--F 664

Query: 622 LDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPET 681
            D  ++  +  S+  L KL +L+   C  L   P   I L SL+ L L  C  LEN PE 
Sbjct: 665 KDCDNLYAIHPSVGFLEKLRILDAEGCSRLKNFPP--IKLTSLEQLKLGFCHSLENFPEI 722

Query: 682 LGQIESLEELDISGTAVPHSTSWYSYIPINLMR-KSVALKLPS----------LSGLCSL 730
           LG++E++ ELD+  T V      +     NL R ++V L  P           LS +C +
Sbjct: 723 LGKMENITELDLEQTPVKKFPLSFQ----NLTRLETVLLCFPRNQANGCTGIFLSNICPM 778

Query: 731 RK-------------------------------------LNLTDCNLMEGALPSDIGNLC 753
           ++                                     L+L +CNL +   P  +    
Sbjct: 779 QESPELINVIGVGWEGCLFRKEDEGAENVSLTTSSNVQFLDLRNCNLSDDFFPIALPCFA 838

Query: 754 SLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL 813
           ++ EL LS N+F  +P  I     L  + L  C+RL+ +  +PPN++      C SL + 
Sbjct: 839 NVMELNLSGNNFTVIPECIKECRFLTTLYLNYCERLREIRGIPPNLKYFYAEECLSLTSS 898

Query: 814 LDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWF 873
                 C+S                      +L + L     T  +L    PG++IPEWF
Sbjct: 899 ------CRS---------------------MLLSQELHEAGRTFFYL----PGAKIPEWF 927

Query: 874 MYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLK 909
            +Q      T   P + + + K    AIC   H++K
Sbjct: 928 DFQ------TSEFPISFWFRNKFPAIAIC---HIIK 954


>gi|15238807|ref|NP_197337.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332005160|gb|AED92543.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 900

 Score =  368 bits (945), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 248/696 (35%), Positives = 379/696 (54%), Gaps = 72/696 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVR--- 57
           +D+   +L  L+   S++V+M+GI G  G+GKTTIAR +++ +S  F+ + F++NV+   
Sbjct: 189 IDNHMRELDSLLCLESTEVKMVGIWGPAGIGKTTIARALFNRLSENFQHTIFMENVKGSS 248

Query: 58  ---EISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
              E+ + G  + LQ Q LS+++   D+    + D + ++  RLQ  KVL+V+DDV  ++
Sbjct: 249 RTSELDAYGFQLRLQEQFLSEVI---DHKHMKIHD-LGLVKERLQDLKVLVVLDDVDKLE 304

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL +L    +WFGSGSRII+T+ ++ LL+ HG+  +Y+    +  ++LQ+F   AF    
Sbjct: 305 QLDALVKQSQWFGSGSRIIVTTENKQLLRAHGITCIYELGFPSRSDSLQIFCQYAFGESS 364

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
               C++L+  I + AG LPLAL+VLGS L G S DE +S L RL      +I ++L++ 
Sbjct: 365 APDGCIELATEITKLAGYLPLALKVLGSSLRGMSKDEQKSALPRLRTSLNEDIRNVLRVG 424

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH--NNTL 292
           +DG+ + +K IFL IAC F G + DYV   L   G     G++VL  + LI +   N T+
Sbjct: 425 YDGIHDKDKVIFLHIACLFNGENVDYVKQILASSGLDVTFGLQVLTSRSLIHISRCNRTI 484

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            MH+LL++LG++IV  QS  E GKR  L    E+  VL ++TGT  V GI LD     NE
Sbjct: 485 TMHNLLEQLGREIVCEQSIAEPGKRQFLMDASEIYDVLADNTGTGAVLGISLD-ISKINE 543

Query: 353 VYLCASAKAFSKMTNLRLLKICN---------LQLPNGLEYLSNRLRLLGWRGYPLKFLP 403
           ++L  + +AF  M NL  L+            L LP GL+YL  +LRLL W  +P+  +P
Sbjct: 544 LFL--NERAFGGMHNLLFLRFYKSSSSKDQPELHLPRGLDYLPRKLRLLHWDAFPMTSMP 601

Query: 404 SNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
            +      + I +  S++ +LW+G + L  LK M LS SENL  +PD + A N+E+L L 
Sbjct: 602 LSFCPQFLVVINIRESQLEKLWEGTQPLRSLKQMDLSKSENLKEIPDLSKAVNIEELCLS 661

Query: 464 GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLS 523
            C  L  +  S+   NKL++L+MK C+ L  +P  + ++SL  LNL              
Sbjct: 662 YCGSLVMLPSSIKNLNKLVVLDMKYCSKLEIIPCNMDLESLSILNL-------------- 707

Query: 524 TLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEIL 583
                G  +   FPEI   +  LS   L  TAI                        E +
Sbjct: 708 ----DGCSRLESFPEISSKIGFLS---LSETAI------------------------EEI 736

Query: 584 PVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELL 643
           P TV++  CL +L +SGC  LK FP + ++++ L    L  T I+EVP  I+ L+KL  L
Sbjct: 737 PTTVASWPCLAALDMSGCKNLKTFPCLPKTIEWLD---LSRTEIEEVPLWIDKLSKLNKL 793

Query: 644 NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVP 679
            ++ C  L  + S I  L+ +KTL+  GC  + + P
Sbjct: 794 LMNSCMKLRSISSGISTLEHIKTLDFLGCKNIVSFP 829



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 126/275 (45%), Gaps = 46/275 (16%)

Query: 549 LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
           LH +   +  +PLS      LV++N++  + LE L      L+ L+ + LS    LK+ P
Sbjct: 590 LHWDAFPMTSMPLSF-CPQFLVVINIRESQ-LEKLWEGTQPLRSLKQMDLSKSENLKEIP 647

Query: 609 EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
           ++ +++                         +E L LS C +LV LPSSI  L  L  L+
Sbjct: 648 DLSKAVN------------------------IEELCLSYCGSLVMLPSSIKNLNKLVVLD 683

Query: 669 LSGCFKLENVPETLGQIESLEELDISG----TAVPHSTSWYSYIPINLMRKSVALKLP-S 723
           +  C KLE +P  +  +ESL  L++ G     + P  +S   ++ ++   ++   ++P +
Sbjct: 684 MKYCSKLEIIPCNM-DLESLSILNLDGCSRLESFPEISSKIGFLSLS---ETAIEEIPTT 739

Query: 724 LSGLCSLRKLNLTDCNLMEG--ALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNI 781
           ++    L  L+++ C  ++    LP  I      + L LS+     +P  I  LSKL  +
Sbjct: 740 VASWPCLAALDMSGCKNLKTFPCLPKTI------EWLDLSRTEIEEVPLWIDKLSKLNKL 793

Query: 782 ELEDCKRLQSLP---QLPPNIRQVRVNGCASLVTL 813
            +  C +L+S+        +I+ +   GC ++V+ 
Sbjct: 794 LMNSCMKLRSISSGISTLEHIKTLDFLGCKNIVSF 828


>gi|357462141|ref|XP_003601352.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355490400|gb|AES71603.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1545

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 246/698 (35%), Positives = 385/698 (55%), Gaps = 59/698 (8%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            ++ + E+   L+   S+DVR +G+ GMGG+GKTT+A+ +Y  +  +FE   FL+NVRE S
Sbjct: 636  IEKKYEETESLLKILSNDVRSLGLWGMGGIGKTTLAKDLYAKLCSQFERHCFLENVREES 695

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            +  GL   + +L S LL +  ++    +    +   RL  +K L V+DDV  ++Q++ L 
Sbjct: 696  TGHGLNGSRNKLFSTLLGIPRDA---PYVETPIFRRRLACEKSLTVLDDVTTLEQVEILN 752

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
             +    G GSRII+T+RD+ +        +Y+  GLN DE+L++F ++AF+   P     
Sbjct: 753  IDNICLGPGSRIIVTTRDKQICNQFNECAIYEVEGLNEDESLEVFCLEAFREKYPKIGYR 812

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
             LS R I Y GG PLAL+VLG+    +S + W S LE+L+  P   I D+L++SFD L  
Sbjct: 813  GLSKRAIGYCGGNPLALKVLGANFRTKSKEAWESELEKLKKIPNGRIHDVLKLSFDDLDR 872

Query: 241  LEKKIFLDIACFFKGN-----DRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWM 294
             +++IFLDIACFF         RD +T  L  C F  V GI VL+ K L+T+ H + + M
Sbjct: 873  TQQEIFLDIACFFNLELHACFGRDEITTLLNACNFFAVSGIEVLLYKALLTIEHYDQVTM 932

Query: 295  HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
            HDLL E+G++IV+++S ++ G RSRLW  +EV  +L  + GTE+VE I  D      ++Y
Sbjct: 933  HDLLVEMGREIVRKESLKDPGSRSRLWDPKEVYDLLKYNKGTEVVEVIFFDICDF-GDLY 991

Query: 355  LCASAKAFSKMTNLRLLKICN----------------LQLPNGLEYLSNRLRLLGWRGYP 398
            L  S+ +F  MTNLR L I N                + L  GLE+LS++LR L W  +P
Sbjct: 992  L--SSASFKSMTNLRYLHILNSLHNIFLTNGRNEGSIVHLHEGLEWLSDKLRYLKWESFP 1049

Query: 399  LKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLE 458
            L  LP++   +  +++ M  S++ +LW GI+ LD L  + L +S++L+ +PD + APNLE
Sbjct: 1050 LNSLPASFCAENLVQLSMTNSKLKKLWDGIQKLDNLMKIELDYSKDLVEIPDLSRAPNLE 1109

Query: 459  KLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISG 518
             + L  C  L ++H S+L   KL  L +  C  + +L   I  KSLE L+L +  + +  
Sbjct: 1110 LVSLSYCENLCKLHESILTAPKLSYLRLDGCKKIKSLKTNIHSKSLESLSLNNCSSLV-- 1167

Query: 519  LKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCR 578
                            EF    E+M   + L+L  TAI+ LP S+     L  LNL  C+
Sbjct: 1168 ----------------EFSVTSENM---TGLYLSCTAIQELPSSMWRNRKLTHLNLSKCK 1208

Query: 579  SLEILPVTVSNLKCLRSL---KLSGCSKLKKFP-----EIVRSMKDLSELFLDGTSIKEV 630
             L I    + N   L SL    LSGC+++  +        +RS+K L    ++  +++ +
Sbjct: 1209 KLNIAEKNLPNDPGLESLIFCDLSGCTQINTWNLWFIFHFIRSVKHLR--MVNCCNLESL 1266

Query: 631  PSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
            P +I+ ++ LE L L +C+ L  +P   ++L++L   N
Sbjct: 1267 PDNIQNISMLEWLCLDECRKLKFIPKLPVSLRNLSAAN 1304



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 119/493 (24%), Positives = 207/493 (41%), Gaps = 110/493 (22%)

Query: 602  SKLKKFPEIVRSMKDLSELFLD-GTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
            SKLKK  + ++ + +L ++ LD    + E+P  +     LEL++LS C+NL +L  SI+ 
Sbjct: 1070 SKLKKLWDGIQKLDNLMKIELDYSKDLVEIPD-LSRAPNLELVSLSYCENLCKLHESILT 1128

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK 720
               L  L L GC K++++   +   +SLE L ++  +     S  S     L     A++
Sbjct: 1129 APKLSYLRLDGCKKIKSLKTNIHS-KSLESLSLNNCSSLVEFSVTSENMTGLYLSCTAIQ 1187

Query: 721  -LP-SLSGLCSLRKLNLTDC---NLMEGALPSDIG------------------NLC---- 753
             LP S+     L  LNL+ C   N+ E  LP+D G                  NL     
Sbjct: 1188 ELPSSMWRNRKLTHLNLSKCKKLNIAEKNLPNDPGLESLIFCDLSGCTQINTWNLWFIFH 1247

Query: 754  ---SLKELYLSK-NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCAS 809
               S+K L +    +  SLP +I ++S L  + L++C++L+ +P+LP ++R +    C  
Sbjct: 1248 FIRSVKHLRMVNCCNLESLPDNIQNISMLEWLCLDECRKLKFIPKLPVSLRNLSAANCIY 1307

Query: 810  LVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAV---SNTRQHLSVVVPG 866
            +            D+  +           +S+  +M++ +L      SN  Q     +PG
Sbjct: 1308 V------------DTGSV----------QRSMLENMIQRHLTNFRDRSNCFQEF-FFLPG 1344

Query: 867  SEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRG-----NNCFGSYP 921
             +IP  F +Q+  +SI +           +    +CC+   +  S G     NN   +  
Sbjct: 1345 DQIPCEFYFQSTEASIVIP---------PIPKSDLCCLIFCIIFSEGLTFFYNNLCCTIY 1395

Query: 922  THQLNCHIGHGIYGIGFRDKFGQAGSDHL----WLLYL------SRQTCYDIRLPLESNL 971
             H+   H     +G   R  F    SDH+    W  Y       S +   D  L  E  L
Sbjct: 1396 QHKKEVHQWDTNWG-NERTLF----SDHVLIICWCHYNKLVELGSERGSDDYNLTFEFKL 1450

Query: 972  EPFESNHVNVSFEPWLGQGLE-VKMCGLHPVY---MD----------EVEELDQTTNQPS 1017
            + +  +      E W    +E +K CG+ PVY   +D          E+E   Q +++  
Sbjct: 1451 KEYVDDE-----EQW--STIEGIKGCGVFPVYDLGLDGSSSSRFETVEIESGVQISDESD 1503

Query: 1018 RFTVYNLNEFDQH 1030
            + + ++++E   H
Sbjct: 1504 QHSNFDIDELQHH 1516


>gi|124359513|gb|ABN05946.1| TIR [Medicago truncatula]
          Length = 1230

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 251/676 (37%), Positives = 379/676 (56%), Gaps = 57/676 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++ + E++  L ++GS+DVR +G+ GMGG+GKT +A+ +Y     +FE   FL+NVRE S
Sbjct: 304 IEEKYEEIELLTNNGSNDVRTLGLWGMGGIGKTALAKSLYGNYCSQFEYHCFLENVREES 363

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           ++ GL  ++++L S LLKL  ++ +  F+       RL+R K L+V+DDV  ++Q ++L 
Sbjct: 364 TRCGLNVVRKKLFSTLLKLGLDAPY--FE-TPTFKKRLERAKCLIVLDDVATLEQAENL- 419

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
             +   G GSR+I+T+RD  +        VY+   LN DE+LQLF   AF+     +   
Sbjct: 420 --KIGLGLGSRVIVTTRDRKICHQFEGFVVYEVKELNEDESLQLFCCNAFQEKHAKEGYE 477

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS   I Y  G PLAL+VLG+    +S +   S LE+++  P + I D+L++SF  L  
Sbjct: 478 ELSKSAIGYCRGNPLALKVLGANFRAKSKEACESELEKIKEIPYAGIHDVLKLSFYDLDR 537

Query: 241 LEKKIFLDIACFF--KGND------RDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNT 291
            ++ IFLDIACFF  K N       R+Y+ +    C F+P   I VL+ K L+T  + + 
Sbjct: 538 TQRDIFLDIACFFYPKINHFYCYGRREYIIDLFNACKFYPATSIEVLLHKSLMTFGYRDQ 597

Query: 292 LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
           + MHDL+ E+G++IV++++P++ GKRSRLW  E +  V   + GT+ VE I+ D      
Sbjct: 598 IEMHDLVVEMGREIVKQEAPKDPGKRSRLWDPELIYEVFKYNKGTDAVEVILFDT-SKIG 656

Query: 352 EVYLCASAKAFSKMTNLRLLKICN----LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
           +VYL  S+++F  M NLRLL I N    + L  GLE+LS++LR L W  +PL+ LPS   
Sbjct: 657 DVYL--SSRSFESMINLRLLHIANECNNVHLQEGLEWLSDKLRYLHWESFPLESLPSTFC 714

Query: 408 MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
               +++ M +S++ +LW  I+ LD L ++ L +SE+LI +PD + APNL+ L L  C  
Sbjct: 715 AQNLVQLSMTHSKLRKLWDRIQKLDNLTIIKLDNSEDLIEIPDLSRAPNLKILSLAYCVS 774

Query: 468 LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLP-------------- 513
           L+++HPS+    KL  L +K C  + +L   I  KSL++L+L                  
Sbjct: 775 LHQLHPSIFSAPKLRELCLKGCKKIESLVTDIHSKSLQRLDLTDCSSLVQFCVTSEEMKW 834

Query: 514 -----TTISGLKCL----STLDV--SGDLKFREFP----EIVEHMEHLSELHLEG-TAIR 557
                TTI     L    S LD    GD K   F          +E LS L+L G T I 
Sbjct: 835 LSLRGTTIHEFSSLMLRNSKLDYLDLGDCKKLNFVGKKLSNDRGLESLSILNLSGCTQIN 894

Query: 558 GLPLSIELLSGLVL--LNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMK 615
            L +S  L S   L  LNL+NC +LE LP  + N   LRSL L GC  L   P++  S++
Sbjct: 895 TLSMSFILDSARFLKYLNLRNCCNLETLPDNIQNCLMLRSLHLDGCINLNSLPKLPASLE 954

Query: 616 DLSEL---FLDGTSIK 628
           +LS +   +LD  SI+
Sbjct: 955 ELSAINCTYLDTNSIQ 970



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 186/482 (38%), Gaps = 128/482 (26%)

Query: 572  LNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP 631
            L LK C+ +E L VT  + K L+ L L+ CS L +F      MK LS   L GT+I E  
Sbjct: 791  LCLKGCKKIESL-VTDIHSKSLQRLDLTDCSSLVQFCVTSEEMKWLS---LRGTTIHEFS 846

Query: 632  SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
            S +   +KL+ L+L DCK L                N  G  KL N       +ESL  L
Sbjct: 847  SLMLRNSKLDYLDLGDCKKL----------------NFVG-KKLSND----RGLESLSIL 885

Query: 692  DISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGN 751
            ++SG              IN +  S  L          L+ LNL +C  +E  LP +I N
Sbjct: 886  NLSGCT-----------QINTLSMSFILDSARF-----LKYLNLRNCCNLE-TLPDNIQN 928

Query: 752  LCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLV 811
               L+ L+L                       + C  L SLP+LP ++ ++    C    
Sbjct: 929  CLMLRSLHL-----------------------DGCINLNSLPKLPASLEELSAINC---- 961

Query: 812  TLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPE 871
            T LD   + +            ++L N          +     +     ++++P +E+P 
Sbjct: 962  TYLDTNSIQR------------EMLENMLYRLRTGNHFGSPFISPEGFFNLLLPVAEVPC 1009

Query: 872  WFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGH 931
             F +    +SI +   S     K    + + CVF     S G N   S     +NC I +
Sbjct: 1010 GFDFFTTEASIIIPPIS-----KYEFYHIVLCVFL----SEGLNLTSS----GVNCTIYN 1056

Query: 932  -----GIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPW 986
                 G + I F    G   SDH+ L   S    +  R          +++H  +SFE  
Sbjct: 1057 HGDRSGGWNISFEHVSGAMISDHVMLFSSSGGIYHQTRA---------DNDHYRLSFEVE 1107

Query: 987  L-GQGLE-------VKMCGLHPVYMDEVEE----LDQTTNQPS------RFTVYNLNEFD 1028
            L G+  E       +K CG+  + +  +E     LD ++++         F     +EFD
Sbjct: 1108 LYGKDWEQLSSTKGIKGCGV--ILVSSLEHYCLRLDGSSSRSKVEIVELPFNAQVSDEFD 1165

Query: 1029 QH 1030
            QH
Sbjct: 1166 QH 1167


>gi|356561829|ref|XP_003549179.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1090

 Score =  367 bits (943), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 253/699 (36%), Positives = 370/699 (52%), Gaps = 48/699 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + S+  ++R L+D GS DV  +IGI GMGGLGKTT+A  VY+LI+  F+ S FL NVRE 
Sbjct: 234 LGSQVIEVRKLLDVGSHDVVHIIGIHGMGGLGKTTLALAVYNLIALHFDESCFLQNVREE 293

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  +LS+LL   D ++ +  +G  M+  RLQRKKVLL++DDV   +QL+++
Sbjct: 294 SNKHGLKHLQSIILSKLLGEKDINLTSWQEGASMIQHRLQRKKVLLILDDVDKRQQLKAI 353

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G  +WFG GSR+IIT+RD+H+LK H V+  Y+   LN   ALQL    AFK  +     
Sbjct: 354 VGRPDWFGPGSRVIITTRDKHILKYHEVERTYEVKVLNQSAALQLLKWNAFKREKNDPSY 413

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R++ YA GLPLALE++GS L G++V EW S +E  +  P  EIL+IL++SFD L 
Sbjct: 414 EDVLNRVVTYASGLPLALEIIGSNLFGKTVAEWESAMEHYKRIPSDEILEILKVSFDALG 473

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG----CGFHPVIGIRVLIEKCLITVHNNTLWMH 295
           E +K +FLDIAC  KG     V + L G    C  H    I VL++K L  V +  + MH
Sbjct: 474 EEQKNVFLDIACCLKGCKLTEVEHMLRGLYDNCMKH---HIDVLVDKSLTKVRHGIVEMH 530

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DL+Q++G++I +++SPEE GKR RLW  +++  VL  +TGT  +E I +D    + E  +
Sbjct: 531 DLIQDMGREIERQRSPEEPGKRKRLWSPKDIIQVLKHNTGTSKIEIIYVDFSISDKEETV 590

Query: 356 CASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
             +  AF KM NL++L I N +   G  Y    LR+L W  YP   LPSN      +   
Sbjct: 591 EWNENAFMKMENLKILIIRNGKFSKGPNYFPQGLRVLEWHRYPSNCLPSNFDPINLVICK 650

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           +  S +            LK++     + L ++PD +  PNL +L  + C  L  +  S+
Sbjct: 651 LPDSSMTSFEFHGSSKASLKILKFDWCKFLTQIPDVSDLPNLRELSFQWCESLVAVDDSI 710

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
              NKL  LN   C  L + P          L+L S          L TL++S       
Sbjct: 711 GFLNKLKKLNAYGCRKLTSFP---------PLHLTS----------LETLELSHCSSLEY 751

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
           FPEI+  ME++  L L G  I+ LP S + L GL  L++  C  ++ L  +++ +  L +
Sbjct: 752 FPEILGEMENIERLDLHGLPIKELPFSFQNLIGLQQLSMFGCGIVQ-LRCSLAMMPKLSA 810

Query: 596 LKLSGCSKLK---------KFPEIVRSMKDLSELFLDGTSIKEVP-------SSIELLTK 639
            K   C++ +         K   I+ S    +  +    S K          +  +    
Sbjct: 811 FKFVNCNRWQWVESEEAEEKVGSIISSE---ARFWTHSFSAKNCNLCDDFFLTGFKKFAH 867

Query: 640 LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
           +  LNLS   N   LP     L+ L +LN+S C  L+ +
Sbjct: 868 VGYLNLSR-NNFTILPEFFKELQFLGSLNVSHCKHLQEI 905



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 137/335 (40%), Gaps = 76/335 (22%)

Query: 588 SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLS 646
           S+   L+ LK   C  L + P+ V  + +L EL F    S+  V  SI  L KL+ LN  
Sbjct: 664 SSKASLKILKFDWCKFLTQIPD-VSDLPNLRELSFQWCESLVAVDDSIGFLNKLKKLNAY 722

Query: 647 DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH-STSWY 705
            C+ L   P   + L SL+TL LS C  LE  PE LG++E++E LD+ G  +     S+ 
Sbjct: 723 GCRKLTSFPP--LHLTSLETLELSHCSSLEYFPEILGEMENIERLDLHGLPIKELPFSFQ 780

Query: 706 SYIP----------INLMRKSVALKLPSLSGL----CS---------------------- 729
           + I           I  +R S+A+ +P LS      C+                      
Sbjct: 781 NLIGLQQLSMFGCGIVQLRCSLAM-MPKLSAFKFVNCNRWQWVESEEAEEKVGSIISSEA 839

Query: 730 ---LRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDC 786
                  +  +CNL +    +       +  L LS+N+F  LP     L  L ++ +  C
Sbjct: 840 RFWTHSFSAKNCNLCDDFFLTGFKKFAHVGYLNLSRNNFTILPEFFKELQFLGSLNVSHC 899

Query: 787 KRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSML 846
           K LQ +  +P N+R      CASL +                         +KS+   +L
Sbjct: 900 KHLQEIRGIPQNLRLFNARNCASLTS------------------------SSKSM---LL 932

Query: 847 REYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSS 881
            + L     T+     V PG+ IPEW  +Q+ G S
Sbjct: 933 NQELHEAGGTQ----FVFPGTRIPEWLDHQSSGHS 963


>gi|227438191|gb|ACP30585.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1301

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 262/699 (37%), Positives = 388/699 (55%), Gaps = 55/699 (7%)

Query: 11  LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV-----REISSKGGL 65
           L++  S +VRM+GI G  G+GKTTIAR ++  +S  F++S F+D V      ++     L
Sbjct: 201 LLEFESEEVRMVGIWGPSGIGKTTIARALFSRLSRRFQSSAFVDKVFISKNMDVYRGANL 260

Query: 66  ------VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
                 + LQR  L++LL   D  I    D I  +   L+ +K L+ IDD+ D   L +L
Sbjct: 261 GDYNMKLHLQRAFLAELLDNRDIKI----DHIGAVEKMLRHRKALIFIDDLDDQDVLDAL 316

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFGSGSRII+ ++D+H L+ HG+D +Y+    + D AL++F   AF+   P    
Sbjct: 317 AGRTQWFGSGSRIIVVTKDKHFLRAHGIDHIYEVCLPSKDLALEIFCRSAFRRNSPPDGF 376

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL- 238
           ++L++ ++  AG LPL L+VLGS L GR  ++W   L RL      +I   L+ S+DGL 
Sbjct: 377 MELASEVVFCAGNLPLGLDVLGSNLRGRDKEDWLDMLPRLRTSLDRKIERTLRASYDGLN 436

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
            + +K IF  +AC F G   D++   LE       IG++ L++K LI    NT+ MH LL
Sbjct: 437 NKKDKAIFRHVACLFSGRKVDHIKLLLEDRNLDVNIGLKNLVDKSLIHERFNTVEMHSLL 496

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVL-----DNYH-HENE 352
           QE+G++IV+ QS +E G+R  L   +++  VL ++TGT+ V GI L     D  H HEN 
Sbjct: 497 QEMGKEIVRAQS-DEPGEREFLMDSKDIWDVLEDNTGTKRVLGIELIMDETDELHVHEN- 554

Query: 353 VYLCASAKAFSKMTNLRLLKI--CN---LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
                   AF  M NLR L+I  CN   L LP   +YL   LRLL W GYP++ +PS  Q
Sbjct: 555 --------AFKGMCNLRFLEIFGCNVVRLHLPKNFDYLPPSLRLLSWHGYPMRCMPSKFQ 606

Query: 408 MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
            +  I++ M    + +LW+G+  L  LK + L+ S NL  +PD + A NLE+L L+ C+ 
Sbjct: 607 PENLIKLVMRAGNLEKLWEGVASLTCLKEIDLTLSVNLKEIPDLSKAMNLERLCLDFCSS 666

Query: 468 LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLP---TTISG 518
           L E+  S+    KL  L M  CT+L T+P  I + S E         L+  P   T IS 
Sbjct: 667 LLELPSSIRNLKKLRDLEMNFCTNLETIPTGIYLNSFEGFVLSGCSRLRRFPEILTNISE 726

Query: 519 LKCLSTLDV--SGDLKFREFPEIVEH--MEHLSELHL-EGTAIRGLPLSIELLSGLVLLN 573
                TLDV    +L+     E V+      ++ L L E  ++  LP S + L+ L  L+
Sbjct: 727 SPSYLTLDVLNMTNLRSENLWEGVQQPFTTLMTRLQLSEIPSLVELPSSFQNLNKLKWLD 786

Query: 574 LKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSS 633
           ++NC +LE LP  + NL+ L  L LSGCS+L+ FP I R+++ L    L  ++I+EVP  
Sbjct: 787 IRNCINLETLPTGI-NLQSLEYLVLSGCSRLRSFPNISRNIQYLK---LSFSAIEEVPWW 842

Query: 634 IELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC 672
           +E  + L+ LN+++C NL R+  +I+ LK LK    S C
Sbjct: 843 VEKFSALKDLNMANCTNLRRISLNILKLKHLKVALFSNC 881



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 111/453 (24%), Positives = 192/453 (42%), Gaps = 108/453 (23%)

Query: 495 LPGKILMKSLEKL-----NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSEL 549
           +P K   ++L KL     NL+ L   ++ L CL  +D++  +  +E P++ + M +L  L
Sbjct: 601 MPSKFQPENLIKLVMRAGNLEKLWEGVASLTCLKEIDLTLSVNLKEIPDLSKAM-NLERL 659

Query: 550 HLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
            L+  +++  LP SI  L  L  L +  C +LE +P  +  L       LSGCS+L++FP
Sbjct: 660 CLDFCSSLLELPSSIRNLKKLRDLEMNFCTNLETIPTGIY-LNSFEGFVLSGCSRLRRFP 718

Query: 609 EI--------------VRSMKDL-SELFLDGT-----------------SIKEVPSSIEL 636
           EI              V +M +L SE   +G                  S+ E+PSS + 
Sbjct: 719 EILTNISESPSYLTLDVLNMTNLRSENLWEGVQQPFTTLMTRLQLSEIPSLVELPSSFQN 778

Query: 637 LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
           L KL+ L++ +C NL  LP+ I  L+SL+ L LSGC +L + P     I+ L+   +S +
Sbjct: 779 LNKLKWLDIRNCINLETLPTGI-NLQSLEYLVLSGCSRLRSFPNISRNIQYLK---LSFS 834

Query: 697 AVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRK--LNLTDCNLMEGALPSDIGNLCS 754
           A+     W        + K  ALK  +++   +LR+  LN+     ++ AL S+ G L  
Sbjct: 835 AIEEVPWW--------VEKFSALKDLNMANCTNLRRISLNILKLKHLKVALFSNCGALTE 886

Query: 755 LKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLL 814
               +    S +++ T   H                SLP    +I  +   GC +L    
Sbjct: 887 AN--WDDSPSILAIATDTIH---------------SSLPDRYVSIAHLDFTGCFNL---- 925

Query: 815 DALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFM 874
                           D   L   +++                  + V++ G  +P +F 
Sbjct: 926 ----------------DHKDLFQQQTV-----------------FMRVILSGEVVPSYFT 952

Query: 875 YQNEGSSITVTRPSNLYNKKKLVGYAICCVFHV 907
           ++N G+S+T     ++   +  +    C +F +
Sbjct: 953 HRNNGTSLTNIPLPHISPSQPFLRLKACALFDI 985



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 131/305 (42%), Gaps = 51/305 (16%)

Query: 543 MEHLSELHLEGTAIRGL-PLSIELLSGLVLLNLKNCRSLEILPVTVS-------NLKCLR 594
           M+   ELH+   A +G+  L    + G  ++ L   ++ + LP ++         ++C+ 
Sbjct: 543 MDETDELHVHENAFKGMCNLRFLEIFGCNVVRLHLPKNFDYLPPSLRLLSWHGYPMRCMP 602

Query: 595 S-------LKLS-GCSKLKKFPEIVRSMKDLSELFLD-GTSIKEVPSSIELLTKLELLNL 645
           S       +KL      L+K  E V S+  L E+ L    ++KE+P  +     LE L L
Sbjct: 603 SKFQPENLIKLVMRAGNLEKLWEGVASLTCLKEIDLTLSVNLKEIPD-LSKAMNLERLCL 661

Query: 646 SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWY 705
             C +L+ LPSSI  LK L+ L ++ C  LE +P  +  + S E   +SG +       +
Sbjct: 662 DFCSSLLELPSSIRNLKKLRDLEMNFCTNLETIPTGI-YLNSFEGFVLSGCS---RLRRF 717

Query: 706 SYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGA--------------------- 744
             I  N+         PS   L  L   NL   NL EG                      
Sbjct: 718 PEILTNISES------PSYLTLDVLNMTNLRSENLWEGVQQPFTTLMTRLQLSEIPSLVE 771

Query: 745 LPSDIGNLCSLKELYLSKN-SFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR 803
           LPS   NL  LK L +    +  +LPT I +L  L  + L  C RL+S P +  NI+ ++
Sbjct: 772 LPSSFQNLNKLKWLDIRNCINLETLPTGI-NLQSLEYLVLSGCSRLRSFPNISRNIQYLK 830

Query: 804 VNGCA 808
           ++  A
Sbjct: 831 LSFSA 835


>gi|297791299|ref|XP_002863534.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309369|gb|EFH39793.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1360

 Score =  367 bits (941), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 252/694 (36%), Positives = 381/694 (54%), Gaps = 69/694 (9%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFL-DNVREISSKGGLVSLQRQLLSQLL 77
           +R +GI GM G+GKTT+A+ V+D +S EF+AS F+ D  + I  KG    L+ Q L +  
Sbjct: 167 IRCVGIWGMPGIGKTTLAKAVFDQMSGEFDASCFIEDYSKAIQEKGVYCLLEEQFLKENA 226

Query: 78  KLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSR 137
             A  ++      + +L ++L  K+VL+V+DDV     ++S  G  +WFG  S IIITSR
Sbjct: 227 GGAGGTVTK----LSLLRNKLNNKRVLVVLDDVRSPLVVESFLGGFDWFGPKSLIIITSR 282

Query: 138 DEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLAL 197
           D+ + +   VD++Y+  GLN  EALQLF+  A       Q   ++S ++++YA G PLAL
Sbjct: 283 DKQVFRLCRVDQIYEVLGLNEKEALQLFSFCASIDDMAEQSLHEVSMKVVKYASGHPLAL 342

Query: 198 EVLGSFLSGR-SVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGN 256
            + G  L G+ ++ E  +T   L+  PP+  +D ++  +D L + EK IFLDIACFF+G 
Sbjct: 343 SLYGRELKGKKTLPEMETTFLELKEHPPTMFVDAIKSCYDTLNDREKNIFLDIACFFEGE 402

Query: 257 DRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGK 316
           + DYV   LEGCGF P +GI VL+EKCL+T+  N + MH+L+Q +G+QI+ R++  +  +
Sbjct: 403 NVDYVMQLLEGCGFFPHVGIDVLVEKCLVTITENQVRMHNLIQNVGRQIINRET-RQTKR 461

Query: 317 RSRLWKEEEVCHVLTE---------------STGTELVEGIVLDNYHHENEVYLCASAKA 361
           R RLW+   + ++L +               + G E +EG+ LD  +   ++       A
Sbjct: 462 RDRLWEPWSIKYLLEDNGEKENGEHKTTLERAQGPEEIEGMFLDTSNFSFDI----KPAA 517

Query: 362 FSKMTNLRLLKICNLQ---------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
           F  M NLRLLKI +           L   L  L N LRLL W  YPL+FLP N      +
Sbjct: 518 FDNMLNLRLLKIYSSNPEVHHVKNFLKGSLNSLPNELRLLHWENYPLQFLPQNFDPIHLV 577

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
           EI M YS++ +LW G K+L+ LK + L HS+ L+ + D   A NLE + L+GCTRL    
Sbjct: 578 EINMPYSQLKKLWGGTKNLEMLKTIRLCHSQQLVDIDDVLKAQNLEVIDLQGCTRLQSFP 637

Query: 473 PS-LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKS-----LPTTISGLKCLSTLD 526
            +  LLH  L  +N+  CT + + P   +  ++E LNL+      LP +I        L+
Sbjct: 638 ATGQLLH--LRTVNLSGCTEIKSFPE--IPPNIETLNLQGTGIIELPLSIIKPNYTELLN 693

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPV 585
           +       E P +   + +L +  L+  T++  +  S + L  L+ L LK+C  L  LP 
Sbjct: 694 L-----LAEIPGL-SGVSNLEQSDLKPLTSLMKMSTSNQNLGKLICLELKDCARLRSLP- 746

Query: 586 TVSNLKCLRSLKLSGCSKLKK---FPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL 642
            ++NL+ L+ L LSGCS+L+    FP+      +L EL+L GT++++VP   +L   LEL
Sbjct: 747 NMNNLELLKVLDLSGCSELETIQGFPQ------NLKELYLAGTAVRQVP---QLPQSLEL 797

Query: 643 LNLSDCKNLVRLPSSIIALKSLKT-LNLSGCFKL 675
            N   C   V L S  +  + L     LS CF L
Sbjct: 798 FNAHGC---VSLKSIRVDFEKLPVHYTLSNCFDL 828



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 94/183 (51%), Gaps = 45/183 (24%)

Query: 640 LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP 699
           LE+++L  C  L   P++   L  L+T+NLSGC ++++ PE    IE+L   ++ GT + 
Sbjct: 622 LEVIDLQGCTRLQSFPATG-QLLHLRTVNLSGCTEIKSFPEIPPNIETL---NLQGTGII 677

Query: 700 HSTSWYSYIPINLMRKSVA------LKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLC 753
                   +P+++++ +         ++P LSG+ +L +              SD+  L 
Sbjct: 678 E-------LPLSIIKPNYTELLNLLAEIPGLSGVSNLEQ--------------SDLKPLT 716

Query: 754 SLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRV---NGCASL 810
           SL          + + TS  +L KL+ +EL+DC RL+SLP +  N+  ++V   +GC+ L
Sbjct: 717 SL----------MKMSTSNQNLGKLICLELKDCARLRSLPNM-NNLELLKVLDLSGCSEL 765

Query: 811 VTL 813
            T+
Sbjct: 766 ETI 768



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 2/84 (2%)

Query: 229  DILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGC-GFHPVIGIRVLIEKCLITV 287
            ++L++S+DGLQE++K +FL +A  F   D D V   +          G++VL ++ LI V
Sbjct: 1035 EVLRVSYDGLQEIDKALFLYLAGLFNDEDVDLVAPLIANSIDMDVSYGLKVLADRSLIRV 1094

Query: 288  HNN-TLWMHDLLQELGQQIVQRQS 310
             +N  + M++L QE+G++I+  +S
Sbjct: 1095 SSNGEIVMYNLQQEMGKEILHTES 1118


>gi|357449525|ref|XP_003595039.1| TMV resistance protein N [Medicago truncatula]
 gi|355484087|gb|AES65290.1| TMV resistance protein N [Medicago truncatula]
          Length = 1128

 Score =  366 bits (940), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 251/676 (37%), Positives = 379/676 (56%), Gaps = 57/676 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++ + E++  L ++GS+DVR +G+ GMGG+GKT +A+ +Y     +FE   FL+NVRE S
Sbjct: 202 IEEKYEEIELLTNNGSNDVRTLGLWGMGGIGKTALAKSLYGNYCSQFEYHCFLENVREES 261

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           ++ GL  ++++L S LLKL  ++ +  F+       RL+R K L+V+DDV  ++Q ++L 
Sbjct: 262 TRCGLNVVRKKLFSTLLKLGLDAPY--FE-TPTFKKRLERAKCLIVLDDVATLEQAENL- 317

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
             +   G GSR+I+T+RD  +        VY+   LN DE+LQLF   AF+     +   
Sbjct: 318 --KIGLGLGSRVIVTTRDRKICHQFEGFVVYEVKELNEDESLQLFCCNAFQEKHAKEGYE 375

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS   I Y  G PLAL+VLG+    +S +   S LE+++  P + I D+L++SF  L  
Sbjct: 376 ELSKSAIGYCRGNPLALKVLGANFRAKSKEACESELEKIKEIPYAGIHDVLKLSFYDLDR 435

Query: 241 LEKKIFLDIACFF--KGND------RDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNT 291
            ++ IFLDIACFF  K N       R+Y+ +    C F+P   I VL+ K L+T  + + 
Sbjct: 436 TQRDIFLDIACFFYPKINHFYCYGRREYIIDLFNACKFYPATSIEVLLHKSLMTFGYRDQ 495

Query: 292 LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
           + MHDL+ E+G++IV++++P++ GKRSRLW  E +  V   + GT+ VE I+ D      
Sbjct: 496 IEMHDLVVEMGREIVKQEAPKDPGKRSRLWDPELIYEVFKYNKGTDAVEVILFDT-SKIG 554

Query: 352 EVYLCASAKAFSKMTNLRLLKICN----LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
           +VYL  S+++F  M NLRLL I N    + L  GLE+LS++LR L W  +PL+ LPS   
Sbjct: 555 DVYL--SSRSFESMINLRLLHIANECNNVHLQEGLEWLSDKLRYLHWESFPLESLPSTFC 612

Query: 408 MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
               +++ M +S++ +LW  I+ LD L ++ L +SE+LI +PD + APNL+ L L  C  
Sbjct: 613 AQNLVQLSMTHSKLRKLWDRIQKLDNLTIIKLDNSEDLIEIPDLSRAPNLKILSLAYCVS 672

Query: 468 LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLP-------------- 513
           L+++HPS+    KL  L +K C  + +L   I  KSL++L+L                  
Sbjct: 673 LHQLHPSIFSAPKLRELCLKGCKKIESLVTDIHSKSLQRLDLTDCSSLVQFCVTSEEMKW 732

Query: 514 -----TTISGLKCL----STLDV--SGDLKFREFP----EIVEHMEHLSELHLEG-TAIR 557
                TTI     L    S LD    GD K   F          +E LS L+L G T I 
Sbjct: 733 LSLRGTTIHEFSSLMLRNSKLDYLDLGDCKKLNFVGKKLSNDRGLESLSILNLSGCTQIN 792

Query: 558 GLPLSIELLSGLVL--LNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMK 615
            L +S  L S   L  LNL+NC +LE LP  + N   LRSL L GC  L   P++  S++
Sbjct: 793 TLSMSFILDSARFLKYLNLRNCCNLETLPDNIQNCLMLRSLHLDGCINLNSLPKLPASLE 852

Query: 616 DLSEL---FLDGTSIK 628
           +LS +   +LD  SI+
Sbjct: 853 ELSAINCTYLDTNSIQ 868



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 188/482 (39%), Gaps = 128/482 (26%)

Query: 572  LNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP 631
            L LK C+ +E L VT  + K L+ L L+ CS L +F      MK LS   L GT+I E  
Sbjct: 689  LCLKGCKKIESL-VTDIHSKSLQRLDLTDCSSLVQFCVTSEEMKWLS---LRGTTIHEFS 744

Query: 632  SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
            S +   +KL+ L+L DCK                 LN  G  KL N       +ESL  L
Sbjct: 745  SLMLRNSKLDYLDLGDCKK----------------LNFVG-KKLSNDR----GLESLSIL 783

Query: 692  DISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGN 751
            ++SG              IN +  S  L          L+ LNL +C             
Sbjct: 784  NLSGCT-----------QINTLSMSFILDSARF-----LKYLNLRNC------------- 814

Query: 752  LCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLV 811
             C+L+          +LP +I +   L ++ L+ C  L SLP+LP ++ ++    C    
Sbjct: 815  -CNLE----------TLPDNIQNCLMLRSLHLDGCINLNSLPKLPASLEELSAINC---- 859

Query: 812  TLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPE 871
            T LD   + +            ++L N          +     +     ++++P +E+P 
Sbjct: 860  TYLDTNSIQR------------EMLENMLYRLRTGNHFGSPFISPEGFFNLLLPVAEVPC 907

Query: 872  WFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGH 931
             F +    +SI +   S     K    + + CVF     S G N   S     +NC I +
Sbjct: 908  GFDFFTTEASIIIPPIS-----KYEFYHIVLCVFL----SEGLNLTSS----GVNCTIYN 954

Query: 932  -----GIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPW 986
                 G + I F    G   SDH+ L   S    +  R          +++H  +SFE  
Sbjct: 955  HGDRSGGWNISFEHVSGAMISDHVMLFSSSGGIYHQTRA---------DNDHYRLSFEVE 1005

Query: 987  L-GQGLE-------VKMCGLHPVYMDEVEE----LDQTTNQPS------RFTVYNLNEFD 1028
            L G+  E       +K CG+  + +  +E     LD ++++         F     +EFD
Sbjct: 1006 LYGKDWEQLSSTKGIKGCGV--ILVSSLEHYCLRLDGSSSRSKVEIVELPFNAQVSDEFD 1063

Query: 1029 QH 1030
            QH
Sbjct: 1064 QH 1065


>gi|357503303|ref|XP_003621940.1| TMV resistance protein N [Medicago truncatula]
 gi|355496955|gb|AES78158.1| TMV resistance protein N [Medicago truncatula]
          Length = 1093

 Score =  366 bits (940), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 232/591 (39%), Positives = 352/591 (59%), Gaps = 29/591 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEA-SGFLDNVREI 59
           ++ R + +  ++   S    MIG+ GMGG GKTT+A+ +Y+ I  EF+  + F++++RE+
Sbjct: 199 LEPRVQSITKILYDESRKACMIGLWGMGGSGKTTLAKAIYNRIHREFQGKTSFIESIREV 258

Query: 60  S--SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
              ++ G++ LQ QLLS LLK  D  I ++  GI+ +  RLQ +KVL+V+DDV   +QL+
Sbjct: 259 CDYNRKGIIHLQEQLLSDLLKTKDK-IHSIAVGINKIEKRLQGQKVLIVLDDVTKSEQLK 317

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
           +L GN + FGSGS +IIT+RD   L +     V+    ++ +E+L+LF+  AF+   P +
Sbjct: 318 ALGGNPKLFGSGSVLIITTRDRSHLDSLSA-RVFTMIEMDKNESLELFSWHAFRQSCPRK 376

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
           +  +LS  ++ Y  GLPLALEVLGS+LS R+  EWRS L +L   P +E+L IL+IS+DG
Sbjct: 377 DFGKLSRNVVSYCKGLPLALEVLGSYLSKRTEQEWRSALSKLTKIPNNEVLQILRISYDG 436

Query: 238 LQEL-EKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMH 295
           L++  EK IFLDI CFF G +R  VT  L GCG H  IG+ VLIE+ LI V  NN   MH
Sbjct: 437 LEDYTEKDIFLDICCFFIGKNRVDVTEILNGCGLHADIGVSVLIERSLIKVDKNNKFQMH 496

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DLL+++G+ IV   S +E  K SRLW  E+V  VL++ TGT+ VEG++L     +    +
Sbjct: 497 DLLRDMGRAIVSESSAKEPEKHSRLWCHEDVLDVLSKKTGTKTVEGLIL---KWQRTGRI 553

Query: 356 CASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
           C    AF +M  LRLLK+  + L      +S +LR + W+     F+P++      +   
Sbjct: 554 CFGTNAFQEMEKLRLLKLDGVDLIGDYGLISKQLRWVDWQRSTFTFIPNDFDQANLVVFE 613

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           + YS + ++W+  K L+KLKV+ LSHS+ L   PDF+  PNLEKL+++ C  L  +HPS+
Sbjct: 614 LKYSNVKQVWQDTKLLEKLKVLKLSHSKYLKSSPDFSKLPNLEKLVMKDCQSLSNVHPSI 673

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
                L+++N+KDC                 + L++LP  I  LK + TL ++G     +
Sbjct: 674 GDLKNLLLINLKDC-----------------IILENLPREIYQLKSVKTLILTGCSTIDK 716

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL--EILP 584
             E +  ME L+ L   GT+I+ +P SI  L  +V +++     L  E+ P
Sbjct: 717 LEEDIVQMESLTSLITTGTSIKEVPYSILRLRSIVYISICGYEGLSHEVFP 767



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 37/59 (62%)

Query: 576 NCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSI 634
           +C  LE LP  +  LK +++L L+GCS + K  E +  M+ L+ L   GTSIKEVP SI
Sbjct: 686 DCIILENLPREIYQLKSVKTLILTGCSTIDKLEEDIVQMESLTSLITTGTSIKEVPYSI 744



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 138/340 (40%), Gaps = 50/340 (14%)

Query: 604 LKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
           LK  P+  + + +L +L + D  S+  V  SI  L  L L+NL DC  L  LP  I  LK
Sbjct: 643 LKSSPDFSK-LPNLEKLVMKDCQSLSNVHPSIGDLKNLLLINLKDCIILENLPREIYQLK 701

Query: 663 SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
           S+KTL L+GC  ++ + E + Q+ESL  L  +GT++         +P +++R    L+  
Sbjct: 702 SVKTLILTGCSTIDKLEEDIVQMESLTSLITTGTSIKE-------VPYSILR----LRSI 750

Query: 723 SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNI 781
               +C    L+           PS I    S     L +   F  +P S+      L++
Sbjct: 751 VYISICGYEGLS-------HEVFPSLIRFWMSPTINSLPRIPPFGGMPLSLVS----LDL 799

Query: 782 ELEDCKRLQSLPQLPPN------IRQVRVNGCASLVTLLDALK-------------LCKS 822
           E  +     +L  L P       +R  RV  C S++ L   L+             L  S
Sbjct: 800 ENNNNNNNNNLSCLVPKLNSFSELRSFRVQ-CQSMIQLTRELRRFLDDLYDANFTELETS 858

Query: 823 DSTMIACLDSLKLL---GNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEG 879
            ++ I+ L    LL   G+     + L + +     T   +   +PG   P W  Y+  G
Sbjct: 859 HTSQISVLSLRSLLIGMGSYHTVINTLGKSISQELRTNDSVDYFLPGDNYPSWLTYRCVG 918

Query: 880 SSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGS 919
            S+    P+       L G  +C V+     + G  C  S
Sbjct: 919 PSVYFEVPNG--GVCGLNGITLCVVYSSTLENIGTECLTS 956


>gi|124361170|gb|ABN09142.1| TIR [Medicago truncatula]
          Length = 1054

 Score =  366 bits (939), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 232/591 (39%), Positives = 352/591 (59%), Gaps = 29/591 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEA-SGFLDNVREI 59
           ++ R + +  ++   S    MIG+ GMGG GKTT+A+ +Y+ I  EF+  + F++++RE+
Sbjct: 199 LEPRVQSITKILYDESRKACMIGLWGMGGSGKTTLAKAIYNRIHREFQGKTSFIESIREV 258

Query: 60  S--SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
              ++ G++ LQ QLLS LLK  D  I ++  GI+ +  RLQ +KVL+V+DDV   +QL+
Sbjct: 259 CDYNRKGIIHLQEQLLSDLLKTKDK-IHSIAVGINKIEKRLQGQKVLIVLDDVTKSEQLK 317

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
           +L GN + FGSGS +IIT+RD   L +     V+    ++ +E+L+LF+  AF+   P +
Sbjct: 318 ALGGNPKLFGSGSVLIITTRDRSHLDSLSA-RVFTMIEMDKNESLELFSWHAFRQSCPRK 376

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
           +  +LS  ++ Y  GLPLALEVLGS+LS R+  EWRS L +L   P +E+L IL+IS+DG
Sbjct: 377 DFGKLSRNVVSYCKGLPLALEVLGSYLSKRTEQEWRSALSKLTKIPNNEVLQILRISYDG 436

Query: 238 LQEL-EKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMH 295
           L++  EK IFLDI CFF G +R  VT  L GCG H  IG+ VLIE+ LI V  NN   MH
Sbjct: 437 LEDYTEKDIFLDICCFFIGKNRVDVTEILNGCGLHADIGVSVLIERSLIKVDKNNKFQMH 496

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DLL+++G+ IV   S +E  K SRLW  E+V  VL++ TGT+ VEG++L     +    +
Sbjct: 497 DLLRDMGRAIVSESSAKEPEKHSRLWCHEDVLDVLSKKTGTKTVEGLIL---KWQRTGRI 553

Query: 356 CASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
           C    AF +M  LRLLK+  + L      +S +LR + W+     F+P++      +   
Sbjct: 554 CFGTNAFQEMEKLRLLKLDGVDLIGDYGLISKQLRWVDWQRSTFTFIPNDFDQANLVVFE 613

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           + YS + ++W+  K L+KLKV+ LSHS+ L   PDF+  PNLEKL+++ C  L  +HPS+
Sbjct: 614 LKYSNVKQVWQDTKLLEKLKVLKLSHSKYLKSSPDFSKLPNLEKLVMKDCQSLSNVHPSI 673

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
                L+++N+KDC                 + L++LP  I  LK + TL ++G     +
Sbjct: 674 GDLKNLLLINLKDC-----------------IILENLPREIYQLKSVKTLILTGCSTIDK 716

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL--EILP 584
             E +  ME L+ L   GT+I+ +P SI  L  +V +++     L  E+ P
Sbjct: 717 LEEDIVQMESLTSLITTGTSIKEVPYSILRLRSIVYISICGYEGLSHEVFP 767



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 37/59 (62%)

Query: 576 NCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSI 634
           +C  LE LP  +  LK +++L L+GCS + K  E +  M+ L+ L   GTSIKEVP SI
Sbjct: 686 DCIILENLPREIYQLKSVKTLILTGCSTIDKLEEDIVQMESLTSLITTGTSIKEVPYSI 744



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 138/340 (40%), Gaps = 50/340 (14%)

Query: 604 LKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
           LK  P+  + + +L +L + D  S+  V  SI  L  L L+NL DC  L  LP  I  LK
Sbjct: 643 LKSSPDFSK-LPNLEKLVMKDCQSLSNVHPSIGDLKNLLLINLKDCIILENLPREIYQLK 701

Query: 663 SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
           S+KTL L+GC  ++ + E + Q+ESL  L  +GT++         +P +++R    L+  
Sbjct: 702 SVKTLILTGCSTIDKLEEDIVQMESLTSLITTGTSIKE-------VPYSILR----LRSI 750

Query: 723 SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNI 781
               +C    L+           PS I    S     L +   F  +P S+      L++
Sbjct: 751 VYISICGYEGLS-------HEVFPSLIRFWMSPTINSLPRIPPFGGMPLSLVS----LDL 799

Query: 782 ELEDCKRLQSLPQLPPN------IRQVRVNGCASLVTLLDALK-------------LCKS 822
           E  +     +L  L P       +R  RV  C S++ L   L+             L  S
Sbjct: 800 ENNNNNNNNNLSCLVPKLNSFSELRSFRVQ-CQSMIQLTRELRRFLDDLYDANFTELETS 858

Query: 823 DSTMIACLDSLKLL---GNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEG 879
            ++ I+ L    LL   G+     + L + +     T   +   +PG   P W  Y+  G
Sbjct: 859 HTSQISVLSLRSLLIGMGSYHTVINTLGKSISQELRTNDSVDYFLPGDNYPSWLTYRCVG 918

Query: 880 SSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGS 919
            S+    P+       L G  +C V+     + G  C  S
Sbjct: 919 PSVYFEVPNG--GVCGLNGITLCVVYSSTLENIGTECLTS 956


>gi|357487985|ref|XP_003614280.1| TMV resistance protein N [Medicago truncatula]
 gi|355515615|gb|AES97238.1| TMV resistance protein N [Medicago truncatula]
          Length = 1024

 Score =  365 bits (938), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 218/579 (37%), Positives = 338/579 (58%), Gaps = 26/579 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEA-SGFLDNVREI 59
           ++SR +++  ++D  S  V +IGI GMGG GKTT A+ +Y+ I   F+  + F++++RE+
Sbjct: 189 LESRVQQITKIIDDQSWKVCIIGIWGMGGSGKTTTAKALYNQIHRRFQGRTSFVESIREV 248

Query: 60  --SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
             ++  G ++LQ+QLL  L ++    I  V  G + + +RLQ +KVL+V+DDV   +QL+
Sbjct: 249 CDNNSRGAITLQKQLLLDLFEIK-QKIHGVALGKNKIMTRLQGQKVLVVLDDVTKSEQLK 307

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
           +L  N +  GSGS +IIT+RD  LLK+  VD VY    ++  ++L+LF+  AF+   P  
Sbjct: 308 ALCENPKLLGSGSVLIITTRDLRLLKSFKVDHVYTMTEMDKHQSLELFSCHAFQQPNPRD 367

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
           +  +LS  ++ Y  GLPLALEVLG +LS R+  EWR  L +LE  P +++  IL+IS+DG
Sbjct: 368 KFSELSRNVVAYCKGLPLALEVLGRYLSERTEQEWRCALSKLEKIPNNDVQQILRISYDG 427

Query: 238 LQEL-EKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMH 295
           L++  +K IFLDI CFF G +R  VT  L GCG H   GI +LIE+ L+ V  NNTL MH
Sbjct: 428 LEDYTQKDIFLDICCFFIGKNRADVTEILNGCGLHAYSGISILIERSLVKVEKNNTLGMH 487

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DLL+++G+ I    S +E  K SRLW  ++V  VL +  GTE+VEG++ +        + 
Sbjct: 488 DLLRDMGRSIAGESSIKEPAKHSRLWFHDDVNDVLLKKNGTEIVEGLIFELPRTHRTRF- 546

Query: 356 CASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
                AF +M  LRLLK+  + L      +S +LR + W+    K +P +  +   +   
Sbjct: 547 --GTNAFQEMKKLRLLKLDGVDLIGDYGLISKQLRWVDWQRPTFKCIPDDSDLGNLVVFE 604

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           + +S IG++W+  K L KLK++ +SH++ L   PDF+  PNLEKLI++ C  L E+H S+
Sbjct: 605 LKHSNIGQVWQEPKLLGKLKILNVSHNKYLKITPDFSKLPNLEKLIMKDCPSLIEVHQSI 664

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
                ++++N++DC SL  LP +I                   L  + TL +SG  K  +
Sbjct: 665 GDLKNIVLINLRDCKSLANLPREIYK-----------------LISVKTLILSGCSKIEK 707

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL 574
             E +  ME L+ L    T I+ +P SI     +  ++L
Sbjct: 708 LEEDIMQMESLTALIAANTGIKQVPYSIARSKSIAYISL 746



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 147/325 (45%), Gaps = 32/325 (9%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNL 651
           L+ L +S    LK  P+  + + +L +L + D  S+ EV  SI  L  + L+NL DCK+L
Sbjct: 623 LKILNVSHNKYLKITPDFSK-LPNLEKLIMKDCPSLIEVHQSIGDLKNIVLINLRDCKSL 681

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPIN 711
             LP  I  L S+KTL LSGC K+E + E + Q+ESL  L  + T +         +P +
Sbjct: 682 ANLPREIYKLISVKTLILSGCSKIEKLEEDIMQMESLTALIAANTGIKQ-------VPYS 734

Query: 712 LMR-KSVA-LKLPSLSGLC-----SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNS 764
           + R KS+A + L    GL      SL    ++     +  +    GN  SL  L +  N+
Sbjct: 735 IARSKSIAYISLCGYEGLSRDVFPSLIWSWMSPTRNSQSHIFPFAGNSLSLVSLDVESNN 794

Query: 765 FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDS 824
                  +T LSKL  +  +      S  QL   +R+   +      T L+      S +
Sbjct: 795 MEYQSPMLTVLSKLRCVWFQ----CHSENQLTQELRRYIDDLYDVNFTELET----TSHA 846

Query: 825 TMIACLDSLKLL----GNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGS 880
             I  L SLKLL    G+  +    L + L     T    S  +PG   P W  Y+ EGS
Sbjct: 847 HQIENL-SLKLLVIGMGSSQIVTDTLGKSLAQGLATNSSDS-FLPGDNYPSWLAYKCEGS 904

Query: 881 SITVTRPSNLYNKKKLVGYAICCVF 905
           S+ +  P +  +   + G A+C V+
Sbjct: 905 SVLLQVPED--SGSCMKGIALCVVY 927


>gi|359493572|ref|XP_002270741.2| PREDICTED: uncharacterized protein LOC100261885 [Vitis vinifera]
          Length = 2338

 Score =  365 bits (938), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 228/557 (40%), Positives = 339/557 (60%), Gaps = 26/557 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MDSR E+L  L+    +DVRM+G+ G+GG+GKTTI   +Y+ IS++FE+   L +VR+ S
Sbjct: 193 MDSRLERLISLLKIELNDVRMVGVYGLGGIGKTTIINALYNRISNQFESVSLLTDVRKES 252

Query: 61  SKG-GLVSLQRQLLSQLLKLADNSIW-NVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
           ++  GL+ LQ+QLL+  L+     +  +V +GI  +  +L  KKVL+ +DDV ++ QL+ 
Sbjct: 253 TENSGLLKLQQQLLNDTLRTTRKIVLRDVHEGIKEIRDKLSSKKVLVFLDDVDELTQLEH 312

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G  +WFG GSRIIIT+R + LL  H V+++Y+   L + EALQLF   AFK + P + 
Sbjct: 313 LIGKHDWFGPGSRIIITTRKKDLLTRHEVNDMYEVEKLYFHEALQLFCRYAFKQHHPKEG 372

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
              LS ++++YA GLPLAL+VLGS L G+ + +W+S L++LE  P  EI+ +L+ISFDGL
Sbjct: 373 YGDLSHQVVQYADGLPLALKVLGSLLFGKRLPDWKSELQKLEKVPNMEIVKVLKISFDGL 432

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDL 297
              ++ IFLDIACFF+G+D   V+  L+   F+   GI  L+++C IT+  +N + MHDL
Sbjct: 433 DYTQRMIFLDIACFFRGDDVKRVSRILDASEFNAESGINALVDRCFITISKDNRIDMHDL 492

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           L ++G+ IV ++ P E G+RSRLW+  ++  VL  +TGTE +EGI L   H +    +  
Sbjct: 493 LAQMGKGIVDQECPNEPGERSRLWRHIDIYRVLKRNTGTEKIEGIYL---HVDKSEQIQF 549

Query: 358 SAKAFSKMTNLRLLKIC--NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
           ++KAF +M  LRLL I   ++QL     +  + L  L W GY L+ LPSN   +  + + 
Sbjct: 550 TSKAFERMHRLRLLSISHNHVQLSKDFVFPYD-LTYLRWNGYSLESLPSNFHANNLVSLI 608

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           +  S I  LWKG   L  L+ + LS S+ LI +P+F+  PNLE+LIL GC         +
Sbjct: 609 LGNSNIKLLWKGNMCLRNLRRINLSDSQQLIELPNFSNVPNLEELILSGCI--------I 660

Query: 476 LLHNKLIILN--MKDCTSLITLPGKI-LMKSLEKL------NLKSLPTTISGLKCLSTLD 526
           LL + +  L     D T++  LP  I L++ L  L      NL+ LP +I  L+ L  L 
Sbjct: 661 LLKSNIAKLEELCLDETAIKELPSSIELLEGLRYLNLDNCKNLEGLPNSICNLRFLVVLS 720

Query: 527 VSGDLKFREFPEIVEHM 543
           + G  K    PE +E M
Sbjct: 721 LEGCSKLDRLPEDLERM 737



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 150/498 (30%), Positives = 239/498 (47%), Gaps = 64/498 (12%)

Query: 538  EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
            E   ++EH  +L L+G  I  LP  IE  S    L L+ C++LE LP ++   K L+SL 
Sbjct: 1078 ECQRNVEH-RKLCLKGQPISLLP--IEHASEFDTLCLRECKNLESLPTSIWEFKSLKSLF 1134

Query: 598  LSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSS 657
             S CS+L+ FPEI+ +M++L EL L+ T+IKE+PSSIE L +LE+LNL  CK LV LP S
Sbjct: 1135 CSHCSQLQYFPEILENMENLRELHLNETAIKELPSSIEHLNRLEVLNLEGCKKLVTLPES 1194

Query: 658  IIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSV 717
            I  L  L+ L++S C KL  +P+ LG+++SL+ L   G                    S 
Sbjct: 1195 ICNLCFLEVLDVSYCSKLHKLPQNLGRLQSLKHLCACGL------------------NST 1236

Query: 718  ALKLPSLSGLCSLRK-------------------------LNLTDCNLMEGALPSDIGNL 752
              +L SL GLCSL+                          L+L+ C + EG +P++I +L
Sbjct: 1237 CCQLVSLLGLCSLKNLILPGSKLMQGVVLSDICCLYSLEVLDLSFCRIDEGGIPTEICHL 1296

Query: 753  CSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVT 812
             SL+ L+LS N F S+P+ +  LS L  + L  C+ L+ +P LP ++R + V+ C  L T
Sbjct: 1297 SSLQHLHLSGNLFRSIPSGVNQLSMLRILNLGHCQELRQIPALPSSLRVLDVHECPWLET 1356

Query: 813  LLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGS-EIPE 871
                L      S++  C  SL       +     R Y       R  +++++ GS  IP+
Sbjct: 1357 SSGLLW-----SSLFNCFKSL-------IQDFECRIYPRDSLFAR--VNLIISGSCGIPK 1402

Query: 872  WFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGH 931
            W  +  +G+ +    P N Y    L+G+ +  ++  L N              L C +  
Sbjct: 1403 WISHHKKGAKVVAKLPENWYKNNDLLGFVLYSLYDPLDNESEETLEND--AAYLKCSLTL 1460

Query: 932  GIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWL-GQG 990
              +   F D+     S   + +       Y  ++ +E      +   +  SF  +  G+ 
Sbjct: 1461 RAHESQFVDELQFYPSFRCYDVVPKMWMIYYAKVVIEKKYHSNKWRQLTASFCGFSHGKA 1520

Query: 991  LEVKMCGLHPVYMDEVEE 1008
            ++V+ CG+H +Y  + E+
Sbjct: 1521 MKVEECGIHLIYAHDHEK 1538



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 133/471 (28%), Positives = 213/471 (45%), Gaps = 84/471 (17%)

Query: 542  HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
            ++EH  +L L+G  I  LP  IE  S    L L+ C++LE LP ++   K L+SL  S C
Sbjct: 1872 NVEH-RKLCLKGQTISLLP--IEHASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSHC 1928

Query: 602  SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
            S+L+ FPEI+ +M++L EL L+ T+IKE+PSSIE L +LE+LNL  C+NL+   +  IA 
Sbjct: 1929 SQLQYFPEILENMENLRELHLNETAIKELPSSIEHLNRLEVLNLDRCENLLLFKTPQIAT 1988

Query: 662  KSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKL 721
            K                P    ++E          A P     ++ +PI           
Sbjct: 1989 K----------------PREAAKLE----------ASPCLWLKFNMLPIAFF-------- 2014

Query: 722  PSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNI 781
                              + EG +P++I +L SL++L L+ N F S+P+ +  LS L  +
Sbjct: 2015 ----------------VGIDEGGIPTEICHLSSLRQLLLTGNLFRSIPSGVNQLSMLRLL 2058

Query: 782  ELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSL 841
            +L  C+ L+ +P LP ++R + V+ C  L T    L      S++  C  SL       +
Sbjct: 2059 DLGHCQELRQIPALPSSLRVLDVHECTRLETSSGLLW-----SSLFNCFKSL-------I 2106

Query: 842  AFSMLREYLEAVSNTRQHLSVVVPGS-EIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYA 900
                 R Y       R HL  ++ GS  IP+W  +  +G+ +    P N Y    L+G+ 
Sbjct: 2107 QDFECRIYPRENRFARVHL--IISGSCGIPKWISHHKKGAKVVAELPENWYKNNDLLGFV 2164

Query: 901  ICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKF-----GQAGSDHLWLLYL 955
            +  ++  L N        +Y T  L C +    +   F D+      G++    +     
Sbjct: 2165 LYSLYDPLDN-ESEETLENYAT-SLKCGLTLRAHESQFVDELRCRICGESSQMCV----- 2217

Query: 956  SRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDEV 1006
               TCY  ++ + +     E   +  SF  + G  +EVK  G H +Y  +V
Sbjct: 2218 ---TCYP-KVAINNQYWSNEWRRLKASFRSFDGTPVEVKEWGFHLIYTGDV 2264



 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 94/255 (36%), Positives = 136/255 (53%), Gaps = 31/255 (12%)

Query: 508  NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
            NL+SLPT+I   K L +L  S   + + FPEI+E+ME+L ELHL  TAI+ LP SIE L+
Sbjct: 1116 NLESLPTSIWEFKSLKSLFCSHCSQLQYFPEILENMENLRELHLNETAIKELPSSIEHLN 1175

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPE---IVRSMKDLSELFLDG 624
             L +LNL+ C+ L  LP ++ NL  L  L +S CSKL K P+    ++S+K L    L+ 
Sbjct: 1176 RLEVLNLEGCKKLVTLPESICNLCFLEVLDVSYCSKLHKLPQNLGRLQSLKHLCACGLNS 1235

Query: 625  TSIKEVPSSIELLTKLELLNLSDCKNLVRLP----------SSIIALKSLKTLNLSGCFK 674
            T  + V           LL L   KNL+ LP          S I  L SL+ L+LS C  
Sbjct: 1236 TCCQLV----------SLLGLCSLKNLI-LPGSKLMQGVVLSDICCLYSLEVLDLSFCRI 1284

Query: 675  LE-NVPETLGQIESLEELDISGT---AVPHSTSWYSYIPI-NLMRKSVALKLPSLSGLCS 729
             E  +P  +  + SL+ L +SG    ++P   +  S + I NL       ++P+L    S
Sbjct: 1285 DEGGIPTEICHLSSLQHLHLSGNLFRSIPSGVNQLSMLRILNLGHCQELRQIPALPS--S 1342

Query: 730  LRKLNLTDCNLMEGA 744
            LR L++ +C  +E +
Sbjct: 1343 LRVLDVHECPWLETS 1357



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/104 (48%), Positives = 72/104 (69%), Gaps = 1/104 (0%)

Query: 548  ELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKF 607
            +L L+G+AI  LP +IE       L L+ C++LE LP ++  LK L +L  SGCS+L+ F
Sbjct: 1561 KLCLKGSAINELP-TIECPLEFDSLCLRECKNLERLPSSICELKSLTTLNCSGCSRLRSF 1619

Query: 608  PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
            PEI+  +++L  L LDGT+IKE+P+SI+ L  L+ LNL+DC NL
Sbjct: 1620 PEILEDVENLRNLHLDGTAIKELPASIQYLRGLQCLNLADCTNL 1663



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 97/186 (52%), Gaps = 20/186 (10%)

Query: 508  NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
            NL+SLPT+I   K L +L  S   + + FPEI+E+ME+L ELHL  TAI+ LP SIE L+
Sbjct: 1906 NLESLPTSIWEFKSLKSLFCSHCSQLQYFPEILENMENLRELHLNETAIKELPSSIEHLN 1965

Query: 568  GLVLLNLKNCRSLEIL--PVTVSNLKCLRSLKLSGCSKLK---------------KFPEI 610
             L +LNL  C +L +   P   +  +    L+ S C  LK                 P  
Sbjct: 1966 RLEVLNLDRCENLLLFKTPQIATKPREAAKLEASPCLWLKFNMLPIAFFVGIDEGGIPTE 2025

Query: 611  VRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLS 670
            +  +  L +L L G   + +PS +  L+ L LL+L  C+ L ++P+      SL+ L++ 
Sbjct: 2026 ICHLSSLRQLLLTGNLFRSIPSGVNQLSMLRLLDLGHCQELRQIPA---LPSSLRVLDVH 2082

Query: 671  GCFKLE 676
             C +LE
Sbjct: 2083 ECTRLE 2088



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 64/148 (43%), Positives = 83/148 (56%), Gaps = 6/148 (4%)

Query: 542 HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
           H  +L  L L  + I+ L      L  L  +NL + + L  LP   SN+  L  L LSGC
Sbjct: 600 HANNLVSLILGNSNIKLLWKGNMCLRNLRRINLSDSQQLIELP-NFSNVPNLEELILSGC 658

Query: 602 SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
             L K      ++  L EL LD T+IKE+PSSIELL  L  LNL +CKNL  LP+SI  L
Sbjct: 659 IILLK-----SNIAKLEELCLDETAIKELPSSIELLEGLRYLNLDNCKNLEGLPNSICNL 713

Query: 662 KSLKTLNLSGCFKLENVPETLGQIESLE 689
           + L  L+L GC KL+ +PE L ++  LE
Sbjct: 714 RFLVVLSLEGCSKLDRLPEDLERMPCLE 741



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 57/82 (69%)

Query: 508  NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
            NL+ LP++I  LK L+TL+ SG  + R FPEI+E +E+L  LHL+GTAI+ LP SI+ L 
Sbjct: 1591 NLERLPSSICELKSLTTLNCSGCSRLRSFPEILEDVENLRNLHLDGTAIKELPASIQYLR 1650

Query: 568  GLVLLNLKNCRSLEILPVTVSN 589
            GL  LNL +C +L++     SN
Sbjct: 1651 GLQCLNLADCTNLDLKHEKSSN 1672



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 59/96 (61%), Gaps = 5/96 (5%)

Query: 607  FPEIVR----SMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
             P I R     ++   +L L G++I E+P+ IE   + + L L +CKNL RLPSSI  LK
Sbjct: 1545 IPTICRKCQADVQSRRKLCLKGSAINELPT-IECPLEFDSLCLRECKNLERLPSSICELK 1603

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
            SL TLN SGC +L + PE L  +E+L  L + GTA+
Sbjct: 1604 SLTTLNCSGCSRLRSFPEILEDVENLRNLHLDGTAI 1639



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 15/208 (7%)

Query: 399  LKFLPSNLQ-MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPN 456
            L++ P  L+ M+   E+++  + I EL   I+HL++L+V+ L   + L+ +P+       
Sbjct: 1141 LQYFPEILENMENLRELHLNETAIKELPSSIEHLNRLEVLNLEGCKKLVTLPESICNLCF 1200

Query: 457  LEKLILEGCTRLYEIHPSL-----LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKS 511
            LE L +  C++L+++  +L     L H     LN   C  L++L G   +K+L     K 
Sbjct: 1201 LEVLDVSYCSKLHKLPQNLGRLQSLKHLCACGLN-STCCQLVSLLGLCSLKNLILPGSKL 1259

Query: 512  LPTTI-SGLKCLSTLDVSGDLKFRE-----FPEIVEHMEHLSELHLEGTAIRGLPLSIEL 565
            +   + S + CL +L+V  DL F        P  + H+  L  LHL G   R +P  +  
Sbjct: 1260 MQGVVLSDICCLYSLEVL-DLSFCRIDEGGIPTEICHLSSLQHLHLSGNLFRSIPSGVNQ 1318

Query: 566  LSGLVLLNLKNCRSLEILPVTVSNLKCL 593
            LS L +LNL +C+ L  +P   S+L+ L
Sbjct: 1319 LSMLRILNLGHCQELRQIPALPSSLRVL 1346



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 16/149 (10%)

Query: 768  LPTSITHLSKLLNIELEDCKRLQSLPQL---PPNIRQVRVNGCASLVTLLDALKLCKSDS 824
            LP+SI  L  L  +    C RL+S P++     N+R + ++G         A+K   +  
Sbjct: 1595 LPSSICELKSLTTLNCSGCSRLRSFPEILEDVENLRNLHLDG--------TAIKELPASI 1646

Query: 825  TMIACLDSLKLLGNKSLAFSMLRE----YLEAVSNTRQHLSVVVPGSE-IPEWFMYQNEG 879
              +  L  L L    +L     +     +L         + +VVPGS  IP+W   Q EG
Sbjct: 1647 QYLRGLQCLNLADCTNLDLKHEKSSNGVFLPNSDYIGDGICIVVPGSSGIPKWIRNQREG 1706

Query: 880  SSITVTRPSNLYNKKKLVGYAICCVFHVL 908
              IT+  P N Y     +G AICCV+  L
Sbjct: 1707 YRITMELPQNCYENDDFLGIAICCVYAPL 1735



 Score = 47.0 bits (110), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 79/190 (41%), Gaps = 25/190 (13%)

Query: 427  GIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH---------PSLLL 477
             I     LK +  SH   L   P+          ILE    L E+H         PS + 
Sbjct: 1913 SIWEFKSLKSLFCSHCSQLQYFPE----------ILENMENLRELHLNETAIKELPSSIE 1962

Query: 478  H-NKLIILNMKDCTSLITLPG-KILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
            H N+L +LN+  C +L+     +I  K  E   L++ P        L      G +    
Sbjct: 1963 HLNRLEVLNLDRCENLLLFKTPQIATKPREAAKLEASPCLWLKFNMLPIAFFVG-IDEGG 2021

Query: 536  FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
             P  + H+  L +L L G   R +P  +  LS L LL+L +C+ L  +P   S+   LR 
Sbjct: 2022 IPTEICHLSSLRQLLLTGNLFRSIPSGVNQLSMLRLLDLGHCQELRQIPALPSS---LRV 2078

Query: 596  LKLSGCSKLK 605
            L +  C++L+
Sbjct: 2079 LDVHECTRLE 2088



 Score = 43.9 bits (102), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 21/201 (10%)

Query: 627 IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIE 686
           I+    + E + +L LL++S   N V+L    +    L  L  +G + LE++P       
Sbjct: 547 IQFTSKAFERMHRLRLLSIS--HNHVQLSKDFVFPYDLTYLRWNG-YSLESLPSNF-HAN 602

Query: 687 SLEELDISGTAVPHSTSWYSYI------PINLMRKSVALKLPSLSGLCSLRKLNLTDCNL 740
           +L  L +  + +     W   +       INL      ++LP+ S + +L +L L+ C +
Sbjct: 603 NLVSLILGNSNI--KLLWKGNMCLRNLRRINLSDSQQLIELPNFSNVPNLEELILSGCII 660

Query: 741 MEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIR 800
           +  +      N+  L+EL L + +   LP+SI  L  L  + L++CK L+ LP    N+R
Sbjct: 661 LLKS------NIAKLEELCLDETAIKELPSSIELLEGLRYLNLDNCKNLEGLPNSICNLR 714

Query: 801 QVRV---NGCASLVTLLDALK 818
            + V    GC+ L  L + L+
Sbjct: 715 FLVVLSLEGCSKLDRLPEDLE 735


>gi|297798298|ref|XP_002867033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297312869|gb|EFH43292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 998

 Score =  365 bits (938), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 255/751 (33%), Positives = 402/751 (53%), Gaps = 49/751 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +++R  ++  L+      +R IGI GM G+GKTT+A+ V+D IS  +EAS F+ N     
Sbjct: 129 INTRVMEIEQLLCKQPWGIRRIGIWGMPGIGKTTLAKTVFDQISGGYEASCFIKNFDMAF 188

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            + GL  L  +   ++LK       N+     + G +L++ +  +V+DDV +    +S  
Sbjct: 189 HEKGLHRLLEEHFGKILKELPRESRNITRS-SLPGEKLRKIRTFVVLDDVHNSLVAESFL 247

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G   WFG GS IIITSRD+ + +   ++ VY+   LN +EALQLF+  AF  +   Q  +
Sbjct: 248 GGFHWFGPGSLIIITSRDKQVFRHFQINHVYEVQSLNENEALQLFSQCAFGKHIREQNLL 307

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS  +I YA G PLAL   G  L G+ + E  +T  +L++  P+EI D+ + S++ L +
Sbjct: 308 ELSKEVIDYANGNPLALRCYGRELKGKKLSEIETTFLKLKLRTPNEIHDLFKSSYEALND 367

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            EK IFLDIACFF+G + DYV   LEGCGF P +GI VL+EKCL+T+  N + MH ++Q+
Sbjct: 368 NEKNIFLDIACFFEGENVDYVIQLLEGCGFFPHVGIGVLVEKCLMTISENRVKMHRIIQD 427

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVL---------------TESTGTELVEGIVLD 345
            G++I   Q+  ++ +  RLW+   +  +L               T + GTE +EGI LD
Sbjct: 428 FGREISNGQTV-QIERCRRLWEPRTIRFLLEDAKLETYGDPKATYTHALGTEDIEGIFLD 486

Query: 346 NYHHENEVYLCASAKAFSKMTNLRLLKI-CN-------LQLPNGLEYLSNRLRLLGWRGY 397
                + +       AF  M +LR LKI C+       L+LP GLE L   LRLL W  Y
Sbjct: 487 I----SNLIFDVKPGAFENMLSLRYLKIFCSSYETYFGLRLPKGLESLPYELRLLHWVNY 542

Query: 398 PLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNL 457
           PL+ LP        +E+ + YS++ +LW G K+L+ LK++ L HS+ L  + D   A N+
Sbjct: 543 PLQSLPQEFDPCHLVELNLSYSQLHKLWGGTKNLEMLKMVRLCHSQQLNEINDIGKAQNI 602

Query: 458 EKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTIS 517
           E + L+GC++L    P++     L ++N+  CT + + P   +  ++E+L+L+   T I 
Sbjct: 603 ELIDLQGCSKLQSF-PAMGQLQHLRVVNLSGCTEIRSFPE--VSPNIEELHLQG--TGIR 657

Query: 518 GLKCLSTLDVSGDLKF-REFPEIVEHMEHLSEL--HLEGTAIRGLPLSIELLSGLVLLNL 574
            L  +ST+++S  +K  RE    +     +S+   H    ++    LS   L  LV LN+
Sbjct: 658 ELP-ISTVNLSPHVKLNRELSNFLTEFPGVSDALNHERLPSVVEAVLSYHHLGKLVCLNM 716

Query: 575 KNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSI 634
           K+C  L  LP  +++L+ L+ L LSGCS+L       R++K   EL++ GT++K++P   
Sbjct: 717 KDCVHLRSLP-QMADLESLKVLNLSGCSELDDIQGFPRNLK---ELYIGGTAVKKLP--- 769

Query: 635 ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
           +L   LE+LN   C +L  +P     L    T   SGC  L   P+ + +  +    D+ 
Sbjct: 770 QLPQSLEVLNAHGCVSLKAIPFGFNHLPRYYT--FSGCSALS--PQVITKFLAKALADVE 825

Query: 695 GTAVPHSTSWYSYIPINLMRKSVALKLPSLS 725
           G A          +  +    S A K P+L+
Sbjct: 826 GIAREFKQELNESLAFSFSVPSPATKKPTLN 856



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 35/175 (20%)

Query: 640 LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP 699
           +EL++L  C  L   P+ +  L+ L+ +NLSGC ++ + PE    IE   EL + GT + 
Sbjct: 602 IELIDLQGCSKLQSFPA-MGQLQHLRVVNLSGCTEIRSFPEVSPNIE---ELHLQGTGIR 657

Query: 700 HSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLN--LTDCNLMEGALPSDIGNLCSLKE 757
                   +PI+ +  S  +KL         R+L+  LT+   +  AL  +   L S+ E
Sbjct: 658 E-------LPISTVNLSPHVKLN--------RELSNFLTEFPGVSDALNHE--RLPSVVE 700

Query: 758 LYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP--PNIRQVRVNGCASL 810
             LS +          HL KL+ + ++DC  L+SLPQ+    +++ + ++GC+ L
Sbjct: 701 AVLSYH----------HLGKLVCLNMKDCVHLRSLPQMADLESLKVLNLSGCSEL 745


>gi|357480743|ref|XP_003610657.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355511992|gb|AES93615.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1128

 Score =  365 bits (938), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 259/739 (35%), Positives = 390/739 (52%), Gaps = 60/739 (8%)

Query: 1   MDSRCEKLRFLMDSGSSD--VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE 58
           +  R E L  L+   S+D   R++GI GMGG+GKTT+  V+YD IS++F A  F++NV +
Sbjct: 200 IQPRVEALERLLKLRSADDGFRVLGIRGMGGIGKTTLVTVLYDKISYQFHACCFIENVSK 259

Query: 59  ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
           I   GG V++Q+Q+L Q ++  +   ++  +   ++ +RL   K+L+V+DD+  ++QLQ 
Sbjct: 260 IYRDGGCVAVQKQILHQTIREKNLEAYSPSEISRIVRNRLHNIKLLVVLDDIDQIEQLQE 319

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L  N +    GSRIIIT+RDEH+LK +G D VY+   ++  EAL L + KAFK+      
Sbjct: 320 LHINPKLLCGGSRIIITTRDEHILKQYGADVVYEAQLMSDSEALDLLHRKAFKSDNSSST 379

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPP--SEILDILQISFD 236
             +L                          + +WR+TL+ L   P     I+ +L+ISF+
Sbjct: 380 FSEL--------------------------IPQWRATLDGLRNNPSLDKRIMTVLRISFE 413

Query: 237 GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
           GL+  E++IFL IACFFKG   DYV   L+ CG HP IGI ++ EK LIT+ NN + MH 
Sbjct: 414 GLEPREREIFLHIACFFKGEKADYVRGILDACGLHPDIGIPLIAEKSLITIRNNEIHMHG 473

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHV-LTESTGTELVEGIVLDNYHHENEVYL 355
           +LQELG+QIVQ Q P E    SRLW   +   V +TE      V+ IVLD     +E + 
Sbjct: 474 MLQELGRQIVQGQHPNEPEFWSRLWLYRDFHRVMMTEMKAPIEVKAIVLDQKEDGSE-FN 532

Query: 356 CASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
              A+  SK+ +L+LL +C+        +LSN L  L W G+P   LPSN+Q+   +E+ 
Sbjct: 533 KLRAEDLSKLGHLKLLILCHKNFSGEPIFLSNSLCYLSWNGFPFDSLPSNIQLHDLVELN 592

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           M  S I +LW+GI+ L  LK M LS+S+NL   P F G  NLE++   GC  L ++HPS+
Sbjct: 593 MPDSNIKQLWEGIQRLPCLKRMDLSNSKNLRTTPSFEGIQNLERIDFTGCINLLQVHPSV 652

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
            L  +L+ L++++CT+L  L                   ++S +  L  L +SG +  R 
Sbjct: 653 GLLTELVFLSLQNCTNLTCLDF----------------GSVSRVWSLRVLRLSGCIGLRN 696

Query: 536 FPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
            P+      +L  L +E    +  +  SI  L+ L  L+L++C  L  +     N+  L 
Sbjct: 697 TPDFTV-AANLEYLDMERCINLSKIDKSIGTLTKLRFLSLRHCTKLFPISNIFDNMTSLT 755

Query: 595 SLKLSGCSKLKK--FPEIVRSMKDLSEL-FLDGT--SIKEVPSSIELLTKLELLNLSDCK 649
           +L L  C        P  V S   L  L FLD +  +I  +P SI  L  LE LNL    
Sbjct: 756 TLDLCECWNFTTLPLPTTVNSPSPLESLIFLDLSFCNISVLPDSIGKLKSLERLNLQG-N 814

Query: 650 NLVRLPSSIIALKSLKTLNLSGCFKLENVPE---TLGQIESL-EELDISGTAVPHSTSWY 705
           +   LPS+   L +L  LNLS C +L+ +P+     GQ +S+      +  +  H +  Y
Sbjct: 815 HFTTLPSTFKRLANLAYLNLSHCHRLKRLPKLPTKSGQSDSVGRYFKTTSGSRDHRSGLY 874

Query: 706 SYIPINLMRKSVALKLPSL 724
            Y    L ++  + + P +
Sbjct: 875 IYDCPKLTKRLFSCEDPGV 893



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 154/588 (26%), Positives = 243/588 (41%), Gaps = 98/588 (16%)

Query: 433  KLKVMILSHSE-----NLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMK 487
            ++K ++L   E     N +R  D +   +L+ LIL  C + +   P + L N L  L+  
Sbjct: 516  EVKAIVLDQKEDGSEFNKLRAEDLSKLGHLKLLIL--CHKNFSGEP-IFLSNSLCYLSW- 571

Query: 488  DCTSLITLPGKILMKSLEKLNL-----KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEH 542
            +     +LP  I +  L +LN+     K L   I  L CL  +D+S     R  P   E 
Sbjct: 572  NGFPFDSLPSNIQLHDLVELNMPDSNIKQLWEGIQRLPCLKRMDLSNSKNLRTTPSF-EG 630

Query: 543  MEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPV-TVSNLKCLRSLKLSG 600
            +++L  +   G   +  +  S+ LL+ LV L+L+NC +L  L   +VS +  LR L+LSG
Sbjct: 631  IQNLERIDFTGCINLLQVHPSVGLLTELVFLSLQNCTNLTCLDFGSVSRVWSLRVLRLSG 690

Query: 601  CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
            C  L+  P+                          +   LE L++  C NL ++  SI  
Sbjct: 691  CIGLRNTPDFT------------------------VAANLEYLDMERCINLSKIDKSIGT 726

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK 720
            L  L+ L+L  C KL  +      + SL  LD+          W      N     +   
Sbjct: 727  LTKLRFLSLRHCTKLFPISNIFDNMTSLTTLDLC-------ECW------NFTTLPLPTT 773

Query: 721  LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLN 780
            + S S L SL  L+L+ CN+    LP  IG L SL+ L L  N F +LP++   L+ L  
Sbjct: 774  VNSPSPLESLIFLDLSFCNI--SVLPDSIGKLKSLERLNLQGNHFTTLPSTFKRLANLAY 831

Query: 781  IELEDCKRLQSLPQLPPNIRQVRVNGCASLVT-----------LLDALKLCKSDSTMIAC 829
            + L  C RL+ LP+LP    Q    G     T           + D  KL K    + +C
Sbjct: 832  LNLSHCHRLKRLPKLPTKSGQSDSVGRYFKTTSGSRDHRSGLYIYDCPKLTKR---LFSC 888

Query: 830  LDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVP----------GSEIPEWFMYQNEG 879
             D         + F  L+   +   + R    +V+P             IP+WF Y+ E 
Sbjct: 889  EDP-------GVPFKWLKRLFKEPRHFRCGFDIVLPLHRKHIDLHGNPLIPQWFDYKFEK 941

Query: 880  SSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNC---FGSYPTHQLNC------HIG 930
             SI   + SN++     VG+A C  F +      +     F S P     C      H  
Sbjct: 942  GSIITIKNSNMH--VDWVGFAFCVAFQIDNRPAVSGSPYRFHSSPLPYPFCLSFESEHTE 999

Query: 931  HGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNH 978
                     ++   AGS+++W++Y+SR+ C+ ++   +   +  E  H
Sbjct: 1000 ECFDMPLSLERNKVAGSNYIWVIYISREHCHFVKTGAQITFKAGEDGH 1047


>gi|3947735|emb|CAA08798.1| NL27 [Solanum tuberosum]
          Length = 821

 Score =  365 bits (938), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 210/497 (42%), Positives = 318/497 (63%), Gaps = 17/497 (3%)

Query: 17  SDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQL 76
           S V ++GI GM G+GKTTIAR ++D +S++FEA  FL +++E  +K G+ SLQ  LLS+L
Sbjct: 217 SGVLIVGIWGMPGVGKTTIARAIFDRLSYQFEAVCFLADIKE--NKCGMHSLQNILLSEL 274

Query: 77  LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITS 136
           LK  DN + N  DG  +L  RL+ KKVL+V+DD+  + QL  LAGN +WFG+GSRII T+
Sbjct: 275 LKEKDNCVNNKEDGRSLLAHRLRFKKVLVVLDDIDHIDQLDYLAGNLDWFGNGSRIIATT 334

Query: 137 RDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV-QLSARIIRYAGGLPL 195
           RD+HL+   G + VY+   L+  +A++LF   AFK  Q   +C  +L+  ++ +A GLPL
Sbjct: 335 RDKHLI---GKNVVYELPTLHDHDAIKLFERYAFKE-QVSDKCFKELTLEVVSHAKGLPL 390

Query: 196 ALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKG 255
           AL+V G F   R + EWRS +++++  P SEI++ L+IS+DGL+ +++ IFLDIACF +G
Sbjct: 391 ALKVFGCFFHERDITEWRSAIKQIKNNPNSEIVEKLKISYDGLETIQQSIFLDIACFLRG 450

Query: 256 NDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPEEL 314
             +DYV   LE C F   IG+ VLI+K L+++  NNT+ MHDL+Q++G+ +V++Q  ++ 
Sbjct: 451 RRKDYVMQILESCDFGADIGLSVLIDKSLVSISGNNTIEMHDLIQDMGKYVVKKQ--KDP 508

Query: 315 GKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKIC 374
           G+RSRLW  ++   V+  +TGT+ VE I + N++         S +A + M  LR+L I 
Sbjct: 509 GERSRLWLTKDFEEVMINNTGTKAVEAIWVPNFNRPR-----FSKEAMTIMQRLRILCIH 563

Query: 375 NLQLPNG-LEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDK 433
           +    +G +EYL N LR   W  YP + LP N +  K + + +  S +  LW G KHL  
Sbjct: 564 DSNCLDGSIEYLPNSLRWFVWNNYPCESLPENFEPQKLVHLDLSLSSLHHLWTGKKHLPF 623

Query: 434 LKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLI 493
           L+ + L  S +L++ PDFT  PNL+ L L  C  L E+H SL    +LI LN+ +C  L 
Sbjct: 624 LQKLDLRDSRSLMQTPDFTWMPNLKYLDLSYCRNLSEVHHSLGYSRELIELNLYNCGRLK 683

Query: 494 TLPGKILMKSLEKLNLK 510
             P  + ++SL+ ++L+
Sbjct: 684 RFPC-VNVESLDYMDLE 699


>gi|105922468|gb|ABF81418.1| NBS type disease resistance protein [Populus trichocarpa]
          Length = 581

 Score =  365 bits (937), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 211/483 (43%), Positives = 304/483 (62%), Gaps = 17/483 (3%)

Query: 27  MGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK-GGLVSLQRQLLSQLLKLADNSIW 85
           MGG+GKTTIA  V++ IS ++E+  F+ NVRE S + GGL+ L+ + LS++L+  +  I 
Sbjct: 1   MGGIGKTTIAEAVFNSISSQYESCCFITNVREKSEECGGLIRLREEFLSRVLEQENLRID 60

Query: 86  NVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTH 145
               G  ++  R++ KKV  V+DDV DV+Q++ L    + FG GSRI++TSRD  +LK +
Sbjct: 61  TPRMGSTLIKERIRHKKVFTVLDDVSDVEQVECLIERHDMFGPGSRILVTSRDRQVLK-N 119

Query: 146 GVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLS 205
             DE+Y+   LN  EA QLF++  FK     ++   LS R + YA G PLAL+VLGSFL 
Sbjct: 120 VADEIYEVEELNCSEARQLFSLSVFKGNHIPKDYKGLSIRAVNYAKGNPLALKVLGSFLF 179

Query: 206 GRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFL 265
            +  ++W + L +LE  P  +I ++L++SFD L + EK IFLDIACFFKG   DYV   L
Sbjct: 180 DQRKEDWENALNKLERNPQLKIYNMLKVSFDALGDEEKNIFLDIACFFKGKQIDYVKRIL 239

Query: 266 EGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEE 325
           +GCGF   IG+  L E+CLIT+ N  L MHDLLQE+  +IV+++S +ELGKRSRLW   +
Sbjct: 240 DGCGFSTNIGVFFLAERCLITISNGKLEMHDLLQEMAFEIVRQESIKELGKRSRLWSPRD 299

Query: 326 VCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI--------CNLQ 377
           V  VLT++ GTE VEGI  D    + E+ L  S+KAF++M NLRLLKI        C + 
Sbjct: 300 VNQVLTKNLGTEKVEGIFFDTSKIK-EIKL--SSKAFARMYNLRLLKIYNSEVGKNCKVY 356

Query: 378 LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKL--K 435
           LP+GL+ LS+ LR L W GYPLK LPSN   +  +E+ + +S++ ELWKG +   +    
Sbjct: 357 LPHGLKSLSDELRYLHWDGYPLKSLPSNFHPENLVELNLSHSKVRELWKGDQMYPETTEH 416

Query: 436 VMILSHSENLIR-MPDFTG-APNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLI 493
           VM L+ +E  I+ +P   G    L  L L  C +L  +  S+ L   ++I+++  C+++ 
Sbjct: 417 VMYLNFNETAIKELPQSIGHRSRLVALNLRECKQLGNLPESICLLKSIVIVDVSGCSNVT 476

Query: 494 TLP 496
             P
Sbjct: 477 KFP 479



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 12/109 (11%)

Query: 509 LKSLPTTISGLKCLSTLDVSGDLKFRE-------FPEIVEHMEHLSELHLEGTAIRGLPL 561
           LKSLP+     + L  L++S   K RE       +PE  EH+ +L   +   TAI+ LP 
Sbjct: 378 LKSLPSNFHP-ENLVELNLSHS-KVRELWKGDQMYPETTEHVMYL---NFNETAIKELPQ 432

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI 610
           SI   S LV LNL+ C+ L  LP ++  LK +  + +SGCS + KFP I
Sbjct: 433 SIGHRSRLVALNLRECKQLGNLPESICLLKSIVIVDVSGCSNVTKFPNI 481



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 22/144 (15%)

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           + L  LH +G  ++ LP +      LV LNL + +  E+                     
Sbjct: 366 DELRYLHWDGYPLKSLPSNFHP-ENLVELNLSHSKVRELWKGD----------------- 407

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
            + +PE    +  L+    + T+IKE+P SI   ++L  LNL +CK L  LP SI  LKS
Sbjct: 408 -QMYPETTEHVMYLN---FNETAIKELPQSIGHRSRLVALNLRECKQLGNLPESICLLKS 463

Query: 664 LKTLNLSGCFKLENVPETLGQIES 687
           +  +++SGC  +   P   G   S
Sbjct: 464 IVIVDVSGCSNVTKFPNIPGNTRS 487


>gi|356528847|ref|XP_003533009.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1137

 Score =  365 bits (937), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 246/679 (36%), Positives = 383/679 (56%), Gaps = 49/679 (7%)

Query: 2   DSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS 61
           D     +  L+   S +VR+IGI G GG+GKTT+A  ++  +S ++E + FL+NV E S 
Sbjct: 193 DENYTSIESLLKIDSMEVRVIGIWGKGGIGKTTLAAAIFHKVSFQYEGTCFLENVAEESK 252

Query: 62  KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAG 121
           + GL     +L S+LL+   N   N     + +  RL+RKKV +V+DDV   + L++L G
Sbjct: 253 RHGLNYACNKLFSKLLREDINIDTNKVIPSN-VPKRLRRKKVFIVLDDVNTPQLLENLVG 311

Query: 122 -NREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
              EW G+GSR+I+T+RD H+LK+ GV+++++   +N+  +L+LF++ AF    P +E  
Sbjct: 312 AGAEWLGAGSRVIVTTRDRHVLKSRGVEKIHEVKEMNFHNSLKLFSLNAFGKTYPTEEYE 371

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS R++ YA G+PLAL+VLGSFL  +S +EW S L +L+  P  EI  +L++S+DGL +
Sbjct: 372 ELSKRVMVYAKGIPLALKVLGSFLRSKSENEWDSALTKLKKIPNQEIQTVLRLSYDGLDD 431

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLIT----VHNNT----L 292
            +K IFLDIACFFKG   D VT  L  CGF   IGI+ L++K LIT    +H++T    +
Sbjct: 432 GDKNIFLDIACFFKGQKGDSVTKVLNACGFSADIGIKNLLDKALITTTTDMHDSTTDSCI 491

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            MHDL+QE+G+ IV+ +S +  G+RSRLW  EEV  VLT +TGT  ++GI L+    ++ 
Sbjct: 492 DMHDLIQEMGRGIVREESIDNPGQRSRLWDPEEVNDVLTNNTGTGAIQGIWLEMSQIQD- 550

Query: 353 VYLCASAKAFSKMTNLRLL----------KICNLQLPNGLEYLSNRLRLLGWRGYPLKFL 402
             +  S+K+F KM NLRLL          +I ++ LP GLE+L  +LR LGW G PL+ L
Sbjct: 551 --IKLSSKSFRKMPNLRLLAFQSLNGNFKRINSVYLPKGLEFLPKKLRYLGWNGCPLESL 608

Query: 403 PSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
           PS    +K +E+ M YS + +LW G+++L  L+ + L    NL+  P+ + AP L+++ +
Sbjct: 609 PSTFCPEKLVELSMRYSNVQKLWHGVQNLPNLEKIDLFGCINLMECPNLSLAPKLKQVSI 668

Query: 463 EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL-----NLKSLPTTIS 517
             C  L  + PS+L   KL ILN+  CTSL +L      +SL+ L      L  LP ++ 
Sbjct: 669 SHCESLSYVDPSILSLPKLEILNVSGCTSLKSLGSNTWSQSLQHLYLEGSGLNELPPSVL 728

Query: 518 GLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNC 577
            +K L     S +    + PE           +     +   P   +  +   L  +   
Sbjct: 729 HIKDLKIFASSINYGLMDLPE-----------NFSNDIVLSAPREHDRDTFFTLHKI--- 774

Query: 578 RSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELL 637
                  +  S  + +  L    C  L + P+ +  +  L  L    ++I  +P S++ L
Sbjct: 775 -------LYSSGFQSVTGLTFYNCQSLGEIPDSISLLSSLLFLSFLHSNIISLPESLKYL 827

Query: 638 TKLELLNLSDCKNLVRLPS 656
            +L  L + +CK L R+P+
Sbjct: 828 PRLHRLCVGECKMLRRIPA 846


>gi|255542420|ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223548234|gb|EEF49725.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score =  365 bits (936), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 260/743 (34%), Positives = 399/743 (53%), Gaps = 80/743 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DSR + +   +  GS+D  +  I G+GG+GKTTIA+ VY+L    F+ S FL NVR+ S
Sbjct: 188 IDSRVKDINLWLQDGSTDPGIAIIYGIGGVGKTTIAKTVYNLNLDRFKGSCFLANVRKAS 247

Query: 61  SK-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            +  GL+ LQ+QL+ +     +N I +V +G   +   +  K+VL+V+DDV ++ QL + 
Sbjct: 248 KEPNGLIFLQKQLVEKFRNGKENKIDSVDEGSIKVIDVISCKRVLIVLDDVDELDQLNAF 307

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G       GS+II+T+R E LL  H   + ++   L+ +++LQLF+  AF+   P++  
Sbjct: 308 IGTWNSLFQGSKIIVTTRHERLLNPHDTQKKFRVKELDDNDSLQLFSWHAFRQNHPIEGY 367

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            + S  ++++  G+PLALEVLGS+LS +  DEW S LE+L+  P  +I   LQIS+D LQ
Sbjct: 368 KEHSESVVKHCCGVPLALEVLGSYLSDKMADEWESELEKLKAIPHPKIQKSLQISYDSLQ 427

Query: 240 ELE-KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDL 297
           + + K +FL IACFF G D+DYV   L+GC  +  +GI+ LI++ L+T++ +N L MH L
Sbjct: 428 DDKYKNLFLHIACFFTGRDKDYVVKVLDGCELYAKVGIQNLIDRHLVTINKDNKLMMHPL 487

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD------------ 345
           L+++G++IV+++SPE  G RSRLW  E+   VL E+ GTE + G+ LD            
Sbjct: 488 LRDMGREIVRQESPEHPGSRSRLWHHEDTLTVLRENIGTEAIRGLTLDLQIIMQEQQHSI 547

Query: 346 -------NYHHE--------------------------------NEVYLCASAKAFSKMT 366
                    H+E                                NEV      KAF+KM 
Sbjct: 548 SCINCAKRQHYEDLISKYREKRSRLGFFSWQPAEVGLIPPFPMSNEVVF--ETKAFAKMR 605

Query: 367 NLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWK 426
            L+LL++  ++L    E+    L  L W G+P+K +P  L ++  + + M YS +   W 
Sbjct: 606 QLKLLQLNYVKLDGRYEHFPRNLIWLCWHGFPVKSIPLKLCLENLVVLDMRYSNLKHAWI 665

Query: 427 GIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNM 486
           G + L +LK++  SHS  L+  PD +G PNLE+L L+ C  L E+H S+    KL++LN+
Sbjct: 666 GARGLKQLKILDFSHSYGLVSTPDLSGLPNLERLKLKSCINLVEVHKSIENLEKLVLLNL 725

Query: 487 KDCTSLITLPGKI-LMKSLEKL------NLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
           KDC  L  LP KI L++SLEKL       L  L + +  ++ L  L + G   F+ +   
Sbjct: 726 KDCKRLRKLPRKIVLLRSLEKLILSGCSELDKLSSELRKMESLKVLHMDG---FKHYTAK 782

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
              +   S L         L L+  L   L  L+L +C  L    V +S L  L+ L LS
Sbjct: 783 SRQLTFWSWLSRRQGMDSSLALTF-LPCSLDHLSLADC-DLSDDTVDLSCLSSLKCLNLS 840

Query: 600 GCSKLKKFPEIVRSMKDLSELFLDG----TSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           G S +   P+ +  +  L  L LD      S+ E+P+S      L  LN  +C +L R+ 
Sbjct: 841 GNS-ISCLPKTISGLTKLESLVLDNCRSLQSLSELPAS------LRELNAENCTSLERIT 893

Query: 656 SSIIALKSLKTLNLSGCFKLENV 678
           +    + SL+ LNL+GC +L  V
Sbjct: 894 NLPNLMTSLR-LNLAGCEQLVEV 915



 Score =  136 bits (342), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 135/427 (31%), Positives = 209/427 (48%), Gaps = 58/427 (13%)

Query: 519  LKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCR 578
            LK L    V  D ++  FP       +L  L   G  ++ +PL +  L  LV+L+++   
Sbjct: 607  LKLLQLNYVKLDGRYEHFPR------NLIWLCWHGFPVKSIPLKL-CLENLVVLDMRYS- 658

Query: 579  SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELL 637
            +L+   +    LK L+ L  S    L   P++   + +L  L L    ++ EV  SIE L
Sbjct: 659  NLKHAWIGARGLKQLKILDFSHSYGLVSTPDL-SGLPNLERLKLKSCINLVEVHKSIENL 717

Query: 638  TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG-- 695
             KL LLNL DCK L +LP  I+ L+SL+ L LSGC +L+ +   L ++ESL+ L + G  
Sbjct: 718  EKLVLLNLKDCKRLRKLPRKIVLLRSLEKLILSGCSELDKLSSELRKMESLKVLHMDGFK 777

Query: 696  --TAVPHSTSWYSYIPINL-MRKSVALK-LPSLSGLCSLRKLNLTDCNLMEGALPSDIGN 751
              TA     +++S++     M  S+AL  LP     CSL  L+L DC+L +  +  D+  
Sbjct: 778  HYTAKSRQLTFWSWLSRRQGMDSSLALTFLP-----CSLDHLSLADCDLSDDTV--DLSC 830

Query: 752  LCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL- 810
            L SLK L LS NS   LP +I+ L+KL ++ L++C+ LQSL +LP ++R++    C SL 
Sbjct: 831  LSSLKCLNLSGNSISCLPKTISGLTKLESLVLDNCRSLQSLSELPASLRELNAENCTSLE 890

Query: 811  -----VTLLDALKL----CKS----------------DSTMIACLDSLKLLGNKSLAFSM 845
                   L+ +L+L    C+                 D  M   L    L   +++   M
Sbjct: 891  RITNLPNLMTSLRLNLAGCEQLVEVQGFFKLEPINNHDKEMANMLGLFNLGPVETIKVEM 950

Query: 846  LREYLEAVSNTRQHL-------SVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVG 898
                      T   +       S+ +PGSE+P W+  QNEG  I+ T P +  + +K+ G
Sbjct: 951  FSVMTMTSRITPPKVLHECGICSIFLPGSEVPGWYSPQNEGPLISFTMPPS--HVRKVCG 1008

Query: 899  YAICCVF 905
              IC V+
Sbjct: 1009 LNICIVY 1015


>gi|15238808|ref|NP_197338.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332005162|gb|AED92545.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1210

 Score =  365 bits (936), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 293/904 (32%), Positives = 444/904 (49%), Gaps = 127/904 (14%)

Query: 16   SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGG----------- 64
            SSDVRMIGI G  G+GKTTIARV+YD IS +F+ S F++N+R    KG            
Sbjct: 252  SSDVRMIGILGPPGIGKTTIARVLYDQISEKFQFSAFIENIRLSYWKGWHDEGNLDFPVE 311

Query: 65   --------LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQL 116
                     ++LQR+LLS+L    D  + +    +  +  RL+  KVL+++D V  ++QL
Sbjct: 312  IMTGDRQRKLNLQRRLLSELFNQKDIQVRH----LGAVQERLRDHKVLVILDGVDQLEQL 367

Query: 117  QSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
             +LA   +WFG GSRIIIT++D+ LL+ H ++ VYK      DEALQ+F + AF    P 
Sbjct: 368  TALAKETQWFGYGSRIIITTQDQRLLRAHEINHVYKVDLPATDEALQIFCLYAFGQKFPY 427

Query: 177  QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
                +L+      AG LPL L VLGS+L G S++EW++ L RL      EI   L+ +++
Sbjct: 428  DGFKKLAREFTALAGELPLGLRVLGSYLRGMSLEEWKNALPRLRTSLDGEIEKTLRFAYN 487

Query: 237  GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
             L + +K +FL IAC F G   ++V  +L         G  VL  K LI+     + MH 
Sbjct: 488  VLSDKDKSLFLHIACLFNGCQVNHVKQWLANSSLDVNHGFEVLSNKSLISTDMGLVRMHS 547

Query: 297  LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
            LLQ+LG  IV++QS  E  KR  L    E+  V+T++TGT  + GI+L  +  + E  L 
Sbjct: 548  LLQQLGVDIVRKQSIGEPEKRQFLVDVNEISDVITDNTGTGTILGIML--HVSKIEDVLV 605

Query: 357  ASAKAFSKMTNLRLLKI--C---NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
                 F +MTNL+ L +  C    L LP GL  L  ++RLL W   PL   PS       
Sbjct: 606  IEETVFDRMTNLQFLILDECLRDKLNLPLGLNCLPRKIRLLRWDYCPLSIWPSKFSAKFL 665

Query: 412  IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
            +E+ M  ++  +LW+GI+ L  LK M L  + NL  +PD + A NLE L+L  CT L EI
Sbjct: 666  VELIMRANKFEKLWEGIQPLKNLKRMELGDARNLKEIPDLSNATNLESLLLSFCTSLLEI 725

Query: 472  HPSLLLHNKLIILNMKDCTSLITLPGKIL-MKSLEKLNLKS------LPTTISG---LKC 521
              S+     L  L++  C SL+ L   I    SLE+LNL +      LP  + G   ++ 
Sbjct: 726  PSSIRGTTNLKELDLGGCASLVKLSSCICNATSLEELNLSACSNLVELPCALPGDSNMRS 785

Query: 522  LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
            LS L ++G  + + FPEI  +++   EL+L GTAI  +P SI L S L  L++  C++L+
Sbjct: 786  LSKLLLNGSSRLKTFPEISTNIQ---ELNLSGTAIEEVPSSIRLWSRLDKLDMSRCKNLK 842

Query: 582  ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLE 641
            + P     +  L                      +LSE     T I+++P  +E      
Sbjct: 843  MFPPVPDGISVL----------------------NLSE-----TEIEDIPPWVE------ 869

Query: 642  LLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHS 701
              NLS  ++ V     +I  K L  ++LS   K+E V     QI   +E D+SG ++ + 
Sbjct: 870  --NLSQLRHFV-----MIRCKKLDNISLSRISKMEGV--HCLQITRGDE-DVSGDSIVN- 918

Query: 702  TSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLS 761
              WYS  P     +S                      ++++  LP  +    S   L+  
Sbjct: 919  IRWYSNFPNQWTLQS----------------------DMLQICLPELV--YTSPVSLHFI 954

Query: 762  KNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCK 821
             N F ++P  I +LS+L  +    C +L SLPQL   +  +    C SL           
Sbjct: 955  SNEFKTIPDCIKNLSQLHQLSFYRCHKLVSLPQLSDCLSSLDAENCVSL----------- 1003

Query: 822  SDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTR-QHLSVVVPGSEIPEWFMYQNEGS 880
               T+     +  +  N     ++ +E  E +  +  +H   ++P  E+P +F+++  G 
Sbjct: 1004 --ETIDGSFHNPDIRLNFLNCNNLNQEARELIQKSVCKH--ALLPSGEVPAYFIHRAIGD 1059

Query: 881  SITV 884
            S+T+
Sbjct: 1060 SVTI 1063


>gi|356514970|ref|XP_003526174.1| PREDICTED: TMV resistance protein N [Glycine max]
          Length = 1113

 Score =  364 bits (935), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 237/635 (37%), Positives = 365/635 (57%), Gaps = 39/635 (6%)

Query: 1   MDSRCEKL-RFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           M+SR ++L + L     SDVR++GI GMGG+GKTT+A  +Y+ I+++F+   F+D+V  I
Sbjct: 206 MESRVKELEKCLKLESVSDVRVVGISGMGGIGKTTLASALYEKIAYQFDFHCFVDDVNYI 265

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
             + G + +Q+QLLSQ L   +  I N   G  ++G+RL+ K+ L+V D+V  V+QL+  
Sbjct: 266 YRRSGSLGVQKQLLSQCLNDKNLEICNASVGTYLIGTRLRNKRGLIVFDNVNQVEQLRMF 325

Query: 120 AGNREWF-----GSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
            G+RE       G GSRIII SRDEH+L+THGV  VY+   L  D A+QLF   AFK   
Sbjct: 326 TGSRETLLLECLGGGSRIIIISRDEHILRTHGVHHVYEVQPLEDDNAVQLFCKNAFKCDY 385

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
            + +   L+  ++ +A G PLA+EV+G  L GR+V +WR  L RL      +I+D+L+IS
Sbjct: 386 IMSDYKMLTYDVLSHADGHPLAIEVIGKSLHGRNVSQWRGILVRLSDNKSKDIMDVLRIS 445

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTN----FLEGCGFHPVIGIRVLIEKCLITVHNN 290
           +D L+E +++IFLDIACFF   D+DY  +     L+  GF+P IG+++L++K LIT+ + 
Sbjct: 446 YDDLEENDREIFLDIACFF---DQDYFEHCEEEILDFRGFNPEIGLQILVDKSLITIFDG 502

Query: 291 TLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDN--YH 348
            ++MH LL++LG+ IV+ +SP+E  K SRLW+ E++  V++ +   + +E IV+D+  + 
Sbjct: 503 RIYMHSLLRDLGKCIVREKSPKEPRKWSRLWECEDLYKVMSNNMEAKNLEAIVVDDKSWM 562

Query: 349 HENEVYLCASAKA-----------FSKMTNLRLLKICNLQ----LPNGLEYLSNRLRLLG 393
             N +    +              +  +      ++C           L YLSN L  L 
Sbjct: 563 FFNTIMRVDALSKMKNLKLLKLPEYDSLYGDEEEELCTYTKKDFFSGNLNYLSNELGYLI 622

Query: 394 WRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTG 453
           W+ YP   LP   Q     E+ + +S I  LW   + +  L+ + +S+ + LI +P+F  
Sbjct: 623 WQCYPFNSLPQCFQPHNLFELDLSWSSIQHLWDSTQPIPNLRRLNVSYCKYLIEVPNFGE 682

Query: 454 APNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------ 507
           A NL  L LEGC +L +IHPS+    KL  LN+KDC SL+ LP  +   +LE+L      
Sbjct: 683 ALNLYWLNLEGCVQLRQIHPSIGHLRKLTALNLKDCKSLVNLPHFVEELNLEELNLKGCE 742

Query: 508 NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELL 566
            L+ +  +I  L+ L+ L+++        P  VE + +L EL+L+G   +R +  SI  L
Sbjct: 743 ELRQIDPSIGRLRKLTALNLTDCKSLVNLPHFVEDL-NLQELNLKGCVQLRQIHSSIGHL 801

Query: 567 SGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
             L  LNL +C+SL  LP  V +L  L  L L GC
Sbjct: 802 RKLTALNLIDCKSLVNLPHFVEDLN-LEELNLKGC 835



 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 119/484 (24%), Positives = 179/484 (36%), Gaps = 113/484 (23%)

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSI 627
             L  LNL+ C  L  +  ++ +L+ L +L L  C  L   P  V  +            +
Sbjct: 685  NLYWLNLEGCVQLRQIHPSIGHLRKLTALNLKDCKSLVNLPHFVEELNLEELNLKGCEEL 744

Query: 628  KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
            +++  SI  L KL  LNL+DCK+LV LP  +  L +L+ LNL GC +L  +  ++G +  
Sbjct: 745  RQIDPSIGRLRKLTALNLTDCKSLVNLPHFVEDL-NLQELNLKGCVQLRQIHSSIGHLRK 803

Query: 688  LEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPS 747
            L  L                   NL+     + LP      +L +LNL  C  +     S
Sbjct: 804  LTAL-------------------NLIDCKSLVNLPHFVEDLNLEELNLKGCEELSLKELS 844

Query: 748  DIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI------RQ 801
             + +L                              L+ CKRL+ LP+LP           
Sbjct: 845  KLLHL-----------------------------NLQHCKRLRYLPELPSRTDWPGSWTP 875

Query: 802  VRVNGCASLVTLLDALKLCKSD-------STMIACLDSLKLLGNKSL-AFSMLREYLEAV 853
            V+       + + +  +L + D       S MI  L  L L G   L +F +        
Sbjct: 876  VKHEEYGLGLNIFNCPELVERDCCTNNCFSWMIQILQCLSLSGFSGLFSFPL-------- 927

Query: 854  SNTRQHLSVVVPGSEIPEWFMYQNEGSS--ITVTRPSNLYNKKKLVGYAICCVFHVLKNS 911
                   S ++PGSEIP WF  ++ G+   I + R     + K  +G A+  +F V K  
Sbjct: 928  ------FSSIIPGSEIPRWFKKEHVGTGNVINIDRSHFTQHYKNRIGIALGVIFVVHKER 981

Query: 912  R------------GNNCFGSYPTHQL-----NCHIG-----HGIYGIGFRDKFGQAGSDH 949
            R               C  S P  Q      + HI      H    + FR+      SDH
Sbjct: 982  RMPPPDMEQPSILSITCGPSIPPQQREGVREDLHIPVHYREHLHIPVLFREDLVTEESDH 1041

Query: 950  LWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEEL 1009
            + L +  R   Y   L +ES         + V          EVK      VY  ++E L
Sbjct: 1042 VGLFFFKRP--YFDELKVESRFRDLHDEDLYV----------EVKKYWYRWVYKQDLELL 1089

Query: 1010 DQTT 1013
            + TT
Sbjct: 1090 NLTT 1093



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 12/215 (5%)

Query: 601 CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           C      P+  +   +L EL L  +SI+ +  S + +  L  LN+S CK L+ +P+   A
Sbjct: 625 CYPFNSLPQCFQP-HNLFELDLSWSSIQHLWDSTQPIPNLRRLNVSYCKYLIEVPNFGEA 683

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDI----SGTAVPHSTSWYSYIPINLMRKS 716
           L +L  LNL GC +L  +  ++G +  L  L++    S   +PH     +   +NL    
Sbjct: 684 L-NLYWLNLEGCVQLRQIHPSIGHLRKLTALNLKDCKSLVNLPHFVEELNLEELNLKGCE 742

Query: 717 VALKL-PSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITH 774
              ++ PS+  L  L  LNLTDC  +   LP  + +L +L+EL L        + +SI H
Sbjct: 743 ELRQIDPSIGRLRKLTALNLTDCKSLVN-LPHFVEDL-NLQELNLKGCVQLRQIHSSIGH 800

Query: 775 LSKLLNIELEDCKRLQSLPQLPP--NIRQVRVNGC 807
           L KL  + L DCK L +LP      N+ ++ + GC
Sbjct: 801 LRKLTALNLIDCKSLVNLPHFVEDLNLEELNLKGC 835


>gi|356517237|ref|XP_003527295.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1098

 Score =  364 bits (935), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 269/752 (35%), Positives = 397/752 (52%), Gaps = 92/752 (12%)

Query: 17  SDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQL 76
           +DV ++GI GMGG+GK+T+ R +Y+ ISH F +  ++D+V ++    G + +Q+QLLSQ 
Sbjct: 216 NDVPVVGITGMGGIGKSTLGRSLYERISHRFNSCCYIDDVSKLYRLEGTLGVQKQLLSQS 275

Query: 77  LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNR-----EWFGSGSR 131
           L   +  I NV DG  +   RL   K L+V+D+V   KQL    G R     +  G GS 
Sbjct: 276 LNERNLEICNVCDGTLLAWKRLPNAKALIVLDNVDQDKQLDMFTGGRNDLLRKCLGKGSI 335

Query: 132 IIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAG 191
           +II SRD+ +LK HGVD +Y+   LN ++ALQLF  KAFK    + +  +L++ ++ +  
Sbjct: 336 VIIISRDQQILKAHGVDVIYQVEPLNDNDALQLFCKKAFKNNYIMSDFEKLTSDVLSHCQ 395

Query: 192 GLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIAC 251
           G PLA+EV+GS+L  +    WRS L  L       I+++L+ISFD L++  K+IFLDIAC
Sbjct: 396 GHPLAIEVIGSYLFDKDFSHWRSALVSLRENKSKSIMNVLRISFDQLEDTHKEIFLDIAC 455

Query: 252 FFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSP 311
           FF  +D +YV   L+  GF+P   ++VL++K LIT+ +  + MHDLL +LG+ IV+ +SP
Sbjct: 456 FFNDDDVEYVKEVLDFRGFNPEYDLQVLVDKSLITM-DEEIGMHDLLCDLGKYIVREKSP 514

Query: 312 EELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLL 371
            +  K SRLW  ++   V++++   E VE I++++ +            A S M++L+LL
Sbjct: 515 RKPWKWSRLWDIKDFHKVMSDNKVAENVEVIIIEDPYDILRTR-TMRVDALSTMSSLKLL 573

Query: 372 KI------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELW 425
            +        +     L  LSN L  L W  YP + LP + + DK +E+ + YS I +LW
Sbjct: 574 YLGYWNVGFEINFSGTLAKLSNELGYLSWEKYPFECLPPSFEPDKLVELRLPYSNIKQLW 633

Query: 426 KGIKHL-DKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIIL 484
           +G K L + L+ + LS S+NLI+MP    A  LE L LEGC +L EI  S++L  KL  L
Sbjct: 634 EGTKPLPNNLRHLNLSGSKNLIKMPYIGDALYLESLDLEGCIQLEEIGLSVVLSRKLTSL 693

Query: 485 NMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHME 544
           N+++C SLI LP     +  E L LK+L   + G K L  +D S                
Sbjct: 694 NLRNCKSLIKLP-----RFGEDLILKNL--DLEGCKKLRHIDPS---------------- 730

Query: 545 HLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKL 604
                             I LL  L  LNLKNC++L  LP ++  L  L+ L LSGCSKL
Sbjct: 731 ------------------IGLLKKLEYLNLKNCKNLVSLPNSILGLNSLQYLILSGCSKL 772

Query: 605 KK---FPEIVRSMKDLSELFLDGTSIK-EVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
                F E+ R  + L ++ +DG  I  +  SS     +  +  L        +PSS I 
Sbjct: 773 YNTELFYEL-RDAEQLKKIDIDGAPIHFQSTSSYSRQHQKSVSCL--------MPSSPI- 822

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK 720
              +  L+LS C  L  +P+ +G +  LE LD+SG                         
Sbjct: 823 FPCMSKLDLSFC-NLVEIPDAIGIMSCLERLDLSGNNFA--------------------T 861

Query: 721 LPSLSGLCSLRKLNLTDCNLMEG--ALPSDIG 750
           LP+L  L  L  L L  C  ++    LPS IG
Sbjct: 862 LPNLKKLSKLVCLKLQHCKQLKSLPELPSRIG 893



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 152/470 (32%), Positives = 227/470 (48%), Gaps = 53/470 (11%)

Query: 496  PGKILMKSLEKLNLKSLPTTISGL-KCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG- 553
            P K++   L   N+K L      L   L  L++SG     + P I + + +L  L LEG 
Sbjct: 616  PDKLVELRLPYSNIKQLWEGTKPLPNNLRHLNLSGSKNLIKMPYIGDAL-YLESLDLEGC 674

Query: 554  TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRS 613
              +  + LS+ L   L  LNL+NC+SL  LP    +L  L++L L GC KL+        
Sbjct: 675  IQLEEIGLSVVLSRKLTSLNLRNCKSLIKLPRFGEDL-ILKNLDLEGCKKLR-------- 725

Query: 614  MKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCF 673
                            +  SI LL KLE LNL +CKNLV LP+SI+ L SL+ L LSGC 
Sbjct: 726  ---------------HIDPSIGLLKKLEYLNLKNCKNLVSLPNSILGLNSLQYLILSGCS 770

Query: 674  KLENVP--ETLGQIESLEELDISGTAVP-HSTSWYSYIPINLMRKSVALKLPSLSGLCSL 730
            KL N      L   E L+++DI G  +   STS YS       +KSV+  +PS      +
Sbjct: 771  KLYNTELFYELRDAEQLKKIDIDGAPIHFQSTSSYS----RQHQKSVSCLMPSSPIFPCM 826

Query: 731  RKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQ 790
             KL+L+ CNL+E  +P  IG +  L+ L LS N+F +LP ++  LSKL+ ++L+ CK+L+
Sbjct: 827  SKLDLSFCNLVE--IPDAIGIMSCLERLDLSGNNFATLP-NLKKLSKLVCLKLQHCKQLK 883

Query: 791  SLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYL 850
            SLP+LP  I           VT        K+   +  C + +       + FS + +  
Sbjct: 884  SLPELPSRI---------GFVTKALYYVPRKAGLYIFNCPELVDRERCTDMGFSWMMQLC 934

Query: 851  EAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKN 910
            +     +  +  V PGSEI  W   ++EG+ +++   S + +    +G A C +F V   
Sbjct: 935  QY--QVKYKIESVSPGSEIRRWLNNEHEGNCVSLD-ASPVMHDHNWIGVAFCAIFVVPHE 991

Query: 911  SRGNNCFG--SYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQ 958
            +     F    YP H L   I   +YG     +     SDH+WL +++R 
Sbjct: 992  TLSAMSFSETEYPFH-LFGDIRVDLYG-DLDLELVLDKSDHMWLFFVNRH 1039


>gi|357462143|ref|XP_003601353.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355490401|gb|AES71604.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1133

 Score =  364 bits (934), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 254/730 (34%), Positives = 402/730 (55%), Gaps = 47/730 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++ + E+++ L+  GS+DVR +G+ GMGG+GKTT+A+ +Y  +  +F+    L+NV E S
Sbjct: 262 IEEKYEEVKSLLKIGSNDVRGLGLWGMGGIGKTTLAKHLYSKLCSQFDHHCLLENVSEES 321

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           ++ GL  ++ QL S+LL+L  ++  N+   I M   RL  KK L+V+DDV  ++Q ++L 
Sbjct: 322 TRCGLKGVRNQLFSKLLELRPDAP-NLETTISM--RRLVCKKSLIVLDDVATLEQAENLN 378

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
                 G GSR+I+T+RD+ +        +Y+   LN DE+L++F ++AF+   P     
Sbjct: 379 IVNNCLGPGSRVIVTTRDKQVCSQFNKCAIYEVKRLNKDESLEVFCLEAFREKYPKIGYG 438

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            LS R I Y GG PL L+VLG+    +S + W S LE+L+  P   I D+L++SFDGL  
Sbjct: 439 DLSKRAIGYCGGNPLGLKVLGTNFRTKSKEVWESELEKLKKIPNRRIHDVLKLSFDGLDC 498

Query: 241 LEKKIFLDIACFF---KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHD 296
            ++ IFLDI CFF   K  DRD++T   +   F    GI VL  K LI     N + MHD
Sbjct: 499 TQQDIFLDIVCFFFLGKYIDRDFLTTLSDASNFFAESGIEVLSNKALIVFRICNLIDMHD 558

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL E+G++IV++QSP+  G RSRLW   EVC  L    GTE+VE I+ D      ++YL 
Sbjct: 559 LLVEMGREIVKQQSPKNPGSRSRLWDPMEVCDTLKYKKGTEVVEVIIFD-ISEIRDLYL- 616

Query: 357 ASAKAFSKMTNLRLLKICN-LQLPN-----------GLEYLSNRLRLLGWRGYPLKFLPS 404
            ++ +F  MTNLR L I N +QLP+           GLE+LS++LR L W G+PL+ LPS
Sbjct: 617 -TSDSFKSMTNLRCLHIFNKMQLPDEGKHYNVHFLQGLEWLSDKLRHLYWVGFPLESLPS 675

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
               +  + + M  S++ +LW GI+ L  LK + L +S++LI MPD + AP L  + L+ 
Sbjct: 676 TFSAEWLVRLEMRGSKLKKLWDGIQKLGNLKSIDLCYSKDLIEMPDLSRAPKLSLVSLDF 735

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLST 524
           C  L ++HPS+L   KL  L ++ C ++ +L   I  KSL +L+L               
Sbjct: 736 CESLSKLHPSILTAPKLEALLLRGCKNIESLKTNISSKSLRRLDLT-------------- 781

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
            D S  ++F    E +E +  +    LE  +      S ++      L+L  C+ L I+ 
Sbjct: 782 -DCSSLVEFSMMSEKMEELSLIQTFKLECWSFMFCKSSGQIRPS--CLSLSRCKKLNIIG 838

Query: 585 VTVSNLKCLRSLKLSGCSKLK--KFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLTKLE 641
             +SN   L  L+L GC ++       I+  ++ L EL L   S ++ +P +I+  +KL 
Sbjct: 839 SKLSND--LMDLELVGCPQINTSNLSLILDELRCLRELNLSSCSNLEALPENIQNNSKLA 896

Query: 642 LLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV--PETLGQIESLEELDISGTAVP 699
           +LNL +C+ L  LP    +L  L+ +N +    ++++  P     +  L  +D  G  + 
Sbjct: 897 VLNLDECRKLKSLPKLPASLTELRAINCTD-LDIDSIQRPMLENILHKLHTIDNEGDRIL 955

Query: 700 HSTSWYSYIP 709
            +   ++++P
Sbjct: 956 DTNFGFTFLP 965



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 125/496 (25%), Positives = 208/496 (41%), Gaps = 78/496 (15%)

Query: 544  EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            + L  L+  G  +  LP +      LV L ++  + L+ L   +  L  L+S+ L     
Sbjct: 658  DKLRHLYWVGFPLESLPSTFSA-EWLVRLEMRGSK-LKKLWDGIQKLGNLKSIDLCYSKD 715

Query: 604  LKKFPEIVRSMKDLSELFLD-GTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
            L + P++ R+ K LS + LD   S+ ++  SI    KLE L L  CKN+  L ++I + K
Sbjct: 716  LIEMPDLSRAPK-LSLVSLDFCESLSKLHPSILTAPKLEALLLRGCKNIESLKTNISS-K 773

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
            SL+ L+L+ C    ++ E     E +EEL +  T      S+       +  KS     P
Sbjct: 774  SLRRLDLTDC---SSLVEFSMMSEKMEELSLIQTFKLECWSF-------MFCKSSGQIRP 823

Query: 723  SLSGLCSLRKLNLTDCNL--------MEGALPSDIGNLC-------SLKELYLSKNS-FV 766
            S   L   +KLN+    L        + G    +  NL         L+EL LS  S   
Sbjct: 824  SCLSLSRCKKLNIIGSKLSNDLMDLELVGCPQINTSNLSLILDELRCLRELNLSSCSNLE 883

Query: 767  SLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTM 826
            +LP +I + SKL  + L++C++L+SLP+LP ++ ++R   C  L                
Sbjct: 884  ALPENIQNNSKLAVLNLDECRKLKSLPKLPASLTELRAINCTDLD--------------- 928

Query: 827  IACLDSLK--LLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
               +DS++  +L N       +    + + +T    +  +PG  +P+ F +    SSI +
Sbjct: 929  ---IDSIQRPMLENILHKLHTIDNEGDRILDTNFGFT-FLPGDHVPDKFGFLTRESSIVI 984

Query: 885  TRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNC-HIGHGIYGIGFRDKFG 943
                 L  K KL     C    +L    G+     Y +   +C   G  I+         
Sbjct: 985  P----LDPKCKLSALIFCI---ILSGRYGD----YYESVCCDCFQNGKIIFNWDQVVSAE 1033

Query: 944  QAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVS---------FEPWLGQGLEVK 994
                DH+ L   +   C++    L+  +   E +H ++S          E W   G  +K
Sbjct: 1034 MLTEDHVLLSSFTEIWCFE---RLDWTMNESEGDHCSISCEFMCRANEAEEWSTDG--IK 1088

Query: 995  MCGLHPVYMDEVEELD 1010
             CG+ PVY  E E ++
Sbjct: 1089 GCGVLPVYSLESESVE 1104


>gi|357436335|ref|XP_003588443.1| Disease resistance-like protein [Medicago truncatula]
 gi|355477491|gb|AES58694.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1057

 Score =  364 bits (934), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 254/749 (33%), Positives = 408/749 (54%), Gaps = 62/749 (8%)

Query: 3   SRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS 61
           S+ ++++ L+D+GS D V M+GI G+GGLGK+T+AR +Y+ I+ +FE   FL +VRE S+
Sbjct: 201 SQVQQVKLLLDNGSDDGVHMVGIYGIGGLGKSTLARAIYNFIADQFEGLCFLHDVRENSA 260

Query: 62  KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAG 121
              L  LQ +LL +   L +  + +V +GI ++  RL RKK+LL++DDV D+KQL +LAG
Sbjct: 261 ISNLKHLQEKLLLKTTGL-EIKLDHVSEGIPIIKERLCRKKILLILDDVNDIKQLHALAG 319

Query: 122 NREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQ 181
             +WFG GSR+++T+RD+ LL  HG++  ++  GL   EAL+L +  AFK         +
Sbjct: 320 GLDWFGYGSRVVVTTRDKQLLTCHGIESTHEVEGLYGTEALELLSWMAFKNDPVPSIYNE 379

Query: 182 LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQEL 241
           +  R + YA GLPL LE++GS L G+S++EW+ TL+  +  P  EI  IL++S+DGL+E 
Sbjct: 380 ILIRAVAYASGLPLVLEIVGSNLFGKSIEEWKGTLDGYDKIPNKEIQKILKVSYDGLEEE 439

Query: 242 EKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVI-GIRVLIEKCLITVHNNTLWMHDLLQE 300
           E+ +FLDIAC FKG + +   + L     H +   + VL EK LI  + + + +HD++++
Sbjct: 440 EQSVFLDIACCFKGYEWEDAKHILHSHYGHCITHHLGVLAEKSLIDQYYSHVTLHDMIED 499

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G+++V+++SP+E G+RSRLW ++++ HVL ++TGT  VE I ++   H  E  +    K
Sbjct: 500 MGKEVVRQESPKEPGERSRLWCQDDIVHVLNKNTGTSKVEMIYMN--FHSMEPVIDQKGK 557

Query: 361 AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
           AF KMTNL+ L I N     GL+YL + L++L W+G+  + L S            C+S 
Sbjct: 558 AFKKMTNLKTLVIENGHFSKGLKYLRSSLKVLKWKGFTSESLSS------------CFSN 605

Query: 421 IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
                   K    + V+IL H E L  + D +G PNL+KL  + C  L  IH S+    K
Sbjct: 606 --------KKFQDMNVLILDHCEYLTHISDVSGLPNLKKLSFKDCKNLITIHNSVGYLIK 657

Query: 481 LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
           L IL+   C  L + P                P  +  LK    +++SG      FP+++
Sbjct: 658 LEILDAMGCRKLKSFP----------------PLQLPSLK---EMELSGCWSLNSFPKLL 698

Query: 541 EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL-------EILPVTVSNLKCL 593
             M ++  + L  T+IR LP S + LSGL  L+L+  R +       ++  +  SN+K L
Sbjct: 699 CKMTNIENILLYETSIRELPSSFQNLSGLSRLSLEG-RGMRFPKHNGKMYSIVFSNVKAL 757

Query: 594 RSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVR 653
            SL  +  S  +  P +++   ++  L L  +  K +P  +     L  +N+S CK L  
Sbjct: 758 -SLVNNNLSD-ECLPILLKWCVNVIYLNLMKSKFKTLPECLSECHHLVKINVSYCKYLEE 815

Query: 654 LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHST----SWYSYIP 709
           +        +LK L    C  L +  + +   + L E   +    P+ T     W+ +  
Sbjct: 816 IRG---IPPNLKELFAYECNSLSSSSKRMLLSQKLHEARCTYLYFPNGTEGIPDWFEHQS 872

Query: 710 I-NLMRKSVALKLPSLSGLCSLRKLNLTD 737
             N +      K+PS++ +  L K N  D
Sbjct: 873 KGNTISFWFRKKIPSVTFIIILPKDNWVD 901



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 153/346 (44%), Gaps = 60/346 (17%)

Query: 566 LSGLVLLNLKNCRSLEILPVTVSNLKC--LRSLKLSGCSKLKKFP----------EIVRS 613
           L  LV+ N    + L+ L  ++  LK     S  LS C   KKF           E +  
Sbjct: 565 LKTLVIENGHFSKGLKYLRSSLKVLKWKGFTSESLSSCFSNKKFQDMNVLILDHCEYLTH 624

Query: 614 MKDLSEL-------FLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKT 666
           + D+S L       F D  ++  + +S+  L KLE+L+   C+ L   P   + L SLK 
Sbjct: 625 ISDVSGLPNLKKLSFKDCKNLITIHNSVGYLIKLEILDAMGCRKLKSFPP--LQLPSLKE 682

Query: 667 LNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSV---ALKLPS 723
           + LSGC+ L + P+ L ++ ++E + +  T++    S +  +   L R S+    ++ P 
Sbjct: 683 MELSGCWSLNSFPKLLCKMTNIENILLYETSIRELPSSFQNLS-GLSRLSLEGRGMRFPK 741

Query: 724 LSG------LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSK 777
            +G        +++ L+L + NL +  LP  +    ++  L L K+ F +LP  ++    
Sbjct: 742 HNGKMYSIVFSNVKALSLVNNNLSDECLPILLKWCVNVIYLNLMKSKFKTLPECLSECHH 801

Query: 778 LLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLG 837
           L+ I +  CK L+ +  +PPN++++    C SL +         S   M           
Sbjct: 802 LVKINVSYCKYLEEIRGIPPNLKELFAYECNSLSS---------SSKRM----------- 841

Query: 838 NKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSIT 883
                  +L + L     T  +      G  IP+WF +Q++G++I+
Sbjct: 842 -------LLSQKLHEARCTYLYFPNGTEG--IPDWFEHQSKGNTIS 878


>gi|358248980|ref|NP_001239717.1| TMV resistance protein N-like [Glycine max]
 gi|223452611|gb|ACM89632.1| candidate disease-resistance protein [Glycine max]
          Length = 1029

 Score =  364 bits (934), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 240/605 (39%), Positives = 340/605 (56%), Gaps = 37/605 (6%)

Query: 11  LMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQ 69
           L+D GS D V +IGI GMGGLGKTT+A  VY+ I+  F+ S FL NVRE S+K GL   Q
Sbjct: 201 LLDVGSDDLVHIIGIHGMGGLGKTTLALAVYNFIALHFDESCFLQNVREESNKHGLKHFQ 260

Query: 70  RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG 129
             LLS+LL   D ++ +  +G  M+  RL+RKKVLL++DDV   +QL+++ G  +WFG G
Sbjct: 261 SILLSKLLGEKDITLTSWQEGASMIQHRLRRKKVLLILDDVDKREQLEAIVGRSDWFGPG 320

Query: 130 SRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ--PLQECVQLSARII 187
           SR+IIT+RD+HLLK H V+  Y+   LN++ ALQL    AFK  +  P+ + V    R++
Sbjct: 321 SRVIITTRDKHLLKYHEVERTYEVKVLNHNAALQLLTWNAFKREKIDPIYDDVL--NRVV 378

Query: 188 RYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFL 247
            YA GLPLALEV+GS L G++V EW S +E  +  P  EIL IL++SFD L E +K +FL
Sbjct: 379 TYASGLPLALEVIGSDLFGKTVAEWESAVEHYKRIPSDEILKILKVSFDALGEEQKNVFL 438

Query: 248 DIACFFKGND----RDYVTNFLEGCGFHPVIGIRVLIEKCLITVH---NNTLWMHDLLQE 300
           DIAC FKG       D +  F   C  H    I VL+EK LI ++   + T+ MHDL+Q+
Sbjct: 439 DIACCFKGYKWTEVDDILRAFYGNCKKH---HIGVLVEKSLIKLNCYDSGTVEMHDLIQD 495

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G++I +++SPEE  K  RLW  +++  VL  +TGT  +E I LD    + E  +  +  
Sbjct: 496 MGREIERQRSPEEPWKCKRLWSPKDIFQVLKHNTGTSKIEIICLDFSISDKEETVEWNEN 555

Query: 361 AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
           AF KM NL++L I N +   G  Y    L +L W  YP   LP N   +  +   +  S 
Sbjct: 556 AFMKMENLKILIIRNGKFSKGPNYFPEGLTVLEWHRYPSNCLPYNFHPNNLLICKLPDSS 615

Query: 421 IG--ELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           I   EL    K    L V+     E L ++PD +  PNL++L  + C  L  +  S+   
Sbjct: 616 ITSFELHGPSKKFWHLTVLNFDQCEFLTQIPDVSDLPNLKELSFDWCESLIAVDDSIGFL 675

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
           NKL  L+   C  L + P          LNL S          L TL +SG      FPE
Sbjct: 676 NKLKKLSAYGCRKLRSFP---------PLNLTS----------LETLQLSGCSSLEYFPE 716

Query: 539 IVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKL 598
           I+  ME++  L L+G  I+ LP S + L GL  L L +C  ++ LP +++ +  L   ++
Sbjct: 717 ILGEMENIKALDLDGLPIKELPFSFQNLIGLCRLTLNSCGIIQ-LPCSLAMMPELSVFRI 775

Query: 599 SGCSK 603
             C++
Sbjct: 776 ENCNR 780



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 72/137 (52%), Gaps = 5/137 (3%)

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
           SI  L+ L  L+   CR L   P    NL  L +L+LSGCS L+ FPEI+  M+++  L 
Sbjct: 671 SIGFLNKLKKLSAYGCRKLRSFPPL--NLTSLETLQLSGCSSLEYFPEILGEMENIKALD 728

Query: 622 LDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPET 681
           LDG  IKE+P S + L  L  L L+ C  +++LP S+  +  L    +  C +   V   
Sbjct: 729 LDGLPIKELPFSFQNLIGLCRLTLNSC-GIIQLPCSLAMMPELSVFRIENCNRWHWVESE 787

Query: 682 LG--QIESLEELDISGT 696
            G  +   +E LD+SG 
Sbjct: 788 EGSKRFTRVEYLDLSGN 804



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 124/319 (38%), Gaps = 91/319 (28%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
           L  L    C  L + P+ V  + +L EL  D   S+  V  SI  L KL+ L+   C+ L
Sbjct: 631 LTVLNFDQCEFLTQIPD-VSDLPNLKELSFDWCESLIAVDDSIGFLNKLKKLSAYGCRKL 689

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPIN 711
              P   + L SL+TL LSGC  LE  PE LG++E+++ LD+ G            +PI 
Sbjct: 690 RSFPP--LNLTSLETLQLSGCSSLEYFPEILGEMENIKALDLDG------------LPI- 734

Query: 712 LMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTS 771
              K +     +L GLC   +L L  C +++                         LP S
Sbjct: 735 ---KELPFSFQNLIGLC---RLTLNSCGIIQ-------------------------LPCS 763

Query: 772 ITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLD 831
           +  + +L    +E+C R   +     + R  RV                          +
Sbjct: 764 LAMMPELSVFRIENCNRWHWVESEEGSKRFTRV--------------------------E 797

Query: 832 SLKLLGNKSLAFSMLREYLEAVSNTRQHL--------SVVVPGSEIPEWFMYQNEGSSIT 883
            L L GN    F++L E+ + +   R  +        + +  G+ IPEW   Q+ G S  
Sbjct: 798 YLDLSGNN---FTILPEFFKELQFLRALMKLHEAGGTNFMFTGTRIPEWLDQQSSGHS-- 852

Query: 884 VTRPSNLYNKKKLVGYAIC 902
               S+ + + K     +C
Sbjct: 853 ----SSFWFRNKFPAKLLC 867


>gi|227438273|gb|ACP30626.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1276

 Score =  364 bits (934), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 220/584 (37%), Positives = 329/584 (56%), Gaps = 36/584 (6%)

Query: 21  MIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLA 80
           ++G+ GM G+GKT I R ++   +  ++   FL +   +    GL  L+ +  S++    
Sbjct: 333 IVGLWGMAGIGKTAITREIFRRQAERYDVCYFLPDFHIVCQTRGLSHLRDEFFSRISGEE 392

Query: 81  DNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEH 140
             +I      +  +  R   KKVL+V+D V   +  + L G   WF  G  +I+TSR+  
Sbjct: 393 KVTIDACDTKLGFIRDRFLSKKVLVVLDGVSSARDAEFLVGGFGWFSGGHTLILTSRNRQ 452

Query: 141 LLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVL 200
           +L      E+Y+   L+  E+LQL +   F T Q  +    L + ++ YA G+PLAL  L
Sbjct: 453 VLVQCNAKEIYEIQKLSERESLQLCSQ--FATEQNWKGSTSLVSELVNYASGIPLALCAL 510

Query: 201 GSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDY 260
           GS L  + + + +  L+RL   P  EI D  + SF+ L   EK  FLD+ACFF+G ++DY
Sbjct: 511 GSSLQNQCIKDEKQHLKRLRQNPLVEIQDAFKRSFNVLDGNEKNTFLDLACFFRGENKDY 570

Query: 261 VTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRL 320
           V N L+GCGF   +GI  LI++ LI++ +N + M ++ Q+ G+ +V ++S  E GKRSRL
Sbjct: 571 VVNILDGCGFLTELGIYGLIDESLISIVDNKIEMLNIFQDTGRFVVCQES-SETGKRSRL 629

Query: 321 WKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI------- 373
           W   ++  VLT ++GTE +EGI LD+     E+    S   F K+  LR LK+       
Sbjct: 630 WDPSDIVDVLTNNSGTEAIEGIFLDSTGLTVEL----SPTVFEKIYRLRFLKLYSPTSKN 685

Query: 374 -CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLD 432
            CN+ LP GL  L + LRLL W   PL+ LP        +E+ M YS + +LWKG K+L+
Sbjct: 686 HCNVSLPQGLYSLPDELRLLHWERCPLESLPRKFNPKNIVELNMPYSNMTKLWKGTKNLE 745

Query: 433 KLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSL 492
            LK +ILSHS  LI+ P  + A NLE + LEGCT L +++ S+L H+KLI L++KDC+ L
Sbjct: 746 NLKRIILSHSRRLIKFPRLSKARNLEHIDLEGCTSLVKVNSSILHHHKLIFLSLKDCSHL 805

Query: 493 ITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLE 552
            T+P  + +++LE LNL                  SG L+  +FP+      +L EL+L 
Sbjct: 806 QTMPTTVHLEALEVLNL------------------SGCLELEDFPDF---SPNLKELYLA 844

Query: 553 GTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
           GTAIR +P SI  LS LV L+L+NC  L+ LP  + NLK + +L
Sbjct: 845 GTAIREMPSSIGGLSKLVTLDLENCDRLQHLPPEIRNLKVVVTL 888



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 113/198 (57%), Gaps = 12/198 (6%)

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNL--KSLPTTISGLKCLSTLD---VSGDL 531
           L ++L +L+ + C  L +LP K   K++ +LN+   ++     G K L  L    +S   
Sbjct: 698 LPDELRLLHWERC-PLESLPRKFNPKNIVELNMPYSNMTKLWKGTKNLENLKRIILSHSR 756

Query: 532 KFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
           +  +FP + +   +L  + LEG T++  +  SI     L+ L+LK+C  L+ +P TV +L
Sbjct: 757 RLIKFPRLSK-ARNLEHIDLEGCTSLVKVNSSILHHHKLIFLSLKDCSHLQTMPTTV-HL 814

Query: 591 KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKN 650
           + L  L LSGC +L+ FP+   ++K   EL+L GT+I+E+PSSI  L+KL  L+L +C  
Sbjct: 815 EALEVLNLSGCLELEDFPDFSPNLK---ELYLAGTAIREMPSSIGGLSKLVTLDLENCDR 871

Query: 651 LVRLPSSIIALKSLKTLN 668
           L  LP  I  LK + TL+
Sbjct: 872 LQHLPPEIRNLKVVVTLS 889



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 13/160 (8%)

Query: 650 NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG-TAVPHSTS----W 704
           N+ +L      L++LK + LS   +L   P  L +  +LE +D+ G T++    S     
Sbjct: 733 NMTKLWKGTKNLENLKRIILSHSRRLIKFPR-LSKARNLEHIDLEGCTSLVKVNSSILHH 791

Query: 705 YSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNS 764
           +  I ++L   S    +P+   L +L  LNL+ C  +E   P    NL   KELYL+  +
Sbjct: 792 HKLIFLSLKDCSHLQTMPTTVHLEALEVLNLSGCLELED-FPDFSPNL---KELYLAGTA 847

Query: 765 FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRV 804
              +P+SI  LSKL+ ++LE+C RLQ    LPP IR ++V
Sbjct: 848 IREMPSSIGGLSKLVTLDLENCDRLQ---HLPPEIRNLKV 884


>gi|15237409|ref|NP_199438.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177707|dbj|BAB11081.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007977|gb|AED95360.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1205

 Score =  364 bits (934), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 255/725 (35%), Positives = 374/725 (51%), Gaps = 83/725 (11%)

Query: 11  LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLD-----NVREISSKGG- 64
           L+D  S +V+M+GI G  G+GKTTIAR +++ +   F+   F+D       REI S    
Sbjct: 195 LLDLESKEVKMVGIWGSSGIGKTTIARALFNNLFRHFQVRKFIDRSFAYKSREIHSSANP 254

Query: 65  -----LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
                 + LQ   LS++L++ +  I    D + +LG RLQ +KVL++IDDV D   L SL
Sbjct: 255 DDHNMKLHLQESFLSEILRMPNIKI----DHLGVLGERLQHQKVLIIIDDVDDQVILDSL 310

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G  +WFG+GSRII+ + ++H L  HG+D +Y+      + AL +    AFK   P +  
Sbjct: 311 VGKTQWFGNGSRIIVVTNNKHFLTAHGIDRMYEVSLPTEEHALAMLCQSAFKKKSPPEGF 370

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             L  ++ RYAG LPL L+VLGS+LSG+  + W   L RL+     +I  IL+IS+DGL+
Sbjct: 371 EMLVVQVARYAGSLPLVLKVLGSYLSGKDKEYWIDMLPRLQNGLNDKIERILRISYDGLE 430

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
             ++ IF  IAC F   +   + + L    +   +G++ L++K +I V    + MH LLQ
Sbjct: 431 SEDQAIFRHIACIFNHMEVTTIKSLLANSIYGANVGLQNLVDKSIIHVRWGHVEMHPLLQ 490

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G++IV+ QS  +  KR  L    ++C VL+E   T+ V GI L+    +    LC   
Sbjct: 491 EMGRKIVRTQSIGKPRKREFLVDPNDICDVLSEGIDTQKVLGISLETSKIDE---LCVHE 547

Query: 360 KAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
            AF +M NLR LKI          L LP   +YL   L+LL W  +P++ +PSN      
Sbjct: 548 SAFKRMRNLRFLKIGTDIFGEENRLHLPESFDYLPPTLKLLCWSEFPMRCMPSNFCPKNL 607

Query: 412 IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
           + + M  S++ +LW+G   L  LK M L  S NL  +PD + A NLE L  E C  L E+
Sbjct: 608 VTLKMTNSKLHKLWEGAVPLTCLKEMDLDGSVNLKEIPDLSMATNLETLNFENCKSLVEL 667

Query: 472 HPSLLLH-NKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLP---TTISGLKC 521
            PS + + NKL+ LNM  C SL TLP    +KSL +++      L++ P   T IS L  
Sbjct: 668 -PSFIQNLNKLLKLNMAFCNSLETLPTGFNLKSLNRIDFTKCSKLRTFPDFSTNISDLYL 726

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRG----------------------- 558
             T          E P  + H+E+L +L +    I G                       
Sbjct: 727 TGT-------NIEELPSNL-HLENLIDLRISKKEIDGKQWEGVMKPLKPLLAMLSPTLTS 778

Query: 559 -----------LPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKF 607
                      LP S + L  L +L++ NCR+LE LP  + NL+ L SL   GCS+L+ F
Sbjct: 779 LQLQNIPNLVELPCSFQNLIQLEVLDITNCRNLETLPTGI-NLQSLDSLSFKGCSRLRSF 837

Query: 608 PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL 667
           PEI     ++S L L+ T I+EVP  I+  + L LL++  C  L  +   I  LK L  +
Sbjct: 838 PEIS---TNISSLNLEETGIEEVPWWIDKFSNLGLLSMDRCSRLKCVSLHISKLKRLGKV 894

Query: 668 NLSGC 672
           +   C
Sbjct: 895 DFKDC 899



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 121/245 (49%), Gaps = 41/245 (16%)

Query: 591 KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCK 649
           K L +LK++  SKL K  E    +  L E+ LDG+ ++KE+P  + + T LE LN  +CK
Sbjct: 605 KNLVTLKMTN-SKLHKLWEGAVPLTCLKEMDLDGSVNLKEIPD-LSMATNLETLNFENCK 662

Query: 650 NLVRLPSSIIALKSLKTLNLSGCFKLENVP-----ETLGQIE---------------SLE 689
           +LV LPS I  L  L  LN++ C  LE +P     ++L +I+               ++ 
Sbjct: 663 SLVELPSFIQNLNKLLKLNMAFCNSLETLPTGFNLKSLNRIDFTKCSKLRTFPDFSTNIS 722

Query: 690 ELDISGTAV---PHSTSWYSYIPINLMRKSVALK-----LPSLSGLCSLRKLNLTDC--- 738
           +L ++GT +   P +    + I + + +K +  K     +  L  L ++    LT     
Sbjct: 723 DLYLTGTNIEELPSNLHLENLIDLRISKKEIDGKQWEGVMKPLKPLLAMLSPTLTSLQLQ 782

Query: 739 ---NLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ 794
              NL+E  LP    NL  L+ L ++   +  +LPT I +L  L ++  + C RL+S P+
Sbjct: 783 NIPNLVE--LPCSFQNLIQLEVLDITNCRNLETLPTGI-NLQSLDSLSFKGCSRLRSFPE 839

Query: 795 LPPNI 799
           +  NI
Sbjct: 840 ISTNI 844



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 88/373 (23%), Positives = 151/373 (40%), Gaps = 64/373 (17%)

Query: 568 GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSI 627
            LV L + N +  ++    V  L CL+ + L G   LK+ P++  +    +  F +  S+
Sbjct: 606 NLVTLKMTNSKLHKLWEGAVP-LTCLKEMDLDGSVNLKEIPDLSMATNLETLNFENCKSL 664

Query: 628 KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
            E+PS I+ L KL  LN++ C +L  LP+    LKSL  ++ + C KL   P+    I  
Sbjct: 665 VELPSFIQNLNKLLKLNMAFCNSLETLPTGF-NLKSLNRIDFTKCSKLRTFPDFSTNISD 723

Query: 688 LEELDISGTAVPHSTSWYSYIPINLMRKSVALK-----LPSLSGLCSLRKLNLTDC---- 738
           L     +   +P +    + I + + +K +  K     +  L  L ++    LT      
Sbjct: 724 LYLTGTNIEELPSNLHLENLIDLRISKKEIDGKQWEGVMKPLKPLLAMLSPTLTSLQLQN 783

Query: 739 --NLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQL 795
             NL+E  LP    NL  L+ L ++   +  +LPT I +L  L ++  + C RL+S P++
Sbjct: 784 IPNLVE--LPCSFQNLIQLEVLDITNCRNLETLPTGI-NLQSLDSLSFKGCSRLRSFPEI 840

Query: 796 PPNIRQVRV--NGCASLVTLLDALK----LCKSDSTMIAC----LDSLKLLGNKS----- 840
             NI  + +   G   +   +D       L     + + C    +  LK LG        
Sbjct: 841 STNISSLNLEETGIEEVPWWIDKFSNLGLLSMDRCSRLKCVSLHISKLKRLGKVDFKDCG 900

Query: 841 -----------LAFSMLREYLEAVSNTRQHLS--------------------VVVPGSE- 868
                      +   M    ++ VS  +                        ++ PG E 
Sbjct: 901 ALTIVDLCGCPIGMEMEANNIDTVSKVKLDFRDCFNLDPETVLHQESIIFKYMLFPGKEE 960

Query: 869 IPEWFMYQNEGSS 881
           +P +F Y+  GSS
Sbjct: 961 MPSYFTYRTTGSS 973


>gi|280967725|gb|ACZ98531.1| ARGH17 [Malus x domestica]
          Length = 1056

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 260/702 (37%), Positives = 382/702 (54%), Gaps = 70/702 (9%)

Query: 1   MDSRCEKL-RFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +DSR + +  +L   GS+DVRM+GI GMGG+GKTT+A+ +Y+ I   F+   FL +VR+ 
Sbjct: 211 IDSRIQDIITYLSSGGSNDVRMVGIWGMGGVGKTTVAKAIYNQIHPMFQFKSFLADVRDA 270

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           +SK GLV LQ +L+S +LK     I  V +GI M+  + + K+VL+++D++ +V+QL ++
Sbjct: 271 TSKHGLVDLQNKLISDILK-KKPEISCVDEGIVMIKQQFRHKRVLVIMDNIDEVEQLDAI 329

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            GN +WFG GSRII+T+RDEHLLK   V  +Y     N  EAL+LF+  AF    P +  
Sbjct: 330 VGNHDWFGPGSRIILTTRDEHLLKRGKVHNIYPAQKFNEGEALELFSWHAFGNGCPNKGY 389

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            +LS ++                FL  R++ EW+S LE+LE  P  +I+  L+ISFDGL 
Sbjct: 390 HELSKKV----------------FLLWRTMAEWKSQLEKLERTPDGKIITPLRISFDGLD 433

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           + +K IFLDI+CFF G D+D V   L+ CGF   I I +L E+CL+TV +  L +HDLL+
Sbjct: 434 DKQKAIFLDISCFFIGMDKDNVAKALDVCGFSATIEISILRERCLVTVEDKKLNVHDLLR 493

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDN-YHHENEVYLCAS 358
           E+ + I+  +SP    K SRLW  +EV  VL   +GTE VEG+ L   + H+N  +   +
Sbjct: 494 EMAKVIISEKSPGHPEKWSRLWNHQEVVDVLRNKSGTEEVEGLALHKPFSHDNSSF---N 550

Query: 359 AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSN-LQMDKTIEIYMC 417
            +AF+ M  LRLL +  ++L    ++L   L  L W    LK +P +     + + + M 
Sbjct: 551 TEAFANMKKLRLLLLYKVELNGEYKHLPKELMWLRWEECLLKSIPDDFFNQPRLVVLEMQ 610

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
            S + ++W+G K L  LK++ L+ S +LI+ PDF+  PNLE+LILEGC  L         
Sbjct: 611 RSYLVQVWEGSKSLQNLKIIDLTRSYSLIKSPDFSQVPNLEELILEGCESL--------- 661

Query: 478 HNKLIILNMKDCTSLITLPGKILM-KSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
                      C  L +LP      KS+E L             CL+  D S   +FRE 
Sbjct: 662 ----------GCRMLTSLPRDFYKSKSVETL-------------CLN--DCS---EFREV 693

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNC---RSLEILPVTVSNL-KC 592
            E +  M  L  L  + TAIR +P SI  L  L  L+L N    R   ++ V   +L   
Sbjct: 694 HEDLGEMISLRILEADFTAIRQIPTSIVRLKNLTRLSLINPIFRRGSSLIGVEGIHLPNS 753

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV 652
           LR L LS C       + + S+  L  L L       +P S+  L+KLE L LS C  L 
Sbjct: 754 LRELSLSVCKLDDDAIKNLGSLISLQYLDLGWNKFHTLP-SLSGLSKLETLQLSGCMYLH 812

Query: 653 RLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
            +P     L +LK L++  C  LE +P    ++ ++ +L +S
Sbjct: 813 TIPD---LLTNLKVLHVDECPALETMP-NFSEMSNIRQLHVS 850



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 142/291 (48%), Gaps = 44/291 (15%)

Query: 629 EVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
           +VP+  EL+  LE      C+ L  LP      KS++TL L+ C +   V E LG++ SL
Sbjct: 646 QVPNLEELI--LEGCESLGCRMLTSLPRDFYKSKSVETLCLNDCSEFREVHEDLGEMISL 703

Query: 689 EELDISGTAVPHSTSWYSYIPINLMRKSVALKL----------PSLSGL------CSLRK 732
             L+   TA+         IP +++R     +L           SL G+       SLR+
Sbjct: 704 RILEADFTAIRQ-------IPTSIVRLKNLTRLSLINPIFRRGSSLIGVEGIHLPNSLRE 756

Query: 733 LNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSL 792
           L+L+ C L + A+  ++G+L SL+ L L  N F +LP S++ LSKL  ++L  C  L ++
Sbjct: 757 LSLSVCKLDDDAI-KNLGSLISLQYLDLGWNKFHTLP-SLSGLSKLETLQLSGCMYLHTI 814

Query: 793 PQLPPNIRQVRVNGCASLVTLLDALKLCK------SDSTMIACLDSLKLLGNKSLAFSML 846
           P L  N++ + V+ C +L T+ +  ++        S S  +  + SL    N S+ +  +
Sbjct: 815 PDLLTNLKVLHVDECPALETMPNFSEMSNIRQLHVSHSPKLTEVPSLDKSLN-SMIWIDM 873

Query: 847 REYLEAVSNTRQHL----------SVVVPGSEIPEWFMYQNEGSSITVTRP 887
            E     ++ R+++           + + G+ +P+WF + NEG+ ++   P
Sbjct: 874 HECTNLTADFRKNILQGWTSCGFGGIALHGNYVPDWFEFVNEGAKVSFDIP 924


>gi|357515237|ref|XP_003627907.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|357515241|ref|XP_003627909.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355521929|gb|AET02383.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355521931|gb|AET02385.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1110

 Score =  363 bits (932), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 294/910 (32%), Positives = 445/910 (48%), Gaps = 146/910 (16%)

Query: 15   GSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLS 74
            GS  ++++GI GMGG+GKTT+AR V++ IS +F+A  FL++VRE S+  GLV LQ+ LL+
Sbjct: 217  GSHGLKLLGIYGMGGIGKTTLARAVFNFISPQFDAFCFLEDVRENSANHGLVHLQQTLLA 276

Query: 75   QLL----KLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNR-EWFGSG 129
             L     K  D  + ++ +G+ +L + L RKKVLLV+DDV    QLQ+  G   + FG G
Sbjct: 277  TLAGQKKKKKDFQLASISEGLLLLKNMLHRKKVLLVLDDVNSSDQLQATLGRGLDTFGYG 336

Query: 130  SRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRY 189
            + IIIT+RD+H L THGV   YK   L  DE+L+L +  AFKT +   + + L  R+   
Sbjct: 337  TTIIITTRDKHFLTTHGVHTTYKVEELTKDESLELLSWNAFKTNKIYPDYIDLLNRVTTC 396

Query: 190  AGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDI 249
            A GLPLALEV+GS+L G+ V EW S L+  E  P  +I  IL+ +++ L    +++FLDI
Sbjct: 397  ASGLPLALEVIGSYLHGKGVKEWESALDSYEKIPSKDIQTILKQTYNALDGDLRQLFLDI 456

Query: 250  ACFFKG---NDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELGQQI 305
            ACFFKG   ++ +Y+ +   G  F P    R L+E  LI +  +N + MHDL++++ ++I
Sbjct: 457  ACFFKGYELSEVEYLLSAHHGYCFKPH-RFRFLLETSLIKIDEHNHVKMHDLIRDMAREI 515

Query: 306  VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKM 365
            V+++SP+  GKRSRLW   ++  VL ++TGT  ++ IVLD   +E  V      KAF KM
Sbjct: 516  VRQESPDHPGKRSRLWLTTDIVEVLEKNTGTSEIQTIVLDFPRYEKMVRW--DGKAFQKM 573

Query: 366  TNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIG--E 423
            T L+ L I +L    G + L N LR+L W GYP + LPS     K   + + +S     E
Sbjct: 574  TGLQTLIIRSLCFAEGPKNLPNSLRVLEWWGYPSQSLPSYFYPKKLAVLKLPHSSFMSLE 633

Query: 424  LWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLII 483
            L K  K ++ + ++     + +  +PD +GAPNLE+L L+ C  L EIH S+   +KL I
Sbjct: 634  LSKSKKFVN-MTLLNFDECKIITHIPDVSGAPNLERLSLDSCENLVEIHDSVGFLDKLEI 692

Query: 484  LNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHM 543
            LN+  C  L  LP  I + SL+ LNL    + +S                  FPEI+ +M
Sbjct: 693  LNLGSCAKLRNLP-PIHLTSLQHLNLSHCSSLVS------------------FPEILGNM 733

Query: 544  EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            ++++ L LE TAIR  P SI  L  L  L L  C +L +    +   + L  L +  C  
Sbjct: 734  KNITSLSLEYTAIREFPYSIGNLPRLKSLELHGCGNLLLPSSIILLSE-LEELSIWQCEG 792

Query: 604  LKKF-----PE----IVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRL 654
            LK +     PE     V S     E F    S   +   +   + +  LNLS       L
Sbjct: 793  LKSYKQDKGPEKVGSTVSSNVKYIEFFSCNISDDFIRIGLSWFSNVVELNLS-ANTFTVL 851

Query: 655  PSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMR 714
            P+ I   + L  L L  C +L  +      +E    +  +           S   ++L  
Sbjct: 852  PTCIKECRFLTILILDYCRQLREIRGIPPNLEIFSAIRCT-----------SLNDLDLTN 900

Query: 715  KSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITH 774
              V+ K+      C LR+L L DC                                    
Sbjct: 901  LLVSTKV-----CCPLRELVLDDC------------------------------------ 919

Query: 775  LSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLK 834
                        + LQ +  +PP+I  +    C SL                I+C   L 
Sbjct: 920  ------------ESLQEIRGIPPSIELLSARNCRSLT---------------ISCRRML- 951

Query: 835  LLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKK 894
                      +++E  EA +      S  +PG+++P+WF ++++G SI+       + + 
Sbjct: 952  ----------LIQELHEAGNK-----SFCLPGTQMPDWFEHRSKGHSIS------FWFRG 990

Query: 895  KLVGYAICCV 904
            K    ++C V
Sbjct: 991  KFPALSLCFV 1000


>gi|9758205|dbj|BAB08679.1| disease resistance protein; strong similarity to TMV resistance
            protein N [Arabidopsis thaliana]
          Length = 1239

 Score =  363 bits (932), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 294/918 (32%), Positives = 471/918 (51%), Gaps = 79/918 (8%)

Query: 16   SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL-VSLQRQLLS 74
            S + RM+GI G  G+GKTTIAR++Y  +S +F+   F    R      G+ +S + Q LS
Sbjct: 203  SEEARMVGILGPSGIGKTTIARILYSKLSSQFDYHVFGSFKRTNQDNYGMKLSWEEQFLS 262

Query: 75   QLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIII 134
            ++L   D  I      + ++  RL+ KKVL+V+DDV +++ L++L G   WFG GSRII+
Sbjct: 263  EILDQKDLKI----SQLGVVKQRLKHKKVLIVLDDVDNLELLKTLVGQTGWFGPGSRIIV 318

Query: 135  TSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLP 194
            T++D  LLK+H +D +Y+    +   AL++    AF    P    +QL+  +    G LP
Sbjct: 319  TTQDRILLKSHKIDHIYEVGYPSRKLALRILCRSAFDRNSPPDGFMQLANEVTELVGNLP 378

Query: 195  LALEVLGSFLSGRSVDEWRSTLERLEIE-PPSEILDILQISFDGLQELEKKIFLDIACFF 253
            LAL ++GS L GR  +EW   +  L       EIL  L++S+D L    ++IFL IAC  
Sbjct: 379  LALNIMGSSLKGRDKEEWIEMMPSLRNSLVDGEILKTLRVSYDRLHGNYQEIFLYIACLL 438

Query: 254  KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH--NNTLWMHDLLQELGQQIVQRQSP 311
                 +Y+ + L   G + +IG+++L EK LI +   + T+ MH LLQ+LG++IV+ +S 
Sbjct: 439  NCCGVEYIISML---GDNAIIGLKILAEKSLIHISPLDKTVEMHSLLQKLGRKIVRDESF 495

Query: 312  EELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLL 371
               GKR  L   E++C V T++TGTE V GI L+    E    L    K+F  M NL+ L
Sbjct: 496  GNPGKRRFLLDAEDICDVFTDNTGTETVLGISLNTL--EINGTLSVDDKSFQGMHNLQFL 553

Query: 372  KICN----------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRI 421
            K+            L LP GL  L  +LRLL W  +PL+ +PSN + +  + + M YS++
Sbjct: 554  KVFENWRRGSGEGILSLPQGLNSLPRKLRLLHWYKFPLRCMPSNFKAEYLVNLEMAYSQL 613

Query: 422  GELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKL 481
              LW+G + L  LK M LS SENL  +PD + A NLE++ L  C  L  +  S+   +KL
Sbjct: 614  ERLWEGTQQLGSLKKMDLSKSENLKEIPDLSYAVNLEEMDLCSCKSLVTLPSSVRNLDKL 673

Query: 482  IILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKFRE 535
             +L M  C+++  LP  + ++SL+ LN      L+S P  IS  + +S L++SG     E
Sbjct: 674  RVLRMSSCSNVEVLPTDLNLESLDLLNLEDCSQLRSFP-QIS--RNISILNLSGTAIDEE 730

Query: 536  FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
                +E+M  L+ L  +   ++ LP +      LV L++ + + LE L         L +
Sbjct: 731  SSLWIENMSRLTHLRWDFCPLKSLPSNFR-QEHLVSLHMTHSK-LEKLWEGAQPFGNLVN 788

Query: 596  LKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRL 654
            + LS   KLK+FP + + + +L  L L G  S+  VPSSI+ L+KL  LN+  C  L  L
Sbjct: 789  IDLSLSEKLKEFPNLSK-VTNLDTLDLYGCKSLVTVPSSIQSLSKLTELNMRRCTGLEAL 847

Query: 655  PSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWY-SYIPINLM 713
            P+  + L+SL TL+LSGC KL   P+    IE L    +  TA+    SW   +  +  +
Sbjct: 848  PTD-VNLESLHTLDLSGCSKLTTFPKISRNIERLL---LDDTAIEEVPSWIDDFFELTTL 903

Query: 714  RKSVALKLPSLS-GLCSLRKL---NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLP 769
                  +L ++S  +C L+ +   N +DC  +     ++  +   ++ +  + +  ++L 
Sbjct: 904  SMKGCKRLRNISTSICELKCIEVANFSDCERL-----TEFDDASMVRRILRTIDDLIALY 958

Query: 770  TSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIAC 829
               + L  +  +    C++L S+              CA +     AL      S     
Sbjct: 959  EEASFLHAIFVL----CRKLVSI--------------CAMVFKYPQAL------SYFFNS 994

Query: 830  LDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSN 889
             ++  +  N S   S+ R+  E +     H   V+PG ++P  FM Q  GSS+++    +
Sbjct: 995  PEADLIFANCS---SLDRD-AETLILESNHGCAVLPGGKVPNCFMNQACGSSVSIPLHES 1050

Query: 890  LYNKKKLVGYAICCVFHV 907
             Y+ ++ +G+  C V   
Sbjct: 1051 YYS-EEFLGFKACIVLET 1067


>gi|30696077|ref|NP_851172.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|110737797|dbj|BAF00837.1| hypothetical protein [Arabidopsis thaliana]
 gi|332008724|gb|AED96107.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1229

 Score =  363 bits (932), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 294/918 (32%), Positives = 471/918 (51%), Gaps = 79/918 (8%)

Query: 16   SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL-VSLQRQLLS 74
            S + RM+GI G  G+GKTTIAR++Y  +S +F+   F    R      G+ +S + Q LS
Sbjct: 203  SEEARMVGILGPSGIGKTTIARILYSKLSSQFDYHVFGSFKRTNQDNYGMKLSWEEQFLS 262

Query: 75   QLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIII 134
            ++L   D  I      + ++  RL+ KKVL+V+DDV +++ L++L G   WFG GSRII+
Sbjct: 263  EILDQKDLKI----SQLGVVKQRLKHKKVLIVLDDVDNLELLKTLVGQTGWFGPGSRIIV 318

Query: 135  TSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLP 194
            T++D  LLK+H +D +Y+    +   AL++    AF    P    +QL+  +    G LP
Sbjct: 319  TTQDRILLKSHKIDHIYEVGYPSRKLALRILCRSAFDRNSPPDGFMQLANEVTELVGNLP 378

Query: 195  LALEVLGSFLSGRSVDEWRSTLERLEIE-PPSEILDILQISFDGLQELEKKIFLDIACFF 253
            LAL ++GS L GR  +EW   +  L       EIL  L++S+D L    ++IFL IAC  
Sbjct: 379  LALNIMGSSLKGRDKEEWIEMMPSLRNSLVDGEILKTLRVSYDRLHGNYQEIFLYIACLL 438

Query: 254  KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH--NNTLWMHDLLQELGQQIVQRQSP 311
                 +Y+ + L   G + +IG+++L EK LI +   + T+ MH LLQ+LG++IV+ +S 
Sbjct: 439  NCCGVEYIISML---GDNAIIGLKILAEKSLIHISPLDKTVEMHSLLQKLGRKIVRDESF 495

Query: 312  EELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLL 371
               GKR  L   E++C V T++TGTE V GI L+    E    L    K+F  M NL+ L
Sbjct: 496  GNPGKRRFLLDAEDICDVFTDNTGTETVLGISLNTL--EINGTLSVDDKSFQGMHNLQFL 553

Query: 372  KICN----------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRI 421
            K+            L LP GL  L  +LRLL W  +PL+ +PSN + +  + + M YS++
Sbjct: 554  KVFENWRRGSGEGILSLPQGLNSLPRKLRLLHWYKFPLRCMPSNFKAEYLVNLEMAYSQL 613

Query: 422  GELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKL 481
              LW+G + L  LK M LS SENL  +PD + A NLE++ L  C  L  +  S+   +KL
Sbjct: 614  ERLWEGTQQLGSLKKMDLSKSENLKEIPDLSYAVNLEEMDLCSCKSLVTLPSSVRNLDKL 673

Query: 482  IILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKFRE 535
             +L M  C+++  LP  + ++SL+ LN      L+S P  IS  + +S L++SG     E
Sbjct: 674  RVLRMSSCSNVEVLPTDLNLESLDLLNLEDCSQLRSFP-QIS--RNISILNLSGTAIDEE 730

Query: 536  FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
                +E+M  L+ L  +   ++ LP +      LV L++ + + LE L         L +
Sbjct: 731  SSLWIENMSRLTHLRWDFCPLKSLPSNFR-QEHLVSLHMTHSK-LEKLWEGAQPFGNLVN 788

Query: 596  LKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRL 654
            + LS   KLK+FP + + + +L  L L G  S+  VPSSI+ L+KL  LN+  C  L  L
Sbjct: 789  IDLSLSEKLKEFPNLSK-VTNLDTLDLYGCKSLVTVPSSIQSLSKLTELNMRRCTGLEAL 847

Query: 655  PSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWY-SYIPINLM 713
            P+  + L+SL TL+LSGC KL   P+    IE L    +  TA+    SW   +  +  +
Sbjct: 848  PTD-VNLESLHTLDLSGCSKLTTFPKISRNIERLL---LDDTAIEEVPSWIDDFFELTTL 903

Query: 714  RKSVALKLPSLS-GLCSLRKL---NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLP 769
                  +L ++S  +C L+ +   N +DC  +     ++  +   ++ +  + +  ++L 
Sbjct: 904  SMKGCKRLRNISTSICELKCIEVANFSDCERL-----TEFDDASMVRRILRTIDDLIALY 958

Query: 770  TSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIAC 829
               + L  +  +    C++L S+              CA +     AL      S     
Sbjct: 959  EEASFLHAIFVL----CRKLVSI--------------CAMVFKYPQAL------SYFFNS 994

Query: 830  LDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSN 889
             ++  +  N S   S+ R+  E +     H   V+PG ++P  FM Q  GSS+++    +
Sbjct: 995  PEADLIFANCS---SLDRD-AETLILESNHGCAVLPGGKVPNCFMNQACGSSVSIPLHES 1050

Query: 890  LYNKKKLVGYAICCVFHV 907
             Y+ ++ +G+  C V   
Sbjct: 1051 YYS-EEFLGFKACIVLET 1067


>gi|356550897|ref|XP_003543819.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 970

 Score =  363 bits (931), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 236/602 (39%), Positives = 356/602 (59%), Gaps = 39/602 (6%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EK+  L+  GSS VR++GI GMGG+GKTT+A  +YD +S EFE   FL NVRE S K G 
Sbjct: 198 EKIESLLKIGSSKVRILGIWGMGGIGKTTLASALYDKLSPEFEGCCFLANVREESDKHGF 257

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGS-----RLQRKKVLLVIDDVVDVKQLQSLA 120
            +L+ +L S+LL+  +      FD    L S     RL RKKV +V+DDV   +QL++L 
Sbjct: 258 KALRNKLFSELLENENL----CFDASSFLVSHFVLSRLGRKKVFIVLDDVDTSEQLENLI 313

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            + ++ G GSR+I+T+R++ +     VD++YK   L+   +L+LF +  F+  QP     
Sbjct: 314 EDFDFLGLGSRVIVTTRNKQIFSQ--VDKIYKVKELSIHHSLKLFCLSVFREKQPKHGYE 371

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            LS   I Y  G+PLAL+VLG+ L  RS   W   L +L+  P  EI ++L++S+DGL  
Sbjct: 372 DLSRSAISYCKGIPLALKVLGASLRSRSKQAWECELRKLQKFPNMEIHNVLKLSYDGLDY 431

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWMHDLLQ 299
            +K+IFLDIACF +G  RD+VT+ LE   F    GI VL++K LIT+     + MHDL+Q
Sbjct: 432 SQKEIFLDIACFLRGKQRDHVTSILEAFDFPAASGIEVLLDKALITISGGIQIEMHDLIQ 491

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G +IV ++  ++ G+RSRLWK EEV  VL  + GTE+VEG++LD      ++YL  S 
Sbjct: 492 EMGWKIVHQEHIKDPGRRSRLWKHEEVHDVLKYNKGTEVVEGVILDLSKLTEDLYL--SF 549

Query: 360 KAFSKMTNLRLLK--------ICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
              +KMTN+R LK        I N+ LPNGL+ LS +LR L W G+ L+ LPS    ++ 
Sbjct: 550 DFLAKMTNVRFLKIHSWSKFTIFNVYLPNGLDSLSYKLRYLHWDGFCLESLPSRFCAEQL 609

Query: 412 IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
           +E+ M  S++ +LW G+++L  LK + L  S +L+ +PD + A  LE + L  C  L ++
Sbjct: 610 VELCMHCSKLKKLWDGVQNLVNLKTIDLWGSRDLVEIPDLSKAEKLESVSLCYCESLCQL 669

Query: 472 HPSLLLHNK-LIILNMKDCTSLITLPGKILMKSLEKLNLK-----SLPTTISGLKCLSTL 525
                +H+K L +LN+  C+SL      +  + L +LNL      +LP++I   + L +L
Sbjct: 670 Q----VHSKSLGVLNLYGCSSLREFL--VTSEELTELNLAFTAICALPSSIWQKRKLRSL 723

Query: 526 DVSG--DL-KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEI 582
            + G  +L K  + P      +H   +    + ++ LP++IE LS + ++ L +CR L  
Sbjct: 724 YLRGCHNLNKLSDEPRFCGSYKH--SITTLASNVKRLPVNIENLSMMTMIWLDDCRKLVS 781

Query: 583 LP 584
           LP
Sbjct: 782 LP 783



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 27/213 (12%)

Query: 601 CSKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSII 659
           CSKLKK  + V+++ +L  + L G+  + E+P  +    KLE ++L  C++L +L    +
Sbjct: 616 CSKLKKLWDGVQNLVNLKTIDLWGSRDLVEIPD-LSKAEKLESVSLCYCESLCQLQ---V 671

Query: 660 ALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVAL 719
             KSL  LNL GC  L    E L   E L EL+++ TA+         +P ++ +K   L
Sbjct: 672 HSKSLGVLNLYGCSSLR---EFLVTSEELTELNLAFTAI-------CALPSSIWQKR-KL 720

Query: 720 KLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLL 779
           +   L G  +L KL  +D     G+    I  L S         +   LP +I +LS + 
Sbjct: 721 RSLYLRGCHNLNKL--SDEPRFCGSYKHSITTLAS---------NVKRLPVNIENLSMMT 769

Query: 780 NIELEDCKRLQSLPQLPPNIRQVRVNGCASLVT 812
            I L+DC++L SLP+LP  + ++    C SL T
Sbjct: 770 MIWLDDCRKLVSLPELPLFLEKLSACNCTSLDT 802


>gi|30696080|ref|NP_199976.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332008725|gb|AED96108.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1175

 Score =  363 bits (931), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 294/918 (32%), Positives = 471/918 (51%), Gaps = 79/918 (8%)

Query: 16   SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL-VSLQRQLLS 74
            S + RM+GI G  G+GKTTIAR++Y  +S +F+   F    R      G+ +S + Q LS
Sbjct: 139  SEEARMVGILGPSGIGKTTIARILYSKLSSQFDYHVFGSFKRTNQDNYGMKLSWEEQFLS 198

Query: 75   QLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIII 134
            ++L   D  I      + ++  RL+ KKVL+V+DDV +++ L++L G   WFG GSRII+
Sbjct: 199  EILDQKDLKI----SQLGVVKQRLKHKKVLIVLDDVDNLELLKTLVGQTGWFGPGSRIIV 254

Query: 135  TSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLP 194
            T++D  LLK+H +D +Y+    +   AL++    AF    P    +QL+  +    G LP
Sbjct: 255  TTQDRILLKSHKIDHIYEVGYPSRKLALRILCRSAFDRNSPPDGFMQLANEVTELVGNLP 314

Query: 195  LALEVLGSFLSGRSVDEWRSTLERLEIE-PPSEILDILQISFDGLQELEKKIFLDIACFF 253
            LAL ++GS L GR  +EW   +  L       EIL  L++S+D L    ++IFL IAC  
Sbjct: 315  LALNIMGSSLKGRDKEEWIEMMPSLRNSLVDGEILKTLRVSYDRLHGNYQEIFLYIACLL 374

Query: 254  KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH--NNTLWMHDLLQELGQQIVQRQSP 311
                 +Y+ + L   G + +IG+++L EK LI +   + T+ MH LLQ+LG++IV+ +S 
Sbjct: 375  NCCGVEYIISML---GDNAIIGLKILAEKSLIHISPLDKTVEMHSLLQKLGRKIVRDESF 431

Query: 312  EELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLL 371
               GKR  L   E++C V T++TGTE V GI L+    E    L    K+F  M NL+ L
Sbjct: 432  GNPGKRRFLLDAEDICDVFTDNTGTETVLGISLNTL--EINGTLSVDDKSFQGMHNLQFL 489

Query: 372  KICN----------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRI 421
            K+            L LP GL  L  +LRLL W  +PL+ +PSN + +  + + M YS++
Sbjct: 490  KVFENWRRGSGEGILSLPQGLNSLPRKLRLLHWYKFPLRCMPSNFKAEYLVNLEMAYSQL 549

Query: 422  GELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKL 481
              LW+G + L  LK M LS SENL  +PD + A NLE++ L  C  L  +  S+   +KL
Sbjct: 550  ERLWEGTQQLGSLKKMDLSKSENLKEIPDLSYAVNLEEMDLCSCKSLVTLPSSVRNLDKL 609

Query: 482  IILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKFRE 535
             +L M  C+++  LP  + ++SL+ LN      L+S P  IS  + +S L++SG     E
Sbjct: 610  RVLRMSSCSNVEVLPTDLNLESLDLLNLEDCSQLRSFP-QIS--RNISILNLSGTAIDEE 666

Query: 536  FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
                +E+M  L+ L  +   ++ LP +      LV L++ + + LE L         L +
Sbjct: 667  SSLWIENMSRLTHLRWDFCPLKSLPSNFR-QEHLVSLHMTHSK-LEKLWEGAQPFGNLVN 724

Query: 596  LKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRL 654
            + LS   KLK+FP + + + +L  L L G  S+  VPSSI+ L+KL  LN+  C  L  L
Sbjct: 725  IDLSLSEKLKEFPNLSK-VTNLDTLDLYGCKSLVTVPSSIQSLSKLTELNMRRCTGLEAL 783

Query: 655  PSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWY-SYIPINLM 713
            P+  + L+SL TL+LSGC KL   P+    IE L    +  TA+    SW   +  +  +
Sbjct: 784  PTD-VNLESLHTLDLSGCSKLTTFPKISRNIERLL---LDDTAIEEVPSWIDDFFELTTL 839

Query: 714  RKSVALKLPSLS-GLCSLRKL---NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLP 769
                  +L ++S  +C L+ +   N +DC  +     ++  +   ++ +  + +  ++L 
Sbjct: 840  SMKGCKRLRNISTSICELKCIEVANFSDCERL-----TEFDDASMVRRILRTIDDLIALY 894

Query: 770  TSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIAC 829
               + L  +  +    C++L S+              CA +     AL      S     
Sbjct: 895  EEASFLHAIFVL----CRKLVSI--------------CAMVFKYPQAL------SYFFNS 930

Query: 830  LDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSN 889
             ++  +  N S   S+ R+  E +     H   V+PG ++P  FM Q  GSS+++    +
Sbjct: 931  PEADLIFANCS---SLDRD-AETLILESNHGCAVLPGGKVPNCFMNQACGSSVSIPLHES 986

Query: 890  LYNKKKLVGYAICCVFHV 907
             Y+ ++ +G+  C V   
Sbjct: 987  YYS-EEFLGFKACIVLET 1003


>gi|357499211|ref|XP_003619894.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494909|gb|AES76112.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1064

 Score =  362 bits (930), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 267/785 (34%), Positives = 407/785 (51%), Gaps = 92/785 (11%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + SR E+++ L+D GS D VRM+G+ G GG+GK+T+A+ VY+ ++ +FE   FL NVRE 
Sbjct: 189 LQSRIEEVKLLLDMGSEDEVRMVGLFGTGGMGKSTLAKAVYNFVADQFEGVCFLHNVREN 248

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           SS   L  LQ  LL + +KL ++ + +V +GI ++  RL RKK+LL++DDV  ++QL++L
Sbjct: 249 SSHNNLKHLQEDLLLRTVKL-NHKLGDVSEGISIIKERLSRKKILLILDDVDKLEQLEAL 307

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG GSR+IIT+RD+HLL  HG+   +    LN  EAL+L    AFK  +     
Sbjct: 308 AGGLDWFGHGSRVIITTRDKHLLACHGITSTHAVEELNETEALELLRRMAFKNDKVPSSY 367

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            ++  R++ YA GLPLA+  +G  L GR V++W  TL+  E  P  +I  ILQ+S+D L+
Sbjct: 368 EEILNRVVTYASGLPLAIVTIGGNLFGRKVEDWERTLDEYENIPDKDIQRILQVSYDALK 427

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPV-IGIRVLIEKCLIT--VHNNTLWMHD 296
           E ++ +FLDIAC FKG +   V   L     H +   + VL EK LI    ++  + +HD
Sbjct: 428 EKDQSVFLDIACCFKGCEWTKVKKILHAHYGHCIEHHVGVLAEKSLIGHWEYDTYVTLHD 487

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVL--DNYHHENEVY 354
           L++++G++IV+++SP + G+RSRLW  +++ +VL ++TGT  +E I L  D+   E E  
Sbjct: 488 LIEDMGKEIVRQESPNKPGERSRLWFPDDIVNVLRDNTGTGNIEMIYLEFDSTARETE-- 545

Query: 355 LCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
                 A  KMTNL+ L I       G  YL + LR   W   PLK L            
Sbjct: 546 --WDGMACKKMTNLKTLIIEYANFSRGPGYLPSSLRYWKWIFCPLKSLS----------- 592

Query: 415 YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
             C S         K  + +KV+ L++S  L  +PD +G PNLEK   + C  L  IH S
Sbjct: 593 --CISS--------KEFNYMKVLTLNYSRYLTHIPDVSGLPNLEKCSFQNCESLIRIHSS 642

Query: 475 LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFR 534
           +   NKL ILN   C+ L   P       L+ L+LK                     KF+
Sbjct: 643 IGHLNKLEILNASGCSKLEHFP------PLQLLSLK---------------------KFK 675

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
                + H E L ++ +          SI  L+ L +LN  NC  LE  P     L  L+
Sbjct: 676 -----ISHCESLKKITIHN--------SIGHLNKLEILNTSNCLKLEHFPPL--QLPSLK 720

Query: 595 SLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRL 654
             ++SGC  LK FPE++  M ++ ++ +  TSI+E+  S +  ++L+ L +S    L R 
Sbjct: 721 KFEISGCESLKNFPELLCKMTNIKDIEIYDTSIEELRYSFQNFSELQRLTISGGGKL-RF 779

Query: 655 PSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMR 714
           P      K   T+N      +E+V         L + ++S   +P    W+  +    + 
Sbjct: 780 P------KYNDTMNSIVFSNVEHV--------DLRDNNLSDECLPILLKWFVNVTFLDLS 825

Query: 715 KSVALKLPSLSGLCS-LRKLNLTDCNLMEG--ALPSDIGNLCSLKELYLSKNSFVSLPTS 771
           ++    LP   G C  L+ L L  C  +E    +P ++  LC+ +   LS +S   L + 
Sbjct: 826 ENYFTILPECLGECHRLKHLYLKFCEALEEIRGIPPNLERLCADECYSLSSSSIRMLMSQ 885

Query: 772 ITHLS 776
             H S
Sbjct: 886 KLHES 890



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 151/321 (47%), Gaps = 40/321 (12%)

Query: 573 NLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI-VRSMKDLSELFLDGTSIKEVP 631
           + +NC SL  +  ++ +L  L  L  SGCSKL+ FP + + S+K       +      + 
Sbjct: 629 SFQNCESLIRIHSSIGHLNKLEILNASGCSKLEHFPPLQLLSLKKFKISHCESLKKITIH 688

Query: 632 SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
           +SI  L KLE+LN S+C  L   P   + L SLK   +SGC  L+N PE L ++ +++++
Sbjct: 689 NSIGHLNKLEILNTSNCLKLEHFPP--LQLPSLKKFEISGCESLKNFPELLCKMTNIKDI 746

Query: 692 DISGTAVP---HSTSWYSYIPINLMRKSVALKLPSLSG------LCSLRKLNLTDCNLME 742
           +I  T++    +S   +S +    +     L+ P  +         ++  ++L D NL +
Sbjct: 747 EIYDTSIEELRYSFQNFSELQRLTISGGGKLRFPKYNDTMNSIVFSNVEHVDLRDNNLSD 806

Query: 743 GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
             LP  +    ++  L LS+N F  LP  +    +L ++ L+ C+ L+ +  +PPN+ ++
Sbjct: 807 ECLPILLKWFVNVTFLDLSENYFTILPECLGECHRLKHLYLKFCEALEEIRGIPPNLERL 866

Query: 803 RVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSV 862
             + C SL +                   S+++L ++ L  S    +    + TR+    
Sbjct: 867 CADECYSLSS------------------SSIRMLMSQKLHESAGCTHFRFPNKTRR---- 904

Query: 863 VVPGSEIPEWFMYQNEGSSIT 883
                 IP+WF +Q+ G  I 
Sbjct: 905 ------IPDWFEHQSRGGKIA 919


>gi|356570357|ref|XP_003553356.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1119

 Score =  362 bits (929), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 228/575 (39%), Positives = 340/575 (59%), Gaps = 29/575 (5%)

Query: 1   MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR ++++ L+D GS DV  M+GI G+GG+GKTT+A  +Y+ I+  FEA  FL+NVRE 
Sbjct: 199 LESRIQEVKMLLDVGSDDVVHMVGIHGLGGIGKTTLAAAIYNSIADHFEALCFLENVRET 258

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S   GL  LQR LLS+   + ++ +  V  GI ++  RLQ+KKVLL++DDV   +QLQ+L
Sbjct: 259 SKTHGLQYLQRNLLSE--TVGEDELIGVKQGISIIQHRLQQKKVLLILDDVDKREQLQAL 316

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G  + F  GSR+IIT+RD+ LL  HGV   Y+ + LN + ALQL + KAFK  + +  C
Sbjct: 317 VGRPDLFCPGSRVIITTRDKQLLACHGVKRTYEVNELNEEYALQLLSWKAFK-LEKVNPC 375

Query: 180 VQ-LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
            + +  R + Y+ GLPLALEV+GS LSGR++++WRSTL+R +  P  EI +IL++S+D L
Sbjct: 376 YKDVLNRTVTYSAGLPLALEVIGSNLSGRNIEQWRSTLDRYKRIPNKEIQEILKVSYDAL 435

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPV-IGIRVLIEKCLITVHNNTLWMHDL 297
           +E E+ +FLDI+C  K  D   V + L     H +   IRVL+EK LI + +  + +HDL
Sbjct: 436 EEDEQSVFLDISCCLKEYDLKEVQDILRAHYGHCMEHHIRVLLEKSLIKISDGYITLHDL 495

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           ++++G++IV+++SP E GKRSRLW   ++  VL E+ GT  +E I+  ++    EV +  
Sbjct: 496 IEDMGKEIVRKESPREPGKRSRLWLHTDIIQVLEENKGTSQIE-IICTDFSLFEEVEIEW 554

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
            A AF KM NL+ L I N     G ++L + LR+L W  YP +  PS+ +  K     + 
Sbjct: 555 DANAFKKMENLKTLIIKNGHFTKGPKHLPDTLRVLEWWRYPSQSFPSDFRPKKLAICKLP 614

Query: 418 YSRIGELWKGI---KHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
            S    L   +   K    L  +     ++L ++PD +  P LEKL  + C  L+ IH S
Sbjct: 615 NSGYTSLELAVLLKKKFVNLTNLNFDSCQHLTQIPDVSCVPKLEKLSFKDCDNLHAIHQS 674

Query: 475 LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFR 534
           + L  KL IL+ + C+ L   P  I + SLE+L L        G  C S           
Sbjct: 675 VGLLEKLRILDAEGCSRLKNFP-PIKLTSLEQLRL--------GF-CHS---------LE 715

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGL 569
            FPEI+  ME++  L+L+ T ++  PLS   L+ L
Sbjct: 716 SFPEILGKMENIIHLNLKQTPVKKFPLSFRNLTRL 750



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 152/374 (40%), Gaps = 87/374 (23%)

Query: 579 SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI--VRSMKDLSELFLDGTSIKEVPSSIEL 636
           SLE+  +       L +L    C  L + P++  V  ++ LS  F D  ++  +  S+ L
Sbjct: 620 SLELAVLLKKKFVNLTNLNFDSCQHLTQIPDVSCVPKLEKLS--FKDCDNLHAIHQSVGL 677

Query: 637 LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
           L KL +L+   C  L   P   I L SL+ L L  C  LE+ PE LG++E++  L++  T
Sbjct: 678 LEKLRILDAEGCSRLKNFPP--IKLTSLEQLRLGFCHSLESFPEILGKMENIIHLNLKQT 735

Query: 697 AV---PHS----TSWYSYIPINLMRKSVALKLPSLSGLCSLRK----------------- 732
            V   P S    T  ++        ++   K   +S +C++ K                 
Sbjct: 736 PVKKFPLSFRNLTRLHTLFVCFPRNQTNGWKDILVSSICTMPKGSRVIGVGWEGCEFSKE 795

Query: 733 -----------------LNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHL 775
                            L+L +CNL +   P  +    ++KEL LS N+F  +P  I   
Sbjct: 796 DEGAENVSLTTSSNVQFLDLRNCNLSDDFFPIALPCFANVKELDLSGNNFTVIPECIKEC 855

Query: 776 SKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKL 835
             L  + L  C+RL+ +  +PPN++      C SL +       C+S             
Sbjct: 856 RFLTVLCLNYCERLREIRGIPPNLKYFYAEECLSLTSS------CRS------------- 896

Query: 836 LGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKK 895
                    +L + L     T  +L    PG++IPEWF +Q      T   P + + + K
Sbjct: 897 --------MLLSQELHEAGRTFFYL----PGAKIPEWFDFQ------TSEFPISFWFRNK 938

Query: 896 LVGYAICCVFHVLK 909
               AIC   H++K
Sbjct: 939 FPAIAIC---HIIK 949


>gi|358346019|ref|XP_003637071.1| Resistance protein [Medicago truncatula]
 gi|355503006|gb|AES84209.1| Resistance protein [Medicago truncatula]
          Length = 1303

 Score =  362 bits (928), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 302/944 (31%), Positives = 463/944 (49%), Gaps = 131/944 (13%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +D + + +  L++ GS D V M+ I G+GG+GKTT+A  VY+LI+H+F+ S FL+NVRE 
Sbjct: 106 LDHQKQHVTSLLNFGSDDTVHMVAIHGIGGIGKTTLAISVYNLIAHQFDVSCFLENVREN 165

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
             K GL  LQ+ +LS++ +     +  V  GI +L  RL++KK+LL++DDV  ++QL++L
Sbjct: 166 HEKHGLPYLQKIILSKVAE-EKKELTGVLQGISILEQRLKQKKLLLILDDVNKLEQLEAL 224

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKT-YQPLQE 178
           AG  +WFG  SRIIIT+RD+ LL  HGV+  Y+  GLN  +AL+L   KAFK  + P   
Sbjct: 225 AGKHKWFGPSSRIIITTRDKKLLTCHGVERTYEVKGLNDKDALELVRWKAFKIEFGPSHN 284

Query: 179 CVQLSA-----RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
            +         R++ YA G PLALEV+GS    +++++ +  L+  E  P  +I   LQ+
Sbjct: 285 NLSFPQMHVLERVVAYASGHPLALEVMGSHFYNKTIEQCKVALDHYEKVPHKKIQTTLQL 344

Query: 234 SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITV-HNNT 291
           SFD L++ +K +FLDIAC FKG     V   L    G      I VL+EK LI +  +  
Sbjct: 345 SFDALEDKDKFVFLDIACCFKGWKLTRVEEILHAQYGNIMKDNINVLVEKSLIKISESGN 404

Query: 292 LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
           + MHDL++++G++IV+++SPE  GKRSRLW  E++ HVL E+TGT  +E I  D +    
Sbjct: 405 VTMHDLVEDMGKEIVRQESPENPGKRSRLWFSEDIMHVLEENTGTNQIEIIRFDCW---- 460

Query: 352 EVYLCASAKAFSKMTNLRLLKICN-LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK 410
              +    +AF KM NL+ L   + +      ++L N LR+L  R YP       L +  
Sbjct: 461 -TRVAWDGEAFKKMENLKTLIFSDYVFFKKHPKHLPNSLRVLECR-YPSSGFLVALSLFN 518

Query: 411 TIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYE 470
                             K    ++V+ L     L ++PD +G PNLEKL ++ C  L  
Sbjct: 519 F---------------PTKKFQNMRVLNLEDGNGLAQIPDISGLPNLEKLSIKNCWELIA 563

Query: 471 IHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGL-KCLS 523
           I  S+    KL IL  K C + I     +++ SLE+L+      L+     + G    L 
Sbjct: 564 IDKSVGFLGKLKIL--KICNTKIKSVPPLMLPSLEELDLSGCSILEGFSHEVDGFGDKLK 621

Query: 524 TLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEIL 583
           T+   G  K R  P                      PL    L+ L  L+  +C  LE  
Sbjct: 622 TMSFRGCRKLRSIP----------------------PLK---LNSLETLDFSSCHRLESF 656

Query: 584 PVTVSN-LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLD-GTSIKEVPSSI-ELLTKL 640
           P+ V+  L  L++L ++ C  LK  P +   +  L  L L    S++  P  + ELL KL
Sbjct: 657 PLVVNGFLGKLKTLLVTNCYNLKSIPPL--KLDSLEVLDLSCCCSLESFPCVVDELLDKL 714

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES-----LEELDISG 695
           + LN+  C  L  +P   + L SL+  NLS C+ L++ PE LG++ +     ++E  I  
Sbjct: 715 KFLNIECCIMLRNIPR--LRLTSLEHFNLSYCYSLKSFPEILGEMRNMPGVLMDETPIKE 772

Query: 696 TAVPHST---------SWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLT-----DCNLM 741
              P              Y Y+P N M       + +   + +++ L++       CNL 
Sbjct: 773 LPFPFKNLTQPKTLCECGYVYLP-NRMSTLAEFTIKNEEKVNTMQSLHVKYICVRRCNLS 831

Query: 742 EGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQ 801
           +  L   +    ++KEL+L+ N F  +P SI +   L  + L+DCK LQ +  +PP +R 
Sbjct: 832 DEYLSKSLMLFANVKELHLTSNHFTVIPKSIEYCKSLWKLVLDDCKALQEIKGIPPCLRM 891

Query: 802 VRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLS 861
           +    C SL +       CKS                      +L + L    NT   L 
Sbjct: 892 LSALNCISLTS------SCKS---------------------KLLNQELHEAGNTWFRL- 923

Query: 862 VVVPGSEIPEWFMYQNEGSSITVTRPS-NLYNKKKLVGYAICCV 904
              P +  PEWF +        + R S + + + K    A+C V
Sbjct: 924 ---PRATFPEWFDHH------CLARLSFSFWFRNKFPAIALCVV 958


>gi|27764537|gb|AAO23067.1| R 12 protein [Glycine max]
          Length = 893

 Score =  361 bits (927), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 241/598 (40%), Positives = 338/598 (56%), Gaps = 36/598 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++S+  ++  L+D GS DV  +IGI GMGGLGKTT+A  VY+ I+  F+ S FL NVRE 
Sbjct: 186 LESQVTEVMKLLDVGSDDVVHIIGIHGMGGLGKTTLAMAVYNFIAPHFDESCFLQNVREE 245

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  LLS+LL   D ++ +  +G  M+  RL+ KK+LL++DDV   +QL+++
Sbjct: 246 SNKHGLKHLQSVLLSKLLGEKDITLTSWQEGASMIQHRLRLKKILLILDDVDKREQLKAI 305

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G  +WFG GSR+IIT+RD+HLLK H V+  Y+ + LN+D+A QL    AFK  +     
Sbjct: 306 VGKPDWFGPGSRVIITTRDKHLLKYHEVERTYEVNVLNHDDAFQLLTWNAFKREKIDPSY 365

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R++ YA GLPLALEV+GS L G++V EW S LE  +  P +EIL IL++SFD L+
Sbjct: 366 KDVLNRVVTYASGLPLALEVIGSNLYGKTVAEWESALETYKRIPSNEILKILEVSFDALE 425

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG----CGFHPVIGIRVLIEKCLI--TVHNNTLW 293
           E +K +FLDIAC FKG     V +        C  H    I VL+EK L+      + + 
Sbjct: 426 EEQKNVFLDIACCFKGYKWTEVYDIFRALYSNCKMH---HIGVLVEKSLLLKVSWRDNVE 482

Query: 294 MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
           MHDL+Q++G+ I +++SPEE GK  RLW  +++  VL  +TGT  +E I LD+   + E 
Sbjct: 483 MHDLIQDMGRDIERQRSPEEPGKCKRLWSPKDIIQVLKHNTGTSKLEIICLDSSISDKEE 542

Query: 354 YLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
            +  +  AF KM NL++L I N +   G  Y    LR+L W  YP   LPSN      + 
Sbjct: 543 TVEWNENAFMKMENLKILIIRNGKFSKGPNYFPEGLRVLEWHRYPSNCLPSNFDPINLVI 602

Query: 414 IYMCYSRIGEL-WKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
             +  S I  L + G   L  L V+     + L ++PD +  PNL +L   GC  L  I 
Sbjct: 603 CKLPDSSITSLEFHGSSKLGHLTVLKFDKCKFLTQIPDVSDLPNLRELSFVGCESLVAID 662

Query: 473 PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
            S+   NKL ILN   C  L + P          LNL S          L TL++S    
Sbjct: 663 DSIGFLNKLEILNAAGCRKLTSFP---------PLNLTS----------LETLELSHCSS 703

Query: 533 FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCR------SLEILP 584
              FPEI+  ME+++ LHLE   I+ LP S + L GL  + L+ CR      SL ++P
Sbjct: 704 LEYFPEILGEMENITALHLERLPIKELPFSFQNLIGLREITLRRCRIVRLRCSLAMMP 761



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 4/146 (2%)

Query: 540 VEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKL 598
           V  + +L EL   G  ++  +  SI  L+ L +LN   CR L   P    NL  L +L+L
Sbjct: 641 VSDLPNLRELSFVGCESLVAIDDSIGFLNKLEILNAAGCRKLTSFPPL--NLTSLETLEL 698

Query: 599 SGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSI 658
           S CS L+ FPEI+  M++++ L L+   IKE+P S + L  L  + L  C+ +VRL  S+
Sbjct: 699 SHCSSLEYFPEILGEMENITALHLERLPIKELPFSFQNLIGLREITLRRCR-IVRLRCSL 757

Query: 659 IALKSLKTLNLSGCFKLENVPETLGQ 684
             + +L    +  C   + V    G+
Sbjct: 758 AMMPNLFRFQIRNCNSWQWVESEAGE 783



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 8/157 (5%)

Query: 588 SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLS 646
           S L  L  LK   C  L + P+ V  + +L EL F+   S+  +  SI  L KLE+LN +
Sbjct: 619 SKLGHLTVLKFDKCKFLTQIPD-VSDLPNLRELSFVGCESLVAIDDSIGFLNKLEILNAA 677

Query: 647 DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH-STSWY 705
            C+ L   P   + L SL+TL LS C  LE  PE LG++E++  L +    +     S+ 
Sbjct: 678 GCRKLTSFPP--LNLTSLETLELSHCSSLEYFPEILGEMENITALHLERLPIKELPFSFQ 735

Query: 706 SYI---PINLMRKSVALKLPSLSGLCSLRKLNLTDCN 739
           + I    I L R  +     SL+ + +L +  + +CN
Sbjct: 736 NLIGLREITLRRCRIVRLRCSLAMMPNLFRFQIRNCN 772


>gi|227438125|gb|ACP30552.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1346

 Score =  361 bits (927), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 278/858 (32%), Positives = 441/858 (51%), Gaps = 100/858 (11%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +++  E +  ++   S DVRM+GI G  G+GK+ IAR ++  +S +F    F+   R I 
Sbjct: 27  IEAHLEAMNSVLRLDSEDVRMVGIVGPSGIGKSIIARALFSHLSSQFHYKAFVSYKRTIQ 86

Query: 61  SKGGL-VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
              G+ +  + Q LS++L   +  +++    +  +  RL+ KKVL+V+DDV DV+ L++L
Sbjct: 87  DDYGMKLRWEEQFLSEILSQKEVKLFH----LGAVEQRLKHKKVLIVLDDVDDVELLKTL 142

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G   WFG GSRI++ ++D+ LL+ H +D VY+    + + ALQ+F   +F    P    
Sbjct: 143 VGQTGWFGLGSRIVVITKDKQLLRLHKIDLVYEVDYPSENLALQMFCRCSFGQNSPPDGF 202

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           ++L+  +   AG LPL L VLGS L G+  +EW   L RL      +I   L++S+D L+
Sbjct: 203 MKLAVEVANLAGNLPLGLNVLGSSLRGKDKEEWMELLPRLRDGLDGKIEKTLRVSYDELE 262

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCL--ITVHNNTLWMHDL 297
             ++++FL IAC   G   DY+ N L   G    +G+R+L +K L  IT    T+ MH L
Sbjct: 263 CKDQEVFLYIACLLNGEKVDYIKNLL---GDSVGMGLRILADKSLIRITPSRRTVNMHSL 319

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           LQ+LG++IV+ +S    GKR  L   +++C VL E+ GTE V G+  +    E  +++  
Sbjct: 320 LQKLGKEIVRAESIYNPGKRRFLVDSKDICEVLAENLGTENVLGMYFNTSELEEALFV-- 377

Query: 358 SAKAFSKMTNLRLLKICN----------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
           + ++F  M NL  LK+            L LP G  YL  +LRLL W  YPL F+  N +
Sbjct: 378 NEESFKGMRNLTFLKVYKEWSRESGEGRLCLPRGYVYLPRKLRLLYWDEYPLTFMHFNFR 437

Query: 408 MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
            +  +++ M  S++ +LW G++ L  LK + L  S  L  +PD + A NLEKL L GCT 
Sbjct: 438 AEILVKLTMENSKLEKLWDGVQPLRSLKKIRLDGSTKLKEIPDLSNAINLEKLNLWGCTS 497

Query: 468 LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDV 527
           L  +  S+   NKL  ++M+ CT                  +++LPT I+ L CL  L++
Sbjct: 498 LMTLPSSIKNLNKLRKVSMEGCT-----------------KIEALPTNIN-LGCLDYLNL 539

Query: 528 SGDLKFREFPEI---------------------VEHMEHLSELHLEGTAIRGLPLSIELL 566
            G  + R FP+I                     +E++  L++L   G ++R +PL     
Sbjct: 540 GGCSRLRRFPQISQNISGLILDGTSIDDEESSYLENIYGLTKLDWNGCSMRSMPLDFR-S 598

Query: 567 SGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGT 625
             LV L ++   +L  L   V +L  L  L LSGC  L  FP++  +   L  L L D  
Sbjct: 599 ENLVYLTMRG-STLVKLWDGVQSLGNLVRLDLSGCENLNFFPDLSEATT-LDHLELNDCK 656

Query: 626 SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI 685
           S+  +PSSI+ L KL  L +  C  L  LP+  + L+SLK L+L GC  L++ P      
Sbjct: 657 SLVVLPSSIQNLKKLTRLEMQGCTKLKVLPTD-VNLESLKYLDLIGCSNLKSFPRI---S 712

Query: 686 ESLEELDISGTAVPHSTSWY------------------SYIPINLMRKS-VALKLP---- 722
            ++ EL ++GTA+      +                   Y+P +   +S V   +P    
Sbjct: 713 RNVSELYLNGTAIEEDKDCFFIGNMHGLTELVWSYCSMKYLPSSFCAESLVKFSVPGSKL 772

Query: 723 -----SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLS 776
                 +  L SLR ++L+ C  ++  +P D+    SL+ L L+   S V LP+SI +L 
Sbjct: 773 EKLWEGIQSLGSLRTIDLSGCQSLK-EIP-DLSTATSLEYLDLTDCKSLVMLPSSIRNLK 830

Query: 777 KLLNIELEDCKRLQSLPQ 794
           KL+++++E C  L+ LP 
Sbjct: 831 KLVDLKMEGCTGLEVLPN 848



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 162/356 (45%), Gaps = 61/356 (17%)

Query: 384 YLSN--RLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSH 441
           YL N   L  L W G  ++ +P + + +  + + M  S + +LW G++ L  L  + LS 
Sbjct: 572 YLENIYGLTKLDWNGCSMRSMPLDFRSENLVYLTMRGSTLVKLWDGVQSLGNLVRLDLSG 631

Query: 442 SENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILM 501
            ENL   PD + A  L+ L L  C  L  +  S+    KL  L M+ CT           
Sbjct: 632 CENLNFFPDLSEATTLDHLELNDCKSLVVLPSSIQNLKKLTRLEMQGCT----------- 680

Query: 502 KSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLP- 560
                  LK LPT ++ L+ L  LD+ G    + FP I  ++   SEL+L GTAI     
Sbjct: 681 ------KLKVLPTDVN-LESLKYLDLIGCSNLKSFPRISRNV---SELYLNGTAIEEDKD 730

Query: 561 -LSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL-KLS-GCSKLKKFPEIVRSMKDL 617
              I  + GL  L    C S++ LP +     C  SL K S   SKL+K  E ++S+  L
Sbjct: 731 CFFIGNMHGLTELVWSYC-SMKYLPSSF----CAESLVKFSVPGSKLEKLWEGIQSLGSL 785

Query: 618 SELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSL------------ 664
             + L G  S+KE+P  +   T LE L+L+DCK+LV LPSSI  LK L            
Sbjct: 786 RTIDLSGCQSLKEIPD-LSTATSLEYLDLTDCKSLVMLPSSIRNLKKLVDLKMEGCTGLE 844

Query: 665 ------------KTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI 708
                       +  NLSGC +L + P+      S+  L +  TA+    SW   I
Sbjct: 845 VLPNDVNLVSLNQYFNLSGCSRLRSFPQI---STSIVYLHLDYTAIEEVPSWIENI 897



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 108/218 (49%), Gaps = 20/218 (9%)

Query: 392 LGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDF 451
           L W    +K+LPS+   +  ++  +  S++ +LW+GI+ L  L+ + LS  ++L  +PD 
Sbjct: 743 LVWSYCSMKYLPSSFCAESLVKFSVPGSKLEKLWEGIQSLGSLRTIDLSGCQSLKEIPDL 802

Query: 452 TGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKS 511
           + A +LE L L  C  L  +  S+    KL+ L M+ CT L  LP  + + SL +     
Sbjct: 803 STATSLEYLDLTDCKSLVMLPSSIRNLKKLVDLKMEGCTGLEVLPNDVNLVSLNQY---- 858

Query: 512 LPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVL 571
                         ++SG  + R FP+I   + +   LHL+ TAI  +P  IE +SGL  
Sbjct: 859 -------------FNLSGCSRLRSFPQISTSIVY---LHLDYTAIEEVPSWIENISGLST 902

Query: 572 LNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPE 609
           L ++ C+ L+ +      LK L  +  S C  ++ F +
Sbjct: 903 LTMRGCKKLKKVASNSFKLKSLLDIDFSSCEGVRTFSD 940


>gi|255573549|ref|XP_002527699.1| ATP binding protein, putative [Ricinus communis]
 gi|223532930|gb|EEF34698.1| ATP binding protein, putative [Ricinus communis]
          Length = 908

 Score =  361 bits (927), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 224/532 (42%), Positives = 320/532 (60%), Gaps = 38/532 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MDS  ++L  L+  GS D R +GI GMGG+GKTTIARV+++ +S  FE   FL N+RE  
Sbjct: 189 MDSHVKQLETLLCLGSFDNRTVGIWGMGGIGKTTIARVIFNKMSGSFENRCFLGNIREKI 248

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGS----RLQRKKVLLVIDDVVDVKQL 116
            K GL++LQR+ L ++    + S     D +D++ S    RL+ KKVL+V+DDV ++  L
Sbjct: 249 GKTGLLNLQREFLCEISGGENISA----DTVDVMSSFIIKRLRNKKVLVVLDDVDNLMDL 304

Query: 117 QSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
            SL G    FG GSRII+TSRD+ +L+  GVD +Y+  GLN  E+LQLF+  AF+   P 
Sbjct: 305 SSLTGGLNLFGPGSRIIVTSRDKQVLQYCGVDSIYEVKGLNNHESLQLFSHYAFEQSLPT 364

Query: 177 QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
           +    LS R+++YA GLPLAL++ GS L  RS+++W S L RLE    SE+ ++LQIS+ 
Sbjct: 365 EAYWNLSNRVLQYAKGLPLALKICGSHLCTRSIEQWESILHRLESPLNSEVQEVLQISYY 424

Query: 237 GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
           GL +L+K IFLDIACFF+G   D+V   L   GF+  IGI  LI K LI++ +  L MH+
Sbjct: 425 GLDDLDKDIFLDIACFFRGQGIDHVKEILYDSGFYADIGIARLIGKSLISISDKRLEMHN 484

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD-NYHHENEVYL 355
           L+QE+G +IV+++S  E G RSRLW  EE+ HVLT + GT  V GI LD +  H+    L
Sbjct: 485 LVQEMGWEIVRQESIYEPGSRSRLWNHEEIYHVLTSNKGTGAVRGINLDLSKIHK----L 540

Query: 356 CASAKAFSKMTNLRLLKI-----------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
           C S+ +F++M NL+ LK              L    GL YL   LRLL W  YPL  LPS
Sbjct: 541 CLSSDSFTRMGNLKFLKFYTPFSKYWEDDSKLYALEGLAYLPASLRLLHWDRYPLNSLPS 600

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENL-IRMPDFTGAP-------N 456
           N +  + +E+ +C+S++  LW+G K L+      LS  E+L +R  +F+  P       +
Sbjct: 601 NFEPRQLVELILCHSKLELLWEGAKLLES-SFSRLSSLEHLDLRGNNFSNIPGDIRQLFH 659

Query: 457 LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSL--ITLPGKILMKSLEK 506
           L+ L +  C+ L  + P L  H + +  N  DCTSL  +++P    +    +
Sbjct: 660 LKLLDISSCSNLRSL-PELPSHIEYV--NAHDCTSLESVSIPSSFTVSEWNR 708



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 129/283 (45%), Gaps = 36/283 (12%)

Query: 740 LMEGA--LPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPP 797
           L EGA  L S    L SL+ L L  N+F ++P  I  L  L  +++  C  L+SLP+LP 
Sbjct: 620 LWEGAKLLESSFSRLSSLEHLDLRGNNFSNIPGDIRQLFHLKLLDISSCSNLRSLPELPS 679

Query: 798 NIRQVRVNGCASL--VTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLE-AVS 854
           +I  V  + C SL  V++  +  + + +  M    +  KL    +L+  +  ++++   S
Sbjct: 680 HIEYVNAHDCTSLESVSIPSSFTVSEWNRPMFLFTNCFKL----NLSAFLNSQFIDLQES 735

Query: 855 NTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGN 914
                  +  PGS+IPE   +Q+ GS +TV  P + ++  +  G+A+  V    K+   N
Sbjct: 736 GLLPSAGICFPGSKIPEQISHQSAGSLLTVQLPVH-WSNSQFRGFALAAVIG-FKDCLDN 793

Query: 915 NCFGSYPTHQLNCHIGHGIY----GIGFRDKFGQA------GSDHLWLLYLSRQTCYDIR 964
           + F    T +L    G  I      I F    G        GSDH++L Y  R       
Sbjct: 794 HGFLVKCTIKLRAMHGDSISLQQEFIIFHGHSGHWNNSRILGSDHVFLSYNHRVNL---- 849

Query: 965 LPLESNLEPFE--SNHVNVSFEPW----LGQ---GLEVKMCGL 998
             +ES  + ++  S H   SF+ +    +G+   G EV+ CG 
Sbjct: 850 --MESQGDDWQNKSCHTTASFDFYAVDSMGRPLCGSEVRECGF 890


>gi|3860165|gb|AAC72978.1| disease resistance protein RPP1-WsB [Arabidopsis thaliana]
          Length = 1221

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 292/900 (32%), Positives = 449/900 (49%), Gaps = 88/900 (9%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MD   + LR ++D    +VRMIGI G  G+GKTTIAR +++ +S  F+ S  + N++   
Sbjct: 266  MDMLEQLLRLVLD----EVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCY 321

Query: 61   SK------GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
             +         + LQ Q+LSQ++   D  I      + +   RL+ KKV LV+D+V  + 
Sbjct: 322  PRPCFDEYSAQLQLQNQMLSQMINHKDIMI----SHLGVAQERLRDKKVFLVLDEVDQLG 377

Query: 115  QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
            QL +LA    WFG GSRIIIT+ D  +LK HG++ VYK    + DEA Q+F M AF   Q
Sbjct: 378  QLDALAKETRWFGPGSRIIITTEDLGVLKAHGINHVYKVGYPSNDEAFQIFCMNAFGQKQ 437

Query: 175  PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
            P +   +++  ++  AG LPL L+VLGS L G+S  EW  TL RL+     +I  I+Q S
Sbjct: 438  PHEGFDEIAREVMALAGELPLGLKVLGSALRGKSKPEWERTLPRLKTSLDGKIGSIIQFS 497

Query: 235  FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
            +D L + +K +FL IAC F       V   L G       G+ +L +K LI++ +  ++M
Sbjct: 498  YDALCDEDKYLFLYIACLFNKESTTKVEGLL-GKFLDVRQGLHILAQKSLISIEDGNIYM 556

Query: 295  HDLLQELGQQIVQRQSPEE-LGKRSRLWKEEEVCHVLTEST-GTELVEGIVLDNYHHENE 352
            H LL++ G++  ++Q       K   L  E ++C VL + T  +    GI LD Y +  E
Sbjct: 557  HTLLEQFGRETSRKQFIHHGYTKHQLLVGERDICEVLNDDTIDSRRFIGINLDLYKNVEE 616

Query: 353  VYLCASAKAFSKMTNLRLLKICNLQLP-----NGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
            + +  S KA  ++ + + ++I            GL Y S ++R L W+ Y    LPS   
Sbjct: 617  LNI--SEKALERIHDFQFVRINGKNHALHERLQGLIYQSPQIRSLHWKCYQNICLPSTFN 674

Query: 408  MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
             +  +E+ M +S++ +LW+G K L  LK M LS+S  L  +P+ + A NLE+L L  C+ 
Sbjct: 675  SEFLVELDMSFSKLQKLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELKLRNCSS 734

Query: 468  LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDV 527
            L E+  S+     L IL++  C+SL+ LP       LE LNL++         C S + +
Sbjct: 735  LVELPSSIEKLTSLQILDLHRCSSLVELPSFGNATKLEILNLEN---------CSSLVKL 785

Query: 528  SGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVT 586
                     P I  +  +L EL L   + +  LP +IE  + L  LNL NC SL  LP++
Sbjct: 786  P--------PSI--NANNLQELSLTNCSRVVELP-AIENATNLWKLNLLNCSSLIELPLS 834

Query: 587  VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLTKLELLNL 645
            +     L+ L   GCS L K P  +  M +L   +L   S + E+PSSI  L KL LL +
Sbjct: 835  IGTATNLKHLDFRGCSSLVKLPSSIGDMTNLEVFYLSNCSNLVELPSSIGNLRKLTLLLM 894

Query: 646  SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWY 705
              C  L  LP++ I LKSL TLNL  C +L++ PE    I+ L    + GTA+       
Sbjct: 895  RGCSKLETLPTN-INLKSLHTLNLIDCSRLKSFPEISTHIKYLR---LIGTAI------- 943

Query: 706  SYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSF 765
                     K V L + S S L   +            AL  DI     + EL LSK+  
Sbjct: 944  ---------KEVPLSIMSWSPLAHFQISYFESLKEFPHAL--DI-----ITELQLSKD-I 986

Query: 766  VSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDST 825
              +P  +  +S+L  + L +C  L SLPQLP ++  +  + C SL               
Sbjct: 987  QEVPPWVKRMSRLRALRLNNCNNLVSLPQLPDSLAYLYADNCKSL-------------ER 1033

Query: 826  MIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQ-NEGSSITV 884
            +  C ++ ++       F + +E  + + +T      ++PG+++P  F ++   G S+ +
Sbjct: 1034 LDCCFNNPEIRLYFPKCFKLNQEARDLIMHTSTRNFAMLPGTQVPACFNHRATSGDSLKI 1093


>gi|357461481|ref|XP_003601022.1| TMV resistance protein N [Medicago truncatula]
 gi|355490070|gb|AES71273.1| TMV resistance protein N [Medicago truncatula]
          Length = 868

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 220/567 (38%), Positives = 330/567 (58%), Gaps = 51/567 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++SR E+L   +D  S+ V MIGI GMGG GKTT A+ +Y+ I+ +F    F++N+REI 
Sbjct: 57  LESRVEELIEFIDDQSNKVCMIGIWGMGGSGKTTTAKAIYNQINRKFADRSFIENIREIC 116

Query: 61  SKG--GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            K   G++ LQ QLLS +LK+    I ++  G  M+  RL+ K VL+++DDV   +Q+++
Sbjct: 117 EKDNTGIIRLQEQLLSDVLKIKVKKIHSITSGTTMIEKRLRGKTVLVILDDVSKFEQIKA 176

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L GNR+WFG+GS +I+T+RD HLLK   V  V     ++ DE+L+LF+  AF+   P + 
Sbjct: 177 LCGNRKWFGTGSVLIVTTRDVHLLKLLKVAHVCTMKEMDEDESLELFSWHAFREPSPTKY 236

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             +LS  ++ Y GGLPLALE+LGS+L GR+  EW S L +LE  P  ++ + L+IS+DGL
Sbjct: 237 FTELSRNVVAYCGGLPLALEILGSYLYGRTKREWTSVLSKLERIPNDQVQEKLRISYDGL 296

Query: 239 QE-LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHD 296
           ++ +EK IFLDI  FF G DR YVT  L G G +  IGI VL+E+ L+ +  NN L MHD
Sbjct: 297 KDDMEKDIFLDICFFFIGKDRAYVTKILNGRGLYADIGITVLVERSLVKIEKNNKLGMHD 356

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL+++G++IV++ S +  GKRSRLW  E+V  VLT++  T+ VEG+    +  +    +C
Sbjct: 357 LLRDMGREIVRQSSVKNPGKRSRLWFHEDVHDVLTKNMVTKTVEGLA---FKLQRTDRVC 413

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            S  +F +M  LRLL++  + L    +  SN+LR + W+G+    +P +      + + +
Sbjct: 414 FSTNSFKEMKKLRLLQLDCVNLIGDYDCFSNQLRWVKWQGFTFNNIPDDFYQGNLVAMDL 473

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
            +S I ++W                             P L K I++ C  L +IH S+ 
Sbjct: 474 KHSNIRQVW-------------------------IETTPRLFK-IMKDCPNLSDIHQSIG 507

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
             N L+++N+KDCTSL +LP KI                   LK L TL +SG  K    
Sbjct: 508 NLNSLLLINLKDCTSLNSLPKKIYQ-----------------LKSLKTLILSGCSKIENL 550

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSI 563
            EIV+ ME L+ L  + T ++ +P SI
Sbjct: 551 EEIVQ-MESLTTLIAKDTGVKEVPCSI 576



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 128/313 (40%), Gaps = 49/313 (15%)

Query: 608 PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL 667
           P + + MKD   L        ++  SI  L  L L+NL DC +L  LP  I  LKSLKTL
Sbjct: 487 PRLFKIMKDCPNL-------SDIHQSIGNLNSLLLINLKDCTSLNSLPKKIYQLKSLKTL 539

Query: 668 NLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGL 727
            LSGC K+EN+ E + Q+ESL  L    T V         +P ++M  ++   LP +S  
Sbjct: 540 ILSGCSKIENLEEIV-QMESLTTLIAKDTGVKE-------VPCSIMSPTMN-SLPRVSTF 590

Query: 728 CSLRKLNLTDCNLME-GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDC 786
            ++   +LT  N+   G L   I +L  L+ +++                          
Sbjct: 591 GNM-AFSLTSINVHNVGFLSPVIKSLSQLRTVWV-------------------------- 623

Query: 787 KRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSML 846
            + +S  QL   +R++      +  T L+     +  +  +  L  L  +G+  +    L
Sbjct: 624 -QCRSKIQLTQELRRILGGQYDANFTKLETSHASQFSNHSLRSL--LIRMGSCHIVIDTL 680

Query: 847 REYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFH 906
            + +     T  +  + +PG   P W  Y  EG S     P ++    K  G  +C V+ 
Sbjct: 681 GKSISQEPTTNNYSDLFLPGGNYPSWLAYTGEGPSAQFQVPEDIDCHMK--GIILCTVYS 738

Query: 907 VLKNSRGNNCFGS 919
               + G  C  S
Sbjct: 739 STSENMGVECLTS 751



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 10/114 (8%)

Query: 575 KNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSI 634
           K+C SL  LP  +  LK L++L LSGCSK++   EIV+ M+ L+ L    T +KEVP SI
Sbjct: 518 KDCTSLNSLPKKIYQLKSLKTLILSGCSKIENLEEIVQ-MESLTTLIAKDTGVKEVPCSI 576

Query: 635 ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
              T   L  +S   N+           SL ++N+     L  V ++L Q+ ++
Sbjct: 577 MSPTMNSLPRVSTFGNMAF---------SLTSINVHNVGFLSPVIKSLSQLRTV 621


>gi|357456965|ref|XP_003598763.1| Resistance protein [Medicago truncatula]
 gi|355487811|gb|AES69014.1| Resistance protein [Medicago truncatula]
          Length = 1184

 Score =  361 bits (926), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 223/568 (39%), Positives = 339/568 (59%), Gaps = 25/568 (4%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
           V M+GI G+GG+GK+T AR V++LI+ +FE   FLD++R+      L  LQ  LL+ +L 
Sbjct: 219 VNMVGIYGIGGIGKSTTARAVHNLIADQFEGVCFLDDIRKREINHDLAQLQETLLADILG 278

Query: 79  LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
             D  + +V+ G+ ++  RLQRKKVLL++D+V  V+QLQ+  G  +WFG GS++I+T+RD
Sbjct: 279 EKDIKVGDVYRGMSIVKRRLQRKKVLLILDNVDKVQQLQAFVGGHDWFGFGSKVIVTTRD 338

Query: 139 EHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC-VQLSARIIRYAGGLPLAL 197
           +HLL THG+ +VY+   L  ++AL+LF+  AFK  + +  C V ++ R++ Y  GLPLAL
Sbjct: 339 KHLLATHGIVKVYEVKQLKSEKALELFSWHAFKN-KKIDPCYVDIAKRLVSYCHGLPLAL 397

Query: 198 EVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGND 257
           EV+GS L G+S+  W+S+L + +     +I +IL++S+D L+E EK IFLDIACFF   +
Sbjct: 398 EVIGSHLFGKSLGVWKSSLVKYKRVLRKDIHEILKVSYDDLEEDEKGIFLDIACFFNSYE 457

Query: 258 RDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPEELGK 316
             YV   L   GF    GI+VLI+K L+ +  N  + MHDL+Q +G++IV+R+S  E G+
Sbjct: 458 ISYVKELLYLHGFQAEDGIQVLIDKSLMKIDINGCVRMHDLIQGMGREIVRRESTSEPGR 517

Query: 317 RSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNL 376
           RSRLW  +++  VL E+ GT+ +E I+ D      +V  C   KAF +M NLR+L I N 
Sbjct: 518 RSRLWFSDDIVRVLEENKGTDTIEVIIAD-LRKGRKVKWC--GKAFGQMKNLRILIIRNA 574

Query: 377 QLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKV 436
               G + L N L +L W GY L  LPS+    K + I        + ++ +K  + L  
Sbjct: 575 GFSRGPQILPNSLSVLDWSGYQLSSLPSDF-YPKNLVILNLPESCLKWFESLKVFETLSF 633

Query: 437 MILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLP 496
           +     + L  MP  +  PNL  L L+ CT L +IH S+    +L++L+ + CT L  L 
Sbjct: 634 LDFEGCKLLTEMPSLSRVPNLGALCLDYCTNLNKIHDSVGFLERLVLLSAQGCTQLEILV 693

Query: 497 GKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAI 556
             I + SLE                  TLD+ G  +   FPE+V  ME++ +++L+ TA+
Sbjct: 694 PYINLPSLE------------------TLDLRGCSRLESFPEVVGVMENIKDVYLDQTAL 735

Query: 557 RGLPLSIELLSGLVLLNLKNCRSLEILP 584
           + LP +I  L GL  L L+ C+ + +LP
Sbjct: 736 KQLPFTIGNLIGLRRLFLRGCQGMIMLP 763



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 115/233 (49%), Gaps = 25/233 (10%)

Query: 451 FTGAPNLEKLILE--GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN 508
           F    NL  LI+   G +R  +I P     N L +L+      L +LP     K+L  LN
Sbjct: 560 FGQMKNLRILIIRNAGFSRGPQILP-----NSLSVLDWSG-YQLSSLPSDFYPKNLVILN 613

Query: 509 LKSLPTTISGLKCLSTLDVSGDLKFREFP--EIVEHMEHLSELHLEG-------TAIRGL 559
           L       S LK   +L V   L F +F   +++  M  LS +   G       T +  +
Sbjct: 614 LPE-----SCLKWFESLKVFETLSFLDFEGCKLLTEMPSLSRVPNLGALCLDYCTNLNKI 668

Query: 560 PLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSE 619
             S+  L  LVLL+ + C  LEIL V   NL  L +L L GCS+L+ FPE+V  M+++ +
Sbjct: 669 HDSVGFLERLVLLSAQGCTQLEIL-VPYINLPSLETLDLRGCSRLESFPEVVGVMENIKD 727

Query: 620 LFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC 672
           ++LD T++K++P +I  L  L  L L  C+ ++ LPS I  L   + +   GC
Sbjct: 728 VYLDQTALKQLPFTIGNLIGLRRLFLRGCQGMIMLPSYI--LPKFEIITSYGC 778



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 91/170 (53%), Gaps = 14/170 (8%)

Query: 533 FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL-KNC-RSLEILPVTVSNL 590
           F   P+I+ +   LS L   G  +  LP S      LV+LNL ++C +  E L V     
Sbjct: 576 FSRGPQILPN--SLSVLDWSGYQLSSLP-SDFYPKNLVILNLPESCLKWFESLKV----F 628

Query: 591 KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCK 649
           + L  L   GC  L + P + R + +L  L LD  T++ ++  S+  L +L LL+   C 
Sbjct: 629 ETLSFLDFEGCKLLTEMPSLSR-VPNLGALCLDYCTNLNKIHDSVGFLERLVLLSAQGCT 687

Query: 650 NL-VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
            L + +P   I L SL+TL+L GC +LE+ PE +G +E+++++ +  TA+
Sbjct: 688 QLEILVP--YINLPSLETLDLRGCSRLESFPEVVGVMENIKDVYLDQTAL 735



 Score = 47.4 bits (111), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 22/199 (11%)

Query: 633 SIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD 692
           S+++   L  L+   CK L  +PS +  + +L  L L  C  L  + +++G +E L  L 
Sbjct: 624 SLKVFETLSFLDFEGCKLLTEMPS-LSRVPNLGALCLDYCTNLNKIHDSVGFLERLVLLS 682

Query: 693 ISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNL 752
             G                     + + +P ++ L SL  L+L  C+ +E + P  +G +
Sbjct: 683 AQGCT------------------QLEILVPYIN-LPSLETLDLRGCSRLE-SFPEVVGVM 722

Query: 753 CSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ-LPPNIRQVRVNGCASLV 811
            ++K++YL + +   LP +I +L  L  + L  C+ +  LP  + P    +   GC    
Sbjct: 723 ENIKDVYLDQTALKQLPFTIGNLIGLRRLFLRGCQGMIMLPSYILPKFEIITSYGCRGFR 782

Query: 812 TLLDALKLCKSDSTMIACL 830
           +  D  K+     T   C+
Sbjct: 783 SSEDEEKVSPKVFTNAMCV 801


>gi|357487993|ref|XP_003614284.1| TMV resistance protein N [Medicago truncatula]
 gi|355515619|gb|AES97242.1| TMV resistance protein N [Medicago truncatula]
          Length = 1047

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 223/569 (39%), Positives = 337/569 (59%), Gaps = 28/569 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEA-SGFLDNVREI 59
           ++S  +++  ++D  S  V +IGI GMGGLGKTT A+ +Y+ I   F+  + FL+++RE+
Sbjct: 189 LESHVQQITKIIDDQSCKVCIIGIWGMGGLGKTTTAKALYNQIHRRFQGRTSFLESIREV 248

Query: 60  --SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
             ++ GG+++LQ QLL  LL++    I ++  G   + +RLQR+KVL+V+DDV   +QL+
Sbjct: 249 CDNNSGGVITLQEQLLLDLLEIK-QKIHSIALGKTKIMTRLQRQKVLVVLDDVTKSEQLK 307

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
           +L  N +  GSGS +IIT+RD  LLK+  VD VY    ++  ++L+LF+  AF+   P  
Sbjct: 308 ALCANPKLLGSGSVLIITTRDLRLLKSFKVDHVYTMTEMDKHQSLELFSCHAFQQPNPRD 367

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
           +  +LS  ++ Y  GLPLALEVLG +LS R+  EWR  L+ LE  P +++  IL+IS+DG
Sbjct: 368 KFSELSRNVVAYCKGLPLALEVLGCYLSERTEKEWRDALQILEKIPNNDVQQILRISYDG 427

Query: 238 LQELEKK-IFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMH 295
           L++  K+ IFLDI CFF G +R  VT  L GCG H  IGI +LIE+ L+ V  NNTL MH
Sbjct: 428 LEDYTKQDIFLDICCFFIGKNRADVTEILNGCGLHADIGISILIERSLVKVEKNNTLGMH 487

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD-NYHHENEVY 354
           DLL+++G+ I    S +E  K SRLW  ++V  VL +  GTE+VEG++ +    H     
Sbjct: 488 DLLRDMGRSIAGESSIKEPAKHSRLWFHDDVNDVLLKKNGTEIVEGLIFELPITHRTRF- 546

Query: 355 LCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
                 AF  M  LRLLK+  + L      +S +LR + W+    K +P +  +   +  
Sbjct: 547 ---GTNAFQDMKKLRLLKLDGVDLIGDYGLISKQLRWVDWQRPTFKCIPDDSDLGNLVVF 603

Query: 415 YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
            + +S IG++W+  K LDKLK++ +SH++ L   PDF+  PNLEKLI+  C  L E+H S
Sbjct: 604 ELKHSNIGQVWQEPKLLDKLKILNVSHNKYLKITPDFSKLPNLEKLIMMECPSLIEVHQS 663

Query: 475 LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFR 534
           +     ++++N++DC SL  LP +I                   L  + TL +SG  K  
Sbjct: 664 IGDLKNIVLINLRDCKSLANLPREIYQ-----------------LISVKTLILSGCSKIE 706

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSI 563
           +  E +  ME L+ L    T I+ +P SI
Sbjct: 707 KLEEDIMQMESLTALIAANTGIKQVPYSI 735



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 178/446 (39%), Gaps = 62/446 (13%)

Query: 590  LKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLSDC 648
            L  L+ L +S    LK  P+  + + +L +L  ++  S+ EV  SI  L  + L+NL DC
Sbjct: 620  LDKLKILNVSHNKYLKITPDFSK-LPNLEKLIMMECPSLIEVHQSIGDLKNIVLINLRDC 678

Query: 649  KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI 708
            K+L  LP  I  L S+KTL LSGC K+E + E + Q+ESL  L  + T +         +
Sbjct: 679  KSLANLPREIYQLISVKTLILSGCSKIEKLEEDIMQMESLTALIAANTGIKQ-------V 731

Query: 709  PINLMRKSVALKLPSLSGLCSLRKLNLTDC---------NLMEGALPSDIGNLCSLKELY 759
            P ++ R S ++   SL G   L                 N +    P   GN  SL  L 
Sbjct: 732  PYSIAR-SKSIGYISLCGYEGLSHDVFPSLIWSWMSPTRNSLSHVFPF-AGNSLSLVSLD 789

Query: 760  LSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKL 819
            +  N+       +T LSKL  +  +      S  QL   +R+   +      T L+    
Sbjct: 790  VESNNMDYQSPMVTVLSKLRCVWFQ----CHSENQLTQELRRFIDDLYDVNFTELETTSH 845

Query: 820  CKSDSTMIACLDSLKL-LGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNE 878
                  +   L SL + +G+  +    L + L     T    S  +PG   P W  Y+ E
Sbjct: 846  GHQIKNLF--LKSLVIGMGSSQIVTDTLGKSLAQGLATNSSDS-FLPGDNYPSWLAYKCE 902

Query: 879  GSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSY---PTHQLNCHIGHGIYG 935
            GSS+    P +  +   + G A+C V+     +    C  S       +L   I      
Sbjct: 903  GSSVLFQVPED--SGSCMKGIALCVVYSSTPQNLPIECITSVLIINYTKLTIQI------ 954

Query: 936  IGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKM 995
              ++D    + +D  W   LS        L +  N+E F +          +G G  VK 
Sbjct: 955  --YKDDTIMSFNDEDWEGVLS-------NLKVGDNVEIFVA----------IGHGFTVKE 995

Query: 996  CGLHPVYMD----EVEELDQTTNQPS 1017
               + +Y      E+E + +   QPS
Sbjct: 996  TAAYLIYGQPTAVEIEPIPEVDAQPS 1021


>gi|297846862|ref|XP_002891312.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337154|gb|EFH67571.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1159

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 282/860 (32%), Positives = 427/860 (49%), Gaps = 123/860 (14%)

Query: 84   IWNVFDGIDMLGSRLQRKKVL--LVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHL 141
            IW    G   +G  L +K+ L  +++DDV  + QL +LA    WFG GSR+IIT  D  L
Sbjct: 212  IW----GPSGIGRGLYKKEFLFLVILDDVDRLGQLDALAKETRWFGPGSRVIITMEDRKL 267

Query: 142  LKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLG 201
            L+ HG++ +YK    + +EA+Q+F M AF    P      L+  +   AG LPL L+V+G
Sbjct: 268  LQGHGINHIYKVDFPSTEEAVQIFCMNAFGQNSPKDGFEGLAWEVANLAGELPLGLKVMG 327

Query: 202  SFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYV 261
            S+  G S +EW+S L RL      EI  I+  S+D L + +K++FL IACFF   + + V
Sbjct: 328  SYFRGMSKEEWKSALPRLRTSLDGEIESIINFSYDALSDKDKELFLHIACFFNHKEMEKV 387

Query: 262  TNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLW 321
               L     +   G+ VL +K LI++++  + MH+LL +LG++IV RQS  E G+R  L 
Sbjct: 388  EEHLAKKFSYLKQGLHVLADKSLISINSTYMEMHNLLAQLGREIVCRQSINEPGQRQFLI 447

Query: 322  KEEEVCHVLT-ESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICN----- 375
               E+C VLT ++TG+  V GI L+    E+E+ +  S + F  M+NL+ L+I +     
Sbjct: 448  DSREICEVLTDDATGSRNVIGIELNFGESEDELNI--SERGFEGMSNLQFLRIYSDHINP 505

Query: 376  --LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDK 433
              + LP GL YLS +LRLL W  +P+   PS +  +  +E+ MC+S++ +LW+GIK L  
Sbjct: 506  GKMFLPQGLNYLSRKLRLLHWIHFPMTCFPSIVNPEFLVELVMCHSKLEKLWEGIKPLRN 565

Query: 434  LKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLI 493
            LK M LS S NL  +PD + A NL++L    C+ L ++  S+     L ILN+ DC++L+
Sbjct: 566  LKWMDLSSSVNLKVLPDLSTATNLKELDCSFCSSLVKLPFSIGNAINLEILNLYDCSNLV 625

Query: 494  TLPGKI-LMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLE 552
             LP  I  + +++K N +         +C S +         E P  V     L EL L 
Sbjct: 626  ELPSSIGNLINIKKFNFR---------RCSSLV---------ELPSSVGKATKLEELEL- 666

Query: 553  GTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVR 612
            G A           + L  L L NC SL  LP ++     L+  K+SGCS L K    + 
Sbjct: 667  GNA-----------TNLKELYLYNCSSLVKLPFSIGTFSHLKKFKISGCSNLVKLSSSIG 715

Query: 613  SMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSI-IALKSLKTLNLS 670
            +  DL EL F   +S+ E+PS I   T LELL+L  C NLV+LPSSI  A+ +L  L+ S
Sbjct: 716  NATDLKELDFSFCSSLVELPSYIGNATNLELLDLRGCSNLVQLPSSIGNAIVTLDRLDFS 775

Query: 671  GCFKLENVPETLGQIESLEELDISGTA----VPHST-SWYSYIPINLMRKSVALKLPSLS 725
            GC  L  +P ++G+  +L+ L+ SG +    +P S  + +    + L R S    LP   
Sbjct: 776  GCSSLVAIPSSIGKAINLKYLEFSGYSSLVELPASIGNLHKLSSLTLNRCSKLEVLPINI 835

Query: 726  GLCSLRKLNLTDCNLMEGALPSDIGNLCSLK----------------------------- 756
             L SL  L LTDC+L++ + P    N+  L                              
Sbjct: 836  NLQSLEALILTDCSLLK-SFPEISTNISYLDLSGTAIEEVPLSISLWSRLETLHMSYSEN 894

Query: 757  ------------ELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRV 804
                        +L+LS      +   +  +S+L  + L+ C +L SLPQLP ++ ++  
Sbjct: 895  LKNFPHALDIITDLHLSDTKIQEVAPWVKRISRLRRLVLKGCNKLLSLPQLPDSLSELDA 954

Query: 805  NGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVV 864
              C SL  L  +    ++ + +I                            T      V+
Sbjct: 955  ENCESLERLDCSFLDPQARNVII---------------------------QTSTCEVSVL 987

Query: 865  PGSEIPEWFMYQNEGSSITV 884
            PG E+P +F Y+  G S+ V
Sbjct: 988  PGREMPTYFTYRANGDSLRV 1007


>gi|15230846|ref|NP_189178.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
 gi|332643497|gb|AEE77018.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
          Length = 1981

 Score =  360 bits (923), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 312/990 (31%), Positives = 466/990 (47%), Gaps = 121/990 (12%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M +  E +R L+     DVRMIGI G  G+GKTTIAR +   +S  F+ S  + N++E  
Sbjct: 205  MGAHMENMRALLRLDLDDVRMIGIWGPPGIGKTTIARFLLSQVSKSFQLSTIMVNIKECY 264

Query: 61   SKGGL--VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
                L   S+Q QL +++L    N    +   + +   RL+ KKV LV+DDV  + QL +
Sbjct: 265  PSPCLDEYSVQLQLQNKMLSKMINQKDIMIPHLGVAQERLKDKKVFLVLDDVDQLGQLDA 324

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            LA    WFG GSRIIIT+ +  LL  H ++ +YK    + DEA Q+F M AF    P   
Sbjct: 325  LAKETRWFGPGSRIIITTENLRLLMAHRINHIYKVEFSSTDEAFQIFCMHAFGQKHPYNG 384

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
              +LS  +   AGGLPL L+V+GS L G S  EW+ TL RL      +I  IL  S++ L
Sbjct: 385  FYELSREVTELAGGLPLGLKVMGSSLRGMSKQEWKRTLPRLRTCLDGKIESILMFSYEAL 444

Query: 239  QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
               +K +FL IACFF       V   L         G+ VL EK LI +      MH LL
Sbjct: 445  SHEDKDLFLCIACFFNYQKIKKVEKHLADRFLDVRQGLYVLAEKSLIHIGTGATEMHTLL 504

Query: 299  QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTEST--GTELVEGIVLDNYHHENEVYLC 356
             +LG++I   QS  +  K   L  E E+C  L++ T   +  + G+  D   +  EV   
Sbjct: 505  VQLGREIAHTQSTNDPRKSLFLVDEREICEALSDETMDSSRRIIGMDFDLSKNGEEVT-N 563

Query: 357  ASAKAFSKMTNLRLLKI----CNLQLPN---------------------GLEYLSNRLRL 391
             S K   +M+NL+ ++     C     N                      L Y    +RL
Sbjct: 564  ISEKGLQRMSNLQFIRFDGRSCARHSSNLTVVRSSDNNCAHPDTVNALQDLNYQFQEIRL 623

Query: 392  LGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDF 451
            L W  +    LPS    +  +E+ M  S    LW+G K L  LK M LS+S +L  +PD 
Sbjct: 624  LHWINFRRLCLPSTFNPEFLVELNMPSSTCHTLWEGSKALRNLKWMDLSYSISLKELPDL 683

Query: 452  TGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKIL-MKSLEKLNLK 510
            + A NLE+LIL+ C  L ++   +    KL +L +  CTS++ LP     +  L+ L+L 
Sbjct: 684  STATNLEELILKYCVSLVKVPSCVGKLGKLQVLCLHGCTSILELPSFTKNVTGLQSLDLN 743

Query: 511  ------SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG----------- 553
                   LP++I     L  LD+ G L+  + P  +    +L +  L G           
Sbjct: 744  ECSSLVELPSSIGNAINLQNLDL-GCLRLLKLPLSIVKFTNLKKFILNGCSSLVELPFMG 802

Query: 554  -------------TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
                         +++  LP SI     L  L+L NC SL  LP  + N   L  L L  
Sbjct: 803  NATNLQNLDLGNCSSLVELPSSIGNAINLQNLDLSNCSSLVKLPSFIGNATNLEILDLRK 862

Query: 601  CSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSII 659
            CS L + P  +  + +L  L L G +S+ E+PSS+  +++L++LNL +C NLV+LPSS  
Sbjct: 863  CSSLVEIPTSIGHVTNLWRLDLSGCSSLVELPSSVGNISELQVLNLHNCSNLVKLPSSFG 922

Query: 660  ALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA----VPHST-SWYSYIPINLMR 714
               +L  L+LSGC  L  +P ++G I +L+EL++   +    +P S  + +    ++L R
Sbjct: 923  HATNLWRLDLSGCSSLVELPSSIGNITNLQELNLCNCSNLVKLPSSIGNLHLLFTLSLAR 982

Query: 715  KSVALKLPSLSGLCSLRKLNLTDCN---------------LMEGA----LPSDIGNLCSL 755
                  LPS   L SL +L+LTDC+                ++G     +PS I +   L
Sbjct: 983  CQKLEALPSNINLKSLERLDLTDCSQFKSFPEISTNIECLYLDGTAVEEVPSSIKSWSRL 1042

Query: 756  KELYLSK----NSFVSLPTSITHL----------------SKLLNIELEDCKRLQSLPQL 795
              L++S       F  +   IT L                S+L  + L  C++L SLPQL
Sbjct: 1043 TVLHMSYFEKLKEFSHVLDIITWLEFGEDIQEVAPWIKEISRLHGLRLYKCRKLLSLPQL 1102

Query: 796  PPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSN 855
            P ++  +   GC SL TL      C  +       + L LL N +  F + +E  + +  
Sbjct: 1103 PESLSIINAEGCESLETL-----DCSYN-------NPLSLL-NFAKCFKLNQEARDFIIQ 1149

Query: 856  TRQHLSVVVPGSEIPEWFMYQ-NEGSSITV 884
                   V+PG+E+P +F ++   G+S+T+
Sbjct: 1150 IPTSNDAVLPGAEVPAYFTHRATTGASLTI 1179



 Score =  305 bits (782), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 203/539 (37%), Positives = 301/539 (55%), Gaps = 28/539 (5%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M +  E++  L+   S +VRMIGI G  G+GKTTIAR ++   S  FE S F++N++E+ 
Sbjct: 1427 MGAHMERMELLLCLDSDEVRMIGIWGPSGIGKTTIARFLFSQFSDSFELSAFMENIKELM 1486

Query: 61   SKGGLVS--------LQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVD 112
             +  + S        LQ Q +SQ++   D  +      + ++ +RL  KKVL+V+D++  
Sbjct: 1487 YRKPVCSDDYSAKLHLQNQFMSQIINHMDVEV----PHLGVVENRLNDKKVLIVLDNIDQ 1542

Query: 113  VKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKT 172
              QL ++A    WFG GSRIIIT++D+ LLK HG++ +YK    +  EA Q+F M A   
Sbjct: 1543 SMQLDAIAKETRWFGHGSRIIITTQDQKLLKAHGINHIYKVDYPSTHEACQIFCMSAVGK 1602

Query: 173  YQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQ 232
              P  E  +L+  +    G LPL L V+GS   G S  EW + L RL     S I  IL+
Sbjct: 1603 KFPKDEFQELALEVTNLLGNLPLGLRVMGSHFRGMSKQEWINALPRLRTHLDSNIQSILK 1662

Query: 233  ISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTL 292
             S+D L   +K +FL IAC F     + V   L            VL EK LI++    +
Sbjct: 1663 FSYDALCREDKDLFLHIACTFNNKRIENVEAHLTHKFLDTKQRFHVLAEKSLISIEEGWI 1722

Query: 293  WMHDLLQELGQQIV--QRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHE 350
             MH+LL+ LG++IV  + +S  E GKR  L    ++C VLT+ TG++ V GI  ++    
Sbjct: 1723 KMHNLLELLGREIVCHEHESIREPGKRQFLVDARDICEVLTDDTGSKSVVGIYFNSAELL 1782

Query: 351  NEVYLCASAKAFSKMTNLRLLKI-CN----LQLPNGLEYLSNRLRLLGWRGYPLKFLPSN 405
             E+ +  S +AF  M+NL+ L+I C+    + LP GL+Y+S +LRLL W  +PL  LPSN
Sbjct: 1783 GELNI--SERAFEGMSNLKFLRIKCDRSDKMYLPRGLKYISRKLRLLEWDRFPLTCLPSN 1840

Query: 406  LQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
               +  +E+ M +S++ +LW+G   L  LK M L HS+NL  +PDF+ A NL+ LIL GC
Sbjct: 1841 FCTEYLVELNMRHSKLVKLWEGNLSLGNLKWMNLFHSKNLKELPDFSTATNLQTLILCGC 1900

Query: 466  TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI-LMKSLEKLNLKS------LPTTIS 517
            + L E+  S+   N L  L++  CTSL+ LP  I  +  L+ + LK       +PT I+
Sbjct: 1901 SSLVELPYSIGSANNLQKLHLCRCTSLVELPASIGNLHKLQNVTLKGCSKLEVVPTNIN 1959



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 3/118 (2%)

Query: 569  LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSI 627
            LV LN+++ + +++    +S L  L+ + L     LK+ P+   +  +L  L L G +S+
Sbjct: 1846 LVELNMRHSKLVKLWEGNLS-LGNLKWMNLFHSKNLKELPDF-STATNLQTLILCGCSSL 1903

Query: 628  KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI 685
             E+P SI     L+ L+L  C +LV LP+SI  L  L+ + L GC KLE VP  +  I
Sbjct: 1904 VELPYSIGSANNLQKLHLCRCTSLVELPASIGNLHKLQNVTLKGCSKLEVVPTNINLI 1961



 Score = 44.7 bits (104), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 4/86 (4%)

Query: 710  INLMRKSVALKLPSLSGLCSLRKLNLTDCN-LMEGALPSDIGNLCSLKELYLSK-NSFVS 767
            +NL       +LP  S   +L+ L L  C+ L+E  LP  IG+  +L++L+L +  S V 
Sbjct: 1872 MNLFHSKNLKELPDFSTATNLQTLILCGCSSLVE--LPYSIGSANNLQKLHLCRCTSLVE 1929

Query: 768  LPTSITHLSKLLNIELEDCKRLQSLP 793
            LP SI +L KL N+ L+ C +L+ +P
Sbjct: 1930 LPASIGNLHKLQNVTLKGCSKLEVVP 1955



 Score = 44.7 bits (104), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 2/116 (1%)

Query: 544  EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            E+L EL++  + +  L      L  L  +NL + ++L+ LP   S    L++L L GCS 
Sbjct: 1844 EYLVELNMRHSKLVKLWEGNLSLGNLKWMNLFHSKNLKELP-DFSTATNLQTLILCGCSS 1902

Query: 604  LKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSI 658
            L + P  + S  +L +L L   TS+ E+P+SI  L KL+ + L  C  L  +P++I
Sbjct: 1903 LVELPYSIGSANNLQKLHLCRCTSLVELPASIGNLHKLQNVTLKGCSKLEVVPTNI 1958


>gi|224127242|ref|XP_002329435.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870485|gb|EEF07616.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 909

 Score =  360 bits (923), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 263/741 (35%), Positives = 394/741 (53%), Gaps = 67/741 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D R  K+  L++  S DV ++GI GMGG+GK+TIA  V + +   FE   F  N R+ S
Sbjct: 13  IDVRVSKVESLLNMESPDVLIVGIWGMGGIGKSTIAEAVCNKVRSRFEGI-FFANCRQQS 71

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS-- 118
                   +      L  +   S  + F     +  RL+R KV +V+DDV +   L+   
Sbjct: 72  DLRRRFLKRLLGQETLNTMGSLSFRDSF-----VRDRLRRIKVFIVLDDVDNSMALEEWR 126

Query: 119 --LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
             L G    FG GS+++ITSRD+ +L ++ VDE YK  GLNY++A+QLFN KA K   P 
Sbjct: 127 DLLDGRNSSFGPGSKVLITSRDKQVL-SNIVDETYKVEGLNYEDAIQLFNSKALKICIPT 185

Query: 177 QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
            +   L  +I  +  G PLAL+VLGS L G+S++EWRS L++L  +P  +I   L+IS+D
Sbjct: 186 IDQRHLIEQIAWHVRGNPLALKVLGSSLYGKSIEEWRSALKKLAQDP--QIERALRISYD 243

Query: 237 GLQELEKKIFLDIACFFKGNDRDYVTNFLEGC-GFHPVIGIRVLIEKCLITVHNNTLWMH 295
           GL   +K IFLDIA FF     +  T  L+   G   +  I  LI+KCLIT   N + MH
Sbjct: 244 GLDSEQKSIFLDIAHFFNRMKPNEATRILDCLYGRSVIFDISTLIDKCLITTFYNNIRMH 303

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DLLQE+   IV+ +S +  G+RSRL    +V  VL E+ GT+ ++GI L  +    +++L
Sbjct: 304 DLLQEMAFNIVRAES-DFPGERSRLCHPPDVVQVLEENKGTQKIKGISLSTFMLSRQIHL 362

Query: 356 CASAKAFSKMTNLRLLKICNLQL---------PNGLEYLSNRLRLLGWRGYPLKFLPSNL 406
              + AF+ M  LR L      L         P GLEYL N+LR L W G+P K LP + 
Sbjct: 363 --KSDAFAMMDGLRFLNFRQHTLSMEDKMHLPPTGLEYLPNKLRYLKWCGFPSKSLPPSF 420

Query: 407 QMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
           + ++ +E+++C +++ +LW G++ +  L+ + LS S  L  +PD + A NL+ L L  C+
Sbjct: 421 RTERLVELHLCNNKLVKLWTGVQDVGNLRTIDLSDSPYLTELPDLSMAKNLQCLRLAKCS 480

Query: 467 RLYEIHPSLLLHNKLIILNMKDCTSLITLP---GKILMK--------------------- 502
            L E+  SL   +KL  +++  C +L + P    K+L K                     
Sbjct: 481 SLTEVPSSLQYLDKLEEIDLFSCYNLRSFPMLDSKVLRKLVISRCLDVTKCPTISQNMVW 540

Query: 503 -SLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPL 561
             LE+ ++K +P +++    L  L ++G  +  +FPEI   +E    L L+GT I+ +P 
Sbjct: 541 LQLEQTSIKEVPQSVTSK--LERLCLNGCPEITKFPEISGDIER---LELKGTTIKEVPS 595

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP-EIVRSMKDLSEL 620
           SI+ L+ L  L++  C  LE  P     +K L  L LS  + +KK P    + M  L  L
Sbjct: 596 SIQFLTRLRDLDMSGCSKLESFPEITGPMKSLVELNLSK-TGIKKIPSSSFKHMISLRRL 654

Query: 621 FLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSL-KTLNLSGCFKLENVP 679
            LDGT IKE+P   EL   L +L   DC +L  +  SII ++SL   L+ + CFKL+  P
Sbjct: 655 KLDGTPIKELP---ELPPSLWILTTHDCASLETV-ISIIKIRSLWDVLDFTNCFKLDQKP 710

Query: 680 ETLGQIESLEELDISGTAVPH 700
                   ++    SG  +PH
Sbjct: 711 LVAAMHLKIQ----SGDKIPH 727


>gi|357499913|ref|XP_003620245.1| Resistance protein [Medicago truncatula]
 gi|355495260|gb|AES76463.1| Resistance protein [Medicago truncatula]
          Length = 1607

 Score =  359 bits (922), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 290/837 (34%), Positives = 443/837 (52%), Gaps = 75/837 (8%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++ + + L  L++ GS D V M+GI GMGG+GKTT+A  VY+LI+HEF+AS FL+NVRE 
Sbjct: 185 LEHQKQHLTSLLNIGSDDTVHMVGIHGMGGIGKTTLALSVYNLIAHEFDASCFLENVREN 244

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
             K GL  LQ  +LS+++    N++  V  GI +L  RL++KK+LL++DDV + +QL++L
Sbjct: 245 HEKHGLPYLQNIILSKVVG-EKNALTGVRQGISILEQRLRQKKLLLILDDVNEQEQLKAL 303

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKT-YQPLQE 178
           AG  +WFG  SRIIIT+RD+ LL  HGV+  Y+  GLN  +A +L   KAFK  + P  E
Sbjct: 304 AGKHKWFGPSSRIIITTRDKKLLTCHGVEHTYEVRGLNAKDAFELVRWKAFKDEFSPSDE 363

Query: 179 CVQLSA-----RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
            V L+      R++ YA G PLALEV+GS  S +++++ +  L+R E  P  +I   LQI
Sbjct: 364 NVSLAQLHVIERVVAYASGHPLALEVMGSHFSNKTIEQCKDALDRYEKVPHKKIQTTLQI 423

Query: 234 SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIG-IRVLIEKCLITVHN-NT 291
           SFD L++ EK +FLDIAC FKG     V   L       V   I VL+EK LI ++    
Sbjct: 424 SFDALEDEEKFVFLDIACCFKGCKLTRVDEILHAHHGEIVKDHINVLVEKSLIKINEFGN 483

Query: 292 LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
           + +HDL++++G++IV+++SP++ GKR+RLW   ++  VL E+TGT  +E I  D +    
Sbjct: 484 VTLHDLVEDMGKEIVRQESPQDPGKRTRLWFSNDIMQVLEENTGTSQIEIIRFDCW---- 539

Query: 352 EVYLCASAKAFSKMTNLRLLKICN-LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK 410
              +    +AF KM NL+ L   + +      ++L N LR+L        FL +      
Sbjct: 540 -TTVAWDGEAFKKMENLKTLIFSDYVFFKKSPKHLPNSLRVLECHNPSSDFLVA------ 592

Query: 411 TIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYE 470
                     +  L    K+   ++V+ L     L+++P+ +G  NLEKL ++ C +L  
Sbjct: 593 ----------LSLLNFPTKNFQNMRVLNLEGGSGLVQIPNISGLSNLEKLSIKNCWKLIA 642

Query: 471 IHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGL-KCLS 523
           I  S+    KL IL + +C  + ++P  +++ SL +L+      L+S P  + G    L 
Sbjct: 643 IDKSVGFLGKLKILRLINCIEIQSIP-PLMLASLVELHLSGCNSLESFPPVLDGFGDKLK 701

Query: 524 TLDVSGDLKFREFPEIVEHMEHLSELHL-EGTAIRGLPLSIE-LLSGLVLLNLKNCRSLE 581
           T++V      R  P +   +  L  L L +  ++   PL ++  L  L  LN+K C  L 
Sbjct: 702 TMNVIYCKMLRSIPPL--KLNSLETLDLSQCYSLENFPLVVDAFLGKLKTLNVKGCCKLT 759

Query: 582 ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIEL-LTK 639
            +P     L  L +L LS C  L+ FP +V +   L +L  L+  S   + S   L L  
Sbjct: 760 SIPPL--KLNSLETLDLSQCYSLENFPLVVDAF--LGKLKTLNVESCHNLKSIQPLKLDS 815

Query: 640 LELLNLSDCKNLVRLPSSIIA-LKSLKTLNLSGCFKLENVPETLGQIESLEELDISG--- 695
           L  LNLS C NL   PS +   L  LKTL  + C  L+++P    ++ SLE LD S    
Sbjct: 816 LIYLNLSHCYNLENFPSVVDEFLGKLKTLCFAKCHNLKSIPPL--KLNSLETLDFSSCHR 873

Query: 696 --TAVPHSTSWYSYIPINLMRKSVALK-LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNL 752
             +  P    +   +   L+RK   LK +P L  L SL KL+L+ C  +E + P  +  L
Sbjct: 874 LESFPPVVDGFLGKLKTLLVRKCYNLKSIPPLK-LDSLEKLDLSCCCSLE-SFPCVVDGL 931

Query: 753 CSLKELYLSKNSFVSLPTSIT-------HLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
                  L K  F+++   I         L+ L    L  C  L+S P++   +R +
Sbjct: 932 -------LDKLKFLNIECCIMLRNIPRLRLTSLEYFNLSCCYSLESFPEILGEMRNI 981



 Score = 40.8 bits (94), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 102/258 (39%), Gaps = 44/258 (17%)

Query: 431  LDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL--LHNKLIILNMKD 488
            L KLK +++    NL  +P      +LEKL L  C  L E  P ++  L +KL  LN++ 
Sbjct: 885  LGKLKTLLVRKCYNLKSIPPLK-LDSLEKLDLSCCCSL-ESFPCVVDGLLDKLKFLNIEC 942

Query: 489  CTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSE 548
            C  L  +P ++ + SLE  NL           C  +L+         FPEI+  M ++  
Sbjct: 943  CIMLRNIP-RLRLTSLEYFNLS----------CCYSLE--------SFPEILGEMRNIPG 983

Query: 549  LHLEGTAIRGLPLSIELL------------------SGLVLLNLKNCRSLEILPVTVSNL 590
            L  + T I+ +P   + L                  S L    ++N   +  +  +    
Sbjct: 984  LLKDDTPIKEIPFPFKTLTQPQTLCDCGYVYLPNRMSTLAKFTIRNEEKVNAIQSSHVKY 1043

Query: 591  KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKN 650
             C+R +       L K   +  ++K   EL L       +P SIE    L  L L DC  
Sbjct: 1044 ICVRHVGYRSEEYLSKSLMLFANVK---ELHLTSNHFTVIPKSIENCQFLWKLILDDCTA 1100

Query: 651  LVRLPSSIIALKSLKTLN 668
            L  +      L+ L  LN
Sbjct: 1101 LKEIKGIPPCLRMLSALN 1118


>gi|227438197|gb|ACP30588.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1108

 Score =  359 bits (922), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 230/627 (36%), Positives = 338/627 (53%), Gaps = 44/627 (7%)

Query: 8   LRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVS 67
           L  L  S SS   ++G+ GM G+GKTTI+R ++   +  ++   FL +   +    GL  
Sbjct: 402 LSLLKFSQSSAPHIVGLWGMAGIGKTTISREIFRTQAERYDVCYFLPDFHIVCQTRGLSH 461

Query: 68  LQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFG 127
           L+ +  S +      ++      +  +  R   KKVL+V+D V + ++ + L G   WF 
Sbjct: 462 LRDEFFSIISGEEKVTVGACDTKLGFIRDRFLSKKVLIVLDGVSNAREAEFLLGGFGWFS 521

Query: 128 SGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARII 187
            G  +I+TSR+  +L      E+Y+   L+  E+L L     F + Q       L + ++
Sbjct: 522 GGHTLILTSRNRQVLIQCNAKEIYEIQNLSEHESLHL--CSQFVSEQIWTGRTPLVSELV 579

Query: 188 RYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFL 247
            YA G+PLAL  LGS L  + +D+ +  L+RL   P  EI D  + SF+ L   EK  FL
Sbjct: 580 YYASGIPLALCALGSSLQNQCIDDEKQHLKRLRQHPLVEIQDAFKRSFNVLDSNEKNTFL 639

Query: 248 DIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQ 307
           D ACFF+G ++D+V N L+GCGF   +GI  L+++ LI++  N +   ++ Q+ G+ +V 
Sbjct: 640 DFACFFRGGNKDHVVNILDGCGFLTELGIYGLLDESLISLVGNRIETPNIFQDAGRFVV- 698

Query: 308 RQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTN 367
           RQ   E GKRSRLW   ++  VLT ++GTE +EGI LD      E+    S  AF KM  
Sbjct: 699 RQENNERGKRSRLWDPTDIVDVLTNNSGTEAIEGIFLDASCLTFEL----SPTAFEKMYR 754

Query: 368 LRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           LRLLK+        C + LP GL  L + LRLL W  YPL  LP N      +E+ M YS
Sbjct: 755 LRLLKLYCPTSDNSCKVSLPQGLYSLPDELRLLHWERYPLGSLPRNFNPKNIVELNMPYS 814

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
            + +LWKG K+L+KLK +ILSHS  L + P  + A NLE + LEGCT L +++ S+  H 
Sbjct: 815 NMTKLWKGTKNLEKLKRIILSHSRQLTKFPSLSKAKNLEHIDLEGCTSLVKVNSSIRHHQ 874

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
           KL  L +KDC+ L ++P  + +++LE LNL       SG                E  ++
Sbjct: 875 KLTFLTLKDCSRLRSMPATVHLEALEVLNL-------SGCS--------------ELEDL 913

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
            +   +LSEL+L GTAI  +P SI  L+ LV L+L+NC  L+ LP  +SNLK + SL   
Sbjct: 914 QDFSPNLSELYLAGTAITEMPSSIGGLTRLVTLDLENCNELQHLPPEISNLKAVVSLS-- 971

Query: 600 GCSKLKKFPEIVRSMKDLSELFLDGTS 626
                 K P   +  +DLS  F+D  S
Sbjct: 972 -----AKRPASSKDSRDLSS-FVDMAS 992



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 6/174 (3%)

Query: 496 PGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-T 554
           P  I+  ++   N+  L      L+ L  + +S   +  +FP + +  ++L  + LEG T
Sbjct: 803 PKNIVELNMPYSNMTKLWKGTKNLEKLKRIILSHSRQLTKFPSLSK-AKNLEHIDLEGCT 861

Query: 555 AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
           ++  +  SI     L  L LK+C  L  +P TV +L+ L  L LSGCS+L+   +     
Sbjct: 862 SLVKVNSSIRHHQKLTFLTLKDCSRLRSMPATV-HLEALEVLNLSGCSELEDLQDF---S 917

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
            +LSEL+L GT+I E+PSSI  LT+L  L+L +C  L  LP  I  LK++ +L+
Sbjct: 918 PNLSELYLAGTAITEMPSSIGGLTRLVTLDLENCNELQHLPPEISNLKAVVSLS 971



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 114/238 (47%), Gaps = 19/238 (7%)

Query: 576 NCRSLEILPVTVSNLKCLRSLKL----SGCSKLKKFPEIVRSMKD-LSELFLDGTSIKEV 630
           +C + E+ P     +  LR LKL    S  S     P+ + S+ D L  L  +   +  +
Sbjct: 738 SCLTFELSPTAFEKMYRLRLLKLYCPTSDNSCKVSLPQGLYSLPDELRLLHWERYPLGSL 797

Query: 631 PSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEE 690
           P +      +EL N+    N+ +L      L+ LK + LS   +L   P +L + ++LE 
Sbjct: 798 PRNFNPKNIVEL-NMP-YSNMTKLWKGTKNLEKLKRIILSHSRQLTKFP-SLSKAKNLEH 854

Query: 691 LDISG----TAVPHSTSWYSYIPINLMRKSVALK-LPSLSGLCSLRKLNLTDCNLMEGAL 745
           +D+ G      V  S   +  +    ++    L+ +P+   L +L  LNL+ C+ +E   
Sbjct: 855 IDLEGCTSLVKVNSSIRHHQKLTFLTLKDCSRLRSMPATVHLEALEVLNLSGCSELE--- 911

Query: 746 PSDIGNLC-SLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
             D+ +   +L ELYL+  +   +P+SI  L++L+ ++LE+C  LQ LP    N++ V
Sbjct: 912 --DLQDFSPNLSELYLAGTAITEMPSSIGGLTRLVTLDLENCNELQHLPPEISNLKAV 967


>gi|297794745|ref|XP_002865257.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311092|gb|EFH41516.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1838

 Score =  359 bits (922), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 285/863 (33%), Positives = 440/863 (50%), Gaps = 134/863 (15%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
           +R +GI GM G+GKTT+A+  +D  S +F+AS F+++  ++  + GL    R L  Q LK
Sbjct: 164 IRCVGIWGMPGIGKTTLAKAFFDQKSGKFDASCFIEDFDKVIHEKGLY---RLLGKQFLK 220

Query: 79  LADNSIWNVFDGI-----DMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRII 133
                     DG+      ML  +L+ K+VL+V+DDV +    +S  G  +WFG  S II
Sbjct: 221 EKPP------DGVTTTKLSMLRYKLKNKRVLVVLDDVCNPLAAESFLGGFDWFGPESLII 274

Query: 134 ITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGL 193
           ITSRD+ + +   VD++Y+  GLN  E+L+L ++  F+  +  +   +LS ++I+YA G 
Sbjct: 275 ITSRDKQVFRLCQVDQIYEVQGLNEKESLKLISLYVFRNDKEERNLPELSMKVIKYASGH 334

Query: 194 PLALEVLGSFLSGRS--------------------VDEWRSTLER---------LEIEP- 223
           PLAL + G  L G+                      D ++S+ E+         L ++P 
Sbjct: 335 PLALNIYGRELKGKKNLSEMETALLRLKQRPPVQIFDAFKSSYEKKLSEMETALLRLKPR 394

Query: 224 -PSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEK 282
            P +I D  + S+D L + EK IFLDIACFF+G + DYV   LEGC F P +G+ VL++K
Sbjct: 395 LPFQIFDAFKSSYDTLNDSEKNIFLDIACFFRGENVDYVMQLLEGCDFFPHVGVDVLVDK 454

Query: 283 CLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLW---------KEEEVCHVLTES 333
            L+T   N L MH+L+Q++GQ+I+  ++   + +R RLW         ++ E    L  +
Sbjct: 455 GLVTFSENILQMHNLIQDVGQEIINGETI-YIERRRRLWEPWSIKYLLEDNEHKRTLKRA 513

Query: 334 TGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI-CN-------LQLPNG-LEY 384
            GTE VEGI LD      ++       AF  M NLRLLKI C+       +  P G L  
Sbjct: 514 QGTEDVEGIFLDT----TDISFDIKPAAFDNMLNLRLLKIFCSNPEINHVINFPKGSLHS 569

Query: 385 LSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSEN 444
           L N LRLL W  YPL+ LP        +EI M YS++ +LW G K+L+ L+ + L HS+ 
Sbjct: 570 LPNELRLLHWDNYPLQSLPQKFDPRHLVEINMPYSQLQKLWGGTKNLEMLRTIRLCHSQE 629

Query: 445 LIRMPDFTGAPNLEKLILEGCTRLYEIHPSL-LLHNKLIILNMKDCTSLITLPGKILMKS 503
           L+ + D + A NLE + L+GCTRL     +  LLH  L ++N+  C  + ++P       
Sbjct: 630 LVDVDDLSKAQNLEVIDLQGCTRLQSFPDTCQLLH--LRVVNLSGCLEIKSVP------- 680

Query: 504 LEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHL---SELHLEG-TAIRGL 559
                    P  I  L+   T  +   +  R   E+V   E      +L LE   +++  
Sbjct: 681 -------DFPPNIVTLRLKGTGIIKLPIAKRNGGELVSLSEFQGLSDDLKLERLKSLQES 733

Query: 560 PLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSE 619
            LS + L  L+ L+LK+C  L  LP  ++NL+ L+ L LSGCS+L       R++K   E
Sbjct: 734 SLSCQDLGKLICLDLKDCFLLRSLP-NMANLELLKVLDLSGCSRLNTIQSFPRNLK---E 789

Query: 620 LFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVP 679
           L+L GT++++V    +L   LELLN    + L  LP ++  L+ LK L+LSGC +L  + 
Sbjct: 790 LYLVGTAVRQVA---QLPQSLELLNAHGSR-LRSLP-NMANLELLKVLDLSGCSRLATIQ 844

Query: 680 ETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCN 739
                  +L+EL ++GTAV         +       S    L +++ L  L+ L+L+ C+
Sbjct: 845 SF---PRNLKELYLAGTAVRQVPQLPQSLEFMNAHGSRLRSLSNMANLELLKVLDLSGCS 901

Query: 740 LME--GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPP 797
            ++    LP +      LKEL ++  S                        ++ LPQLP 
Sbjct: 902 RLDTIKGLPRN------LKELDIAGTS------------------------VRGLPQLPQ 931

Query: 798 NIRQVRVNGCASLVTL-LDALKL 819
           ++  +  +GC SL ++ LD  KL
Sbjct: 932 SLELLNSHGCVSLTSIRLDFEKL 954



 Score =  146 bits (368), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 220/466 (47%), Gaps = 94/466 (20%)

Query: 225  SEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPV-IGIRVLIEKC 283
            +E+ ++ ++S+DGLQE+ K +FL IA  F   D   V   +       V  G++VL ++ 
Sbjct: 1201 NEVEEVPRVSYDGLQEMYKALFLYIAGLFNDEDARLVARLIAKIIDMDVSYGLKVLADRS 1260

Query: 284  LITVHNN-TLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGI 342
            LI V +N  + MH LL+++G++I+  +S                           ++ G 
Sbjct: 1261 LIRVSSNGEIVMHCLLRKMGKEILSSES---------------------------MLPGS 1293

Query: 343  VLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFL 402
            + D             A+ F            N+ + +   + S + RLL W  +P++ +
Sbjct: 1294 LKD------------LARDFE-----------NVSVASTQTWRSKKSRLLHWDAFPMRCM 1330

Query: 403  PSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
            PSN   +  +++ M  S++  LW G+K L+ LKVM L  S +L  +PD + A NLE+L L
Sbjct: 1331 PSNFHGESLVDLIMEASKLETLWSGLKLLNSLKVMSLRCSLDLREIPDLSLATNLERLDL 1390

Query: 463  EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCL 522
              C+ L  +  S+   +KL  L+M+ CT L  LP  I +KSL  LNL             
Sbjct: 1391 GHCSSLKMLPSSIGHLHKLKDLDMEFCTYLEALPTGINLKSLYYLNL------------- 1437

Query: 523  STLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEI 582
                 +G  + R FP+I     ++S+L+L+GTAI  +P  IE +S L  L++  C+ L+ 
Sbjct: 1438 -----NGCSQLRSFPQIS---TNISDLYLDGTAIEEVPTWIENISSLSYLSMNGCKKLKK 1489

Query: 583  LPVTVSNLKCLRSLKLSGCSKLKK----------FPEIVRSMKDLSELFLDGTSIKEVPS 632
            +   +S LK L  +  S C+ L +          F  I+R   D+S     G S K +P 
Sbjct: 1490 ISPNISKLKLLAEVDFSECTALTEDSWPNHPGGIFTSIMRV--DMS-----GNSFKSLPD 1542

Query: 633  SIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
            +   +   +L+  ++C+NL  LP       SL  L  + C  LEN+
Sbjct: 1543 TWTSIQPKDLI-FNNCRNLASLPE---LPASLSMLMANNCGSLENL 1584



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 193/438 (44%), Gaps = 101/438 (23%)

Query: 488  DCTSLITLPGKILMKSLEKLNLKS--LPTTISGLKCLSTLDVSG---DLKFREFPEI--V 540
            D   +  +P     +SL  L +++  L T  SGLK L++L V      L  RE P++   
Sbjct: 1323 DAFPMRCMPSNFHGESLVDLIMEASKLETLWSGLKLLNSLKVMSLRCSLDLREIPDLSLA 1382

Query: 541  EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
             ++E L   H   ++++ LP SI  L  L  L+++ C  LE LP  + NLK L  L L+G
Sbjct: 1383 TNLERLDLGHC--SSLKMLPSSIGHLHKLKDLDMEFCTYLEALPTGI-NLKSLYYLNLNG 1439

Query: 601  CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
            CS+L+ FP+I     ++S+L+LDGT+I+EVP+ IE        N+S              
Sbjct: 1440 CSQLRSFPQIS---TNISDLYLDGTAIEEVPTWIE--------NIS-------------- 1474

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK 720
              SL  L+++GC KL+ +   + +++ L E+D S        SW                
Sbjct: 1475 --SLSYLSMNGCKKLKKISPNISKLKLLAEVDFSECTALTEDSW---------------- 1516

Query: 721  LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLN 780
             P+  G                       G   S+  + +S NSF SLP + T +    +
Sbjct: 1517 -PNHPG-----------------------GIFTSIMRVDMSGNSFKSLPDTWTSIQP-KD 1551

Query: 781  IELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKS 840
            +   +C+ L SLP+LP ++  +  N C SL  L  +    +     I C           
Sbjct: 1552 LIFNNCRNLASLPELPASLSMLMANNCGSLENLNGSFDYPQMALQFINC----------- 1600

Query: 841  LAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYA 900
              FS+  +  E +  +    + ++PG E+P  F ++  GS +T+      Y  KK   + 
Sbjct: 1601 --FSLNHQARELILQSDCAYA-ILPGGELPAHFTHRAYGSVLTI------YLFKKFPTFK 1651

Query: 901  ICCVFHVLKNSRGNNCFG 918
             C    V+++  G+  FG
Sbjct: 1652 ACI---VVESRSGSFTFG 1666


>gi|359493225|ref|XP_002264620.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1448

 Score =  359 bits (922), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 228/621 (36%), Positives = 343/621 (55%), Gaps = 73/621 (11%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EKL+ +M++  + V +IGICG GG+GKTTIA  +Y+ IS+++++S FL N+RE  S+G  
Sbjct: 203 EKLKLMMNTELNKVSVIGICGPGGIGKTTIAEAIYNKISYQYDSSSFLRNIRE-KSQGDT 261

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
           + LQ +LL  +LK     I N+ +G+ M+   L  K+VL+++DDV D+KQL+ LA  ++W
Sbjct: 262 LQLQNELLHDILKEKGFKISNIDEGVTMIKRCLNSKRVLVILDDVDDLKQLKHLAEKKDW 321

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSAR 185
           F + S IIITSRD+ +L  +GVD  Y+    +  EA++LF++ AF+   P +    LS  
Sbjct: 322 FNAKSTIIITSRDKQVLARYGVDTPYEVQKFDKKEAIELFSLWAFQENLPKEAYENLSYN 381

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           +I YA GLPLAL++LG+ L G+ + EW S L +L+  P  EI  +L+ISFDGL +++K+I
Sbjct: 382 MIEYADGLPLALKLLGASLFGKKISEWESALYKLKRIPHMEINKVLRISFDGLDDMDKEI 441

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQI 305
           FLD+ACFFKG  +D+V+  L   G H   GI  L +KCLIT+  N + MHDL+Q++G++I
Sbjct: 442 FLDVACFFKGKSKDFVSRIL---GPHAEYGIATLNDKCLITISKNMMDMHDLIQQMGKEI 498

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKM 365
           ++++ P++LG+RSR+W + +   VLT + GT  ++G+ LD      +     + ++F +M
Sbjct: 499 IRQECPDDLGRRSRIW-DSDAYDVLTRNMGTRSIKGLFLDICKFPTQF----TKESFKQM 553

Query: 366 TNLRLLKI---------------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
             LRLLKI                         LP   E+ S  L    W GY L+ LP+
Sbjct: 554 DRLRLLKIHKDDEYGCISRFSRHLDGKLFSEDHLPRDFEFPSYELTYFHWDGYSLESLPT 613

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
           N      +E+ +  S I +LW+G K  +KL V+ LSHS +L  +PDF+  PNLE L L+G
Sbjct: 614 NFHAKDLVELILRGSNIKQLWRGNKLHNKLNVINLSHSVHLTEIPDFSSVPNLEILTLKG 673

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLST 524
           C +L  +   +     L  L+  DC+ L   P                            
Sbjct: 674 CVKLECLPRGIYKWKHLQTLSCGDCSKLKRFP---------------------------- 705

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIEL--LSGLVLLNLKNCRSLEI 582
                        EI  +M  L EL L GTAI  LP S     L  L +L+ + C  L  
Sbjct: 706 -------------EIKGNMRKLRELDLSGTAIEELPSSSSFGHLKALKILSFRGCSKLNK 752

Query: 583 LPVTVSNLKCLRSLKLSGCSK 603
           +P    +L       L+ CS+
Sbjct: 753 IPTDTLDLHGAFVQDLNQCSQ 773



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 132/353 (37%), Positives = 191/353 (54%), Gaps = 46/353 (13%)

Query: 551  LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI 610
             E + ++ LP+ IE    L  L L+ C+ L+ LP ++   K L +L   GCS+L+ FPEI
Sbjct: 983  FEDSDMKELPI-IENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEI 1041

Query: 611  VRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLS 670
            +  M+ L +L L G++IKE+PSSI+ L  L+ LNL+ CKNLV LP SI  L SLKTL + 
Sbjct: 1042 LEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIK 1101

Query: 671  GCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSL 730
             C +L+ +PE LG+++SLE L +                      S+  +LPSLSGLCSL
Sbjct: 1102 SCPELKKLPENLGRLQSLEILYVKDF------------------DSMNCQLPSLSGLCSL 1143

Query: 731  RKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQ 790
            R L L +C L E  +PS I +L SL+ L L  N F S P  I+ L KL+ + L  CK LQ
Sbjct: 1144 RILRLINCGLRE--IPSGICHLTSLQCLVLMGNQFSSKPDGISQLHKLIVLNLSHCKLLQ 1201

Query: 791  SLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYL 850
             +P+ P N+  +  + C SL          K  S+++                S +++++
Sbjct: 1202 HIPEPPSNLITLVAHQCTSL----------KISSSLLW----------SPFFKSGIQKFV 1241

Query: 851  EAVSNTRQHLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
              V    + L   +P S  IPEW  +Q +GS IT+T P N Y     +G+A+C
Sbjct: 1242 PGV----KLLDTFIPESNGIPEWISHQKKGSKITLTLPQNWYENDDFLGFALC 1290



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 509  LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSG 568
            LKSLP++I   K L+TL   G  +   FPEI+E ME L +L L G+AI+ +P SI+ L G
Sbjct: 1011 LKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAIKEIPSSIQRLRG 1070

Query: 569  LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSI 627
            L  LNL  C++L  LP ++ NL  L++L +  C +LKK PE +  ++ L  L++ D  S+
Sbjct: 1071 LQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPENLGRLQSLEILYVKDFDSM 1130

Query: 628  KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
                 S+  L  L +L L +C  L  +PS I  L SL+ L L G  +  + P+ + Q+  
Sbjct: 1131 NCQLPSLSGLCSLRILRLINC-GLREIPSGICHLTSLQCLVLMG-NQFSSKPDGISQLHK 1188

Query: 688  LEELDIS 694
            L  L++S
Sbjct: 1189 LIVLNLS 1195



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 2/109 (1%)

Query: 566 LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT 625
           +  L +L LK C  LE LP  +   K L++L    CSKLK+FPEI  +M+ L EL L GT
Sbjct: 663 VPNLEILTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRKLRELDLSGT 722

Query: 626 SIKEVPSSIEL--LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC 672
           +I+E+PSS     L  L++L+   C  L ++P+  + L      +L+ C
Sbjct: 723 AIEELPSSSSFGHLKALKILSFRGCSKLNKIPTDTLDLHGAFVQDLNQC 771



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 117/298 (39%), Gaps = 96/298 (32%)

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
           KDL EL L G++IK++    +L  KL ++NLS   +L  +P    ++ +L+ L L GC K
Sbjct: 618 KDLVELILRGSNIKQLWRGNKLHNKLNVINLSHSVHLTEIPD-FSSVPNLEILTLKGCVK 676

Query: 675 LENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLN 734
           LE +P  + + + L+ L                                  G CS  K  
Sbjct: 677 LECLPRGIYKWKHLQTLSC--------------------------------GDCSKLK-- 702

Query: 735 LTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSIT--HLSKLLNIELEDCKRLQSL 792
                      P   GN+  L+EL LS  +   LP+S +  HL  L  +    C +L  +
Sbjct: 703 ---------RFPEIKGNMRKLRELDLSGTAIEELPSSSSFGHLKALKILSFRGCSKLNKI 753

Query: 793 PQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSM-LREYLE 851
           P                                     D+L L G    AF   L +  +
Sbjct: 754 PT------------------------------------DTLDLHG----AFVQDLNQCSQ 773

Query: 852 AVSNTRQH---LSVVVPG-SEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
             +++  H   + +V+PG S +PEW M +      T+  P N +   + +G+AICCV+
Sbjct: 774 NCNDSAYHGNGICIVLPGHSGVPEWMMERR-----TIELPQNWHQDNEFLGFAICCVY 826



 Score = 46.6 bits (109), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 24/189 (12%)

Query: 419  SRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPNLEKLILEGCTRLYEIHPSLLL 477
            S I E+   I+ L  L+ + L++ +NL+ +P+      +L+ L ++ C  L ++  +L  
Sbjct: 1056 SAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPENLGR 1115

Query: 478  HNKLIILNMKDCTSL-ITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
               L IL +KD  S+   LP                  ++SGL  L  L +  +   RE 
Sbjct: 1116 LQSLEILYVKDFDSMNCQLP------------------SLSGLCSLRILRLI-NCGLREI 1156

Query: 537  PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
            P  + H+  L  L L G      P  I  L  L++LNL +C+ L+ +P   SNL  L + 
Sbjct: 1157 PSGICHLTSLQCLVLMGNQFSSKPDGISQLHKLIVLNLSHCKLLQHIPEPPSNLITLVAH 1216

Query: 597  KLSGCSKLK 605
            +   C+ LK
Sbjct: 1217 Q---CTSLK 1222


>gi|357513281|ref|XP_003626929.1| TMV resistance protein N [Medicago truncatula]
 gi|355520951|gb|AET01405.1| TMV resistance protein N [Medicago truncatula]
          Length = 1071

 Score =  359 bits (922), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 215/568 (37%), Positives = 338/568 (59%), Gaps = 30/568 (5%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEA-SGFLDNVREI 59
           +DSR +++   +D  S++V MIGI GMGG GKTT A+ +Y+ I   F+  + F++++RE+
Sbjct: 188 LDSRVQQITKFIDHQSTEVCMIGIWGMGGSGKTTTAKAIYNQIRSRFKGRASFIESIREV 247

Query: 60  --SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
             ++  G++ LQ+QLL  LLK+    I ++  GI  +  RL+ + V +++DDV   +QL+
Sbjct: 248 CDNNNRGVIPLQQQLLLDLLKIK-QEIHSIASGITKIEKRLRGQTVFVILDDVTTSEQLK 306

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
           +L  + + FGSGS +IIT+RD  LLK+   D ++    ++ D++L+LF   AF+   P  
Sbjct: 307 NLCADPKLFGSGSVLIITTRDGRLLKSLSGDHIFTMTEMDEDQSLELFCWHAFQKPYPRY 366

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
              +L+  ++ Y GGLPLALEVLGS+LS R+  EWRS L +LE  P +E+  IL+IS+DG
Sbjct: 367 SFSELTKNVVGYCGGLPLALEVLGSYLSKRTTREWRSALSKLEKIPNNEVQQILRISYDG 426

Query: 238 LQEL-EKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMH 295
           LQ+  +K IFLDI CF  G +R  VT  L  CG H  IGI +LIE+ L+ V  NN L MH
Sbjct: 427 LQDYTQKDIFLDICCFLIGKNRADVTEILNACGLHADIGISILIERSLLKVEKNNKLGMH 486

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DLL+++G+ I    S +++    RLW  ++V HVL++ TGT  + G++L  Y     +  
Sbjct: 487 DLLRDMGRAIAGESSIKDM----RLWFHDDVLHVLSKKTGTYTIVGMIL-KYQRTGRIIF 541

Query: 356 CASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
                +  +M  LRLLK+  + L      +S +LR + W+    KF+P++  ++  +   
Sbjct: 542 --GTDSLQEMQKLRLLKLDGVHLMGEYGLISKQLRWVDWQRSAFKFIPNDFDLENLVVFE 599

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           + +S + ++W+  K LDKLK++ +SH++ L   PDF+  PNLEKLI++ C  L E+H S+
Sbjct: 600 LKHSNLRQVWQETKILDKLKILNVSHNKYLKITPDFSKLPNLEKLIMKDCPSLSEVHQSI 659

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
                L+++N++DCTSL  LP +I                   LK + TL +SG  K  +
Sbjct: 660 GDLKSLVLINLRDCTSLANLPREIYQ-----------------LKSVKTLIISGCSKIDK 702

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSI 563
             E +  ME L+ L    T ++ +P SI
Sbjct: 703 LEEDILQMESLTTLIAANTGVKQVPFSI 730



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 126/497 (25%), Positives = 208/497 (41%), Gaps = 74/497 (14%)

Query: 544  EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            + L  +  + +A + +P   +L   LV+  LK+    ++   T   L  L+ L +S    
Sbjct: 571  KQLRWVDWQRSAFKFIPNDFDL-ENLVVFELKHSNLRQVWQET-KILDKLKILNVSHNKY 628

Query: 604  LKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
            LK  P+  + + +L +L + D  S+ EV  SI  L  L L+NL DC +L  LP  I  LK
Sbjct: 629  LKITPDFSK-LPNLEKLIMKDCPSLSEVHQSIGDLKSLVLINLRDCTSLANLPREIYQLK 687

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMR-KSVA-LK 720
            S+KTL +SGC K++ + E + Q+ESL  L  + T V         +P +++R KS+A + 
Sbjct: 688  SVKTLIISGCSKIDKLEEDILQMESLTTLIAANTGVKQ-------VPFSIVRSKSIAYIS 740

Query: 721  LPSLSGLCS-------LRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSIT 773
            L    GL S          ++ T  +L    +    GN  SL  L+   N+       +T
Sbjct: 741  LCGYKGLSSDVFPSLIWSWMSPTRNSL--SRISPFAGNSLSLVSLHAESNNMDYQSPMLT 798

Query: 774  HLSKLLNIELEDCKRLQSLPQ---------LPPNIRQVRVNGCASLVTLLDALKLCKSDS 824
             LSKL  +  + C+    L Q            N  ++        +T L    +     
Sbjct: 799  VLSKLRCVWFQ-CQSENQLTQELRRFIDDLYDVNFTELETTSHGHQITNLSLKSIVIGMG 857

Query: 825  TMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
            +    +D+L    +KSLA  +      A +++   L    PG   P W  Y+ EG S+  
Sbjct: 858  SSQIVMDTL----DKSLAQGL------ATNSSDSFL----PGDNYPYWLAYKCEGPSVHF 903

Query: 885  TRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQ 944
              P +  +   + G A+C V+ +   +    C     T  L  +       I  RD    
Sbjct: 904  EVPED--SGSCMKGIALCVVYSLTPQNLPIECI----TSVLIINYTKLTIQIYKRDTI-M 956

Query: 945  AGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMD 1004
            + +D  W   +S        L ++ N+E F +          +G GL VK   ++ +Y  
Sbjct: 957  SFNDEDWEGVVS-------NLKVDDNVEIFVA----------IGHGLTVKETAVYLIYGQ 999

Query: 1005 ----EVEELDQTTNQPS 1017
                E+E + +   QPS
Sbjct: 1000 PAAMEIEPIPEVEVQPS 1016


>gi|356499338|ref|XP_003518498.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1724

 Score =  359 bits (921), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 252/691 (36%), Positives = 391/691 (56%), Gaps = 38/691 (5%)

Query: 4   RCEKLRFLMDSGSSD--VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS 61
           R E++  L+D    D  VRM+G+ G+GG+GKT +A+ +YD I   F+A+ FL +VRE  +
Sbjct: 199 RVEEVMSLLDMKPYDETVRMLGVWGLGGVGKTELAKALYDNIVQSFDAASFLADVREKLN 258

Query: 62  K-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           K  GL  LQ+ LLS++ +  D  + +   G+  +  +L+ KKVLLV+DDV D  +L+ LA
Sbjct: 259 KINGLEDLQKTLLSEMREELDTELGSAIKGMFEIKRKLKGKKVLLVLDDVDDKDKLEKLA 318

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G R+WFGSGSRIIIT+RD+ +L  H VD +Y+   L+   +L+LF   AFK   P     
Sbjct: 319 GGRDWFGSGSRIIITTRDKDVLIAHQVDNIYQMEELDKHHSLELFCWNAFKQSHPKTGFE 378

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSG---RSVDEWRSTLERLEIEPPSEILDILQISFDG 237
            +S R I  A GLPLAL+V+GS L+     S+++W+  LE  E  PP  ILD+L+ S+D 
Sbjct: 379 DVSLRAIYVAKGLPLALKVIGSDLATLDEESLEDWKCALEEYERTPPERILDVLKKSYDR 438

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDL 297
           L    K++FLDIACFFKG  ++YV N L+  G      I VL++K L+T+ +  L MHDL
Sbjct: 439 LGSKPKQVFLDIACFFKGEKKEYVENILDDIG-AITYNINVLVKKSLLTIEDGCLKMHDL 497

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           +Q++G+ IV+++ P+  G+RSRLW  E+V  +LT+  G+  ++GI+LD    E   +   
Sbjct: 498 IQDMGRVIVRQEEPDNPGERSRLWYYEDVIEILTDDLGSNKIQGIMLDPPQREEVDW--- 554

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
           S  AF KM  LR+L + N    +  E+L N LR+L W  YP K  PS     K +     
Sbjct: 555 SGTAFEKMKRLRILIVRNTSFSSEPEHLPNHLRVLDWIEYPSKSFPSKFYPKKIVVFNFP 614

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
            S +  L +  K    L  M  S+++++  +PD +G  NL +L L+ C  L  +H S+  
Sbjct: 615 RSHLT-LEEPFKKFPCLTNMDFSYNQSITEVPDVSGVENLRQLRLDQCKNLTTVHESVGF 673

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
             KL  L+   CT+L     K+ + SL+                   LD++  +    FP
Sbjct: 674 LKKLAHLSASGCTNLRNFLLKMFLPSLK------------------VLDLNLCIMLEHFP 715

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
           +I++ M+   ++++  TAI+ +P SI  L+GLV L++ N + L+ LP +V  L  + + K
Sbjct: 716 DIMKEMKEPLKIYMINTAIKEMPESIGNLTGLVCLDISNSKELKYLPSSVFMLPNVVAFK 775

Query: 598 LSGCSKLKK------FPEIVRSMKDLSELFLDGTSI--KEVPSSIELLTKLELLNLSDCK 649
           + GCS+LKK       P        L  L ++   +  +++ + +    KLE+L ++   
Sbjct: 776 IGGCSQLKKSFKSLQSPSTANVRPTLRTLHIENGGLLDEDLLAILNCFPKLEVL-IASKN 834

Query: 650 NLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
           N V LP+ I     L +L++S C+KL+ +PE
Sbjct: 835 NFVSLPACIKECVHLTSLDVSACWKLQKIPE 865



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 175/387 (45%), Gaps = 63/387 (16%)

Query: 496 PGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTA 555
           P KI++ +  + +L +L        CL+ +D S +    E P+ V  +E+L +L L+   
Sbjct: 605 PKKIVVFNFPRSHL-TLEEPFKKFPCLTNMDFSYNQSITEVPD-VSGVENLRQLRLDQCK 662

Query: 556 -IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
            +  +  S+  L  L  L+   C +L    + +  L  L+ L L+ C  L+ FP+I++ M
Sbjct: 663 NLTTVHESVGFLKKLAHLSASGCTNLRNFLLKMF-LPSLKVLDLNLCIMLEHFPDIMKEM 721

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
           K+  ++++  T+IKE+P SI  LT L  L++S+ K L  LPSS+  L ++    + GC +
Sbjct: 722 KEPLKIYMINTAIKEMPESIGNLTGLVCLDISNSKELKYLPSSVFMLPNVVAFKIGGCSQ 781

Query: 675 LENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLN 734
           L+         +S + L    TA    T                           LR L+
Sbjct: 782 LK---------KSFKSLQSPSTANVRPT---------------------------LRTLH 805

Query: 735 LTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ 794
           + +  L++  L + +     L+ L  SKN+FVSLP  I     L ++++  C +LQ +P+
Sbjct: 806 IENGGLLDEDLLAILNCFPKLEVLIASKNNFVSLPACIKECVHLTSLDVSACWKLQKIPE 865

Query: 795 LPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVS 854
              N+R + VNGC  L                I+ L S     +    FS+ RE  + + 
Sbjct: 866 C-TNLRILNVNGCKGL--------------EQISELPSAIQKVDARYCFSLTRETSDMLC 910

Query: 855 NTRQH----LSVVVPGSE----IPEWF 873
              +     L VV+P  +    IPEWF
Sbjct: 911 FQAKKGICGLEVVMPMPKKQVVIPEWF 937


>gi|356514917|ref|XP_003526148.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1106

 Score =  358 bits (920), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 256/699 (36%), Positives = 383/699 (54%), Gaps = 57/699 (8%)

Query: 1   MDSRCEKLRFLMDSGS-SDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           M+S   KL  L+  G  +DVR++GI GMGG+GK+T+ R +Y+ IS+ F +S ++D++ ++
Sbjct: 206 MESHFAKLSKLICLGPVNDVRVVGITGMGGIGKSTLGRALYERISYRFNSSCYIDDISKL 265

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
               G + +Q+QLLSQ LK  +  I NV DG  +  +RL     L+V+D+V   KQL   
Sbjct: 266 YGLEGPLGVQKQLLSQSLKERNLEICNVSDGTILAWNRLANANALIVLDNVDQDKQLDMF 325

Query: 120 AGNR-----EWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
            G+R     +  G GS III SRD+ +LK HGVD +Y+   LN ++AL+LF  K FK   
Sbjct: 326 TGSRNDLLRKRLGKGSIIIIISRDQQILKAHGVDVIYQVKPLNDNDALRLFCKKVFKNNY 385

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
            + +  +L+  ++ +  G PLA+EV+GS L  + V  WRS L  L       I+++L+IS
Sbjct: 386 IMSDFEKLTYDVLSHCKGHPLAIEVVGSSLFDKDVLHWRSALTWLRENKSKSIMNVLRIS 445

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
           FD L++  K+IFLDIACFF  +  +YV   L+  GF+P  G+ VL++K LIT+ +  + M
Sbjct: 446 FDQLEDTHKEIFLDIACFFNNDMVEYVKEVLDFRGFNPESGLLVLVDKSLITMDSRVIRM 505

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           HDLL +LG+ IV+ +SP +  K SRLW  ++   V +++   E VE IVL     ++ + 
Sbjct: 506 HDLLCDLGKYIVREKSPRKPWKWSRLWDVKDFLKVKSDNKAAENVEAIVLSK---KSVIL 562

Query: 355 LCASAKAFSKMTNLRLLKI------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQM 408
                 A S M++L+LLK         +     L  LSN L  L W  YP + LP + + 
Sbjct: 563 QTMRIDALSTMSSLKLLKFGYKNVGFQINFSGTLAKLSNELGYLSWIKYPFECLPPSFEP 622

Query: 409 DKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
           DK +E+ + YS I +LW+G K L  L+ + L  S+NLI+MP    A  LE L LEGC +L
Sbjct: 623 DKLVELRLPYSNIKQLWEGTKPLPNLRRLDLFGSKNLIKMPYIEDALYLESLNLEGCIQL 682

Query: 469 YEIHPSLLLHNKLIILNMKDCTSLITLP--------GKI----------------LMKSL 504
            EI  S++L  KL  LN+++C SLI LP        GK+                L+K L
Sbjct: 683 EEIGLSIVLSPKLTSLNLRNCKSLIKLPRFGEDLILGKLVLEGCRKLRHIDPSIGLLKKL 742

Query: 505 EKLNLK------SLPTTISGLKCLSTLDVSGDLKFREFPEIVE--HMEHLSELHLEGTAI 556
            +LNLK      SLP +I GL  L  L++SG  K      + E    E L ++  +G  I
Sbjct: 743 RELNLKNCKNLVSLPNSILGLNSLQYLNLSGCSKVYNTELLYELRDAEQLKKIDKDGAPI 802

Query: 557 RGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKD 616
                S +        + ++ +S+  L  +    +C+R L LS C+ L + P+ +  M  
Sbjct: 803 HFQSTSSD--------SRQHKKSVSCLMPSSPIFQCMRELDLSFCN-LVEIPDAIGIMSC 853

Query: 617 LSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           L  L L G +   +P +++ L+KL  L L  CK L  LP
Sbjct: 854 LERLDLSGNNFATLP-NLKKLSKLVCLKLQHCKQLKSLP 891



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 169/538 (31%), Positives = 247/538 (45%), Gaps = 89/538 (16%)

Query: 496  PGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-T 554
            P K++   L   N+K L      L  L  LD+ G     + P I E   +L  L+LEG  
Sbjct: 622  PDKLVELRLPYSNIKQLWEGTKPLPNLRRLDLFGSKNLIKMPYI-EDALYLESLNLEGCI 680

Query: 555  AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
             +  + LSI L   L  LNL+NC+SL  LP    +L  L  L L GC KL+         
Sbjct: 681  QLEEIGLSIVLSPKLTSLNLRNCKSLIKLPRFGEDL-ILGKLVLEGCRKLR--------- 730

Query: 615  KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
                           +  SI LL KL  LNL +CKNLV LP+SI+ L SL+ LNLSGC K
Sbjct: 731  --------------HIDPSIGLLKKLRELNLKNCKNLVSLPNSILGLNSLQYLNLSGCSK 776

Query: 675  LENVP--ETLGQIESLEELDISGTAVP-HSTSWYSYIPINLMRKSVALKLPSLSGLCSLR 731
            + N      L   E L+++D  G  +   STS  S       +KSV+  +PS      +R
Sbjct: 777  VYNTELLYELRDAEQLKKIDKDGAPIHFQSTSSDS----RQHKKSVSCLMPSSPIFQCMR 832

Query: 732  KLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQS 791
            +L+L+ CNL+E  +P  IG +  L+ L LS N+F +LP ++  LSKL+ ++L+ CK+L+S
Sbjct: 833  ELDLSFCNLVE--IPDAIGIMSCLERLDLSGNNFATLP-NLKKLSKLVCLKLQHCKQLKS 889

Query: 792  LPQLPPNIR---QVRVNGCASLVTLLDALKLCKSDS-TMIACLDSLKLLGNKSLAFSMLR 847
            LP+LP  I         G  + + + +  KL   +  T +A    ++L     + FS+  
Sbjct: 890  LPELPSRIEIPTPAGYFGNKAGLYIFNCPKLVDRERCTNMAFSWMMQLCSQVCILFSLW- 948

Query: 848  EYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHV 907
                       H   V PGSEIP WF  ++EG+ +++   S + + +  +G A C +F V
Sbjct: 949  ---------YYHFGGVTPGSEIPRWFNNEHEGNCVSLD-ASPVMHDRNWIGVAFCAIFVV 998

Query: 908  ---------LKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAG-------SDHLW 951
                       NS+G       P H         ++G    D +G          SDH+ 
Sbjct: 999  PHETLLAMGFSNSKG-------PRH---------LFGDIRVDFYGDVDLELVLDKSDHMC 1042

Query: 952  LLYLSRQ-TCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEE 1008
            L +L R     D  L     L  + S +  V  E +     EVK  G   VY  ++E+
Sbjct: 1043 LFFLKRHDIIADFHLK-HRYLGRWVSRYDGVLKESY----AEVKKYGYRWVYKGDIEQ 1095


>gi|237769813|dbj|BAH59425.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 1373

 Score =  358 bits (920), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 261/711 (36%), Positives = 392/711 (55%), Gaps = 69/711 (9%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
           +R +GI GM G+GKTT+A+ V+D +S  F+AS F+++  +   + GL  L   L  QLL 
Sbjct: 172 IRCVGIWGMPGIGKTTLAKAVFDQMSSAFDASCFIEDYDKSIHEKGLYCL---LEEQLLP 228

Query: 79  LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
             D +I      ++ L  RL  K+VL+V+DDV +    +S     +W G GS IIITSRD
Sbjct: 229 GNDATIMK----LNSLRDRLNSKRVLVVLDDVCNALVAESFLEGFDWLGPGSLIIITSRD 284

Query: 139 EHLLKTHGVDEVYKPHGLNYDEALQLFNMKA-FKTYQPLQECVQLSARIIRYAGGLPLAL 197
           + + +  G++++Y+  GLN  EA QLF + A  K     Q   +LS R+I YA G PLA+
Sbjct: 285 KQVFRLCGINQIYEVQGLNEKEARQLFLLSASIKEDMGEQNLHELSVRVISYANGNPLAI 344

Query: 198 EVLGSFLSGRS-VDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGN 256
            V G  L G+  + E  +   +L+  PP +I+D  + S+D L + EK IFLDIACFF+G 
Sbjct: 345 SVYGRELKGKKKLSEMETAFLKLKRRPPFKIVDAFKSSYDTLSDNEKNIFLDIACFFQGE 404

Query: 257 DRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGK 316
           + +YV   LEGCGF P + I VL++KCL+T+  N +W+H L Q++G++I+  ++  ++ +
Sbjct: 405 NVNYVIQLLEGCGFFPHVEIDVLVDKCLVTISENRVWLHKLTQDIGREIINGETV-QIER 463

Query: 317 RSRLWKEEEVCHVL---------------TESTGTELVEGIVLDNYHHENEVYLCASAKA 361
           R RLW+   + ++L                 + G+E +EG+ LD     + +       A
Sbjct: 464 RRRLWEPWSIKYLLEYNEHKANGEPKTTFKRAQGSEEIEGLFLDT----SNLRFDLQPSA 519

Query: 362 FSKMTNLRLLKI-CN-------LQLPNG-LEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
           F  M NLRLLKI C+       +  P G L  L N LRLL W  YPLK LP N      +
Sbjct: 520 FKNMLNLRLLKIYCSNPEVHPVINFPTGSLHSLPNELRLLHWENYPLKSLPQNFDPRHLV 579

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
           EI M YS++ +LW G K+L+ L+ + L HS++L+ + D   A NLE + L+GCTRL    
Sbjct: 580 EINMPYSQLQKLWGGTKNLEMLRTIRLCHSQHLVDIDDLLKAENLEVIDLQGCTRLQNF- 638

Query: 473 PSLLLHNKLIILNMKDC---TSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG 529
           P+     +L ++N+  C    S++ +P  I     EKL+L+      +G+  L    V  
Sbjct: 639 PAAGRLLRLRVVNLSGCIKIKSVLEIPPNI-----EKLHLQG-----TGILALPVSTVKP 688

Query: 530 DLKFREFPEIVEHMEHLSEL-HLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
           +   RE    +  +  LSE   LE  T++     S + L  L+ L LK+C  L+ LP  +
Sbjct: 689 N--HRELVNFLTEIPGLSEASKLERLTSLLESNSSCQDLGKLICLELKDCSCLQSLP-NM 745

Query: 588 SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
           +NL  L  L LSGCS L       R +K   +L+L GT+I+EVP   +L   LE+LN + 
Sbjct: 746 ANLD-LNVLDLSGCSSLNSIQGFPRFLK---QLYLGGTAIREVP---QLPQSLEILN-AH 797

Query: 648 CKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
              L  LP ++  L+ LK L+LSGC +LE +    G   +L+EL  +GT +
Sbjct: 798 GSCLRSLP-NMANLEFLKVLDLSGCSELETIQ---GFPRNLKELYFAGTTL 844



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 52/83 (62%), Gaps = 1/83 (1%)

Query: 229  DILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH 288
            ++L++S+D LQE++K +FL IA  F   D D+V   + G       G++VL +  LI+V 
Sbjct: 1087 EVLRVSYDDLQEMDKVLFLYIASLFNDEDVDFVAPLIAGIDLDVSSGLKVLADVSLISVS 1146

Query: 289  NN-TLWMHDLLQELGQQIVQRQS 310
            +N  + MH L +++G++I+  QS
Sbjct: 1147 SNGEIVMHSLQRQMGKEILHGQS 1169



 Score = 45.1 bits (105), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 111/266 (41%), Gaps = 61/266 (22%)

Query: 549 LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
           LH E   ++ LP + +    LV +N+   + L+ L     NL+ LR+++L     L    
Sbjct: 559 LHWENYPLKSLPQNFDP-RHLVEINMPYSQ-LQKLWGGTKNLEMLRTIRLCHSQHLVDID 616

Query: 609 EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
           +++++                          LE+++L  C  L   P++   L+ L+ +N
Sbjct: 617 DLLKA------------------------ENLEVIDLQGCTRLQNFPAAGRLLR-LRVVN 651

Query: 669 LSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLC 728
           LSGC K+++V E    IE L        A+P ST      P +    +   ++P LS   
Sbjct: 652 LSGCIKIKSVLEIPPNIEKLHLQGTGILALPVST----VKPNHRELVNFLTEIPGLSEAS 707

Query: 729 SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKR 788
            L +L                              S +   +S   L KL+ +EL+DC  
Sbjct: 708 KLERL-----------------------------TSLLESNSSCQDLGKLICLELKDCSC 738

Query: 789 LQSLPQLPP-NIRQVRVNGCASLVTL 813
           LQSLP +   ++  + ++GC+SL ++
Sbjct: 739 LQSLPNMANLDLNVLDLSGCSSLNSI 764


>gi|227438287|gb|ACP30633.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1207

 Score =  358 bits (919), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 256/715 (35%), Positives = 377/715 (52%), Gaps = 84/715 (11%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGI 91
           KTT+A  +Y+ +   F+   FL N+RE S + G+ SLQ++L S LL              
Sbjct: 216 KTTLADCLYERMRGMFDGCCFLANIRENSGRSGIESLQKELFSTLLDDRYLKTGAPASAH 275

Query: 92  DMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVY 151
                RL+ K++L+V+DDV D KQ++ L G+ +W+  GSRIIIT+RD  L+K     + Y
Sbjct: 276 QRFHRRLKSKRLLIVLDDVNDEKQIKYLMGHCKWYQGGSRIIITTRDSKLIKG----QKY 331

Query: 152 KPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDE 211
               LN  EAL+LF + AF    PL+E   L+   + YA G PLAL+VLGS L   +   
Sbjct: 332 VLPKLNDREALKLFCLNAFAGSCPLKEFEGLTNMFLDYARGHPLALKVLGSDLRDMNKLF 391

Query: 212 WRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFH 271
           W + L+ L+ +   +I ++L+ S++ L   +K IFLDIACFF+    DYVT+ L   G  
Sbjct: 392 WEAKLDLLKSKSHGDIYEVLETSYEELSNDQKDIFLDIACFFRSEKVDYVTSLLSSRGVD 451

Query: 272 PVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRS------------- 318
               I+ L++KCLIT  +N + MHD+LQ +G++I  +  PE +G R              
Sbjct: 452 VSSLIQDLVDKCLITRSDNRIEMHDMLQTMGKEISFK--PEPIGIRDVRWLSKHRPQHHW 509

Query: 319 --RLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNL 376
             RLW  E++C +LT+  GTE + GI LD         L     AF  M NL+ LKI + 
Sbjct: 510 HLRLWDSEDICDMLTKGLGTEKIRGIFLDTSKRGK---LRLRPDAFKGMYNLKYLKIYDS 566

Query: 377 QLP-----------NGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELW 425
           +              GL++L + L  L W G+PL+  P +      +++ + +S + E+W
Sbjct: 567 RCSRGCEAVFKLHFKGLDFLPDELAYLHWHGFPLQRFPLDFDPKNLVDLKLPHSELEEIW 626

Query: 426 KGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILN 485
              K    LK + LSHS NL R+     A NLE+L LEGCT L  +  S+    KL+ LN
Sbjct: 627 GDDKVAGMLKWVDLSHSSNLCRLLGLAKAHNLERLNLEGCTSLKMLPSSINCLEKLVYLN 686

Query: 486 MKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEH 545
           +++CTSL +LP +   +SL+                  TL +SG    ++FP I E +E 
Sbjct: 687 LRECTSLKSLPEETKSQSLQ------------------TLILSGCSSLKKFPLISESIE- 727

Query: 546 LSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
              L L+GTAI+ LP SIE  S L  LNLKNC+ L+ L   +  LKCL+ L LSGCS+L+
Sbjct: 728 --VLLLDGTAIKSLPDSIETSSKLASLNLKNCKRLKHLSSNLYKLKCLQELILSGCSQLE 785

Query: 606 KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNL--SDCKNLVRL--PSSIIAL 661
            FPEI   M+ L  L LD TSI E+P +++ L+ ++  +L  ++C+  VR+   S  +  
Sbjct: 786 VFPEIKEDMESLEILLLDDTSITEMP-NMKHLSNIKTFSLCGTNCEVSVRVLFLSPPLGC 844

Query: 662 KSLKTLNLSGCF-----------------------KLENVPETLGQIESLEELDI 693
             L  L LS C                         +EN+PE+  Q+ +L+  D+
Sbjct: 845 SRLTDLYLSRCSLYRIPNISGNGLSSLQSLCLSGNSIENLPESFNQLHNLKWFDL 899



 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 166/510 (32%), Positives = 246/510 (48%), Gaps = 61/510 (11%)

Query: 545  HLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            +L  L+LEG T+++ LP SI  L  LV LNL+ C SL+ LP    + + L++L LSGCS 
Sbjct: 657  NLERLNLEGCTSLKMLPSSINCLEKLVYLNLRECTSLKSLPEETKS-QSLQTLILSGCSS 715

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
            LKKFP I  S++    L LDGT+IK +P SIE  +KL  LNL +CK L  L S++  LK 
Sbjct: 716  LKKFPLISESIE---VLLLDGTAIKSLPDSIETSSKLASLNLKNCKRLKHLSSNLYKLKC 772

Query: 664  LKTLNLSGCFKLENVPETLGQIESLEEL---DISGTAVPH-----STSWYSYIPINLMRK 715
            L+ L LSGC +LE  PE    +ESLE L   D S T +P+     +   +S    N    
Sbjct: 773  LQELILSGCSQLEVFPEIKEDMESLEILLLDDTSITEMPNMKHLSNIKTFSLCGTNCEVS 832

Query: 716  SVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGN-LCSLKELYLSKNSFVSLPTSITH 774
               L L    G   L  L L+ C+L    +P+  GN L SL+ L LS NS  +LP S   
Sbjct: 833  VRVLFLSPPLGCSRLTDLYLSRCSLYR--IPNISGNGLSSLQSLCLSGNSIENLPESFNQ 890

Query: 775  LSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL---LDALKLCKSDSTMIACLD 831
            L  L   +L+ CK L+SLP LP N++ +  + C SL TL   L  L + +   +M    +
Sbjct: 891  LHNLKWFDLKYCKNLKSLPVLPQNLQYLDAHECESLETLANPLTPLTVRERIHSMFMFSN 950

Query: 832  SLKLLGNKS---LAFSMLREYLEAVSNTRQH---------LSVVVPGSEIPEWFMYQNEG 879
              KL  +     +  + ++  L A ++ +++         + V  P +EIP WF YQ  G
Sbjct: 951  CYKLNQDAQESLVGHARIKSQLMANASVKRYYRGFIPEPLVGVCFPATEIPSWFFYQRLG 1010

Query: 880  SSITVTRPSNLYNKKKLVGYAICCV------------FHVLKNSRGNNCFGSYPTHQLNC 927
             S+ ++ P + +     VG A   V            F V  + +  +  GS+       
Sbjct: 1011 RSLDISLPPH-WCDTNFVGLAFSVVVSFKEYEDCAKRFSVKFSGKFEDQDGSFTRFNFTL 1069

Query: 928  HIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDI-RLPLESNLEPFESNHVNVSFEPW 986
               +   G   R +  +  SDH+++ Y    +C+ + +L  ESN       +   SF+ +
Sbjct: 1070 AGWNEPCGT-LRHEPRKLTSDHVFMGY---NSCFQVKKLHGESN----SCCYTKASFKFY 1121

Query: 987  LGQG--------LEVKMCGLHPVYMDEVEE 1008
                         EV  CG+  VY+ E +E
Sbjct: 1122 ATDDEKKKKLEMCEVIKCGMSLVYVPEDDE 1151


>gi|444438415|gb|AGE10387.1| resistance to ralstonia solanacearum 1, partial [Arabidopsis
           thaliana]
          Length = 1373

 Score =  358 bits (918), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 261/711 (36%), Positives = 391/711 (54%), Gaps = 69/711 (9%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
           +R +GI GM G+GKTT+A+ V+D +S  F+AS F+++  +   + GL  L   L  QLL 
Sbjct: 172 IRCVGIWGMPGVGKTTLAKAVFDQMSSAFDASCFIEDYDKSIHEKGLYCL---LEEQLLP 228

Query: 79  LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
             D +I      ++ L  RL  K+VL+V+DDV +    +S     +W G GS IIITSRD
Sbjct: 229 GNDATIMK----LNSLRDRLNSKRVLVVLDDVCNALVAESFLEGFDWLGPGSLIIITSRD 284

Query: 139 EHLLKTHGVDEVYKPHGLNYDEALQLFNMKA-FKTYQPLQECVQLSARIIRYAGGLPLAL 197
           + + +  G++++Y+  GLN  EA QLF + A  K     Q   +LS R+I YA G PLA+
Sbjct: 285 KQVFRLCGINQIYEVQGLNEKEARQLFLLSASIKEDMGEQNLHELSVRVISYANGNPLAI 344

Query: 198 EVLGSFLSGRS-VDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGN 256
            V G  L G+  + E  +   +L+  PP +I+D  + S+D L + EK IFLDIACFF+G 
Sbjct: 345 SVYGRELKGKKKLSEMETAFLKLKRRPPFKIVDAFKSSYDTLSDNEKNIFLDIACFFQGE 404

Query: 257 DRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGK 316
           + +YV   LEGCGF P + I VL++KCL+T+  N +W+H L Q++G++I+  ++  ++ +
Sbjct: 405 NVNYVIQLLEGCGFFPHVEIDVLVDKCLVTISENRVWLHKLTQDIGREIINGETV-QIER 463

Query: 317 RSRLWKEEEVCHVL---------------TESTGTELVEGIVLDNYHHENEVYLCASAKA 361
           R RLW+   + ++L                 + G+E +EG+ LD     + +       A
Sbjct: 464 RRRLWEPWSIKYLLEYNEHKANGEPKTTFKRAQGSEEIEGLFLDT----SNLRFDLQPSA 519

Query: 362 FSKMTNLRLLKI-CN-------LQLPNG-LEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
           F  M NLRLLKI C+       +  P G L  L N LRLL W  YPLK LP N      +
Sbjct: 520 FKNMLNLRLLKIYCSNPEVHPVINFPTGSLHSLPNELRLLHWENYPLKSLPQNFDPRHLV 579

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
           EI M YS++ +LW G K+L+ L+ + L HS +L+ + D   A NLE + L+GCTRL    
Sbjct: 580 EINMPYSQLQKLWGGTKNLEMLRTIRLCHSHHLVDIDDLLKAENLEVIDLQGCTRLQNF- 638

Query: 473 PSLLLHNKLIILNMKDC---TSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG 529
           P+     +L ++N+  C    S++ +P  I     EKL+L+      +G+  L    V  
Sbjct: 639 PAAGRLLRLRVVNLSGCIKIKSVLEIPPNI-----EKLHLQG-----TGILALPVSTVKP 688

Query: 530 DLKFREFPEIVEHMEHLSEL-HLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
           +   RE    +  +  LSE   LE  T++     S + L  L+ L LK+C  L+ LP  +
Sbjct: 689 N--HRELVNFLTEIPGLSEASKLERLTSLLESNSSCQDLGKLICLELKDCSCLQSLP-NM 745

Query: 588 SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
           +NL  L  L LSGCS L       R +K   +L+L GT+I+EVP   +L   LE+LN + 
Sbjct: 746 ANLD-LNVLDLSGCSSLNSIQGFPRFLK---QLYLGGTAIREVP---QLPQSLEILN-AH 797

Query: 648 CKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
              L  LP ++  L+ LK L+LSGC +LE +    G   +L+EL  +GT +
Sbjct: 798 GSCLRSLP-NMANLEFLKVLDLSGCSELETIQ---GFPRNLKELYFAGTTL 844



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 52/83 (62%), Gaps = 1/83 (1%)

Query: 229  DILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH 288
            ++L++S+D LQE++K +FL IA  F   D D+V   + G       G++VL +  LI+V 
Sbjct: 1087 EVLRVSYDDLQEMDKVLFLYIASLFNDEDVDFVAPLIAGIDLDVSSGLKVLADVSLISVS 1146

Query: 289  NN-TLWMHDLLQELGQQIVQRQS 310
            +N  + MH L +++G++I+  QS
Sbjct: 1147 SNGEIVMHSLQRQMGKEILHGQS 1169



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 111/266 (41%), Gaps = 61/266 (22%)

Query: 549 LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
           LH E   ++ LP + +    LV +N+   + L+ L     NL+ LR+++L     L    
Sbjct: 559 LHWENYPLKSLPQNFDP-RHLVEINMPYSQ-LQKLWGGTKNLEMLRTIRLCHSHHLVDID 616

Query: 609 EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
           +++++                          LE+++L  C  L   P++   L+ L+ +N
Sbjct: 617 DLLKA------------------------ENLEVIDLQGCTRLQNFPAAGRLLR-LRVVN 651

Query: 669 LSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLC 728
           LSGC K+++V E    IE L        A+P ST      P +    +   ++P LS   
Sbjct: 652 LSGCIKIKSVLEIPPNIEKLHLQGTGILALPVST----VKPNHRELVNFLTEIPGLSEAS 707

Query: 729 SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKR 788
            L +L                              S +   +S   L KL+ +EL+DC  
Sbjct: 708 KLERL-----------------------------TSLLESNSSCQDLGKLICLELKDCSC 738

Query: 789 LQSLPQLPP-NIRQVRVNGCASLVTL 813
           LQSLP +   ++  + ++GC+SL ++
Sbjct: 739 LQSLPNMANLDLNVLDLSGCSSLNSI 764


>gi|358345567|ref|XP_003636848.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355502783|gb|AES83986.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1237

 Score =  358 bits (918), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 246/678 (36%), Positives = 372/678 (54%), Gaps = 35/678 (5%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D     ++ L+   SS+V++IG+ GMGG GKTT+A  ++  +S  +E   FL+NV E S
Sbjct: 195 LDENYWSIKSLIKIDSSEVQIIGVWGMGGTGKTTLAAAMFQRVSSHYEGHCFLENVTEQS 254

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            K G+     +LLS+LL   D  I  +     M+  RL+R K  +V+DDV   + LQ+L 
Sbjct: 255 EKHGINDTCNKLLSKLLG-EDLDITTLKVIPSMIRRRLKRMKSFIVLDDVHTSELLQNLI 313

Query: 121 G-NREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           G    W G+GS +I+T+RD+H+L + G++E+Y+   +N   +LQLF + AF T  P +  
Sbjct: 314 GVGHGWLGAGSTVIVTTRDKHVLISGGIEEIYEVKKMNSQNSLQLFCLNAFDTVFPKEGF 373

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V+LS R I YA G+PLAL+VLGS L  +S  EW   L +LE    +EI  IL+ S++ L 
Sbjct: 374 VELSKRAIDYAKGIPLALKVLGSSLRCKSEIEWNCALSKLEKISNAEIDRILRWSYNELD 433

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLL 298
           + EK IFLDIACFFKG +R+ VT  L  CGF   IGI  L++K LI V + N + MHDL+
Sbjct: 434 DKEKNIFLDIACFFKGRERNSVTKILNDCGFFADIGISHLLDKALIRVDYKNFIQMHDLI 493

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD--NYHHENEVYLC 356
           QE+G+QIV+ +S +  G+RSRL   +EV  VL  + G+E++E I LD   Y H N     
Sbjct: 494 QEMGRQIVREESLKNPGQRSRLCDPKEVFDVLKNNRGSEIIEAIFLDATEYTHIN----- 548

Query: 357 ASAKAFSKMTNLRLLK------ICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK 410
            + KAF KM NLRLL       + ++ LP+GL+ L   LR   W GYP K LP     + 
Sbjct: 549 LNPKAFEKMVNLRLLAFRDHKGVKSVSLPHGLDSLPETLRYFLWDGYPWKSLPPTFCAEM 608

Query: 411 TIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYE 470
            +E+ M  S + +LW G+  +  L+V+ L  S  LI  P+ +G+PNL+ + LE C  + E
Sbjct: 609 LVELSMQESHVEKLWNGVLDMPNLEVLDLGRSRKLIECPNVSGSPNLKYVTLEDCESMPE 668

Query: 471 IHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLPTTISGLKCLST 524
           +  S+ L  KL  L++  CTSL +L       +  +L      NLK +  T + +  L  
Sbjct: 669 VDSSIFLLQKLERLSVLGCTSLKSLSSNTCSPAFRELNAMFCDNLKDISVTFASVDGLVL 728

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHLE-GTAIRGLPLSIELLSGLVLLNLKNCRS---- 579
                D    E P  + H ++L+ L       +  LP +      + L++ ++C      
Sbjct: 729 FLTEWD--GNELPSSILHKKNLTRLVFPISDCLVDLPENFS--DEIWLMSQRSCEHDPFI 784

Query: 580 --LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELL 637
              ++LP      + ++ L  S    L + P  +  +  L  L L G  I+ +P +I  L
Sbjct: 785 TLHKVLPSPA--FQSVKRLIFSHAPLLSEIPSNISLLSSLDSLTLSGLIIRSLPETIRYL 842

Query: 638 TKLELLNLSDCKNLVRLP 655
            +L+ L++ +CK L  +P
Sbjct: 843 PQLKRLDVLNCKMLQSIP 860



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 120/493 (24%), Positives = 182/493 (36%), Gaps = 100/493 (20%)

Query: 587  VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLS 646
            V ++  L  L L    KL + P +  S         D  S+ EV SSI LL KLE L++ 
Sbjct: 626  VLDMPNLEVLDLGRSRKLIECPNVSGSPNLKYVTLEDCESMPEVDSSIFLLQKLERLSVL 685

Query: 647  DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL----EELDISGTAVPHST 702
             C +L  L S+  +  + + LN   C  L+++  T   ++ L     E D  G  +P S 
Sbjct: 686  GCTSLKSLSSNTCS-PAFRELNAMFCDNLKDISVTFASVDGLVLFLTEWD--GNELPSSI 742

Query: 703  SWYS-----YIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKE 757
                       PI+     +         L S R         +   LPS      S+K 
Sbjct: 743  LHKKNLTRLVFPISDCLVDLPENFSDEIWLMSQRSCEHDPFITLHKVLPSPA--FQSVKR 800

Query: 758  LYLSKNSFVS------------------------LPTSITHLSKLLNIELEDCKRLQSLP 793
            L  S    +S                        LP +I +L +L  +++ +CK LQS+P
Sbjct: 801  LIFSHAPLLSEIPSNISLLSSLDSLTLSGLIIRSLPETIRYLPQLKRLDVLNCKMLQSIP 860

Query: 794  QLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKS---LAFSMLREYL 850
             L  ++    +  C SL  +L   +  +        L+ +KL  +     L  +M R  L
Sbjct: 861  PLSKHVCFFMLWNCESLEKVLSLSEPAEKPRCGFLLLNCIKLDPHSYQTVLNDAMERIEL 920

Query: 851  EA--------VSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
             A        V ++  H    +PG E   WF Y +   S+T+  PSN      L G+A  
Sbjct: 921  VAKVVSENAFVCDSAWHFLPAMPGME--NWFHYSSTQVSVTLELPSN------LSGFA-- 970

Query: 903  CVFHVLKNSR-------GNNCFGSYPTHQLNCHIGHGIYGIGFR-----------DKFGQ 944
              + VL   R       G  CF       L+ + G  +Y   F            D    
Sbjct: 971  -YYLVLSQGRMGYGVDFGCECF-------LDNNSGEKVYITSFTKTSFIGLLRRFDPLIH 1022

Query: 945  AGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHV-NVSFEPWLG----------QGLEV 993
              SDHL + +    +C  I   +E+  E    N V N S+ P L             + +
Sbjct: 1023 MMSDHL-VFWYDGGSCKQI---MEAFEEIKADNDVNNTSYNPKLTFRFFIHENIYDEVVI 1078

Query: 994  KMCGLHPVYMDEV 1006
            K CG H +Y +E 
Sbjct: 1079 KECGFHWMYKEET 1091


>gi|357437847|ref|XP_003589199.1| Disease resistance protein [Medicago truncatula]
 gi|355478247|gb|AES59450.1| Disease resistance protein [Medicago truncatula]
          Length = 1613

 Score =  358 bits (918), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 298/855 (34%), Positives = 458/855 (53%), Gaps = 104/855 (12%)

Query: 11  LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQR 70
           L++ G  D   +   G+ G+GKTT+A  VY+LI H+FE+S FL+N++E S K GL+ LQ+
Sbjct: 196 LLNVGCDD--RVAKVGIHGIGKTTLALEVYNLIVHQFESSCFLENIQENSEKHGLIYLQK 253

Query: 71  QLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGS 130
            +L +++   +  + +V  GI ++  RL++KKVLL++DDV + KQL ++AG  +W+G GS
Sbjct: 254 IILLEIIGEKEIELTSVKQGISVIQQRLRKKKVLLLLDDVDEQKQLDAIAGGNDWYGLGS 313

Query: 131 RIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYA 190
           R+IIT+RD+ LL +HGV+  Y+ H LN  +A +L   KAFKT +       +  R + +A
Sbjct: 314 RVIITTRDKGLLLSHGVESTYEVHELNKKDAFELLRQKAFKTNKVCPNYADVLNRALTHA 373

Query: 191 GGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIA 250
            GLPLALEV+GS L  ++V++ +STL+R E  P  ++  +L++SFD L+E EK +FLDIA
Sbjct: 374 SGLPLALEVIGSHLFHKTVEQCKSTLDRYERIPDKKMQTLLKVSFDALEEEEKSVFLDIA 433

Query: 251 CFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELGQQIVQR 308
           C FKG D   V   L    G +    ++VL+EK LI +  + ++ +HD+++++G++IV++
Sbjct: 434 CCFKGYDLTIVNKMLHAHHGDNMEDHMQVLVEKSLIKITESRSVTLHDVIEDMGKEIVRQ 493

Query: 309 QSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNL 368
           +SP+E GKRSRLW  E++  VL E+TGT  +E I LD     + + +    +AF KM NL
Sbjct: 494 ESPKEPGKRSRLWCPEDIVQVLEENTGTSKIEIIYLD-----SSIEVKWDEEAFKKMENL 548

Query: 369 RLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGI 428
           R L I +       +YL N LR+L WR YP   +PS+    K     + +     +W   
Sbjct: 549 RTLIIRHGAFSESPKYLPNSLRILEWRKYPSGGVPSDFYPKKLAICKIAFDFTSFVWGDF 608

Query: 429 --KHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNM 486
             K    +KV+ + +   L RMPD +G  NLE+L  + C  L  +  S+ L  KL IL +
Sbjct: 609 LKKKFQNMKVLNIDNCGFLARMPDISGLLNLEELSFQYCENLITMDDSVGLLAKLKILRV 668

Query: 487 KDCTSLITLPGKILMKSLEKLN------LKSLPTTISG-LKCLSTLDVSGDLKFREFPEI 539
             C  L +LP   L+ SLE+L+      L+S P  + G L  L TL V      R  P  
Sbjct: 669 GSCKKLKSLPPLKLV-SLEELDLSYIDSLESFPHVVDGFLNKLQTLSVKNCNTIRSIP-- 725

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSN-LKCLRSLKL 598
                               PL    ++ L  LNL  C SLE  P+ V   L+ L+ L++
Sbjct: 726 --------------------PLK---MASLEELNLLYCDSLECFPLVVDGLLEKLKILRV 762

Query: 599 SGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSI 658
            GCS +K  P                            LT LE L+LS C +L   P  +
Sbjct: 763 IGCSNIKSIPPFK-------------------------LTSLEELDLSYCNSLTSFPVIV 797

Query: 659 IA-LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPI--NLMRK 715
              L  LK L++  C KL+N+P    ++ +LE+LD+S     +  S  S+ P+   L+ K
Sbjct: 798 DGFLDKLKLLSVRYCCKLKNIPPL--KLGALEQLDLS-----YCNSLESFPPVVDGLLGK 850

Query: 716 SVALK---------LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFV 766
              LK         +P L  L SL++L+L+ C+ +E   P   G L  L+  +LS  S +
Sbjct: 851 LKILKVFCCNSIISIPPLK-LDSLKELHLSYCDSLENFQPVMNGLLKKLQ--FLSIKSCI 907

Query: 767 SL----PTSITHLSKLLNIELEDCKRLQSLP----QLPPNIRQVRVNGCASLVTLLDALK 818
           ++    P  +T L +L   +L +C+ L+S P    QL  N++ + +  C  L  ++  LK
Sbjct: 908 NIKSIPPLQLTSLEEL---DLSNCQSLESFPPVVDQLLENLKFLSIRYCHKL-RIIPPLK 963

Query: 819 LCKSDSTMIACLDSL 833
           L   +   I+  DSL
Sbjct: 964 LDSLELLDISYCDSL 978



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 185/761 (24%), Positives = 293/761 (38%), Gaps = 214/761 (28%)

Query: 364  KMTNLRLLKICNLQ----LPNGLEYLSNRLRLLGWR-GYPLKFLPSNLQMD--KTIEIYM 416
            ++T+L  L + N Q     P  ++ L   L+ L  R  + L+ +P  L++D  + ++I  
Sbjct: 916  QLTSLEELDLSNCQSLESFPPVVDQLLENLKFLSIRYCHKLRIIPP-LKLDSLELLDISY 974

Query: 417  CYS--RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
            C S      +  G+  L+KLK+M +    NL  +P    A +LE+L L  C  L E  P+
Sbjct: 975  CDSLDSFPHVVDGM--LEKLKIMRVKSCSNLKSIPPLKLA-SLEELDLSYCDSL-ESFPT 1030

Query: 475  LL--LHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLPTTISG-------- 518
            ++     KL +L++K C  L + P  + + SLE L      NL+S P  + G        
Sbjct: 1031 VVDGFLGKLRVLSVKGCNKLKSFP-PLKLASLEVLDLSYCDNLESFPLLVDGFMDKLQFL 1089

Query: 519  ---------------LKCLSTLDVSGDLKFREFPEIVEHM-------------------- 543
                           L  L   D+S       FP +V+ M                    
Sbjct: 1090 SIIYCSKLRSIPPLKLALLEHFDLSYCDSLVSFPPVVDGMLEKLRIFRVISCNRIQSIPP 1149

Query: 544  ---EHLSELHLE-GTAIRGLPLSIE-LLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKL 598
                 L EL+L     +   P  ++ LL  L +LN++ C  L+ +P     L  L  L L
Sbjct: 1150 LKLTSLEELNLTYCDGLESFPHVVDGLLGKLKVLNVRYCHKLKSIPPL--KLDSLEQLDL 1207

Query: 599  SGCSKLKKFPEIVR-SMKDLSELFLDGTS-IKEVPSSIELLTKLELLNLSDCKNLVRLP- 655
            S C  LK FP IV   +K L  L +   S I+ +P     L  LE LNLS C NL   P 
Sbjct: 1208 SYCDSLKSFPPIVDGQLKKLKILRVTNCSNIRSIPPLN--LASLEELNLSYCHNLECFPL 1265

Query: 656  --------------------SSIIALK--SLKTLNLSGCFKLENVPETLGQIESLEELDI 693
                                 SI  LK  SL+ L+LS C  LE+ P+ LG++E++ ++ +
Sbjct: 1266 VVDRFPNNLKVLSVRYCRKLKSIPPLKFASLEVLDLSYCDNLESFPKILGEMENIRQVHL 1325

Query: 694  SGTAVPHSTSWYSYIPINLMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNL 752
              T +                     +LP S   L  LR L L +C +++  LPS I  +
Sbjct: 1326 YTTPIK--------------------ELPFSFQNLTRLRTLYLCNCGIVQ--LPSSIVMM 1363

Query: 753  CSLKELYLSKNSF------------VSLPTSITHLSKLLNIELED--------------- 785
              L EL +    +            +S+ +S     ++ N  L D               
Sbjct: 1364 QELDELIIEDGGWLFQKEDQGDKEVISMQSSQVEFLRVWNCNLSDESLAIGLMWFANKLF 1423

Query: 786  ---CKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLA 842
               C+ LQ +  +PPN++      C SL                ++C             
Sbjct: 1424 LDNCENLQEIKGIPPNLKTFSAINCISLT---------------LSCTSKF--------- 1459

Query: 843  FSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQ-NEGSSITVTRPSNLYNKKKLVGYAI 901
               + + L    NT    S V P +EIP+W  +Q  +G SI+       + + K     +
Sbjct: 1460 ---MNQELHESGNT----SFVFPQAEIPKWIDHQCMQGLSIS------FWFRNKFPAIVL 1506

Query: 902  CCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRD---KFGQAGSDHLWLLYLSRQ 958
            C V  + +++           +Q N  +        +RD    +    S HL + ++  +
Sbjct: 1507 CVVSPLTRDN-----------YQPNVKVFINGKTFFYRDVEADYEWPISFHLHIFHMQIE 1555

Query: 959  TCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLH 999
               D    +++ L   E NHV V F      G E    G+H
Sbjct: 1556 KFND---DVDAALLENEWNHVVVDF------GFEFHKSGIH 1587


>gi|358344433|ref|XP_003636294.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355502229|gb|AES83432.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1198

 Score =  358 bits (918), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 246/678 (36%), Positives = 372/678 (54%), Gaps = 35/678 (5%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D     ++ L+   SS+V++IG+ GMGG GKTT+A  ++  +S  +E   FL+NV E S
Sbjct: 195 LDENYWSIKSLIKIDSSEVQIIGVWGMGGTGKTTLAAAMFQRVSSHYEGHCFLENVTEQS 254

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            K G+     +LLS+LL   D  I  +     M+  RL+R K  +V+DDV   + LQ+L 
Sbjct: 255 EKHGINDTCNKLLSKLLG-EDLDITTLKVIPSMIRRRLKRMKSFIVLDDVHTSELLQNLI 313

Query: 121 G-NREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           G    W G+GS +I+T+RD+H+L + G++E+Y+   +N   +LQLF + AF T  P +  
Sbjct: 314 GVGHGWLGAGSTVIVTTRDKHVLISGGIEEIYEVKKMNSQNSLQLFCLNAFDTVFPKEGF 373

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V+LS R I YA G+PLAL+VLGS L  +S  EW   L +LE    +EI  IL+ S++ L 
Sbjct: 374 VELSKRAIDYAKGIPLALKVLGSSLRCKSEIEWNCALSKLEKISNAEIDRILRWSYNELD 433

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLL 298
           + EK IFLDIACFFKG +R+ VT  L  CGF   IGI  L++K LI V + N + MHDL+
Sbjct: 434 DKEKNIFLDIACFFKGRERNSVTKILNDCGFFADIGISHLLDKALIRVDYKNFIQMHDLI 493

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD--NYHHENEVYLC 356
           QE+G+QIV+ +S +  G+RSRL   +EV  VL  + G+E++E I LD   Y H N     
Sbjct: 494 QEMGRQIVREESLKNPGQRSRLCDPKEVFDVLKNNRGSEIIEAIFLDATEYTHIN----- 548

Query: 357 ASAKAFSKMTNLRLLK------ICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK 410
            + KAF KM NLRLL       + ++ LP+GL+ L   LR   W GYP K LP     + 
Sbjct: 549 LNPKAFEKMVNLRLLAFRDHKGVKSVSLPHGLDSLPETLRYFLWDGYPWKSLPPTFCAEM 608

Query: 411 TIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYE 470
            +E+ M  S + +LW G+  +  L+V+ L  S  LI  P+ +G+PNL+ + LE C  + E
Sbjct: 609 LVELSMQESHVEKLWNGVLDMPNLEVLDLGRSRKLIECPNVSGSPNLKYVTLEDCESMPE 668

Query: 471 IHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLPTTISGLKCLST 524
           +  S+ L  KL  L++  CTSL +L       +  +L      NLK +  T + +  L  
Sbjct: 669 VDSSIFLLQKLERLSVLGCTSLKSLSSNTCSPAFRELNAMFCDNLKDISVTFASVDGLVL 728

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHLE-GTAIRGLPLSIELLSGLVLLNLKNCRS---- 579
                D    E P  + H ++L+ L       +  LP +      + L++ ++C      
Sbjct: 729 FLTEWD--GNELPSSILHKKNLTRLVFPISDCLVDLPENFS--DEIWLMSQRSCEHDPFI 784

Query: 580 --LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELL 637
              ++LP      + ++ L  S    L + P  +  +  L  L L G  I+ +P +I  L
Sbjct: 785 TLHKVLPSPA--FQSVKRLIFSHAPLLSEIPSNISLLSSLDSLTLSGLIIRSLPETIRYL 842

Query: 638 TKLELLNLSDCKNLVRLP 655
            +L+ L++ +CK L  +P
Sbjct: 843 PQLKRLDVLNCKMLQSIP 860



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 120/493 (24%), Positives = 182/493 (36%), Gaps = 100/493 (20%)

Query: 587  VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLS 646
            V ++  L  L L    KL + P +  S         D  S+ EV SSI LL KLE L++ 
Sbjct: 626  VLDMPNLEVLDLGRSRKLIECPNVSGSPNLKYVTLEDCESMPEVDSSIFLLQKLERLSVL 685

Query: 647  DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL----EELDISGTAVPHST 702
             C +L  L S+  +  + + LN   C  L+++  T   ++ L     E D  G  +P S 
Sbjct: 686  GCTSLKSLSSNTCS-PAFRELNAMFCDNLKDISVTFASVDGLVLFLTEWD--GNELPSSI 742

Query: 703  SWYS-----YIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKE 757
                       PI+     +         L S R         +   LPS      S+K 
Sbjct: 743  LHKKNLTRLVFPISDCLVDLPENFSDEIWLMSQRSCEHDPFITLHKVLPSPA--FQSVKR 800

Query: 758  LYLSKNSFVS------------------------LPTSITHLSKLLNIELEDCKRLQSLP 793
            L  S    +S                        LP +I +L +L  +++ +CK LQS+P
Sbjct: 801  LIFSHAPLLSEIPSNISLLSSLDSLTLSGLIIRSLPETIRYLPQLKRLDVLNCKMLQSIP 860

Query: 794  QLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKS---LAFSMLREYL 850
             L  ++    +  C SL  +L   +  +        L+ +KL  +     L  +M R  L
Sbjct: 861  PLSKHVCFFMLWNCESLEKVLSLSEPAEKPRCGFLLLNCIKLDPHSYQTVLNDAMERIEL 920

Query: 851  EA--------VSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
             A        V ++  H    +PG E   WF Y +   S+T+  PSN      L G+A  
Sbjct: 921  VAKVVSENAFVCDSAWHFLPAMPGME--NWFHYSSTQVSVTLELPSN------LSGFA-- 970

Query: 903  CVFHVLKNSR-------GNNCFGSYPTHQLNCHIGHGIYGIGFR-----------DKFGQ 944
              + VL   R       G  CF       L+ + G  +Y   F            D    
Sbjct: 971  -YYLVLSQGRMGYGVDFGCECF-------LDNNSGEKVYITSFTKTSFIGLLRRFDPLIH 1022

Query: 945  AGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHV-NVSFEPWLG----------QGLEV 993
              SDHL + +    +C  I   +E+  E    N V N S+ P L             + +
Sbjct: 1023 MMSDHL-VFWYDGGSCKQI---MEAFEEIKADNDVNNTSYNPKLTFRFFIHENIYDEVVI 1078

Query: 994  KMCGLHPVYMDEV 1006
            K CG H +Y +E 
Sbjct: 1079 KECGFHWMYKEET 1091


>gi|10177708|dbj|BAB11082.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1145

 Score =  358 bits (918), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 259/722 (35%), Positives = 377/722 (52%), Gaps = 86/722 (11%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV-----REISSKGG------ 64
           + +VRM+GI G  G+GKTTIAR +++ +S  F  S F+D       REI S+        
Sbjct: 200 AEEVRMVGIWGSSGIGKTTIARALFNQLSRHFPVSKFIDRAFVYKSREIFSRANPDDHNM 259

Query: 65  LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNRE 124
            + LQ +LLS++L++ D  I    D + +LG RLQ +KVL+++DD+ D   L SL G  +
Sbjct: 260 KLHLQEKLLSEILRMPDIKI----DHLGVLGERLQHQKVLIIVDDLDDQVILDSLVGQTQ 315

Query: 125 WFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSA 184
           WFGSGSRII  + ++H L+ H +D +Y+        AL +    AF+   P +    L  
Sbjct: 316 WFGSGSRIIAVTNNKHFLRAHEIDHIYEVSLPTQQHALAMLCQSAFRKKSPPEGFEMLVV 375

Query: 185 RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL-QELEK 243
           ++ R+   LPL L VLGS+L GR  + W   L RLE     +I  IL+IS+DGL  E +K
Sbjct: 376 QVARHVDSLPLGLNVLGSYLRGRDKEYWMEMLPRLENGLHDKIEKILRISYDGLGSEEDK 435

Query: 244 KIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQ 303
            IF  IAC F   +   +T+ L   G +  IG++ L++K +I V    + MH +LQE+G+
Sbjct: 436 AIFRHIACLFNHMEVTTITSLLTDLGIN--IGLKNLVDKSIIHVRRGCVEMHRMLQEMGR 493

Query: 304 QIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFS 363
           +IV+ QS ++ GKR  L    ++  VL+E  GT+ V GI L N    +E+Y+  S  AF 
Sbjct: 494 KIVRTQSIDKPGKREFLVDPNDISDVLSEGIGTQKVLGISL-NTGEIDELYVHES--AFK 550

Query: 364 KMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
            M+NLR L+I +        L LP  L+YL  RL+LL W  +P++ +PSN + +  + + 
Sbjct: 551 GMSNLRFLEIDSKNFGKAGRLYLPESLDYLPPRLKLLCWPNFPMRCMPSNFRPENLVTLK 610

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           M  S++ +LW+G+  L  LK M +  S NL  +PD +   NLE L L  C  L E+  S+
Sbjct: 611 MPNSKLHKLWEGVASLTCLKEMDMVGSSNLKEIPDLSMPTNLEILKLGFCKSLVELPSSI 670

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLP---TTISGLKCLSTLD 526
              NKL+ L+M+ C SL  LP    +KSL+ LN      L++ P   T IS L    T  
Sbjct: 671 RNLNKLLKLDMEFCHSLEILPTGFNLKSLDHLNFRYCSELRTFPEFSTNISVLMLFGT-- 728

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTAIRG---------------------------- 558
                   EFP    ++E+L EL L      G                            
Sbjct: 729 -----NIEEFP----NLENLVELSLSKEESDGKQWDGVKPLTPFLEMLSPTLKSLKLENI 779

Query: 559 -----LPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRS 613
                LP S + L+ L  L++  CR+LE LP  + NLK L  L   GCS+L+ FPEI   
Sbjct: 780 PSLVELPSSFQNLNQLKELSITYCRNLETLPTGI-NLKSLNYLCFKGCSQLRSFPEI--- 835

Query: 614 MKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCF 673
             ++S L L+ T I+EVP  IE    L  L +  C  L  L  +I  +K+L  ++ S C 
Sbjct: 836 STNISVLNLEETGIEEVPWQIENFFNLTKLTMRSCSKLKCLSLNIPKMKTLWDVDFSDCA 895

Query: 674 KL 675
            L
Sbjct: 896 AL 897



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 196/468 (41%), Gaps = 103/468 (22%)

Query: 496  PGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-- 553
            P  ++   +    L  L   ++ L CL  +D+ G    +E P++   M    E+   G  
Sbjct: 603  PENLVTLKMPNSKLHKLWEGVASLTCLKEMDMVGSSNLKEIPDL--SMPTNLEILKLGFC 660

Query: 554  TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRS 613
             ++  LP SI  L+ L+ L+++ C SLEILP T  NLK L  L    CS+L+ FPE    
Sbjct: 661  KSLVELPSSIRNLNKLLKLDMEFCHSLEILP-TGFNLKSLDHLNFRYCSELRTFPEFS-- 717

Query: 614  MKDLSELFLDGTSIKEVPSSIELLTKLEL-----------------------------LN 644
              ++S L L GT+I+E P+ +E L +L L                             L 
Sbjct: 718  -TNISVLMLFGTNIEEFPN-LENLVELSLSKEESDGKQWDGVKPLTPFLEMLSPTLKSLK 775

Query: 645  LSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSW 704
            L +  +LV LPSS   L  LK L+++ C  LE +P  +  ++SL  L   G +   S   
Sbjct: 776  LENIPSLVELPSSFQNLNQLKELSITYCRNLETLPTGIN-LKSLNYLCFKGCSQLRS--- 831

Query: 705  YSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL-SKN 763
                             P +S   S+  LNL +  + E  +P  I N  +L +L + S +
Sbjct: 832  ----------------FPEISTNISV--LNLEETGIEE--VPWQIENFFNLTKLTMRSCS 871

Query: 764  SFVSLPTSITHLSKLLNIELEDCKRLQ--SLPQLPPNIRQVRVNGCASLVTLLDALKLCK 821
                L  +I  +  L +++  DC  L   +L   P +      +   SL   LD  + C 
Sbjct: 872  KLKCLSLNIPKMKTLWDVDFSDCAALTVVNLSGYPSDTLSEEEDD--SLDPFLD-FRGCF 928

Query: 822  SDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSS 881
            S       LD   +L  +S+ F+                S+  PG ++P +F Y+  G+S
Sbjct: 929  S-------LDPETVLHQESVIFN----------------SMAFPGEQVPSYFTYRTTGTS 965

Query: 882  ITVTR----PSNLYNKKKLVGYAICCV---FHVLK---NSRGNNCFGS 919
              +      P+ L   +    + +C V   F+++    NSR    FG+
Sbjct: 966  TILPNIPLLPTQL--SQPFFRFRVCAVATAFNIVSIQVNSRFTGRFGN 1011


>gi|297811235|ref|XP_002873501.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319338|gb|EFH49760.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 989

 Score =  358 bits (918), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 269/739 (36%), Positives = 389/739 (52%), Gaps = 100/739 (13%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVR--- 57
           M +  EK+  L+   S +VRMIGI G  G+GKTTIARVVY+  S+ F+   FLDN++   
Sbjct: 157 MRAHLEKMEPLLCLESDEVRMIGIWGPPGIGKTTIARVVYNQFSNSFQLGVFLDNIKANY 216

Query: 58  ------EISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVV 111
                 + SSK   + LQ+  +SQ++   D  I+++    D    RL+ KKVL+V+D V 
Sbjct: 217 TRPCSDDYSSK---LQLQKHFMSQIINHKDMEIFHLGVAQD----RLKDKKVLVVLDGVN 269

Query: 112 DVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFK 171
              QL ++     WFG GSRIIIT++D  L + HG++ +Y+      DEALQ+F M AF 
Sbjct: 270 QSVQLDAMVKETWWFGPGSRIIITTQDHRLFRAHGINHIYQVDFPPADEALQIFCMYAFG 329

Query: 172 TYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDIL 231
              P     +L+  +  +AG LPL L VLGS   G S  EW  +L RL+    ++I  IL
Sbjct: 330 QKSPKDGFEELAWEVTTFAGKLPLGLRVLGSHFRGMSKQEWIKSLPRLKTSLDTDIQSIL 389

Query: 232 QISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-N 290
           + S+D L + +K +FL IACFF     + V   L          + VL +K LI  +   
Sbjct: 390 KFSYDALDDEDKDLFLHIACFFNYGVIEKVEEHLARKFLEVRQRLNVLSQKSLILFNQCG 449

Query: 291 TLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVL-TESTGTELVEGIVLDNYHH 349
            + MH LL++LG++IV++ S  + G+R  L  E E+C VL +++ G++ + GI L NY  
Sbjct: 450 RIEMHSLLEKLGREIVRKLSIHDPGQRQFLVDEREICEVLISDAAGSKSIIGIDL-NYRG 508

Query: 350 ENEVYLCASAKAFSKMTNLRLLKI---CN-LQLPNGLEYLSNRLRLLGWRGYPLKFLPSN 405
             E  L  S +AF  M NL+ L+I   CN LQL  GL Y S +LR+L W  +P+  LPSN
Sbjct: 509 IGE-ELNISERAFEGMCNLQFLRIDGDCNTLQLSQGLNYFSRKLRILHWSYFPMACLPSN 567

Query: 406 LQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
           + ++  +E+ M  S++ +LW+GIK L  LK M +  S NL  +PDF+ A NL+K      
Sbjct: 568 VNLEFLVELIMDNSKLEKLWEGIKPLRNLKRMDMRDSANLKELPDFSTATNLQK------ 621

Query: 466 TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI-LMKSLEKLNLKSLPTTISGLKCLST 524
                             LN+  C+SLI LP  I    +L+KLNL+         +C + 
Sbjct: 622 ------------------LNLSYCSSLIKLPSSIGNATNLKKLNLR---------RCSNI 654

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHLEGTA-IRGLPLSIELLSGLVLLNLKNCRSLEIL 583
           +         EFP  +E   +L  L L   + +  LPL I+ L  L  L L  C  L++L
Sbjct: 655 M---------EFPSFIEKATNLEILDLSSCSNLVELPLFIKNLQKLQKLRLGGCSKLQVL 705

Query: 584 PVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELL 643
           P  + NL+ L  L L+ CS LK FPEI  +++ L    L  T+I+EVP SI    +L+ L
Sbjct: 706 PTNI-NLESLVELDLTDCSALKLFPEISTNVRVLK---LSETAIEEVPPSIAFWPRLDEL 761

Query: 644 NLSDCKNLVRLPSSIIALKS--------------------LKTLNLSGCFKLEN---VPE 680
           ++S  +NL  LP ++ ++                      L  L L GC KLE+   +PE
Sbjct: 762 HMSYFENLKELPHALCSITDLYLSDTEIQEVPSLVKRISRLDRLVLKGCRKLESLPQIPE 821

Query: 681 TLGQI-----ESLEELDIS 694
           +L  I     ESLE LD S
Sbjct: 822 SLSIIDAEDCESLERLDCS 840



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 179/351 (50%), Gaps = 31/351 (8%)

Query: 542 HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
           ++E L EL ++ + +  L   I+ L  L  +++++  +L+ LP   S    L+ L LS C
Sbjct: 569 NLEFLVELIMDNSKLEKLWEGIKPLRNLKRMDMRDSANLKELP-DFSTATNLQKLNLSYC 627

Query: 602 SKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           S L K P  + +  +L +L L   S I E PS IE  T LE+L+LS C NLV LP  I  
Sbjct: 628 SSLIKLPSSIGNATNLKKLNLRRCSNIMEFPSFIEKATNLEILDLSSCSNLVELPLFIKN 687

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPIN-----LMRK 715
           L+ L+ L L GC KL+ +P  +  +ESL ELD++  +   +   +  I  N     L   
Sbjct: 688 LQKLQKLRLGGCSKLQVLPTNIN-LESLVELDLTDCS---ALKLFPEISTNVRVLKLSET 743

Query: 716 SVALKLPSLSGLCSLRKLNLTDC-NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITH 774
           ++    PS++    L +L+++   NL E  LP     LCS+ +LYLS      +P+ +  
Sbjct: 744 AIEEVPPSIAFWPRLDELHMSYFENLKE--LPH---ALCSITDLYLSDTEIQEVPSLVKR 798

Query: 775 LSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLK 834
           +S+L  + L+ C++L+SLPQ+P ++  +    C SL  L      C   +  I CL   K
Sbjct: 799 ISRLDRLVLKGCRKLESLPQIPESLSIIDAEDCESLERL-----DCSFHNPKI-CLKFAK 852

Query: 835 LLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQN-EGSSITV 884
                   F + +E  + +  T      ++PG E+P +F +++  G S+T+
Sbjct: 853 -------CFKLNQEAKDLIIQTPTSEHAILPGGEVPSYFTHRSTSGGSLTI 896


>gi|9279731|dbj|BAB01321.1| disease resistance protein RPP1-WsB [Arabidopsis thaliana]
          Length = 1285

 Score =  358 bits (918), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 305/966 (31%), Positives = 457/966 (47%), Gaps = 114/966 (11%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M +  E +R L+     DVRMIGI G  G+GKTTIAR +   +S  F+ S  + N++E  
Sbjct: 205  MGAHMENMRALLRLDLDDVRMIGIWGPPGIGKTTIARFLLSQVSKSFQLSTIMVNIKECY 264

Query: 61   SKGGL--VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
                L   S+Q QL +++L    N    +   + +   RL+ KKV LV+DDV  + QL +
Sbjct: 265  PSPCLDEYSVQLQLQNKMLSKMINQKDIMIPHLGVAQERLKDKKVFLVLDDVDQLGQLDA 324

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            LA    WFG GSRIIIT+ +  LL  H ++ +YK    + DEA Q+F M AF    P   
Sbjct: 325  LAKETRWFGPGSRIIITTENLRLLMAHRINHIYKVEFSSTDEAFQIFCMHAFGQKHPYNG 384

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
              +LS  +   AGGLPL L+V+GS L G S  EW+ TL RL      +I  IL  S++ L
Sbjct: 385  FYELSREVTELAGGLPLGLKVMGSSLRGMSKQEWKRTLPRLRTCLDGKIESILMFSYEAL 444

Query: 239  QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
               +K +FL IACFF       V   L         G+ VL EK LI +      MH LL
Sbjct: 445  SHEDKDLFLCIACFFNYQKIKKVEKHLADRFLDVRQGLYVLAEKSLIHIGTGATEMHTLL 504

Query: 299  QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTEST--GTELVEGIVLDNYHHENEVYLC 356
             +LG++I   QS  +  K   L  E E+C  L++ T   +  + G+  D   +  EV   
Sbjct: 505  VQLGREIAHTQSTNDPRKSLFLVDEREICEALSDETMDSSRRIIGMDFDLSKNGEEV-TN 563

Query: 357  ASAKAFSKMTNLRLLKI----CNLQLPN---------------------GLEYLSNRLRL 391
             S K   +M+NL+ ++     C     N                      L Y    +RL
Sbjct: 564  ISEKGLQRMSNLQFIRFDGRSCARHSSNLTVVRSSDNNCAHPDTVNALQDLNYQFQEIRL 623

Query: 392  LGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDF 451
            L W  +    LPS    +  +E+ M  S    LW+G K L  LK M LS+S +L  +PD 
Sbjct: 624  LHWINFRRLCLPSTFNPEFLVELNMPSSTCHTLWEGSKALRNLKWMDLSYSISLKELPDL 683

Query: 452  TGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMK-SLEKLNLK 510
            + A NLE+LIL+ C+                 L++ +C+SL+ LP  I    +L+ L+L 
Sbjct: 684  STATNLEELILKYCS-----------------LDLNECSSLVELPSSIGNAINLQNLDLG 726

Query: 511  -----SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIE 564
                  LP +I     L    ++G     E P  + +  +L  L L   +++  LP SI 
Sbjct: 727  CLRLLKLPLSIVKFTNLKKFILNGCSSLVELP-FMGNATNLQNLDLGNCSSLVELPSSIG 785

Query: 565  LLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG 624
                L  L+L NC SL  LP  + N   L  L L  CS L + P  +  + +L  L L G
Sbjct: 786  NAINLQNLDLSNCSSLVKLPSFIGNATNLEILDLRKCSSLVEIPTSIGHVTNLWRLDLSG 845

Query: 625  -TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLG 683
             +S+ E+PSS+  +++L++LNL +C NLV+LPSS     +L  L+LSGC  L  +P ++G
Sbjct: 846  CSSLVELPSSVGNISELQVLNLHNCSNLVKLPSSFGHATNLWRLDLSGCSSLVELPSSIG 905

Query: 684  QIESLEELDISGTA----VPHST-SWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDC 738
             I +L+EL++   +    +P S  + +    ++L R      LPS   L SL +L+LTDC
Sbjct: 906  NITNLQELNLCNCSNLVKLPSSIGNLHLLFTLSLARCQKLEALPSNINLKSLERLDLTDC 965

Query: 739  N---------------LMEGA----LPSDIGNLCSLKELYLS------------------ 761
            +                ++G     +PS I +   L  L++S                  
Sbjct: 966  SQFKSFPEISTNIECLYLDGTAVEEVPSSIKSWSRLTVLHMSYFEKLKEFSHVLDIITWL 1025

Query: 762  --KNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKL 819
                    +   I  +S+L  + L  C++L SLPQLP ++  +   GC SL TL      
Sbjct: 1026 EFGEDIQEVAPWIKEISRLHGLRLYKCRKLLSLPQLPESLSIINAEGCESLETL-----D 1080

Query: 820  CKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQ-NE 878
            C  +       + L LL N +  F + +E  + +         V+PG+E+P +F ++   
Sbjct: 1081 CSYN-------NPLSLL-NFAKCFKLNQEARDFIIQIPTSNDAVLPGAEVPAYFTHRATT 1132

Query: 879  GSSITV 884
            G+S+T+
Sbjct: 1133 GASLTI 1138


>gi|357499675|ref|XP_003620126.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495141|gb|AES76344.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1013

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 257/702 (36%), Positives = 382/702 (54%), Gaps = 69/702 (9%)

Query: 10  FLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSL 68
           +L+D+   D V+M+GI G+GGLGKTT+AR +Y++I  +FE   FL ++RE S+K GL  L
Sbjct: 204 YLLDTKFDDRVQMVGIYGIGGLGKTTLARAIYNMIGDKFECLCFLHDLRESSAKHGLEHL 263

Query: 69  QRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGS 128
           Q++LLS+ ++L D  + +V +GI ++  RL RKKVLL++DDV +++QLQ +AG  +WFG 
Sbjct: 264 QQKLLSKTVEL-DTKLGDVNEGIPIIKQRLGRKKVLLILDDVDNMRQLQVMAGGLDWFGP 322

Query: 129 GSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIR 188
           GS +IIT+RD+HLL +HG+   Y+   LN  E+L+LF  KAFK          +  R I 
Sbjct: 323 GSIVIITTRDQHLLTSHGIHRKYQVDALNRIESLELFRWKAFKDSIGDSRYDDILDRAIA 382

Query: 189 YAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLD 248
           YA GLPL LE++G  L G++++EW+S L+R E  P  EI +IL+ISFD L+E E+ +FLD
Sbjct: 383 YASGLPLVLELVGPALFGKNIEEWKSILDRYERIPNKEIQNILKISFDALEEDEQGVFLD 442

Query: 249 IACFFKGNDRDYVTNFLEGCGFHPV---IGIRVLIEKCLITV----HNNTLWMHDLLQEL 301
           IAC FKG D   V + L  C  H       I VL+EK LI +     +  + +HDL++++
Sbjct: 443 IACCFKGYDLGEVKDIL--CAHHGQSIEYHIGVLVEKTLIQIIHLGTDAVVTLHDLIEDM 500

Query: 302 GQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD----NYHHENEVYLCA 357
           G++IV+++SP+E GKRSRLW  E++  VL E++GT  +E I L         E E  +  
Sbjct: 501 GKEIVRQESPKEPGKRSRLWFYEDIVQVLEENSGTSQIEIIYLKFPLFEEEEEMEEEVEW 560

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI--- 414
                 KM NL+ L I N +     E L N LR+L W GYP ++LP +    K + I   
Sbjct: 561 KGDELKKMKNLKTLIIENGRFSRAPEQLPNSLRVLEWPGYPSQYLPHDF-CPKKLSICKL 619

Query: 415 ----YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYE 470
               +  +     L K   HL KL    L +SE L ++ D +G  NL +     C  L  
Sbjct: 620 PGNGFTSFELSSSLKKRFVHLKKLN---LDNSECLTQILDVSGLKNLVEFSFRKCENLVT 676

Query: 471 IHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGD 530
           IH S+   NKL IL+   C++L + P  + + SLE L          GL   ++L+    
Sbjct: 677 IHDSIGFLNKLKILDAYGCSNLKSFP-PLKLTSLEAL----------GLSYCNSLE---- 721

Query: 531 LKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN------CRSLEILP 584
                FPEI+  ME+++++   GT+I+ LP S + L+ L  L L          S+  +P
Sbjct: 722 ----RFPEILGKMENITDMFCVGTSIKELPFSFQNLTRLEKLRLWGDGKQILQSSILTMP 777

Query: 585 VTVSNLK-CL----------------RSLKLSGCSKLKKF-PEIVRSMKDLSELFLDGTS 626
             +++   CL                R L L  C+    F P I+    ++  L L   +
Sbjct: 778 KLLTDASGCLFPKQNAELSSIVPSDVRILGLPKCNPSDDFLPIILTWFANVEHLDLSWNN 837

Query: 627 IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
              +P  +E    L LLN++ CK L  +      LK L  L+
Sbjct: 838 FTVLPKCLEQCCLLSLLNVNSCKYLREIQGVPPKLKRLSALH 879



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 128/302 (42%), Gaps = 61/302 (20%)

Query: 611 VRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNL 669
           V  +K+L E  F    ++  +  SI  L KL++L+   C NL   P   + L SL+ L L
Sbjct: 657 VSGLKNLVEFSFRKCENLVTIHDSIGFLNKLKILDAYGCSNLKSFPP--LKLTSLEALGL 714

Query: 670 SGCFKLENVPETLGQIESLEELDISGTAVPH-STSWYSYIPINLMR---------KSVAL 719
           S C  LE  PE LG++E++ ++   GT++     S+ +   +  +R         +S  L
Sbjct: 715 SYCNSLERFPEILGKMENITDMFCVGTSIKELPFSFQNLTRLEKLRLWGDGKQILQSSIL 774

Query: 720 KLPSL----SGL--------------CSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLS 761
            +P L    SG                 +R L L  CN  +  LP  +    +++ L LS
Sbjct: 775 TMPKLLTDASGCLFPKQNAELSSIVPSDVRILGLPKCNPSDDFLPIILTWFANVEHLDLS 834

Query: 762 KNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCK 821
            N+F  LP  +     L  + +  CK L+ +  +PP ++++    C SL ++        
Sbjct: 835 WNNFTVLPKCLEQCCLLSLLNVNSCKYLREIQGVPPKLKRLSALHCKSLTSM-------- 886

Query: 822 SDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSS 881
                     S ++L N+ L      EY  A         +    +  PEWF +QN G S
Sbjct: 887 ----------SRRMLLNQEL-----HEYGGAEF-------IFTRSTRFPEWFEHQNRGPS 924

Query: 882 IT 883
           I+
Sbjct: 925 IS 926


>gi|240256404|ref|NP_199439.5| Disease resistance protein (TIR-NBS-LRR class) family protein
           [Arabidopsis thaliana]
 gi|332007978|gb|AED95361.1| Disease resistance protein (TIR-NBS-LRR class) family protein
           [Arabidopsis thaliana]
          Length = 1139

 Score =  357 bits (917), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 259/722 (35%), Positives = 377/722 (52%), Gaps = 86/722 (11%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV-----REISSKGG------ 64
           + +VRM+GI G  G+GKTTIAR +++ +S  F  S F+D       REI S+        
Sbjct: 211 AEEVRMVGIWGSSGIGKTTIARALFNQLSRHFPVSKFIDRAFVYKSREIFSRANPDDHNM 270

Query: 65  LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNRE 124
            + LQ +LLS++L++ D  I    D + +LG RLQ +KVL+++DD+ D   L SL G  +
Sbjct: 271 KLHLQEKLLSEILRMPDIKI----DHLGVLGERLQHQKVLIIVDDLDDQVILDSLVGQTQ 326

Query: 125 WFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSA 184
           WFGSGSRII  + ++H L+ H +D +Y+        AL +    AF+   P +    L  
Sbjct: 327 WFGSGSRIIAVTNNKHFLRAHEIDHIYEVSLPTQQHALAMLCQSAFRKKSPPEGFEMLVV 386

Query: 185 RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL-QELEK 243
           ++ R+   LPL L VLGS+L GR  + W   L RLE     +I  IL+IS+DGL  E +K
Sbjct: 387 QVARHVDSLPLGLNVLGSYLRGRDKEYWMEMLPRLENGLHDKIEKILRISYDGLGSEEDK 446

Query: 244 KIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQ 303
            IF  IAC F   +   +T+ L   G +  IG++ L++K +I V    + MH +LQE+G+
Sbjct: 447 AIFRHIACLFNHMEVTTITSLLTDLGIN--IGLKNLVDKSIIHVRRGCVEMHRMLQEMGR 504

Query: 304 QIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFS 363
           +IV+ QS ++ GKR  L    ++  VL+E  GT+ V GI L N    +E+Y+  S  AF 
Sbjct: 505 KIVRTQSIDKPGKREFLVDPNDISDVLSEGIGTQKVLGISL-NTGEIDELYVHES--AFK 561

Query: 364 KMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
            M+NLR L+I +        L LP  L+YL  RL+LL W  +P++ +PSN + +  + + 
Sbjct: 562 GMSNLRFLEIDSKNFGKAGRLYLPESLDYLPPRLKLLCWPNFPMRCMPSNFRPENLVTLK 621

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           M  S++ +LW+G+  L  LK M +  S NL  +PD +   NLE L L  C  L E+  S+
Sbjct: 622 MPNSKLHKLWEGVASLTCLKEMDMVGSSNLKEIPDLSMPTNLEILKLGFCKSLVELPSSI 681

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLP---TTISGLKCLSTLD 526
              NKL+ L+M+ C SL  LP    +KSL+ LN      L++ P   T IS L    T  
Sbjct: 682 RNLNKLLKLDMEFCHSLEILPTGFNLKSLDHLNFRYCSELRTFPEFSTNISVLMLFGT-- 739

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTAIRG---------------------------- 558
                   EFP    ++E+L EL L      G                            
Sbjct: 740 -----NIEEFP----NLENLVELSLSKEESDGKQWDGVKPLTPFLEMLSPTLKSLKLENI 790

Query: 559 -----LPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRS 613
                LP S + L+ L  L++  CR+LE LP  + NLK L  L   GCS+L+ FPEI   
Sbjct: 791 PSLVELPSSFQNLNQLKELSITYCRNLETLPTGI-NLKSLNYLCFKGCSQLRSFPEIS-- 847

Query: 614 MKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCF 673
             ++S L L+ T I+EVP  IE    L  L +  C  L  L  +I  +K+L  ++ S C 
Sbjct: 848 -TNISVLNLEETGIEEVPWQIENFFNLTKLTMRSCSKLKCLSLNIPKMKTLWDVDFSDCA 906

Query: 674 KL 675
            L
Sbjct: 907 AL 908



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 196/467 (41%), Gaps = 101/467 (21%)

Query: 496  PGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-T 554
            P  ++   +    L  L   ++ L CL  +D+ G    +E P++     +L  L L    
Sbjct: 614  PENLVTLKMPNSKLHKLWEGVASLTCLKEMDMVGSSNLKEIPDL-SMPTNLEILKLGFCK 672

Query: 555  AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
            ++  LP SI  L+ L+ L+++ C SLEILP T  NLK L  L    CS+L+ FPE     
Sbjct: 673  SLVELPSSIRNLNKLLKLDMEFCHSLEILP-TGFNLKSLDHLNFRYCSELRTFPEFS--- 728

Query: 615  KDLSELFLDGTSIKEVPSSIELLTKLEL-----------------------------LNL 645
             ++S L L GT+I+E P+ +E L +L L                             L L
Sbjct: 729  TNISVLMLFGTNIEEFPN-LENLVELSLSKEESDGKQWDGVKPLTPFLEMLSPTLKSLKL 787

Query: 646  SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWY 705
             +  +LV LPSS   L  LK L+++ C  LE +P  +  ++SL  L   G +   S    
Sbjct: 788  ENIPSLVELPSSFQNLNQLKELSITYCRNLETLPTGIN-LKSLNYLCFKGCSQLRS---- 842

Query: 706  SYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL-SKNS 764
                            P +S   S+  LNL +  + E  +P  I N  +L +L + S + 
Sbjct: 843  ---------------FPEISTNISV--LNLEETGIEE--VPWQIENFFNLTKLTMRSCSK 883

Query: 765  FVSLPTSITHLSKLLNIELEDCKRLQ--SLPQLPPNIRQVRVNGCASLVTLLDALKLCKS 822
               L  +I  +  L +++  DC  L   +L   P +      +   SL   LD  + C S
Sbjct: 884  LKCLSLNIPKMKTLWDVDFSDCAALTVVNLSGYPSDTLSEEEDD--SLDPFLD-FRGCFS 940

Query: 823  DSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSI 882
                   LD   +L  +S+ F+                S+  PG ++P +F Y+  G+S 
Sbjct: 941  -------LDPETVLHQESVIFN----------------SMAFPGEQVPSYFTYRTTGTST 977

Query: 883  TVTR----PSNLYNKKKLVGYAICCV---FHVLK---NSRGNNCFGS 919
             +      P+ L   +    + +C V   F+++    NSR    FG+
Sbjct: 978  ILPNIPLLPTQL--SQPFFRFRVCAVATAFNIVSIQVNSRFTGRFGN 1022


>gi|357513781|ref|XP_003627179.1| NBS resistance protein [Medicago truncatula]
 gi|355521201|gb|AET01655.1| NBS resistance protein [Medicago truncatula]
          Length = 1236

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 256/748 (34%), Positives = 396/748 (52%), Gaps = 77/748 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D     ++ L+ S  ++V++IG+ GMGG GKTT+A  ++  +S ++E S FL+ V E+S
Sbjct: 208 LDENYWSIQSLIKSDLTEVQIIGLWGMGGTGKTTLAAAMFQRVSFKYEGSCFLEKVTEVS 267

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            + G+     +LLS+LL+  D  I        M+  RL+R K  +VIDDV + + LQ+L 
Sbjct: 268 KRHGINYTCNKLLSKLLR-EDLDIDTSKLIPSMIMRRLKRMKSFIVIDDVHNSELLQNLI 326

Query: 121 G-NREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           G    W GSGS +I+T+RD+H+L + G++++Y+   +N   +LQLF++ AF    P    
Sbjct: 327 GVGHGWLGSGSTVIVTTRDKHVLISGGIEKIYEVKKMNSQNSLQLFSLNAFGKVSPKDGY 386

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V+LS R + YA G PLAL+VLGS L  +S  EW   L +L+  P +EI  I ++S++ L 
Sbjct: 387 VELSKRAVDYAKGNPLALKVLGSLLRCKSEIEWDCALAKLKEIPNTEIDFIFRLSYNELD 446

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLL 298
           + EK IFLDIACFFKG++R+ +T  L  CGF   IGI  L++K LI+V   N + MHDL+
Sbjct: 447 DKEKDIFLDIACFFKGHERNRITKILNECGFFADIGISNLLDKALISVDFENCIQMHDLI 506

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTES------------------------- 333
           QE G+QIV+ +S +  G+RSRL   +EVC+VL  +                         
Sbjct: 507 QETGKQIVREESLKNPGQRSRLCDPKEVCNVLKNNRVRDALTCLPIHMIFIYKMQLPTEI 566

Query: 334 --------TGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLK------ICNLQLP 379
                    G+E VE I LD        ++    ++F KM NLRLL       I ++ LP
Sbjct: 567 LTLRFTFLQGSENVESIFLDATEF---THINLRPESFEKMVNLRLLAFQDNKGIKSINLP 623

Query: 380 NGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMIL 439
           +GL+ L   LR   W GYPL+ LPS    +  +E+ +  S + +LW G+  L  L+++ L
Sbjct: 624 HGLDLLPENLRYFQWDGYPLQSLPSTFCPEMLVELSLKGSHVEKLWNGVLDLPNLEILDL 683

Query: 440 SHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI 499
             S+ LI  P+ +G+PNL+ +IL  C  + E+  S+ L  KL +LN+ +CTSL +L    
Sbjct: 684 GGSKKLIECPNVSGSPNLKHVILRYCESMPEVDSSIFLLQKLEVLNVFECTSLKSLSSNT 743

Query: 500 LMKSLEKL------NLKSLPTTISGLK----CLSTLDVSGDLKFREFPEIVEHMEHLSEL 549
              +L KL      NLK    T S +     CLS  D +      E P  + H ++L   
Sbjct: 744 CSPALRKLEARDCINLKEFSVTFSSVDGLDLCLSEWDRN------ELPSSILHKQNLKRF 797

Query: 550 HLE-GTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL------KCLRSLKLSGCS 602
                  +  LP   E  +  + L+    R  +   +T+  L      + ++ L      
Sbjct: 798 VFPISDCLVDLP---ENFADHISLSSPQNREDDPF-ITLDKLFSSPAFQSVKELTFIYIP 853

Query: 603 KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
            L +FP+ +  +  L  L LDG  I+ +P +I+ L +LE +++ DCK +  +P+     +
Sbjct: 854 ILSEFPDSISLLSSLKSLTLDGMDIRSLPETIKYLPRLERVDVYDCKMIQSIPA---LSQ 910

Query: 663 SLKTLNLSGCFKLENVPETLGQIESLEE 690
            +  L +S C  LE V  +   IE  EE
Sbjct: 911 FIPVLVVSNCESLEKVLSS--TIEPYEE 936



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 129/523 (24%), Positives = 211/523 (40%), Gaps = 78/523 (14%)

Query: 544  EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            E+L     +G  ++ LP S      LV L+LK    +E L   V +L  L  L L G  K
Sbjct: 631  ENLRYFQWDGYPLQSLP-STFCPEMLVELSLKGSH-VEKLWNGVLDLPNLEILDLGGSKK 688

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
            L + P +  S      +     S+ EV SSI LL KLE+LN+ +C +L  L S+  +  +
Sbjct: 689  LIECPNVSGSPNLKHVILRYCESMPEVDSSIFLLQKLEVLNVFECTSLKSLSSNTCS-PA 747

Query: 664  LKTLNLSGCFKLENVPETLGQIES----LEELD--------------------ISGTAVP 699
            L+ L    C  L+    T   ++     L E D                    IS   V 
Sbjct: 748  LRKLEARDCINLKEFSVTFSSVDGLDLCLSEWDRNELPSSILHKQNLKRFVFPISDCLVD 807

Query: 700  HSTSWYSYIPINLMRKS-----VAL-KLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLC 753
               ++  +I ++  +       + L KL S     S+++L      ++    P  I  L 
Sbjct: 808  LPENFADHISLSSPQNREDDPFITLDKLFSSPAFQSVKELTFIYIPIL-SEFPDSISLLS 866

Query: 754  SLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL 813
            SLK L L      SLP +I +L +L  +++ DCK +QS+P L   I  + V+ C SL  +
Sbjct: 867  SLKSLTLDGMDIRSLPETIKYLPRLERVDVYDCKMIQSIPALSQFIPVLVVSNCESLEKV 926

Query: 814  LDA-LKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQ---------HLSVV 863
            L + ++  +  +     L + K L   S   ++L++ ++ +              +    
Sbjct: 927  LSSTIEPYEEPNPCFIYLLNCKNLEPHSYQ-TVLKDAMDRIETGPSLYDDDEIIWYFLPA 985

Query: 864  VPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKN-SRGNNCFGSYPT 922
            +PG E   WF Y +    +T+  PSNL   +    Y +    H+  +   G  C+     
Sbjct: 986  MPGME--NWFHYSSTQVCVTLELPSNL---QGFSYYLVLSQGHMGYDVDFGCECY----- 1035

Query: 923  HQLNCHIGHGIYGIGFR-----------DKFGQAGSDHLWLLYLSRQTCYDIRLPLE--S 969
              L+   G  IY   F            D      SDHL   Y  + +C  I   +E   
Sbjct: 1036 --LDNSSGERIYITSFTRANFFSWLLRFDPSIHMISDHLVSWY-DQASCKQIMAAVEEIK 1092

Query: 970  NLEPFESNHVN--VSFEPWLGQGL----EVKMCGLHPVYMDEV 1006
            ++    S   N  ++F  ++ + L     +K CG H +Y +E 
Sbjct: 1093 SINDVNSTSCNPKLTFRFFIEEDLYDEVSIKECGFHWIYKEET 1135


>gi|145334739|ref|NP_001078715.1| putative WRKY transcription factor 52 [Arabidopsis thaliana]
 gi|10176997|dbj|BAB10247.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007840|gb|AED95223.1| putative WRKY transcription factor 52 [Arabidopsis thaliana]
          Length = 1187

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 256/709 (36%), Positives = 387/709 (54%), Gaps = 67/709 (9%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
           +R +GI GM G+GKTT+A+ V+D +S  F+AS F+++  +   + GL  L   L  QLL 
Sbjct: 172 IRCVGIWGMPGIGKTTLAKAVFDQMSSAFDASCFIEDYDKSIHEKGLYCL---LEEQLLP 228

Query: 79  LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
             D +I      +  L  RL  K+VL+V+DDV +    +S     +W G GS IIITSRD
Sbjct: 229 GNDATIMK----LSSLRDRLNSKRVLVVLDDVRNALVGESFLEGFDWLGPGSLIIITSRD 284

Query: 139 EHLLKTHGVDEVYKPHGLNYDEALQLFNMKA-FKTYQPLQECVQLSARIIRYAGGLPLAL 197
           + +    G++++Y+  GLN  EA QLF + A  K     Q   +LS R+I YA G PLA+
Sbjct: 285 KQVFCLCGINQIYEVQGLNEKEARQLFLLSASIKEDMGEQNLQELSVRVINYANGNPLAI 344

Query: 198 EVLGSFLSGRS-VDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGN 256
            V G  L G+  + E  +   +L+  PP +I+D  + ++D L + EK IFLDIACFF+G 
Sbjct: 345 SVYGRELKGKKKLSEMETAFLKLKRRPPFKIVDAFKSTYDTLSDNEKNIFLDIACFFQGE 404

Query: 257 DRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGK 316
           + +YV   LEGCGF P + I VL++KCL+T+  N +W+H L Q++G++I+  ++  ++ +
Sbjct: 405 NVNYVIQLLEGCGFFPHVEIDVLVDKCLVTISENRVWLHKLTQDIGREIINGETV-QIER 463

Query: 317 RSRLWKEEEVCHVL---------------TESTGTELVEGIVLDNYHHENEVYLCASAKA 361
           R RLW+   + ++L                 + G+E +EG+ LD  +   ++       A
Sbjct: 464 RRRLWEPWSIKYLLEYNEHKANGEPKTTFKRAQGSEEIEGLFLDTSNLRFDL----QPSA 519

Query: 362 FSKMTNLRLLKI-CN-------LQLPNG-LEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
           F  M NLRLLKI C+       +  P G L  L N LRLL W  YPLK LP N      +
Sbjct: 520 FKNMLNLRLLKIYCSNPEVHPVINFPTGSLHSLPNELRLLHWENYPLKSLPQNFDPRHLV 579

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
           EI M YS++ +LW G K+L+ L+ + L HS +L+ + D   A NLE + L+GCTRL    
Sbjct: 580 EINMPYSQLQKLWGGTKNLEMLRTIRLCHSHHLVDIDDLLKAENLEVIDLQGCTRLQNF- 638

Query: 473 PSLLLHNKLIILNMKDC---TSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG 529
           P+     +L ++N+  C    S++ +P  I    L+   + +LP +         ++   
Sbjct: 639 PAAGRLLRLRVVNLSGCIKIKSVLEIPPNIEKLHLQGTGILALPVSTVKPNHRELVNF-- 696

Query: 530 DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSN 589
                E P + E +E L+ L LE  +      S + L  L+ L LK+C  L+ LP  ++N
Sbjct: 697 ---LTEIPGLSEELERLTSL-LESNS------SCQDLGKLICLELKDCSCLQSLP-NMAN 745

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK 649
           L  L  L LSGCS L       R +K   +L+L GT+I+EVP   +L   LE+LN +   
Sbjct: 746 LD-LNVLDLSGCSSLNSIQGFPRFLK---QLYLGGTAIREVP---QLPQSLEILN-AHGS 797

Query: 650 NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
            L  LP ++  L+ LK L+LSGC +LE +    G   +L+EL  +GT +
Sbjct: 798 CLRSLP-NMANLEFLKVLDLSGCSELETIQ---GFPRNLKELYFAGTTL 842



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 52/83 (62%), Gaps = 1/83 (1%)

Query: 229  DILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH 288
            ++L++S+D LQE++K +FL IA  F   D D+V   + G       G++VL +  LI+V 
Sbjct: 1085 EVLRVSYDDLQEMDKVLFLYIASLFNDEDVDFVAPLIAGIDLDVSSGLKVLADVSLISVS 1144

Query: 289  NN-TLWMHDLLQELGQQIVQRQS 310
            +N  + MH L +++G++I+  QS
Sbjct: 1145 SNGEIVMHSLQRQMGKEILHGQS 1167



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 37/175 (21%)

Query: 640 LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP 699
           LE+++L  C  L   P++   L+ L+ +NLSGC K+++V E    IE L        A+P
Sbjct: 624 LEVIDLQGCTRLQNFPAAGRLLR-LRVVNLSGCIKIKSVLEIPPNIEKLHLQGTGILALP 682

Query: 700 HSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELY 759
            ST      P +    +   ++P LS                      ++  L SL    
Sbjct: 683 VST----VKPNHRELVNFLTEIPGLS---------------------EELERLTSL---- 713

Query: 760 LSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPP-NIRQVRVNGCASLVTL 813
           L  NS      S   L KL+ +EL+DC  LQSLP +   ++  + ++GC+SL ++
Sbjct: 714 LESNS------SCQDLGKLICLELKDCSCLQSLPNMANLDLNVLDLSGCSSLNSI 762


>gi|40644189|emb|CAC95124.1| TIR/NBS/LRR protein [Populus deltoides]
          Length = 1147

 Score =  357 bits (915), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 258/712 (36%), Positives = 389/712 (54%), Gaps = 51/712 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD     +   + + + DVR++GI GM G+GKTTIA+ V++ + + FE S FL ++ E S
Sbjct: 219 MDQLARNIFDFLSAATDDVRIVGIHGMPGIGKTTIAQAVFNQLCYGFEGSCFLSSINERS 278

Query: 61  SK-GGLVSLQRQLLSQLLKLADNSIWNVFD-GIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            +  GLV LQ+QL   +LK  D + ++  D G  ++  RL+RK+VL+V DDV  ++QL +
Sbjct: 279 KQVNGLVPLQKQLHHDILK-QDVANFDCADRGKVLIKERLRRKRVLVVADDVAHLEQLNA 337

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G+R WFG GSR+IIT+RD +LL+    D++Y+   L  DE+LQLF+  AFK  +P Q+
Sbjct: 338 LMGDRSWFGPGSRVIITTRDSNLLRE--ADQIYQIEELKPDESLQLFSRHAFKDSKPAQD 395

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
            ++LS + + Y GGLPLALEV+G+ L  ++     S ++ L   P  +I   L IS+  L
Sbjct: 396 YIELSKKAVGYCGGLPLALEVIGALLYRKNRGRCVSEIDNLSRIPNQDIQGKLLISYHAL 455

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNNTLWMHDL 297
               ++ FLDIACFF G +R+YVT  L   C  +P + +  L E+ LI V   T+ MHDL
Sbjct: 456 DGELQRAFLDIACFFIGIEREYVTKVLGARCRPNPEVVLETLSERSLIQVFGETVSMHDL 515

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTEST--GTELVEGIVLDNYHHENEVYL 355
           L+++G+++V + SP++ GKR+R+W +E+  +VL +    GT++V+G+ LD    E +   
Sbjct: 516 LRDMGREVVCKASPKQPGKRTRIWNQEDAWNVLEQQKVRGTDVVKGLALDVRASEAK--- 572

Query: 356 CASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
             SA +F++M  L LL+I  + L   L+  S  L  + W   PLK+LP +  +D    + 
Sbjct: 573 SLSAGSFAEMKCLNLLQINGVHLTGSLKLFSKELMWICWHECPLKYLPFDFTLDNLAVLD 632

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAP----NLEKLILEGCTRLYEI 471
           M YS + ELWKG K              N+++ P F         LEKL L+GC+ L E+
Sbjct: 633 MQYSNLKELWKGKK------------VRNMLQSPKFLQYVIYIYILEKLNLKGCSSLVEV 680

Query: 472 HPSLLLHNKLIILNMKDCTSLITLPGKI-LMKSLEKLN------LKSLPTTISGLKCLST 524
           H S+     L  LN++ C  L  LP  I  +KSLE LN      L+ LP ++  ++ L  
Sbjct: 681 HQSIGNLTSLDFLNLEGCWRLKNLPESIGNVKSLETLNISGCSQLEKLPESMGDMESLIE 740

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
           L   G ++  +F   +  ++H+  L L G +    P S  L+S  V LNLK       LP
Sbjct: 741 LLADG-IENEQFLSSIGQLKHVRRLSLRGYS--STPPSSSLISAGV-LNLKRW-----LP 791

Query: 585 VTVSNLKCLRSLKL--SGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL 642
            +      ++ L+L   G S           +  L  L L G     +PS I  L+KL+ 
Sbjct: 792 TSFIQWISVKRLELPHGGLSDRAAKCVDFSGLSALEVLDLIGNKFSSLPSGIGFLSKLKF 851

Query: 643 LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
           L++  CK LV +P       SL  L+ S C  LE V      IE  +ELDI+
Sbjct: 852 LSVKACKYLVSIPD---LPSSLDCLDASYCKSLERVRIP---IEPKKELDIN 897



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 143/486 (29%), Positives = 217/486 (44%), Gaps = 80/486 (16%)

Query: 579  SLEILPVTVSNLKCL-RSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIEL 636
            +L +L +  SNLK L +  K+    +  KF + V  +  L +L L G +S+ EV  SI  
Sbjct: 627  NLAVLDMQYSNLKELWKGKKVRNMLQSPKFLQYVIYIYILEKLNLKGCSSLVEVHQSIGN 686

Query: 637  LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG- 695
            LT L+ LNL  C  L  LP SI  +KSL+TLN+SGC +LE +PE++G +ESL EL   G 
Sbjct: 687  LTSLDFLNLEGCWRLKNLPESIGNVKSLETLNISGCSQLEKLPESMGDMESLIELLADGI 746

Query: 696  -----------------------TAVPHSTSWYSYIPINLMRKSVALKLP-SLSGLCSLR 731
                                   ++ P S+S  S   +NL R      LP S     S++
Sbjct: 747  ENEQFLSSIGQLKHVRRLSLRGYSSTPPSSSLISAGVLNLKR-----WLPTSFIQWISVK 801

Query: 732  KLNLTDCNLMEGALPS-DIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQ 790
            +L L    L + A    D   L +L+ L L  N F SLP+ I  LSKL  + ++ CK L 
Sbjct: 802  RLELPHGGLSDRAAKCVDFSGLSALEVLDLIGNKFSSLPSGIGFLSKLKFLSVKACKYLV 861

Query: 791  SLPQLPPNIRQVRVNGCASLVTL---------LDALKLCKSDS--------TMIACLDSL 833
            S+P LP ++  +  + C SL  +         LD + L KS S         +   + SL
Sbjct: 862  SIPDLPSSLDCLDASYCKSLERVRIPIEPKKELD-INLYKSHSLEEIQGIEGLSNNIWSL 920

Query: 834  KLLGNKSLAFSMLREYLEAVSNTRQHLSV-VVPGSEIPEWFMYQNEGSSITVTRPSNLYN 892
            ++  ++     + +  +EA+ N R    +  +PG  +P W  Y  EG S++   P   + 
Sbjct: 921  EVDTSRHSPNKLQKSVVEAICNGRHRYCIHGIPGGNMPNWMSYSGEGCSLSFHIPPVFH- 979

Query: 893  KKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIG-FRDKFGQAGSDHLW 951
                 G     VF  L+          Y    +   I +   GI  F+DK  Q      W
Sbjct: 980  -----GLVRWFVFRPLEMD-----VRYYFHTNIISIIRNKSNGIQLFKDK--QIAGAGGW 1027

Query: 952  LLYLSRQT------CYDIRLPLE-SNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVY-- 1002
            + Y+SR        C D  L L  S++   ++ +  +  +P     + VK CG+H +   
Sbjct: 1028 IRYISRSEMAMEDYCGDDELELYISSVPSLDAVYNGLQVKP-----VHVKECGVHVIAGK 1082

Query: 1003 MDEVEE 1008
            +D  EE
Sbjct: 1083 LDSFEE 1088


>gi|27764547|gb|AAO23077.1| R 8 protein [Glycine max]
          Length = 892

 Score =  357 bits (915), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 233/585 (39%), Positives = 327/585 (55%), Gaps = 30/585 (5%)

Query: 1   MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++S   ++  L+D GS DV  +IGI GMGGLGKTT+A  V++ I+  F+ S FL NVRE 
Sbjct: 191 LESEVTEVMKLLDVGSHDVVHIIGIHGMGGLGKTTLALAVHNFIALHFDESCFLQNVREE 250

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  LLS+LL   D ++ +  +G  M+  RLQRKKVLL++DDV   +QL+++
Sbjct: 251 SNKHGLKHLQSILLSKLLGEKDITLTSWQEGASMIQHRLQRKKVLLILDDVDKRQQLKAI 310

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G  +WFG GSR+IIT+RD+HLLK H V+  Y+   LN   ALQL    AFK  +     
Sbjct: 311 VGRPDWFGPGSRVIITTRDKHLLKYHEVERTYEVKVLNQSAALQLLTWNAFKREKIDPSY 370

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R++ YA GLPLALEV+GS L  ++V EW S +E  +  P  EI +IL++SFD L 
Sbjct: 371 EDVLNRVVTYASGLPLALEVIGSNLFEKTVAEWESAMEHYKRIPSDEIQEILKVSFDALG 430

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLE----GCGFHPVIGIRVLIEKCLITVH-NNTLWM 294
           E +K +FLDIAC FKG +   V N L      C  H    I VL+EK L+ V   +T+ M
Sbjct: 431 EEQKNVFLDIACCFKGYEWTEVDNILRDLYGNCTKH---HIGVLVEKSLVKVSCCDTVEM 487

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           HD++Q++G++I +++SPEE GK  RL   +++  VL ++TGT  +E I LD    + E  
Sbjct: 488 HDMIQDMGREIERQRSPEEPGKCKRLLLPKDIIQVLKDNTGTSKIEIICLDFSISDKEET 547

Query: 355 LCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
           +  +  AF KM NL++L I N +   G  Y    LR+L W  YP   LPSN      +  
Sbjct: 548 VEWNENAFMKMKNLKILIIRNCKFSKGPNYFPEGLRVLEWHRYPSNCLPSNFDPINLVIC 607

Query: 415 YMCYSRIG--ELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
            +  S I   E     K L  L V+     E L ++PD +  PNL++L    C  L  + 
Sbjct: 608 KLPDSSITSFEFHGSSKKLGHLTVLNFDRCEFLTKIPDVSDLPNLKELSFNWCESLVAVD 667

Query: 473 PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
            S+   NKL  L+   C  L + P          LNL S          L TL++ G   
Sbjct: 668 DSIGFLNKLKTLSAYGCRKLTSFP---------PLNLTS----------LETLNLGGCSS 708

Query: 533 FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNC 577
              FPEI+  M++++ L L    I+ LP S + L GL+ L L +C
Sbjct: 709 LEYFPEILGEMKNITVLALHDLPIKELPFSFQNLIGLLFLWLDSC 753



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 105/254 (41%), Gaps = 38/254 (14%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
           L  L    C  L K P+ V  + +L EL  +   S+  V  SI  L KL+ L+   C+ L
Sbjct: 629 LTVLNFDRCEFLTKIPD-VSDLPNLKELSFNWCESLVAVDDSIGFLNKLKTLSAYGCRKL 687

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL---DISGTAVPHSTS----- 703
              P   + L SL+TLNL GC  LE  PE LG+++++  L   D+    +P S       
Sbjct: 688 TSFPP--LNLTSLETLNLGGCSSLEYFPEILGEMKNITVLALHDLPIKELPFSFQNLIGL 745

Query: 704 ---WYSYIPINLMRKSVALKLPSLSGLC----------------------SLRKLNLTDC 738
              W     I  +R S+A  +P L   C                      S+     TDC
Sbjct: 746 LFLWLDSCGIVQLRCSLA-TMPKLCEFCITDSCNRWQWVESEEGEEKVVGSILSFEATDC 804

Query: 739 NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPN 798
           NL +            +  L L  N+F  LP     L  L  + + DCK LQ +  LPPN
Sbjct: 805 NLCDDFFFIGSKRFAHVGYLNLPGNNFTILPEFFKELQFLTTLVVHDCKHLQEIRGLPPN 864

Query: 799 IRQVRVNGCASLVT 812
           ++      CASL +
Sbjct: 865 LKHFDARNCASLTS 878


>gi|145358882|ref|NP_199339.2| putative WRKY transcription factor 52 [Arabidopsis thaliana]
 gi|76803833|sp|Q9FH83.3|WRK52_ARATH RecName: Full=Probable WRKY transcription factor 52; AltName:
           Full=Disease resistance protein RRS1; AltName:
           Full=Disease resistance protein SLH1; AltName:
           Full=Protein SENSITIVE TO LOW HUMIDITY 1; AltName:
           Full=Resistance to Ralstonia solanacearum 1 protein;
           AltName: Full=WRKY DNA-binding protein 52
 gi|110741008|dbj|BAE98598.1| disease resistance like protein [Arabidopsis thaliana]
 gi|332007839|gb|AED95222.1| putative WRKY transcription factor 52 [Arabidopsis thaliana]
          Length = 1288

 Score =  357 bits (915), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 256/709 (36%), Positives = 386/709 (54%), Gaps = 67/709 (9%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
           +R +GI GM G+GKTT+A+ V+D +S  F+AS F+++  +   + GL  L   L  QLL 
Sbjct: 172 IRCVGIWGMPGIGKTTLAKAVFDQMSSAFDASCFIEDYDKSIHEKGLYCL---LEEQLLP 228

Query: 79  LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
             D +I      +  L  RL  K+VL+V+DDV +    +S     +W G GS IIITSRD
Sbjct: 229 GNDATIMK----LSSLRDRLNSKRVLVVLDDVRNALVGESFLEGFDWLGPGSLIIITSRD 284

Query: 139 EHLLKTHGVDEVYKPHGLNYDEALQLFNMKA-FKTYQPLQECVQLSARIIRYAGGLPLAL 197
           + +    G++++Y+  GLN  EA QLF + A  K     Q   +LS R+I YA G PLA+
Sbjct: 285 KQVFCLCGINQIYEVQGLNEKEARQLFLLSASIKEDMGEQNLQELSVRVINYANGNPLAI 344

Query: 198 EVLGSFLSGRS-VDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGN 256
            V G  L G+  + E  +   +L+  PP +I+D  + ++D L + EK IFLDIACFF+G 
Sbjct: 345 SVYGRELKGKKKLSEMETAFLKLKRRPPFKIVDAFKSTYDTLSDNEKNIFLDIACFFQGE 404

Query: 257 DRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGK 316
           + +YV   LEGCGF P + I VL++KCL+T+  N +W+H L Q++G++I+  ++  ++ +
Sbjct: 405 NVNYVIQLLEGCGFFPHVEIDVLVDKCLVTISENRVWLHKLTQDIGREIINGETV-QIER 463

Query: 317 RSRLWKEEEVCHVL---------------TESTGTELVEGIVLDNYHHENEVYLCASAKA 361
           R RLW+   + ++L                 + G+E +EG+ LD     + +       A
Sbjct: 464 RRRLWEPWSIKYLLEYNEHKANGEPKTTFKRAQGSEEIEGLFLDT----SNLRFDLQPSA 519

Query: 362 FSKMTNLRLLKI-CN-------LQLPNG-LEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
           F  M NLRLLKI C+       +  P G L  L N LRLL W  YPLK LP N      +
Sbjct: 520 FKNMLNLRLLKIYCSNPEVHPVINFPTGSLHSLPNELRLLHWENYPLKSLPQNFDPRHLV 579

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
           EI M YS++ +LW G K+L+ L+ + L HS +L+ + D   A NLE + L+GCTRL    
Sbjct: 580 EINMPYSQLQKLWGGTKNLEMLRTIRLCHSHHLVDIDDLLKAENLEVIDLQGCTRLQNF- 638

Query: 473 PSLLLHNKLIILNMKDC---TSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG 529
           P+     +L ++N+  C    S++ +P  I    L+   + +LP +         ++   
Sbjct: 639 PAAGRLLRLRVVNLSGCIKIKSVLEIPPNIEKLHLQGTGILALPVSTVKPNHRELVNF-- 696

Query: 530 DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSN 589
                E P + E +E L+ L LE  +      S + L  L+ L LK+C  L+ LP  ++N
Sbjct: 697 ---LTEIPGLSEELERLTSL-LESNS------SCQDLGKLICLELKDCSCLQSLP-NMAN 745

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK 649
           L  L  L LSGCS L       R +K   +L+L GT+I+EVP   +L   LE+LN +   
Sbjct: 746 LD-LNVLDLSGCSSLNSIQGFPRFLK---QLYLGGTAIREVP---QLPQSLEILN-AHGS 797

Query: 650 NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
            L  LP ++  L+ LK L+LSGC +LE +    G   +L+EL  +GT +
Sbjct: 798 CLRSLP-NMANLEFLKVLDLSGCSELETIQ---GFPRNLKELYFAGTTL 842



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 55/90 (61%), Gaps = 3/90 (3%)

Query: 224  PSEI--LDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIE 281
            P E+   ++L++S+D LQE++K +FL IA  F   D D+V   + G       G++VL +
Sbjct: 1078 PVEVSGYEVLRVSYDDLQEMDKVLFLYIASLFNDEDVDFVAPLIAGIDLDVSSGLKVLAD 1137

Query: 282  KCLITVHNN-TLWMHDLLQELGQQIVQRQS 310
              LI+V +N  + MH L +++G++I+  QS
Sbjct: 1138 VSLISVSSNGEIVMHSLQRQMGKEILHGQS 1167



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 37/175 (21%)

Query: 640 LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP 699
           LE+++L  C  L   P++   L+ L+ +NLSGC K+++V E    IE L        A+P
Sbjct: 624 LEVIDLQGCTRLQNFPAAGRLLR-LRVVNLSGCIKIKSVLEIPPNIEKLHLQGTGILALP 682

Query: 700 HSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELY 759
            ST      P +    +   ++P LS                      ++  L SL    
Sbjct: 683 VST----VKPNHRELVNFLTEIPGLS---------------------EELERLTSL---- 713

Query: 760 LSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPP-NIRQVRVNGCASLVTL 813
           L  NS      S   L KL+ +EL+DC  LQSLP +   ++  + ++GC+SL ++
Sbjct: 714 LESNS------SCQDLGKLICLELKDCSCLQSLPNMANLDLNVLDLSGCSSLNSI 762


>gi|357517699|ref|XP_003629138.1| TMV resistance protein N [Medicago truncatula]
 gi|355523160|gb|AET03614.1| TMV resistance protein N [Medicago truncatula]
          Length = 1084

 Score =  357 bits (915), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 217/579 (37%), Positives = 341/579 (58%), Gaps = 26/579 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEA-SGFLDNVREI 59
           ++SR +K+   +D+ S+ V MIGI GMGG GKTT A+ +Y+ I   FE  + F +++RE+
Sbjct: 188 LESRVQKITKFIDNQSNKVCMIGIWGMGGSGKTTTAKAIYNKIHRRFEGRTSFFESIREV 247

Query: 60  --SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
             ++  G++ LQ+QLL  LL++    I ++  G+  +  RL+ +K  +V+DDV   +QL+
Sbjct: 248 CDNNSRGVIHLQQQLLLDLLQIK-QEIHSIALGMTKIEKRLRGQKAFIVLDDVTTPEQLK 306

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
           +L  + + FGSGS +IIT+RD  LL +   D ++    ++  ++L+LF   AF+   P +
Sbjct: 307 ALCADPKLFGSGSVLIITTRDARLLNSLSDDHIFTMTEMDKYQSLELFCWHAFQQPNPRE 366

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
              +L+ +++ Y GGLPLALEVLGS+LS R   EW+S L +LE  P +++   L+IS+DG
Sbjct: 367 GFCELTKKVVAYCGGLPLALEVLGSYLSMRKKLEWKSALSKLEKIPNNQVQQKLRISYDG 426

Query: 238 LQEL-EKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMH 295
           L++  EK IFLDI CFF G +R  VT  L GCG H  IGI VLIE+ LI V  NN L MH
Sbjct: 427 LEDYTEKDIFLDICCFFIGKNRADVTEILNGCGLHADIGIVVLIERSLIKVDKNNKLQMH 486

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DLL+++G+ IV   S +E  K SRLW  ++V  VL++ TGT+ +EG++L        ++ 
Sbjct: 487 DLLRDMGRAIVGEISVKEPAKHSRLWFHDDVLDVLSKKTGTDTIEGMILKCQRTGRIIF- 545

Query: 356 CASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
                +F +M  LRLLK+  + L      +S +LR + W+    KF+P++  ++  +   
Sbjct: 546 --GTNSFQEMQKLRLLKLDGVHLMGDYGLISKQLRWVDWQRSTFKFIPNDFDLENLVVFE 603

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           + +  + ++W+  K LDKLK++ LSHS+ L   PDF   PNLEKLI++ C  L E+H S+
Sbjct: 604 LKHGNVRQVWQETKLLDKLKILNLSHSKYLKSTPDFAKLPNLEKLIMKDCQSLSEVHTSI 663

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
                L+++N KDCTS                 L +LP  +  ++ + +L +SG     +
Sbjct: 664 GDLKNLLLINFKDCTS-----------------LGNLPKEVYKVRSVKSLILSGCSMIDK 706

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL 574
             E +  ME L+ L    T I+ +P SI     +  ++L
Sbjct: 707 LEEDILQMESLTTLIAANTGIKQVPYSIARSKSIAYISL 745



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 157/379 (41%), Gaps = 59/379 (15%)

Query: 566 LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DG 624
           L  LV+  LK+    ++   T   L  L+ L LS    LK  P+  + + +L +L + D 
Sbjct: 596 LENLVVFELKHGNVRQVWQET-KLLDKLKILNLSHSKYLKSTPDFAK-LPNLEKLIMKDC 653

Query: 625 TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQ 684
            S+ EV +SI  L  L L+N  DC +L  LP  +  ++S+K+L LSGC  ++ + E + Q
Sbjct: 654 QSLSEVHTSIGDLKNLLLINFKDCTSLGNLPKEVYKVRSVKSLILSGCSMIDKLEEDILQ 713

Query: 685 IESLEELDISGTAVPHSTSWYSYIPINLMR-KSVALKLPSLSGLCSLRKLNLTDCNLMEG 743
           +ESL  L  + T +         +P ++ R KS+A        LC    L+   C++   
Sbjct: 714 MESLTTLIAANTGIKQ-------VPYSIARSKSIA-----YISLCGYEGLS---CDVFPS 758

Query: 744 ALPSDI--------------GNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRL 789
            + S +              GN  SL  L +  N+       +T LSKL  + ++ C   
Sbjct: 759 LIWSWMSPTINSLSLIHPFAGNSLSLVSLDVESNNMDYQSPMLTVLSKLRCVWVQ-CHSE 817

Query: 790 QSLPQ---------LPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKS 840
             L Q            N  ++        +T +    +     +    LD+L    +KS
Sbjct: 818 NQLTQELRRFIDDLYDVNFTELETTSYGHQITNISLKSIGIGMGSSQIVLDTL----DKS 873

Query: 841 LAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYA 900
           LA  +      A +++   L    PG   P W  Y+ EG S+    P N  +   + G  
Sbjct: 874 LAQGL------ATNSSDSFL----PGDNYPSWLAYKCEGPSVLFQVPEN--SSSCMKGVT 921

Query: 901 ICCVFHVLKNSRGNNCFGS 919
           +C V+     +  + C  S
Sbjct: 922 LCVVYSSTPQNLISECLTS 940


>gi|357499381|ref|XP_003619979.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355494994|gb|AES76197.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1033

 Score =  357 bits (915), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 233/624 (37%), Positives = 359/624 (57%), Gaps = 43/624 (6%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + SR  ++  L + GS+D V MIGI G GG+GKTT+A+ VY+LI+++FE   FL NVRE 
Sbjct: 202 LKSRISEVNSLSELGSNDGVCMIGILGTGGMGKTTLAQAVYNLIANQFECKCFLHNVREN 261

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S K GL  LQ QLLS+ +   +    +V +GI ++  RL +KKVLL++DDV  +KQLQ L
Sbjct: 262 SVKHGLEYLQEQLLSKSIGF-ETKFGHVNEGIPIIKRRLYQKKVLLILDDVDKIKQLQVL 320

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G   W G GSR+IIT+RD+HLL  HG+ ++Y+  GLN ++AL+L  M AFK+ +     
Sbjct: 321 IGEPGWLGRGSRVIITTRDKHLLSCHGIKKIYEADGLNKEQALELLRMMAFKSNKNDSRY 380

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R ++YA GLPLALEV+GS L G+++ E  S L++ E  P  +I  IL++SFD L 
Sbjct: 381 DSILNRAVKYAAGLPLALEVVGSNLFGKTIAECESLLDKYERIPHEDIQKILKVSFDALD 440

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFL-EGCGFHPVIGIRVLIEKCLITVHNNT---LWMH 295
           E ++ +FLDI C FKG+  +Y+ N L +  G+     +RVL++K LI +  N    + +H
Sbjct: 441 EEQQNVFLDIVCVFKGHPEEYIQNLLHDHYGYCIKSHLRVLVDKSLIKIKANYYCGVTLH 500

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DL++++G +I++++S  E G+RSRLW  +++ HVL E+TGT  +E I LD    ++    
Sbjct: 501 DLIEDMGIEIIRQESIREPGERSRLWSRDDIVHVLQENTGTSKIEMIYLDRSIAKH--LR 558

Query: 356 CASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
             +   F KMTNL+ L I +     G  +               K+LPS+L++   +E  
Sbjct: 559 GMNEMVFKKMTNLKTLHIQSYAFTEGPNFSKGP-----------KYLPSSLRI---LECN 604

Query: 416 MCYSR-IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
            C S  +   +   K  + +K++ L +S+ L  +PD +G PNL+    +GC RL  IH S
Sbjct: 605 GCTSESLSSCFSNKKKFNNMKILTLDNSDYLTHIPDVSGLPNLKNFSFQGCVRLITIHNS 664

Query: 475 LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFR 534
           +   NKL ILN + C  L + P  + + SLE+L L          +C S          +
Sbjct: 665 VGYLNKLKILNAEYCEQLESFPS-LQLPSLEELKLS---------ECES---------LK 705

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
            FPE++  M ++ E+ +  T+I  LP S   LS L  L + +  + +ILP  +S    L 
Sbjct: 706 SFPELLCKMTNIKEITIYETSIGELPFSFGNLSELRRLIIFS-DNFKILPECLSECHHLV 764

Query: 595 SLKLSGCSKLKKFPEIVRSMKDLS 618
            + + GC  L++   I  +++ LS
Sbjct: 765 EVIVDGCYSLEEIRGIPPNLERLS 788



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 95/430 (22%), Positives = 170/430 (39%), Gaps = 111/430 (25%)

Query: 539 IVEHMEHLSELHLEGTAIRGLPLSIE----LLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
           + + M +L  LH++  A    P   +    L S L +L    C S E L    SN K   
Sbjct: 564 VFKKMTNLKTLHIQSYAFTEGPNFSKGPKYLPSSLRILECNGCTS-ESLSSCFSNKKKFN 622

Query: 595 SLK---LSGCSKLKKFPEI--VRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK 649
           ++K   L     L   P++  + ++K+ S  F     +  + +S+  L KL++LN   C+
Sbjct: 623 NMKILTLDNSDYLTHIPDVSGLPNLKNFS--FQGCVRLITIHNSVGYLNKLKILNAEYCE 680

Query: 650 NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIP 709
            L   PS  + L SL+ L LS C  L++ PE L ++ +++E+ I  T++           
Sbjct: 681 QLESFPS--LQLPSLEELKLSECESLKSFPELLCKMTNIKEITIYETSI----------- 727

Query: 710 INLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLP 769
                                            G LP   GNL  L+ L +  ++F  LP
Sbjct: 728 ---------------------------------GELPFSFGNLSELRRLIIFSDNFKILP 754

Query: 770 TSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVT----LLDALKLCKSDST 825
             ++    L+ + ++ C  L+ +  +PPN+ ++    C SL +    +L + KL K+  T
Sbjct: 755 ECLSECHHLVEVIVDGCYSLEEIRGIPPNLERLSAVDCESLSSASRRMLLSQKLNKAGCT 814

Query: 826 MIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVT 885
            I                               H      G  IP+WF +Q  G +I+  
Sbjct: 815 YI-------------------------------HFPNKTEG--IPDWFEHQTRGDTIS-- 839

Query: 886 RPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQA 945
                + ++K+   +I C+F +       + F   P + L  + G+  +   + + +   
Sbjct: 840 ----FWFRRKIP--SITCIFLI-------SGFAELPKYNLFVN-GYQCFSSIYDEIYDGL 885

Query: 946 GSDHLWLLYL 955
              H +L+YL
Sbjct: 886 SMIHAFLIYL 895


>gi|30681996|ref|NP_192939.2| putative WRKY transcription factor 19 [Arabidopsis thaliana]
 gi|332657684|gb|AEE83084.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
          Length = 1798

 Score =  356 bits (913), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 244/667 (36%), Positives = 366/667 (54%), Gaps = 49/667 (7%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MD + E++  L+   S DVR IGI G  G+GKTTIA  ++  IS ++E    L ++ +  
Sbjct: 819  MDMQVEEILSLLCIESLDVRSIGIWGTVGIGKTTIAEEIFRKISVQYETCVVLKDLHKEV 878

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
               G  +++   LS++L++  + I         L SRLQRK++L+++DDV D + + +  
Sbjct: 879  EVKGHDAVRENFLSEVLEVEPHVIRISDIKTSFLRSRLQRKRILVILDDVNDYRDVDTFL 938

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            G   +FG GSRII+TSR+  +     +D VY+   L+  ++L L +    +     +   
Sbjct: 939  GTLNYFGPGSRIIMTSRNRRVFVLCKIDHVYEVKPLDIPKSLLLLDRGTCQIVLSPEVYK 998

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVD-EWRSTLERLEIEPPSEILDILQISFDGLQ 239
             LS  +++++ G P  L+    FLS  S+D EW    + ++   P  I  I + S  GL 
Sbjct: 999  TLSLELVKFSNGNPQVLQ----FLS--SIDREWNKLSQEVKTTSPIYIPGIFEKSCCGLD 1052

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLL 298
            + E+ IFLDIACFF   D+D V   L+GCGF   +G R L++K L+T+  +N + M   +
Sbjct: 1053 DNERGIFLDIACFFNRIDKDNVAMLLDGCGFSAHVGFRGLVDKSLLTISQHNLVDMLSFI 1112

Query: 299  QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
            Q  G++IV+++S +  G RSRLW  + + HV    TGT  +EGI LD  +    +   A+
Sbjct: 1113 QATGREIVRQESADRPGDRSRLWNADYIRHVFINDTGTSAIEGIFLDMLN----LKFDAN 1168

Query: 359  AKAFSKMTNLRLLKI-CN-------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK 410
               F KM NLRLLK+ C+       +  P GLEYL ++LRLL W  YPL  LP +   + 
Sbjct: 1169 PNVFEKMCNLRLLKLYCSKAEEKHGVSFPQGLEYLPSKLRLLHWEYYPLSSLPKSFNPEN 1228

Query: 411  TIEIYMCYSRIGELWKGIK--------HLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
             +E+ +  S   +LWKG K         L+KLK M LS+S+ L ++P  + A NLE + L
Sbjct: 1229 LVELNLPSSCAKKLWKGKKARFCTTNSSLEKLKKMRLSYSDQLTKIPRLSSATNLEHIDL 1288

Query: 463  EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCL 522
            EGC  L  +  S+    KL+ LN+K C+ L  +P  + ++SLE LNL             
Sbjct: 1289 EGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIPSMVDLESLEVLNL------------- 1335

Query: 523  STLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEI 582
                 SG  K   FPEI  +++   EL++ GT I+ +P SI+ L  L  L+L+N R L+ 
Sbjct: 1336 -----SGCSKLGNFPEISPNVK---ELYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKN 1387

Query: 583  LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL 642
            LP ++  LK L +L LSGC  L++FP+  R MK L  L L  T IKE+PSSI  LT L+ 
Sbjct: 1388 LPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCLRFLDLSRTDIKELPSSISYLTALDE 1447

Query: 643  LNLSDCK 649
            L   D +
Sbjct: 1448 LLFVDSR 1454



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 67/140 (47%), Positives = 91/140 (65%), Gaps = 4/140 (2%)

Query: 569  LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIK 628
            LV LNLK C  LE +P  V +L+ L  L LSGCSKL  FPEI  ++K   EL++ GT I+
Sbjct: 1307 LVFLNLKGCSKLENIPSMV-DLESLEVLNLSGCSKLGNFPEISPNVK---ELYMGGTMIQ 1362

Query: 629  EVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
            E+PSSI+ L  LE L+L + ++L  LP+SI  LK L+TLNLSGC  LE  P++  +++ L
Sbjct: 1363 EIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCL 1422

Query: 689  EELDISGTAVPHSTSWYSYI 708
              LD+S T +    S  SY+
Sbjct: 1423 RFLDLSRTDIKELPSSISYL 1442



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 121/297 (40%), Gaps = 83/297 (27%)

Query: 536  FPEIVEHM-EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP-------VTV 587
            FP+ +E++   L  LH E   +  LP S      LV LNL +  + ++          T 
Sbjct: 1196 FPQGLEYLPSKLRLLHWEYYPLSSLPKSFNP-ENLVELNLPSSCAKKLWKGKKARFCTTN 1254

Query: 588  SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
            S+L+ L+ ++LS   +L K P +  +                        T LE ++L  
Sbjct: 1255 SSLEKLKKMRLSYSDQLTKIPRLSSA------------------------TNLEHIDLEG 1290

Query: 648  CKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSY 707
            C +L+ L  SI  LK L  LNL GC KLEN+P                            
Sbjct: 1291 CNSLLSLSQSISYLKKLVFLNLKGCSKLENIP---------------------------- 1322

Query: 708  IPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS 767
                           S+  L SL  LNL+ C+ + G  P    N+   KELY+       
Sbjct: 1323 ---------------SMVDLESLEVLNLSGCSKL-GNFPEISPNV---KELYMGGTMIQE 1363

Query: 768  LPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR---VNGCASLVTLLDALKLCK 821
            +P+SI +L  L  ++LE+ + L++LP     ++ +    ++GC SL    D+ +  K
Sbjct: 1364 IPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMK 1420


>gi|356561383|ref|XP_003548961.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1003

 Score =  356 bits (913), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 242/576 (42%), Positives = 336/576 (58%), Gaps = 61/576 (10%)

Query: 17  SDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS-SKGGLVSLQRQLLSQ 75
           SDV MIGI G+GG+GKTTIAR VY++   +FE   FL ++RE + +K GLV LQ  LLS+
Sbjct: 214 SDVSMIGIYGIGGIGKTTIARAVYNMSFSKFEGICFLPDIREKAINKHGLVELQEMLLSE 273

Query: 76  LLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIIT 135
            LK  D  + +V  GI ++  RLQ+KKVLL++DDV  ++QL+ LAG  +WFGSGS IIIT
Sbjct: 274 TLKEKDIKVGHVNKGIQIIKQRLQQKKVLLILDDVDKLEQLKVLAGQYDWFGSGSIIIIT 333

Query: 136 SRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPL 195
           +RD+HLL TH V ++Y+   LN +++L+LF+  AFK  +     V +S R + YA GLPL
Sbjct: 334 TRDKHLLATHEVVKLYEVKPLNDEKSLELFDWHAFKNNKTDPSYVTISNRAVSYACGLPL 393

Query: 196 ALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKG 255
           ALEV+GS L G+S++E  S L++ E  P  +I +I ++S+DGL+E EK IFLDIACF   
Sbjct: 394 ALEVIGSDLFGKSLNECNSALDKYERIPHEKIHEIFKVSYDGLEENEKGIFLDIACFLNT 453

Query: 256 NDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPEEL 314
               YVT  L   GFHP  G+RVL++K L+ +  +  + MHDL+++ G +IV+++S  E 
Sbjct: 454 FKVSYVTQMLHAHGFHPEDGLRVLVDKSLVKIDASGFVRMHDLIRDTGIEIVRQESTVEP 513

Query: 315 GKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKIC 374
           G+RSRLW +E++ HVL E+TGT+ +E I L+ Y   N + +  + KAF KM NLR+L I 
Sbjct: 514 GRRSRLWFKEDIVHVLEENTGTDKIEFIKLEGY---NNIQVQWNGKAFQKMKNLRILIIE 570

Query: 375 NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKL 434
           N     G E+L N LR L W  YP   LPS+    K +EI                    
Sbjct: 571 NTTFSTGPEHLPNSLRFLDWSCYPSPSLPSDFN-PKRVEI-------------------- 609

Query: 435 KVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLIT 494
                      ++MP             E C ++++ H  L     L I+N K C  L+T
Sbjct: 610 -----------LKMP-------------ESCLKIFQPHKML---ESLSIINFKGC-KLLT 641

Query: 495 LPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT 554
           L  K   K      LK L   I  L  L  LD+   L    FPE++  ME + E+ L+ T
Sbjct: 642 LSAKGCSK------LKILAHCIM-LTSLEILDLGDCLCLEGFPEVLVKMEKIREICLDNT 694

Query: 555 AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
           AI  LP SI  L GL LL+L+ C+ L  LP ++  L
Sbjct: 695 AIGTLPFSIGNLVGLELLSLEQCKRLIQLPGSIFTL 730



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 9/113 (7%)

Query: 564 ELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS---------LKLSGCSKLKKFPEIVRSM 614
           ++L  L ++N K C+ L +     S LK L           L L  C  L+ FPE++  M
Sbjct: 624 KMLESLSIINFKGCKLLTLSAKGCSKLKILAHCIMLTSLEILDLGDCLCLEGFPEVLVKM 683

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL 667
           + + E+ LD T+I  +P SI  L  LELL+L  CK L++LP SI  L  ++ +
Sbjct: 684 EKIREICLDNTAIGTLPFSIGNLVGLELLSLEQCKRLIQLPGSIFTLPKVEVI 736



 Score = 39.7 bits (91), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 727 LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDC 786
           L SL  L+L DC  +EG  P  +  +  ++E+ L   +  +LP SI +L  L  + LE C
Sbjct: 659 LTSLEILDLGDCLCLEG-FPEVLVKMEKIREICLDNTAIGTLPFSIGNLVGLELLSLEQC 717

Query: 787 KRLQSLP 793
           KRL  LP
Sbjct: 718 KRLIQLP 724


>gi|356561221|ref|XP_003548881.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1126

 Score =  356 bits (913), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 261/717 (36%), Positives = 384/717 (53%), Gaps = 55/717 (7%)

Query: 7   KLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           +++ L+D G  DV  M+GI G+ G+GKTT+A  VY+ I   FEAS FL+NVRE S+K GL
Sbjct: 197 EVKELLDVGRDDVVHMVGIHGLPGVGKTTLAVAVYNSIVDHFEASCFLENVRETSNKNGL 256

Query: 66  VSLQRQLLSQL---LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGN 122
           V LQ  LLS+    +KLA     N  +G  ++  +L++KKVLL++DDV + KQLQ++ GN
Sbjct: 257 VHLQSVLLSKTDGEIKLA-----NSREGSTIIQRKLKQKKVLLILDDVDEHKQLQAIIGN 311

Query: 123 REWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQ- 181
            +WFG GSR+IIT+RDEHLL  H V   Y+   LN   ALQL   KAF+  + +      
Sbjct: 312 PDWFGRGSRVIITTRDEHLLALHKVKITYEVRELNKKHALQLLTQKAFELEKEVDPSYHD 371

Query: 182 LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQEL 241
           +  R I YA GLPLALEV+GS L G+S++EW S L+  E  P  +I DIL++S+D L E 
Sbjct: 372 ILNRAITYASGLPLALEVMGSNLFGKSIEEWESALDGYERIPDKKIYDILKVSYDALNED 431

Query: 242 EKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVH---NNTLWMHDL 297
           EK IFLDIAC FK  +  YV + L    G      I VL++K LI +H      + +HDL
Sbjct: 432 EKSIFLDIACGFKDYELTYVQDILYAHYGRCMKYHIGVLVKKSLINIHCWPTKVMRLHDL 491

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           ++++G++IV+R+SP E GKRSRLW  E++  VL E+ GT  +E I ++      EV    
Sbjct: 492 IEDMGKEIVRRESPTEPGKRSRLWSHEDINQVLQENKGTRKIEIICMNFSSFGEEVEW-- 549

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGW-----RGYPLKFLPSNLQMDKTI 412
               F KM NL+ L I +     G ++L N LR+L W     + +P  F P  L + K  
Sbjct: 550 DGDGFKKMENLKTLIIKSDCFSKGPKHLPNTLRVLEWSRCPSQEWPRNFNPKQLAICKLP 609

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
              +   R+  L+K  K L  L  +IL   ++   +PD +   NLE L    C  L+ IH
Sbjct: 610 HSSITSLRLAPLFK--KRLVNLTSLILDECDSFRWIPDVSCLSNLENLSFRKCRNLFTIH 667

Query: 473 PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
            S+ L  KL IL+   C  L + P  + + SLE+                   + SG   
Sbjct: 668 HSVGLLEKLKILDAAGCPKLKSFP-PLKLTSLER------------------FEFSGCYN 708

Query: 533 FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVT-VSNLK 591
            + FPEI+  ME++++L   G AI  LP S   L+ L LL L      +    T +SN+ 
Sbjct: 709 LKSFPEILGKMENMTQLSWTGCAITKLPPSFRNLTRLQLLVLTTFIKYDFDAATLISNIC 768

Query: 592 CLRSLKLSGCSKL--KKFPEIVRSM-----KDLSELFLDGTSIKEVPSSIELLTKLELLN 644
            +  L     + L  +  P+ V  +       +  L L+  S + +P  +     ++ LN
Sbjct: 769 MMPELNQIDAAGLQWRLLPDDVLKLTSVVCSSVQSLTLE-LSDELLPLFLSCFVNVKKLN 827

Query: 645 LSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE---NVPETLGQIESLEELDISGTAV 698
           LS  K  V +P  I   + L TL L  C++L+    +P  L  + +++   ++ +++
Sbjct: 828 LSWSKFTV-IPECIKECRFLTTLTLDYCYRLQEIRGIPPNLKILSAMDSPALNSSSI 883



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 113/484 (23%), Positives = 191/484 (39%), Gaps = 115/484 (23%)

Query: 579  SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI--VRSMKDLSELFLDGTSIKEVPSSIEL 636
            SL + P+    L  L SL L  C   +  P++  + ++++LS  F    ++  +  S+ L
Sbjct: 615  SLRLAPLFKKRLVNLTSLILDECDSFRWIPDVSCLSNLENLS--FRKCRNLFTIHHSVGL 672

Query: 637  LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
            L KL++L+ + C  L   P   + L SL+    SGC+ L++ PE LG++E++ +L  +G 
Sbjct: 673  LEKLKILDAAGCPKLKSFPP--LKLTSLERFEFSGCYNLKSFPEILGKMENMTQLSWTGC 730

Query: 697  AVPH-STSWYSYIPINLMRKSVALKLPS-----LSGLCSLRKLNLTD-CNLMEGALPSDI 749
            A+     S+ +   + L+  +  +K        +S +C + +LN  D   L    LP D+
Sbjct: 731  AITKLPPSFRNLTRLQLLVLTTFIKYDFDAATLISNICMMPELNQIDAAGLQWRLLPDDV 790

Query: 750  GNLCS---------------------------LKELYLSKNSFVSLPTSITHLSKLLNIE 782
              L S                           +K+L LS + F  +P  I     L  + 
Sbjct: 791  LKLTSVVCSSVQSLTLELSDELLPLFLSCFVNVKKLNLSWSKFTVIPECIKECRFLTTLT 850

Query: 783  LEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLA 842
            L+ C RLQ +  +PPN++                         +++ +DS  L  N S  
Sbjct: 851  LDYCYRLQEIRGIPPNLK-------------------------ILSAMDSPAL--NSSSI 883

Query: 843  FSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
              +L + L    +T       +P  +IPEWF   + G  I        + + K     +C
Sbjct: 884  SMLLNQELHEAGDT----DFSLPRVQIPEWFECHSWGPPIC------FWFRNKFPAITVC 933

Query: 903  CVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYD 962
             V   L     +    + P +  N    HGI    +R  F              R + Y 
Sbjct: 934  IVKLNLSYQLLSVIINNKPEYVYN---KHGIIDF-YRGTF--------------RHSTYV 975

Query: 963  IRLPLESNLE----PFESNHVNV--SFEPWLGQGLEVKMCGLHPVYMDEVEELDQTTNQP 1016
             RL +E NL+      E NH  +    E W         CG+H +        +Q++ + 
Sbjct: 976  FRLQMEDNLDEELSKSEWNHAQIVCGEESW-------DECGIHVLK-------EQSSMED 1021

Query: 1017 SRFT 1020
             RFT
Sbjct: 1022 IRFT 1025


>gi|238480299|ref|NP_001154222.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
 gi|332657686|gb|AEE83086.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
          Length = 1879

 Score =  356 bits (913), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 244/667 (36%), Positives = 366/667 (54%), Gaps = 49/667 (7%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MD + E++  L+   S DVR IGI G  G+GKTTIA  ++  IS ++E    L ++ +  
Sbjct: 819  MDMQVEEILSLLCIESLDVRSIGIWGTVGIGKTTIAEEIFRKISVQYETCVVLKDLHKEV 878

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
               G  +++   LS++L++  + I         L SRLQRK++L+++DDV D + + +  
Sbjct: 879  EVKGHDAVRENFLSEVLEVEPHVIRISDIKTSFLRSRLQRKRILVILDDVNDYRDVDTFL 938

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            G   +FG GSRII+TSR+  +     +D VY+   L+  ++L L +    +     +   
Sbjct: 939  GTLNYFGPGSRIIMTSRNRRVFVLCKIDHVYEVKPLDIPKSLLLLDRGTCQIVLSPEVYK 998

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVD-EWRSTLERLEIEPPSEILDILQISFDGLQ 239
             LS  +++++ G P  L+    FLS  S+D EW    + ++   P  I  I + S  GL 
Sbjct: 999  TLSLELVKFSNGNPQVLQ----FLS--SIDREWNKLSQEVKTTSPIYIPGIFEKSCCGLD 1052

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLL 298
            + E+ IFLDIACFF   D+D V   L+GCGF   +G R L++K L+T+  +N + M   +
Sbjct: 1053 DNERGIFLDIACFFNRIDKDNVAMLLDGCGFSAHVGFRGLVDKSLLTISQHNLVDMLSFI 1112

Query: 299  QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
            Q  G++IV+++S +  G RSRLW  + + HV    TGT  +EGI LD  +    +   A+
Sbjct: 1113 QATGREIVRQESADRPGDRSRLWNADYIRHVFINDTGTSAIEGIFLDMLN----LKFDAN 1168

Query: 359  AKAFSKMTNLRLLKI-CN-------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK 410
               F KM NLRLLK+ C+       +  P GLEYL ++LRLL W  YPL  LP +   + 
Sbjct: 1169 PNVFEKMCNLRLLKLYCSKAEEKHGVSFPQGLEYLPSKLRLLHWEYYPLSSLPKSFNPEN 1228

Query: 411  TIEIYMCYSRIGELWKGIK--------HLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
             +E+ +  S   +LWKG K         L+KLK M LS+S+ L ++P  + A NLE + L
Sbjct: 1229 LVELNLPSSCAKKLWKGKKARFCTTNSSLEKLKKMRLSYSDQLTKIPRLSSATNLEHIDL 1288

Query: 463  EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCL 522
            EGC  L  +  S+    KL+ LN+K C+ L  +P  + ++SLE LNL             
Sbjct: 1289 EGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIPSMVDLESLEVLNL------------- 1335

Query: 523  STLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEI 582
                 SG  K   FPEI  +++   EL++ GT I+ +P SI+ L  L  L+L+N R L+ 
Sbjct: 1336 -----SGCSKLGNFPEISPNVK---ELYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKN 1387

Query: 583  LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL 642
            LP ++  LK L +L LSGC  L++FP+  R MK L  L L  T IKE+PSSI  LT L+ 
Sbjct: 1388 LPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCLRFLDLSRTDIKELPSSISYLTALDE 1447

Query: 643  LNLSDCK 649
            L   D +
Sbjct: 1448 LLFVDSR 1454



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 67/140 (47%), Positives = 91/140 (65%), Gaps = 4/140 (2%)

Query: 569  LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIK 628
            LV LNLK C  LE +P  V +L+ L  L LSGCSKL  FPEI  ++K   EL++ GT I+
Sbjct: 1307 LVFLNLKGCSKLENIPSMV-DLESLEVLNLSGCSKLGNFPEISPNVK---ELYMGGTMIQ 1362

Query: 629  EVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
            E+PSSI+ L  LE L+L + ++L  LP+SI  LK L+TLNLSGC  LE  P++  +++ L
Sbjct: 1363 EIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCL 1422

Query: 689  EELDISGTAVPHSTSWYSYI 708
              LD+S T +    S  SY+
Sbjct: 1423 RFLDLSRTDIKELPSSISYL 1442



 Score = 48.5 bits (114), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 121/297 (40%), Gaps = 83/297 (27%)

Query: 536  FPEIVEHM-EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEI-------LPVTV 587
            FP+ +E++   L  LH E   +  LP S      LV LNL +  + ++          T 
Sbjct: 1196 FPQGLEYLPSKLRLLHWEYYPLSSLPKSFNP-ENLVELNLPSSCAKKLWKGKKARFCTTN 1254

Query: 588  SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
            S+L+ L+ ++LS   +L K P +  +                        T LE ++L  
Sbjct: 1255 SSLEKLKKMRLSYSDQLTKIPRLSSA------------------------TNLEHIDLEG 1290

Query: 648  CKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSY 707
            C +L+ L  SI  LK L  LNL GC KLEN+P                            
Sbjct: 1291 CNSLLSLSQSISYLKKLVFLNLKGCSKLENIP---------------------------- 1322

Query: 708  IPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS 767
                           S+  L SL  LNL+ C+ + G  P    N+   KELY+       
Sbjct: 1323 ---------------SMVDLESLEVLNLSGCSKL-GNFPEISPNV---KELYMGGTMIQE 1363

Query: 768  LPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR---VNGCASLVTLLDALKLCK 821
            +P+SI +L  L  ++LE+ + L++LP     ++ +    ++GC SL    D+ +  K
Sbjct: 1364 IPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMK 1420


>gi|186511687|ref|NP_001118968.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
 gi|29839687|sp|Q9SZ67.1|WRK19_ARATH RecName: Full=Probable WRKY transcription factor 19; AltName:
            Full=WRKY DNA-binding protein 19
 gi|4586107|emb|CAB40943.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|7267903|emb|CAB78245.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|332657685|gb|AEE83085.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
          Length = 1895

 Score =  355 bits (912), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 244/667 (36%), Positives = 366/667 (54%), Gaps = 49/667 (7%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MD + E++  L+   S DVR IGI G  G+GKTTIA  ++  IS ++E    L ++ +  
Sbjct: 819  MDMQVEEILSLLCIESLDVRSIGIWGTVGIGKTTIAEEIFRKISVQYETCVVLKDLHKEV 878

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
               G  +++   LS++L++  + I         L SRLQRK++L+++DDV D + + +  
Sbjct: 879  EVKGHDAVRENFLSEVLEVEPHVIRISDIKTSFLRSRLQRKRILVILDDVNDYRDVDTFL 938

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            G   +FG GSRII+TSR+  +     +D VY+   L+  ++L L +    +     +   
Sbjct: 939  GTLNYFGPGSRIIMTSRNRRVFVLCKIDHVYEVKPLDIPKSLLLLDRGTCQIVLSPEVYK 998

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVD-EWRSTLERLEIEPPSEILDILQISFDGLQ 239
             LS  +++++ G P  L+    FLS  S+D EW    + ++   P  I  I + S  GL 
Sbjct: 999  TLSLELVKFSNGNPQVLQ----FLS--SIDREWNKLSQEVKTTSPIYIPGIFEKSCCGLD 1052

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLL 298
            + E+ IFLDIACFF   D+D V   L+GCGF   +G R L++K L+T+  +N + M   +
Sbjct: 1053 DNERGIFLDIACFFNRIDKDNVAMLLDGCGFSAHVGFRGLVDKSLLTISQHNLVDMLSFI 1112

Query: 299  QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
            Q  G++IV+++S +  G RSRLW  + + HV    TGT  +EGI LD  +    +   A+
Sbjct: 1113 QATGREIVRQESADRPGDRSRLWNADYIRHVFINDTGTSAIEGIFLDMLN----LKFDAN 1168

Query: 359  AKAFSKMTNLRLLKI-CN-------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK 410
               F KM NLRLLK+ C+       +  P GLEYL ++LRLL W  YPL  LP +   + 
Sbjct: 1169 PNVFEKMCNLRLLKLYCSKAEEKHGVSFPQGLEYLPSKLRLLHWEYYPLSSLPKSFNPEN 1228

Query: 411  TIEIYMCYSRIGELWKGIK--------HLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
             +E+ +  S   +LWKG K         L+KLK M LS+S+ L ++P  + A NLE + L
Sbjct: 1229 LVELNLPSSCAKKLWKGKKARFCTTNSSLEKLKKMRLSYSDQLTKIPRLSSATNLEHIDL 1288

Query: 463  EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCL 522
            EGC  L  +  S+    KL+ LN+K C+ L  +P  + ++SLE LNL             
Sbjct: 1289 EGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIPSMVDLESLEVLNL------------- 1335

Query: 523  STLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEI 582
                 SG  K   FPEI  +++   EL++ GT I+ +P SI+ L  L  L+L+N R L+ 
Sbjct: 1336 -----SGCSKLGNFPEISPNVK---ELYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKN 1387

Query: 583  LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL 642
            LP ++  LK L +L LSGC  L++FP+  R MK L  L L  T IKE+PSSI  LT L+ 
Sbjct: 1388 LPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCLRFLDLSRTDIKELPSSISYLTALDE 1447

Query: 643  LNLSDCK 649
            L   D +
Sbjct: 1448 LLFVDSR 1454



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 67/140 (47%), Positives = 91/140 (65%), Gaps = 4/140 (2%)

Query: 569  LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIK 628
            LV LNLK C  LE +P  V +L+ L  L LSGCSKL  FPEI  ++K   EL++ GT I+
Sbjct: 1307 LVFLNLKGCSKLENIPSMV-DLESLEVLNLSGCSKLGNFPEISPNVK---ELYMGGTMIQ 1362

Query: 629  EVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
            E+PSSI+ L  LE L+L + ++L  LP+SI  LK L+TLNLSGC  LE  P++  +++ L
Sbjct: 1363 EIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCL 1422

Query: 689  EELDISGTAVPHSTSWYSYI 708
              LD+S T +    S  SY+
Sbjct: 1423 RFLDLSRTDIKELPSSISYL 1442



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 121/297 (40%), Gaps = 83/297 (27%)

Query: 536  FPEIVEHM-EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP-------VTV 587
            FP+ +E++   L  LH E   +  LP S      LV LNL +  + ++          T 
Sbjct: 1196 FPQGLEYLPSKLRLLHWEYYPLSSLPKSFNP-ENLVELNLPSSCAKKLWKGKKARFCTTN 1254

Query: 588  SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
            S+L+ L+ ++LS   +L K P +  +                        T LE ++L  
Sbjct: 1255 SSLEKLKKMRLSYSDQLTKIPRLSSA------------------------TNLEHIDLEG 1290

Query: 648  CKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSY 707
            C +L+ L  SI  LK L  LNL GC KLEN+P                            
Sbjct: 1291 CNSLLSLSQSISYLKKLVFLNLKGCSKLENIP---------------------------- 1322

Query: 708  IPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS 767
                           S+  L SL  LNL+ C+ + G  P    N+   KELY+       
Sbjct: 1323 ---------------SMVDLESLEVLNLSGCSKL-GNFPEISPNV---KELYMGGTMIQE 1363

Query: 768  LPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR---VNGCASLVTLLDALKLCK 821
            +P+SI +L  L  ++LE+ + L++LP     ++ +    ++GC SL    D+ +  K
Sbjct: 1364 IPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMK 1420


>gi|227438193|gb|ACP30586.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1001

 Score =  355 bits (912), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 258/730 (35%), Positives = 387/730 (53%), Gaps = 77/730 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++    ++  L+D  S +VRMIGI G  G+GKTTIAR ++  +S  F+ S F+D  R+  
Sbjct: 184 IEDHIAEMSLLLDMESEEVRMIGIWGPSGIGKTTIARALFGRLSRRFQCSVFID--RKFI 241

Query: 61  SK-------------GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVI 107
           SK                +SLQR  LS++L      I    D +  + +RL+ +KVL+ I
Sbjct: 242 SKIMEGYRGANPDDYNMKLSLQRHFLSEILGTRHIQI----DHLGAVENRLKNQKVLISI 297

Query: 108 DDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNM 167
           DD+ D   L  LAG   WFGSGSRII+ ++D H L+ H +D +Y+    + + AL++   
Sbjct: 298 DDLDDQVVLDVLAGQAHWFGSGSRIIVVTKDRHFLRAHEIDHIYEVCLPSEERALEILCR 357

Query: 168 KAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEI 227
             FK   P +   +L+  + R+AG LPL L VLGS L GR    W   L  L+     +I
Sbjct: 358 SDFKQNSPREGFEKLAVEVTRHAGSLPLGLTVLGSTLRGRDNAYWMDILPTLQNGVGEKI 417

Query: 228 LDILQISFDGL-QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLIT 286
             IL+IS+DGL +E +K I+  IAC F G    Y+   LE       +GI  L++K LI 
Sbjct: 418 EKILRISYDGLDREEDKVIYRHIACLFNGEKVPYIKLLLEDRNLGVNVGIENLVDKSLIH 477

Query: 287 VHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDN 346
           V ++T+ MH LLQE+G++IV+ QS +E G R  L   +++C VL+E++GT+ V G+ LD 
Sbjct: 478 VRSDTVEMHSLLQEIGRKIVRAQSIDEPGNREFLVDLDDICDVLSENSGTKKVLGVALDM 537

Query: 347 YHHENEVYLCASAKAFSKMTNLRLLKI------CNLQLPNGLEYLSNRLRLLGWRGYPLK 400
               +E+++     AF  M+NLR LK         L+L    +YL ++LRLL W  YP++
Sbjct: 538 DKIHDELHV--HENAFKGMSNLRFLKFYTFGKEARLRLNESFDYLPSKLRLLCWDKYPMR 595

Query: 401 FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
            LPS       + + M  S +  LW+G+  L  LK M L  S+NL  +PD + A +LEKL
Sbjct: 596 CLPSKFCPQNLVILEMKNSNLENLWEGVSPLGHLKKMDLWGSKNLKEIPDLSKATSLEKL 655

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKS------LPT 514
            L+GC+ L E+  S+   NKL  LNM  CT+L TLP  + ++SL +LNLK        P 
Sbjct: 656 DLKGCSSLVELPSSISKLNKLTELNMPACTNLETLPTGMNLESLNRLNLKGCTRLRIFPN 715

Query: 515 TISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT-------------------- 554
               +  L    +  +    EFP  + ++E+L+   +EG                     
Sbjct: 716 ISRNISEL----ILDETSITEFPSNL-YLENLNLFSMEGIKSEKLWERAQPLTPLMTMLS 770

Query: 555 ------------AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
                       ++  LP S   L  L  L++  C++LEILP  + NL  L  L LSGCS
Sbjct: 771 PSLRILSLSDIPSLVELPSSFHNLHNLTNLSITRCKNLEILPTRI-NLPSLIRLILSGCS 829

Query: 603 KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
           +L+ FP+I R++ DL+   L  T I+E+P  +E  ++L+ L +  C  L  +  SI  L+
Sbjct: 830 RLRSFPDISRNVLDLN---LIQTGIEEIPLWVEDFSRLKYLFMESCPKLKYV--SISTLR 884

Query: 663 SLKTLNLSGC 672
            L+ ++ S C
Sbjct: 885 HLEMVDFSNC 894



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 127/244 (52%), Gaps = 19/244 (7%)

Query: 568 GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TS 626
            LV+L +KN  +LE L   VS L  L+ + L G   LK+ P++ ++   L +L L G +S
Sbjct: 605 NLVILEMKNS-NLENLWEGVSPLGHLKKMDLWGSKNLKEIPDLSKATS-LEKLDLKGCSS 662

Query: 627 IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIE 686
           + E+PSSI  L KL  LN+  C NL  LP+ +  L+SL  LNL GC +L   P     I 
Sbjct: 663 LVELPSSISKLNKLTELNMPACTNLETLPTGM-NLESLNRLNLKGCTRLRIFPNISRNIS 721

Query: 687 SLEELDISGTAVPHSTSWYSYIPINLMRKSVALKL--------PSLSGLC-SLRKLNLTD 737
            L   + S T  P S  +   + +  M    + KL        P ++ L  SLR L+L+D
Sbjct: 722 ELILDETSITEFP-SNLYLENLNLFSMEGIKSEKLWERAQPLTPLMTMLSPSLRILSLSD 780

Query: 738 C-NLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQL 795
             +L+E  LPS   NL +L  L +++  +   LPT I +L  L+ + L  C RL+S P +
Sbjct: 781 IPSLVE--LPSSFHNLHNLTNLSITRCKNLEILPTRI-NLPSLIRLILSGCSRLRSFPDI 837

Query: 796 PPNI 799
             N+
Sbjct: 838 SRNV 841


>gi|51555866|dbj|BAD38678.1| disease resistance protein SLH1 [Arabidopsis thaliana]
 gi|306448589|gb|ADM88042.1| RRS1-R [Arabidopsis thaliana]
          Length = 1378

 Score =  355 bits (911), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 260/711 (36%), Positives = 390/711 (54%), Gaps = 69/711 (9%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
           +R +GI GM G+GKTT+A+ V+D +S  F+AS F+++  +   + GL  L   L  QLL 
Sbjct: 172 IRCVGIWGMPGIGKTTLAKAVFDQMSSAFDASCFIEDYDKSIHEKGLYCL---LEEQLLP 228

Query: 79  LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
             D +I      +  L  RL  K+VL+V+DDV +    +S     +W G GS IIITSRD
Sbjct: 229 GNDATIMK----LSSLRDRLNSKRVLVVLDDVCNALVAESFLEGFDWLGPGSLIIITSRD 284

Query: 139 EHLLKTHGVDEVYKPHGLNYDEALQLFNMKA-FKTYQPLQECVQLSARIIRYAGGLPLAL 197
           + + +  G++++Y+  GLN  EA QLF + A        Q   +LS R+I YA G PLA+
Sbjct: 285 KQVFRLCGINQIYEVQGLNEKEARQLFLLSASIMEDMGEQNLHELSVRVISYANGNPLAI 344

Query: 198 EVLGSFLSGRS-VDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGN 256
            V G  L G+  + E  +   +L+  PP +I+D  + S+D L + EK IFLDIACFF+G 
Sbjct: 345 SVYGRELKGKKKLSEMETAFLKLKRRPPFKIVDAFKSSYDTLSDNEKNIFLDIACFFQGE 404

Query: 257 DRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGK 316
           + +YV   LEGCGF P + I VL++KCL+T+  N +W+H L Q++G++I+  ++  ++ +
Sbjct: 405 NVNYVIQLLEGCGFFPHVEIDVLVDKCLVTISENRVWLHKLTQDIGREIINGETV-QIER 463

Query: 317 RSRLWKEEEVCHVL---------------TESTGTELVEGIVLDNYHHENEVYLCASAKA 361
           R RLW+   + ++L                 + G+E +EG+ LD     + +       A
Sbjct: 464 RRRLWEPWSIKYLLEYNEHKANGEPKTTFKRAQGSEEIEGLFLDT----SNLRFDLQPSA 519

Query: 362 FSKMTNLRLLKI-CN-------LQLPNG-LEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
           F  M NLRLLKI C+       +  P G L  L N LRLL W  YPLK LP N      +
Sbjct: 520 FKNMLNLRLLKIYCSNPEVHPVINFPTGSLHSLPNELRLLHWENYPLKSLPQNFDPRHLV 579

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
           EI M YS++ +LW G K+L+ L+ + L HS++L+ + D   A NLE + L+GCTRL    
Sbjct: 580 EINMPYSQLQKLWGGTKNLEMLRTIRLCHSQHLVDIDDLLKAENLEVIDLQGCTRLQNF- 638

Query: 473 PSLLLHNKLIILNMKDC---TSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG 529
           P+     +L ++N+  C    S++ +P  I     EKL+L+      +G+  L    V  
Sbjct: 639 PAAGRLLRLRVVNLSGCIKIKSVLEIPPNI-----EKLHLQG-----TGILALPVSTVKP 688

Query: 530 DLKFREFPEIVEHMEHLSEL-HLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
           +   RE    +  +  LSE   LE  T++     S + L  L+ L LK+C  L+ LP  +
Sbjct: 689 N--HRELVNFLTEIPGLSEASKLERLTSLLESNSSCQDLGKLICLELKDCSCLQSLP-NM 745

Query: 588 SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
           +NL  L  L LSGCS L       R +K   +L+L GT+I+EVP   +L   LE+LN + 
Sbjct: 746 ANLD-LNVLDLSGCSSLNSIQGFPRFLK---QLYLGGTAIREVP---QLPQSLEILN-AH 797

Query: 648 CKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
              L  LP ++  L+ LK L+LSGC +LE +    G   +L+EL  +GT +
Sbjct: 798 GSCLRSLP-NMANLEFLKVLDLSGCSELETIQ---GFPRNLKELYFAGTTL 844



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 52/83 (62%), Gaps = 1/83 (1%)

Query: 229  DILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH 288
            ++L++S+D LQE++K +FL IA  F   D D+V   + G       G++VL +  LI+V 
Sbjct: 1087 EVLRVSYDDLQEMDKVLFLYIASLFNDEDVDFVAPLIAGIDLDVSSGLKVLADVSLISVS 1146

Query: 289  NN-TLWMHDLLQELGQQIVQRQS 310
            +N  + MH L +++G++I+  QS
Sbjct: 1147 SNGEIVMHSLQRQMGKEILHGQS 1169



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 111/266 (41%), Gaps = 61/266 (22%)

Query: 549 LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
           LH E   ++ LP + +    LV +N+   + L+ L     NL+ LR+++L     L    
Sbjct: 559 LHWENYPLKSLPQNFDP-RHLVEINMPYSQ-LQKLWGGTKNLEMLRTIRLCHSQHLVDID 616

Query: 609 EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
           +++++                          LE+++L  C  L   P++   L+ L+ +N
Sbjct: 617 DLLKA------------------------ENLEVIDLQGCTRLQNFPAAGRLLR-LRVVN 651

Query: 669 LSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLC 728
           LSGC K+++V E    IE L        A+P ST      P +    +   ++P LS   
Sbjct: 652 LSGCIKIKSVLEIPPNIEKLHLQGTGILALPVST----VKPNHRELVNFLTEIPGLSEAS 707

Query: 729 SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKR 788
            L +L                              S +   +S   L KL+ +EL+DC  
Sbjct: 708 KLERL-----------------------------TSLLESNSSCQDLGKLICLELKDCSC 738

Query: 789 LQSLPQLPP-NIRQVRVNGCASLVTL 813
           LQSLP +   ++  + ++GC+SL ++
Sbjct: 739 LQSLPNMANLDLNVLDLSGCSSLNSI 764


>gi|30684793|ref|NP_849410.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658793|gb|AEE84193.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1049

 Score =  355 bits (911), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 246/702 (35%), Positives = 389/702 (55%), Gaps = 67/702 (9%)

Query: 1   MDSRCEKL-RFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR ++L + LM      VR++G+ GM G+GKTT+A +VY      F+   FL+++ + 
Sbjct: 195 IESRSKELEKLLMFDNDECVRVVGVLGMTGIGKTTVADIVYKQNFQRFDGYEFLEDIEDN 254

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDG--IDMLG-----SRLQRKKVLLVIDDVVD 112
           S + GL  L ++LL +LL           DG  +D+       + L+ KK+ +V+D+V +
Sbjct: 255 SKRYGLPYLYQKLLHKLL-----------DGENVDVRAQGRPENFLRNKKLFIVLDNVTE 303

Query: 113 VKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKT 172
            KQ++ L G +  +  GSRI+I +RD+ LL+ +  D  Y    LN  EA++LF ++ F  
Sbjct: 304 EKQIEYLIGKKNVYRQGSRIVIITRDKKLLQKNA-DATYVVPRLNDREAMELFCLQVFGN 362

Query: 173 YQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQ 232
           + P +E V LS   + YA GLPLAL++LG  L    ++ W+  LE L++ P  E+   L+
Sbjct: 363 HYPTEEFVDLSNDFVCYAKGLPLALKLLGKGLLTHDINYWKKKLEFLQVNPDKELQKELK 422

Query: 233 ISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTL 292
            S+  L + +K +FLDIACFF+    D+V++ L+         +R L EKCL+T+  + +
Sbjct: 423 SSYKALDDDQKSVFLDIACFFRSEKADFVSSILKSDDIDAKDVMRELEEKCLVTISYDRI 482

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            MHDLL  +G++I + +S  + G+R RLW  +++  +L  +TGTE V GI L N      
Sbjct: 483 EMHDLLHAMGKEIGKEKSIRKAGERRRLWNHKDIRDILEHNTGTECVRGIFL-NMSEVRR 541

Query: 353 VYLCASAKAFSKMTNLRLLKI--------CN----LQLPNGLEYLSNRLRLLGWRGYPLK 400
           + L  +  AF+ ++ L+ LK         C+     Q     ++  + L  L W+GYP  
Sbjct: 542 IKLFPA--AFTMLSKLKFLKFHSSHCSQWCDNDHIFQCSKVPDHFPDELVYLHWQGYPYD 599

Query: 401 FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
            LPS+    + +++ + YS I +LW+  K+ + L+ + L  S++L+ +   + A NLE+L
Sbjct: 600 CLPSDFDPKELVDLSLRYSHIKQLWEDEKNTESLRWVDLGQSKDLLNLSGLSRAKNLERL 659

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLK 520
            LEGCT L ++  S+   N+LI LN++DCTSL +LP    +KSL+               
Sbjct: 660 DLEGCTSL-DLLGSVKQMNELIYLNLRDCTSLESLPKGFKIKSLK--------------- 703

Query: 521 CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL 580
              TL +SG LK ++F  I E +E    LHLEGTAI  +   IE L  L+LLNLKNC  L
Sbjct: 704 ---TLILSGCLKLKDFHIISESIE---SLHLEGTAIERVVEHIESLHSLILLNLKNCEKL 757

Query: 581 EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
           + LP  +  LK L+ L LSGCS L+  P I   M+ L  L +DGTSIK+ P  +  L+ L
Sbjct: 758 KYLPNDLYKLKSLQELVLSGCSALESLPPIKEKMECLEILLMDGTSIKQTP-EMSCLSNL 816

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
           ++ +   C+ ++   + +        L+  GC  LENV + L
Sbjct: 817 KICSF--CRPVIDDSTGLY-------LDAHGCGSLENVSKPL 849



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 154/341 (45%), Gaps = 67/341 (19%)

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           ++L  L LEG     L  S++ ++ L+ LNL++C SLE LP     +K L++L LSGC K
Sbjct: 654 KNLERLDLEGCTSLDLLGSVKQMNELIYLNLRDCTSLESLPKGF-KIKSLKTLILSGCLK 712

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
           LK F  I  S++ L    L+GT+I+ V   IE L  L LLNL +C+ L  LP+ +  LKS
Sbjct: 713 LKDFHIISESIESLH---LEGTAIERVVEHIESLHSLILLNLKNCEKLKYLPNDLYKLKS 769

Query: 664 LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPS 723
           L+ L LSGC  LE++P    ++E LE L + GT++  +                    P 
Sbjct: 770 LQELVLSGCSALESLPPIKEKMECLEILLMDGTSIKQT--------------------PE 809

Query: 724 LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIEL 783
           +S L      NL  C+     +    G       LYL  +   SL     ++SK L I L
Sbjct: 810 MSCLS-----NLKICSFCRPVIDDSTG-------LYLDAHGCGSL----ENVSKPLTIPL 853

Query: 784 EDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLK--LLGNKSL 841
              +R+                   +     D  KL +++   I     LK  LL   S 
Sbjct: 854 V-TERMH------------------TTFIFTDCFKLNQAEKEDIVAQAQLKSQLLARTSR 894

Query: 842 AFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSI 882
             +     L+ +      ++V  PG +IP WF +Q  GS I
Sbjct: 895 HHNHKGLLLDPL------VAVCFPGHDIPSWFSHQKMGSLI 929


>gi|356554611|ref|XP_003545638.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1114

 Score =  355 bits (910), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 223/551 (40%), Positives = 329/551 (59%), Gaps = 40/551 (7%)

Query: 2   DSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS 61
           D     +  L+   S +VR+IGI GMGG+GKTTIA V++  IS  +E S FL NV E S 
Sbjct: 264 DENYASIESLLKIDSEEVRVIGIWGMGGIGKTTIAEVIFHKISSRYEGSSFLKNVAEESK 323

Query: 62  KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAG 121
           + GL  + ++LLS+LL+  D  I        ++  RL+RKKVL+V+DDV   + L++L G
Sbjct: 324 RHGLNYICKELLSKLLR-EDLHIDTPKVIPSIITRRLKRKKVLIVLDDVNTSELLENLVG 382

Query: 122 -NREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
             R+W G+GSR+I+T+RD+H++    VD++++   +N+  +L+LF++ AF    P +   
Sbjct: 383 VGRDWLGAGSRVIVTTRDKHVIMGEVVDKIHEVKKMNFQNSLELFSLNAFGKTYPQKGYE 442

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS R + YA G+PLAL+VLGS L  RS +EW S L +L+  P  EI  + ++S++GL +
Sbjct: 443 ELSKRAMGYAKGIPLALKVLGSLLRSRSENEWDSALSKLKKIPNPEIQAVFRLSYEGLDD 502

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV--HNNTLWMHDLL 298
            EK IFLDI CFFKG  RD VT  L  C F   IGIR L++K LIT+   +N + MHDL+
Sbjct: 503 DEKNIFLDITCFFKGQRRDRVTKILNDCNFSADIGIRSLLDKALITITSDSNCIDMHDLI 562

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           +E+G+++V+ +S +  G+RSRLW  EEV  +LT + GT+ VEGI LD        Y+  S
Sbjct: 563 REMGREVVREESMKNPGQRSRLWDPEEVIDILTNNGGTDTVEGIWLDMTQIS---YINLS 619

Query: 359 AKAFSKMTNLRLL----------KICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQM 408
           +KAF KM N+RLL          +I ++ LP GLE+L   LR LGW GYPL+ LPS+   
Sbjct: 620 SKAFRKMPNMRLLAFQSPKGEFERINSVYLPKGLEFLPKNLRYLGWNGYPLESLPSSFCP 679

Query: 409 DKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
           +K +E+ M YS + +LW G+++L  L+ + L  S++L+  P  + APNL+ + + GC  L
Sbjct: 680 EKLVELSMPYSNLEKLWHGVQNLPNLERIDLHGSKHLMECPKLSHAPNLKYVSMRGCESL 739

Query: 469 YEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVS 528
             +                   S+ +LP       LE LN+  LP +I  L  L  L+V 
Sbjct: 740 PYVD-----------------ESICSLP------KLEILNVSGLPESIKDLPKLKVLEVG 776

Query: 529 GDLKFREFPEI 539
              K +  P +
Sbjct: 777 ECKKLQHIPAL 787



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 87/172 (50%), Gaps = 13/172 (7%)

Query: 650 NLVRLPSSIIAL-KSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI 708
           N V LP  +  L K+L+ L  +G + LE++P +    E L EL +  + +         +
Sbjct: 645 NSVYLPKGLEFLPKNLRYLGWNG-YPLESLPSSFCP-EKLVELSMPYSNLEKLWHGVQNL 702

Query: 709 P----INLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNS 764
           P    I+L      ++ P LS   +L+ +++  C     +LP    ++CSL +L +   S
Sbjct: 703 PNLERIDLHGSKHLMECPKLSHAPNLKYVSMRGCE----SLPYVDESICSLPKLEILNVS 758

Query: 765 FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDA 816
              LP SI  L KL  +E+ +CK+LQ +P LP +++   V  C SL T+L +
Sbjct: 759 --GLPESIKDLPKLKVLEVGECKKLQHIPALPRSLQFFLVWNCQSLQTVLSS 808


>gi|224127230|ref|XP_002329432.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870482|gb|EEF07613.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1136

 Score =  355 bits (910), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 280/784 (35%), Positives = 416/784 (53%), Gaps = 93/784 (11%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D    K+  L++  S DV ++GI GMGG+GKTTIA  V + +  +FE   F  N R+ S
Sbjct: 225 IDVHVSKVESLLNIESPDVLIVGIWGMGGIGKTTIAEAVCNKVHSQFERI-FFANCRQQS 283

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGS----RLQRKKVLLVIDDVVDVKQL 116
                  L R+ L +LL        N    +  L S    RL+R KV +V+DDV D+ +L
Sbjct: 284 D------LPRRFLKRLL---GQETLNTMGSLSFLDSFVRDRLRRIKVFIVLDDVDDLMRL 334

Query: 117 QS----LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKT 172
                 L G    FGSGS+++ITSR++ LLK + VDE Y+  GLNY +A+QLF+ KA K 
Sbjct: 335 DEWRDLLDGRNNSFGSGSKVLITSRNKQLLK-NVVDETYEVEGLNYADAIQLFSSKALKN 393

Query: 173 YQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQ 232
             P  +   L  + +R+  G PLAL+VLGS L  +S++EWRS L++L ++P  +I   L+
Sbjct: 394 CIPTIDQRHLIIKNVRHVQGNPLALKVLGSSLYDKSIEEWRSALKKLALDP--QIERALR 451

Query: 233 ISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPV-IGIRVLIEKCLITV---- 287
           IS+DGL   +K IFLDIA FFKG  +   T  L+      V   I  LI+KCLI+     
Sbjct: 452 ISYDGLDLEQKPIFLDIAHFFKGRMQGEATGILDCLYGQSVNFDISTLIDKCLISTAKDY 511

Query: 288 -HNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDN 346
            H + L MHDLLQE+   IV+ +S +  G+RSRL    +V  +L E+ GT+ ++GI LD 
Sbjct: 512 FHRDKLEMHDLLQEMAFNIVRAES-DFPGERSRLSHPPDVVQLLEENKGTQQIKGISLDM 570

Query: 347 YHHENEVYLCASAKAFSKMTNLRLL-----------KICNLQLPNGLEYLSNRLRLLGWR 395
                +++L   + AF+ M  LR L           KI +L  P GLEYL N LR   W 
Sbjct: 571 SMLSRQIHL--KSDAFAMMDGLRFLNIYFSRYSKEDKILHLP-PTGLEYLPNELRYFLWS 627

Query: 396 GYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAP 455
            +PLK LP + + +  +E+++  S++ +LW G+K +  L+ + LS S  L  +PD + A 
Sbjct: 628 RFPLKSLPPSFRAEHLVELHLRKSKLVKLWTGVKDVGNLRRIDLSDSPYLTELPDLSMAK 687

Query: 456 NLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPG------KILMKS------ 503
           NL  L L  C  L E+  SL   +KL  + +  C +L + P       + L+ S      
Sbjct: 688 NLVSLDLTDCPSLTEVPSSLQYLDKLEKIYLFRCYNLRSFPMLDSKVLRFLLISRCLDVT 747

Query: 504 -------------LEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELH 550
                        LE+ ++K +P +++G   L  L +SG  +  +FPEI   +E L    
Sbjct: 748 TCPTISQNMEWLWLEQTSIKEVPQSVTG--KLERLCLSGCPEITKFPEISGDIEILD--- 802

Query: 551 LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP-E 609
           L GTAI+ +P SI+ L+ L +L++  C  LE LP     ++ L SLKLS  + +K+ P  
Sbjct: 803 LRGTAIKEVPSSIQFLTRLEVLDMSGCSKLESLPEITVPMESLHSLKLSK-TGIKEIPSS 861

Query: 610 IVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNL 669
           +++ M  L+ L LDGT IK +P   EL   L  L   DC +L  + SSI   +    L+ 
Sbjct: 862 LIKHMISLTFLNLDGTPIKALP---ELPPSLRYLTTHDCASLETVTSSINIGRLELGLDF 918

Query: 670 SGCFKLENVPETLG---QIESLEELD-------ISGTAVPHSTSWYSYIPINLMRKSVAL 719
           + CFKL+  P       +I+S EE+        + G+ +P    W+    I     S+ +
Sbjct: 919 TNCFKLDQKPLVAAMHLKIQSGEEIPDGGIQMVLPGSEIPE---WFGDKGIG---SSLTM 972

Query: 720 KLPS 723
           +LPS
Sbjct: 973 QLPS 976



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 182/407 (44%), Gaps = 69/407 (16%)

Query: 504 LEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSI 563
           L K  L  L T +  +  L  +D+S      E P++      +S    +  ++  +P S+
Sbjct: 648 LRKSKLVKLWTGVKDVGNLRRIDLSDSPYLTELPDLSMAKNLVSLDLTDCPSLTEVPSSL 707

Query: 564 ELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLD 623
           + L  L  + L  C +L   P+  S  K LR L +S C  +   P I ++M+    L+L+
Sbjct: 708 QYLDKLEKIYLFRCYNLRSFPMLDS--KVLRFLLISRCLDVTTCPTISQNME---WLWLE 762

Query: 624 GTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLG 683
            TSIKEVP S+                             L+ L LSGC ++   PE  G
Sbjct: 763 QTSIKEVPQSVT--------------------------GKLERLCLSGCPEITKFPEISG 796

Query: 684 QIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEG 743
            IE L   D+ GTA+    S                   S+  L  L  L+++ C+ +E 
Sbjct: 797 DIEIL---DLRGTAIKEVPS-------------------SIQFLTRLEVLDMSGCSKLE- 833

Query: 744 ALPSDIGNLCSLKELYLSKNSFVSLPTS-ITHLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
           +LP     + SL  L LSK     +P+S I H+  L  + L D   +++LP+LPP++R +
Sbjct: 834 SLPEITVPMESLHSLKLSKTGIKEIPSSLIKHMISLTFLNL-DGTPIKALPELPPSLRYL 892

Query: 803 RVNGCASLVTLLDALKLCKS----DSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQ 858
             + CASL T+  ++ + +     D T    LD   L+    L      E  +       
Sbjct: 893 TTHDCASLETVTSSINIGRLELGLDFTNCFKLDQKPLVAAMHLKIQSGEEIPDG------ 946

Query: 859 HLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
            + +V+PGSEIPEWF  +  GSS+T+  PSN +   +L G A C VF
Sbjct: 947 GIQMVLPGSEIPEWFGDKGIGSSLTMQLPSNCH---QLKGIAFCLVF 990


>gi|297794601|ref|XP_002865185.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311020|gb|EFH41444.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1185

 Score =  355 bits (910), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 254/727 (34%), Positives = 383/727 (52%), Gaps = 68/727 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M+    K+  L++  S +VRM+GI G  G+GKT+IAR +Y+ +S  F+ S F+D      
Sbjct: 189 MEDHIAKMSVLLNLESEEVRMVGIWGSSGIGKTSIARALYNQLSRRFQGSVFIDRAFVTK 248

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDG----IDMLGSR---LQRKKVLLVIDDVVDV 113
           SK    S      +  L L  + +  + D     I+ LG+    L R+KVL+ IDD+ D 
Sbjct: 249 SKSNYESANPDDYNMKLYLLRSFLSEILDKKNVRINHLGAAEETLNRRKVLIFIDDMDDQ 308

Query: 114 KQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY 173
             L +LAG  +WFG GSRII+ ++D+H L+ H +D +Y+    + D AL++F   AFK  
Sbjct: 309 VVLDTLAGQAQWFGCGSRIIVITKDKHFLRAHRIDHIYEVCLPSKDLALKIFCRSAFKKN 368

Query: 174 QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
            P +  + L++ +   AG LPL L+VLGS+L GR  ++    L RL      +I   L++
Sbjct: 369 SPPEGLMDLASEVALCAGNLPLGLKVLGSYLRGRDKEDLMDMLPRLRNSLDGKIEKTLRV 428

Query: 234 SFDGLQE-LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTL 292
           S+DGL +  +K IF  IAC F G   + +   L   G    IG++ L++K LI V    +
Sbjct: 429 SYDGLNDKKDKAIFRHIACLFNGEKANDIKLLLADSGLDVNIGLKNLVDKSLIHVRKEIV 488

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            MH LLQE+G++IV+ QS  E G+R  L   +E+C +L ++TGT+ V GI LD     +E
Sbjct: 489 EMHSLLQEMGKEIVRAQS-NEPGEREFLVDAKEICDLLEDNTGTKKVLGISLD-MDEIDE 546

Query: 353 VYLCASAKAFSKMTNLRLLKI----------CNLQLPNGLEYLSNRLRLLGWRGYPLKFL 402
           +++     AF  M NL  LK               LP G  YL ++LRLL   GYP++ +
Sbjct: 547 LHI--HENAFKGMRNLIFLKFYTKKWDQKNEVRWHLPEGFNYLPHKLRLLRLDGYPMRHM 604

Query: 403 PSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
           PSN + +  +E++M  S++  LW+G++ L  LK + L  S+NL  +P+ + A NLE+L L
Sbjct: 605 PSNFRTENLVELHMPGSKLERLWEGVQELKGLKTINLHRSKNLKEIPNLSMATNLEELHL 664

Query: 463 EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCL 522
             C+ L E+  S+   NKL  L M  C +L  LP  I ++SL  LNLK      SGLK  
Sbjct: 665 GDCSSLVELSSSVQYLNKLKSLVMSGCINLEILPTGINLQSLFSLNLKG----CSGLKIF 720

Query: 523 STLDVS------GDLKFREFPE-----------------------------IVEHMEH-L 546
             +  +       +    EFP                              ++  + H L
Sbjct: 721 PNISTNISWLILDETSIEEFPSNLRLDNLLLLSMCRMKSQKLWDRKQPLTPLMAMLPHSL 780

Query: 547 SELHLEGT-AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
            EL L    ++  +P SI+  + L  L +++C +LE LP  + N   L SL LSGCS+LK
Sbjct: 781 EELFLSDIPSLVDIPSSIQNFTHLDCLGIEDCINLETLPTGI-NFHHLESLNLSGCSRLK 839

Query: 606 KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLK 665
            FP I     ++ +L+L  T I+EVP  IE  TKL+ + +  C NL+R+  +I  LK L 
Sbjct: 840 TFPNIS---TNIEQLYLQRTGIEEVPWWIEKFTKLDYITMEKCNNLIRVSLNIYKLKRL- 895

Query: 666 TLNLSGC 672
            ++ S C
Sbjct: 896 MVDFSDC 902



 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 134/545 (24%), Positives = 213/545 (39%), Gaps = 147/545 (26%)

Query: 509  LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHL-EGTAIRGLPLSIELLS 567
            L+ L   +  LK L T+++      +E P +     +L ELHL + +++  L  S++ L+
Sbjct: 623  LERLWEGVQELKGLKTINLHRSKNLKEIPNL-SMATNLEELHLGDCSSLVELSSSVQYLN 681

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSI 627
             L  L +  C +LEILP  + NL+ L SL L GCS LK FP I     ++S L LD TSI
Sbjct: 682  KLKSLVMSGCINLEILPTGI-NLQSLFSLNLKGCSGLKIFPNIS---TNISWLILDETSI 737

Query: 628  KEVPSSIE------------------------------LLTKLELLNLSDCKNLVRLPSS 657
            +E PS++                               L   LE L LSD  +LV +PSS
Sbjct: 738  EEFPSNLRLDNLLLLSMCRMKSQKLWDRKQPLTPLMAMLPHSLEELFLSDIPSLVDIPSS 797

Query: 658  IIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSV 717
            I     L  L +  C  LE +P              +G    H                 
Sbjct: 798  IQNFTHLDCLGIEDCINLETLP--------------TGINFHH----------------- 826

Query: 718  ALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSK 777
                        L  LNL+ C+ ++   P+   N+   ++LYL +     +P  I   +K
Sbjct: 827  ------------LESLNLSGCSRLK-TFPNISTNI---EQLYLQRTGIEEVPWWIEKFTK 870

Query: 778  LLNIELEDCKRLQSLPQLPPNIRQVRVN--GCASLVTLLDALKLCKSDSTMIACLDSLKL 835
            L  I +E C  L  +      ++++ V+   C SL     +     S+  M+        
Sbjct: 871  LDYITMEKCNNLIRVSLNIYKLKRLMVDFSDCGSLTEA--SWNGSPSEVAMVT------- 921

Query: 836  LGNKSLAFSMLREYLEAVSNT--------------------RQHL---SVVVPGSEIPEW 872
              N    F +L E   +  ++                    RQ     S+ + G E+P +
Sbjct: 922  -DNIHSKFPVLEEAFYSDPDSTPPEFWFNFHFLNLDPEALLRQRFIFNSITLSGEEVPSY 980

Query: 873  FMYQNEG---SSITVTRPSNLYNKKKLVGYAICCV--FHVLKNSRGNNCFGSYPTHQLNC 927
            F +Q      +SI + +PS     ++   +  C V  F  L  + G   FG Y   ++NC
Sbjct: 981  FTHQTTEISLTSIPLLQPS---LSQQFFKFKACAVVSFDSLFLTWG---FGVYI--RVNC 1032

Query: 928  HIG--HGIYGIGFRDKFGQAGS---DHLWLLYLSRQTCYDIRLPLESN---LEPFESNHV 979
                 HG     F    G +GS   ++L++L        D R+PL  +   L     +HV
Sbjct: 1033 RFKDRHGNSFDTFGQPHGFSGSKKDNNLFIL--------DCRVPLNKDNAALAQLNYDHV 1084

Query: 980  NVSFE 984
            ++  +
Sbjct: 1085 DMEIQ 1089



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 123/232 (53%), Gaps = 31/232 (13%)

Query: 602 SKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           SKL++  E V+ +K L  + L  + ++KE+P+ + + T LE L+L DC +LV L SS+  
Sbjct: 621 SKLERLWEGVQELKGLKTINLHRSKNLKEIPN-LSMATNLEELHLGDCSSLVELSSSVQY 679

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA----VPHSTSWYSYIPINLMRKS 716
           L  LK+L +SGC  LE +P  +  ++SL  L++ G +     P+ ++  S++   ++ ++
Sbjct: 680 LNKLKSLVMSGCINLEILPTGIN-LQSLFSLNLKGCSGLKIFPNISTNISWL---ILDET 735

Query: 717 VALKLPS--------LSGLCSLRKLNLTD----CNLMEGALPSDIGNLCSLKELYLSK-N 763
              + PS        L  +C ++   L D       +   LP       SL+EL+LS   
Sbjct: 736 SIEEFPSNLRLDNLLLLSMCRMKSQKLWDRKQPLTPLMAMLPH------SLEELFLSDIP 789

Query: 764 SFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPP--NIRQVRVNGCASLVTL 813
           S V +P+SI + + L  + +EDC  L++LP      ++  + ++GC+ L T 
Sbjct: 790 SLVDIPSSIQNFTHLDCLGIEDCINLETLPTGINFHHLESLNLSGCSRLKTF 841


>gi|356542397|ref|XP_003539653.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1376

 Score =  355 bits (910), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 263/704 (37%), Positives = 379/704 (53%), Gaps = 42/704 (5%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHE-FEASGFLDNVRE 58
           +D   E+++  +D  S+D V ++GI G GG+GKTT A  +Y+ I H  FEA+ FL  VRE
Sbjct: 185 LDDHFEQVKAFIDVESNDKVGVLGIYGGGGIGKTTFAVYLYEKIRHYYFEAASFLIKVRE 244

Query: 59  IS--SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQL 116
            S  SK  L  LQ +LLSQL       I +   G   +  RL  ++VLLV+DDV   +QL
Sbjct: 245 QSKESKNHLEDLQNRLLSQLGVDTGTMIGSTNKGELEIKHRLGHRRVLLVLDDVDSKEQL 304

Query: 117 QSLAGNREWFGSGSRIIITSRDEHLLKTHGVD-EVYKPHGLNYDEALQLFNMKAFKTYQP 175
           + LAG  +WFGSGSRIIIT+RDE +L  +GV  + YK   LN   +L+LF   AF   +P
Sbjct: 305 ELLAGKHDWFGSGSRIIITTRDEAVL-DYGVKVKKYKMTELNDRHSLELFCQNAFDKPEP 363

Query: 176 LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
            +    +S R I YA G+PLAL+V+GS L GRS++EW   L +    P ++I  +L++SF
Sbjct: 364 AKNFESISHRAIGYAKGVPLALQVIGSNLKGRSIEEWEIELGKYRKVPNAKIQGVLKLSF 423

Query: 236 DGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWM 294
           D L E E  IFLDIACFFKG   +YV   L+       I  +VL  KCLI V  N+ L M
Sbjct: 424 DSLPETEMGIFLDIACFFKGEKWNYVKRILKASD----ISFKVLASKCLIMVDRNDCLEM 479

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           HDL+Q++G++IV+ QSP   G RSRLW  E+V  VL + +G+  +EGI+L  +  + EV 
Sbjct: 480 HDLIQDMGREIVRNQSPSNPGDRSRLWSHEDVLEVLKKDSGSITIEGIML--HPPKLEVV 537

Query: 355 LCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
              +  AF KM NLR+L + N +   G   L N+L+LL W G+P +  P        ++ 
Sbjct: 538 DKWTDTAFEKMKNLRILIVRNTKFLTGPSSLPNKLQLLDWIGFPSESFPPKFDPKNIVDF 597

Query: 415 YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
            + +S +  +    K    L  + LS    + ++PD   A NL  L ++ C +L   HPS
Sbjct: 598 KLSHSSLVSIKPPQKVFQNLTFVNLSQCHFITKIPDMFEAKNLRVLTIDKCPKLEGFHPS 657

Query: 475 LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFR 534
                 L+ L+  +CT L +   K+ +  LE L+                       K +
Sbjct: 658 AGHMPNLVYLSASECTMLTSFVPKMNLPYLEMLSFNFCS------------------KLQ 699

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
           EFPE+   M+   ++H+  TAI   P SI  ++GL  +++  CR L+ L   VS L  L 
Sbjct: 700 EFPEVGGKMDKPLKIHMINTAIEKFPKSICKVTGLEYVDMTTCRELKDLSSFVS-LPKLV 758

Query: 595 SLKLSGCSKLKKFPEIVR-------SMKDLSELFLDGTSIKEVPSSI--ELLTKLELLNL 645
           +LK++GCS+L +  ++ R       S   L  L+L   ++     SI  E+  KLE LN+
Sbjct: 759 TLKMNGCSQLAESFKMFRKSHSEANSCPSLKALYLSKANLSHEDLSIILEIFPKLEYLNV 818

Query: 646 SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLE 689
           S       LP  I     LK LNLS C  L+ +PE    I+ ++
Sbjct: 819 SH-NEFESLPDCIKGSLQLKKLNLSFCRNLKEIPELPSSIQRVD 861


>gi|15239799|ref|NP_199725.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10176947|dbj|BAB10096.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332008392|gb|AED95775.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 980

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 250/783 (31%), Positives = 407/783 (51%), Gaps = 84/783 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVR--- 57
           ++S  EK+  L+     DVRM+GI G  G+GKTTIARV++   S +F  + F++NVR   
Sbjct: 189 IESHMEKMVQLLCLNDDDVRMVGIWGPAGIGKTTIARVLHSRFSGDFRFTVFMENVRGNY 248

Query: 58  -EISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQL 116
             I   GG  +LQ +L  + L +  N      + +  +  RL+++KVL+V+ DV  V+QL
Sbjct: 249 QRIVDSGGEYNLQARLQKEFLPIIFNQKDRKINHLWKIEERLKKQKVLIVLGDVDKVEQL 308

Query: 117 QSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
           ++LA    WFG GSRII+T++D+ +L  H ++ +Y+        AL++  + AFK     
Sbjct: 309 EALANETRWFGPGSRIIVTTKDKQILVGHEINHIYEVKLPCRKTALEILCLYAFKQNVAP 368

Query: 177 QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
            + + +   +   +G LPL L VLGS + G+S D W+  L RL      ++  IL+IS+D
Sbjct: 369 DDFMDVVVEVAELSGHLPLGLRVLGSHMRGKSKDRWKLELGRLTTSLDEKVEKILKISYD 428

Query: 237 GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWMH 295
            L   +K +FL IAC F G + D V   L        +G+++L++K LI ++++  + MH
Sbjct: 429 DLHIRDKALFLHIACMFNGENIDLVKQMLVNSDLDVSLGLQLLLDKSLIQINDDREIVMH 488

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
            LL ++G+++V + S E  GKR  L+  +E C++L+ +TG+E V GI LD    +N+V++
Sbjct: 489 SLLLKMGKEVVCQHSSEP-GKRQFLFNTKETCNILSNNTGSEAVLGISLDTSEIQNDVFM 547

Query: 356 CASAKAFSKMTNLRLLKICN----------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSN 405
             S + F  M NL+ L+  N          L LP GL YL   +RLL W  YP+K++PS 
Sbjct: 548 --SERVFEDMRNLKFLRFYNKKIDENPSLKLHLPRGLNYLP-AVRLLHWDSYPMKYIPSQ 604

Query: 406 LQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
            + +  +E+ M +S++ +LW+G + L  LK + LS S NL+ +PD + A +LE L LEGC
Sbjct: 605 FRPECLVELRMMHSKVVKLWEGTQTLAYLKTIDLSFSNNLVEVPDLSKAISLETLCLEGC 664

Query: 466 TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTL 525
             L E+  S+L  ++L  L +  C  L  +P  I + SLE                   L
Sbjct: 665 QSLAELPSSVLNLHRLKWLRLTMCEKLEVIPLHINLASLE------------------VL 706

Query: 526 DVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPV 585
           D+ G LK + FP+I +++E    + ++ T I                        E +P 
Sbjct: 707 DMEGCLKLKSFPDISKNIER---IFMKNTGI------------------------EEIPP 739

Query: 586 TVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNL 645
           ++S    L SL +SGC  LK F  + +S   +  ++L  + I+ +P  I+ LT L  L +
Sbjct: 740 SISQWSRLESLDISGCLNLKIFSHVPKS---VVYIYLTDSGIERLPDCIKDLTWLHYLYV 796

Query: 646 SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL----GQIESLEELDISGTAVPHS 701
            +C+ LV LP    ++K L  +N   C  LE +  +      ++E  + ++  G A    
Sbjct: 797 DNCRKLVSLPELPSSIKILSAIN---CESLERISSSFDCPNAKVEFSKSMNFDGEARRVI 853

Query: 702 TSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGAL---------PSDIGNL 752
           T  + Y    L  K V L+    +   SL  ++L D N+   +L         PS+  N+
Sbjct: 854 TQQWVYKRACLPGKEVPLEFSHRARGGSL-TIHLEDENVCSSSLRFKACILLFPSERNNI 912

Query: 753 CSL 755
           C++
Sbjct: 913 CTV 915



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 147/299 (49%), Gaps = 27/299 (9%)

Query: 591 KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLD-GTSIKEVPSSIELLTKLELLNLSDCK 649
           +CL  L++   SK+ K  E  +++  L  + L    ++ EVP   + ++ LE L L  C+
Sbjct: 608 ECLVELRMMH-SKVVKLWEGTQTLAYLKTIDLSFSNNLVEVPDLSKAIS-LETLCLEGCQ 665

Query: 650 NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIP 709
           +L  LPSS++ L  LK L L+ C KLE +P  +  + SLE LD+ G     S    S   
Sbjct: 666 SLAELPSSVLNLHRLKWLRLTMCEKLEVIPLHIN-LASLEVLDMEGCLKLKSFPDISKNI 724

Query: 710 INLMRKSVALK--LPSLSGLCSLRKLNLTDC-NL-MEGALPSDIGNLCSLKELYLSKNSF 765
             +  K+  ++   PS+S    L  L+++ C NL +   +P       S+  +YL+ +  
Sbjct: 725 ERIFMKNTGIEEIPPSISQWSRLESLDISGCLNLKIFSHVPK------SVVYIYLTDSGI 778

Query: 766 VSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDST 825
             LP  I  L+ L  + +++C++L SLP+LP +I+ +    C SL  +          S+
Sbjct: 779 ERLPDCIKDLTWLHYLYVDNCRKLVSLPELPSSIKILSAINCESLERI----------SS 828

Query: 826 MIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
              C ++ K+  +KS+ F    E    ++    +    +PG E+P  F ++  G S+T+
Sbjct: 829 SFDCPNA-KVEFSKSMNFD--GEARRVITQQWVYKRACLPGKEVPLEFSHRARGGSLTI 884


>gi|26449414|dbj|BAC41834.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 1187

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 255/709 (35%), Positives = 386/709 (54%), Gaps = 67/709 (9%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
           +R +GI GM G+GKTT+A+ V+D +S  F+AS F+++  +   + GL  L   L  QLL 
Sbjct: 172 IRCVGIWGMPGIGKTTLAKAVFDQMSSAFDASCFIEDYDKSIHEKGLYCL---LEEQLLP 228

Query: 79  LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
             D +I      +  L  RL  K+VL+V+DDV +    +S     +W G GS IIITSRD
Sbjct: 229 GNDATIMK----LSSLRDRLNSKRVLVVLDDVRNALVGESFLEGFDWLGPGSLIIITSRD 284

Query: 139 EHLLKTHGVDEVYKPHGLNYDEALQLFNMKA-FKTYQPLQECVQLSARIIRYAGGLPLAL 197
           + +    G++++Y+  GLN  EA QLF + A  K     Q   +LS R+I YA G PLA+
Sbjct: 285 KQVFCLCGINQIYEVQGLNEKEARQLFLLSASIKEDMGEQNLQELSVRVINYANGNPLAI 344

Query: 198 EVLGSFLSGRS-VDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGN 256
            V G  L G+  + E  +   +L+  PP +I+D  + ++D L + EK IF DIACFF+G 
Sbjct: 345 SVYGRELKGKKKLSEMETAFLKLKRRPPFKIVDAFKSTYDTLSDNEKNIFSDIACFFQGE 404

Query: 257 DRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGK 316
           + +YV   LEGCGF P + I VL++KCL+T+  N +W+H L Q++G++I+  ++  ++ +
Sbjct: 405 NVNYVIQLLEGCGFFPHVEIDVLVDKCLVTISENRVWLHKLTQDIGREIINGETV-QIER 463

Query: 317 RSRLWKEEEVCHVL---------------TESTGTELVEGIVLDNYHHENEVYLCASAKA 361
           R RLW+   + ++L                 + G+E +EG+ LD  +   ++       A
Sbjct: 464 RRRLWEPWSIKYLLEYNEHKANGEPKTTFKRAQGSEEIEGLFLDTSNLRFDL----QPSA 519

Query: 362 FSKMTNLRLLKI-CN-------LQLPNG-LEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
           F  M NLRLLKI C+       +  P G L  L N LRLL W  YPLK LP N      +
Sbjct: 520 FKNMLNLRLLKIYCSNPEVHPVINFPTGSLHSLPNELRLLHWENYPLKSLPQNFDPRHLV 579

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
           EI M YS++ +LW G K+L+ L+ + L HS +L+ + D   A NLE + L+GCTRL    
Sbjct: 580 EINMPYSQLQKLWGGTKNLEMLRTIRLCHSHHLVDIDDLLKAENLEVIDLQGCTRLQNF- 638

Query: 473 PSLLLHNKLIILNMKDC---TSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG 529
           P+     +L ++N+  C    S++ +P  I    L+   + +LP +         ++   
Sbjct: 639 PAAGRLLRLRVVNLSGCIKIKSVLEIPPNIEKLHLQGTGILALPVSTVKPNHRELVNF-- 696

Query: 530 DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSN 589
                E P + E +E L+ L LE  +      S + L  L+ L LK+C  L+ LP  ++N
Sbjct: 697 ---LTEIPGLSEELERLTSL-LESNS------SCQDLGKLICLELKDCSCLQSLP-NMAN 745

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK 649
           L  L  L LSGCS L       R +K   +L+L GT+I+EVP   +L   LE+LN +   
Sbjct: 746 LD-LNVLDLSGCSSLNSIQGFPRFLK---QLYLGGTAIREVP---QLPQSLEILN-AHGS 797

Query: 650 NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
            L  LP ++  L+ LK L+LSGC +LE +    G   +L+EL  +GT +
Sbjct: 798 CLRSLP-NMANLEFLKVLDLSGCSELETIQ---GFPRNLKELYFAGTTL 842



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 52/83 (62%), Gaps = 1/83 (1%)

Query: 229  DILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH 288
            ++L++S+D LQE++K +FL IA  F   D D+V   + G       G++VL +  LI+V 
Sbjct: 1085 EVLRVSYDDLQEMDKVLFLYIASLFNDEDVDFVAPLIAGIDLDVSSGLKVLADVSLISVS 1144

Query: 289  NN-TLWMHDLLQELGQQIVQRQS 310
            +N  + MH L +++G++I+  QS
Sbjct: 1145 SNGEIVMHSLQRQMGKEILHGQS 1167



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 37/175 (21%)

Query: 640 LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP 699
           LE+++L  C  L   P++   L+ L+ +NLSGC K+++V E    IE L        A+P
Sbjct: 624 LEVIDLQGCTRLQNFPAAGRLLR-LRVVNLSGCIKIKSVLEIPPNIEKLHLQGTGILALP 682

Query: 700 HSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELY 759
            ST      P +    +   ++P LS                      ++  L SL    
Sbjct: 683 VST----VKPNHRELVNFLTEIPGLS---------------------EELERLTSL---- 713

Query: 760 LSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPP-NIRQVRVNGCASLVTL 813
           L  NS      S   L KL+ +EL+DC  LQSLP +   ++  + ++GC+SL ++
Sbjct: 714 LESNS------SCQDLGKLICLELKDCSCLQSLPNMANLDLNVLDLSGCSSLNSI 762


>gi|359493210|ref|XP_002269168.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 992

 Score =  354 bits (908), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 234/564 (41%), Positives = 343/564 (60%), Gaps = 40/564 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M  R +KLR L++   ++V ++GICG+GG+GKTTIA+ +Y++IS++FE   FL NVRE S
Sbjct: 193 MSIRLKKLRSLINIDLNNVLVVGICGIGGIGKTTIAKALYNVISYKFEGVSFLANVRENS 252

Query: 61  SKG-GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
               GL+ LQ+QLL  + K  +  I NV +G+D +   L  K+VL+V+DDV + KQ+++L
Sbjct: 253 KDDVGLLRLQQQLLDDIRKRKNQQISNVHEGMDAIKKVLSLKRVLVVLDDVDNCKQVENL 312

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKP-HGLNYDEALQLFNMKAFKTYQPLQE 178
            G R+ F  GSRI+IT+RD H L  +G D+ Y     LN +EALQLF++ AFK     ++
Sbjct: 313 VGKRDCFVRGSRILITTRDRHPLDAYGADKPYHEIEELNSEEALQLFSLYAFKPNCHQED 372

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
              LS  I++YA GLPL L VLGS L  R+ ++W+S L +LE EP  +I ++L+IS++GL
Sbjct: 373 YEDLSNHIVKYAKGLPLVLRVLGSHLCERTPNQWKSELHKLEREPVQDIQNVLKISYNGL 432

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
              + +IFLDIACFFKG D+D+V+  L+GC  +   G  VL ++ LIT+ +N + MHDL+
Sbjct: 433 DRTQGEIFLDIACFFKGQDKDFVSRILDGCDLYAESGFSVLCDRSLITILDNKIHMHDLI 492

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           Q++G  IV+ Q P+E GK SRLW+ ++V HVLT +TGT+ +EGI LD         L  +
Sbjct: 493 QQMGWHIVREQYPKEPGKWSRLWEPKDVFHVLTRNTGTKAIEGIFLD---MSTSKQLQFT 549

Query: 359 AKAFSKMTNLRLLK---------ICNLQLP--------------NGLEYLSNRLRLLGWR 395
            KAF +M  LRLLK         I N   P                 E+ S  LR L W 
Sbjct: 550 TKAFKRMKMLRLLKVHRDAKYDSIVNSLTPVEPSKVLLSQEHFCRDFEFPSQELRYLHWD 609

Query: 396 GYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAP 455
           GYP++ LPSN   +  +E+ +  S I +LW+  + L+KLKV+ LSH ++L ++P+ +  P
Sbjct: 610 GYPMESLPSNFYAENLVELNLRCSNIKQLWE-TELLEKLKVIDLSHCQHLNKIPNPSSVP 668

Query: 456 NLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI-LMKSLEKLN------ 508
           NLE L L+GC  L  +  ++     L  L + + T+++ LP  I  +K LE L+      
Sbjct: 669 NLEILTLKGCINLETLPENMGNMENLRQLYL-NYTAILNLPSSIEHLKGLEYLSLECFSC 727

Query: 509 ---LKSLPTTISGLKCLSTLDVSG 529
              L+ LP  +  LK L TL + G
Sbjct: 728 CSKLEKLPEDLKSLKRLETLSLHG 751



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 137/319 (42%), Gaps = 51/319 (15%)

Query: 720  KLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLL 779
            K+P+ S + +L  L L  C  +E  LP ++GN+ +L++LYL+  + ++LP+SI HL  L 
Sbjct: 660  KIPNPSSVPNLEILTLKGCINLE-TLPENMGNMENLRQLYLNYTAILNLPSSIEHLKGLE 718

Query: 780  NIELE---DCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALK-------LCKSDSTMIAC 829
             + LE    C +L+ LP+   +++++       L   L ++           S+   + C
Sbjct: 719  YLSLECFSCCSKLEKLPEDLKSLKRLETLSLHGLNCQLPSVSGPSSFLPSSFSEFQDLVC 778

Query: 830  LDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPG-SEIPEWFMYQNEGSSITVTRPS 888
              S +L  + S ++     + E V       S+  PG S IPEW M +N G+ +T+  P 
Sbjct: 779  GSSFQLYLDDSYSY-----FEEGV-------SIFFPGISGIPEWIMGENMGNHVTIDLPQ 826

Query: 889  NLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTH-----QLNCHIGHGIYGIGFRDKF- 942
            + Y  K  +G+A+C  +    +  GN     + +      Q  C +   +   G +  F 
Sbjct: 827  DWYEDKDFLGFALCSAYVPPDDQSGNGSAYKFDSKSKDEDQSPCSLHCNLTFHGDQSAFS 886

Query: 943  -------------GQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWL-G 988
                             S  +W+LY         +  +E      +   +  SF  +  G
Sbjct: 887  IYPSLSSLCECCENDGASGQVWVLYYP-------KFAIEEKYHSNKWGRLKASFHGYFNG 939

Query: 989  QGLEVKMCGLHPVYMDEVE 1007
              ++V+ CG+  +Y    E
Sbjct: 940  MPMKVEKCGMQLIYAKNDE 958



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/133 (39%), Positives = 81/133 (60%), Gaps = 5/133 (3%)

Query: 542 HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
           + E+L EL+L  + I+ L    ELL  L +++L +C+ L  +P   S++  L  L L GC
Sbjct: 621 YAENLVELNLRCSNIKQL-WETELLEKLKVIDLSHCQHLNKIP-NPSSVPNLEILTLKGC 678

Query: 602 SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNL---SDCKNLVRLPSSI 658
             L+  PE + +M++L +L+L+ T+I  +PSSIE L  LE L+L   S C  L +LP  +
Sbjct: 679 INLETLPENMGNMENLRQLYLNYTAILNLPSSIEHLKGLEYLSLECFSCCSKLEKLPEDL 738

Query: 659 IALKSLKTLNLSG 671
            +LK L+TL+L G
Sbjct: 739 KSLKRLETLSLHG 751


>gi|356561818|ref|XP_003549175.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1122

 Score =  354 bits (908), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 230/583 (39%), Positives = 325/583 (55%), Gaps = 28/583 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++S   ++  L+D GS DV  +IGI GMGGLGKTT+A  V++ I+  F+ S FL NVRE 
Sbjct: 229 LESEVTEVMKLLDVGSHDVVHIIGIHGMGGLGKTTLALAVHNFIALHFDESCFLQNVREE 288

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  LLS+LL   D ++ +  +G  M+  RLQRKKVLL++DDV   +QL+++
Sbjct: 289 SNKHGLKHLQSILLSKLLGEKDITLTSWQEGASMIQHRLQRKKVLLILDDVDKRQQLKAI 348

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G  +WFG GSR+IIT+RD+HLLK H V+  Y+   LN   ALQL    AFK  +     
Sbjct: 349 VGRPDWFGPGSRVIITTRDKHLLKYHEVERTYEVKVLNQSAALQLLTWNAFKREKIDPSY 408

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R++ YA GLPLALEV+GS L  ++V EW S +E  +  P  EI +IL++SFD L 
Sbjct: 409 EDVLNRVVTYASGLPLALEVIGSNLFEKTVAEWESAMEHYKRIPSDEIQEILKVSFDALG 468

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLE----GCGFHPVIGIRVLIEKCLITVH-NNTLWM 294
           E +K +FLDIAC FKG +   V N L      C  H    I VL+EK L+ V   +T+ M
Sbjct: 469 EEQKNVFLDIACCFKGYEWTEVDNILRDLYGNCTKH---HIGVLVEKSLVKVSCCDTVEM 525

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           HD++Q++G++I +++SPEE GK  RL   +++  VL ++TGT  +E I LD    + E  
Sbjct: 526 HDMIQDMGREIERQRSPEEPGKCKRLLLPKDIIQVLKDNTGTSKIEIICLDFSISDKEET 585

Query: 355 LCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
           +  +  AF KM NL++L I N +   G  Y    LR+L W  YP   LPSN      +  
Sbjct: 586 VEWNENAFMKMKNLKILIIRNCKFSKGPNYFPEGLRVLEWHRYPSNCLPSNFDPINLVIC 645

Query: 415 YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
            +  S I            LK++     E L ++PD +  PNL++L    C  L  +  S
Sbjct: 646 KLPDSSITSFEFHGSSKASLKILNFDRCEFLTKIPDVSDLPNLKELSFNWCESLVAVDDS 705

Query: 475 LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFR 534
           +   NKL  L+   C  L + P          LNL S          L TL++ G     
Sbjct: 706 IGFLNKLKTLSAYGCRKLTSFP---------PLNLTS----------LETLNLGGCSSLE 746

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNC 577
            FPEI+  M++++ L L    I+ LP S + L GL+ L L +C
Sbjct: 747 YFPEILGEMKNITVLALHDLPIKELPFSFQNLIGLLFLWLDSC 789



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 131/330 (39%), Gaps = 69/330 (20%)

Query: 588 SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLS 646
           S+   L+ L    C  L K P+ V  + +L EL  +   S+  V  SI  L KL+ L+  
Sbjct: 660 SSKASLKILNFDRCEFLTKIPD-VSDLPNLKELSFNWCESLVAVDDSIGFLNKLKTLSAY 718

Query: 647 DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL---DISGTAVPHSTS 703
            C+ L   P   + L SL+TLNL GC  LE  PE LG+++++  L   D+    +P S  
Sbjct: 719 GCRKLTSFPP--LNLTSLETLNLGGCSSLEYFPEILGEMKNITVLALHDLPIKELPFSFQ 776

Query: 704 --------WYSYIPINLMRKSVALKLPSLSGLC----------------------SLRKL 733
                   W     I  +R S+A  +P L   C                      S+   
Sbjct: 777 NLIGLLFLWLDSCGIVQLRCSLA-TMPKLCEFCITDSCNRWQWVESEEGEEKVVGSILSF 835

Query: 734 NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
             TDCNL +            +  L L  N+F  LP     L  L  + + DCK LQ + 
Sbjct: 836 EATDCNLCDDFFFIGSKRFAHVGYLNLPGNNFTILPEFFKELQFLTTLVVHDCKHLQEIR 895

Query: 794 QLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAV 853
            LPPN++      CASL +                   S  +L N+ L            
Sbjct: 896 GLPPNLKHFDARNCASLTS------------------SSKSMLLNQEL------------ 925

Query: 854 SNTRQHLSVVVPGSEIPEWFMYQNEGSSIT 883
            +    +  V PG+ IPEWF  Q+ G SI+
Sbjct: 926 -HEAGGIEFVFPGTSIPEWFDQQSSGHSIS 954


>gi|255561520|ref|XP_002521770.1| conserved hypothetical protein [Ricinus communis]
 gi|223538983|gb|EEF40580.1| conserved hypothetical protein [Ricinus communis]
          Length = 465

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 200/443 (45%), Positives = 281/443 (63%), Gaps = 20/443 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DSR E++  L+  GSSDV ++GI GM G+GKTTIA  V+      F+   F  NVRE S
Sbjct: 9   IDSRIERVESLLCLGSSDVSIVGIWGMAGIGKTTIAEAVFKRNVASFDTCYFFANVREES 68

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL- 119
            K G + L+ QLLS++   A       F       +RL   K L+V+DDV    Q+Q L 
Sbjct: 69  EKHGSLHLRTQLLSKICGKAH------FRRFTYRKNRLSHGKALIVLDDVNSSLQMQELL 122

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
              R  FG GS++I+TSRD  +LK +GVDE+Y+  GLN +EALQLF++  F    PL+E 
Sbjct: 123 VEGRHLFGEGSKVIVTSRDRQVLK-NGVDEIYEVDGLNLNEALQLFSINCFNQNHPLEEF 181

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           +QLS R+I YA G PLAL+VLG FL  +S  +W   L++L+      + ++L++S+DGL+
Sbjct: 182 MQLSKRVIYYAKGNPLALKVLGCFLLDKSKQDWEIALDKLKRTSNIGMKNVLRLSYDGLE 241

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
             +K+IFLDIACFFKG D  +V   L+GCGF+  IG+  L++K LITV N  LWMHDL+Q
Sbjct: 242 IEDKEIFLDIACFFKGEDVCFVERILDGCGFYVDIGLNNLVDKSLITVSNGKLWMHDLIQ 301

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G + VQ++S  E G+RSRLW  E++ HVLT++TGT+ VEGI LD      E++L  ++
Sbjct: 302 EMGWETVQQESTGEPGERSRLWHHEDIYHVLTKNTGTKAVEGITLD-LSETRELHL--TS 358

Query: 360 KAFSKMTNLRLLK--------ICNLQLPN-GLEYLSNRLRLLGWRGYPLKFLPSNLQMDK 410
           +AF KM NLRLLK         C +  P+ GL + SN+LR L W  YP K LP N   + 
Sbjct: 359 EAFKKMYNLRLLKFHDSDFEDFCKVHFPDEGLSFHSNKLRYLHWYKYPSKSLPYNFSPEN 418

Query: 411 TIEIYMCYSRIGELWKGIKHLDK 433
            +E+ +  S + +LW+G+++  K
Sbjct: 419 LVELNLPRSNVEQLWQGVQNRTK 441


>gi|2853078|emb|CAA16928.1| TMV resistance protein N-like [Arabidopsis thaliana]
 gi|7268747|emb|CAB78953.1| TMV resistance protein N-like [Arabidopsis thaliana]
          Length = 1164

 Score =  353 bits (906), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 246/702 (35%), Positives = 389/702 (55%), Gaps = 67/702 (9%)

Query: 1   MDSRCEKL-RFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR ++L + LM      VR++G+ GM G+GKTT+A +VY      F+   FL+++ + 
Sbjct: 202 IESRSKELEKLLMFDNDECVRVVGVLGMTGIGKTTVADIVYKQNFQRFDGYEFLEDIEDN 261

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDG--IDMLG-----SRLQRKKVLLVIDDVVD 112
           S + GL  L ++LL +LL           DG  +D+       + L+ KK+ +V+D+V +
Sbjct: 262 SKRYGLPYLYQKLLHKLL-----------DGENVDVRAQGRPENFLRNKKLFIVLDNVTE 310

Query: 113 VKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKT 172
            KQ++ L G +  +  GSRI+I +RD+ LL+ +  D  Y    LN  EA++LF ++ F  
Sbjct: 311 EKQIEYLIGKKNVYRQGSRIVIITRDKKLLQKNA-DATYVVPRLNDREAMELFCLQVFGN 369

Query: 173 YQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQ 232
           + P +E V LS   + YA GLPLAL++LG  L    ++ W+  LE L++ P  E+   L+
Sbjct: 370 HYPTEEFVDLSNDFVCYAKGLPLALKLLGKGLLTHDINYWKKKLEFLQVNPDKELQKELK 429

Query: 233 ISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTL 292
            S+  L + +K +FLDIACFF+    D+V++ L+         +R L EKCL+T+  + +
Sbjct: 430 SSYKALDDDQKSVFLDIACFFRSEKADFVSSILKSDDIDAKDVMRELEEKCLVTISYDRI 489

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            MHDLL  +G++I + +S  + G+R RLW  +++  +L  +TGTE V GI L N      
Sbjct: 490 EMHDLLHAMGKEIGKEKSIRKAGERRRLWNHKDIRDILEHNTGTECVRGIFL-NMSEVRR 548

Query: 353 VYLCASAKAFSKMTNLRLLKI--------CN----LQLPNGLEYLSNRLRLLGWRGYPLK 400
           + L  +  AF+ ++ L+ LK         C+     Q     ++  + L  L W+GYP  
Sbjct: 549 IKLFPA--AFTMLSKLKFLKFHSSHCSQWCDNDHIFQCSKVPDHFPDELVYLHWQGYPYD 606

Query: 401 FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
            LPS+    + +++ + YS I +LW+  K+ + L+ + L  S++L+ +   + A NLE+L
Sbjct: 607 CLPSDFDPKELVDLSLRYSHIKQLWEDEKNTESLRWVDLGQSKDLLNLSGLSRAKNLERL 666

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLK 520
            LEGCT L ++  S+   N+LI LN++DCTSL +LP    +KSL+               
Sbjct: 667 DLEGCTSL-DLLGSVKQMNELIYLNLRDCTSLESLPKGFKIKSLK--------------- 710

Query: 521 CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL 580
              TL +SG LK ++F  I E +E    LHLEGTAI  +   IE L  L+LLNLKNC  L
Sbjct: 711 ---TLILSGCLKLKDFHIISESIE---SLHLEGTAIERVVEHIESLHSLILLNLKNCEKL 764

Query: 581 EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
           + LP  +  LK L+ L LSGCS L+  P I   M+ L  L +DGTSIK+ P  +  L+ L
Sbjct: 765 KYLPNDLYKLKSLQELVLSGCSALESLPPIKEKMECLEILLMDGTSIKQTP-EMSCLSNL 823

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
           ++ +   C+ ++   + +        L+  GC  LENV + L
Sbjct: 824 KICSF--CRPVIDDSTGLY-------LDAHGCGSLENVSKPL 856



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 154/341 (45%), Gaps = 67/341 (19%)

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           ++L  L LEG     L  S++ ++ L+ LNL++C SLE LP     +K L++L LSGC K
Sbjct: 661 KNLERLDLEGCTSLDLLGSVKQMNELIYLNLRDCTSLESLPKGF-KIKSLKTLILSGCLK 719

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
           LK F  I  S++ L    L+GT+I+ V   IE L  L LLNL +C+ L  LP+ +  LKS
Sbjct: 720 LKDFHIISESIESLH---LEGTAIERVVEHIESLHSLILLNLKNCEKLKYLPNDLYKLKS 776

Query: 664 LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPS 723
           L+ L LSGC  LE++P    ++E LE L + GT++  +                    P 
Sbjct: 777 LQELVLSGCSALESLPPIKEKMECLEILLMDGTSIKQT--------------------PE 816

Query: 724 LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIEL 783
           +S L      NL  C+     +    G       LYL  +   SL     ++SK L I L
Sbjct: 817 MSCLS-----NLKICSFCRPVIDDSTG-------LYLDAHGCGSL----ENVSKPLTIPL 860

Query: 784 EDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLK--LLGNKSL 841
              +R+                   +     D  KL +++   I     LK  LL   S 
Sbjct: 861 V-TERMH------------------TTFIFTDCFKLNQAEKEDIVAQAQLKSQLLARTSR 901

Query: 842 AFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSI 882
             +     L+ +      ++V  PG +IP WF +Q  GS I
Sbjct: 902 HHNHKGLLLDPL------VAVCFPGHDIPSWFSHQKMGSLI 936


>gi|356514941|ref|XP_003526160.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 913

 Score =  353 bits (906), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 254/728 (34%), Positives = 385/728 (52%), Gaps = 61/728 (8%)

Query: 1   MDSRCEKLRFLMDSG--SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE 58
           M+S   KL  L+  G  + DVR++GI GMGG+GK+T+ R +Y+ ISH+F +  ++D+V +
Sbjct: 1   MESHFAKLSKLICPGPVNDDVRVVGITGMGGIGKSTLGRALYERISHQFNSRCYIDDVSK 60

Query: 59  ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
           +    G + +Q++LLSQ L   +  I NV +G  ++  RL   K L+++D+V   KQL  
Sbjct: 61  LYQGYGTLGVQKELLSQSLNEKNLKICNVSNGTLLVWERLSNAKALIILDNVDQDKQLDM 120

Query: 119 LAGNR-----EWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY 173
             G R     +  G GS +II SRD+ +LK HGVD +Y+   LN ++AL LF  KAFK  
Sbjct: 121 FTGGRNDLLGKCLGKGSIVIIISRDQQILKAHGVDVIYRVEPLNDNDALGLFCKKAFKNN 180

Query: 174 QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
             + +  +L++ ++ +  G PLA+EVLGS L G+ V  W S L  L  +    I+D+L+I
Sbjct: 181 YMMSDFKKLTSDVLSHCQGHPLAIEVLGSSLFGKDVSHWGSALVSLREKKSKSIMDVLRI 240

Query: 234 SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLW 293
           SFD L++  K+IFLDIACFF      YV   L+  GF+P  G++VL++K LIT+ +  + 
Sbjct: 241 SFDQLEDTHKEIFLDIACFFNHYPVKYVKEVLDFRGFNPEYGLQVLVDKSLITMDSRWIQ 300

Query: 294 MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
           MH+LL +LG+ IV+ +SP +  K SRLW  ++   V++++   + VE I L         
Sbjct: 301 MHELLCDLGKYIVREKSPRKPWKWSRLWDFKDFLKVMSDNKAADNVEAIFLIEKSDILRT 360

Query: 354 YLCASAKAFSKMT----NLRLLKICNLQL---PNGLEYLSNRLRLLGWRGYPLKFLPSNL 406
                    S M+            N+++      L  LSN L  L W  YP + LP + 
Sbjct: 361 ISTMRVDVLSTMSCLKLLKLDHLDFNVKINFFSGTLVKLSNELGYLRWEKYPFECLPPSF 420

Query: 407 QMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
           + DK +E+ +  S I +LW+G K L  L+ + LS S+NLI+MP    A  LE L LEGC 
Sbjct: 421 EPDKLVELILPKSNIKQLWEGTKPLPNLRRLDLSGSKNLIKMPYIGDALYLESLDLEGCI 480

Query: 467 RLYEIHPSLLLHNKLIILNMKDCTSLITLPG--------KILMKSLEKL----------- 507
           +L EI  S++L  KL  LN+++C SLI LP         K+L+   +KL           
Sbjct: 481 QLEEIGLSIVLSPKLTSLNLRNCKSLIKLPQFGEDLILEKLLLGGCQKLRHIDPSIGLLK 540

Query: 508 -----------NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSEL----HLE 552
                      NL SLP +I GL  L  L++SG  K       + + E L EL     L+
Sbjct: 541 KLRRLNLKNCKNLVSLPNSILGLNSLEDLNLSGCSK-------LYNTELLYELRDAEQLK 593

Query: 553 GTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVR 612
              I G P+  +  S     + ++ +S+  L  +     C+R L LS C+ L + P+ + 
Sbjct: 594 KIDIDGAPIHFQSTSS---YSREHKKSVSCLMPSSPIFPCMRELDLSFCN-LVEIPDAIG 649

Query: 613 SMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC 672
            M  L  L L G +   +P +++ L+KL  L L  CK L  LP     + +   L  +G 
Sbjct: 650 IMCCLQRLDLSGNNFATLP-NLKKLSKLVCLKLQHCKQLKSLPELPSRIYNFDRLRQAGL 708

Query: 673 FKLENVPE 680
           + + N PE
Sbjct: 709 Y-IFNCPE 715



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 215/497 (43%), Gaps = 114/497 (22%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
            LR L LSG   L K P I  ++  L  L L+G   ++E+  SI L  KL  LNL +CK+L
Sbjct: 448  LRRLDLSGSKNLIKMPYIGDALY-LESLDLEGCIQLEEIGLSIVLSPKLTSLNLRNCKSL 506

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQ------------------------IES 687
            ++LP     L  L+ L L GC KL ++  ++G                         + S
Sbjct: 507  IKLPQFGEDL-ILEKLLLGGCQKLRHIDPSIGLLKKLRRLNLKNCKNLVSLPNSILGLNS 565

Query: 688  LEELDISGTAVPHSTSWYSYI--------------PINLM---------RKSVALKLPSL 724
            LE+L++SG +  ++T     +              PI+           +KSV+  +PS 
Sbjct: 566  LEDLNLSGCSKLYNTELLYELRDAEQLKKIDIDGAPIHFQSTSSYSREHKKSVSCLMPSS 625

Query: 725  SGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELE 784
                 +R+L+L+ CNL+E  +P  IG +C L+ L LS N+F +LP ++  LSKL+ ++L+
Sbjct: 626  PIFPCMRELDLSFCNLVE--IPDAIGIMCCLQRLDLSGNNFATLP-NLKKLSKLVCLKLQ 682

Query: 785  DCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFS 844
             CK+L+SLP+LP  I               D L+  ++   +  C + +       +AFS
Sbjct: 683  HCKQLKSLPELPSRIYN------------FDRLR--QAGLYIFNCPELVDRERCTDMAFS 728

Query: 845  MLREYLEAVS-NTRQHLS-VVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
               +  + +      H+S  V PGSEIP WF  ++EG+ +++     +++    +G A C
Sbjct: 729  WTMQSCQVLYIYPFCHVSGGVSPGSEIPRWFNNEHEGNCVSLDACPVMHD-HNWIGVAFC 787

Query: 903  CVFHVLKNSRGNNCFGS----YPTHQLNCHIGHGIYGIGFRDKFGQAG-------SDHLW 951
             +F V   +    CF      YP            +G    D +G          SDH+ 
Sbjct: 788  AIFVVPHETLSAMCFSETERIYPD-----------FGDILVDFYGDVDLELVLDKSDHMC 836

Query: 952  LLYLSRQTC---------YDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVY 1002
            L  + R            Y  RL LE + E             W     EVK  G   +Y
Sbjct: 837  LFLVKRMDFIYHFHLKHKYLGRLVLECDDE-------------WKESYAEVKKYGYRWLY 883

Query: 1003 MDEVEELDQTTNQPSRF 1019
             +++E       + S+F
Sbjct: 884  EEDIEGPSNPLARKSKF 900


>gi|357499331|ref|XP_003619954.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494969|gb|AES76172.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1098

 Score =  352 bits (903), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 245/730 (33%), Positives = 392/730 (53%), Gaps = 64/730 (8%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR ++++ L+D GS D V M+G+ G GG+GK+T+A+ +Y+ ++ +FE   FL NVRE 
Sbjct: 199 LESRVQQVKLLLDKGSKDEVLMVGLYGTGGMGKSTLAKAIYNFVADQFEGVCFLHNVREN 258

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+   L  LQ +LLS+ +++ +  + +V +GI ++  RL RKK+LL++DDV  ++QL++L
Sbjct: 259 SAHNNLKHLQEELLSKTVRV-NIKLGDVSEGIPIIKERLSRKKILLILDDVDKLEQLEAL 317

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG GSR+IIT+RD+HLL  HG++  Y   GL   EAL+L    AF+   P    
Sbjct: 318 AGGLDWFGCGSRVIITTRDKHLLNCHGIEITYAVKGLYGTEALELLRWMAFRDNVP-SGY 376

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            ++ +R + YA GLPL +EV+ S L G+S+++W+STL+  E  P  +I +IL++S+D L+
Sbjct: 377 EEILSRAVSYASGLPLVIEVVASNLFGKSIEKWKSTLDGYEKIPNKKIQEILKVSYDDLE 436

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVI-GIRVLIEKCLITV-------HNNT 291
           E E+ +FLDIACFFKG     V   L     H +   + VL+EK LI +       +N+ 
Sbjct: 437 EEEQSVFLDIACFFKGCRLSEVEETLLAHYGHCIKHHVGVLVEKSLIEINTQSHRSYNDD 496

Query: 292 LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
           + +HDL++++G++IV+++S +E G+RSRLW   ++ HVL + TGT  +E I L+      
Sbjct: 497 VALHDLIEDMGKEIVRQESSKEPGERSRLWCHNDIVHVLQKDTGTSNIEMIYLNC--PSM 554

Query: 352 EVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           E  +  + K F KMTNL+ L I N +   G ++L + LR L W+G P K L S       
Sbjct: 555 ETIIDWNGKPFRKMTNLKTLIIENGRFSKGPKHLPSSLRFLKWKGCPSKSLSS------- 607

Query: 412 IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
                C S         K  + +K M L   E L  +P+ +G  NLEK     C  L  I
Sbjct: 608 -----CISN--------KEFNNMKFMTLDDCEYLTHIPNVSGLSNLEKFSFRNCANLITI 654

Query: 472 HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLPTTISGLKCLSTL 525
           H S+   NKL IL+   C  +++ P  + + SL++       +LK  P  +  +  +  +
Sbjct: 655 HNSVGYLNKLEILDAYGCRKIVSFP-PLRLPSLKEFQLSWCKSLKKFPELLCKMSNIREI 713

Query: 526 DVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLP-----LSIELLSGLVLLNLKNCR-S 579
            +   L   EFP   +++  LS+L +    +   P     L   + S + +L+L N   S
Sbjct: 714 QLIECLDVEEFPFPFQNLSELSDLVINRCEMLRFPRHDDKLDFIVFSNVQMLDLNNSNLS 773

Query: 580 LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG----TSIKEVPSSIE 635
            + LP+ +     ++ L LS  +  K  PE +     L  L+LD       I+ +P ++E
Sbjct: 774 DDCLPILLKWCVNVKYLNLSK-NNFKILPECLSECHLLKHLYLDKCQYLEEIRGIPQNLE 832

Query: 636 LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
            L         D  N   L SS   +   + L+ +GC +    P    +I    E  I G
Sbjct: 833 HL---------DAVNCYSLTSSCRRMLLSQKLHEAGCTRY-YFPTGAERIPDWFEHQIRG 882

Query: 696 TAVPHSTSWY 705
             V   + W+
Sbjct: 883 QTV---SFWF 889



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 144/336 (42%), Gaps = 54/336 (16%)

Query: 565 LLSGLVLLNLKNCRSLEILPVTVSN--LKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-F 621
           L S L  L  K C S + L   +SN     ++ + L  C  L   P  V  + +L +  F
Sbjct: 588 LPSSLRFLKWKGCPS-KSLSSCISNKEFNNMKFMTLDDCEYLTHIPN-VSGLSNLEKFSF 645

Query: 622 LDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPET 681
            +  ++  + +S+  L KLE+L+   C+ +V  P   + L SLK   LS C  L+  PE 
Sbjct: 646 RNCANLITIHNSVGYLNKLEILDAYGCRKIVSFPP--LRLPSLKEFQLSWCKSLKKFPEL 703

Query: 682 LGQIESLEE------LDISGTAVP-HSTSWYSYIPINLMRKSVALKLPSLSG------LC 728
           L ++ ++ E      LD+     P  + S  S + IN   +   L+ P            
Sbjct: 704 LCKMSNIREIQLIECLDVEEFPFPFQNLSELSDLVIN---RCEMLRFPRHDDKLDFIVFS 760

Query: 729 SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKR 788
           +++ L+L + NL +  LP  +    ++K L LSKN+F  LP  ++    L ++ L+ C+ 
Sbjct: 761 NVQMLDLNNSNLSDDCLPILLKWCVNVKYLNLSKNNFKILPECLSECHLLKHLYLDKCQY 820

Query: 789 LQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLRE 848
           L+ +  +P N+  +    C SL +                           S    +L +
Sbjct: 821 LEEIRGIPQNLEHLDAVNCYSLTS---------------------------SCRRMLLSQ 853

Query: 849 YLEAVSNTRQHLSVVVPGSE-IPEWFMYQNEGSSIT 883
            L     TR +      G+E IP+WF +Q  G +++
Sbjct: 854 KLHEAGCTRYYFPT---GAERIPDWFEHQIRGQTVS 886


>gi|357456937|ref|XP_003598749.1| Resistance protein [Medicago truncatula]
 gi|355487797|gb|AES69000.1| Resistance protein [Medicago truncatula]
          Length = 1075

 Score =  352 bits (903), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 224/587 (38%), Positives = 348/587 (59%), Gaps = 30/587 (5%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
           V M+GI G+GG+GK+TIAR +++L + +FE   FL ++RE ++   L  LQ  LLS++  
Sbjct: 241 VNMVGIYGIGGIGKSTIARALHNLSADQFEGVCFLGDIRERATNHDLAQLQETLLSEVFG 300

Query: 79  LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
                + +V+ G+ M+ +RL+RKKVLL++D+V  V+QL++L G  +WFG GS+IIIT+RD
Sbjct: 301 EKGIKVGDVYKGMSMIKARLKRKKVLLILDNVDKVQQLRALVGAPDWFGFGSKIIITTRD 360

Query: 139 EHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALE 198
           +HLL THG+ +VY+   L  ++AL+LF+  AFK  +     V ++ R + Y  GLPLALE
Sbjct: 361 KHLLATHGIVKVYEVRQLKDEKALELFSWHAFKDKKNYPGYVDIAKRAVSYCEGLPLALE 420

Query: 199 VLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDR 258
           V+GS L G+S+   +S+L++ E   P +I  IL+IS+D L+E EK IFLDIACFF  ++ 
Sbjct: 421 VIGSQLFGKSLVVCKSSLDKYERVLPKDIHAILKISYDDLEEDEKGIFLDIACFFNSSEI 480

Query: 259 DYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWMHDLLQELGQQIVQRQSPEELGKR 317
            YV   L   GFH   GI+ L +K L+ +  N  + MHDL+Q++G++IV+++S  E G+R
Sbjct: 481 GYVKEILYLHGFHAEDGIQQLTDKSLMKIDTNGCVRMHDLIQDMGREIVRQESTLEPGRR 540

Query: 318 SRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQ 377
           SRLW  +++ HVL E+ GT+ +E I+ D +    +V  C   KAF +M NL++L I N Q
Sbjct: 541 SRLWFSDDIVHVLEENKGTDTIEVIIAD-FCEARKVKWC--GKAFGQMKNLKILIIGNAQ 597

Query: 378 LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM---CYSRIGELWKGIKHLDKL 434
                + L + LRLL W GY    LPS+      I + +   C  R+    + +K  + L
Sbjct: 598 FSRDPQVLPSSLRLLDWHGYQSSSLPSDFNPKNLIILNLAESCLKRV----ESLKVFETL 653

Query: 435 KVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLIT 494
             +     + L  +P  +  PNL  L L+ CT L+ IH S+    KL++L+ + CT L  
Sbjct: 654 IFLDFQDCKFLTEIPSLSRVPNLGSLCLDYCTNLFRIHESVGFLAKLVLLSAQGCTQLDR 713

Query: 495 LPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT 554
           L   + + SLE                  TLD+ G  +   FPE++  ME++ +++L+ T
Sbjct: 714 LVPCMNLPSLE------------------TLDLRGCSRLESFPEVLGVMENIKDVYLDET 755

Query: 555 AIRGLPLSIELLSGLVLLNLKNC-RSLEILPVTVSNLKCLRSLKLSG 600
            +  LP +I  L GL  L L+ C R+++I    +   + + S K+SG
Sbjct: 756 NLYELPFTIGNLVGLQSLFLRRCKRTIQIPSYVLPKSEIVISNKVSG 802



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 12/173 (6%)

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL-KNC-RSLEILP 584
           + G+ +F   P+++     L + H  G     LP        L++LNL ++C + +E L 
Sbjct: 592 IIGNAQFSRDPQVLPSSLRLLDWH--GYQSSSLPSDFNP-KNLIILNLAESCLKRVESLK 648

Query: 585 VTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELL 643
           V     + L  L    C  L + P + R + +L  L LD  T++  +  S+  L KL LL
Sbjct: 649 V----FETLIFLDFQDCKFLTEIPSLSR-VPNLGSLCLDYCTNLFRIHESVGFLAKLVLL 703

Query: 644 NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
           +   C  L RL   +  L SL+TL+L GC +LE+ PE LG +E+++++ +  T
Sbjct: 704 SAQGCTQLDRLVPCM-NLPSLETLDLRGCSRLESFPEVLGVMENIKDVYLDET 755



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 22/179 (12%)

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
           K+L  L L  + +K V  S+++   L  L+  DCK L  +PS +  + +L +L L  C  
Sbjct: 629 KNLIILNLAESCLKRV-ESLKVFETLIFLDFQDCKFLTEIPS-LSRVPNLGSLCLDYCTN 686

Query: 675 LENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLN 734
           L  + E++G +  L  L   G                L R    + LPSL        L+
Sbjct: 687 LFRIHESVGFLAKLVLLSAQGCT-------------QLDRLVPCMNLPSL------ETLD 727

Query: 735 LTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
           L  C+ +E + P  +G + ++K++YL + +   LP +I +L  L ++ L  CKR   +P
Sbjct: 728 LRGCSRLE-SFPEVLGVMENIKDVYLDETNLYELPFTIGNLVGLQSLFLRRCKRTIQIP 785


>gi|357514797|ref|XP_003627687.1| NBS resistance protein [Medicago truncatula]
 gi|355521709|gb|AET02163.1| NBS resistance protein [Medicago truncatula]
          Length = 795

 Score =  352 bits (902), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 222/565 (39%), Positives = 324/565 (57%), Gaps = 24/565 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D     ++ L+   SS+V++IG+ GMGG GKTT+A  ++  +S  +E   FL+NV E S
Sbjct: 195 LDENYWSIKSLIKIDSSEVQIIGVWGMGGTGKTTLAAAMFQRVSSHYEGHCFLENVTEQS 254

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            K G+     +LLS+LL   D  I  +     M+  RL+R K  +V+DDV   + LQ+L 
Sbjct: 255 EKHGINDTCNKLLSKLLG-EDLDITTLKVIPSMIRRRLKRMKSFIVLDDVHTSELLQNLI 313

Query: 121 G-NREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           G    W G+GS +I+T+RD+H+L + G++E+Y+   +N   +LQLF + AF T  P +  
Sbjct: 314 GVGHGWLGAGSTVIVTTRDKHVLISGGIEEIYEVKKMNSQNSLQLFCLNAFDTVFPKEGF 373

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V+LS R I YA G+PLAL+VLGS L  +S  EW   L +LE    +EI  IL+ S++ L 
Sbjct: 374 VELSKRAIDYAKGIPLALKVLGSSLRCKSEIEWNCALSKLEKISNAEIDRILRWSYNELD 433

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLL 298
           + EK IFLDIACFFKG +R+ VT  L  CGF   IGI  L++K LI V + N + MHDL+
Sbjct: 434 DKEKNIFLDIACFFKGRERNSVTKILNDCGFFADIGISHLLDKALIRVDYKNFIQMHDLI 493

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD--NYHHENEVYLC 356
           QE+G+QIV+ +S +  G+RSRL   +EV  VL  + G+E++E I LD   Y H N     
Sbjct: 494 QEMGRQIVREESLKNPGQRSRLCDPKEVFDVLKNNRGSEIIEAIFLDATEYTHIN----- 548

Query: 357 ASAKAFSKMTNLRLLK------ICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK 410
            + KAF KM NLRLL       + ++ LP+GL+ L   LR   W GYP K LP     + 
Sbjct: 549 LNPKAFEKMVNLRLLAFRDHKGVKSVSLPHGLDSLPETLRYFLWDGYPWKSLPPTFCAEM 608

Query: 411 TIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYE 470
            +E+ M  S + +LW G+  +  L+V+ L  S  LI  P+ +G+PNL+ + LE C  + E
Sbjct: 609 LVELSMQESHVEKLWNGVLDMPNLEVLDLGRSRKLIECPNVSGSPNLKYVTLEDCESMPE 668

Query: 471 IHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLPTTISGLKCLST 524
           +  S+ L  KL  L++  CTSL +L       +  +L      NLK +  T + +  L  
Sbjct: 669 VDSSIFLLQKLERLSVLGCTSLKSLSSNTCSPAFRELNAMFCDNLKDISVTFASVDGLVL 728

Query: 525 LDVSGDLKFREFPEIVEHMEHLSEL 549
                D    E P  + H ++L+ L
Sbjct: 729 FLTEWD--GNELPSSILHKKNLTRL 751


>gi|358348505|ref|XP_003638286.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355504221|gb|AES85424.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1074

 Score =  351 bits (901), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 225/593 (37%), Positives = 336/593 (56%), Gaps = 64/593 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D+  +++   + + SS V +IGI GMGG GKTT A   Y+    +F    F++N+RE+ 
Sbjct: 196 LDTHVQQIIAFIKNQSSKVCLIGIWGMGGSGKTTTATAFYNQFHGKFVVHRFIENIREVC 255

Query: 61  SKGGL--VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            K G   + L++QLL               D +  +  R  R+K L+V+DDV  ++Q+ +
Sbjct: 256 EKEGRGNIHLKQQLL--------------LDNMKTIEKRFMREKALVVLDDVSALEQVNA 301

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G  + FG+GS +I+TSRD  +LK   VD VY    ++  E+L+LFN+ AF+     ++
Sbjct: 302 LCGKHKCFGTGSVLIVTSRDVRILKLLEVDHVYSMTEMDEYESLELFNLHAFRKSSAKED 361

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             QLS  II Y GGLPLALE +GS+L  R+  +W+STL  L   P  ++   L+IS+DGL
Sbjct: 362 FNQLSRSIIDYCGGLPLALEEIGSYLFDRTKQQWKSTLSNLRRIPNDKVQKKLKISYDGL 421

Query: 239 Q-ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHD 296
             + E+ IFLDI CFF G  R YV+  L+GCG +  +GI +LIE+ L+ V  N+ L MH 
Sbjct: 422 DCDSERGIFLDICCFFIGKKRAYVSEILDGCGLNADMGITILIERSLLKVEKNDKLGMHG 481

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL+++G++IV ++S EELGKRSRLW +E+V  VL ++ GT+ VEG+VL +   EN  +  
Sbjct: 482 LLRDMGREIVCKRSEEELGKRSRLWSDEDVHDVLNQNCGTKFVEGLVLKSQSTENVSF-- 539

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            +A +F KM NLRLL++ ++ L                      F   NL +       +
Sbjct: 540 -NADSFKKMNNLRLLQLDHVDLTG-------------------DFYQENLAV-----FEL 574

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
            +S I  +W   K ++KLK++ LSHS++L   PDF+  PNLEKLI++ C  L ++H S+ 
Sbjct: 575 KHSNIKLVWNETKLMNKLKILNLSHSKHLTSTPDFSKLPNLEKLIMKNCPNLSKLHHSIG 634

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
               +++LN+KDCTS                 L SLP  I  LK L TL  SG  K  + 
Sbjct: 635 DLKNILLLNLKDCTS-----------------LASLPEVIYQLKSLKTLIFSGCSKIDKL 677

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCR--SLEILPVTV 587
            E +  ME L+ L  + T ++ +P SI  L G+  ++L  C   S E+LP  +
Sbjct: 678 EEDIVQMESLTTLIAKDTGVKEMPYSILGLKGIAYISLCGCEGLSFEVLPSVI 730



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 84/184 (45%), Gaps = 43/184 (23%)

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
           L NKL ILN+     L + P    + +LEKL +K+ P                       
Sbjct: 588 LMNKLKILNLSHSKHLTSTPDFSKLPNLEKLIMKNCP----------------------- 624

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
                   +LS+LH           SI  L  ++LLNLK+C SL  LP  +  LK L++L
Sbjct: 625 --------NLSKLHH----------SIGDLKNILLLNLKDCTSLASLPEVIYQLKSLKTL 666

Query: 597 KLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV--RL 654
             SGCSK+ K  E +  M+ L+ L    T +KE+P SI  L  +  ++L  C+ L    L
Sbjct: 667 IFSGCSKIDKLEEDIVQMESLTTLIAKDTGVKEMPYSILGLKGIAYISLCGCEGLSFEVL 726

Query: 655 PSSI 658
           PS I
Sbjct: 727 PSVI 730



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 98/403 (24%), Positives = 150/403 (37%), Gaps = 105/403 (26%)

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
           L  +D++GD           + E+L+   L+ + I+ +    +L++ L +LNL + + L 
Sbjct: 555 LDHVDLTGDF----------YQENLAVFELKHSNIKLVWNETKLMNKLKILNLSHSKHLT 604

Query: 582 ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLE 641
             P   S L  L  L +  C  L K                          SI  L  + 
Sbjct: 605 STP-DFSKLPNLEKLIMKNCPNLSKLHH-----------------------SIGDLKNIL 640

Query: 642 LLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHS 701
           LLNL DC +L  LP  I  LKSLKTL  SGC K++ + E + Q+ESL  L    T V   
Sbjct: 641 LLNLKDCTSLASLPEVIYQLKSLKTLIFSGCSKIDKLEEDIVQMESLTTLIAKDTGVKE- 699

Query: 702 TSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLS 761
                 +P +++            GL  +  ++L  C   EG                  
Sbjct: 700 ------MPYSIL------------GLKGIAYISLCGC---EGL----------------- 721

Query: 762 KNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCK 821
             SF  LP+ I                + S P++ P   Q  V+               +
Sbjct: 722 --SFEVLPSVIWSCVP---------PTMNSSPRISPFDNQYDVD-------------FTE 757

Query: 822 SDSTMIACLDSLKLL---GNKSLAFSMLREYLEA--VSNTRQHLSVVVPGSEIPEWFMYQ 876
           S+++ I+ L    LL   G+  +   +L   +     SN   H S+ V G   P W  Y+
Sbjct: 758 SETSQISNLPLRPLLIGIGSCHIVIDILSRSISQGLTSNDSGHFSLPV-GDNYPSWLAYR 816

Query: 877 NEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGS 919
            +G S     P N+     L G  +C V+     + G  C  S
Sbjct: 817 CDGPSTQFHVPENI--DCHLKGIILCVVYSSAPENMGAECLIS 857


>gi|30694675|ref|NP_851133.1| putative WRKY transcription factor 16 [Arabidopsis thaliana]
 gi|29839627|sp|Q9FL92.1|WRK16_ARATH RecName: Full=Probable WRKY transcription factor 16; AltName:
           Full=WRKY DNA-binding protein 16
 gi|10177497|dbj|BAB10888.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007811|gb|AED95194.1| putative WRKY transcription factor 16 [Arabidopsis thaliana]
          Length = 1372

 Score =  351 bits (901), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 248/692 (35%), Positives = 367/692 (53%), Gaps = 64/692 (9%)

Query: 18  DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFL-DNVREISSKGGLVSLQRQLLSQL 76
           D+R +GI GM G+GKTT+A+ V+D +S EF+A  F+ D  + I  KG    L+ Q L + 
Sbjct: 162 DIRCVGIWGMPGIGKTTLAKAVFDQMSGEFDAHCFIEDYTKAIQEKGVYCLLEEQFLKE- 220

Query: 77  LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITS 136
               +         + +L  RL  K+VL+V+DDV     ++S  G  +WFG  S IIITS
Sbjct: 221 ----NAGASGTVTKLSLLRDRLNNKRVLVVLDDVRSPLVVESFLGGFDWFGPKSLIIITS 276

Query: 137 RDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLA 196
           +D+ + +   V+++Y+  GLN  EALQLF++ A       Q   ++S ++I+YA G PLA
Sbjct: 277 KDKSVFRLCRVNQIYEVQGLNEKEALQLFSLCASIDDMAEQNLHEVSMKVIKYANGHPLA 336

Query: 197 LEVLGSFLSGRS-VDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKG 255
           L + G  L G+    E      +L+  PP+  +D ++ S+D L + EK IFLDIACFF+G
Sbjct: 337 LNLYGRELMGKKRPPEMEIAFLKLKECPPAIFVDAIKSSYDTLNDREKNIFLDIACFFQG 396

Query: 256 NDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELG 315
            + DYV   LEGCGF P +GI VL+EK L+T+  N + MH+L+Q++G+QI+ R++  +  
Sbjct: 397 ENVDYVMQLLEGCGFFPHVGIDVLVEKSLVTISENRVRMHNLIQDVGRQIINRET-RQTK 455

Query: 316 KRSRLW---------------KEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +RSRLW               + EE       +   E +EG+ LD  +   ++       
Sbjct: 456 RRSRLWEPCSIKYLLEDKEQNENEEQKTTFERAQVPEEIEGMFLDTSNLSFDI----KHV 511

Query: 361 AFSKMTNLRLLKI---------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           AF  M NLRL KI          N  L   L  L N LRLL W  YPL+FLP N      
Sbjct: 512 AFDNMLNLRLFKIYSSNPEVHHVNNFLKGSLSSLPNVLRLLHWENYPLQFLPQNFDPIHL 571

Query: 412 IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
           +EI M YS++ +LW G K L+ LK + L HS+ L+ + D   A NLE + L+GCTRL   
Sbjct: 572 VEINMPYSQLKKLWGGTKDLEMLKTIRLCHSQQLVDIDDLLKAQNLEVVDLQGCTRLQSF 631

Query: 472 HPS-LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK-----SLPTTISGLKCLSTL 525
             +  LLH  L ++N+  CT + + P   +  ++E LNL+      LP +I        L
Sbjct: 632 PATGQLLH--LRVVNLSGCTEIKSFPE--IPPNIETLNLQGTGIIELPLSIVKPNYRELL 687

Query: 526 DVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
           ++       E P +   + +L +  L+  T++  +  S +    L  L L +C  L  LP
Sbjct: 688 NL-----LAEIPGL-SGVSNLEQSDLKPLTSLMKISTSYQNPGKLSCLELNDCSRLRSLP 741

Query: 585 VTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLN 644
             V NL+ L++L LSGCS+L+      R++K   EL+L GT++++VP   +L   LE  N
Sbjct: 742 NMV-NLELLKALDLSGCSELETIQGFPRNLK---ELYLVGTAVRQVP---QLPQSLEFFN 794

Query: 645 LSDCKNLVRLPSSIIALKSLKT-LNLSGCFKL 675
              C   V L S  +  K L      S CF L
Sbjct: 795 AHGC---VSLKSIRLDFKKLPVHYTFSNCFDL 823



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 90/182 (49%), Gaps = 43/182 (23%)

Query: 640 LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP 699
           LE+++L  C  L   P++   L  L+ +NLSGC ++++ PE    IE+L   ++ GT + 
Sbjct: 617 LEVVDLQGCTRLQSFPATG-QLLHLRVVNLSGCTEIKSFPEIPPNIETL---NLQGTGII 672

Query: 700 HSTSWYSYIPINLMRKS------VALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLC 753
                   +P+++++ +      +  ++P LSG+ +L +              SD+  L 
Sbjct: 673 E-------LPLSIVKPNYRELLNLLAEIPGLSGVSNLEQ--------------SDLKPLT 711

Query: 754 SLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP--PNIRQVRVNGCASLV 811
           SL          + + TS  +  KL  +EL DC RL+SLP +     ++ + ++GC+ L 
Sbjct: 712 SL----------MKISTSYQNPGKLSCLELNDCSRLRSLPNMVNLELLKALDLSGCSELE 761

Query: 812 TL 813
           T+
Sbjct: 762 TI 763



 Score = 43.9 bits (102), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 2/84 (2%)

Query: 229  DILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITV 287
            ++L++ + GLQE+ K +FL IA  F   D   V   +          G++VL  + LI V
Sbjct: 1049 EVLRVRYAGLQEIYKALFLYIAGLFNDEDVGLVAPLIANIIDMDVSYGLKVLAYRSLIRV 1108

Query: 288  HNN-TLWMHDLLQELGQQIVQRQS 310
             +N  + MH LL+++G++I+  +S
Sbjct: 1109 SSNGEIVMHYLLRQMGKEILHTES 1132


>gi|297840621|ref|XP_002888192.1| hypothetical protein ARALYDRAFT_893604 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334033|gb|EFH64451.1| hypothetical protein ARALYDRAFT_893604 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 760

 Score =  351 bits (901), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 228/605 (37%), Positives = 334/605 (55%), Gaps = 41/605 (6%)

Query: 8   LRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVS 67
           L  L  S  SD  ++GI GM G+GKT+IAR ++ +++ +++   FL +        GL  
Sbjct: 177 LALLNQSHPSDAEIVGIWGMAGIGKTSIAREIFGILAPQYDMCYFLQDFDLTCQTKGLRQ 236

Query: 68  LQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFG 127
           ++  L S++      SI         +    Q K +LLV+DDV + +  +++ G   WF 
Sbjct: 237 MRDDLFSKIFGEEKLSIGASDIKTSFMRDWFQEKTILLVLDDVSNARDAEAVVGGFCWFS 296

Query: 128 SGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARII 187
            G RII+TSR + +L    V E Y+   L   E+ +L      K Y   +  V   + ++
Sbjct: 297 HGHRIILTSRRKQVLVQCRVKEPYEIQKLCEFESSRLC-----KQYLNGENVV--ISELM 349

Query: 188 RYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFL 247
             + G+PLAL VLGS +S +     +  L+ L   PP++I D  Q SF GL E EK IFL
Sbjct: 350 SCSSGIPLALNVLGSSVSKQHRSNMKEHLQSLRRNPPTQIQDEFQKSFGGLDENEKNIFL 409

Query: 248 DIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQ 307
           D+ACFF G ++D+V   L+ CGF   +GI  LI++ LI+V ++ + M    Q++G+ IV 
Sbjct: 410 DLACFFTGENKDHVVQLLDACGFLTYLGICDLIDESLISVVDDKIEMPVPFQDIGRFIVH 469

Query: 308 RQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTN 367
            +  E+  +RSRLW  +++ +VLT ++GTE +EGI LD      E+    S   FSKM  
Sbjct: 470 EEG-EDPCERSRLWDSKDIANVLTRNSGTEAIEGIFLDASDLNYEL----SPTMFSKMYR 524

Query: 368 LRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           LRLLK+        C L L  GL  L + LRLL W  YPL+ LP     +  +E+ M YS
Sbjct: 525 LRLLKLYFSTPGNQCKLSLSQGLYTLPDELRLLHWENYPLECLPQKFNPENLVEVNMPYS 584

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
            + +LW+G K+L+KLK + LSHS NL  +   + A NLE + LEGC  L ++  S+    
Sbjct: 585 NMEKLWEGKKNLEKLKRIKLSHSRNLTDVMVLSEALNLEHIDLEGCISLVDVSTSIPSCG 644

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
           KL+ LN+KDC+ L +LP                   + GL  L  L +SG     EF EI
Sbjct: 645 KLVSLNLKDCSQLQSLPA------------------MFGLISLKLLRMSG---CSEFEEI 683

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
            +   +L EL+L GTAI+ LPLSIE L+ L+ L+L+NC  L+ LP  +SNL+ +  LKLS
Sbjct: 684 QDFAPNLKELYLAGTAIKELPLSIENLTELITLDLENCTRLQKLPNGISNLRSMVELKLS 743

Query: 600 GCSKL 604
           GC+ L
Sbjct: 744 GCTSL 748



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/133 (42%), Positives = 80/133 (60%), Gaps = 5/133 (3%)

Query: 545 HLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           +L  + LEG  ++  +  SI     LV LNLK+C  L+ LP     L  L+ L++SGCS+
Sbjct: 621 NLEHIDLEGCISLVDVSTSIPSCGKLVSLNLKDCSQLQSLPAMFG-LISLKLLRMSGCSE 679

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
              F EI     +L EL+L GT+IKE+P SIE LT+L  L+L +C  L +LP+ I  L+S
Sbjct: 680 ---FEEIQDFAPNLKELYLAGTAIKELPLSIENLTELITLDLENCTRLQKLPNGISNLRS 736

Query: 664 LKTLNLSGCFKLE 676
           +  L LSGC  L+
Sbjct: 737 MVELKLSGCTSLD 749



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 94/170 (55%), Gaps = 15/170 (8%)

Query: 650 NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG--TAVPHSTSWYS- 706
           N+ +L      L+ LK + LS    L +V   L +  +LE +D+ G  + V  STS  S 
Sbjct: 585 NMEKLWEGKKNLEKLKRIKLSHSRNLTDVM-VLSEALNLEHIDLEGCISLVDVSTSIPSC 643

Query: 707 --YIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLC-SLKELYLSKN 763
              + +NL   S    LP++ GL SL+ L ++ C+  E     +I +   +LKELYL+  
Sbjct: 644 GKLVSLNLKDCSQLQSLPAMFGLISLKLLRMSGCSEFE-----EIQDFAPNLKELYLAGT 698

Query: 764 SFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIR---QVRVNGCASL 810
           +   LP SI +L++L+ ++LE+C RLQ LP    N+R   +++++GC SL
Sbjct: 699 AIKELPLSIENLTELITLDLENCTRLQKLPNGISNLRSMVELKLSGCTSL 748


>gi|297740985|emb|CBI31297.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score =  351 bits (901), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 207/474 (43%), Positives = 306/474 (64%), Gaps = 13/474 (2%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD   ++L+ L+ +   DV M+GI G+GG+GKTTIA   Y+ IS  F+ S FL  V E  
Sbjct: 191 MDFHLKQLKSLVKTELDDVHMVGIYGIGGIGKTTIAMAFYNDISSRFDGSSFLRGVGE-K 249

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           SKGGL+ LQ++L   +LK       +  +GI+ +  RL  K+VL+V+DDV +++QL++LA
Sbjct: 250 SKGGLLELQKKLFKDILKCESTDFDDTSEGINGIKKRLCSKRVLIVLDDVEELEQLENLA 309

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY--QPLQE 178
           G   W+G+ S IIIT++D  LL  HGV+ +Y+   LN+ EA+ LFN  AFK    +P ++
Sbjct: 310 GKNGWYGAKSTIIITTKDTSLLSQHGVNILYEVKELNHKEAIDLFNWWAFKQNIPKPKED 369

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
              LS  ++ YA GLP+AL+VLG FL G+ +DEW+S L +LE  P  ++  +L++S++ L
Sbjct: 370 FESLSHCVVGYAKGLPIALKVLGGFLFGKKIDEWKSALHKLEKIPHMKVQSVLKVSYERL 429

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
            + EK+IFLDIACFFKG D+D V+  L   G +  IGI+VL E+CLIT+  N L MHDLL
Sbjct: 430 DDTEKEIFLDIACFFKGKDKDLVSRIL---GRYADIGIKVLHERCLITISQNKLDMHDLL 486

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           Q++GQ+IV+++  +E GKRSRLW   +V  +LT +TGTE +EG+ ++     N++    S
Sbjct: 487 QQMGQEIVRQECLKEPGKRSRLWDSNDVDSMLTRNTGTEAIEGLFVE-IPTSNKMQF--S 543

Query: 359 AKAFSKMTNLRLLKICNLQLPN----GLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
             +F+KM  LRL  + N +  N      E+ S++LR L + G  L+ LP+N      +E+
Sbjct: 544 TNSFTKMNRLRLFIVYNKRYWNCFKGDFEFPSSQLRYLNFYGCSLESLPTNFNGRNLVEL 603

Query: 415 YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
            +  S I +LWKG +  + LKV+ L +S+ L+ +PDF+  PNLE L LEGC  L
Sbjct: 604 DLVRSGIKKLWKGDEIFNSLKVINLGYSKYLVEIPDFSSVPNLEILNLEGCINL 657


>gi|237769811|dbj|BAH59424.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 1373

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 259/710 (36%), Positives = 388/710 (54%), Gaps = 67/710 (9%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
           +R +GI GM G+GKTT+A+ V+D +S  F+AS F+++  +   + GL  L   L  QLL 
Sbjct: 172 IRCVGIWGMPGIGKTTLAKAVFDQMSSAFDASCFIEDYDKSIHEKGLYCL---LEEQLLP 228

Query: 79  LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
             D +I      +  L  RL  K+VL+V+DDV +    +S     +W G GS IIITSRD
Sbjct: 229 GNDATIMK----LSSLRDRLNSKRVLVVLDDVRNALVGESFLEGFDWLGPGSLIIITSRD 284

Query: 139 EHLLKTHGVDEVYKPHGLNYDEALQLFNMKA-FKTYQPLQECVQLSARIIRYAGGLPLAL 197
           + +    G++++Y+  GLN  EA QLF + A  K     Q   +LS R+I YA G PLA+
Sbjct: 285 KQVFCLCGINQIYEVQGLNEKEARQLFLLSASIKEDMGEQNLQELSVRVINYANGNPLAI 344

Query: 198 EVLGSFLSGRS-VDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGN 256
            V G  L G+  + E  +   +L+  PP +I+D  + ++D L + EK IFLDIACFF+G 
Sbjct: 345 NVYGRELKGKKKLSEMETAFLKLKRRPPFKIVDAFKSTYDTLSDNEKNIFLDIACFFQGE 404

Query: 257 DRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGK 316
           + +YV   LEGCGF P + I VL++KCL+T+  N +W+H L Q++G++I+  ++  ++ +
Sbjct: 405 NVNYVIQLLEGCGFFPHVEIDVLVDKCLVTISENRVWLHKLTQDIGREIINGETV-QIER 463

Query: 317 RSRLWKEEEVCHVL---------------TESTGTELVEGIVLDNYHHENEVYLCASAKA 361
           R RLW+   + ++L                 + G+E +EG+ LD     + +       A
Sbjct: 464 RRRLWEPWSIKYLLEYNEHKANGEPKTTFKRAQGSEEIEGLFLDT----SNLRFDLQPSA 519

Query: 362 FSKMTNLRLLKI-CN-------LQLPNG-LEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
           F  M NLRLLKI C+       +  P G L  L N LRLL W  YPLK LP N      +
Sbjct: 520 FKNMLNLRLLKIYCSNPEVHPVINFPTGSLHSLPNELRLLHWENYPLKSLPQNFDPRHLV 579

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
           EI M YS++ +LW G K+L+ L+ + L HS +L+ + D   A NLE + L+GCTRL    
Sbjct: 580 EINMPYSQLQKLWGGTKNLEMLRTIRLCHSHHLVDIDDLLKAENLEVIDLQGCTRLQNFP 639

Query: 473 PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL--NLKSLPTTISGLKCLSTLDVSGD 530
            +  L      L ++D    + L G I +KS+ ++  N++ L    +G+  L    V  +
Sbjct: 640 AAGRL------LRLRD----VNLSGCIKIKSVLEIPPNIEKLHLQGTGILALPVSTVKPN 689

Query: 531 LKFREFPEIVEHMEHLSEL-HLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS 588
              RE    +  +  LSE   LE  T++     S + L  L+ L LK+C  L+ LP  ++
Sbjct: 690 --HRELVNFLTEIPGLSEASKLERLTSLLESNSSCQDLGKLICLELKDCSCLQSLP-NMA 746

Query: 589 NLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDC 648
           NL  L  L LSGCS L       R +K   +L+L GT+I+EVP   +L   LE+LN +  
Sbjct: 747 NLD-LNVLDLSGCSSLNSIQGFPRFLK---QLYLGGTAIREVP---QLPQSLEILN-AHG 798

Query: 649 KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
             L  LP ++  L+ LK L+LSGC +LE +    G   +L+EL  +GT +
Sbjct: 799 SCLRSLP-NMANLEFLKVLDLSGCSELETIQ---GFPRNLKELYFAGTTL 844



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 52/83 (62%), Gaps = 1/83 (1%)

Query: 229  DILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH 288
            ++L++S+D LQE++K +FL IA  F   D D+V   + G       G++VL +  LI+V 
Sbjct: 1087 EVLRVSYDDLQEMDKVLFLYIASLFNDEDVDFVAPLIAGIDLDVSSGLKVLADVSLISVS 1146

Query: 289  NN-TLWMHDLLQELGQQIVQRQS 310
            +N  + MH L +++G++I+  QS
Sbjct: 1147 SNGEIVMHSLQRQMGKEILHGQS 1169



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 111/266 (41%), Gaps = 61/266 (22%)

Query: 549 LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
           LH E   ++ LP + +    LV +N+   + L+ L     NL+ LR+++L     L    
Sbjct: 559 LHWENYPLKSLPQNFDP-RHLVEINMPYSQ-LQKLWGGTKNLEMLRTIRLCHSHHLVDID 616

Query: 609 EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
           +++++                          LE+++L  C  L   P++   L+ L+ +N
Sbjct: 617 DLLKA------------------------ENLEVIDLQGCTRLQNFPAAGRLLR-LRDVN 651

Query: 669 LSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLC 728
           LSGC K+++V E    IE L        A+P ST      P +    +   ++P LS   
Sbjct: 652 LSGCIKIKSVLEIPPNIEKLHLQGTGILALPVST----VKPNHRELVNFLTEIPGLSEAS 707

Query: 729 SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKR 788
            L +L                              S +   +S   L KL+ +EL+DC  
Sbjct: 708 KLERLT-----------------------------SLLESNSSCQDLGKLICLELKDCSC 738

Query: 789 LQSLPQLPP-NIRQVRVNGCASLVTL 813
           LQSLP +   ++  + ++GC+SL ++
Sbjct: 739 LQSLPNMANLDLNVLDLSGCSSLNSI 764


>gi|357499511|ref|XP_003620044.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495059|gb|AES76262.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1301

 Score =  351 bits (900), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 221/585 (37%), Positives = 336/585 (57%), Gaps = 51/585 (8%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + SR ++++ L+D  S D V M+G+ G GGLGK+T+A+ +Y+ I+ +FE S FL+NVRE 
Sbjct: 202 LQSRVQQVKSLLDERSDDGVHMVGLYGTGGLGKSTLAKAIYNFIADQFECSCFLENVREN 261

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+   L  LQ +LL + L+L +  +  V +GI  +  RL   K+LL++DDV D+ QLQ+L
Sbjct: 262 SASNKLKHLQEELLLKTLQL-EIKLGGVSEGISHIKERLHSMKILLILDDVDDMGQLQAL 320

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG GSR+IIT+RD HLL +H ++  Y   GL   EAL+L    AFK  +     
Sbjct: 321 AGEPDWFGLGSRVIITTRDRHLLTSHDIERKYALEGLCRTEALELLRWMAFKNNKVPSVY 380

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R + YA GLPL LEV+GS L G+ ++EW+ TLE  E  P  +I +IL++S+D L+
Sbjct: 381 EDVLNRAVSYASGLPLVLEVVGSNLFGKRIEEWKGTLEGYEKIPNKKIHEILKVSYDALE 440

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVI-GIRVLIEKCLI---TVHNNTLW-- 293
           E ++ +FLDIAC FKG   + V + L     H +   + VL EK L+   T H+ +++  
Sbjct: 441 EEQQSVFLDIACCFKGCGLEVVEDILRAHYGHCITHHLGVLAEKSLVQICTYHSGSIYKV 500

Query: 294 -MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            +H+L++++G+++V+++SP+E G+RSRLW ++++ HVLTE+TGT  +E I L+    EN 
Sbjct: 501 TLHNLIEDMGKEVVRQESPKEPGERSRLWCQDDIVHVLTENTGTRNIEMIHLNCPSMENV 560

Query: 353 VYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
           +    + KA  KMTNL+ L I N Q   G +YL + LR   W G P K L S +   K  
Sbjct: 561 IEW--NGKAMKKMTNLKTLIIENGQFSRGPDYLPSSLRFCKWNGCPSKSLSSCILNKK-- 616

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
                              + +KV+ L+  + L ++PD +G PNLEKL  + C  L  IH
Sbjct: 617 ------------------FNYMKVLKLNSCQYLTQIPDVSGLPNLEKLSFQFCENLITIH 658

Query: 473 PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
            S+   N+L IL+ K C  L ++P                P     L CL  L+++    
Sbjct: 659 NSVGFLNRLEILDAKYCIKLQSVP----------------PLQ---LPCLKRLELAMCKS 699

Query: 533 FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNC 577
            + FPE++  M +L ++ L  T +   P SI+ LS L  L +  C
Sbjct: 700 LKSFPELLCKMTNLKDIWLNETCME-FPFSIQNLSELDRLQIYQC 743



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 109/224 (48%), Gaps = 12/224 (5%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
           ++ LKL+ C  L + P+ V  + +L +L F    ++  + +S+  L +LE+L+   C  L
Sbjct: 620 MKVLKLNSCQYLTQIPD-VSGLPNLEKLSFQFCENLITIHNSVGFLNRLEILDAKYCIKL 678

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV--PHSTSWYSYIP 709
             +P   + L  LK L L+ C  L++ PE L ++ +L+++ ++ T +  P S    S + 
Sbjct: 679 QSVPP--LQLPCLKRLELAMCKSLKSFPELLCKMTNLKDIWLNETCMEFPFSIQNLSELD 736

Query: 710 INLMRKSVALKLPSLSG------LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKN 763
              + +   L+ P  +         ++  L +   NL +  L   +    +++ L LS++
Sbjct: 737 RLQIYQCGMLRFPKQNDKMNSIVFSNVNHLRIEKSNLSDEFLRILLMWCVNVENLVLSES 796

Query: 764 SFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGC 807
           +F  LP  ++    L NI ++ CK L+ +   PPN++      C
Sbjct: 797 NFKILPECLSECHLLKNIYVDGCKFLEEIRGFPPNLKIFHAKDC 840


>gi|357440369|ref|XP_003590462.1| Disease resistance-like protein [Medicago truncatula]
 gi|355479510|gb|AES60713.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1035

 Score =  350 bits (899), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 234/685 (34%), Positives = 371/685 (54%), Gaps = 51/685 (7%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +  + +++  L+D G  D V M+G+ G+GGLGK+T+A+ +Y+ I+ +FE   FL++VREI
Sbjct: 179 LQDQVQQVNLLLDKGYDDEVHMVGLYGIGGLGKSTLAKAIYNFIADQFEGLCFLEDVREI 238

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+   L  LQ +LL + + L D  +  V +GI ++  RL RKK+LL++DDV  ++QL++L
Sbjct: 239 STPYNLKHLQEKLLLKTVGL-DIKLGGVSEGIAIIKQRLCRKKILLILDDVDKLEQLEAL 297

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG GS++IIT+R++HLL  HG++  +   GL   +AL+L    AFK  +     
Sbjct: 298 AGGLDWFGRGSKVIITTREKHLLTCHGIESTHAVKGLYVTKALELLRWMAFKHNKVPSSY 357

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R + YA GLPL +E++GS L G+S++EW+ TL+  E  P  +I +I ++S+D L+
Sbjct: 358 DDVLNRAVSYASGLPLVIEIVGSNLFGKSIEEWKGTLDGYEKIPNKKIQEIFKLSYDALE 417

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVI-GIRVLIEKCLITVHNNTLWMHDLL 298
           E E+ +FLDIAC FKG     V   L     H +   + VL+EK LI ++   + +HDL+
Sbjct: 418 EDEQSVFLDIACCFKGYRLTEVEKILHAHYGHCIKHHVGVLVEKSLIEINTQYVTLHDLI 477

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           ++ G++IV+++S +E G+R+RLW   ++ HVL ++TGT  +E I  +  +   E  +  +
Sbjct: 478 EDTGKEIVRKESRKEPGERNRLWCHNDIVHVLQKNTGTGNIEMIYWN--YPSMEPIIDWN 535

Query: 359 AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
            KAF KM+NL+ L I N Q     +YL + LR+L W GY  K L S+    K        
Sbjct: 536 RKAFKKMSNLKTLIIKNGQFSKSPKYLPSTLRVLIWEGYNAKSLSSSFLNKK-------- 587

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
                        + +KV+ L+  E L  +PD +  PNLEK     C  L  IH S+   
Sbjct: 588 ------------FENMKVLTLNFCEYLTHIPDVSHLPNLEKFSFAYCDNLITIHNSIGYL 635

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
           NKL +L+ + C+ L + P                P  ++   CL  L +S     + FPE
Sbjct: 636 NKLEVLDAEGCSKLESFP----------------PLQLT---CLKELKLSECESLKSFPE 676

Query: 539 IVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKL 598
           ++  M ++ E+ L GT+IR LP S + LS L  L L     L      +  +  L  +  
Sbjct: 677 LLGKMTNIEEIWLRGTSIRELPFSFQNLSELRDLALSKSGILR-FSSNIFMMPTLSKIYA 735

Query: 599 SGCS-KLKKFPEIVRS--MKDLSELFLDGTSIKE--VPSSIELLTKLELLNLSDCKNLVR 653
            GC   L K  +I+ S    ++  L L+  ++ +  +   + L   +  L LS+ KN+  
Sbjct: 736 RGCRLLLPKHKDILSSTVASNVEHLILENNNLSDECIRVVLTLCANVTCLRLSE-KNMKI 794

Query: 654 LPSSIIALKSLKTLNLSGCFKLENV 678
           LP  +     LK L L  C  LE +
Sbjct: 795 LPECLSECHLLKVLRLDDCKSLEEI 819



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 37/253 (14%)

Query: 593 LRSLKLSGCSKLKKFPEIVR--SMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKN 650
           ++ L L+ C  L   P++    +++  S  + D  ++  + +SI  L KLE+L+   C  
Sbjct: 591 MKVLTLNFCEYLTHIPDVSHLPNLEKFSFAYCD--NLITIHNSIGYLNKLEVLDAEGCSK 648

Query: 651 LVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSY 707
           L   P   + L  LK L LS C  L++ PE LG++ ++EE+ + GT++   P S    S 
Sbjct: 649 LESFPP--LQLTCLKELKLSECESLKSFPELLGKMTNIEEIWLRGTSIRELPFSFQNLSE 706

Query: 708 IPINLMRKSVALKLPS-LSGLCSLRKLNLTDCNLM--------EGALPSDIGNL------ 752
           +    + KS  L+  S +  + +L K+    C L+           + S++ +L      
Sbjct: 707 LRDLALSKSGILRFSSNIFMMPTLSKIYARGCRLLLPKHKDILSSTVASNVEHLILENNN 766

Query: 753 -------------CSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
                         ++  L LS+ +   LP  ++    L  + L+DCK L+ +  +PPN+
Sbjct: 767 LSDECIRVVLTLCANVTCLRLSEKNMKILPECLSECHLLKVLRLDDCKSLEEIRGIPPNL 826

Query: 800 RQVRVNGCASLVT 812
           +      C SL +
Sbjct: 827 KWFSAMRCESLTS 839


>gi|357499615|ref|XP_003620096.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495111|gb|AES76314.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1104

 Score =  350 bits (899), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 244/705 (34%), Positives = 384/705 (54%), Gaps = 43/705 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR  K+   +D GS+ V  M+GI G GG+GKTT+AR VY+ I+ +F+   FL +VRE 
Sbjct: 203 LESRVLKVNKFLDVGSTGVVHMLGIYGTGGMGKTTLARAVYNSIADQFDCLCFLHDVREN 262

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ +LLS+L++L D  + ++ +GI ++  RL R KVLL++DDV ++KQLQ L
Sbjct: 263 STKYGLEHLQEKLLSKLVEL-DIELGDINEGIPIIKKRLHRNKVLLILDDVHELKQLQVL 321

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG GSR+I+T+RD HLLK+HG++  Y+   LN  EAL+L    +FK  +     
Sbjct: 322 AGGLDWFGPGSRVIVTTRDRHLLKSHGIERAYELPKLNETEALELLRWNSFKNNKVDSNF 381

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +    + YA GLPLALEV+GS L G ++ EW+S L+R    P  +I +IL++SFD L+
Sbjct: 382 DGVLRCAVTYASGLPLALEVVGSNLFGNNIGEWKSALDRYRRIPIKKIQEILKVSFDALE 441

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVH----NNTLWM 294
           + E+ +FLDIAC FKG +   + + L    G      I VL EK LI ++    N  + +
Sbjct: 442 KDEQNVFLDIACCFKGYNLKELEDILYAHYGNCMKYQISVLDEKSLIKINRYEGNYVVTL 501

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           H L++++G++IV  +SP E G+ SRLW  +++  VL E+ G+  +E I L+    E EV 
Sbjct: 502 HFLIEKMGKEIVNEKSPNEPGRHSRLWFHKDIIDVLEENQGSSEIEIIYLEFPSSEEEV- 560

Query: 355 LCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
           +        KM NL+ L + N    NG +YL N LR+L W  YP   +PS+    K   +
Sbjct: 561 VDWEGDELKKMENLKTLIVKNGTFSNGPKYLPNSLRVLEWPKYPSPVIPSDFCPKK---L 617

Query: 415 YMCYSRIGEL----WKG-IKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLY 469
            +C  +  +     + G +K    ++ + L   + L R+ D +  PNLE    + C  L 
Sbjct: 618 SICKLQQSDFISFGFHGTMKRFGNVRELNLDDCQYLTRIHDVSNLPNLEIFSFQFCKNLI 677

Query: 470 EIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG 529
           EIH S+   NKL ILN  +C+ L + P            +KS      GL   ++L    
Sbjct: 678 EIHESVGFLNKLQILNAVNCSKLRSFPA-----------MKSASLRRLGLAYCTSL---- 722

Query: 530 DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSN 589
               + FPEI+  M++++ + L  T+I  LP+S + L+GL +  ++    ++ LP ++  
Sbjct: 723 ----KTFPEILGEMKNITHISLMKTSIDKLPVSFQNLTGLQIFFIEG-NVVQRLPSSIFR 777

Query: 590 LKCLRSLKLSGCSKLK---KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLS 646
           +  L  +    C   K   K+  +V +     +L     S + +P  +     +E LNLS
Sbjct: 778 MPNLSKITFYRCIFPKLDDKWSSMVSTSPTDIQLVKCNLSDEFLPIVVMWSANVEFLNLS 837

Query: 647 DCKNLVRLPSSIIALKSLKTLNLSGC---FKLENVPETLGQIESL 688
           +  N   LP  I   + L +L L  C    ++  +P  L  + ++
Sbjct: 838 E-NNFTILPECIKDCRFLWSLRLDDCKCLREIRGIPPNLKHLSAI 881



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 150/347 (43%), Gaps = 69/347 (19%)

Query: 586 TVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLN 644
           T+     +R L L  C  L +  + V ++ +L    F    ++ E+  S+  L KL++LN
Sbjct: 635 TMKRFGNVRELNLDDCQYLTRIHD-VSNLPNLEIFSFQFCKNLIEIHESVGFLNKLQILN 693

Query: 645 LSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHS 701
             +C  L   P+   A  SL+ L L+ C  L+  PE LG+++++  + +  T++   P S
Sbjct: 694 AVNCSKLRSFPAMKSA--SLRRLGLAYCTSLKTFPEILGEMKNITHISLMKTSIDKLPVS 751

Query: 702 TSWYSYIPINLMRKSVALKLPS-------LSGL----CSLRKLN---------------L 735
               + + I  +  +V  +LPS       LS +    C   KL+               L
Sbjct: 752 FQNLTGLQIFFIEGNVVQRLPSSIFRMPNLSKITFYRCIFPKLDDKWSSMVSTSPTDIQL 811

Query: 736 TDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQL 795
             CNL +  LP  +    +++ L LS+N+F  LP  I     L ++ L+DCK L+ +  +
Sbjct: 812 VKCNLSDEFLPIVVMWSANVEFLNLSENNFTILPECIKDCRFLWSLRLDDCKCLREIRGI 871

Query: 796 PPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSN 855
           PPN++ +    C SL +       CK+                      +L + L     
Sbjct: 872 PPNLKHLSAIRCKSLTSS------CKN---------------------MLLNQELHEAGG 904

Query: 856 TRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
           T+   S     + IP+WF +Q+ G +I+       + + KL   A+C
Sbjct: 905 TKFCFSGF---ARIPDWFDHQSMGHTIS------FWFRNKLPSMALC 942


>gi|351727991|ref|NP_001235644.1| TIR-NBS-LRR type disease resistance protein [Glycine max]
 gi|223452593|gb|ACM89623.1| TIR-NBS-LRR type disease resistance protein [Glycine max]
          Length = 1552

 Score =  350 bits (898), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 247/711 (34%), Positives = 377/711 (53%), Gaps = 59/711 (8%)

Query: 16   SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQ 75
            + DVR++GI GMGG+GK+T+ + +Y+ ISH+F +  ++D+V ++    G + +Q++LLSQ
Sbjct: 670  NDDVRVVGITGMGGIGKSTLGQALYERISHQFNSRCYIDDVSKLYQGYGTLGVQKELLSQ 729

Query: 76   LLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNR-----EWFGSGS 130
             L   +  I NV +G  ++  RL   K L+++D+V   KQL    G R     +  G GS
Sbjct: 730  SLNEKNLKICNVSNGTLLVWERLSNAKALIILDNVDQDKQLDMFTGGRNDLLRKCLGKGS 789

Query: 131  RIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYA 190
             +II SRD+ +LK HGVD +Y+   LN ++AL LF  KAFK    + +  +L++ ++ + 
Sbjct: 790  IVIIISRDQQILKAHGVDVIYRVEPLNDNDALGLFCKKAFKNNYMMSDFEKLTSDVLSHC 849

Query: 191  GGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIA 250
             G PLA+EVLGS L  + V  WRS L  L       I+++L+ISFD L++  K+IFLDIA
Sbjct: 850  QGHPLAIEVLGSSLFDKDVLHWRSALALLRENKSKSIMNVLRISFDQLEDTHKEIFLDIA 909

Query: 251  CFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQS 310
            CFF      YV   L+  GF+P  G++VL++K LIT+ +  + MHDLL +LG+ IV+ +S
Sbjct: 910  CFFNHYPVKYVKEVLDFRGFNPEYGLQVLVDKSLITMDSRQIQMHDLLCDLGKYIVREKS 969

Query: 311  PEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMT---- 366
            P +  K SRLW  +++  V++++   + VE I L                  S M+    
Sbjct: 970  PRKPWKWSRLWDVKDILKVMSDNKAADNVEAIFLIEKSDILRTISTMRVDVLSTMSCLKL 1029

Query: 367  NLRLLKICNLQL---PNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGE 423
                    N+++      L  LSN L  LGW  YP + LP + + DK +E+ +  S I +
Sbjct: 1030 LKLDHLDFNVKINFFSGTLVKLSNELGYLGWEKYPFECLPPSFEPDKLVELILPKSNIKQ 1089

Query: 424  LWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLII 483
            LW+G K L  L+ + LS S+NLI+MP    A  LE L LEGC +L EI  S++L  KL  
Sbjct: 1090 LWEGTKPLPNLRRLDLSGSKNLIKMPYIGDALYLESLDLEGCIQLEEIGLSIVLSPKLTS 1149

Query: 484  LNMKDCTSLITLPG--------KILMKSLEKL----------------------NLKSLP 513
            LN+++C SLI LP         K+L+   +KL                      NL SLP
Sbjct: 1150 LNLRNCKSLIKLPQFGEDLILEKLLLGGCQKLRHIDPSIGLLKKLRRLNLKNCKNLVSLP 1209

Query: 514  TTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSEL----HLEGTAIRGLPLSIELLSGL 569
             +I GL  L  L++SG  K       + + E L EL     L+   I G P+  +  S  
Sbjct: 1210 NSILGLNSLEDLNLSGCSK-------LYNTELLYELRDAEQLKKIDIDGAPIHFQSTSS- 1261

Query: 570  VLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKE 629
               + ++ +S+  L  +     C+  L LS C+ L + P+ +  M  L  L L G +   
Sbjct: 1262 --YSREHKKSVSCLMPSSPIFPCMLKLDLSFCN-LVEIPDAIGIMCCLQRLDLSGNNFAT 1318

Query: 630  VPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
            +P +++ L+KL  L L  CK L  LP     + +   L  +G + + N PE
Sbjct: 1319 LP-NLKKLSKLVCLKLQHCKQLKSLPELPSRIYNFDRLRQAGLY-IFNCPE 1367



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 196/420 (46%), Gaps = 80/420 (19%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
            LR L LSG   L K P I  ++  L  L L+G   ++E+  SI L  KL  LNL +CK+L
Sbjct: 1100 LRRLDLSGSKNLIKMPYIGDALY-LESLDLEGCIQLEEIGLSIVLSPKLTSLNLRNCKSL 1158

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQ------------------------IES 687
            ++LP     L  L+ L L GC KL ++  ++G                         + S
Sbjct: 1159 IKLPQFGEDL-ILEKLLLGGCQKLRHIDPSIGLLKKLRRLNLKNCKNLVSLPNSILGLNS 1217

Query: 688  LEELDISGTAVPHSTSWYSYI--------------PINLM---------RKSVALKLPSL 724
            LE+L++SG +  ++T     +              PI+           +KSV+  +PS 
Sbjct: 1218 LEDLNLSGCSKLYNTELLYELRDAEQLKKIDIDGAPIHFQSTSSYSREHKKSVSCLMPSS 1277

Query: 725  SGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELE 784
                 + KL+L+ CNL+E  +P  IG +C L+ L LS N+F +LP ++  LSKL+ ++L+
Sbjct: 1278 PIFPCMLKLDLSFCNLVE--IPDAIGIMCCLQRLDLSGNNFATLP-NLKKLSKLVCLKLQ 1334

Query: 785  DCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFS 844
             CK+L+SLP+LP  I               D L+  ++   +  C + +       +AFS
Sbjct: 1335 HCKQLKSLPELPSRIYN------------FDRLR--QAGLYIFNCPELVDRERCTDMAFS 1380

Query: 845  MLREYLEAVS-NTRQHLS-VVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
               +  + +      H+S VV PGSEIP WF  ++EG+ +++   S + +    +G A C
Sbjct: 1381 WTMQSCQVLYLCPFYHVSRVVSPGSEIPRWFNNEHEGNCVSLD-ASPVMHDHNWIGVAFC 1439

Query: 903  CVFHVLKNSRGNNCF----GSYPTHQ-LNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSR 957
             +F V   +     F    G+YP +  +       +      DK     SDH+WL ++ R
Sbjct: 1440 AIFVVPHETLSAMSFSETEGNYPDYNDIPVDFYEDVDLELVLDK-----SDHMWLFFVGR 1494


>gi|25247163|gb|AAN73007.1| NBS-LRR resistance protein RS6-8 [Helianthus annuus]
          Length = 577

 Score =  350 bits (897), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 224/583 (38%), Positives = 319/583 (54%), Gaps = 53/583 (9%)

Query: 35  IARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDML 94
           +A   Y  ISH FE    L+N+RE SSK GL  LQ   LS +LK  D  + N   G  M+
Sbjct: 1   LASAAYMEISHLFEGCCLLENIREESSKQGLKKLQENFLSLVLK-TDVKVGNEIIGRSMI 59

Query: 95  GSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPH 154
            SRL  K+ L+V+DDV + +QL++LAG+ +WFG GSRIIIT+RD HLL +     +Y+ +
Sbjct: 60  KSRLSHKRFLVVLDDVDNFEQLEALAGSHDWFGEGSRIIITTRDVHLLSSRA-QTIYEVN 118

Query: 155 GLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRS 214
            L+ DEA++L    A+   +P++E   L+  ++ YAGGLPLAL+VLGSFL G+  DEW+S
Sbjct: 119 LLSQDEAIKLLKRYAYHKDKPVEEYEMLAEEVVSYAGGLPLALKVLGSFLYGKDKDEWKS 178

Query: 215 TLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFK----GNDRDYVTNFLEGCGF 270
           TL +L+  P  ++++ L+IS+DGL+  +K++FLDIACF +     +  D     L+ C  
Sbjct: 179 TLAKLKCIPEEKVMERLKISYDGLEPYQKELFLDIACFMRRWWLQSVLDRAMMVLDACNL 238

Query: 271 HPVIGIRVLIEKCLITVHNNTLW-MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHV 329
           HPVIG++VL +K LI V     + MHDL++E+   IV+ + P    K SR+W  E++  +
Sbjct: 239 HPVIGLKVLEQKSLIKVSKKGRFEMHDLIEEMAHYIVRGEHPNNPEKHSRIWNREDLEEL 298

Query: 330 LTESTGTELVEGIVLDNYHHENEVYLCASA----KAFSKMTNLRLLKICNLQLPNGLEYL 385
                    +E  VL N      +Y+ +           M NLR +              
Sbjct: 299 CAMGAAAPSMENEVLANL----PMYIISHPGLLLDVVPNMKNLRWI-------------- 340

Query: 386 SNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENL 445
                +L   G P    PSN Q  K   + +  S+  ELW+G K L  LK++ LS S NL
Sbjct: 341 -----MLIGHGDPSSSFPSNFQPTKLRCLMLIESKQKELWEGCKSLPNLKILDLSGSSNL 395

Query: 446 IRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLE 505
           I+ PDF G P LE+LIL+ C RL EIHPS+  H +L+ +NMK C  L   P  I MK LE
Sbjct: 396 IKTPDFEGLPCLERLILKYCERLEEIHPSIGYHKRLVYVNMKGCARLKRFPPIIHMKKLE 455

Query: 506 KLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSI-E 564
            LNL                D S   K ++FP+I  +M+ L  + L  T I  +P S+  
Sbjct: 456 TLNLS---------------DCS---KLQQFPDIQSNMDSLVTIDLHNTGIEIIPPSVGR 497

Query: 565 LLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKF 607
             + LV L+L  C  L+ +  +   LK L+ L LS C  L+ F
Sbjct: 498 FCTNLVSLDLSQCYKLKRIEDSFHLLKSLKDLNLSCCFGLQSF 540



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 138/323 (42%), Gaps = 74/323 (22%)

Query: 452 TGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITL--------------PG 497
             AP++E  +L         HP LLL    ++ NMK+   ++ +              P 
Sbjct: 303 AAAPSMENEVLANLPMYIISHPGLLLD---VVPNMKNLRWIMLIGHGDPSSSFPSNFQPT 359

Query: 498 KILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPE----------IVEHMEHLS 547
           K+    L +   K L      L  L  LD+SG     + P+          I+++ E L 
Sbjct: 360 KLRCLMLIESKQKELWEGCKSLPNLKILDLSGSSNLIKTPDFEGLPCLERLILKYCERLE 419

Query: 548 ELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKF 607
           E+H           SI     LV +N+K C  L+  P  + ++K L +L LS CSKL++F
Sbjct: 420 EIHP----------SIGYHKRLVYVNMKGCARLKRFPPII-HMKKLETLNLSDCSKLQQF 468

Query: 608 PEIVRSMKDLSELFLDGTSIKEVPSSI-ELLTKLELLNLSDCKNLVRLPSSIIALKSLKT 666
           P+I  +M  L  + L  T I+ +P S+    T L  L+LS C  L R+  S   LKSLK 
Sbjct: 469 PDIQSNMDSLVTIDLHNTGIEIIPPSVGRFCTNLVSLDLSQCYKLKRIEDSFHLLKSLKD 528

Query: 667 LNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSG 726
           LNLS CF L++  +                                  + V+LKLP    
Sbjct: 529 LNLSCCFGLQSFRQD---------------------------------RLVSLKLPQFPR 555

Query: 727 LCSLRKLNLTDCNLMEGALPSDI 749
              LRKLNL  C L +G +PSDI
Sbjct: 556 F--LRKLNLRGCRLEDGGIPSDI 576


>gi|240256307|ref|NP_197336.4| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332005159|gb|AED92542.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1245

 Score =  350 bits (897), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 288/941 (30%), Positives = 453/941 (48%), Gaps = 126/941 (13%)

Query: 7    KLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVR-----EISS 61
            K++ L+   S DVRMIGI G  G+GKTTIAR + D IS  F+ + F+D++R         
Sbjct: 202  KMKSLLCLESGDVRMIGIVGPPGIGKTTIARALRDQISENFQLTAFIDDIRLTYPRRCYG 261

Query: 62   KGGL-------------VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVID 108
            + GL             + LQ   LS++L   D  I N    ++   + L+ +KVL+++D
Sbjct: 262  ESGLKPPTAFMNDDRRKIVLQTNFLSEILNQKDIVIHN----LNAAPNWLKDRKVLVILD 317

Query: 109  DVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMK 168
            DV  ++QL ++A    WFG GSRIIIT++D  LLK H +D +Y+      D+ALQ+F + 
Sbjct: 318  DVDHLEQLDAMAKETGWFGYGSRIIITTQDRKLLKAHNIDYIYEVGLPRKDDALQIFCLS 377

Query: 169  AFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEIL 228
            AF    P  +   L+  + + AG LPL L+VLGS+L G S++EW++ L RL+     +I 
Sbjct: 378  AFGQNFPHDDFQYLACEVTQLAGELPLGLKVLGSYLKGMSLEEWKNALPRLKTCLDGDIE 437

Query: 229  DILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH 288
              L+ S+D L   ++ +FL IAC F+G +  +V  +L         G+ VL +K LI++ 
Sbjct: 438  KTLRYSYDALSRKDQALFLHIACLFRGYEVGHVKQWLGKSDLDVDHGLDVLRQKSLISID 497

Query: 289  NNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTEST-GTELVEGIVLDNY 347
               L MH LLQ+LG +IV+ QS +E  +R  L    ++  V T +T GT+ + GI L+  
Sbjct: 498  MGFLNMHSLLQQLGVEIVRNQSSQEPRERQFLVDVNDISDVFTYNTAGTKSILGIRLNVP 557

Query: 348  HHENEVYLCASAKAFSKMTNLRLLKIC-----NLQLPNGLEYLSNRLRLLGWRGYPLKFL 402
              E ++ +      F  MTNL+ L +       L LP GL  L  +LR+L W   PL+  
Sbjct: 558  EIEEKIVI--DELVFDGMTNLQFLFVNEGFGDKLSLPRGLNCLPGKLRVLHWNYCPLRLW 615

Query: 403  PSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
            PS    +  +E+ M  +   +LW+ I  L  LK M LSHS++L  +PD + A NLE+L L
Sbjct: 616  PSKFSANFLVELVMRGNNFEKLWEKILPLKSLKRMDLSHSKDLKEIPDLSNATNLEELDL 675

Query: 463  EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCL 522
              C+ L E+  S+     L  L +  C SL                LK LP++I     L
Sbjct: 676  SSCSGLLELTDSIGKATNLKRLKLA-CCSL----------------LKKLPSSIGDATNL 718

Query: 523  STLDVSGDLKFREFPEIVEHMEHLSELHL-EGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
              LD+     F E P+ +  + +L  L L     +  LP SI+    L +L++  C  L+
Sbjct: 719  QVLDLFHCESFEELPKSIGKLTNLKVLELMRCYKLVTLPNSIK-TPKLPVLSMSECEDLQ 777

Query: 582  ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLE 641
              P  ++         L  C++LK FPEI  ++K   EL L  T+I+ VPSSI   + L 
Sbjct: 778  AFPTYIN---------LEDCTQLKMFPEISTNVK---ELDLRNTAIENVPSSICSWSCLY 825

Query: 642  LLNLSDCKNLVRLPS---SIIALK-----------------SLKTLNLSGCFKLENVPET 681
             L++S+C+NL   P+   SI+ L                   L+TL + GC +L  +   
Sbjct: 826  RLDMSECRNLKEFPNVPVSIVELDLSKTEIEEVPSWIENLLLLRTLTMVGCKRLNIISPN 885

Query: 682  LGQIESLEELDISGTAVP-HSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNL 740
            + ++++LE+L++    V   + S+Y+++  +                      +  D  L
Sbjct: 886  ISKLKNLEDLELFTDGVSGDAASFYAFVEFS----------------------DRHDWTL 923

Query: 741  MEGALPSDIGNLCSLK---ELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPP 797
                    I  +C  K    L      F ++P  I  L  L  +++  C+ L SLPQLP 
Sbjct: 924  ESDFQVHYILPICLPKMAISLRFWSYDFETIPDCINCLPGLSELDVSGCRNLVSLPQLPG 983

Query: 798  NIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTR 857
            ++  +  N C SL  +  + +  +       C++              L +    +  T 
Sbjct: 984  SLLSLDANNCESLERINGSFQNPEICLNFANCIN--------------LNQEARKLIQTS 1029

Query: 858  QHLSVVVPGSEIPEWFMYQNEGSSITV-----TRPSNLYNK 893
                 ++PG+E+P  F  Q+   S+T+     T PS L  K
Sbjct: 1030 ACEYAILPGAEVPAHFTDQDTSGSLTINITTKTLPSRLRYK 1070


>gi|30694677|ref|NP_199318.2| putative WRKY transcription factor 16 [Arabidopsis thaliana]
 gi|332007812|gb|AED95195.1| putative WRKY transcription factor 16 [Arabidopsis thaliana]
          Length = 1344

 Score =  350 bits (897), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 246/686 (35%), Positives = 359/686 (52%), Gaps = 80/686 (11%)

Query: 18  DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFL-DNVREISSKGGLVSLQRQLLSQL 76
           D+R +GI GM G+GKTT+A+ V+D +S EF+A  F+ D  + I  KG    L+ Q L + 
Sbjct: 162 DIRCVGIWGMPGIGKTTLAKAVFDQMSGEFDAHCFIEDYTKAIQEKGVYCLLEEQFLKE- 220

Query: 77  LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITS 136
               +         + +L  RL  K+VL+V+DDV     ++S  G  +WFG  S IIITS
Sbjct: 221 ----NAGASGTVTKLSLLRDRLNNKRVLVVLDDVRSPLVVESFLGGFDWFGPKSLIIITS 276

Query: 137 RDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLA 196
           +D+ + +   V+++Y+  GLN  EALQLF++ A       Q   ++S ++I+YA G PLA
Sbjct: 277 KDKSVFRLCRVNQIYEVQGLNEKEALQLFSLCASIDDMAEQNLHEVSMKVIKYANGHPLA 336

Query: 197 LEVLGSFLSGRS-VDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKG 255
           L + G  L G+    E      +L+  PP+  +D ++ S+D L + EK IFLDIACFF+G
Sbjct: 337 LNLYGRELMGKKRPPEMEIAFLKLKECPPAIFVDAIKSSYDTLNDREKNIFLDIACFFQG 396

Query: 256 NDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELG 315
            + DYV   LEGCGF P +GI VL+EK L+T+  N + MH+L+Q++G+QI+ R++  +  
Sbjct: 397 ENVDYVMQLLEGCGFFPHVGIDVLVEKSLVTISENRVRMHNLIQDVGRQIINRET-RQTK 455

Query: 316 KRSRLWK---------------EEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +RSRLW+                EE       +   E +EG+ LD  +   ++       
Sbjct: 456 RRSRLWEPCSIKYLLEDKEQNENEEQKTTFERAQVPEEIEGMFLDTSNLSFDI----KHV 511

Query: 361 AFSKMTNLRLLKI---------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           AF  M NLRL KI          N  L   L  L N LRLL W  YPL+FLP N      
Sbjct: 512 AFDNMLNLRLFKIYSSNPEVHHVNNFLKGSLSSLPNVLRLLHWENYPLQFLPQNFDPIHL 571

Query: 412 IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
           +EI M YS++ +LW G K L+ LK + L HS+ L+ + D   A NLE + L+GCTRL   
Sbjct: 572 VEINMPYSQLKKLWGGTKDLEMLKTIRLCHSQQLVDIDDLLKAQNLEVVDLQGCTRLQSF 631

Query: 472 HPS-LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGD 530
             +  LLH  L ++N+  CT + + P   +  ++E LNL+   T +S L+         D
Sbjct: 632 PATGQLLH--LRVVNLSGCTEIKSFPE--IPPNIETLNLQG--TGVSNLE-------QSD 678

Query: 531 LKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
           LK                     T++  +  S +    L  L L +C  L  LP  V NL
Sbjct: 679 LK-------------------PLTSLMKISTSYQNPGKLSCLELNDCSRLRSLPNMV-NL 718

Query: 591 KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKN 650
           + L++L LSGCS+L+      R++K   EL+L GT++++VP   +L   LE  N   C  
Sbjct: 719 ELLKALDLSGCSELETIQGFPRNLK---ELYLVGTAVRQVP---QLPQSLEFFNAHGC-- 770

Query: 651 LVRLPSSIIALKSLKT-LNLSGCFKL 675
            V L S  +  K L      S CF L
Sbjct: 771 -VSLKSIRLDFKKLPVHYTFSNCFDL 795



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 122/280 (43%), Gaps = 43/280 (15%)

Query: 640 LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP 699
           LE+++L  C  L   P++   L  L+ +NLSGC ++++ PE    IE+L   ++ GT V 
Sbjct: 617 LEVVDLQGCTRLQSFPATG-QLLHLRVVNLSGCTEIKSFPEIPPNIETL---NLQGTGVS 672

Query: 700 HSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELY 759
           +          +LM+ S + + P       L  L L DC+ +  +LP+ + NL  LK L 
Sbjct: 673 NLEQSDLKPLTSLMKISTSYQNPG-----KLSCLELNDCSRLR-SLPNMV-NLELLKALD 725

Query: 760 LSK----NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLD 815
           LS      +    P ++  L  +          ++ +PQLP ++     +GC SL ++  
Sbjct: 726 LSGCSELETIQGFPRNLKELYLV-------GTAVRQVPQLPQSLEFFNAHGCVSLKSIRL 778

Query: 816 ALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYL-EAVSNTRQHLSVVVPGSEIPEWFM 874
             K      T   C D         L+  ++ ++L +A++N        V    IP    
Sbjct: 779 DFKKLPVHYTFSNCFD---------LSPQVVNDFLVQAMAN--------VIAKHIPRE-R 820

Query: 875 YQNEGSSITVTRPSNLYNKK--KLVGYAICCVFHVLKNSR 912
           +    S  TV R S    ++  K + ++ C   H  +NS+
Sbjct: 821 HVTGFSQKTVQRSSRDSQQELNKTLAFSFCAPSHANQNSK 860



 Score = 43.5 bits (101), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 2/84 (2%)

Query: 229  DILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITV 287
            ++L++ + GLQE+ K +FL IA  F   D   V   +          G++VL  + LI V
Sbjct: 1021 EVLRVRYAGLQEIYKALFLYIAGLFNDEDVGLVAPLIANIIDMDVSYGLKVLAYRSLIRV 1080

Query: 288  HNN-TLWMHDLLQELGQQIVQRQS 310
             +N  + MH LL+++G++I+  +S
Sbjct: 1081 SSNGEIVMHYLLRQMGKEILHTES 1104


>gi|27764545|gb|AAO23075.1| R 5 protein [Glycine max]
          Length = 907

 Score =  349 bits (896), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 257/708 (36%), Positives = 373/708 (52%), Gaps = 68/708 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLG-----KTTIARVVYD--LISHEFEASGFL 53
           ++S+ +++R L+D G+ D    G+C +G  G     K+T+AR VY+  +I+  F+   FL
Sbjct: 189 LESKVQEVRKLLDVGNHD----GVCMIGIHGMGGIGKSTLARAVYNDLIITENFDGLCFL 244

Query: 54  DNVREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDV 113
           +NVRE S+  GL  LQ  LLS++L   D  + +   GI  + S L+ KKVLL++DDV   
Sbjct: 245 ENVRESSNNHGLQHLQSILLSEILG-EDIKVRSKQQGISKIQSMLKGKKVLLILDDVDKP 303

Query: 114 KQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY 173
           +QLQ++AG R+WFG GS IIIT+RD+ LL  HGV + Y+   LN + ALQL    AFK  
Sbjct: 304 QQLQTIAGRRDWFGPGSIIIITTRDKQLLAPHGVKKRYEVEVLNQNAALQLLTWNAFKRE 363

Query: 174 QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
           +       +  R++ YA GLPLALEV+GS + G+ V EW+S +E  +  P  EIL+IL++
Sbjct: 364 KIDPSYEDVLNRVVTYASGLPLALEVIGSNMFGKRVAEWKSAVEHYKRIPNDEILEILKV 423

Query: 234 SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEG----CGFHPVIGIRVLIEKCLITVHN 289
           SFD L E +K +FLDIAC FKG     V + L G    C  H    I VL++K LI V +
Sbjct: 424 SFDALGEEQKNVFLDIACCFKGCKLTEVEHMLRGLYNNCMKH---HIDVLVDKSLIKVRH 480

Query: 290 NTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHH 349
            T+ MHDL+Q +G++I ++ SPEE GK  RLW  +++  VL  +TGT  +E I LD    
Sbjct: 481 GTVNMHDLIQVVGREIERQISPEEPGKCKRLWLPKDIIQVLKHNTGTSKIEIICLDFSIS 540

Query: 350 ENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMD 409
           + E  +  +  AF KM NL++L I N +   G  Y    LR+L W  YP K LPSN   +
Sbjct: 541 DKEQTVEWNQNAFMKMENLKILIIRNGKFSKGPNYFPEGLRVLEWHRYPSKCLPSNFHPN 600

Query: 410 KTIEIYMCYSRIGEL-WKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
             +   +  S +    + G      L V+   + + L ++PD +  PNL +L  +GC  L
Sbjct: 601 NLLICKLPDSSMASFEFHGSSKFGHLTVLKFDNCKFLTQIPDVSDLPNLRELSFKGCESL 660

Query: 469 YEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVS 528
             +  S+   NKL  LN   C  L + P          LNL S          L TL +S
Sbjct: 661 VAVDDSIGFLNKLKKLNAYGCRKLTSFP---------PLNLTS----------LETLQLS 701

Query: 529 GDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS 588
           G      FPEI+  ME++ +L L    I+ LP S + L GL +L L +C  +E LP  + 
Sbjct: 702 GCSSLEYFPEILGEMENIKQLVLRDLPIKELPFSFQNLIGLQVLYLWSCLIVE-LPCRLV 760

Query: 589 NLKCLRSLKLSGCSKLK---------KFPEIVRSMKDL---------SELFLDGTSIKEV 630
            +  L  L +  C++ +         K   I+ S              + FL G+     
Sbjct: 761 MMPELFQLHIEYCNRWQWVESEEGEEKVGSILSSKARWFRAMNCNLCDDFFLTGS----- 815

Query: 631 PSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
               +  T +E L+LS   N   LP     LK L+TL++S C  L+ +
Sbjct: 816 ----KRFTHVEYLDLSG-NNFTILPEFFKELKFLRTLDVSDCEHLQKI 858



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 126/274 (45%), Gaps = 39/274 (14%)

Query: 540 VEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKL 598
           V  + +L EL  +G  ++  +  SI  L+ L  LN   CR L   P    NL  L +L+L
Sbjct: 643 VSDLPNLRELSFKGCESLVAVDDSIGFLNKLKKLNAYGCRKLTSFPPL--NLTSLETLQL 700

Query: 599 SGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSI 658
           SGCS L+ FPEI+  M+++ +L L    IKE+P S + L  L++L L  C  +V LP  +
Sbjct: 701 SGCSSLEYFPEILGEMENIKQLVLRDLPIKELPFSFQNLIGLQVLYLWSCL-IVELPCRL 759

Query: 659 IALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVA 718
           + +  L  L++  C + +        +ES E  +  G+ +     W+             
Sbjct: 760 VMMPELFQLHIEYCNRWQ-------WVESEEGEEKVGSILSSKARWF------------- 799

Query: 719 LKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
                       R +N   CNL +    +       ++ L LS N+F  LP     L  L
Sbjct: 800 ------------RAMN---CNLCDDFFLTGSKRFTHVEYLDLSGNNFTILPEFFKELKFL 844

Query: 779 LNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVT 812
             +++ DC+ LQ +  LPPN++  R   CASL +
Sbjct: 845 RTLDVSDCEHLQKIRGLPPNLKDFRAINCASLTS 878


>gi|357499249|ref|XP_003619913.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494928|gb|AES76131.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1018

 Score =  349 bits (896), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 237/697 (34%), Positives = 367/697 (52%), Gaps = 76/697 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + SR E+++ L+D GS DV  M+G+ G GG+GK+T+A+ VY+ ++ +FE   FL NVRE 
Sbjct: 189 LQSRIEQVKLLLDMGSEDVVHMVGLYGTGGMGKSTLAKAVYNFVADQFEGVCFLHNVRES 248

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+   L  LQ++LLS+++K  D  + +V +GI ++  RL RKK+LL++DDV  ++QL++L
Sbjct: 249 STLKNLKHLQKKLLSKIVKF-DGKLEDVSEGIPIIKERLSRKKILLILDDVDKLEQLEAL 307

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG GSR+IIT+RD+HLL  HG+   +    LN  EAL+L    AFK  +     
Sbjct: 308 AGGLDWFGHGSRVIITTRDKHLLACHGITSTHAVEELNETEALELLRRMAFKNDKVPSTY 367

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            ++  R++ YA GLPLA+  +G  L GR V++W+  L+  E  P  +I  ILQ+S+D L+
Sbjct: 368 EEILNRVVTYASGLPLAIVTIGDNLFGRKVEDWKRILDEYENIPNKDIQRILQVSYDALE 427

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPV-IGIRVLIEKCLIT--VHNNTLWMHD 296
             EK +FLDIAC FKG     V   L     H +   + VL EK LI    ++  + +HD
Sbjct: 428 PKEKSVFLDIACCFKGCKWTKVKKILHAHYGHCIEHHVGVLAEKSLIGHWEYDTQMTLHD 487

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           L++++G++IV+++SP+  G+RSRLW  +++  VL ++TGTE +E I L       E    
Sbjct: 488 LIEDMGKEIVRQESPKNPGERSRLWFHDDIFDVLRDNTGTENIEMIYLKYGLTARETEW- 546

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
               AF+KMTNL+ L I + +   G  YL + LR L W  Y  K L   L          
Sbjct: 547 -DGMAFNKMTNLKTLIIDDYKFSGGPGYLPSSLRYLEWIDYDFKSLSCILS--------- 596

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
                       K  + +KV+ L +S +L  +PD +G PNLEK   + C  L  IH S+ 
Sbjct: 597 ------------KEFNYMKVLKLDYSSDLTHIPDVSGLPNLEKCSFQFCFSLITIHSSIG 644

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
             NKL ILN   C+ L   P  + + SL+K  +          KC S          + F
Sbjct: 645 HLNKLEILNAYGCSKLEHFP-PLQLPSLKKFEIS---------KCES---------LKNF 685

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
           PE++  M ++ ++ +   +I  LP S +                        N   L+ L
Sbjct: 686 PELLCKMRNIKDIKIYAISIEELPYSFQ------------------------NFSELQRL 721

Query: 597 KLSGCS-KLKKFPEIVRSM--KDLSELFLDGTSIKE--VPSSIELLTKLELLNLSDCKNL 651
           K+S C  + +K+ + + S+   ++  + L G  + +  +P  ++    +  L+LS   N 
Sbjct: 722 KISRCYLRFRKYYDTMNSIVFSNVEHVDLAGNLLSDECLPILLKWFVNVTFLDLSCNYNF 781

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
             LP  +     L+ LNL  C  LE +      +ESL
Sbjct: 782 TILPECLGECHCLRHLNLRFCGALEEIRGIPPNLESL 818



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 135/324 (41%), Gaps = 50/324 (15%)

Query: 578 RSLEILPVTVSNLKCLRS--------LKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIK 628
           R LE +     +L C+ S        LKL   S L   P+ V  + +L +  F    S+ 
Sbjct: 579 RYLEWIDYDFKSLSCILSKEFNYMKVLKLDYSSDLTHIPD-VSGLPNLEKCSFQFCFSLI 637

Query: 629 EVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
            + SSI  L KLE+LN   C  L   P   + L SLK   +S C  L+N PE L ++ ++
Sbjct: 638 TIHSSIGHLNKLEILNAYGCSKLEHFPP--LQLPSLKKFEISKCESLKNFPELLCKMRNI 695

Query: 689 EELDISGTAV---PHSTSWYSYIP-INLMRKSVALK--LPSLSGLC--SLRKLNLTDCNL 740
           +++ I   ++   P+S   +S +  + + R  +  +    +++ +   ++  ++L    L
Sbjct: 696 KDIKIYAISIEELPYSFQNFSELQRLKISRCYLRFRKYYDTMNSIVFSNVEHVDLAGNLL 755

Query: 741 MEGALPSDIGNLCSLKELYLSKN-SFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
            +  LP  +    ++  L LS N +F  LP  +     L ++ L  C  L+ +  +PPN+
Sbjct: 756 SDECLPILLKWFVNVTFLDLSCNYNFTILPECLGECHCLRHLNLRFCGALEEIRGIPPNL 815

Query: 800 RQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQH 859
             +  + C                       DSL     + L    L E      +   H
Sbjct: 816 ESLFADNC-----------------------DSLSSSSRRMLMSQKLHE------SGCTH 846

Query: 860 LSVVVPGSEIPEWFMYQNEGSSIT 883
                    IP+WF +Q+ G +I+
Sbjct: 847 FHFPNTTGRIPDWFEHQSRGETIS 870


>gi|357500105|ref|XP_003620341.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495356|gb|AES76559.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1047

 Score =  349 bits (895), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 238/669 (35%), Positives = 364/669 (54%), Gaps = 65/669 (9%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + SR + ++ L+D GS     M+G+ G GGLGK+T+ + +Y+ I+ EFE S FL+NVRE 
Sbjct: 199 LQSRVQHVKSLLDEGSDHGAHMVGLYGTGGLGKSTLGKAIYNFIADEFECSCFLENVREN 258

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+   L  LQ +LL + L+L +  +  V +GI  +  RL  KK+LL++DDV D++QLQ+L
Sbjct: 259 SASNKLKHLQEELLLKTLQL-EIKLGGVSEGISHIKERLHSKKILLILDDVDDMEQLQAL 317

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG GSR+IIT+RD+HLL++HG++  ++  GL   EAL+L    AFK  +     
Sbjct: 318 AGEPDWFGLGSRVIITTRDKHLLRSHGIESTHEVEGLYGTEALELLRWMAFKNNKVPSSY 377

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R + YA GLPL LE++GS L G++++EW+ TL+  E  P  +I +IL++S+D L+
Sbjct: 378 EDVLNRAVSYASGLPLVLEIVGSNLFGKTIEEWKGTLDGYEKIPNKKIHEILKVSYDALE 437

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVI-GIRVLIEKCLITVHN------NTL 292
           E ++ +FLDIAC FKG         L     H +   + VL EK L+ + +      N L
Sbjct: 438 EEQQSVFLDIACCFKGCGWKEFEYILRAHYGHRITHHLVVLAEKSLVKITHPHYGSINEL 497

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            +HDL++E+G+++V+++SP+E G+RSRLW E+++ +VL E+TGT  +E I + N+  E E
Sbjct: 498 TLHDLIKEMGKEVVRQESPKEPGERSRLWCEDDIVNVLKENTGTSKIEMIYM-NFPSE-E 555

Query: 353 VYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
             +    KAF KMT L+ L I N+    GL+YL + LR+L  RG                
Sbjct: 556 FVIDKKGKAFKKMTRLKTLIIENVHFSKGLKYLPSSLRVLKLRG---------------- 599

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
               C S         K    +K++ L   E L  +PD +G  NLEK   E C  L  IH
Sbjct: 600 ----CLSESLISCSLSKKFQNMKILTLDRCEYLTHIPDVSGLQNLEKFSFEYCENLITIH 655

Query: 473 PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
            S+   NKL  L+   C+ L   P                P    GL  L+ L++S    
Sbjct: 656 NSIGHLNKLERLSANGCSKLERFP----------------PL---GLASLNELNISYCES 696

Query: 533 FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE----------I 582
            + FP+++  M ++  + L+ T+IR LP S + L+ L LL L  C  L           I
Sbjct: 697 LKSFPKLLCKMTNMKMIWLQKTSIRELPSSFQNLNELFLLTLWECGMLRFPKQNDQMYSI 756

Query: 583 LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL 642
           +   V+NL  L   KLS     +  P  ++   +++ L L   + K +P  +     L +
Sbjct: 757 VFSKVTNL-ILHDCKLSD----ECLPIFLKWCVNVTSLDLSYNNFKLIPECLSECHLLNI 811

Query: 643 LNLSDCKNL 651
           L L +CK+L
Sbjct: 812 LILDNCKSL 820



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 123/254 (48%), Gaps = 14/254 (5%)

Query: 565 LLSGLVLLNLKNCRSLEILPVTVSN-LKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-FL 622
           L S L +L L+ C S  ++  ++S   + ++ L L  C  L   P+ V  +++L +  F 
Sbjct: 588 LPSSLRVLKLRGCLSESLISCSLSKKFQNMKILTLDRCEYLTHIPD-VSGLQNLEKFSFE 646

Query: 623 DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
              ++  + +SI  L KLE L+ + C  L R P   + L SL  LN+S C  L++ P+ L
Sbjct: 647 YCENLITIHNSIGHLNKLERLSANGCSKLERFPP--LGLASLNELNISYCESLKSFPKLL 704

Query: 683 GQIESLEELDISGTAV---PHSTSWYSYIPINLMRKSVALKLPSLSG------LCSLRKL 733
            ++ +++ + +  T++   P S    + + +  + +   L+ P  +          +  L
Sbjct: 705 CKMTNMKMIWLQKTSIRELPSSFQNLNELFLLTLWECGMLRFPKQNDQMYSIVFSKVTNL 764

Query: 734 NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
            L DC L +  LP  +    ++  L LS N+F  +P  ++    L  + L++CK L+ + 
Sbjct: 765 ILHDCKLSDECLPIFLKWCVNVTSLDLSYNNFKLIPECLSECHLLNILILDNCKSLEEIR 824

Query: 794 QLPPNIRQVRVNGC 807
            +PPN+  +   GC
Sbjct: 825 GIPPNLEMLSAMGC 838


>gi|297790458|ref|XP_002863119.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308943|gb|EFH39378.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1121

 Score =  349 bits (895), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 258/741 (34%), Positives = 391/741 (52%), Gaps = 55/741 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M +  +K+  L+   S +VRMIGI G  G+GKTTIARVVY+ +S  F+ S F++++    
Sbjct: 240 MTAHLKKMEPLLCLDSDEVRMIGIWGPSGIGKTTIARVVYNKLSSSFQLSVFMESIEAKY 299

Query: 61  SK------GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
           ++         + LQ+Q +SQ+   +   I      + ++  RL+ KKVL+V+D V    
Sbjct: 300 TRPCSDDYSAKLQLQQQFMSQITNQSGMKI----SHLGVVQDRLKDKKVLVVLDGVDKSM 355

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL ++A    WFG GS+IIIT++D  + + HG++ +YK    + DEALQ+    AF    
Sbjct: 356 QLDAMAKETWWFGPGSQIIITAQDRKIFREHGINHIYKVGFPSTDEALQILCTYAFGQKS 415

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           P     +L+  +   AG LPL L V+GS+  G S  EW   L RL     ++IL IL+ S
Sbjct: 416 PKHGFEELAWEVTHLAGELPLGLRVMGSYFRGMSKLEWTKALPRLRSSLDADILSILKFS 475

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
           +D L + +K +FL IACFF       V  +L          +  L EK LI++++  + M
Sbjct: 476 YDALDDEDKYLFLHIACFFNYKRIGRVEEYLAETFLDVSHRLNGLAEKSLISMNDGVIIM 535

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLT-ESTGTELVEGIVLDNYHHENEV 353
           HDLL +LG  IV++QS  E G+R  L    E+C VL  ++ G+  V GI  +   +  + 
Sbjct: 536 HDLLVKLGIDIVRKQSLREPGQRLFLVDAREICEVLNLDANGSRSVIGINYNFGGNRIKE 595

Query: 354 YLCASAKAFSKMTNLRLLKI----CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMD 409
            L  S +AF  M+NL+ L++      + LP+GLEY+S +LRLL W  +P+  LP     D
Sbjct: 596 KLHLSERAFQGMSNLQFLRVKGNNNTIHLPHGLEYISRKLRLLDWTYFPMTCLPPIFNTD 655

Query: 410 KTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLY 469
             +E+ M  S++ +LW+GIK L  LK M LS S  L  +PD + A NL  L L  C+ L 
Sbjct: 656 FLVELDMRCSKLEKLWEGIKPLPNLKRMDLSSSLLLKELPDLSTATNLRTLNLRYCSSLM 715

Query: 470 EIHPSLLLHNKLIILNMKDCTSLITLPGKI-LMKSLEKLNLKS------LPTTISGLKCL 522
            +  S+     L +L +  C+SL+ LP  I  + +L++L+L S      LP +I  L  L
Sbjct: 716 NLPSSIGNATNLELLYLGGCSSLVELPSSIGNLINLKELDLSSLSCLVELPFSIGNLINL 775

Query: 523 STLDVSGDLKFREFPEIVEHMEHLSELHL-EGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
             L++S      E P  + +  +L  L+L + + +  LP SI  L  L  LNL+ C  LE
Sbjct: 776 KVLNLSSLSCLVELPFSIGNATNLEVLNLRQCSNLVKLPFSIGNLQKLQTLNLRGCSKLE 835

Query: 582 ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLE 641
           +LP  +  L  L SL L+ C  LK+FPEI     ++  ++L GT+I+EVPSSI+  ++  
Sbjct: 836 VLPANI-KLGSLWSLDLTDCILLKRFPEI---STNVGFIWLIGTTIEEVPSSIKSWSRPN 891

Query: 642 LLNLSDCKNLVRLPSSIIALKSLKTLN--------------------LSGCFKLENVPET 681
            +++S  +NL   P +   +  L+  N                    L GC KL ++P+ 
Sbjct: 892 EVHMSYSENLKNFPHAFDIITRLQVTNTEIQEVPPWVNKFSRLTVLKLKGCKKLVSLPQI 951

Query: 682 LGQI--------ESLEELDIS 694
              I        ESLE LD S
Sbjct: 952 PDSISDIDAEDCESLERLDCS 972



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 158/360 (43%), Gaps = 74/360 (20%)

Query: 567  SGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS 626
            + L  LNL+ C SL  LP ++ N   L  L L GCS L + P  + ++ +L EL L   S
Sbjct: 701  TNLRTLNLRYCSSLMNLPSSIGNATNLELLYLGGCSSLVELPSSIGNLINLKELDLSSLS 760

Query: 627  -IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI 685
             + E+P SI  L  L++LNLS    LV LP SI    +L+ LNL  C  L  +P ++G +
Sbjct: 761  CLVELPFSIGNLINLKVLNLSSLSCLVELPFSIGNATNLEVLNLRQCSNLVKLPFSIGNL 820

Query: 686  ESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEG-- 743
            + L+ L++ G       S    +P N+              L SL  L+LTDC L++   
Sbjct: 821  QKLQTLNLRG------CSKLEVLPANI-------------KLGSLWSLDLTDCILLKRFP 861

Query: 744  -----------------ALPSDIGNLCSLKELYLS---------------------KNSF 765
                              +PS I +     E+++S                         
Sbjct: 862  EISTNVGFIWLIGTTIEEVPSSIKSWSRPNEVHMSYSENLKNFPHAFDIITRLQVTNTEI 921

Query: 766  VSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDST 825
              +P  +   S+L  ++L+ CK+L SLPQ+P +I  +    C SL  L      C   + 
Sbjct: 922  QEVPPWVNKFSRLTVLKLKGCKKLVSLPQIPDSISDIDAEDCESLERL-----DCSFHNP 976

Query: 826  MIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQN-EGSSITV 884
             I     LK     +  F + +E  + +  T    S V+PG E+P +F +Q+  G S+T+
Sbjct: 977  NIW----LKF----AKCFKLNQEARDLIIQTPTSKSAVLPGREVPAYFTHQSTTGGSLTI 1028


>gi|238481454|ref|NP_198822.3| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007123|gb|AED94506.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 968

 Score =  348 bits (894), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 254/727 (34%), Positives = 379/727 (52%), Gaps = 80/727 (11%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL---------- 65
           S +VRM+GI G  G+GKTTIAR ++  +S  F  S ++D      S              
Sbjct: 9   SKEVRMVGIWGPSGIGKTTIARALFARLSRHFHCSVYIDRAFVSKSMASYSRANPDDYNM 68

Query: 66  -VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNRE 124
            + LQ   LS +L   +  I    D +  LG RL+ +KVLL IDD+     L +LAG  +
Sbjct: 69  KLHLQETFLSTILGKQNIKI----DHLGALGERLKHQKVLLFIDDLDQQVVLNALAGQIQ 124

Query: 125 WFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSA 184
           WFGSGSRII+ + D+HLL +HG++ +Y+    + + AL++    AF+   P     +L+ 
Sbjct: 125 WFGSGSRIIVVTNDKHLLISHGIENIYQVCLPSKELALEMLCRYAFRQNTPPDGFKKLAV 184

Query: 185 RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL-QELEK 243
            ++R+AG LPL L VLGS+L GR+   W   L RL      +I   L++ +DGL  + ++
Sbjct: 185 EVVRHAGILPLGLNVLGSYLRGRNKRYWMDMLPRLRKGLDGKIQKALRVGYDGLDNKKDE 244

Query: 244 KIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQ 303
            IF  IAC F     + +   L     +  IG+  L++K L+ V +N + MH LLQE+G+
Sbjct: 245 AIFRHIACLFNFEKVNDIRLLLADSDLNFNIGLENLVDKSLVNVRSNIVEMHCLLQEMGR 304

Query: 304 QIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFS 363
           +IV+ QS  E G+R  L   E++C VL ++ GT+ + GI LD    ++E  L    KAF 
Sbjct: 305 EIVRAQS-NEAGEREFLMDTEDICDVLDDNIGTKKMLGISLDVDEIDHE--LNVHEKAFQ 361

Query: 364 KMTNLRLLKI----------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
            M NLR L I            L LP   +YL  +L+LL W  YP++ LPS+ + +  ++
Sbjct: 362 GMRNLRFLNIYTKALMSGQKIRLHLPENFDYLPPKLKLLCWDKYPMRCLPSSFRPENLVK 421

Query: 414 IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
           + M  S + +LW+G+  L  LK M L  S+NL  +PD + A NL+ L L+ C+ L +I  
Sbjct: 422 LKMQESELEKLWEGVGSLTCLKDMDLEKSKNLKEIPDLSMATNLKTLNLKYCSSLVKISS 481

Query: 474 SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKS------LPTTISGLKCLSTLDV 527
           S+   NKL  LNM+ CT+L TLP  I +KSL +L+L+        P   + +  L  LD 
Sbjct: 482 SIQNLNKLTKLNMEGCTNLETLPAGINLKSLHRLDLRGCSRLRMFPDISNNISVL-FLDK 540

Query: 528 SGDLKFREFPEIVEHMEHLSELHL---------EGT------------------------ 554
           +      EFP  + H++ L +L +         EG                         
Sbjct: 541 TS---IEEFPSNL-HLKKLFDLSMQQMNSEKLWEGVQPLTCLMKMLSPPLAKNFNTLYLS 596

Query: 555 ---AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIV 611
              ++  LP  I+ L  L+ L+++ C++LE LP T +N K L  L LSGCSKL+ FP+I 
Sbjct: 597 DIPSLVELPCGIQNLKKLMELSIRRCKNLESLP-TGANFKYLDYLDLSGCSKLRSFPDIS 655

Query: 612 RSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSG 671
            +   +S L L+ T I+EVPS IE   +L  L + +C  L  +  +I  LK L   + S 
Sbjct: 656 ST---ISCLCLNRTGIEEVPSWIENFVRLTYLTMLECNKLKYVSLNIFKLKHLDKADFSD 712

Query: 672 CFKLENV 678
           C  L  V
Sbjct: 713 CGTLTEV 719



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 128/544 (23%), Positives = 225/544 (41%), Gaps = 94/544 (17%)

Query: 496 PGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLE-GT 554
           P  ++   +++  L+ L   +  L CL  +D+      +E P++     +L  L+L+  +
Sbjct: 416 PENLVKLKMQESELEKLWEGVGSLTCLKDMDLEKSKNLKEIPDL-SMATNLKTLNLKYCS 474

Query: 555 AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
           ++  +  SI+ L+ L  LN++ C +LE LP  + NLK L  L L GCS+L+ FP+I    
Sbjct: 475 SLVKISSSIQNLNKLTKLNMEGCTNLETLPAGI-NLKSLHRLDLRGCSRLRMFPDIS--- 530

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLEL-------------------------------- 642
            ++S LFLD TSI+E PS++ L    +L                                
Sbjct: 531 NNISVLFLDKTSIEEFPSNLHLKKLFDLSMQQMNSEKLWEGVQPLTCLMKMLSPPLAKNF 590

Query: 643 --LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
             L LSD  +LV LP  I  LK L  L++  C  LE++P T    + L+ LD+SG +   
Sbjct: 591 NTLYLSDIPSLVELPCGIQNLKKLMELSIRRCKNLESLP-TGANFKYLDYLDLSGCSKLR 649

Query: 701 STSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
           S                    P +S   S   LN T        +PS I N   L  L +
Sbjct: 650 S-------------------FPDISSTISCLCLNRTGIE----EVPSWIENFVRLTYLTM 686

Query: 761 ---SKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDAL 817
              +K  +VSL  +I  L  L   +  DC  L  +      I        A+   +   L
Sbjct: 687 LECNKLKYVSL--NIFKLKHLDKADFSDCGTLTEVSWCNKTISV----AAATADNIQPKL 740

Query: 818 KLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQN 877
            + ++ S++      ++ +      F + +E L  +       S+++ G E+P +F ++ 
Sbjct: 741 LVSEASSSLCVQKSVVRFIN----CFKLDQEAL--LQQEPVFKSLILGGEEVPAYFNHRA 794

Query: 878 EGSSITVT-RPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGI 936
            G+S+ +   P+++      +G+  C +  V   S            Q++C      +  
Sbjct: 795 TGNSLVIPLVPTSI--SLDFLGFRACALVDVKAMS-----MPGRVDIQVSCR-----FRG 842

Query: 937 GFRDKFGQAGSDHLWLLY--LSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVK 994
             ++ F  A   H  + +   S    +D R  L ++  P    H++++F        ++ 
Sbjct: 843 SLKNHFDSADHSHSLVAFHKASHLLIFDCRFALNNDSNPLNYAHMDITFHLTTDSVSKIN 902

Query: 995 MCGL 998
            CG+
Sbjct: 903 ACGI 906


>gi|356559294|ref|XP_003547935.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1075

 Score =  348 bits (894), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 264/700 (37%), Positives = 384/700 (54%), Gaps = 49/700 (7%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYD--LISHEFEASGFLDNVR 57
           ++SR   +R L+D+GS D V MIGI GMGG+GK+T+AR VY+  +I+ +F+   FL NVR
Sbjct: 192 LESRVLHVRSLLDAGSDDGVHMIGIHGMGGIGKSTLARAVYNELIIAEKFDGLCFLANVR 251

Query: 58  EISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
           E S K GL  LQ +LL ++L   + S+ +   GI ++ SRL  KK+LL++DDV   +QLQ
Sbjct: 252 ENSDKHGLERLQEKLLLEILGEKNISLTSKEQGIPIIESRLTGKKILLILDDVDKREQLQ 311

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
           ++AG   WFG GS+IIIT+RD+ LL +H V + Y+   L+  +ALQL   +AFK  +   
Sbjct: 312 AIAGRPGWFGPGSKIIITTRDKQLLTSHEVYKKYELKELDEKDALQLLTWEAFKKEKACP 371

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
             V++  R++ YA GLPL L+V+GS L G+S+ EW S +++ +  P  EILDIL++SFD 
Sbjct: 372 TYVEVLHRVVTYASGLPLVLKVIGSHLVGKSIQEWESAIKQYKRIPKKEILDILRVSFDA 431

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFL----EGCGFHPVIGIRVLIEKCLITVH--NNT 291
           L+E EKK+FLDIAC FKG     V + L    + C  H    I VL+ K LI V   ++ 
Sbjct: 432 LEEEEKKVFLDIACCFKGWRLKEVEHILRDGYDDCMKH---HIGVLVGKSLIKVSGWDDV 488

Query: 292 LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
           + MHDL+Q++G++I Q +S E+ GKR RLW  +++  VL  ++G+  +E I LD    E 
Sbjct: 489 VNMHDLIQDMGKRIDQ-ESSEDPGKRRRLWLTKDIIEVLEGNSGSREIEMICLDLSLSEK 547

Query: 352 EVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           E  +     AF KM NL++L I N +   G  Y    LRLL W  YP   LPSN    K 
Sbjct: 548 EATIEWEGDAFKKMKNLKILIIRNGKFSKGPNYFPESLRLLEWHRYPSNCLPSNFP-PKE 606

Query: 412 IEI----YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
           + I      C +  G      K    LKV+  +  E L  + D +  PNLE+L  +GC  
Sbjct: 607 LAICKLPQSCITSFG-FHGSRKKFRNLKVLKFNKCEFLTEIHDVSDLPNLEELSFDGCGN 665

Query: 468 LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDV 527
           L  +H S+   +KL ILN   C  L T P          LNL S          L TL +
Sbjct: 666 LITVHHSIGFLSKLKILNATGCRKLTTFP---------PLNLTS----------LETLQL 706

Query: 528 SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
           S       FPEI+  M++L+ L L    ++ LP+S + L GL  L+L +C  L +LP  +
Sbjct: 707 SSCSSLENFPEILGEMKNLTSLKLFDLGLKELPVSFQNLVGLKTLSLGDCGIL-LLPSNI 765

Query: 588 SNLKCLRSLKLSGCSKLKKFPEIVRSMK-------DLSELFLDGTSIKE--VPSSIELLT 638
             +  L  L    C  L+      R  K       ++    ++G ++ +    +    L 
Sbjct: 766 VMMPKLDILWAKSCEGLQWVKSEEREEKVGSIVCSNVYHFSVNGCNLYDDFFSTGFVQLD 825

Query: 639 KLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
            ++ L+L D  N   LP SI  L+ L+ L++SGC  L+ +
Sbjct: 826 HVKTLSLRD-NNFTFLPESIKELQFLRKLDVSGCLHLQEI 864



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 148/346 (42%), Gaps = 72/346 (20%)

Query: 540 VEHMEHLSELHLEGTA-IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKL 598
           V  + +L EL  +G   +  +  SI  LS L +LN   CR L   P    NL  L +L+L
Sbjct: 649 VSDLPNLEELSFDGCGNLITVHHSIGFLSKLKILNATGCRKLTTFPPL--NLTSLETLQL 706

Query: 599 SGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSI 658
           S CS L+ FPEI+  MK+L+ L L    +KE+P S + L  L+ L+L DC  ++ LPS+I
Sbjct: 707 SSCSSLENFPEILGEMKNLTSLKLFDLGLKELPVSFQNLVGLKTLSLGDC-GILLLPSNI 765

Query: 659 IALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVA 718
           + +  L  L    C       E L  ++S E  +  G+ V                    
Sbjct: 766 VMMPKLDILWAKSC-------EGLQWVKSEEREEKVGSIV-------------------- 798

Query: 719 LKLPSLSGLCS-LRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSK 777
                    CS +   ++  CNL +    +    L  +K L L  N+F  LP SI  L  
Sbjct: 799 ---------CSNVYHFSVNGCNLYDDFFSTGFVQLDHVKTLSLRDNNFTFLPESIKELQF 849

Query: 778 LLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLG 837
           L  +++  C  LQ +  +PPN+++     C SL +                         
Sbjct: 850 LRKLDVSGCLHLQEIRGVPPNLKEFTAGECISLSS------------------------- 884

Query: 838 NKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSIT 883
             SL+  + +E  EA     Q      PG+ IPEWF +Q+   SI+
Sbjct: 885 -SSLSMLLNQELHEAGETMFQ-----FPGATIPEWFNHQSREPSIS 924


>gi|357456931|ref|XP_003598746.1| Resistance protein [Medicago truncatula]
 gi|355487794|gb|AES68997.1| Resistance protein [Medicago truncatula]
          Length = 797

 Score =  348 bits (893), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 215/562 (38%), Positives = 322/562 (57%), Gaps = 54/562 (9%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGI 91
           K+T AR V++LI  +FE+  FL  +RE +   GL  LQ  LLS++L   D  + +V+ GI
Sbjct: 93  KSTTARAVHNLIVDQFESVCFLAGIRERAINHGLAHLQETLLSEILGEKDIKVGDVYRGI 152

Query: 92  DMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVY 151
            ++  RLQRKKVLL++DDV  V+ L++LAG  +WFG G++IIIT+RD+HLL THG+ +VY
Sbjct: 153 SIIKRRLQRKKVLLILDDVDKVEHLRALAGGHDWFGLGTKIIITTRDKHLLATHGIVKVY 212

Query: 152 KPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDE 211
           K   L  ++A +LF                     I Y  GLPLALEV+GS   G+S+D 
Sbjct: 213 KVKELKNEKAFELF---------------------ISYCHGLPLALEVIGSRFFGKSLDV 251

Query: 212 WRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFH 271
           W+S+L++ E     +I +IL++S+D L E EK IFLDIACFF      YV   L   GFH
Sbjct: 252 WKSSLDKYERVLRKDIHEILKVSYDDLDEDEKGIFLDIACFFNSYKIGYVKELLYLHGFH 311

Query: 272 PVIGIRVLIEKCLITVHNNT-LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVL 330
              GI+VL +K LI +  N+ + MHDL+Q +G++IV+++S  E G+RSRLW  +++ HVL
Sbjct: 312 ADDGIQVLTDKSLIKIDANSCVRMHDLIQGMGREIVRQESTLEPGRRSRLWFSDDIFHVL 371

Query: 331 TESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLR 390
            E+ GT+ +E +++ N H + +V  C   KAF +M NLR+L I N       + L N LR
Sbjct: 372 EENKGTDTIE-VIITNLHKDRKVKWC--GKAFGQMKNLRILIIRNAGFSIDPQILPNSLR 428

Query: 391 LLGWRGY-----PLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENL 445
           +L W GY     P  F P NL +    +   C  R    +K +   + L  +     + L
Sbjct: 429 VLDWSGYESFSLPFDFNPKNLVIHSLRD--SCLKR----FKSLNVFETLSFLDFEDCKFL 482

Query: 446 IRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLE 505
             +P  +  PNL+ L L+ CT L++IH S+   +KL++L+ K C  L +L   + + SLE
Sbjct: 483 TEIPSLSRVPNLKSLWLDYCTNLFKIHDSVGFLDKLVLLSAKGCIQLESLVPCMNLPSLE 542

Query: 506 KLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIEL 565
           KL+L+                  G  +   FPE++  ME+L +++L+ T +  LP +   
Sbjct: 543 KLDLR------------------GCSRLASFPEVLGVMENLKDVYLDETDLYQLPFTFGN 584

Query: 566 LSGLVLLNLKNCRSLEILPVTV 587
           L GL  L L++C+ +  +P  V
Sbjct: 585 LVGLQRLFLRSCQRMIQIPSYV 606



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 6/166 (3%)

Query: 496 PGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKF-REFPEIVEHMEHLSELHLEG- 553
           P  +++ SL    LK   + ++  + LS LD   D KF  E P +   + +L  L L+  
Sbjct: 446 PKNLVIHSLRDSCLKRFKS-LNVFETLSFLDFE-DCKFLTEIPSL-SRVPNLKSLWLDYC 502

Query: 554 TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRS 613
           T +  +  S+  L  LVLL+ K C  LE L V   NL  L  L L GCS+L  FPE++  
Sbjct: 503 TNLFKIHDSVGFLDKLVLLSAKGCIQLESL-VPCMNLPSLEKLDLRGCSRLASFPEVLGV 561

Query: 614 MKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSII 659
           M++L +++LD T + ++P +   L  L+ L L  C+ ++++PS ++
Sbjct: 562 MENLKDVYLDETDLYQLPFTFGNLVGLQRLFLRSCQRMIQIPSYVL 607



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 22/199 (11%)

Query: 633 SIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD 692
           S+ +   L  L+  DCK L  +PS +  + +LK+L L  C  L  + +++G ++ L  L 
Sbjct: 464 SLNVFETLSFLDFEDCKFLTEIPS-LSRVPNLKSLWLDYCTNLFKIHDSVGFLDKLVLLS 522

Query: 693 ISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNL 752
             G          S +P         + LPSL       KL+L  C+ +  + P  +G +
Sbjct: 523 AKGC-----IQLESLVP--------CMNLPSLE------KLDLRGCSRL-ASFPEVLGVM 562

Query: 753 CSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ-LPPNIRQVRVNGCASLV 811
            +LK++YL +     LP +  +L  L  + L  C+R+  +P  + P +  V  +    + 
Sbjct: 563 ENLKDVYLDETDLYQLPFTFGNLVGLQRLFLRSCQRMIQIPSYVLPKVEIVTSHHRRGVR 622

Query: 812 TLLDALKLCKSDSTMIACL 830
           +  DA K+    S    C+
Sbjct: 623 SSNDAAKVSPKVSANAMCV 641



 Score = 45.1 bits (105), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 3/108 (2%)

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDC 648
            + L  L    C  L + P + R + +L  L+LD  T++ ++  S+  L KL LL+   C
Sbjct: 468 FETLSFLDFEDCKFLTEIPSLSR-VPNLKSLWLDYCTNLFKIHDSVGFLDKLVLLSAKGC 526

Query: 649 KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
             L  L   +  L SL+ L+L GC +L + PE LG +E+L+++ +  T
Sbjct: 527 IQLESLVPCM-NLPSLEKLDLRGCSRLASFPEVLGVMENLKDVYLDET 573


>gi|227438285|gb|ACP30632.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1238

 Score =  348 bits (893), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 243/686 (35%), Positives = 368/686 (53%), Gaps = 55/686 (8%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
           +R +GI GM G+GKTT+A+ V+D IS  +EA  F+ +  +  ++ GL  L  +    +L 
Sbjct: 221 IRRLGIWGMPGIGKTTLAKAVFDQISGGYEAFFFIKHFDKAFNEKGLHCLLEEHFGNIL- 279

Query: 79  LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
           +    + +        G  L +K+ L+V+DDV +    +S  G   WFG GS IIITSRD
Sbjct: 280 MDLPRVCSSITRPSFPGDILSKKRTLVVLDDVQNPLVAESFLGGFHWFGPGSLIIITSRD 339

Query: 139 EHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALE 198
           + + +   ++ VY+   LN +EALQLF+  A       ++ ++LS  +I YA G PLAL 
Sbjct: 340 KQVFRHCQINHVYEVQSLNENEALQLFSHHAIGENIREKKFMKLSMEVIDYASGNPLALS 399

Query: 199 VLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDR 258
             G  L G+ + E R+T  + ++  P +I D+ + S++ L + EK IFLDIACFFKG + 
Sbjct: 400 YYGKELKGKKLSEMRTTFLKHKLRTPYKIQDLFKRSYEALNDSEKNIFLDIACFFKGENV 459

Query: 259 DYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRS 318
           DYV   LEGCGF P IGI VL+EKCL+T+  N + MH ++Q+ G++I+  +   ++ +R 
Sbjct: 460 DYVMQLLEGCGFLPHIGIDVLVEKCLVTISENRVKMHRIIQDFGREIINGEVV-QIERRR 518

Query: 319 RLWK-------------EEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKM 365
           RLW+             +  V    T   GT  +EGI LD  +   +V     + AF  M
Sbjct: 519 RLWEPWTIKFLLEDDKLKANVKSTYTRPLGTVDIEGIFLDASNLSFDV----KSGAFKHM 574

Query: 366 TNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
            +LR LKI          + LP GL+ L   LRLL W  YPLK LP        +E+ + 
Sbjct: 575 LSLRFLKIYCSSYEKDSRVLLPKGLDSLPYELRLLHWENYPLKSLPQKFDPCHLVELNLS 634

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
           YS++ +LW G K+L  LKV+ L HS+ L  + D   A +LE L L+GCT+L    P++  
Sbjct: 635 YSQLQKLWGGTKNLKMLKVVRLCHSQQLTDINDLCKAQDLELLDLQGCTQLQSF-PAMGQ 693

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCL--STLDVSGDLKF-R 534
              L ++N+  CT + + P           N+K L    +G++ L  ST+ +S  +K  R
Sbjct: 694 LRLLRVVNLSGCTEIRSFPEV-------SPNIKELHLQGTGIRELPVSTVTLSSQVKLNR 746

Query: 535 EFPEIVEHMEHLSEL--HLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKC 592
           E   ++     +S++  H   T++     + + L  LV LN+K+C  L  LP  +++L+ 
Sbjct: 747 ELSNLLTEFPGVSDVINHERLTSLIKPVSANQHLGKLVRLNMKDCVHLTSLP-DMADLEL 805

Query: 593 LRSLKLSGCSKL---KKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK 649
           L+ L LSGCS L   + FP      ++L EL+L GT+IKE P   +L   LE+LN   C 
Sbjct: 806 LQVLDLSGCSNLNDIQGFP------RNLEELYLAGTAIKEFP---QLPLSLEILNAHGCV 856

Query: 650 NLVRLPSSIIALKSLKTLNLSGCFKL 675
           +L+ +P     L    T   S CF L
Sbjct: 857 SLISIPIGFEQLPRYYT--FSNCFGL 880



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 112/265 (42%), Gaps = 59/265 (22%)

Query: 549 LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
           LH E   ++ LP   +    LV LNL   + L+ L     NLK L+ ++L    +L    
Sbjct: 609 LHWENYPLKSLPQKFDPCH-LVELNLSYSQ-LQKLWGGTKNLKMLKVVRLCHSQQLTDIN 666

Query: 609 EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
           ++ ++                          LELL+L  C  L   P+ +  L+ L+ +N
Sbjct: 667 DLCKAQD------------------------LELLDLQGCTQLQSFPA-MGQLRLLRVVN 701

Query: 669 LSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLC 728
           LSGC ++ + PE    I+   EL + GT +         +P+            S   L 
Sbjct: 702 LSGCTEIRSFPEVSPNIK---ELHLQGTGIRE-------LPV------------STVTLS 739

Query: 729 SLRKLNLTDCNLM-EGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCK 787
           S  KLN    NL+ E    SD+ N   L        S +   ++  HL KL+ + ++DC 
Sbjct: 740 SQVKLNRELSNLLTEFPGVSDVINHERL-------TSLIKPVSANQHLGKLVRLNMKDCV 792

Query: 788 RLQSLPQLPP-NIRQV-RVNGCASL 810
            L SLP +    + QV  ++GC++L
Sbjct: 793 HLTSLPDMADLELLQVLDLSGCSNL 817


>gi|357515097|ref|XP_003627837.1| NBS resistance protein [Medicago truncatula]
 gi|355521859|gb|AET02313.1| NBS resistance protein [Medicago truncatula]
          Length = 1731

 Score =  348 bits (893), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 229/674 (33%), Positives = 372/674 (55%), Gaps = 25/674 (3%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D     ++ L+   S+ V++IGI GMGG GKTT+A +++   S ++E S   + V E+S
Sbjct: 195 LDENYWSIQSLIKFDSAQVQIIGIWGMGGTGKTTLASILFQRFSFKYEGSCLFEKVTEVS 254

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            + G+     +LLS+LL+  D  I +      M+  RL+  K  +V+DDV + + LQ+L 
Sbjct: 255 KRHGINYACNKLLSKLLR-EDLDIDSPKLIPSMIRRRLKSMKSFIVLDDVHNSELLQNLI 313

Query: 121 G-NREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           G    W GSGS +I+T+RD+H+L + G+D++Y+   +N   +++LF+M AF    P    
Sbjct: 314 GVGHGWLGSGSTVIVTTRDKHVLISGGIDKIYEVKKMNSRNSVKLFSMNAFDKVSPKDGY 373

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V+LS R + YA G PLAL+VLGS L  +S  EW   L +L+  P +EI  I ++S+D L 
Sbjct: 374 VELSKRAVDYANGNPLALKVLGSLLRCKSEIEWDCALAKLKKIPNNEIDSIFRLSYDELD 433

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLL 298
           + EK IFLDIACFFKG++R+ +T  L  CGF   IGI  L++K L+ V + N + MHDL+
Sbjct: 434 DKEKDIFLDIACFFKGHERNSITKILNECGFFADIGISHLLDKALVRVDSKNCIQMHDLI 493

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           QE+G+QIV+ +S +  G+RSRL   +EV  VL  + G++ VE I  D        ++   
Sbjct: 494 QEMGKQIVREESHKNPGQRSRLCDPKEVYDVLKNNRGSKNVEAIFFDATQC---THVNLR 550

Query: 359 AKAFSKMTNLRLLK------ICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
              F KM NLRLL       + ++ LP+GL  L   LR   W GYPLK LP    ++  +
Sbjct: 551 PDTFEKMKNLRLLAFQDQKGVKSVSLPHGLGLLPENLRYFLWDGYPLKTLPPTFCLEMLV 610

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
           E+ +  S + +LW G+ ++  L+ + LS S  LI  P+ +G+PNL+ ++L+ C  + E+ 
Sbjct: 611 ELSLTGSLVEKLWNGVLNVPNLEKIDLSGSTKLIECPNVSGSPNLKYVLLDECESMPEVD 670

Query: 473 PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLPTTISGLKCLSTLD 526
            S+    KL +LN+  CTSL ++       +L +L      NLK L      L  L  L 
Sbjct: 671 SSIFHLQKLEVLNVSGCTSLKSISSNTCSPALRQLSAINCFNLKDLSVPFDYLDGLG-LS 729

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPV- 585
           ++G     E P  + H ++L       +    + L+   +  + L+  +NC+    + + 
Sbjct: 730 LTG-WDGNELPSSLLHAKNLGNFFFPISDCL-VNLTENFVDRICLVKQRNCQQDPFITLD 787

Query: 586 ---TVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL 642
              T    + +++L       L + P+ +  +  L  L L   +IK +P +++ L +L+ 
Sbjct: 788 KMFTSPGFQSVKNLVFVDIPMLSEIPDSISLLSSLESLILFDMAIKSLPETVKYLPQLKF 847

Query: 643 LNLSDCKNLVRLPS 656
           +++ DCK L  +P+
Sbjct: 848 VDIHDCKLLQSIPA 861



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 149/307 (48%), Gaps = 38/307 (12%)

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           E+L     +G  ++ LP +   L  LV L+L     +E L   V N+  L  + LSG +K
Sbjct: 585 ENLRYFLWDGYPLKTLPPTF-CLEMLVELSLTGSL-VEKLWNGVLNVPNLEKIDLSGSTK 642

Query: 604 LKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
           L + P +  S  +L  + LD   S+ EV SSI  L KLE+LN+S C +L  + S+  +  
Sbjct: 643 LIECPNVSGS-PNLKYVLLDECESMPEVDSSIFHLQKLEVLNVSGCTSLKSISSNTCS-P 700

Query: 663 SLKTLNLSGCFKLENVPETLGQIESLEELDISG-------TAVPHSTSWYSYI-PIN--- 711
           +L+ L+   CF L+++      ++ L  L ++G       +++ H+ +  ++  PI+   
Sbjct: 701 ALRQLSAINCFNLKDLSVPFDYLDGLG-LSLTGWDGNELPSSLLHAKNLGNFFFPISDCL 759

Query: 712 ------------LMRKSVALKLPSLS--------GLCSLRKLNLTDCNLMEGALPSDIGN 751
                       L+++    + P ++        G  S++ L   D  ++   +P  I  
Sbjct: 760 VNLTENFVDRICLVKQRNCQQDPFITLDKMFTSPGFQSVKNLVFVDIPML-SEIPDSISL 818

Query: 752 LCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLV 811
           L SL+ L L   +  SLP ++ +L +L  +++ DCK LQS+P L   I+ + V  C SL 
Sbjct: 819 LSSLESLILFDMAIKSLPETVKYLPQLKFVDIHDCKLLQSIPALSQFIQILVVWNCESLE 878

Query: 812 TLLDALK 818
            +L + +
Sbjct: 879 EVLSSTR 885


>gi|357513731|ref|XP_003627154.1| Nbs-lrr resistance protein [Medicago truncatula]
 gi|355521176|gb|AET01630.1| Nbs-lrr resistance protein [Medicago truncatula]
          Length = 1544

 Score =  348 bits (892), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 244/702 (34%), Positives = 375/702 (53%), Gaps = 73/702 (10%)

Query: 12  MDSGSSDVRM-------IGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGG 64
           +D  S D+ +       IGI GM G+GKTTIA+ ++      ++   FL+ V E S K G
Sbjct: 189 VDENSEDIELLLKTIPRIGIWGMSGIGKTTIAKQMFAKNFAHYDNVCFLEKVSEDSEKLG 248

Query: 65  LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNRE 124
            + ++ QLL +LLK  + +  +V      +  RL RKKV +V+DDV +  QL  L     
Sbjct: 249 PIYVRNQLLRELLK-REITASDVHGLHTFIKRRLFRKKVFIVLDDVDNASQLDDLCRVLG 307

Query: 125 WFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSA 184
             G  SR+IIT+RD H L +  VDE+Y+       ++L+LF+++AFK   PL+     S 
Sbjct: 308 DLGPNSRLIITTRDRHTL-SGKVDEIYEVKTWRLKDSLKLFSLRAFKQDHPLKGYECFSE 366

Query: 185 RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPS--EILDILQISFDGLQELE 242
           R +  AGG+PLALEVLGS    R  + W S L   E +  S  +I  +L+ S++GL   +
Sbjct: 367 RAVECAGGVPLALEVLGSHFHSRKPEFWESELNLYENKGESLPDIQKVLKASYNGLSWRQ 426

Query: 243 KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT-LWMHDLLQEL 301
           K++FLDIA FFKG ++D VT  L+  GF+   GI +L +K LIT+ NN+ + MHDLLQ+L
Sbjct: 427 KEMFLDIAFFFKGENKDIVTRILDAFGFNATSGIEILEDKTLITISNNSRIQMHDLLQKL 486

Query: 302 GQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKA 361
              IV R+   + GKRSRL   +++C VL  + G + +EGI+ D      ++ +   A  
Sbjct: 487 AFDIV-REEYNDRGKRSRLRDAKDICDVLGNNKGNDAIEGIIFD---LSQKLDINVQADT 542

Query: 362 FSKMTNLRLLK---------ICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
           F  MT LR LK         +  + LP  +    ++L  L W GYPLK LP     ++ I
Sbjct: 543 FKLMTKLRFLKFHIPKGKKKLGTVHLPENIMPFFDKLTYLEWNGYPLKSLPEPFHAEQLI 602

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
           +I + +S I  LW G++ L  L+ + LS  + L  +PD +GA  L++L L GC  L E+ 
Sbjct: 603 QISLPHSNIEHLWYGMQELVNLEAIDLSECKQLRHLPDLSGALKLKQLRLSGCEELCEVR 662

Query: 473 PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
           PS    + L  L +  CT L +L G+  + SL+  ++K       G K L    +S D  
Sbjct: 663 PSAFSKDTLDTLLLDRCTKLESLMGEKHLTSLKYFSVK-------GCKSLKEFSLSSD-- 713

Query: 533 FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKC 592
                        ++ L L  T I+ L  SI  ++ L+ LNL++  +L  LP+ +S+L+ 
Sbjct: 714 ------------SINRLDLSKTGIKILHPSIGDMNNLIWLNLEDL-NLTNLPIELSHLRS 760

Query: 593 LRSLKLSGC-----SKLK---------------------KFPEIVRSMKDLSELFLDGTS 626
           L  L++S C     SKL+                     + P  + S++ L EL LDG+S
Sbjct: 761 LTELRVSKCNVVTKSKLEALFEGLTLLRLLHLKDCCNLIELPANISSLESLHELRLDGSS 820

Query: 627 IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
           ++E+P+SI+ L++LE+ +L +C  L  LP   +++K  +  N
Sbjct: 821 VEELPASIKYLSELEIQSLDNCSKLRCLPELPLSIKEFQADN 862



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 146/526 (27%), Positives = 231/526 (43%), Gaps = 89/526 (16%)

Query: 542  HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
            H E L ++ L  + I  L   ++ L  L  ++L  C+ L  LP     LK L+ L+LSGC
Sbjct: 597  HAEQLIQISLPHSNIEHLWYGMQELVNLEAIDLSECKQLRHLPDLSGALK-LKQLRLSGC 655

Query: 602  SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVR-------- 653
             +L +      S   L  L LD  +  E     + LT L+  ++  CK+L          
Sbjct: 656  EELCEVRPSAFSKDTLDTLLLDRCTKLESLMGEKHLTSLKYFSVKGCKSLKEFSLSSDSI 715

Query: 654  ------------LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHS 701
                        L  SI  + +L  LNL     L N+P  L  + SL EL +S       
Sbjct: 716  NRLDLSKTGIKILHPSIGDMNNLIWLNLED-LNLTNLPIELSHLRSLTELRVS------- 767

Query: 702  TSWYSYIPINLMRKSVALKLPSL-SGLCSLRKLNLTDC-NLMEGALPSDIGNLCSLKELY 759
                     N++ KS   KL +L  GL  LR L+L DC NL+E  LP++I +L SL EL 
Sbjct: 768  -------KCNVVTKS---KLEALFEGLTLLRLLHLKDCCNLIE--LPANISSLESLHELR 815

Query: 760  LSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVT------- 812
            L  +S   LP SI +LS+L    L++C +L+ LP+LP +I++ + + C SL+T       
Sbjct: 816  LDGSSVEELPASIKYLSELEIQSLDNCSKLRCLPELPLSIKEFQADNCTSLITVSTLKTF 875

Query: 813  ---LLDALKLCKSDSTMIACLDSLKL--------LGNKSLAFS--MLREY-LEAVSNTRQ 858
               ++   K     ++++  LD   L        L  KS AF   ++R+Y  +  S    
Sbjct: 876  SINMIGQKKYISFKNSIMLELDGPSLDRITEDAMLTMKSAAFHNVLVRKYRFQTHSFNYN 935

Query: 859  HLSVVVPGSEIPEWFMYQN-EGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCF 917
               V +PG  +P    +Q+   SSIT+    N+ N    +G+       V+  S+     
Sbjct: 936  RAEVCLPGRRVPREIKHQSTTSSSITI----NISNS---LGFIFAV---VVSPSKKTQQH 985

Query: 918  GSYPTHQLNCHIGHGIYGIGFRDKFGQA-----GSDHLWLLYLSRQTCYDIRLPLESNLE 972
            G +   +  C+   G   +G++ K+          DH+++ Y      YD  L   S++E
Sbjct: 986  GYFVGMRCQCYTEDGKREVGYKSKWDHKPITSLNMDHVFVWYDPYH--YDSIL---SSIE 1040

Query: 973  PFESNHVNVSFEPWLGQGLE----VKMCGLHPVYMDEVEELDQTTN 1014
               S    ++     G+ L+    +K CG+ P+Y  E   +  T N
Sbjct: 1041 RKISFKFCITTYTSSGKELDGLLSIKECGVCPIYYSESRRVLGTGN 1086


>gi|357499349|ref|XP_003619963.1| Resistance gene analog protein [Medicago truncatula]
 gi|355494978|gb|AES76181.1| Resistance gene analog protein [Medicago truncatula]
          Length = 1247

 Score =  347 bits (891), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 234/629 (37%), Positives = 360/629 (57%), Gaps = 52/629 (8%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + SR  ++  L++  S+D V  IGI G GG+GKTT+A+ VY+ I+ +FE   FL +VRE 
Sbjct: 205 LKSRISEVNSLLELESNDGVWKIGILGTGGMGKTTLAQAVYNSIADQFECKCFLHDVREN 264

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S K GL  LQ QLLS+ ++  +    +V +GI ++  RL +KKVLL+++DV  + QL++L
Sbjct: 265 SLKHGLEFLQEQLLSKSIRF-ETKFGHVNEGIPVIKRRLSQKKVLLILNDVDKLNQLENL 323

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G   W G GSR+IIT+RD+ LL +HG+ ++Y+ +GLN ++AL+L   K FK  +     
Sbjct: 324 VGEPGWLGHGSRVIITTRDKCLLSSHGIKKIYEAYGLNKEQALELVRTKTFKCNKTDASY 383

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R ++YA GLPLALEV+GS L G+S++E  STL++ E  P ++I  IL+IS+D L 
Sbjct: 384 DYILNRAVKYASGLPLALEVVGSNLFGKSIEECESTLDKYERIPHADIQKILRISYDSLD 443

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNN-------T 291
           E ++ +FLDIACFFK ++++Y    L G  G+     I VL++K LI  +++        
Sbjct: 444 EEQQSVFLDIACFFKWHEKEYTQELLHGHYGYCIKSHIGVLVDKSLIKFNSDPNVSEFLA 503

Query: 292 LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
           + +HDL++++G++IV+++S +E G+RSRLW  +++ HVL E+TG+  +E I+L  Y    
Sbjct: 504 VTLHDLIEDMGKEIVRQESIKEPGRRSRLWCCDDIVHVLQENTGSSKIEMIIL-KYRPST 562

Query: 352 EVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           E  +  + KAF KMTNL+ L + +     G +YL + LR+L W G+             T
Sbjct: 563 EPVIDMNEKAFKKMTNLKTLIVEDDNFSKGPKYLPSSLRVLEWSGF-------------T 609

Query: 412 IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
            E   C+S         K  + +K + L  S+ L  + D +G PNLEKL    C  L  I
Sbjct: 610 SESLSCFSN--------KKFNNIKNLTLDGSKYLTHISDVSGLPNLEKLSFHCCHSLITI 661

Query: 472 HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDL 531
           H S+    KL IL+   C  L + P          L L SL   I   +C S        
Sbjct: 662 HNSIGYLIKLEILDAWGCNKLESFP---------PLQLPSLKELILS-RCSS-------- 703

Query: 532 KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
             + FPE++  M ++ E+ L  T+I  LP S + LS L  L++    +L+ILP  +S   
Sbjct: 704 -LKNFPELLCKMTNIEEIELHRTSIGELPSSFKNLSELRHLSISFV-NLKILPECLSECH 761

Query: 592 CLRSLKLSGCSKLKKFPEIVRSMKDLSEL 620
            LR L L GC+ L++   I  ++  LS +
Sbjct: 762 RLRELVLYGCNFLEEIRGIPPNLNYLSAI 790



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 94/223 (42%), Gaps = 38/223 (17%)

Query: 593 LRSLKLSG-------CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNL 645
           LR L+ SG       C   KKF        ++  L LDG+      S +  L  LE L+ 
Sbjct: 600 LRVLEWSGFTSESLSCFSNKKF-------NNIKNLTLDGSKYLTHISDVSGLPNLEKLSF 652

Query: 646 SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWY 705
             C +L+ + +SI  L  L+ L+  GC KLE+ P    Q+ SL+EL +S           
Sbjct: 653 HCCHSLITIHNSIGYLIKLEILDAWGCNKLESFPPL--QLPSLKELILS----------- 699

Query: 706 SYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLME-GALPSDIGNLCSLKELYLSKNS 764
                   R S     P L  LC +  +   + +    G LPS   NL  L+ L +S  +
Sbjct: 700 --------RCSSLKNFPEL--LCKMTNIEEIELHRTSIGELPSSFKNLSELRHLSISFVN 749

Query: 765 FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGC 807
              LP  ++   +L  + L  C  L+ +  +PPN+  +    C
Sbjct: 750 LKILPECLSECHRLRELVLYGCNFLEEIRGIPPNLNYLSAIDC 792


>gi|357456967|ref|XP_003598764.1| Resistance protein [Medicago truncatula]
 gi|355487812|gb|AES69015.1| Resistance protein [Medicago truncatula]
          Length = 1185

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 217/568 (38%), Positives = 336/568 (59%), Gaps = 26/568 (4%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
           V M+GI G+GG+GK+T AR V++LI+ +FE   FLD++R+      L  LQ  LLS +L 
Sbjct: 219 VSMVGIYGIGGIGKSTTARAVHNLIADQFEGVCFLDDIRKREINHDLARLQEALLSDILG 278

Query: 79  LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
             D  + +V+ G+ ++  RLQRKKVLL++D+V  V+QLQ+  G+  WFG GS++I+T+RD
Sbjct: 279 EKDIKVGDVYRGMSIIKRRLQRKKVLLILDNVDKVQQLQAFVGH-GWFGFGSKVIVTTRD 337

Query: 139 EHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC-VQLSARIIRYAGGLPLAL 197
           +HLL THG+ +VY+   L  ++AL+LF+  AFK  + +  C V ++ R++ Y  GLPLAL
Sbjct: 338 KHLLATHGIVKVYEVKQLKSEKALELFSWHAFKN-KKIDPCYVDIAKRLVTYCHGLPLAL 396

Query: 198 EVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGND 257
           EV+GS L G+S+  W+S+L + +     +I +IL++S+D L+E EK IFLDIACFF   +
Sbjct: 397 EVIGSHLFGKSLGVWKSSLVKYKGVLRKDIHEILKVSYDDLEEDEKGIFLDIACFFNSYE 456

Query: 258 RDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPEELGK 316
             YV   L   GFH   GI+VLI+K L+ +  N  + MHDL+Q +G++IV+++S  E G+
Sbjct: 457 ISYVKELLYLHGFHAEDGIQVLIDKSLMKIDINGCVRMHDLIQSMGREIVRQESTLEPGR 516

Query: 317 RSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNL 376
           RSRLW  +++  VL E+ GT+ VE +++ N     +V  C   KAF  M NL++L + N 
Sbjct: 517 RSRLWFSDDIVQVLEENKGTDTVE-VIIANLRKGRKVKWC--GKAFGPMKNLKILIVRNA 573

Query: 377 QLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKV 436
           Q  NG + L N L++L W GYP   LPS     K + I        + ++ +K  + L  
Sbjct: 574 QFSNGPQILPNSLKVLDWSGYPSSSLPSKFN-PKNLAILNLPESHLKWFQSLKVFEMLSF 632

Query: 437 MILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLP 496
           +     + L ++P  +  P L  L L+ C  L  IH S+     L++ + + C+ L +L 
Sbjct: 633 LDFEGCKFLTKLPSLSRVPYLGALCLDYCINLIRIHDSVGFLGSLVLFSAQGCSRLESLV 692

Query: 497 GKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAI 556
             I + SLE                  TLD+ G  +   FPE++  ME++ +++L+ T +
Sbjct: 693 PYINLPSLE------------------TLDLRGCSRLDNFPEVLGLMENIKDVYLDQTDL 734

Query: 557 RGLPLSIELLSGLVLLNLKNCRSLEILP 584
             LP +I  L GL  L L+ C+ +  LP
Sbjct: 735 YQLPFTIGNLVGLQRLYLRGCQRMIQLP 762



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 20/207 (9%)

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
           +L N L +L+     S  +LP K   K+L  LNL       S LK   +L V   L F +
Sbjct: 581 ILPNSLKVLDWSGYPS-SSLPSKFNPKNLAILNLPE-----SHLKWFQSLKVFEMLSFLD 634

Query: 536 FP--EIVEHMEHLSELHLEGTA--------IRGLPLSIELLSGLVLLNLKNCRSLEILPV 585
           F   + +  +  LS +   G          IR +  S+  L  LVL + + C  LE L V
Sbjct: 635 FEGCKFLTKLPSLSRVPYLGALCLDYCINLIR-IHDSVGFLGSLVLFSAQGCSRLESL-V 692

Query: 586 TVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNL 645
              NL  L +L L GCS+L  FPE++  M+++ +++LD T + ++P +I  L  L+ L L
Sbjct: 693 PYINLPSLETLDLRGCSRLDNFPEVLGLMENIKDVYLDQTDLYQLPFTIGNLVGLQRLYL 752

Query: 646 SDCKNLVRLPSSIIALKSLKTLNLSGC 672
             C+ +++LPS I  L  ++ +   GC
Sbjct: 753 RGCQRMIQLPSYI--LPKVEIITTYGC 777



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 12/131 (9%)

Query: 576 NCRSLEILPVTVSNLKCLRSLKL---------SGCSKLKKFPEIVRSMKDLSELFLDG-T 625
           N ++L IL +  S+LK  +SLK+          GC  L K P + R +  L  L LD   
Sbjct: 604 NPKNLAILNLPESHLKWFQSLKVFEMLSFLDFEGCKFLTKLPSLSR-VPYLGALCLDYCI 662

Query: 626 SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI 685
           ++  +  S+  L  L L +   C  L  L    I L SL+TL+L GC +L+N PE LG +
Sbjct: 663 NLIRIHDSVGFLGSLVLFSAQGCSRLESL-VPYINLPSLETLDLRGCSRLDNFPEVLGLM 721

Query: 686 ESLEELDISGT 696
           E+++++ +  T
Sbjct: 722 ENIKDVYLDQT 732



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 22/176 (12%)

Query: 633 SIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD 692
           S+++   L  L+   CK L +LPS +  +  L  L L  C  L  + +++G + SL    
Sbjct: 623 SLKVFEMLSFLDFEGCKFLTKLPS-LSRVPYLGALCLDYCINLIRIHDSVGFLGSLVLFS 681

Query: 693 ISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNL 752
             G +   S   Y  +P                   SL  L+L  C+ ++   P  +G +
Sbjct: 682 AQGCSRLESLVPYINLP-------------------SLETLDLRGCSRLDN-FPEVLGLM 721

Query: 753 CSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ-LPPNIRQVRVNGC 807
            ++K++YL +     LP +I +L  L  + L  C+R+  LP  + P +  +   GC
Sbjct: 722 ENIKDVYLDQTDLYQLPFTIGNLVGLQRLYLRGCQRMIQLPSYILPKVEIITTYGC 777


>gi|15234300|ref|NP_195337.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
 gi|2961373|emb|CAA18120.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|7270566|emb|CAB81523.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|332661224|gb|AEE86624.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
          Length = 1607

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 243/708 (34%), Positives = 378/708 (53%), Gaps = 61/708 (8%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            ++SR  ++  L+      VR IGI GM G+GKTT+A+  +D IS  +EAS F+ +  +  
Sbjct: 584  INSRLLEMEHLLCKQPWGVRRIGIWGMPGIGKTTLAKAFFDQISGGYEASCFIKHFDKAF 643

Query: 61   SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            S  GL  L  +   ++LK     + +      +   +L +K+ L+V+DDV +    +S  
Sbjct: 644  SGKGLHRLLEEHFGKILKELPR-VCSSITRPSLPRDKLSKKRTLVVLDDVHNPLVAESFL 702

Query: 121  GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
                WFG GS IIITSRD+ + +   ++ VY+    N +EALQLF+  AF+     Q  +
Sbjct: 703  EGFHWFGPGSLIIITSRDKQVFRLCQINHVYEVQSFNENEALQLFSQCAFRRDINEQNLL 762

Query: 181  QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            +LS ++I YA G PLAL      L G+ + E  +T  +L+   P +I D+ + S++ L +
Sbjct: 763  ELSLKVIDYASGNPLALSFYCRVLKGKELSEMETTFFKLKQRTPYKIFDLFKSSYETLDD 822

Query: 241  LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             EK IFLDIACFF G + DYV   LEGCGF P +GI VL+E CL+T+  N + MH ++Q+
Sbjct: 823  NEKNIFLDIACFFSGENVDYVMRLLEGCGFFPHVGIDVLVENCLVTISENRVKMHRIIQD 882

Query: 301  LGQQIVQRQSPEELGKRSRL---WK------------EEEVCHVLTESTGTELVEGIVLD 345
             G++I+  ++  ++ +R RL   W              E+     T + GTE +EGI+LD
Sbjct: 883  FGREIIDGETV-QIERRRRLSDPWSIKFLLEDDELEANEDPKATYTRTLGTEDIEGILLD 941

Query: 346  NYHHENEVYLCASAKAFSKMTNLRLLKI-C-------NLQLPNGLEYLSNRLRLLGWRGY 397
              +   +V       AF  M +LR LKI C       +L+LP GL++L + LRLL W  Y
Sbjct: 942  TSNLTFDV----KPGAFENMLSLRFLKIYCSSYENHYSLRLPKGLKFLPDELRLLHWENY 997

Query: 398  PLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNL 457
            PL+ LP +      +E+ + YS++ +LW G K L+ LKV+ L HS+ L  + D   A N+
Sbjct: 998  PLQSLPQDFDPCHLVELNLSYSQLQKLWAGTKSLEMLKVVKLCHSQQLTAIDDILKAQNI 1057

Query: 458  EKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNL-----KSL 512
            E + L+GC +L    P+      L ++N+  C  + + P   +  ++E+L+L     + L
Sbjct: 1058 ELIDLQGCRKLQRF-PATGQLQHLRVVNLSGCREIKSFPE--VSPNIEELHLQGTGIREL 1114

Query: 513  PTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSEL--HLEGTAIRGLPLSIELLSGLV 570
            P +I  L   + L+       RE   ++     +S    + + T++  L  S + L  LV
Sbjct: 1115 PISIVSLFEQAKLN-------RELFNLLPEFSGVSNAWNNEQSTSLAKLVTSTQNLGKLV 1167

Query: 571  LLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKL---KKFPEIVRSMKDLSELFLDGTSI 627
             LN+K+C  L  LP  V + + L+ L LSGCS L   + FP       +L EL+L  T++
Sbjct: 1168 CLNMKDCVHLRKLPYMV-DFESLKVLNLSGCSDLDDIEGFP------PNLKELYLVSTAL 1220

Query: 628  KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
            KE+P   +L   LE+LN   C +L+ +PS+   L    T   S CF L
Sbjct: 1221 KELP---QLPQSLEVLNAHGCVSLLSIPSNFERLPRYYT--FSNCFAL 1263



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 95/165 (57%), Gaps = 10/165 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M++  EK++ L+   S+ VR+IGICG+ G GKTTIA+ +Y  +  +FE S  + +++   
Sbjct: 271 MEAHMEKMKELLGLDSNKVRLIGICGLPGSGKTTIAKRLYQQLLPQFELSTIIIDIKGCY 330

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDG----IDMLGSRLQRKKVLLVIDDVVDVKQL 116
            +       R+L  Q   L+   + + F G    ++     L+ KKV+LV+DDV  + QL
Sbjct: 331 PRTCYNEDDRKLQLQSHLLS-QLLNHKFTGEILQLEAAHEMLKDKKVVLVLDDVDSIGQL 389

Query: 117 QSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYK-----PHGL 156
            +LA    WFG GSRIIIT++D+ LL+  G+  +Y      P+GL
Sbjct: 390 DALANEARWFGPGSRIIITTQDQRLLEEQGIQYIYNVDFPPPNGL 434



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 57/269 (21%)

Query: 544  EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            + L  LH E   ++ LP   +    LV LNL   + L+ L     +L+ L+ +KL    +
Sbjct: 987  DELRLLHWENYPLQSLPQDFDPCH-LVELNLSYSQ-LQKLWAGTKSLEMLKVVKLCHSQQ 1044

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
            L    +I+++                          +EL++L  C+ L R P++   L+ 
Sbjct: 1045 LTAIDDILKAQN------------------------IELIDLQGCRKLQRFPATG-QLQH 1079

Query: 664  LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPS 723
            L+ +NLSGC ++++ PE    I   EEL + GT +         +PI            S
Sbjct: 1080 LRVVNLSGCREIKSFPEVSPNI---EELHLQGTGIRE-------LPI------------S 1117

Query: 724  LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIEL 783
            +  L    KLN    NL+     S + N  + ++      S   L TS  +L KL+ + +
Sbjct: 1118 IVSLFEQAKLNRELFNLLPEF--SGVSNAWNNEQ----STSLAKLVTSTQNLGKLVCLNM 1171

Query: 784  EDCKRLQSLPQLP--PNIRQVRVNGCASL 810
            +DC  L+ LP +    +++ + ++GC+ L
Sbjct: 1172 KDCVHLRKLPYMVDFESLKVLNLSGCSDL 1200


>gi|297794741|ref|XP_002865255.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311090|gb|EFH41514.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1260

 Score =  347 bits (889), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 255/710 (35%), Positives = 390/710 (54%), Gaps = 67/710 (9%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
           +R +GI GM G+GKTT+A+ V+D +S  F+AS F+++  +   + GL  L  + L +   
Sbjct: 170 IRCVGIWGMPGIGKTTLAKAVFDQMSSAFDASCFIEDYDKAFHEKGLYCLLEEQLFKENP 229

Query: 79  LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
             D +I      +  L  RL  K+VL+V+DDV +    +S     +W G GS IIITSRD
Sbjct: 230 GNDATIMK----LSSLRDRLNSKRVLVVLDDVRNALVAESFLEGFDWLGPGSLIIITSRD 285

Query: 139 EHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALE 198
           + + +  G++++Y+  GLN  EALQLF + A    Q L E   LS +++ YA G PLA+ 
Sbjct: 286 KQVFRLCGINQIYEVQGLNEKEALQLFLLCASMGEQNLHE---LSMKVVNYANGNPLAIS 342

Query: 199 VLGSFLSGRS-VDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGND 257
           V G  L G+  + E  +   +L+  PP +I D  + S+D L + EK IFLDIACFF+G +
Sbjct: 343 VYGRELKGKKKLSEMETAFLKLKRRPPFKIFDAFKSSYDSLCDNEKNIFLDIACFFQGEN 402

Query: 258 RDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKR 317
            +YV   LEGCGF P + I VL+EKCL+T+  N +W+H+L Q++G++I+  ++  ++ +R
Sbjct: 403 VNYVIQLLEGCGFFPHVEIDVLVEKCLVTISENRVWLHNLTQDVGREIINGETV-QIERR 461

Query: 318 SRLWK-----------EEEVC----HVLTESTGTELVEGIVLDNYHHENEVYLCASAKAF 362
            RLW+           E + C         + G++ +EG+ LD  +   +V       AF
Sbjct: 462 RRLWEPWSIKYLLEYNEHKACGEPKTTFKRTQGSDEIEGMFLDTSNLRFDV----QPSAF 517

Query: 363 SKMTNLRLLKI-CN-------LQLPNG-LEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
             M NL+LLKI C+       +  P G L  L N LRLL W  YPL+ LP +      +E
Sbjct: 518 KNMLNLKLLKIYCSNPEVHPVINFPKGSLHSLPNELRLLHWENYPLQSLPQSFDPWHLVE 577

Query: 414 IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
           I M YS++ +LW G K+L+ L+ + L HS++L+ + D   A NLE + L+GCTRL    P
Sbjct: 578 INMPYSQLQKLWGGTKNLEMLRTIRLCHSQHLVDIDDLFKAQNLEVIDLQGCTRLQNF-P 636

Query: 474 SLLLHNKLIILNMKDC---TSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGD 530
           +     +L ++N+  C    S++ +P  I    L+   + + P        +ST+  +  
Sbjct: 637 AAGQLLRLRVVNLSGCIEIKSVLEMPPNIETLHLQGTGILAFP--------VSTVKPNR- 687

Query: 531 LKFREFPEIVEHMEHLSE-LHLE-GTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS 588
              RE    +  +  LSE L LE  T++     S + L  L+ L LK+C  L+ LP  ++
Sbjct: 688 ---RELVNFLTEIPGLSEALKLERLTSLLESSSSCQDLGKLICLELKDCSCLQSLP-NMA 743

Query: 589 NLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDC 648
           NL  L  L LSGCS+L       R +K   +L+L GT+IKEVP   +L   LELLN    
Sbjct: 744 NLDLLNLLDLSGCSRLNSIQGFPRFLK---KLYLGGTAIKEVP---QLPQSLELLNARG- 796

Query: 649 KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
            + +R   ++  L+ LK L+LSGC +LE +    G   +L+EL  +GT +
Sbjct: 797 -SCLRSLPNMANLEFLKVLDLSGCSELETIQ---GFPRNLKELYFAGTTL 842



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 215  TLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVI 274
            +L+ +E+     + ++L++S+D LQE++K +FL I+  F   D D V   + G       
Sbjct: 1040 SLDPVEVSGYEAVKEVLRVSYDDLQEMDKVLFLYISSLFNDEDVDLVAPLIAGIDLDVSS 1099

Query: 275  GIRVLIEKCLITVHNN-TLWMHDLLQELGQQIVQRQS 310
            G++VL +  LI++ +N  + MH L++++G++I+  QS
Sbjct: 1100 GLKVLADVSLISISSNGEIVMHCLVRQMGKEILHEQS 1136



 Score = 40.0 bits (92), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 98/247 (39%), Gaps = 60/247 (24%)

Query: 549 LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
           LH E   ++ LP S +    LV +N+   + L+ L     NL+ LR+++L     L    
Sbjct: 556 LHWENYPLQSLPQSFDPWH-LVEINMPYSQ-LQKLWGGTKNLEMLRTIRLCHSQHLV--- 610

Query: 609 EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
                  D+ +LF                  LE+++L  C  L   P++   L+ L+ +N
Sbjct: 611 -------DIDDLFK--------------AQNLEVIDLQGCTRLQNFPAAGQLLR-LRVVN 648

Query: 669 LSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLC 728
           LSGC ++++V E    IE+L        A P ST       +   R+ +   L  + GL 
Sbjct: 649 LSGCIEIKSVLEMPPNIETLHLQGTGILAFPVST-------VKPNRRELVNFLTEIPGLS 701

Query: 729 SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKR 788
              KL      L   +   D+G                          KL+ +EL+DC  
Sbjct: 702 EALKLERLTSLLESSSSCQDLG--------------------------KLICLELKDCSC 735

Query: 789 LQSLPQL 795
           LQSLP +
Sbjct: 736 LQSLPNM 742


>gi|295083321|gb|ADF78114.1| rj2 protein [Glycine max]
          Length = 1052

 Score =  347 bits (889), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 264/705 (37%), Positives = 389/705 (55%), Gaps = 52/705 (7%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR  ++  L+D  S D V MIGI G+GG+GK+T+A  VY+LI+  F+ S FL ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  LL ++L   + ++ +V  G  ++  RLQRKKVLL++DDV   +QLQ++
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G   WFG GSR+IIT+RD+ LL +HGV   Y+   LN + ALQL   K+FKT +     
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            ++   ++ YA GLPLALEV+GS L G+S++EW+S +++ +  P  +IL+IL++SFD L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNN------TL 292
           E +K +FLDIAC F   D   V + L    G      I VL+EK LI    +       +
Sbjct: 432 EEQKNVFLDIACCFNRYDLTKVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPRV 491

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD-NYHHEN 351
            MHDL++++G++IV+++SP+E  KRSRLW  E++ HVL ++ GT  +E I LD     + 
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKE 551

Query: 352 EVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           E+ +  + KAF KM NL+ L I N +   G +YL N LR+L W  YP   LPS+    K 
Sbjct: 552 EIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPNNLRVLEWWRYPSHCLPSDFHPKKL 611

Query: 412 IEIYMCYSRIGE-----LWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
               + +S I       LWK   +   L+++     E L ++PD +G PNLE+   E C 
Sbjct: 612 AICKLPFSCISSFELDGLWKMFVN---LRILNFDRCEGLTQIPDVSGLPNLEEFSFECCF 668

Query: 467 RLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLD 526
            L  +H S+   +KL ILN   C  L + P  I + SLEKLNL           C S   
Sbjct: 669 NLITVHNSIGFLDKLKILNAFRCKRLRSFP-PIKLTSLEKLNLSF---------CYS--- 715

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVT 586
                    FP+I+  ME++ +L L  ++I  LP S + L+GL  L L       I  V 
Sbjct: 716 ------LESFPKILGKMENIRQLCLSESSITELPFSFQNLAGLRGLELLFLSPHTIFKVP 769

Query: 587 VS-----NLKCLRSLKLSGCSKLK------KFPEIVRSMKDLSELFLDGTSIKEVPSSIE 635
            S      L  +R+L L G   LK      K   IV SM ++  L +   ++ +   SI+
Sbjct: 770 SSIVLMPELTVIRALGLKGWQWLKQEEGEEKTGSIVSSMVEM--LTVSSCNLCDEFFSID 827

Query: 636 L--LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
                 ++ L LS+  N   LP  I   + L+ L++ GC  L  +
Sbjct: 828 FTWFAHMKELCLSE-NNFTILPECIKECQFLRKLDVCGCKHLREI 871



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 174/444 (39%), Gaps = 124/444 (27%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNL 651
            LR L    C  L + P+ V  + +L E   +   ++  V +SI  L KL++LN   CK L
Sbjct: 636  LRILNFDRCEGLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRL 694

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV------------- 698
               P   I L SL+ LNLS C+ LE+ P+ LG++E++ +L +S +++             
Sbjct: 695  RSFPP--IKLTSLEKLNLSFCYSLESFPKILGKMENIRQLCLSESSITELPFSFQNLAGL 752

Query: 699  ---------PHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRK----------------- 732
                     PH T +     I LM +   ++   L G   L++                 
Sbjct: 753  RGLELLFLSPH-TIFKVPSSIVLMPELTVIRALGLKGWQWLKQEEGEEKTGSIVSSMVEM 811

Query: 733  LNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSL 792
            L ++ CNL +     D      +KEL LS+N+F  LP  I     L  +++  CK L+ +
Sbjct: 812  LTVSSCNLCDEFFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRKLDVCGCKHLREI 871

Query: 793  PQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEA 852
              +PPN++      C                               KSL  S +R++L  
Sbjct: 872  RGIPPNLKHFFAINC-------------------------------KSLTSSSIRKFLNQ 900

Query: 853  VSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS- 911
              +   +    +PG  IPEWF  Q+ G SI+       + + K     +C +   +++  
Sbjct: 901  ELHEAGNTVFCLPGKRIPEWFDQQSRGPSIS------FWFRNKFPDMVLCLIVAPIRSQF 954

Query: 912  -------RGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLS----RQTC 960
                    GN C         +C+               Q G  H +L  L     R + 
Sbjct: 955  FRPEVFINGNEC------SPYSCYF--------------QKGMHHAYLCDLREIEFRNSP 994

Query: 961  YDIRLPLESNLEPFES--NHVNVS 982
            Y++         PFE+  NHVNV+
Sbjct: 995  YEV---------PFENGWNHVNVT 1009


>gi|295083311|gb|ADF78109.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  347 bits (889), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 260/700 (37%), Positives = 384/700 (54%), Gaps = 42/700 (6%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR  ++  L+D  S D V MIGI G+GG+GK+T+A  VY+LI+  F+ S FL ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  LL ++L   + ++ +V  G  ++  RLQRKKVLL++DDV   +QLQ++
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G   WFG GSR+IIT+RD+ LL +HGV   Y+   LN + ALQL   K+FKT +     
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            ++   ++ YA GLPLALEV+GS L G+S++EW+S +++ +  P  +IL+IL++SFD L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNN------TL 292
           E +K +FLDIAC F   D   V + L    G      I VL+EK LI    +       +
Sbjct: 432 EEQKNVFLDIACCFNRYDLTEVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPIV 491

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD-NYHHEN 351
            MHDL++++G++IV+++SP+E  KRSRLW  E++ HVL ++ GT  +E I LD     + 
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKE 551

Query: 352 EVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           E+ +  + KAF KM NL+ L I N +   G +YL N LR+L W  YP   LPS+    K 
Sbjct: 552 EIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPNNLRVLEWWRYPSHCLPSDFHPKKL 611

Query: 412 IEIYMCYSRIG--ELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLY 469
               + +S I   EL    K    L+++     E L ++PD +G PNLE+   E C  L 
Sbjct: 612 AICKLPFSCISSFELDGVWKMFVNLRILNFDRCEGLTQIPDVSGLPNLEEFSFECCFNLI 671

Query: 470 EIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG 529
            +H S+   +KL ILN   C  L + P  I + SLEKLN          L C  +L+   
Sbjct: 672 TVHNSIGFLDKLKILNAFRCKRLRSFP-PIKLTSLEKLN----------LSCCYSLE--- 717

Query: 530 DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS- 588
                 FP+I+  ME++ +L L  ++I  LP S + L+GL  L L       I  V  S 
Sbjct: 718 -----SFPKILGKMENIRQLWLSESSITELPFSFQNLAGLRGLELLFLSPHTIFKVPSSI 772

Query: 589 ----NLKCLRSLKLSGCSKLK------KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLT 638
                L  +R+L L G   LK      K   IV S  ++  + +   S +          
Sbjct: 773 VLMPELTVIRALGLKGWQWLKQEEGEEKTGSIVSSKVEMLTVAICNLSDEFFSIDFTWFA 832

Query: 639 KLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
            ++ L LS+  N   LP  I   + L+ L++  C  L  +
Sbjct: 833 HMKELCLSE-NNFTILPECIKECQFLRKLDVCDCKHLREI 871



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 110/444 (24%), Positives = 173/444 (38%), Gaps = 124/444 (27%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNL 651
            LR L    C  L + P+ V  + +L E   +   ++  V +SI  L KL++LN   CK L
Sbjct: 636  LRILNFDRCEGLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRL 694

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV------------- 698
               P   I L SL+ LNLS C+ LE+ P+ LG++E++ +L +S +++             
Sbjct: 695  RSFPP--IKLTSLEKLNLSCCYSLESFPKILGKMENIRQLWLSESSITELPFSFQNLAGL 752

Query: 699  ---------PHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRK----------------- 732
                     PH T +     I LM +   ++   L G   L++                 
Sbjct: 753  RGLELLFLSPH-TIFKVPSSIVLMPELTVIRALGLKGWQWLKQEEGEEKTGSIVSSKVEM 811

Query: 733  LNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSL 792
            L +  CNL +     D      +KEL LS+N+F  LP  I     L  +++ DCK L+ +
Sbjct: 812  LTVAICNLSDEFFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRKLDVCDCKHLREI 871

Query: 793  PQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEA 852
              +PPN++      C                               KSL  S +R++L  
Sbjct: 872  RGIPPNLKHFFAINC-------------------------------KSLTSSSIRKFLNQ 900

Query: 853  VSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS- 911
              +   +    +PG  IPEWF  Q+ G SI+       + + K     +C +   +++  
Sbjct: 901  ELHEAGNTVFCLPGKRIPEWFDQQSRGPSIS------FWFRNKFPDMVLCLIVAPIRSQF 954

Query: 912  -------RGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLS----RQTC 960
                    GN C                 Y   F     Q G  H +L  L     R + 
Sbjct: 955  FRPEVFINGNEC---------------SPYSCCF-----QKGMHHAYLCDLREIKFRNSP 994

Query: 961  YDIRLPLESNLEPFES--NHVNVS 982
            Y++         PFE+  NHVNV+
Sbjct: 995  YEV---------PFENGWNHVNVT 1009


>gi|297807803|ref|XP_002871785.1| hypothetical protein ARALYDRAFT_909793 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317622|gb|EFH48044.1| hypothetical protein ARALYDRAFT_909793 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1074

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 241/700 (34%), Positives = 378/700 (54%), Gaps = 53/700 (7%)

Query: 3   SRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK 62
           +R  ++  L+   S DVR +G+ GM G+GKTT+A+ V+D +S++++AS F++N  E    
Sbjct: 151 TRLMEIENLLCEQSWDVRRLGLWGMPGIGKTTLAKAVFDHMSNDYDASCFIENFDEQLRM 210

Query: 63  GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGN 122
            G   L  + + ++L+       +    + +L  +L   ++++V+DDV +    +S  G 
Sbjct: 211 VGPYRLLEEKIGRILEEKFGISSSYITRLSLLRDKLCDTRIVVVLDDVRNPLAAESFLGR 270

Query: 123 REWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQL 182
            +WFG GS IIITSR + +     + ++Y+ HGLN  EAL+LF+  AF+   P Q   +L
Sbjct: 271 LDWFGPGSLIIITSRYKQVFALCQISQIYEVHGLNKHEALKLFSQNAFEKDVPEQNDKEL 330

Query: 183 SARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELE 242
           S ++I YA G PLAL + G  L G+   E  +   RL+  PP +I D L+  +  L + E
Sbjct: 331 SMKVIDYANGNPLALCIYGRELKGKK-SEMEAAFLRLQQCPPKKIQDRLKSVYSALSDNE 389

Query: 243 KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELG 302
              FL+IACFFKG + DY+   L+ CG+ P +GI VL+EKCL+T+  NTL M+D++Q++ 
Sbjct: 390 TYTFLNIACFFKGENVDYMVQLLKWCGYFPRVGIDVLVEKCLVTISENTLQMYDMIQDMI 449

Query: 303 QQIVQRQSPEELGKRSRLWKEEEVCHVLTES---------------TGTELVEGIVLDNY 347
           + I+  +   ++ + + LW    + ++L +                   E +EGI LD  
Sbjct: 450 RDIITGEKI-QMERCTTLWHTSHIRYLLEDDELKADGDPKEIPKCLMVAEDIEGICLDT- 507

Query: 348 HHENEVYLCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPL 399
              + +    +  AF KM +LR LKI N        L  PNGL YL   LRLL W  YP 
Sbjct: 508 ---SNLIFDVNPDAFKKMVSLRFLKIYNSYSENVPGLNFPNGLNYLPRELRLLHWEKYPF 564

Query: 400 KFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEK 459
           + LP    + + +E+ M YS + +LW+  K+L+ LK + L HS  L++      A N+E 
Sbjct: 565 ESLPQGFDLQELVELNMPYSELKKLWETNKNLEMLKRIKLCHSRQLVKFS--IHAQNIEL 622

Query: 460 LILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGL 519
           + L+GCTRL     +  L + L +LN+  C+++   PG  L  ++E+L L+   T+I  +
Sbjct: 623 INLQGCTRLENFSGTTKLQH-LRVLNLSGCSNITIFPG--LPPNIEELYLQG--TSIEEI 677

Query: 520 KCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTA--IRGLPLSIELLSGLVLLNLKNC 577
             +S L  S      E    ++H   L  + LE     I+G   S + +  LVLLN+K+C
Sbjct: 678 P-ISILARSSQPNCEELMNHMKHFPGLEHIDLESVTNLIKGSSYS-QGVCKLVLLNMKDC 735

Query: 578 RSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELL 637
             L  LP  +S+L+ L+ L LSGCS+L++     R+ K   EL+L GTSI+E+P   E  
Sbjct: 736 LQLRSLP-DMSDLESLQVLDLSGCSRLEEIKCFPRNTK---ELYLAGTSIRELP---EFP 788

Query: 638 TKLELLNLSDCKNL--VRLPSSIIALKSLKTLNLSGCFKL 675
             LE+LN  DC  L  VRL    +     +    S CF+L
Sbjct: 789 ESLEVLNAHDCGLLKSVRLDFEQLP----RHYTFSNCFRL 824


>gi|308171398|gb|ADO15993.1| Rj2/Rfg1 protein [Glycine max]
 gi|308171402|gb|ADO15995.1| Rj2/Rfg1 protein [Glycine max]
 gi|308171404|gb|ADO15996.1| Rj2/Rfg1 protein [Glycine max]
 gi|308171406|gb|ADO15997.1| Rj2/Rfg1 protein [Glycine max]
          Length = 1052

 Score =  346 bits (888), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 264/705 (37%), Positives = 388/705 (55%), Gaps = 52/705 (7%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR  ++  L+D  S D V MIGI G+GG+GK+T+A  VY+LI+  F+ S FL ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  LL ++L   + ++ +V  G  ++  RLQRKKVLL++DDV   +QLQ++
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G   WFG GSR+IIT+RD+ LL +HGV   Y+   LN + ALQL   K+FKT +     
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            ++   ++ YA GLPLALEV+GS L G+S++EW+S +++ +  P  +IL+IL++SFD L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNN------TL 292
           E +K +FLDIAC F   D   V + L    G      I VL+EK LI    +       +
Sbjct: 432 EEQKNVFLDIACCFNRYDLTKVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPRV 491

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD-NYHHEN 351
            MHDL++++G++IV+++SP+E  KRSRLW  E++ HVL ++ GT  +E I LD     + 
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKE 551

Query: 352 EVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           E+ +  + KAF KM NL+ L I N +   G +YL N LR+L W  YP   LPS+    K 
Sbjct: 552 EIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPNNLRVLEWWRYPSHCLPSDFHPKKL 611

Query: 412 IEIYMCYSRIGE-----LWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
               + +S I       LWK   +   L+++     E L ++PD +G PNLE+   E C 
Sbjct: 612 AICKLPFSCISSFELDGLWKMFVN---LRILNFDRCEGLTQIPDVSGLPNLEEFSFECCF 668

Query: 467 RLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLD 526
            L  +H S+   +KL ILN   C  L + P  I + SLEKLNL           C S   
Sbjct: 669 NLITVHNSIGFLDKLKILNAFRCKRLRSFP-PIKLTSLEKLNLSF---------CYS--- 715

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVT 586
                    FP+I+  ME++ +L L  ++I  LP S + L+GL  L L       I  V 
Sbjct: 716 ------LESFPKILGKMENIRQLCLSESSITELPFSFQNLAGLRGLELLFLSPHTIFKVP 769

Query: 587 VS-----NLKCLRSLKLSGCSKLK------KFPEIVRSMKDLSELFLDGTSIKEVPSSIE 635
            S      L  +R+L L G   LK      K   IV SM ++  L +   ++ +   SI+
Sbjct: 770 SSIVLMPELTVIRALGLKGWQWLKQEEGEEKTGSIVSSMVEM--LTVSSCNLCDEFFSID 827

Query: 636 L--LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
                 ++ L LS   N   LP  I   + L+ L++ GC  L  +
Sbjct: 828 FTWFAHMKELCLSK-NNFTILPECIKECQFLRKLDVCGCKHLREI 871



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 109/444 (24%), Positives = 174/444 (39%), Gaps = 124/444 (27%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNL 651
            LR L    C  L + P+ V  + +L E   +   ++  V +SI  L KL++LN   CK L
Sbjct: 636  LRILNFDRCEGLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRL 694

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV------------- 698
               P   I L SL+ LNLS C+ LE+ P+ LG++E++ +L +S +++             
Sbjct: 695  RSFPP--IKLTSLEKLNLSFCYSLESFPKILGKMENIRQLCLSESSITELPFSFQNLAGL 752

Query: 699  ---------PHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRK----------------- 732
                     PH T +     I LM +   ++   L G   L++                 
Sbjct: 753  RGLELLFLSPH-TIFKVPSSIVLMPELTVIRALGLKGWQWLKQEEGEEKTGSIVSSMVEM 811

Query: 733  LNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSL 792
            L ++ CNL +     D      +KEL LSKN+F  LP  I     L  +++  CK L+ +
Sbjct: 812  LTVSSCNLCDEFFSIDFTWFAHMKELCLSKNNFTILPECIKECQFLRKLDVCGCKHLREI 871

Query: 793  PQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEA 852
              +PPN++      C                               KSL  S +R++L  
Sbjct: 872  RGIPPNLKHFFAINC-------------------------------KSLTSSSIRKFLNQ 900

Query: 853  VSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS- 911
              +   +    +PG  IPEWF  Q+ G SI+       + + K     +C +   +++  
Sbjct: 901  ELHEAGNTVFCLPGKRIPEWFDQQSRGPSIS------FWFRNKFPDMVLCLIVAPIRSQF 954

Query: 912  -------RGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLS----RQTC 960
                    GN C         +C+               Q G  H +L  L     R + 
Sbjct: 955  FRPEVFINGNEC------SPYSCYF--------------QKGMHHAYLCDLREIEFRNSP 994

Query: 961  YDIRLPLESNLEPFES--NHVNVS 982
            Y++         PFE+  NHVNV+
Sbjct: 995  YEV---------PFENGWNHVNVT 1009


>gi|357468503|ref|XP_003604536.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505591|gb|AES86733.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1088

 Score =  346 bits (887), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 228/623 (36%), Positives = 353/623 (56%), Gaps = 42/623 (6%)

Query: 8   LRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVS 67
           L+ L+   S DVR++GI GMGG+GKTT+A  V+  +  E+E   FL+N+RE S+K G+V 
Sbjct: 255 LKSLLSQESEDVRVVGIWGMGGIGKTTLAEEVFHQLQSEYEGCCFLENIREESAKHGMVF 314

Query: 68  LQRQLLSQLL-KLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWF 126
           L+ +L+S LL ++    I N       + +R++R KVL+V+DDV D  QL+ L G+ + F
Sbjct: 315 LKEKLISALLDEVVKVDIANRLPH--YVKTRIRRMKVLIVLDDVNDFDQLEILFGDHDLF 372

Query: 127 GSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARI 186
           G GSRIIIT+RD+ +L +  VD++ +   L+YD++L+LFN+ AFK  +   E  +LS R+
Sbjct: 373 GFGSRIIITTRDKQML-SKDVDDILEVGALDYDKSLELFNLNAFKGKELEIEYNELSKRV 431

Query: 187 IRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIF 246
           + YA G+PL L+VL   + G+    W S L++L   P  ++ D++++S+D L   E+KIF
Sbjct: 432 VNYAKGIPLVLKVLAHLVRGKDKLVWESQLDKLRKMPSKKVQDVMRLSYDDLDREEQKIF 491

Query: 247 LDIACFFKGND--RDYVTNFLEGCGFHPVI--GIRVLIEKCLITV-HNNTLWMHDLLQEL 301
           LDIACFF G++   DY+    +       +  G+  L +K L++V  +N + MH ++Q++
Sbjct: 492 LDIACFFNGSNLKVDYLKLLWKDSESDNSVASGLERLKDKDLVSVSKHNVISMHGIIQDM 551

Query: 302 GQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKA 361
           G++IV+++S  + G RSRLW ++++  VL    GTE +  I +      N   L  S   
Sbjct: 552 GREIVRQESSGDPGSRSRLW-DDDIYEVLKNDKGTEEIRSIWMPLPTLRN---LKLSPST 607

Query: 362 FSKMTNLRLLKICNLQ-------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
           FSKM NL+ L + N+        LP+GL  +   LR L W  YPLK LP     +K + +
Sbjct: 608 FSKMRNLQFLYVPNVYDQDGFDLLPHGLHSMPPELRYLCWMHYPLKSLPDEFSAEKLVIL 667

Query: 415 YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
            + YSR+ +LW G+++L  LK + L +S  L ++PDF+ A NLE L +  C +L  +HPS
Sbjct: 668 DLSYSRVEKLWHGVQNLLNLKEVKLFYSRFLKQLPDFSKALNLEVLDIHFCGQLTSVHPS 727

Query: 475 LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFR 534
           +     L  L++  CT+L  L       SL  L+LK                       R
Sbjct: 728 IFSLENLEKLDLSHCTALTELTSDTHSSSLRYLSLKFCKN------------------IR 769

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
           +F    E+M    EL L+ T I  LP S    + L +L+L NC S+E  P    NL  L+
Sbjct: 770 KFSVTSENM---IELDLQYTQINALPASFGRQTKLEILHLGNC-SIERFPSCFKNLIRLQ 825

Query: 595 SLKLSGCSKLKKFPEIVRSMKDL 617
            L +  C KL+  PE+ +S++ L
Sbjct: 826 YLDIRYCLKLQTLPELPQSLEVL 848



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 149/338 (44%), Gaps = 53/338 (15%)

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
           LK  P+   + K L  L L  + ++++   ++ L  L+ + L   + L +LP    AL +
Sbjct: 652 LKSLPDEFSAEK-LVILDLSYSRVEKLWHGVQNLLNLKEVKLFYSRFLKQLPDFSKAL-N 709

Query: 664 LKTLNLSGCFKLENVPETLGQIESLEELDISG-TAVPHSTSWYSYIPINLMRKSVALKLP 722
           L+ L++  C +L +V  ++  +E+LE+LD+S  TA+   TS            S +L+  
Sbjct: 710 LEVLDIHFCGQLTSVHPSIFSLENLEKLDLSHCTALTELTS---------DTHSSSLRYL 760

Query: 723 SLSGLCSLRKLNLTDCNLME--------GALPSDIGNLCSLKELYLSKNSFVSLPTSITH 774
           SL    ++RK ++T  N++E         ALP+  G    L+ L+L   S    P+   +
Sbjct: 761 SLKFCKNIRKFSVTSENMIELDLQYTQINALPASFGRQTKLEILHLGNCSIERFPSCFKN 820

Query: 775 LSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLL-----DALKLCKSDSTMIAC 829
           L +L  +++  C +LQ+LP+LP ++  +   GC SL ++L     +  K  +       C
Sbjct: 821 LIRLQYLDIRYCLKLQTLPELPQSLEVLHARGCTSLESVLFPSIPEQFKENRYRVVFANC 880

Query: 830 LDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSV-----------------------VVPG 866
           L     L   SLA       +  +    QH+S                        V PG
Sbjct: 881 LK----LDEHSLANIAFNAQINNMKFACQHVSALEHDFHNKFNDYKDHNDSYQAIYVYPG 936

Query: 867 SEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCV 904
           + +PEWF Y      + +   S+  +   L+G+  C V
Sbjct: 937 NSVPEWFEYMTTTDYVVIDLSSST-SSSPLLGFIFCFV 973



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 6/141 (4%)

Query: 548 ELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKF 607
           ++H  G      P SI  L  L  L+L +C +L  L  + ++   LR L L  C  ++KF
Sbjct: 714 DIHFCGQLTSVHP-SIFSLENLEKLDLSHCTALTEL-TSDTHSSSLRYLSLKFCKNIRKF 771

Query: 608 PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL 667
                +M    EL L  T I  +P+S    TKLE+L+L +C ++ R PS    L  L+ L
Sbjct: 772 SVTSENM---IELDLQYTQINALPASFGRQTKLEILHLGNC-SIERFPSCFKNLIRLQYL 827

Query: 668 NLSGCFKLENVPETLGQIESL 688
           ++  C KL+ +PE    +E L
Sbjct: 828 DIRYCLKLQTLPELPQSLEVL 848


>gi|357468519|ref|XP_003604544.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505599|gb|AES86741.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1087

 Score =  346 bits (887), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 242/706 (34%), Positives = 373/706 (52%), Gaps = 67/706 (9%)

Query: 11  LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQR 70
           L+   S DVR++GI GMGG+GKTT+A  V+  +  E+E   FL+N+RE S+K G++ L+ 
Sbjct: 248 LLSLDSQDVRIVGIWGMGGIGKTTLAEEVFHQLQTEYEGCCFLENIREESAKHGMLFLKE 307

Query: 71  QLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGS 130
           +L S LL   D  +         + +R+ R K L+V+DDV D  Q++ LAG+ + FG GS
Sbjct: 308 KLFSALLD-EDVKVDTANRLPHYVKTRISRMKALIVLDDVNDFDQMEILAGDHDLFGFGS 366

Query: 131 RIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYA 190
           R+IIT+RD+ +L +  VD++Y+   L++D++L+LFN+ AFK  +   E  +L+ R++ YA
Sbjct: 367 RVIITTRDKQML-SQDVDDIYEVGALDFDKSLELFNLNAFKVKELEIEYYELTKRVVNYA 425

Query: 191 GGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIA 250
            G+PL L+VL   L G+    W S L++L+  P  ++ D+ ++S+D L   EKKIF D+A
Sbjct: 426 KGIPLVLKVLAHLLRGKDKLVWESQLDKLKKMPSKKVQDVTRLSYDDLDRKEKKIFSDLA 485

Query: 251 CFFKGND--RDYVTNFLEGCGFHPVI--GIRVLIEKCLITV-HNNTLWMHDLLQELGQQI 305
           CFF G++   DY+   L+       +  G+  L +K LI+   +N + MHD++QE+G++I
Sbjct: 486 CFFNGSNLKVDYIKFLLKDSESDNSVASGLERLKDKGLISFSKDNVISMHDIIQEMGREI 545

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKM 365
           V+++S  + G  SRLW +++V  VL   TGTE +  I +          L  S   F+ M
Sbjct: 546 VRQESNGDPGSCSRLW-DDDVYEVLKNDTGTEAIRSIWM---QLPTLRKLKLSPSTFANM 601

Query: 366 TNLRLLKI---CNLQ----LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
            NL+ L +   C+      LP GL  L   LR L W  YPLK LP     +K + + + Y
Sbjct: 602 RNLQFLYVPSTCDQDGFDLLPQGLHSLPPELRYLSWMHYPLKSLPDEFSAEKLVILDLSY 661

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           SR+ +LW G+++L  LK + L  S  L  +PDF+ A NLE L +  C++L  +HPS+L  
Sbjct: 662 SRVEKLWHGVQNLLNLKEVKLFFSRYLKELPDFSKALNLEVLDIHFCSQLTSVHPSILSL 721

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
            KL  L++  CTSL  L       SL  LNLK        ++  S   V           
Sbjct: 722 EKLEKLDLSHCTSLTELTSDTHTSSLRYLNLK----FCKNIRKFSVTSV----------- 766

Query: 539 IVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKL 598
                 +++EL L  T +  LP S    S L +L+L NC S+E  P    NL  L+ L++
Sbjct: 767 ------NMTELDLRYTQVNTLPASFGCQSKLEILHLGNC-SIENFPSCFKNLIKLQYLEV 819

Query: 599 SGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSI 658
             C KL+  P +                    P S+E+L   E   L      V  PS  
Sbjct: 820 RYCQKLQNLPVL--------------------PPSLEILLAQECTAL----KTVLFPSIA 855

Query: 659 IALK-SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTS 703
              K + K +  + C KL+    +L  I    +++I+  A  H ++
Sbjct: 856 EQFKENRKRVVFANCLKLDE--HSLANIVFNAQINITKFAYQHVSA 899



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 121/505 (23%), Positives = 203/505 (40%), Gaps = 115/505 (22%)

Query: 501  MKSLEKLNLKSLPTTISGLKCL------STLDVSG-DLKFREFPEIVEHMEHLSELHLEG 553
            + +L KL L   P+T + ++ L      ST D  G DL  +    +   + +LS +H   
Sbjct: 585  LPTLRKLKLS--PSTFANMRNLQFLYVPSTCDQDGFDLLPQGLHSLPPELRYLSWMHY-- 640

Query: 554  TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRS 613
              ++ LP        LV+L+L   R +E L   V NL  L+ +KL     LK+ P+  ++
Sbjct: 641  -PLKSLPDEFSA-EKLVILDLSYSR-VEKLWHGVQNLLNLKEVKLFFSRYLKELPDFSKA 697

Query: 614  MKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCF 673
            +                         LE+L++  C  L  +  SI++L+ L+ L+LS C 
Sbjct: 698  LN------------------------LEVLDIHFCSQLTSVHPSILSLEKLEKLDLSHC- 732

Query: 674  KLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKL 733
                         SL EL    T+  H++S               L+  +L    ++RK 
Sbjct: 733  ------------TSLTEL----TSDTHTSS---------------LRYLNLKFCKNIRKF 761

Query: 734  NLTDCNLME--------GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELED 785
            ++T  N+ E          LP+  G    L+ L+L   S  + P+   +L KL  +E+  
Sbjct: 762  SVTSVNMTELDLRYTQVNTLPASFGCQSKLEILHLGNCSIENFPSCFKNLIKLQYLEVRY 821

Query: 786  CKRLQSLPQLPPNIRQVRVNGCASLVTLL--DALKLCKSDSTMIACLDSLKLLGNKSLAF 843
            C++LQ+LP LPP++  +    C +L T+L     +  K +   +   + LK L   SLA 
Sbjct: 822  CQKLQNLPVLPPSLEILLAQECTALKTVLFPSIAEQFKENRKRVVFANCLK-LDEHSLAN 880

Query: 844  SMLREYLEAVSNTRQHLSV----------------------VVPGSEIPEWFMYQNEGSS 881
             +    +       QH+S                       V PGS +P+WF Y+     
Sbjct: 881  IVFNAQINITKFAYQHVSASRDEFHNKFNNYNEDDSHQALYVYPGSCVPDWFEYKTTTDY 940

Query: 882  ITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLN-CHIGHGIYGIGFRD 940
            + +  PS+  +  + +GY  C V        GN          +  C  G G     F  
Sbjct: 941  VAIDLPSST-SHSRFLGYIFCFVLG------GNRLIVDMLKFNITLCVEGQGKEEDYFEL 993

Query: 941  KFGQAG----SDHLWLLYLSRQTCY 961
               +      SDH++++Y  + +CY
Sbjct: 994  YISRPSSIIVSDHVFMIYDQQCSCY 1018


>gi|255558308|ref|XP_002520181.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223540673|gb|EEF42236.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score =  345 bits (886), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 235/644 (36%), Positives = 348/644 (54%), Gaps = 85/644 (13%)

Query: 11  LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK-GGLVSLQ 69
           L++  S+ V+++G+ GMGG+GKTT+A+  Y+ + + F    F+ NVREI+ K GGL+SLQ
Sbjct: 3   LLNVRSNRVQVLGLYGMGGIGKTTLAKAFYNKLINHFVLRCFISNVREIADKDGGLISLQ 62

Query: 70  RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG 129
             LL  L   ++  +++V  G   L  +L  K+VL V+DDV DV QL +LAG+R+WFG G
Sbjct: 63  NILLGDLFP-SEQPVYDVDAGSIALKRKLHEKRVLAVLDDVDDVSQLNALAGSRDWFGEG 121

Query: 130 SRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRY 189
           S+IIIT+R++ +L    V+E+Y+   L   EALQLF+  A +  +P  + + LS +I+  
Sbjct: 122 SQIIITTRNKDVLIGQVVNELYEVQELFASEALQLFSYLALRREKPTDDYLNLSKQIVSL 181

Query: 190 AGGLPLALEVLGSF-LSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLD 248
            G LPLALEV GSF L  R+V +    L++L+   P  + D+L+ISFDGL E  K  FLD
Sbjct: 182 TGALPLALEVFGSFLLHKRTVKQREDALKKLQQIRPHNLQDVLRISFDGLDEEVKCAFLD 241

Query: 249 IACFFKGND--RDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWMHDLLQELGQQI 305
           +AC F  ++  ++   + L GCGF     + VL  K LI +  + TLWMHD L+++G+QI
Sbjct: 242 VACLFVNSEIKKEEAIDILMGCGFRAHTVMNVLTAKSLIKIREDCTLWMHDQLRDMGRQI 301

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD---NYHHEN----------- 351
           VQ +   + G+RSRLW   E+       TGT+ V+GI+LD     H E+           
Sbjct: 302 VQLEDLVDPGRRSRLWDHNEIV------TGTKEVQGIILDFRKKRHVEDLSADTILLNNF 355

Query: 352 --------------------EVYLCASAKA------------FSKMTNLRLLKICNLQLP 379
                                ++LC   +A            F  M N+RLL+I   +L 
Sbjct: 356 LTTPNLTSALAYVKEKFKMYLLFLCGLQRAAEVEEPKLGTEVFESMVNMRLLQINYAKLE 415

Query: 380 NGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELW--KGIKHLDKLKVM 437
              +Y    L+ L W+G  LKFLPS+    +     +  S I  LW   G K  + L+V+
Sbjct: 416 GKFKYFPAGLKWLQWKGCALKFLPSDYSPWQLAVPDLSESGIERLWGCTGNKVAESLRVI 475

Query: 438 ILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPG 497
            L     L+  PD +G  +LEKL LE C RL +I  SL         N+++C++++    
Sbjct: 476 NLHGCYILLTTPDLSGYKSLEKLNLEPCIRLTKIDKSL--------GNLRECSNIV---- 523

Query: 498 KILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIR 557
                          P  +SGLK L  L +S   K +E PE + +M  L EL  +GTAI 
Sbjct: 524 -------------EFPRDVSGLKHLQILVLSDCTKLKELPEDIGNMNSLRELLADGTAIP 570

Query: 558 GLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
            LP SI  L+    L+LK+C+S++ LP ++ NL  L+ L L+ C
Sbjct: 571 KLPESIYHLTKPEKLSLKDCQSIKQLPKSIGNLISLKELSLNNC 614



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 111/240 (46%), Gaps = 54/240 (22%)

Query: 532 KFREFPEIVEHMEHLSELHLEGTAIRGLP-------LSIELLSGLVLLNLKNCRSLEILP 584
           KF+ FP        L  L  +G A++ LP       L++  LS   +  L  C   ++  
Sbjct: 417 KFKYFPA------GLKWLQWKGCALKFLPSDYSPWQLAVPDLSESGIERLWGCTGNKVA- 469

Query: 585 VTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLE--L 642
                 + LR + L GC  L   P++    K L +L L+   I+        LTK++  L
Sbjct: 470 ------ESLRVINLHGCYILLTTPDL-SGYKSLEKLNLE-PCIR--------LTKIDKSL 513

Query: 643 LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHST 702
            NL +C N+V  P  +  LK L+ L LS C KL+ +PE +G + SL EL   GTA+P   
Sbjct: 514 GNLRECSNIVEFPRDVSGLKHLQILVLSDCTKLKELPEDIGNMNSLRELLADGTAIP--- 570

Query: 703 SWYSYIPINLMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLS 761
                            KLP S+  L    KL+L DC  ++  LP  IGNL SLKEL L+
Sbjct: 571 -----------------KLPESIYHLTKPEKLSLKDCQSIK-QLPKSIGNLISLKELSLN 612



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 85/159 (53%), Gaps = 17/159 (10%)

Query: 662 KSLKTLNLSGCFKLENVPETLGQIESLEELD----ISGTAVPHSTSWYSYIPINLMRKSV 717
           +SL+ +NL GC+ L   P+  G  +SLE+L+    I  T +  S         NL   S 
Sbjct: 470 ESLRVINLHGCYILLTTPDLSG-YKSLEKLNLEPCIRLTKIDKSLG-------NLRECSN 521

Query: 718 ALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLS 776
            ++ P  +SGL  L+ L L+DC  ++  LP DIGN+ SL+EL     +   LP SI HL+
Sbjct: 522 IVEFPRDVSGLKHLQILVLSDCTKLK-ELPEDIGNMNSLRELLADGTAIPKLPESIYHLT 580

Query: 777 KLLNIELEDCKRLQSLPQLPPN---IRQVRVNGCASLVT 812
           K   + L+DC+ ++ LP+   N   ++++ +N C    T
Sbjct: 581 KPEKLSLKDCQSIKQLPKSIGNLISLKELSLNNCIRRTT 619


>gi|358343944|ref|XP_003636055.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355501990|gb|AES83193.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1250

 Score =  345 bits (886), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 268/803 (33%), Positives = 412/803 (51%), Gaps = 77/803 (9%)

Query: 2   DSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS 61
           D     ++ L+   S++V++IG+ GMGG+GKTT+A  ++  +S +++ S F + V E+S 
Sbjct: 202 DENYRSIQSLIKFDSTEVQIIGVWGMGGIGKTTLATAMFQRVSFKYDGSCFFEKVTEVSK 261

Query: 62  KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAG 121
             G+     +LLS+LLK  D  I        M+  RL+  K  +V+DDV + + LQ+L G
Sbjct: 262 SRGINYTCNKLLSKLLK-EDLDIDTPKLISSMIRRRLKSMKSFIVLDDVHNSELLQNLIG 320

Query: 122 -NREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
               W GSGS +I+T+RD+H+L + G+  +Y+   +N   +L+LF + AF    P    V
Sbjct: 321 VGHGWLGSGSTVIVTTRDKHVLISGGIKTIYEVKKMNSRNSLRLFCLNAFNKVSPKDGYV 380

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS R I YA G PLAL+VLGS LS ++  EW     +L   P +EI  I ++SF+ L +
Sbjct: 381 ELSKRAIDYARGNPLALQVLGSLLSCKNEKEWDCASAKLRKIPNNEIDSIFRLSFNELDK 440

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQ 299
            E+ IFLDIA  FKG +R+ +T  L  CGF   IGI  L++K L+TV + N + MH L+Q
Sbjct: 441 TEQNIFLDIAFVFKGQERNSITKILNECGFFADIGISRLLDKALVTVDSENCIQMHGLIQ 500

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G+QIV+ +S +  G+RSRL   EEV  VL  + G+E VE I LD       +++    
Sbjct: 501 EMGKQIVREESLKNPGQRSRLCDPEEVYDVLKNNRGSEKVEAIYLD---ATESIHVNLRP 557

Query: 360 KAFSKMTNLRLLK------ICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
            AF  M NLRLL       + +++ P+GL  L   LR L W GYPLK +P    ++  +E
Sbjct: 558 DAFENMENLRLLAFQDREGVTSIRFPHGLGLLPKNLRFLRWDGYPLKTVPLTSSLEMLVE 617

Query: 414 IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
           + +  S + +LW G+ +L  L+++ L+ S+ LI  P+ +G+PNL+++IL  C  + E+  
Sbjct: 618 LSLKQSHVEKLWNGVVNLPNLEIIDLNGSKKLIECPNVSGSPNLKEVILRECESMPEVDS 677

Query: 474 SLLLHNKLIILNMKDCTSLITL------PGKILMKSLEKLNLK----------------- 510
           S+    KL  LN+  CTSL +L      P      S+  +NLK                 
Sbjct: 678 SIFHLQKLERLNVCGCTSLKSLSSNTCSPALRHFSSVYCINLKEFSVPLTSVHLHGLYTE 737

Query: 511 ----SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRG-------- 558
                LP++I   + L     S      + PE      +L ++   G A R         
Sbjct: 738 WYGNELPSSILHAQNLKNFGFSISDCLVDLPENFCDSFYLIKILSSGPAFRTVKELIIVE 797

Query: 559 ------LPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVR 612
                 +P SI LLS LV+L L  C +++ LP ++  L  LR + +S C  L+  P + R
Sbjct: 798 IPILYEIPDSISLLSSLVILRLL-CMAIKSLPESLKYLPQLRLVHVSKCKLLQSIPALYR 856

Query: 613 SMKDLSELFLDGTSIKEVPSSI-ELLTKLEL---LNLSDCKNLVRLPSSIIALKSLKTLN 668
            + +LS    D  S++EV SS  EL  K  L   + L +C+NL       +   ++  + 
Sbjct: 857 FIPNLS--VWDCESLEEVLSSTGELYDKPSLYYIVVLINCQNLDTHSYQTVLKDAMVQIE 914

Query: 669 LSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPS-LSGL 727
           L      EN     G  + +        A+P   +W+ Y    +    V L+LPS L G 
Sbjct: 915 LEA---RENSENEYGHKDIIFNF---LPAMPGMENWFHYSSTEV---CVTLELPSNLLGF 965

Query: 728 CSLRKLNLTDCNLMEGALPSDIG 750
                L+       +G + SDIG
Sbjct: 966 AYYLVLS-------QGRIRSDIG 981



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 148/570 (25%), Positives = 241/570 (42%), Gaps = 87/570 (15%)

Query: 499  ILMKSLEKLNLKSLPTT---ISGLKCLSTLDVSGDLKFREFPEIVEHM-EHLSELHLEGT 554
            I + + E +++   P     +  L+ L+  D  G    R FP  +  + ++L  L  +G 
Sbjct: 543  IYLDATESIHVNLRPDAFENMENLRLLAFQDREGVTSIR-FPHGLGLLPKNLRFLRWDGY 601

Query: 555  AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
             ++ +PL+  L   LV L+LK    +E L   V NL  L  + L+G  KL + P +  S 
Sbjct: 602  PLKTVPLTSSL-EMLVELSLKQSH-VEKLWNGVVNLPNLEIIDLNGSKKLIECPNVSGS- 658

Query: 615  KDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCF 673
             +L E+ L +  S+ EV SSI  L KLE LN+  C +L  L S+  +  +L+  +   C 
Sbjct: 659  PNLKEVILRECESMPEVDSSIFHLQKLERLNVCGCTSLKSLSSNTCS-PALRHFSSVYCI 717

Query: 674  KLE--NVPETLGQIESLEELDISGTAVP----HSTSWYSY----------IPINLMRKSV 717
             L+  +VP T   +  L   +  G  +P    H+ +  ++          +P N      
Sbjct: 718  NLKEFSVPLTSVHLHGLY-TEWYGNELPSSILHAQNLKNFGFSISDCLVDLPENFCDSFY 776

Query: 718  ALK-LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLS 776
             +K L S     ++++L + +  ++   +P  I  L SL  L L   +  SLP S+ +L 
Sbjct: 777  LIKILSSGPAFRTVKELIIVEIPILY-EIPDSISLLSSLVILRLLCMAIKSLPESLKYLP 835

Query: 777  KLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTM--IACLDSLK 834
            +L  + +  CK LQS+P L   I  + V  C SL  +L +        ++  I  L + +
Sbjct: 836  QLRLVHVSKCKLLQSIPALYRFIPNLSVWDCESLEEVLSSTGELYDKPSLYYIVVLINCQ 895

Query: 835  LLGNKS----LAFSMLREYLEAVSNTRQ---HLSVV------VPGSEIPEWFMYQNEGSS 881
             L   S    L  +M++  LEA  N+     H  ++      +PG E   WF Y +    
Sbjct: 896  NLDTHSYQTVLKDAMVQIELEARENSENEYGHKDIIFNFLPAMPGME--NWFHYSSTEVC 953

Query: 882  ITVTRPSNLYN-----------KKKLVGYAICCVFHVLKNSRG----NNCFGSYPTHQLN 926
            +T+  PSNL              +  +G+   C    L NS G      CF      Q  
Sbjct: 954  VTLELPSNLLGFAYYLVLSQGRIRSDIGFGYEC---YLDNSSGERIWKKCFKMPDLIQYP 1010

Query: 927  CHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPW 986
               G  ++ I          SDHL L Y   ++C  I   +E      + N  N S++P 
Sbjct: 1011 SWNGTSVHMI----------SDHLVLWY-DPESCKQIMDAVEQIKVITDVN--NTSYDPK 1057

Query: 987  LG----------QGLEVKMCGLHPVYMDEV 1006
            L             +E+K CG H +Y +E 
Sbjct: 1058 LTFTFFINETLYDEVEIKECGFHWIYQEET 1087


>gi|110741935|dbj|BAE98908.1| disease resistance like protein [Arabidopsis thaliana]
          Length = 968

 Score =  345 bits (886), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 252/727 (34%), Positives = 378/727 (51%), Gaps = 80/727 (11%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL---------- 65
           S +VRM+GI G  G+GKTTIAR ++  +S  F  S ++D      S              
Sbjct: 9   SKEVRMVGIWGPSGIGKTTIARALFARLSRHFHCSVYIDRAFVSKSMASYSRANPDDYNM 68

Query: 66  -VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNRE 124
            + LQ   LS +L   +  I    D +  LG RL+ +KVLL IDD+     L +LAG  +
Sbjct: 69  KLHLQETFLSTILGKQNIKI----DHLGALGERLKHQKVLLFIDDLDQQVVLNALAGQIQ 124

Query: 125 WFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSA 184
           WFG GSRII+ + D+HLL +HG++ +Y+    + + AL++    AF+   P     +L+ 
Sbjct: 125 WFGGGSRIIVVTNDKHLLISHGIENIYQVCLPSKELALEMLCRYAFRQNTPPDGFKKLAV 184

Query: 185 RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL-QELEK 243
            ++R+AG LPL L VLGS+L GR+   W   L RL      +I   L++ +DGL  + ++
Sbjct: 185 EVVRHAGILPLGLNVLGSYLRGRNKRYWMDMLPRLRKGLDGKIQKALRVGYDGLDNKKDE 244

Query: 244 KIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQ 303
            IF  IAC F     + +   L     +  IG+  L++K L+ V +N + +H LLQE+G+
Sbjct: 245 AIFRHIACLFNFEKVNDIRLLLADSDLNFNIGLENLVDKSLVNVRSNIVEVHCLLQEMGR 304

Query: 304 QIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFS 363
           +IV+ QS  E G+R  L   E++C VL ++ GT+ + GI LD    ++E  L    KAF 
Sbjct: 305 EIVRAQS-NEAGEREFLMDTEDICDVLDDNIGTKKMLGISLDVDEIDHE--LNVHEKAFQ 361

Query: 364 KMTNLRLLKI----------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
            M NLR L I            L LP   +YL  +L+LL W  YP++ LPS+ + +  ++
Sbjct: 362 GMRNLRFLNIYTKALMSGQKIRLHLPENFDYLPPKLKLLCWDKYPMRCLPSSFRPENLVK 421

Query: 414 IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
           + M  S + +LW+G+  L  LK M L  S+NL  +PD + A NL+ L L+ C+ L +I  
Sbjct: 422 LKMQESELEKLWEGVGSLTCLKDMDLEKSKNLKEIPDLSMATNLKTLNLKYCSSLVKISS 481

Query: 474 SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKS------LPTTISGLKCLSTLDV 527
           S+   NKL  LNM+ CT+L TLP  I +KSL +L+L+        P   + +  L  LD 
Sbjct: 482 SIQNLNKLTKLNMEGCTNLETLPAGINLKSLHRLDLRGCSRLRMFPDISNNISVL-FLDK 540

Query: 528 SGDLKFREFPEIVEHMEHLSELHL---------EGT------------------------ 554
           +      EFP  + H++ L +L +         EG                         
Sbjct: 541 TS---IEEFPSNL-HLKKLFDLSMQQMNSEKLWEGVQPLTCLMKMLSPPLAKNFNTLYLS 596

Query: 555 ---AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIV 611
              ++  LP  I+ L  L+ L+++ C++LE LP T +N K L  L LSGCSKL+ FP+I 
Sbjct: 597 DIPSLVELPCGIQNLKKLMELSIRRCKNLESLP-TGANFKYLDYLDLSGCSKLRSFPDIS 655

Query: 612 RSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSG 671
            +   +S L L+ T I+EVPS IE   +L  L + +C  L  +  +I  LK L   + S 
Sbjct: 656 ST---ISCLCLNRTGIEEVPSWIENFVRLTYLTMLECNKLKYVSLNIFKLKHLDKADFSD 712

Query: 672 CFKLENV 678
           C  L  V
Sbjct: 713 CGTLTEV 719



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 128/544 (23%), Positives = 225/544 (41%), Gaps = 94/544 (17%)

Query: 496 PGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLE-GT 554
           P  ++   +++  L+ L   +  L CL  +D+      +E P++     +L  L+L+  +
Sbjct: 416 PENLVKLKMQESELEKLWEGVGSLTCLKDMDLEKSKNLKEIPDL-SMATNLKTLNLKYCS 474

Query: 555 AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
           ++  +  SI+ L+ L  LN++ C +LE LP  + NLK L  L L GCS+L+ FP+I    
Sbjct: 475 SLVKISSSIQNLNKLTKLNMEGCTNLETLPAGI-NLKSLHRLDLRGCSRLRMFPDIS--- 530

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLEL-------------------------------- 642
            ++S LFLD TSI+E PS++ L    +L                                
Sbjct: 531 NNISVLFLDKTSIEEFPSNLHLKKLFDLSMQQMNSEKLWEGVQPLTCLMKMLSPPLAKNF 590

Query: 643 --LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
             L LSD  +LV LP  I  LK L  L++  C  LE++P T    + L+ LD+SG +   
Sbjct: 591 NTLYLSDIPSLVELPCGIQNLKKLMELSIRRCKNLESLP-TGANFKYLDYLDLSGCSKLR 649

Query: 701 STSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
           S                    P +S   S   LN T        +PS I N   L  L +
Sbjct: 650 S-------------------FPDISSTISCLCLNRTGIE----EVPSWIENFVRLTYLTM 686

Query: 761 ---SKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDAL 817
              +K  +VSL  +I  L  L   +  DC  L  +      I        A+   +   L
Sbjct: 687 LECNKLKYVSL--NIFKLKHLDKADFSDCGTLTEVSWCNKTISV----AAATADNIQPKL 740

Query: 818 KLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQN 877
            + ++ S++      ++ +      F + +E L  +       S+++ G E+P +F ++ 
Sbjct: 741 LVSEASSSLCVQKSVVRFIN----CFKLDQEAL--LQQEPVFKSLILGGEEVPAYFNHRA 794

Query: 878 EGSSITVT-RPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGI 936
            G+S+ +   P+++      +G+  C +  V   S            Q++C      +  
Sbjct: 795 TGNSLVIPLVPTSI--SLDFLGFRACALVDVKAMS-----MPGRVDIQVSCR-----FRG 842

Query: 937 GFRDKFGQAGSDHLWLLY--LSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVK 994
             ++ F  A   H  + +   S    +D R  L ++  P    H++++F        ++ 
Sbjct: 843 SLKNHFDSADHSHSLVAFHKASHLLIFDCRFALNNDSNPLNYAHMDITFHLTTDSVSKIN 902

Query: 995 MCGL 998
            CG+
Sbjct: 903 ACGI 906


>gi|227438257|gb|ACP30618.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1016

 Score =  345 bits (886), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 261/752 (34%), Positives = 405/752 (53%), Gaps = 65/752 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M+++ EK++ L+  GS +VRMIGI G  G+GKTTIAR  ++ +S+ F+ S F+D+++   
Sbjct: 157 MEAQLEKMKPLLCLGSDEVRMIGIWGPPGIGKTTIARFAFNQLSNRFQLSVFMDDLKPNP 216

Query: 61  SK--GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
           ++      SL+ QL  + +    N    V   + +  +RL+ KKVL+V+D V    QL +
Sbjct: 217 TRLCSDDYSLKLQLHQRFMSQITNHKDMVVSHLGVASNRLKDKKVLVVLDGVDRSVQLDA 276

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           +A    WFG GSRIIIT++D  + + HGV+ +YK      D ALQ+F   +F    P   
Sbjct: 277 VAKEAWWFGPGSRIIITTQDRRIFRAHGVNHIYKVDFPTSDAALQIFCTYSFGQKSPKDG 336

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             +L+  + + +G LPL L V+GS+  G S  EW + + RL     S+I  IL+ S+D L
Sbjct: 337 FEELAREVTQLSGELPLGLRVMGSYFKGMSKQEWINAIPRLRTSLDSDIGSILKFSYDAL 396

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDL 297
            + +K +FL IAC +K    + V  +L          + VL++K LI++     + MH L
Sbjct: 397 DDEDKYLFLYIACCYKSEWINEVEEYLAKKFVEVRQRLNVLVDKSLISISLLGVIEMHSL 456

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLT-ESTGTELVEGIVLDNYHHENEVYLC 356
           L++LG++IV +QS +E G+R  L+ E EVC VLT ++TG++ V GI LD      E+ + 
Sbjct: 457 LKKLGREIVCKQS-QEPGQRQFLYDEREVCEVLTGDATGSKSVIGINLDYSREGKEIDI- 514

Query: 357 ASAKAFSKMTNLRLLKIC----NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
            S KAF  M+NL+ LK+      ++   GL YL ++LRLL W   P+   P N+  +  +
Sbjct: 515 -SEKAFEGMSNLQFLKVSCSHFTMKSTRGLSYLPHKLRLLKWSHCPMTCFPCNVNFEFLV 573

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
           E+ M  S++ +LW+  K L  LK M + +S+ L   PD + A NL++L L  C+ L ++ 
Sbjct: 574 ELSMSNSKLEKLWEVTKPLRSLKRMDMRNSKEL---PDLSTATNLKRLNLSNCSSLIKL- 629

Query: 473 PSLLLHNKLIILNMKDCTSLITLPGKILMK-SLEKLNLKSLPTTISGLKCLSTLDVSGDL 531
           PS L  N +  L +K C+SL+  P  I    +LE L+L SLP  +               
Sbjct: 630 PS-LPGNSMKELYIKGCSSLVEFPSFIGNAVNLETLDLSSLPNLL--------------- 673

Query: 532 KFREFPEIVEHMEHLSELHLEGTA-IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
              E P  VE+  +L +L L   + +  LP SI  L  L  L L+ C  LE+LP  + NL
Sbjct: 674 ---ELPSFVENATNLKKLDLRFCSNLVELPFSIGNLQKLWWLELQGCSKLEVLPTNI-NL 729

Query: 591 KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKN 650
           K L  L LS CS LK FP+I     +L +L L GT+I++VP SI      ++L +S  +N
Sbjct: 730 KSLYFLNLSDCSMLKSFPQIS---TNLEKLDLRGTAIEQVPPSIRSRPCSDILKMSYFEN 786

Query: 651 LVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPI 710
           L   P    AL+ +  L L+   +++ +P  + +I  L +L + G               
Sbjct: 787 LKESPH---ALERITELWLTDT-EIQELPPWVKKISRLSQLVVKGC-------------- 828

Query: 711 NLMRKSVALKLPSLSGLCSLRKLNLTDCNLME 742
              RK V+  +P LS   S+R ++ +DC  +E
Sbjct: 829 ---RKLVS--VPPLSD--SIRYIDASDCESLE 853



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 181/404 (44%), Gaps = 40/404 (9%)

Query: 484 LNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHM 543
             MK    L  LP K+ +       +   P  ++  + L  L +S   K  +  E+ + +
Sbjct: 535 FTMKSTRGLSYLPHKLRLLKWSHCPMTCFPCNVN-FEFLVELSMSNS-KLEKLWEVTKPL 592

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
             L  + +  +  + LP  +   + L  LNL NC SL  LP    N   ++ L + GCS 
Sbjct: 593 RSLKRMDMRNS--KELP-DLSTATNLKRLNLSNCSSLIKLPSLPGN--SMKELYIKGCSS 647

Query: 604 LKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
           L +FP  + +  +L  L L    ++ E+PS +E  T L+ L+L  C NLV LP SI  L+
Sbjct: 648 LVEFPSFIGNAVNLETLDLSSLPNLLELPSFVENATNLKKLDLRFCSNLVELPFSIGNLQ 707

Query: 663 SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINL----MRKSVA 718
            L  L L GC KLE +P  +  ++SL  L++S  ++  S   +  I  NL    +R +  
Sbjct: 708 KLWWLELQGCSKLEVLPTNIN-LKSLYFLNLSDCSMLKS---FPQISTNLEKLDLRGTAI 763

Query: 719 LKLPSLSGLCSLRKLNLTDCNLME--GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLS 776
            ++P      S+R    +D   M     L      L  + EL+L+      LP  +  +S
Sbjct: 764 EQVPP-----SIRSRPCSDILKMSYFENLKESPHALERITELWLTDTEIQELPPWVKKIS 818

Query: 777 KLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLL 836
           +L  + ++ C++L S+P L  +IR +  + C SL               MI C    + +
Sbjct: 819 RLSQLVVKGCRKLVSVPPLSDSIRYIDASDCESL--------------EMIECSFPNQFV 864

Query: 837 GNK-SLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEG 879
             K +  F + +E    +    +    V+PG ++P +F ++  G
Sbjct: 865 WLKFANCFKLNQEARNLIIQKSEF--AVLPGGQVPAYFTHRAIG 906


>gi|295083331|gb|ADF78119.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  345 bits (884), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 263/716 (36%), Positives = 384/716 (53%), Gaps = 70/716 (9%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR  ++  L+D  S D V MIGI G+GG+GK+T+A  VY+LI+  F+ S FL ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  LL ++L   + ++ +V  G  ++  RLQRKKVLL++DDV   +QLQ++
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G   WFG GSR+IIT+RD+ LL +HGV   Y+   LN + ALQL   K+FKT +     
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            ++   ++ YA GLPLALEV+GS L G+S++EW+S +++ +  P  +IL+IL++SFD L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNN------TL 292
           E +K +FLDIAC F   D   V + L    G      I VL+EK LI    +       +
Sbjct: 432 EEQKNVFLDIACCFNRYDLTEVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPIV 491

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD-NYHHEN 351
            MHDL++++G++IV+++SP+E  KRSRLW  E++ HVL ++ GT  +E I LD     + 
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKE 551

Query: 352 EVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           E+ +  + KAF KM NL+ L I N +   G +YL N LR+L W  YP   LPS+    K 
Sbjct: 552 EIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPNNLRVLEWWRYPSHCLPSDFHPKKL 611

Query: 412 IEIYMCYSRIGE-----LWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
               + +S I       LWK   +   L+++     E L ++PD +G PNLE+   E C 
Sbjct: 612 AICKLPFSCISSVELDGLWKMFVN---LRILNFDRCEGLTQIPDVSGLPNLEEFSFECCF 668

Query: 467 RLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLD 526
            L  +H S+   +KL ILN   C  L + P  I + SLEKLNL           C S   
Sbjct: 669 NLITVHNSIGFLDKLKILNAFRCKRLRSFP-PIKLTSLEKLNLSF---------CYS--- 715

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVT 586
                    FP+I+  ME++ +L L  ++I  LP S + L+GL  L L       I  V 
Sbjct: 716 ------LESFPKILGKMENIRQLCLSESSITELPFSFQNLAGLRGLELLFLSPHTIFKVP 769

Query: 587 VS-----NLKCLRSLKLSGCSKLK------KFPEIVRSMKD------------------- 616
            S      L  +R+L L G   LK      K   IV SM +                   
Sbjct: 770 SSIVLMPELTVIRALGLKGWQWLKQEEGEEKTGSIVSSMVEMLTVSSCNLCDEFFSIDFT 829

Query: 617 ----LSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
               + EL L   +   +P  I+    L +L++ DCK+L  +      LK    +N
Sbjct: 830 WFAHMKELCLSENNFTILPECIKECQFLRILDVCDCKHLREIRGIPPNLKHFFAIN 885



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 172/444 (38%), Gaps = 124/444 (27%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNL 651
            LR L    C  L + P+ V  + +L E   +   ++  V +SI  L KL++LN   CK L
Sbjct: 636  LRILNFDRCEGLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRL 694

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV------------- 698
               P   I L SL+ LNLS C+ LE+ P+ LG++E++ +L +S +++             
Sbjct: 695  RSFPP--IKLTSLEKLNLSFCYSLESFPKILGKMENIRQLCLSESSITELPFSFQNLAGL 752

Query: 699  ---------PHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRK----------------- 732
                     PH T +     I LM +   ++   L G   L++                 
Sbjct: 753  RGLELLFLSPH-TIFKVPSSIVLMPELTVIRALGLKGWQWLKQEEGEEKTGSIVSSMVEM 811

Query: 733  LNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSL 792
            L ++ CNL +     D      +KEL LS+N+F  LP  I     L  +++ DCK L+ +
Sbjct: 812  LTVSSCNLCDEFFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRILDVCDCKHLREI 871

Query: 793  PQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEA 852
              +PPN++      C SL +                           S     L + L  
Sbjct: 872  RGIPPNLKHFFAINCKSLTS---------------------------SSISKFLNQELHE 904

Query: 853  VSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS- 911
              NT       +PG  IPEWF  Q+ G SI+       + + K     +C +   +++  
Sbjct: 905  AGNT----VFCLPGKRIPEWFDQQSRGPSIS------FWFRNKFPDMVLCLIVAPIRSQF 954

Query: 912  -------RGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLS----RQTC 960
                    GN C                 Y   F     Q G  H +L  L     R + 
Sbjct: 955  FRPEVFINGNEC---------------SPYSCCF-----QKGMHHAYLCDLREIKFRNSP 994

Query: 961  YDIRLPLESNLEPFES--NHVNVS 982
            Y++         PFE+  NHVNV+
Sbjct: 995  YEV---------PFENGWNHVNVT 1009


>gi|297794589|ref|XP_002865179.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311014|gb|EFH41438.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1113

 Score =  345 bits (884), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 267/743 (35%), Positives = 387/743 (52%), Gaps = 98/743 (13%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLD---------NVREISSK--GG 64
           S +VR +GI G  G+GKTTIAR +Y   SH F+   FLD         N R+ +      
Sbjct: 200 SKEVRRVGIWGPSGIGKTTIARALYSQHSHVFDVCVFLDIHFVSKSTKNYRKGNPDDYNM 259

Query: 65  LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNRE 124
            + LQ+  LS++L   D  +    + + ++  RL+ +KVL+V+DD+ D   L +L G  E
Sbjct: 260 KLCLQKSFLSKILDQKDIEV----EHLGVIEERLKHQKVLIVLDDLDDQMVLDTLVGKDE 315

Query: 125 WFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSA 184
           WFG GSRII+ ++D+ LL+ HG++ +Y+    +  +AL++F   AF    P    V+L+ 
Sbjct: 316 WFGCGSRIIVITKDKRLLEAHGINHIYEVGFPSEKQALEMFCHSAFGQKSPDDGFVELAT 375

Query: 185 RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ-ELEK 243
            +   AGGLPL L++LG  +  R V+EW+  L  L+     +I   L++S+D +  +  +
Sbjct: 376 EVAARAGGLPLGLKILGKVMKNRKVEEWKGELLSLQKNQNGDIGKTLKVSYDKIDIQKHR 435

Query: 244 KIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH---NN--TLWMHDLL 298
            IF  IACFF G + D +   L         G+R L+EK LI+     NN  T+ MH L+
Sbjct: 436 AIFRHIACFFNGAEIDNIKLMLPELDVE--TGVRHLVEKSLISSKSSWNNTCTVDMHCLV 493

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD-NYHHENEVYLCA 357
           QE+G+Q+V+ QS EE G+R  L+  ++VC+VL  + GT  V GI LD N   E E++   
Sbjct: 494 QEMGKQLVRAQS-EEPGEREFLFDSDDVCNVLGGTNGTNKVIGISLDLNEIDELEIH--- 549

Query: 358 SAKAFSKMTNLRLLKI----------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
             KAF  M NLR L+               LP  ++    +L+LL W GYP+K LP+  +
Sbjct: 550 -KKAFKNMHNLRFLRFHINSWEREKEVEWNLPKKIDAFPPKLKLLNWPGYPMKQLPAEFR 608

Query: 408 MDKTIEIYMCYSRIGE-LWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
            DK +E+ M  S+I E LW+G K L  LK M LS S NL  +PD + A NLE L L GC+
Sbjct: 609 PDKLVELRMPNSKILEKLWEGDKSLKFLKDMDLSGSLNLKEIPDLSKATNLETLNLNGCS 668

Query: 467 RLYEIHPSLLLHNKLIILNMKDCTSLITLP-GKILMKSLEKLNLK--------------- 510
            L E+  S+L  NKL  LNM  CT+L  LP GK  ++SL  LNL                
Sbjct: 669 SLVELPSSILNLNKLTDLNMAGCTNLEALPTGK--LESLIHLNLAGCSRLKIFPDISNKI 726

Query: 511 -------------------------SLPTTIS--------GLKCLSTLDVSGDLKFREFP 537
                                    SL  T+S         L  L T+ + G    +E P
Sbjct: 727 SELIINKTAFEIFPSQLRLENLVELSLEHTMSERLWEGVQPLTNLKTIKLLGSENLKELP 786

Query: 538 EIVEHMEHLSELHLEG-TAIRGLPLS-IELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
            +      L  L+L   +++  L LS I+ L+ L  L++  C SLE LP+ + NLK L  
Sbjct: 787 NL-SMATSLETLNLNNCSSLVELTLSTIQNLNKLTSLDMIGCSSLETLPIGI-NLKSLYR 844

Query: 596 LKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           L L+GCS+L+ FP+I     +++ LFL+ T+I+EVPS I   + LE L +  CK L  + 
Sbjct: 845 LNLNGCSQLRGFPDISN---NITFLFLNQTAIEEVPSHINNFSSLEALEMMGCKELKWIS 901

Query: 656 SSIIALKSLKTLNLSGCFKLENV 678
             +  LK L  +  S C KL  V
Sbjct: 902 PGLFELKDLDEVFFSDCKKLGEV 924



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 136/512 (26%), Positives = 234/512 (45%), Gaps = 90/512 (17%)

Query: 519  LKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNC 577
            LK L  +D+SG L  +E P++ +   +L  L+L G +++  LP SI  L+ L  LN+  C
Sbjct: 633  LKFLKDMDLSGSLNLKEIPDLSK-ATNLETLNLNGCSSLVELPSSILNLNKLTDLNMAGC 691

Query: 578  RSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIEL- 636
             +LE LP     L+ L  L L+GCS+LK FP+I      +SEL ++ T+ +  PS + L 
Sbjct: 692  TNLEALPT--GKLESLIHLNLAGCSRLKIFPDISNK---ISELIINKTAFEIFPSQLRLE 746

Query: 637  ---------------------LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
                                 LT L+ + L   +NL  LP+  +A  SL+TLNL+ C  L
Sbjct: 747  NLVELSLEHTMSERLWEGVQPLTNLKTIKLLGSENLKELPNLSMA-TSLETLNLNNCSSL 805

Query: 676  ENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNL 735
              V  TL  I++L +L                  ++++  S    LP    L SL +LNL
Sbjct: 806  --VELTLSTIQNLNKL----------------TSLDMIGCSSLETLPIGINLKSLYRLNL 847

Query: 736  TDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSL-PQ 794
              C+ + G  P DI N  ++  L+L++ +   +P+ I + S L  +E+  CK L+ + P 
Sbjct: 848  NGCSQLRG-FP-DISN--NITFLFLNQTAIEEVPSHINNFSSLEALEMMGCKELKWISPG 903

Query: 795  L--PPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEA 852
            L    ++ +V  + C  L  +  + K   +  ++I+  +   +  N+ +         ++
Sbjct: 904  LFELKDLDEVFFSDCKKLGEVKWSEKAEDTKLSVISFTNCFYI--NQEIFIH------QS 955

Query: 853  VSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVL---- 908
             SN      +++PG E+P +F +++ G+S+T+    +  +++  + +  C V   L    
Sbjct: 956  ASNY-----MILPG-EVPPYFTHRSTGNSLTIPLHHSSLSQQPFLDFKACVVVSDLVVGS 1009

Query: 909  KNSRGNNCFGSYPTHQLNCHI--GHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLP 966
            +      CF     H   CH    HG Y   F     +  S H      + Q  +D R P
Sbjct: 1010 EAVVKKLCFMDIEVH---CHFIDKHGNY---FEPAERKDLSVH---QKYNHQIIFDCRFP 1060

Query: 967  LESNLEPFESNHVNVSFEPWLGQGLEVKMCGL 998
            L       + + V + F     + L++K CG+
Sbjct: 1061 LN-----LDCDQVQIKF-LLPNERLKLKRCGV 1086



 Score = 43.1 bits (100), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 40/268 (14%)

Query: 574 LKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSS 633
            KN  +L  L   +++ +  + ++ +   K+  FP        L  L   G  +K++P+ 
Sbjct: 553 FKNMHNLRFLRFHINSWEREKEVEWNLPKKIDAFP------PKLKLLNWPGYPMKQLPAE 606

Query: 634 IELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDI 693
                KL  L + + K L +L     +LK LK ++LSG   L+ +P+ L +  +LE L++
Sbjct: 607 FRP-DKLVELRMPNSKILEKLWEGDKSLKFLKDMDLSGSLNLKEIPD-LSKATNLETLNL 664

Query: 694 SGTA----VPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDI 749
           +G +    +P S    + +    M     L+      L SL  LNL  C+ ++  +  DI
Sbjct: 665 NGCSSLVELPSSILNLNKLTDLNMAGCTNLEALPTGKLESLIHLNLAGCSRLK--IFPDI 722

Query: 750 GNLCSLKELYLSKNSFVSLPT----------SITH------------LSKLLNIELEDCK 787
            N   + EL ++K +F   P+          S+ H            L+ L  I+L   +
Sbjct: 723 SN--KISELIINKTAFEIFPSQLRLENLVELSLEHTMSERLWEGVQPLTNLKTIKLLGSE 780

Query: 788 RLQSLPQL--PPNIRQVRVNGCASLVTL 813
            L+ LP L    ++  + +N C+SLV L
Sbjct: 781 NLKELPNLSMATSLETLNLNNCSSLVEL 808


>gi|297804918|ref|XP_002870343.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316179|gb|EFH46602.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 966

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 288/858 (33%), Positives = 436/858 (50%), Gaps = 94/858 (10%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEAS-GFLDNVRE 58
           M +  E L  L++  ++D VRMI I GMGG+GKTTIA+ +Y+   H F     F+ NVR+
Sbjct: 97  MKTHVEGLSPLLNMDANDEVRMIEIWGMGGIGKTTIAKYIYEQYKHRFSPHFCFIPNVRK 156

Query: 59  ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
           ISSK GL+ LQ +L+S +L      +W+V  G   + SRL   KV +V+DDV DV QL +
Sbjct: 157 ISSKHGLLYLQEKLISNILGEEHVKLWSVEQGAHCIKSRLGHLKVFIVLDDVDDVNQLYA 216

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTH-GVD-EVYKPHGLNYDEALQLFNMKAFKTYQPL 176
           LA   +WFG GSRII+T+RD+ LL    GV   VY    ++ D A++LF   AF+   P 
Sbjct: 217 LAKEAKWFGLGSRIIVTTRDKSLLNNFCGVRIFVYDVKCMDNDNAIKLFEQVAFEGGHPP 276

Query: 177 QECVQ-LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
               + LS R+ R A GLPLALE  G +L G+S+ EW+  L+  E  P   I+ IL+IS+
Sbjct: 277 SHVYKDLSNRVSRLAQGLPLALEAFGFYLHGKSLMEWKDGLKSFEEAPYENIMSILKISY 336

Query: 236 DGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWM 294
           D L EL K  FL +AC F G+    VT  L+ CG     GIR L+EK LI +  +  + M
Sbjct: 337 DNLDELGKTAFLHVACLFNGDPVLRVTTLLD-CG---RFGIRDLVEKSLIDISTDGCIAM 392

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD------NYH 348
           H L+++ G+ IV ++S     K+  LW  +++  VL    GT  +EG+ LD      ++H
Sbjct: 393 HGLVEQTGRHIVCQESGNRPAKQRILWHPDDIYRVLANYAGTRKIEGVALDVCVLPYSFH 452

Query: 349 HENEVYLCASAKAFSKMTNLRLLKI------CNLQLPNGLE---YLSNRLRLLGWRGYPL 399
            E          A   M NL+ LKI         ++   LE    +S +LRLL W  Y  
Sbjct: 453 IE--------WNALEPMYNLKFLKIYKHSKGSESRIRRNLEENPIVSRKLRLLHWDAYSY 504

Query: 400 KFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEK 459
             LPS +  D  +E+ +CYS++  LW G+  L  L+ + L+  E+L  +PD   A  LE+
Sbjct: 505 TTLPSKVSPDCLVELNLCYSKLTSLWSGVPRLLHLRRLDLTGCEDLKELPDLHEAVCLEE 564

Query: 460 LILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKS-------- 511
           LILEGC  L  I  S+   +++  L++ +C  L  L  +I+++  E    +S        
Sbjct: 565 LILEGCISLQRIPKSIWGLSRVKKLDVSNCDGLKNL--RIILRESESTVFQSSISGMCLH 622

Query: 512 -----------LPTTISGLKCLSTLDVSGDLKFR-EFPE-IVEHMEHLSELHLEGTAIRG 558
                       P    G+  +  L ++G++K + E  E   EH+  LSE  +    +  
Sbjct: 623 VRLIHMEVLDPTPYEFEGIS-IPNLSINGEIKIKLELLEGYAEHLCFLSEQEIPHELMML 681

Query: 559 LPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLS 618
              + +L+S        N +SL+I+        C     L  C     FP        L 
Sbjct: 682 ENQTPKLMSSPY-----NFKSLDIM-----RFICSERSNLFKCYSFSDFPW-------LR 724

Query: 619 ELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
           +L L   +I+E+P  I  +  LE L+LS       LP+++I L +LK L L  C +LE +
Sbjct: 725 DLNLINLNIEEIPDDIHHMMVLEKLDLSG-NGFRVLPTTMILLTNLKHLTLCNCCRLETL 783

Query: 679 PETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDC 738
           P+ L Q+E+L   D +                 L+  S A +    S  C L +L L +C
Sbjct: 784 PD-LYQLETLTLSDCTNLQA-------------LVNLSDAQQ--DQSRYC-LVELWLDNC 826

Query: 739 NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ-LPP 797
             ++ +L   +    SL  L +S++ F ++PTSI  L  L+ + L  CK+L+SL + LP 
Sbjct: 827 KNVQ-SLSDQLTRFKSLTYLDISRHDFETVPTSIKDLPLLVTLCLNYCKKLKSLKEVLPL 885

Query: 798 NIRQVRVNGCASLVTLLD 815
           +++ +  +GC SL   ++
Sbjct: 886 SLKYLYAHGCKSLDAFIE 903


>gi|357521387|ref|XP_003630982.1| NBS-LRR resistance-like protein [Medicago truncatula]
 gi|355525004|gb|AET05458.1| NBS-LRR resistance-like protein [Medicago truncatula]
          Length = 1177

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 289/959 (30%), Positives = 448/959 (46%), Gaps = 177/959 (18%)

Query: 32   KTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGI 91
            KTTIA  +Y  ++ +F  +  + NV++   + GL  +Q +   +LL   +N   N   G+
Sbjct: 153  KTTIASAIYRKLATQFSFNSIILNVQQEIERFGLHHIQSKYRFELL--GEN---NTSSGL 207

Query: 92   DM-LGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEV 150
             +    RL+  K LLV+DDV +  QL+ L G    F  GSRII+TSRD  +LK    D +
Sbjct: 208  CLSFDQRLKWTKALLVLDDVNNSDQLRDLIGKLSKFAPGSRIIVTSRDMQVLKNVKADGI 267

Query: 151  YKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVD 210
            Y+   +N+ E+L+LF + AFK   PL+  V LS  I+ YA  +PLAL+VLG  L GR  +
Sbjct: 268  YEVKEMNFHESLRLFCLNAFKQSYPLEGYVGLSENILNYAKRVPLALKVLGFLLCGRPKE 327

Query: 211  EWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGF 270
             W S L++L+  P ++I ++L++S+  L E + +IFLDIACF++G+  + V   L+ CGF
Sbjct: 328  AWESQLQKLDKLPENDIFEVLKLSYVELDEEQNEIFLDIACFYRGHLENVVLQTLDSCGF 387

Query: 271  HPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVL 330
              +IGI VL ++ LI++  + + MHDL+QE+G +IV +Q   + GKRSRLWK  E+  VL
Sbjct: 388  SSLIGIEVLKDRGLISIVESRIVMHDLIQEMGHEIVHQQCVNDPGKRSRLWKHREIYKVL 447

Query: 331  TESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLL---------KICNLQLPNG 381
              + GT+ +  I+LD    E +V L   A+ F KM NLR++         K  N+ LP  
Sbjct: 448  RNNKGTDAIRCILLDICKIE-KVQL--HAETFKKMDNLRMMLFYKPYGVSKESNVILPAF 504

Query: 382  LEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSH 441
            LE L + L+ L W G+P K LP +   D  +++YM +S + +LW+               
Sbjct: 505  LESLPDDLKFLRWDGFPQKSLPEDFFPDNLVKLYMPHSHLKQLWQ--------------R 550

Query: 442  SENLIRMPDFTGAPNLEKLI-------LEGCTRLYEIH-PSLLLHNKLIILNMKDCTSLI 493
             +NLI++PD   A  L+  +       L  C  L  +H PS +L     +  +  C+SL 
Sbjct: 551  DKNLIQIPDLVNAQILKNFLSKLKCLWLNWCISLKSVHIPSNILQTTSGLTVLHGCSSLD 610

Query: 494  TL-------------PGKILMKSLEKLNL------KSLP----TTISGLKC--------- 521
                           P  I M   ++L +      +S+P     T   L           
Sbjct: 611  MFVVGNEKMRVQRATPYDINMSRNKRLRIVATAQNQSIPPLESNTFEPLDFVVLNKEPKD 670

Query: 522  ---LSTLDVSGDLKFREFPEIVE----HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL 574
               L +L+V  +     FP + E     + H   L  +   I  LP S++ L GL  L+L
Sbjct: 671  NIQLLSLEVLREGSPSLFPSLNELCWLDLSHCDSLLRD--CIMELPSSLQHLVGLEELSL 728

Query: 575  KNCRSLEILPVTVSNLKCLRSLKLS-----------------------GCSKLKKFPEIV 611
              CR LE +P ++ +L  L  L L+                       GCS LK FP+I+
Sbjct: 729  CYCRELETIPSSIGSLSKLSKLDLTYCESLETFPSSIFKLKLKKLDLHGCSMLKNFPDIL 788

Query: 612  RSMKDLSELFLDGTSIKEVPSSIEL-LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLS 670
               +    + L  T+IKE+PSS+E  L  L+ L L  C +LV LP+S++ L  L  ++ S
Sbjct: 789  EPAETFVHINLTKTAIKELPSSLEYNLVALQTLCLKLCSDLVSLPNSVVNLNYLSEIDCS 848

Query: 671  GCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSL 730
            GC  L  +P  +G + SL +L +  + V +                              
Sbjct: 849  GCCSLTEIPNNIGSLSSLRKLSLQESNVVN------------------------------ 878

Query: 731  RKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQ 790
                          LP  I NL +LK L                       +L  CKRL+
Sbjct: 879  --------------LPESIANLSNLKSL-----------------------DLSFCKRLE 901

Query: 791  SLPQLPPNIRQVRVNGCASLVTLLDALKL----CKSDSTMIACLDSLKLLGNKSLAFSML 846
             +PQLP ++ Q+    C S+  ++   +L       +   I    + + L     +    
Sbjct: 902  CIPQLPSSLNQLLAYDCPSVGRMMPNSRLELSAISDNDIFIFHFTNSQELDETVCSNIGA 961

Query: 847  REYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPS-NLYNKKKLVGYAICCV 904
              +L       + L    PGS +P  F Y+  GS +T+ + S +  N  +L G+A+C V
Sbjct: 962  EAFLRITRGAYRSLFFCFPGSAVPGRFPYRCTGSLVTMEKDSVDCPNNYRLFGFALCVV 1020


>gi|357456781|ref|XP_003598671.1| Resistance protein [Medicago truncatula]
 gi|355487719|gb|AES68922.1| Resistance protein [Medicago truncatula]
          Length = 1158

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 243/701 (34%), Positives = 358/701 (51%), Gaps = 49/701 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++ R  K+ + M     +V MIGICG+ G+GKTT+AR VYD I  +FE   FL NVRE S
Sbjct: 292 LEPRVSKILYRMQMSDPNVVMIGICGVAGIGKTTLARAVYDSIGQQFEGLCFLCNVREYS 351

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +K GL  LQ+ +LS ++    N + N  DGI +L  +LQ K++LL++DDV  + QL++LA
Sbjct: 352 TKYGLAYLQQVILSDMVGENIN-LRNEIDGISILIRKLQSKRILLILDDVDKLDQLKNLA 410

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G   WFG GSRIIIT+R + +L  HGV  +Y     +Y EAL   +  A K   P     
Sbjct: 411 GAPSWFGCGSRIIITTRHKDILAAHGVGNIYDVPIFDYHEALHFLSAVASKIPNP----E 466

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            +  R I YA GLPL L+V+ S L  +S DEW  +L+R E         I ++S++ L E
Sbjct: 467 GVWDRAISYARGLPLVLKVIASDLFEKSTDEWEISLDRYEKVRNEGTQSIFEVSYNSLNE 526

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQ 299
            EK+IF+DIACFF      YV   L  CGF+   G   L ++ LI++  +  L +HD + 
Sbjct: 527 CEKRIFIDIACFFNRETFSYVKEILSACGFYTKYGFDRLKDRSLISITPSGRLLVHDHII 586

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
            +   IV ++SP    KRSRLW  E+V  VL E+ G +  E ++LDN        L  S 
Sbjct: 587 GMAMNIVHQESPMNPCKRSRLWLPEDVLQVLDENAGNDKTEVMILDNLPQGEVEKL--SD 644

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           KAF +M +LR+L I +      L++L N LR+L W GYP   LP +         ++   
Sbjct: 645 KAFKEMKSLRILIINDAIYSEVLQHLPNSLRVLYWSGYPSWCLPPD---------FVNLP 695

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
               ++   K++  L  +  +    L  +PD + APNL  L L+ C  + +IH S+   +
Sbjct: 696 SKCLIFNKFKNMRSLVSIDFTDCMFLREVPDMSAAPNLMTLYLDNCINITKIHDSVGFLD 755

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
            L  L    CTSL T+P               +   +S L+ LS  + S   K   FPEI
Sbjct: 756 NLEELTATGCTSLETIP---------------VAFELSSLRVLSFSECS---KLTRFPEI 797

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
           +  +E+L  ++L  TAI  LP SI  ++GL +L L +C  L+ LP ++  L  L+ ++  
Sbjct: 798 LCKIENLQHINLCQTAIEELPFSIGNVTGLEVLTLMDCTRLDKLPSSIFTLPRLQEIQAD 857

Query: 600 GCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVR------ 653
            C       E       L+   +    I    SS  L  +   + LS   N+V       
Sbjct: 858 SCKGFGISTEFEEDNGPLN-FTVCPNKIHLHLSSCNLTDEHLFICLSGFANVVHLDISYS 916

Query: 654 ----LPSSIIALKSLKTLNLSGCFKLEN---VPETLGQIES 687
               LP  I    +LK L L+ C +L+    +P+ L +I++
Sbjct: 917 NFTVLPPCIKQCINLKALVLTNCMQLQEISAIPQNLREIDA 957



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 173/396 (43%), Gaps = 78/396 (19%)

Query: 518  GLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTA-IRGLPLSIELLSGLVLLNLKN 576
             ++ L ++D +  +  RE P++     +L  L+L+    I  +  S+  L  L  L    
Sbjct: 706  NMRSLVSIDFTDCMFLREVPDM-SAAPNLMTLYLDNCINITKIHDSVGFLDNLEELTATG 764

Query: 577  CRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIEL 636
            C SLE +PV    L  LR L  S CSKL +FPEI+  +++L  + L  T+I+E+P SI  
Sbjct: 765  CTSLETIPVAFE-LSSLRVLSFSECSKLTRFPEILCKIENLQHINLCQTAIEELPFSIGN 823

Query: 637  LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD--IS 694
            +T LE+L L DC  L +LPSSI  L  L+ +    C       +  G     EE +  ++
Sbjct: 824  VTGLEVLTLMDCTRLDKLPSSIFTLPRLQEIQADSC-------KGFGISTEFEEDNGPLN 876

Query: 695  GTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCS 754
             T  P+                                L+L+ CNL +  L   +    +
Sbjct: 877  FTVCPNKI-----------------------------HLHLSSCNLTDEHLFICLSGFAN 907

Query: 755  LKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLL 814
            +  L +S ++F  LP  I     L  + L +C +LQ +  +P N+R++  + C SL +  
Sbjct: 908  VVHLDISYSNFTVLPPCIKQCINLKALVLTNCMQLQEISAIPQNLREIDASNCTSLTS-- 965

Query: 815  DALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFM 874
                  +S S +++                  + Y E    T     V++PGS IPEWF 
Sbjct: 966  ------QSQSVLLS------------------QAYHETGEKT-----VMLPGSSIPEWFD 996

Query: 875  YQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKN 910
            + +   SI+       Y +K+     +C VF + +N
Sbjct: 997  HSSSERSIS------FYARKRFPRICVCVVFGMSEN 1026


>gi|227438245|gb|ACP30612.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 886

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 240/679 (35%), Positives = 371/679 (54%), Gaps = 73/679 (10%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLIS----HEFEASGFLDNVR------EISSKGGL 65
           S++VRMIGI G  G+GKTTIAR +Y  +S      F+ + F++NV+      E+      
Sbjct: 214 SNEVRMIGIWGPIGIGKTTIARALYSQLSAAADDNFQLNIFMENVKGSCRRNELDGYSLK 273

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
           + LQ + LS++    D  I      + +   RL+ +K L+V+DDV +++QL +LA   +W
Sbjct: 274 LHLQERFLSEIFNKRDIKI----SHLGVAQERLKNQKALIVLDDVDELQQLHALADQTQW 329

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSAR 185
           FG+G+RII+T+ D+ LLK HG+  VY+    + DEA ++    AF      +    L+  
Sbjct: 330 FGNGTRIIVTTEDKQLLKAHGISHVYEVGFPSKDEAFKILCRYAFGQNSAPEGFYDLAVE 389

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           + + +G LPL+L VLG+ L G S +EW   L RL      +I  +L + +D L E ++ I
Sbjct: 390 VSQLSGNLPLSLSVLGASLRGVSKEEWTKALPRLRTSLNGKIEKVLGVCYDSLDEKDRLI 449

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELGQQ 304
           FL IAC F G   + V  FL         G++VL+++ L+ +  +  + MH LLQ++G++
Sbjct: 450 FLHIACLFNGEKVERVIQFLAKSELEVEFGLKVLVDRSLLHICDDGNIVMHCLLQQMGKE 509

Query: 305 IVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSK 364
           I++ Q  +E GKR  L   +++  VL ++TGTE V GI LD     ++V  C S KAF +
Sbjct: 510 IIRGQCIDEPGKRKFLVDAKDISDVLVDATGTETVLGISLDMSKINDDV--CISEKAFDR 567

Query: 365 MTNLRLLKI-CNLQ-------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
           M NL+ L++  N Q       LP+GL+ L ++LRLL W  YP+K +PS  + +  +E+ M
Sbjct: 568 MHNLQFLRLYTNFQDESFKLCLPHGLDRLPHKLRLLHWDSYPIKCMPSRFRPEFLVELSM 627

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             S++ +LW+GI+ L  LK M LS S  +  +P+ + A NLEKL L  C  L  +  SL 
Sbjct: 628 RDSKLEKLWEGIQPLTSLKQMDLSASTKIKDIPNLSKATNLEKLYLRFCKALASVPSSLQ 687

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
             NKL +L+M  C  L  LP  + ++SL  LN+K                  G  K R F
Sbjct: 688 NLNKLKVLDMSSCVRLNALPTNMNLESLSVLNMK------------------GCSKLRIF 729

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
           PEI   ++ +S   +  TAI  +PLSI L   L+                        SL
Sbjct: 730 PEISSQVKFMS---VGETAIEEVPLSISLWPQLI------------------------SL 762

Query: 597 KLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPS 656
           ++SGC KLK FP++  S++ L    L  T I+E+P  IE  ++L ++ +++CK L  +P 
Sbjct: 763 EMSGCKKLKTFPKLPASVEVLD---LSSTGIEEIPWGIENASQLLIMCMANCKKLKCVPP 819

Query: 657 SIIALKSLKTLNLSGCFKL 675
           SI  +K L+ ++LSGC +L
Sbjct: 820 SIYKMKHLEDVDLSGCSEL 838



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 127/249 (51%), Gaps = 30/249 (12%)

Query: 602 SKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           SKL+K  E ++ +  L ++ L   T IK++P+ +   T LE L L  CK L  +PSS+  
Sbjct: 630 SKLEKLWEGIQPLTSLKQMDLSASTKIKDIPN-LSKATNLEKLYLRFCKALASVPSSLQN 688

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA----VPHSTSWYSYIPINLMRKS 716
           L  LK L++S C +L  +P  +  +ESL  L++ G +     P  +S   ++ +    ++
Sbjct: 689 LNKLKVLDMSSCVRLNALPTNMN-LESLSVLNMKGCSKLRIFPEISSQVKFMSVG---ET 744

Query: 717 VALKLP-SLSGLCSLRKLNLTDCNLMEG--ALPSDIGNLCSLKELYLSKNSFVSLPTSIT 773
              ++P S+S    L  L ++ C  ++    LP+      S++ L LS      +P  I 
Sbjct: 745 AIEEVPLSISLWPQLISLEMSGCKKLKTFPKLPA------SVEVLDLSSTGIEEIPWGIE 798

Query: 774 HLSKLLNIELEDCKRLQSLPQLPPNIRQVR------VNGCASLVTLLDA--LKLCKSDST 825
           + S+LL + + +CK+L+    +PP+I +++      ++GC+ L  LL +   + C+  +T
Sbjct: 799 NASQLLIMCMANCKKLKC---VPPSIYKMKHLEDVDLSGCSELRPLLSSRVFEKCRKRNT 855

Query: 826 MIACLDSLK 834
              C  S K
Sbjct: 856 KKNCNGSRK 864


>gi|357499537|ref|XP_003620057.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355495072|gb|AES76275.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1060

 Score =  344 bits (883), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 234/664 (35%), Positives = 366/664 (55%), Gaps = 63/664 (9%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + SR ++++ L+D GS D V M+GI G+GGLGK+T+AR +Y+ ++ +FE S FL +VRE 
Sbjct: 200 LQSRVQQVKSLLDEGSDDGVHMVGIYGIGGLGKSTLARQIYNFVADQFEGSCFLHDVREN 259

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S++  L  LQ +LL +   L +  + +V +GI ++  RL RKK+LL++DDV ++KQL +L
Sbjct: 260 SAQNNLKYLQEKLLLKTTGL-EIKLDHVSEGIPVIKERLCRKKILLILDDVDNLKQLHAL 318

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG GSR+IIT+R++ LL +HG++  +   GLN  EAL+L    AFK+ +     
Sbjct: 319 AGGLDWFGCGSRVIITTRNKDLLSSHGIESTHAVEGLNETEALELLRWMAFKSDKVPSGY 378

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R + YA GLPL LEV+GS L G+S+++W+ TL+  +  P  EI  IL++S+D L+
Sbjct: 379 EDILNRAVAYAFGLPLVLEVVGSNLFGKSIEDWKHTLDGYDRIPNKEIQKILKVSYDALE 438

Query: 240 ELEKKIFLDIACFFKGND----RDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN------ 289
           E E+ +FLDIAC FKG       D +    + C  H    + VL  K L+ +        
Sbjct: 439 EEEQSVFLDIACCFKGYQWKEFEDILCAHYDHCITH---HLGVLAGKSLVKISTYYPSGS 495

Query: 290 -NTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYH 348
            N + +HDL++++G+++V+++SP+E G+RSRLW++E++ HVL E+TGT  +E I ++   
Sbjct: 496 INDVRLHDLIKDMGKEVVRQESPKEPGERSRLWRQEDIIHVLKENTGTSKIEMIYMN--L 553

Query: 349 HENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQM 408
           H  E  +    KAF KMT L+ L I N     GL+YL + LR+L W+G   K L S++  
Sbjct: 554 HSMESVIDKKGKAFKKMTKLKTLIIENGLFSGGLKYLPSSLRVLKWKGCLSKCLSSSILN 613

Query: 409 DKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
            K                       +KV+ L + E L  +PD +G  NLEKL    C  L
Sbjct: 614 KK--------------------FQNMKVLTLDYCEYLTHIPDVSGLSNLEKLSFTCCDNL 653

Query: 469 YEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI-SGLKCLSTLDV 527
             IH S+   NKL  L+   C  L         +    L L SL   I    +CL     
Sbjct: 654 ITIHNSIGHLNKLEWLSAYGCRKL---------EHFRPLGLASLKKLILYECECLDN--- 701

Query: 528 SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
                   FPE++  M H+ E+ +  T+I  LP S + LS L  L + +   ++   +  
Sbjct: 702 --------FPELLCKMAHIKEIDISNTSIGELPFSFQNLSELHELTVTS--GMKFPKIVF 751

Query: 588 SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
           SN+  L SL     S  +  P +++   +++ L L  ++ K +P  +     L  +N+  
Sbjct: 752 SNMTKL-SLSFFNLSD-ECLPIVLKWCVNMTHLDLSFSNFKILPECLRECHHLVEINVMC 809

Query: 648 CKNL 651
           C++L
Sbjct: 810 CESL 813



 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 138/288 (47%), Gaps = 11/288 (3%)

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
           L +++   D K + F ++ +    + E  L    ++ LP S+ +L     L+   C S  
Sbjct: 553 LHSMESVIDKKGKAFKKMTKLKTLIIENGLFSGGLKYLPSSLRVLKWKGCLS--KCLSSS 610

Query: 582 ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKL 640
           IL     N+K L    L  C  L   P+ V  + +L +L F    ++  + +SI  L KL
Sbjct: 611 ILNKKFQNMKVL---TLDYCEYLTHIPD-VSGLSNLEKLSFTCCDNLITIHNSIGHLNKL 666

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
           E L+   C+ L       + L SLK L L  C  L+N PE L ++  ++E+DIS T++  
Sbjct: 667 EWLSAYGCRKLEHFRP--LGLASLKKLILYECECLDNFPELLCKMAHIKEIDISNTSIGE 724

Query: 701 -STSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELY 759
              S+ +   ++ +  +  +K P +    ++ KL+L+  NL +  LP  +    ++  L 
Sbjct: 725 LPFSFQNLSELHELTVTSGMKFPKIV-FSNMTKLSLSFFNLSDECLPIVLKWCVNMTHLD 783

Query: 760 LSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGC 807
           LS ++F  LP  +     L+ I +  C+ L+ +  +PPN++++    C
Sbjct: 784 LSFSNFKILPECLRECHHLVEINVMCCESLEEIRGIPPNLKELCARYC 831


>gi|357499687|ref|XP_003620132.1| Resistance protein [Medicago truncatula]
 gi|355495147|gb|AES76350.1| Resistance protein [Medicago truncatula]
          Length = 1608

 Score =  344 bits (882), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 293/978 (29%), Positives = 458/978 (46%), Gaps = 211/978 (21%)

Query: 1    MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            ++ + + L  L++ GS D V M+GI GMGG+GKTT+A  VY+LI+HEF+AS FL+NVRE 
Sbjct: 185  LEHQKQHLTSLLNIGSDDTVHMVGIHGMGGIGKTTLALSVYNLIAHEFDASCFLENVREN 244

Query: 60   SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
              K GL  LQ  +LS+++    N++  V  GI +L  RL++KK+LL++DDV + +QL++L
Sbjct: 245  HEKHGLPYLQNIILSKVVG-EKNALTGVRQGISILEQRLRQKKLLLILDDVNEQEQLKAL 303

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKT-YQPLQE 178
            AG  +WFG  SRIIIT+RD+ LL  HGV+  Y+  GLN  +A +L   KAFK  + P  E
Sbjct: 304  AGKHKWFGPSSRIIITTRDKKLLTCHGVEHTYEVRGLNAKDAFELVRWKAFKDEFSPSDE 363

Query: 179  CVQLSA-----RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
             V L+      R++ YA G PLALEV+GS  S +++++ +  L+R E  P  +I   LQI
Sbjct: 364  NVSLAQLHVIERVVAYASGHPLALEVMGSHFSNKTIEQCKDALDRYEKVPHKKIQTTLQI 423

Query: 234  SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIG-IRVLIEKCLITVHN-NT 291
            SFD L++ EK +FLDIAC FKG     V   L       V   I VL+EK LI ++    
Sbjct: 424  SFDALEDEEKFVFLDIACCFKGCKLTRVDEILHAHHGEIVKDHINVLVEKSLIKINEFGN 483

Query: 292  LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTEST---------GTELVEGI 342
            + +HDL++++G++IV+++SP++ GKR+RLW   ++  VL E+T         GT  +E I
Sbjct: 484  VTLHDLVEDMGKEIVRQESPQDPGKRTRLWFSNDIMQVLEENTVSNNVMDNLGTSQIEII 543

Query: 343  VLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFL 402
              D          C +  A+                    ++L N LR+L        FL
Sbjct: 544  RFD----------CWTTVAWDG----------EFFFKKSPKHLPNSLRVLECHNPSSDFL 583

Query: 403  PSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
             +                +  L    K+   ++V+ L     L+++P+ +G  NLEKL +
Sbjct: 584  VA----------------LSLLNFPTKNFQNMRVLNLEGGSGLVQIPNISGLSNLEKLSI 627

Query: 463  EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNL------KSLPTTI 516
            + C +L  I  S+    KL IL + +C  + ++P  +++ SL +L+L      +S P  +
Sbjct: 628  KNCWKLIAIDKSVGFLGKLKILRLINCIEIQSIP-PLMLASLVELHLSGCNSLESFPPVL 686

Query: 517  SG-----------------------LKCLSTLDVSGDLKFREFPEIVE-HMEHLSELHLE 552
             G                       L  L TLD+S       FP +V+  +  L  L+++
Sbjct: 687  DGFGDKLKTMNVIYCKMLRSIPPLKLNSLETLDLSQCYSLENFPLVVDAFLGKLKTLNVK 746

Query: 553  GT-----------------------AIRGLPLSIELLSG--------------------- 568
            G                        ++   PL ++   G                     
Sbjct: 747  GCCKLTSIPPLKLNSLETLDLSQCYSLENFPLVVDAFLGKLKTLNVESCHNLKSIQPLKL 806

Query: 569  --LVLLNLKNCRSLEILPVTVS---------------NLKCLRSLKL--------SGCSK 603
              L+ LNL +C +LE  P  V                NLK +  LKL        S C +
Sbjct: 807  DSLIYLNLSHCYNLENFPSVVDEFLGKLKTLCFAKCHNLKSIPPLKLNSLETLDFSSCHR 866

Query: 604  LKKFPEIVR---------------SMKDLSELFLDG---------TSIKEVPSSIE-LLT 638
            L+ FP +V                ++K +  L LD           S++  P  ++ LL 
Sbjct: 867  LESFPPVVDGFLGKLKTLLVRKCYNLKSIPPLKLDSLEKLDLSCCCSLESFPCVVDGLLD 926

Query: 639  KLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL-----EELDI 693
            KL+ LN+  C  L  +P   + L SL+  NLS C+ LE+ PE LG++ ++     ++  I
Sbjct: 927  KLKFLNIECCIMLRNIPR--LRLTSLEYFNLSCCYSLESFPEILGEMRNIPGLLKDDTPI 984

Query: 694  SGTAVPHST---------SWYSYIP----------INLMRKSVALKLPSLSGLCSLRKLN 734
                 P  T           Y Y+P          I    K  A++   +  +C +R + 
Sbjct: 985  KEIPFPFKTLTQPQTLCDCGYVYLPNRMSTLAKFTIRNEEKVNAIQSSHVKYIC-VRHVG 1043

Query: 735  LTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ 794
                   E  L   +    ++KEL+L+ N F  +P SI +   L  + L+DC  L+ +  
Sbjct: 1044 YRS----EEYLSKSLMLFANVKELHLTSNHFTVIPKSIENCQFLWKLILDDCTALKEIKG 1099

Query: 795  LPPNIRQVRVNGCASLVT 812
            +PP +R +    C SL +
Sbjct: 1100 IPPCLRMLSALNCKSLTS 1117


>gi|3860163|gb|AAC72977.1| disease resistance protein RPP1-WsA [Arabidopsis thaliana]
          Length = 1189

 Score =  344 bits (882), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 289/898 (32%), Positives = 435/898 (48%), Gaps = 94/898 (10%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M +  E+   L+     + RMIGI G  G+GKTTIAR +++ +S  F+ S  + N++   
Sbjct: 229  MAAHMERTEQLLRLDLDEARMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCY 288

Query: 61   SK------GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
             +         + LQ Q+LSQ++   D  I      + +   RL+ KKV LV+D+V  + 
Sbjct: 289  PRPCFDEYSAQLQLQNQMLSQMINHKDIMI----SHLGVAQERLRDKKVFLVLDEVDQLG 344

Query: 115  QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
            QL +LA +  WFG GSRIIIT+ D+ +LK HG++ VYK    + DEA Q+F M AF   Q
Sbjct: 345  QLDALAKDTRWFGPGSRIIITTEDQGILKAHGINHVYKVEYPSNDEAFQIFCMNAFGQKQ 404

Query: 175  PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
            P +    L+  +   AG LPL L+VLGS L G S  EW  TL RL      +I  I+Q S
Sbjct: 405  PYEGFCDLAWEVKALAGELPLGLKVLGSALRGMSKPEWERTLPRLRTSLDGKIGGIIQFS 464

Query: 235  FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
            +D L + +K +FL IAC F       V   L         GI VL +K LI+     + M
Sbjct: 465  YDALCDEDKYLFLYIACLFNNESTTKVEEVLANKFLDVGQGIHVLAQKSLISFEGEEIQM 524

Query: 295  HDLLQELGQQIVQRQ-SPEELGKRSRLWKEEEVCHVLTEST-GTELVEGIVLDNYHHENE 352
            H LL++ G++  ++Q       K   L  E ++C VL + T  +    GI LD   +E E
Sbjct: 525  HTLLEQFGRETSRKQFVHHRYTKHQLLVGERDICEVLNDDTIDSRRFIGIHLDLSKNEEE 584

Query: 353  VYLCASAKAFSKMTNLRLLKIC--NLQLPNGLEYL---SNRLRLLGWRGYPLKFLPSNLQ 407
            + +  S KA  ++ + + ++I   N  L   L+ L   S ++R L W  Y    LPS   
Sbjct: 585  LNI--SEKALERIHDFQFVRINDKNHALHERLQDLICHSPKIRSLKWYSYQNICLPSTFN 642

Query: 408  MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
             +  +E+ M +S++ +LW+G K L  LK M LS+S  L  +P+ + A NLE+L L  C+ 
Sbjct: 643  PEFLVELDMSFSKLQKLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELNLRNCSS 702

Query: 468  LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLPTTISGLKC 521
            L E+  S+     L IL+++ C+SL+ LP       LE L      +L+ LP +I+    
Sbjct: 703  LVELPSSIEKLTSLQILDLQGCSSLVELPSFGNATKLEILYLDYCRSLEKLPPSINA--- 759

Query: 522  LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
                +    L  R    IVE                 LP +IE  + L  LNL NC SL 
Sbjct: 760  ----NNLQKLSLRNCSRIVE-----------------LP-AIENATNLWELNLLNCSSLI 797

Query: 582  ILPVTVSNLK--CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLT 638
             LP+++   +   L+ L +SGCS L K P  +  M +L E  L   S + E+PSSI  L 
Sbjct: 798  ELPLSIGTARNLFLKELNISGCSSLVKLPSSIGDMTNLKEFDLSNCSNLVELPSSIGNLQ 857

Query: 639  KLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
             L  L +  C  L  LP + I LKSL TLNL+ C +L++ PE    I+ L    ++GTA+
Sbjct: 858  NLCKLIMRGCSKLEALPIN-INLKSLDTLNLTDCSQLKSFPEISTHIKYLR---LTGTAI 913

Query: 699  PHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKEL 758
                            K V L + S S L   +       +L E     DI     + EL
Sbjct: 914  ----------------KEVPLSIMSWSPLAEFQISYFE--SLKEFPHAFDI-----ITEL 950

Query: 759  YLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALK 818
             LSK+     P  +  +S+L    L +C  L SLPQLP ++  +  + C SL        
Sbjct: 951  QLSKDIQEVTPW-VKRMSRLRYFRLNNCNNLVSLPQLPDSLAYLYADNCKSL-------- 1001

Query: 819  LCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQ 876
                   +  C ++  +  +    F + +E  + + +T      ++PG+++P  F ++
Sbjct: 1002 -----EKLDCCFNNPWISLHFPKCFKLNQEARDLIMHTSTSRIAMLPGTQVPACFNHR 1054


>gi|295083313|gb|ADF78110.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  344 bits (882), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 244/622 (39%), Positives = 356/622 (57%), Gaps = 35/622 (5%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR  ++  L+D  S D V MIGI G+GG+GK+T+A  VY+LI+  F+ S FL ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  LL ++L   + ++ +V  G  ++  RLQRKKVLL++DDV   +QLQ++
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G   WFG GSR+IIT+RD+ LL +HGV   Y+   LN + ALQL   K+FKT +     
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            ++   ++ YA GLPLALEV+GS L G+S++EW+S +++ +  P  +IL+IL++SFD L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNN------TL 292
           E +K +FLDIAC F   D   V + L    G      I VL+EK LI    +       +
Sbjct: 432 EEQKNVFLDIACCFNRYDLTEVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPIV 491

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD-NYHHEN 351
            MHDL++++G++IV+++SP+E  KRSRLW  E++ HVL ++ GT  +E I LD     + 
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKE 551

Query: 352 EVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           E+ +  + KAF KM NL+ L I N +   G +YL N LR+L W  YP   LPS+    K 
Sbjct: 552 EIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPNNLRVLEWWRYPSHCLPSDFHPKKL 611

Query: 412 IEIYMCYSRIG--ELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLY 469
               + +S I   EL    K    L+++     E L ++PD +G PNLE+   E C  L 
Sbjct: 612 AICKLPFSCISSFELDGVWKMFVNLRILNFDRCEGLTQIPDVSGLPNLEEFSFECCFNLI 671

Query: 470 EIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG 529
            +H S+   +KL ILN   C  L + P  I + SLEKLN          L C  +L+   
Sbjct: 672 TVHNSIGFLDKLKILNAFRCKRLRSFP-PIKLTSLEKLN----------LSCCYSLE--- 717

Query: 530 DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS- 588
                 FP+I+  ME++ +L L  ++I  LP S + L+GL  L L       I  V  S 
Sbjct: 718 -----SFPKILGKMENIRQLWLSESSITELPFSFQNLAGLRGLELLFLSPHTIFKVPSSI 772

Query: 589 ----NLKCLRSLKLSGCSKLKK 606
                L  +R+L L G   LK+
Sbjct: 773 VLMPELTVIRALGLKGWQWLKQ 794



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 109/444 (24%), Positives = 172/444 (38%), Gaps = 124/444 (27%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNL 651
            LR L    C  L + P+ V  + +L E   +   ++  V +SI  L KL++LN   CK L
Sbjct: 636  LRILNFDRCEGLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRL 694

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV------------- 698
               P   I L SL+ LNLS C+ LE+ P+ LG++E++ +L +S +++             
Sbjct: 695  RSFPP--IKLTSLEKLNLSCCYSLESFPKILGKMENIRQLWLSESSITELPFSFQNLAGL 752

Query: 699  ---------PHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRK----------------- 732
                     PH T +     I LM +   ++   L G   L++                 
Sbjct: 753  RGLELLFLSPH-TIFKVPSSIVLMPELTVIRALGLKGWQWLKQEEGEEKTGSIVSSKVEM 811

Query: 733  LNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSL 792
            L +  CNL +     D      +KEL LS+N+F   P  I     L  +++ DCK L+ +
Sbjct: 812  LTVAICNLSDEFFSIDFTWFAHMKELCLSENNFTIPPECIKECQFLGKLDVCDCKHLREI 871

Query: 793  PQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEA 852
              +PPN++      C                               KSL  S +R++L  
Sbjct: 872  RGIPPNLKHFFAINC-------------------------------KSLTSSSIRKFLNQ 900

Query: 853  VSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS- 911
              +   +    +PG  IPEWF  Q+ G SI+       + + K     +C +   +++  
Sbjct: 901  ELHEAGNTVFCLPGKRIPEWFDQQSRGPSIS------FWFRNKFPDMVLCLIVAPIRSQF 954

Query: 912  -------RGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLS----RQTC 960
                    GN C                 Y   F     Q G  H +L  L     R + 
Sbjct: 955  FRPEVFINGNEC---------------SPYSCCF-----QKGMHHAYLCDLREIEFRNSP 994

Query: 961  YDIRLPLESNLEPFES--NHVNVS 982
            Y++         PFE+  NHVNV+
Sbjct: 995  YEV---------PFENGWNHVNVT 1009


>gi|357518219|ref|XP_003629398.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355523420|gb|AET03874.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1106

 Score =  344 bits (882), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 240/661 (36%), Positives = 361/661 (54%), Gaps = 37/661 (5%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQ 75
           S +V++IG+ GMGG+GKTT+A  ++  +S ++E S FL+NV E+S + G+  +  +LLS+
Sbjct: 209 SIEVQIIGLWGMGGIGKTTLAAALFQRVSFKYEGSCFLENVTEVSKRHGINFICNKLLSK 268

Query: 76  LLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAG-NREWFGSGSRIII 134
           LL+  D  I +      M+  RL+R K  +V+DDV  ++ LQ+L G    W G GS +I+
Sbjct: 269 LLR-EDLDIESAKVIPSMIMRRLKRMKSFIVLDDVHTLELLQNLIGVGNGWLGDGSIVIV 327

Query: 135 TSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLP 194
           T+RD+H+L + G+D++++   +N   +LQLF+  AF    P +  V+LS R+I YA G P
Sbjct: 328 TTRDKHVLVSGGIDKIHQVKEMNSRNSLQLFSFNAFDKVLPKEGYVELSERVIDYAKGNP 387

Query: 195 LALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFK 254
           LAL+VLGSFL  +S  EW   L +L+  P +EI  I++ S++ L + EK IFLDIACFFK
Sbjct: 388 LALKVLGSFLCSKSEIEWNCALAKLKEIPNAEIDKIMRWSYNELDDKEKNIFLDIACFFK 447

Query: 255 GNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELGQQIVQRQSPEE 313
           G++RD +T  L  CGF   IGIR L++K LI V   N + MHDL+QE+G+Q+V+ +S + 
Sbjct: 448 GHERDRMTTILNQCGFFADIGIRTLLDKALIRVDFENCIQMHDLIQEMGKQVVREESLKN 507

Query: 314 LGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLK- 372
             + SRLW  +EV  VL  +  T++VE I LD        ++  S K F KM NLRLL  
Sbjct: 508 PEQSSRLWDPKEVYDVLKNNRETKIVEAIFLDATESR---HINLSPKTFEKMPNLRLLAF 564

Query: 373 -----ICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKG 427
                I ++ LP+GL+ L   LR   W GYP K LP     +  +E  +  S +  LW G
Sbjct: 565 RDHKGIKSVSLPSGLDSLPKNLRYFLWDGYPSKSLPPTFCPEMLVEFSLQDSHVENLWNG 624

Query: 428 IKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMK 487
             +L  L+++ LS+S+ LI  P+ +G+ NL+ + L GC  L E+  S+    KL  L + 
Sbjct: 625 ELNLPNLEILDLSNSKKLIECPNVSGSLNLKYVRLNGCLSLPEVDSSIFFLQKLESLIID 684

Query: 488 DCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLS 547
            C SL ++       +L +LN          L+  S    S D  F   PE   +    S
Sbjct: 685 GCISLKSISSNTCSPALRELN----AMNCINLQEFSVTFSSVDNLFLSLPEFGANKFPSS 740

Query: 548 ELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL---------------EILPVTVSNLKC 592
            LH +       P+S  L+   +  N  NC  L               +ILP        
Sbjct: 741 ILHTKNLEYFLSPISDSLVD--LPENFANCIWLANSLKGERDSSIILHKILPSPA--FLS 796

Query: 593 LRSLKLSG--CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKN 650
           ++ L L G     L + P+ +  +  L  L L   +I+ +P +I  L +LE L++ +CK 
Sbjct: 797 VKHLILFGNDVPFLSEIPDNISLLSSLKSLRLFNIAIRSLPETIMYLPQLESLSVFNCKM 856

Query: 651 L 651
           L
Sbjct: 857 L 857


>gi|295083309|gb|ADF78108.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  344 bits (882), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 244/622 (39%), Positives = 356/622 (57%), Gaps = 35/622 (5%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR  ++  L+D  S D V MIGI G+GG+GK+T+A  VY+LI+  F+ S FL ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  LL ++L   + ++ +V  G  ++  RLQRKKVLL++DDV   +QLQ++
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G   WFG GSR+IIT+RD+ LL +HGV   Y+   LN + ALQL   K+FKT +     
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            ++   ++ YA GLPLALEV+GS L G+S++EW+S +++ +  P  +IL+IL++SFD L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNN------TL 292
           E +K +FLDIAC F   D   V + L    G      I VL+EK LI    +       +
Sbjct: 432 EEQKNVFLDIACCFNRYDLTEVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPIV 491

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD-NYHHEN 351
            MHDL++++G++IV+++SP+E  KRSRLW  E++ HVL ++ GT  +E I LD     + 
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKE 551

Query: 352 EVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           E+ +  + KAF KM NL+ L I N +   G +YL N LR+L W  YP   LPS+    K 
Sbjct: 552 EIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPNNLRVLEWWRYPSHCLPSDFHPKKL 611

Query: 412 IEIYMCYSRIG--ELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLY 469
               + +S I   EL    K    L+++     E L ++PD +G PNLE+   E C  L 
Sbjct: 612 AICKLPFSCISSFELDGVWKMFVNLRILNFDRCEGLTQIPDVSGLPNLEEFSFECCFNLI 671

Query: 470 EIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG 529
            +H S+   +KL ILN   C  L + P  I + SLEKLN          L C  +L+   
Sbjct: 672 TVHNSIGFLDKLKILNAFRCKRLRSFP-PIKLTSLEKLN----------LSCCYSLE--- 717

Query: 530 DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS- 588
                 FP+I+  ME++ +L L  ++I  LP S + L+GL  L L       I  V  S 
Sbjct: 718 -----SFPKILGKMENIRQLWLSESSITELPFSFQNLAGLRGLELLFLSPHTIFKVPSSI 772

Query: 589 ----NLKCLRSLKLSGCSKLKK 606
                L  +R+L L G   LK+
Sbjct: 773 VLMPELTVIRALGLKGWQWLKQ 794



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 107/458 (23%), Positives = 185/458 (40%), Gaps = 96/458 (20%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNL 651
            LR L    C  L + P+ V  + +L E   +   ++  V +SI  L KL++LN   CK L
Sbjct: 636  LRILNFDRCEGLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRL 694

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV------------- 698
               P   I L SL+ LNLS C+ LE+ P+ LG++E++ +L +S +++             
Sbjct: 695  RSFPP--IKLTSLEKLNLSCCYSLESFPKILGKMENIRQLWLSESSITELPFSFQNLAGL 752

Query: 699  ---------PHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRK----------------- 732
                     PH T +     I LM +   ++   L G   L++                 
Sbjct: 753  RGLELLFLSPH-TIFKVPSSIVLMPELTVIRALGLKGWQWLKQEEGEEKTGSIVSSKVEM 811

Query: 733  LNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSL 792
            L +  CNL +     D      +KEL LS+N+F  L   I     L  +++ DCK L+ +
Sbjct: 812  LTVAICNLSDEFFSIDFTWFAHMKELCLSENNFTILRECIKECQFLRKLDVCDCKHLREI 871

Query: 793  PQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEA 852
              +PPN++      C                               KSL  S +R++L  
Sbjct: 872  RGIPPNLKHFFAINC-------------------------------KSLTSSSIRKFLNQ 900

Query: 853  VSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS- 911
              +   +    +PG  IPEWF  Q+ G SI+       + + K     +C +   +++  
Sbjct: 901  ELHEAGNTVFCLPGKRIPEWFDQQSRGPSIS------FWFRNKFPDMVLCLIVAPIRSQF 954

Query: 912  -------RGNNCFGSYPTHQLNCHIGH--GIYGIGFRDKFGQAGSDHLW-LLYLSRQTCY 961
                    GN C       Q+  H  +   +  I FR+   +   ++ W  + ++   C 
Sbjct: 955  FRPEVFINGNECSPYSCCFQIGMHHAYLCDLREIKFRNSPYEVPFENGWNHVNVTCPRCI 1014

Query: 962  DIRL-PLESNLEPFESNHV--NVSF-EPWLGQGLEVKM 995
            D  + P++  +  F+  H   +V F +P++ +  +  M
Sbjct: 1015 DTYIHPVKMGIHIFKQEHAMEDVRFTDPYIARENQTMM 1052


>gi|215261576|gb|ACJ64856.1| disease resistance protein RPP1-like protein R2 [Arabidopsis
            thaliana]
          Length = 1162

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 277/814 (34%), Positives = 408/814 (50%), Gaps = 73/814 (8%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-- 58
            M +  + L  L+     +VRMIGI G  G+GKTTIAR + + +S  F+ S  + N++   
Sbjct: 271  MRAHMDMLEQLLRHDLDEVRMIGIWGPPGIGKTTIARFLLNQVSDRFQLSAIMVNIKGCY 330

Query: 59   ----ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
                +  +   + LQ Q+LSQ++   D  I      + +   RL+ KKV LV+D+V  + 
Sbjct: 331  PRLCLDERSAQLQLQNQMLSQMINHKDIMI----SHLGVAQERLRDKKVFLVLDEVDQLG 386

Query: 115  QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
            QL +LA    WFG GSRIIIT+ D  +LK HG++ VYK    + DEA Q+F M AF   Q
Sbjct: 387  QLDALAKETRWFGPGSRIIITTEDLGVLKAHGINHVYKVGYPSNDEAFQIFCMNAFGQKQ 446

Query: 175  PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
            P +   +++  ++  AG LPL L+VLGS L G+S  EW  TL RL+      I  I+Q S
Sbjct: 447  PHEGFDEIAREVMALAGELPLGLKVLGSALRGKSKPEWERTLPRLKTSLDGNIGSIIQFS 506

Query: 235  FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
            +D L + +K +FL IAC F       V   L G       G+ +L +K LI+     + M
Sbjct: 507  YDALCDEDKYLFLYIACLFNDESTTKVKELL-GKFLDARQGLHILAQKSLISFDGERIHM 565

Query: 295  HDLLQELGQQIVQRQSPEE-LGKRSRLWKEEEVCHVLT-ESTGTELVEGIVLDNYHHENE 352
            H LL++ G++  ++Q       K   L  E ++C VL  ++T +    GI LD Y +E E
Sbjct: 566  HTLLEQFGRETSRKQFVYHGYTKHQLLVGERDICEVLNDDTTDSRRFIGINLDLYKNEEE 625

Query: 353  VYLCASAKAFSKMTNLRLLKICN--------LQLP-NGLEYLSNRLRLLGWRGYPLKFLP 403
            + +  S KA  ++ + + +KI +        +QL    L Y S R+R L W  Y    LP
Sbjct: 626  LNI--SEKALERIHDFQFVKINDVFTHQPERVQLALEDLIYQSPRIRSLKWFPYQNICLP 683

Query: 404  SNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
            S    +  +E+ M  S + +LW+G K L  LK M LS S  L  +P+ + A NLE+L L 
Sbjct: 684  STFNPEFLVELDMSDSNLRKLWEGTKQLRNLKWMDLSDSSYLKELPNLSTATNLEELKLR 743

Query: 464  GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLS 523
             C+ L E+  S+     L IL++  C+SL+ LP       L+KL+L          KC S
Sbjct: 744  NCSSLVELPSSIEKLTSLQILDLHSCSSLVELPSFGNTTKLKKLDLG---------KCSS 794

Query: 524  TLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEI 582
             + +         P I  +  +L EL L   + +  LP +IE  + L  L L+NC SL  
Sbjct: 795  LVKLP--------PSI--NANNLQELSLRNCSRVVKLP-AIENATKLRELKLRNCSSLIE 843

Query: 583  LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLE 641
            LP+++     L+ L +SGCS L K P  +  M +L    LD  +S+  +PSSI  L KL 
Sbjct: 844  LPLSIGTATNLKKLNISGCSSLVKLPSSIGDMTNLEVFDLDNCSSLVTLPSSIGNLQKLS 903

Query: 642  LLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHS 701
             L +S+C  L  LP++ I LKSL TL+L+ C +L++ PE    I    EL + GTA+   
Sbjct: 904  ELLMSECSKLEALPTN-INLKSLYTLDLTDCTQLKSFPEISTHI---SELRLKGTAI--- 956

Query: 702  TSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLS 761
                         K V L + S S L                AL  DI     + +L L 
Sbjct: 957  -------------KEVPLSITSWSRLAVYEMSYFESLKEFPHAL--DI-----ITDLLLV 996

Query: 762  KNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQL 795
                  +P  +  +S+L ++ L +C  L SLPQL
Sbjct: 997  SEDIQEVPPWVKRMSRLRDLRLNNCNNLVSLPQL 1030



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 148/304 (48%), Gaps = 51/304 (16%)

Query: 508 NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELL 566
           NL+ L      L+ L  +D+S     +E P +     +L EL L   +++  LP SIE L
Sbjct: 700 NLRKLWEGTKQLRNLKWMDLSDSSYLKELPNL-STATNLEELKLRNCSSLVELPSSIEKL 758

Query: 567 SGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS 626
           + L +L+L +C SL  LP +  N   L+ L L  CS L K P  + +  +L EL L   S
Sbjct: 759 TSLQILDLHSCSSLVELP-SFGNTTKLKKLDLGKCSSLVKLPPSINA-NNLQELSLRNCS 816

Query: 627 -IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI 685
            + ++P+ IE  TKL  L L +C +L+ LP SI    +LK LN+SGC  L  +P ++G  
Sbjct: 817 RVVKLPA-IENATKLRELKLRNCSSLIELPLSIGTATNLKKLNISGCSSLVKLPSSIGD- 874

Query: 686 ESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGAL 745
                                                    + +L   +L +C+ +   L
Sbjct: 875 -----------------------------------------MTNLEVFDLDNCSSL-VTL 892

Query: 746 PSDIGNLCSLKELYLSKNS-FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRV 804
           PS IGNL  L EL +S+ S   +LPT+I +L  L  ++L DC +L+S P++  +I ++R+
Sbjct: 893 PSSIGNLQKLSELLMSECSKLEALPTNI-NLKSLYTLDLTDCTQLKSFPEISTHISELRL 951

Query: 805 NGCA 808
            G A
Sbjct: 952 KGTA 955


>gi|357499359|ref|XP_003619968.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494983|gb|AES76186.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1401

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 237/686 (34%), Positives = 376/686 (54%), Gaps = 66/686 (9%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +  R ++L+ L+D  S++ V M+GI G GGLGK+T+A+ +Y+ ++ +FE   FL  VRE 
Sbjct: 182 LQYRVQQLKLLLDKESNEGVHMVGIYGTGGLGKSTLAKAIYNYVADQFECVCFLHKVREN 241

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+   L  LQ +LL + +KL +  + +V +GI ++  RL RKK+LL++DDV  ++QL++L
Sbjct: 242 STHNNLKHLQEELLLKTIKL-NIKLGDVSEGIPLIKERLHRKKILLILDDVDKMEQLEAL 300

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG GSR+IIT+RD+HLL  H VD  Y+  G+   EA +L    AFK   PL   
Sbjct: 301 AGGLDWFGRGSRVIITTRDKHLLTCHRVDRTYEVEGIYGKEAFELLRWLAFKDKVPLG-Y 359

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            ++  R + YA GLPL +E++GS L G+S++ W+STL+  E  P ++I +IL++S+D L+
Sbjct: 360 EEILNRAVSYASGLPLVIEIVGSNLFGKSIETWKSTLDGYEKIPNTKIQEILKVSYDALE 419

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVI-GIRVLIEKCLITVHNN-------- 290
           E E+ +FLDIAC FKG     V + L     H +   + VL+EK L+ ++          
Sbjct: 420 EEEQSVFLDIACCFKGCKWTEVEDILHAHYGHCIKHHVGVLVEKSLLKINTQYRSARNHV 479

Query: 291 TLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHE 350
            + +HDL++++G++IV+++S +E G+RSRLW  +++ HVL ++TGT  +E I L+     
Sbjct: 480 DVTLHDLVEDMGKEIVRQESSKEPGERSRLWCHDDIVHVLQKNTGTSNIEMIYLNC--PA 537

Query: 351 NEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK 410
            E  +  + K+F KMT L+ L I N     G +YL N LR+  W+G              
Sbjct: 538 MEPVIDCNGKSFKKMTKLKTLIIENGHFSKGPKYLPNSLRVFKWKG-------------- 583

Query: 411 TIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYE 470
                 C S         K  D +KV+   + E L  +P+ +G  NLEK  +E    L  
Sbjct: 584 ------CTSESLSSSIFSKKFDFMKVLTFDNCEYLTHVPNVSGLLNLEKFSVEKSNNLIT 637

Query: 471 IHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGD 530
           IH S+   NKL ILN K C  L + P                P  +  LK     ++S  
Sbjct: 638 IHDSIGKLNKLEILNAKKCIKLESFP----------------PLQLPSLK---EFELSYC 678

Query: 531 LKFREFPEIVEHMEHLSELHLE-GTAIRGLPLSIELLSGLVLLNLKNCRSL-------EI 582
              ++FPE++  M +L E+ L   T+I GLP S E LS L  + +     L       ++
Sbjct: 679 RSLKKFPELLCKMTNLKEIALHNNTSIGGLPFSFENLSELRHVTIYRSGMLRFPKHIDKM 738

Query: 583 LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL 642
            P+  SN++ L SL  S  S  +  P +++   ++  L L   + K +P  ++    L +
Sbjct: 739 YPIVFSNVESL-SLYESNLS-FECLPMLLKWFVNVKHLDLSKNNFKILPECLKECHLLRI 796

Query: 643 LNLSDCKNL--VR-LPSSIIALKSLK 665
           L L+ CK+L  +R +P ++  L ++K
Sbjct: 797 LELNHCKSLEEIRGIPPNLKDLSAIK 822



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 14/226 (6%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLTKLELLNLSDCKNL 651
           ++ L    C  L   P  V  + +L +  ++ ++ +  +  SI  L KLE+LN   C  L
Sbjct: 601 MKVLTFDNCEYLTHVPN-VSGLLNLEKFSVEKSNNLITIHDSIGKLNKLEILNAKKCIKL 659

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL----DISGTAVPHSTSWYSY 707
              P   + L SLK   LS C  L+  PE L ++ +L+E+    + S   +P S    S 
Sbjct: 660 ESFPP--LQLPSLKEFELSYCRSLKKFPELLCKMTNLKEIALHNNTSIGGLPFSFENLSE 717

Query: 708 IPINLMRKSVALKLPSLSG------LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLS 761
           +    + +S  L+ P            ++  L+L + NL    LP  +    ++K L LS
Sbjct: 718 LRHVTIYRSGMLRFPKHIDKMYPIVFSNVESLSLYESNLSFECLPMLLKWFVNVKHLDLS 777

Query: 762 KNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGC 807
           KN+F  LP  +     L  +EL  CK L+ +  +PPN++ +    C
Sbjct: 778 KNNFKILPECLKECHLLRILELNHCKSLEEIRGIPPNLKDLSAIKC 823


>gi|15235924|ref|NP_193422.1| protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 [Arabidopsis thaliana]
 gi|75097884|sp|O23530.3|SNC1_ARATH RecName: Full=Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1;
            Short=AtSNC1; AltName: Full=Disease resistance RPP5-like
            protein
 gi|5302803|emb|CAB46044.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268440|emb|CAB80960.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|332658420|gb|AEE83820.1| protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 [Arabidopsis thaliana]
          Length = 1301

 Score =  343 bits (881), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 276/873 (31%), Positives = 428/873 (49%), Gaps = 143/873 (16%)

Query: 21   MIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS--KGGLVSLQRQLLSQLLK 78
            M+GI G  G+GK+TI R +Y  +S +F    F+       S   G  +  +++LLS++L 
Sbjct: 207  MVGIWGQSGIGKSTIGRALYSKLSIQFHHRAFITYKSTSGSDVSGMKLRWEKELLSEILG 266

Query: 79   LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
              D  I    +   ++  RL+++KVL+++DDV  ++ L++L G  EWFGSGSRII+ ++D
Sbjct: 267  QKDIKI----EHFGVVEQRLKQQKVLILLDDVDSLEFLKTLVGKAEWFGSGSRIIVITQD 322

Query: 139  EHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALE 198
              LLK H +D +Y+    +   AL +    AF    P  +  +L+  + + AG LPL L 
Sbjct: 323  RQLLKAHEIDLIYEVEFPSEHLALTMLCRSAFGKDSPPDDFKELAFEVAKLAGNLPLGLS 382

Query: 199  VLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDR 258
            VLGS L GR+ + W   + RL      +I+  L++S+D L + ++ +FL IAC F G + 
Sbjct: 383  VLGSSLKGRTKEWWMEMMPRLRNGLNGDIMKTLRVSYDRLHQKDQDMFLYIACLFNGFEV 442

Query: 259  DYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPEELGKR 317
             YV + L+       +G  +L EK LI +  +  + MH+LL++LG++I + +S    GKR
Sbjct: 443  SYVKDLLKDN-----VGFTMLTEKSLIRITPDGYIEMHNLLEKLGREIDRAKSKGNPGKR 497

Query: 318  SRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNL- 376
              L   E++  V+TE TGTE + GI L    + +   L    ++F  M NL+ L+I    
Sbjct: 498  RFLTNFEDIHEVVTEKTGTETLLGIRLPFEEYFSTRPLLIDKESFKGMRNLQYLEIGYYG 557

Query: 377  QLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKV 436
             LP  L YL  +LRLL W   PLK LPS  + +  + + M YS++ +LW+G   L  LK 
Sbjct: 558  DLPQSLVYLPLKLRLLDWDDCPLKSLPSTFKAEYLVNLIMKYSKLEKLWEGTLPLGSLKE 617

Query: 437  MILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLP 496
            M L +S NL  +PD + A NLE+L L GC  L  +  S+    KLI L+M DC  L + P
Sbjct: 618  MNLRYSNNLKEIPDLSLAINLEELDLVGCKSLVTLPSSIQNATKLIYLDMSDCKKLESFP 677

Query: 497  GKILMKSLEKLNL------------------------------------KSLPTTISGLK 520
              + ++SLE LNL                                    K+LP  +  L 
Sbjct: 678  TDLNLESLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVVEDCFWNKNLPAGLDYLD 737

Query: 521  CLST-------------LDVSGDLKFREFPEIVEHMEHLSELHL-EGTAIRGLPLSIELL 566
            CL+              L+V G  K  +  E ++ +  L  + L E   +  +P  +   
Sbjct: 738  CLTRCMPCEFRPEQLAFLNVRG-YKHEKLWEGIQSLGSLEGMDLSESENLTEIP-DLSKA 795

Query: 567  SGLVLLNLKNCRSLEILPVTVS-----------------------NLKCLRSLKLSGCSK 603
            + L  L L NC+SL  LP T+                        NL  L +L LSGCS 
Sbjct: 796  TKLESLILNNCKSLVTLPSTIGNLHRLVRLEMKECTGLEVLPTDVNLSSLETLDLSGCSS 855

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
            L+ FP I     ++  L+L+ T+I+E+PS+I  L +L  L +  C  L  LP+  + L S
Sbjct: 856  LRSFPLIS---TNIVWLYLENTAIEEIPSTIGNLHRLVRLEMKKCTGLEVLPTD-VNLSS 911

Query: 664  LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPS 723
            L+TL+LSGC  L + P      ES++ L +  TA+                     ++P 
Sbjct: 912  LETLDLSGCSSLRSFPLI---SESIKWLYLENTAIE--------------------EIPD 948

Query: 724  LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIEL 783
            LS   +L+ L L +C                         S V+LPT+I +L KL++ E+
Sbjct: 949  LSKATNLKNLKLNNC------------------------KSLVTLPTTIGNLQKLVSFEM 984

Query: 784  EDCKRLQSLPQLPPNIRQVRV---NGCASLVTL 813
            ++C  L+ LP +  N+  + +   +GC+SL T 
Sbjct: 985  KECTGLEVLP-IDVNLSSLMILDLSGCSSLRTF 1016



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 143/442 (32%), Positives = 213/442 (48%), Gaps = 87/442 (19%)

Query: 375  NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKL 434
            N  LP GL+YL    R +     P +F P  L       + +   +  +LW+GI+ L  L
Sbjct: 726  NKNLPAGLDYLDCLTRCM-----PCEFRPEQLAF-----LNVRGYKHEKLWEGIQSLGSL 775

Query: 435  KVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLIT 494
            + M LS SENL  +PD + A  LE LIL  C  L  +  ++   ++L+ L MK+CT L  
Sbjct: 776  EGMDLSESENLTEIPDLSKATKLESLILNNCKSLVTLPSTIGNLHRLVRLEMKECTGLEV 835

Query: 495  LPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT 554
            LP  + + SLE                  TLD+SG    R FP I  ++  L   +LE T
Sbjct: 836  LPTDVNLSSLE------------------TLDLSGCSSLRSFPLISTNIVWL---YLENT 874

Query: 555  AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
            AI  +P +I  L  LV L +K C  LE+LP  V NL  L +L LSGCS L+ FP I  S+
Sbjct: 875  AIEEIPSTIGNLHRLVRLEMKKCTGLEVLPTDV-NLSSLETLDLSGCSSLRSFPLISESI 933

Query: 615  KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
            K    L+L+ T+I+E+P  +   T L+ L L++CK+LV LP++I  L+ L +  +  C  
Sbjct: 934  K---WLYLENTAIEEIPD-LSKATNLKNLKLNNCKSLVTLPTTIGNLQKLVSFEMKECTG 989

Query: 675  LENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLN 734
            LE +P                            I +NL     +L +  LSG  SLR   
Sbjct: 990  LEVLP----------------------------IDVNL----SSLMILDLSGCSSLRTFP 1017

Query: 735  LTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ 794
            L   N++                LYL   +   +P++I +L +L+ +E+++C  L+ LP 
Sbjct: 1018 LISTNIVW---------------LYLENTAIEEIPSTIGNLHRLVKLEMKECTGLEVLPT 1062

Query: 795  LPPNIRQVRV---NGCASLVTL 813
               N+  + +   +GC+SL T 
Sbjct: 1063 -DVNLSSLMILDLSGCSSLRTF 1083



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 185/397 (46%), Gaps = 52/397 (13%)

Query: 311  PEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKM-TNLR 369
            P  +G   RL + E     + E TG E++   V  +     ++  C+S ++F  + TN+ 
Sbjct: 813  PSTIGNLHRLVRLE-----MKECTGLEVLPTDVNLSSLETLDLSGCSSLRSFPLISTNIV 867

Query: 370  LLKICNL---QLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMD--KTIEIYMCYS-RIGE 423
             L + N    ++P+ +  L   +RL   +   L+ LP+++ +   +T+++  C S R   
Sbjct: 868  WLYLENTAIEEIPSTIGNLHRLVRLEMKKCTGLEVLPTDVNLSSLETLDLSGCSSLRSFP 927

Query: 424  LWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLII 483
            L       + +K + L ++  +  +PD + A NL+ L L  C  L  +  ++    KL+ 
Sbjct: 928  LIS-----ESIKWLYLENTA-IEEIPDLSKATNLKNLKLNNCKSLVTLPTTIGNLQKLVS 981

Query: 484  LNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHM 543
              MK+CT L  LP  +                   L  L  LD+SG    R FP I  ++
Sbjct: 982  FEMKECTGLEVLPIDV------------------NLSSLMILDLSGCSSLRTFPLISTNI 1023

Query: 544  EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
                 L+LE TAI  +P +I  L  LV L +K C  LE+LP  V NL  L  L LSGCS 
Sbjct: 1024 VW---LYLENTAIEEIPSTIGNLHRLVKLEMKECTGLEVLPTDV-NLSSLMILDLSGCSS 1079

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
            L+ FP I   ++    L+L  T+I+EVP  IE  T+L +L +  C+ L  +  +I  L  
Sbjct: 1080 LRTFPLISTRIEC---LYLQNTAIEEVPCCIEDFTRLTVLMMYCCQRLKTISPNIFRLTR 1136

Query: 664  LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
            L+  + + C          G I++L +  +  T   H
Sbjct: 1137 LELADFTDC---------RGVIKALSDATVVATMEDH 1164


>gi|147815446|emb|CAN68384.1| hypothetical protein VITISV_018351 [Vitis vinifera]
          Length = 940

 Score =  343 bits (880), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 207/493 (41%), Positives = 292/493 (59%), Gaps = 33/493 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D+R ++++ L+   S DVRM+GI GMGG+GKTT+ R VY  IS++FE   FL+NV E  
Sbjct: 194 IDARIQEMKTLLCLASDDVRMVGIWGMGGIGKTTLVRAVYSRISYQFEGCSFLENVAEDL 253

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            K GL+ LQ +LLS LL+  + ++      +  + +RL  KKVL+V+D+V D   L+ L 
Sbjct: 254 KKKGLIGLQEKLLSHLLEEENLNM----KELTSIKARLHSKKVLIVLDNVNDPTILECLI 309

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           GN++WFG GS IIIT+RD+ LL +H ++ +YK H  N DEAL+     + K     ++ +
Sbjct: 310 GNQDWFGRGSTIIITTRDKRLLLSHKIN-LYKVHKFNDDEALEFLARYSLKHELLREDFL 368

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS  +I YA GLPLAL VLGSFL   S +EWR  L++L+  P  +I ++L+IS+DGL  
Sbjct: 369 ELSRVVICYAQGLPLALTVLGSFLFSMSKEEWRDQLDKLKSIPNMKIHEVLKISYDGLDF 428

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            EK IFLDIACF KG D++YV   L+ CGF  V GIR L +K LI+  +N + MHDL+QE
Sbjct: 429 EEKNIFLDIACFLKGEDKNYVKEILDYCGFFSVSGIRALADKSLISFFHNRIMMHDLIQE 488

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G +IV RQ     G+RSRLW  +++   L ++T    +EGI LD   H  E+ +  S +
Sbjct: 489 MGMEIV-RQESHNPGQRSRLWLHKDINDALKKNTENGKIEGIFLD-LSHSQEI-IDFSTQ 545

Query: 361 AFSKMTNLRLLKI------------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFL 402
           AF +M  LRLLK+                  C +     L +  + LR L   GY LK L
Sbjct: 546 AFPRMYKLRLLKVYESNKISRNFGDTLNKENCKVHFSPKLRFCYDELRYLYLYGYSLKSL 605

Query: 403 PSNLQMDKTIEIYMCYSRIGELWKGIK-H-----LDKLKVMILSHSENLIRMP-DFTGAP 455
            ++      + + M YS I  LWKGIK H     L+KL  + L + E L  +P       
Sbjct: 606 DNDFXAKNLVHLSMHYSHINRLWKGIKVHPSLGVLNKLNFLSLKNCEKLKSLPSSMCDLK 665

Query: 456 NLEKLILEGCTRL 468
           +LE  IL GC+RL
Sbjct: 666 SLETFILSGCSRL 678



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/67 (47%), Positives = 44/67 (65%)

Query: 629 EVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
           +V  S+ +L KL  L+L +C+ L  LPSS+  LKSL+T  LSGC +LE+ PE  G +E L
Sbjct: 632 KVHPSLGVLNKLNFLSLKNCEKLKSLPSSMCDLKSLETFILSGCSRLEDFPENFGNLEML 691

Query: 689 EELDISG 695
           +EL   G
Sbjct: 692 KELHADG 698



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 121/267 (45%), Gaps = 60/267 (22%)

Query: 766  VSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR---VNGCASLVTLLDALKLCKS 822
            + +  S+  L+KL  + L++C++L+SLP    +++ +    ++GC+ L            
Sbjct: 631  IKVHPSLGVLNKLNFLSLKNCEKLKSLPSSMCDLKSLETFILSGCSRLE----------- 679

Query: 823  DSTMIACLDSLKLLGNKSLAFSMLRE-YLEAV-SNTRQHL-SVVVPGSEIPEWFMYQNEG 879
                    D  +  GN      ML+E + + +  N+  HL  V+V GS IP+W  YQ+ G
Sbjct: 680  --------DFPENFGN----LEMLKELHADGIPRNSGAHLIYVMVYGSRIPDWIRYQSSG 727

Query: 880  SSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCF--GSYP-THQLNCHIGHGIYGI 936
              +    P N YN   L+G A+  V +V      +N     SY   +  + +I + I  I
Sbjct: 728  CEVEADLPPNWYN-SNLLGLALSFVTYVF----ASNVIIPVSYTLRYSTSSYIANRI-SI 781

Query: 937  GFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESN------LEPFESNHVNVSF-EPWLGQ 989
             F DK G  G DH+WLLY        I+LPL SN      +   E  H++VSF    +G 
Sbjct: 782  RF-DKEG-VGLDHVWLLY--------IKLPLFSNWHNGTPINWHEVTHISVSFGTQVMGW 831

Query: 990  GLEVKMCGLHPVYMDEVEELDQTTNQP 1016
               +K  G   VY +     DQ  N P
Sbjct: 832  YPPIKRSGFDLVYSN-----DQDVNPP 853



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 6/103 (5%)

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
           L +LD   D   +    +  H  H++ L      I+  P S+ +L+ L  L+LKNC  L+
Sbjct: 602 LKSLD--NDFXAKNLVHLSMHYSHINRL---WKGIKVHP-SLGVLNKLNFLSLKNCEKLK 655

Query: 582 ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG 624
            LP ++ +LK L +  LSGCS+L+ FPE   +++ L EL  DG
Sbjct: 656 SLPSSMCDLKSLETFILSGCSRLEDFPENFGNLEMLKELHADG 698


>gi|357499227|ref|XP_003619902.1| Disease resistance protein [Medicago truncatula]
 gi|355494917|gb|AES76120.1| Disease resistance protein [Medicago truncatula]
          Length = 1660

 Score =  343 bits (880), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 234/680 (34%), Positives = 359/680 (52%), Gaps = 70/680 (10%)

Query: 1    MDSRCEKLRFLMDSGS-SDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            + SR E+++ L+D GS ++VRM+GI G GG+GK+T+A+ V++ I+ +FE   FL NVRE 
Sbjct: 555  LQSRIEQVKLLLDMGSENEVRMVGIFGTGGMGKSTLAKAVFNSIADQFEGVCFLHNVREN 614

Query: 60   SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            S+   L  LQ++LLS+++K  D  I +V +GI ++  RL RKK+LL++DDV  ++QL +L
Sbjct: 615  STLKNLKHLQKKLLSKIVKF-DGQIEDVSEGIPIIKERLSRKKILLILDDVDKLEQLDAL 673

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            AG  +WFG GSR+IIT+RD+ LL  H     +   GLN  EAL+L +  AFK  +     
Sbjct: 674  AGGLDWFGLGSRVIITTRDKRLLAYHVNTSTHAVEGLNETEALELLSRNAFKNDKVPSSY 733

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
              +  R++ YA GLPLA+  +G+ L GR V++W   L+  E  P  +I  ILQ+S+D L+
Sbjct: 734  EDILNRVVTYASGLPLAIVTIGANLIGRKVEDWERILDEYENIPDKDIQRILQVSYDALK 793

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPV-IGIRVLIEKCLIT--VHNNTLWMHD 296
            E ++ +FLDIAC FKG     V   L     HP+   + VL EK LI    ++  + +HD
Sbjct: 794  EKDQSVFLDIACCFKGCKWTKVKKILHAHYGHPIEHHVGVLAEKSLIGHWEYDTHVTLHD 853

Query: 297  LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
            L++++G+++V+++SP++ G+RSRLW  +++ +VL ++TGT  +E I L       E    
Sbjct: 854  LIEDMGKEVVRQESPKKPGERSRLWFRDDIVNVLRDNTGTGNIEMIYLKYAFTARETEW- 912

Query: 357  ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
                A  KMTNL+ L I +     G  YL + LR   W   PLK L              
Sbjct: 913  -DGMACEKMTNLKTLIIKDGNFSRGPGYLPSSLRYWKWISSPLKSLS------------- 958

Query: 417  CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
            C S         K  + +KVM L  S+ L  +PD +G PNLEK    GC  L +IH S+ 
Sbjct: 959  CISS--------KEFNYMKVMTLDGSQYLTHIPDVSGLPNLEKCSFRGCDSLIKIHSSIG 1010

Query: 477  LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
              NKL IL+   C+ L   P                P  +  LK     D    +  + F
Sbjct: 1011 HLNKLEILDTFGCSELEHFP----------------PLQLPSLKKFEITDC---VSLKNF 1051

Query: 537  PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
            PE++  M ++ ++ +  T+I  LP S            +N   L+ L ++  NL+     
Sbjct: 1052 PELLCEMTNIKDIEIYDTSIEELPYS-----------FQNFSKLQRLTISGGNLQ----- 1095

Query: 597  KLSGCSKLKKFPEIVRS--MKDLSELFLDGTSIKE--VPSSIELLTKLELLNLSDCKNLV 652
               G  +  K+ + + S  + ++  L L G S+ +  +P  ++    +  L+LS   N  
Sbjct: 1096 ---GKLRFPKYNDKMNSIVISNVEHLNLAGNSLSDECLPILLKWFVNVTFLDLSCNYNFT 1152

Query: 653  RLPSSIIALKSLKTLNLSGC 672
             LP  +     LK LNL  C
Sbjct: 1153 ILPECLGECHRLKHLNLKFC 1172



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 140/317 (44%), Gaps = 54/317 (17%)

Query: 585  VTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELL 643
            ++      ++ + L G   L   P+ V  + +L +    G  S+ ++ SSI  L KLE+L
Sbjct: 960  ISSKEFNYMKVMTLDGSQYLTHIPD-VSGLPNLEKCSFRGCDSLIKIHSSIGHLNKLEIL 1018

Query: 644  NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PH 700
            +   C  L   P   + L SLK   ++ C  L+N PE L ++ ++++++I  T++   P+
Sbjct: 1019 DTFGCSELEHFPP--LQLPSLKKFEITDCVSLKNFPELLCEMTNIKDIEIYDTSIEELPY 1076

Query: 701  STSWYSYIPINLMRKSVA-------LKLPSLSG------LCSLRKLNLTDCNLMEGALPS 747
            S   +S     L R +++       L+ P  +       + ++  LNL   +L +  LP 
Sbjct: 1077 SFQNFS----KLQRLTISGGNLQGKLRFPKYNDKMNSIVISNVEHLNLAGNSLSDECLPI 1132

Query: 748  DIGNLCSLKELYLSKN-SFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNG 806
             +    ++  L LS N +F  LP  +    +L ++ L+ CK L  +  +PPN+  +    
Sbjct: 1133 LLKWFVNVTFLDLSCNYNFTILPECLGECHRLKHLNLKFCKALVEIRGIPPNLEMLFAVM 1192

Query: 807  CASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPG 866
            C SL +                   S+++L ++ L  S     L   +  R         
Sbjct: 1193 CYSLSS------------------SSIRMLMSQKLHESGCTHILFPNTTDR--------- 1225

Query: 867  SEIPEWFMYQNEGSSIT 883
              IP+WF +Q+ G +I+
Sbjct: 1226 --IPDWFEHQSRGDTIS 1240


>gi|357513945|ref|XP_003627261.1| Resistance protein [Medicago truncatula]
 gi|355521283|gb|AET01737.1| Resistance protein [Medicago truncatula]
          Length = 961

 Score =  342 bits (878), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 205/521 (39%), Positives = 304/521 (58%), Gaps = 21/521 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++SR  K+   + +  S V MIGI GMG  GKTT A+ +Y+ I  +F    F++NVRE+ 
Sbjct: 181 LESRMHKVIEFIATQPSKVCMIGIWGMGRSGKTTTAKAIYNQIHRKFLNRSFIENVREVC 240

Query: 61  SK--GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            K   G + LQ+QLLS +L    N I +   G   +  R Q KK+L+V+DDV  V+QL++
Sbjct: 241 EKENRGTIHLQQQLLSDILN-TKNKIHSPALGTTKIEKRFQGKKLLVVLDDVTTVEQLKA 299

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L GN   FG GS  I+T+RD  LL    VD V     +   + L+LF+  AF+   P++ 
Sbjct: 300 LCGNPRLFGPGSVFIVTTRDARLLNLVKVDYVCTMKEMEEKDPLELFSWHAFRQPSPIKN 359

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             +LS  ++ Y GGLPLALEV+GS+L GR+  EW S L +LE  P  ++ + L+IS+DGL
Sbjct: 360 FSELSRTVVAYCGGLPLALEVIGSYLYGRTKQEWESVLLKLERIPNDQVQEKLRISYDGL 419

Query: 239 Q-ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHD 296
           + ++ K IFLDI CFF G DR YVT  L GCG +  IGI VL+E+ L+ +  NN L MHD
Sbjct: 420 KDDMAKDIFLDICCFFIGKDRAYVTEILNGCGLYADIGITVLVERSLVKIEKNNKLGMHD 479

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL+++G++IV++ S +  GKRSRLW  E+V  VLT++T    V     D++         
Sbjct: 480 LLRDMGREIVRQSSAKNPGKRSRLWFHEDVHDVLTKNT----VFRFCTDSF--------- 526

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
              +         L   C + L      +S +LR +  +G+ L  +P +   +  + + +
Sbjct: 527 --MEMKQLKQLKLLQLDC-VDLAGDYGCISKQLRWVSVQGFTLNCIPDDFYQENLVALDL 583

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
            +S+I ++W     L+KLK++ LSHS  L   PDF+  PNLEKLI++ C  L E+H S+ 
Sbjct: 584 KHSKIKQVWNETMFLEKLKILNLSHSRYLKHTPDFSKLPNLEKLIMKDCPSLSEVHQSIG 643

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTIS 517
               ++++N+KDCTSL  LP  I     + + +KSL T I+
Sbjct: 644 DLKNVLLINLKDCTSLSNLPRNIYQLEEDIMQMKSLTTLIA 684



 Score = 51.2 bits (121), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 146/366 (39%), Gaps = 61/366 (16%)

Query: 569 LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSI 627
           LV L+LK+ +  ++   T+  L+ L+ L LS    LK  P+  + + +L +L + D  S+
Sbjct: 578 LVALDLKHSKIKQVWNETMF-LEKLKILNLSHSRYLKHTPDFSK-LPNLEKLIMKDCPSL 635

Query: 628 KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
            EV  SI  L  + L+NL DC +L  LP +I  L+                 E + Q++S
Sbjct: 636 SEVHQSIGDLKNVLLINLKDCTSLSNLPRNIYQLE-----------------EDIMQMKS 678

Query: 688 LEELDISGTAVPHSTSWYSYIPINLMR-KSVALKLPSLSGLCSLRKLNLTDCNLME---- 742
           L  L  + TAV         +P  L+R KS+        G  SL +     C++      
Sbjct: 679 LTTLIANDTAVKE-------VPCLLVRSKSI--------GYLSLCRYEGLSCDVFPSLIW 723

Query: 743 -------GALP--SDIGNLC-SLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSL 792
                   +LP  S  GN+  SL    +  N+   L   I  LSKL  + ++   ++Q  
Sbjct: 724 SWMSPTLNSLPRTSPFGNISLSLSSTDIHNNNLGFLSPMIRSLSKLRTVWVQCRSKVQLT 783

Query: 793 PQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKL-LGNKSLAFSMLREYLE 851
            +L   + Q  VN         D  +   S       L SL + +G+  +      + + 
Sbjct: 784 QELLRILNQCDVN--------FDESETSHSSEISNLSLRSLLIGMGSCHIIIDTRGKSIS 835

Query: 852 AVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS 911
               T       +PG   P W  Y  EG S     P ++   + + G  +C V+     +
Sbjct: 836 QGLTTNGSSDFFIPGGNYPSWLAYTGEGPSALFQVPRDI--DRHMKGIILCVVYSSTSEN 893

Query: 912 RGNNCF 917
            G  C 
Sbjct: 894 MGPECL 899


>gi|227438221|gb|ACP30600.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 909

 Score =  342 bits (878), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 233/681 (34%), Positives = 368/681 (54%), Gaps = 72/681 (10%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL------VSLQ 69
           S++V+M+GI G  G+GKTT+AR ++  +S  F+ S F++N +    + GL      + LQ
Sbjct: 200 SNEVKMVGIWGPAGIGKTTVARALFKQLSVSFQHSIFVENFKGSYRRTGLDEYGFKLRLQ 259

Query: 70  RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG 129
            Q LS+++   D+    + D + ++  RLQ  KVL+V+DDV  ++QL +L    +WFG G
Sbjct: 260 EQFLSEVI---DHKHMKIHD-LGLVKERLQDLKVLVVLDDVDRLEQLDALVKQSQWFGPG 315

Query: 130 SRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRY 189
           SRII+T+ ++ LL+ HG+  +Y+    +  E+L++F   AF         ++L+  I + 
Sbjct: 316 SRIIVTTENKQLLRAHGIKLIYQMGFPSKSESLEIFCQSAFGKSSAPDGYIELATEITKL 375

Query: 190 AGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDI 249
           AG LPLAL+VLGS L G + DE ++ L RL      +I ++L++ +DGL + +K IFL +
Sbjct: 376 AGYLPLALKVLGSSLRGMNKDEQKAALPRLRTSLSEDIRNVLRVGYDGLHDKDKSIFLYV 435

Query: 250 ACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH--NNTLWMHDLLQELGQQIVQ 307
           AC F G + +YV   L   G     G++VL  + LI +   N T+ MH LLQ LG+++V 
Sbjct: 436 ACLFSGENVEYVKLLLASSGLDVNFGLQVLTNRSLIYILRCNRTIMMHSLLQHLGREVVC 495

Query: 308 RQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTN 367
            QS +E GKR  L    E+  VL ++TGT  + GI LD     NE +L  + ++F  M N
Sbjct: 496 AQSIDEPGKRQFLVDASEIYDVLVDNTGTAALLGISLD-ISTINEWFL--NERSFGGMHN 552

Query: 368 LRLLKI---------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
           L  LK            L LP GL+YL  +LRLL W  YP   LP + + +  + + +  
Sbjct: 553 LMFLKFYKSSLGKNQTELHLPRGLDYLPRKLRLLHWDTYPTTSLPLSFRPEFLVVLNLRE 612

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           S++ +LW+G + L  L  M LS SENL  +PD + A N+E+L L  C+ L  + PS+   
Sbjct: 613 SKLEKLWEGEQPLRSLTHMDLSMSENLKEIPDLSKAVNMEELCLSHCSSLVMLPPSVKNL 672

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
           NKL++L M+ C+ L ++P  I ++SL  LNL          KC          +   FP+
Sbjct: 673 NKLVVLEMECCSKLESIPKNINLESLSILNLD---------KC---------SRLTTFPD 714

Query: 539 IVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKL 598
           +  ++ +LS   +  TAI                        E +P T+ +   L +L +
Sbjct: 715 VSSNIGYLS---ISETAI------------------------EQVPETIMSWPNLAALDM 747

Query: 599 SGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSI 658
           SGC+ LK FP +  +++ L       T I+EVPS ++ L +L  L ++ C  L  + S I
Sbjct: 748 SGCTNLKTFPCLPNTIEWLD---FSRTEIEEVPSRVQNLYRLSKLLMNSCMKLRSISSGI 804

Query: 659 IALKSLKTLNLSGCFKLENVP 679
             L++++TL+  GC  + N P
Sbjct: 805 SRLENIETLDFLGCKNVVNYP 825



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 46/274 (16%)

Query: 549 LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
           LH +      LPLS      LV+LNL+  + LE L      L+ L  + LS    LK+ P
Sbjct: 586 LHWDTYPTTSLPLSFRP-EFLVVLNLRESK-LEKLWEGEQPLRSLTHMDLSMSENLKEIP 643

Query: 609 EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
           ++ +++                         +E L LS C +LV LP S+  L  L  L 
Sbjct: 644 DLSKAVN------------------------MEELCLSHCSSLVMLPPSVKNLNKLVVLE 679

Query: 669 LSGCFKLENVPETLGQIESLEELDISG----TAVPHSTSWYSYIPINLMRKSVALKLP-S 723
           +  C KLE++P+ +  +ESL  L++      T  P  +S   Y+ I+   ++   ++P +
Sbjct: 680 MECCSKLESIPKNIN-LESLSILNLDKCSRLTTFPDVSSNIGYLSIS---ETAIEQVPET 735

Query: 724 LSGLCSLRKLNLTDCNLMEG--ALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNI 781
           +    +L  L+++ C  ++    LP+ I      + L  S+     +P+ + +L +L  +
Sbjct: 736 IMSWPNLAALDMSGCTNLKTFPCLPNTI------EWLDFSRTEIEEVPSRVQNLYRLSKL 789

Query: 782 ELEDCKRLQSLP---QLPPNIRQVRVNGCASLVT 812
            +  C +L+S+        NI  +   GC ++V 
Sbjct: 790 LMNSCMKLRSISSGISRLENIETLDFLGCKNVVN 823


>gi|356570335|ref|XP_003553345.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1082

 Score =  342 bits (878), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 237/676 (35%), Positives = 374/676 (55%), Gaps = 32/676 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR ++++ L+D GS DV  M+GI G+GG+GKTT+A  VY+ I+  FEA  FL+NVRE 
Sbjct: 203 LESRMQEVKALLDVGSDDVVHMLGIHGLGGVGKTTLAAAVYNSIADHFEALCFLENVRET 262

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S K G+  LQ  LLS+   + ++ +  V  GI ++  RLQ++K+LL++DDV   +QLQ+L
Sbjct: 263 SKKHGIQHLQSNLLSE--TVGEHKLIGVKQGISIIQHRLQQQKILLILDDVDKREQLQAL 320

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  + FG GSR+IIT+RD+ LL  HGV+  Y+ + LN + AL+L + KAFK  +     
Sbjct: 321 AGRPDLFGLGSRVIITTRDKQLLACHGVERTYEVNELNEEHALELLSWKAFKLEKVDPFY 380

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R   YA GLPLALEV+GS L GR++++W S L+R +  P  EI +IL++S+D L+
Sbjct: 381 KDVLNRAATYASGLPLALEVIGSNLYGRNIEQWISALDRYKRIPNKEIQEILKVSYDALE 440

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVI-GIRVLIEKCLITVH-NNTLWMHDL 297
           E E+ +FLDIAC FK      V + L     H +   I VL+EK LI +  +  + +HDL
Sbjct: 441 EDEQSVFLDIACCFKKYGLVEVEDILHAHHGHCMKHHIGVLVEKSLIKISCDGNVTLHDL 500

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           ++++G++IV+++S +E GKRSRLW  +++  VL E+ GT  +E I +D +    E+ +  
Sbjct: 501 IEDMGKEIVRQESVKEPGKRSRLWFPKDIVQVLEENKGTSQIEIICMD-FPIFQEIQIEW 559

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
              AF KM  L+ L I N     G ++L N LR+L W+ YP +  P +    K     + 
Sbjct: 560 DGYAFKKMKKLKTLNIRNGHFSKGPKHLPNTLRVLEWKRYPTQNFPYDFYPKKLAICKLP 619

Query: 418 YS-----RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
           YS      +  L K       L  +   + + L  +PD    P+LE L  + C  L  IH
Sbjct: 620 YSGFTSHELAVLLKKASKFVNLTSLNFDYCQYLTHIPDVFCLPHLENLSFQWCQNLSAIH 679

Query: 473 PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK------SLPTTISGLKCLSTLD 526
            S+    KL IL+ + C+ L + P  + + SLE+  L+      S P  +  ++ +  LD
Sbjct: 680 YSVGFLEKLKILDGEGCSRLKSFPA-MKLTSLEQFKLRYCHSLESFPEILGRMESIKELD 738

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPL-SIELLSGLVLL---------NLKN 576
           +  +   ++FP    ++  L +L L  T + G+PL S+ ++  LV +           ++
Sbjct: 739 LK-ETPVKKFPLSFGNLTRLQKLQLSLTGVNGIPLSSLGMMPDLVSIIGWRWELSPFPED 797

Query: 577 CRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRS-MKDLSELFLDGTSIKEVPSSIE 635
               E +  T+S+   ++ L+   C+    F  IV     ++  L L G S   +P  I+
Sbjct: 798 DDGAEKVSSTLSS--NIQYLQFRCCNLTDDFFRIVLPWFANVKNLDLPGNSFTVIPECIK 855

Query: 636 LLTKLELLNLSDCKNL 651
               L  LNL+ C+ L
Sbjct: 856 ECHFLTRLNLNYCEFL 871



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 143/367 (38%), Gaps = 87/367 (23%)

Query: 580 LEILPVTVSNLKCLRSLKLSGCSKLKKFPEI--VRSMKDLSELFLDGTSIKEVPSSIELL 637
           L +L    S    L SL    C  L   P++  +  +++LS  F    ++  +  S+  L
Sbjct: 628 LAVLLKKASKFVNLTSLNFDYCQYLTHIPDVFCLPHLENLS--FQWCQNLSAIHYSVGFL 685

Query: 638 TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA 697
            KL++L+   C  L   P+  + L SL+   L  C  LE+ PE LG++ES++ELD+  T 
Sbjct: 686 EKLKILDGEGCSRLKSFPA--MKLTSLEQFKLRYCHSLESFPEILGRMESIKELDLKETP 743

Query: 698 VPHSTSWYSYIPINLMR-KSVALKLPSLSGL----------------------------- 727
           V      +     NL R + + L L  ++G+                             
Sbjct: 744 VKKFPLSFG----NLTRLQKLQLSLTGVNGIPLSSLGMMPDLVSIIGWRWELSPFPEDDD 799

Query: 728 ----------CSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSK 777
                      +++ L    CNL +      +    ++K L L  NSF  +P  I     
Sbjct: 800 GAEKVSSTLSSNIQYLQFRCCNLTDDFFRIVLPWFANVKNLDLPGNSFTVIPECIKECHF 859

Query: 778 LLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLG 837
           L  + L  C+ L+ +  +PPN++      C SL +       C+S               
Sbjct: 860 LTRLNLNYCEFLREIRGIPPNLKYFSAIECRSLTS------SCRS--------------- 898

Query: 838 NKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLV 897
                  +L + L    +T  +L    PG+ IPEWF +Q      T   P + + + KL 
Sbjct: 899 ------KLLNQDLHEGGSTFFYL----PGANIPEWFEFQ------TSELPISFWFRNKLP 942

Query: 898 GYAICCV 904
             AIC V
Sbjct: 943 AIAICLV 949


>gi|357514703|ref|XP_003627640.1| NBS-LRR resistance-like protein 4T [Medicago truncatula]
 gi|355521662|gb|AET02116.1| NBS-LRR resistance-like protein 4T [Medicago truncatula]
          Length = 1151

 Score =  342 bits (877), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 244/708 (34%), Positives = 380/708 (53%), Gaps = 50/708 (7%)

Query: 2   DSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS 61
           D     +  L+   S +VR IGI GMGG+GKTT+A  ++  +S  +E S FL+NV E S 
Sbjct: 192 DENYSSIESLLKVDSREVRTIGIWGMGGIGKTTLAAAIFQKVSSMYEGSCFLENVTEESK 251

Query: 62  KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAG 121
           + GL     +LLS+LL   D  I        M+  RL+R K  +V+DDV  ++ L +L G
Sbjct: 252 RHGLSYTYNRLLSKLLG-EDLHIETPKVISSMVMKRLKRMKAFIVLDDVRTLELLDNLIG 310

Query: 122 -NREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
              +  G GSR+I+T+RD+H+L   G+DE+++   +N   +++LF++ AFK   P +   
Sbjct: 311 AGHDCLGVGSRVIVTTRDKHVLTGGGIDEIHQVKEMNSQNSIRLFSLNAFKKILPNEGYE 370

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           ++S  ++ Y  G PLAL+VLGSFL  +S  EW S L +L+  P +EI  +L++S+D L +
Sbjct: 371 EISNNVVSYTKGNPLALKVLGSFLRTKSKKEWNSALNKLKEIPNAEIQKVLRLSYDELDD 430

Query: 241 LEKKIFLDIACFFKG-NDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLL 298
            EK IFLD+ACFFKG      VT  L  CGF   IGIR L++K L+T+ + N + MHDL+
Sbjct: 431 TEKNIFLDVACFFKGFGSSSSVTKILNACGFFADIGIRNLLDKALVTITSENFIKMHDLI 490

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           +++G++IV+ +S +   +RSRLW  +E+C VLT++ GT  VE I LD    +    +  +
Sbjct: 491 KQMGREIVREESIKNPRQRSRLWNADEICDVLTDNNGTTAVESICLD---MDQTTCINLN 547

Query: 359 AKAFSKMTNLRLLKICN----------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQM 408
           + AF+KM NL++L   +          + L  G+++  N LR  GW  YPL  LPSN   
Sbjct: 548 SNAFTKMPNLKMLAFNDHHQDVMGFNSVHLLEGVDFFPNNLRSFGWSAYPLNSLPSNFSP 607

Query: 409 DKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
              +E+Y+ YS + +LW G ++   L+ + LS S  L+  P+F+ APNL+ + LE C  +
Sbjct: 608 SNLVELYLPYSNLEKLWNGAQNFPSLERIDLSKSARLLECPNFSNAPNLKHIKLENCESI 667

Query: 469 YEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLK---SLPTTISGL 519
             + PS+    KL  LN+  C SL +L      +S ++L      NL+   S+P   +  
Sbjct: 668 CHVDPSIFNLPKLEDLNVSGCKSLKSLYSSTRSQSFQRLYAGECYNLQEFISMPQNTNDP 727

Query: 520 KCLSTLDVSGDLKFRE-----FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL 574
              +T   S  L  R      FP I E +  L E             S ++      +N 
Sbjct: 728 STTTTGLTSSTLLIRNLDVFTFP-ICESLVDLPE-----------NFSYDITLSDSKMND 775

Query: 575 KNCRSL--EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPS 632
           K+  +   ++LP      + +R L  S C  L + P+ +  +  L  L L    I  +P 
Sbjct: 776 KDTLTTLHKLLPSPC--FRYVRGLCFSYCHNLSEIPDSISLLSSLENLGLFACPIISLPE 833

Query: 633 SIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
           SI  L +L    +++C+ L  +PS   +++S +  N   C  L+NV E
Sbjct: 834 SINCLPRLMFFEVANCEMLQSIPSLPQSIQSFRVWN---CESLQNVIE 878



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 120/269 (44%), Gaps = 41/269 (15%)

Query: 579 SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELL 637
           +LE L     N   L  + LS  ++L + P    +  +L  + L+   SI  V  SI  L
Sbjct: 619 NLEKLWNGAQNFPSLERIDLSKSARLLECPNFSNA-PNLKHIKLENCESICHVDPSIFNL 677

Query: 638 TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE---NVPETLGQ---------- 684
            KLE LN+S CK+L  L SS  + +S + L    C+ L+   ++P+              
Sbjct: 678 PKLEDLNVSGCKSLKSLYSSTRS-QSFQRLYAGECYNLQEFISMPQNTNDPSTTTTGLTS 736

Query: 685 -IESLEELDI-------SGTAVPHSTSWYSYIPINLMRKSVALK-----LPS-----LSG 726
               +  LD+       S   +P + S+   +  + M     L      LPS     + G
Sbjct: 737 STLLIRNLDVFTFPICESLVDLPENFSYDITLSDSKMNDKDTLTTLHKLLPSPCFRYVRG 796

Query: 727 LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDC 786
           LC     NL++       +P  I  L SL+ L L     +SLP SI  L +L+  E+ +C
Sbjct: 797 LCFSYCHNLSE-------IPDSISLLSSLENLGLFACPIISLPESINCLPRLMFFEVANC 849

Query: 787 KRLQSLPQLPPNIRQVRVNGCASLVTLLD 815
           + LQS+P LP +I+  RV  C SL  +++
Sbjct: 850 EMLQSIPSLPQSIQSFRVWNCESLQNVIE 878


>gi|356524185|ref|XP_003530712.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 882

 Score =  342 bits (877), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 242/682 (35%), Positives = 363/682 (53%), Gaps = 123/682 (18%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++  C+++  L+  GSS+V+ +GI GMGG+GKTT+A  +YD +SH+FE + FL N+ E S
Sbjct: 198 IEDHCKQIESLLKIGSSEVKTLGIWGMGGIGKTTLATTLYDKLSHKFEDACFLANLSEQS 257

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            K    S     ++ L +L  N             SRLQ KKVL+++DDV   +QL  + 
Sbjct: 258 DKPKNRSFGNFDMANLEQLDKNH------------SRLQDKKVLIILDDVTTSEQLDKII 305

Query: 121 GNRE--WFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            + +  + G GSR+I+T+RD+ +L    VDE+Y     ++D++LQLF + AF   QP   
Sbjct: 306 PDFDCDFLGPGSRVIVTTRDKQILSR--VDEIYPVGEWSFDKSLQLFCLTAFGEKQPNDG 363

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
              LS  ++ Y  G+PLAL+VLG+ L  RS + W   L +L+  P  EI  +L++S+DGL
Sbjct: 364 YADLSRMVVSYCKGIPLALKVLGASLRSRSKEIWECELRKLQKIPNKEIHKVLKLSYDGL 423

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDL 297
              E+ IFLDIACFFKG DR +VT  LE   F P  GI +L++K LIT+ + N + MHDL
Sbjct: 424 DRSEQDIFLDIACFFKGRDRCWVTRVLEAFEFFPAPGINILLDKALITISDSNLILMHDL 483

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           +QE+G++IV ++S +  G+R+RLW+ EEV  VL  + GT++VEGI LD      ++ L  
Sbjct: 484 IQEMGREIVHQESKDP-GRRTRLWRHEEVHDVLKYNKGTDVVEGISLDLSRLNEDLNL-- 540

Query: 358 SAKAFSKMTNLRLL----------KICNLQLPNGLE--YLSNRLRLLGW----------- 394
           S+ + +KMTNLR L          +I N  LPNGLE  YLSN +  L +           
Sbjct: 541 SSNSLAKMTNLRFLRIDGESWLSDRIFNGYLPNGLESLYLSNDVEPLYFPGLESLVLYFP 600

Query: 395 RGYPLKFLPSNLQ----MDKTIEIY---------------------------MCY----- 418
            G+   +LP+ L+    +D  + +Y                           +CY     
Sbjct: 601 NGHVSSYLPNGLESFYFLDGPVSLYLPNGLESLYFPSGLESLSNQLRYLHWDLCYLESLP 660

Query: 419 ---------------SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
                          S++ +LW G+++L  LK + LS+SE+LI +P+ + A NLE + L 
Sbjct: 661 PNFCAEQLVVLHMKFSKLKKLWDGVQNLVNLKEIDLSYSEDLIEIPNLSEAENLESISLS 720

Query: 464 GCTRLYEIHPSLLLHNK-LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCL 522
           GC  L+++H    +H+K L  + +  C+SL      +  + + KLNL    T IS     
Sbjct: 721 GCKSLHKLH----VHSKSLRAMELDGCSSLKEF--SVTSEKMTKLNLSY--TNIS----- 767

Query: 523 STLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEI 582
                       E    + H+  L +L+L GT +  LP +I+ LS L  L L  CR L  
Sbjct: 768 ------------ELSSSIGHLVSLEKLYLRGTNVESLPANIKNLSMLTSLRLDGCRKLMS 815

Query: 583 LPVTVSNLKCLRSLKLSGCSKL 604
           LP    +   LR L ++GC KL
Sbjct: 816 LPELPPS---LRLLDINGCKKL 834



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 23/172 (13%)

Query: 651 LVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPI 710
           L +L   +  L +LK ++LS    L  +P  L + E+LE + +SG    H          
Sbjct: 678 LKKLWDGVQNLVNLKEIDLSYSEDLIEIP-NLSEAENLESISLSGCKSLH---------- 726

Query: 711 NLMRKSVALKLPSLSGLCSLR----------KLNLTDCNLMEGALPSDIGNLCSLKELYL 760
            L   S +L+   L G  SL+          KLNL+  N+ E  L S IG+L SL++LYL
Sbjct: 727 KLHVHSKSLRAMELDGCSSLKEFSVTSEKMTKLNLSYTNISE--LSSSIGHLVSLEKLYL 784

Query: 761 SKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVT 812
              +  SLP +I +LS L ++ L+ C++L SLP+LPP++R + +NGC  L++
Sbjct: 785 RGTNVESLPANIKNLSMLTSLRLDGCRKLMSLPELPPSLRLLDINGCKKLMS 836


>gi|356559373|ref|XP_003547974.1| PREDICTED: TMV resistance protein N isoform 2 [Glycine max]
          Length = 1097

 Score =  342 bits (877), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 259/727 (35%), Positives = 375/727 (51%), Gaps = 68/727 (9%)

Query: 8   LRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLV 66
           ++ L+D G+ DV  M+GI G+GG+GKTT+A  VY+ I+  FEA  FL+NVRE S+K GL 
Sbjct: 198 VKSLLDVGADDVVHMVGIHGLGGVGKTTLAVAVYNSIACHFEACCFLENVRETSNKKGLE 257

Query: 67  SLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWF 126
           SLQ  LLS+ +      + N  +G D++  +L+ KKVLLV+DDV + +QLQ++  + +WF
Sbjct: 258 SLQNILLSKTVGDMKIEVTNSREGTDIIKRKLKEKKVLLVLDDVNEHEQLQAIIDSPDWF 317

Query: 127 GSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQ-LSAR 185
           G GSR+IIT+RDE LL  H V   YK   LN   ALQL   KAF   + +      +  R
Sbjct: 318 GRGSRVIITTRDEQLLVLHNVKRTYKVRELNEKHALQLLTQKAFGLEKKVDPSYHDILNR 377

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
            + YA GLPLAL+V+GS L G+S++EW S L+  E  P   I   L++S+D L E EK I
Sbjct: 378 AVTYASGLPLALKVIGSNLFGKSIEEWESVLDGYERSPDKSIYMTLKVSYDALNEDEKSI 437

Query: 246 FLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNN-----TLWMHDLLQ 299
           FLDIAC FK  +   V + L    G      I VL+EK LI +H +      + +HDL++
Sbjct: 438 FLDIACCFKDYELAKVQDILYAHYGRSMKYDIGVLVEKSLINIHRSWYDKEVMRLHDLIE 497

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           ++G++IV+R+SP+E GKRSRLW  E++  VL E  GT  +E I ++      EV      
Sbjct: 498 DVGKEIVRRESPKEPGKRSRLWSHEDIKEVLQEKKGTGKIEIICMNFSSFGKEVEW--DG 555

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
            A  KM NL+ L I +     G ++L N LR+L W   P + LP N    +     + +S
Sbjct: 556 DALKKMENLKTLIIKSACFSKGPKHLPNSLRVLEWWRCPSQDLPHNFNPKQLAICKLPHS 615

Query: 420 RIGELWKGI-----KHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
               L  G+     K +  L  +IL   ++L  +PD +    LEKL  + C  L+ IHPS
Sbjct: 616 NFTSL--GLAPLFDKSVVNLTSLILDECDSLTEIPDVSCLSKLEKLSFKDCRNLFTIHPS 673

Query: 475 LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFR 534
           + L  KL IL+ K C  L + P                P  ++ L+   +LD+S      
Sbjct: 674 VGLLEKLKILDAKGCPELKSFP----------------PLKLTSLE---SLDLSYCSSLE 714

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
            FPEI+  ME+++EL L    I  LP S   L+ L  L L +       P +   L    
Sbjct: 715 SFPEILGKMENITELDLSECPITKLPPSFRNLTRLQELELDHG------PESADQLMDFD 768

Query: 595 SLKLSGCSKLKKFPEIVR-SMKDLSELFLDGTSIK---EVPSSIELLT------------ 638
           +  L   S +   PE+   S + L    L   ++K    V SS+  LT            
Sbjct: 769 AATL--ISNICMMPELYDISARRLQWRLLPDDALKLTSVVCSSVHSLTLELSDELLPLFL 826

Query: 639 ----KLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLEN---VPETLGQIESLEEL 691
                +E L L   K  V +P  I   + L  L LSGC +L+    +P  L +  + E  
Sbjct: 827 SWFVNVENLRLEGSKCTV-IPECIKECRFLSILILSGCDRLQEIRGIPPNLERFAATESP 885

Query: 692 DISGTAV 698
           D++ +++
Sbjct: 886 DLTSSSI 892



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 105/450 (23%), Positives = 166/450 (36%), Gaps = 135/450 (30%)

Query: 576  NCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSI 634
            N  SL + P+   ++  L SL L  C  L + P+ V  +  L +L F D  ++  +  S+
Sbjct: 616  NFTSLGLAPLFDKSVVNLTSLILDECDSLTEIPD-VSCLSKLEKLSFKDCRNLFTIHPSV 674

Query: 635  ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
             LL KL++L+   C  L   P   + L SL++L+LS C  LE+ PE LG++E++ ELD+S
Sbjct: 675  GLLEKLKILDAKGCPELKSFPP--LKLTSLESLDLSYCSSLESFPEILGKMENITELDLS 732

Query: 695  GTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNL-----TDCNLMEGALPSDI 749
               +       + +P            PS   L  L++L L     +   LM+    + I
Sbjct: 733  ECPI-------TKLP------------PSFRNLTRLQELELDHGPESADQLMDFDAATLI 773

Query: 750  GNLCSLKELY-----------LSKNSF--VSLPTSITH--------------LSKLLNIE 782
             N+C + ELY           L  ++    S+  S  H              LS  +N+E
Sbjct: 774  SNICMMPELYDISARRLQWRLLPDDALKLTSVVCSSVHSLTLELSDELLPLFLSWFVNVE 833

Query: 783  --------------------------LEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDA 816
                                      L  C RLQ +  +PPN+ +        L +    
Sbjct: 834  NLRLEGSKCTVIPECIKECRFLSILILSGCDRLQEIRGIPPNLERFAATESPDLTS---- 889

Query: 817  LKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQ 876
                           S+ +L N+ L             +   H    +P  +IPEWF  Q
Sbjct: 890  --------------SSISMLLNQEL-------------HEAGHTDFSLPILKIPEWFECQ 922

Query: 877  NEGSSI--------------TVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNN-CFGSYP 921
            + G SI               V      Y+   LV   I    H  K+ R ++ CF   P
Sbjct: 923  SRGPSIFFWFRNEFPAITFCIVKSHFEAYSSDSLVLSVIINKKHEHKHDRFHDGCFSKTP 982

Query: 922  THQLNCHIGHGIYGIGFRDKFGQAGSDHLW 951
            +          I+ +  +D   +  S   W
Sbjct: 983  S--------TSIFRLQMKDNLDEEISKSEW 1004


>gi|357500091|ref|XP_003620334.1| Sucrose synthase [Medicago truncatula]
 gi|355495349|gb|AES76552.1| Sucrose synthase [Medicago truncatula]
          Length = 1319

 Score =  342 bits (877), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 237/673 (35%), Positives = 365/673 (54%), Gaps = 72/673 (10%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + SR + ++ L+D GS D V M+G+ G GGLGK+T+ + +Y+ IS +FE S FL+NVRE 
Sbjct: 199 LQSRVQHVKSLLDEGSDDGVHMVGLYGTGGLGKSTLGKAIYNFISDQFECSCFLENVREN 258

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+   L  LQ +LL + L+     + +V +GI  +  RL  KK LL++DDV D+KQL +L
Sbjct: 259 SASNKLKHLQEELLLKTLQ-QKTKLGSVSEGIPYIKERLHTKKTLLILDDVDDMKQLHAL 317

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG GSR+IIT+RD+HLL++HG+   ++  GL   EAL+L    AFK  +     
Sbjct: 318 AGGPDWFGRGSRVIITTRDKHLLRSHGIKSTHEVKGLYGTEALELLRWMAFKNNKVPSSY 377

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R + YA GLPL LE++GS L G++++EW+ TL+  E  P  +I +IL++S+D L+
Sbjct: 378 EDVLNRAVSYASGLPLVLEIVGSNLFGKTIEEWKGTLDGYEKIPNKKIHEILKVSYDALE 437

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVI-GIRVLIEKCLITVHN-------NT 291
           E ++ +FLDIAC FKG       + L     H +   + VL EK L+ + +       N 
Sbjct: 438 EEQQSVFLDIACCFKGCGWKEFEDILRAHYGHCIKHHLGVLAEKSLVKISSTSYSGSINH 497

Query: 292 LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
           + +HD ++++G+++V+++SP+E G+RSRLW ++++ +VL E+TGT  +E I + N+  E 
Sbjct: 498 VTLHDFIEDMGKEVVRQESPKEPGERSRLWCQDDIVNVLKENTGTRKIEMIYM-NFPSE- 555

Query: 352 EVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           E  +    KAF KMT L+ L I N+    GL+YL + LR+L  RG   + L S     K 
Sbjct: 556 EFVIDKKGKAFKKMTRLKTLIIENVHFSKGLKYLPSSLRVLKLRGCLSESLLSCSLSKK- 614

Query: 412 IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
                                 +K++ L   E L  +PD +G  NLEK   E C  L  I
Sbjct: 615 -------------------FQNMKILTLDRCEYLTHIPDVSGLQNLEKFSFEYCENLITI 655

Query: 472 HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDL 531
           H S+   NKL  L+   C+ L   P                P    GL  L+ L++S   
Sbjct: 656 HNSIGHLNKLERLSANGCSKLERFP----------------PL---GLASLNELNISYCE 696

Query: 532 KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE---------- 581
             + FP+++  M ++  + L+ T+IR LP S + L+ L  L L  C  L           
Sbjct: 697 SLKSFPKLLCKMTNMKTIWLQKTSIRELPSSFQNLNELFQLTLWECGMLRFPKQNDQMYS 756

Query: 582 ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLE 641
           I+   V+NL  L + KLS     +  P  ++   ++  L L   + K +P   E L++  
Sbjct: 757 IVFSKVTNL-VLNNCKLSD----ECLPIFLKWCVNVKLLDLSRNNFKLIP---ECLSECH 808

Query: 642 LLN---LSDCKNL 651
           LLN   L +CK+L
Sbjct: 809 LLNNLILDNCKSL 821



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 111/227 (48%), Gaps = 17/227 (7%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
           ++ L L  C  L   P+ V  +++L +  F    ++  + +SI  L KLE L+ + C  L
Sbjct: 618 MKILTLDRCEYLTHIPD-VSGLQNLEKFSFEYCENLITIHNSIGHLNKLERLSANGCSKL 676

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPIN 711
            R P   + L SL  LN+S C  L++ P+ L ++ +++ + +  T++    S  S+  +N
Sbjct: 677 ERFPP--LGLASLNELNISYCESLKSFPKLLCKMTNMKTIWLQKTSIRELPS--SFQNLN 732

Query: 712 -----LMRKSVALKLPSLSG------LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
                 + +   L+ P  +          +  L L +C L +  LP  +    ++K L L
Sbjct: 733 ELFQLTLWECGMLRFPKQNDQMYSIVFSKVTNLVLNNCKLSDECLPIFLKWCVNVKLLDL 792

Query: 761 SKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGC 807
           S+N+F  +P  ++    L N+ L++CK L+ +  + PN+ ++   GC
Sbjct: 793 SRNNFKLIPECLSECHLLNNLILDNCKSLEEIRGIAPNLERLSAMGC 839


>gi|224060459|ref|XP_002300210.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222847468|gb|EEE85015.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 524

 Score =  342 bits (876), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 171/333 (51%), Positives = 243/333 (72%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +++  E++  ++++ S  V M+G+CG+GG+GKTTI++ VY+LI+++FE S FL NVREIS
Sbjct: 178 LNNHIEEINHMLNTRSDGVCMVGLCGIGGVGKTTISKAVYNLIANQFEGSCFLSNVREIS 237

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            + GL+ LQ  LL ++L   +  + +V  GI+++  RL+ KKVL+VIDD  ++ QL+ LA
Sbjct: 238 KQHGLLRLQETLLYEILGDKNLVLGSVDRGINVIRDRLRNKKVLIVIDDADNLDQLKQLA 297

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G  +WFG GSR+IIT+RDEHLL  HGV+ +YK   L  D+AL LF+  AF+   P ++ +
Sbjct: 298 GEPDWFGLGSRVIITTRDEHLLVAHGVERLYKVKELCPDDALMLFSWNAFRNPHPSEDHL 357

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           ++S R +RYA GLPLAL VLG+FL GRS+ EW S L+RL+  P  +I ++L+ISFDGL+ 
Sbjct: 358 EVSLRAVRYAQGLPLALVVLGAFLYGRSIREWESELDRLKRIPNKQIYEVLKISFDGLEY 417

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            EK IFLDIA FFKG ++DYV   L+ C  +P IGI+VLIEK LI + NN + MH+LLQ 
Sbjct: 418 HEKTIFLDIARFFKGQEKDYVIKILDACDVNPDIGIQVLIEKSLIYIENNKIQMHELLQS 477

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTES 333
           +G+QIV ++SP   G+RSRLW  E+V HVLTE+
Sbjct: 478 MGRQIVHQESPNIPGRRSRLWFHEDVLHVLTEN 510


>gi|15237438|ref|NP_199457.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177582|dbj|BAB10813.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332008004|gb|AED95387.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1123

 Score =  341 bits (875), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 258/772 (33%), Positives = 400/772 (51%), Gaps = 96/772 (12%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EK+R L+   S +VRM+GI G  G+GKTTIAR ++  +S +F++S ++D      S  G 
Sbjct: 194 EKVRLLLHLESDEVRMVGIWGTSGIGKTTIARALFSNLSSQFQSSVYIDRAFISKSMEGY 253

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDM----LGSRLQRKKVLLVIDDVVDVKQLQSLAG 121
                   +  L+L +N ++ +    +M    +  RL+ +KVL++IDD+ D   L +L G
Sbjct: 254 GRANPDDYNMKLRLRENFLFEILGKKNMKIGAMEERLKHQKVLIIIDDLDDQDVLDALVG 313

Query: 122 NREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQ 181
             +WFGSGSRII+ ++++H L+ HG+D VY+    + + AL++F   AF+   P    ++
Sbjct: 314 RTQWFGSGSRIIVVTKNKHFLRAHGIDHVYEACLPSEELALEMFCRYAFRKNSPPDGFME 373

Query: 182 LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ-E 240
           LS+ +   AG LPL L+VLGS+L GR +++W   + RL+ +   +I   L++S+DGL  +
Sbjct: 374 LSSEVALRAGNLPLGLKVLGSYLRGRDIEDWMDMMPRLQNDLDGKIEKTLRVSYDGLNNK 433

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            ++ IF  IAC F G   + +   L        IG++ L++K LI V  +T+ MH LLQ+
Sbjct: 434 KDEAIFRHIACLFNGEKVNDIKLLLAESDLDVNIGLKNLVDKSLIFVREDTIEMHRLLQD 493

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G++IV+ QS E  G+R  L   + +  VL ++TGT+ V GI LD  +  + +Y+  SA 
Sbjct: 494 MGKEIVRAQSNEP-GEREFLVDSKHIYDVLEDNTGTKKVLGIALD-INETDGLYIHESA- 550

Query: 361 AFSKMTNLRLLKICNLQ-------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
            F  M NL  L     Q       L  G ++L  +LRLL W  YPL+ +PSN + +  ++
Sbjct: 551 -FKGMRNLLFLNFYTKQKKDVTWHLSEGFDHLPPKLRLLSWEKYPLRCMPSNFRPENLVK 609

Query: 414 IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
           + MC S++ +LW G+  L  L+ M L  SENL  +PD + A NL+KL +  CT L E+  
Sbjct: 610 LQMCESKLEKLWDGVHSLTGLRNMDLRGSENLKEIPDLSLATNLKKLDVSNCTSLVELSS 669

Query: 474 SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNL------KSLP---TTISGLKCLST 524
           ++   N+L  L M+ C +L  LP  I ++SL  LNL      +S P   TTIS L    T
Sbjct: 670 TIQNLNQLEELQMERCENLENLPIGINLESLYCLNLNGCSKLRSFPDISTTISELYLSET 729

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHL--------------------------------E 552
                     EFP  + H+E+L  L L                                +
Sbjct: 730 -------AIEEFPTEL-HLENLYYLGLYDMKSEKLWKRVQPLTPLMTMLSPSLTKLFLSD 781

Query: 553 GTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVR 612
             ++  LP S + L  L  LN+  C +LE LP  V NL+ L  L  SGCS+L+ FP+I  
Sbjct: 782 IPSLVELPSSFQNLHNLEHLNIARCTNLETLPTGV-NLELLEQLDFSGCSRLRSFPDIS- 839

Query: 613 SMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC 672
              ++  L LDGT I+EVP  IE   +L  L++  C NL                     
Sbjct: 840 --TNIFSLVLDGTGIEEVPWWIEDFYRLSFLSMIGCNNL--------------------- 876

Query: 673 FKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIP--INLMRKSVALKLP 722
              + V   + ++E LE +D S        +W + IP  + +  +++  KLP
Sbjct: 877 ---QGVSLNISKLEKLETVDFSDCEALSHANWDT-IPSAVAMATENIHSKLP 924



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 130/260 (50%), Gaps = 47/260 (18%)

Query: 588 SNLKCLRSLKLSGC-SKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNL 645
           SN +    +KL  C SKL+K  + V S+  L  + L G+ ++KE+P  + L T L+ L++
Sbjct: 600 SNFRPENLVKLQMCESKLEKLWDGVHSLTGLRNMDLRGSENLKEIPD-LSLATNLKKLDV 658

Query: 646 SDCKNLVRLPSSI-----------------------IALKSLKTLNLSGCFKLENVPETL 682
           S+C +LV L S+I                       I L+SL  LNL+GC KL + P+  
Sbjct: 659 SNCTSLVELSSTIQNLNQLEELQMERCENLENLPIGINLESLYCLNLNGCSKLRSFPDIS 718

Query: 683 GQIESLEELDISGTAVP------HSTSWYSYIPINLMR-----KSVALKLPSLSGLC-SL 730
             I    EL +S TA+       H  + Y Y+ +  M+     K V    P ++ L  SL
Sbjct: 719 TTI---SELYLSETAIEEFPTELHLENLY-YLGLYDMKSEKLWKRVQPLTPLMTMLSPSL 774

Query: 731 RKLNLTDC-NLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELEDCKR 788
            KL L+D  +L+E  LPS   NL +L+ L +++  +  +LPT + +L  L  ++   C R
Sbjct: 775 TKLFLSDIPSLVE--LPSSFQNLHNLEHLNIARCTNLETLPTGV-NLELLEQLDFSGCSR 831

Query: 789 LQSLPQLPPNIRQVRVNGCA 808
           L+S P +  NI  + ++G  
Sbjct: 832 LRSFPDISTNIFSLVLDGTG 851


>gi|295083319|gb|ADF78113.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  341 bits (875), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 234/589 (39%), Positives = 343/589 (58%), Gaps = 36/589 (6%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR  ++  L+D  S D V MIGI G+GG+GK+T+A  VY+LI+  F+ S FL ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  LL ++L   + ++ +V  G  ++  RLQRKKVLL++DDV   +QLQ++
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G   WFG GSR+IIT+RD+ LL +HGV   Y+   LN + ALQL   K+FKT +     
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            ++   ++ YA GLPLALEV+GS L G+S++EW+S +++ +  P  +IL+IL++SFD L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNN------TL 292
           E +K +FLDIAC F   D   V + L    G      I VL+EK LI    +       +
Sbjct: 432 EEQKNVFLDIACCFNRYDLTEVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPIV 491

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD-NYHHEN 351
            MHDL++++G++IV+++SP+E  KRSRLW  E++ HVL ++ GT  +E I LD     + 
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKE 551

Query: 352 EVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           E+ +  + KAF KM NL+ L I N +   G +YL N LR+L W  YP   LPS+    K 
Sbjct: 552 EIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPNNLRVLEWWRYPSHCLPSDFHPKKL 611

Query: 412 IEIYMCYSRIGE-----LWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
               + +S I       LWK   +   L+++     E L ++PD +G PNLE+   E C 
Sbjct: 612 AICKLPFSCISSFELDGLWKMFVN---LRILNFDRCEGLTQIPDVSGLPNLEEFSFECCF 668

Query: 467 RLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLD 526
            L  +H S+   +KL ILN   C  L + P  I + SLEKLNL           C S   
Sbjct: 669 NLITVHNSIGFLDKLKILNAFRCKRLRSFP-PIKLTSLEKLNLSF---------CYS--- 715

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLK 575
                    FP+I+  ME++ +L L  ++I  LP S + L+GL  L L+
Sbjct: 716 ------LESFPKILGKMENIRQLCLSESSITELPFSFQNLAGLQALELR 758



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 173/443 (39%), Gaps = 122/443 (27%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNL 651
            LR L    C  L + P+ V  + +L E   +   ++  V +SI  L KL++LN   CK L
Sbjct: 636  LRILNFDRCEGLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRL 694

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP------HSTSWY 705
               P   I L SL+ LNLS C+ LE+ P+ LG++E++ +L +S +++        + +  
Sbjct: 695  RSFPP--IKLTSLEKLNLSFCYSLESFPKILGKMENIRQLCLSESSITELPFSFQNLAGL 752

Query: 706  SYIPINLMRKSVALKLPS---------------LSGLCSLR-----------------KL 733
              + +  +      K+PS               L G   L+                 +L
Sbjct: 753  QALELRFLSPHAIFKVPSSIVLMPELTEIFVVGLKGWQWLKQEEGEEKTGSIVSSKVVRL 812

Query: 734  NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
             +  CNL +     D      +KEL LS+N+F  LP  I     L  +++ DCK L+ + 
Sbjct: 813  TVAICNLSDEFFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRILDVCDCKHLREIR 872

Query: 794  QLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAV 853
             +PPN++      C                               KSL  S +R++L   
Sbjct: 873  GIPPNLKHFFAINC-------------------------------KSLTSSSIRKFLNQE 901

Query: 854  SNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS-- 911
             +   +    +PG  IPEWF  Q+ G SI+       + + K     +C +   +++   
Sbjct: 902  LHEAGNTVFCLPGKRIPEWFDQQSRGPSIS------FWFRNKFPDMVLCLIVAPIRSQFF 955

Query: 912  ------RGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLS----RQTCY 961
                   GN C         +C+               Q G  H +L  L     R + Y
Sbjct: 956  RPEVFINGNEC------SPYSCYF--------------QKGMHHAYLCDLREIKFRNSPY 995

Query: 962  DIRLPLESNLEPFES--NHVNVS 982
            ++         PFE+  NHVNV+
Sbjct: 996  EV---------PFENGWNHVNVT 1009


>gi|295083307|gb|ADF78107.1| Rj2 protein [Glycine max]
 gi|295083315|gb|ADF78111.1| Rj2 protein [Glycine max]
 gi|295083317|gb|ADF78112.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 234/589 (39%), Positives = 343/589 (58%), Gaps = 36/589 (6%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR  ++  L+D  S D V MIGI G+GG+GK+T+A  VY+LI+  F+ S FL ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  LL ++L   + ++ +V  G  ++  RLQRKKVLL++DDV   +QLQ++
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G   WFG GSR+IIT+RD+ LL +HGV   Y+   LN + ALQL   K+FKT +     
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            ++   ++ YA GLPLALEV+GS L G+S++EW+S +++ +  P  +IL+IL++SFD L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNN------TL 292
           E +K +FLDIAC F   D   V + L    G      I VL+EK LI    +       +
Sbjct: 432 EEQKNVFLDIACCFNRYDLTEVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPIV 491

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD-NYHHEN 351
            MHDL++++G++IV+++SP+E  KRSRLW  E++ HVL ++ GT  +E I LD     + 
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKE 551

Query: 352 EVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           E+ +  + KAF KM NL+ L I N +   G +YL N LR+L W  YP   LPS+    K 
Sbjct: 552 EIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPNNLRVLEWWRYPSHCLPSDFHPKKL 611

Query: 412 IEIYMCYSRIGE-----LWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
               + +S I       LWK   +   L+++     E L ++PD +G PNLE+   E C 
Sbjct: 612 AICKLPFSCISSFELDGLWKMFVN---LRILNFDRCEGLTQIPDVSGLPNLEEFSFECCF 668

Query: 467 RLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLD 526
            L  +H S+   +KL ILN   C  L + P  I + SLEKLNL           C S   
Sbjct: 669 NLITVHNSIGFLDKLKILNAFRCKRLRSFP-PIKLTSLEKLNLSF---------CYS--- 715

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLK 575
                    FP+I+  ME++ +L L  ++I  LP S + L+GL  L L+
Sbjct: 716 ------LESFPKILGKMENIRQLCLSESSITELPFSFQNLAGLQALELR 758



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 173/443 (39%), Gaps = 122/443 (27%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNL 651
            LR L    C  L + P+ V  + +L E   +   ++  V +SI  L KL++LN   CK L
Sbjct: 636  LRILNFDRCEGLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRL 694

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP------HSTSWY 705
               P   I L SL+ LNLS C+ LE+ P+ LG++E++ +L +S +++        + +  
Sbjct: 695  RSFPP--IKLTSLEKLNLSFCYSLESFPKILGKMENIRQLCLSESSITELPFSFQNLAGL 752

Query: 706  SYIPINLMRKSVALKLPS---------------LSGLCSLR-----------------KL 733
              + +  +      K+PS               L G   L+                 +L
Sbjct: 753  QALELRFLSPHAIFKVPSSIVLMPELTEIFVVGLKGWQWLKQEEGEEKTGSIVSSKVVRL 812

Query: 734  NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
             +  CNL +     D      +KEL LS+N+F  LP  I     L  +++ DCK L+ + 
Sbjct: 813  TVAICNLSDEFFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRILDVCDCKHLREIR 872

Query: 794  QLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAV 853
             +PPN++      C                               KSL  S +R++L   
Sbjct: 873  GIPPNLKHFFAINC-------------------------------KSLTSSSIRKFLNQE 901

Query: 854  SNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS-- 911
             +   +    +PG  IPEWF  Q+ G SI+       + + K     +C +   +++   
Sbjct: 902  LHEAGNTVFCLPGKRIPEWFDQQSRGPSIS------FWFRNKFPDMVLCLIVAPIRSQFF 955

Query: 912  ------RGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLS----RQTCY 961
                   GN C         +C+               Q G  H +L  L     R + Y
Sbjct: 956  RPEVFINGNEC------SPYSCYF--------------QKGMHHAYLCDLREIEFRNSPY 995

Query: 962  DIRLPLESNLEPFES--NHVNVS 982
            ++         PFE+  NHVNV+
Sbjct: 996  EV---------PFENGWNHVNVT 1009


>gi|295083303|gb|ADF78105.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 234/589 (39%), Positives = 343/589 (58%), Gaps = 36/589 (6%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR  ++  L+D  S D V MIGI G+GG+GK+T+A  VY+LI+  F+ S FL ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  LL ++L   + ++ +V  G  ++  RLQRKKVLL++DDV   +QLQ++
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G   WFG GSR+IIT+RD+ LL +HGV   Y+   LN + ALQL   K+FKT +     
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            ++   ++ YA GLPLALEV+GS L G+S++EW+S +++ +  P  +IL+IL++SFD L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNN------TL 292
           E +K +FLDIAC F   D   V + L    G      I VL+EK LI    +       +
Sbjct: 432 EEQKNVFLDIACCFNRYDLTEVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPIV 491

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD-NYHHEN 351
            MHDL++++G++IV+++SP+E  KRSRLW  E++ HVL ++ GT  +E I LD     + 
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKE 551

Query: 352 EVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           E+ +  + KAF KM NL+ L I N +   G +YL N LR+L W  YP   LPS+    K 
Sbjct: 552 EIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPNNLRVLEWWRYPSHCLPSDFHPKKL 611

Query: 412 IEIYMCYSRIGE-----LWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
               + +S I       LWK   +   L+++     E L ++PD +G PNLE+   E C 
Sbjct: 612 AICKLPFSCISSFELDGLWKMFVN---LRILNFDRCEGLTQIPDVSGLPNLEEFSFECCF 668

Query: 467 RLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLD 526
            L  +H S+   +KL ILN   C  L + P  I + SLEKLNL           C S   
Sbjct: 669 NLITVHNSIGFLDKLKILNAFRCKRLRSFP-PIKLTSLEKLNLSF---------CYS--- 715

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLK 575
                    FP+I+  ME++ +L L  ++I  LP S + L+GL  L L+
Sbjct: 716 ------LESFPKILGKMENIRQLCLSESSITELPFSFQNLAGLQALELR 758



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 107/443 (24%), Positives = 171/443 (38%), Gaps = 122/443 (27%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNL 651
            LR L    C  L + P+ V  + +L E   +   ++  V +SI  L KL++LN   CK L
Sbjct: 636  LRILNFDRCEGLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRL 694

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP------HSTSWY 705
               P   I L SL+ LNLS C+ LE+ P+ LG++E++ +L +S +++        + +  
Sbjct: 695  RSFPP--IKLTSLEKLNLSFCYSLESFPKILGKMENIRQLCLSESSITELPFSFQNLAGL 752

Query: 706  SYIPINLMRKSVALKLPS---------------LSGLCSLR-----------------KL 733
              + +  +      K+PS               L G   L+                 +L
Sbjct: 753  QALELRFLSPHAIFKVPSSIVLMPELTEIFVVGLKGWQWLKQEEGEEKTGSIVSSKVVRL 812

Query: 734  NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
             +  CNL +     D      +KEL LS+N+F  LP  I     L  +++ DCK L+ + 
Sbjct: 813  TVAICNLSDEFFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRILDVCDCKHLREIR 872

Query: 794  QLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAV 853
             +PPN++      C SL +                           S     L + L   
Sbjct: 873  GIPPNLKHFFAINCKSLTS---------------------------SSISKFLNQELHEA 905

Query: 854  SNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS-- 911
             NT       +PG  IPEWF  Q+ G SI+       + + K     +C +   +++   
Sbjct: 906  GNT----VFCLPGKRIPEWFDQQSRGPSIS------FWFRNKFPDMVLCLIVAPIRSQFF 955

Query: 912  ------RGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLS----RQTCY 961
                   GN C         +C+               Q G  H +L  L     R + Y
Sbjct: 956  RPEVFINGNEC------SPYSCYF--------------QKGMHHAYLCDLREIEFRNSPY 995

Query: 962  DIRLPLESNLEPFES--NHVNVS 982
            ++         PFE+  NHVNV+
Sbjct: 996  EV---------PFENGWNHVNVT 1009


>gi|145337463|ref|NP_177427.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|110737528|dbj|BAF00706.1| hypothetical protein [Arabidopsis thaliana]
 gi|332197259|gb|AEE35380.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1042

 Score =  340 bits (873), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 289/836 (34%), Positives = 433/836 (51%), Gaps = 58/836 (6%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           M++   K+  L++ G  D V MIGI GMGG+GK+TIA+ +YD  S +F A  FL+NV   
Sbjct: 193 MEAHMMKMTLLLNIGCEDEVHMIGIWGMGGIGKSTIAKCLYDRFSRQFPAHCFLENV--- 249

Query: 60  SSKG-GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            SKG  +  LQ++LLS +L   D  +W++  G   +  RL  +KV +V+D+V  V+QL  
Sbjct: 250 -SKGYDIKHLQKELLSHILYDEDVELWSMEAGSQEIKERLGHQKVFVVLDNVDKVEQLHG 308

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           LA +  WFG GSRIIIT+RD+ LL + GV+ +Y+   L+  +ALQ+F   AF    P   
Sbjct: 309 LAKDPSWFGPGSRIIITTRDKGLLNSCGVNNIYEVKCLDDKDALQVFKKLAFGGRPPSDG 368

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSG-RSVDEWRSTLERLEIEPPSEILDILQISFDG 237
             QL  R  R A GLP AL    S LS   ++DEW   L  LE  P   + +IL+ S+DG
Sbjct: 369 FEQLFIRASRLAHGLPSALVAFASHLSAIVAIDEWEDELALLETFPQKNVQEILRASYDG 428

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHD 296
           L + +K +FL +ACFF G    Y+  FL+ C       I  L  KCL+ +  +  + MH 
Sbjct: 429 LDQYDKTVFLHVACFFNGGHLRYIRAFLKNCDAR----INHLAAKCLVNISIDGCISMHI 484

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL + G++IV+++S     K+  LW   E+ +VL  +TGT  VEG+ L      + + L 
Sbjct: 485 LLVQTGREIVRQESDWRPSKQRFLWDPTEIHYVLDSNTGTRRVEGLSLHLCEMADTLLLR 544

Query: 357 ASAKAFSKMTNLRLLK--------ICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQM 408
            S   F  M NL  LK        + NLQL +    LS  L+LL W  YPL  LP   + 
Sbjct: 545 NS--VFGPMHNLTFLKFFQHLGGNVSNLQLISDDYVLSRNLKLLHWDAYPLTILPPIFRP 602

Query: 409 DKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
              IE+ + YS++  LW G K L  L+++ ++ S NL  +P+ + A NLE+LILE CT L
Sbjct: 603 HTIIELSLRYSKLNSLWDGTKLLPNLRILDVTGSRNLRELPELSTAVNLEELILESCTSL 662

Query: 469 YEIHPSLLLHNKLII--LNMKDCTSL--ITLPGKILMKSLEKLNLK----SLPTTISGLK 520
            +I  S+   N+L +  LNM  C  L  + L   +   SL +  LK    +LP + + L 
Sbjct: 663 VQIPESI---NRLYLRKLNMMYCDGLEGVILVNDLQEASLSRWGLKRIILNLPHSGATLS 719

Query: 521 CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLP-LSIELLSGLVLLNLKNCRS 579
            L+ L + G + F +   +    +HLS   ++ TA + +  L      GL  L++K   S
Sbjct: 720 SLTDLAIQGKI-FIKLSGLSGTGDHLSFSSVQKTAHQSVTHLLNSGFFGLKSLDIKRF-S 777

Query: 580 LEILPVTVS-----NLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSI 634
             + PV  S     +  CL  LKL   + ++  PE +  ++ L  L L G     +P+S+
Sbjct: 778 YRLDPVNFSCLSFADFPCLTELKLINLN-IEDIPEDICQLQLLETLDLGGNDFVYLPTSM 836

Query: 635 ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
             L  L+ L+LS+C+ L  LP     L  ++ L LSGC KL ++   LG        ++ 
Sbjct: 837 GQLAMLKYLSLSNCRRLKALPQ----LSQVERLVLSGCVKLGSLMGILGA----GRYNLL 888

Query: 695 GTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCS 754
              V    S  S + I  + KS         G   L +L+L +C  +  +L  ++ +   
Sbjct: 889 DFCVEKCKSLGSLMGILSVEKSAP-------GRNELLELSLENCKSLV-SLSEELSHFTK 940

Query: 755 LKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
           L  L LS   F  +PTSI  LS +  + L +C ++ SL  LP +++ +  +GC SL
Sbjct: 941 LTYLDLSSLEFRRIPTSIRELSFMRTLYLNNCNKIFSLTDLPESLKYLYAHGCESL 996


>gi|357499513|ref|XP_003620045.1| Resistance protein [Medicago truncatula]
 gi|355495060|gb|AES76263.1| Resistance protein [Medicago truncatula]
          Length = 894

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 233/663 (35%), Positives = 369/663 (55%), Gaps = 57/663 (8%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + S+ ++++ L+D  S D V M+G+ G GGLGK+T+A+ +Y+ I+ +FE S FL+NVRE 
Sbjct: 200 LQSQVQEVKSLLDERSDDGVHMVGLYGTGGLGKSTLAKAIYNFIADQFECSCFLENVREN 259

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+   L  LQ +LL + L+L +     V +GI  +  RL RKKVLL++DDV ++KQL +L
Sbjct: 260 STSNKLKHLQEELLLKTLQL-EIKFGGVSEGIPYIKERLHRKKVLLILDDVDNMKQLHAL 318

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG GS++II +RD+HLL  HG+  ++K  GL   EAL+L    AFK+       
Sbjct: 319 AGGPDWFGRGSKVIIATRDKHLLTCHGIKSMHKVEGLYGTEALELLRWMAFKSDNVPSGY 378

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            ++  R + YA GLPL +E++GS L G++++EW+ TL+  +  P  EI  IL++S+D L+
Sbjct: 379 EEILNRAVAYASGLPLVIEIVGSNLFGKNIEEWKYTLDGYDRIPNKEIQKILKVSYDSLE 438

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVI-GIRVLIEKCLITV---HNNTLWMH 295
           E E+ +FLDIAC FKG + +     L     H +   + VL EK LI     + + + +H
Sbjct: 439 EEEQSVFLDIACCFKGYNWEDAKYTLHSHYGHSITHHLGVLAEKSLIDQYWEYRDYVMLH 498

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DL++++G+++V+++S +E G+RSRL  ++++  VL E+TGT  +E I ++   H  E  +
Sbjct: 499 DLIEDMGKEVVRQESIKEPGERSRLCCQDDIVRVLRENTGTSKIEMIYMN--LHSMESVI 556

Query: 356 CASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
               KAF KMT L+ L I N     GL+YL + LR+L W+G   K L SN+   K     
Sbjct: 557 DKKGKAFKKMTKLKTLIIENGHFSGGLKYLPSSLRVLKWKGCLSKCLSSNILNKK----- 611

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
                             +KV+ L++ E L  +PD +G  NLEKL    C  L  IH S+
Sbjct: 612 ---------------FQNMKVLTLNYCEYLTHIPDVSGLSNLEKLSFTCCDNLITIHNSI 656

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
              NKL  L+   C  L   P  + + SL+KLNL       SG + L +           
Sbjct: 657 GHLNKLEWLSAYGCRKLERFP-PLGLASLKKLNL-------SGCESLDS----------- 697

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNC------RSLEILPVTVSN 589
           FPE++  M  +  + L  T+IR LP S + LS L  L++ N       ++ ++  +  SN
Sbjct: 698 FPELLCKMTKIDNILLISTSIRELPFSFQNLSELQELSVANGTLRFPKQNDKMYSIVFSN 757

Query: 590 LKCLRSLKLSGCSKLKK-FPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDC 648
           +     L L  C+   +  P +++   +++ L L  ++ K +P  +     L L+ + DC
Sbjct: 758 MT---ELTLMDCNLSDECLPILLKWFVNVTCLDLSYSNFKILPECLSECHHLVLITVRDC 814

Query: 649 KNL 651
           ++L
Sbjct: 815 ESL 817



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 131/271 (48%), Gaps = 26/271 (9%)

Query: 550 HLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPE 609
           H  G  ++ LP S+ +L     L+   C S  IL     N+K L    L+ C  L   P+
Sbjct: 578 HFSG-GLKYLPSSLRVLKWKGCLS--KCLSSNILNKKFQNMKVL---TLNYCEYLTHIPD 631

Query: 610 IVRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
            V  + +L +L F    ++  + +SI  L KLE L+   C+ L R P   + L SLK LN
Sbjct: 632 -VSGLSNLEKLSFTCCDNLITIHNSIGHLNKLEWLSAYGCRKLERFPP--LGLASLKKLN 688

Query: 669 LSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYIPINLMRKSVA---LKLP 722
           LSGC  L++ PE L ++  ++ + +  T++   P S    S     L   SVA   L+ P
Sbjct: 689 LSGCESLDSFPELLCKMTKIDNILLISTSIRELPFSFQNLS----ELQELSVANGTLRFP 744

Query: 723 SLSG------LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLS 776
             +         ++ +L L DCNL +  LP  +    ++  L LS ++F  LP  ++   
Sbjct: 745 KQNDKMYSIVFSNMTELTLMDCNLSDECLPILLKWFVNVTCLDLSYSNFKILPECLSECH 804

Query: 777 KLLNIELEDCKRLQSLPQLPPNIRQVRVNGC 807
            L+ I + DC+ L+ +  +PPN++ +  + C
Sbjct: 805 HLVLITVRDCESLEEIRGIPPNLKWLSASEC 835


>gi|297794611|ref|XP_002865190.1| hypothetical protein ARALYDRAFT_494325 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297311025|gb|EFH41449.1| hypothetical protein ARALYDRAFT_494325 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1127

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 254/705 (36%), Positives = 383/705 (54%), Gaps = 58/705 (8%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV-----REISSKGGLVS--- 67
           S +VRM+GI G  G+GKTTIAR ++  +S +F++S F+D V      E+ S   LV    
Sbjct: 205 SEEVRMVGIWGPSGIGKTTIARALFSQLSCQFQSSVFIDRVFISKSMEVYSGANLVDYNM 264

Query: 68  ---LQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNRE 124
              LQR  L++     D  I    D I  + + ++ +K L+VIDD+ D   L +LAG  +
Sbjct: 265 KLHLQRAFLAEFFDKKDIKI----DHIGAMENMVKHRKALIVIDDLDDQDVLDALAGRTQ 320

Query: 125 WFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSA 184
           WFGSGSRII+ +R++H L+ +G+D +YK    +   AL++F   AF+   P    ++LS+
Sbjct: 321 WFGSGSRIIVVTRNKHFLRANGIDHIYKVCLPSNALALEMFCRSAFRKSSPPDGFMELSS 380

Query: 185 RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQEL-EK 243
            +   AG LPL L VLGS L GR    W   L RL+     +I   L++S+DGL    ++
Sbjct: 381 EVALRAGNLPLGLNVLGSNLRGRDKGYWIDMLPRLQ-GLDGKIGKTLRVSYDGLNNRKDE 439

Query: 244 KIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQ 303
            IF  IAC F G     +   L        IG++ L+++ LI    NT+ MH LLQE+G+
Sbjct: 440 AIFRHIACIFNGEKVSDIKLLLANSNLDVNIGLKNLVDRSLICERFNTVEMHSLLQEMGK 499

Query: 304 QIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFS 363
           +IV+ QS +E G+R  L   +++C VL ++ GT+ V GI LD     +E+++  S+  F 
Sbjct: 500 EIVRTQS-DEPGEREFLVDLKDICDVLEDNAGTKKVLGITLD-IDETDELHIHESS--FK 555

Query: 364 KMTNLRLLKI----------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
            M NL  LKI              LP    YL ++LRLL +  YPLK LPSN   +  ++
Sbjct: 556 GMHNLLFLKIYTKKLDQKKEVRWHLPERFNYLPSKLRLLRFDRYPLKRLPSNFHPENLVK 615

Query: 414 IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
           + M  S++ +LW+G+  L  L+ M L  S+NL  +PD + A NLE L L  C+ L E+  
Sbjct: 616 LQMQQSKLEKLWEGVHSLAGLRNMDLRGSKNLKEIPDLSMATNLETLKLSSCSSLVELPS 675

Query: 474 SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK---------SLPTTISGLKCLST 524
           S+   NKL  L++  C  L T+P  + +KSL +LNL           + T IS L    T
Sbjct: 676 SIQYLNKLNDLDISYCDHLETIPTGVNLKSLYRLNLSGCSRLKSFLDISTNISWLDIDQT 735

Query: 525 LDVSGDLKFREFPEIV--EHMEHLSEL--HLEGTAIR----------GLPLSIELLSGLV 570
            ++  +L+ +   E++  E ++  + L   L  T  R           +P SI+ L+ L 
Sbjct: 736 AEIPSNLRLQNLDELILCERVQLRTPLMTMLSPTLTRLTFSNNQSLVEVPSSIQNLNQLE 795

Query: 571 LLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEV 630
            L + NCR+L  LP  + NL+ L +L LS CS+L+ FP+I  ++ DL    L  T+I+EV
Sbjct: 796 HLEIMNCRNLVTLPTGI-NLESLIALDLSHCSQLRTFPDISTNISDLK---LSYTAIEEV 851

Query: 631 PSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
           P  IE L+ L  L+++ C NL+R+  +I  LK L+  + S C  L
Sbjct: 852 PLWIEKLSLLCNLDMNGCSNLLRVSPNISKLKHLEGADFSDCVAL 896



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 128/524 (24%), Positives = 230/524 (43%), Gaps = 91/524 (17%)

Query: 542  HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
            H E+L +L ++ + +  L   +  L+GL  ++L+  ++L+ +P  +S    L +LKLS C
Sbjct: 609  HPENLVKLQMQQSKLEKLWEGVHSLAGLRNMDLRGSKNLKEIP-DLSMATNLETLKLSSC 667

Query: 602  SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
            S                       S+ E+PSSI+ L KL  L++S C +L  +P+ +  L
Sbjct: 668  S-----------------------SLVELPSSIQYLNKLNDLDISYCDHLETIPTGV-NL 703

Query: 662  KSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKL 721
            KSL  LNLSGC +L++    L    ++  LDI  TA   S      +   ++ + V L+ 
Sbjct: 704  KSLYRLNLSGCSRLKSF---LDISTNISWLDIDQTAEIPSNLRLQNLDELILCERVQLRT 760

Query: 722  PSLSGLC-SLRKLNLTDCNLMEGALPSDIGNLCSLKEL-YLSKNSFVSLPTSITHLSKLL 779
            P ++ L  +L +L  ++ N     +PS I NL  L+ L  ++  + V+LPT I +L  L+
Sbjct: 761  PLMTMLSPTLTRLTFSN-NQSLVEVPSSIQNLNQLEHLEIMNCRNLVTLPTGI-NLESLI 818

Query: 780  NIELEDCKRLQSLPQLPPNIRQVR-----------------------VNGCASLVTL--- 813
             ++L  C +L++ P +  NI  ++                       +NGC++L+ +   
Sbjct: 819  ALDLSHCSQLRTFPDISTNISDLKLSYTAIEEVPLWIEKLSLLCNLDMNGCSNLLRVSPN 878

Query: 814  LDALK-LCKSDSTMIACLDSLKLLGNKS-LAFSMLREYLEAV----------------SN 855
            +  LK L  +D +    L      G+ S +A  +  +Y   V                 N
Sbjct: 879  ISKLKHLEGADFSDCVALTEASWNGSSSEMAKFLPPDYFSTVKLNFINCFNLDLKALIQN 938

Query: 856  TRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNN 915
                + +++ G E+P +F ++  GSSI++   S     +    +  C V  V   S  + 
Sbjct: 939  QTFSMQLILSGEEVPSYFAHRTTGSSISLPHISVC---QSFFSFRGCTVIDVESFSTISV 995

Query: 916  CFGSYPTHQLNCHIGHGIYGIGFRDKFGQAG-SDHLWLLYLSRQTCYDIRLPLESNLE-P 973
             F      +    +G+ +    F   F       HL +       C+ +     + L+  
Sbjct: 996  SFDIEVCCRFIDKLGNHVDSTDFPGYFRTTNLGAHLVIF----DCCFPLNEDTTTFLDGQ 1051

Query: 974  FESNHVNVSFEPWLGQG-LEVKMCGLHPVYMDEVEELDQTTNQP 1016
            F  +H+++ F    G   L++K CG+  +  ++V  LD   NQP
Sbjct: 1052 FNYDHMDIQFRLTNGNSQLKLKGCGI--LLSEDVPSLD---NQP 1090


>gi|295083305|gb|ADF78106.1| rj2 protein [Glycine max]
          Length = 1052

 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 234/588 (39%), Positives = 342/588 (58%), Gaps = 36/588 (6%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR  ++  L+D  S D V MIGI G+GG+GK+T+A  VY+LI+  F+ S FL ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  LL ++L   + ++ +V  G  ++  RLQRKKVLL++DDV   +QLQ++
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G   WFG GSR+IIT+RD+ LL +HGV   Y+   LN + ALQL   K+FKT +     
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            ++   ++ YA GLPLALEV+GS L G+S++EW+S +++ +  P  +IL+IL++SFD L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNN------TL 292
           E +K +FLDIAC F   D   V + L    G      I VL+EK LI    +       +
Sbjct: 432 EEQKNVFLDIACCFNRYDLTKVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPRV 491

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD-NYHHEN 351
            MHDL++++G++IV+++SP+E  KRSRLW  E++ HVL ++ GT  +E I LD     + 
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKE 551

Query: 352 EVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           E+ +  + KAF KM NL+ L I N +   G +YL N LR+L W  YP   LPS+    K 
Sbjct: 552 EIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPNNLRVLEWWRYPSHCLPSDFHPKKL 611

Query: 412 IEIYMCYSRIGE-----LWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
               + +S I       LWK   +   L+++     E L ++PD +G PNLE+   E C 
Sbjct: 612 AICKLPFSCISSFELDGLWKMFVN---LRILNFDRCEGLTQIPDVSGLPNLEEFSFECCF 668

Query: 467 RLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLD 526
            L  +H S+   +KL ILN   C  L + P  I + SLEKLNL           C S   
Sbjct: 669 NLITVHNSIGFLDKLKILNAFRCKRLRSFP-PIKLTSLEKLNLSF---------CYS--- 715

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL 574
                    FP+I+  ME++ EL L  ++I  L  S + L+GL  L+L
Sbjct: 716 ------LESFPKILGKMENIRELCLSNSSITELSFSFQNLAGLQALDL 757



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 108/443 (24%), Positives = 172/443 (38%), Gaps = 122/443 (27%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNL 651
            LR L    C  L + P+ V  + +L E   +   ++  V +SI  L KL++LN   CK L
Sbjct: 636  LRILNFDRCEGLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRL 694

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP------HSTSWY 705
               P   I L SL+ LNLS C+ LE+ P+ LG++E++ EL +S +++        + +  
Sbjct: 695  RSFPP--IKLTSLEKLNLSFCYSLESFPKILGKMENIRELCLSNSSITELSFSFQNLAGL 752

Query: 706  SYIPINLMRKSVALKLPS---------------LSGLCSLR-----------------KL 733
              + ++ +      K+PS               L G   L+                 +L
Sbjct: 753  QALDLSFLSPHAIFKVPSSIVLMPELTEIFVVGLKGWQWLKQEEGEEKTGSIVSSKVVRL 812

Query: 734  NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
             +  CNL +     D      +KEL LS+N+F  LP  I     L  +++ DCK L+ + 
Sbjct: 813  TVAICNLSDEFFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRILDVCDCKHLREIR 872

Query: 794  QLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAV 853
             +PPN++      C SL +                           S     L + L   
Sbjct: 873  GIPPNLKHFFAINCKSLTS---------------------------SSISKFLNQELHEA 905

Query: 854  SNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS-- 911
             NT       +PG  IPEWF  Q+ G SI+       + + K     +C +   +++   
Sbjct: 906  GNT----VFCLPGKRIPEWFDQQSRGPSIS------FWFRNKFPDMVLCLIVAPIRSQFF 955

Query: 912  ------RGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLS----RQTCY 961
                   GN C         +C+               Q G  H +L  L     R + Y
Sbjct: 956  RPEVFINGNEC------SPYSCYF--------------QKGMHHAYLCDLREIEFRNSPY 995

Query: 962  DIRLPLESNLEPFES--NHVNVS 982
            ++         PFE+  NHVNV+
Sbjct: 996  EV---------PFENGWNHVNVT 1009


>gi|224126759|ref|XP_002329466.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870146|gb|EEF07277.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 515

 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 171/333 (51%), Positives = 241/333 (72%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D R E+L  +++ GSS+V M+GICG+GG GKTT+A+ VY+LI+++FEA  FL NVRE S
Sbjct: 178 LDQRIEELIHMLNIGSSNVCMVGICGLGGSGKTTVAKAVYNLINNQFEACCFLSNVREFS 237

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            + GLV LQ +LL ++L      + +V  GI+++  RL+ KKVL+VIDDV  + QL+ +A
Sbjct: 238 KRYGLVHLQEKLLFEILGDKTLVLGSVDRGINVIKDRLRHKKVLIVIDDVDHLDQLKQIA 297

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G R+WFG GS+IIIT+RDE LL  HGV+ + +   L  D+AL LF   AF+   P  + +
Sbjct: 298 GERDWFGLGSKIIITTRDERLLVFHGVERLLRVKELCCDDALMLFCWHAFRNSHPPIDYL 357

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           ++S ++++Y+ GLPLAL VLGSFL GRS+ E  S L++L   P  +I ++L+ISFDGL+ 
Sbjct: 358 EISDQVVKYSKGLPLALVVLGSFLYGRSIPERESELDKLRRIPNKQIYEVLKISFDGLEH 417

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            E+ IFLDIACFFKG ++DYV   L+ C F PVIGI+VL+EK L+ + NN L MHDLLQ 
Sbjct: 418 HERAIFLDIACFFKGQEKDYVIKILDACDFDPVIGIQVLMEKSLVYIENNKLQMHDLLQW 477

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTES 333
           +G+Q+V ++SP   G+RSRLW  E++ HVLTE+
Sbjct: 478 MGRQVVHQESPNVPGRRSRLWFHEDILHVLTEN 510


>gi|334183877|ref|NP_001185386.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332197260|gb|AEE35381.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1183

 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 289/836 (34%), Positives = 433/836 (51%), Gaps = 58/836 (6%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           M++   K+  L++ G  D V MIGI GMGG+GK+TIA+ +YD  S +F A  FL+NV   
Sbjct: 193 MEAHMMKMTLLLNIGCEDEVHMIGIWGMGGIGKSTIAKCLYDRFSRQFPAHCFLENV--- 249

Query: 60  SSKG-GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            SKG  +  LQ++LLS +L   D  +W++  G   +  RL  +KV +V+D+V  V+QL  
Sbjct: 250 -SKGYDIKHLQKELLSHILYDEDVELWSMEAGSQEIKERLGHQKVFVVLDNVDKVEQLHG 308

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           LA +  WFG GSRIIIT+RD+ LL + GV+ +Y+   L+  +ALQ+F   AF    P   
Sbjct: 309 LAKDPSWFGPGSRIIITTRDKGLLNSCGVNNIYEVKCLDDKDALQVFKKLAFGGRPPSDG 368

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSG-RSVDEWRSTLERLEIEPPSEILDILQISFDG 237
             QL  R  R A GLP AL    S LS   ++DEW   L  LE  P   + +IL+ S+DG
Sbjct: 369 FEQLFIRASRLAHGLPSALVAFASHLSAIVAIDEWEDELALLETFPQKNVQEILRASYDG 428

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHD 296
           L + +K +FL +ACFF G    Y+  FL+ C       I  L  KCL+ +  +  + MH 
Sbjct: 429 LDQYDKTVFLHVACFFNGGHLRYIRAFLKNCDAR----INHLAAKCLVNISIDGCISMHI 484

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL + G++IV+++S     K+  LW   E+ +VL  +TGT  VEG+ L      + + L 
Sbjct: 485 LLVQTGREIVRQESDWRPSKQRFLWDPTEIHYVLDSNTGTRRVEGLSLHLCEMADTLLLR 544

Query: 357 ASAKAFSKMTNLRLLK--------ICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQM 408
            S   F  M NL  LK        + NLQL +    LS  L+LL W  YPL  LP   + 
Sbjct: 545 NS--VFGPMHNLTFLKFFQHLGGNVSNLQLISDDYVLSRNLKLLHWDAYPLTILPPIFRP 602

Query: 409 DKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
              IE+ + YS++  LW G K L  L+++ ++ S NL  +P+ + A NLE+LILE CT L
Sbjct: 603 HTIIELSLRYSKLNSLWDGTKLLPNLRILDVTGSRNLRELPELSTAVNLEELILESCTSL 662

Query: 469 YEIHPSLLLHNKLII--LNMKDCTSL--ITLPGKILMKSLEKLNLK----SLPTTISGLK 520
            +I  S+   N+L +  LNM  C  L  + L   +   SL +  LK    +LP + + L 
Sbjct: 663 VQIPESI---NRLYLRKLNMMYCDGLEGVILVNDLQEASLSRWGLKRIILNLPHSGATLS 719

Query: 521 CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLP-LSIELLSGLVLLNLKNCRS 579
            L+ L + G + F +   +    +HLS   ++ TA + +  L      GL  L++K   S
Sbjct: 720 SLTDLAIQGKI-FIKLSGLSGTGDHLSFSSVQKTAHQSVTHLLNSGFFGLKSLDIKRF-S 777

Query: 580 LEILPVTVS-----NLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSI 634
             + PV  S     +  CL  LKL   + ++  PE +  ++ L  L L G     +P+S+
Sbjct: 778 YRLDPVNFSCLSFADFPCLTELKLINLN-IEDIPEDICQLQLLETLDLGGNDFVYLPTSM 836

Query: 635 ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
             L  L+ L+LS+C+ L  LP     L  ++ L LSGC KL ++   LG        ++ 
Sbjct: 837 GQLAMLKYLSLSNCRRLKALPQ----LSQVERLVLSGCVKLGSLMGILGA----GRYNLL 888

Query: 695 GTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCS 754
              V    S  S + I  + KS         G   L +L+L +C  +  +L  ++ +   
Sbjct: 889 DFCVEKCKSLGSLMGILSVEKSAP-------GRNELLELSLENCKSLV-SLSEELSHFTK 940

Query: 755 LKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
           L  L LS   F  +PTSI  LS +  + L +C ++ SL  LP +++ +  +GC SL
Sbjct: 941 LTYLDLSSLEFRRIPTSIRELSFMRTLYLNNCNKIFSLTDLPESLKYLYAHGCESL 996


>gi|295083329|gb|ADF78118.1| rj2 protein [Glycine max]
 gi|308171408|gb|ADO15998.1| Rj2/Rfg1 protein [Glycine max]
          Length = 1052

 Score =  339 bits (870), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 234/588 (39%), Positives = 342/588 (58%), Gaps = 36/588 (6%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR  ++  L+D  S D V MIGI G+GG+GK+T+A  VY+LI+  F+ S FL ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  LL ++L   + ++ +V  G  ++  RLQRKKVLL++DDV   +QLQ++
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G   WFG GSR+IIT+RD+ LL +HGV   Y+   LN + ALQL   K+FKT +     
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            ++   ++ YA GLPLALEV+GS L G+S++EW+S +++ +  P  +IL+IL++SFD L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNN------TL 292
           E +K +FLDIAC F   D   V + L    G      I VL+EK LI    +       +
Sbjct: 432 EEQKNVFLDIACCFNRYDLTKVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPRV 491

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD-NYHHEN 351
            MHDL++++G++IV+++SP+E  KRSRLW  E++ HVL ++ GT  +E I LD     + 
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIHVLEDNRGTSEIEIICLDFPSFDKE 551

Query: 352 EVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           E+ +  + KAF KM NL+ L I N +   G +YL N LR+L W  YP   LPS+    K 
Sbjct: 552 EIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPNNLRVLEWWRYPSHCLPSDFHPKKL 611

Query: 412 IEIYMCYSRIGE-----LWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
               + +S I       LWK   +   L+++     E L ++PD +G PNLE+   E C 
Sbjct: 612 AICKLPFSCISSFELDGLWKMFVN---LRILNFDRCEGLTQIPDVSGLPNLEEFSFECCF 668

Query: 467 RLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLD 526
            L  +H S+   +KL ILN   C  L + P  I + SLEKLNL           C S   
Sbjct: 669 NLITVHNSIGFLDKLKILNAFRCKRLRSFP-PIKLTSLEKLNLSF---------CYS--- 715

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL 574
                    FP+I+  ME++ EL L  ++I  L  S + L+GL  L+L
Sbjct: 716 ------LESFPKILGKMENIRELCLSNSSITELSFSFQNLAGLQALDL 757



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 107/443 (24%), Positives = 174/443 (39%), Gaps = 122/443 (27%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNL 651
            LR L    C  L + P+ V  + +L E   +   ++  V +SI  L KL++LN   CK L
Sbjct: 636  LRILNFDRCEGLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRL 694

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP------HSTSWY 705
               P   I L SL+ LNLS C+ LE+ P+ LG++E++ EL +S +++        + +  
Sbjct: 695  RSFPP--IKLTSLEKLNLSFCYSLESFPKILGKMENIRELCLSNSSITELSFSFQNLAGL 752

Query: 706  SYIPINLMRKSVALKLPS---------------LSGLCSLR-----------------KL 733
              + ++ +      K+PS               L G   L+                 +L
Sbjct: 753  QALDLSFLSPHAIFKVPSSIVLMPELTEIFVVGLKGWQWLKQEEGEEKTGSIVSSKVVRL 812

Query: 734  NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
             +  CNL +     D      +KEL LS+N+F  LP  I     L  +++ DCK L+ + 
Sbjct: 813  TVAICNLSDEFFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRILDVCDCKHLREIR 872

Query: 794  QLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAV 853
             +PPN++      C                               KSL  S +R++L   
Sbjct: 873  GIPPNLKHFFAINC-------------------------------KSLTSSSIRKFLNQE 901

Query: 854  SNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS-- 911
             +   +    +PG  IPEWF  Q+ G SI+       + + K     +C +   +++   
Sbjct: 902  LHEAGNTVFCLPGKRIPEWFDQQSRGPSIS------FWFRNKFPDMVLCLIVAPIRSQFF 955

Query: 912  ------RGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLS----RQTCY 961
                   GN C         +C+               Q G  H +L  L     R + Y
Sbjct: 956  RPEVFINGNEC------SPYSCYF--------------QKGMHHAYLCDLREIEFRNSPY 995

Query: 962  DIRLPLESNLEPFES--NHVNVS 982
            ++         PFE+  NHVNV+
Sbjct: 996  EV---------PFENGWNHVNVT 1009


>gi|357513721|ref|XP_003627149.1| Disease resistance protein [Medicago truncatula]
 gi|355521171|gb|AET01625.1| Disease resistance protein [Medicago truncatula]
          Length = 1630

 Score =  339 bits (870), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 238/709 (33%), Positives = 377/709 (53%), Gaps = 76/709 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D   E +  L+ +    +  +GI GM G+GKTTIA+ ++      ++   FL+ + E S
Sbjct: 272 VDKNIEHIELLLKT----IPRVGIWGMSGIGKTTIAKQMFAKNFPYYDNVCFLEKINEES 327

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            K G + ++ +LLS+LLK    +  +V      + +RL RKKV +V+DDV +  QL  L 
Sbjct: 328 EKFGQIYVRNKLLSELLK-QKITASDVHGLHTFIKTRLFRKKVFIVLDDVDNATQLDDLC 386

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
                 G  SRIIIT+RD H L +  VDE+Y+       ++L LF+++AFK   PL+   
Sbjct: 387 RVLGDLGPDSRIIITTRDRHTL-SGKVDEIYEVKTWKLKDSLNLFSLRAFKKAHPLKGYE 445

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPS--EILDILQISFDGL 238
           +LS R ++ AGG+PLAL+VLGS    R  + W S L     +  +  EI  +L+ S++GL
Sbjct: 446 RLSERAVKCAGGVPLALQVLGSHFHSREPEFWESELNDYVKKGGAFHEIQKVLRASYNGL 505

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT-LWMHDL 297
              EK++FLDIA FFKG ++D VT  L+  G++   GI++L +K LIT+ NN  + MHDL
Sbjct: 506 SWREKEMFLDIAFFFKGENKDIVTRILDAYGYNATSGIKILEDKALITISNNDRIQMHDL 565

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           LQ++   IV R+   + GK SRL    ++C VL  + G++ +EGI+ D      +V +  
Sbjct: 566 LQKMALDIV-REEYNDRGKCSRLRDATDICDVLGNNKGSDAIEGIIFD---LSQKVDIHV 621

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLS------------NRLRLLGWRGYPLKFLPSN 405
            A  F  MT LR LK     +PNG + L             ++L+ L W GYPLK LP  
Sbjct: 622 QADTFKLMTKLRFLK---FHIPNGKKKLGTVHLPENIMPFFDKLKYLEWNGYPLKSLPEP 678

Query: 406 LQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
              ++ I+I + +S I  LW G++ +  L+V+ LS  +    +PD +GA  L++L L GC
Sbjct: 679 FHAEQLIQICLPHSNIEHLWHGMQEVVNLEVIDLSECKKFRSLPDLSGALKLKQLRLSGC 738

Query: 466 TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTL 525
             L E+ PS    + L  L +  C  L +L G+  + SL+  ++K       G K L   
Sbjct: 739 EELCELQPSAFSKDTLDTLLLDRCIKLESLMGEKHLTSLKYFSVK-------GCKSLKEF 791

Query: 526 DVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPV 585
            +S D               ++ L L  T I+ L  S+  ++ L+ LNL++  +L  LP+
Sbjct: 792 SLSSD--------------SINRLDLSKTGIKILHPSLGDMNNLIWLNLEDL-NLTNLPI 836

Query: 586 TVSNLKCLRSLKLSGCSKLKK--------------------------FPEIVRSMKDLSE 619
            +S+L+ L  L++S C+ + K                           P  + S++ L E
Sbjct: 837 ELSHLRSLTELRVSKCNVVTKSKLEALFDGLTLLRLLHLKDCCNLIELPANISSLESLHE 896

Query: 620 LFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
           L LDG+S++E+P+SI+ L++LE+ +L +C  L  LP   +++K  +  N
Sbjct: 897 LRLDGSSVEELPASIKYLSELEIQSLDNCSKLRCLPELPLSIKEFQADN 945



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 142/540 (26%), Positives = 230/540 (42%), Gaps = 117/540 (21%)

Query: 542  HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
            H E L ++ L  + I  L   ++ +  L +++L  C+    LP     LK L+ L+LSGC
Sbjct: 680  HAEQLIQICLPHSNIEHLWHGMQEVVNLEVIDLSECKKFRSLPDLSGALK-LKQLRLSGC 738

Query: 602  SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV--------- 652
             +L +      S   L  L LD     E     + LT L+  ++  CK+L          
Sbjct: 739  EELCELQPSAFSKDTLDTLLLDRCIKLESLMGEKHLTSLKYFSVKGCKSLKEFSLSSDSI 798

Query: 653  -RLPSSIIALKSLKT----------LNLSGCFKLENVPETLGQIESLEELDISGTAVPHS 701
             RL  S   +K L            LNL     L N+P  L  + SL EL +S       
Sbjct: 799  NRLDLSKTGIKILHPSLGDMNNLIWLNLED-LNLTNLPIELSHLRSLTELRVS------- 850

Query: 702  TSWYSYIPINLMRKSVALKLPSL-SGLCSLRKLNLTDC-NLMEGALPSDIGNLCSLKELY 759
                     N++ KS   KL +L  GL  LR L+L DC NL+E  LP++I +L SL EL 
Sbjct: 851  -------KCNVVTKS---KLEALFDGLTLLRLLHLKDCCNLIE--LPANISSLESLHELR 898

Query: 760  LSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALK- 818
            L  +S   LP SI +LS+L    L++C +L+ LP+LP +I++ + + C SL+T +  LK 
Sbjct: 899  LDGSSVEELPASIKYLSELEIQSLDNCSKLRCLPELPLSIKEFQADNCTSLIT-VSTLKT 957

Query: 819  ------------------LCKSDSTMIACLDSLKLLGNKSLAFS--MLREY-LEAVSNTR 857
                              + + D   + C+    +L  KS AF   ++R+Y  +  S   
Sbjct: 958  FSINMIGQKKYISFKNSIMLELDGPSLDCITEDAVLTMKSAAFHNVLVRKYRFQTHSFNY 1017

Query: 858  QHLSVVVPGSEIPEWFMYQN-EGSSITVTRPSNLYNKKKLVGYAICCVFHVLKN-SRGNN 915
                V +PG  +P  F +++   SSITV            +  ++ C+F V+ + S+   
Sbjct: 1018 NRAEVCLPGRRVPREFKHRSTTSSSITVN-----------ISKSLGCIFAVVVSPSKRTQ 1066

Query: 916  CFGSYPTHQLNCHIGHGIYGIGFRDKFGQA-----GSDHLWLLYLSRQTCYDIRLPLESN 970
              G +   +  C+   G   +G++ K+          DH+++ Y                
Sbjct: 1067 QHGYFVGMRCQCYTEDGSREVGYKSKWDHKPITNLNMDHIFVWY---------------- 1110

Query: 971  LEPFESNHV------NVSF----EPWLGQG------LEVKMCGLHPVYMDEVEELDQTTN 1014
             +P+  + +       +SF    + +   G      L +K CG+ P+Y  E   +  T N
Sbjct: 1111 -DPYHYDSILSSIGRKISFKFCIKTYTSSGRELDGLLSIKECGVCPIYYSESRRVLGTGN 1169


>gi|357499329|ref|XP_003619953.1| Resistance protein [Medicago truncatula]
 gi|355494968|gb|AES76171.1| Resistance protein [Medicago truncatula]
          Length = 1196

 Score =  339 bits (869), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 232/663 (34%), Positives = 353/663 (53%), Gaps = 79/663 (11%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR E+++ L+D  S + V M+G+ G GGLGK+T+A+ +Y+ ++ +FE   FL NVRE 
Sbjct: 201 LESRLEQVKLLLDKESDEGVHMVGLYGTGGLGKSTLAKAIYNFVADQFEGVCFLHNVREN 260

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+   L  LQ++LLS+ +K+ +    ++ +GI ++  RL RKK+LL++DDV  + QL++L
Sbjct: 261 SAHNNLKHLQKELLSKTVKV-NIKFGHICEGIPIIKERLCRKKILLILDDVNQLDQLEAL 319

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG GSR+IIT+RD+HLL  HG++  Y   GL   EAL+L    AFK  +     
Sbjct: 320 AGGLDWFGPGSRVIITTRDKHLLTCHGIERTYAVRGLYGTEALELLRWMAFKNNKVPPSY 379

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R + YA GLPL LE++GS L G+S++EW+ TL+  E  P  +I +IL++S+D L+
Sbjct: 380 EDVLNRAVSYASGLPLVLEIVGSNLYGKSIEEWKGTLDGYEKIPNKKIHEILKVSYDALE 439

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVI-GIRVLIEKCLITVHNNTLWMHDLL 298
           E ++ +FLDIAC FKG   +   + L     H +   + VL EK LI  ++  L +HDL+
Sbjct: 440 EEQQSVFLDIACCFKGCRWEEFEDILRYHYGHCITHHLGVLAEKSLIYQNHGYLRLHDLI 499

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           +++G+++V+++S +E G++SRLW ++E+ HVL E+TGT  +E I ++   H  E  +   
Sbjct: 500 KDMGKEVVRQESRKEPGEQSRLWCQDEIVHVLKENTGTSKIEMIYMN--FHSMESVIDQK 557

Query: 359 AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
            KAF KMT L+ L I N     GL+YL + LR+L W+G                    C 
Sbjct: 558 GKAFKKMTKLKTLIIENGHFSKGLKYLPSSLRVLKWKG--------------------CL 597

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           S         K    +KV+ L+  E L  +PD +   NLEK     C  L  I  S+   
Sbjct: 598 SESLSSSILSKKFQNMKVLTLNCCEYLTHIPDVSDLQNLEKFSFMFCKNLITIDDSIGHL 657

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
           NKL  L+   C+ L   P                P    GL  L  L++SG    + FPE
Sbjct: 658 NKLESLDAGCCSKLKRFP----------------PL---GLTSLKQLELSGCESLKNFPE 698

Query: 539 IVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLN------------------------- 573
           ++  M ++  + L  T+I  LP S   LS L  L+                         
Sbjct: 699 LLCKMRNIKHIFLSRTSIGELPSSFHNLSELRSLHIFGMFRFPKPNDKIYSVVFSNVDHL 758

Query: 574 -LKNC----RSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSI 627
            L+NC     SL I+     NLK L   K    +  K  PE +     L E+ +DG TS+
Sbjct: 759 VLENCNLFDESLLIILKWCVNLKNLVLAK----NNFKILPEFLSECHHLVEIIVDGCTSL 814

Query: 628 KEV 630
           +E+
Sbjct: 815 EEI 817



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 110/216 (50%), Gaps = 11/216 (5%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
           ++ L L+ C  L   P+ V  +++L +  F+   ++  +  SI  L KLE L+   C  L
Sbjct: 613 MKVLTLNCCEYLTHIPD-VSDLQNLEKFSFMFCKNLITIDDSIGHLNKLESLDAGCCSKL 671

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH-STSWYSYIPI 710
            R P   + L SLK L LSGC  L+N PE L ++ +++ + +S T++    +S+++   +
Sbjct: 672 KRFPP--LGLTSLKQLELSGCESLKNFPELLCKMRNIKHIFLSRTSIGELPSSFHNLSEL 729

Query: 711 NLMRKSVALKLPSLSG------LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNS 764
             +      + P  +         ++  L L +CNL + +L   +    +LK L L+KN+
Sbjct: 730 RSLHIFGMFRFPKPNDKIYSVVFSNVDHLVLENCNLFDESLLIILKWCVNLKNLVLAKNN 789

Query: 765 FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIR 800
           F  LP  ++    L+ I ++ C  L+ +  +PPN++
Sbjct: 790 FKILPEFLSECHHLVEIIVDGCTSLEEIRGIPPNLK 825


>gi|10177584|dbj|BAB10815.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1160

 Score =  339 bits (869), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 258/714 (36%), Positives = 383/714 (53%), Gaps = 59/714 (8%)

Query: 7   KLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV-----REISS 61
           K+  L+   S +VRM+GI G  G+GKTTIAR ++  +S +F++S F+D V      E+ S
Sbjct: 196 KMSSLLHLESEEVRMVGIWGPSGIGKTTIARALFSRLSCQFQSSVFIDKVFISKSMEVYS 255

Query: 62  KGGLVS------LQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQ 115
              LV       LQR  L+++    D  I      +  +   ++ +K L+VIDD+ D   
Sbjct: 256 GANLVDYNMKLHLQRAFLAEIFDKKDIKI-----HVGAMEKMVKHRKALIVIDDLDDQDV 310

Query: 116 LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP 175
           L +LA   +WFGSGSRII+ + ++H L+ + +D +YK    +   AL++F   AFK   P
Sbjct: 311 LDALADQTQWFGSGSRIIVVTENKHFLRANRIDHIYKVCLPSNALALEMFCRSAFKKNSP 370

Query: 176 LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
             + ++LS+ +   AG LPL L VLGS L G +   W   L RL+     +I   L++S+
Sbjct: 371 PDDFLELSSEVALRAGNLPLGLNVLGSNLRGINKGYWIDMLPRLQ-GLDGKIGKTLRVSY 429

Query: 236 DGLQEL-EKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
           DGL    ++ IF  IAC F G     +   L        IG++ L+++ LI    NTL M
Sbjct: 430 DGLNNRKDEAIFRHIACIFNGEKVSDIKLLLANSNLDVNIGLKNLVDRSLICERFNTLEM 489

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           H LLQELG++IV+ QS +  G+R  L   +++C VL  +TGT+ V GI LD     +E++
Sbjct: 490 HSLLQELGKEIVRTQSNQP-GEREFLVDLKDICDVLEHNTGTKKVLGITLD-IDETDELH 547

Query: 355 LCASAKAFSKMTNLRLLKI----------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
           +  S+  F  M NL  LKI              LP   +YL +RLRLL +  YP K LPS
Sbjct: 548 IHESS--FKGMHNLLFLKIYTKKLDQKKKVRWHLPERFDYLPSRLRLLRFDRYPSKCLPS 605

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
           N   +  +++ M  S++ +LW G+  L  L+ M L  S NL  +PD + A NLE L L  
Sbjct: 606 NFHPENLVKLQMQQSKLEKLWDGVHSLAGLRNMDLRGSRNLKEIPDLSMATNLETLKLSS 665

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK---------SLPTT 515
           C+ L E+  S+   NKL  L+M  C  L T+P  + +KSL++LNL           +PT 
Sbjct: 666 CSSLVELPSSIQYLNKLNDLDMSYCDHLETIPSGVNLKSLDRLNLSGCSRLKSFLDIPTN 725

Query: 516 ISGLKCLSTLDVSGDLKFREFPEIV--EHMEHLSEL--HLEGTAIR----------GLPL 561
           IS L    T D+  +L+ +   E++  E ++  + L   L  T  R           +P 
Sbjct: 726 ISWLDIGQTADIPSNLRLQNLDELILCERVQLRTPLMTMLSPTLTRLTFSNNPSFVEVPS 785

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
           SI+ L  L  L + NCR+L  LP  + NL  L SL LS CS+LK FP+I  ++ DL+   
Sbjct: 786 SIQNLYQLEHLEIMNCRNLVTLPTGI-NLDSLISLDLSHCSQLKTFPDISTNISDLN--- 841

Query: 622 LDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
           L  T+I+EVP SIE L+ L  L+++ C NL+ +  +I  LK L+  + S C +L
Sbjct: 842 LSYTAIEEVPLSIEKLSLLCYLDMNGCSNLLCVSPNISKLKHLERADFSDCVEL 895



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 165/351 (47%), Gaps = 72/351 (20%)

Query: 602 SKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           SKL+K  + V S+  L  + L G+ ++KE+P  + + T LE L LS C +LV LPSSI  
Sbjct: 620 SKLEKLWDGVHSLAGLRNMDLRGSRNLKEIPD-LSMATNLETLKLSSCSSLVELPSSIQY 678

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA-------VPHSTSWY-----SYI 708
           L  L  L++S C  LE +P  +  ++SL+ L++SG +       +P + SW      + I
Sbjct: 679 LNKLNDLDMSYCDHLETIPSGVN-LKSLDRLNLSGCSRLKSFLDIPTNISWLDIGQTADI 737

Query: 709 PINLMRKS---------VALKLPSLSGLC-SLRKLNLTDCNLMEGALPSDIGNLCSLKEL 758
           P NL  ++         V L+ P ++ L  +L +L  ++ N     +PS I NL  L+ L
Sbjct: 738 PSNLRLQNLDELILCERVQLRTPLMTMLSPTLTRLTFSN-NPSFVEVPSSIQNLYQLEHL 796

Query: 759 -YLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR-------------- 803
             ++  + V+LPT I +L  L++++L  C +L++ P +  NI  +               
Sbjct: 797 EIMNCRNLVTLPTGI-NLDSLISLDLSHCSQLKTFPDISTNISDLNLSYTAIEEVPLSIE 855

Query: 804 ---------VNGCASLV---------------TLLDALKLCK-----SDSTMIACLDSLK 834
                    +NGC++L+                  D ++L +     S S M+  L +  
Sbjct: 856 KLSLLCYLDMNGCSNLLCVSPNISKLKHLERADFSDCVELTEASWNGSSSEMVKLLPADN 915

Query: 835 LLGNKSLAFSMLREYLEA-VSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
               K    +  +  L A + N    + +++ G E+P +F ++  G SI++
Sbjct: 916 FSTVKLNFINCFKLDLTALIQNQTFFMQLILTGEEVPSYFTHRTSGDSISL 966


>gi|42568353|ref|NP_199459.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332008006|gb|AED95389.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1127

 Score =  338 bits (868), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 258/714 (36%), Positives = 383/714 (53%), Gaps = 59/714 (8%)

Query: 7   KLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV-----REISS 61
           K+  L+   S +VRM+GI G  G+GKTTIAR ++  +S +F++S F+D V      E+ S
Sbjct: 196 KMSSLLHLESEEVRMVGIWGPSGIGKTTIARALFSRLSCQFQSSVFIDKVFISKSMEVYS 255

Query: 62  KGGLVS------LQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQ 115
              LV       LQR  L+++    D  I      +  +   ++ +K L+VIDD+ D   
Sbjct: 256 GANLVDYNMKLHLQRAFLAEIFDKKDIKI-----HVGAMEKMVKHRKALIVIDDLDDQDV 310

Query: 116 LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP 175
           L +LA   +WFGSGSRII+ + ++H L+ + +D +YK    +   AL++F   AFK   P
Sbjct: 311 LDALADQTQWFGSGSRIIVVTENKHFLRANRIDHIYKVCLPSNALALEMFCRSAFKKNSP 370

Query: 176 LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
             + ++LS+ +   AG LPL L VLGS L G +   W   L RL+     +I   L++S+
Sbjct: 371 PDDFLELSSEVALRAGNLPLGLNVLGSNLRGINKGYWIDMLPRLQ-GLDGKIGKTLRVSY 429

Query: 236 DGLQEL-EKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
           DGL    ++ IF  IAC F G     +   L        IG++ L+++ LI    NTL M
Sbjct: 430 DGLNNRKDEAIFRHIACIFNGEKVSDIKLLLANSNLDVNIGLKNLVDRSLICERFNTLEM 489

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           H LLQELG++IV+ QS +  G+R  L   +++C VL  +TGT+ V GI LD     +E++
Sbjct: 490 HSLLQELGKEIVRTQSNQP-GEREFLVDLKDICDVLEHNTGTKKVLGITLD-IDETDELH 547

Query: 355 LCASAKAFSKMTNLRLLKI----------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
           +  S+  F  M NL  LKI              LP   +YL +RLRLL +  YP K LPS
Sbjct: 548 IHESS--FKGMHNLLFLKIYTKKLDQKKKVRWHLPERFDYLPSRLRLLRFDRYPSKCLPS 605

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
           N   +  +++ M  S++ +LW G+  L  L+ M L  S NL  +PD + A NLE L L  
Sbjct: 606 NFHPENLVKLQMQQSKLEKLWDGVHSLAGLRNMDLRGSRNLKEIPDLSMATNLETLKLSS 665

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK---------SLPTT 515
           C+ L E+  S+   NKL  L+M  C  L T+P  + +KSL++LNL           +PT 
Sbjct: 666 CSSLVELPSSIQYLNKLNDLDMSYCDHLETIPSGVNLKSLDRLNLSGCSRLKSFLDIPTN 725

Query: 516 ISGLKCLSTLDVSGDLKFREFPEIV--EHMEHLSEL--HLEGTAIR----------GLPL 561
           IS L    T D+  +L+ +   E++  E ++  + L   L  T  R           +P 
Sbjct: 726 ISWLDIGQTADIPSNLRLQNLDELILCERVQLRTPLMTMLSPTLTRLTFSNNPSFVEVPS 785

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
           SI+ L  L  L + NCR+L  LP  + NL  L SL LS CS+LK FP+I  ++ DL+   
Sbjct: 786 SIQNLYQLEHLEIMNCRNLVTLPTGI-NLDSLISLDLSHCSQLKTFPDISTNISDLN--- 841

Query: 622 LDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
           L  T+I+EVP SIE L+ L  L+++ C NL+ +  +I  LK L+  + S C +L
Sbjct: 842 LSYTAIEEVPLSIEKLSLLCYLDMNGCSNLLCVSPNISKLKHLERADFSDCVEL 895



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 164/351 (46%), Gaps = 72/351 (20%)

Query: 602 SKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           SKL+K  + V S+  L  + L G+ ++KE+P  + + T LE L LS C +LV LPSSI  
Sbjct: 620 SKLEKLWDGVHSLAGLRNMDLRGSRNLKEIPD-LSMATNLETLKLSSCSSLVELPSSIQY 678

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA-------VPHSTSWYSY-----I 708
           L  L  L++S C  LE +P  +  ++SL+ L++SG +       +P + SW        I
Sbjct: 679 LNKLNDLDMSYCDHLETIPSGVN-LKSLDRLNLSGCSRLKSFLDIPTNISWLDIGQTADI 737

Query: 709 PINLMRKS---------VALKLPSLSGLC-SLRKLNLTDCNLMEGALPSDIGNLCSLKEL 758
           P NL  ++         V L+ P ++ L  +L +L  ++ N     +PS I NL  L+ L
Sbjct: 738 PSNLRLQNLDELILCERVQLRTPLMTMLSPTLTRLTFSN-NPSFVEVPSSIQNLYQLEHL 796

Query: 759 -YLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR-------------- 803
             ++  + V+LPT I +L  L++++L  C +L++ P +  NI  +               
Sbjct: 797 EIMNCRNLVTLPTGI-NLDSLISLDLSHCSQLKTFPDISTNISDLNLSYTAIEEVPLSIE 855

Query: 804 ---------VNGCASLV---------------TLLDALKLCK-----SDSTMIACLDSLK 834
                    +NGC++L+                  D ++L +     S S M+  L +  
Sbjct: 856 KLSLLCYLDMNGCSNLLCVSPNISKLKHLERADFSDCVELTEASWNGSSSEMVKLLPADN 915

Query: 835 LLGNKSLAFSMLREYLEA-VSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
               K    +  +  L A + N    + +++ G E+P +F ++  G SI++
Sbjct: 916 FSTVKLNFINCFKLDLTALIQNQTFFMQLILTGEEVPSYFTHRTSGDSISL 966


>gi|297812011|ref|XP_002873889.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319726|gb|EFH50148.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 901

 Score =  338 bits (868), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 238/699 (34%), Positives = 370/699 (52%), Gaps = 75/699 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVR--- 57
           +D+   ++  L+   S++V+M+GI G  G+GKTTIAR +++ +S  F+ + F++NV+   
Sbjct: 187 IDAHMREMDSLLFLESTEVKMVGIWGPAGIGKTTIARALFNRLSENFQHTIFMENVKGSY 246

Query: 58  ---EISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
              ++   G  + LQ Q LS+++   D+    V D + ++  RLQ  KVL+V+DDV  ++
Sbjct: 247 RRTDLDDYGMKLRLQEQFLSEVI---DHKHMKVHD-LGLVKERLQDLKVLVVLDDVDKLE 302

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL +L    +WFGSGSRII+T+ ++ LL+ HG+  +Y+    +  E+LQ+F + AF    
Sbjct: 303 QLDALVKQSQWFGSGSRIIVTTENKQLLRAHGIKLIYEVGFPSRGESLQIFCLSAFGQSS 362

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
                ++L+  I + AG LPLAL VLGS L G + DE +S L RL      +I ++L++S
Sbjct: 363 APHGFIKLATEITKLAGYLPLALTVLGSSLRGMNKDEQKSALPRLRTSLNEDIKNVLRVS 422

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV--HNNTL 292
           +D L E +K IFL IAC F G + DYV   L   G     G+ VL  + LI +   N T+
Sbjct: 423 YDSLHERDKSIFLHIACLFNGENVDYVKQLLASSGLDVNFGLEVLTNRSLINISGFNRTI 482

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVE--GIVLDNYHHE 350
            MH LL++LG+++V  QS  E  KR  L    ++C VL   +G   V   GI +D     
Sbjct: 483 MMHTLLEQLGREVVYEQSIVEPRKRQFLVDASDICDVLFHDSGARAVSVLGISMD-ISKI 541

Query: 351 NEVYLCASAKAFSKMTNLRLLKICNL----------QLPNGLEYLSNRLRLLGWRGYPLK 400
           NE YL  + +AF+ M NL  L+               LP  L+YL ++LRLL W   P+K
Sbjct: 542 NEWYL--NEEAFAGMFNLMFLRFYKSPSSKDQPELNYLPLRLDYLPHKLRLLHWDACPMK 599

Query: 401 FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
            +P + + +  + + +  S++ +LW+G   L  LK M LS SENL  +PD + A N+E+L
Sbjct: 600 SMPMSFRPEFLVVLNIRESQLEKLWEGAPPLRSLKCMDLSMSENLKEIPDLSEAVNIEEL 659

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLK 520
            L  C  L  +  S+   NKL++L+M  C++L + P  I ++SL  LNL          +
Sbjct: 660 CLSYCRSLVLLPSSIKNLNKLVVLDMTYCSNLESFPSNIKLESLSILNLD---------R 710

Query: 521 CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL 580
           C          +   FPEI  ++ +LS   L  T+I+                       
Sbjct: 711 C---------SRLESFPEISSNIGYLS---LSETSIKN---------------------- 736

Query: 581 EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
             +P TV++   L +L +SGC  L  FP +  ++K L    L    IKEVP  IE L  L
Sbjct: 737 --VPATVASWPYLEALDMSGCRYLDTFPFLPETIKWLD---LSRKEIKEVPLWIEDLVLL 791

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVP 679
           + L ++ C  L  + S I  L+ ++TL+  GC  + + P
Sbjct: 792 KKLLMNSCMELRSISSGICRLEHIETLDFLGCKNVVSFP 830



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 109/267 (40%), Gaps = 78/267 (29%)

Query: 537 PEIVEHMEH-LSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
           P  ++++ H L  LH +   ++ +P+S      LV+LN++  + LE L      L+ L+ 
Sbjct: 578 PLRLDYLPHKLRLLHWDACPMKSMPMSFRP-EFLVVLNIRESQ-LEKLWEGAPPLRSLKC 635

Query: 596 LKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           + LS    LK+ P       DLSE                    +E L LS C++LV LP
Sbjct: 636 MDLSMSENLKEIP-------DLSEA-----------------VNIEELCLSYCRSLVLLP 671

Query: 656 SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRK 715
           SSI  L  L  L+++ C  LE+ P                                    
Sbjct: 672 SSIKNLNKLVVLDMTYCSNLESFPSN---------------------------------- 697

Query: 716 SVALKLPSLSGLCSLRKLNLTDCNLMEG--ALPSDIGNLCSLKELYLSKNSFVSLPTSIT 773
              +KL SLS       LNL  C+ +E    + S+IG L       LS+ S  ++P ++ 
Sbjct: 698 ---IKLESLS------ILNLDRCSRLESFPEISSNIGYLS------LSETSIKNVPATVA 742

Query: 774 HLSKLLNIELEDCKRLQSLPQLPPNIR 800
               L  +++  C+ L + P LP  I+
Sbjct: 743 SWPYLEALDMSGCRYLDTFPFLPETIK 769


>gi|357500729|ref|XP_003620653.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495668|gb|AES76871.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1235

 Score =  338 bits (868), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 240/673 (35%), Positives = 358/673 (53%), Gaps = 97/673 (14%)

Query: 1   MDSRCEKLR--FLMDSGSSDVRMIGICGMGGLG-----KTTIARVVYDLISHEFEASGFL 53
           ++SR E L+   L+DS      + G+C +G  G     KTT+A  +Y  ISH+F AS F+
Sbjct: 198 INSRIEVLQNHLLLDS------VDGVCAIGICGMGGIGKTTLAMTLYGQISHQFSASCFI 251

Query: 54  DNVREISS-KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVD 112
           D+V +I     G +  QRQ+L Q + +  + I N +   D++  RL+ +K LL+ D+V  
Sbjct: 252 DDVSKIYRLYDGPLDAQRQILLQTVGIEHHQICNRYSATDLIRRRLRHEKALLIFDNVDQ 311

Query: 113 VKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKT 172
           V+QL+ +A +REW G+GSRI+I SRDEH+LK +GVD VYK   +N  ++ +LF  KAFK 
Sbjct: 312 VEQLEKIAVHREWLGAGSRIVIISRDEHILKEYGVDVVYKVPLMNSTDSYELFCRKAFKV 371

Query: 173 YQPLQECVQ-LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDIL 231
            + +    Q L+  I+ YA GLPLA++VLGSFL G SV EW+S L RL   P ++++D+L
Sbjct: 372 EKIIMSDYQNLANEILDYAKGLPLAIKVLGSFLFGHSVAEWKSALARLRESPHNDVMDVL 431

Query: 232 QISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT 291
            +SFDG ++                   YV N L  CGFH  IG+ VLI+K LI++ +  
Sbjct: 432 HLSFDGPEK-------------------YVKNVLNCCGFHADIGLGVLIDKSLISIEDAN 472

Query: 292 LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
           + MH LL+ELG++IVQ  S +E  K SR+W ++++ +V+ E+   E VE I L      N
Sbjct: 473 IKMHSLLEELGRKIVQENSSKEQRKWSRIWSKKQLYNVMMENM-EEHVEAIFL------N 525

Query: 352 EVYLCASAKAFSKMTNLRLLKICNLQLPNGLEY-----------LSNRLRLLGWRGYPLK 400
           +  +  + + FSKM+NLRLL I N    N   Y           LSN+LR   W  YP  
Sbjct: 526 DDGIDMNVEHFSKMSNLRLLIIYNNSAWNYTTYKRPCFHGKLSCLSNKLRYFDWEHYPFW 585

Query: 401 FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
            LP +   ++ +E+ +  S   +LWK  K+   LK + LS S+ + ++ DF   PNLE L
Sbjct: 586 ELPLSFHPNELVELILKNSSFKQLWKSKKYFPNLKALDLSDSK-IEKIIDFGEFPNLESL 644

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKIL-MKSLEKLNLKS-------- 511
            LE C +L E+  S+ L  KL+ LN+  C +L+++P  I  + SLE L +          
Sbjct: 645 NLERCEKLVELDSSIGLLRKLVYLNLDYCINLVSIPNSIFCLSSLEDLYMCGCSKVFNNS 704

Query: 512 -------------------LPT---------TISGLKCLSTLDVSGDLKFREFPEIVEHM 543
                              LPT         ++  L CL  +D+S      + P+ +E +
Sbjct: 705 RNLIEKKHDINESFHKWIILPTPTRNTYCLPSLHSLYCLRQVDISF-CHLNQVPDAIEGL 763

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEIL-----PVTVSNLKCLRSLKL 598
             L  L+L G     LP S+  LS L  L+L++C+ LE L     P T      +RS   
Sbjct: 764 HSLERLYLAGNYFVTLP-SLRKLSKLEYLDLQHCKLLESLPQLPFPTTTEQDWWIRSQDF 822

Query: 599 SGCSKLKKFPEIV 611
           SG  +    P ++
Sbjct: 823 SGYRRTNHGPALI 835



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 200/449 (44%), Gaps = 71/449 (15%)

Query: 533 FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKC 592
           F E P +  H   L EL L+ ++ + L  S +    L  L+L + +  +I  +       
Sbjct: 584 FWELP-LSFHPNELVELILKNSSFKQLWKSKKYFPNLKALDLSDSKIEKI--IDFGEFPN 640

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV 652
           L SL L  C KL                        E+ SSI LL KL  LNL  C NLV
Sbjct: 641 LESLNLERCEKLV-----------------------ELDSSIGLLRKLVYLNLDYCINLV 677

Query: 653 RLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINL 712
            +P+SI  L SL+ L + GC K+ N    L  IE   +++          S++ +I +  
Sbjct: 678 SIPNSIFCLSSLEDLYMCGCSKVFNNSRNL--IEKKHDIN---------ESFHKWIILPT 726

Query: 713 MRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSI 772
             ++    LPSL  L  LR+++++ C+L    +P  I  L SL+ LYL+ N FV+LP S+
Sbjct: 727 PTRNTYC-LPSLHSLYCLRQVDISFCHL--NQVPDAIEGLHSLERLYLAGNYFVTLP-SL 782

Query: 773 THLSKLLNIELEDCKRLQSLPQLP-PNIRQV-------------RVNGCASLVTLLDALK 818
             LSKL  ++L+ CK L+SLPQLP P   +              R N   +L+ L     
Sbjct: 783 RKLSKLEYLDLQHCKLLESLPQLPFPTTTEQDWWIRSQDFSGYRRTNHGPALIGLF---- 838

Query: 819 LCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEA--VSNTRQHLSVVVPGSEIPEWFMYQ 876
                  +  C   ++     S+  S +  +++A    N    L +V PGSEIP W   Q
Sbjct: 839 -------IFNCPKLVERERCSSITISWMAHFIQANQQPNKLSALQIVTPGSEIPSWINNQ 891

Query: 877 NEGSSITVTR-PSNLYNKKKLVGYAICCVFHVL-KNSRGNNCFGSYPTHQLNCHIGHGIY 934
           + G+SI++   P    N   ++G+  C +  +  +++   +CF      ++         
Sbjct: 892 SVGASISIDESPVINDNNNNIIGFVSCVLISMAPQDTTMMHCFPLSIYMKMGAKRNRRKL 951

Query: 935 GIGFRDKFGQAGSDHLWLLYLSRQTCYDI 963
            +          S HLWL+Y  R++ YD+
Sbjct: 952 PVIIVRDLITTKSSHLWLVYFPRES-YDV 979


>gi|357494181|ref|XP_003617379.1| CCP [Medicago truncatula]
 gi|355518714|gb|AET00338.1| CCP [Medicago truncatula]
          Length = 1651

 Score =  338 bits (867), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 232/661 (35%), Positives = 355/661 (53%), Gaps = 36/661 (5%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVREISSK-GGLVSLQRQLLSQLLKLADNSIWNVFDG 90
           KT +A+ +Y+ I H+FEA+ FL NVRE S+K  GL  LQ+ LLS++ +  D  + +   G
Sbjct: 224 KTELAKSLYNKIVHQFEAASFLANVREKSNKINGLEDLQKTLLSEMFEKPDTDLGSTSKG 283

Query: 91  IDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLL-KTHG--V 147
           I  +  +L  KKVLLV+DDV + +QL++LAG  +WFG GSRIIIT+RD+ LL  TH   V
Sbjct: 284 IKEIKQKLGNKKVLLVLDDVDNKEQLKNLAGGSDWFGPGSRIIITTRDKGLLIGTHSFVV 343

Query: 148 DEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFL-SG 206
            ++Y+   LN  ++L+LF   AF    P      +S+R + YA GLPLAL+V+GS L  G
Sbjct: 344 QKIYEMTELNEKDSLELFCRNAFGKSHPETGYEAVSSRAVGYAKGLPLALKVIGSNLGGG 403

Query: 207 RSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLE 266
           +S+  W   L+  +  P   I ++LQ+S++ L+   + +FLDIACFFKG+  DYV   L+
Sbjct: 404 KSLRAWEDALKNYDRIPRRGIQEVLQVSYNVLEPNAQSVFLDIACFFKGDRVDYVEEILD 463

Query: 267 GCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEV 326
              F  V GI  L+ K L+ V +  L MHDL+QE+G+ IV+++SP    KRSRLW  +++
Sbjct: 464 --DFAAVTGIEELVNKSLLIVKDGCLDMHDLIQEMGRDIVKQESPRNPAKRSRLWSHKDI 521

Query: 327 CHVLT-ESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYL 385
             VL+ E  G+++++GI+LD      +     S  AF +M  LR+L + N    +  ++L
Sbjct: 522 IKVLSNEKYGSDVLQGIMLDPPQPIKQQDW--SDTAFEQMNCLRILIVRNTTFSSEPKHL 579

Query: 386 SNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENL 445
            + L LL W  YP K  P+    ++ I   +  S++  L +  K   KL +M  S +E++
Sbjct: 580 PDNLTLLDWEEYPSKSFPAMFHPEEIIVFNLPESKL-TLEEPFKVFSKLTIMNFSKNESI 638

Query: 446 IRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLE 505
             +PD +G  NL  L L+ CT L  +H S+     L   +   C  L     K+ + SLE
Sbjct: 639 TVIPDVSGVENLRVLRLDNCTNLIMVHESVGFLEHLTHFSASGCAKLRNFQQKMFLPSLE 698

Query: 506 KLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIEL 565
            L+L           C         ++   FP+I+  M    ++++  TAI  LP SI  
Sbjct: 699 FLDLNL---------C---------VELEHFPDILNKMNKPLKIYMINTAIEELPDSIGN 740

Query: 566 LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK--LKKF----PEIVRSMKDLSE 619
           L GLV + + +   L+ +P ++  L    + K  GCS+  L++F    P        L  
Sbjct: 741 LIGLVSIEMTSSWKLKYIPCSLFTLPNAVTFKFGGCSQLALRRFLHDIPSAANGRSTLKA 800

Query: 620 LFLDGTSIKEVPSSIELLTKLELLNL-SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
           L    + + +      L++ LEL  L +   N V LP  I     L  L++SGC  L  +
Sbjct: 801 LHFGNSGLSDEDLKAILISFLELQELIASDNNFVSLPVCIKDSAHLTKLDVSGCNMLREI 860

Query: 679 P 679
           P
Sbjct: 861 P 861


>gi|356533779|ref|XP_003535437.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 983

 Score =  338 bits (867), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 241/666 (36%), Positives = 362/666 (54%), Gaps = 47/666 (7%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGI 91
           KTTIA+ ++  +  +++A  FL NVRE S + GL SL+ +LLS LLK   +         
Sbjct: 232 KTTIAKALFSQLFPQYDAVCFLPNVREESRRIGLTSLRHKLLSDLLKEGHHE-------- 283

Query: 92  DMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDE-V 150
                RL  KKVL+V+DDV    QL  L     + G  S++IIT+R+ HLL+    D  V
Sbjct: 284 ----RRLSNKKVLIVLDDVDSFDQLDELCEPCNYVGPDSKVIITTRNRHLLRGRVDDRHV 339

Query: 151 YKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVD 210
           Y+    ++ E+L+LF++ AF   +P +    LS R +  A G+PLAL+VLGS L  RS+ 
Sbjct: 340 YEVKTWSFAESLELFSLHAFNERRPKKGYEDLSNRAVNCARGVPLALKVLGSNLYSRSIK 399

Query: 211 EWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGF 270
            W   L +LE      I D+LQ+S+DGL +LEKKIFLDIA FFKG  +D V   L+ C F
Sbjct: 400 FWDGELSKLENYRNDSIQDVLQVSYDGLHDLEKKIFLDIAFFFKGEHKDDVIRILDACDF 459

Query: 271 HPVIGIRVLIEKCLITVHNN-TLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHV 329
           +   GI VL +K L+T+ N+  + MHDL+QE+G  IV R   E+   RSRL   EEV  V
Sbjct: 460 YATSGIEVLEDKALVTLSNSGMIQMHDLIQEMGLNIV-RGGSEDPRNRSRLRDIEEVSDV 518

Query: 330 LTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNG-------- 381
           L    G++L+EGI LD    E+   L  +A  F +MTNLR+L+   L +P+G        
Sbjct: 519 LENKNGSDLIEGIKLDLSSIED---LHLNADTFDRMTNLRILR---LYVPSGKRSGNVHH 572

Query: 382 ---LEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMI 438
              L  LS++LR L W G  LK LP +      +EI M +S + ELW+G++ L  L  + 
Sbjct: 573 SGVLSKLSSKLRYLEWNGCRLKSLPKSFCGKMLVEICMPHSHVTELWQGVQDLANLVRID 632

Query: 439 LSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGK 498
           LS  ++L  +PD + A  L+ + L GC  L +IHPS+   + L    +  C ++ +L  +
Sbjct: 633 LSECKHLKNVPDLSKASKLKWVNLSGCESLCDIHPSVFSLDTLETSTLDGCKNVKSLKSE 692

Query: 499 ILMKSLEKLNL---KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTA 555
             ++SL+++++    SL         +  LD+S           +  +  L  L++EG  
Sbjct: 693 KHLRSLKEISVIGCTSLKEFWVSSDSIKGLDLSS-TGIEMLDSSIGRLTKLRSLNVEGLR 751

Query: 556 IRGLPLSIELLSGLVLLNLKNCR---SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVR 612
              LP  +  L  L  L + NCR     E L V     + LR L L  C  L + PE + 
Sbjct: 752 HGNLPNELFSLKCLRELRICNCRLAIDKEKLHVLFDGSRSLRVLHLKDCCNLSELPENIW 811

Query: 613 SMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK---NLVRLPSSIIAL-----KSL 664
            +  L EL LDG+ +K +P++I+ L +L  L+L +C+   +L +LP +++       +SL
Sbjct: 812 GLSKLHELRLDGSRVKTLPTTIKHLKRLNTLSLKNCRMLESLPKLPPNVLEFIATNCRSL 871

Query: 665 KTLNLS 670
           +T+++S
Sbjct: 872 RTVSIS 877



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 152/313 (48%), Gaps = 39/313 (12%)

Query: 509 LKSLPTTISGLK----CLSTLDVSGDLKFREFPEIVEHMEHLSELHL-EGTAIRGLPLSI 563
           LKSLP +  G      C+    V+      E  + V+ + +L  + L E   ++ +P  +
Sbjct: 593 LKSLPKSFCGKMLVEICMPHSHVT------ELWQGVQDLANLVRIDLSECKHLKNVP-DL 645

Query: 564 ELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK--KFPEIVRSMKDLSELF 621
              S L  +NL  C SL  +  +V +L  L +  L GC  +K  K  + +RS+K++S   
Sbjct: 646 SKASKLKWVNLSGCESLCDIHPSVFSLDTLETSTLDGCKNVKSLKSEKHLRSLKEIS--V 703

Query: 622 LDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPET 681
           +  TS+KE   S + +  L+L        +  L SSI  L  L++LN+ G  +  N+P  
Sbjct: 704 IGCTSLKEFWVSSDSIKGLDL----SSTGIEMLDSSIGRLTKLRSLNVEG-LRHGNLPNE 758

Query: 682 LGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDC-NL 740
           L  ++ L EL I              + I+  +  V        G  SLR L+L DC NL
Sbjct: 759 LFSLKCLRELRICNCR----------LAIDKEKLHVLF-----DGSRSLRVLHLKDCCNL 803

Query: 741 MEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIR 800
            E  LP +I  L  L EL L  +   +LPT+I HL +L  + L++C+ L+SLP+LPPN+ 
Sbjct: 804 SE--LPENIWGLSKLHELRLDGSRVKTLPTTIKHLKRLNTLSLKNCRMLESLPKLPPNVL 861

Query: 801 QVRVNGCASLVTL 813
           +     C SL T+
Sbjct: 862 EFIATNCRSLRTV 874


>gi|297791267|ref|XP_002863518.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309353|gb|EFH39777.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1150

 Score =  338 bits (867), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 244/705 (34%), Positives = 357/705 (50%), Gaps = 52/705 (7%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EKL F       + R++GI GM G+GKT++A  +++   ++F       N+RE  ++ G 
Sbjct: 197 EKLDF---DRCDETRIVGIVGMPGIGKTSLATELFNKYKYKFCRCVNFQNIREKWARSGA 253

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
             +++  L +LL++ + S      G   L S+L   KV +V+DDV   + LQ L GNR W
Sbjct: 254 ERVRKMFLEELLEITNISDDEATHGC--LESKLLLNKVFVVLDDVSSARHLQVLLGNRNW 311

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY---QPLQECVQL 182
              GSRI+I +RD  L+     +    P  LN  + L  F+  AF+       ++  +Q+
Sbjct: 312 IKEGSRIVIITRDRTLITELDPNPYVVPR-LNLVDGLMYFSFYAFEARICDPEMESYMQM 370

Query: 183 SARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELE 242
           S   + YA G PLAL++LG  L G+   +W++ L+     P   I ++ +IS+D L E E
Sbjct: 371 SREFVDYARGNPLALQMLGMDLRGKGEAQWKAWLDTSAKCPNKIIQNLFKISYDELSEQE 430

Query: 243 KKIFLDIACFFKGNDRDYVTNFLEGC---GFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           K  FLDIACFF+  D  Y  + L+      F     I  L+ K  I++    + MHDLL 
Sbjct: 431 KDAFLDIACFFRSEDEYYARSLLDSGDHESFQAAREITHLVHKFFISISGGCVEMHDLLH 490

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
               +I    S      +SRL     +   L     T+ V GI LD     N   +    
Sbjct: 491 TFAMEICSLASCGVNQVKSRLRNGNYIIAALQGKMETKTVRGISLDMSELTN---MPLER 547

Query: 360 KAFSKMTNLRLLKI------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
            AF+ M NLR LK+            C L  P+GL +    +R L W  +PL  LPS+  
Sbjct: 548 SAFTNMCNLRYLKLYSSTCPLECEGDCKLNFPDGLSFPLKEVRYLEWLKFPLDELPSDFT 607

Query: 408 MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
               I++ + YS+I ++WK  K   KLK + L++S  L ++  F+ APNL +L LEGCT 
Sbjct: 608 PKNLIDLKLPYSKIKQVWKESKGTPKLKWVDLNNSRMLQKISGFSKAPNLLRLNLEGCTS 667

Query: 468 LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDV 527
           L  +   +     L+ LN++ CTSL  LP         ++NL SL T I          +
Sbjct: 668 LDCLSEEMKTMQSLVFLNLRGCTSLRCLP---------EMNLSSLTTLI----------L 708

Query: 528 SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
           +G LK REF  I E++E    L+L+GTAI+ LP  +  L  L+LLNLK CR LEI+P  +
Sbjct: 709 TGCLKLREFRLISENIE---SLYLDGTAIKDLPTDMVKLQRLILLNLKECRRLEIIPECI 765

Query: 588 SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP---SSIELLTKLELLN 644
             LK L+ L LSGCS LK FP +  +M++   L LDGTSI E+P   S    L+ L  L+
Sbjct: 766 GKLKALQELILSGCSNLKSFPNLEDTMENFRVLLLDGTSIDEMPKIMSGSNSLSFLRRLS 825

Query: 645 LSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLE 689
                 +  L S I  L  LK L+L  C KL+++      I+ L+
Sbjct: 826 FRRNDVISSLGSDISQLYHLKWLDLKYCKKLKSLSTLPPNIQCLD 870



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 202/434 (46%), Gaps = 70/434 (16%)

Query: 545  HLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            +L  L+LEG T++  L   ++ +  LV LNL+ C SL  LP    NL  L +L L+GC K
Sbjct: 656  NLLRLNLEGCTSLDCLSEEMKTMQSLVFLNLRGCTSLRCLPEM--NLSSLTTLILTGCLK 713

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
            L++F  I    +++  L+LDGT+IK++P+ +  L +L LLNL +C+ L  +P  I  LK+
Sbjct: 714  LREFRLIS---ENIESLYLDGTAIKDLPTDMVKLQRLILLNLKECRRLEIIPECIGKLKA 770

Query: 664  LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPS 723
            L+ L LSGC  L++ P     +E+   L + GT++                     ++P 
Sbjct: 771  LQELILSGCSNLKSFPNLEDTMENFRVLLLDGTSID--------------------EMP- 809

Query: 724  LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS-LPTSITHLSKLLNIE 782
                            +M G+      +L  L+ L   +N  +S L + I+ L  L  ++
Sbjct: 810  ---------------KIMSGS-----NSLSFLRRLSFRRNDVISSLGSDISQLYHLKWLD 849

Query: 783  LEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKL---CKSDSTMIACLDSLKL--LG 837
            L+ CK+L+SL  LPPNI+ +  +GC SL T+   L      +   +M    +  KL    
Sbjct: 850  LKYCKKLKSLSTLPPNIQCLDAHGCISLQTVTSPLAFLMPTEDTHSMFIFTNCCKLNEAA 909

Query: 838  NKSLAFSMLREYLEAVSNTRQHLSVVV--------PGSEIPEWFMYQNEGSSITVTRPSN 889
               +A  +LR+    +S+   + S V         PG E+P WF +Q   S +    P +
Sbjct: 910  KNDIASHILRK-CRLISDDHHNESFVFRALIGTCYPGYEVPPWFSHQAFSSVLEPKLPPH 968

Query: 890  LYNKKKLVGYAICCV--FHVLKNSRGN---NCFGSYPTHQLNCHIGHGIYGIGFR--DKF 942
             +   K +G A+C +  FH  ++        C   +     +C       G  F   ++ 
Sbjct: 969  -WCDNKFLGLALCAIVSFHDYRDQNNRLLVKCTCEFENLDASCSQFSVPVGGWFEPGNEP 1027

Query: 943  GQAGSDHLWLLYLS 956
                SDH+++ Y+S
Sbjct: 1028 RTVESDHVFIGYIS 1041


>gi|251748502|gb|ACT11053.1| TIR-NB-LRR resistance protein [Arachis diogoi]
          Length = 1095

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 219/630 (34%), Positives = 346/630 (54%), Gaps = 26/630 (4%)

Query: 3   SRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK 62
           SR E L   +      VR+IGI GMGG GK T++ VVY+L+  E+E+  FL NVRE+S +
Sbjct: 240 SRVESL---LRQEPESVRVIGIWGMGGFGKITVSEVVYNLLRDEYESVVFLRNVREVSLR 296

Query: 63  GGLVSLQRQLLSQLLKLADNSIWNVFDGI-DMLGSRLQRKKVLLVIDDVVDVKQLQSLAG 121
            G++ L+ +L S+LL   +N   +  +G+   +  R+ R KVL+V+DDV   +Q + L G
Sbjct: 297 HGIIYLKNELFSKLL--GENLEIDTQNGLPTYVEKRIGRMKVLIVLDDVNQSEQFEILVG 354

Query: 122 NREWFGSGSRIIITSRDEHLLKTHG-VDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ-EC 179
             + FGSGSRII+T+RD  +L  +   ++ YK   L  DEALQLFN+ AF+  + ++ E 
Sbjct: 355 TPQSFGSGSRIIVTTRDRQVLAKYAHANDTYKVEPLESDEALQLFNLIAFQQNEVVEKEY 414

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             L+ R++ +A G+PL L+ LG     +    W S LE+L   P  ++ D++++S+D L 
Sbjct: 415 RALAERVVDHAKGIPLVLKTLGHLPHEKEKWIWESELEKLGKIPNKKVFDMMRLSYDELD 474

Query: 240 ELEKKIFLDIACFFKGND--RDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHD 296
             EK + LDIACFF G      Y+ + L+   F     ++ L +   IT+   + + MHD
Sbjct: 475 RQEKSMLLDIACFFDGMKLKVKYLESLLKHGDFPVPAALKRLEDISFITISKEDVVTMHD 534

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           ++QE+  +IV+++S E+ G  SR+W  E++  VL  + G+E +  I   +Y       + 
Sbjct: 535 IVQEMAWEIVRQESIEDPGNYSRIWNPEDIYQVLKNNQGSEAIRSINF-SYSKATVRNMQ 593

Query: 357 ASAKAFSKMTNLRLLKICN----LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
            S + FSKM+ LR L        L  P GL+ L +RLR L W  YPLK LP     +K +
Sbjct: 594 LSPQVFSKMSKLRFLDFYGERHLLHFPEGLQQLPSRLRYLRWTYYPLKSLPKKFSAEKLV 653

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
            + + YS++ +LW GI++L  LKV+   +S  L   PD + A NLE L  + C RL  +H
Sbjct: 654 ILELPYSQVEKLWYGIQNLVNLKVLKAPYSSQLKEFPDLSKATNLEILDFKYCLRLTRVH 713

Query: 473 PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
           PS+   NKL  L++  C+ L  L     +KSL  L+L      ++    +S      DL+
Sbjct: 714 PSVFSLNKLETLDLSWCSQLAKLETNAHLKSLRYLSLYHC-KRLNKFSVISENMTELDLR 772

Query: 533 ---FREFPEIVEHMEHLSELHLEGTAIRGLPL-SIELLSGLVLLNLKNCRSLEILPVTVS 588
               RE P        L +LHL  + ++ +P  S++LL+ L  L++ +C++L+ LP    
Sbjct: 773 HTSIRELPSSFGCQSKLEKLHLANSEVKKMPADSMKLLTSLKYLDISDCKNLQTLPELPL 832

Query: 589 NLKCLRSLKLSGCSKLKK--FPEIVRSMKD 616
           +++ L +     C+ LK   FP     +K+
Sbjct: 833 SIETLDA---DNCTSLKAVLFPNASEQLKE 859



 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 181/421 (42%), Gaps = 80/421 (19%)

Query: 508 NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHM-EHLSELHLEGTAIRGLPLSIELL 566
           N++  P   S +  L  LD  G+     FPE ++ +   L  L      ++ LP      
Sbjct: 591 NMQLSPQVFSKMSKLRFLDFYGERHLLHFPEGLQQLPSRLRYLRWTYYPLKSLPKKFSA- 649

Query: 567 SGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS 626
             LV+L L   + +E L   + NL  L+ LK    S+LK+FP++ ++             
Sbjct: 650 EKLVILELPYSQ-VEKLWYGIQNLVNLKVLKAPYSSQLKEFPDLSKA------------- 695

Query: 627 IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIE 686
                      T LE+L+   C  L R+  S+ +L  L+TL+LS C +L  + ET   ++
Sbjct: 696 -----------TNLEILDFKYCLRLTRVHPSVFSLNKLETLDLSWCSQLAKL-ETNAHLK 743

Query: 687 SLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALP 746
           SL  L +             Y    L + SV  +        ++ +L+L   ++ E  LP
Sbjct: 744 SLRYLSL-------------YHCKRLNKFSVISE--------NMTELDLRHTSIRE--LP 780

Query: 747 SDIGNLCSLKELYLSKNSFVSLPT-SITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVN 805
           S  G    L++L+L+ +    +P  S+  L+ L  +++ DCK LQ+LP+LP +I  +  +
Sbjct: 781 SSFGCQSKLEKLHLANSEVKKMPADSMKLLTSLKYLDISDCKNLQTLPELPLSIETLDAD 840

Query: 806 GCASLVTLL-----DALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHL 860
            C SL  +L     + LK  K  +    CL     L N+ L    L  Y+  V  + Q+L
Sbjct: 841 NCTSLKAVLFPNASEQLKENKKKAVFWNCLK----LENQFLNAVALNAYINMVRFSNQYL 896

Query: 861 SV-----------------VVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICC 903
           S                  V P S++P W  YQ     +TV   S  Y  K  +G+ +C 
Sbjct: 897 SAIGHDNVDNSNEDPEASYVYPRSKVPNWLEYQTNMDHLTVNLSSAPYAPK--LGFILCF 954

Query: 904 V 904
           +
Sbjct: 955 I 955



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 109/210 (51%), Gaps = 23/210 (10%)

Query: 492 LITLPGKILMKSLEKLNLKSLPTT--------ISGLKCLSTLDVSGDLKFREFPEI--VE 541
           L +LP K    S EKL +  LP +        I  L  L  L      + +EFP++    
Sbjct: 640 LKSLPKKF---SAEKLVILELPYSQVEKLWYGIQNLVNLKVLKAPYSSQLKEFPDLSKAT 696

Query: 542 HMEHLSELH-LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
           ++E L   + L  T +     S+  L+ L  L+L  C  L  L  T ++LK LR L L  
Sbjct: 697 NLEILDFKYCLRLTRVHP---SVFSLNKLETLDLSWCSQLAKLE-TNAHLKSLRYLSLYH 752

Query: 601 CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPS-SII 659
           C +L KF  I  +M   +EL L  TSI+E+PSS    +KLE L+L++ + + ++P+ S+ 
Sbjct: 753 CKRLNKFSVISENM---TELDLRHTSIRELPSSFGCQSKLEKLHLANSE-VKKMPADSMK 808

Query: 660 ALKSLKTLNLSGCFKLENVPETLGQIESLE 689
            L SLK L++S C  L+ +PE    IE+L+
Sbjct: 809 LLTSLKYLDISDCKNLQTLPELPLSIETLD 838


>gi|357499535|ref|XP_003620056.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
 gi|355495071|gb|AES76274.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
          Length = 1065

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 227/660 (34%), Positives = 356/660 (53%), Gaps = 66/660 (10%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + SR ++++ L+D GS   V M+GI G+GGLGK+T+A+ +Y+ I+ +FE S FL+NV+E 
Sbjct: 200 LQSRVQQMKSLLDEGSDHGVHMVGIYGIGGLGKSTLAKAIYNFIADQFECSCFLENVKES 259

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+   L +LQ++LL + L+L +  + +V +GI  +  RL  KK+LL++DDV  + QL++L
Sbjct: 260 SASNNLKNLQQELLLKTLQL-EIKLGSVSEGIPKIKERLHGKKILLILDDVDKLDQLEAL 318

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG GSR+IIT+RD+HLL  HG+++ Y    LN  EAL+L   KAFK  +     
Sbjct: 319 AGRLDWFGPGSRVIITTRDKHLLDCHGIEKTYAVEELNETEALELLRWKAFKNEKVPSSY 378

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R + YA GLPLA+EV+GS L G+S+ E  STL++    P  +I  IL++S+D L 
Sbjct: 379 EDILKRAVVYASGLPLAIEVVGSNLFGKSIAECESTLDKYGRIPHKDIQKILRLSYDALD 438

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFL-EGCGFHPVIGIRVLIEKCLITV-----HNNTLW 293
           E E+ +FLDIAC  KG   + V   L    G+     +RVL++K LI +         + 
Sbjct: 439 EEEQSVFLDIACCIKGCRLEEVEQILHHHYGYSIKSHLRVLVDKSLIKISWCFFSGIKVT 498

Query: 294 MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
           +H+L++ +G+++V+++SP+E G+RSRLW ++++ HVLTE+TGT   E I ++   H  E 
Sbjct: 499 LHELIEVMGKEVVRQESPKEPGERSRLWSQDDIVHVLTENTGTGKTEMICMN--LHSMES 556

Query: 354 YLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
            +    KAF KMT L+ L I N     GL++L + L+ L W G                 
Sbjct: 557 VIDKKGKAFKKMTRLKTLIIENGHCSKGLKHLPSSLKALKWEG----------------- 599

Query: 414 IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
              C S+        K    + ++IL H E L  +PD +G  NLEKL  E C  L  IH 
Sbjct: 600 ---CLSKSLSSSILSKKFQDMTILILDHCEYLTHIPDVSGLSNLEKLSFECCYNLITIHN 656

Query: 474 SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGLKCLSTLDV 527
           S+   NKL  L+   C  L   P  + + SL++L+      LKS P  +  +  +  +D+
Sbjct: 657 SIGHLNKLERLSAFGCRKLKRFP-PLGLASLKELDICCCSSLKSFPELLCKMTNIKEIDL 715

Query: 528 SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLP-----LSIELLSGLVLLNLKNC----- 577
             ++   E P   +++  L EL +    +   P     +  ++ S +  L +  C     
Sbjct: 716 DYNISIGELPSSFQNLSELDELSVREARMLRFPKHNDRMYSKVFSKVTKLRIYECNLSDE 775

Query: 578 -------------------RSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLS 618
                               + +ILP  +S    L+ L L  CS L++   I  ++K+LS
Sbjct: 776 YLQIVLKWCVNVELLDLSHNNFKILPECLSECHHLKHLGLHYCSSLEEIRGIPPNLKELS 835



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 134/301 (44%), Gaps = 47/301 (15%)

Query: 596 LKLSGCSKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNLVRL 654
           L L  C  L   P+ V  + +L +L  +   ++  + +SI  L KLE L+   C+ L R 
Sbjct: 620 LILDHCEYLTHIPD-VSGLSNLEKLSFECCYNLITIHNSIGHLNKLERLSAFGCRKLKRF 678

Query: 655 PSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD----ISGTAVPHSTSWYSYIPI 710
           P   + L SLK L++  C  L++ PE L ++ +++E+D    IS   +P S    S +  
Sbjct: 679 PP--LGLASLKELDICCCSSLKSFPELLCKMTNIKEIDLDYNISIGELPSSFQNLSELDE 736

Query: 711 NLMRKSVALKLPSLSG------LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNS 764
             +R++  L+ P  +          + KL + +CNL +  L   +    +++ L LS N+
Sbjct: 737 LSVREARMLRFPKHNDRMYSKVFSKVTKLRIYECNLSDEYLQIVLKWCVNVELLDLSHNN 796

Query: 765 FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDS 824
           F  LP  ++    L ++ L  C  L+ +  +PPN++++    C SL +            
Sbjct: 797 FKILPECLSECHHLKHLGLHYCSSLEEIRGIPPNLKELSAYQCKSLSS------------ 844

Query: 825 TMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSE--IPEWFMYQNEGSSI 882
                          S    ++ + L     TR     + P  +  IP+WF +Q+ G +I
Sbjct: 845 ---------------SCRRMLMSQELHEARCTR----FLFPNEKEGIPDWFEHQSRGDTI 885

Query: 883 T 883
           +
Sbjct: 886 S 886


>gi|356542401|ref|XP_003539655.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1014

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 233/580 (40%), Positives = 342/580 (58%), Gaps = 26/580 (4%)

Query: 11  LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS-SKGGLVSLQ 69
           L+ SGS +V M+GI G+GG+GKTT+AR  Y++I+ +FE   FL ++RE + SK  LV LQ
Sbjct: 208 LLGSGS-EVSMVGIYGIGGIGKTTVARAAYNMIADQFEGLCFLADIREKAISKHRLVQLQ 266

Query: 70  RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG 129
             LLS +L   D  + +V  GI ++  RL++KKVLL++DDV  + QLQ LAG   WFGSG
Sbjct: 267 ETLLSDILGEKDIKVGDVSRGIPIIERRLRKKKVLLILDDVDKLVQLQVLAGGYCWFGSG 326

Query: 130 SRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRY 189
           S+IIIT+RD+ LL THGV ++++   LN ++A +LF+  AFK  +     V +  R + Y
Sbjct: 327 SKIIITTRDKKLLATHGVVKLHEVKQLNDEKAFELFSWHAFKRNKFDPSYVDILNRAVFY 386

Query: 190 AGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDI 249
           A GLPLALEV+GS L G+S+DE  S L++ E  P   I DIL++S+DGL+E EK IFLDI
Sbjct: 387 ACGLPLALEVIGSHLFGKSLDECNSALDKYERIPHRGIHDILKVSYDGLEEDEKGIFLDI 446

Query: 250 ACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELGQQIVQR 308
           ACFF   +  +V   L   GFH   GIRVL +K LI +  +  + MHDL+Q +G++IV++
Sbjct: 447 ACFFNTCNMRFVKQMLHARGFHAEDGIRVLSDKSLIKIDESGCVKMHDLIQHMGREIVRQ 506

Query: 309 QSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNL 368
           +S  +  KRSRLW +E++  VL E+ GT+ +E I+L N   + EV    S KAF KM NL
Sbjct: 507 ESKLKPRKRSRLWLDEDIVRVLEENKGTDKIEAIML-NVRDKKEVQW--SGKAFKKMKNL 563

Query: 369 RLLKICNLQLPNGL-EYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKG 427
           ++L I    + + + ++L N LR+L W  YP   LP +    K +EI        E ++ 
Sbjct: 564 KILVIIGQAIFSSIPQHLPNSLRVLEWSSYPSPSLPPDFN-PKELEILNMPQSCLEFFQP 622

Query: 428 IKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMK 487
           +K  + L  +     + L  +      P L  L L+ CT L ++H S+   + L+ L+  
Sbjct: 623 LKRFESLISVNFEDCKFLTELHSLCEVPFLRHLSLDNCTNLIKVHDSVGFLDNLLFLSAI 682

Query: 488 DCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLS 547
            CT L  L   I ++SLE                   LD++   + + FPE+V  M+ + 
Sbjct: 683 GCTQLEILVPCIKLESLE------------------FLDLTECFRLKSFPEVVGKMDKIK 724

Query: 548 ELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
           +++L+ T I  LP SI  L GL  L L+ C  L  LP+++
Sbjct: 725 DVYLDKTGITKLPHSIGNLVGLERLYLRQCTQLYQLPISI 764



 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 1/110 (0%)

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
           S+  L  L+ L+   C  LEIL V    L+ L  L L+ C +LK FPE+V  M  + +++
Sbjct: 669 SVGFLDNLLFLSAIGCTQLEIL-VPCIKLESLEFLDLTECFRLKSFPEVVGKMDKIKDVY 727

Query: 622 LDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSG 671
           LD T I ++P SI  L  LE L L  C  L +LP SI  L +++ +   G
Sbjct: 728 LDKTGITKLPHSIGNLVGLERLYLRQCTQLYQLPISIHILPNVEVITDYG 777



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 24/167 (14%)

Query: 643 LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHST 702
           +N  DCK L  L  S+  +  L+ L+L  C  L  V +++G +++L  L   G       
Sbjct: 632 VNFEDCKFLTEL-HSLCEVPFLRHLSLDNCTNLIKVHDSVGFLDNLLFLSAIGCT----- 685

Query: 703 SWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK 762
                         + + +P +  L SL  L+LT+C  ++ + P  +G +  +K++YL K
Sbjct: 686 -------------QLEILVPCIK-LESLEFLDLTECFRLK-SFPEVVGKMDKIKDVYLDK 730

Query: 763 NSFVSLPTSITHLSKLLNIELEDCKRLQSLP---QLPPNIRQVRVNG 806
                LP SI +L  L  + L  C +L  LP    + PN+  +   G
Sbjct: 731 TGITKLPHSIGNLVGLERLYLRQCTQLYQLPISIHILPNVEVITDYG 777



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 41/152 (26%)

Query: 576 NCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIE 635
           N + LEIL +  S L+  + LK        +F  ++    +  +   +  S+ EVP    
Sbjct: 603 NPKELEILNMPQSCLEFFQPLK--------RFESLISVNFEDCKFLTELHSLCEVPF--- 651

Query: 636 LLTKLELLNLSDCKNLVRLPSSI-----------------------IALKSLKTLNLSGC 672
               L  L+L +C NL+++  S+                       I L+SL+ L+L+ C
Sbjct: 652 ----LRHLSLDNCTNLIKVHDSVGFLDNLLFLSAIGCTQLEILVPCIKLESLEFLDLTEC 707

Query: 673 FKLENVPETLGQIESLEE--LDISG-TAVPHS 701
           F+L++ PE +G+++ +++  LD +G T +PHS
Sbjct: 708 FRLKSFPEVVGKMDKIKDVYLDKTGITKLPHS 739


>gi|357499505|ref|XP_003620041.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
 gi|355495056|gb|AES76259.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
          Length = 861

 Score =  337 bits (865), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 224/617 (36%), Positives = 340/617 (55%), Gaps = 61/617 (9%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + SR ++++ L+D GS   V M+GI G+GGLGK+T+A+ +Y+ I+ +FE S FL+NV+E 
Sbjct: 200 LQSRVQQVKSLLDEGSDHGVHMVGIYGIGGLGKSTLAKAIYNFIADQFECSCFLENVKES 259

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+   L +LQ++LL + L+L +  + +V +GI  +  RL  KK+LL++DDV  + QL +L
Sbjct: 260 SASNNLKNLQQELLLKTLQL-EIKLGSVSEGIPKIKERLHGKKILLILDDVDKLDQLDAL 318

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG GSR+IIT+RD+HLL  HG+++ Y    LN  EAL+L   KAFK  +     
Sbjct: 319 AGGLDWFGPGSRVIITTRDKHLLDCHGIEKTYAVEELNGTEALELLRWKAFKNEKVPSSY 378

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R + YA GLPLA+EV+GS L G+S+ E  STL++    P  +I  IL++S+D L+
Sbjct: 379 EDILKRAVVYASGLPLAIEVVGSNLFGKSIAECESTLDKYGRIPHKDIQKILRLSYDALE 438

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITV-----HNNTLW 293
           E E+ +FLDIAC  KG   + V   L    G+     I VL++K LI +         + 
Sbjct: 439 EEEQSVFLDIACCIKGCRLEKVKQILHAHYGYSIESHIGVLVDKSLINISWCCFSGIKVT 498

Query: 294 MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
           +H+L++ +G+++V+++SP+E G+RSRLW ++++ HVL E+TGT   E I ++   H  E 
Sbjct: 499 LHELIEVMGKEVVRQESPKEPGERSRLWSQDDIVHVLKENTGTGKTEMICMN--LHSMES 556

Query: 354 YLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
            +    KAF KMT L+ L I N     GL+YL + L+ L W G                 
Sbjct: 557 VIDKKGKAFKKMTRLKTLIIENGHCSKGLKYLRSSLKALKWEG----------------- 599

Query: 414 IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
              C S+        K    + ++IL H E L  +PD +G  NLEKL  E C  L  IH 
Sbjct: 600 ---CLSKSLSSSILSKKFQDMTILILDHCEYLTHIPDVSGLSNLEKLSFEYCKNLITIHN 656

Query: 474 SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKF 533
           S+   NKL  L+   C +L   P                P    GL  L  L +S     
Sbjct: 657 SIGHLNKLERLSAFGCRTLKRFP----------------PL---GLASLKELKLSCCYSL 697

Query: 534 REFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGL---------VLLNLKNCRSLEILP 584
           + FP+++  M ++ ++    T+IR LP S + LS L         + +NL +C+SLE + 
Sbjct: 698 KSFPKLLCKMTNIDKIWFWYTSIRELPSSFQNLSELDELSVREFGIHINLYDCKSLEEIR 757

Query: 585 VTVSNLKCLRSLKLSGC 601
               NL+ + +    GC
Sbjct: 758 GIPPNLEVVDAY---GC 771



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 93/225 (41%), Gaps = 55/225 (24%)

Query: 593 LRSLKLSGCSKLKKFPEIVRS-MKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
           L++LK  GC        I+    +D++ L LD          +  L+ LE L+   CKNL
Sbjct: 592 LKALKWEGCLSKSLSSSILSKKFQDMTILILDHCEYLTHIPDVSGLSNLEKLSFEYCKNL 651

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPIN 711
           + + +SI  L  L+ L+  GC  L+  P                             P+ 
Sbjct: 652 ITIHNSIGHLNKLERLSAFGCRTLKRFP-----------------------------PL- 681

Query: 712 LMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTS 771
                         GL SL++L L+ C  ++ + P  +  + ++ +++    S   LP+S
Sbjct: 682 --------------GLASLKELKLSCCYSLK-SFPKLLCKMTNIDKIWFWYTSIRELPSS 726

Query: 772 ITHLSKL---------LNIELEDCKRLQSLPQLPPNIRQVRVNGC 807
             +LS+L         ++I L DCK L+ +  +PPN+  V   GC
Sbjct: 727 FQNLSELDELSVREFGIHINLYDCKSLEEIRGIPPNLEVVDAYGC 771



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 11/99 (11%)

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
           SI  L+ L  L+   CR+L+  P     L  L+ LKLS C  LK FP+++  M ++ +++
Sbjct: 657 SIGHLNKLERLSAFGCRTLKRFPPL--GLASLKELKLSCCYSLKSFPKLLCKMTNIDKIW 714

Query: 622 LDGTSIKEVPSSIELLTKLELL---------NLSDCKNL 651
              TSI+E+PSS + L++L+ L         NL DCK+L
Sbjct: 715 FWYTSIRELPSSFQNLSELDELSVREFGIHINLYDCKSL 753


>gi|356561225|ref|XP_003548883.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1052

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 230/603 (38%), Positives = 331/603 (54%), Gaps = 44/603 (7%)

Query: 8   LRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLV 66
           ++ L+D GS DV  M+GI G+GG+GKTT+A  VY+ I+  FEAS FL+NVRE S+K GL 
Sbjct: 198 VKSLLDVGSDDVVHMVGIHGLGGVGKTTLAVAVYNSIARHFEASYFLENVRETSNKKGLQ 257

Query: 67  SLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWF 126
            LQ  LLS++++     + N  +G  ++  +L++KKVLL++DDV +  QLQ++ G+ +WF
Sbjct: 258 HLQSILLSKIVRDKKIKLTNWREGTHIIKHKLKQKKVLLILDDVNEHIQLQAIIGSPDWF 317

Query: 127 GSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQ-LSAR 185
           G GSR+IIT+RDEHLL  H V + Y    LN   ALQL   KAF+  + +      +  R
Sbjct: 318 GRGSRVIITTRDEHLLALHNVKKTYMLRELNKKYALQLLIQKAFELEKEVDPSYHDILNR 377

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
            + YA GLPLALEV+GS L G+S++EW S L   E  P   I  IL++S+D L E EK I
Sbjct: 378 AVTYASGLPLALEVIGSNLFGKSIEEWESALNGYERIPDKSIYMILKVSYDALNEDEKNI 437

Query: 246 FLDIACFFK----GNDRDYVTNFLEGC-GFHPVIGIRVLIEKCLITVH-----NNTLWMH 295
           FLDIAC FK    G  +D +      C  +H    I VL++K LI +H     +  + +H
Sbjct: 438 FLDIACCFKEYKLGELQDILYAHYGRCMKYH----IGVLVKKSLINIHECSWDSKVMRLH 493

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DL++++G++IV+R+SP E GKRSRLW  E++  VL E+ GT  +E I ++      EV  
Sbjct: 494 DLIEDMGKEIVRRESPTEPGKRSRLWSHEDINLVLQENKGTSKIEIICMNFSSFGEEVEW 553

Query: 356 CASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGW-----RGYPLKFLPSNLQMDK 410
                AF KM NL+ L I +     G  +L N LR+L W     + +P  F P  L + K
Sbjct: 554 --DGNAFKKMKNLKTLIIQSDCFSKGPRHLPNTLRVLEWWRCPSQEWPRNFNPKQLAICK 611

Query: 411 TIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYE 470
               +  ++ +G      K L  L  + L   ++L  +PD +G  NLE L    C  L+ 
Sbjct: 612 L--PHSSFTSLGLAPLFNKRLVNLTRLTLDECDSLTEIPDVSGLSNLENLSFASCWNLFT 669

Query: 471 IHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGD 530
           IH S+ L  KL  LN + C  L + P  + + SLE   L           C S       
Sbjct: 670 IHHSVGLLEKLKTLNAEGCPELKSFP-PLKLTSLEMFQLSY---------CSS------- 712

Query: 531 LKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
                FPEI+  ME++++L     AI  LP S   L+ L LL ++N    +    T+ + 
Sbjct: 713 --LESFPEILGKMENITQLSWTDCAITKLPPSFRNLTRLQLLVVENLTEFDFDAATLISN 770

Query: 591 KCL 593
            C+
Sbjct: 771 ICM 773



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 137/340 (40%), Gaps = 71/340 (20%)

Query: 579 SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI--VRSMKDLSELFLDGTSIKEVPSSIEL 636
           SL + P+    L  L  L L  C  L + P++  + ++++LS  F    ++  +  S+ L
Sbjct: 619 SLGLAPLFNKRLVNLTRLTLDECDSLTEIPDVSGLSNLENLS--FASCWNLFTIHHSVGL 676

Query: 637 LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL---DI 693
           L KL+ LN   C  L   P   + L SL+   LS C  LE+ PE LG++E++ +L   D 
Sbjct: 677 LEKLKTLNAEGCPELKSFPP--LKLTSLEMFQLSYCSSLESFPEILGKMENITQLSWTDC 734

Query: 694 SGTAVPHSTSWYSYIPINLMRKSVALKLPS---LSGLCSLRKLNLTDC-NLMEGALPSDI 749
           + T +P S    + + + ++         +   +S +C + +LN  D   L    L  D+
Sbjct: 735 AITKLPPSFRNLTRLQLLVVENLTEFDFDAATLISNICMMPELNQIDAVGLQWRLLLDDV 794

Query: 750 GNLCS---------------------------LKELYLSKNSFVSLPTSITHLSKLLNIE 782
             L S                           +K+L LS + F  +P  I     L  + 
Sbjct: 795 LKLTSVVCSSVQSLTLELSDELLQLFLSCFVNVKKLNLSWSKFTVIPECIKECRFLTTLT 854

Query: 783 LEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLA 842
           L  C  L+ +  +PPN++        +L            +S+ I+ L + +L   +   
Sbjct: 855 LNYCNCLREIRGIPPNLKTFSAIDSPAL------------NSSSISMLLNQELHEARDTD 902

Query: 843 FSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSI 882
           FS+                   P  +IPEWF  Q+ G  I
Sbjct: 903 FSL-------------------PRVKIPEWFECQSRGPPI 923


>gi|227438255|gb|ACP30617.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1297

 Score =  337 bits (863), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 249/726 (34%), Positives = 375/726 (51%), Gaps = 85/726 (11%)

Query: 11  LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV-----REISSKGGL 65
           LM+  S +V+M+GI G  G+GKTTIAR ++  IS++F+ S F+D        E+  +   
Sbjct: 286 LMNLESKEVKMVGIWGTSGIGKTTIARALFCNISNQFQRSVFIDRAFISKSVEVYGRANP 345

Query: 66  VS------LQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           V       L+   LS++L+  +  I         +  RL+ +KVL+VIDD+ D   L +L
Sbjct: 346 VDYNMKLRLRMNFLSEILERKNMKI-------GAMEERLKHQKVLIVIDDLDDQYVLDAL 398

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDE-ALQLFNMKAFKTYQPLQE 178
           AG  +WFGSGSRII+ + D+ LLK HG+D +Y+  GL  DE AL++F   AF+   P   
Sbjct: 399 AGQTKWFGSGSRIIVVTTDKQLLKAHGIDSIYEV-GLPSDEQALEMFCRSAFRQDSPPDG 457

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
            ++ ++ ++  AG LPL L+VLGS L G + ++  + L RL      +I + L++ +DGL
Sbjct: 458 LMEFASEVVECAGSLPLGLDVLGSSLRGLNKEDCLNMLPRLRRSLDGKIEETLRVGYDGL 517

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
              +K IF  IAC F   D   +  FL        IG+  L+ K LI V    + MH LL
Sbjct: 518 LGEDKAIFRHIACLFNHVDVKDIKLFLADSELDVDIGLNNLVNKSLIQVRWGKVEMHHLL 577

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           QE+G+ +V  QS ++  KR  L   +++C VL+ES GT  + GI L N    +E  L   
Sbjct: 578 QEMGRNVVWLQSIKKPQKREFLVDSKDICDVLSESIGTSKLLGISL-NVDEIDE--LQVH 634

Query: 359 AKAFSKMTNLRLLKICN----------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQM 408
             AF  M NL  L+I +          L+LP   ++L  +L+LL W GYP++ +PS L  
Sbjct: 635 ETAFKGMRNLHFLEIYSNKVRVVNGDKLKLPKSFDWLPPKLKLLCWSGYPMRCMPSTLCT 694

Query: 409 DKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
           D+ +++ M  S++  LWKG+  L  L  M L  S +L  +PD T A NLE L L+ C  L
Sbjct: 695 DRLVKLKMRNSKLERLWKGVMSLTCLIEMDLCGSHDLKEIPDLTTATNLETLNLQSCRSL 754

Query: 469 YEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVS 528
            E+  S+   NKLI L+M+ C  L TLP  I +KSL+ +NL    +  S L+    +  +
Sbjct: 755 VELPSSIRNLNKLIKLDMQFCKKLKTLPTGINLKSLDHINL----SFCSQLRTFPKISTN 810

Query: 529 GDLKFREFPEIVE-----HMEHLSELHLEGT----------------------------- 554
               F E   +VE     H+++L +LH+                                
Sbjct: 811 ISYLFLEETSVVEFPTNLHLKNLVKLHMSKVTTNKQWKMFQPLTPFMPMLSPTLTELYLF 870

Query: 555 ---AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIV 611
              ++  LP S   L+ L  L +  C +LE LP  + NLK L SL  + CS+L  FP I 
Sbjct: 871 NIPSLVELPSSFRNLNKLRDLKISRCTNLETLPTGI-NLKSLESLDFTKCSRLMTFPNI- 928

Query: 612 RSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK-------NLVRLPSSIIALKSL 664
               ++S L L  T+I+EVP  +E+ +KL+ LN+  C        N+ +LP   +     
Sbjct: 929 --STNISVLNLSYTAIEEVPWWVEIFSKLKNLNMECCSKLEYVHPNISKLPRLAVDFSHC 986

Query: 665 KTLNLS 670
           + LN++
Sbjct: 987 EALNIA 992



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 122/252 (48%), Gaps = 41/252 (16%)

Query: 553 GTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVR 612
           G  +R +P ++     LV L ++N + LE L   V +L CL  + L G   LK+ P++  
Sbjct: 682 GYPMRCMPSTL-CTDRLVKLKMRNSK-LERLWKGVMSLTCLIEMDLCGSHDLKEIPDLTT 739

Query: 613 SMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC 672
           +                        T LE LNL  C++LV LPSSI  L  L  L++  C
Sbjct: 740 A------------------------TNLETLNLQSCRSLVELPSSIRNLNKLIKLDMQFC 775

Query: 673 FKLENVPETLGQIESLEELDISGTA----VPHSTSWYSYIPINLMRKSVALKLPSLSGLC 728
            KL+ +P  +  ++SL+ +++S  +     P  ++  SY+    + ++  ++ P+   L 
Sbjct: 776 KKLKTLPTGI-NLKSLDHINLSFCSQLRTFPKISTNISYL---FLEETSVVEFPTNLHLK 831

Query: 729 SLRKLNLTDCN------LMEGALPSDIGNLCSLKELYL-SKNSFVSLPTSITHLSKLLNI 781
           +L KL+++         + +   P       +L ELYL +  S V LP+S  +L+KL ++
Sbjct: 832 NLVKLHMSKVTTNKQWKMFQPLTPFMPMLSPTLTELYLFNIPSLVELPSSFRNLNKLRDL 891

Query: 782 ELEDCKRLQSLP 793
           ++  C  L++LP
Sbjct: 892 KISRCTNLETLP 903


>gi|15240889|ref|NP_198651.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758812|dbj|BAB09346.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332006918|gb|AED94301.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 833

 Score =  337 bits (863), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 244/730 (33%), Positives = 374/730 (51%), Gaps = 95/730 (13%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           MD+  +++  L+   S +VRMIGI G  G+GKTTIARV+Y   S  FE S F+ N++E+ 
Sbjct: 28  MDAHMKEMESLLCLDSDEVRMIGIWGPSGIGKTTIARVLYSQFSENFELSIFMGNIKELM 87

Query: 60  -------SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVD 112
                        + LQ+Q LSQ++   D  + ++    D    RL  KKVL+V+D +  
Sbjct: 88  YTRPVCSDEYSAKIQLQKQFLSQIINHKDMELHHLGVAQD----RLNDKKVLIVLDSIDQ 143

Query: 113 VKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKT 172
             QL ++A    WFG GSRIIIT++D+ LLK HG++ +YK    +  EA Q+F M AF  
Sbjct: 144 SIQLDAIAKETRWFGHGSRIIITTQDQKLLKAHGINHIYKVEFPSAYEAYQMFCMYAFGQ 203

Query: 173 YQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQ 232
             P     +L+  + +  G LPL L V+GS   G S  EW + L RL+I   + I  IL+
Sbjct: 204 NFPNDGFEELAWEVTKLLGHLPLGLRVMGSHFRGMSRHEWVNALPRLKIRLDASIQSILK 263

Query: 233 ISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLI-----TV 287
            S+D L E +K +FL IAC F   +   V ++L         G  +L EK LI     + 
Sbjct: 264 FSYDALCEEDKDLFLHIACLFNNQEMVEVEDYLALSFLDVRQGFHLLAEKSLINLKFLST 323

Query: 288 HNNTLWMHDLLQELGQQIVQ----RQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIV 343
           +   + MH+LL +LG+ IV+     QS  E GKR  L    ++C VLT++TG   V GI 
Sbjct: 324 NCTRIEMHNLLVQLGKDIVRHKPGHQSICEPGKRQFLIDARDICEVLTDNTGNRNVVGIF 383

Query: 344 LDNYHHENEVYLCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWR 395
           L+  +   ++ +  S +AF  M+NL+ L+  +        L LP GL  L  +LRL+ W 
Sbjct: 384 LEVRNLSCQLNI--SERAFDGMSNLKFLRFHDPYDDESDKLYLPQGLNNLPQKLRLIEWS 441

Query: 396 GYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAP 455
            +P+  LPSN      +EI M  S++  LW+G + L  LK M LS S++L  +PD + A 
Sbjct: 442 RFPMTCLPSNFCTKYLVEIRMKNSKLQNLWQGNQPLGNLKRMDLSESKHLKELPDLSTAT 501

Query: 456 NLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTT 515
           NLE LI+ GC  L E+  S+    KL++L+++ C+                  L++LPT 
Sbjct: 502 NLEYLIMSGCISLVELPSSIGKLRKLLMLSLRGCSK-----------------LEALPTN 544

Query: 516 ISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLK 575
           I+ L+ L  LD++  L  ++FPEI  +++   +L L  TAI+ +P +I+  S        
Sbjct: 545 IN-LESLDYLDLTDCLLIKKFPEISTNIK---DLKLTKTAIKEVPSTIKSWSH------- 593

Query: 576 NCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIE 635
                            LR L++S    LK+ P    ++  ++ L+++ T ++E+P  ++
Sbjct: 594 -----------------LRKLEMSYSENLKELP---HALDIITTLYINDTEMQEIPQWVK 633

Query: 636 LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
            ++ L+ L L  CK LV +P       SL  L ++ C             ESLE L+ S 
Sbjct: 634 KISHLQTLGLEGCKRLVTIPQ---LSDSLSQLVVTNC-------------ESLERLNFSF 677

Query: 696 TAVPHSTSWY 705
              P    W+
Sbjct: 678 QNHPERFLWF 687



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 132/276 (47%), Gaps = 34/276 (12%)

Query: 616 DLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
           DLSE       +KE+P  +   T LE L +S C +LV LPSSI  L+ L  L+L GC KL
Sbjct: 484 DLSE----SKHLKELPD-LSTATNLEYLIMSGCISLVELPSSIGKLRKLLMLSLRGCSKL 538

Query: 676 ENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINL----MRKSVALKLPS-LSGLCSL 730
           E +P  +  +ESL+ LD++   +      +  I  N+    + K+   ++PS +     L
Sbjct: 539 EALPTNIN-LESLDYLDLTDCLLIKK---FPEISTNIKDLKLTKTAIKEVPSTIKSWSHL 594

Query: 731 RKLNLTDC-NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRL 789
           RKL ++   NL E     DI     +  LY++      +P  +  +S L  + LE CKRL
Sbjct: 595 RKLEMSYSENLKELPHALDI-----ITTLYINDTEMQEIPQWVKKISHLQTLGLEGCKRL 649

Query: 790 QSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREY 849
            ++PQL  ++ Q+ V  C SL  L             +  L+  K L N++      RE+
Sbjct: 650 VTIPQLSDSLSQLVVTNCESLERL--NFSFQNHPERFLWFLNCFK-LNNEA------REF 700

Query: 850 LEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVT 885
           ++  S        ++P  E+P  F Y+  GSSI V 
Sbjct: 701 IQTSST-----HAILPSREVPANFTYRANGSSIMVN 731


>gi|356532660|ref|XP_003534889.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1036

 Score =  337 bits (863), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 242/707 (34%), Positives = 376/707 (53%), Gaps = 62/707 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D +   +  L+   S D R+IGI GMGG+GKTT+ + V++ +  E++ S FL N RE S
Sbjct: 185 IDKKIADIESLIRKESKDTRLIGIWGMGGIGKTTLPQEVFNKLQSEYQGSYFLANEREQS 244

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           SK G++SL++++ ++LL      +  +     +    ++R KVL+V+DDV D   L+ L 
Sbjct: 245 SKDGIISLKKEIFTELL----GHVVKIDTPNSLPNDTIRRMKVLIVLDDVNDSDHLEKLL 300

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G  + FG+GSRI+IT+RDE +L  +  DE+Y+    N+D+A +LF + AF       E  
Sbjct: 301 GTLDHFGAGSRILITTRDEQVLNANKADEIYRLREFNFDKAFELFKLNAFNQSDNQSEYD 360

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS R++ YA G+PL L+VL   L G++ + W S L++LE  P  E+ DI+++S+  L  
Sbjct: 361 ELSQRVVNYAKGIPLVLKVLARLLRGKNKEVWESELDKLEKMPLREVCDIMKLSYVDLDR 420

Query: 241 LEKKIFLDIACFFKGNDR----DYVTNFLEG--CGFHPVIGIRVLIEKCLIT-VHNNTLW 293
            E++IFLD+ACFF  +      DY+ + L+        V+G+  L +K LIT + NN + 
Sbjct: 421 KEQQIFLDLACFFLRSQTKITIDYLNSLLKDSESDNSVVVGLERLKDKALITFLENNFIS 480

Query: 294 MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
           +HD LQE+  +IV+++S  + G RSRLW  +++   L    G E +  I+L   H     
Sbjct: 481 IHDSLQEMACEIVRQESTGDPGSRSRLWDLDDIYEALKNYKGNEAIRSILL---HLPTTK 537

Query: 354 YLCASAKAFSKMTNLRLLKI----------------CNLQLP------------NGLEYL 385
               S + F+KM  LR L++                 NL  P             GL++L
Sbjct: 538 KENLSPRLFAKMNRLRFLEVSVEDNYDCLDQLHILGTNLCWPKQQKTRIVDILAKGLKFL 597

Query: 386 SNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENL 445
           +  LR L W+ Y  K LP     +K + + + YS + +LW G+K+L  LK + L  S+ L
Sbjct: 598 ATELRFLSWKSYSGKSLPEIFSTEKLVILKLPYSGMEKLWLGVKNLVNLKELDLRCSKKL 657

Query: 446 IRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLE 505
             +PD + A NLE ++L GC+ L  +HPS+    KL  LN+ DC SL  L     ++SL 
Sbjct: 658 KELPDISKATNLEVILLRGCSMLTNVHPSIFSLPKLERLNLSDCESLNILTSNSHLRSLS 717

Query: 506 KL------NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGL 559
            L      NLK        +K L      G  K +  P    H   L  LHL+G+AI+ L
Sbjct: 718 YLDLDFCKNLKKFSVVSKNMKELRL----GCTKVKALPSSFGHQSKLKLLHLKGSAIKRL 773

Query: 560 PLSIELLSGLVLLNLKNCRSLEILPVTVSNL-KCLRSLKLSGCSKLKKFPEIVRSMKDLS 618
           P S   L+ L+ L L NC  LE    T+  L   L +L    C+ L+  PE+ + +K L+
Sbjct: 774 PSSFNNLTQLLHLELSNCSKLE----TIEELPPFLETLNAQYCTCLQTLPELPKLLKTLN 829

Query: 619 ELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLK 665
               +  S++ +P   EL   LE+LN  DC++L+ +     A++ LK
Sbjct: 830 --VKECKSLQSLP---ELSPSLEILNARDCESLMTVLFPSTAVEQLK 871



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 156/330 (47%), Gaps = 37/330 (11%)

Query: 580 LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLT 638
           +E L + V NL  L+ L L    KLK+ P+I ++  +L  + L G S +  V  SI  L 
Sbjct: 633 MEKLWLGVKNLVNLKELDLRCSKKLKELPDISKAT-NLEVILLRGCSMLTNVHPSIFSLP 691

Query: 639 KLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
           KLE LNLSDC++L  L S+   L+SL  L+L  C  L+        ++ L        A+
Sbjct: 692 KLERLNLSDCESLNILTSNS-HLRSLSYLDLDFCKNLKKFSVVSKNMKELRLGCTKVKAL 750

Query: 699 PHSTSWYSYIPINLMRKSVALKLPS-LSGLCSLRKLNLTDCNLMEG--ALPSDIGNLCSL 755
           P S    S + +  ++ S   +LPS  + L  L  L L++C+ +E    LP  +  L + 
Sbjct: 751 PSSFGHQSKLKLLHLKGSAIKRLPSSFNNLTQLLHLELSNCSKLETIEELPPFLETLNA- 809

Query: 756 KELYLSKNSFVSLPTSITHLSKLL-NIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLL 814
                    + +   ++  L KLL  + +++CK LQSLP+L P++  +    C SL+T+L
Sbjct: 810 --------QYCTCLQTLPELPKLLKTLNVKECKSLQSLPELSPSLEILNARDCESLMTVL 861

Query: 815 ------DALKLCKSDSTMIACLD----SLKLLG-NKSLAFSML---------REYLEAVS 854
                 + LK  +       CL+    SL  +G N  +              RE++E  +
Sbjct: 862 FPSTAVEQLKENRKQVMFWNCLNLDEHSLVAIGLNAQINMMKFANHHLSTPNREHVENYN 921

Query: 855 NTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
           ++ Q +  + PGS +P W  Y+     IT+
Sbjct: 922 DSFQ-VVYMYPGSSVPGWLEYKTRNYHITI 950


>gi|357513917|ref|XP_003627247.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355521269|gb|AET01723.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1085

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 256/759 (33%), Positives = 394/759 (51%), Gaps = 73/759 (9%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQ--RQLL 73
           S DVR++GI GM G+GKTTIA  V+  +  E+E   F+ NVRE S + G  SL+  ++LL
Sbjct: 255 SEDVRVLGIWGMPGIGKTTIAEEVFRRLRSEYETCCFMANVREESERYGTNSLRLRKKLL 314

Query: 74  SQLLKLADNSIWNVFDGID-MLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRI 132
           S LL+  D    ++ +G+  ++  RL R KVL+V+DDV D +QL+ L G  +W G GSRI
Sbjct: 315 STLLEDEDLKD-DMINGLPPLVKKRLSRMKVLIVLDDVKDAEQLEVLVGTVDWLGPGSRI 373

Query: 133 IITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ-ECVQLSARIIRYAG 191
           IIT+RD+ +L +  VD++Y+   L+  E+ QLFN+ AF   + L+ E  +LS +++ Y  
Sbjct: 374 IITARDKQVL-SGKVDDIYEVEPLDSAESFQLFNLHAFNKQKHLEMEYYKLSKKMVDYTA 432

Query: 192 GLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIAC 251
           G+PL L+ L + L G+    W S    L+IE    + D+ ++ +  L   EK IFLDIAC
Sbjct: 433 GVPLVLKALANLLRGKDKAIWESQSRNLKIEQIENVHDVFRLIYTNLDYYEKIIFLDIAC 492

Query: 252 FFKGNDRDYVTNFLEGCGFHPVIGIRV--LIEKCLITVHNNTLW-MHDLLQELGQQIVQR 308
           FF G         L     +  +  R+  L +K L+T+   ++  MHD++QE  ++IV++
Sbjct: 493 FFDGLKLKLELINLLLKDRYYSVSTRLERLKDKALVTISQQSIVSMHDIIQETAREIVRQ 552

Query: 309 QSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNL 368
           +S EE G RSRL   +++ HVL +  G+E +  + +       E+ L  S +AF+KM+ L
Sbjct: 553 ESVEEPGNRSRLLDPDDIYHVLKDDKGSEAIRSMAI-RLSEIKELEL--SPQAFAKMSKL 609

Query: 369 RLLKIC--------NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
           + L I         +L LP GLE L N LR L W  YPL+FLPS    +  + + + YSR
Sbjct: 610 KFLDIYTKGSQNEGSLSLPQGLESLPNELRYLRWEYYPLEFLPSKFSAENLVILNLPYSR 669

Query: 421 IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
           + +LW G K +  L V+ILS S  L  +PDF+ A NL  L L+ C  L  +HPS+     
Sbjct: 670 LKKLWHGAKDIVNLNVLILSSSALLTELPDFSKATNLAVLDLQSCVGLTSVHPSVFSLKN 729

Query: 481 LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
           L  L++  C+SL         KSL+     S  + +S   C +          +EF    
Sbjct: 730 LEKLDLSGCSSL---------KSLQSNTHLSSLSYLSLYNCTA---------LKEFSVT- 770

Query: 541 EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
              E+++EL LE T+I+ LP SI L + L  L L +   +E LP ++ NL  LR L L  
Sbjct: 771 --SENINELDLELTSIKELPSSIGLQTKLEKLYLGHTH-IESLPKSIKNLTRLRHLDLHH 827

Query: 601 CSKLKKFPEIVRSMKDLSE---LFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSS 657
           CS+L+  PE+  S++ L     + L+  + +   S  +L  K + +   +C  L      
Sbjct: 828 CSELQTLPELPPSLETLDADGCVSLENVAFRSTASE-QLKEKKKKVTFWNCLKLNE---- 882

Query: 658 IIALKSLKTLNLSGCFKLENVPETLGQIESLEELD-------ISGTAVP----HSTSWYS 706
                SLK + L+    + N        +   + D         G+ +P    +ST+ + 
Sbjct: 883 ----PSLKAIELNAQINMMNFSHKHITWDRDRDHDHNQGMYVYPGSKIPEWLEYSTTRHD 938

Query: 707 YIPINLMRKSVALKL--------PSLSGLCSLRKLNLTD 737
           YI I+L       KL        P++S   S  K  ++D
Sbjct: 939 YITIDLFSAPYFSKLGFIFGFVIPTISSEGSTLKFKISD 977



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 171/381 (44%), Gaps = 59/381 (15%)

Query: 602  SKLKKFPEIVRSMKDLSELFLDGTSI-KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
            S+LKK     + + +L+ L L  +++  E+P      T L +L+L  C  L  +  S+ +
Sbjct: 668  SRLKKLWHGAKDIVNLNVLILSSSALLTELPD-FSKATNLAVLDLQSCVGLTSVHPSVFS 726

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK 720
            LK+L+ L+LSGC  L+++                      S +  S +    +    ALK
Sbjct: 727  LKNLEKLDLSGCSSLKSL---------------------QSNTHLSSLSYLSLYNCTALK 765

Query: 721  LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLN 780
              S++   ++ +L+L   ++ E  LPS IG    L++LYL      SLP SI +L++L +
Sbjct: 766  EFSVTS-ENINELDLELTSIKE--LPSSIGLQTKLEKLYLGHTHIESLPKSIKNLTRLRH 822

Query: 781  IELEDCKRLQSLPQLPPNIRQVRVNGCASL------VTLLDALKLCKSDSTMIACLDSLK 834
            ++L  C  LQ+LP+LPP++  +  +GC SL       T  + LK  K   T   CL    
Sbjct: 823  LDLHHCSELQTLPELPPSLETLDADGCVSLENVAFRSTASEQLKEKKKKVTFWNCLK--- 879

Query: 835  LLGNKSLAFSMLREYLEAVSNTRQHLS-------------VVVPGSEIPEWFMYQ-NEGS 880
             L   SL    L   +  ++ + +H++              V PGS+IPEW  Y      
Sbjct: 880  -LNEPSLKAIELNAQINMMNFSHKHITWDRDRDHDHNQGMYVYPGSKIPEWLEYSTTRHD 938

Query: 881  SITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRD 940
             IT+   S  Y  K  +G+    V   + +       GS    +++     GI     R 
Sbjct: 939  YITIDLFSAPYFSK--LGFIFGFVIPTISSE------GSTLKFKISDGEDEGIKMYLDRP 990

Query: 941  KFGQAGSDHLWLLYLSRQTCY 961
            + G   SDH++L+Y  R + Y
Sbjct: 991  RHG-IESDHVYLVYDPRCSHY 1010


>gi|356559367|ref|XP_003547971.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1047

 Score =  336 bits (862), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 254/733 (34%), Positives = 384/733 (52%), Gaps = 47/733 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++S   +++ L+D GS DV  M+GI G+GG+GKTT+A  VY+ I+  FEAS FL+NVRE 
Sbjct: 191 LESPVLEVKSLLDVGSDDVVHMVGIHGLGGVGKTTLAVAVYNSIAGHFEASCFLENVRET 250

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  LLS+ +      + N  +GI ++  +L++KKVLL++DDV + K LQ++
Sbjct: 251 SNKKGLQHLQSILLSKTVGEKKIKLTNWREGIPIIKHKLKQKKVLLILDDVDEHKHLQAI 310

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G+ +WFG GSR+IIT+R+EHLL  H V   YK   LN   ALQL   KAF+  + +   
Sbjct: 311 IGSPDWFGCGSRVIITTRNEHLLALHNVKITYKVRELNEKHALQLLTQKAFELEKEVDSS 370

Query: 180 VQ-LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
              +  R + YA GLPLALEV+GS L G+S+ EW S L   E  P   I  IL++S+D L
Sbjct: 371 YNDILNRALIYASGLPLALEVIGSNLFGKSIKEWESALNGYERIPDKSIYMILKVSYDAL 430

Query: 239 QELEKKIFLDIACFFK----GNDRDYVTNFLEGC-GFHPVIGIRVLIEKCLITVHNN--- 290
            E EK IFLDIAC FK    G  +D +      C  +H    I VL++K LI +H +   
Sbjct: 431 NEDEKSIFLDIACCFKDYELGELQDILYAHYGRCMKYH----IGVLVKKSLINIHGSWDY 486

Query: 291 -TLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHH 349
             + +HDL++++G++IV+R+SP E GKRSRLW  E++  VL E+ GT  +E I ++    
Sbjct: 487 KVMRLHDLIEDMGKEIVRRESPTEPGKRSRLWSHEDINQVLQENKGTSKIEIICMNFSSF 546

Query: 350 ENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGW-----RGYPLKFLPS 404
             EV       AF KM NL+ L I +     G +YL N LR+L W     R +P  F P 
Sbjct: 547 GEEVEW--DGDAFKKMKNLKTLIIKSDCFTKGPKYLPNTLRVLEWKRCPSRDWPHNFNPK 604

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
            L + K          +  L++  K    L ++ L   ++L  +PD +    LEKL    
Sbjct: 605 QLAICKLRHSSFTSLELAPLFE--KRFVNLTILNLDKCDSLTEIPDVSCLSKLEKLSFAR 662

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLPTTISG 518
           C  L+ IH S+ L  KL IL    C  L + P  + + SLE+       NL+S P  +  
Sbjct: 663 CRNLFTIHYSVGLLEKLKILYAGGCPELKSFP-PLKLTSLEQFELSGCHNLESFPEILGK 721

Query: 519 LKCLSTLDVSGDLKFREFPEIVEHMEHLSELHL--EGTAIRGLPLSIELLSGLVLLNLKN 576
           ++ ++ LD+  + + +EF     ++  L EL+L  E   +RG   +  + +  ++  L  
Sbjct: 722 MENITVLDLD-ECRIKEFRPSFRNLTRLQELYLGQETYRLRGFDAATFISNICMMPELAR 780

Query: 577 CRSLE----ILPVTV---SNLKC--LRSLKLSGCSKLKKFPEIVRS-MKDLSELFLDGTS 626
             + +    +LP  V   S++ C  ++ L+  GC    +   +  S   ++  L L  + 
Sbjct: 781 VEATQLQWRLLPDDVLKLSSVVCSSMQHLEFIGCDLSDELLWLFLSCFVNVKNLNLSASK 840

Query: 627 IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIE 686
              +P  I+    L  L L  C  L  +      LK    L   GC  L +   ++ Q +
Sbjct: 841 FTVIPECIKDCRFLTTLTLDYCDRLQEIRGIPPNLKYFSAL---GCLALTSSSISMLQNQ 897

Query: 687 SLEELDISGTAVP 699
            L E+  +   +P
Sbjct: 898 ELHEVGDTFFILP 910



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 145/366 (39%), Gaps = 80/366 (21%)

Query: 579 SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELL 637
           SLE+ P+       L  L L  C  L + P+ V  +  L +L F    ++  +  S+ LL
Sbjct: 618 SLELAPLFEKRFVNLTILNLDKCDSLTEIPD-VSCLSKLEKLSFARCRNLFTIHYSVGLL 676

Query: 638 TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA 697
            KL++L    C  L   P   + L SL+   LSGC  LE+ PE LG++E++  LD+    
Sbjct: 677 EKLKILYAGGCPELKSFPP--LKLTSLEQFELSGCHNLESFPEILGKMENITVLDLDECR 734

Query: 698 V----PHSTSWYSYIPINLMRKSVALK-------------LPSL---------------- 724
           +    P   +      + L +++  L+             +P L                
Sbjct: 735 IKEFRPSFRNLTRLQELYLGQETYRLRGFDAATFISNICMMPELARVEATQLQWRLLPDD 794

Query: 725 -----SGLCS-LRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
                S +CS ++ L    C+L +  L   +    ++K L LS + F  +P  I     L
Sbjct: 795 VLKLSSVVCSSMQHLEFIGCDLSDELLWLFLSCFVNVKNLNLSASKFTVIPECIKDCRFL 854

Query: 779 LNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGN 838
             + L+ C RLQ +  +PPN++     GC +L +                   S+ +L N
Sbjct: 855 TTLTLDYCDRLQEIRGIPPNLKYFSALGCLALTS------------------SSISMLQN 896

Query: 839 KSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVG 898
           +          L  V +T      ++P  +IP WF   + G SI        + + KL  
Sbjct: 897 QE---------LHEVGDT----FFILPSGKIPGWFECHSRGPSIF------FWFRNKLPA 937

Query: 899 YAICCV 904
             +C V
Sbjct: 938 IVVCFV 943


>gi|356522934|ref|XP_003530097.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1031

 Score =  336 bits (862), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 200/460 (43%), Positives = 294/460 (63%), Gaps = 16/460 (3%)

Query: 11  LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQR 70
            ++  S +VR+IGI GMGG+GKTT+A  ++  +S  +E + FL+NV E S +  L  +  
Sbjct: 212 FLNINSKEVRIIGIWGMGGIGKTTLAAAIFHKVSSHYEGTCFLENVAEESKRHDLNYVCN 271

Query: 71  QLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAG-NREWFGSG 129
           +LLSQLL+  D  I  +     ++  +L+RKKV +V+DDV   + L+ L G  REW GSG
Sbjct: 272 KLLSQLLR-EDLHIDTLKVIPSIVTRKLKRKKVFIVLDDVNTSELLEKLVGVGREWLGSG 330

Query: 130 SRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRY 189
           SRII+T+RD+H+L    VD++++   +N+  +L+LF++ AF    P +   +LS R + Y
Sbjct: 331 SRIIVTTRDKHVLIREVVDKIHEVKKMNFQNSLELFSLNAFGKTYPEKGYEELSKRAMDY 390

Query: 190 AGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDI 249
           A G+PLAL+VLGSFL  RS +EW S L +L+  P  +I  +L++S+ GL + EK IFLDI
Sbjct: 391 AKGIPLALKVLGSFLRSRSENEWHSALSKLKKSPNVKIQAVLRLSYAGLDDDEKNIFLDI 450

Query: 250 ACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLI-TVHNNTLWMHDLLQELGQQIVQR 308
           ACF KG  RD+VT  L  C F   IGIR L++K LI T ++N + MHDL+QE+G+++V+ 
Sbjct: 451 ACFLKGQSRDHVTKILNDCDFSADIGIRSLLDKALITTTYSNCIDMHDLIQEMGREVVRE 510

Query: 309 QSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNL 368
           +S +  G+RSRLW   E+  VLT + GT  VEGI LD        ++  S+K F KM NL
Sbjct: 511 ESVKFPGQRSRLWDPVEIYDVLTNNRGTAAVEGIWLD---MTQITHINLSSKVFRKMPNL 567

Query: 369 RLL----------KICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
           RLL          +I ++ LP GLE+L   LR LGW GYPL+ LPS    +K +E+ M Y
Sbjct: 568 RLLTFKSHNGDSERINSVYLPKGLEFLPKNLRYLGWNGYPLESLPSRFFPEKLVELSMPY 627

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLE 458
           S + +LW+G+++L  L+ + L  S++L+  P  + APNL+
Sbjct: 628 SNVEKLWQGVQNLPNLERIELCGSKHLVECPRLSHAPNLK 667


>gi|356561214|ref|XP_003548878.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1320

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 226/595 (37%), Positives = 330/595 (55%), Gaps = 37/595 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++S   +++ L+D G  DV  M+GI G+ G+GKTT+A  VY+ I+  FE+S FL+NVRE 
Sbjct: 191 LESPVRQVKSLLDVGRDDVVHMVGIHGLAGVGKTTLAVAVYNSIADHFESSCFLENVRET 250

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           ++K GL  LQ   LS+       + W   +GI ++  +L++KKVLL++DDV + KQLQ++
Sbjct: 251 TNKKGLEDLQSAFLSKTAGEIKLTNWR--EGITIIKCKLKQKKVLLILDDVDEHKQLQAI 308

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G+ +WFG GSR+IIT+RDEHLL  H V   YK   LN   ALQL   KAF+  + +   
Sbjct: 309 IGSPDWFGRGSRVIITTRDEHLLALHNVKITYKVRELNEKHALQLLTHKAFELEKEVDPS 368

Query: 180 VQ-LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
              +  R I YA GLPLALEV+GS L  +S++EW S L+  E  P  +I DIL++S+D L
Sbjct: 369 YHDILNRAITYASGLPLALEVIGSNLLEKSIEEWESALDGYERIPDKKIYDILKVSYDAL 428

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPV-IGIRVLIEKCLITVHNN----TLW 293
            E EK IFLDIAC FK    + + + L     H +   I VL++K LI +H +     + 
Sbjct: 429 NEDEKNIFLDIACCFKAYKLEELQDILYAHYGHCMKYHIGVLVKKSLINIHGSWDYKVMR 488

Query: 294 MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
           +HDL++++G++IV+R+SP   GKRSRLW  E++  VL E+ GT  +E I ++      EV
Sbjct: 489 LHDLIEDMGKEIVRRESPTNPGKRSRLWSHEDINQVLQENKGTSKIEIICMNFSSFGEEV 548

Query: 354 YLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGW-----RGYPLKFLPSNLQM 408
                  AF KM NL+ L I +     G ++L N LR+L W     + +P  F P  L +
Sbjct: 549 EW--DGDAFKKMKNLKTLIIKSDCFSEGPKHLPNTLRVLEWWRCPSQDWPHNFNPKQLAI 606

Query: 409 DKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
            K  +       +  L++  K L  L  +IL   ++L  +PD +   NLE L    C  L
Sbjct: 607 CKLPDSSFTSVGLAPLFE--KRLVNLTSLILDECDSLTEIPDVSCLSNLENLSFRKCRNL 664

Query: 469 YEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVS 528
           + IH S+ L  KL IL+ + C  L + P  + + SLE+  L           C+S     
Sbjct: 665 FTIHHSVGLLEKLKILDAECCPELKSFP-PLKLTSLERFEL---------WYCVS----- 709

Query: 529 GDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEIL 583
                  FPEI+  ME++++L L    I  LP S   L+ L  L+L +    E L
Sbjct: 710 ----LESFPEILGKMENITQLCLYECPITKLPPSFRNLTRLRSLSLGHHHQTEQL 760



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 91/410 (22%), Positives = 158/410 (38%), Gaps = 107/410 (26%)

Query: 579 SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI--VRSMKDLSELFLDGTSIKEVPSSIEL 636
           S+ + P+    L  L SL L  C  L + P++  + ++++LS  F    ++  +  S+ L
Sbjct: 616 SVGLAPLFEKRLVNLTSLILDECDSLTEIPDVSCLSNLENLS--FRKCRNLFTIHHSVGL 673

Query: 637 LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL---DI 693
           L KL++L+   C  L   P   + L SL+   L  C  LE+ PE LG++E++ +L   + 
Sbjct: 674 LEKLKILDAECCPELKSFPP--LKLTSLERFELWYCVSLESFPEILGKMENITQLCLYEC 731

Query: 694 SGTAVPHSTSWYSYIPINLMR-KSVAL-------------KLPSLSGLCSLRKLN-LTDC 738
             T +P S         NL R +S++L                 +S +C + +L+ ++  
Sbjct: 732 PITKLPPSFR-------NLTRLRSLSLGHHHQTEQLMDFDAATLISNICMMPELDGISAD 784

Query: 739 NLMEGALPSDIGNLCSLK---------------------------ELYLSKNSFVSLPTS 771
           NL    LP D+  L S+                            +L LS + F  +P  
Sbjct: 785 NLQWRLLPEDVLKLTSVVCSSVQSLTLKLSDELLPLFLSCFVNVIDLELSGSEFTVIPEC 844

Query: 772 ITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLD 831
           I     L  + L+ C RLQ +  +PPN++           + +D+  L  S  +M     
Sbjct: 845 IKECRFLSTLTLDRCDRLQEIRGIPPNLKT---------FSAMDSPALTSSSISM----- 890

Query: 832 SLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLY 891
                        +L + L    +T       +P  +IP+WF ++N G      RP   +
Sbjct: 891 -------------LLNQELHEAGDT----DFSLPRVQIPQWFEHKNPG------RPIRFW 927

Query: 892 NKKKLVGYAICCV------------FHVLKNSRGNNCFGSYPTHQLNCHI 929
            +        C                V  N R +  +G  P  +  C +
Sbjct: 928 FRNDFPAIVACIAKSDFQGVFDYPDLSVFINGREHKHYGRTPVLEKPCTV 977


>gi|358248732|ref|NP_001239675.1| TMV resistance protein N-like [Glycine max]
 gi|295083323|gb|ADF78115.1| rj2 protein [Glycine max]
 gi|295083325|gb|ADF78116.1| rj2 protein [Glycine max]
 gi|295083327|gb|ADF78117.1| rj2 protein [Glycine max]
 gi|308171400|gb|ADO15994.1| Rj2/Rfg1 protein [Glycine max]
          Length = 1051

 Score =  336 bits (861), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 232/584 (39%), Positives = 337/584 (57%), Gaps = 29/584 (4%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR  ++  L+D  S D V MIGI G+GG+GK+T+A  VY+LI+  F+ S FL ++RE 
Sbjct: 192 LESRLLEVTKLLDVESDDGVYMIGIHGIGGIGKSTLAIAVYNLIACHFDGSCFLKDLREK 251

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  LL ++L   + ++ +V  G  ++  RLQRKKVLL++DDV   +QLQ++
Sbjct: 252 SNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQRKKVLLILDDVDKHEQLQAI 311

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G   WFG GSR+IIT+RD+ LL +HGV   Y+   LN + ALQL   K+FKT +     
Sbjct: 312 VGRPCWFGPGSRVIITTRDKQLLASHGVKRTYEVELLNENNALQLLTWKSFKTEKVDPSY 371

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            ++   ++ YA GLPLALEV+GS L G+S++EW+S +++ +  P  +IL+IL++SFD L+
Sbjct: 372 KEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPGIQILEILKVSFDALE 431

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNN------TL 292
           E +K +FLDIAC F   D   V + L    G      I VL+EK LI    +       +
Sbjct: 432 EEQKNVFLDIACCFNRYDLTKVEDILRAHYGDCMKYHIGVLVEKSLIKKKFSWYGRVPRV 491

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            MHDL++++G++IV+++SP+E  KRSRLW  E++  VL ++ GT  +E I LD      E
Sbjct: 492 TMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDIIQVLEDNKGTSEIEIICLDFPCFGKE 551

Query: 353 VYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
             +  + KAF KM NL+ L I N +   G +YL N LR+L W  YP   LPS+    K  
Sbjct: 552 EIVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLPNNLRVLEWWRYPSHCLPSDFHPKKLS 611

Query: 413 EIYMCYSRIGEL-WKGI-KHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYE 470
              + YS I    W G+ K    L+ +     + L ++PD +G PNLE+   E C  L  
Sbjct: 612 ICKLPYSCISSFEWDGLWKMFVNLRTLNFDGCKCLTQIPDVSGLPNLEEFSFEHCLNLIT 671

Query: 471 IHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGD 530
           +H S+   +KL  LN   C  L + P  I + SLEKLNL           C S       
Sbjct: 672 VHNSIGFLDKLKTLNAFRCKRLRSFP-PIKLTSLEKLNLSF---------CYS------- 714

Query: 531 LKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL 574
                FP+I+  ME++ EL L  ++I  L  S + L+GL  L+L
Sbjct: 715 --LESFPKILGKMENIRELCLSNSSITELSFSFQNLAGLQALDL 756



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 173/443 (39%), Gaps = 122/443 (27%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
            LR+L   GC  L + P+ V  + +L E  F    ++  V +SI  L KL+ LN   CK L
Sbjct: 635  LRTLNFDGCKCLTQIPD-VSGLPNLEEFSFEHCLNLITVHNSIGFLDKLKTLNAFRCKRL 693

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP------HSTSWY 705
               P   I L SL+ LNLS C+ LE+ P+ LG++E++ EL +S +++        + +  
Sbjct: 694  RSFPP--IKLTSLEKLNLSFCYSLESFPKILGKMENIRELCLSNSSITELSFSFQNLAGL 751

Query: 706  SYIPINLMRKSVALKLPS---------------LSGLCSLR-----------------KL 733
              + ++ +      K+PS               L G   L+                 +L
Sbjct: 752  QALDLSFLSPHAIFKVPSSIVLMPELTEIFVVGLKGWQWLKQEEGEEKTGSIVSSKVVRL 811

Query: 734  NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
             +  CNL +     D      +KEL LS+N+F  LP  I     L  +++ DCK L+ + 
Sbjct: 812  TVAICNLSDEFFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRILDVCDCKHLREIR 871

Query: 794  QLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAV 853
             +PPN++      C SL +                           S     L + L   
Sbjct: 872  GIPPNLKHFFAINCKSLTS---------------------------SSISKFLNQELHEA 904

Query: 854  SNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS-- 911
             NT       +PG  IPEWF  Q+ G SI+       + + K     +C +   +++   
Sbjct: 905  GNT----VFCLPGKRIPEWFDQQSRGPSIS------FWFRNKFPDMVLCLIVAPIRSQFF 954

Query: 912  ------RGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLS----RQTCY 961
                   GN C         +C+               Q G  H +L  L     R + Y
Sbjct: 955  RPEVFINGNEC------SPYSCYF--------------QKGMHHAYLCDLREIEFRNSPY 994

Query: 962  DIRLPLESNLEPFES--NHVNVS 982
            ++         PFE+  NHVNV+
Sbjct: 995  EV---------PFENGWNHVNVT 1008


>gi|6721163|gb|AAF26791.1|AC016829_15 putative disease resistance protein [Arabidopsis thaliana]
          Length = 896

 Score =  336 bits (861), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 240/726 (33%), Positives = 372/726 (51%), Gaps = 109/726 (15%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M    EK++ L+D  S +++ IGI G  G+GKTTIAR +Y+  S +F+ S F+++++   
Sbjct: 240 MGDHMEKMKPLLDIDSDEMKTIGIWGPPGVGKTTIARSLYNQHSDKFQLSVFMESIKTAY 299

Query: 61  SKGGL-------VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDV 113
           +           + LQ++ LSQ+    +  I +    + +   RL  KKVL+VIDDV   
Sbjct: 300 TIPACSDDYYEKLQLQQRFLSQITNQENVQIPH----LGVAQERLNDKKVLVVIDDVNQS 355

Query: 114 KQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY 173
            Q+ +LA   +W G GSRIIIT++D  +L+ HG++ +Y+    NY+EALQ+F M AF   
Sbjct: 356 VQVDALAKENDWLGPGSRIIITTQDRGILRAHGIEHIYEVDYPNYEEALQIFCMHAFGQK 415

Query: 174 QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
            P     +L+ ++   +G LPL L+V+GS+  G +  EW   L R+      +I  IL++
Sbjct: 416 SPYDGFEELAQQVTTLSGRLPLGLKVMGSYFRGMTKQEWTMALPRVRTHLDGKIESILKL 475

Query: 234 SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPV-IGIRVLIEKCLITVHNNTL 292
           S+D L +++K +FL +AC F  +D + V   L G  F  +  G+ VL EK LI +    +
Sbjct: 476 SYDALCDVDKSLFLHLACSFHNDDTELVEQQL-GKKFSDLRQGLHVLAEKSLIHMDLRLI 534

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            MH LL +LG++IV++QS  E G+R  L    ++  VLT+ TG+  V GI  D    E E
Sbjct: 535 RMHVLLAQLGREIVRKQSIHEPGQRQFLVDATDIREVLTDDTGSRSVIGIDFDFNTMEKE 594

Query: 353 VYLCASAKAFSKMTNLRLLKI-------------------------CNLQLPNGLEYLSN 387
             L  S KAF  M+NL+ ++I                           L  P GL+YL  
Sbjct: 595 --LDISEKAFRGMSNLQFIRIYGDLFSRHGVYYFGGRGHRVSLDYDSKLHFPRGLDYLPG 652

Query: 388 RLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIR 447
           +LRLL W+ +P+  LPS    +  +++ M YS++ +LW+GI+ L  L+ + L+ S NL  
Sbjct: 653 KLRLLHWQQFPMTSLPSEFHAEFLVKLCMPYSKLEKLWEGIQPLRNLEWLDLTCSRNLKE 712

Query: 448 MPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI-LMKSLEK 506
           +PD + A NL++L +E                         C+SL+ LP  I    +L+K
Sbjct: 713 LPDLSTATNLQRLSIE------------------------RCSSLVKLPSSIGEATNLKK 748

Query: 507 LNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELL 566
           +NL+         +CLS ++                                LP S   L
Sbjct: 749 INLR---------ECLSLVE--------------------------------LPSSFGNL 767

Query: 567 SGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGT 625
           + L  L+L+ C SL  LP +  NL  + SL+   CS L K P    ++ +L  L L + +
Sbjct: 768 TNLQELDLRECSSLVELPTSFGNLANVESLEFYECSSLVKLPSTFGNLTNLRVLGLRECS 827

Query: 626 SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI 685
           S+ E+PSS   LT L++LNL  C  LV LPSS + L +L+ L+L  C  L  +P + G +
Sbjct: 828 SMVELPSSFGNLTNLQVLNLRKCSTLVELPSSFVNLTNLENLDLRDCSSL--LPSSFGNV 885

Query: 686 ESLEEL 691
             L+ L
Sbjct: 886 TYLKRL 891



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 111/196 (56%), Gaps = 10/196 (5%)

Query: 602 SKLKKFPEIVRSMKDLSELFLD-GTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           SKL+K  E ++ +++L  L L    ++KE+P  +   T L+ L++  C +LV+LPSSI  
Sbjct: 684 SKLEKLWEGIQPLRNLEWLDLTCSRNLKELPD-LSTATNLQRLSIERCSSLVKLPSSIGE 742

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDI----SGTAVPHSTSWYSYI-PINLMRK 715
             +LK +NL  C  L  +P + G + +L+ELD+    S   +P S    + +  +     
Sbjct: 743 ATNLKKINLRECLSLVELPSSFGNLTNLQELDLRECSSLVELPTSFGNLANVESLEFYEC 802

Query: 716 SVALKLPSLSG-LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSIT 773
           S  +KLPS  G L +LR L L +C+ M   LPS  GNL +L+ L L K ++ V LP+S  
Sbjct: 803 SSLVKLPSTFGNLTNLRVLGLRECSSMV-ELPSSFGNLTNLQVLNLRKCSTLVELPSSFV 861

Query: 774 HLSKLLNIELEDCKRL 789
           +L+ L N++L DC  L
Sbjct: 862 NLTNLENLDLRDCSSL 877



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 88/150 (58%), Gaps = 12/150 (8%)

Query: 674 KLENVPETLGQIESLEELDISGT----AVPHSTSWYSYIPINLMRKSVALKLPSLSG-LC 728
           KLE + E +  + +LE LD++ +     +P  ++  +   +++ R S  +KLPS  G   
Sbjct: 685 KLEKLWEGIQPLRNLEWLDLTCSRNLKELPDLSTATNLQRLSIERCSSLVKLPSSIGEAT 744

Query: 729 SLRKLNLTDC-NLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELEDC 786
           +L+K+NL +C +L+E  LPS  GNL +L+EL L + +S V LPTS  +L+ + ++E  +C
Sbjct: 745 NLKKINLRECLSLVE--LPSSFGNLTNLQELDLRECSSLVELPTSFGNLANVESLEFYEC 802

Query: 787 KRLQSLPQLPPNIRQVRVNG---CASLVTL 813
             L  LP    N+  +RV G   C+S+V L
Sbjct: 803 SSLVKLPSTFGNLTNLRVLGLRECSSMVEL 832


>gi|9965103|gb|AAG09951.1| resistance protein LM6 [Glycine max]
          Length = 863

 Score =  336 bits (861), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 228/593 (38%), Positives = 323/593 (54%), Gaps = 45/593 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++S   ++  L+D GS DV  +IGI GMGGLGKTT+A  V++ I+  F+ S FL NVRE 
Sbjct: 174 LESEVTEVMKLLDVGSHDVVHIIGIHGMGGLGKTTLALAVHNFIALHFDESCFLQNVREE 233

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  LLS+LL   D ++ +  +G  M+  RLQRKKVLL++DDV   +QL+++
Sbjct: 234 SNKHGLKHLQSILLSKLLGEKDITLTSWQEGASMIQHRLQRKKVLLILDDVDKRQQLKAI 293

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G  +WFG GSR+IIT+RD+HLLK H V+  Y+   LN   ALQL    AFK  +     
Sbjct: 294 VGRPDWFGPGSRVIITTRDKHLLKYHEVERTYEVKVLNQSAALQLLTWNAFKREKIDPSY 353

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R++ YA GLPLALEV+GS L  ++V EW S +E  +  P  EI +IL++SFD L 
Sbjct: 354 EDVLNRVVTYASGLPLALEVIGSNLFEKTVAEWESAMEHYKRIPSDEIQEILKVSFDALG 413

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLE----GCGFHPVIGIRVLIEKCLITVH-NNTLWM 294
           E +K +FLDIAC FKG +   V N L      C  H    I VL+EK L+ V   +T+ M
Sbjct: 414 EEQKNVFLDIACCFKGYEWTEVDNILRDLYGNCTKH---HIGVLVEKSLVKVSCCDTVEM 470

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           HD++Q++G++I +++SPEE GK  RL   +++  V         +E I LD    + E  
Sbjct: 471 HDMIQDMGREIERQRSPEEPGKCKRLLLPKDIIQVFK-------IEIICLDFSISDKEET 523

Query: 355 LCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
           +  +  AF KM NL++L I N +   G  Y    LR+L W  YP   LPSN      +  
Sbjct: 524 VEWNENAFMKMKNLKILIIRNCKFSKGPNYFPEGLRVLEWHRYPSNCLPSNFDPINLVIC 583

Query: 415 YMCYSRIGEL-WKG---------IKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
            +  S I    + G         ++ L  L V+     E L ++PD +  PNL++L    
Sbjct: 584 KLPDSSITSFEFHGSSKASLKSSLQKLGHLTVLNFDRCEFLTKIPDVSDLPNLKELSFNW 643

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLST 524
           C  L  +  S+   NKL  L+   C  L + P          LNL S          L T
Sbjct: 644 CESLVAVDDSIGFLNKLKTLSAYGCRKLTSFP---------PLNLTS----------LET 684

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNC 577
           L++ G      FPEI+  M++++ L L    I+ LP S + L GL+ L L +C
Sbjct: 685 LNLGGCSSLEYFPEILGEMKNITVLALHDLPIKELPFSFQNLIGLLFLWLDSC 737



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 105/254 (41%), Gaps = 38/254 (14%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
           L  L    C  L K P+ V  + +L EL  +   S+  V  SI  L KL+ L+   C+ L
Sbjct: 613 LTVLNFDRCEFLTKIPD-VSDLPNLKELSFNWCESLVAVDDSIGFLNKLKTLSAYGCRKL 671

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL---DISGTAVPHSTS----- 703
              P   + L SL+TLNL GC  LE  PE LG+++++  L   D+    +P S       
Sbjct: 672 TSFPP--LNLTSLETLNLGGCSSLEYFPEILGEMKNITVLALHDLPIKELPFSFQNLIGL 729

Query: 704 ---WYSYIPINLMRKSVALKLPSLSGLC----------------------SLRKLNLTDC 738
              W     I  +R S+A  +P L   C                      S+     TDC
Sbjct: 730 LFLWLDSCGIVQLRCSLA-TMPKLCEFCITDSCNRWQWVESEEGEEKVVGSILSFEATDC 788

Query: 739 NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPN 798
           NL +            +  L L  N+F  LP     L  L  + + DCK LQ +  LPPN
Sbjct: 789 NLCDDFFFIGSKRFAHVGYLNLPGNNFTILPEFFKELQFLTTLVVHDCKHLQEIRGLPPN 848

Query: 799 IRQVRVNGCASLVT 812
           ++      CASL +
Sbjct: 849 LKHFDARNCASLTS 862


>gi|227438223|gb|ACP30601.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1207

 Score =  335 bits (860), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 245/733 (33%), Positives = 370/733 (50%), Gaps = 83/733 (11%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV---- 56
           ++    KL  L+   + +VRM+G+ G  G+GKTTIARV++  +S  F  S F+D      
Sbjct: 190 IEDHVAKLSVLLQLDAEEVRMVGLWGSSGIGKTTIARVLFQRLSQHFRGSIFIDRAFVSK 249

Query: 57  -REISSKGG------LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDD 109
             EI  +         + LQR  LS++L   D  I    + +  +G RL+ +KVL+ IDD
Sbjct: 250 TMEIFKEANPDDYNMKLHLQRNFLSEILGKGDIKI----NHLSAVGERLKNQKVLIFIDD 305

Query: 110 VVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKA 169
             D   L++L G  +WFGSGSRI++ + D+  L+ HG++ +Y+ +    + A+++    A
Sbjct: 306 FDDQVVLEALVGQTQWFGSGSRIVVVTNDKQYLRAHGINHIYEVYLPTEELAVEMLCRSA 365

Query: 170 FKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILD 229
           F+     +   +L A++   AG LPL L VLGS L GR  + W   L RL+     +I  
Sbjct: 366 FRKKAAPEGFEELVAKVTGLAGSLPLGLNVLGSSLRGRDKEYWMDLLPRLQNGLDGKIEK 425

Query: 230 ILQISFDGL-QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH 288
            L++S+DGL  E +K +F  IAC F+     Y+   L   G    +G+  L +K LI V 
Sbjct: 426 TLRVSYDGLTSEEDKALFRHIACLFQWEKVTYLKLLLADSGLSVTVGLENLADKSLIHVR 485

Query: 289 NNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYH 348
            + + MH LL+E+G+ IV+ + PE   KR  L   +++C VL++ TGT  + GI L N  
Sbjct: 486 EDYVKMHRLLEEMGRGIVRLEEPE---KREFLVDAQDICDVLSQDTGTHKILGIKL-NID 541

Query: 349 HENEVYLCASAKAFSKMTNLRLLKI------------CNLQLPNGLEYLSNRLRLLGWRG 396
             +E  L     AF  M NLR L+I              + LP   +YL  +L++L W G
Sbjct: 542 EIDE--LNVHENAFKGMRNLRFLEIHSKKRYEIGNEEVTIHLPENFDYLPPKLKILDWFG 599

Query: 397 YPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPN 456
           YP++ LPS  + +K +++ M  S++ +LW+GI  L  LK M +  S NLI MPD + A N
Sbjct: 600 YPMRCLPSKFRPEKLVKLKMVNSKLEKLWEGIVSLTCLKEMDMWGSTNLIEMPDLSKATN 659

Query: 457 LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
           LE L L  C  L ++  S+   NKL  L++++C ++ T+P  I +KSL+ LN K      
Sbjct: 660 LETLKLRKCYSLVKLPSSIPHPNKLKKLDLRNCRNVETIPTGISLKSLKDLNTKGCSRMR 719

Query: 517 SGLKCLSTL-DVSGDLKFRE---------FPEIVEHMEHL-------------------- 546
           +  +  ST+ DV  D  F E         F  +     H                     
Sbjct: 720 TFPQISSTIEDVDIDATFIEEIRSNLSLCFENLHTFTMHSPKKLWERVQVCYIVFIGGKK 779

Query: 547 ------------SELHLEGTAIRG---LPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
                       S  HL+ +   G   LP S + L  L  L ++NC +LE LP  + NL 
Sbjct: 780 SSAEYDFVYLSPSLWHLDLSDNPGLVELPSSFKNLHNLSRLKIRNCVNLETLPTGI-NLG 838

Query: 592 CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
            L  + LSGCS+L+ FP+I     ++ EL L  T I+EVP  IE  ++L  L +  C NL
Sbjct: 839 SLSRVDLSGCSRLRTFPQI---STNIQELDLSETGIEEVPCWIEKFSRLNSLQMKGCNNL 895

Query: 652 VRLPSSIIALKSL 664
             +  +I   KSL
Sbjct: 896 EYVNLNISDCKSL 908



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 134/318 (42%), Gaps = 79/318 (24%)

Query: 495 LPGKILMKSLEKLN-----LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSEL 549
           LP K   + L KL      L+ L   I  L CL  +D+ G     E P++ +   +L  L
Sbjct: 605 LPSKFRPEKLVKLKMVNSKLEKLWEGIVSLTCLKEMDMWGSTNLIEMPDLSK-ATNLETL 663

Query: 550 HLEGT-AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
            L    ++  LP SI   + L  L+L+NCR++E +P  +S LK L+ L   GCS+++ FP
Sbjct: 664 KLRKCYSLVKLPSSIPHPNKLKKLDLRNCRNVETIPTGIS-LKSLKDLNTKGCSRMRTFP 722

Query: 609 EIVRSMKDLSELFLDGTSIKEVPSSIELLTK----------------------------- 639
           +I  +++D+    +D T I+E+ S++ L  +                             
Sbjct: 723 QISSTIEDVD---IDATFIEEIRSNLSLCFENLHTFTMHSPKKLWERVQVCYIVFIGGKK 779

Query: 640 -------------LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVP------- 679
                        L  L+LSD   LV LPSS   L +L  L +  C  LE +P       
Sbjct: 780 SSAEYDFVYLSPSLWHLDLSDNPGLVELPSSFKNLHNLSRLKIRNCVNLETLPTGINLGS 839

Query: 680 ------------ETLGQIES-LEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSG 726
                        T  QI + ++ELD+S T +     W     I    +  +L++   + 
Sbjct: 840 LSRVDLSGCSRLRTFPQISTNIQELDLSETGIEEVPCW-----IEKFSRLNSLQMKGCNN 894

Query: 727 LCSLRKLNLTDCNLMEGA 744
           L     LN++DC  + GA
Sbjct: 895 L-EYVNLNISDCKSLTGA 911



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 179/425 (42%), Gaps = 109/425 (25%)

Query: 602  SKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSI-- 658
            SKL+K  E + S+  L E+ + G T++ E+P  +   T LE L L  C +LV+LPSSI  
Sbjct: 622  SKLEKLWEGIVSLTCLKEMDMWGSTNLIEMPD-LSKATNLETLKLRKCYSLVKLPSSIPH 680

Query: 659  ---------------------IALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA 697
                                 I+LKSLK LN  GC ++   P+    I   E++DI  T 
Sbjct: 681  PNKLKKLDLRNCRNVETIPTGISLKSLKDLNTKGCSRMRTFPQISSTI---EDVDIDATF 737

Query: 698  VP-------------HSTSWYS-----------YIPINLMRKSVA-LKLPSLSGLCSLRK 732
            +              H+ + +S           YI     +KS A      LS   SL  
Sbjct: 738  IEEIRSNLSLCFENLHTFTMHSPKKLWERVQVCYIVFIGGKKSSAEYDFVYLSP--SLWH 795

Query: 733  LNLTDC-NLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELEDCKRLQ 790
            L+L+D   L+E  LPS   NL +L  L +    +  +LPT I +L  L  ++L  C RL+
Sbjct: 796  LDLSDNPGLVE--LPSSFKNLHNLSRLKIRNCVNLETLPTGI-NLGSLSRVDLSGCSRLR 852

Query: 791  SLPQLPPNIRQ-----------------------VRVNGCASLVTLLDALKLCKS----- 822
            + PQ+  NI++                       +++ GC +L  +   +  CKS     
Sbjct: 853  TFPQISTNIQELDLSETGIEEVPCWIEKFSRLNSLQMKGCNNLEYVNLNISDCKSLTGAS 912

Query: 823  -----DSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQN 877
                   + ++   S  +  + +   ++++E L     T     + + G E+P +F ++ 
Sbjct: 913  WNNHPRESALSYYHSFDIGIDFTKCLNLVQEALFQ-KKTYFGCQLKLSGEEVPSYFTHRT 971

Query: 878  EGSSITVTRP---SNLYNKKKLVGYAICCVFHVLKNS--------RGN--NCFGSYPTHQ 924
             G+S ++T P   S+L   +  + +  C VF   K S        +G+  NC  SY   Q
Sbjct: 972  TGTSSSLTIPLLHSSL--TQPFLRFRACIVFDSDKESYRSCAFRFKGSFRNCSDSYNQAQ 1029

Query: 925  LNCHI 929
              C +
Sbjct: 1030 DFCAV 1034


>gi|359493549|ref|XP_002268091.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 927

 Score =  335 bits (860), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 251/721 (34%), Positives = 416/721 (57%), Gaps = 50/721 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD    +L+ L+     +V M+GI G+GG+GKTTI++ +Y+ IS +F+   FL NV    
Sbjct: 200 MDFHLTQLKSLIKVELDEVLMVGIYGIGGIGKTTISKAIYNDISSQFDGCSFLGNVGG-K 258

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            + GL+ LQ+ LL  ++K       N+  GI+++  RL+ K+VL+V+DDV +  QL++LA
Sbjct: 259 CEDGLLKLQKTLLQDIVKCKVPKFNNISQGINVIKERLRSKRVLIVLDDVDNYMQLENLA 318

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G   W+G+ S IIIT++D+HLL  H V  +Y+   LN++++++LFN  AFK   P     
Sbjct: 319 GKHGWYGAKSIIIITTKDKHLLDQHEVKALYEVQKLNHEKSVELFNWWAFKQNTPKTGFE 378

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            LS  ++ Y  GLP+AL+VLG FL  +S++EW S L +++  P   + ++L++S+D L  
Sbjct: 379 SLSNSVVEYTHGLPVALKVLGGFLYEKSINEWESELHKVKKIPDEIVQNVLKVSYDKLDH 438

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
             ++IFLDIACFF+G D+D+V+  L   G + ++GI+VL +KCL+T+  N L MHDL+Q+
Sbjct: 439 TCQEIFLDIACFFRGKDKDFVSRIL---GSYAMMGIKVLNDKCLLTISENKLDMHDLVQQ 495

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +GQ+IV+++  +E G RSRLW   +V  VLT +TGT+ +EG+ +     +  +    S  
Sbjct: 496 MGQEIVRQECLKEPGNRSRLWDCNDVDSVLTRNTGTQAIEGLFV-----QGSLASQISTN 550

Query: 361 AFSKMTNLRLLKIC-------NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
           +F+K+  LRLLK+        + +    L++    LR   ++GYPL+ LP+N      +E
Sbjct: 551 SFTKLNRLRLLKVYYPHMWKKDFKALKNLDFPYFELRYFHFKGYPLESLPTNFHAKNLVE 610

Query: 414 IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
           + + +S I +LW+G + LD LKV+ LS+SE L+ + DF+   NLE LIL+G   + E+  
Sbjct: 611 LNLKHSSIKQLWQGNEILDNLKVINLSYSEKLVEISDFSRVTNLEILILKG---IEELPS 667

Query: 474 SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPT-TISGLKCLSTLDVS-GDL 531
           S+     L  LN+K C  L++LP  I  ++L+KL+++  P      +  + +LD++   L
Sbjct: 668 SIGRLKALKHLNLKCCAELVSLPDSI-CRALKKLDVQKCPKLERVEVNLVGSLDLTCCIL 726

Query: 532 KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCR-----SLEILPV- 585
           K R    ++    +L +  +EG  +    LS   LS LV    ++ R     +LE+L V 
Sbjct: 727 KQR----VIWWSNNLLQNEVEGEVLNHYVLS---LSSLVESCSRDYRGFHLSALEVLSVG 779

Query: 586 -----------TVSNLKCLRSLKLSGCSKLKK-FPEIVRSMKDLSELFLDGTSIK--EVP 631
                       +     L+S+ L  C+ +++  P  + ++  L  L L   S+   E+ 
Sbjct: 780 NFSPIQRRILSDIFRQSSLKSVCLRNCNLMEEGVPSDIWNLSSLVNLSLSNCSLTEGEIL 839

Query: 632 SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
           + I  ++ L+ L+L D  +   +P++II L  L+TL L  C KL  +PE    + +L+  
Sbjct: 840 NHICHVSSLQNLSL-DGNHFSSIPANIIQLSKLRTLGLYHCQKLLQIPELPPSLRALDVH 898

Query: 692 D 692
           D
Sbjct: 899 D 899



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 151/350 (43%), Gaps = 88/350 (25%)

Query: 531 LKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
           LK  +FP        L   H +G  +  LP +      LV LNLK+  S++ L      L
Sbjct: 576 LKNLDFPYF-----ELRYFHFKGYPLESLPTNFHA-KNLVELNLKH-SSIKQLWQGNEIL 628

Query: 591 KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKN 650
             L+ + LS   KL +  +  R + +L  L L G  I+E+PSSI  L  L+ LNL  C  
Sbjct: 629 DNLKVINLSYSEKLVEISDFSR-VTNLEILILKG--IEELPSSIGRLKALKHLNLKCCAE 685

Query: 651 LVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPI 710
           LV LP SI   ++LK L++  C KLE V     ++  +  LD++   +     W+S    
Sbjct: 686 LVSLPDSIC--RALKKLDVQKCPKLERV-----EVNLVGSLDLTCCILKQRVIWWSN--- 735

Query: 711 NLMRKSV--------ALKLPSLSGLCS--------------------------------- 729
           NL++  V         L L SL   CS                                 
Sbjct: 736 NLLQNEVEGEVLNHYVLSLSSLVESCSRDYRGFHLSALEVLSVGNFSPIQRRILSDIFRQ 795

Query: 730 --LRKLNLTDCNLMEGALPSDI----------------------GNLC---SLKELYLSK 762
             L+ + L +CNLME  +PSDI                       ++C   SL+ L L  
Sbjct: 796 SSLKSVCLRNCNLMEEGVPSDIWNLSSLVNLSLSNCSLTEGEILNHICHVSSLQNLSLDG 855

Query: 763 NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVT 812
           N F S+P +I  LSKL  + L  C++L  +P+LPP++R + V+ C  L T
Sbjct: 856 NHFSSIPANIIQLSKLRTLGLYHCQKLLQIPELPPSLRALDVHDCPCLET 905


>gi|224109502|ref|XP_002333244.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222835789|gb|EEE74224.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1060

 Score =  335 bits (859), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 264/747 (35%), Positives = 395/747 (52%), Gaps = 98/747 (13%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D R  ++  L+D  S DV ++GI GMGG+GKTTIA VV   +   FE   F  N R+ S
Sbjct: 220 IDVRVSEVESLLDMESLDVLIVGIWGMGGIGKTTIAEVVCSKVRSRFERI-FFANFRQQS 278

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGS----------RLQRKKVLLVIDDV 110
                  L+R  LS LL           + +D +GS          RL+R + L+V+D+V
Sbjct: 279 D------LRRSFLSWLLGQ---------ETLDTMGSLSFRDSFVRDRLRRIRGLIVLDNV 323

Query: 111 VDVKQLQS----LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFN 166
            ++  L+     L      FG GS+++ITSRD+ +L ++ VDE YK  GL  ++A+QLF+
Sbjct: 324 DNLMHLEEWRDLLDERNSSFGPGSKVLITSRDKQVL-SNVVDETYKVQGLTDEQAIQLFS 382

Query: 167 MKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSE 226
            KA K   P  +   L  +I R+  G PLAL+VLGS L G+S++EWRS L +L   P  +
Sbjct: 383 SKALKNCIPTSDHRHLIEQIGRHVQGNPLALKVLGSSLYGKSIEEWRSALNKLAQHP--Q 440

Query: 227 ILDILQISFDGLQELEKKIFLDIACFFKGN--DRDYVTNFLE-GCGFHPVIGIRVLIEKC 283
           I   L+IS+DGL   +K IFLDIA F   +  ++      L+   G   +  I  LI+KC
Sbjct: 441 IERALRISYDGLDSEQKSIFLDIAHFLTRSRWEKSRAIRILDVFYGRSVIFDINTLIDKC 500

Query: 284 LITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIV 343
           LI    ++L MHDLL+E+   IV+ +S +  G+RSRL    +V  VL E+ GT+ ++GI 
Sbjct: 501 LINTSPSSLEMHDLLREMAFNIVRAES-DFPGERSRLCHPRDVVQVLEENKGTQQIKGIS 559

Query: 344 LDNYHHENEVYLCASAKAFSKMTNLRLLK----ICNLQLP-NGLEYLSNRLRLLGWRGYP 398
           +D        ++   + AF+ M  LR L     +  + LP  GLEYL N+LR L W G+P
Sbjct: 560 VDGLSR----HIHLKSDAFAMMDGLRFLDFDHVVDKMHLPPTGLEYLPNKLRYLQWNGFP 615

Query: 399 LKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLE 458
            K LP +   +  +E+ +  S++ +LW G+K +  L+ + LS S  L  +PD + A NL 
Sbjct: 616 SKSLPPSFCAEHLVELDLRKSKLVKLWTGVKDVGNLRRIDLSDSPYLTELPDLSMAKNLV 675

Query: 459 KLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLP---GKIL--------------- 500
            LIL  C  L E+  SL   +KL  +++  C +L + P    K+L               
Sbjct: 676 SLILVDCPSLTEVPSSLQYLDKLEKIDLYRCYNLRSFPMLYSKVLRYLEINRCLDVTTCP 735

Query: 501 -------MKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG 553
                  +  LE+ ++K +P +++    L  LD+SG  K  +FPE +E +E   +L L G
Sbjct: 736 TISQNMELLILEQTSIKEVPQSVAS--KLELLDLSGCSKMTKFPENLEDIE---DLDLSG 790

Query: 554 TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI-VR 612
           TAI+ +P SI+ L+ L  L++  C  LE        +K L+ L LS  S +K+ P I  +
Sbjct: 791 TAIKEVPSSIQFLTSLCSLDMNGCSKLESFSEITVPMKSLQHLNLSK-SGIKEIPLISFK 849

Query: 613 SMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDC--KNLVRLP--------------- 655
            M  L+ L+LDGT IKE+P SI+ +  L+ L+L+    K L  LP               
Sbjct: 850 HMISLTFLYLDGTPIKELPLSIKDMVCLQHLSLTGTPIKALPELPPSLRKITTHDCASLE 909

Query: 656 --SSIIALKSL-KTLNLSGCFKLENVP 679
             +SII + SL   L+ + CFKL+  P
Sbjct: 910 TVTSIINISSLWHGLDFTNCFKLDQKP 936



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 158/310 (50%), Gaps = 31/310 (10%)

Query: 504 LEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSI 563
           L K  L  L T +  +  L  +D+S      E P++      +S + ++  ++  +P S+
Sbjct: 633 LRKSKLVKLWTGVKDVGNLRRIDLSDSPYLTELPDLSMAKNLVSLILVDCPSLTEVPSSL 692

Query: 564 ELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLD 623
           + L  L  ++L  C +L   P+  S  K LR L+++ C  +   P I ++M+    L L+
Sbjct: 693 QYLDKLEKIDLYRCYNLRSFPMLYS--KVLRYLEINRCLDVTTCPTISQNME---LLILE 747

Query: 624 GTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLG 683
            TSIKEVP S+   +KLELL+LS C  + + P +   L+ ++ L+LSG   ++ VP ++ 
Sbjct: 748 QTSIKEVPQSVA--SKLELLDLSGCSKMTKFPEN---LEDIEDLDLSGT-AIKEVPSSIQ 801

Query: 684 QIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEG 743
            + SL  LD++G +   S S  + +P+                  SL+ LNL+   + E 
Sbjct: 802 FLTSLCSLDMNGCSKLESFSEIT-VPMK-----------------SLQHLNLSKSGIKEI 843

Query: 744 ALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR 803
            L S   ++ SL  LYL       LP SI  +  L ++ L     +++LP+LPP++R++ 
Sbjct: 844 PLIS-FKHMISLTFLYLDGTPIKELPLSIKDMVCLQHLSLTGTP-IKALPELPPSLRKIT 901

Query: 804 VNGCASLVTL 813
            + CASL T+
Sbjct: 902 THDCASLETV 911


>gi|357514699|ref|XP_003627638.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355521660|gb|AET02114.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1184

 Score =  335 bits (859), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 246/692 (35%), Positives = 370/692 (53%), Gaps = 38/692 (5%)

Query: 10  FLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQ 69
           FL D  S +VR IGI GMGG+GKTT+A  ++  +S  +E S FL+NV E S + GL    
Sbjct: 202 FLKDD-SREVRTIGIWGMGGIGKTTLAAAIFQKVSSRYEGSCFLENVTEESKRHGLSYTY 260

Query: 70  RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAG-NREWFGS 128
            +LLS+LL   D  I        M+  RL+R K  +V+DDV  ++ L +L G   +  G+
Sbjct: 261 NRLLSKLLG-EDLHIETPKVISSMVMKRLKRMKAFIVLDDVRILELLNNLIGAGHDCLGA 319

Query: 129 GSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIR 188
           GSR+I+T+RD+++L   G+DE+++   +N   +++LF++ AF    P +   ++S  ++ 
Sbjct: 320 GSRVIVTTRDKYVLTGGGIDEIHEVEKMNSQNSIRLFSLNAFNKILPNEGYEEISNNVVS 379

Query: 189 YAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLD 248
           Y  G PLAL+VLGSFL  +S  EW S L +L+  P +EI  +L++S+D L + EK IFLD
Sbjct: 380 YTEGNPLALKVLGSFLRTKSKKEWNSALNKLKKIPNAEIQKVLRLSYDELDDTEKDIFLD 439

Query: 249 IACFFKGNDR-DYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELGQQIV 306
           IACFFKG  R   VT  L  C F   IGIR L+ K L+T+   N + MHDLLQE+G+QIV
Sbjct: 440 IACFFKGCGRSSRVTKILNVCDFFADIGIRNLLNKALVTITSTNDIQMHDLLQEMGRQIV 499

Query: 307 QRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMT 366
           + +S +  G+RSRLW   E+C VLT + GT  VE I LD    +    +  S+KAF+KM 
Sbjct: 500 REESIKNPGQRSRLWNASEICDVLTNNNGTSAVESICLD---MDQITRINLSSKAFTKMP 556

Query: 367 NLRLLK----------ICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
           NLRLL           I  + LP GL++L N LR   W  YPL +LPSN      +E+++
Sbjct: 557 NLRLLAFKYHNRDVKGINYVHLPEGLDFLPNNLRSFEWSAYPLNYLPSNFSPWNLVELHL 616

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
            YS + +LW G ++L  L+ + L  S +LI  P F+ APNL  + L  C  +  + PS+ 
Sbjct: 617 PYSNLEKLWNGTQNLPSLERIDLRWSAHLIECPKFSNAPNLYGIDLGNCESISHVDPSIF 676

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
              KL  L++  C SL +L      +S           ++   +C +  +     +    
Sbjct: 677 NLPKLEWLDVSGCKSLESLYSSTRSQS---------QASLLADRCYNLQEFISMPQNNND 727

Query: 537 PEIVEHMEHLSELHLEGTAI---RGLPLSIELLSGLVLLNLKNCRSL-EILPVTVSNLKC 592
           P I     + S  H+  + +        +IE  SG  +       +L ++LP      + 
Sbjct: 728 PSITTTWIYFSS-HISESLVDLPENFAYNIE-FSGSTMNEQDTFTTLHKVLPSPC--FRY 783

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV 652
           ++SL    C+ + + P+ +  +  L  L+L G  I  +P SI  L +L  L    CK L 
Sbjct: 784 VKSLTFYDCNNISEIPDSISLLSLLESLYLIGCPIISLPESINCLPRLMFLEARYCKMLQ 843

Query: 653 RLPSSIIALKSLKTLNLSGCFKLENVPETLGQ 684
            +PS     +S++   +  C  L NV  +  Q
Sbjct: 844 SIPS---LPQSIQWFYVWYCKSLHNVLNSTNQ 872



 Score = 47.0 bits (110), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 149/337 (44%), Gaps = 27/337 (8%)

Query: 501 MKSLEKLNLKSLP-TTISGLKCLS----TLDVSGDLKFREFPEIVEHM-EHLSELHLEGT 554
           M  + ++NL S   T +  L+ L+      DV G + +   PE ++ +  +L        
Sbjct: 539 MDQITRINLSSKAFTKMPNLRLLAFKYHNRDVKG-INYVHLPEGLDFLPNNLRSFEWSAY 597

Query: 555 AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
            +  LP +    + LV L+L    +LE L     NL  L  + L   + L + P+   + 
Sbjct: 598 PLNYLPSNFSPWN-LVELHLP-YSNLEKLWNGTQNLPSLERIDLRWSAHLIECPKFSNAP 655

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
                   +  SI  V  SI  L KLE L++S CK+L  L SS  + +S  +L    C+ 
Sbjct: 656 NLYGIDLGNCESISHVDPSIFNLPKLEWLDVSGCKSLESLYSSTRS-QSQASLLADRCYN 714

Query: 675 LE---NVPE-------TLGQIESLEELDISGTAVPHSTSW---YSYIPINLMRKSVALK- 720
           L+   ++P+       T   I     +  S   +P + ++   +S   +N       L  
Sbjct: 715 LQEFISMPQNNNDPSITTTWIYFSSHISESLVDLPENFAYNIEFSGSTMNEQDTFTTLHK 774

Query: 721 -LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLL 779
            LPS      ++ L   DCN +   +P  I  L  L+ LYL     +SLP SI  L +L+
Sbjct: 775 VLPS-PCFRYVKSLTFYDCNNI-SEIPDSISLLSLLESLYLIGCPIISLPESINCLPRLM 832

Query: 780 NIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDA 816
            +E   CK LQS+P LP +I+   V  C SL  +L++
Sbjct: 833 FLEARYCKMLQSIPSLPQSIQWFYVWYCKSLHNVLNS 869


>gi|297794807|ref|XP_002865288.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311123|gb|EFH41547.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1337

 Score =  335 bits (858), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 245/694 (35%), Positives = 367/694 (52%), Gaps = 86/694 (12%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFL-DNVREISSKGGLVSLQRQLLSQLL 77
           +R +GI GM G+GKTT+A+ V+D +S EF+AS F+ D  + I  KG    L+ Q L +  
Sbjct: 167 IRCVGIWGMPGIGKTTLAKAVFDQMSGEFDASCFIEDYSKAIQEKGVYCLLEEQFLKENA 226

Query: 78  KLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSR 137
             A  ++      + +L  +L  K+VL+V+DDV     ++S  G  +WFG  S IIITSR
Sbjct: 227 GGAGGTVTK----LSLLRDKLNNKRVLVVLDDVRSPLVVESFLGGFDWFGPKSLIIITSR 282

Query: 138 DEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLAL 197
           D+ + +   V+++Y+ HGLN  EALQLF+M A       Q   ++S ++I+YA G PLAL
Sbjct: 283 DKSVFRLCRVNQIYEVHGLNEKEALQLFSMCASIDDMAEQNLHEVSMKVIKYANGHPLAL 342

Query: 198 EVLGSFLSGRS-VDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGN 256
            + G  L G+    E  +   +L+  PP+  +D ++  +D L + EK IFLDIACFF+G 
Sbjct: 343 SLYGRELKGKKRPPEMETAFLQLKERPPNIFVDAIKSCYDTLNDREKDIFLDIACFFQGE 402

Query: 257 DRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGK 316
           + DYV   LEGCGF P +GI VL+EK                  +G+ I+ R++  +  +
Sbjct: 403 NVDYVMQVLEGCGFFPHVGIDVLVEKY-----------------VGRHIINRET-RQTKR 444

Query: 317 RSRLWKEEEVCHVLTE---------------STGTELVEGIVLDNYHHENEVYLCASAKA 361
           R RLW+   + ++L +               + G E +EG+ LD  +   ++       A
Sbjct: 445 RDRLWEPWSIKYLLEDNGEKENGEHKTTLERAQGPEEIEGMFLDTSNFSFDI----KPAA 500

Query: 362 FSKMTNLRLLKICNLQ---------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
           F  M NLRLLKI +           L   L  L N LRLL W  YPL+FLP N      +
Sbjct: 501 FDNMLNLRLLKIYSSNPEVHHVKNFLKGFLNSLPNELRLLHWENYPLQFLPQNFDPIHLV 560

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
           EI M YS++ +LW G K+L+ LK + L HS+ L+ + D   A NLE + L+GCTRL    
Sbjct: 561 EINMPYSQLKKLWGGTKNLEMLKTIRLCHSQQLVDIDDVLKAQNLEVIDLQGCTRLQSFP 620

Query: 473 PS-LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKS-----LPTTISGLKCLSTLD 526
            +  LLH  L I+N+  CT + + P   +  ++E LNL+      LP +I        L+
Sbjct: 621 ATGQLLH--LRIVNLSGCTEIKSFPE--IPPNIETLNLQGTGIIELPLSIIKPNYTELLN 676

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPV 585
           +       E P +   + +L +  L+  T++  +  S + L  L+ L LK+C  L  LP 
Sbjct: 677 L-----LAEIPGL-SGVSNLEQSDLKPLTSLMKMSTSNQNLGKLICLELKDCARLRSLP- 729

Query: 586 TVSNLKCLRSLKLSGCSKLKK---FPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL 642
            ++NL+ L+ L LSGCS+L+    FP+      +L EL+L GT++++VP   +L   LEL
Sbjct: 730 NMNNLELLKVLDLSGCSELETIQGFPQ------NLKELYLAGTAVRQVP---QLPQSLEL 780

Query: 643 LNLSDCKNLVRLPSSIIALKSLKT-LNLSGCFKL 675
            N   C   V L S  +  + L     LS CF L
Sbjct: 781 FNAHGC---VSLKSIRVDFEKLPVHYTLSNCFDL 811



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 93/183 (50%), Gaps = 45/183 (24%)

Query: 640 LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP 699
           LE+++L  C  L   P++   L  L+ +NLSGC ++++ PE    IE+L   ++ GT + 
Sbjct: 605 LEVIDLQGCTRLQSFPATG-QLLHLRIVNLSGCTEIKSFPEIPPNIETL---NLQGTGII 660

Query: 700 HSTSWYSYIPINLMRKSVA------LKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLC 753
                   +P+++++ +         ++P LSG+ +L +              SD+  L 
Sbjct: 661 E-------LPLSIIKPNYTELLNLLAEIPGLSGVSNLEQ--------------SDLKPLT 699

Query: 754 SLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRV---NGCASL 810
           SL          + + TS  +L KL+ +EL+DC RL+SLP +  N+  ++V   +GC+ L
Sbjct: 700 SL----------MKMSTSNQNLGKLICLELKDCARLRSLPNM-NNLELLKVLDLSGCSEL 748

Query: 811 VTL 813
            T+
Sbjct: 749 ETI 751



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 52/84 (61%), Gaps = 2/84 (2%)

Query: 229  DILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITV 287
            ++L++S+DGLQE++K +FL +A  F   D D V   +          G++VL ++ LI V
Sbjct: 1018 EVLRVSYDGLQEIDKALFLYLAGLFNDEDIDLVAPLIANIIDMDVSYGLKVLADRSLIRV 1077

Query: 288  HNN-TLWMHDLLQELGQQIVQRQS 310
             +N  + M++L +E+G++I+  +S
Sbjct: 1078 SSNGEIVMYNLQREMGKEILHTES 1101


>gi|357500293|ref|XP_003620435.1| Resistance protein [Medicago truncatula]
 gi|355495450|gb|AES76653.1| Resistance protein [Medicago truncatula]
          Length = 1062

 Score =  335 bits (858), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 206/578 (35%), Positives = 323/578 (55%), Gaps = 46/578 (7%)

Query: 4   RCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK 62
           R ++++ L+D  ++  V M+G+ G+GGLGK+T+AR +Y+ I  +F+   FL +VRE S+K
Sbjct: 226 RIQQVKLLLDKETNKGVHMVGLYGIGGLGKSTLARAIYNFIGDQFDGLCFLHDVRENSAK 285

Query: 63  GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGN 122
             L  LQ +LL + + L +  + +V +GI ++  RL RKK+LL++DDV ++ QL +LAG 
Sbjct: 286 NNLKHLQEKLLLKTIGL-EIKLDHVSEGIPIIKERLCRKKILLILDDVDNMNQLHALAGG 344

Query: 123 REWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQL 182
            +WFG GSR+IIT+RD+HLL +HG+   +   GLN  EAL+L    AFK+ +       +
Sbjct: 345 LDWFGRGSRVIITTRDKHLLSSHGIKSTHAVEGLNGTEALELLRWMAFKSDKVPSGYEDI 404

Query: 183 SARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELE 242
             R + Y+ GLPL +EV+GS L G+S+++W+STL+  +  P  EI  IL++S+D L+E E
Sbjct: 405 LNRAVAYSSGLPLVIEVVGSNLFGKSIEKWKSTLDGYDKIPNKEIQKILKVSYDALEEEE 464

Query: 243 KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVI-GIRVLIEKCLITV--HNNTLWMHDLLQ 299
           + +FLDIAC FKG     V + L     H +   + VL EK LI    ++  + +HDL++
Sbjct: 465 QSVFLDIACCFKGCGWADVKDILHAHYGHCITHHLEVLAEKSLIDRWEYDGCVGLHDLIE 524

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           ++G+++V+++SP+E G+RSRLW ++++ H L E+TGT  +E I ++   H  E  +    
Sbjct: 525 DMGKEVVRQESPKEPGERSRLWCQDDIVHALNENTGTSKIEMIYMN--FHSMESVIDQKG 582

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
            AF KMT L+ L I N    NGL+YL N LR+L W+G                    C  
Sbjct: 583 MAFKKMTKLKTLIIENGHFSNGLKYLPNSLRVLKWKG--------------------CLL 622

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
                    K    +KV+ L   E L  +PD +G  N+EK   + C  L  I  S+   N
Sbjct: 623 ESLSSSILSKKFQNMKVLTLDDCEYLTHIPDVSGLSNIEKFSFKFCRNLITIDDSIGHQN 682

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
           KL  ++   C+ L   P                P    GL  L  L++S  +    FPE+
Sbjct: 683 KLEFISAIGCSKLKRFP----------------PL---GLASLKELELSFCVSLNSFPEL 723

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNC 577
           +  M ++  +    T+I  LP S + LS L  ++++ C
Sbjct: 724 LCKMTNIKRILFVNTSIGELPSSFQNLSELNDISIERC 761



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 18/228 (7%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
           ++ L L  C  L   P+ V  + ++ +  F    ++  +  SI    KLE ++   C  L
Sbjct: 637 MKVLTLDDCEYLTHIPD-VSGLSNIEKFSFKFCRNLITIDDSIGHQNKLEFISAIGCSKL 695

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYI 708
            R P   + L SLK L LS C  L + PE L ++ +++ +    T++   P S    S +
Sbjct: 696 KRFPP--LGLASLKELELSFCVSLNSFPELLCKMTNIKRILFVNTSIGELPSSFQNLSEL 753

Query: 709 PINLMRKSVALKLPSLSG------LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK 762
               + +   L+ P  +         ++ +L+L +CNL +  LP  +    ++K L LS 
Sbjct: 754 NDISIERCGMLRFPKHNDKINSIVFSNVTQLSLQNCNLSDECLPILLKWFVNVKRLDLSH 813

Query: 763 N-SFVSLPTSIT--HLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGC 807
           N +F  LP  +   HL K+   E + CK L+ +  +PPN+ ++    C
Sbjct: 814 NFNFNILPECLNECHLMKIF--EFDCCKSLEEIRGIPPNLEELSAYKC 859


>gi|357496097|ref|XP_003618337.1| Resistance protein [Medicago truncatula]
 gi|355493352|gb|AES74555.1| Resistance protein [Medicago truncatula]
          Length = 1205

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 255/718 (35%), Positives = 384/718 (53%), Gaps = 77/718 (10%)

Query: 1    MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            ++S+  K++ LMD G  D  +MIGI G+GG+GKTT+A+ +Y+ I  +F+   FL +VREI
Sbjct: 341  LESQVLKVKSLMDVGCHDGAQMIGIHGIGGIGKTTLAKEIYNRIYDQFDKVCFLHDVREI 400

Query: 60   -SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
             S+K GLV LQ QLL Q + L D  + +V +GI  +  RLQ+KKVLL++DDV    QL++
Sbjct: 401  CSTKYGLVHLQEQLLFQTVGLNDK-LGHVSEGIQFIKERLQQKKVLLILDDVDQPDQLKA 459

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            LAG+  WF  GS++I+T+RD+HLL ++GV++ Y+ +GLN  +AL L   K  K+ +    
Sbjct: 460  LAGDLNWFCGGSKVIVTTRDKHLLASYGVEKTYEVNGLNEKDALDLLRWKVCKSNKIGSS 519

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
               +     RY+ GLPLALEV+GS LSG+S DEW STL R E   P  I  IL++SFD L
Sbjct: 520  YEGILEHASRYSSGLPLALEVVGSDLSGKSKDEWSSTLARYERTVPKNIQQILKVSFDAL 579

Query: 239  QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIG-IRVLIEKCLITVHNNTLWMHDL 297
            QE +K +FLDIACFFKG   +   + L+    + +   I VL+EK LI +    + +HDL
Sbjct: 580  QEEDKSLFLDIACFFKGCRLEEFQDILDAHYTYCIKNHIGVLVEKSLIKIIGGCVTLHDL 639

Query: 298  LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
            ++E+G++IV+++SP+E GKRSRLW  E++  VL  ++GT  +E + L N+    E  +  
Sbjct: 640  IEEMGKEIVRQESPKEPGKRSRLWSHEDIVPVLHANSGTRKIEILYL-NFSLSKEEEVEW 698

Query: 358  SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLK-----FLPSNLQMDK-- 410
                  KM NLR + I N     G ++L N LR+L W  YP +     F P  L + +  
Sbjct: 699  KGDELKKMENLRTIIIRNCPFSKGCQHLPNGLRVLDWPKYPSENFTSDFFPRKLSICRLR 758

Query: 411  ----TIEIYMCYSRIGELWK-----------GIKHLDK-------------LKVMILSHS 442
                T   +   S++G ++             I H                ++ + L H+
Sbjct: 759  ESSLTTFEFPSSSKVGVMFSFSSSCVPTHYCKITHFFSSLSLFYFLQKFLCMRELNLDHN 818

Query: 443  ENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMK 502
            ++L ++ D +G  NLE L    C+ L  IH S+   NKL ILN+  C+ L + P  I + 
Sbjct: 819  QSLTQILDISGLLNLEILSFRDCSNLITIHNSIGFLNKLKILNVTGCSKLSSFP-PIKLT 877

Query: 503  SLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLS 562
            SL KL L                        + FPEI+  M+H++ + L GT+I   P S
Sbjct: 878  SLLKLELSHCNN------------------LKSFPEILGDMKHITYIELVGTSIEQFPFS 919

Query: 563  IELLSGLVLLNLK-----------NCRSLEILPVTV-SNLKCLRSLKLSGCSKLKKFPEI 610
             + LS +  L +            N R  +I   TV SN++ L    L  C+    F   
Sbjct: 920  FQNLSMVHTLQIFGSGKPHNLSWINARENDIPSSTVYSNVQFLH---LIECNPSNDF--- 973

Query: 611  VRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
            +R   ++  L L G+++  +   ++    L+ L L+DCK L  +     +LK L  L 
Sbjct: 974  LRRFVNVEVLDLSGSNLTVLSKCLKECHFLQRLCLNDCKYLQEITGIPPSLKRLSALQ 1031



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 90/386 (23%), Positives = 153/386 (39%), Gaps = 104/386 (26%)

Query: 634  IELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK------------------- 674
            I  L  LE+L+  DC NL+ + +SI  L  LK LN++GC K                   
Sbjct: 827  ISGLLNLEILSFRDCSNLITIHNSIGFLNKLKILNVTGCSKLSSFPPIKLTSLLKLELSH 886

Query: 675  ---LENVPETLGQIESLEELDISGTAV-----------------------PHSTSWYSYI 708
               L++ PE LG ++ +  +++ GT++                       PH+ SW    
Sbjct: 887  CNNLKSFPEILGDMKHITYIELVGTSIEQFPFSFQNLSMVHTLQIFGSGKPHNLSW---- 942

Query: 709  PINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSD--IGNLCSLKELYLSKNSFV 766
             IN     +    PS +   +++ L+L +CN      PS+  +    +++ L LS ++  
Sbjct: 943  -INARENDI----PSSTVYSNVQFLHLIECN------PSNDFLRRFVNVEVLDLSGSNLT 991

Query: 767  SLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTM 826
             L   +     L  + L DCK LQ +  +PP+++++    C SL +       C+S    
Sbjct: 992  VLSKCLKECHFLQRLCLNDCKYLQEITGIPPSLKRLSALQCNSLTS------SCRS---- 1041

Query: 827  IACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTR 886
                              +L ++L     T   L+     + +PEWF +Q+EG SI+   
Sbjct: 1042 -----------------MLLSQHLHEDGGTEFSLA---GSARVPEWFDHQSEGPSIS--- 1078

Query: 887  PSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAG 946
                + + +    A+        N   N+ F S   H L  +     + I   D      
Sbjct: 1079 ---FWFRGRFPSIALFVASLSTDNRHPNSDFLSLTAH-LRTYTDGIEFDINSVDLNLVIQ 1134

Query: 947  SDHLWLLYLSRQTCYDIRLPLESNLE 972
             DH +L  L +Q      + LES+LE
Sbjct: 1135 PDHTYLYDLRQQV-----MELESDLE 1155


>gi|357499453|ref|XP_003620015.1| Resistance protein [Medicago truncatula]
 gi|355495030|gb|AES76233.1| Resistance protein [Medicago truncatula]
          Length = 1065

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 220/607 (36%), Positives = 343/607 (56%), Gaps = 61/607 (10%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + SR ++++ L+D G  D V M+GI G+GG GK+T+AR +Y+ ++ +FE   FL+ VRE 
Sbjct: 199 LQSRVQQVKSLLDEGPDDGVHMVGIYGIGGSGKSTLARAIYNFVADQFEGLCFLEQVREN 258

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+   L   Q  LLS+ L+L    + +V +GI ++  RL RKK+LL++DDV ++KQL +L
Sbjct: 259 SASNSLKRFQEMLLSKTLQLKIK-LADVSEGISIIKERLCRKKILLILDDVDNMKQLNAL 317

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG GSR+IIT+RD+HLL  H +++ Y   GLN  EAL+L    AFK  +     
Sbjct: 318 AGGVDWFGPGSRVIITTRDKHLLACHEIEKTYAVKGLNVTEALELLRWMAFKNDKVPSSY 377

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            ++  R++ YA GLP+ +E++GS L G++++E ++TL+  E  P  EI  IL++S+D L+
Sbjct: 378 EKILNRVVAYASGLPVVIEIVGSNLFGKNIEECKNTLDWYEKIPNKEIQRILKVSYDSLE 437

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPV-IGIRVLIEKCLIT--VHNNTLWMHD 296
           E E+ +FLDIAC FKG   + V   L     H +   + VL+EKCLI    +++ + +H+
Sbjct: 438 EEEQSVFLDIACCFKGCKWEKVKEILHAHYGHCINHHVEVLVEKCLIDHFEYDSHVSLHN 497

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           L++ +G+++V+ +SP E GKRSRLW E+++  VL E+TGT  +E I ++   H  E  + 
Sbjct: 498 LIENMGKELVRLESPFEPGKRSRLWFEKDIFEVLEENTGTSKIEMIYMN--LHSMESVID 555

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            + KAF KMT+L+     N      L+YL   LR++  +G  L+  PS+  ++K +E   
Sbjct: 556 KNGKAFKKMTHLKTFITENGYHIQSLKYLPRSLRVM--KGCILR-SPSSSSLNKKLE--- 609

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
                            +KV+I  + ++LI  PD +  PNLEK     C  L  IH SL 
Sbjct: 610 ----------------NMKVLIFDNCQDLIYTPDVSWLPNLEKFSFARCHNLVTIHNSLR 653

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
             N+L ILN + C  L + P            L+S P+       L  L++S     + F
Sbjct: 654 YLNRLEILNAEGCEKLESFPP-----------LQS-PS-------LQNLELSNCKSLKSF 694

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKC--LR 594
           PE++  M ++  + L+ T+I   P S + LS            L  L ++  NLK   LR
Sbjct: 695 PELLCKMTNIKSILLKETSIGEFPFSFQNLS-----------ELRHLTISGDNLKINLLR 743

Query: 595 SLKLSGC 601
            L+L  C
Sbjct: 744 ILRLDEC 750



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 2/85 (2%)

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
           S+  L+ L +LN + C  LE  P   S    L++L+LS C  LK FPE++  M ++  + 
Sbjct: 651 SLRYLNRLEILNAEGCEKLESFPPLQS--PSLQNLELSNCKSLKSFPELLCKMTNIKSIL 708

Query: 622 LDGTSIKEVPSSIELLTKLELLNLS 646
           L  TSI E P S + L++L  L +S
Sbjct: 709 LKETSIGEFPFSFQNLSELRHLTIS 733



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 16/181 (8%)

Query: 566 LSGLVLLNLKNCRSLEILPVTVSNLK-CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG 624
           L   +  N  + +SL+ LP ++  +K C+  L+    S L K       ++++  L  D 
Sbjct: 567 LKTFITENGYHIQSLKYLPRSLRVMKGCI--LRSPSSSSLNK------KLENMKVLIFDN 618

Query: 625 TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQ 684
                    +  L  LE  + + C NLV + +S+  L  L+ LN  GC KLE+ P    Q
Sbjct: 619 CQDLIYTPDVSWLPNLEKFSFARCHNLVTIHNSLRYLNRLEILNAEGCEKLESFPPL--Q 676

Query: 685 IESLEELDISG----TAVPHSTSWYSYIPINLMRKSVALKLP-SLSGLCSLRKLNLTDCN 739
             SL+ L++S      + P      + I   L++++   + P S   L  LR L ++  N
Sbjct: 677 SPSLQNLELSNCKSLKSFPELLCKMTNIKSILLKETSIGEFPFSFQNLSELRHLTISGDN 736

Query: 740 L 740
           L
Sbjct: 737 L 737


>gi|255561496|ref|XP_002521758.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223538971|gb|EEF40568.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 876

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 210/505 (41%), Positives = 295/505 (58%), Gaps = 31/505 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DSR E++  ++    SDVR+IG+ GMGG+GKTT+A  ++D IS ++E+S FL NVRE  
Sbjct: 189 IDSRLEQIESMLCLDMSDVRIIGVWGMGGIGKTTLAGAIFDQISAQYESSYFLGNVREQL 248

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL- 119
            +  L  L+ +L S++L+  +        G   L  RL RKK+L+V+DDV    QLQ L 
Sbjct: 249 KRCLLAELREKLFSKILEEKNLDTRTPNLGNTFLKDRLSRKKILVVLDDVDSTMQLQELL 308

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G  + FG GSRII+TSRD+ +LK + VDE+YK  GLN  EALQLF++ AFK   P  + 
Sbjct: 309 PGQHDLFGPGSRIIVTSRDKQVLK-NVVDEIYKVEGLNQHEALQLFSLNAFKKNSPTNDR 367

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V++S R+  YA G PLAL VLG  L  +S ++W S LE+L   P  EI  +L+ S+DGL 
Sbjct: 368 VEISTRVADYAKGNPLALRVLGCALFDKSKEDWESALEKLRNVPNGEIQKVLRFSYDGLD 427

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
             E+ IFLDIACFF+G DR+Y T  L+GC       I  LI+K L++V+ + L MHDLLQ
Sbjct: 428 REERNIFLDIACFFRGEDRNYATKILDGCYSSVGFIISTLIDKSLVSVYRSKLEMHDLLQ 487

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E G  IV R+ P EL KRSRLW  ++V +VLT+  GT+ +EGI LD      E++L    
Sbjct: 488 ETGWSIV-REEP-ELEKRSRLWNPKDVYYVLTKKKGTKAIEGISLD-LSTTREMHL--EC 542

Query: 360 KAFSKMTNLRLLKI--------C--NLQLPN-GLEYLSNRLRLLGWRGYPLKFLPSNLQM 408
            AF+ M +LR+LK         C   + LP  GL+ LS+ LR L W  +P + LP     
Sbjct: 543 DAFAGMDHLRILKFYTSNSSIGCKHKMHLPGCGLQSLSDELRYLQWHKFPSRSLPPKFCA 602

Query: 409 DKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPNLEKLILEGCTR 467
           +  + + + +S I +LWKG++         L + + L+ +P        L  + L  C  
Sbjct: 603 ENLVVLDLPHSNIEQLWKGVQ---------LEYCKKLVSLPSCMHKLSQLRSIYLSYCKS 653

Query: 468 LYEIHPSLLLHNKLIILNMKDCTSL 492
           L E+     L   L +L   DC S+
Sbjct: 654 LRELPE---LPKSLKVLEAYDCRSM 675



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 5/142 (3%)

Query: 766 VSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDST 825
           VSLP+ +  LS+L +I L  CK L+ LP+LP +++ +    C S+     + K    +  
Sbjct: 631 VSLPSCMHKLSQLRSIYLSYCKSLRELPELPKSLKVLEAYDCRSMENFSSSSKCNFKNLC 690

Query: 826 MIAC--LDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSIT 883
              C  LD        + A S ++         +  + ++  GSEIPE F  Q  G S++
Sbjct: 691 FTNCFKLDQKACSEINANAESTVQLLTTKYRECQDQVRILFQGSEIPECFNDQKVGFSVS 750

Query: 884 VTRPSNLYNKKKLVGYAICCVF 905
           +  PSN +   +  G A C VF
Sbjct: 751 MQLPSNWH---QFEGIAFCIVF 769


>gi|356522390|ref|XP_003529829.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1086

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 233/630 (36%), Positives = 357/630 (56%), Gaps = 43/630 (6%)

Query: 4   RCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKG 63
           R   +  L+   ++DVR+IGI GMGG+GKTTIA+ VY+ +  E+E   FL N+RE S + 
Sbjct: 232 RIAHVESLLQLEATDVRVIGIWGMGGIGKTTIAQEVYNKLCFEYEGCCFLANIREESGRH 291

Query: 64  GLVSLQRQLLSQLLKLADNSIWNVFDGI-DMLGSRLQRKKVLLVIDDVVDVKQLQSLAGN 122
           G++SL+++L S LL   D  I +  +G+   +  RL+R KVL+++DDV D +QL+ LAG 
Sbjct: 292 GIISLKKKLFSTLLGEEDLKI-DTPNGLPQYVERRLRRIKVLIILDDVNDSEQLEILAGT 350

Query: 123 REWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQL 182
           R+WFG GSRIIIT+RD+ +L     + +Y+   LN+DE+L+LFN+ AFK     +E  +L
Sbjct: 351 RDWFGLGSRIIITTRDKQVLAKESAN-IYEVETLNFDESLRLFNLNAFKEVHLEREYHEL 409

Query: 183 SARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELE 242
           S +++ YA G+PL L+VLG  L G+  + W S LERL+     ++ DI+++S++ L + E
Sbjct: 410 SKKVVNYAQGIPLVLKVLGHLLHGKEKEIWESQLERLKKVQSKKVHDIIKLSYNDLDQDE 469

Query: 243 KKIFLDIACFFKGND--RDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQ 299
           KKIFLDIACFF G +   + +   L+   +    G+  L +K LI+V   N + MH+++Q
Sbjct: 470 KKIFLDIACFFDGLNLKVNKIKILLKDHDYSVAAGLERLKDKALISVSQENIVTMHNIIQ 529

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E   QI +++S E+   +SRL   ++V  VL  + G E +  IV+ N     ++ L  + 
Sbjct: 530 ETAWQIARQESIEDPRSQSRLLDPDDVYLVLKYNKGNEAIRSIVI-NLSGIKQLQL--NP 586

Query: 360 KAFSKMTNLRLLKICN------------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
           + F+KM+ L  L   N            L LP GLE LSN LR L W  YPL+ LPS   
Sbjct: 587 QVFAKMSKLYFLDFYNKGSCSCLREQGGLYLPQGLESLSNELRYLRWTHYPLESLPSKFS 646

Query: 408 MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
            +  +E+ + YSR+ +LW+ +  L  ++++IL  S  L  +PD + A NL+ + L  C  
Sbjct: 647 AENLVELNLPYSRVKKLWQAVPDLVNMRILILHSSTQLKELPDLSKATNLKVMDLRFCVG 706

Query: 468 LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDV 527
           L  +HPS+    KL  L +  C SL +L   I + SL  L+L        G   L    V
Sbjct: 707 LTSVHPSVFSLKKLEKLYLGGCFSLRSLRSNIHLDSLRYLSL-------YGCMSLKYFSV 759

Query: 528 SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
           +               +++  L+LE T+I+ LP SI L S L  L L     +E LP ++
Sbjct: 760 TS--------------KNMVRLNLELTSIKQLPSSIGLQSKLEKLRLAYT-YIENLPTSI 804

Query: 588 SNLKCLRSLKLSGCSKLKKFPEIVRSMKDL 617
            +L  LR L +  C +L+  PE+  S++ L
Sbjct: 805 KHLTKLRHLDVRHCRELRTLPELPPSLETL 834



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 144/288 (50%), Gaps = 39/288 (13%)

Query: 602 SKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           S++KK  + V  + ++  L L   T +KE+P  +   T L++++L  C  L  +  S+ +
Sbjct: 658 SRVKKLWQAVPDLVNMRILILHSSTQLKELPD-LSKATNLKVMDLRFCVGLTSVHPSVFS 716

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK 720
           LK L+ L L GCF L ++   +  ++SL  L + G     S  ++S    N++R  + L+
Sbjct: 717 LKKLEKLYLGGCFSLRSLRSNI-HLDSLRYLSLYGCM---SLKYFSVTSKNMVR--LNLE 770

Query: 721 LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLN 780
           L S+                    LPS IG    L++L L+     +LPTSI HL+KL +
Sbjct: 771 LTSIK------------------QLPSSIGLQSKLEKLRLAYTYIENLPTSIKHLTKLRH 812

Query: 781 IELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLL---DALKLCKSDSTMIACLDSLKLLG 837
           +++  C+ L++LP+LPP++  +   GC SL T++    A +  K +   +A  + LK L 
Sbjct: 813 LDVRHCRELRTLPELPPSLETLDARGCVSLETVMFPSTAGEQLKENKKRVAFWNCLK-LD 871

Query: 838 NKSLAFSMLREYLEAVSNTRQHLSV---------VVPGSEIPEWFMYQ 876
             SL    L   +  +    QHLS          V PGS++PEW +++
Sbjct: 872 EHSLKAIELNAQINMMKFAHQHLSTFGDAHQGTYVYPGSKVPEWLVHK 919


>gi|357471469|ref|XP_003606019.1| Resistance protein [Medicago truncatula]
 gi|357499467|ref|XP_003620022.1| Resistance protein [Medicago truncatula]
 gi|355495037|gb|AES76240.1| Resistance protein [Medicago truncatula]
 gi|355507074|gb|AES88216.1| Resistance protein [Medicago truncatula]
          Length = 822

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 220/607 (36%), Positives = 343/607 (56%), Gaps = 61/607 (10%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + SR ++++ L+D G  D V M+GI G+GG GK+T+AR +Y+ ++ +FE   FL+ VRE 
Sbjct: 199 LQSRVQQVKSLLDEGPDDGVHMVGIYGIGGSGKSTLARAIYNFVADQFEGLCFLEQVREN 258

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+   L   Q  LLS+ L+L    + +V +GI ++  RL RKK+LL++DDV ++KQL +L
Sbjct: 259 SASNSLKRFQEMLLSKTLQLKI-KLADVSEGISIIKERLCRKKILLILDDVDNMKQLNAL 317

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG GSR+IIT+RD+HLL  H +++ Y   GLN  EAL+L    AFK  +     
Sbjct: 318 AGGVDWFGPGSRVIITTRDKHLLACHEIEKTYAVKGLNVTEALELLRWMAFKNDKVPSSY 377

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            ++  R++ YA GLP+ +E++GS L G++++E ++TL+  E  P  EI  IL++S+D L+
Sbjct: 378 EKILNRVVAYASGLPVVIEIVGSNLFGKNIEECKNTLDWYEKIPNKEIQRILKVSYDSLE 437

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPV-IGIRVLIEKCLIT--VHNNTLWMHD 296
           E E+ +FLDIAC FKG   + V   L     H +   + VL+EKCLI    +++ + +H+
Sbjct: 438 EEEQSVFLDIACCFKGCKWEKVKEILHAHYGHCINHHVEVLVEKCLIDHFEYDSHVSLHN 497

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           L++ +G+++V+ +SP E GKRSRLW E+++  VL E+TGT  +E I ++   H  E  + 
Sbjct: 498 LIENMGKELVRLESPFEPGKRSRLWFEKDIFEVLEENTGTSKIEMIYMN--LHSMESVID 555

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            + KAF KMT+L+     N      L+YL   LR++  +G  L+  PS+  ++K +E   
Sbjct: 556 KNGKAFKKMTHLKTFITENGYHIQSLKYLPRSLRVM--KGCILRS-PSSSSLNKKLE--- 609

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
                            +KV+I  + ++LI  PD +  PNLEK     C  L  IH SL 
Sbjct: 610 ----------------NMKVLIFDNCQDLIYTPDVSWLPNLEKFSFARCHNLVTIHNSLR 653

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
             N+L ILN + C  L + P            L+S P+       L  L++S     + F
Sbjct: 654 YLNRLEILNAEGCEKLESFPP-----------LQS-PS-------LQNLELSNCKSLKSF 694

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKC--LR 594
           PE++  M ++  + L+ T+I   P S + LS            L  L ++  NLK   LR
Sbjct: 695 PELLCKMTNIKSILLKETSIGEFPFSFQNLS-----------ELRHLTISGDNLKINLLR 743

Query: 595 SLKLSGC 601
            L+L  C
Sbjct: 744 ILRLDEC 750



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 2/85 (2%)

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
           S+  L+ L +LN + C  LE  P   S    L++L+LS C  LK FPE++  M ++  + 
Sbjct: 651 SLRYLNRLEILNAEGCEKLESFPPLQS--PSLQNLELSNCKSLKSFPELLCKMTNIKSIL 708

Query: 622 LDGTSIKEVPSSIELLTKLELLNLS 646
           L  TSI E P S + L++L  L +S
Sbjct: 709 LKETSIGEFPFSFQNLSELRHLTIS 733



 Score = 40.4 bits (93), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 16/181 (8%)

Query: 566 LSGLVLLNLKNCRSLEILPVTVSNLK-CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG 624
           L   +  N  + +SL+ LP ++  +K C+  L+    S L K       ++++  L  D 
Sbjct: 567 LKTFITENGYHIQSLKYLPRSLRVMKGCI--LRSPSSSSLNK------KLENMKVLIFDN 618

Query: 625 TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQ 684
                    +  L  LE  + + C NLV + +S+  L  L+ LN  GC KLE+ P    Q
Sbjct: 619 CQDLIYTPDVSWLPNLEKFSFARCHNLVTIHNSLRYLNRLEILNAEGCEKLESFPPL--Q 676

Query: 685 IESLEELDISG----TAVPHSTSWYSYIPINLMRKSVALKLP-SLSGLCSLRKLNLTDCN 739
             SL+ L++S      + P      + I   L++++   + P S   L  LR L ++  N
Sbjct: 677 SPSLQNLELSNCKSLKSFPELLCKMTNIKSILLKETSIGEFPFSFQNLSELRHLTISGDN 736

Query: 740 L 740
           L
Sbjct: 737 L 737


>gi|298378158|gb|ADI80539.1| recognition of Peronospora parasitica 1 [Arabidopsis thaliana]
          Length = 1154

 Score =  333 bits (853), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 255/730 (34%), Positives = 362/730 (49%), Gaps = 72/730 (9%)

Query: 18  DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE------ISSKGGLVSLQRQ 71
           +VRMIGI G  G+GKTTIA  ++D  S  F  +  + ++RE      ++ +   + LQ Q
Sbjct: 285 EVRMIGIWGPPGIGKTTIAACMFDRFSSRFPFAAIMTDIRECYPRLCLNERNAQLKLQEQ 344

Query: 72  LLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSR 131
           +LSQ+    D  I      + +   RL+ KKV LV+D+V  + QL +LA    WFG GSR
Sbjct: 345 MLSQIFNQKDTMI----SHLGVAPERLKDKKVFLVLDEVGHLGQLDALAKETRWFGPGSR 400

Query: 132 IIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAG 191
           IIIT+ D  +LK HG++ VYK    + DEA Q+F M AF   QP +    L+  +   AG
Sbjct: 401 IIITTEDLGVLKAHGINHVYKVKSPSNDEAFQIFCMNAFGQKQPCEGFWNLAWEVTCLAG 460

Query: 192 GLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIAC 251
            LPL L+VLGS L G S  EW  TL RL+      I  I+Q SFD L + +K +FL IAC
Sbjct: 461 KLPLGLKVLGSALRGMSKPEWERTLPRLKTSLDGNIGSIIQFSFDALCDEDKYLFLYIAC 520

Query: 252 FFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQ-S 310
            F       V   L         GI VL +K LI+     + MH LL + G++  ++Q  
Sbjct: 521 LFNNESTTKVEEVLANKFLDVGQGIHVLAQKSLISFEGEEIQMHTLLVQFGRETSRKQFV 580

Query: 311 PEELGKRSRLWKEEEVCHVLTEST-GTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLR 369
                K   L  E ++C VL + T  +    GI LD    +NE     S KA  +M + +
Sbjct: 581 HHRYTKHQLLVGERDICEVLNDDTIDSRCFIGINLD--LSKNEERWNISEKALERMHDFQ 638

Query: 370 LLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRI 421
            ++I         +L L + L Y S +LR L W GY    LPS    +  +E+ M +S++
Sbjct: 639 FVRIGAFYQRKRLSLALQD-LIYHSPKLRSLKWYGYQNICLPSTFNPEFLVELDMSFSKL 697

Query: 422 GELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKL 481
             LW+G K L  LK M LS+S  L  +P+ + A NLE+L L  C+ L E+ PS     KL
Sbjct: 698 WNLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELRLSNCSSLVEL-PSFGNATKL 756

Query: 482 IILNMKDCTSLITLPGKILMKSLEKLNLKS------LPTTISGLKCLSTLDVSGDLKFRE 535
             L++++C SL+ LP       L KL L+       LP +I     L  LD++G      
Sbjct: 757 EKLDLENCRSLVKLPAIENATKLRKLKLEDCSSLIELPLSIGTATNLKKLDMNGCSSLVR 816

Query: 536 FPEIVEHMEHLSELHLEGTA-IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
            P  +  M  L    L   + +  LP SI  L  L LL ++ C  LE LP  + NL  LR
Sbjct: 817 LPSSIGDMTSLEGFDLSNCSNLVELPSSIGNLRKLALLLMRGCSKLETLPTNI-NLISLR 875

Query: 595 SLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSI-------------------- 634
            L L+ CS+LK FPEI      +  L+L GT+IKEVP SI                    
Sbjct: 876 ILDLTDCSRLKSFPEIS---THIDSLYLIGTAIKEVPLSIMSWSPLADFQISYFESLKEF 932

Query: 635 ----ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC---FKLENVPETLGQI-- 685
               +++TKL+L      K++  +P  +  +  L+ L L+ C     L  +P++L  +  
Sbjct: 933 PHAFDIITKLQL-----SKDIQEVPPWVKRMSRLRDLRLNNCNNLVSLPQLPDSLAYLYA 987

Query: 686 ---ESLEELD 692
              +SLE LD
Sbjct: 988 DNCKSLERLD 997



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 172/385 (44%), Gaps = 61/385 (15%)

Query: 527  VSGDLKFREFPEIVEHMEHLSELHL----EGTAIRGLPLSIELLSGLVLLNLKNCRSLEI 582
            V  D+ F +   + E  + L  L        + ++ LP ++   + L  L L NC SL  
Sbjct: 688  VELDMSFSKLWNLWEGTKQLRNLKWMDLSYSSYLKELP-NLSTATNLEELRLSNCSSLVE 746

Query: 583  LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL 642
            LP +  N   L  L L  C  L K P I  + K       D +S+ E+P SI   T L+ 
Sbjct: 747  LP-SFGNATKLEKLDLENCRSLVKLPAIENATKLRKLKLEDCSSLIELPLSIGTATNLKK 805

Query: 643  LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHST 702
            L+++ C +LVRLPSSI  + SL+  +LS C  L  +P ++G +  L  L           
Sbjct: 806  LDMNGCSSLVRLPSSIGDMTSLEGFDLSNCSNLVELPSSIGNLRKLALL----------- 854

Query: 703  SWYSYIPINLMRKSVALK-LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLS 761
                     LMR    L+ LP+   L SLR L+LTDC+ ++ + P    ++ S   LYL 
Sbjct: 855  ---------LMRGCSKLETLPTNINLISLRILDLTDCSRLK-SFPEISTHIDS---LYLI 901

Query: 762  KNSFVSLPTSITHLSKLLNIELEDCKRLQSLP----------------QLPP------NI 799
              +   +P SI   S L + ++   + L+  P                ++PP       +
Sbjct: 902  GTAIKEVPLSIMSWSPLADFQISYFESLKEFPHAFDIITKLQLSKDIQEVPPWVKRMSRL 961

Query: 800  RQVRVNGCASLVT---LLDALKL-----CKSDSTMIACLDSLKLLGNKSLAFSMLREYLE 851
            R +R+N C +LV+   L D+L       CKS   +  C ++ ++       F + +E  +
Sbjct: 962  RDLRLNNCNNLVSLPQLPDSLAYLYADNCKSLERLDCCFNNPEISLYFPNCFKLNQEARD 1021

Query: 852  AVSNTRQHLSVVVPGSEIPEWFMYQ 876
             + +T      ++PG+++P  F ++
Sbjct: 1022 LIMHTSTRNFAMLPGTQVPACFNHR 1046



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 24/150 (16%)

Query: 678 VPETLGQIESLEELDIS---------GTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLC 728
           +P T    E L ELD+S         GT    +  W     ++L   S   +LP+LS   
Sbjct: 678 LPSTFNP-EFLVELDMSFSKLWNLWEGTKQLRNLKW-----MDLSYSSYLKELPNLSTAT 731

Query: 729 SLRKLNLTDC-NLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELEDC 786
           +L +L L++C +L+E  LPS  GN   L++L L    S V LP +I + +KL  ++LEDC
Sbjct: 732 NLEELRLSNCSSLVE--LPS-FGNATKLEKLDLENCRSLVKLP-AIENATKLRKLKLEDC 787

Query: 787 KRLQSLP---QLPPNIRQVRVNGCASLVTL 813
             L  LP       N++++ +NGC+SLV L
Sbjct: 788 SSLIELPLSIGTATNLKKLDMNGCSSLVRL 817


>gi|357486563|ref|XP_003613569.1| Disease resistance-like protein [Medicago truncatula]
 gi|355514904|gb|AES96527.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1082

 Score =  333 bits (853), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 264/736 (35%), Positives = 394/736 (53%), Gaps = 80/736 (10%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR  ++  L+   S++ V M+GI G+GG+GKTT+AR +Y+LI+ +FE   FL +VRE 
Sbjct: 209 LESRLLQVNSLLSVESNNGVYMVGIHGIGGIGKTTLARAIYNLIADQFECLCFLHDVREN 268

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           SSK GL  LQ +LLS+ + L D  + +V +GI ++  RLQ+KKVLL++DDV + KQLQ +
Sbjct: 269 SSKHGLEHLQERLLSKTIGL-DIKLGHVSEGIPIIKQRLQQKKVLLILDDVDEQKQLQVM 327

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G  +WFG GSR+IIT+RD+HLL +HG+D +Y+  GLN +EAL+L   K FK  +     
Sbjct: 328 VGEPDWFGPGSRVIITTRDKHLLTSHGIDRIYEVDGLNGEEALELLRWKTFKNNKVDSSF 387

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +   ++ YA GLPLALEV+GS L G++++EW+ST +R E  P   I  IL++SFD L+
Sbjct: 388 EYILKYVVTYASGLPLALEVVGSNLFGKNIEEWKSTFDRYEWIPGKRIHKILKVSFDSLE 447

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIG--IRVLIEKCLITVHN-NTLWMHD 296
           E EK +FLDIAC FKG D   V  F+    +   I   I VL+EK LI ++    + +H 
Sbjct: 448 EDEKSVFLDIACCFKGYDLTEV-EFILCAHYGKCIKYHIGVLVEKSLIKINQWGYVTLHH 506

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           L++++G++IV+++SP+  GKRSRLW  E++  VL E+ GT  +E + LD    E  V   
Sbjct: 507 LIEDMGKEIVRKESPKHPGKRSRLWFHEDIVQVLEENMGTTEIEIVYLDFPLFEEVVEW- 565

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK------ 410
                F KM NL+ L I N     G ++L N LR+L W  YP   +PSN    K      
Sbjct: 566 -KGDEFKKMINLKTLIIKNGHFSKGPKHLPNSLRVLEWHRYPSLSIPSNFYQKKLSICKL 624

Query: 411 ------TIEIY----MCYSRIGELWKGIKH-LDKLKVMILSHSEN-----------LIRM 448
                 T E++    +C +    L    K  L  + V+IL    N           L  +
Sbjct: 625 GESFFTTFELHGSLKVCVNEFISLVLYTKTILTFIIVLILQKFVNMRELNLDNCKYLTHI 684

Query: 449 PDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN 508
            D +  PNLEK+    C  L  I  S+   NKL I+    C  L++ P  + + SL++L 
Sbjct: 685 FDVSCLPNLEKISFRHCENLMTIDSSVGFLNKLKIIRADGCLKLMSFP-PMELTSLQRLE 743

Query: 509 LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSG 568
           L    +    L+C              FPEI+  ME+++E+ LEGT+I  L  S + L+G
Sbjct: 744 L----SFCDSLEC--------------FPEILGEMENITEIVLEGTSIEELSYSFQNLTG 785

Query: 569 LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG-----------CSKLKKFPEIVRSMK-D 616
           L  L ++    L  LP  +  +  L  + + G            S      EI+R    +
Sbjct: 786 LRKLQIRRSGVLR-LPSNILMMPKLSYILVEGILLLPNKNDNLSSSTSSNVEILRLPNCN 844

Query: 617 LSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCF--- 673
           LS+ FL         +S+     +  L+LS   +   LP  I     L TLNL+ C    
Sbjct: 845 LSDEFLQ--------TSLAWFANVIHLDLSR-NSFTILPEFIKECHFLITLNLNDCTCLR 895

Query: 674 KLENVPETLGQIESLE 689
           ++  +P  L ++ +L+
Sbjct: 896 EIRGIPPNLKRLSALQ 911



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 147/332 (44%), Gaps = 70/332 (21%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
           +R L L  C  L    + V  + +L ++ F    ++  + SS+  L KL+++    C  L
Sbjct: 670 MRELNLDNCKYLTHIFD-VSCLPNLEKISFRHCENLMTIDSSVGFLNKLKIIRADGCLKL 728

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPIN 711
           +  P   + L SL+ L LS C  LE  PE LG++E++ E+ + GT++   +  YS+  + 
Sbjct: 729 MSFPP--MELTSLQRLELSFCDSLECFPEILGEMENITEIVLEGTSIEELS--YSFQNLT 784

Query: 712 LMRK-----SVALKLPS------------LSGL---------------CSLRKLNLTDCN 739
            +RK     S  L+LPS            + G+                ++  L L +CN
Sbjct: 785 GLRKLQIRRSGVLRLPSNILMMPKLSYILVEGILLLPNKNDNLSSSTSSNVEILRLPNCN 844

Query: 740 LMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
           L +  L + +    ++  L LS+NSF  LP  I     L+ + L DC  L+ +  +PPN+
Sbjct: 845 LSDEFLQTSLAWFANVIHLDLSRNSFTILPEFIKECHFLITLNLNDCTCLREIRGIPPNL 904

Query: 800 RQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQH 859
           +++    C SL +       C+S                      +L + L    +T   
Sbjct: 905 KRLSALQCESLSSS------CRS---------------------MLLNQELHEAGST--- 934

Query: 860 LSVVVPG-SEIPEWFMYQNEGSSITVTRPSNL 890
               +PG S IPEWF +Q  GSSI+    +N+
Sbjct: 935 -DFCLPGTSPIPEWFQHQTRGSSISFWFRNNV 965


>gi|227438127|gb|ACP30553.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1290

 Score =  333 bits (853), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 249/753 (33%), Positives = 381/753 (50%), Gaps = 96/753 (12%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +++  E +  L+   S + RM+GI G  G+GKTTIAR ++  +S  F    FL   R I 
Sbjct: 185 VEAHLEAMNQLLCIESEEARMVGIVGPSGIGKTTIARALFSQLSSRFHYRAFLAYRRTIQ 244

Query: 61  SKGGL-VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
              G+ +  + + LS++L   +  I   + G+  +  RL+ KKVL+ +DDV DV+ L++L
Sbjct: 245 DDYGMKLCWEERFLSEILCQKELKI--CYLGV--VKQRLKLKKVLIFLDDVDDVELLKTL 300

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G  +WFGSGSRII+ S+D  LLK H +D VYK    + D AL++    AF    P    
Sbjct: 301 VGRTKWFGSGSRIIVISQDRQLLKAHDIDLVYKVEFPSEDVALKMLCRSAFGQNSPPNGF 360

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           ++L+  + + AG LPL L VLGS L GR  DEW   + RL      ++   L++S+D L 
Sbjct: 361 MELAVEVAKLAGNLPLGLNVLGSSLRGRGKDEWMKMMPRLRNYLDGKVEKTLRVSYDRLD 420

Query: 240 ELEKKIFLDIAC--FFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWMHD 296
             ++++FL IA    F G    Y+ + L   G     G++ L +K LI + +N T+ MH+
Sbjct: 421 GKDQELFLFIAFARLFNGVQVSYIKDLL---GDSVNTGLKTLADKSLIRITSNETIEMHN 477

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL +L ++I + +S    GKR  L   E++  V T+ TGTE V G+  +    E    + 
Sbjct: 478 LLHKLAREIFRAESINNPGKRRFLVDVEDIRDVFTDKTGTETVLGLYFNALKLEEPFSM- 536

Query: 357 ASAKAFSKMTNLRLLKICN----------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNL 406
              K+F  M NL+ L + +          L LP GL YL  +LRLL W GYP K LPSN 
Sbjct: 537 -DEKSFEGMCNLQFLIVRDYVGYWVPQGKLHLPQGLFYLPRKLRLLRWDGYPSKCLPSNF 595

Query: 407 QMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
           + +  +E+ M  S + +LW+G   L +LK +I+S S  L  +PD + A +LE++ L+ CT
Sbjct: 596 KAEYLVELRMKNSSLEKLWEGTLPLGRLKKLIMSWSTYLKELPDLSNAKSLEEVYLDRCT 655

Query: 467 RLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLP------- 513
            L     S+   +KL  L+++ CT L + P  I +KSLE LN      L++ P       
Sbjct: 656 SLVTFPSSIQNLHKLRELDLEGCTELESFPTLINLKSLEYLNLRECSRLRNFPQIYINSS 715

Query: 514 -------------TTISGLKCLSTLDVSGDLKFREFPE--------------IVEHMEHL 546
                          + GL  L  +      KFR  PE              + E ++ L
Sbjct: 716 QGFSLEVEGCFWNNNLCGLDYLGCIMRCIPCKFR--PEQLIGLTVKSNMLERLWEGVQCL 773

Query: 547 SELHLEGTA----IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS-------------- 588
             L +   +    +  +P  + +   L+ L L NC+SL  +P T+               
Sbjct: 774 GSLEMMDVSSCENLTEIP-DLSMAPNLMYLRLNNCKSLVTVPSTIGSLCKLVGLEMKECT 832

Query: 589 ---------NLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTK 639
                    NL  LR+L LSGCS+L+ FP+I RS   ++ L+L+ T+I+EVP  IE   +
Sbjct: 833 MLEVLPTDVNLSSLRTLYLSGCSRLRSFPQISRS---IASLYLNDTAIEEVPCCIENFWR 889

Query: 640 LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC 672
           L  L++S CK L  +  +   L+SL  ++ S C
Sbjct: 890 LSELSMSGCKRLKNISPNFFRLRSLHLVDFSDC 922



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 116/475 (24%), Positives = 204/475 (42%), Gaps = 120/475 (25%)

Query: 503  SLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPL 561
            SLEKL   +LP     L  L  L +S     +E P++  + + L E++L+  T++   P 
Sbjct: 609  SLEKLWEGTLP-----LGRLKKLIMSWSTYLKELPDL-SNAKSLEEVYLDRCTSLVTFPS 662

Query: 562  SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI-VRSMKDLS-- 618
            SI+ L  L  L+L+ C  LE  P T+ NLK L  L L  CS+L+ FP+I + S +  S  
Sbjct: 663  SIQNLHKLRELDLEGCTELESFP-TLINLKSLEYLNLRECSRLRNFPQIYINSSQGFSLE 721

Query: 619  ---------------------------------ELFLDGTSIKEVPSSIELLTKLELLNL 645
                                              L +    ++ +   ++ L  LE++++
Sbjct: 722  VEGCFWNNNLCGLDYLGCIMRCIPCKFRPEQLIGLTVKSNMLERLWEGVQCLGSLEMMDV 781

Query: 646  SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWY 705
            S C+NL  +P   +A  +L  L L+ C  L  VP T+G +  L  L+             
Sbjct: 782  SSCENLTEIPDLSMA-PNLMYLRLNNCKSLVTVPSTIGSLCKLVGLE------------- 827

Query: 706  SYIPINLMRKSVALK-LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNS 764
                   M++   L+ LP+   L SLR L L+ C+ +  + P    ++ SL   YL+  +
Sbjct: 828  -------MKECTMLEVLPTDVNLSSLRTLYLSGCSRLR-SFPQISRSIASL---YLNDTA 876

Query: 765  FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR------VNGCASLVTLLDALK 818
               +P  I +  +L  + +  CKRL+++    PN  ++R       + C  ++T+L    
Sbjct: 877  IEEVPCCIENFWRLSELSMSGCKRLKNIS---PNFFRLRSLHLVDFSDCGEVITVL---- 929

Query: 819  LCKSDSTMIACL---DSLKLLG---------------------------NKSLAFSMLRE 848
               SD+++ A +   D   L+                            N +  F + R+
Sbjct: 930  ---SDASIKAKMSIEDHFSLIPLFENTEERYKDGADIDWAGVSRNFEFLNFNNCFKLDRD 986

Query: 849  YLEAVSNTRQHLS-VVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
              E +   R ++   V+PG E+P +F ++  G+S+ VT P +  + +  +G+  C
Sbjct: 987  ARELI--IRSYMKPTVLPGGEVPTYFTHRASGNSLAVTLPQSSLS-QDFLGFKAC 1038


>gi|297802316|ref|XP_002869042.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314878|gb|EFH45301.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1178

 Score =  333 bits (853), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 240/714 (33%), Positives = 365/714 (51%), Gaps = 62/714 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +++R ++L   +D       +IG+ GM G+GKTT+  ++Y+     F +  FL +V ++S
Sbjct: 213 INTRLQQLEEKLDFECKSTLIIGVVGMPGIGKTTLTSMLYENWQGGFLSRAFLHDVSQMS 272

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            +     ++  L+++LLK  D            L + L   K L+V+D+V D KQ++ L 
Sbjct: 273 KRYTKRQMRNILMTELLKEVDLKQKVADMSPKSLKAHLLSMKSLIVLDNVSDKKQIKDLL 332

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE-- 178
              +W   GSRII T+ D  +++   VD+ Y+   L   ++   F+  AF    P  E  
Sbjct: 333 EEDDWIKIGSRIIFTTSDISVIEGM-VDDTYEVQRLTGRDSFDYFSHFAFNFKLPTPEGN 391

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
            + LS   + YA G PL L++LG  LSG+    W   L  L   P  ++ D+L+IS+DGL
Sbjct: 392 FINLSRLFVDYAKGNPLVLKILGVELSGKKEKYWTDKLRELAESPIKKLQDVLRISYDGL 451

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIG---IRVLIEKCLITVHNNTLWMH 295
            +L+K +FLD+ACFF+  D  YV   +E C   P+ G   I+ L  K LI +    + MH
Sbjct: 452 GQLQKDVFLDVACFFRSGDDYYVRCLVESCDTEPIDGVSEIKDLASKFLINISGGRMEMH 511

Query: 296 DLLQELGQQIVQRQSPEELGKRS----RLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
           DLL   G+         ELG +S    RLW    +   L +  G + V GI LD +  + 
Sbjct: 512 DLLYTFGK---------ELGSQSQGLRRLWNHILIVGALKKRAGADSVRGIFLDMFELKK 562

Query: 352 EVYLCASAKAFSKMTNLRLLKI------------CNLQLPNGLEYLSNRLRLLGWRGYPL 399
           E+ L      F++M NLR LK             C +  P G+E+  + +R L W  +PL
Sbjct: 563 ELPL--EKCTFTEMRNLRYLKFYSSRCHQEGEADCKINFPEGVEFSLDEVRYLYWLKFPL 620

Query: 400 KFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEK 459
           + LP +       ++ + YS I E+W+G+K   KLK + LSHS  L  +     A +L++
Sbjct: 621 EKLPKDFNPKNLTDLNLPYSEIEEVWEGLKDTPKLKWVDLSHSSKLCNLTGLLNAKSLQR 680

Query: 460 LILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGL 519
           L LEGCT L E+   +     L+ LNM+ CTSL  LP          +NL S+ T I  L
Sbjct: 681 LNLEGCTSLEELPSEMKSLENLVFLNMRGCTSLRVLP---------HMNLISMKTLI--L 729

Query: 520 KCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRS 579
              S+L+        EF  I +++E    L+L+GTAI  LP ++  L  L++LNLK+C+ 
Sbjct: 730 TNCSSLE--------EFQVISDNIE---TLYLDGTAIVQLPPNMVKLQRLIVLNLKDCKM 778

Query: 580 LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTK 639
           L  +P  +  LK L+ L LSGCS LK FP  + +MK L  L LDGT IKE+P  ++    
Sbjct: 779 LRAVPQCLGRLKALQELVLSGCSTLKTFPVPIENMKCLQILLLDGTEIKEIPKILQ---- 834

Query: 640 LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDI 693
               N S  ++L  L   +  L SL+ L LS    + N+   + Q+  L+ LD+
Sbjct: 835 ---YNSSKVEDLRELRRGVKGLSSLRRLCLSRNGMISNLQIDISQLYHLKWLDL 885



 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 140/484 (28%), Positives = 220/484 (45%), Gaps = 62/484 (12%)

Query: 542  HMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
            + + L  L+LEG T++  LP  ++ L  LV LN++ C SL +LP    NL  +++L L+ 
Sbjct: 674  NAKSLQRLNLEGCTSLEELPSEMKSLENLVFLNMRGCTSLRVLPHM--NLISMKTLILTN 731

Query: 601  CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
            CS L++F  I     ++  L+LDGT+I ++P ++  L +L +LNL DCK L  +P  +  
Sbjct: 732  CSSLEEFQVI---SDNIETLYLDGTAIVQLPPNMVKLQRLIVLNLKDCKMLRAVPQCLGR 788

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK 720
            LK+L+ L LSGC  L+  P  +  ++ L+ L + GT +         IP  L   S    
Sbjct: 789  LKALQELVLSGCSTLKTFPVPIENMKCLQILLLDGTEIKE-------IPKILQYNS---- 837

Query: 721  LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS-LPTSITHLSKLL 779
                S +  LR+L               +  L SL+ L LS+N  +S L   I+ L  L 
Sbjct: 838  ----SKVEDLRELR------------RGVKGLSSLRRLCLSRNGMISNLQIDISQLYHLK 881

Query: 780  NIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCK------SDSTMIAC---- 829
             ++L+ CK L S+  LPPN+  +  +GC  L T+   + L K      S      C    
Sbjct: 882  WLDLKYCKNLTSISLLPPNLEILDAHGCEKLKTVASPMALPKLMEQVRSKFIFTNCNKLE 941

Query: 830  ---LDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTR 886
                +S+ L   +      LR Y E  + +   L    PGSE+P WF +Q  GS + +  
Sbjct: 942  QVAKNSITLYAQRKCQLDALRCYKEG-TVSEALLITCFPGSEVPSWFNHQTFGSKLKLKF 1000

Query: 887  PSNLYNKKKLVGYAICCVFHVLK---NSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFG 943
            P + +    L    +C V    +   N    +C   +      C       G G+ +   
Sbjct: 1001 PPH-WCDNGLSTLVLCAVVKFPRDEINRFSIDCTCEFKNEVETCIRFSCTLGGGWIES-R 1058

Query: 944  QAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESN-----HVNVSFEPWLGQGLEVKMCGL 998
            +  SDH+++ Y S      I   LE +L+  E +       ++ F    G G E+  CGL
Sbjct: 1059 KIDSDHVFIGYTSSS---HITKHLEGSLKSQEHHKYVPTEASIEFTVRHGAG-EIVNCGL 1114

Query: 999  HPVY 1002
              VY
Sbjct: 1115 SLVY 1118



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 112/214 (52%), Gaps = 31/214 (14%)

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
           L+K P+     K+L++L L  + I+EV   ++   KL+ ++LS    L  L + ++  KS
Sbjct: 620 LEKLPKDFNP-KNLTDLNLPYSEIEEVWEGLKDTPKLKWVDLSHSSKLCNL-TGLLNAKS 677

Query: 664 LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPS 723
           L+ LNL GC  LE +P  +  +E+L  L+                    MR   +L++  
Sbjct: 678 LQRLNLEGCTSLEELPSEMKSLENLVFLN--------------------MRGCTSLRVLP 717

Query: 724 LSGLCSLRKLNLTDCN-LMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIE 782
              L S++ L LT+C+ L E  + SD     +++ LYL   + V LP ++  L +L+ + 
Sbjct: 718 HMNLISMKTLILTNCSSLEEFQVISD-----NIETLYLDGTAIVQLPPNMVKLQRLIVLN 772

Query: 783 LEDCKRLQSLPQLPPNIRQVR---VNGCASLVTL 813
           L+DCK L+++PQ    ++ ++   ++GC++L T 
Sbjct: 773 LKDCKMLRAVPQCLGRLKALQELVLSGCSTLKTF 806


>gi|357499355|ref|XP_003619966.1| Resistance protein [Medicago truncatula]
 gi|355494981|gb|AES76184.1| Resistance protein [Medicago truncatula]
          Length = 725

 Score =  332 bits (852), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 214/574 (37%), Positives = 329/574 (57%), Gaps = 50/574 (8%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + SR E+++ L+D  S + V M+G+ G GG+GK+T+A+ +Y+ ++ +FE   FL  VRE 
Sbjct: 197 LKSRVEQVKLLLDMESDEGVHMVGLYGTGGMGKSTLAKAIYNFVADQFEGVCFLHKVREN 256

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+   L  LQ++LL + +KL +  + +  +GI ++  RL R K+LL++DDV  ++QL++L
Sbjct: 257 STHNSLKHLQKELLLKTVKL-NIKLGDASEGIPLIKERLNRMKILLILDDVDKLEQLEAL 315

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG GSR+IIT+RD+HLL  HG++  Y  +GL+  EA +L    AFK  +     
Sbjct: 316 AGGLDWFGHGSRVIITTRDKHLLTCHGIERTYAVNGLHETEAFELLRWMAFKNGEVPSSY 375

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R + YA GLPL LE++GS L G+S++EW+ TL+  E  P  EI  IL++S+D L+
Sbjct: 376 NDVLNRAVAYASGLPLVLEIVGSNLFGKSMEEWQCTLDGYEKIPNKEIQRILKVSYDALE 435

Query: 240 ELEKKIFLDIACFFKGND----RDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMH 295
           E ++ +FLDIAC FKG       D +      C  H V    VL EK LI  +  ++ +H
Sbjct: 436 EEQQSVFLDIACCFKGGSWIEFEDILKYHYGRCIKHHV---GVLAEKSLIYQYGLSVRLH 492

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DL++++G++IV+++SP+E G+RSRLW  +++ HVL E+TGT  +E + L  +    E  +
Sbjct: 493 DLIEDMGKEIVRQESPKEPGERSRLWCHDDIIHVLEENTGTSKIEMVYL--HCPSTEPVI 550

Query: 356 CASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
             + KAF KM  L+ L I N     G +YLS+ LR+L W+GYP K L S           
Sbjct: 551 DWNGKAFKKMKKLKTLVIENGHFSKGPKYLSSCLRVLKWKGYPSKSLSS----------- 599

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
            C+          K  + +KV+IL + E L  +P+ +  PNLEKL+   C  L  IH S+
Sbjct: 600 -CFLN--------KKFENMKVLILDYCEYLTCIPNVSDLPNLEKLLFINCHNLITIHNSI 650

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
              NKL  L  K C+ L + P                P  ++ LK L   +     + + 
Sbjct: 651 GYLNKLETLIAKYCSKLESFP----------------PLQLASLKILELYEC---FRLKS 691

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGL 569
           FPE++  M ++ E+ L  T+IR L  S + LS L
Sbjct: 692 FPELLCKMINIKEIRLSETSIRELSFSFQNLSEL 725



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 2/79 (2%)

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
           SI  L+ L  L  K C  LE  P     L  L+ L+L  C +LK FPE++  M ++ E+ 
Sbjct: 649 SIGYLNKLETLIAKYCSKLESFPPL--QLASLKILELYECFRLKSFPELLCKMINIKEIR 706

Query: 622 LDGTSIKEVPSSIELLTKL 640
           L  TSI+E+  S + L++L
Sbjct: 707 LSETSIRELSFSFQNLSEL 725


>gi|356514963|ref|XP_003526171.1| PREDICTED: TMV resistance protein N-like, partial [Glycine max]
          Length = 1055

 Score =  332 bits (852), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 238/665 (35%), Positives = 365/665 (54%), Gaps = 71/665 (10%)

Query: 1   MDSRCEKL-RFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           M+S  E+L + L     SDVR++GI GMGG+GKTT+AR +Y+ I+ +++   F+D+V  I
Sbjct: 211 MESSVEELEKCLALESVSDVRVVGISGMGGIGKTTLARALYEKIADQYDFHCFVDDVNNI 270

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
                 + +Q+QLLSQ L   +  I NV  G  ++ + L+ K+ L+V+D+V  V+QL   
Sbjct: 271 YRHSSSLGVQKQLLSQCLNDENLEICNVSKGTYLVSTMLRNKRGLIVLDNVGQVEQLHMF 330

Query: 120 AGNREWF-----GSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
             +RE       G GSRIIITSRDEH+L+THGV+ VY+   L++D A++LF + AFK   
Sbjct: 331 TQSRETLLRECLGGGSRIIITSRDEHILRTHGVNHVYQVQPLSWDNAVKLFCINAFKCTY 390

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
            + +   L+  ++ +A G PLA+EV+G  L GR+V +W STL+RL       I+D+L+IS
Sbjct: 391 IMSDYEMLTHGVLSHAQGHPLAIEVIGKSLFGRNVSQWTSTLDRLRDNKSRNIMDVLRIS 450

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
           +D L+E +++IFLDIACFF  +   +V   L   GF P IG+ +L+EK LIT+ +  + M
Sbjct: 451 YDDLEEKDREIFLDIACFFNDDHEQHVKEILNFRGFDPEIGLPILVEKSLITISDGLIHM 510

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           HDLL++LG+ IV+ +SP+E  K SRLW  E++  V++++                     
Sbjct: 511 HDLLRDLGKCIVREKSPKEPRKWSRLWDFEDIYKVMSDNM-------------------- 550

Query: 355 LCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
                     + NLRLL + N +  N +E                  +P+  +      +
Sbjct: 551 ---------PLPNLRLLDVSNCK--NLIE------------------VPNFGEAPNLASL 581

Query: 415 YMCYS-RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
            +C   R+ +L   I  L KL ++ L    +L  +P F    NLE+L LEGC +L +IHP
Sbjct: 582 NLCGCIRLRQLHSSIGLLRKLTILNLKECRSLTDLPHFVQGLNLEELNLEGCVQLRQIHP 641

Query: 474 SLLLHNKLIILNMKDCTSLITLPGKIL-MKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
           S+    KL +LN+KDC SL+++P  IL + SLE L+L       SG   L  + +S +L+
Sbjct: 642 SIGHLRKLTVLNLKDCISLVSIPNTILGLNSLECLSL-------SGCSKLYNIHLSEELR 694

Query: 533 FREFPEIVEHMEHLS-ELHLEGTAIRGLPL-SIELLSGLVLLNLKNCRSLEILPVTVSNL 590
              + + +   E  S    +     + LP  S+     L   +  + R L  LP ++  L
Sbjct: 695 DARYLKKLRMGEAPSCSQSIFSFLKKWLPWPSMAFDKSLEDAHKDSVRCL--LP-SLPIL 751

Query: 591 KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKN 650
            C+R L LS C+ L K P+   ++  L +L L G + + +PS  E L+KL  LNL  CK 
Sbjct: 752 SCMRELDLSFCN-LLKIPDAFGNLHCLEKLCLRGNNFETLPSLKE-LSKLLHLNLQHCKR 809

Query: 651 LVRLP 655
           L  LP
Sbjct: 810 LKYLP 814



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 161/531 (30%), Positives = 245/531 (46%), Gaps = 89/531 (16%)

Query: 522  LSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSL 580
            L  LDVS      E P   E   +L+ L+L G   +R L  SI LL  L +LNLK CRSL
Sbjct: 555  LRLLDVSNCKNLIEVPNFGE-APNLASLNLCGCIRLRQLHSSIGLLRKLTILNLKECRSL 613

Query: 581  EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
              LP  V  L  L  L L GC +L+                       ++  SI  L KL
Sbjct: 614  TDLPHFVQGLN-LEELNLEGCVQLR-----------------------QIHPSIGHLRKL 649

Query: 641  ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV--PETLGQIESLEELDISGTAV 698
             +LNL DC +LV +P++I+ L SL+ L+LSGC KL N+   E L     L++L + G A 
Sbjct: 650  TVLNLKDCISLVSIPNTILGLNSLECLSLSGCSKLYNIHLSEELRDARYLKKLRM-GEAP 708

Query: 699  PHSTSWYSYIPINLMRKSVALK--------------LPSLSGLCSLRKLNLTDCNLMEGA 744
              S S +S++   L   S+A                LPSL  L  +R+L+L+ CNL++  
Sbjct: 709  SCSQSIFSFLKKWLPWPSMAFDKSLEDAHKDSVRCLLPSLPILSCMRELDLSFCNLLK-- 766

Query: 745  LPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP-------P 797
            +P   GNL  L++L L  N+F +LP S+  LSKLL++ L+ CKRL+ LP+LP       P
Sbjct: 767  IPDAFGNLHCLEKLCLRGNNFETLP-SLKELSKLLHLNLQHCKRLKYLPELPSRTDVPSP 825

Query: 798  NIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTR 857
            +  ++R     +   +L           +  C + ++     S+  S + + ++A S  +
Sbjct: 826  SSNKLRWTSVENEEIVLGL--------NIFNCPELVERDCCTSMCLSWMMQMVQAFSKPK 877

Query: 858  Q-----HLSVVVPGSEIPEWFMYQN--EGSSITVTRPSNLY--NKKKLVGYAICCVF--H 906
                   +S ++PGS+IP WF  Q+   G+ I +   S+ +  +    +G A   +F  H
Sbjct: 878  SPWWIPFISSIIPGSKIPRWFDEQHLGMGNVIKIEHASDHFMQHHNNWIGIACSVIFVPH 937

Query: 907  VLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLP 966
              +  R    F      +   +I      + FR       SDH+ L Y +R++       
Sbjct: 938  KERTMRHPESFTDESDERPCFYI-----PLLFRKDLVTDESDHMLLFYYTRESF------ 986

Query: 967  LESNLEPFESNH----VNVSFEPWLGQGLEVKMCGLHPVYMDEVEELDQTT 1013
              + L  FE +     V  S +P     +EVK  G   VY  ++E  + TT
Sbjct: 987  --TFLTSFEHHDELKVVCASSDPDQYFDVEVKKYGYRRVYRHDLELSNLTT 1035



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 89/180 (49%), Gaps = 25/180 (13%)

Query: 623 DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
           D   I +V S    L  L LL++S+CKNL+ +P+   A  +L +LNL GC +L  +  ++
Sbjct: 538 DFEDIYKVMSDNMPLPNLRLLDVSNCKNLIEVPNFGEA-PNLASLNLCGCIRLRQLHSSI 596

Query: 683 GQIESLEELDI----SGTAVPHSTSWYSYIPINLMRKSVALKL--PSLSGLCSLRKLNLT 736
           G +  L  L++    S T +PH     +   +NL    V L+   PS+  L  L  LNL 
Sbjct: 597 GLLRKLTILNLKECRSLTDLPHFVQGLNLEELNL-EGCVQLRQIHPSIGHLRKLTVLNLK 655

Query: 737 DCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNI----ELEDCKRLQSL 792
           DC +   ++P+ I  L SL+ L            S++  SKL NI    EL D + L+ L
Sbjct: 656 DC-ISLVSIPNTILGLNSLECL------------SLSGCSKLYNIHLSEELRDARYLKKL 702


>gi|356569977|ref|XP_003553169.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 833

 Score =  332 bits (852), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 210/577 (36%), Positives = 330/577 (57%), Gaps = 59/577 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++  C+ +  L+  G ++VR +GI GMGG+GKT +A  +YD +SHEFE S FL NV E S
Sbjct: 193 IEEHCKHIESLLKIGPTEVRTLGIWGMGGIGKTALATTLYDKLSHEFEGSSFLSNVNEKS 252

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            K                  +N   + F   DM  S L+ KK L+V+DDV   + L+ L 
Sbjct: 253 DK-----------------LEN---HCFGNSDM--STLRGKKALIVLDDVATSEHLEKLK 290

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            + ++   GSR+I+T+R+  +L  +  DE+Y+   L+   ++QLF +  F   QP +   
Sbjct: 291 VDYDFLEPGSRVIVTTRNREILGPN--DEIYQVKELSSHHSVQLFCLTVFGEKQPKEGYE 348

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            LS R++ Y  G+PLAL+V+G+ L  +S + W S L +L+     EI  +L++S+DGL  
Sbjct: 349 DLSERVLSYCKGIPLALKVMGASLRRKSKEAWESELRKLQKISSMEIHTVLKLSYDGLDH 408

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQ 299
            +K IFLDIACFFKG +RD+VT  L+   F    GI VL++K LIT+   N + MHDL+Q
Sbjct: 409 SQKDIFLDIACFFKGRERDWVTRVLDAFDFFAASGIEVLLDKALITISEGNHIEMHDLIQ 468

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G +IV+++  ++ G++SRLW++EEV ++L  + GT++VEGI+L        + L  S 
Sbjct: 469 EMGWEIVRQECIKDPGRQSRLWRQEEVQNILKYNRGTDVVEGIILSLRKLTEALRL--SF 526

Query: 360 KAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
              +KMTNLR L+  +        + +P G E L ++LR L W G+ L+ LP N   ++ 
Sbjct: 527 DFLAKMTNLRFLQFYDGWDDYGSKVPVPTGFESLPDKLRYLHWEGFCLESLPLNFCAEQL 586

Query: 412 IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
           +E+YM +S++ +LW G+++L  LK++ L  S++LI +PD + A  LE + L  C  L ++
Sbjct: 587 VELYMPFSKLKKLWDGVQNLVNLKIIGLQGSKDLIEVPDLSKAEKLEIVNLSFCVSLLQL 646

Query: 472 HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKS-----LPTTISGLKCLSTLD 526
           H   +    L  LN K+C+SL      +  + + +LNL       LP +I   K L+ L 
Sbjct: 647 H---VYSKSLQGLNAKNCSSLKEFS--VTSEEITELNLADTAICELPPSIWQKKKLAFLV 701

Query: 527 VSG--DLKF------------REFPEIVEHMEHLSEL 549
           ++G  +LKF            R+F  I E  +H S+L
Sbjct: 702 LNGCKNLKFFGNEIVHLLSSKRQFDRIREVCDHFSDL 738



 Score = 44.3 bits (103), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 85/181 (46%), Gaps = 18/181 (9%)

Query: 490 TSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSEL 549
           T   +LP K+     E   L+SLP       C   L V   + F +  ++ + +++L  L
Sbjct: 555 TGFESLPDKLRYLHWEGFCLESLPLNF----CAEQL-VELYMPFSKLKKLWDGVQNLVNL 609

Query: 550 HLEGTAIRGLPLSIEL-----LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKL 604
            + G  ++G    IE+        L ++NL  C SL  L V     K L+ L    CS L
Sbjct: 610 KIIG--LQGSKDLIEVPDLSKAEKLEIVNLSFCVSLLQLHVYS---KSLQGLNAKNCSSL 664

Query: 605 KKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSL 664
           K+F     + ++++EL L  T+I E+P SI    KL  L L+ CKNL    + I+ L S 
Sbjct: 665 KEFS---VTSEEITELNLADTAICELPPSIWQKKKLAFLVLNGCKNLKFFGNEIVHLLSS 721

Query: 665 K 665
           K
Sbjct: 722 K 722



 Score = 40.0 bits (92), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 19/119 (15%)

Query: 592 CLRSLKLSGC-----------SKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTK 639
           CL SL L+ C           SKLKK  + V+++ +L  + L G+  + EVP  +    K
Sbjct: 573 CLESLPLNFCAEQLVELYMPFSKLKKLWDGVQNLVNLKIIGLQGSKDLIEVPD-LSKAEK 631

Query: 640 LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
           LE++NLS C +L++L    +  KSL+ LN   C  L+    T    E + EL+++ TA+
Sbjct: 632 LEIVNLSFCVSLLQLH---VYSKSLQGLNAKNCSSLKEFSVT---SEEITELNLADTAI 684


>gi|359477825|ref|XP_002282820.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1292

 Score =  332 bits (851), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 200/474 (42%), Positives = 301/474 (63%), Gaps = 19/474 (4%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EKL+ LM++  + V ++GICG+GG+GKTTIA+ +Y+ IS++++ S FL N+RE  SKG +
Sbjct: 201 EKLKSLMNTNLNKVSVVGICGIGGVGKTTIAKAIYNEISYQYDGSSFLKNIRE-RSKGDI 259

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
           + LQ++LL  +LK  +  + N+ +GI M+   L   +VL++ DDV ++KQL+ LA  ++W
Sbjct: 260 LQLQQELLHGILKGKNFKVNNIDEGISMIKRCLSSNRVLVIFDDVDELKQLEYLAEEKDW 319

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSAR 185
           F + S IIITSRD+ +L  +GVD  Y+   LN  EA+++F++ AF+   P +    LS  
Sbjct: 320 FEAKSTIIITSRDKQVLAQYGVDISYEVSKLNKKEAIEVFSLWAFQHNLPKEVYKNLSYN 379

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           II YA GLPLAL+VLG  L G++  EW S L +L+  P  EI ++L+ISFDGL +++K I
Sbjct: 380 IIDYANGLPLALKVLGGSLFGKTRSEWESALCKLKTIPHMEIHNVLRISFDGLDDVDKGI 439

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQI 305
           FLD+ACFFKGND+DYV+  L   G +   GI  L ++CL+T+  N L MHDL+Q++G +I
Sbjct: 440 FLDVACFFKGNDKDYVSRIL---GPYAEYGITTLDDRCLLTISKNMLDMHDLIQQMGWEI 496

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTESTGT---------ELVEGIVLDNYHHENEVYLC 356
           ++++  E LG+RSRLW + +  HVLT +            +  +G  L   + +  V+L 
Sbjct: 497 IRQECLENLGRRSRLW-DSDAYHVLTRNMSDPTPACPPSLKKTDGACLFFQNSDGGVFLE 555

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            S       +  R     +L L    E+ S+ L  L W GYPL++LP N      +E+ +
Sbjct: 556 KSDMPPPFSSRGR-----DLPLFCDFEFSSHELTYLYWDGYPLEYLPMNFHAKNLVELLL 610

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYE 470
             + I +LW+G K   KLKV+ LS+S +LI++PDF+  PNLE L LEGCT  +E
Sbjct: 611 RNNNIKQLWRGNKLHKKLKVIDLSYSVHLIKIPDFSSVPNLEILTLEGCTTDWE 664



 Score =  186 bits (471), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 123/331 (37%), Positives = 174/331 (52%), Gaps = 38/331 (11%)

Query: 572  LNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP 631
            L L++C++L  LP ++   K L +L  SGCS+L+ FPEIV+ M+ L +L+LDGT+I+E+P
Sbjct: 899  LCLRDCKNLTSLPSSIFGFKSLAALSCSGCSQLESFPEIVQDMERLRKLYLDGTAIREIP 958

Query: 632  SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
            SSI+ L  L+ L LS CKNLV LP SI  L S KTL +S C     +P+ LG+++SLE L
Sbjct: 959  SSIQRLRGLQSLFLSQCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEHL 1018

Query: 692  DISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGN 751
             +             Y+       S+  +LPSLSGLCSLR L L  CNL E   PS+I  
Sbjct: 1019 FV------------GYL------DSMNFQLPSLSGLCSLRILMLQACNLRE--FPSEIYY 1058

Query: 752  LCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLV 811
            L SL  LYL  N F  +P  I+ L  L + +L  CK LQ +P+LP  +  +  + C SL 
Sbjct: 1059 LSSLVMLYLGGNHFSRIPDGISQLYNLKHFDLSHCKMLQHIPELPSGLTYLDAHHCTSLE 1118

Query: 812  TLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPE 871
             L                  S +     S  F  L+  ++ V       + +   + IPE
Sbjct: 1119 NL------------------SSQSSLLWSSLFKCLKSQIQGVEVGAIVQTFIPESNGIPE 1160

Query: 872  WFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
            W  +Q  G  IT+  P + Y     +G+ +C
Sbjct: 1161 WISHQKSGFQITMELPWSWYENDDFLGFVLC 1191



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 7/190 (3%)

Query: 508  NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
            NL SLP++I G K L+ L  SG  +   FPEIV+ ME L +L+L+GTAIR +P SI+ L 
Sbjct: 906  NLTSLPSSIFGFKSLAALSCSGCSQLESFPEIVQDMERLRKLYLDGTAIREIPSSIQRLR 965

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF---LDG 624
            GL  L L  C++L  LP ++ NL   ++L +S C    K P+ +  ++ L  LF   LD 
Sbjct: 966  GLQSLFLSQCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEHLFVGYLDS 1025

Query: 625  TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQ 684
             +  ++P S+  L  L +L L  C NL   PS I  L SL  L L G      +P+ + Q
Sbjct: 1026 MNF-QLP-SLSGLCSLRILMLQAC-NLREFPSEIYYLSSLVMLYLGGN-HFSRIPDGISQ 1081

Query: 685  IESLEELDIS 694
            + +L+  D+S
Sbjct: 1082 LYNLKHFDLS 1091



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 20/197 (10%)

Query: 399  LKFLPSNLQ-MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPN 456
            L+  P  +Q M++  ++Y+  + I E+   I+ L  L+ + LS  +NL+ +P+      +
Sbjct: 931  LESFPEIVQDMERLRKLYLDGTAIREIPSSIQRLRGLQSLFLSQCKNLVNLPESICNLTS 990

Query: 457  LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
             + L++  C             NKL   N+    SL  L     +  L+ +N + LP ++
Sbjct: 991  FKTLVVSRCPNF----------NKLPD-NLGRLQSLEHL----FVGYLDSMNFQ-LP-SL 1033

Query: 517  SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
            SGL  L  L +      REFP  + ++  L  L+L G     +P  I  L  L   +L +
Sbjct: 1034 SGLCSLRILMLQA-CNLREFPSEIYYLSSLVMLYLGGNHFSRIPDGISQLYNLKHFDLSH 1092

Query: 577  CRSLEILPVTVSNLKCL 593
            C+ L+ +P   S L  L
Sbjct: 1093 CKMLQHIPELPSGLTYL 1109


>gi|227438113|gb|ACP30546.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 799

 Score =  332 bits (851), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 217/592 (36%), Positives = 336/592 (56%), Gaps = 45/592 (7%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLIS---HEFEASGFLDNVREISSKGGL--VSLQR 70
           +++V++IGI G  G+GKTTIAR +Y+ +S    EF+ + F++NV+ +  +  L   SL+ 
Sbjct: 203 TNEVKIIGIWGPAGIGKTTIARALYNQLSSSGDEFQLNLFMENVKGVQMRKELHGYSLKL 262

Query: 71  QLLSQLLKLADNSIWNVFDGIDMLG---SRLQRKKVLLVIDDVVDVKQLQSLAGNREWFG 127
            L  + L    + I+N    I  LG    RL+ +K L+V+DDV  ++QL +L    EWFG
Sbjct: 263 HLQERFL----SEIFNQRTKISHLGVAQERLKNQKALVVLDDVDGLEQLNALIDTTEWFG 318

Query: 128 SGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARII 187
            G+RII+T+ D  LLK HG+++VY+    +  EA ++    AF      +    L+  + 
Sbjct: 319 YGTRIIVTTEDRQLLKAHGINQVYEVGYPSQGEAFKILCRYAFGDNSAPKGFYDLATEVT 378

Query: 188 RYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFL 247
           + AG LPL L VLG+ L G S +EW + + RL      +I  +L + +DGL E +K +FL
Sbjct: 379 KLAGDLPLGLSVLGASLRGLSKEEWINAIPRLRTSLNGKIEKLLGVCYDGLDEKDKTLFL 438

Query: 248 DIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQIV 306
            +AC F G   D V   L         G++VL+++ LI ++ +  + MH LLQ++G++I+
Sbjct: 439 HVACLFNGEKVDRVKQLLAKSALDADFGLKVLVDRSLIHIYADGYIVMHFLLQQMGKEII 498

Query: 307 QRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMT 366
           + Q   + G+R  L   +E+  VL + TGT+ V GI LD    ++EVY+  S KAF KMT
Sbjct: 499 RGQCINDPGRRQFLVDAQEISDVLVDETGTKNVLGISLDMSELDDEVYI--SEKAFKKMT 556

Query: 367 NLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
           NL+ L++ N        LQLP+GL+YL  +LRLL    YP+K +PS  + +  +E+ +  
Sbjct: 557 NLQFLRLYNHFPDEAVKLQLPHGLDYLPRKLRLLHRDSYPIKCMPSKFRPEFLVELTLRD 616

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           S++ +LW+G++ L  L  M LS S+N+  +P+ +GA NLEKL L  C  L  +  S L +
Sbjct: 617 SKLVKLWEGVQPLTSLTYMDLSSSKNIKDIPNLSGAMNLEKLYLRFCENLVTVSSSSLQN 676

Query: 479 -NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
            NKL +L+M  CT                  LK+LPT I+ L+ LS L++ G  K + FP
Sbjct: 677 LNKLKVLDMSCCT-----------------KLKALPTNIN-LESLSVLNLRGCSKLKRFP 718

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSN 589
            I   ++ +S   L  TAI  +P  I L S LV L +  C++L+ LP   +N
Sbjct: 719 CISTQVQFMS---LGETAIEKVPSLIRLCSRLVSLEMAGCKNLKTLPPVPAN 767



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 12/176 (6%)

Query: 487 KDCTSLITLPGKILMKSLEKLNLKS-----LPTTISGLKCLSTLDVSGDLKFREFPEIVE 541
           +D   +  +P K   + L +L L+      L   +  L  L+ +D+S     ++ P +  
Sbjct: 592 RDSYPIKCMPSKFRPEFLVELTLRDSKLVKLWEGVQPLTSLTYMDLSSSKNIKDIPNLSG 651

Query: 542 HMEHLSELHLE--GTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
            M +L +L+L      +     S++ L+ L +L++  C  L+ LP  + NL+ L  L L 
Sbjct: 652 AM-NLEKLYLRFCENLVTVSSSSLQNLNKLKVLDMSCCTKLKALPTNI-NLESLSVLNLR 709

Query: 600 GCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           GCSKLK+FP I   ++ +S   L  T+I++VPS I L ++L  L ++ CKNL  LP
Sbjct: 710 GCSKLKRFPCISTQVQFMS---LGETAIEKVPSLIRLCSRLVSLEMAGCKNLKTLP 762



 Score = 43.9 bits (102), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 50/199 (25%)

Query: 602 SKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           SKL K  E V+ +  L+ + L  + +IK++P+ +     LE L L  C+NLV + SS + 
Sbjct: 617 SKLVKLWEGVQPLTSLTYMDLSSSKNIKDIPN-LSGAMNLEKLYLRFCENLVTVSSSSLQ 675

Query: 661 -LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVAL 719
            L  LK L++S C KL+ +P  +    +LE L +                +NL   S   
Sbjct: 676 NLNKLKVLDMSCCTKLKALPTNI----NLESLSV----------------LNLRGCSKLK 715

Query: 720 KLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLL 779
           + P +S          T    M            SL E  + K     +P+ I   S+L+
Sbjct: 716 RFPCIS----------TQVQFM------------SLGETAIEK-----VPSLIRLCSRLV 748

Query: 780 NIELEDCKRLQSLPQLPPN 798
           ++E+  CK L++LP +P N
Sbjct: 749 SLEMAGCKNLKTLPPVPAN 767


>gi|357499337|ref|XP_003619957.1| Resistance-gene protein [Medicago truncatula]
 gi|355494972|gb|AES76175.1| Resistance-gene protein [Medicago truncatula]
          Length = 1118

 Score =  332 bits (850), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 238/723 (32%), Positives = 381/723 (52%), Gaps = 64/723 (8%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + SR ++++ L+D G  D V M+GI G+GGLGK+ +AR +Y+ ++ +FE   FL +VRE 
Sbjct: 200 LHSRVQEVKSLLDEGPDDGVHMVGIYGIGGLGKSALARAIYNFVADQFEGLCFLHDVREN 259

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S++  L  LQ +LL +   L    + +V +GI ++  RL R K+LL++DDV D++QL +L
Sbjct: 260 SAQNNLKHLQEKLLLKTTGLKI-KLDHVCEGIPIIKERLCRNKILLILDDVDDMEQLHAL 318

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG GSR+IIT+RD+HLL +H ++  Y   GL   EAL+L    AFK  +     
Sbjct: 319 AGGPDWFGHGSRVIITTRDKHLLTSHDIERTYAVEGLYGTEALELLRWMAFKNNKVPSSY 378

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R + YA GLPL LE++GS L G+S+ EW+ TL+  E  P  +I +IL++S+D L+
Sbjct: 379 EDILNRAVSYASGLPLVLEIVGSNLFGKSIKEWKGTLDGYEKIPNKKIHEILKVSYDALE 438

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVI-GIRVLIEKCLITVHN-------NT 291
           E ++ +FLDIAC FKG   +   + L     H +   + VL EK LI +         + 
Sbjct: 439 EEQQSVFLDIACCFKGCGWEEFEDILHVHYGHCITHHLGVLAEKSLIKISTCYHSGSIDV 498

Query: 292 LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
           + +HDL++++G+++V+++SP++  KRSRLW+ E++ HV+ E+ GT  +E I ++   H  
Sbjct: 499 VRVHDLIKDMGKEVVRQESPKDPEKRSRLWRHEDIVHVIKENIGTSKIEMINMN--FHSM 556

Query: 352 EVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           E  +    KAF KMT LR L I N     GL+YL + L +L W+G               
Sbjct: 557 ESVIDQKGKAFKKMTKLRTLIIENGHFSEGLKYLPSSLIVLKWKG--------------- 601

Query: 412 IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
                C S         K+   +KV+ L  +E L  +PD +G  NLEK   + C  L  I
Sbjct: 602 -----CLSESLSSSILSKNFQNMKVLTLDDNEYLTHIPDLSGLQNLEKFSFKYCENLITI 656

Query: 472 HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDL 531
             S+   NKL  L+   C+ L   P  + + SL++LN          L C  +L      
Sbjct: 657 DNSIGHLNKLERLSAFGCSKLERFP-PLGLASLKELN----------LCCCDSL------ 699

Query: 532 KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL--EILPVTVSN 589
             + FP+++  M ++  + L  T I  L  S + LS L  L+++ C  L  ++  +  SN
Sbjct: 700 --KSFPKLLCEMTNIDCIWLNYTPIGELLSSFQNLSELDELSVRECGMLNDKMYSIMFSN 757

Query: 590 LKCLRSLKLSGCSKLKKFPEIV-RSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDC 648
           +     L L  C+   ++ +IV +   ++ EL L   + K +P  +     L+ L+LS C
Sbjct: 758 VT---ELSLKDCNLSDEYLQIVLKWCVNVEELELSNNNFKILPECLSECHHLKHLDLSYC 814

Query: 649 KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHST----SW 704
            +L  +        +LK L+  GC  L +    +   + L E   +    P+ T     W
Sbjct: 815 TSLEEIRG---IPPNLKELSAEGCKSLSSSSRRMLMSQQLHEAQWTYFVFPNGTEGIPDW 871

Query: 705 YSY 707
           + +
Sbjct: 872 FEH 874



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 159/361 (44%), Gaps = 74/361 (20%)

Query: 565 LLSGLVLLNLKNCRSLEILPVTV-SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-FL 622
           L S L++L  K C S  +    +  N + ++ L L     L   P++   +++L +  F 
Sbjct: 590 LPSSLIVLKWKGCLSESLSSSILSKNFQNMKVLTLDDNEYLTHIPDL-SGLQNLEKFSFK 648

Query: 623 DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
              ++  + +SI  L KLE L+   C  L R P   + L SLK LNL  C  L++ P+ L
Sbjct: 649 YCENLITIDNSIGHLNKLERLSAFGCSKLERFPP--LGLASLKELNLCCCDSLKSFPKLL 706

Query: 683 GQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVA--LKLPSLS--------------G 726
            ++ +++ +            W +Y PI  +  S     +L  LS               
Sbjct: 707 CEMTNIDCI------------WLNYTPIGELLSSFQNLSELDELSVRECGMLNDKMYSIM 754

Query: 727 LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDC 786
             ++ +L+L DCNL +  L   +    +++EL LS N+F  LP  ++    L +++L  C
Sbjct: 755 FSNVTELSLKDCNLSDEYLQIVLKWCVNVEELELSNNNFKILPECLSECHHLKHLDLSYC 814

Query: 787 KRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSML 846
             L+ +  +PPN++++   GC                          K L + S    M 
Sbjct: 815 TSLEEIRGIPPNLKELSAEGC--------------------------KSLSSSSRRMLMS 848

Query: 847 REYLEAVSNTRQHLSVVVP-GSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCV 904
           ++  EA     Q    V P G+E IP+WF +Q++G +I+       + +K++   +I C+
Sbjct: 849 QQLHEA-----QWTYFVFPNGTEGIPDWFEHQSKGPTIS------FWFRKEIP--SITCI 895

Query: 905 F 905
           F
Sbjct: 896 F 896


>gi|223403523|gb|ACM89261.1| disease resistance protein (TIR-NBS-LRR class) [Arabidopsis
           thaliana]
          Length = 1163

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 238/717 (33%), Positives = 362/717 (50%), Gaps = 63/717 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++ R +++   +D  S + + +GI GM G+GKTT+A  +Y    H+FE S F  +  +++
Sbjct: 258 IEPRLKEMEEKLDFDSLETKTVGIVGMPGIGKTTLAETLYRKWEHKFERSMFFPDASKMA 317

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           ++ G+  LQ++LL +LLK  + +I    +  +     L  KKV LVID+V   +Q+++L 
Sbjct: 318 NEHGMCWLQKRLLEELLKDTNLNIGYTTNEHEFCKDVLLLKKVFLVIDNVSSEEQIETLF 377

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G   W  +GS+I+ITS DE +LK   V + Y    LN  ++L  F   AF         V
Sbjct: 378 GKWNWIKNGSKIVITSSDESMLKGF-VKDTYVVPSLNSRDSLLWFTNHAFGLDDAQGNLV 436

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS   + YA G PLAL   G  L G+   +W   ++ L +     I D+L+  +D L E
Sbjct: 437 KLSKHFLNYAKGNPLALGAFGVELCGKDKADWEKRIKTLTLISNKMIQDVLRRRYDELTE 496

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIG---IRVLIEKCLITVHNNTLWMHDL 297
            +K IFLD+ACFFK  +  YV + +  C          I  L  K L+ +    + MHD+
Sbjct: 497 RQKDIFLDVACFFKSENESYVRHVVNSCDSESTKSWDEITDLKGKFLVNISGGRVEMHDI 556

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           L    +++  +   E+     RLW  +++   L      E V GI LD      E+    
Sbjct: 557 LCTFAKELASQALTEDTRVHLRLWNYQDIMWFLNNELEMENVRGIFLDMSKVPEEMTF-- 614

Query: 358 SAKAFSKMTNLRLLKI----CNLQLPNGLEYLS--------NRLRLLGWRGYPLKFLPSN 405
               FS M NLR LKI    C+ +     ++ +        +++R L W  YP + LPS+
Sbjct: 615 DGNIFSNMCNLRYLKIYSSVCHKEGEGIFKFDTVREIQLPLDKVRYLHWMKYPWEKLPSD 674

Query: 406 LQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
              +  +++ + YS I ++W+G+K    LK   LS+S  L  +   + A NLE+L LEGC
Sbjct: 675 FNPENLVDLELPYSSIKKVWEGVKDTPILKWANLSYSSKLTNLLGLSNAKNLERLNLEGC 734

Query: 466 TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTL 525
           T L ++   +     L+ LNM+ CTSL  L                    +S LK L   
Sbjct: 735 TSLLKLPQEMENMKSLVFLNMRRCTSLTCLQS----------------IKVSSLKILILS 778

Query: 526 DVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPV 585
           D S   K  EF  I E++E   EL+L+GTAI+GLP +   L+ LV+LN++ C  LE LP 
Sbjct: 779 DCS---KLEEFEVISENLE---ELYLDGTAIKGLPPAAGDLTRLVVLNMEGCTELESLPK 832

Query: 586 TVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP--SSIELL---TKL 640
            +   K L+ L LSGCSKL+  P +V+ MK L  L LDGT I+++P   S++ L     +
Sbjct: 833 RLGKQKALQELVLSGCSKLESVPTVVQDMKHLRILLLDGTRIRKIPKIKSLKCLCLSRNI 892

Query: 641 ELLNLSD---------------CKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
            ++NL D               C+NL  LPS     K L+ LN+ GC +LE+V   L
Sbjct: 893 AMVNLQDNLKDFYYLKCLVMKNCENLRYLPS---LPKCLEYLNVYGCERLESVENPL 946



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 199/438 (45%), Gaps = 79/438 (18%)

Query: 542  HMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEIL-PVTVSNLKCLRSLKLS 599
            + ++L  L+LEG T++  LP  +E +  LV LN++ C SL  L  + VS+LK L    LS
Sbjct: 722  NAKNLERLNLEGCTSLLKLPQEMENMKSLVFLNMRRCTSLTCLQSIKVSSLKIL---ILS 778

Query: 600  GCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSII 659
             CSKL++F  I    ++L EL+LDGT+IK +P +   LT+L +LN+  C  L  LP  + 
Sbjct: 779  DCSKLEEFEVI---SENLEELYLDGTAIKGLPPAAGDLTRLVVLNMEGCTELESLPKRLG 835

Query: 660  ALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVAL 719
              K+L+ L LSGC KLE+VP  +  ++ L  L + GT +         IP          
Sbjct: 836  KQKALQELVLSGCSKLESVPTVVQDMKHLRILLLDGTRIRK-------IP---------- 878

Query: 720  KLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLL 779
            K+ SL  LC  R  N+   NL +           +LK+ Y  K                 
Sbjct: 879  KIKSLKCLCLSR--NIAMVNLQD-----------NLKDFYYLK----------------- 908

Query: 780  NIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL----------LDALKLCKSDSTMIAC 829
             + +++C+ L+ LP LP  +  + V GC  L ++          LD L+  +S      C
Sbjct: 909  CLVMKNCENLRYLPSLPKCLEYLNVYGCERLESVENPLVSDRLFLDGLEKLRSTFLFTNC 968

Query: 830  LDSLKLLGNKSLAFSMLREYLEAVSNTRQH------LSVVVPGSEIPEWFMYQNEGSSIT 883
             +  +   +    ++  + +  AV    Q        +   PG  +P WF +Q  GS + 
Sbjct: 969  HNLFQDAKDSISTYAKWKCHRLAVECYEQDKVSGAFFNTCYPGYIVPSWFDHQAVGSVLE 1028

Query: 884  VTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYP---THQLNCHIGHGIY--GIGF 938
                 + YN   L G A+C V    +N   +   GS+    T Q     G   +   IG 
Sbjct: 1029 PRLEPHWYN-TMLSGIALCAVVSFHENQ--DPIIGSFSVKCTLQFENEDGSLRFDCDIGC 1085

Query: 939  RDKFGQAGSDHLWLLYLS 956
             ++ G   +DH+++ Y++
Sbjct: 1086 FNEPGMIEADHVFIGYVT 1103


>gi|358343904|ref|XP_003636035.1| Tir-nbs-lrr resistance protein, partial [Medicago truncatula]
 gi|355501970|gb|AES83173.1| Tir-nbs-lrr resistance protein, partial [Medicago truncatula]
          Length = 977

 Score =  331 bits (848), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 248/723 (34%), Positives = 383/723 (52%), Gaps = 76/723 (10%)

Query: 2   DSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS 61
           D     ++ L+   S++V++IG+ GMGG+GKTT+A  ++  +S +++ S F + V E+S 
Sbjct: 41  DENYWSVQSLIKFDSTEVQIIGLWGMGGIGKTTLATAMFQRVSFKYDGSCFFEKVTEVSK 100

Query: 62  KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAG 121
             G+     +LL +LLK  D  I        M+  RL+  K  +V+DDV + + LQ+L G
Sbjct: 101 SHGINYTCNKLLCKLLK-EDLDIDTPKLISSMIRRRLKSMKSFIVLDDVHNSELLQNLIG 159

Query: 122 -NREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
               W GSGS +I+T+RD+H+L + G+  +Y+   +N   +L++F++ AF    P    V
Sbjct: 160 VGHGWLGSGSTVIVTTRDKHVLISGGIKTIYEVKKMNSRNSLRIFSLNAFDKVSPKDGYV 219

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS R I YA G PLAL+VLGS L  +S  EW   L++L+  P +EI  I ++SF+ L +
Sbjct: 220 ELSKRAIDYARGNPLALKVLGSLLRCKSEKEWDCALDKLKKMPNNEIDSIFRMSFNELDK 279

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQ 299
            E+ IFLDIACFFKG +R+ +T  L  CGF   IGI  L++K L+ V + N + MH L+Q
Sbjct: 280 TEQNIFLDIACFFKGQERNSITKILNECGFFADIGISHLLDKALVRVDSENCIQMHGLIQ 339

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G+QIV+ +S +  G+RSRL   EEV  VL  + G+E VE I LD   +    +L   +
Sbjct: 340 EMGKQIVREESLKNPGQRSRLCDPEEVYDVLKNNRGSEKVEVIFLDATKY---THLILRS 396

Query: 360 KAFSKMTNLRLLKICN------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
            AF KM NLRLL + +      + LP+GL  L   LR + W GYPLK +P    ++  +E
Sbjct: 397 DAFEKMENLRLLAVQDHKGVKSISLPDGLGLLPENLRYILWDGYPLKTVPLTSSLEMLVE 456

Query: 414 IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPN---LEKLILEGCTRLYE 470
           + +  S + +LW G+ +L  L+++ LS S+ +I  P+ +G+PN   LE+LI+  C  L  
Sbjct: 457 LSLKQSHVEKLWNGVVNLPNLEIIDLSGSKKMIECPNVSGSPNLKDLERLIMNRCKSLKS 516

Query: 471 IHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK--SLPTTISGLKCLSTLDVS 528
           +  S      L  LN+ DC                 +NLK  S+P         S++D+S
Sbjct: 517 LS-SNTCSPALNFLNVMDC-----------------INLKEFSIP--------FSSVDLS 550

Query: 529 ---GDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPV 585
               +    E P  + H ++L           G P+S      LV L +  C  + +   
Sbjct: 551 LYFTEWDGNELPSSILHTQNLKGF--------GFPIS----DCLVDLPVNFCNDIWLSSP 598

Query: 586 TVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNL 645
             S      +L      K+   P  V S+K L+  F +   + E+P+SI LL+ LE L L
Sbjct: 599 LNSEHDSFITL-----DKVLSSPAFV-SVKILT--FCNINILSEIPNSISLLSSLETLRL 650

Query: 646 SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE--------TLGQIESLEELDISGTA 697
                ++ LP +I  L  L  +N+  C  L+++P              ESLEE+  S T+
Sbjct: 651 IKMP-IISLPETIKYLPRLIRVNVYYCELLQSIPALQRFIPKLLFWDCESLEEV-FSSTS 708

Query: 698 VPH 700
            P+
Sbjct: 709 EPY 711



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 133/521 (25%), Positives = 216/521 (41%), Gaps = 94/521 (18%)

Query: 544  EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            E+L  +  +G  ++ +PL+  L   LV L+LK    +E L   V NL  L  + LSG  K
Sbjct: 430  ENLRYILWDGYPLKTVPLTSSL-EMLVELSLKQSH-VEKLWNGVVNLPNLEIIDLSGSKK 487

Query: 604  LKKFPEIVRS--MKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVR-------- 653
            + + P +  S  +KDL  L ++     +  SS      L  LN+ DC NL          
Sbjct: 488  MIECPNVSGSPNLKDLERLIMNRCKSLKSLSSNTCSPALNFLNVMDCINLKEFSIPFSSV 547

Query: 654  -------------LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
                         LPSSI+  ++LK         L ++P            DI   + P 
Sbjct: 548  DLSLYFTEWDGNELPSSILHTQNLKGFGFPISDCLVDLPVNFCN-------DI-WLSSPL 599

Query: 701  STSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
            ++   S+I ++        K+ S     S++ L   + N++   +P+ I  L SL+ L L
Sbjct: 600  NSEHDSFITLD--------KVLSSPAFVSVKILTFCNINIL-SEIPNSISLLSSLETLRL 650

Query: 761  SKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDAL--- 817
             K   +SLP +I +L +L+ + +  C+ LQS+P L   I ++    C SL  +  +    
Sbjct: 651  IKMPIISLPETIKYLPRLIRVNVYYCELLQSIPALQRFIPKLLFWDCESLEEVFSSTSEP 710

Query: 818  --KLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQ-----HLSVV--VPGSE 868
              K     + ++ C++         L  SM    L A  N+       H+ ++  +PG E
Sbjct: 711  YDKPTPVSTVLLNCVELDPHSYQTVLKDSMGGIELGARKNSENEDAHDHIILIPAMPGME 770

Query: 869  IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCV-------FHV-------LKNSRGN 914
               WF Y +   S+T+  PSN      L+G+A   V       F V       L+NS G 
Sbjct: 771  --NWFHYPSTEVSVTLELPSN------LLGFAYYVVLSQGHMGFDVGFGCECNLENSSGE 822

Query: 915  N-CFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEP 973
              C  S+   +LN      I    + D      SDHL + Y  R +C  I   +E     
Sbjct: 823  RICITSF--KRLN------IKKCDWTDTSIDMMSDHLLVWYDPR-SCKQIMDAVEQTKAI 873

Query: 974  FESNHVN----VSFEPWLGQGL----EVKMCGLHPVYMDEV 1006
             + N  +    ++F  ++ + L    E+K CG   +Y +E 
Sbjct: 874  SDGNSTSYTPKLTFTFFIDETLYDEVEIKECGFRWIYQEET 914


>gi|15241609|ref|NP_199300.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|2660663|gb|AAC79134.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|10177477|dbj|BAB10868.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007787|gb|AED95170.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1170

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 235/717 (32%), Positives = 360/717 (50%), Gaps = 63/717 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++ R +++   +D  S + + +GI GM G+GKTT+A  +Y    H+FE S F  +  +++
Sbjct: 258 IEPRLKEMEEKLDFDSLETKTVGIVGMPGIGKTTLAETLYRKWEHKFERSMFFPDASKMA 317

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           ++ G+  LQ++LL +LLK  + +I    +  +     L  KKV LVID+V   +Q+++L 
Sbjct: 318 NEHGMCWLQKRLLEELLKDTNLNIGYTTNEHEFCKDVLLLKKVFLVIDNVSSEEQIETLF 377

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G   W  +GS+I+ITS DE +LK   V + Y    LN  ++L  F   AF         V
Sbjct: 378 GKWNWIKNGSKIVITSSDESMLKGF-VKDTYVVPSLNSRDSLLWFTNHAFGLDDAQGNLV 436

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS   + YA G PLAL   G  L G+   +W   ++ L +     I D+L+  +D L E
Sbjct: 437 KLSKHFLNYAKGNPLALGAFGVELCGKDKADWEKRIKTLTLISNKMIQDVLRRRYDELTE 496

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIG---IRVLIEKCLITVHNNTLWMHDL 297
            +K IFLD+ACFFK  +  YV + +  C          I  L  K L+ +    + MHD+
Sbjct: 497 RQKDIFLDVACFFKSENESYVRHVVNSCDSESTKSWDEITDLKGKFLVNISGGRVEMHDI 556

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           L    +++  +   E+     RLW  +++   L      E V GI LD      E+    
Sbjct: 557 LCTFAKELASQALTEDTRVHLRLWNYQDIMWFLNNELEMENVRGIFLDMSKVPEEMTF-- 614

Query: 358 SAKAFSKMTNLRLLKI----CNLQLPNGLEYLS--------NRLRLLGWRGYPLKFLPSN 405
               FS M NLR LKI    C+ +     ++ +        +++R L W  YP + LPS+
Sbjct: 615 DGNIFSNMCNLRYLKIYSSVCHKEGEGIFKFDTVREIQLPLDKVRYLHWMKYPWEKLPSD 674

Query: 406 LQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
              +  +++ + YS I ++W+G+K    LK   LS+S  L  +   + A NLE+L LEGC
Sbjct: 675 FNPENLVDLELPYSSIKKVWEGVKDTPILKWANLSYSSKLTNLLGLSNAKNLERLNLEGC 734

Query: 466 TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTL 525
           T L ++   +     L+ LNM+ CTSL  L                    +S LK L   
Sbjct: 735 TSLLKLPQEMENMKSLVFLNMRRCTSLTCLQS----------------IKVSSLKILILS 778

Query: 526 DVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPV 585
           D S   K  EF  I E++E   EL+L+GTAI+GLP +   L+ LV+LN++ C  LE LP 
Sbjct: 779 DCS---KLEEFEVISENLE---ELYLDGTAIKGLPPAAGDLTRLVVLNMEGCTELESLPK 832

Query: 586 TVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP-------------- 631
            +   K L+ L LSGCSKL+  P  V+ MK L  L LDGT I+++P              
Sbjct: 833 RLGKQKALQELVLSGCSKLESVPTDVKDMKHLRLLLLDGTRIRKIPKIKSLKCLCLSRNI 892

Query: 632 ------SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
                  +++  + L+ L + +C+NL  LPS     K L+ LN+ GC +LE+V   L
Sbjct: 893 AMVNLQDNLKDFSNLKCLVMKNCENLRYLPS---LPKCLEYLNVYGCERLESVENPL 946



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 199/441 (45%), Gaps = 83/441 (18%)

Query: 542  HMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEIL-PVTVSNLKCLRSLKLS 599
            + ++L  L+LEG T++  LP  +E +  LV LN++ C SL  L  + VS+LK L    LS
Sbjct: 722  NAKNLERLNLEGCTSLLKLPQEMENMKSLVFLNMRRCTSLTCLQSIKVSSLKIL---ILS 778

Query: 600  GCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSII 659
             CSKL++F  I    ++L EL+LDGT+IK +P +   LT+L +LN+  C  L  LP  + 
Sbjct: 779  DCSKLEEFEVI---SENLEELYLDGTAIKGLPPAAGDLTRLVVLNMEGCTELESLPKRLG 835

Query: 660  ALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVAL 719
              K+L+ L LSGC KLE+VP  +  ++ L  L + GT +                     
Sbjct: 836  KQKALQELVLSGCSKLESVPTDVKDMKHLRLLLLDGTRIR-------------------- 875

Query: 720  KLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKN-SFVSLPTSITHLSKL 778
            K+P +                             SLK L LS+N + V+L  ++   S L
Sbjct: 876  KIPKIK----------------------------SLKCLCLSRNIAMVNLQDNLKDFSNL 907

Query: 779  LNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL------------LDALKLCKSDSTM 826
              + +++C+ L+ LP LP  +  + V GC  L ++            LD  +  +S    
Sbjct: 908  KCLVMKNCENLRYLPSLPKCLEYLNVYGCERLESVENPLVADRLTLFLDRSEELRSTFLF 967

Query: 827  IACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHL------SVVVPGSEIPEWFMYQNEGS 880
              C +  +   +    ++  + +  AV    Q +      +   PG  +P WF +Q  GS
Sbjct: 968  TNCHNLFQDAKDSISTYAKWKCHRLAVECYEQDIVSGAFFNTCYPGYIVPSWFDHQAVGS 1027

Query: 881  SITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYP---THQLNCHIGHGIY--G 935
             +      + YN   L G A+C V    +N   +   GS+    T Q     G   +   
Sbjct: 1028 VLEPRLEPHWYN-TMLSGIALCAVVSFHENQ--DPIIGSFSVKCTLQFENEDGSLRFDCD 1084

Query: 936  IGFRDKFGQAGSDHLWLLYLS 956
            IG  ++ G   +DH+++ Y++
Sbjct: 1085 IGCLNEPGMIEADHVFIGYVT 1105


>gi|357499697|ref|XP_003620137.1| Resistance protein [Medicago truncatula]
 gi|355495152|gb|AES76355.1| Resistance protein [Medicago truncatula]
          Length = 1257

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 333/1133 (29%), Positives = 522/1133 (46%), Gaps = 214/1133 (18%)

Query: 11   LMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQ 69
            L++ GS D + M+GI G+GG+GKTT+A  VY+ I  +F+ S FL+ VRE S K GL+ LQ
Sbjct: 191  LLNVGSDDAIHMVGIHGIGGIGKTTLALEVYNSIVCQFQGSCFLEKVRENSDKNGLIYLQ 250

Query: 70   RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG 129
            + LLSQ+    +  + +V  GI ML  RL +KK+LL++DDV +++QL+++AG   WFG G
Sbjct: 251  KILLSQIFGEKNIELTSVGQGISMLRQRLHQKKILLLLDDVDNLEQLEAIAGRSVWFGPG 310

Query: 130  SRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKT-YQP------------- 175
            SR+IIT+RD+ LL  H ++  Y+ +GLN ++A  L   KA K  Y P             
Sbjct: 311  SRVIITTRDKRLLTRHEIEITYEVNGLNDEDAFDLIRWKALKNKYSPSYKDILFVTKYGR 370

Query: 176  ---------LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSE 226
                         V +  R + YA GLPLALEV+GS    ++++E +  L+R E  P  +
Sbjct: 371  ELMDMNDKVFSGYVHVLKRAVAYASGLPLALEVIGSHFFNKTIEECKCALDRYERVPDKK 430

Query: 227  ILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVI---GIRVLIEKC 283
            I   LQ+SF+ LQE EK +FLDIAC FKG     V   L     H  I    I  L+EK 
Sbjct: 431  IQTTLQLSFNALQEEEKSVFLDIACCFKGWKLKRVEEILH--AHHGDIMKDHINALVEKS 488

Query: 284  LITV-HNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTEST-------- 334
            LI V  +  L +HDL++++G++IV+++SPE  GKRSRLW  +++  VL E+T        
Sbjct: 489  LIKVSESGNLTLHDLVEDMGKEIVRQESPENPGKRSRLWSSKDIIRVLEENTVSNNDMDD 548

Query: 335  -GTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICN-LQLPNGLEYLSNRLRLL 392
             GT  +E I  D +     + +    +AF KM NL+ L   N +      ++L N LR+L
Sbjct: 549  LGTSKIEIIYFDRW-----IRVEWDGEAFKKMENLKTLIFSNDVFFSKNPKHLPNSLRVL 603

Query: 393  GWRGYPLKFLPSNLQM-DKTIEIYMCYSRIGELWKGI----KHLDKLKVMILSHSENLIR 447
              R +  K+  S+  + D     ++        WKG        + ++V+ L HSE L  
Sbjct: 604  ECRYH--KYHSSDFHVHDDRCHFFIHPPSNPFEWKGFFTKASKFENMRVLNLDHSEGLAE 661

Query: 448  MPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLP----------- 496
            +P+ +G PNLE+  ++   ++  I  S+    KL I  +  C  + ++P           
Sbjct: 662  IPNISGLPNLEEFSIQNGEKVIAIDKSIGFLGKLKIFRIISCAEIRSVPPLSLASLEEIE 721

Query: 497  ------------------GK-----------------ILMKSLEKLN------LKSLPTT 515
                              GK                 +++ SLE+L+      L+S P  
Sbjct: 722  FSHCYSLESFPLMVNRFLGKLKILRVINCTKIKIIPSLILPSLEELDLSDCTGLESFPPL 781

Query: 516  ISGL-KCLSTLDVSGDLKFREFPEIVEHMEHLSELHL-EGTAIRGLPLSIE-----LLSG 568
            + G    L T+ V G +  R  P ++  +  L EL L +  ++   P+  +     +L  
Sbjct: 782  VDGFGDKLKTMSVRGCINIRSIPTLM--LASLEELDLSDCISLESFPIVEDGIPPLMLDS 839

Query: 569  LVLLNLKNCRSLEILPVTVSN-LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSI 627
            L  L+L NC +LE  P+ V   L  L++L +  C KL+  P +   +  L +L L     
Sbjct: 840  LETLDLSNCYNLESFPLVVDGFLGKLKTLLVGSCHKLRSIPPL--KLDSLEKLDLSYCCS 897

Query: 628  KEVPSSIE--LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK--LENVPETLG 683
             E   S+E  LL KL+ LN+  C  L  +P   + L SL+  NLS C+   LE+ P+ LG
Sbjct: 898  LESFLSVEDGLLDKLKFLNIECCVMLRNIP--WLKLTSLEHFNLSCCYSLDLESFPDILG 955

Query: 684  QIES-----LEELDISGTAVPHS-----------TSWYSYIPINL------------MRK 715
            ++ +     L+E  I     P                Y Y+P ++            M K
Sbjct: 956  EMRNIPGLLLDETTIEELPFPFQNLTQLQTFHPCNCEYVYVPSSMSKLAEFTIMNERMSK 1015

Query: 716  SVALKLPSLSGLCSLRKLN-----LTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPT 770
                 + +   + +++  +     + DC L +  L  ++    ++KEL+L+   F  LP 
Sbjct: 1016 VAEFTIQNEEKVYAIQSAHVKYICIRDCKLSDEYLSLNLMLFANVKELHLTNIQFTVLPK 1075

Query: 771  SITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACL 830
            SI     L  + L+DCK LQ +   PP+++ +    C SL +       CKS        
Sbjct: 1076 SIEKCHFLWKLVLDDCKDLQEIKGNPPSLKMLSALNCISLTS------SCKS-------- 1121

Query: 831  DSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNE-GSSITVTRPSN 889
                          ++++ L    NT   L    P ++IPEWF +Q+E G SI+      
Sbjct: 1122 -------------ILVKQELHEDGNTWFRL----PQTKIPEWFDHQSEAGLSIS------ 1158

Query: 890  LYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFG---QAG 946
             +   K    A+C V   L   R  +C        +   I    +      K G   QA 
Sbjct: 1159 FWFLNKFPAIALCVV-SPLTWYRSQHC--------VRVVINGDTFFYTHGSKIGAKSQAD 1209

Query: 947  SDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLH 999
            + HL L ++  +   D    ++ +L   + NH  V F      G +    G+H
Sbjct: 1210 TYHLHLFHMQTENFND---NMDKSLLENKWNHAKVYF------GFKFHKSGIH 1253


>gi|357513735|ref|XP_003627156.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355521178|gb|AET01632.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1473

 Score =  330 bits (846), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 241/675 (35%), Positives = 370/675 (54%), Gaps = 56/675 (8%)

Query: 22  IGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLAD 81
           +GI GMGG+GKT IA+V++  +  +++   F  N +E S          +L S+LLK  +
Sbjct: 203 LGIWGMGGMGKTIIAKVLFAKLFAQYDHVCFA-NAKEYS--------LSKLFSELLK-EE 252

Query: 82  NSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHL 141
            S  NV     M   RL+ +KVL+V+D++  + Q + L  +       SR+IIT+RD  L
Sbjct: 253 ISPSNVGSAFHM--RRLRSRKVLIVLDNMDSLDQFEYLCRDYGELNKDSRLIITTRDRQL 310

Query: 142 LKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLG 201
           L +  VD +Y+     Y ++L+LF ++AF+   P ++   L  R I YAGG+PLAL++L 
Sbjct: 311 L-SGRVDWIYEVKQWEYPKSLELFCLEAFEPSNPREKYEHLLQRAITYAGGVPLALKLLA 369

Query: 202 SFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYV 261
             L  R +  W S+ ++L+     ++  +L++S+D L  LEKKIFLDIA FF G  ++ V
Sbjct: 370 LHLRTRDIAFWESSFKKLDDHRDDKLHKVLKVSYDELDALEKKIFLDIAFFFIGEKKESV 429

Query: 262 TNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWMHDLLQELGQQIVQRQSPEELGKRSRL 320
           T  L+ CGF P  GI VL +K LIT+ NN T+ MHDLLQ++G  I+     E+    +RL
Sbjct: 430 TKILDACGFEPNSGIVVLKDKALITISNNQTIQMHDLLQKMGSDIICNDCGEDPAAHTRL 489

Query: 321 WKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI---CNLQ 377
               +   V+ E+ G+  +EGI LD   + +   L  SA  F+KM  LR+LK     NLQ
Sbjct: 490 -SGSKARAVIEENKGSSSIEGITLDLSQNND---LPLSADTFTKMKALRILKFHAPSNLQ 545

Query: 378 --------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIK 429
                   LP  LE  SN+LR   W GYP + LP +      +EI M +S + +LW+G K
Sbjct: 546 RCTNTYLNLPKFLEPFSNKLRYFEWNGYPFESLPQHFYAKFLVEIRMPHSNVKQLWQGTK 605

Query: 430 HLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDC 489
            L KL+ + LS  +   ++P+F+ A +L+ + L GC  L ++HPS+L  + L+ L +  C
Sbjct: 606 ELGKLEGIDLSECKQFEKLPNFSKASSLKWVNLSGCESLVDLHPSVLCADTLVTLILDRC 665

Query: 490 TSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSEL 549
           T +  + G+  +  LEK+       ++ G K L    VS DL              +  L
Sbjct: 666 TKVRRVRGEKHLNFLEKI-------SVDGCKSLEEFAVSSDL--------------IENL 704

Query: 550 HLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS---KLKK 606
            L  T I+ L LSI  L  L  LNL++ R L  +P  +S+++ +R LK+SG     + K+
Sbjct: 705 DLSSTGIKTLDLSIGRLQKLKQLNLESLR-LNRIPKELSSVRSIRELKISGSRLIVEKKQ 763

Query: 607 FPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLK 665
             E+   ++ L  L + D  +  E+P+++ + +KL  LNL D  N+  LP SI  L+ L+
Sbjct: 764 LHELFDGLQSLQILHMKDFINQFELPNNVHVASKLMELNL-DGSNMKMLPQSIKKLEELE 822

Query: 666 TLNLSGCFKLENVPE 680
            L+L  C KLE +PE
Sbjct: 823 ILSLVNCRKLECIPE 837



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 188/413 (45%), Gaps = 56/413 (13%)

Query: 567  SGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLS---ELFLD 623
            S L  +NL  C SL  L  +V     L +L L  C+K+++    VR  K L+   ++ +D
Sbjct: 631  SSLKWVNLSGCESLVDLHPSVLCADTLVTLILDRCTKVRR----VRGEKHLNFLEKISVD 686

Query: 624  G-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
            G  S++E   S +L+  L+L        +  L  SI  L+ LK LNL    +L  +P+ L
Sbjct: 687  GCKSLEEFAVSSDLIENLDL----SSTGIKTLDLSIGRLQKLKQLNLES-LRLNRIPKEL 741

Query: 683  GQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLME 742
              + S+ EL ISG+ +             ++ K    +L    GL SL+ L++ D  + +
Sbjct: 742  SSVRSIRELKISGSRL-------------IVEKKQLHEL--FDGLQSLQILHMKDF-INQ 785

Query: 743  GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
              LP+++     L EL L  ++   LP SI  L +L  + L +C++L+ +P+LPP I  +
Sbjct: 786  FELPNNVHVASKLMELNLDGSNMKMLPQSIKKLEELEILSLVNCRKLECIPELPPLITLL 845

Query: 803  RVNGCASLVTLLDALKLCKS---DSTMIACLDSLKLLGN------KSLAFSMLREYLEAV 853
                C SLV++ +  KL       +  I+  +SL L G+      +SL  +M+      V
Sbjct: 846  NAVNCTSLVSVSNLKKLATKMIGKTKHISFSNSLNLDGHSLGLIMESLNLTMMSAVFHNV 905

Query: 854  SNTRQHLSVVVP----------GSEIPEWFM-YQNEGSSITVTRPSNLYNKKKLVGYAIC 902
            S  R  ++V             G+ IP  F       SSIT+T    L ++  L+G+   
Sbjct: 906  SVRRLRVAVRSYNYNSVDACQLGTSIPRLFQCLTASDSSITITL---LPDRSNLLGFIYS 962

Query: 903  CVFHVLKNSRGNNCFGSYPTHQLNCHIG-HGIYGIGFRDKFGQAGSDHLWLLY 954
                VL  + GN   G     +  C++G  GI          +  SDH+++ Y
Sbjct: 963  V---VLSPAGGNGMKGGGARIKCQCNLGEEGIKATWLNTDVTELNSDHVYVWY 1012


>gi|357474817|ref|XP_003607694.1| NBS-LRR resistance-like protein 4F [Medicago truncatula]
 gi|355508749|gb|AES89891.1| NBS-LRR resistance-like protein 4F [Medicago truncatula]
          Length = 962

 Score =  330 bits (846), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 232/598 (38%), Positives = 333/598 (55%), Gaps = 74/598 (12%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS-KGG 64
           EKL  L+DS   DV+ +GICGMGG+GKTT+ RV+YD ISH+F A  F+D+V ++     G
Sbjct: 210 EKL-LLLDS-VDDVQAVGICGMGGIGKTTLGRVLYDRISHQFGACCFIDDVSKMFRLHDG 267

Query: 65  LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNRE 124
            + +Q+Q+L Q      N I N+    +++  RL R++VLL+ D+V  V+QL+ +     
Sbjct: 268 PLGVQKQILYQTHGEEHNQICNLSTASNLIRRRLCRQRVLLIFDNVDKVEQLEKIGV--- 324

Query: 125 WFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSA 184
                        DEH+LK  GVDEVYK   L+   +LQL   KAFK             
Sbjct: 325 -------------DEHILKFFGVDEVYKVPLLDRTNSLQLLCRKAFKL-----------D 360

Query: 185 RIIRYAGGLPLALEV-LGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEK 243
            I+    G  +A  + L + L+G+    W     RL   P  +++D+L++SFDGL+E EK
Sbjct: 361 HILSSMKGWSMAYYIMLRTSLNGKV--HW----PRLRDSPDKDVMDVLRLSFDGLEESEK 414

Query: 244 KIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-------TLWMHD 296
           +IFL IACFF  +   YV N L  CGFH  IG+RVLI+K LI++  +       ++ MH 
Sbjct: 415 EIFLHIACFFNPSMEKYVKNVLNCCGFHADIGLRVLIDKSLISIDESFSSLKEESISMHG 474

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD----NYHHENE 352
           LL+ELG++IVQ  S +E  K SRLW E +V +V+ E      VE I+L     N   E +
Sbjct: 475 LLEELGRKIVQENSSKEPRKWSRLWLETQVDNVMLEKMERR-VEAILLKKKTLNKDDEKK 533

Query: 353 VYLCASAKAFSKMTNLRLLKI-CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           V +    +  SKM +LRLL I  ++     L  LSN LR + W  YP K+LPS+ Q ++ 
Sbjct: 534 VMI---VEHLSKMRHLRLLIIWSHVNTSGSLNCLSNELRYVEWSEYPFKYLPSSFQPNQL 590

Query: 412 IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
           +E+ +  S I +LW+  K+L  L+ + LSHS+NLI+MP F   PNLE+L LEGC +L +I
Sbjct: 591 VELILKSSSIEQLWEDKKYLRNLRNLDLSHSKNLIKMPHFGEFPNLERLDLEGCIKLVQI 650

Query: 472 HPSLLLHNKLIILNMKDCTSLITLPGKIL-MKSLEKLNLKSLPTTISGLKCLSTLDVSGD 530
            PS+ L  KL+ LN+KDC  +I+L   I  +  L+ LN+  L +     KC+ T  ++  
Sbjct: 651 DPSIGLLTKLVYLNLKDCKHIISLLSNIFGLSCLDDLNIYVLQSKEFECKCI-TFPINDI 709

Query: 531 LKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS 588
           L     P ++ H                   S+  LS LV LNL++C+ LE LPV  S
Sbjct: 710 LPHVALPFLISH-------------------SLRELSKLVYLNLEHCKLLESLPVLPS 748



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 123/298 (41%), Gaps = 58/298 (19%)

Query: 456 NLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTT 515
            ++ ++LE   R  E   ++LL  K   LN  D   ++ +     M+ L  L + S   T
Sbjct: 503 QVDNVMLEKMERRVE---AILLKKK--TLNKDDEKKVMIVEHLSKMRHLRLLIIWSHVNT 557

Query: 516 ISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLK 575
              L CLS      +L++ E+ E                  + LP S +  + LV L LK
Sbjct: 558 SGSLNCLS-----NELRYVEWSEY---------------PFKYLPSSFQP-NQLVELILK 596

Query: 576 NCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSI 634
           +  S+E L      L+ LR+L LS    L K P       +L  L L+G   + ++  SI
Sbjct: 597 SS-SIEQLWEDKKYLRNLRNLDLSHSKNLIKMPHF-GEFPNLERLDLEGCIKLVQIDPSI 654

Query: 635 ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
            LLTKL  LNL DCK+++ L S+I  L  L  LN                I  L+  +  
Sbjct: 655 GLLTKLVYLNLKDCKHIISLLSNIFGLSCLDDLN----------------IYVLQSKEFE 698

Query: 695 GTAVPHSTSWYSYIPINLMRKSVALKL---PSLSGLCSLRKLNLTDCNLMEG--ALPS 747
              +          PIN +   VAL      SL  L  L  LNL  C L+E    LPS
Sbjct: 699 CKCIT--------FPINDILPHVALPFLISHSLRELSKLVYLNLEHCKLLESLPVLPS 748



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 36/187 (19%)

Query: 617 LSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
           L EL L  +SI+++    + L  L  L+LS  KNL+++P       +L+ L+L GC KL 
Sbjct: 590 LVELILKSSSIEQLWEDKKYLRNLRNLDLSHSKNLIKMPH-FGEFPNLERLDLEGCIKLV 648

Query: 677 NVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLT 736
            +  ++G +  L  L++                     K +   L ++ GL  L  LN+ 
Sbjct: 649 QIDPSIGLLTKLVYLNLKDC------------------KHIISLLSNIFGLSCLDDLNIY 690

Query: 737 DCNLME---GALPSDIGNLCSLKELYLSKNSFVSLPTSITH----LSKLLNIELEDCKRL 789
                E     +   I ++             V+LP  I+H    LSKL+ + LE CK L
Sbjct: 691 VLQSKEFECKCITFPINDILP----------HVALPFLISHSLRELSKLVYLNLEHCKLL 740

Query: 790 QSLPQLP 796
           +SLP LP
Sbjct: 741 ESLPVLP 747


>gi|297790638|ref|XP_002863204.1| hypothetical protein ARALYDRAFT_333042 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309038|gb|EFH39463.1| hypothetical protein ARALYDRAFT_333042 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 916

 Score =  330 bits (845), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 264/702 (37%), Positives = 369/702 (52%), Gaps = 98/702 (13%)

Query: 15  GSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKG-GLVSLQRQLL 73
           GS D + IGICGMGG+GKTT+A+ VY+  S  FE + FL+N +E S K  G + LQR+LL
Sbjct: 183 GSDDAQTIGICGMGGIGKTTLAKAVYNQFSDRFEGTSFLENFKEYSKKPEGKIHLQRKLL 242

Query: 74  SQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRII 133
           S + K  D    N              ++VL+VIDDV DV QL S+  +   FG GSRII
Sbjct: 243 SDITKNNDQVFRN--------------RRVLVVIDDVEDVDQLASVGIDLSCFGPGSRII 288

Query: 134 ITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGL 193
           ITSRD HLL+   V+ +Y P+ LN +++L+L  + AF+T                    L
Sbjct: 289 ITSRDMHLLELLKVENIYLPNALNSEKSLKLIRLHAFRTR-------------------L 329

Query: 194 PLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFF 253
           PLA+EVL SFL  RS+ EW+STL+ L+  P   I   L+ISFD L   +K IFLDI+CFF
Sbjct: 330 PLAMEVLDSFLFKRSISEWKSTLKSLKSLPNDNIQAKLEISFDALNAFQKDIFLDISCFF 389

Query: 254 KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEE 313
            G D+DYV   L+GC  +P IG+ VL E+CLIT H+N L MHDLL+++G+ IV+    E 
Sbjct: 390 IGVDKDYVRCILDGCDLYPDIGLSVLKERCLITFHDNRLMMHDLLRDMGRHIVR----ER 445

Query: 314 LGKRSRLWKEEEVCHVL-TESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLK 372
           L K  +   +  +  +L  E T  E +E                   KAFS +T LRLL+
Sbjct: 446 LQKNVKDGVDYGIMLILKAEVTSVENLE------------------VKAFSNLTMLRLLQ 487

Query: 373 ICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELW---KGIK 429
           + ++ L        NRLR L W G+PL  +P++ ++   + + M YS +  LW   K  +
Sbjct: 488 LSHVHLNGSYANFPNRLRWLCWLGFPLHSIPTDFRLGSLVILDMQYSNLKRLWGDGKQPQ 547

Query: 430 HLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL-LLHNKLIILNMKD 488
            L +LK + LSHS  L   PDF+  PNLEKL+L  C  L  +H S+  LH KLI+LN+KD
Sbjct: 548 SLKELKYLDLSHSIQLTDTPDFSNLPNLEKLLLINCKSLVRVHKSIGTLHEKLILLNLKD 607

Query: 489 CTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSE 548
           CT L  LP ++ M                 LK L TL VSG +K       +  M+ L+ 
Sbjct: 608 CTKLGDLPLELYM-----------------LKSLETLIVSGCVKLERLDNALRDMKSLTT 650

Query: 549 LHLEGTAIRGLPLSIELLSGLVLLNLK-------NCRSLEILPVTVSNL------KCLRS 595
           L    TAI  +P     L  L L   K       N  S E    T+S L       CL++
Sbjct: 651 LKANYTAITQIPYMSNQLEELSLDGCKELWKVRDNTHSDESPQATLSLLFPLNVISCLKT 710

Query: 596 LKLSGCSKLKKF-PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRL 654
           L+L  C+   +  P+ + S+  L EL L G + + +      L+ L++L +  C  L   
Sbjct: 711 LRLGSCNLSDELVPKNLGSLSCLEELDLQGNNFRNLQMDFAGLSSLQILKVDSCSEL--- 767

Query: 655 PSSIIAL-KSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
             S+ +L K L++   S C  LE  P+ L +   L+ L ++ 
Sbjct: 768 -QSMFSLPKRLRSFYASNCIMLERTPD-LSECSVLQSLHLTN 807



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 215/455 (47%), Gaps = 50/455 (10%)

Query: 485 NMKDCTSL-ITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHM 543
           N+KD     I L  K  + S+E L +K+  + ++ L+ L    V  +  +  FP      
Sbjct: 449 NVKDGVDYGIMLILKAEVTSVENLEVKAF-SNLTMLRLLQLSHVHLNGSYANFPN----- 502

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLK--NCRSLEILPVTVSNLKCLRSLKLSGC 601
             L  L   G  +  +P    L S LV+L+++  N + L        +LK L+ L LS  
Sbjct: 503 -RLRWLCWLGFPLHSIPTDFRLGS-LVILDMQYSNLKRLWGDGKQPQSLKELKYLDLSHS 560

Query: 602 SKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELL-TKLELLNLSDCKNLVRLPSSII 659
            +L   P+   ++ +L +L L +  S+  V  SI  L  KL LLNL DC  L  LP  + 
Sbjct: 561 IQLTDTPDF-SNLPNLEKLLLINCKSLVRVHKSIGTLHEKLILLNLKDCTKLGDLPLELY 619

Query: 660 ALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHSTSWYSYIPINLMRK- 715
            LKSL+TL +SGC KLE +   L  ++SL  L  + TA+   P+ ++    + ++  ++ 
Sbjct: 620 MLKSLETLIVSGCVKLERLDNALRDMKSLTTLKANYTAITQIPYMSNQLEELSLDGCKEL 679

Query: 716 ---------------SVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
                          +++L  P L+ +  L+ L L  CNL +  +P ++G+L  L+EL L
Sbjct: 680 WKVRDNTHSDESPQATLSLLFP-LNVISCLKTLRLGSCNLSDELVPKNLGSLSCLEELDL 738

Query: 761 SKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL--------VT 812
             N+F +L      LS L  ++++ C  LQS+  LP  +R    + C  L         +
Sbjct: 739 QGNNFRNLQMDFAGLSSLQILKVDSCSELQSMFSLPKRLRSFYASNCIMLERTPDLSECS 798

Query: 813 LLDALKLCKSDSTM-IACLDSLKLLG--NKSLAFSMLREYLEAVSN---TRQHLSVVVPG 866
           +L +L L    + +    LD LK +G  +  +   +  +Y E++        +  + +PG
Sbjct: 799 VLQSLHLTNCFNLVETPGLDKLKTVGVIHMEMCNRISTDYRESIMQGWAVGANGGIFIPG 858

Query: 867 SEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAI 901
           S +P W  ++NE  SI+ T P +L     LVG+ +
Sbjct: 859 SSVPNWVSFKNERHSISFTVPESL--NADLVGFTL 891


>gi|357518005|ref|XP_003629291.1| Resistance protein [Medicago truncatula]
 gi|355523313|gb|AET03767.1| Resistance protein [Medicago truncatula]
          Length = 1039

 Score =  329 bits (843), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 243/648 (37%), Positives = 357/648 (55%), Gaps = 50/648 (7%)

Query: 11  LMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQ 69
           L+D GS D V MIGI G GG+GKTT+A  VY+LI+  FEA  FL+NVRE S+K GL  LQ
Sbjct: 208 LLDIGSDDEVNMIGIHGSGGIGKTTLALAVYNLIADHFEALCFLENVRENSNKHGLQHLQ 267

Query: 70  RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG 129
           + LLS+ L      + +V  GI ++  RLQ+KKVLL++DDV  ++QL++L G   W GSG
Sbjct: 268 KILLSETLGEKKIKLTSVKQGISIIKHRLQQKKVLLILDDVDKIEQLEALVGGFYWLGSG 327

Query: 130 SRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRY 189
           SR+IIT+RD+HLL +HGV   Y+ + LN  +AL+L   KAFKT         +  R + Y
Sbjct: 328 SRVIITTRDKHLLSSHGVKRTYEVNVLNEKDALRLLTWKAFKTEVFHPSYFDVLKRAVGY 387

Query: 190 AGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDI 249
           A GLPLAL V+GS L G+++ EW S L R EI P  EI +IL++SFD L+E EK +FLD+
Sbjct: 388 ASGLPLALIVIGSNLFGKNIQEWESALHRYEIIPNKEIQNILKVSFDALEEDEKSVFLDM 447

Query: 250 ACFFKG------NDRDYVTNFLEGC-GFHPVIGIRVLIEKCLITVHNNTLWM-HDLLQEL 301
           AC + G      N  + +    + C  +H    I VL+EK LI +     ++ HDL+ ++
Sbjct: 448 ACIYIGKEYQLANMENMLYAHFDACMKYH----IGVLVEKSLIKISWTGKYIVHDLIGDM 503

Query: 302 GQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKA 361
            ++IV+ +SP+E GKRSRLW  E++  VL +++GT  ++ I L     ++EV L  S  A
Sbjct: 504 AKEIVRLESPDEPGKRSRLWFHEDIIQVLEDNSGTSAIKSIYL--MECDDEVELDES--A 559

Query: 362 FSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRI 421
           F  M NL+ L I       G ++L N LR++ W  YP ++ P +    K     +  S +
Sbjct: 560 FKNMKNLKTLIIKGGHFSKGPKHLPNSLRVVEWWNYPSEYFPYDFNPKKLAIFELPKSSL 619

Query: 422 G--ELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
              +L   +K    +K++    +E L  +PD +   NLE    + C  L  IH S+    
Sbjct: 620 MSLKLTDLMKKFLNMKILNFDDAEFLTEIPDTSSLLNLELFSFKRCKNLTTIHESVGFLE 679

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
           KL +L+ + C  L   P  I + SLE+LN                  VS       FPEI
Sbjct: 680 KLKVLSAQGCRKLRKFP-PIKLISLEELN------------------VSFCTNLESFPEI 720

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
           +  ME++  L LE T+ + +P S + L+ L  L L+ C   + LP  +  +  L  + + 
Sbjct: 721 LGKMENMKNLVLEETSFKEMPNSFQNLTHLQTLQLRCCGVFK-LPSCILTMPKLVEI-IG 778

Query: 600 GCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
             S+  +FP+   +   +S +         VPS++E L +L   NLSD
Sbjct: 779 WVSEGWQFPKSDEAEDKVSSM---------VPSNVESL-RLTFCNLSD 816



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 142/343 (41%), Gaps = 77/343 (22%)

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
           S+  L  L +L+ + CR L   P     L  L  L +S C+ L+ FPEI+  M+++  L 
Sbjct: 674 SVGFLEKLKVLSAQGCRKLRKFPPI--KLISLEELNVSFCTNLESFPEILGKMENMKNLV 731

Query: 622 LDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPET 681
           L+ TS KE+P+S + LT L+ L L  C  + +LPS I+ +  L               E 
Sbjct: 732 LEETSFKEMPNSFQNLTHLQTLQLR-CCGVFKLPSCILTMPKL--------------VEI 776

Query: 682 LGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLM 741
           +G +         G   P S               V+  +PS     ++  L LT CNL 
Sbjct: 777 IGWVS-------EGWQFPKSDE---------AEDKVSSMVPS-----NVESLRLTFCNLS 815

Query: 742 EGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQ 801
           +  +P  +    ++KEL+L+ N+F  LP  I     L  + +++C  LQ +  + PN++ 
Sbjct: 816 DEFVPIILTWFVNVKELHLAHNNFTILPECIKECHLLRVLCVDECHYLQEVRGIAPNLKI 875

Query: 802 VRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLS 861
           +   GC SL                  C +             M +E  EA S       
Sbjct: 876 LYARGCKSL-----------------TCTEMF-----------MNQELHEAGSTM----- 902

Query: 862 VVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCV 904
             +P S IP+WF + +   S      S  + + K    A+C V
Sbjct: 903 FYLPRSRIPDWFEHCSSNGS------SFFWFRNKFPAIALCLV 939


>gi|82542035|gb|ABB82025.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 735

 Score =  328 bits (842), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 201/481 (41%), Positives = 302/481 (62%), Gaps = 11/481 (2%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD     +   + + +  VR++GI GM G+GKTTIA+VV++ + + FE S FL N+ E S
Sbjct: 232 MDRLAHNIFDFLSTATDHVRIVGIHGMPGIGKTTIAKVVFNQLCYGFEGSCFLSNINETS 291

Query: 61  SK-GGLVSLQRQLLSQLLKLADNSIWNVFD-GIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            +  GL  LQRQLL  +LK  D +  N  D G  ++  RL+RK+V++V DDV    QL++
Sbjct: 292 KQFNGLALLQRQLLHDILK-QDAANINCDDRGKVLIKERLRRKRVVVVADDVAHQDQLKA 350

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G R WFG GS +IIT+RD +LL+    D+ Y    L  DE+LQLF+  A +  +P ++
Sbjct: 351 LMGERSWFGPGSIVIITTRDSNLLRE--ADQTYPIEELTPDESLQLFSWHALRDTKPTED 408

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
            ++LS  ++ Y GGLPLALEV+G+ LSG++ D W+S +++L   P  +I   L+ISFD L
Sbjct: 409 YIELSKDVVDYCGGLPLALEVMGACLSGKNRDGWKSVIDKLRRIPNRDIQGKLRISFDSL 468

Query: 239 QELE-KKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
              E +  FLDIACFF    ++YV   L   CG++P + ++ L E+ LI V   T+ MHD
Sbjct: 469 DGEELQNAFLDIACFFIDRRKEYVAKVLGARCGYNPEVDLQTLHERSLIKVLGETVTMHD 528

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL+++G+++V+  SP+E GKR+R+W + +  +VL +  GT++VEG+ LD    E +    
Sbjct: 529 LLRDMGREVVRESSPKEPGKRTRIWNQGDAWNVLEQQKGTDVVEGLALDVRASEAK---S 585

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            SA +F++M  L LL+I  + L    + LS  L  + W   PLK+ PS+  +D    + M
Sbjct: 586 LSAGSFAEMKCLNLLQINGVHLTGSFKLLSKELMWICWLQCPLKYFPSDFTLDNLAVLDM 645

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
            YS + ELWKG K L++LK++ LSHS++LI+ P+   + +LEKLIL+GC+ L E  P L 
Sbjct: 646 QYSNLKELWKGKKILNRLKILNLSHSQHLIKTPNLHSS-SLEKLILKGCSSLVEEQPGLD 704

Query: 477 L 477
           L
Sbjct: 705 L 705


>gi|357499585|ref|XP_003620081.1| Disease resistance-like protein GS4-7 [Medicago truncatula]
 gi|355495096|gb|AES76299.1| Disease resistance-like protein GS4-7 [Medicago truncatula]
          Length = 1076

 Score =  328 bits (842), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 243/711 (34%), Positives = 376/711 (52%), Gaps = 64/711 (9%)

Query: 1   MDSRCEKLRFLMDSGSS-DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR  ++  L+D GS+  V+M+GI G GG+GKTT+AR VY+ I+ +F+   FL+ +   
Sbjct: 171 LESRILEVNSLIDVGSNGKVQMLGIYGTGGMGKTTLARAVYNSIADQFDGLCFLNEISAN 230

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ +LLS+L++L    + +V DG+ ++  RL RKKVLL++DDV ++KQLQ L
Sbjct: 231 SAKYGLEHLQEKLLSKLVELY-VKLGDVNDGVPIIKQRLHRKKVLLILDDVHELKQLQVL 289

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG GSR+I+T+RD+HLLK+HG++  Y+   L   EAL+L     FK  +     
Sbjct: 290 AGGLDWFGPGSRVIVTTRDKHLLKSHGIERAYEIPKLIKREALELLRWNTFKNNKVDSNF 349

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +    + YA GLPLALEV+GS L G+++ E +S L + E  P  +I  IL++SFD L 
Sbjct: 350 DGILYCAVTYASGLPLALEVVGSNLFGKNIVECKSALYQYERIPIKKIQAILKVSFDALD 409

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNNTLW----- 293
           E E+ +FLDIAC F G +   + + L    G      I VL+EK LI +  N  W     
Sbjct: 410 EDEQNVFLDIACCFNGYELKELEDILHAHYGNSMKYQISVLLEKSLIKI--NQFWETSYL 467

Query: 294 -MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTEST------------------ 334
            +H L++++G++IV+++S +E GK SRLW  +++ HVL ES                   
Sbjct: 468 TLHALMEQIGKEIVRQESLKEPGKCSRLWFHKDIIHVLEESKVNILIFMNGLLLSSVCSF 527

Query: 335 --------GTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLS 386
                   G+  +E I L+    E +V +        KM NL+ L + N     G +Y  
Sbjct: 528 FTNPINVYGSSKIEIIYLEFPSSEQKV-VDWKGDELKKMQNLKTLIVKNGSFSKGPKYFP 586

Query: 387 NRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIG--ELWKGIKHLDKLKVMILSHSEN 444
           + +R+L W  YP +F+PS++   K     +  S     EL   +K    ++ + L   + 
Sbjct: 587 DSIRVLEWHKYPSRFVPSDIFPKKRSVCKLQESDFSSYELCGTMKMFVNMRELNLDKCQF 646

Query: 445 LIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSL 504
           L R+ D +  PNLE    +GC  L EIH S    NKL ILN   C+ L+  P    MKS+
Sbjct: 647 LTRIHDVSNLPNLEIFSFQGCKNLIEIHRSFGFLNKLEILNATGCSKLMRFPP---MKSM 703

Query: 505 EKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIE 564
                            L  L +S     + FPEI+  +++++ + L  T+I  LP+S +
Sbjct: 704 S----------------LRELMLSYCESLKTFPEILGEVKNITYITLTDTSIEKLPVSFQ 747

Query: 565 LLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC--SKL-KKFPEIVRSMKDLSELF 621
            L+GL  L +K  + +  LP ++  +  L  +  +GC  SKL  KF  +V +  +  +L 
Sbjct: 748 NLTGLSNLKIKG-KGMLRLPSSIFRMPNLSDITANGCILSKLDDKFSSMVFTCPNDIKLK 806

Query: 622 LDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC 672
               S + +P  +     +E+L+LS   +   LP  I   + L  L L  C
Sbjct: 807 KCNLSDEFLPILVMWSANVEILDLSG-NSFTILPECIKDCRFLSKLTLDDC 856



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 143/321 (44%), Gaps = 63/321 (19%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
           +R L L  C  L +  + V ++ +L      G  ++ E+  S   L KLE+LN + C  L
Sbjct: 636 MRELNLDKCQFLTRIHD-VSNLPNLEIFSFQGCKNLIEIHRSFGFLNKLEILNATGCSKL 694

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP------HSTSWY 705
           +R P   +   SL+ L LS C  L+  PE LG+++++  + ++ T++        + +  
Sbjct: 695 MRFPP--MKSMSLRELMLSYCESLKTFPEILGEVKNITYITLTDTSIEKLPVSFQNLTGL 752

Query: 706 SYIPIN----LMRKSVALKLPSLSGL----CSLRKLN---------------LTDCNLME 742
           S + I     L   S   ++P+LS +    C L KL+               L  CNL +
Sbjct: 753 SNLKIKGKGMLRLPSSIFRMPNLSDITANGCILSKLDDKFSSMVFTCPNDIKLKKCNLSD 812

Query: 743 GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
             LP  +    +++ L LS NSF  LP  I     L  + L+DCK L+ +  +PPN++ +
Sbjct: 813 EFLPILVMWSANVEILDLSGNSFTILPECIKDCRFLSKLTLDDCKCLREIRGIPPNLKYL 872

Query: 803 RVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSV 862
               C SL +       CK+                      +L + L    +T+   S 
Sbjct: 873 SAKCCKSLTSS------CKN---------------------MLLNQELHEAGDTKFCFSG 905

Query: 863 VVPGSEIPEWFMYQNEGSSIT 883
               ++IPEWF +QN G++I+
Sbjct: 906 F---AKIPEWFEHQNMGNTIS 923


>gi|225460020|ref|XP_002269704.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1156

 Score =  328 bits (842), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 265/731 (36%), Positives = 406/731 (55%), Gaps = 44/731 (6%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS-KGG 64
           E+L+ L+     DVRM+GI G+GG+GKTTIA++VY+ I  +F  + FL+ V+  S     
Sbjct: 200 EELKSLLKMQLDDVRMVGIYGIGGIGKTTIAKMVYNDILCQFNGASFLEGVKNRSKCYND 259

Query: 65  LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNRE 124
            + L ++LL  +++     + ++ DG++M+  RL  KKVL+V DDV D+ Q++ +  N +
Sbjct: 260 QLQLLQELLHGIMEGGHLKLESINDGMNMIKGRLGSKKVLVVFDDVDDLDQVRGIVANYK 319

Query: 125 WFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSA 184
           WFG GSRIIIT+RD+HLL  + V   Y+   L Y++A++LF+  AFK     ++ V++S 
Sbjct: 320 WFGGGSRIIITTRDKHLLDQYEVHASYEAKVLCYEDAIELFSWHAFKVQNIREDYVEMSN 379

Query: 185 RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKK 244
            +I+YA GLPLALEVLGS L  ++ DEW+S +E+L+  P  +I D+L+IS DGL   +++
Sbjct: 380 SMIKYAQGLPLALEVLGSSLYNKTKDEWKSAIEKLKKNPNKKINDVLKISLDGLDRTQRE 439

Query: 245 IFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQ 304
           IFL IACFFKG  +D++   L+    H    I VL ++CLIT+  N + MHDL+Q++G  
Sbjct: 440 IFLHIACFFKGEAKDFILRILDD---HAEYDIGVLCDRCLITISYNKVEMHDLIQQMGWT 496

Query: 305 IVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSK 364
           I + +  ++  K  RLW  +++    +   G E VE I  D      E+ +  + K    
Sbjct: 497 IDREKHLKDPSKWIRLWDPDDISKAFSAQEGMEQVEVISYD-LSRSKEMQILGNLKIIDL 555

Query: 365 MTNLRLLKICNLQLPNGLEYLS----NRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
             +  L K+  L     LE L+     RL+         KF      M +   +++  S 
Sbjct: 556 SRSRLLTKMPELSSMPNLEELNLVCCERLK---------KFPEIRENMGRLERVHLDCSG 606

Query: 421 IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR-----LYEIHPSL 475
           I E+   I++L  L+ + L +  N  + PD  G  NL  L +    R     L EIH   
Sbjct: 607 IQEIPSSIEYLPALEFLTLHYCRNFDKFPDNFG--NLRHLRVINANRTDIKELPEIHNMG 664

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKL-------NLKSLPTTISGLKCLSTLDVS 528
            L  KL ++     T++  LP  I   +  +        NL+SLP +I GLK L  L+++
Sbjct: 665 SL-TKLFLIE----TAIKELPRSIGHLTELEELNLENCKNLRSLPNSICGLKSLGVLNLN 719

Query: 529 GDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS 588
           G      FPEI+E ME L EL L  T I  LP SIE L GL  L LKNC +L  LP ++ 
Sbjct: 720 GCSNLVAFPEIMEDMEDLRELLLSKTPITELPPSIEHLKGLEHLELKNCENLVTLPDSIG 779

Query: 589 NLKCLRSLKLSGCSKLKKFPEIVRSMKD-LSELFLDGTSIKE--VPSSIELLTKLELLNL 645
           NL  LRSL +  CSKL   P+ +RS++  L  L L G ++ +  +PS +  L+ L  L++
Sbjct: 780 NLTHLRSLCVRNCSKLHNLPDNLRSLQWCLRRLDLAGCNLMKGAIPSDLWCLSLLRFLDV 839

Query: 646 SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS--GTAVPHSTS 703
           S+   +  +P++II L +L+TL ++ C  LE +PE   ++E LE       GT    S+ 
Sbjct: 840 SEIP-IPCIPTNIIQLSNLRTLRMNHCQMLEEIPELPSRLEILEAQGCPHLGTLSTPSSP 898

Query: 704 WYSYIPINLMR 714
            +SY+ +NL +
Sbjct: 899 LWSYL-LNLFK 908



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 166/490 (33%), Positives = 240/490 (48%), Gaps = 66/490 (13%)

Query: 426 KGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILN 485
           K ++ L  LK++ LS S  L +MP+ +  PNLE+L L  C RL +  P +  +   +   
Sbjct: 542 KEMQILGNLKIIDLSRSRLLTKMPELSSMPNLEELNLVCCERLKKF-PEIRENMGRLERV 600

Query: 486 MKDCTSLITLPGKI-LMKSLEKL------NLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
             DC+ +  +P  I  + +LE L      N    P     L+ L  ++ +     +E PE
Sbjct: 601 HLDCSGIQEIPSSIEYLPALEFLTLHYCRNFDKFPDNFGNLRHLRVIN-ANRTDIKELPE 659

Query: 539 IVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKL 598
           I  +M  L++L L  TAI+ LP SI  L+ L  LNL+NC++L  LP ++  LK L  L L
Sbjct: 660 I-HNMGSLTKLFLIETAIKELPRSIGHLTELEELNLENCKNLRSLPNSICGLKSLGVLNL 718

Query: 599 SGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSI 658
           +GCS L  FPEI+  M+DL EL L  T I E+P SIE L  LE L L +C+NLV LP SI
Sbjct: 719 NGCSNLVAFPEIMEDMEDLRELLLSKTPITELPPSIEHLKGLEHLELKNCENLVTLPDSI 778

Query: 659 IALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVA 718
             L  L++L +  C KL N+P+ L                  S  W              
Sbjct: 779 GNLTHLRSLCVRNCSKLHNLPDNL-----------------RSLQW-------------- 807

Query: 719 LKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
                      LR+L+L  CNLM+GA+PSD+  L  L+ L +S+     +PT+I  LS L
Sbjct: 808 ----------CLRRLDLAGCNLMKGAIPSDLWCLSLLRFLDVSEIPIPCIPTNIIQLSNL 857

Query: 779 LNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGN 838
             + +  C+ L+ +P+LP  +  +   GC  L TL          ST  + L S  L   
Sbjct: 858 RTLRMNHCQMLEEIPELPSRLEILEAQGCPHLGTL----------STPSSPLWSYLLNLF 907

Query: 839 KSLAFSMLREYLEAVSNTRQHL-SVVVPGS-EIPEWFMYQNEGSSITVTRPSNLYNKKKL 896
           KS   S   E +++ S    H+  VV+PGS  IP+W  + + G    +  P N Y     
Sbjct: 908 KSRTQSCEYE-IDSDSLWYFHVPKVVIPGSGGIPKWISHPSMGRQAIIELPKNRYEDNNF 966

Query: 897 VGYAICCVFH 906
           +G+A+   FH
Sbjct: 967 LGFAV--FFH 974


>gi|297791233|ref|XP_002863501.1| hypothetical protein ARALYDRAFT_916966 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309336|gb|EFH39760.1| hypothetical protein ARALYDRAFT_916966 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1064

 Score =  328 bits (842), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 254/727 (34%), Positives = 377/727 (51%), Gaps = 126/727 (17%)

Query: 106 VIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLF 165
           VID++    + + +AGNR+                +L    V+ +Y+   L+  E+ + F
Sbjct: 143 VIDELAHNDECKWIAGNRQ----------------VLVQCKVNGLYEMQKLSEYESSETF 186

Query: 166 NMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPS 225
           ++     Y  +     L++ ++RYA G+PL L VLGSF + +     +  L+ L   PP+
Sbjct: 187 SLSLPGRYDSM-----LNSELVRYASGIPLVLGVLGSFATNQCKFSEKEQLQMLRQNPPT 241

Query: 226 EILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLI 285
           EIL+  + SFDGL + EK +FLD+ACFF+G +R++V   L+GCG+   +GI  LI++ LI
Sbjct: 242 EILEAFRRSFDGLNDNEKNMFLDLACFFRGENRNHVIQILDGCGYFTDLGIYGLIDESLI 301

Query: 286 TVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD 345
               N + M ++ Q++G+ +V  +S +E GKRSRLW   E+ +VLT ++GTE VEGI LD
Sbjct: 302 DPLENKIEMSNVFQDMGRFVVCEES-KEPGKRSRLWDANEIANVLTSNSGTEAVEGIFLD 360

Query: 346 NYHHENEVYLCASAKAFSKMTNLRLLKI-CNLQ-------LPNGLEYLSNRLRLLGWRGY 397
                 E+    S   F +   LRLLK+ C +        LP GL  L + LRLL W  Y
Sbjct: 361 MSDLTCEL----SPTIFDRTYRLRLLKLHCAISENRGTICLPRGLYSLPDELRLLHWESY 416

Query: 398 PLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNL 457
           PL+ LP                         ++L+KLK +ILSHS  LI++P  + A NL
Sbjct: 417 PLRSLPR------------------------ENLEKLKKIILSHSRQLIKIPRLSKALNL 452

Query: 458 EKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTIS 517
           E + LEGCT L ++  S+   +KL+ LN+KDC+ L TLP  I ++SLE LNL       S
Sbjct: 453 EHIDLEGCTSLVKVSSSIHHLDKLVFLNLKDCSRLRTLPVMIHLESLEVLNL-------S 505

Query: 518 GLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNC 577
           G           DLK     EI +   +L EL+L GTAIR LP SIE L+ LV L+L NC
Sbjct: 506 G---------CSDLK-----EIQDFSPNLKELYLAGTAIRELPSSIEKLTRLVTLDLDNC 551

Query: 578 RSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELL 637
             L+ LP  +SNLK + +LKLSGCS LK  P       +L  ++L GT       ++E  
Sbjct: 552 NQLQKLPQGMSNLKAMVTLKLSGCSNLKSLP-------NLDAIYLRGTQHLNTEITME-- 602

Query: 638 TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA 697
                           +P S++   S+    L  C       ETL ++  + +L +   A
Sbjct: 603 ----------------VPKSLVHHSSIHQSRLDHC-------ETLDKL--IPDLCLKNAA 637

Query: 698 VPHSTSWYSYIPINLMRKS----VALKLPSL-------SGLCSLRKLNLTDCNLMEGALP 746
           +  S +   Y  I  +R+       +KL  L       S L +L  L L++  L++  LP
Sbjct: 638 IQKSLAASVYRQIAGIRQENWQWSTIKLQPLSIFHFLASRLYALVSLCLSNACLVD--LP 695

Query: 747 SDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNG 806
            +I  L S+  L L  N F  +P SI  L KL ++ L  CK L+SLP+LP ++  + V+G
Sbjct: 696 KEICGLPSVNILDLGGNGFSKIPESIKLLPKLHSLRLRHCKNLKSLPELPQSLVLLNVHG 755

Query: 807 CASLVTL 813
           C S+ ++
Sbjct: 756 CVSMKSV 762



 Score = 44.3 bits (103), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 11/105 (10%)

Query: 509 LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTA-IRGLPLSIELLS 567
           L  LP  I GL  ++ LD+ G+  F + PE ++ +  L  L L     ++ LP   EL  
Sbjct: 691 LVDLPKEICGLPSVNILDLGGN-GFSKIPESIKLLPKLHSLRLRHCKNLKSLP---ELPQ 746

Query: 568 GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVR 612
            LVLLN+  C S++ +P +   L+C      S C  L   PE++R
Sbjct: 747 SLVLLNVHGCVSMKSVPWSFERLQC----TFSNCFNLS--PEVIR 785


>gi|357513933|ref|XP_003627255.1| NBS resistance protein [Medicago truncatula]
 gi|355521277|gb|AET01731.1| NBS resistance protein [Medicago truncatula]
          Length = 1079

 Score =  328 bits (841), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 222/619 (35%), Positives = 338/619 (54%), Gaps = 44/619 (7%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS--KGGLVSLQRQLL 73
           S DVR++GI GM G+GKTTIA  V+  +  ++E+  F+ NVRE S   +   + L++ LL
Sbjct: 231 SEDVRVLGIWGMPGIGKTTIAEEVFRRLRSKYESCYFMANVREESEGCRTNSLRLRKNLL 290

Query: 74  SQLLKLADNSIWNVFDGID-MLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRI 132
           S LL+  D    ++ +G+  ++  RL R KVL+V+DDV D +QL+ L G  +W G GSRI
Sbjct: 291 STLLEEEDLKD-DMINGLPPLVKKRLSRMKVLIVLDDVKDAEQLEVLIGIVDWLGPGSRI 349

Query: 133 IITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ-ECVQLSARIIRYAG 191
           IIT+RD+ +L    +D++Y+   L+  E+ QLFN+ AF  ++ L+ E  +LS +++ Y  
Sbjct: 350 IITTRDKQVL-AGKIDDIYEVEPLDSAESFQLFNLNAFTKHEHLEMEYYELSKKMVDYTA 408

Query: 192 GLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIAC 251
           G+PL L+ L + L G+    W +    L+IE    + D+ ++ +  L   EK IFLDIAC
Sbjct: 409 GVPLVLKALANLLRGKDKAIWETQSRNLKIEQIENVHDVFRLIYTNLDYYEKIIFLDIAC 468

Query: 252 FFKGNDRDYVTNFLEGCGFHPVIGIRV--LIEKCLITV-HNNTLWMHDLLQELGQQIVQR 308
           FF G         L     H  +  ++  L +K L+T+   N + MHD++QE   +IV +
Sbjct: 469 FFDGLKLKLELINLLLKDRHYSVSTKLDRLKDKALVTISQENIVSMHDIIQETAWEIVHQ 528

Query: 309 QSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY-LCASAKAFSKMTN 367
           +S EE G RSRL   +++ H+L +  G E +  + +      +E+  L  S + F+KM+ 
Sbjct: 529 ESVEEPGSRSRLLDPDDIYHILNDDKGGESIRSMAI----RLSEIKELQLSPRVFAKMSK 584

Query: 368 LRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
           L+ L I          L LP GLE+L N LR L W  YPL+ LPS    +  + + + YS
Sbjct: 585 LKFLDIYTKESKNEGRLSLPRGLEFLPNELRYLRWEYYPLESLPSKFSAENLVRLSLPYS 644

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHN 479
           R+ +LW G+K L  L V+IL  S  L  +PDF+ A +L  L L+ C  L  +HPS+    
Sbjct: 645 RLKKLWHGVKDLVNLNVLILHSSTLLTELPDFSKATSLAVLDLQFCVGLTSVHPSVFSLK 704

Query: 480 KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI 539
            L  L++  C SL          SL+     S  + +S   C +          +EF   
Sbjct: 705 NLEKLDLSGCISLT---------SLQSNTHLSSLSYLSLYNCTA---------LKEFSVT 746

Query: 540 VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
            +HM   S L+L+GT+I+ LP SI L S L  LNL     +E LP ++ NL  LR L   
Sbjct: 747 SKHM---SVLNLDGTSIKELPSSIGLQSKLTFLNLGRTH-IESLPKSIKNLTRLRQLGFF 802

Query: 600 GCSKLKKFPEIVRSMKDLS 618
            C +LK  PE+ +S++ L+
Sbjct: 803 YCRELKTLPELPQSLEMLA 821



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 160/379 (42%), Gaps = 61/379 (16%)

Query: 602 SKLKKFPEIVRSMKDLSELFLDGTSI-KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           S+LKK    V+ + +L+ L L  +++  E+P      T L +L+L  C  L  +  S+ +
Sbjct: 644 SRLKKLWHGVKDLVNLNVLILHSSTLLTELPD-FSKATSLAVLDLQFCVGLTSVHPSVFS 702

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK 720
           LK+L+ L+LSGC  L ++               + TA              L   SV  K
Sbjct: 703 LKNLEKLDLSGCISLTSLQSNTHLSSLSYLSLYNCTA--------------LKEFSVTSK 748

Query: 721 LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLN 780
             S+        LNL   ++ E  LPS IG    L  L L +    SLP SI +L++L  
Sbjct: 749 HMSV--------LNLDGTSIKE--LPSSIGLQSKLTFLNLGRTHIESLPKSIKNLTRLRQ 798

Query: 781 IELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL---LDALKLCKSDSTMIACLDSLKLLG 837
           +    C+ L++LP+LP ++  + V GC SL  +     A +  K     +A  + LK L 
Sbjct: 799 LGFFYCRELKTLPELPQSLEMLAVVGCVSLQNVEFRSTASEQLKEKRKKVAFWNCLK-LN 857

Query: 838 NKSLAFSMLREYLEAVSNTRQHLS-------------------VVVPGSEIPEWFMYQNE 878
             SL    L   +  +S + +H+S                    + PGS+IPEW  Y   
Sbjct: 858 EPSLKAIELNAQINMISFSYRHISELDHDNRDQDHDQNLNHSMYLYPGSKIPEWLEYSTT 917

Query: 879 GSS-ITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNC--HIGHGIYG 935
               IT+   S  Y  K  +G+ +  +     +       GS    ++N     G GI  
Sbjct: 918 THDYITIDLFSAPYFSK--LGFILAFIIPTTTSE------GSTLKFEINDGEDDGEGIKV 969

Query: 936 IGFRDKFGQAGSDHLWLLY 954
              R + G   SDH++L+Y
Sbjct: 970 YLRRPRHG-IESDHVYLMY 987


>gi|82542045|gb|ABB82030.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 698

 Score =  328 bits (841), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 208/565 (36%), Positives = 315/565 (55%), Gaps = 81/565 (14%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD     +   + + + DVR++GI GM G+GKTTIA+VV++ + + FE S FL N+ E S
Sbjct: 176 MDRLAHNIFDFLSTATDDVRIVGIHGMPGIGKTTIAKVVFNQLCYGFEGSCFLSNINETS 235

Query: 61  SK-GGLVSLQRQLLSQLLKLADNSIWNVFD-GIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            +  GL  LQ+QLL  +LK  D +  N  D G  ++  RL+RK+VL+V DDV  + QL +
Sbjct: 236 KQFNGLAPLQKQLLHDILK-QDAANINCDDRGKVLIKERLRRKRVLVVADDVAHLDQLNA 294

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G R WFG GSR+IIT+RD +LL+    D+ Y+   L  DE+L+LF+  AFK  +P ++
Sbjct: 295 LMGERSWFGPGSRVIITTRDSNLLRE--ADQTYRIKELTRDESLRLFSWHAFKDTKPAED 352

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
            ++LS   + Y GGLPLALEV+G+ LSG++ D W+  +++L   P  +I   L+ISFD L
Sbjct: 353 YIELSKDAVDYCGGLPLALEVMGACLSGKNRDGWKCVIDKLRRIPNHDIQGKLRISFDAL 412

Query: 239 QELE-KKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
              E +  FLDIACFF    ++YV   L   CG++P + +  L E+ LI V   T+ MHD
Sbjct: 413 DGEELQNAFLDIACFFIDRKKEYVAKVLGARCGYNPEVDLETLRERSLIKVLGGTVTMHD 472

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL+++G+++V+  SP+E GKR+R+W +E+  +VL    GT++VEG+ LD    E +    
Sbjct: 473 LLRDMGREVVRESSPKEPGKRTRIWNQEDAWNVLDHQKGTDVVEGLALDVRASEAK---S 529

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            SA +F+KM                                  KF+           + M
Sbjct: 530 LSAGSFAKM----------------------------------KFV-----------LDM 544

Query: 417 CYSRIGELWKGIKHLD--------KLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
            YS + +LWKG K  +        +LK+  L+HS++LI+ P+   + +LEK  L+GC+ L
Sbjct: 545 QYSNLKKLWKGKKMRNTLQTPKFLRLKIFNLNHSQHLIKTPNLH-SSSLEKPKLKGCSSL 603

Query: 469 YEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVS 528
            E+H S+     L+ILN++ C                   LK LP +I  +K L  L++S
Sbjct: 604 VEVHQSIGNLKSLVILNLEGC-----------------WRLKILPKSIGNVKSLKHLNIS 646

Query: 529 GDLKFREFPEIVEHMEHLSELHLEG 553
           G  +  +  E +  ME L+EL  +G
Sbjct: 647 GCSQLEKLSERMGDMESLTELLADG 671



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 14/158 (8%)

Query: 501 MKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHL---SELH---LEGT 554
           MK +  +   +L     G K  +TL     L+ + F   + H +HL     LH   LE  
Sbjct: 538 MKFVLDMQYSNLKKLWKGKKMRNTLQTPKFLRLKIFN--LNHSQHLIKTPNLHSSSLEKP 595

Query: 555 AIRGLPLSIEL------LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
            ++G    +E+      L  LV+LNL+ C  L+ILP ++ N+K L+ L +SGCS+L+K  
Sbjct: 596 KLKGCSSLVEVHQSIGNLKSLVILNLEGCWRLKILPKSIGNVKSLKHLNISGCSQLEKLS 655

Query: 609 EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLS 646
           E +  M+ L+EL  DG   ++  SSI  L   EL  L+
Sbjct: 656 ERMGDMESLTELLADGIETEQFLSSIGQLKCFELETLA 693



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 44/71 (61%)

Query: 625 TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQ 684
           +S+ EV  SI  L  L +LNL  C  L  LP SI  +KSLK LN+SGC +LE + E +G 
Sbjct: 601 SSLVEVHQSIGNLKSLVILNLEGCWRLKILPKSIGNVKSLKHLNISGCSQLEKLSERMGD 660

Query: 685 IESLEELDISG 695
           +ESL EL   G
Sbjct: 661 MESLTELLADG 671


>gi|215261582|gb|ACJ64862.1| disease resistance protein RPP1-like protein R8 [Arabidopsis
            thaliana]
          Length = 1207

 Score =  328 bits (841), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 254/767 (33%), Positives = 386/767 (50%), Gaps = 94/767 (12%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MD   + LR  +D    +VRMIGI G  G+GKTTIAR +++ +S  F+ S  + N+R I 
Sbjct: 275  MDMLEQLLRLDLD----EVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIIVNIRGIY 330

Query: 61   SK------GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
             +         + LQ Q+LSQ++   D  I      + +   RL+ KKV LV+D+V  + 
Sbjct: 331  PRPCFDEYSAQLQLQNQMLSQMINHKDIMI----SHLGVAQERLRDKKVFLVLDEVDQLG 386

Query: 115  QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
            QL +LA    WFG GSRIIIT+ D  +LK HG++ VYK    + DEA Q+F M AF   Q
Sbjct: 387  QLDALAKETRWFGPGSRIIITTEDLGVLKAHGINHVYKVKYPSNDEAFQIFCMNAFGQKQ 446

Query: 175  PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
            P +   +++  ++  AG LPL L+VLGS L G+S  EW  TL RL+      I  I+Q S
Sbjct: 447  PHEGFDEIAREVMALAGELPLGLKVLGSALRGKSKPEWERTLPRLKTSLDGNIGSIIQFS 506

Query: 235  FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLW- 293
            +DGL + +K +FL IAC FK      V   L         G+ VL +K LI++  N+ + 
Sbjct: 507  YDGLCDEDKYLFLYIACLFKDELSTKVEEVLANKFLDVKQGLHVLAQKSLISIDENSFYG 566

Query: 294  ----MHDLLQELGQQIVQRQSPEE-LGKRSRLWKEEEVCHVLTEST-GTELVEGIVLDNY 347
                MH LL++ G++  ++Q       KR  L  E ++C VL++ T  +    GI LD Y
Sbjct: 567  DTINMHTLLRQFGRETSRKQFVYHGFTKRQLLVGERDICEVLSDDTIDSRRFIGIHLDLY 626

Query: 348  HHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYL-------SNRLRLLGWRGYPLK 400
              E E+ +  S K   ++ +   ++I     P  L+         S ++R L W  Y   
Sbjct: 627  KSEEELNI--SEKVLERVHDFHFVRIDASFQPERLQLALQDLICHSPKIRSLKWYSYQNI 684

Query: 401  FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
             LPS    +  +E++M +S++ +LW+G K L  LK M LS+SE+L  +P+ + A NLE+L
Sbjct: 685  CLPSTFNPEFLVELHMSFSKLRKLWEGTKQLRNLKWMDLSNSEDLKELPNLSTATNLEEL 744

Query: 461  ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLPT 514
             L  C+ L E+  S+     L  L ++ C+SL+ LP       LE+L      +L+ LP 
Sbjct: 745  KLRDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELPSFGNATKLEELYLENCSSLEKLPP 804

Query: 515  TISG--------LKC--------------LSTLDVSGDLKFREFPEIVEHMEHLSELHLE 552
            +I+         + C              L  LD+       E P  +    +L +L + 
Sbjct: 805  SINANNLQQLSLINCSRVVELPAIENATNLQVLDLHNCSSLLELPPSIASATNLKKLDIS 864

Query: 553  G-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIV 611
            G +++  LP SI  ++ L +L+L NC SL  LP+ + NLK   ++ L+GCS+LK FPEI 
Sbjct: 865  GCSSLVKLPSSIGDMTNLDVLDLSNCSSLVELPINI-NLKSFLAVNLAGCSQLKSFPEIS 923

Query: 612  RSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV---RLPSSIIAL-----KS 663
                  +++F D           + +++L  L +++C NLV   +LP S+  L     KS
Sbjct: 924  ------TKIFTD---------CYQRMSRLRDLRINNCNNLVSLPQLPDSLAYLYADNCKS 968

Query: 664  LK-----------TLNLSGCFKLENVPETLGQIESLEELDISGTAVP 699
            L+           +LN   CFKL      L    +     + GT VP
Sbjct: 969  LERLDCCFNNPEISLNFPKCFKLNQEARDLIMHTTCINATLPGTQVP 1015



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 178/384 (46%), Gaps = 66/384 (17%)

Query: 509  LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHL-EGTAIRGLPLSIELLS 567
            L+ L      L+ L  +D+S     +E P +     +L EL L + +++  LP SIE L+
Sbjct: 705  LRKLWEGTKQLRNLKWMDLSNSEDLKELPNL-STATNLEELKLRDCSSLVELPSSIEKLT 763

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTS 626
             L  L L+ C SL  LP +  N   L  L L  CS L+K P  + +  +L +L  ++ + 
Sbjct: 764  SLQRLYLQRCSSLVELP-SFGNATKLEELYLENCSSLEKLPPSINA-NNLQQLSLINCSR 821

Query: 627  IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIE 686
            + E+P+ IE  T L++L+L +C +L+ LP SI +  +LK L++SGC  L  +P ++G   
Sbjct: 822  VVELPA-IENATNLQVLDLHNCSSLLELPPSIASATNLKKLDISGCSSLVKLPSSIGD-- 878

Query: 687  SLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALP 746
             +  LD+                ++L   S  ++LP    L S   +NL  C+ ++    
Sbjct: 879  -MTNLDV----------------LDLSNCSSLVELPININLKSFLAVNLAGCSQLK---- 917

Query: 747  SDIGNLCSLKELYLSKNSFVSLPTSI-----THLSKLLNIELEDCKRLQSLPQLPPNIRQ 801
                             SF  + T I       +S+L ++ + +C  L SLPQLP ++  
Sbjct: 918  -----------------SFPEISTKIFTDCYQRMSRLRDLRINNCNNLVSLPQLPDSLAY 960

Query: 802  VRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLS 861
            +  + C SL  L               C ++ ++  N    F + +E  + + +T   ++
Sbjct: 961  LYADNCKSLERL-------------DCCFNNPEISLNFPKCFKLNQEARDLIMHT-TCIN 1006

Query: 862  VVVPGSEIPEWFMYQ-NEGSSITV 884
              +PG+++P  F ++   G S+ +
Sbjct: 1007 ATLPGTQVPACFNHRATSGDSLKI 1030


>gi|215261578|gb|ACJ64858.1| disease resistance protein RPP1-like protein R4 [Arabidopsis
            thaliana]
          Length = 1363

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 284/934 (30%), Positives = 439/934 (47%), Gaps = 140/934 (14%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-- 58
            M +  +K+  L+     +VRMIGI G  G+GKTTIA  ++D  S  F  +  + ++RE  
Sbjct: 360  MRAHMDKMEHLLRLDLDEVRMIGIWGTPGIGKTTIAACMFDRFSSRFPFAAIMTDIRECY 419

Query: 59   ----ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
                ++ +   + LQ Q+LSQ+    D  I      + +   RL+ KKV +V+D+V  + 
Sbjct: 420  PRLCLNERNAQLKLQDQMLSQIFNQKDIKI----SHLGVAQERLKDKKVFIVLDEVDHLG 475

Query: 115  QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
            QL +LA    WFG GSRIIIT+ D+ +LK HG++ VYK    + DEA Q+F M AF   Q
Sbjct: 476  QLDALAKETRWFGPGSRIIITTEDQGILKAHGINHVYKVEYPSNDEAFQIFCMNAFGQKQ 535

Query: 175  PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
            P +    L+  +   AG LPL L+VLGS L G S  EW  TL RL+     +I  ++Q S
Sbjct: 536  PCEGFCDLAWEVKALAGELPLGLKVLGSALRGMSKPEWERTLPRLKTSLDGKIGSVIQFS 595

Query: 235  FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
            +D L + +K +FL IAC F       V   L G       G+ VL +K LI+ +   + M
Sbjct: 596  YDALCDEDKYLFLYIACLFNDESTTKVKELL-GKFLDVRQGLHVLAQKSLISFYGERIHM 654

Query: 295  HDLLQELGQQIVQRQSPEELGKRSRLW-KEEEVCHVLTE-STGTELVEGIVLDNYHHENE 352
            H LL++ G++   +Q      ++ +L   E ++C VL + +T      GI LD Y +E E
Sbjct: 655  HTLLEQFGRETSCKQFVHHGYRKHQLLVGERDICEVLDDDTTDNRRFIGINLDLYKNEEE 714

Query: 353  VYLCASAKAFSKMTNLRLLKIC----------------------------------NLQL 378
            + +  S KA  ++ + + +KI                                   ++  
Sbjct: 715  LNI--SEKALERIHDFQFVKINLRQKLLHFVKINDKNHAQKESQRLQSLNIYHRINSIHQ 772

Query: 379  PNGLE---YLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLK 435
            P  L+   Y S R+R L W  Y    LP     +  +E+ M  S++ +LW+G K L  LK
Sbjct: 773  PERLQDLIYQSPRIRSLKWYSYQNMSLPCTFNPEFLVELDMSSSKLRKLWEGTKQLRNLK 832

Query: 436  VMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITL 495
             M LS S +L  +P+ + A NLE+L                         +++C+SL+ L
Sbjct: 833  WMDLSDSIDLKELPNLSTATNLEEL------------------------ELRNCSSLMEL 868

Query: 496  PGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHL-EGT 554
            P      S+EKL         + L+ L   D S  +K    P I  +  +L EL L   +
Sbjct: 869  PS-----SIEKL---------TSLQRLDLCDCSSLVKLP--PSI--NANNLWELSLINCS 910

Query: 555  AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK--CLRSLKLSGCSKLKKFPEIVR 612
             +  LP +IE  + L  LNL+NC SL  LP+++   +   L+ L +SGCS L K P  + 
Sbjct: 911  RVVELP-AIENATNLWELNLQNCSSLIELPLSIGTARNLFLKELNISGCSSLVKLPSSIG 969

Query: 613  SMKDLSELFLDGTS-IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSG 671
             M +L E  L   S + E+PSSI  L  L  L +  C  L  LP++I  LKSL TL+L+ 
Sbjct: 970  DMTNLEEFDLSNCSNLVELPSSIGNLQNLCELIMRGCSKLEALPTNI-NLKSLYTLDLTD 1028

Query: 672  CFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLR 731
            C +L++ PE    I    EL + GTA+                K V L + S S L   +
Sbjct: 1029 CSQLKSFPEISTNIS---ELWLKGTAI----------------KEVPLSIMSWSPLVDFQ 1069

Query: 732  KLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQS 791
                        AL    G       L+LSK+    +P  +  +S+L  + L +C  L S
Sbjct: 1070 ISYFESLKEFPHALDIITG-------LWLSKSDIQEVPPWVKRMSRLRELTLNNCNNLVS 1122

Query: 792  LPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLE 851
            LPQLP ++  +  + C SL               +  C ++ ++       F + +E  +
Sbjct: 1123 LPQLPDSLAYLYADNCKSL-------------ERLDCCFNNPEISLYFPKCFKLNQEARD 1169

Query: 852  AVSNTRQHLSVVVPGSEIPEWFMYQ-NEGSSITV 884
             + +T     V++PG+++P  F ++   G S+ +
Sbjct: 1170 LIMHTSTRQCVMLPGTQVPACFNHRATSGDSLKI 1203


>gi|15240885|ref|NP_198650.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758866|dbj|BAB09448.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332006916|gb|AED94299.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1059

 Score =  327 bits (839), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 249/731 (34%), Positives = 375/731 (51%), Gaps = 88/731 (12%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           M++  EK++ L+   S++V+MIGI G  G+GKTTIARV+Y+  S +F  S F+DN++E+ 
Sbjct: 234 MEAHMEKMKSLLSLHSNEVKMIGIWGPSGIGKTTIARVLYNRFSGDFGLSVFMDNIKELM 293

Query: 60  -------SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVD 112
                        + LQ QL+S++    +  I +    + ++  RL+  KVL+V+D +  
Sbjct: 294 HTRPVGSDDYSAKLHLQNQLMSEITNHKETKITH----LGVVPDRLKDNKVLIVLDSIDQ 349

Query: 113 VKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKT 172
             QL ++A   +WFG GSRIIIT++D+ LL+ H ++ +YK    +  EA Q+F   AF  
Sbjct: 350 SIQLDAIAKETQWFGPGSRIIITTQDQKLLEAHDINNIYKVEFPSKYEAFQIFCTYAFGQ 409

Query: 173 YQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQ 232
             P     +L+  +    G LPL L V+GS     S D+W   L RL+    + I  IL+
Sbjct: 410 NFPKDGFEKLAWEVTDLLGELPLGLRVMGSHFRRMSKDDWVIALPRLKTRLDANIQSILK 469

Query: 233 ISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLIT---VHN 289
            S+D L   +K +FL IAC F   +   V ++L         G+ +L EK LI    V+ 
Sbjct: 470 FSYDALSPEDKDLFLHIACLFNNEEIVKVEDYLALDFLDARHGLHLLAEKSLIDLEGVNY 529

Query: 290 NTLWMHDLLQELGQQIVQ----RQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIV-- 343
             L MH+LL++LG++IV+      S  E  KR  L   +++C VL + TG++ ++GI   
Sbjct: 530 KVLKMHNLLEQLGKEIVRYHPAHHSIREPEKRQFLVDTKDICEVLADGTGSKSIKGICFD 589

Query: 344 LDNYHHENEVYLCASAKAFSKMTNLRLLKIC-----NLQLPNGLEYLSNRLRLLGWRGYP 398
           LDN        L  S +AF  MTNL+ L++       L LP GL YL  +LRL+ W  +P
Sbjct: 590 LDNLSGR----LNISERAFEGMTNLKFLRVLRDRSEKLYLPQGLNYLPKKLRLIEWDYFP 645

Query: 399 LKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLE 458
           +K LPSN      + ++M  S++ +LW+G + L  LK M LS+S NL  +PD + A  L+
Sbjct: 646 MKSLPSNFCTTYLVNLHMRKSKLEKLWEGKQPLGNLKWMNLSNSRNLKELPDLSTATKLQ 705

Query: 459 KLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL---------NL 509
            L L  C+ L EI  S+     L  LN+  CTSL+ LP  I   SL KL          L
Sbjct: 706 DLNLTRCSSLVEIPFSIGNTTNLEKLNLVMCTSLVELPSSI--GSLHKLRELRLRGCSKL 763

Query: 510 KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGL 569
           + LPT IS L+ L  LD++     + FP+I  +++HLS   L  TAI  +P  I+  S  
Sbjct: 764 EVLPTNIS-LESLDNLDITDCSLLKSFPDISTNIKHLS---LARTAINEVPSRIKSWSR- 818

Query: 570 VLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKE 629
                                  LR   +S    LK+ P  + ++  LS    + T ++E
Sbjct: 819 -----------------------LRYFVVSYNENLKESPHALDTITMLSS---NDTKMQE 852

Query: 630 VPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLE 689
           +P  ++ +++LE L L  CKNLV LP    +L ++  +N   C             ESLE
Sbjct: 853 LPRWVKKISRLETLMLEGCKNLVTLPELPDSLSNIGVIN---C-------------ESLE 896

Query: 690 ELDISGTAVPH 700
            LD S    P+
Sbjct: 897 RLDCSFYKHPN 907



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 161/346 (46%), Gaps = 52/346 (15%)

Query: 545 HLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKL 604
           +L  LH+  + +  L    + L  L  +NL N R+L+ LP  +S    L+ L L+ CS  
Sbjct: 657 YLVNLHMRKSKLEKLWEGKQPLGNLKWMNLSNSRNLKELP-DLSTATKLQDLNLTRCS-- 713

Query: 605 KKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSL 664
                                S+ E+P SI   T LE LNL  C +LV LPSSI +L  L
Sbjct: 714 ---------------------SLVEIPFSIGNTTNLEKLNLVMCTSLVELPSSIGSLHKL 752

Query: 665 KTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVAL----K 720
           + L L GC KLE +P  +  +ESL+ LDI+  ++  S   +  I  N+   S+A     +
Sbjct: 753 RELRLRGCSKLEVLPTNIS-LESLDNLDITDCSLLKS---FPDISTNIKHLSLARTAINE 808

Query: 721 LPS-LSGLCSLRKLNLT-DCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
           +PS +     LR   ++ + NL E     D   + S  +  + +     LP  +  +S+L
Sbjct: 809 VPSRIKSWSRLRYFVVSYNENLKESPHALDTITMLSSNDTKMQE-----LPRWVKKISRL 863

Query: 779 LNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGN 838
             + LE CK L +LP+LP ++  + V  C SL  L       K  +  I  ++ LKL  N
Sbjct: 864 ETLMLEGCKNLVTLPELPDSLSNIGVINCESLERL--DCSFYKHPNMFIGFVNCLKL--N 919

Query: 839 KSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
           K       RE ++  S+T      ++PG  +P  F Y+  G S+ V
Sbjct: 920 KE-----ARELIQTSSST----CSILPGRRVPSNFTYRKTGGSVLV 956



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 132/272 (48%), Gaps = 49/272 (18%)

Query: 548 ELHLEGT---AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL-----KLS 599
           E+  +GT   +I+G+   ++ LSG   LN+   R+ E     ++NLK LR L     KL 
Sbjct: 572 EVLADGTGSKSIKGICFDLDNLSGR--LNISE-RAFE----GMTNLKFLRVLRDRSEKLY 624

Query: 600 GCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSII 659
               L   P+ +R ++       D   +K +PS+    T L  L++   K L +L     
Sbjct: 625 LPQGLNYLPKKLRLIE------WDYFPMKSLPSNF-CTTYLVNLHMRKSK-LEKLWEGKQ 676

Query: 660 ALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVAL 719
            L +LK +NLS    L+ +P+ L     L++L                   NL R S  +
Sbjct: 677 PLGNLKWMNLSNSRNLKELPD-LSTATKLQDL-------------------NLTRCSSLV 716

Query: 720 KLP-SLSGLCSLRKLNLTDC-NLMEGALPSDIGNLCSLKELYLSKNSFVS-LPTSITHLS 776
           ++P S+    +L KLNL  C +L+E  LPS IG+L  L+EL L   S +  LPT+I+ L 
Sbjct: 717 EIPFSIGNTTNLEKLNLVMCTSLVE--LPSSIGSLHKLRELRLRGCSKLEVLPTNIS-LE 773

Query: 777 KLLNIELEDCKRLQSLPQLPPNIRQVRVNGCA 808
            L N+++ DC  L+S P +  NI+ + +   A
Sbjct: 774 SLDNLDITDCSLLKSFPDISTNIKHLSLARTA 805


>gi|240256011|ref|NP_193686.5| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658792|gb|AEE84192.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1210

 Score =  327 bits (839), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 286/935 (30%), Positives = 455/935 (48%), Gaps = 147/935 (15%)

Query: 1    MDSRCEKL-RFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            ++SR ++L + LM      VR++G+ GM G+GKTT+A +VY      F+   FL+++ + 
Sbjct: 235  IESRSKELEKLLMFDNDECVRVVGVLGMTGIGKTTVADIVYKQNFQRFDGYEFLEDIEDN 294

Query: 60   SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            S + GL  L ++LL +LL   +  +           + L+ KK+ +V+D+V + KQ++ L
Sbjct: 295  SKRYGLPYLYQKLLHKLLDGENVDV----RAQGRPENFLRNKKLFIVLDNVTEEKQIEYL 350

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
             G +  +  GSRI+I +RD+ LL+ +  D  Y    LN  EA++LF ++ F  + P +E 
Sbjct: 351  IGKKNVYRQGSRIVIITRDKKLLQKNA-DATYVVPRLNDREAMELFCLQVFGNHYPTEEF 409

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            V LS   + YA GLPLAL++LG  L    ++ W+  LE L++ P  E+   L+ S+  L 
Sbjct: 410  VDLSNDFVCYAKGLPLALKLLGKGLLTHDINYWKKKLEFLQVNPDKELQKELKSSYKALD 469

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
            + +K +FLDIACFF+                                     + MHDLL 
Sbjct: 470  DDQKSVFLDIACFFR-------------------------------------IEMHDLLH 492

Query: 300  ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
             +G++I + +S  + G+R RLW  +++  +L  +TGTE V GI L N      + L  +A
Sbjct: 493  AMGKEIGKEKSIRKAGERRRLWNHKDIRDILEHNTGTECVRGIFL-NMSEVRRIKLFPAA 551

Query: 360  KAFSKMTNLRLLKI--------CN----LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
              F+ ++ L+ LK         C+     Q     ++  + L  L W+GYP   LPS+  
Sbjct: 552  --FTMLSKLKFLKFHSSHCSQWCDNDHIFQCSKVPDHFPDELVYLHWQGYPYDCLPSDFD 609

Query: 408  MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
              + +++ + YS I +LW+  K+ + L+ + L  S++L+ +   + A NLE+L LEGCT 
Sbjct: 610  PKELVDLSLRYSHIKQLWEDEKNTESLRWVDLGQSKDLLNLSGLSRAKNLERLDLEGCTS 669

Query: 468  LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDV 527
            L ++  S+   N+LI LN++DCTSL +LP    +KSL+                  TL +
Sbjct: 670  L-DLLGSVKQMNELIYLNLRDCTSLESLPKGFKIKSLK------------------TLIL 710

Query: 528  SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
            SG LK ++F  I E +E    LHLEGTAI  +   IE L  L+LLNLKNC  L+ LP  +
Sbjct: 711  SGCLKLKDFHIISESIE---SLHLEGTAIERVVEHIESLHSLILLNLKNCEKLKYLPNDL 767

Query: 588  SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLN--- 644
              LK L+ L LSGCS L+  P I   M+ L  L +DGTSIK+ P  +  L+ L++ +   
Sbjct: 768  YKLKSLQELVLSGCSALESLPPIKEKMECLEILLMDGTSIKQTP-EMSCLSNLKICSFCR 826

Query: 645  --LSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHST 702
              + D   LV LP S  +   L  L L+ C  ++ +P+    + SL  L +S        
Sbjct: 827  PVIDDSTGLVVLPFSGNSF--LSDLYLTNC-NIDKLPDKFSSLRSLRCLCLS-------- 875

Query: 703  SWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK 762
                       R ++     S+  L SL  L+L  C              C LK L L  
Sbjct: 876  -----------RNNIETLPESIEKLYSLLLLDLKHC--------------CRLKSLPL-- 908

Query: 763  NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKS 822
                 LP+++ +L       LE+  +  ++P +   +    +          D  KL ++
Sbjct: 909  -----LPSNLQYLDAHGCGSLENVSKPLTIPLVTERMHTTFI--------FTDCFKLNQA 955

Query: 823  DSTMIACLDSLK--LLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGS 880
            +   I     LK  LL   S   +     L+ +      ++V  PG +IP WF +Q  GS
Sbjct: 956  EKEDIVAQAQLKSQLLARTSRHHNHKGLLLDPL------VAVCFPGHDIPSWFSHQKMGS 1009

Query: 881  SITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNN 915
             I      +  N  K +G ++C V    K+  G++
Sbjct: 1010 LIETDLLPHWCN-SKFIGASLCVVV-TFKDHEGHH 1042


>gi|215261577|gb|ACJ64857.1| disease resistance protein RPP1-like protein R3 [Arabidopsis
            thaliana]
          Length = 1193

 Score =  327 bits (839), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 285/916 (31%), Positives = 437/916 (47%), Gaps = 107/916 (11%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M +  +++  L+     +VRMIGI G  G+GKTTIAR +++ +S  F+ S  + N++   
Sbjct: 218  MRAHMDRMEHLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCY 277

Query: 61   SK------GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
             +         + LQ ++LSQ++   D  I      + +   RL+ KKV LV+D+V  + 
Sbjct: 278  PRPCFDEYSAQLQLQNEMLSQMINHKDIMI----SHLGVAQERLRDKKVFLVLDEVDQLG 333

Query: 115  QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
            QL +LA   +WFG GSRIIIT+ D  +LK HG++ VYK    + DEA Q+F M AF    
Sbjct: 334  QLDALAKEIQWFGLGSRIIITTEDLGVLKAHGINHVYKVEYPSNDEAFQIFCMNAFGQKH 393

Query: 175  PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
            P     +++  +   AG LPL L+VLGS L G S  EW  TL RL      +I +I+Q S
Sbjct: 394  PNDGFDEIAREVTYLAGELPLGLKVLGSALRGMSKPEWERTLPRLRTSLDGKIGNIIQFS 453

Query: 235  FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
            +D L + +K +FL IAC F       V   L G       G+ +L +K LI+ +  T+ M
Sbjct: 454  YDALCDEDKYLFLYIACLFNKESTTKVEGLL-GKFLDVRQGLHILAQKSLISFYGETIRM 512

Query: 295  HDLLQELGQQIVQRQSPEELGKRSRLW-KEEEVCHVLTE-STGTELVEGIVLDNYHHENE 352
            H LL++ G++   +Q      ++ +L   E ++C VL + +T      GI LD    E  
Sbjct: 513  HTLLEQFGRETSCKQFVHHGYRKHQLLVGERDICEVLDDDTTDNRRFIGINLDLREEE-- 570

Query: 353  VYLCASAKAFSKMTNLRLLKIC---------------NLQLP-NGLEYLSNRLRLLGWRG 396
              L  + K   ++ + + +KI                 +QL    L Y S R+R L W G
Sbjct: 571  --LKINEKTLERINDFQFVKINLRQKLLHFKIIRQPERVQLALEDLIYHSPRIRSLKWFG 628

Query: 397  YPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPN 456
            Y    LPS    +  +E+ M YS++ +LW+G K L  LK M LS+S +L  +P+ + A N
Sbjct: 629  YQNICLPSTFNPEFLVELDMRYSKLQKLWEGTKQLRNLKWMDLSYSIDLQELPNLSTATN 688

Query: 457  LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
            LE+L L  C+ L E                                         LP++I
Sbjct: 689  LEELKLRNCSSLVE-----------------------------------------LPSSI 707

Query: 517  SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLK 575
              L  L  LD+ G     E P    +   L +L L   +++  LP SI   + L  L+L 
Sbjct: 708  EKLTSLQRLDLQGCSSLVELPSF-GNATKLKKLDLGNCSSLVKLPPSINA-NNLQELSLI 765

Query: 576  NCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSI 634
            NC  +  LP  + N   LR LKL  CS L + P  + +  +L +L + G +S+ ++PSSI
Sbjct: 766  NCSRVVKLPA-IENATKLRELKLQNCSSLIELPLSIGTANNLWKLDISGCSSLVKLPSSI 824

Query: 635  ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
              +T LE  +LS+C NLV LPSSI  L+ L  L + GC KLE +P  +  I SL  LD++
Sbjct: 825  GDMTSLEGFDLSNCSNLVELPSSIGNLRKLTLLLMRGCSKLETLPTNINLI-SLRILDLT 883

Query: 695  G----TAVPH-STSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDI 749
                  + P  ST   S   I    K V L + S S L   +       N    AL  DI
Sbjct: 884  DCSRLKSFPEISTHIDSLYLIGTAIKEVPLSIMSWSRLAVYKMSYFESLNEFPHAL--DI 941

Query: 750  GNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCAS 809
                 + EL LSK+    +P  +  +S+L  + L +C  L SLPQL  ++  +  + C S
Sbjct: 942  -----ITELQLSKD-IQEVPPWVKRMSRLRVLRLNNCNNLVSLPQLSDSLDYIYADNCKS 995

Query: 810  LVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEI 869
            L               +  C ++ ++       F + +E  + + +T      ++PG+++
Sbjct: 996  L-------------ERLDCCFNNPEIRLYFPKCFKLNQEARDLIMHTSTVRCAMLPGTQV 1042

Query: 870  PEWFMYQ-NEGSSITV 884
            P  F ++   G S+ +
Sbjct: 1043 PACFNHRATSGDSLKI 1058


>gi|297818518|ref|XP_002877142.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322980|gb|EFH53401.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1115

 Score =  327 bits (839), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 246/738 (33%), Positives = 375/738 (50%), Gaps = 80/738 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++    ++  L+   S +VRM+GI G  G+GKT IAR +++ +S  F  S F+D    IS
Sbjct: 188 IEDHISEMSILLQLASKEVRMVGIWGSSGIGKTIIARALFNRLSRHFHGSIFIDRAF-IS 246

Query: 61  SKGGLVS------------LQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVID 108
               + S            +Q + LSQ+L   D  +++    +  +  RL+ +KVL+ ID
Sbjct: 247 KSMNIYSQANSDDYNLKLHMQGKFLSQILDKKDIKVYH----LGAMRERLKNRKVLICID 302

Query: 109 DVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMK 168
           D+ D   L +L G   WFG GSRII+ ++D+H L+ H +D +Y+    + + AL++    
Sbjct: 303 DLDDQLVLDALVGQTHWFGCGSRIIVITKDKHFLRAHKIDHIYEVRLPSEEAALEMLCRS 362

Query: 169 AFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEIL 228
            FK   P    ++L++ +   AG LPL L +L S+L GR   EW   L RL      +I 
Sbjct: 363 TFKQKYPPDGFLELASEVALRAGNLPLGLNILSSYLRGRDKKEWMDMLPRLRNGLDGKIE 422

Query: 229 DILQISFDGL-QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV 287
             L++S+DGL  + +K IF  IAC F     + +   L        IG++ L++K LI  
Sbjct: 423 KTLRVSYDGLNNKKDKAIFRHIACLFNREKINDIKLLLANSDLDVTIGLKNLVDKSLIHE 482

Query: 288 HNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNY 347
             + + MH LLQE+G++IV+ QS E  G+   L   ++ C VL ++ GT+ V GI LD  
Sbjct: 483 SYDIVEMHSLLQEMGKEIVRMQSNEP-GEHEFLVDWKDTCDVLEDNKGTKNVLGISLD-I 540

Query: 348 HHENEVYLCASAKAFSKMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPL 399
              +EV++     AF  M NL  LK             L  G ++   +LRLL W  YPL
Sbjct: 541 DEIDEVHI--HENAFKGMRNLFFLKFFTKRQKKEIRWHLSKGFDHFPPKLRLLSWEKYPL 598

Query: 400 KFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEK 459
           + +PSN   +  +++ M +S++ +LW G+  L  LK + L  S+NLI +PD + A NLEK
Sbjct: 599 RCMPSNFHPENLVKLVMRWSKLEKLWDGVHPLTGLKEINLWGSKNLIEIPDLSMATNLEK 658

Query: 460 LILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLP 513
           L+L  C+ L EI  S+   N+L   +M+ C +L  LP  I ++SL  LN      LKS P
Sbjct: 659 LVLNDCSSLMEIPSSIQYLNELYDFHMERCENLEILPTGINLQSLYDLNLMGCSRLKSFP 718

Query: 514 TTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHL---------------------- 551
              S    +STLD+ G     E P  + H+E+L  L +                      
Sbjct: 719 DISSN---ISTLDLYG-TTIEELPSNL-HLENLVNLRMCEMRSGKLWEREQPLTPLLKMV 773

Query: 552 ----------EGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
                         +  LP SI  L  L  L++ NC++LE LP  + NLK L SL LSGC
Sbjct: 774 SPSLTRIYLSNIPTLVELPSSIHNLHKLEELSIWNCKNLETLPTGI-NLKSLYSLDLSGC 832

Query: 602 SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV--RLPSSII 659
           S+L+ FP+I     ++SELFL+ T+I+EVP  IE    L  +N  +   ++    P+S+ 
Sbjct: 833 SQLRCFPDI---STNISELFLNETAIEEVPWWIENFINLSFINCGELSEVILNNSPTSVT 889

Query: 660 ALKSLKT-LNLSGCFKLE 676
               L   +    CFK++
Sbjct: 890 NNTHLPVCIKFINCFKVD 907



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 51/244 (20%)

Query: 602 SKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSI-- 658
           SKL+K  + V  +  L E+ L G+ ++ E+P  + + T LE L L+DC +L+ +PSSI  
Sbjct: 618 SKLEKLWDGVHPLTGLKEINLWGSKNLIEIPD-LSMATNLEKLVLNDCSSLMEIPSSIQY 676

Query: 659 ---------------------IALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA 697
                                I L+SL  LNL GC +L++ P+    I +   LD+ GT 
Sbjct: 677 LNELYDFHMERCENLEILPTGINLQSLYDLNLMGCSRLKSFPDISSNIST---LDLYGTT 733

Query: 698 VPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALP-SDIGNLC--S 754
           +         +P NL           L  L +LR   +    L E   P + +  +   S
Sbjct: 734 IEE-------LPSNL----------HLENLVNLRMCEMRSGKLWEREQPLTPLLKMVSPS 776

Query: 755 LKELYLSK-NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP--PNIRQVRVNGCASLV 811
           L  +YLS   + V LP+SI +L KL  + + +CK L++LP      ++  + ++GC+ L 
Sbjct: 777 LTRIYLSNIPTLVELPSSIHNLHKLEELSIWNCKNLETLPTGINLKSLYSLDLSGCSQLR 836

Query: 812 TLLD 815
              D
Sbjct: 837 CFPD 840


>gi|297809025|ref|XP_002872396.1| hypothetical protein ARALYDRAFT_489751 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318233|gb|EFH48655.1| hypothetical protein ARALYDRAFT_489751 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 918

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 249/736 (33%), Positives = 384/736 (52%), Gaps = 91/736 (12%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV-----REISSKGG------ 64
           S +VRM+GI G  G+GKTTIAR +++ +   F+   F+D        +I S+        
Sbjct: 196 SQEVRMVGIWGATGIGKTTIARALFNRLYRHFQGRVFIDRAFISKSMDIYSRANPDDYNL 255

Query: 65  LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNRE 124
            + LQ + LS+LL   +  I    + +D +  RL+  KVLL IDD+ D   L++LA   +
Sbjct: 256 KLHLQEKFLSKLLDKKNLEI----NHLDAVKERLKNMKVLLFIDDLDDQVVLEALACQTQ 311

Query: 125 WFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSA 184
           WFG GSRII+ ++D+HLL+ +G+D +Y+    + D A+++F   AF+   P    ++LS 
Sbjct: 312 WFGDGSRIIVITKDKHLLRAYGIDNIYEVLLPSKDLAIKMFCRSAFRQNSPPNGFIELSY 371

Query: 185 RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ-ELEK 243
            +++ AG LPL L +LGS+L GR+ + W   +     +   +I   L++S+DGL  + ++
Sbjct: 372 EVVQRAGSLPLGLNILGSYLRGRNKEIWMEMMPGFRNKLDGKIEKTLRVSYDGLDSKDDQ 431

Query: 244 KIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV--HNNTLWMHDLLQEL 301
            IF  IAC F       +   L   G +   G+  L++K LI +     T+ MH LLQE 
Sbjct: 432 AIFRHIACIFNFETCSDIKKLLADSGLNVTNGLINLVDKSLIRIKPKQKTVEMHCLLQET 491

Query: 302 GQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKA 361
           G++IV+ QS ++  KR  L   +++  VL + +GT+ V GI LD     +E++L     A
Sbjct: 492 GREIVRAQSVDDPRKREFLVDGKDIYDVLDDCSGTKKVLGISLD-IDEIDELHL--HVDA 548

Query: 362 FSKMTNLRLLKICN----------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           F  M NLR LK+            L LP    YL N LRLL W+ +P++ +PS       
Sbjct: 549 FKGMRNLRFLKLYTNTKISEKEDKLLLPKEFNYLPNTLRLLSWQRFPMRCMPSEFFPKYL 608

Query: 412 IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
           +++ M  S++ +LW+G+  L  LK + L  S+NL   PD + A +LE L L  C  L E+
Sbjct: 609 VKLIMTGSKLEKLWEGVMPLQCLKTINLFGSQNLKEFPDLSLATSLETLSLGYCLSLVEV 668

Query: 472 HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK---------SLPTTISGLKCL 522
             ++   NKL  LNM  C +L TLP  I +KSL  L L          +L T IS L   
Sbjct: 669 PSTIGNLNKLTYLNMLGCHNLETLPADINLKSLSHLILNGCSRLKIFPALSTNISEL--- 725

Query: 523 STLDVSGDLKFREFPEIVEHMEHLSELHLEG-------------TAIRGLPL-------- 561
            TL++   L   +FP  + H+E+L  L ++G             T+++ + L        
Sbjct: 726 -TLNL---LAVEKFPSNL-HLENLVYLIIQGMTSVKLWDGVKVLTSLKTMDLRDSKNLKE 780

Query: 562 --SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIV--RSMK-- 615
              + + S L++LNL+ C SL  LP T+ NL  L  L +SGC+ L+ FP  V  +S+K  
Sbjct: 781 IPDLSMASNLLILNLRECLSLVELPSTIRNLHNLAELDMSGCTNLETFPNDVNLQSLKRI 840

Query: 616 ----------------DLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSII 659
                           ++SEL L  T+I+EVP  IE  +KLE L +  C  L  +  +I 
Sbjct: 841 NLARCSRLKIFPDISTNISELDLSQTAIEEVPWWIENFSKLEYLLMGKCDMLEHVFLNIS 900

Query: 660 ALKSLKTLNLSGCFKL 675
            LK LK+++ S C +L
Sbjct: 901 KLKHLKSVDFSDCGRL 916



 Score = 88.2 bits (217), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 106/207 (51%), Gaps = 25/207 (12%)

Query: 402 LPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLI 461
            PSNL ++  + + +      +LW G+K L  LK M L  S+NL  +PD + A NL  L 
Sbjct: 735 FPSNLHLENLVYLIIQGMTSVKLWDGVKVLTSLKTMDLRDSKNLKEIPDLSMASNLLILN 794

Query: 462 LEGCTRLYEIHPSLL--LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGL 519
           L  C  L E+ PS +  LHN L  L+M  CT+L T P  + ++SL+++NL          
Sbjct: 795 LRECLSLVEL-PSTIRNLHN-LAELDMSGCTNLETFPNDVNLQSLKRINLA--------- 843

Query: 520 KCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRS 579
           +C          + + FP+I  +   +SEL L  TAI  +P  IE  S L  L +  C  
Sbjct: 844 RCS---------RLKIFPDISTN---ISELDLSQTAIEEVPWWIENFSKLEYLLMGKCDM 891

Query: 580 LEILPVTVSNLKCLRSLKLSGCSKLKK 606
           LE + + +S LK L+S+  S C +L K
Sbjct: 892 LEHVFLNISKLKHLKSVDFSDCGRLTK 918



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 119/277 (42%), Gaps = 75/277 (27%)

Query: 580 LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTK 639
           LE L   V  L+CL+++ L G   LK+FP       DLS                 L T 
Sbjct: 618 LEKLWEGVMPLQCLKTINLFGSQNLKEFP-------DLS-----------------LATS 653

Query: 640 LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA-- 697
           LE L+L  C +LV +PS+I  L  L  LN+ GC  LE +P  +  ++SL  L ++G +  
Sbjct: 654 LETLSLGYCLSLVEVPSTIGNLNKLTYLNMLGCHNLETLPADIN-LKSLSHLILNGCSRL 712

Query: 698 --VPHSTSWYSYIPINL------------------------------------------M 713
              P  ++  S + +NL                                          +
Sbjct: 713 KIFPALSTNISELTLNLLAVEKFPSNLHLENLVYLIIQGMTSVKLWDGVKVLTSLKTMDL 772

Query: 714 RKSVALK-LPSLSGLCSLRKLNLTDC-NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTS 771
           R S  LK +P LS   +L  LNL +C +L+E  LPS I NL +L EL +S  + +    +
Sbjct: 773 RDSKNLKEIPDLSMASNLLILNLRECLSLVE--LPSTIRNLHNLAELDMSGCTNLETFPN 830

Query: 772 ITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCA 808
             +L  L  I L  C RL+  P +  NI ++ ++  A
Sbjct: 831 DVNLQSLKRINLARCSRLKIFPDISTNISELDLSQTA 867


>gi|297800420|ref|XP_002868094.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313930|gb|EFH44353.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1247

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 263/848 (31%), Positives = 438/848 (51%), Gaps = 78/848 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++   E+++ ++   S   RM+GI G  G+GK+TI R ++  +S +F    F+       
Sbjct: 188 IEDHIEEIKSILCLESKVARMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFVTYKSTSG 247

Query: 61  SKGGL-VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
              G+ +S +++LLS++L   D ++    +   ++  RL+ KKVL+++DDV +++ L++L
Sbjct: 248 DVSGMKLSWEKELLSKILGQKDINM----EHFGVVEQRLKHKKVLILLDDVDNLEFLKTL 303

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G  EWFG GSR+I+ ++D  LLK H +D +Y+    +   AL++    AF    P  + 
Sbjct: 304 VGKTEWFGPGSRMIVITQDRQLLKAHDIDLLYEVKLPSQGLALKMLCRSAFGKDSPPDDL 363

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            +L+  + +  G LPL L +LGS L GR  DEW   + RL      +I+  L++S+D L 
Sbjct: 364 KELAVEVAKLTGNLPLGLSILGSSLKGRDKDEWMEMMPRLRNGLNGDIMKTLRVSYDRLD 423

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLL 298
           + ++ +FL IAC F G     V +  +       +G+  L++K L+ +     + MH+LL
Sbjct: 424 KEDQDMFLHIACLFNGFRVSSVDDLCKD-----NVGLTTLVDKSLMRITPKGYIEMHNLL 478

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           ++LG++I + +    L KR  L   E++  VLTE TGT+   GI L   + E  + L   
Sbjct: 479 EKLGREIDRAECNGNLRKRRFLTNFEDIEEVLTEKTGTKTAVGIRLYTDYGEKRL-LSID 537

Query: 359 AKAFSKMTNLRLLKI----CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
            K+F  M NL+ L +     N++LP GL +L  +LRLL W  +PLK LPS  +    +E+
Sbjct: 538 EKSFKGMDNLQYLSVFNCSINIKLPRGLFFLPYKLRLLEWENFPLKSLPSTFKAKYLVEL 597

Query: 415 YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
            M  S++ +LW+G + L +LK M +  S+ L  +PD + A NLEKL L GC+ L  +  S
Sbjct: 598 IMVDSKLEKLWEGTQPLGRLKKMNMCGSKYLKEIPDLSKAINLEKLDLYGCSSLVTLPSS 657

Query: 475 LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFR 534
           +    KL  LN   C+  + +  K L               +  L+ LS L+ S      
Sbjct: 658 IQNAIKLRKLN---CSGELLIDSKPL-------------EGMRNLQYLSVLNWSN----M 697

Query: 535 EFPEIVEHMEH-LSELHLEGTAIRGLP--LSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
           + P+ + H  H L  L      ++ LP     E L  L+++N K    LE L      L 
Sbjct: 698 DLPQGIVHFPHKLISLRWYEFPLKCLPSNFKAEYLVELIMVNSK----LEKLWERNQPLG 753

Query: 592 CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKN 650
            L+++ LS    LK+ P++  ++ +L E+ L G +S+  +PSSI+   KL  L++S+C+ 
Sbjct: 754 SLKTMNLSNSKYLKEIPDLSNAI-NLEEVELSGCSSLVALPSSIQNAIKLNYLDMSECRK 812

Query: 651 LVRLPSSIIALKSLKTLNLSGCFKLENVP------------ETLGQIE-----------S 687
           L   P+  + LKSL+ L+L+GC  L N P            +++ +IE            
Sbjct: 813 LESFPTH-LNLKSLEYLDLTGCLNLRNFPAIQMGNLYGFPLDSIFEIEVKDCFWNKNLPG 871

Query: 688 LEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDC-NLMEGALP 746
           L  LD     +P   S    + +++    +      +  L SL  +NL++C NL E  +P
Sbjct: 872 LNYLDCLMGCMPCKFSPEYLVSLDVRGNKLEKLWEGVQSLGSLEWMNLSECENLTE--IP 929

Query: 747 SDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRV- 804
            D+    +LK  YL+   S V+LP++I +L  LL +E++ C RL+ LP    N+  + + 
Sbjct: 930 -DLSKATNLKRFYLNGCKSLVTLPSTIENLQNLLGLEMKGCTRLEVLPT-DVNLSSLDIL 987

Query: 805 --NGCASL 810
             +GC+SL
Sbjct: 988 DLSGCSSL 995



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 122/393 (31%), Positives = 187/393 (47%), Gaps = 80/393 (20%)

Query: 355  LCASAKAFSKMTNLRLLKI---CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
            L   +K    M NL+ L +    N+ LP G+ +  ++L  L W  +PLK LPSN + +  
Sbjct: 673  LLIDSKPLEGMRNLQYLSVLNWSNMDLPQGIVHFPHKLISLRWYEFPLKCLPSNFKAEYL 732

Query: 412  IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
            +E+ M  S++ +LW+  + L  LK M LS+S+ L  +PD + A NLE++ L GC+ L  +
Sbjct: 733  VELIMVNSKLEKLWERNQPLGSLKTMNLSNSKYLKEIPDLSNAINLEEVELSGCSSLVAL 792

Query: 472  HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLPTTISG------- 518
              S+    KL  L+M +C  L + P  + +KSLE L      NL++ P    G       
Sbjct: 793  PSSIQNAIKLNYLDMSECRKLESFPTHLNLKSLEYLDLTGCLNLRNFPAIQMGNLYGFPL 852

Query: 519  ----------------------LKCL-------------STLDVSGDLKFREFPEIVEHM 543
                                  L CL              +LDV G+ K  +  E V+ +
Sbjct: 853  DSIFEIEVKDCFWNKNLPGLNYLDCLMGCMPCKFSPEYLVSLDVRGN-KLEKLWEGVQSL 911

Query: 544  -----------EHLSEL------------HLEG-TAIRGLPLSIELLSGLVLLNLKNCRS 579
                       E+L+E+            +L G  ++  LP +IE L  L+ L +K C  
Sbjct: 912  GSLEWMNLSECENLTEIPDLSKATNLKRFYLNGCKSLVTLPSTIENLQNLLGLEMKGCTR 971

Query: 580  LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTK 639
            LE+LP  V NL  L  L LSGCS L+ FP I  ++K    L+LD T+I EVP  IE  ++
Sbjct: 972  LEVLPTDV-NLSSLDILDLSGCSSLRSFPLISWNIK---WLYLDNTAIVEVPCCIENFSR 1027

Query: 640  LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC 672
            L +L +  C++L  +  +I  L SL  ++ + C
Sbjct: 1028 LTVLMMYCCQSLKNIHPNIFRLTSLMLVDFTDC 1060


>gi|297815592|ref|XP_002875679.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321517|gb|EFH51938.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1196

 Score =  327 bits (837), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 259/764 (33%), Positives = 391/764 (51%), Gaps = 54/764 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD   + LR  +D    +VRMIGI G  G+GKTTIAR + + +S  F+ S  + N++   
Sbjct: 234 MDRMEQFLRLDLD----EVRMIGIWGPPGIGKTTIARFLLNQVSDRFQLSTIMVNIKGCY 289

Query: 61  SK------GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
            +         + LQ Q+LSQL+K  D +I      + +   RL+ KKV+LV+D+V  + 
Sbjct: 290 PRPCFDEYTAQLQLQTQMLSQLIKHKDITI----SHLGVAQERLKDKKVILVLDEVDHLG 345

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL++LA   +WFG GSRIIIT+ D  +LK HG+++VYK    + DEA Q+F M AF   Q
Sbjct: 346 QLEALAKEIQWFGPGSRIIITTEDLGVLKAHGINQVYKVDFPSSDEAFQIFCMNAFGQKQ 405

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           P +    L+  +I  AG LPL L+VLGS L G S  EW   L RL+     +I  I+Q S
Sbjct: 406 PHEGFRNLAWEVIALAGELPLGLKVLGSALRGMSKPEWERALPRLKASLDGKIGSIIQFS 465

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
           +D L + +K +FL IAC F       V   L     H   G+ VL EK LI++    + M
Sbjct: 466 YDALCDEDKYLFLYIACLFNFASVHRVEEALANKFSHVRHGLHVLHEKSLISIEYERIQM 525

Query: 295 HDLLQELGQQIVQRQSPEE-LGKRSRLWKEEEVCHVLT-ESTGTELVEGIVLDNYHHENE 352
           H LLQ+ G++I ++Q     L K   L  E ++C V   +++ +    GI LD    E E
Sbjct: 526 HTLLQQFGRKISRKQFVHHGLTKHQLLVGERDICDVFDYDTSDSRRFIGINLDLSKTEEE 585

Query: 353 VYLCASAKAFSKMTNLRLLKICNLQLP---------NGLEYLSNRLRLLGWRGYPLKFLP 403
           + +  S KA  +M + + ++I    L           GL Y S ++R L WR +    LP
Sbjct: 586 LNI--SEKALERMHDFQFVRIYGDDLGQTKRLQSVLQGLIYHSQKIRSLNWRYFQDICLP 643

Query: 404 SNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
           S    +  +E+ +  S++ +LW+G K L  LK M L  S +L  +PD + A NLE++ L+
Sbjct: 644 STFNPEFLVELNLQDSKLQKLWEGTKQLKNLKWMDLGGSRDLKELPDLSTATNLEEVDLQ 703

Query: 464 GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLS 523
            C+ L E+  S+    KL  L ++DC+SL+ LP       LE+L L +         C S
Sbjct: 704 YCSSLVELPSSIGNATKLERLYLRDCSSLVELPSIGNASKLERLYLDN---------CSS 754

Query: 524 TLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRG-LPLSIELLSGLVLLNLKNCRSLEI 582
            + +   +      E +E+   L EL+L   +    LP SI   + L  L +  C SL  
Sbjct: 755 LVKLPSSINASNLQEFIENASKLWELNLLNCSSLLELPPSIGTATNLKELYISGCSSLVK 814

Query: 583 LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEV-PSSIELLTKLE 641
           LP ++ ++  L+   LS CS L + P  +  ++ LS+L + G S  EV P++I+ L  L 
Sbjct: 815 LPSSIGDMTKLKKFDLSNCSSLVEVPSAIGKLQKLSKLKMYGCSKLEVLPTNID-LESLR 873

Query: 642 LLNLSDCKNLVRLP--SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG---- 695
            L+L +C  L R P  S+ IA      L L+G   ++ VP ++     L +  IS     
Sbjct: 874 TLDLRNCSQLKRFPEISTNIAY-----LRLTGT-AIKEVPLSIMSWSRLYDFGISYFESL 927

Query: 696 TAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCN 739
              PH+    + + +N   + VA   P + G+  LR L L +CN
Sbjct: 928 KEFPHALDIITQLQLNEDIQEVA---PWVKGMSRLRVLRLYNCN 968



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 131/565 (23%), Positives = 238/565 (42%), Gaps = 76/565 (13%)

Query: 503  SLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPL 561
            +L+   L+ L      LK L  +D+ G    +E P++     +L E+ L+  +++  LP 
Sbjct: 655  NLQDSKLQKLWEGTKQLKNLKWMDLGGSRDLKELPDL-STATNLEEVDLQYCSSLVELPS 713

Query: 562  SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
            SI   + L  L L++C SL  LP ++ N   L  L L  CS L K P  + +  +L E  
Sbjct: 714  SIGNATKLERLYLRDCSSLVELP-SIGNASKLERLYLDNCSSLVKLPSSINA-SNLQEFI 771

Query: 622  LDGTSI-----------KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLS 670
             + + +            E+P SI   T L+ L +S C +LV+LPSSI  +  LK  +LS
Sbjct: 772  ENASKLWELNLLNCSSLLELPPSIGTATNLKELYISGCSSLVKLPSSIGDMTKLKKFDLS 831

Query: 671  GCFKLENVPETLGQIESLEELDISGTA----VPHSTSWYSYIPINLMRKSVALKLPSLSG 726
             C  L  VP  +G+++ L +L + G +    +P +    S   ++L   S   + P +S 
Sbjct: 832  NCSSLVEVPSAIGKLQKLSKLKMYGCSKLEVLPTNIDLESLRTLDLRNCSQLKRFPEIST 891

Query: 727  LCSLRKLNLTDC-----NLMEGALPSDIG--NLCSLKELYLSKNSFVSLPTS-------- 771
              +  +L  T       ++M  +   D G     SLKE   + +    L  +        
Sbjct: 892  NIAYLRLTGTAIKEVPLSIMSWSRLYDFGISYFESLKEFPHALDIITQLQLNEDIQEVAP 951

Query: 772  -ITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACL 830
             +  +S+L  + L +C  L SLPQ   ++  +  + C SL  L         D T     
Sbjct: 952  WVKGMSRLRVLRLYNCNNLVSLPQFSDSLAYIDADNCQSLERL---------DCTFNNPD 1002

Query: 831  DSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNL 890
              LK        F++ +E  + + +T      ++PG+++P  F ++     + V    N 
Sbjct: 1003 IHLKF----PKCFNLNQEARDLIMHTSTSEYAILPGTQVPACFNHRATAGGL-VEFKLNE 1057

Query: 891  YNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDK-----FGQA 945
                + + +  C +F  +    G+     + +  +   I     G+  R K       + 
Sbjct: 1058 SPLPRALRFKACFMFVKVNEETGD----GWSSINVYHDIMDNQNGLNVRRKPRKCYIDRV 1113

Query: 946  GSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDE 1005
             ++H+++  +  +      L  E   E  +SN        W     +++ CGL  +   +
Sbjct: 1114 LTEHIYIFEVRAEKVTSTELFFEVKTEN-DSN--------W-----KIRECGLFQILEQK 1159

Query: 1006 VEELD---QTTNQPSRFTVYNLNEF 1027
             ++     +TTN+  +F+ Y+LN F
Sbjct: 1160 FKKFTFPIKTTNK-QQFSGYDLNAF 1183



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 151/304 (49%), Gaps = 37/304 (12%)

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           E L EL+L+ + ++ L    + L  L  ++L   R L+ LP  +S    L  + L  CS 
Sbjct: 649 EFLVELNLQDSKLQKLWEGTKQLKNLKWMDLGGSRDLKELP-DLSTATNLEEVDLQYCSS 707

Query: 604 LKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
           L + P  + +   L  L+L D +S+ E+PS I   +KLE L L +C +LV+LPSSI A  
Sbjct: 708 LVELPSSIGNATKLERLYLRDCSSLVELPS-IGNASKLERLYLDNCSSLVKLPSSINASN 766

Query: 663 SLKTL-NLSGCFKLE--------NVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLM 713
             + + N S  ++L          +P ++G   +L+EL ISG                  
Sbjct: 767 LQEFIENASKLWELNLLNCSSLLELPPSIGTATNLKELYISGC----------------- 809

Query: 714 RKSVALKLPSLSG-LCSLRKLNLTDCN-LMEGALPSDIGNLCSLKELYLSKNSFVS-LPT 770
             S  +KLPS  G +  L+K +L++C+ L+E  +PS IG L  L +L +   S +  LPT
Sbjct: 810 --SSLVKLPSSIGDMTKLKKFDLSNCSSLVE--VPSAIGKLQKLSKLKMYGCSKLEVLPT 865

Query: 771 SITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACL 830
           +I  L  L  ++L +C +L+  P++  NI  +R+ G A     L  +   +     I+  
Sbjct: 866 NID-LESLRTLDLRNCSQLKRFPEISTNIAYLRLTGTAIKEVPLSIMSWSRLYDFGISYF 924

Query: 831 DSLK 834
           +SLK
Sbjct: 925 ESLK 928


>gi|6967115|emb|CAB72469.1| disease resistance protein homlog [Arabidopsis thaliana]
          Length = 1199

 Score =  327 bits (837), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 256/767 (33%), Positives = 388/767 (50%), Gaps = 94/767 (12%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MD   + LR  +D    +VRMIGI G  G+GKTTIAR +++ +S  F+ S  + N+R I 
Sbjct: 275  MDMLEQLLRLDLD----EVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIIVNIRGIY 330

Query: 61   SK------GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
             +         + LQ Q+LSQ++   D  I      + +   RL+ KKV LV+D+V  + 
Sbjct: 331  PRPCFDEYSAQLQLQNQMLSQMINHKDIMI----SHLGVAQERLRDKKVFLVLDEVDQLG 386

Query: 115  QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
            QL +LA    WFG GSRIIIT+ D  +LK HG++ VYK    + DEA Q+F M AF   Q
Sbjct: 387  QLDALAKETRWFGPGSRIIITTEDLGVLKAHGINHVYKVKYPSNDEAFQIFCMNAFGQKQ 446

Query: 175  PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
            P +   +++  ++  AG LPL L+VLGS L G+S  EW  TL RL+      I  I+Q S
Sbjct: 447  PHEGFDEIAWEVMALAGELPLGLKVLGSALRGKSKPEWERTLPRLKTSLDGNIGSIIQFS 506

Query: 235  FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLW- 293
            +DGL + +K + L IAC F       V   L         G+ VL +K LI++  N+L+ 
Sbjct: 507  YDGLCDEDKYLLLYIACLFNYESTTKVEEVLANKFLDVKQGLHVLAQKSLISIDENSLYG 566

Query: 294  ----MHDLLQELGQQIVQRQSPEE-LGKRSRLWKEEEVCHVLTEST-GTELVEGIVLDNY 347
                MH LL++ G++  ++Q       KR  L  E ++C VL++ T  +    GI  D +
Sbjct: 567  DTINMHTLLRQFGRETSRKQFVYHGFTKRQLLVGERDICEVLSDDTIDSRRFIGITFDLF 626

Query: 348  HHENEVYLCASAKAFSKMTNLRLLKICNL----QLPNGLEYL---SNRLRLLGWRGYPLK 400
              ++  YL  S KA  +M +   ++I  L    +L   L+ L   S ++R L W  Y   
Sbjct: 627  GTQD--YLNISEKALERMNDFEFVRINALIPTERLQLALQDLICHSPKIRSLKWYSYQNI 684

Query: 401  FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
             LPS    +  +E++M +S++ +LW+G K L  LK M LS+SE+L  +P+ + A NLE+L
Sbjct: 685  CLPSTFNPEFLVELHMSFSKLRKLWEGTKQLRNLKWMDLSNSEDLKELPNLSTATNLEEL 744

Query: 461  ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLPT 514
             L  C+ L E+  S+     L  L ++ C+SL+ LP       LE+L      +L+ LP 
Sbjct: 745  KLRDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELPSFGNATKLEELYLENCSSLEKLPP 804

Query: 515  TISG--------LKC--------------LSTLDVSGDLKFREFPEIVEHMEHLSELHLE 552
            +I+         + C              L  LD+       E P  +    +L EL++ 
Sbjct: 805  SINANNLQQLSLINCSRVVELPAIENATNLQKLDLGNCSSLIELPLSIGTATNLKELNIS 864

Query: 553  G-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIV 611
            G +++  LP SI  ++ L   +L NC +L  LP+ + NLK L +L L+GCS+LK FPEI 
Sbjct: 865  GCSSLVKLPSSIGDITNLKEFDLSNCSNLVELPINI-NLKFLDTLNLAGCSQLKSFPEIS 923

Query: 612  RSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV---RLPSSIIAL-----KS 663
                  +++F D           + +++L  L +++C NLV   +LP S+  L     KS
Sbjct: 924  ------TKIFTD---------CYQRMSRLRDLRINNCNNLVSLPQLPDSLAYLYADNCKS 968

Query: 664  LK-----------TLNLSGCFKLENVPETLGQIESLEELDISGTAVP 699
            L+           +LN   CFKL      L    +     + GT VP
Sbjct: 969  LERLDCCFNNPEISLNFPKCFKLNQEARDLIMHTTCINATLPGTQVP 1015



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 179/384 (46%), Gaps = 66/384 (17%)

Query: 509  LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHL-EGTAIRGLPLSIELLS 567
            L+ L      L+ L  +D+S     +E P +     +L EL L + +++  LP SIE L+
Sbjct: 705  LRKLWEGTKQLRNLKWMDLSNSEDLKELPNL-STATNLEELKLRDCSSLVELPSSIEKLT 763

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTS 626
             L  L L+ C SL  LP +  N   L  L L  CS L+K P  + +  +L +L  ++ + 
Sbjct: 764  SLQRLYLQRCSSLVELP-SFGNATKLEELYLENCSSLEKLPPSINA-NNLQQLSLINCSR 821

Query: 627  IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIE 686
            + E+P+ IE  T L+ L+L +C +L+ LP SI    +LK LN+SGC  L  +P ++G I 
Sbjct: 822  VVELPA-IENATNLQKLDLGNCSSLIELPLSIGTATNLKELNISGCSSLVKLPSSIGDIT 880

Query: 687  SLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALP 746
            +L+E D+S      + S    +PIN+              L  L  LNL  C+ ++    
Sbjct: 881  NLKEFDLS------NCSNLVELPINI-------------NLKFLDTLNLAGCSQLK---- 917

Query: 747  SDIGNLCSLKELYLSKNSFVSLPTSI-----THLSKLLNIELEDCKRLQSLPQLPPNIRQ 801
                             SF  + T I       +S+L ++ + +C  L SLPQLP ++  
Sbjct: 918  -----------------SFPEISTKIFTDCYQRMSRLRDLRINNCNNLVSLPQLPDSLAY 960

Query: 802  VRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLS 861
            +  + C SL  L               C ++ ++  N    F + +E  + + +T   ++
Sbjct: 961  LYADNCKSLERL-------------DCCFNNPEISLNFPKCFKLNQEARDLIMHT-TCIN 1006

Query: 862  VVVPGSEIPEWFMYQ-NEGSSITV 884
              +PG+++P  F ++   G S+ +
Sbjct: 1007 ATLPGTQVPACFNHRATSGDSLKI 1030


>gi|356514859|ref|XP_003526120.1| PREDICTED: TMV resistance protein N-like, partial [Glycine max]
          Length = 1146

 Score =  327 bits (837), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 240/699 (34%), Positives = 370/699 (52%), Gaps = 70/699 (10%)

Query: 1   MDSRCEKLRFLMDSG-SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           M+S   KL  L+  G ++DVR++GI GMGG+GK+T+ R +Y+ ISH+F +  ++D+V ++
Sbjct: 204 MESHFAKLSKLICLGPANDVRVVGITGMGGIGKSTLGRALYERISHQFNSLCYIDDVSKL 263

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
               G + +Q+QLLSQ L   +  I NV DG  +   RL   K L+V+D+V   KQL   
Sbjct: 264 YQGYGTLGVQKQLLSQSLNERNLEICNVSDGTLLAWKRLSNAKALIVLDNVDQDKQLDMF 323

Query: 120 AGNR-----EWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
            G R     +  G GS +II SRD+ +LK HGVD +Y+   LN ++A +LF  KAFK+  
Sbjct: 324 TGGRVDLLRKCLGRGSIVIIISRDKQILKAHGVDVIYQVKPLNDEDAARLFCRKAFKSNY 383

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
            + +  +++   + +  G PLA+EVLGS L  + V  WRS L  L +     I+++L+IS
Sbjct: 384 IVSDFEKMTGDALLHCQGHPLAIEVLGSSLFDKDVSHWRSALASLRVNKSKNIMNVLRIS 443

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
           FD L++  K+IFLDIACFF G   + V   L+  GF+   G++VLI+K  IT     + M
Sbjct: 444 FDQLEDTHKEIFLDIACFFNGRYVEGVKEVLDFRGFNLEYGLQVLIDKSFITA-TFKIHM 502

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           HDLL +LG+ IV+ +SP +  K SRLW  ++   V++++   E VE IV+   HH     
Sbjct: 503 HDLLCDLGKCIVREKSPTKPRKWSRLWDFKDFYKVMSDNMPAENVEAIVVQMNHHHGTT- 561

Query: 355 LCASAKAFSKMTNLRLLKI------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQM 408
                   S M++L+LL++         +    L  LSN L  L W  YP K LP + + 
Sbjct: 562 --MGVDGLSTMSHLKLLQLESSIPDSKRKFSGMLVNLSNELGYLKWIFYPFKCLPPSFEP 619

Query: 409 DKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
           DK +E+ + +S I +LWKG K   K ++  +  S              LE L L+GC +L
Sbjct: 620 DKLVELILRHSNIKKLWKGRKKQKKAQMSYIGDS------------LYLETLNLQGCIQL 667

Query: 469 YEIHPSLLLHNKLIILNMKDCTSLITLP--GK------ILMKSLEKL------------- 507
            EI  S++L  +L  L++KDC  LI LP  G+      ++++  +KL             
Sbjct: 668 KEIGLSIVLSRRLSYLDLKDCKCLINLPRFGEDLILQILVLEGCQKLRHIDSSIGLLKKL 727

Query: 508 ---------NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVE--HMEHLSELHLEGTAI 556
                    NL SLP +I GL  L  L++SG  K      + E    EHL ++ ++G   
Sbjct: 728 RRLDLKNCKNLVSLPNSILGLNSLECLNLSGCSKLYNIQLLYELRDAEHLKKIDIDGA-- 785

Query: 557 RGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKD 616
              P+  +  S     + ++ +S+  L  +     C+  L LS C+ L + P+ +  +  
Sbjct: 786 ---PIHFQSTSS---YSRQHKKSVGCLMPSSPIFPCMCELDLSFCN-LVQIPDAIGIICC 838

Query: 617 LSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           L +L L G +   +P +++ L+KL  L L  CK L  LP
Sbjct: 839 LEKLDLSGNNFVTLP-NLKKLSKLFSLKLQHCKKLKSLP 876



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 154/491 (31%), Positives = 234/491 (47%), Gaps = 45/491 (9%)

Query: 545  HLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            +L  L+L+G   ++ + LSI L   L  L+LK+C+ L  LP    +L  L+ L L GC K
Sbjct: 655  YLETLNLQGCIQLKEIGLSIVLSRRLSYLDLKDCKCLINLPRFGEDL-ILQILVLEGCQK 713

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
            L+                        + SSI LL KL  L+L +CKNLV LP+SI+ L S
Sbjct: 714  LR-----------------------HIDSSIGLLKKLRRLDLKNCKNLVSLPNSILGLNS 750

Query: 664  LKTLNLSGCFKLENVP--ETLGQIESLEELDISGTAVP-HSTSWYSYIPINLMRKSVALK 720
            L+ LNLSGC KL N+     L   E L+++DI G  +   STS YS       +KSV   
Sbjct: 751  LECLNLSGCSKLYNIQLLYELRDAEHLKKIDIDGAPIHFQSTSSYS----RQHKKSVGCL 806

Query: 721  LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLN 780
            +PS      + +L+L+ CNL++  +P  IG +C L++L LS N+FV+LP ++  LSKL +
Sbjct: 807  MPSSPIFPCMCELDLSFCNLVQ--IPDAIGIICCLEKLDLSGNNFVTLP-NLKKLSKLFS 863

Query: 781  IELEDCKRLQSLPQLPPNIR-QVRVNGCASLVTLLDALKLCKSDSTMIAC--LDSLKLLG 837
            ++L+ CK+L+SLP+LP  I        C  L+ +    K  K    +  C  L       
Sbjct: 864  LKLQHCKKLKSLPELPSRIDLPTDAFDCFRLM-IPSYFKNEKIGLYIFNCPELVDRDRCT 922

Query: 838  NKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLV 897
            + +L++ +L   ++      + +  V  GSEIP WF  Q+EG+ +++   S + +    +
Sbjct: 923  DMALSWMILISQVQFKLPFNRRIQSVTTGSEIPRWFNNQHEGNCVSLD-ASPVMHDHNWI 981

Query: 898  GYAICCVFHVLKNSRGNNCFGSY--PTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYL 955
            G A C +F V   +     F     P       I    YG     +     SDH+WL ++
Sbjct: 982  GVAFCLMFVVPHETLSAMGFSDSDCPPWHFFGDIPVDFYG-DLDLELVLDKSDHMWLFFV 1040

Query: 956  SRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYMDEVEELDQTTNQ 1015
            SR T +  + PL+           +     W     EVK  G   VY ++ EE      +
Sbjct: 1041 SR-TQFSRQFPLKLKYLGRLVLKCDKRM-GWSESYAEVKKYGYRWVYKEDKEEPSNPLAR 1098

Query: 1016 PSRFTVYNLNE 1026
              +F     NE
Sbjct: 1099 KRKFGEIEENE 1109


>gi|145332743|ref|NP_001078237.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|145339123|ref|NP_190053.3| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644407|gb|AEE77928.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644408|gb|AEE77929.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1219

 Score =  326 bits (836), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 256/767 (33%), Positives = 385/767 (50%), Gaps = 94/767 (12%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MD   + LR  +D    +VRMIGI G  G+GKTTIAR +++ +S  F+ S  + N+R I 
Sbjct: 275  MDMLEQLLRLDLD----EVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIIVNIRGIY 330

Query: 61   SK------GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
             +         + LQ Q+LSQ++   D  I      + +   RL+ KKV LV+D+V  + 
Sbjct: 331  PRPCFDEYSAQLQLQNQMLSQMINHKDIMI----SHLGVAQERLRDKKVFLVLDEVDQLG 386

Query: 115  QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
            QL +LA    WFG GSRIIIT+ D  +LK HG++ VYK    + DEA Q+F M AF   Q
Sbjct: 387  QLDALAKETRWFGPGSRIIITTEDLGVLKAHGINHVYKVKYPSNDEAFQIFCMNAFGQKQ 446

Query: 175  PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
            P +   +++  ++  AG LPL L+VLGS L G+S  EW  TL RL+      I  I+Q S
Sbjct: 447  PHEGFDEIAWEVMALAGELPLGLKVLGSALRGKSKPEWERTLPRLKTSLDGNIGSIIQFS 506

Query: 235  FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLW- 293
            +DGL + +K + L IAC F       V   L         G+ VL +K LI++  N+L+ 
Sbjct: 507  YDGLCDEDKYLLLYIACLFNYESTTKVEEVLANKFLDVKQGLHVLAQKSLISIDENSLYG 566

Query: 294  ----MHDLLQELGQQIVQRQSPEE-LGKRSRLWKEEEVCHVLTEST-GTELVEGIVLDNY 347
                MH LL++ G++  ++Q       KR  L  E ++C VL++ T  +    GI  D +
Sbjct: 567  DTINMHTLLRQFGRETSRKQFVYHGFTKRQLLVGERDICEVLSDDTIDSRRFIGITFDLF 626

Query: 348  HHENEVYLCASAKAFSKMTNLRLLKICNL----QLPNGLEYL---SNRLRLLGWRGYPLK 400
              ++  YL  S KA  +M +   ++I  L    +L   L+ L   S ++R L W  Y   
Sbjct: 627  GTQD--YLNISEKALERMNDFEFVRINALIPTERLQLALQDLICHSPKIRSLKWYSYQNI 684

Query: 401  FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
             LPS    +  +E++M +S++ +LW+G K L  LK M LS+SE+L  +P+ + A NLE+L
Sbjct: 685  CLPSTFNPEFLVELHMSFSKLRKLWEGTKQLRNLKWMDLSNSEDLKELPNLSTATNLEEL 744

Query: 461  ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLPT 514
             L  C+ L E+  S+     L  L ++ C+SL+ LP       LE+L      +L+ LP 
Sbjct: 745  KLRDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELPSFGNATKLEELYLENCSSLEKLPP 804

Query: 515  TISG--------LKC--------------LSTLDVSGDLKFREFPEIVEHMEHLSELHLE 552
            +I+         + C              L  LD+       E P  +    +L EL++ 
Sbjct: 805  SINANNLQQLSLINCSRVVELPAIENATNLQKLDLGNCSSLIELPLSIGTATNLKELNIS 864

Query: 553  G-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIV 611
            G +++  LP SI  ++ L   +L NC +L  LP+ + NLK L +L L+GCS+LK FPEI 
Sbjct: 865  GCSSLVKLPSSIGDITNLKEFDLSNCSNLVELPINI-NLKFLDTLNLAGCSQLKSFPEI- 922

Query: 612  RSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV---RLPSSIIAL-----KS 663
                          S K      + +++L  L +++C NLV   +LP S+  L     KS
Sbjct: 923  --------------STKIFTDCYQRMSRLRDLRINNCNNLVSLPQLPDSLAYLYADNCKS 968

Query: 664  LK-----------TLNLSGCFKLENVPETLGQIESLEELDISGTAVP 699
            L+           +LN   CFKL      L    +     + GT VP
Sbjct: 969  LERLDCCFNNPEISLNFPKCFKLNQEARDLIMHTTCINATLPGTQVP 1015



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 179/384 (46%), Gaps = 66/384 (17%)

Query: 509  LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHL-EGTAIRGLPLSIELLS 567
            L+ L      L+ L  +D+S     +E P +     +L EL L + +++  LP SIE L+
Sbjct: 705  LRKLWEGTKQLRNLKWMDLSNSEDLKELPNL-STATNLEELKLRDCSSLVELPSSIEKLT 763

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTS 626
             L  L L+ C SL  LP +  N   L  L L  CS L+K P  + +  +L +L  ++ + 
Sbjct: 764  SLQRLYLQRCSSLVELP-SFGNATKLEELYLENCSSLEKLPPSINA-NNLQQLSLINCSR 821

Query: 627  IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIE 686
            + E+P+ IE  T L+ L+L +C +L+ LP SI    +LK LN+SGC  L  +P ++G I 
Sbjct: 822  VVELPA-IENATNLQKLDLGNCSSLIELPLSIGTATNLKELNISGCSSLVKLPSSIGDIT 880

Query: 687  SLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALP 746
            +L+E D+S      + S    +PIN+              L  L  LNL  C+ ++    
Sbjct: 881  NLKEFDLS------NCSNLVELPINI-------------NLKFLDTLNLAGCSQLK---- 917

Query: 747  SDIGNLCSLKELYLSKNSFVSLPTSI-----THLSKLLNIELEDCKRLQSLPQLPPNIRQ 801
                             SF  + T I       +S+L ++ + +C  L SLPQLP ++  
Sbjct: 918  -----------------SFPEISTKIFTDCYQRMSRLRDLRINNCNNLVSLPQLPDSLAY 960

Query: 802  VRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLS 861
            +  + C SL  L               C ++ ++  N    F + +E  + + +T   ++
Sbjct: 961  LYADNCKSLERL-------------DCCFNNPEISLNFPKCFKLNQEARDLIMHT-TCIN 1006

Query: 862  VVVPGSEIPEWFMYQ-NEGSSITV 884
              +PG+++P  F ++   G S+ +
Sbjct: 1007 ATLPGTQVPACFNHRATSGDSLKI 1030


>gi|334188321|ref|NP_001190516.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332008726|gb|AED96109.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1181

 Score =  326 bits (836), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 267/840 (31%), Positives = 430/840 (51%), Gaps = 74/840 (8%)

Query: 93   MLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYK 152
            ++  RL+ KKVL+V+DDV +++ L++L G   WFG GSRII+T++D  LLK+H +D +Y+
Sbjct: 229  VVKQRLKHKKVLIVLDDVDNLELLKTLVGQTGWFGPGSRIIVTTQDRILLKSHKIDHIYE 288

Query: 153  PHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEW 212
                +   AL++    AF    P    +QL+  +    G LPLAL ++GS L GR  +EW
Sbjct: 289  VGYPSRKLALRILCRSAFDRNSPPDGFMQLANEVTELVGNLPLALNIMGSSLKGRDKEEW 348

Query: 213  RSTLERLEIE-PPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFH 271
               +  L       EIL  L++S+D L    ++IFL IAC       +Y+ + L   G +
Sbjct: 349  IEMMPSLRNSLVDGEILKTLRVSYDRLHGNYQEIFLYIACLLNCCGVEYIISML---GDN 405

Query: 272  PVIGIRVLIEKCLITVH--NNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHV 329
             +IG+++L EK LI +   + T+ MH LLQ+LG++IV+ +S    GKR  L   E++C V
Sbjct: 406  AIIGLKILAEKSLIHISPLDKTVEMHSLLQKLGRKIVRDESFGNPGKRRFLLDAEDICDV 465

Query: 330  LTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICN----------LQLP 379
             T++TGTE V GI L+    E    L    K+F  M NL+ LK+            L LP
Sbjct: 466  FTDNTGTETVLGISLNTL--EINGTLSVDDKSFQGMHNLQFLKVFENWRRGSGEGILSLP 523

Query: 380  NGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMIL 439
             GL  L  +LRLL W  +PL+ +PSN + +  + + M YS++  LW+G + L  LK M L
Sbjct: 524  QGLNSLPRKLRLLHWYKFPLRCMPSNFKAEYLVNLEMAYSQLERLWEGTQQLGSLKKMDL 583

Query: 440  SHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI 499
            S SENL  +PD + A NLE++ L  C  L  +  S+   +KL +L M  C+++  LP  +
Sbjct: 584  SKSENLKEIPDLSYAVNLEEMDLCSCKSLVTLPSSVRNLDKLRVLRMSSCSNVEVLPTDL 643

Query: 500  LMKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG 553
             ++SL+ LN      L+S P  IS  + +S L++SG     E    +E+M  L+ L  + 
Sbjct: 644  NLESLDLLNLEDCSQLRSFP-QIS--RNISILNLSGTAIDEESSLWIENMSRLTHLRWDF 700

Query: 554  TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRS 613
              ++ LP +      LV L++ + + LE L         L ++ LS   KLK+FP + + 
Sbjct: 701  CPLKSLPSNFR-QEHLVSLHMTHSK-LEKLWEGAQPFGNLVNIDLSLSEKLKEFPNLSK- 757

Query: 614  MKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC 672
            + +L  L L G  S+  VPSSI+ L+KL  LN+  C  L  LP+  + L+SL TL+LSGC
Sbjct: 758  VTNLDTLDLYGCKSLVTVPSSIQSLSKLTELNMRRCTGLEALPTD-VNLESLHTLDLSGC 816

Query: 673  FKLENVPETLGQIESLEELDISGTAVPHSTSWY-SYIPINLMRKSVALKLPSLS-GLCSL 730
             KL   P+    IE L    +  TA+    SW   +  +  +      +L ++S  +C L
Sbjct: 817  SKLTTFPKISRNIERLL---LDDTAIEEVPSWIDDFFELTTLSMKGCKRLRNISTSICEL 873

Query: 731  RKL---NLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCK 787
            + +   N +DC  +     ++  +   ++ +  + +  ++L    + L  +  +    C+
Sbjct: 874  KCIEVANFSDCERL-----TEFDDASMVRRILRTIDDLIALYEEASFLHAIFVL----CR 924

Query: 788  RLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLR 847
            +L S+              CA +     AL      S      ++  +  N S   S+ R
Sbjct: 925  KLVSI--------------CAMVFKYPQAL------SYFFNSPEADLIFANCS---SLDR 961

Query: 848  EYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHV 907
            +  E +     H   V+PG ++P  FM Q  GSS+++    + Y+ ++ +G+  C V   
Sbjct: 962  D-AETLILESNHGCAVLPGGKVPNCFMNQACGSSVSIPLHESYYS-EEFLGFKACIVLET 1019


>gi|227438283|gb|ACP30631.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1241

 Score =  326 bits (836), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 238/690 (34%), Positives = 349/690 (50%), Gaps = 62/690 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +++R  +L   +D    +   IG+ GM G+GKTT+ +++Y+    EF    FL +VR++ 
Sbjct: 213 IENRLTQLEMKLDFECENTITIGVVGMPGIGKTTLTKMLYEKWRGEFLRCVFLHDVRKLW 272

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFD-GIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
                  + R +  + L   D+    V D   + L + L  KK L+V+D+V D  Q+++L
Sbjct: 273 KD---CKMNRDIFMRELLKDDDVKQEVSDLSPESLKALLLSKKSLVVLDNVSDKSQIETL 329

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAF--KTYQPLQ 177
            G  +W   GSRI IT+ D+ ++K   VD+ Y+   L+  ++ Q F+  AF  K   P  
Sbjct: 330 LGECDWIKRGSRIFITTSDKSVIKGV-VDDTYEVLRLSGRDSFQYFSYFAFSGKLCPPED 388

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
             + LS   + YA G PLAL++LG  LS +    W  TL  L   P   I  +LQIS++G
Sbjct: 389 NFLNLSRLFVDYAKGNPLALKILGVELSEKDETHWEETLRDLAQSPNKTIQSVLQISYNG 448

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIG---IRVLIEKCLITVHNNTLWM 294
           L +  K +FLD+ACFF+  D +YV   +E C    V     I+ L  K LI +    + M
Sbjct: 449 LGQFHKDVFLDVACFFRSGDENYVRCLVESCDTDLVDAASEIKDLASKFLINISGGRVEM 508

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           HDLL   G+++  + S        RLW  + V   L +  G   V GI LD    + ++ 
Sbjct: 509 HDLLYTFGKELGSQGS-------RRLWNHKGVVGALKKRKGAGSVRGIFLDMSELKEKLP 561

Query: 355 LCASAKAFSKMTNLRLLKI------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFL 402
           L      F++M NLR LK             C L  P GL++  + +R L W  +PLK L
Sbjct: 562 L--DRCTFTEMRNLRYLKFYSSRCHRECEADCKLNFPEGLDFPLDEVRYLFWLKFPLKKL 619

Query: 403 PSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
           P +       ++ M +S I ELW+G+K   KLK + LSHS  L  +     A +L++L L
Sbjct: 620 PKDFNPKNLTDLNMSFSEIEELWEGVKDTPKLKWVDLSHSSKLCNLTGLLNAESLQRLNL 679

Query: 463 EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI-SGLKC 521
           EGCT L E+   +     L+ LNM+ CTSL  LP          +NL S+ T I +    
Sbjct: 680 EGCTSLEELPREMERMKCLVFLNMRGCTSLRVLP---------HMNLISMKTLILTNCSS 730

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
           L T  V  D              +L  LHL+G+AI  LP ++  L  L++LNLK+C+ L 
Sbjct: 731 LQTFRVVSD--------------NLETLHLDGSAIGQLPTNMWKLQRLIVLNLKDCKMLV 776

Query: 582 ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLE 641
            LP  +  LK L+ L LSGCSKLK FP  + +MK L  L LDGTSI ++P       K+ 
Sbjct: 777 ELPECLGKLKALQELVLSGCSKLKTFPIRIENMKSLQLLLLDGTSITDMP-------KIL 829

Query: 642 LLNLSDCKNLVRLPSSIIALKSLKTLNLSG 671
            LN S  ++   L   +  + SL+ L LSG
Sbjct: 830 QLNSSKVEDWPELRRGMNGISSLQRLCLSG 859



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 141/481 (29%), Positives = 225/481 (46%), Gaps = 60/481 (12%)

Query: 542  HMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
            + E L  L+LEG T++  LP  +E +  LV LN++ C SL +LP    NL  +++L L+ 
Sbjct: 670  NAESLQRLNLEGCTSLEELPREMERMKCLVFLNMRGCTSLRVLPHM--NLISMKTLILTN 727

Query: 601  CSKLKKFPEIVRSMKD-LSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSII 659
            CS L+ F    R + D L  L LDG++I ++P+++  L +L +LNL DCK LV LP  + 
Sbjct: 728  CSSLQTF----RVVSDNLETLHLDGSAIGQLPTNMWKLQRLIVLNLKDCKMLVELPECLG 783

Query: 660  ALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVAL 719
             LK+L+ L LSGC KL+  P  +  ++SL+ L + GT++              M K + L
Sbjct: 784  KLKALQELVLSGCSKLKTFPIRIENMKSLQLLLLDGTSITD------------MPKILQL 831

Query: 720  KLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS-LPTSITHLSKL 778
                +     LR+                +  + SL+ L LS N  ++ L   I+ L  L
Sbjct: 832  NSSKVEDWPELRR---------------GMNGISSLQRLCLSGNDIITNLRIDISLLCHL 876

Query: 779  LNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKS-------------DST 825
              ++L+ CK L S+P LPPN+  +  +GC  L T+   + + K              +S 
Sbjct: 877  KLLDLKFCKNLTSIPLLPPNVEILDAHGCGKLKTVATPMAILKHMEKVHSKFIFTNCNSL 936

Query: 826  MIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVT 885
              A  +S+     K      LR Y E  ++    ++   PGSE+P WF ++  GS++ + 
Sbjct: 937  EQAAKNSITTYAQKKSQLDALRCYKEGHASEALFIT-SFPGSEVPSWFDHRMIGSTLKLK 995

Query: 886  RPSNLYNKKKLVGYAICCV--FHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFG 943
             P + +   +L    +C V  F    NS    C   +      C     I G G+ +   
Sbjct: 996  FPPH-WCDNRLSTIVLCAVVAFQNEINSFSIECTCEFKNELGTCTRFSSILGGGWIEP-R 1053

Query: 944  QAGSDHLWLLYLSRQ--TCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPV 1001
            +  SDH+++ Y S    T +    P      P E+   ++ F+   G G E+  CGL  V
Sbjct: 1054 KIDSDHVFIGYTSSSHITNHVEGSPEHQKCVPTEA---SIKFKVIDGAG-EIVNCGLSLV 1109

Query: 1002 Y 1002
            Y
Sbjct: 1110 Y 1110


>gi|297805922|ref|XP_002870845.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316681|gb|EFH47104.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 836

 Score =  326 bits (835), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 225/658 (34%), Positives = 344/658 (52%), Gaps = 68/658 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           M +  +++  L+   S +VRMIGI G  G+GKTTIARV+Y   S  FE S F++N++E+ 
Sbjct: 28  MGAHMKEMESLLCLDSDEVRMIGIWGPSGIGKTTIARVLYSQFSENFELSIFMENIKELM 87

Query: 60  -------SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVD 112
                        + LQ+Q LSQ++   D  +      + +   RL  K+VL+V+D +  
Sbjct: 88  YTRPVCSDEYSAKIQLQKQFLSQIINHKDMEL----PHLGVAQDRLNDKRVLIVLDSIDQ 143

Query: 113 VKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKT 172
             QL ++A    WFG GSRIIIT++D+ LLK HG++ +YK    +  EA Q+F M AF  
Sbjct: 144 SIQLDAIAKETRWFGHGSRIIITTQDQRLLKAHGINHIYKVEFPSAYEAYQIFCMYAFGQ 203

Query: 173 YQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQ 232
             P     +L+ ++ +  G LPL L V+GS   G S  EW + L RL+I   + I  IL+
Sbjct: 204 NFPKDGFEELAWQVTKLLGNLPLGLRVMGSHFRGMSRHEWVNALPRLKIRLDASIQSILK 263

Query: 233 ISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV----- 287
            S+D L E +K +FL IAC F   +   V ++L         G+ +L EK LI +     
Sbjct: 264 FSYDALCEEDKDLFLHIACLFNDEEMVRVEDYLASSFLDVRQGLHLLAEKSLIAIEIFST 323

Query: 288 HNNTLWMHDLLQELGQQIVQ----RQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIV 343
           ++  + MH+LL +LG+ IV+     QS  E GKR  L    ++C VLT++TG+  V GI+
Sbjct: 324 NHTRIKMHNLLVQLGRDIVRHKPGHQSIREPGKRQFLVDARDICEVLTDNTGSRNVIGIL 383

Query: 344 LDNYHHENEVYLCASAKAFSKMTNLRLLKIC--------NLQLPNGLEYLSNRLRLLGWR 395
            + Y+   E  L  S +AF  ++NL+ L+           L LP GL  L  +LRL+ W 
Sbjct: 384 FELYNLSGE--LNISERAFEGLSNLKFLRFHGPYDGEGKQLYLPQGLNNLPRKLRLIEWS 441

Query: 396 GYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAP 455
            +P+K LPSN      + I M  S++  +W+G + L  LK M L  S++L  +PD + A 
Sbjct: 442 CFPMKCLPSNFCTKYLVHIDMWNSKLQNMWQGNQVLGNLKRMDLWESKHLKELPDLSTAT 501

Query: 456 NLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI--------------LM 501
           NLEKL L GC+ L E+  SL    KL +LN++ C+ L  LP  I              L+
Sbjct: 502 NLEKLTLFGCSSLAELPSSLGNLQKLRMLNLRGCSKLEALPTNINLESLDDLDLADCLLI 561

Query: 502 KSLEKLN------------LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSEL 549
           KS  +++            +K +P+TI     L  L++S +   +EFP     ++ +++L
Sbjct: 562 KSFPEISTNIKDLMLTYTAIKEVPSTIKSWSHLRNLEMSYNDNLKEFPHA---LDIITKL 618

Query: 550 HLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP--------VTVSNLKCLRSLKLS 599
           +   T I+ +PL ++ +S L  L L+ C+ L  +P        VT  N + L  L  S
Sbjct: 619 YFNDTEIQEIPLWVKKISRLQTLVLEGCKRLVTIPQLSDSLSNVTAINCQSLERLDFS 676



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 24/266 (9%)

Query: 623 DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
           +   +KE+P  +   T LE L L  C +L  LPSS+  L+ L+ LNL GC KLE +P  +
Sbjct: 487 ESKHLKELPD-LSTATNLEKLTLFGCSSLAELPSSLGNLQKLRMLNLRGCSKLEALPTNI 545

Query: 683 GQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK-LPS-LSGLCSLRKLNLT-DCN 739
                 +        +       + I  +LM    A+K +PS +     LR L ++ + N
Sbjct: 546 NLESLDDLDLADCLLIKSFPEISTNIK-DLMLTYTAIKEVPSTIKSWSHLRNLEMSYNDN 604

Query: 740 LMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
           L E     DI     + +LY +      +P  +  +S+L  + LE CKRL ++PQL  ++
Sbjct: 605 LKEFPHALDI-----ITKLYFNDTEIQEIPLWVKKISRLQTLVLEGCKRLVTIPQLSDSL 659

Query: 800 RQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQH 859
             V    C SL  L            ++  ++  K L N++      RE+++        
Sbjct: 660 SNVTAINCQSLERL--DFSFHNHPKILLWFINCFK-LNNEA------REFIQTSCTF--- 707

Query: 860 LSVVVPGSEIPEWFMYQNEGSSITVT 885
               +PG E+P  F Y+  GSSI V 
Sbjct: 708 --AFLPGREVPANFTYRANGSSIMVN 731


>gi|297794603|ref|XP_002865186.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311021|gb|EFH41445.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1216

 Score =  325 bits (834), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 262/814 (32%), Positives = 404/814 (49%), Gaps = 76/814 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV---- 56
           ++    ++  L+   S +VRM+GI G  G+GKTTIAR +++ +S  F+ S F+D      
Sbjct: 186 IEDHIAEMSLLLQLESEEVRMVGIWGSSGIGKTTIARALFNQLSRNFQVSKFIDKAFVYK 245

Query: 57  -REISSKGG------LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDD 109
            REI S          + LQ   LS+ L++ D  I    D + +LG RLQ +KVL+++DD
Sbjct: 246 SREIYSGANPDDYNMKLHLQESFLSESLRMEDIKI----DHLGVLGERLQHQKVLIIVDD 301

Query: 110 VVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKA 169
           +     L SL G  +WFGSGSRII+ + D+H L+ H +D +Y+       +  Q+    A
Sbjct: 302 LDGQVILDSLVGQTQWFGSGSRIIVVTNDKHFLRAHRIDHIYEVTFPTEVQGFQMLCQSA 361

Query: 170 FKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILD 229
           F+     +   +L   + R+AG LPL L VLGS+L GR  + W   L RL+     +I  
Sbjct: 362 FRQNYAPEGFGKLVVDVARHAGRLPLGLNVLGSYLRGRDKEYWIDMLPRLQNGLDDKIEK 421

Query: 230 ILQISFDGLQELE-KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH 288
           IL+IS+DGL   E +  F  IAC F   +   + + L        I ++ L +K LI V 
Sbjct: 422 ILRISYDGLVSAEDQATFRHIACLFNHMEVTTIKSLLGDSDVS--IALQNLADKSLIHVR 479

Query: 289 NNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYH 348
              + MH  LQE+G++IV+ Q  ++ GK+  L    ++C+VL E  GT+ V GI   N  
Sbjct: 480 QGYVVMHRSLQEMGRKIVRTQFIDKPGKQEFLVDPNDICYVLREGIGTKKVLGISF-NTS 538

Query: 349 HENEVYLCASAKAFSKMTNLRLLKICN---------LQLPNGLEYLSNRLRLLGWRGYPL 399
             +E+++  SA  F+ M NLR L I +         L LP   +YL   L+LL W  YP+
Sbjct: 539 EIDELHIHESA--FTGMRNLRFLDIDSSKNFRKKERLHLPESFDYLPPTLKLLCWSKYPM 596

Query: 400 KFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEK 459
             +PSN + D  +++ M  S++ +LW+G+     LK M +  S+ L  +PD + A NLE 
Sbjct: 597 SGMPSNFRPDNLVKLRMRKSKLHKLWEGVVSFTCLKEMDMLGSKYLKEIPDLSMATNLET 656

Query: 460 LILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGL 519
           L    C  L E+  S+   NKL+ L+M  C +L  LP                  T   L
Sbjct: 657 LCFRNCESLVELSSSIRNLNKLLRLDMGMCKTLTILP------------------TGFNL 698

Query: 520 KCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRS 579
           K L  L++    + R FPE+     ++S+L+L GT I   P +         L+LKN  S
Sbjct: 699 KSLDHLNLGSCSELRTFPEL---STNVSDLYLFGTNIEEFPSN---------LHLKNLVS 746

Query: 580 LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLT 638
           L I      + K     +  G      F  ++     L+ L+LD   S+ E+PSS + L 
Sbjct: 747 LTI------SKKNNDGKQWEGVKPFTPFMAMLSPT--LTHLWLDSIPSLVELPSSFQNLN 798

Query: 639 KLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
           +L+ L + +C+NL  LP+ I  L SL  L+ +GC +L + PE    I  LE  + +   V
Sbjct: 799 QLKKLTIRNCRNLKTLPTGI-NLLSLDDLDFNGCQQLRSFPEISTNILRLELEETAIEEV 857

Query: 699 PHSTSWYSYIPINLMRKSVALKLPSL--SGLCSLRKLNLTDCNLMEGALPSDIGNLCSLK 756
           P     +S +   +M     LK  SL  S L  L +++ ++C  +     S   +L  + 
Sbjct: 858 PWWIEKFSNLTRLIMGDCSRLKCVSLNISKLKHLGEVSFSNCAALTRVDLSGYPSLMEMM 917

Query: 757 EL-YLSKNSFVSLPTSITHLSKLLNIELEDCKRL 789
           E+  +S+ +  SLP S  H    +++   DC  L
Sbjct: 918 EVDNISEEASSSLPDSCVH---KVDLNFMDCFNL 948



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 191/431 (44%), Gaps = 90/431 (20%)

Query: 496 PGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEI--VEHMEHLSELHLEG 553
           P  ++   + K  L  L   +    CL  +D+ G    +E P++    ++E L   + E 
Sbjct: 605 PDNLVKLRMRKSKLHKLWEGVVSFTCLKEMDMLGSKYLKEIPDLSMATNLETLCFRNCE- 663

Query: 554 TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRS 613
            ++  L  SI  L+ L+ L++  C++L ILP T  NLK L  L L  CS+L+ FPE+   
Sbjct: 664 -SLVELSSSIRNLNKLLRLDMGMCKTLTILP-TGFNLKSLDHLNLGSCSELRTFPEL--- 718

Query: 614 MKDLSELFLDGTSIKEVPSSIELLTKLEL------------------------------- 642
             ++S+L+L GT+I+E PS++ L   + L                               
Sbjct: 719 STNVSDLYLFGTNIEEFPSNLHLKNLVSLTISKKNNDGKQWEGVKPFTPFMAMLSPTLTH 778

Query: 643 LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHST 702
           L L    +LV LPSS   L  LK L +  C  L+ +P  +  + SL++LD +G     S 
Sbjct: 779 LWLDSIPSLVELPSSFQNLNQLKKLTIRNCRNLKTLPTGINLL-SLDDLDFNGCQQLRS- 836

Query: 703 SWYSYIPINLMR----KSVALKLPS-LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKE 757
             +  I  N++R    ++   ++P  +    +L +L + DC+ ++          C    
Sbjct: 837 --FPEISTNILRLELEETAIEEVPWWIEKFSNLTRLIMGDCSRLK----------C---- 880

Query: 758 LYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDAL 817
                   VSL  +I+ L  L  +   +C  L           +V ++G  SL+ +++  
Sbjct: 881 --------VSL--NISKLKHLGEVSFSNCAALT----------RVDLSGYPSLMEMMEVD 920

Query: 818 KLCKSDSTMI--ACLDSLKLLGNKSLAFSMLRE-YLEAVSNTRQHLSVVVPGSEIPEWFM 874
            + +  S+ +  +C+  + L  N    F++  E  L+  SN    +  V  G E+P +F 
Sbjct: 921 NISEEASSSLPDSCVHKVDL--NFMDCFNLDPETVLDQQSNIFNLM--VFSGEEVPSYFT 976

Query: 875 YQNEG-SSITV 884
           Y+  G SS+T+
Sbjct: 977 YRTIGISSLTI 987



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 141/317 (44%), Gaps = 33/317 (10%)

Query: 514 TTISGLKCLSTLDVSGDLKFRE-----FPEIVEHME-HLSELHLEGTAIRGLPLSIELLS 567
           +  +G++ L  LD+     FR+      PE  +++   L  L      + G+P +     
Sbjct: 548 SAFTGMRNLRFLDIDSSKNFRKKERLHLPESFDYLPPTLKLLCWSKYPMSGMPSNFRP-D 606

Query: 568 GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSI 627
            LV L ++  + L  L   V +  CL+ + + G   LK+ P++  +    +  F +  S+
Sbjct: 607 NLVKLRMRKSK-LHKLWEGVVSFTCLKEMDMLGSKYLKEIPDLSMATNLETLCFRNCESL 665

Query: 628 KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
            E+ SSI  L KL  L++  CK L  LP+    LKSL  LNL  C +L   PE    +  
Sbjct: 666 VELSSSIRNLNKLLRLDMGMCKTLTILPTGF-NLKSLDHLNLGSCSELRTFPELSTNVSD 724

Query: 688 LEELDISGTAVPHSTSWYSYIPINLMRKS---------------VALKLPSLSGLCSLRK 732
           L     +    P +    + + + + +K+               +A+  P+L+ L     
Sbjct: 725 LYLFGTNIEEFPSNLHLKNLVSLTISKKNNDGKQWEGVKPFTPFMAMLSPTLTHLWLDSI 784

Query: 733 LNLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELEDCKRLQS 791
            +L +       LPS   NL  LK+L +    +  +LPT I  LS L +++   C++L+S
Sbjct: 785 PSLVE-------LPSSFQNLNQLKKLTIRNCRNLKTLPTGINLLS-LDDLDFNGCQQLRS 836

Query: 792 LPQLPPNIRQVRVNGCA 808
            P++  NI ++ +   A
Sbjct: 837 FPEISTNILRLELEETA 853


>gi|15236505|ref|NP_192585.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|5791483|emb|CAB53527.1| putative protein [Arabidopsis thaliana]
 gi|7267486|emb|CAB77970.1| putative protein [Arabidopsis thaliana]
 gi|332657243|gb|AEE82643.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1234

 Score =  325 bits (834), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 254/771 (32%), Positives = 393/771 (50%), Gaps = 100/771 (12%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLV---------SLQ 69
           VRM+GI G  G+GKTTIAR +++ I   F+   F+D  R   SK   +         +L+
Sbjct: 202 VRMVGIWGPTGIGKTTIARALFNRIYRHFQGRVFID--RAFISKSMAIYSRANSDDYNLK 259

Query: 70  RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG 129
             L  +LL    +      + +D +  RL++ KVL+ IDD+ D   L++LA   +WFG G
Sbjct: 260 LHLQEKLLSKLLDKKNLEINHLDAVKERLRQMKVLIFIDDLDDQVVLEALACQTQWFGHG 319

Query: 130 SRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRY 189
           SRII+ ++D+HLL+ +G+D +Y+    + D A+++F   AF+   P    ++L+  +++ 
Sbjct: 320 SRIIVITKDKHLLRAYGIDHIYEVLLPSKDLAIKMFCRSAFRKDSPPNGFIELAYDVVKR 379

Query: 190 AGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL-QELEKKIFLD 248
           AG LPL L +LGS+L GRS ++W   +  L  +   +I   L++S+DGL  E ++ IF  
Sbjct: 380 AGSLPLGLNILGSYLRGRSKEDWIDMMPGLRNKLDGKIQKTLRVSYDGLASEDDQAIFRH 439

Query: 249 IACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH--NNTLWMHDLLQELGQQIV 306
           IAC F       +   LE  G +   G+  L++K LI +     T+ MH LLQE  ++I+
Sbjct: 440 IACIFNFEACSDIKKLLEDSGLNVTNGLINLVDKSLIRIEPKQKTVEMHCLLQETAREII 499

Query: 307 QRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMT 366
           + QS ++ GKR  L   +++  VL   +GT  V GI LD    E E++L     AF KM 
Sbjct: 500 RAQSFDDPGKREFLVDGKDIADVLDNCSGTRKVLGISLDMDEIE-ELHL--QVDAFKKML 556

Query: 367 NLRLLKICN----------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
           NLR LK+            L LP    YL N LRLL W+ +P++ +PS+      +++ M
Sbjct: 557 NLRFLKLYTNTNISEKEDKLLLPKEFNYLPNTLRLLSWQRFPMRCMPSDFFPKYLVKLLM 616

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             S++ +LW G+  L  LK M L  SENL   P+ + A NLE L L  C  L E+  ++ 
Sbjct: 617 PGSKLEKLWDGVMPLQCLKNMNLFGSENLKEFPNLSLATNLETLSLGFCLSLVEVPSTIG 676

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLPTTISGLK--CLSTLDVS 528
             NKL  LNM  C +L   P  + +KSL  L       LK  P   S +   CL++L V 
Sbjct: 677 NLNKLTYLNMSGCHNLEKFPADVNLKSLSDLVLNGCSRLKIFPAISSNISELCLNSLAV- 735

Query: 529 GDLKFREFPEIVEHMEHLSELHLEG-------------TAIRGLPL----------SIEL 565
                 EFP  + H+E+L  L + G             T+++ + L           + +
Sbjct: 736 -----EEFPSNL-HLENLVYLLIWGMTSVKLWDGVKVLTSLKTMHLRDSKNLKEIPDLSM 789

Query: 566 LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIV--RSMK-------- 615
            S L++LNL+ C S+  LP ++ NL  L  L +SGC+ L+ FP  +  +S+K        
Sbjct: 790 ASNLLILNLEQCISIVELPSSIRNLHNLIELDMSGCTNLETFPTGINLQSLKRINLARCS 849

Query: 616 ----------DLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLK 665
                     ++SEL L  T+I+EVP  IE  +KL+ L +  C  L  +  +I  LK LK
Sbjct: 850 RLKIFPDISTNISELDLSQTAIEEVPLWIENFSKLKYLIMGKCNMLEYVFLNISKLKHLK 909

Query: 666 TLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKS 716
           +++ S C               L + D+    VP+  S  S +PIN ++K+
Sbjct: 910 SVDFSDC-------------GILSKADMYMLQVPNEAS--SSLPINCVQKA 945


>gi|4850296|emb|CAB43052.1| RPP1-WsA-like disease resistance protein [Arabidopsis thaliana]
 gi|7267816|emb|CAB81218.1| RPP1-WsA-like disease resistance protein [Arabidopsis thaliana]
          Length = 1174

 Score =  325 bits (834), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 223/690 (32%), Positives = 361/690 (52%), Gaps = 79/690 (11%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M++   K+  L+   S  VR++GI G  G+GKTTIAR +Y+     F  S F++NVRE  
Sbjct: 187 MEAHIAKMESLLCLESQGVRIVGIWGPAGVGKTTIARALYNQYHENFNLSIFMENVRESY 246

Query: 61  SKGGL------VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
            + GL      + LQ++ LS+LL   D  + +    +  +  RL+ +KVL+++DDV +++
Sbjct: 247 GEAGLDDYGLKLHLQQRFLSKLLDQKDLRVRH----LGAIEERLKSQKVLIILDDVDNIE 302

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL++LA   +WFG+ SRI++T++++ LL +H ++ +Y+    +  EAL +F   AFK   
Sbjct: 303 QLKALAKENQWFGNKSRIVVTTQNKQLLVSHDINHMYQVAYPSKQEALTIFCQHAFKQSS 362

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           P  +   L+      AG LPLAL VLGSF+ G+  +EW  +L  L+     E+  +L++ 
Sbjct: 363 PSDDLKHLAIEFTTLAGHLPLALRVLGSFMRGKGKEEWEFSLPTLKSRLDGEVEKVLKVG 422

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNF-LEGCGFHPVIGIRVLIEKCLI-TVHNNTL 292
           +DGL + EK +FL IAC F G   +Y+    +     +   G++VL +K LI    N  +
Sbjct: 423 YDGLHDHEKDLFLHIACIFSGQHENYLKQMIIANNDTYVSFGLQVLADKSLIQKFENGRI 482

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            MH LL++LG+++V++QS  E GKR  L   +E C VL+ +TGT  V GI LD    + E
Sbjct: 483 EMHSLLRQLGKEVVRKQSIYEPGKRQFLMNAKETCGVLSNNTGTGTVLGISLDMCEIKEE 542

Query: 353 VYLCASAKAFSKMTNLRLLKI-----------CNLQLP-NGLEYLSNRLRLLGWRGYPLK 400
           +Y+  S K F +M NL  LK              LQLP  GL YL  +LRLL W  YPL+
Sbjct: 543 LYI--SEKTFEEMRNLVYLKFYMSSPIDDKMKVKLQLPEEGLSYLP-QLRLLHWDAYPLE 599

Query: 401 FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
           F PS+ + +  +E+ M +S++ +LW G++ L  L+ M L+ S NL  +P+   A  L +L
Sbjct: 600 FFPSSFRPECLVELNMSHSKLKKLWSGVQPLRNLRTMNLNSSRNLEILPNLMEATKLNRL 659

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLK 520
            L  C  L E+  S+     LI+L M  C  L  +P  I + SLE L+ +          
Sbjct: 660 DLGWCESLVELPSSIKNLQHLILLEMSCCKKLEIIPTNINLPSLEVLHFRYC-------- 711

Query: 521 CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGL--VLLNLKNCR 578
                      + + FPEI  ++  L+   L GTAI  +P S++  S +  + +     +
Sbjct: 712 ----------TRLQTFPEISTNIRLLN---LIGTAITEVPPSVKYWSKIDEICMERAKVK 758

Query: 579 SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLT 638
            L  +P  +  L CLR                            +   ++ +P  ++ L 
Sbjct: 759 RLVHVPYVLEKL-CLR----------------------------ENKELETIPRYLKYLP 789

Query: 639 KLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
           +L+++++S C N++ LP    ++ +L  +N
Sbjct: 790 RLQMIDISYCINIISLPKLPGSVSALTAVN 819



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 155/342 (45%), Gaps = 31/342 (9%)

Query: 580 LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTK 639
           LE  P +    +CL  L +S  SKLKK    V+ +++L  + L+ +   E+  ++   TK
Sbjct: 598 LEFFPSSFRP-ECLVELNMSH-SKLKKLWSGVQPLRNLRTMNLNSSRNLEILPNLMEATK 655

Query: 640 LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP 699
           L  L+L  C++LV LPSSI  L+ L  L +S C KLE +P  +  + SLE L        
Sbjct: 656 LNRLDLGWCESLVELPSSIKNLQHLILLEMSCCKKLEIIPTNIN-LPSLEVLHFR----- 709

Query: 700 HSTSWYSYIPI-------NLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGA-LPSDIGN 751
           + T   ++  I       NL+  ++    PS+     + ++ +    +     +P  +  
Sbjct: 710 YCTRLQTFPEISTNIRLLNLIGTAITEVPPSVKYWSKIDEICMERAKVKRLVHVPYVLEK 769

Query: 752 LCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLV 811
           LC L+E         ++P  + +L +L  I++  C  + SLP+LP ++  +    C SL 
Sbjct: 770 LC-LRE----NKELETIPRYLKYLPRLQMIDISYCINIISLPKLPGSVSALTAVNCESLQ 824

Query: 812 TLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPE 871
            L    +        I CL     LG ++        Y+   S    +++ V+PG  +P 
Sbjct: 825 ILHGHFRNKSIHLNFINCLK----LGQRAQEKIHRSVYIHQSS----YIADVLPGEHVPA 876

Query: 872 WFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRG 913
           +F Y++ GSSI +   SN  +  K   + +C V    K   G
Sbjct: 877 YFSYRSTGSSIMIH--SNKVDLSKFNRFKVCLVLGAGKRFEG 916


>gi|357499601|ref|XP_003620089.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495104|gb|AES76307.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1079

 Score =  325 bits (833), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 214/609 (35%), Positives = 340/609 (55%), Gaps = 45/609 (7%)

Query: 1   MDSRCEKLRFLMDSGSS-DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR  K+  LMD GS+ +V+M+GI G GG+GKTT+AR VY+ ++ +F+   FL +VR  
Sbjct: 204 IESRVLKVNSLMDFGSNGEVQMLGIYGPGGMGKTTLARAVYNSLADQFDDLCFLHDVRGN 263

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ +LLS+L+KL D  + +V++GI ++  RL +KK             L+ L
Sbjct: 264 SAKYGLEHLQGKLLSKLVKL-DIKLGDVYEGIPIIEKRLHQKK-------------LEVL 309

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG   WFG GS +IIT+RD+ LL  HG++  YK H LN  EAL+L   KA K  +     
Sbjct: 310 AGGFRWFGPGSIVIITTRDKQLLAHHGIERAYKLHKLNEKEALELLTWKALKNNKVDTNF 369

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +    + YA GLPLALEV+GS L G+++ EW+S L + E  P  +I +IL++SFD L 
Sbjct: 370 DSVLHHAVTYASGLPLALEVVGSNLFGKNIGEWKSALNQYERIPDKKIQEILKVSFDALG 429

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHN------NTL 292
           E E+ +FLDIAC FKG +   + + L    G      IRVL++K L+ +        + +
Sbjct: 430 EAEQNVFLDIACCFKGYELKELEDVLHAHYGNCMKYQIRVLLDKSLLNIKQCQWSLTDVV 489

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            +H L++++G++IV+++SP+E G+RSRLW  +++  VL  + G+  +E I L+    E +
Sbjct: 490 TLHALIEKMGKEIVRKESPKEPGRRSRLWFHKDIIDVLEANKGSSEIEIIYLECSSSE-K 548

Query: 353 VYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
           V +        KM  L+ L + N    NG +YL N LR+L W+ YP + +PS+       
Sbjct: 549 VVVDWKGDELEKMQKLKTLIVKNGTFSNGPKYLPNSLRVLEWQKYPSRVIPSDFSQRNF- 607

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
            +Y  YS++            ++ + L + + L R+ D +   NLE    + C  L EIH
Sbjct: 608 -LYANYSKVTLHHLSCVRFVNMRELNLDNCQFLTRIHDVSNLSNLEIFSFQQCKNLIEIH 666

Query: 473 PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
            S+   NKL +LN + C+ L++ P  + + SL++L L       S  K L+         
Sbjct: 667 KSVGFLNKLEVLNAEGCSKLMSFP-PLKLTSLDELRL-------SDCKNLNN-------- 710

Query: 533 FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKC 592
              FPEI+  M ++  +  E T+I+ +P+S + L+ L+ L +K  + +  LP ++  +  
Sbjct: 711 ---FPEILGEMNNIKRICWENTSIKEVPVSFQNLTKLLYLTIKG-KGMVRLPSSIFRMPN 766

Query: 593 LRSLKLSGC 601
           L  +   GC
Sbjct: 767 LSDITAEGC 775



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 144/342 (42%), Gaps = 79/342 (23%)

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
           S+  L+ L +LN + C  L   P     L  L  L+LS C  L  FPEI+  M ++  + 
Sbjct: 668 SVGFLNKLEVLNAEGCSKLMSFPPL--KLTSLDELRLSDCKNLNNFPEILGEMNNIKRIC 725

Query: 622 LDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPET 681
            + TSIKEVP S + LTKL  L +   K +VRLPSSI  + +L  +   GC      P+ 
Sbjct: 726 WENTSIKEVPVSFQNLTKLLYLTIKG-KGMVRLPSSIFRMPNLSDITAEGCI----FPKL 780

Query: 682 LGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLM 741
             ++ S+       T  P+                             L  + L  CNL 
Sbjct: 781 DDKLSSML------TTSPNR----------------------------LWCITLKSCNLS 806

Query: 742 EGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQ 801
           +  LP  +     ++ L LS N+F  LP  I     L ++ L+DCK L+ +  +P N+  
Sbjct: 807 DEFLPIFVMWSAYVRILDLSGNNFTILPECIKDCHLLSDLILDDCKCLREIRGIPLNLTN 866

Query: 802 VRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLS 861
           +    C SL +               +C +   +L N+ L  +  +E+            
Sbjct: 867 LSAANCKSLTS---------------SCRN---MLLNQDLHEAGGKEF------------ 896

Query: 862 VVVPG-SEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
             +PG + IPEWF ++N G   +       + + KL  +AIC
Sbjct: 897 -YLPGFARIPEWFDHRNMGHKFS------FWFRNKLPSFAIC 931


>gi|297805242|ref|XP_002870505.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316341|gb|EFH46764.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1221

 Score =  325 bits (833), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 273/804 (33%), Positives = 415/804 (51%), Gaps = 105/804 (13%)

Query: 18  DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL------VSLQRQ 71
           +VRM+GI G  G+GKT+IAR +++ IS  F+ S  + N++       L      + LQ Q
Sbjct: 145 EVRMVGIWGPSGIGKTSIARSMFNQISSSFQLSTIMVNIKGCYPNPCLDEYRAQLQLQNQ 204

Query: 72  LLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSR 131
           +LSQ++   D  I +    + +   RL+ KKV LV+DDV  + QL +LA N EWFG GSR
Sbjct: 205 MLSQIINQKDIKISH----LGVAQERLKDKKVFLVLDDVDRLGQLVALA-NIEWFGRGSR 259

Query: 132 IIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAG 191
           III + D  +L  +G++ +YK    + DEA+++F M AF   QP                
Sbjct: 260 IIIITEDLRVLNAYGINHIYKVDFPSIDEAIEIFCMYAFGQKQPYH-------------- 305

Query: 192 GLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIAC 251
                    G  L G S  EW+ TL RL+     EI  IL+  +D L + +K++FL IAC
Sbjct: 306 ---------GFALRGMSKYEWKITLPRLKTCLDGEIESILKFGYDVLCDEDKELFLYIAC 356

Query: 252 FFKGND----RDYVTNFLEGCGFHPVIGIRVLIEKCLI--TVHNNTLWMHDLLQELGQQI 305
           FF         + + N+L+        G+R+L EK LI   V    + MHDLL + G++I
Sbjct: 357 FFNSGPIYKLEELLKNYLDVGK-----GLRILAEKSLIHTLVGAGFVKMHDLLVQFGKEI 411

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTEST--GTELVEGIVLDNYHHENEVYLCASAKAFS 363
            ++Q     GK   L    ++C VL++ T  G  ++ GI LD    E    +  S KA  
Sbjct: 412 SRKQFNHGFGKCQILVDARDICEVLSDDTTDGRRII-GINLDLSQIEENFNI--SEKAVK 468

Query: 364 KMTNLRLLKICNLQLPN--------GL--EYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
           K++NLR L I +  LP+        GL  +Y   +L  L W  +    LPS    +  +E
Sbjct: 469 KLSNLRFLNIYSSDLPHPDRLHTMQGLNCQYF-RKLISLRWMHFQKTSLPSTFNSEFLVE 527

Query: 414 IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
           + M  S++ +LW+G K L  +K M+LS+S+NL  +PD + A NLE LILE C+ L E+  
Sbjct: 528 LTMHDSKLQKLWEGTKPLRNIKWMVLSNSKNLKELPDLSTATNLETLILENCSSLMELPS 587

Query: 474 SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKF 533
           S+   + L  L +  C+SL+ LP              S    ++G   L  LD+ G    
Sbjct: 588 SIGKLSNLDYLCLGGCSSLLELP--------------SFTKNVTG---LVDLDLRGCSSL 630

Query: 534 REFPEIVEHMEHLSELHL-EGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKC 592
            E P  + H  +L  L L + +++ GLP  +     L  + LK C +L  LP ++ +L  
Sbjct: 631 VEIPSSIGHAINLRILDLSKCSSLVGLPSFVGNAINLRNVYLKGCSNLVELPSSIVDLIN 690

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNL 651
           L  L LSGCS L + P  +R+  +L  L L D +S+ ++PS +   TKLE LNL++C NL
Sbjct: 691 LEKLDLSGCSSLVELP-CIRNAVNLQMLDLSDCSSLVKLPSFVGNATKLEKLNLTNCSNL 749

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPIN 711
           + LP SI    +L+ L L  C +L  +P TL    +L+                    IN
Sbjct: 750 LELP-SIDNATNLQELLLENCSRLMKLPSTLRNAINLQ-------------------LIN 789

Query: 712 LMRKSVALKLPSLSGLCSLRKLNLTDC-NLMEGALPSDIGNLCSLKELYLSK-NSFVSLP 769
           L   S  +K+P++  + +L  L+L+ C +L+E  +P  IG + SL +LYL++ +S V LP
Sbjct: 790 LKNCSNVVKIPAIENVTNLNLLDLSGCSSLVE--IPPSIGTVTSLHKLYLNRCSSLVELP 847

Query: 770 TSITHLSKLLNIELEDCKRLQSLP 793
           +SI +++ L  + L+DC  L +LP
Sbjct: 848 SSIGNITSLQELNLQDCSNLLALP 871


>gi|15237080|ref|NP_192855.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|75100697|sp|O82500.1|Y4117_ARATH RecName: Full=Putative disease resistance protein At4g11170
 gi|3600057|gb|AAC35544.1| similar to several Arabidopsis thaliana disease resistance proteins
           [Arabidopsis thaliana]
 gi|332657580|gb|AEE82980.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 1095

 Score =  325 bits (832), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 223/690 (32%), Positives = 361/690 (52%), Gaps = 79/690 (11%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M++   K+  L+   S  VR++GI G  G+GKTTIAR +Y+     F  S F++NVRE  
Sbjct: 187 MEAHIAKMESLLCLESQGVRIVGIWGPAGVGKTTIARALYNQYHENFNLSIFMENVRESY 246

Query: 61  SKGGL------VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
            + GL      + LQ++ LS+LL   D  + +    +  +  RL+ +KVL+++DDV +++
Sbjct: 247 GEAGLDDYGLKLHLQQRFLSKLLDQKDLRVRH----LGAIEERLKSQKVLIILDDVDNIE 302

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL++LA   +WFG+ SRI++T++++ LL +H ++ +Y+    +  EAL +F   AFK   
Sbjct: 303 QLKALAKENQWFGNKSRIVVTTQNKQLLVSHDINHMYQVAYPSKQEALTIFCQHAFKQSS 362

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           P  +   L+      AG LPLAL VLGSF+ G+  +EW  +L  L+     E+  +L++ 
Sbjct: 363 PSDDLKHLAIEFTTLAGHLPLALRVLGSFMRGKGKEEWEFSLPTLKSRLDGEVEKVLKVG 422

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNF-LEGCGFHPVIGIRVLIEKCLIT-VHNNTL 292
           +DGL + EK +FL IAC F G   +Y+    +     +   G++VL +K LI    N  +
Sbjct: 423 YDGLHDHEKDLFLHIACIFSGQHENYLKQMIIANNDTYVSFGLQVLADKSLIQKFENGRI 482

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            MH LL++LG+++V++QS  E GKR  L   +E C VL+ +TGT  V GI LD    + E
Sbjct: 483 EMHSLLRQLGKEVVRKQSIYEPGKRQFLMNAKETCGVLSNNTGTGTVLGISLDMCEIKEE 542

Query: 353 VYLCASAKAFSKMTNLRLLKI-----------CNLQLP-NGLEYLSNRLRLLGWRGYPLK 400
           +Y+  S K F +M NL  LK              LQLP  GL YL  +LRLL W  YPL+
Sbjct: 543 LYI--SEKTFEEMRNLVYLKFYMSSPIDDKMKVKLQLPEEGLSYLP-QLRLLHWDAYPLE 599

Query: 401 FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
           F PS+ + +  +E+ M +S++ +LW G++ L  L+ M L+ S NL  +P+   A  L +L
Sbjct: 600 FFPSSFRPECLVELNMSHSKLKKLWSGVQPLRNLRTMNLNSSRNLEILPNLMEATKLNRL 659

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLK 520
            L  C  L E+  S+     LI+L M  C  L  +P  I + SLE L+ +          
Sbjct: 660 DLGWCESLVELPSSIKNLQHLILLEMSCCKKLEIIPTNINLPSLEVLHFRYCT------- 712

Query: 521 CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGL--VLLNLKNCR 578
                      + + FPEI  ++  L+   L GTAI  +P S++  S +  + +     +
Sbjct: 713 -----------RLQTFPEISTNIRLLN---LIGTAITEVPPSVKYWSKIDEICMERAKVK 758

Query: 579 SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLT 638
            L  +P  +  L CLR                            +   ++ +P  ++ L 
Sbjct: 759 RLVHVPYVLEKL-CLR----------------------------ENKELETIPRYLKYLP 789

Query: 639 KLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
           +L+++++S C N++ LP    ++ +L  +N
Sbjct: 790 RLQMIDISYCINIISLPKLPGSVSALTAVN 819



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 155/342 (45%), Gaps = 31/342 (9%)

Query: 580 LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTK 639
           LE  P +    +CL  L +S  SKLKK    V+ +++L  + L+ +   E+  ++   TK
Sbjct: 598 LEFFPSSFRP-ECLVELNMSH-SKLKKLWSGVQPLRNLRTMNLNSSRNLEILPNLMEATK 655

Query: 640 LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP 699
           L  L+L  C++LV LPSSI  L+ L  L +S C KLE +P  +  + SLE L        
Sbjct: 656 LNRLDLGWCESLVELPSSIKNLQHLILLEMSCCKKLEIIPTNIN-LPSLEVLHFR----- 709

Query: 700 HSTSWYSYIPI-------NLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGA-LPSDIGN 751
           + T   ++  I       NL+  ++    PS+     + ++ +    +     +P  +  
Sbjct: 710 YCTRLQTFPEISTNIRLLNLIGTAITEVPPSVKYWSKIDEICMERAKVKRLVHVPYVLEK 769

Query: 752 LCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLV 811
           LC L+E         ++P  + +L +L  I++  C  + SLP+LP ++  +    C SL 
Sbjct: 770 LC-LRE----NKELETIPRYLKYLPRLQMIDISYCINIISLPKLPGSVSALTAVNCESLQ 824

Query: 812 TLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPE 871
            L    +        I CL     LG ++        Y+   S    +++ V+PG  +P 
Sbjct: 825 ILHGHFRNKSIHLNFINCLK----LGQRAQEKIHRSVYIHQSS----YIADVLPGEHVPA 876

Query: 872 WFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRG 913
           +F Y++ GSSI +   SN  +  K   + +C V    K   G
Sbjct: 877 YFSYRSTGSSIMIH--SNKVDLSKFNRFKVCLVLGAGKRFEG 916


>gi|15234324|ref|NP_195338.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|2961374|emb|CAA18121.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|7270567|emb|CAB81524.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|332661225|gb|AEE86625.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1179

 Score =  325 bits (832), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 245/711 (34%), Positives = 358/711 (50%), Gaps = 62/711 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +++R ++L   +D    D   IG+ GM G+GKTT+  ++Y+   H+F    FL +VR++ 
Sbjct: 218 IETRLKQLEEKLDFECKDTLTIGVVGMPGIGKTTLTSMLYEKWQHDFLRCVFLHDVRKMW 277

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFD-GIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
                  + R +  + L   DN    V D   + L + L  KK L+V+D+V D KQ++ L
Sbjct: 278 KD---CMMDRSIFIEELLKDDNVNQEVADFSPESLKALLLSKKSLVVLDNVSDKKQIEVL 334

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAF--KTYQPLQ 177
            G  +W   GSRI IT+ D  +++   VD+ Y+   L   ++ + F+  AF  K   P++
Sbjct: 335 LGESDWIKRGSRIFITTSDRSVIEGM-VDDTYEVLRLTGRDSFEYFSYFAFSGKLCPPVR 393

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
             + LS     YA G PLAL++LG  L+G+    W   L +L   P   I D+L++S+D 
Sbjct: 394 TFMNLSRLFADYAKGNPLALKILGKELNGKDKTHWEEKLSKLMQSPNKTIQDVLRVSYDE 453

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGC---GFHPVIGIRVLIEKCLITVHNNTLWM 294
           L    K +FLD+ACFF+  D  YV   +E C       V  I+ L  K LI +    + M
Sbjct: 454 LGLSHKDVFLDVACFFRSGDEYYVRCLVESCDTEAIDTVSEIKDLASKFLINISGGRVEM 513

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           HDLL   G+++  + S        RLW  + V   L    G   V GI LD    + ++ 
Sbjct: 514 HDLLYTFGKELGSQGS-------RRLWNHKAVVGALKNRVGA--VRGIFLDMSELKKKLP 564

Query: 355 LCASAKAFSKMTNLRLLKI----CN--------LQLPNGLEYLSNRLRLLGWRGYPLKFL 402
           L  S   F KM NLR LK     C+        L  P GLE+  + +R L W  +PL  L
Sbjct: 565 LDRST--FIKMRNLRYLKFYSSRCDRECEADSKLNFPEGLEFPLDEIRYLYWLKFPLMKL 622

Query: 403 PSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
           P +       +  + YS I ELW+G K   KLK + LSHS  L  +     A +L++L L
Sbjct: 623 PKDFNPKNLTDFNLPYSEIEELWEGAKDTQKLKWVDLSHSRKLCNLSGLLNAESLQRLNL 682

Query: 463 EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCL 522
           EGCT L E+   +     LI LNM+ CTSL  LP         ++NL SL T I      
Sbjct: 683 EGCTSLEELPREMKRMKSLIFLNMRGCTSLRVLP---------RMNLISLKTLI------ 727

Query: 523 STLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEI 582
               ++     ++F  I +++E    LHL+GTAI  LP  +  L  L++LNLK+C+ L  
Sbjct: 728 ----LTNCSSIQKFQVISDNLE---TLHLDGTAIGKLPTDMVKLQKLIVLNLKDCKMLGA 780

Query: 583 LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL 642
           +P  +  LK L+ L LSGCSKLK F   + +MK L  L LDGT++KE+P       KL  
Sbjct: 781 VPEFLGKLKALQELVLSGCSKLKTFSVPIETMKCLQILLLDGTALKEMP-------KLLR 833

Query: 643 LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDI 693
            N S  ++L  L   I  L SL+ L LS    + N+   + Q+  L+ LD+
Sbjct: 834 FNSSRVEDLPELRRGINGLSSLRRLCLSRNNMISNLQIDINQLYHLKWLDL 884



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 143/487 (29%), Positives = 227/487 (46%), Gaps = 66/487 (13%)

Query: 542  HMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
            + E L  L+LEG T++  LP  ++ +  L+ LN++ C SL +LP    NL  L++L L+ 
Sbjct: 673  NAESLQRLNLEGCTSLEELPREMKRMKSLIFLNMRGCTSLRVLPRM--NLISLKTLILTN 730

Query: 601  CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
            CS ++KF  I     +L  L LDGT+I ++P+ +  L KL +LNL DCK L  +P  +  
Sbjct: 731  CSSIQKFQVI---SDNLETLHLDGTAIGKLPTDMVKLQKLIVLNLKDCKMLGAVPEFLGK 787

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK 720
            LK+L+ L LSGC KL+     +  ++ L+ L + GTA+                     +
Sbjct: 788  LKALQELVLSGCSKLKTFSVPIETMKCLQILLLDGTALK--------------------E 827

Query: 721  LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS-LPTSITHLSKLL 779
            +P L    S R  +L +       L   I  L SL+ L LS+N+ +S L   I  L  L 
Sbjct: 828  MPKLLRFNSSRVEDLPE-------LRRGINGLSSLRRLCLSRNNMISNLQIDINQLYHLK 880

Query: 780  NIELEDCKRLQSLPQLPPNIRQVRVNGC------ASLVTLLDALKLCKSDSTMIACLDSL 833
             ++L+ CK L S+P LPPN+  +  +GC      AS + LL  ++  +S      C +  
Sbjct: 881  WLDLKYCKNLTSIPLLPPNLEILDAHGCEKLKTVASPMALLKLMEQVQSKFIFTNCNNLE 940

Query: 834  KLLGNKSLAFSMLREYLEAVSNTRQH------LSVVVPGSEIPEWFMYQNEGSSITVTRP 887
            ++  N   +++  +  L+A    ++            PGS++P WF YQ  GS++ +  P
Sbjct: 941  QVAKNSITSYAQRKSQLDARRCYKEGGVSEALFIACFPGSDVPSWFNYQTFGSALRLKLP 1000

Query: 888  SNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFG---- 943
             + +   +L   A+C V          N F    T +    +G  I    F    G    
Sbjct: 1001 PH-WCDNRLSTIALCAVVTFPDTQDEINRFSIECTCEFKNELGTCIR---FSCTLGGSWI 1056

Query: 944  ---QAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESN-----HVNVSFEPWLGQGLEVKM 995
               +  SDH+++ Y S      I   LE +L+  E +       ++ FE   G G E+  
Sbjct: 1057 ESRKIDSDHVFIGYTSSS---HITKHLEGSLKLKEHDKCVPTEASIEFEVIDGAG-EIVN 1112

Query: 996  CGLHPVY 1002
            CGL  VY
Sbjct: 1113 CGLSLVY 1119



 Score = 45.4 bits (106), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 125/311 (40%), Gaps = 69/311 (22%)

Query: 419  SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGA-PNLEKLILEGCTRLYEIHPSLLL 477
            + IG+L   +  L KL V+ L   + L  +P+F G    L++L+L GC++L      +  
Sbjct: 752  TAIGKLPTDMVKLQKLIVLNLKDCKMLGAVPEFLGKLKALQELVLSGCSKLKTFSVPIET 811

Query: 478  HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
               L IL + D T+L  +P  +   S    +L  L   I+GL  L  L +S         
Sbjct: 812  MKCLQIL-LLDGTALKEMPKLLRFNSSRVEDLPELRRGINGLSSLRRLCLS--------- 861

Query: 538  EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
                              I  L + I  L  L  L+LK C++L  +P+   NL+ L +  
Sbjct: 862  --------------RNNMISNLQIDINQLYHLKWLDLKYCKNLTSIPLLPPNLEILDA-- 905

Query: 598  LSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLN----LSDCKNLVR 653
              GC KLK                        V S + LL  +E +      ++C NL +
Sbjct: 906  -HGCEKLKT-----------------------VASPMALLKLMEQVQSKFIFTNCNNLEQ 941

Query: 654  LP-SSIIALKSLKT-LNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPIN 711
            +  +SI +    K+ L+   C+K   V E L            G+ VP   SW++Y    
Sbjct: 942  VAKNSITSYAQRKSQLDARRCYKEGGVSEALFIA------CFPGSDVP---SWFNY---Q 989

Query: 712  LMRKSVALKLP 722
                ++ LKLP
Sbjct: 990  TFGSALRLKLP 1000


>gi|42568255|ref|NP_198990.3| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|42570590|ref|NP_851117.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|8843884|dbj|BAA97410.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007337|gb|AED94720.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007338|gb|AED94721.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1068

 Score =  325 bits (832), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 236/696 (33%), Positives = 374/696 (53%), Gaps = 78/696 (11%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M++  ++L  L+   S +V+MIGI G  G+GKTTIAR +++ IS  F    F++N++  S
Sbjct: 189 MEAHLKRLNSLLCLESDEVKMIGIWGPAGIGKTTIARTLFNKISSIFPFKCFMENLKG-S 247

Query: 61  SKGGL-----VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQ 115
            KGG      +SLQ+QLLS++LK  +  I +    +  +   L  +KVL+++DDV D++Q
Sbjct: 248 IKGGAEHYSKLSLQKQLLSEILKQENMKIHH----LGTIKQWLHDQKVLIILDDVDDLEQ 303

Query: 116 LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP 175
           L+ LA +  WFGSGSRII+T+ D+++LK H + ++Y     + +EAL++  + AFK    
Sbjct: 304 LEVLAEDPSWFGSGSRIIVTTEDKNILKAHRIQDIYHVDFPSEEEALEILCLSAFKQSSI 363

Query: 176 LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
                +L+ ++    G LPL L V+G+ L  +S +EW   L R+E      I +IL+I +
Sbjct: 364 PDGFEELANKVAELCGNLPLGLCVVGASLRRKSKNEWERLLSRIESSLDKNIDNILRIGY 423

Query: 236 DGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCL--ITVHNNTLW 293
           D L   ++ +FL IACFF     DY+T  L       V G  +L ++ L  I+   + + 
Sbjct: 424 DRLSTEDQSLFLHIACFFNNEKVDYLTALLADRKLDVVNGFNILADRSLVRISTDGHVVM 483

Query: 294 MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
            H LLQ+LG++IV  Q P E GKR  L + EE+  VLT+ TGTE V+GI  D  + E   
Sbjct: 484 HHYLLQKLGRRIVHEQWPNEPGKRQFLIEAEEIRDVLTKGTGTESVKGISFDTSNIEE-- 541

Query: 354 YLCASAKAFSKMTNLRLLKIC--------NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSN 405
            +     AF  M NL+ L+I          LQ+P  +EY+   +RLL W+ YP K LP  
Sbjct: 542 -VSVGKGAFEGMRNLQFLRIYRDSFNSEGTLQIPEDMEYIP-PVRLLHWQNYPRKSLPQR 599

Query: 406 LQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
              +  ++I M  S++ +LW GI+ L  LK + +S S +L  +P+ + A NLE L LE C
Sbjct: 600 FNPEHLVKIRMPSSKLKKLWGGIQPLPNLKSIDMSFSYSLKEIPNLSKATNLEILSLEFC 659

Query: 466 TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTL 525
             L E+  S+L  +KL ILN+++C+ L  +P  I + SLE+                  L
Sbjct: 660 KSLVELPFSILNLHKLEILNVENCSMLKVIPTNINLASLER------------------L 701

Query: 526 DVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPV 585
           D++G  + R FP+I  +++   +L+L  T I  +P S+   S L  L + +         
Sbjct: 702 DMTGCSELRTFPDISSNIK---KLNLGDTMIEDVPPSVGCWSRLDHLYIGS--------- 749

Query: 586 TVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNL 645
                + L+ L +  C               ++ L L  ++I+ +P SI  LT+L+ LN+
Sbjct: 750 -----RSLKRLHVPPC---------------ITSLVLWKSNIESIPESIIGLTRLDWLNV 789

Query: 646 SDC---KNLVRLPSSIIALKSLKTLNLSG-CFKLEN 677
           + C   K+++ LPSS+  L +   ++L   CF   N
Sbjct: 790 NSCRKLKSILGLPSSLQDLDANDCVSLKRVCFSFHN 825



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 141/303 (46%), Gaps = 58/303 (19%)

Query: 602 SKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           SKLKK    ++ + +L  + +  + S+KE+P+ +   T LE+L+L  CK+LV LP SI+ 
Sbjct: 613 SKLKKLWGGIQPLPNLKSIDMSFSYSLKEIPN-LSKATNLEILSLEFCKSLVELPFSILN 671

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK 720
           L  L+ LN+  C  L+ +P  +  + SLE LD++G                    S    
Sbjct: 672 LHKLEILNVENCSMLKVIPTNI-NLASLERLDMTGC-------------------SELRT 711

Query: 721 LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLS------------------- 761
            P +S   +++KLNL D  + +  +P  +G    L  LY+                    
Sbjct: 712 FPDISS--NIKKLNLGDTMIED--VPPSVGCWSRLDHLYIGSRSLKRLHVPPCITSLVLW 767

Query: 762 KNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCK 821
           K++  S+P SI  L++L  + +  C++L+S+  LP +++ +  N C SL       ++C 
Sbjct: 768 KSNIESIPESIIGLTRLDWLNVNSCRKLKSILGLPSSLQDLDANDCVSLK------RVCF 821

Query: 822 SDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSS 881
           S    I  L     L       ++  E  + +     +  + +PG +IPE F ++  G S
Sbjct: 822 SFHNPIRALSFNNCL-------NLDEEARKGIIQQSVYRYICLPGKKIPEEFTHKATGRS 874

Query: 882 ITV 884
           IT+
Sbjct: 875 ITI 877


>gi|7635470|emb|CAB88530.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1220

 Score =  324 bits (831), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 248/734 (33%), Positives = 377/734 (51%), Gaps = 46/734 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD   + LR  +D    +VRMIGI G  G+GKTTIAR +++ +S  F+ S  + N++   
Sbjct: 279 MDMLEQLLRLDLD----EVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCY 334

Query: 61  SK------GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
            +         + LQ Q+LSQ++   D  I      + +   RL+ KKV LV+D+V  + 
Sbjct: 335 PRPCFDEYSAQLQLQNQMLSQMINHKDIMI----SHLGVAQERLRDKKVFLVLDEVDQLG 390

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL +LA    WFG GSRIIIT+ D  +LK HG++ VYK    + DEA Q+F M AF   Q
Sbjct: 391 QLDALAKETRWFGPGSRIIITTEDLGVLKAHGINHVYKVEYPSNDEAFQIFCMNAFGQKQ 450

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           P +   +++  +   AG LPL L+VLGS L G+S  EW  TL RL+     +I  I+Q S
Sbjct: 451 PHEGFDEIAWEVTCLAGELPLGLKVLGSALRGKSKREWERTLPRLKTSLDGKIGSIIQFS 510

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
           +D L + +K +FL IAC F G     V   L G       G+ +L +K LI+     + M
Sbjct: 511 YDVLCDEDKYLFLYIACLFNGESTTKVKELL-GKFLDVKQGLHLLAQKSLISFDGERIHM 569

Query: 295 HDLLQELGQQIVQRQSPEE-LGKRSRLWKEEEVCHVL-TESTGTELVEGIVLDNYHHENE 352
           H LL++ G++  ++Q       KR  L     +C VL  ++T +    GI L+  + E E
Sbjct: 570 HTLLEQFGRETSRKQFVHHGFTKRQLLVGARGICEVLDDDTTDSRRFIGIHLELSNTEEE 629

Query: 353 VYLCASAKAFSKMTNLRLLKICNLQLPNGLE-------YLSNRLRLLGWRGYPLKFLPSN 405
           + +  S K   ++ +   ++I     P  L+       Y S ++R L W GY    LPS 
Sbjct: 630 LNI--SEKVLERVHDFHFVRIDASFQPERLQLALQDLIYHSPKIRSLNWYGYESLCLPST 687

Query: 406 LQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
              +  +E+ M  S + +LW+G K L  LK M LS+S  L  +P+ + A NLE+L L  C
Sbjct: 688 FNPEFLVELDMRSSNLRKLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELKLRNC 747

Query: 466 TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKS------LPTTISGL 519
           + L E+  S+     L IL++++C+SL  LP       L +L L++      LP +I   
Sbjct: 748 SSLVELPSSIEKLTSLQILDLENCSSLEKLPAIENATKLRELKLQNCSSLIELPLSIGTA 807

Query: 520 KCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCR 578
             L  L++SG     + P  +  +  L    L   +++  LP SI  L  L  L ++ C 
Sbjct: 808 TNLKQLNISGCSSLVKLPSSIGDITDLEVFDLSNCSSLVTLPSSIGNLQNLCKLIMRGCS 867

Query: 579 SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLT 638
            LE LP+ + NLK L +L L+ CS+LK FPEI      +SEL L GT+IKEVP SI   +
Sbjct: 868 KLEALPINI-NLKSLDTLNLTDCSQLKSFPEIS---THISELRLKGTAIKEVPLSIMSWS 923

Query: 639 KLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG--- 695
            L    +S  ++L+  P    A   +  L+LS    ++ VP  + ++  L +L ++    
Sbjct: 924 PLADFQISYFESLMEFPH---AFDIITKLHLSK--DIQEVPPWVKRMSRLRDLSLNNCNN 978

Query: 696 -TAVPHSTSWYSYI 708
             ++P  +    YI
Sbjct: 979 LVSLPQLSDSLDYI 992



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 187/409 (45%), Gaps = 82/409 (20%)

Query: 508  NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELL 566
            NL+ L      L+ L  +D+S     +E P +     +L EL L   +++  LP SIE L
Sbjct: 702  NLRKLWEGTKQLRNLKWMDLSYSSYLKELPNL-STATNLEELKLRNCSSLVELPSSIEKL 760

Query: 567  SGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS 626
            + L +L+L+NC SLE LP  + N   LR LKL  CS                       S
Sbjct: 761  TSLQILDLENCSSLEKLPA-IENATKLRELKLQNCS-----------------------S 796

Query: 627  IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIE 686
            + E+P SI   T L+ LN+S C +LV+LPSSI  +  L+  +LS C  L  +P ++G ++
Sbjct: 797  LIELPLSIGTATNLKQLNISGCSSLVKLPSSIGDITDLEVFDLSNCSSLVTLPSSIGNLQ 856

Query: 687  SLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALP 746
            +L +L + G       S    +PIN+              L SL  LNLTDC+ ++ + P
Sbjct: 857  NLCKLIMRG------CSKLEALPINI-------------NLKSLDTLNLTDCSQLK-SFP 896

Query: 747  SDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP------------- 793
             +I     + EL L   +   +P SI   S L + ++   + L   P             
Sbjct: 897  -EIST--HISELRLKGTAIKEVPLSIMSWSPLADFQISYFESLMEFPHAFDIITKLHLSK 953

Query: 794  ---QLPP------NIRQVRVNGCASLVTL------LDALKL--CKSDSTMIACLDSLKLL 836
               ++PP       +R + +N C +LV+L      LD +    CKS   +  C ++ ++ 
Sbjct: 954  DIQEVPPWVKRMSRLRDLSLNNCNNLVSLPQLSDSLDYIYADNCKSLERLDCCFNNPEIR 1013

Query: 837  GNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQ-NEGSSITV 884
                  F + +E  + + +T   +  + PG+++P  F+++   G S+ +
Sbjct: 1014 LYFPKCFKLNQEARDLIMHT--CIDAMFPGTQVPACFIHRATSGDSLKI 1060


>gi|30692151|ref|NP_190034.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644385|gb|AEE77906.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1194

 Score =  324 bits (830), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 248/734 (33%), Positives = 377/734 (51%), Gaps = 46/734 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD   + LR  +D    +VRMIGI G  G+GKTTIAR +++ +S  F+ S  + N++   
Sbjct: 279 MDMLEQLLRLDLD----EVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCY 334

Query: 61  SK------GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
            +         + LQ Q+LSQ++   D  I      + +   RL+ KKV LV+D+V  + 
Sbjct: 335 PRPCFDEYSAQLQLQNQMLSQMINHKDIMI----SHLGVAQERLRDKKVFLVLDEVDQLG 390

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL +LA    WFG GSRIIIT+ D  +LK HG++ VYK    + DEA Q+F M AF   Q
Sbjct: 391 QLDALAKETRWFGPGSRIIITTEDLGVLKAHGINHVYKVEYPSNDEAFQIFCMNAFGQKQ 450

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           P +   +++  +   AG LPL L+VLGS L G+S  EW  TL RL+     +I  I+Q S
Sbjct: 451 PHEGFDEIAWEVTCLAGELPLGLKVLGSALRGKSKREWERTLPRLKTSLDGKIGSIIQFS 510

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
           +D L + +K +FL IAC F G     V   L G       G+ +L +K LI+     + M
Sbjct: 511 YDVLCDEDKYLFLYIACLFNGESTTKVKELL-GKFLDVKQGLHLLAQKSLISFDGERIHM 569

Query: 295 HDLLQELGQQIVQRQSPEE-LGKRSRLWKEEEVCHVL-TESTGTELVEGIVLDNYHHENE 352
           H LL++ G++  ++Q       KR  L     +C VL  ++T +    GI L+  + E E
Sbjct: 570 HTLLEQFGRETSRKQFVHHGFTKRQLLVGARGICEVLDDDTTDSRRFIGIHLELSNTEEE 629

Query: 353 VYLCASAKAFSKMTNLRLLKICNLQLPNGLE-------YLSNRLRLLGWRGYPLKFLPSN 405
           + +  S K   ++ +   ++I     P  L+       Y S ++R L W GY    LPS 
Sbjct: 630 LNI--SEKVLERVHDFHFVRIDASFQPERLQLALQDLIYHSPKIRSLNWYGYESLCLPST 687

Query: 406 LQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
              +  +E+ M  S + +LW+G K L  LK M LS+S  L  +P+ + A NLE+L L  C
Sbjct: 688 FNPEFLVELDMRSSNLRKLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELKLRNC 747

Query: 466 TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKS------LPTTISGL 519
           + L E+  S+     L IL++++C+SL  LP       L +L L++      LP +I   
Sbjct: 748 SSLVELPSSIEKLTSLQILDLENCSSLEKLPAIENATKLRELKLQNCSSLIELPLSIGTA 807

Query: 520 KCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCR 578
             L  L++SG     + P  +  +  L    L   +++  LP SI  L  L  L ++ C 
Sbjct: 808 TNLKQLNISGCSSLVKLPSSIGDITDLEVFDLSNCSSLVTLPSSIGNLQNLCKLIMRGCS 867

Query: 579 SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLT 638
            LE LP+ + NLK L +L L+ CS+LK FPEI      +SEL L GT+IKEVP SI   +
Sbjct: 868 KLEALPINI-NLKSLDTLNLTDCSQLKSFPEIS---THISELRLKGTAIKEVPLSIMSWS 923

Query: 639 KLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG--- 695
            L    +S  ++L+  P    A   +  L+LS    ++ VP  + ++  L +L ++    
Sbjct: 924 PLADFQISYFESLMEFPH---AFDIITKLHLSK--DIQEVPPWVKRMSRLRDLSLNNCNN 978

Query: 696 -TAVPHSTSWYSYI 708
             ++P  +    YI
Sbjct: 979 LVSLPQLSDSLDYI 992



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 187/409 (45%), Gaps = 82/409 (20%)

Query: 508  NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELL 566
            NL+ L      L+ L  +D+S     +E P +     +L EL L   +++  LP SIE L
Sbjct: 702  NLRKLWEGTKQLRNLKWMDLSYSSYLKELPNL-STATNLEELKLRNCSSLVELPSSIEKL 760

Query: 567  SGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS 626
            + L +L+L+NC SLE LP  + N   LR LKL  CS                       S
Sbjct: 761  TSLQILDLENCSSLEKLPA-IENATKLRELKLQNCS-----------------------S 796

Query: 627  IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIE 686
            + E+P SI   T L+ LN+S C +LV+LPSSI  +  L+  +LS C  L  +P ++G ++
Sbjct: 797  LIELPLSIGTATNLKQLNISGCSSLVKLPSSIGDITDLEVFDLSNCSSLVTLPSSIGNLQ 856

Query: 687  SLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALP 746
            +L +L + G       S    +PIN+              L SL  LNLTDC+ ++ + P
Sbjct: 857  NLCKLIMRG------CSKLEALPINI-------------NLKSLDTLNLTDCSQLK-SFP 896

Query: 747  SDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP------------- 793
             +I     + EL L   +   +P SI   S L + ++   + L   P             
Sbjct: 897  -EIST--HISELRLKGTAIKEVPLSIMSWSPLADFQISYFESLMEFPHAFDIITKLHLSK 953

Query: 794  ---QLPP------NIRQVRVNGCASLVT---LLDALKL-----CKSDSTMIACLDSLKLL 836
               ++PP       +R + +N C +LV+   L D+L       CKS   +  C ++ ++ 
Sbjct: 954  DIQEVPPWVKRMSRLRDLSLNNCNNLVSLPQLSDSLDYIYADNCKSLERLDCCFNNPEIR 1013

Query: 837  GNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQ-NEGSSITV 884
                  F + +E  + + +T   +  + PG+++P  F+++   G S+ +
Sbjct: 1014 LYFPKCFKLNQEARDLIMHT--CIDAMFPGTQVPACFIHRATSGDSLKI 1060


>gi|334186702|ref|NP_001190772.1| P-loop NTPase and Toll/interleukin-1 receptor (TIR) homology domain
           protein [Arabidopsis thaliana]
 gi|332658791|gb|AEE84191.1| P-loop NTPase and Toll/interleukin-1 receptor (TIR) homology domain
           protein [Arabidopsis thaliana]
          Length = 834

 Score =  324 bits (830), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 216/603 (35%), Positives = 330/603 (54%), Gaps = 51/603 (8%)

Query: 8   LRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVS 67
           L  L  S S+DV ++GI G+ G+GKT+IAR +++L +  ++   FL +   +        
Sbjct: 226 LALLNHSQSTDVEIMGIWGIAGIGKTSIAREIFELHAPHYDFCYFLQDFHLMCQMKRPRQ 285

Query: 68  LQRQLLSQLLK----LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNR 123
           L+   +S+L      L  + +   F     +     +K +LLV+DDV + +  +++ G  
Sbjct: 286 LREDFISKLFGEEKGLGASDVKPSF-----MRDWFHKKTILLVLDDVSNARDAEAVIGGF 340

Query: 124 EWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLS 183
            WF  G RII+TSR + +L    V + Y+   L+  E+ +L         Q L     + 
Sbjct: 341 GWFSHGHRIILTSRSKQVLVQCKVKKPYEIQKLSDFESFRL-------CKQYLDGENPVI 393

Query: 184 ARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEK 243
           + +I  + G+PLAL++L S +S + +   +  L+ L  +PP++I +  + SFDGL E EK
Sbjct: 394 SELISCSSGIPLALKLLVSSVSKQYITNMKDHLQSLRKDPPTQIQEAFRRSFDGLDENEK 453

Query: 244 KIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQ 303
            IFLD+ACFF+G  +DY    L+ CGF   +GI  LI++ LI++ +N + M    Q++G+
Sbjct: 454 NIFLDLACFFRGQSKDYAVLLLDACGFFTYMGICELIDESLISLVDNKIEMPIPFQDMGR 513

Query: 304 QIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFS 363
            IV  +  E+  +RSRLW  +++  VLT ++GTE +EGI LD      E+    S   F 
Sbjct: 514 IIVHEED-EDPCERSRLWDSKDIVDVLTNNSGTEAIEGIFLDASDLTCEL----SPTVFG 568

Query: 364 KMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
           KM NLRLLK         C L LP+GL+ L + L LL W  YPL +LP        +E+ 
Sbjct: 569 KMYNLRLLKFYCSTSGNQCKLTLPHGLDTLPDELSLLHWENYPLVYLPQKFNPVNLVELN 628

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           M YS + +LW+G K+L+KLK + LSHS  L  +   + A NLE + LEGCT L ++  S+
Sbjct: 629 MPYSNMEKLWEGKKNLEKLKNIKLSHSRELTDILMLSEALNLEHIDLEGCTSLIDVSMSI 688

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
               KL+ LNMKDC+ L +LP  + + +L+ LNL       SG                E
Sbjct: 689 PCCGKLVSLNMKDCSRLRSLPSMVDLTTLKLLNL-------SGCS--------------E 727

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS-NLKCLR 594
           F +I +   +L E++L GT+IR LPLSI  L+ LV L+L+NC  L+ +P T +  LK  R
Sbjct: 728 FEDIQDFAPNLEEIYLAGTSIRELPLSIRNLTELVTLDLENCERLQEMPRTCNWKLKFFR 787

Query: 595 SLK 597
             K
Sbjct: 788 KKK 790



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 9/171 (5%)

Query: 492 LITLPGKILMKSLEKLNL--KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHME--HLS 547
           L+ LP K    +L +LN+   ++     G K L  L        RE  +I+   E  +L 
Sbjct: 612 LVYLPQKFNPVNLVELNMPYSNMEKLWEGKKNLEKLKNIKLSHSRELTDILMLSEALNLE 671

Query: 548 ELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKK 606
            + LEG T++  + +SI     LV LN+K+C  L  LP  V +L  L+ L LSGCS+   
Sbjct: 672 HIDLEGCTSLIDVSMSIPCCGKLVSLNMKDCSRLRSLPSMV-DLTTLKLLNLSGCSE--- 727

Query: 607 FPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSS 657
           F +I     +L E++L GTSI+E+P SI  LT+L  L+L +C+ L  +P +
Sbjct: 728 FEDIQDFAPNLEEIYLAGTSIRELPLSIRNLTELVTLDLENCERLQEMPRT 778



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 12/151 (7%)

Query: 650 NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWY---- 705
           N+ +L      L+ LK + LS   +L ++   L +  +LE +D+ G       S      
Sbjct: 633 NMEKLWEGKKNLEKLKNIKLSHSRELTDIL-MLSEALNLEHIDLEGCTSLIDVSMSIPCC 691

Query: 706 -SYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLC-SLKELYLSKN 763
              + +N+   S    LPS+  L +L+ LNL+ C+  E     DI +   +L+E+YL+  
Sbjct: 692 GKLVSLNMKDCSRLRSLPSMVDLTTLKLLNLSGCSEFE-----DIQDFAPNLEEIYLAGT 746

Query: 764 SFVSLPTSITHLSKLLNIELEDCKRLQSLPQ 794
           S   LP SI +L++L+ ++LE+C+RLQ +P+
Sbjct: 747 SIRELPLSIRNLTELVTLDLENCERLQEMPR 777


>gi|357452851|ref|XP_003596702.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355485750|gb|AES66953.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 747

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 188/486 (38%), Positives = 282/486 (58%), Gaps = 37/486 (7%)

Query: 1   MDSRCEKLRFLM--DSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE 58
           +  R E+L  L+  DS   + R IGI GM G+ KTT+A V+YD +S++F+AS F++NV +
Sbjct: 246 IQPRVEELESLLKLDSKDYEFRAIGIWGMAGIRKTTLASVLYDRVSYQFDASCFIENVSK 305

Query: 59  ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
           I   GG  ++Q+Q+L Q +   +   ++  +   ++  RL  KK L+V+D+   ++Q++ 
Sbjct: 306 IYKDGGATAVQKQILRQTIDEKNLETYSPSEISGIIRKRLCNKKFLVVLDNADLLEQMEE 365

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           LA N E  G GSRIIIT+RD                    ++A +LF  KAFK+  P   
Sbjct: 366 LAINPELLGKGSRIIITTRD-------------------INDARKLFYRKAFKSEDPTSG 406

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
           CV+L+  +++YA GLPLA+ V+GSFL  R  ++WR  L RL   P + ++D+LQ+SF+GL
Sbjct: 407 CVKLTPEVLKYAQGLPLAVRVVGSFLCTRDANQWRDALYRLRNNPDNNVMDVLQVSFEGL 466

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
              +++IFL IACFFKG   DYV   L+ CG HP IGI+ LIE+  IT+ NN + MH++L
Sbjct: 467 HSEDREIFLHIACFFKGEKEDYVKRILDACGLHPHIGIQSLIERSFITIRNNEILMHEML 526

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           QELG++IV++Q P + G  SRLW  ++   V+   TGT  +  I+LD   H +E Y    
Sbjct: 527 QELGKKIVRQQFPFQPGSWSRLWLYDDFYSVMMTETGTNNINAIILDQKEHISE-YPQLR 585

Query: 359 AKAFSKMTNLRLLKIC-NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
           A+A S M  L++L +  +      L +LSN L+ L W GYP   LP N +    +E+ M 
Sbjct: 586 AEALSIMRGLKILILLFHKNFSGSLTFLSNSLQYLLWYGYPFASLPLNFEPFCLVELNMP 645

Query: 418 YSRIGELWKGIKHL--DKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL------- 468
           YS I  LW G K +   +L+  +L   +N++      G P L  L+L   T++       
Sbjct: 646 YSSIQRLWDGHKEVVCTELQYFLLHRKDNILLS---CGLPEL--LLLSNATKMKQTVYPI 700

Query: 469 YEIHPS 474
           YE+ PS
Sbjct: 701 YEVDPS 706


>gi|240255823|ref|NP_193173.4| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658031|gb|AEE83431.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1008

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 237/694 (34%), Positives = 370/694 (53%), Gaps = 62/694 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMI-GICGMGGLGKTTIARVVYDLISHEFEASGFLDNV--- 56
           +++  E++++L+D    D  MI GICG  G+GKTTIAR +Y L+   F+ S F++N+   
Sbjct: 147 LEAHLEEMKYLLDLDYKDGAMIVGICGPAGIGKTTIARALYSLLLSSFQLSCFVENLSGS 206

Query: 57  --REISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
             R +   G  + LQ QLLS++L      I++    +  +  RL  +KVL+V+DDV D+K
Sbjct: 207 DNRGLDEYGFKLRLQEQLLSKILNQNGMRIYH----LGAIQERLCDQKVLIVLDDVNDLK 262

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL++LA    WFG GSRII+T+ D+ LL+ HG+++ Y     + +EAL++F + AF+   
Sbjct: 263 QLEALANETSWFGPGSRIIVTTEDKGLLEQHGINKTYHVGFPSIEEALEIFCIYAFRKSS 322

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           P     +L+ R+      LPL L V+GS L G+  DEW + L+RLE      I   L++ 
Sbjct: 323 PPDGFKKLTKRVTNVFDNLPLGLRVMGSSLRGKGEDEWEALLDRLETSLDRNIEGALRVG 382

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLI-TVHNNTLW 293
           +D LQE E+ +FL IA FF  N  ++V   L         G+++L  K L+    +  + 
Sbjct: 383 YDSLQEEEQALFLHIAVFFNYNKDEHVIAMLADSNLDVKQGLKILTNKSLVYRSTSGKIV 442

Query: 294 MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
           MH LLQ++G++ +QRQ P    KR  L    E+C+VL   T T    GI LD     N+V
Sbjct: 443 MHKLLQQVGRKAIQRQEP---WKRHILIDAHEICYVLENDTDTRAALGISLDT-SGINKV 498

Query: 354 YLCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSN 405
            +  S  AF +M NLR L + N        + +P  LE+  + LRLL W  YP   LP+ 
Sbjct: 499 II--SEGAFKRMRNLRFLSVYNTRYVKNDQVDIPEDLEFPPH-LRLLRWEAYPSNALPTT 555

Query: 406 LQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
              +  +E+ M  S++ +LW+G + L  LK M L+ S +L  +PD + A NLE+L L  C
Sbjct: 556 FHPEYLVELDMKESQLEKLWQGTQPLTNLKKMDLTRSSHLKELPDLSNATNLERLELSYC 615

Query: 466 TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTL 525
             L EI  S     KL  L + +CT L  +P  I + SL+  N+                
Sbjct: 616 KSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFFNMH--------------- 660

Query: 526 DVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLK---NCRSLEI 582
              G  + ++FP I     H+S L ++ T +  LP SI L + L  L +    N ++L  
Sbjct: 661 ---GCFQLKKFPGI---STHISRLVIDDTLVEELPTSIILCTRLRTLMISGSGNFKTLTY 714

Query: 583 LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLE 641
           LP++++ L  LR      C+ ++K P+ ++ + +LS L + G  ++K +P   +L   + 
Sbjct: 715 LPLSLTYLD-LR------CTGIEKIPDWIKDLHELSFLHIGGCRNLKSLP---QLPLSIR 764

Query: 642 LLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
            LN  DC++L  + + + +L S   LN + CFKL
Sbjct: 765 WLNACDCESLESV-ACVSSLNSFVDLNFTNCFKL 797



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 160/361 (44%), Gaps = 57/361 (15%)

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
           + PE +E   HL  L  E      LP +      LV L++K  + LE L      L  L+
Sbjct: 528 DIPEDLEFPPHLRLLRWEAYPSNALPTTFHP-EYLVELDMKESQ-LEKLWQGTQPLTNLK 585

Query: 595 SLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRL 654
            + L+  S LK+ P++  +                        T LE L LS CK+LV +
Sbjct: 586 KMDLTRSSHLKELPDLSNA------------------------TNLERLELSYCKSLVEI 621

Query: 655 PSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG----TAVPHSTSWYSYIPI 710
           PSS   L+ L+TL +  C KLE VP TL  + SL+  ++ G       P  ++  S + I
Sbjct: 622 PSSFSELRKLETLVIHNCTKLEVVP-TLINLASLDFFNMHGCFQLKKFPGISTHISRLVI 680

Query: 711 NLMRKSVALKLPSLSGLCS-LRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLP 769
           +    ++  +LP+   LC+ LR L ++      G   +      SL  L L       +P
Sbjct: 681 D---DTLVEELPTSIILCTRLRTLMISG----SGNFKTLTYLPLSLTYLDLRCTGIEKIP 733

Query: 770 TSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIAC 829
             I  L +L  + +  C+ L+SLPQLP +IR +    C SL +              +AC
Sbjct: 734 DWIKDLHELSFLHIGGCRNLKSLPQLPLSIRWLNACDCESLES--------------VAC 779

Query: 830 LDSLKLLG--NKSLAFSMLREYLEAVSNTRQHLSV-VVPGSEIPEWFMYQNEGSSITVTR 886
           + SL      N +  F + +E    +       S+ ++PG E+PE F +Q +G+ +T+ R
Sbjct: 780 VSSLNSFVDLNFTNCFKLNQETRRDLIQQSFFRSLRILPGREVPETFNHQAKGNVLTI-R 838

Query: 887 P 887
           P
Sbjct: 839 P 839


>gi|356561218|ref|XP_003548880.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1059

 Score =  323 bits (829), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 224/584 (38%), Positives = 324/584 (55%), Gaps = 33/584 (5%)

Query: 1   MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++S   +++ L+D  S DV  M+GI G+  +GKTT+A  VY+ I+ +FEAS FL NVRE 
Sbjct: 191 LESPVLEVKSLLDIESDDVVHMVGIHGLAAVGKTTLAVAVYNSIADQFEASCFLANVRET 250

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ  LLS+ +      + N  +GI ++  +L++KKVLL++DDV + KQLQ++
Sbjct: 251 SNKIGLEDLQSILLSKTVGEKKIKLTNWREGIPIIKHKLKQKKVLLILDDVDEHKQLQAI 310

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            GN +WFG GSR+IIT+RDEHLL  H V   YK   LN   ALQL   KAF+  + +   
Sbjct: 311 IGNPDWFGRGSRVIITTRDEHLLALHNVKITYKVKELNEKHALQLLTQKAFELEKEVDPS 370

Query: 180 VQ-LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
              +  R + YA GLPLALEV+GS L  +S++EW S L   E  P  +I  IL++S+D L
Sbjct: 371 YHDILNRAVTYASGLPLALEVIGSNLFEKSIEEWESALNGYERIPDIKIYAILKVSYDAL 430

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVH--NNTLWMH 295
            E EK IFLDIAC FK  +   V + L    G      I VL++K LI +H  +  + +H
Sbjct: 431 NEDEKSIFLDIACCFKDYELAEVQDILYAHYGRCMKYHIGVLVKKSLINIHRLHKVIRLH 490

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           +L++++G++IV+R+SP E  KRSRLW  +++  VL E+ GT  +E I ++      EV  
Sbjct: 491 NLIEDMGKEIVRRESPTEPWKRSRLWFHDDINQVLQENKGTSKIEIICMNFSSFGEEVEW 550

Query: 356 CASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGW-----RGYPLKFLPSNLQMDK 410
                AF KM NL+ L I +     G ++L N LR+L W     + +P  F P  L + K
Sbjct: 551 --DGDAFKKMKNLKTLIIKSDCFSKGPKHLPNTLRVLEWWRCPSQDWPHNFNPKQLAICK 608

Query: 411 TIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYE 470
             +       +  L++  K    L  + LS  ++L  +PD +    LEKL    C  L+ 
Sbjct: 609 LPDNSFTSLGLAPLFE--KKFVNLTSLNLSMCDSLTEIPDVSCLSKLEKLSFARCRNLFT 666

Query: 471 IHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGD 530
           IH S+ L  KL IL+ + C  L + P  + + SLE+  L           C+S       
Sbjct: 667 IHHSVGLLEKLKILDAEGCRELKSFP-PLKLTSLERFELSY---------CVS------- 709

Query: 531 LKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL 574
                FPEI+  ME+++EL L    I  LP S   L+ L +L L
Sbjct: 710 --LESFPEILGKMENITELGLIDCPITKLPPSFRNLTRLQVLYL 751



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 157/392 (40%), Gaps = 89/392 (22%)

Query: 579 SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELL 637
           SL + P+       L SL LS C  L + P+ V  +  L +L F    ++  +  S+ LL
Sbjct: 616 SLGLAPLFEKKFVNLTSLNLSMCDSLTEIPD-VSCLSKLEKLSFARCRNLFTIHHSVGLL 674

Query: 638 TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL---DIS 694
            KL++L+   C+ L   P   + L SL+   LS C  LE+ PE LG++E++ EL   D  
Sbjct: 675 EKLKILDAEGCRELKSFPP--LKLTSLERFELSYCVSLESFPEILGKMENITELGLIDCP 732

Query: 695 GTAVPHS------------------------TSWYSYIPI--NLMRKSVA---------- 718
            T +P S                         ++ S I +   L R   A          
Sbjct: 733 ITKLPPSFRNLTRLQVLYLGQETYRLRGFDAATFISNICMMPELFRVEAAQLQWRLPDDV 792

Query: 719 LKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
           LKL S++   S++ L   +C+L +  LP       ++  L LS + F  +P  I     L
Sbjct: 793 LKLTSVA-CSSIQFLCFANCDLGDELLPLIFSCFVNVINLDLSWSKFTVIPECIKECRFL 851

Query: 779 LNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGN 838
             + L+ C  LQ    +PPN+++    GC +L +                   S+ +L N
Sbjct: 852 TILTLDFCNHLQEFRGIPPNLKKFSAIGCPALTS------------------SSISMLLN 893

Query: 839 KSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVG 898
           + L             +     +  +P  EIPEWF  Q+ G SI        + + +   
Sbjct: 894 QEL-------------HEAGDTNFSLPRVEIPEWFECQSRGPSIF------FWFRNEFPA 934

Query: 899 YAICCVFHVLKNSRGNNCFGSY--PTHQLNCH 928
            A+C V    K       F SY  P+  +N H
Sbjct: 935 IAVCVVNSDFKK------FSSYLVPSVIINGH 960


>gi|227438267|gb|ACP30623.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1262

 Score =  323 bits (827), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 246/724 (33%), Positives = 367/724 (50%), Gaps = 88/724 (12%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGG------LVSLQ 69
           S  V+MI + G  G+GKTT A V+Y+ +S  F  S FL+N+R    K         + LQ
Sbjct: 204 SEQVKMIVLVGPAGIGKTTTATVLYNQLSPGFPFSTFLENIRGSYEKPCGNDYQLKLRLQ 263

Query: 70  RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG 129
           +++LSQ+   +D  + +    + +   +L  K+VL+V+D+V    QL++ A  R WFG G
Sbjct: 264 KKMLSQIFNQSDIEVGH----LRVAQEKLSDKQVLVVLDEVDSWWQLEATAYQRGWFGPG 319

Query: 130 SRIIITSRDEHLLKTH--GVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARII 187
           S IIIT+ D  LLKT   G+D +Y+      DE+LQ+F   AF    P     +L+  + 
Sbjct: 320 SIIIITTEDRKLLKTLRLGIDHIYEMKFPTSDESLQIFCQYAFGQDSPYDGFEELAREVT 379

Query: 188 RYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFL 247
             AG LPL L V+GS+L G S ++W   L RL      EI   L+ S+DGL + +K +FL
Sbjct: 380 WLAGNLPLGLRVMGSYLRGMSREQWIDALPRLRSSLDREIESTLRFSYDGLSDKDKALFL 439

Query: 248 DIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQ 307
            IACFF+    + V + L+        GI+VL ++ LI++    + MH LLQ++G+ IV+
Sbjct: 440 HIACFFQYFKVESVKSCLKKSKLDVNHGIQVLADRSLISIEGGYVKMHSLLQKMGRGIVK 499

Query: 308 RQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHH-ENEVY--LCASAKAFSK 364
           ++S +E GKR  LW   E+  +L ++TGT  V  + L  Y + EN     +  S  AF +
Sbjct: 500 KESLKEPGKREFLWSTSEIIELLDKNTGTGNVIALSLRTYENSENSKRGKIQISKSAFDE 559

Query: 365 MTNLRLLKIC--NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIG 422
           M NL+ LK+   N+++P GL  L  +LRL+ W   PL+F PS       +E+ M  S+  
Sbjct: 560 MNNLQFLKVKSDNVRIPEGLNCLPEKLRLIHWDNCPLRFWPSKFSAKFLVELIMPISKFE 619

Query: 423 ELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLI 482
           +LW+GIK L  LK+M L +S  L  +PD + A +LEKL L  C  L E+  S+   +KL 
Sbjct: 620 KLWEGIKPLYCLKLMDLRNSLYLKEIPDLSKATSLEKLDLTDCESLLELTSSIGNASKLR 679

Query: 483 ILNMKDCTSLITLPGKI-LMKSLEKLNLK------------------------SLPTTIS 517
           + N+  C  L  LP  +  + +LE+LNL                         +LP++IS
Sbjct: 680 VCNLSYCRLLKELPSSMGRLINLEELNLSHCVGLKEFSGYSTLKKLDLGYSMVALPSSIS 739

Query: 518 GLKCLSTLDVSG-DLKFREFPEIVEH---MEHLSELHLEGTAIRGLPLSIELLSGLVLLN 573
              CL  LD+SG  LKF E P I +     + + EL L  T I  +P  IE L  L  L 
Sbjct: 740 TWSCLYKLDMSGLGLKFFEPPSIRDFPNVPDSIVELVLSRTGIEEVPPWIEKLFRLRKLI 799

Query: 574 LKNCRSLEILPVTVSNLKCLRSLKLSGC---------------------SKLKKFPEIVR 612
           +  C  L+ +   VS L+ L  L LS C                     +K++  P++ R
Sbjct: 800 MNGCEKLKKISPKVSKLENLELLFLSFCDILLDGDYDSPLSYCYDDVFEAKIEWGPDLKR 859

Query: 613 SMKDLSELFLD---------------------GTSIKEVPSSIELLTKLELLNLSDCKNL 651
           S+K +S+  +D                     G   K +P  I  L  L  L+++ C+NL
Sbjct: 860 SLKLISDFNIDDILPICLPEKALKSSISVSLCGACFKTIPYCIRSLRGLSKLDITQCRNL 919

Query: 652 VRLP 655
           V LP
Sbjct: 920 VALP 923



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 10/211 (4%)

Query: 627 IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIE 686
           +KE+P  +   T LE L+L+DC++L+ L SSI     L+  NLS C  L+ +P ++G++ 
Sbjct: 642 LKEIPD-LSKATSLEKLDLTDCESLLELTSSIGNASKLRVCNLSYCRLLKELPSSMGRLI 700

Query: 687 SLEELDISGTAVPHSTSWYSYI-PINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGAL 745
           +LEEL++S        S YS +  ++L    VAL   S+S    L KL+++   L     
Sbjct: 701 NLEELNLSHCVGLKEFSGYSTLKKLDLGYSMVALP-SSISTWSCLYKLDMSGLGLKFFEP 759

Query: 746 PS--DIGNLC-SLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
           PS  D  N+  S+ EL LS+     +P  I  L +L  + +  C++L+   ++ P + ++
Sbjct: 760 PSIRDFPNVPDSIVELVLSRTGIEEVPPWIEKLFRLRKLIMNGCEKLK---KISPKVSKL 816

Query: 803 RVNGCASLVTLLDALKLCKSDSTMIACLDSL 833
             N     ++  D L     DS +  C D +
Sbjct: 817 E-NLELLFLSFCDILLDGDYDSPLSYCYDDV 846


>gi|41387774|gb|AAS01763.1| TIR-NBS-LRR [Arabidopsis thaliana]
          Length = 1160

 Score =  322 bits (826), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 253/759 (33%), Positives = 383/759 (50%), Gaps = 74/759 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLD-----N 55
           ++    ++  L+   S +VRM+GI G  G+GKTTIAR ++  +S  F+ S F+D     N
Sbjct: 186 IEDHIAEMSLLLQLESEEVRMVGISGSSGIGKTTIARALFKRLSRHFQGSTFIDRAFVSN 245

Query: 56  VREISSKGG------LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDD 109
            R I S          + LQ   LS++L   D  I    D    L  RL+ +KVL++IDD
Sbjct: 246 SRNIYSGANPDDPNMKLQLQGHFLSEILGKKDIKI----DDPAALEERLKHQKVLIIIDD 301

Query: 110 VVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKA 169
           + D+  L +L G  +WFG GSRII+ + D+H L  HG+D +Y+        A Q+    A
Sbjct: 302 LDDIMVLDTLVGQTQWFGYGSRIIVVTNDKHFLTAHGIDHIYEVSFPTDVHAYQMLCQSA 361

Query: 170 FKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLE--IEPPSEI 227
           FK     +    L   ++R+AG  PL L +LG +L  R ++ W   L RLE  +    +I
Sbjct: 362 FKQNYAPKGFEDLVVDVVRHAGSFPLGLNLLGKYLRRRDMEYWMDMLPRLENGLRIDGKI 421

Query: 228 LDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV 287
             IL+IS+DGL+  +++IF  IAC F   +   + + L          +  L +K LI V
Sbjct: 422 EKILRISYDGLESEDQEIFRHIACLFNHMEVTTIKSLLADSDVS--FALENLADKSLIHV 479

Query: 288 HNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNY 347
               + MH  LQE+G++IV+ QS ++ G+R  L    ++  +L   TGT+ V GI LD  
Sbjct: 480 RQGYVVMHRSLQEMGRKIVRIQSIDKPGEREFLVDPNDIHDILNACTGTQKVLGISLDT- 538

Query: 348 HHENEVYLCASAKAFSKMTNLRLLKICN-------LQLPNGLEYLSNRLRLLGWRGYPLK 400
              N   L    +AF  M+NLR L+I N       L LP   +YL   L+LL W  +P++
Sbjct: 539 --RNIRELDVHQRAFKGMSNLRFLEIKNFRLKEDSLHLPPSFDYLPRTLKLLSWSKFPMR 596

Query: 401 FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
            +P + + +  +++ M YS++ +LW+G   L  LK M L  S NL  +PD + A NLE L
Sbjct: 597 CMPFDFRPENLVKLEMKYSKLHKLWEGDVPLTCLKEMDLYASSNLKVIPDLSKATNLEIL 656

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPT 514
            L+ C  L E+  S+   NKL+ L+M DC SL  LP    +KSL++LN      LK+ P 
Sbjct: 657 NLQFCLSLVELPSSIRNLNKLLNLDMLDCKSLKILPTGFNLKSLDRLNFSHCSKLKTFPK 716

Query: 515 TISGLKCL-----------STLDVSGDLKFREFPE--IVEHME---------------HL 546
             + +  L           S L +   +KF    E   V+  E                L
Sbjct: 717 FSTNISVLNLSQTNIEEFPSNLHLKNLVKFSISKEESDVKQWEGEKPLTPFLAMMLSPTL 776

Query: 547 SELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
           + LHLE   ++  LP S + L+ L  L +  C +LE LP  + NL+ L SL   GCS+L+
Sbjct: 777 TSLHLENLPSLVELPSSFQNLNQLKRLFIVRCINLETLPTGI-NLQSLDSLSFKGCSRLR 835

Query: 606 KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLK 665
            FPEI     ++S L+LD T+I++VP  IE  + L  L++  C  L  +   +  LK LK
Sbjct: 836 SFPEIS---TNISVLYLDETAIEDVPWWIEKFSNLTELSMHSCSRLKWVFLHMSKLKHLK 892

Query: 666 TLNLSGCFKLENV-----PETLGQIESLEELDISGTAVP 699
                 C KL  V     P  + ++   + +D + +++P
Sbjct: 893 EALFPNCGKLTRVELSGYPSGM-EVMKADNIDTASSSLP 930



 Score = 67.8 bits (164), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 111/464 (23%), Positives = 184/464 (39%), Gaps = 133/464 (28%)

Query: 519  LKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT-AIRGLPLSIELLSGLVLLNLKNC 577
            L CL  +D+      +  P++ +   +L  L+L+   ++  LP SI  L+ L+ L++ +C
Sbjct: 627  LTCLKEMDLYASSNLKVIPDLSK-ATNLEILNLQFCLSLVELPSSIRNLNKLLNLDMLDC 685

Query: 578  RSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIEL- 636
            +SL+ILP T  NLK L  L  S CSKLK FP+      ++S L L  T+I+E PS++ L 
Sbjct: 686  KSLKILP-TGFNLKSLDRLNFSHCSKLKTFPKFS---TNISVLNLSQTNIEEFPSNLHLK 741

Query: 637  -LTKLEL------------------------------LNLSDCKNLVRLPSSIIALKSLK 665
             L K  +                              L+L +  +LV LPSS   L  LK
Sbjct: 742  NLVKFSISKEESDVKQWEGEKPLTPFLAMMLSPTLTSLHLENLPSLVELPSSFQNLNQLK 801

Query: 666  TLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLS 725
             L +  C  LE +P  +  ++SL+ L   G +   S                    P +S
Sbjct: 802  RLFIVRCINLETLPTGIN-LQSLDSLSFKGCSRLRS-------------------FPEIS 841

Query: 726  GLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELED 785
               S+                           LYL + +   +P  I   S L  + +  
Sbjct: 842  TNISV---------------------------LYLDETAIEDVPWWIEKFSNLTELSMHS 874

Query: 786  CKRLQSL-----------PQLPPN---IRQVRVNGCASLVTLLDALKLCKSDSTM----I 827
            C RL+ +             L PN   + +V ++G  S + ++ A  +  + S++    +
Sbjct: 875  CSRLKWVFLHMSKLKHLKEALFPNCGKLTRVELSGYPSGMEVMKADNIDTASSSLPKVVL 934

Query: 828  ACLDSLKLLGNKSLAF--SMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSS---- 881
            + LD   L     L    S++  Y+           +     E+P +F Y+  GSS    
Sbjct: 935  SFLDCFNLDPETVLHHQESIIFNYM-----------LFTGKEEVPSYFTYRTTGSSSLTI 983

Query: 882  ----ITVTRP------SNLYNKKKLVGYAICCVFHVLKNSRGNN 915
                + +++P        L   K++ G  + C F   K+  GNN
Sbjct: 984  PLLHVHLSQPFFRFRIGALVKNKEMPGIEVKCEF---KDRFGNN 1024



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 143/335 (42%), Gaps = 62/335 (18%)

Query: 485 NMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHME 544
           ++ D  +  T   K+L  SL+  N++ L       K +S L          F EI     
Sbjct: 517 DIHDILNACTGTQKVLGISLDTRNIRELDVHQRAFKGMSNL---------RFLEIKNFRL 567

Query: 545 HLSELHLEGTAIRGLPLSIELLS----------------GLVLLNLKNCRSLEILPVTVS 588
               LHL   +   LP +++LLS                 LV L +K  +  ++    V 
Sbjct: 568 KEDSLHLP-PSFDYLPRTLKLLSWSKFPMRCMPFDFRPENLVKLEMKYSKLHKLWEGDVP 626

Query: 589 NLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSD 647
            L CL+ + L   S LK  P++ ++  +L  L L    S+ E+PSSI  L KL  L++ D
Sbjct: 627 -LTCLKEMDLYASSNLKVIPDLSKAT-NLEILNLQFCLSLVELPSSIRNLNKLLNLDMLD 684

Query: 648 CKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSY 707
           CK+L  LP+    LKSL  LN S C KL+  P+    I  L                   
Sbjct: 685 CKSLKILPTGF-NLKSLDRLNFSHCSKLKTFPKFSTNISVL------------------- 724

Query: 708 IPINLMRKSVALKLPSLSGLCSLRKLNLT----DCNLMEGALP--SDIGNLCS--LKELY 759
              NL + ++  + PS   L +L K +++    D    EG  P    +  + S  L  L+
Sbjct: 725 ---NLSQTNIE-EFPSNLHLKNLVKFSISKEESDVKQWEGEKPLTPFLAMMLSPTLTSLH 780

Query: 760 LSK-NSFVSLPTSITHLSKLLNIELEDCKRLQSLP 793
           L    S V LP+S  +L++L  + +  C  L++LP
Sbjct: 781 LENLPSLVELPSSFQNLNQLKRLFIVRCINLETLP 815


>gi|240256009|ref|NP_193685.6| P-loop NTPase and Toll/interleukin-1 receptor (TIR) homology domain
            protein [Arabidopsis thaliana]
 gi|332658790|gb|AEE84190.1| P-loop NTPase and Toll/interleukin-1 receptor (TIR) homology domain
            protein [Arabidopsis thaliana]
          Length = 1309

 Score =  322 bits (826), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 211/589 (35%), Positives = 324/589 (55%), Gaps = 50/589 (8%)

Query: 8    LRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVS 67
            L  L  S S+DV ++GI G+ G+GKT+IAR +++L +  ++   FL +   +        
Sbjct: 749  LALLNHSQSTDVEIMGIWGIAGIGKTSIAREIFELHAPHYDFCYFLQDFHLMCQMKRPRQ 808

Query: 68   LQRQLLSQLLK----LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNR 123
            L+   +S+L      L  + +   F     +     +K +LLV+DDV + +  +++ G  
Sbjct: 809  LREDFISKLFGEEKGLGASDVKPSF-----MRDWFHKKTILLVLDDVSNARDAEAVIGGF 863

Query: 124  EWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLS 183
             WF  G RII+TSR + +L    V + Y+   L+  E+ +L         Q L     + 
Sbjct: 864  GWFSHGHRIILTSRSKQVLVQCKVKKPYEIQKLSDFESFRL-------CKQYLDGENPVI 916

Query: 184  ARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEK 243
            + +I  + G+PLAL++L S +S + +   +  L+ L  +PP++I +  + SFDGL E EK
Sbjct: 917  SELISCSSGIPLALKLLVSSVSKQYITNMKDHLQSLRKDPPTQIQEAFRRSFDGLDENEK 976

Query: 244  KIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQ 303
             IFLD+ACFF+G  +DY    L+ CGF   +GI  LI++ LI++ +N + M    Q++G+
Sbjct: 977  NIFLDLACFFRGQSKDYAVLLLDACGFFTYMGICELIDESLISLVDNKIEMPIPFQDMGR 1036

Query: 304  QIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFS 363
             IV  +  E+  +RSRLW  +++  VLT ++GTE +EGI LD      E+    S   F 
Sbjct: 1037 IIVHEED-EDPCERSRLWDSKDIVDVLTNNSGTEAIEGIFLDASDLTCEL----SPTVFG 1091

Query: 364  KMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
            KM NLRLLK         C L LP+GL+ L + L LL W  YPL +LP        +E+ 
Sbjct: 1092 KMYNLRLLKFYCSTSGNQCKLTLPHGLDTLPDELSLLHWENYPLVYLPQKFNPVNLVELN 1151

Query: 416  MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
            M YS + +LW+G K+L+KLK + LSHS  L  +   + A NLE + LEGCT L ++  S+
Sbjct: 1152 MPYSNMEKLWEGKKNLEKLKNIKLSHSRELTDILMLSEALNLEHIDLEGCTSLIDVSMSI 1211

Query: 476  LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
                KL+ LNMKDC+ L +LP  + + +L+ LNL       SG                E
Sbjct: 1212 PCCGKLVSLNMKDCSRLRSLPSMVDLTTLKLLNL-------SGCS--------------E 1250

Query: 536  FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
            F +I +   +L E++L GT+IR LPLSI  L+ LV L+L+NC  L+ +P
Sbjct: 1251 FEDIQDFAPNLEEIYLAGTSIRELPLSIRNLTELVTLDLENCERLQEMP 1299



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 116/220 (52%), Gaps = 5/220 (2%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +++  E +  ++   S   RM+GI G  G+GKTTIA+ ++  +S +F    F+   R   
Sbjct: 186 IEAHLEAMSSILRLKSEKARMVGISGPSGIGKTTIAKALFSKLSPQFHLRAFVTYKRTNQ 245

Query: 61  SKGGL-VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
               + +    + LS++L   D  + +    +  +   L  KKVL+++DDV D++ L++L
Sbjct: 246 DDYDMKLCWIEKFLSEILGQKDLKVLD----LGAVEQSLMHKKVLIILDDVDDLELLKTL 301

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G   WFG GSRI++ ++D  LLK H ++ +Y+    +   AL++F   AF    P  + 
Sbjct: 302 VGQTGWFGFGSRIVVITQDRQLLKAHDINLIYEVAFPSAHLALEIFCQSAFGKIYPPSDF 361

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERL 219
            +LS      AG LPL L VLG  + G+  +EW   L RL
Sbjct: 362 RELSVEFAYLAGNLPLDLRVLGLAMKGKHREEWIEMLPRL 401



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/170 (36%), Positives = 92/170 (54%), Gaps = 9/170 (5%)

Query: 492  LITLPGKILMKSLEKLNL--KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHME--HLS 547
            L+ LP K    +L +LN+   ++     G K L  L        RE  +I+   E  +L 
Sbjct: 1135 LVYLPQKFNPVNLVELNMPYSNMEKLWEGKKNLEKLKNIKLSHSRELTDILMLSEALNLE 1194

Query: 548  ELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKK 606
             + LEG T++  + +SI     LV LN+K+C  L  LP  V +L  L+ L LSGCS+   
Sbjct: 1195 HIDLEGCTSLIDVSMSIPCCGKLVSLNMKDCSRLRSLPSMV-DLTTLKLLNLSGCSE--- 1250

Query: 607  FPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPS 656
            F +I     +L E++L GTSI+E+P SI  LT+L  L+L +C+ L  +PS
Sbjct: 1251 FEDIQDFAPNLEEIYLAGTSIRELPLSIRNLTELVTLDLENCERLQEMPS 1300



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 12/156 (7%)

Query: 650  NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWY---- 705
            N+ +L      L+ LK + LS   +L ++   L +  +LE +D+ G       S      
Sbjct: 1156 NMEKLWEGKKNLEKLKNIKLSHSRELTDIL-MLSEALNLEHIDLEGCTSLIDVSMSIPCC 1214

Query: 706  -SYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLC-SLKELYLSKN 763
               + +N+   S    LPS+  L +L+ LNL+ C+  E     DI +   +L+E+YL+  
Sbjct: 1215 GKLVSLNMKDCSRLRSLPSMVDLTTLKLLNLSGCSEFE-----DIQDFAPNLEEIYLAGT 1269

Query: 764  SFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
            S   LP SI +L++L+ ++LE+C+RLQ +P LP  I
Sbjct: 1270 SIRELPLSIRNLTELVTLDLENCERLQEMPSLPVEI 1305


>gi|110738533|dbj|BAF01192.1| resistence protein - like [Arabidopsis thaliana]
          Length = 924

 Score =  322 bits (826), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 211/589 (35%), Positives = 324/589 (55%), Gaps = 50/589 (8%)

Query: 8   LRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVS 67
           L  L  S S+DV ++GI G+ G+GKT+IAR +++L +  ++   FL +   +        
Sbjct: 364 LALLNHSQSTDVEIMGIWGIAGIGKTSIAREIFELHAPHYDFCYFLQDFHLMCQMKRPRQ 423

Query: 68  LQRQLLSQLLK----LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNR 123
           L+   +S+L      L  + +   F     +     +K +LLV+DDV + +  +++ G  
Sbjct: 424 LREDFISKLFGEEKGLGASDVKPSF-----MRDWFHKKTILLVLDDVSNARDAEAVIGGF 478

Query: 124 EWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLS 183
            WF  G RII+TSR + +L    V + Y+   L+  E+ +L         Q L     + 
Sbjct: 479 GWFSHGHRIILTSRSKQVLVQCKVKKPYEIQKLSDFESFRL-------CKQYLDGENPVI 531

Query: 184 ARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEK 243
           + +I  + G+PLAL++L S +S + +   +  L+ L  +PP++I +  + SFDGL E EK
Sbjct: 532 SELISCSSGIPLALKLLVSSVSKQYITNMKDHLQSLRKDPPTQIQEAFRRSFDGLDENEK 591

Query: 244 KIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQ 303
            IFLD+ACFF+G  +DY    L+ CGF   +GI  LI++ LI++ +N + M    Q++G+
Sbjct: 592 NIFLDLACFFRGQSKDYAVLLLDACGFFTYMGICELIDESLISLVDNKIEMPIPFQDMGR 651

Query: 304 QIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFS 363
            IV  +  E+  +RSRLW  +++  VLT ++GTE +EGI LD      E+    S   F 
Sbjct: 652 IIVHEED-EDPCERSRLWDSKDIVDVLTNNSGTEAIEGIFLDASDLTCEL----SPTVFG 706

Query: 364 KMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
           KM NLRLLK         C L LP+GL+ L + L LL W  YPL +LP        +E+ 
Sbjct: 707 KMYNLRLLKFYCSTSGNQCKLTLPHGLDTLPDELSLLHWENYPLVYLPQKFNPVNLVELN 766

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           M YS + +LW+G K+L+KLK + LSHS  L  +   + A NLE + LEGCT L ++  S+
Sbjct: 767 MPYSNMEKLWEGKKNLEKLKNIKLSHSRELTDILMLSEALNLEHIDLEGCTSLIDVSMSI 826

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
               KL+ LNMKDC+ L +LP  + + +L+ LNL       SG                E
Sbjct: 827 PCCGKLVSLNMKDCSRLRSLPSMVDLTTLKLLNL-------SGCS--------------E 865

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
           F +I +   +L E++L GT+IR LPLSI  L+ LV L+L+NC  L+ +P
Sbjct: 866 FEDIQDFAPNLEEIYLAGTSIRELPLSIRNLTELVTLDLENCERLQEMP 914



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/170 (36%), Positives = 92/170 (54%), Gaps = 9/170 (5%)

Query: 492 LITLPGKILMKSLEKLNL--KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHME--HLS 547
           L+ LP K    +L +LN+   ++     G K L  L        RE  +I+   E  +L 
Sbjct: 750 LVYLPQKFNPVNLVELNMPYSNMEKLWEGKKNLEKLKNIKLSHSRELTDILMLSEALNLE 809

Query: 548 ELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKK 606
            + LEG T++  + +SI     LV LN+K+C  L  LP  V +L  L+ L LSGCS+   
Sbjct: 810 HIDLEGCTSLIDVSMSIPCCGKLVSLNMKDCSRLRSLPSMV-DLTTLKLLNLSGCSE--- 865

Query: 607 FPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPS 656
           F +I     +L E++L GTSI+E+P SI  LT+L  L+L +C+ L  +PS
Sbjct: 866 FEDIQDFAPNLEEIYLAGTSIRELPLSIRNLTELVTLDLENCERLQEMPS 915



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 12/156 (7%)

Query: 650 NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWY---- 705
           N+ +L      L+ LK + LS   +L ++   L +  +LE +D+ G       S      
Sbjct: 771 NMEKLWEGKKNLEKLKNIKLSHSRELTDIL-MLSEALNLEHIDLEGCTSLIDVSMSIPCC 829

Query: 706 -SYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLC-SLKELYLSKN 763
              + +N+   S    LPS+  L +L+ LNL+ C+  E     DI +   +L+E+YL+  
Sbjct: 830 GKLVSLNMKDCSRLRSLPSMVDLTTLKLLNLSGCSEFE-----DIQDFAPNLEEIYLAGT 884

Query: 764 SFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
           S   LP SI +L++L+ ++LE+C+RLQ +P LP  I
Sbjct: 885 SIRELPLSIRNLTELVTLDLENCERLQEMPSLPVEI 920


>gi|297791265|ref|XP_002863517.1| hypothetical protein ARALYDRAFT_917001 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309352|gb|EFH39776.1| hypothetical protein ARALYDRAFT_917001 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1124

 Score =  322 bits (826), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 238/694 (34%), Positives = 348/694 (50%), Gaps = 58/694 (8%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EKL F   +   + R++GI G+ G+GKTT+A  +Y      F        +R+  +  G 
Sbjct: 16  EKLDF---AHCDETRIVGIVGIPGIGKTTLAMELYKKSRQRFVRCLAFMKIRDKWTDYGA 72

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
             +++  L  LL++ +  I +       L S+L   KV +V+DDV   +Q++ L G+R W
Sbjct: 73  ERVRKMFLEDLLQITN--ISDDEATHSCLESKLLSNKVFVVLDDVSSARQIEVLLGDRNW 130

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY--QP-LQECVQL 182
              GSRI+IT+RD   +     +    P  LN  + L  F+  AF+ +   P + + +++
Sbjct: 131 IKKGSRIVITTRDRAFIAELDPNPYVVPR-LNLGDGLMYFSFYAFEDHVCNPGMGDYLRM 189

Query: 183 SARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELE 242
           S   + YA G PLAL VLG  L G+   +WR   + L   P   I D+L+IS+  L E E
Sbjct: 190 SREFVDYARGNPLALRVLGRDLRGKDEAQWRKRRDTLAKSPNKSIQDLLKISYGELSEQE 249

Query: 243 KKIFLDIACFFKGNDRDYVTNFLEGC---GFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           K +FLDIACFF+  D  Y  + L+      F     I  L  K  I++    + MHDLL 
Sbjct: 250 KDMFLDIACFFRSEDVYYARSLLDSGDTESFRAPREITDLSHKFFISISGGRVEMHDLLH 309

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
               ++    +     ++ RLW E+ +   L     T+ V GI LD     N   +    
Sbjct: 310 TFAMELCSLTACGVNQEKLRLWNEKSIIAALHGEMETKTVRGISLDMSEVPN---MPLDR 366

Query: 360 KAFSKMTNLRLLKI------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
             F+KM NLR LK+            C L  P+GL +    +R L W  +PL+ LPS+  
Sbjct: 367 LVFTKMCNLRYLKLYSSACPLECEGDCKLNFPDGLSFPLKEVRYLDWLKFPLEELPSDFT 426

Query: 408 MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
            +  I++ + YS+I ++WK  K   KLK + L++S  L  +  F+ APNL +L LEGC+ 
Sbjct: 427 PENLIDLKLPYSKIKQVWKVSKDTPKLKWVDLNNSRMLQTLSGFSKAPNLLRLNLEGCSS 486

Query: 468 LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDV 527
           L  +   +     L+ LN++ CT L  LP          +NL SL T I          +
Sbjct: 487 LVCLSEEMRTMESLVFLNLRGCTGLRHLP---------DINLSSLRTLI----------L 527

Query: 528 SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
           SG    +EF  I E++++L   +L+GTAI  LP  I  L  L+LLNLK CR L  LP  +
Sbjct: 528 SGCSNLQEFRLISENLDYL---YLDGTAIEDLPSEIVKLQKLILLNLKECRRLGSLPECI 584

Query: 588 SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP------SSIELLTKLE 641
             LK L+ L LSGCS LK FP +  +M++   L LDGTSI+EVP      +SI  L +  
Sbjct: 585 GKLKSLKELILSGCSNLKSFPNVEENMENFRVLLLDGTSIEEVPKILHGNNSISFLRR-- 642

Query: 642 LLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
            L+LS    +  L S I  L  LK L+L  C KL
Sbjct: 643 -LSLSRNDVISSLGSDISQLYHLKWLDLKYCKKL 675



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 200/433 (46%), Gaps = 68/433 (15%)

Query: 545 HLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           +L  L+LEG +++  L   +  +  LV LNL+ C  L  LP    NL  LR+L LSGCS 
Sbjct: 475 NLLRLNLEGCSSLVCLSEEMRTMESLVFLNLRGCTGLRHLPDI--NLSSLRTLILSGCSN 532

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
           L++F  I    ++L  L+LDGT+I+++PS I  L KL LLNL +C+ L  LP  I  LKS
Sbjct: 533 LQEFRLI---SENLDYLYLDGTAIEDLPSEIVKLQKLILLNLKECRRLGSLPECIGKLKS 589

Query: 664 LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPS 723
           LK L LSGC  L++ P     +E+   L + GT++         +P              
Sbjct: 590 LKELILSGCSNLKSFPNVEENMENFRVLLLDGTSIEE-------VP-------------- 628

Query: 724 LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFV-SLPTSITHLSKLLNIE 782
                           ++ G       ++  L+ L LS+N  + SL + I+ L  L  ++
Sbjct: 629 ---------------KILHGN-----NSISFLRRLSLSRNDVISSLGSDISQLYHLKWLD 668

Query: 783 LEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKL---CKSDSTMIACLDSLKL-LGN 838
           L+ CK+L+ L  LPPN++ +  +GC SL T+   L      +   +M    +  KL    
Sbjct: 669 LKYCKKLRCLSTLPPNLQCLDAHGCISLETVTSPLAFLMPMEDIHSMFIFTNCCKLNDAA 728

Query: 839 KSLAFSMLREYLEAVSNTRQHLSVVV--------PGSEIPEWFMYQNEGSSITVTRPSNL 890
           K+   S +R   + +S+   + S V         PG E+P WF +Q   S +    P + 
Sbjct: 729 KNDIASHIRRKCQLISDDHHNGSFVFRALIGTCYPGYEVPPWFSHQAFDSVVERKLPPH- 787

Query: 891 YNKKKLVGYAICCV--FHVLKNSRGN---NCFGSYPTHQLNCHIGHGIYGIGFR--DKFG 943
           +   K +G A+C +  FH  ++        C   +     +C       G  F   ++  
Sbjct: 788 WCDNKFLGLALCAIVSFHDYRDQNNRLLVKCTCEFENLDASCSRFSVPVGGWFEPGNEPR 847

Query: 944 QAGSDHLWLLYLS 956
              SDH+++ Y+S
Sbjct: 848 TVESDHVFIGYIS 860


>gi|297791257|ref|XP_002863513.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309348|gb|EFH39772.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1327

 Score =  322 bits (826), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 250/721 (34%), Positives = 374/721 (51%), Gaps = 70/721 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +++R E+L+  +D  S++V R++G+ GM G+GKTT+A+ V +   +EF  + FLD+VRE 
Sbjct: 221 IETRLEQLKEKLDFESNEVTRVVGVVGMPGIGKTTLAKKVLEDWGYEFSHTMFLDDVREK 280

Query: 60  SSKGGLVSLQRQLLSQL--LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
           S    + +LQ +LL  L  +K            +  L   + + KVL V+DDV +  Q++
Sbjct: 281 SKYPEIHNLQMELLCGLTNIKYERKEQTETDLLLKFLKVEVSKNKVLFVLDDVSEKSQIE 340

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFK-TYQPL 176
           ++ G  EW   GS+++IT+  + ++K   V+E Y   GL+ ++AL  F   AF  + +P 
Sbjct: 341 NILGESEWLKEGSKVLITTNSKSVVKGM-VNETYLVPGLSDNDALNYFERHAFSVSCEP- 398

Query: 177 QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSE-ILDILQISF 235
              ++L+   + Y+ G PLAL+VLG  L G+    W S L  L   P S  I ++L+I +
Sbjct: 399 -SFMKLAREFVEYSRGNPLALKVLGGELLGKQKSYWESKLGTLAKSPISNTIQNVLRIPY 457

Query: 236 DGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMH 295
           D L    K +FLD+ACFF+  D  +V +FL+      V  I+ L +K LI +    L ++
Sbjct: 458 DDLSLHHKNLFLDVACFFRFEDEYHVRSFLDSSVHENVSEIKDLADKFLINICGGRLEIN 517

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DL+      +  + S E+     RL    E+  VL        V GI LD      E+ L
Sbjct: 518 DLMYTFAMGLESQSSSEDCTSGRRLSNHGEIITVLRNKVEATKVRGIFLDMSEVPKEMKL 577

Query: 356 CASAKAFSKMTNLRLLKI------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLP 403
             S+  F +M +LR LK             CNL  PNGL +   ++R L W  +PLK  P
Sbjct: 578 --SSDTFKEMNDLRYLKFFDSSCPKECEADCNLNFPNGLRFTLEKIRYLHWLKFPLKIFP 635

Query: 404 SNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
            +      I++ + YS++ ++WKG K   KLK + L+HS  L  +   + A NL+ + LE
Sbjct: 636 RSFNPKNLIDLKLPYSQLEQVWKGEKDTSKLKWLDLNHSSKLRTLSGLSLARNLQSMNLE 695

Query: 464 GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLS 523
           GCT+L  +H  L     L+ LN++ CTSL +LP         K+ L SL T I       
Sbjct: 696 GCTKLEAVHHELKNMGSLLFLNLRGCTSLESLP---------KIKLNSLKTLI------- 739

Query: 524 TLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEIL 583
              +SG     EF  I E +E   EL+L+GTAI+GLP  I  L  LVLL LK+C+ L  L
Sbjct: 740 ---LSGCSNVDEFNLISEKLE---ELYLDGTAIKGLPSDIGNLQRLVLLKLKDCKKLLSL 793

Query: 584 PVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPS----------- 632
           P T+ NLK L  L LSGCS L  FPE+ +++K L  L LDGT+IK+V             
Sbjct: 794 PDTIRNLKALEKLILSGCSSLVSFPEVKQNLKHLKTLLLDGTAIKDVHDVVHRLSINQGQ 853

Query: 633 --------------SIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
                          I  L+ ++ L LS   +   LP SI+ L +LK L+L  C +L ++
Sbjct: 854 FSSFTHYDLCEWRHGINGLSSVQRLCLSR-NDFTSLPESIMYLYNLKWLDLKYCKQLTSL 912

Query: 679 P 679
           P
Sbjct: 913 P 913



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 140/441 (31%), Positives = 213/441 (48%), Gaps = 58/441 (13%)

Query: 493  ITLPGKILMKSLEKLNLKSLPTTISGLKC----------LSTLDVSGDLKFREFPEIVEH 542
            +  P KI  +S    NL  L    S L+           L  LD++   K R    +   
Sbjct: 627  LKFPLKIFPRSFNPKNLIDLKLPYSQLEQVWKGEKDTSKLKWLDLNHSSKLRTLSGL-SL 685

Query: 543  MEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
              +L  ++LEG T +  +   ++ +  L+ LNL+ C SLE LP     L  L++L LSGC
Sbjct: 686  ARNLQSMNLEGCTKLEAVHHELKNMGSLLFLNLRGCTSLESLPKI--KLNSLKTLILSGC 743

Query: 602  SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
            S + +F  I    + L EL+LDGT+IK +PS I  L +L LL L DCK L+ LP +I  L
Sbjct: 744  SNVDEFNLI---SEKLEELYLDGTAIKGLPSDIGNLQRLVLLKLKDCKKLLSLPDTIRNL 800

Query: 662  KSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKL 721
            K+L+ L LSGC  L + PE    ++ L+ L + GTA+         + IN  + S     
Sbjct: 801  KALEKLILSGCSSLVSFPEVKQNLKHLKTLLLDGTAIKDVHDVVHRLSINQGQFS----- 855

Query: 722  PSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNI 781
                   S    +L  C    G     I  L S++ L LS+N F SLP SI +L  L  +
Sbjct: 856  -------SFTHYDL--CEWRHG-----INGLSSVQRLCLSRNDFTSLPESIMYLYNLKWL 901

Query: 782  ELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGN--- 838
            +L+ CK+L SLP LPPN+  +  +GC SL  + ++L L  + +     L S  +  N   
Sbjct: 902  DLKYCKQLTSLPMLPPNLHWLDADGCISLKNIENSLSLLLAATEQ---LHSTFIFSNCKK 958

Query: 839  -----KSLAFSMLREYLEAVSNTRQH----------LSVVVPGSEIPEWFMYQNEGSSIT 883
                 K+   S +R  ++ +S+   H          + +  PG ++P WF +++ GS + 
Sbjct: 959  LDQVAKNDIVSYVRRKIQLMSDALVHKNKGSILDVLIKICYPGWQLPVWFDHRSVGSELK 1018

Query: 884  VTRPSNLYNKKKLVGYAICCV 904
               P + +N+  L G A+C V
Sbjct: 1019 QNLPRH-WNEDGLTGIALCVV 1038


>gi|357513713|ref|XP_003627145.1| NBS resistance protein [Medicago truncatula]
 gi|355521167|gb|AET01621.1| NBS resistance protein [Medicago truncatula]
          Length = 1108

 Score =  322 bits (825), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 237/676 (35%), Positives = 360/676 (53%), Gaps = 40/676 (5%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
           V  IGI GM GLGKTTIAR ++      F++S FL+++ +   + GL  L+ +LL+ LLK
Sbjct: 209 VPRIGIWGMDGLGKTTIARQMFSKHFMHFDSSCFLESISQGLKEFGLPYLRDKLLNDLLK 268

Query: 79  LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
                I + F GI         K+V +V+DDV +  QL  L G        SRIIIT+++
Sbjct: 269 --QKIITSDFHGI-------SGKRVFIVLDDVDNGMQLDYLCGELNDLAPNSRIIITTKN 319

Query: 139 EHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALE 198
              L    VDE+Y+     + E+L+LF + AFK   P     +LS R +  A G+PLAL+
Sbjct: 320 RDTLNGR-VDEIYEVEKWKFKESLELFCLAAFKQKHPKVGYERLSERAVACARGVPLALK 378

Query: 199 VLGSFLSGRSVDEWRSTLERLEIEPPS--EILDILQISFDGLQELEKKIFLDIACFFKGN 256
           VLGS L  R+++ W   L  L+ +  S  EI D+L++S++GL+  EK++FLDIA FFK  
Sbjct: 379 VLGSHLHSRNLEFWEFELNYLDSKGESLCEIQDMLRVSYNGLKAPEKEMFLDIAFFFKDE 438

Query: 257 DRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQELGQQIVQ---RQSPE 312
           ++D+VT+ L+ CGF    GI +L +K LIT+ N N + MHDL Q+L   IVQ    Q   
Sbjct: 439 NKDFVTSILDACGFDATSGIHILKDKALITISNDNKIQMHDLHQKLAFDIVQYKKDQRRR 498

Query: 313 ELGKRSRLWKEEEVCHVLTESTGTE-LVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLL 371
           +  K SRL   EEVC +L  + GT   +EGI  D      +V L      F+ +T LR L
Sbjct: 499 DPRKCSRLRDIEEVCGLLKNNKGTHNKIEGITFD---LTQKVDLHIQDDTFNLITKLRFL 555

Query: 372 KI---------CNLQLPN-GLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRI 421
           ++          NL  P+ G+    ++LR L W GYP K LP     +  +EI + +S +
Sbjct: 556 RLHVPLGKKRLTNLYHPDQGIMPFCDKLRYLEWYGYPSKSLPQPFCAELLVEIRLPHSHV 615

Query: 422 GELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKL 481
             LW GI+ L  L+ + L+  + L+ +PD + A  L+ L L GC  L E+HPS   ++ L
Sbjct: 616 EHLWYGIQELVNLEGIDLTECKQLVELPDLSKATRLKWLFLSGCESLSEVHPSTFHNDTL 675

Query: 482 IILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTIS---GLKCLSTLDVSGDLKFREFPE 538
           + L +  C  L  L  +  + SL+ +++    + I        +  LD+S  +     P 
Sbjct: 676 VTLLLDRCKKLENLVCEKHLTSLKNIDVNGCSSLIEFSLSSDSIEGLDLSNTMVKTLHPS 735

Query: 539 IVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL------EILPVTVSNLKC 592
           I   M + S L+L+G  ++ +P  +  L  L  L + NC  +      EI          
Sbjct: 736 I-GRMSNFSWLNLQGLRLQNVPKELSHLRSLTQLWISNCSVVTKSKLEEIFECHNGLESL 794

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV 652
           L++L L  C  L + P  + S+  L EL LDG+++K +P++I+ L+ L +L+L++CK LV
Sbjct: 795 LKTLVLKDCCNLFELPTNIDSLSFLYELRLDGSNVKMLPTNIKYLSNLTILSLNNCKMLV 854

Query: 653 RLPSSIIALKSLKTLN 668
            LP     +K L+  N
Sbjct: 855 SLPQLPEHIKELRAEN 870



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 145/511 (28%), Positives = 222/511 (43%), Gaps = 78/511 (15%)

Query: 544  EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            E L E+ L  + +  L   I+ L  L  ++L  C+ L  LP  +S    L+ L LSGC  
Sbjct: 603  ELLVEIRLPHSHVEHLWYGIQELVNLEGIDLTECKQLVELP-DLSKATRLKWLFLSGCES 661

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVR---------- 653
            L +          L  L LD     E     + LT L+ ++++ C +L+           
Sbjct: 662  LSEVHPSTFHNDTLVTLLLDRCKKLENLVCEKHLTSLKNIDVNGCSSLIEFSLSSDSIEG 721

Query: 654  ----------LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTS 703
                      L  SI  + +   LNL G  +L+NVP+ L  + SL +L IS  +V     
Sbjct: 722  LDLSNTMVKTLHPSIGRMSNFSWLNLQG-LRLQNVPKELSHLRSLTQLWISNCSV----- 775

Query: 704  WYSYIPINLMRKSVALKLPSLSGLCSLRK-LNLTDC-NLMEGALPSDIGNLCSLKELYLS 761
                    + +  +       +GL SL K L L DC NL E  LP++I +L  L EL L 
Sbjct: 776  --------VTKSKLEEIFECHNGLESLLKTLVLKDCCNLFE--LPTNIDSLSFLYELRLD 825

Query: 762  KNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLV---TLLDALK 818
             ++   LPT+I +LS L  + L +CK L SLPQLP +I+++R   C SLV   TL    K
Sbjct: 826  GSNVKMLPTNIKYLSNLTILSLNNCKMLVSLPQLPEHIKELRAENCTSLVEVSTLKTMSK 885

Query: 819  LCKSDSTMIACLDSLKLLGNKSLAFSMLRE----YLEAVS-------------NTRQHLS 861
                D   I+   + K+L +  L+ + + E     +++V+             ++  + S
Sbjct: 886  HRNGDEKYIS-FKNGKMLESNELSLNRITEDTILVIKSVALYNVLVDKRCSEIHSYNYDS 944

Query: 862  VVV--PGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGS 919
            VVV  PGS IP    Y+   S +T+   S++Y     +   +      +KN R     GS
Sbjct: 945  VVVCLPGSRIPSQLKYKTSDSKLTIGF-SDIYYSLGFIFAVVVSPSSGMKNER-----GS 998

Query: 920  YPTHQLNCHIGHGIYGIGFRDKFGQA-----GSDHLWLLYLSRQTCYDIRLPLESNLEPF 974
                Q  C+   G   +G   ++          DH+++ Y   +    I+   E N+  F
Sbjct: 999  GAKIQCKCYREDG-SQVGVSSEWHNEVITNLDMDHVFVWYDPYRIGI-IQYISEGNV-SF 1055

Query: 975  ESNHVNVSFEPWLGQGLEVKMCGLHPVYMDE 1005
            E N  N S E      L VK CG+ P+Y  E
Sbjct: 1056 EFNVTNDSEEQ--DCFLSVKGCGICPIYTSE 1084


>gi|357519065|ref|XP_003629821.1| Resistance protein [Medicago truncatula]
 gi|355523843|gb|AET04297.1| Resistance protein [Medicago truncatula]
          Length = 780

 Score =  322 bits (825), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 265/712 (37%), Positives = 373/712 (52%), Gaps = 90/712 (12%)

Query: 11  LMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQ 69
           L+D GS+D V MIGI G+GG+GKTT+   VY+LI+  FE   FL+NVRE S K GL  LQ
Sbjct: 9   LLDVGSNDEVSMIGIHGIGGIGKTTLDLAVYNLIADSFEGLCFLENVRENSDKHGLQHLQ 68

Query: 70  RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG 129
           + LLS+ L      + NV  GI ++  RLQ+KKVLL++DDV  ++QL++L G  +W GSG
Sbjct: 69  KILLSETLGEKKIKLTNVKQGISVIKHRLQQKKVLLILDDVDKIEQLEALVGGFDWLGSG 128

Query: 130 SRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRY 189
           SR+IIT+RD+HLL++HGV+  Y+                       LQ       R + Y
Sbjct: 129 SRVIITTRDKHLLESHGVNITYE-----------------------LQ-------RAVAY 158

Query: 190 AGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDI 249
           A GLPLAL V+GS L G++V EW S L R E  P  +I  IL++SFD L+E E+ +FLDI
Sbjct: 159 ASGLPLALIVIGSNLFGKTVQEWESALHRYETIPNKDIQKILKVSFDALEEDEQSVFLDI 218

Query: 250 ACFFKG-NDR-DYVTNFL----EGC-GFHPVIGIRVLIEKCLITVHNNT-LWMHDLLQEL 301
           ACF+ G ND+   V N L    + C  +H    I VL+EK LI + +++ L +H L++++
Sbjct: 219 ACFYGGTNDKLADVENMLHAHYDACMKYH----IGVLVEKSLIKISSHSKLTLHALIEDM 274

Query: 302 GQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKA 361
           G++IV+ +SPEE GKRSRLW  E++  VL E+TGT  ++ I L     E+EV L      
Sbjct: 275 GKEIVRLESPEEPGKRSRLWSHEDIIQVLEENTGTSAIKTIYL---MCEDEVEL--DEMV 329

Query: 362 FSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRI 421
           F KM  L+ L I       G ++L N LR + W  YP ++LP +    K   I +  S +
Sbjct: 330 FKKMKTLKTLTIKGGHFSKGPKHLPNSLRAVEWWRYPSEYLPYDFHPKKPAIIKLPKSCL 389

Query: 422 GELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKL 481
             L    K  D LK++    ++ L  +PD +   NLE    E C +L  IH S+   +KL
Sbjct: 390 TSL----KLTDLLKILNFDDADCLTEIPDVSSLLNLETFSFEYCEKLITIHESVGFLDKL 445

Query: 482 IILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVE 541
            +L+ K C+ L   P  I +KSLE+LNL           C S          + FP+I+ 
Sbjct: 446 KVLSAKGCSKLRRFP-PIKLKSLEQLNLSF---------CKS---------LKNFPQILW 486

Query: 542 HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV---SNLKCLRSLKL 598
             E+++EL LE T I+  P S + L+ L  L L  C +   LP  +    NL  + + K 
Sbjct: 487 KKENITELGLEETPIKEFPCSFQSLTRLQTLQLHYCGTFR-LPNNIFMMPNLVNITAWKS 545

Query: 599 SGCSKLKKFP------EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV 652
            G    K+         IV S  +   L     S    PS +     ++ L+L+   N  
Sbjct: 546 QGWILPKQDEGEQRDISIVSSNVERLHLIFCILSDDFFPSGLTWFRNVKELSLAH-NNFT 604

Query: 653 RLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSW 704
            LP  I     L  LNL  C  L+   E  G + +LE    S     H  SW
Sbjct: 605 ILPECIQECHFLTDLNLDYCQYLQ---EVRGIVPNLEIFSAS-----HCRSW 648



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 147/355 (41%), Gaps = 85/355 (23%)

Query: 592 CLRSLKLSGCSKLKKF--PEIVRSMKDLSELF-LDGTSIK------EVPSSIELLTKLEL 642
           CL SLKL+   K+  F   + +  + D+S L  L+  S +       +  S+  L KL++
Sbjct: 388 CLTSLKLTDLLKILNFDDADCLTEIPDVSSLLNLETFSFEYCEKLITIHESVGFLDKLKV 447

Query: 643 LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHST 702
           L+   C  L R P   I LKSL+ LNLS C  L+N P+ L + E++ EL +  T +    
Sbjct: 448 LSAKGCSKLRRFPP--IKLKSLEQLNLSFCKSLKNFPQILWKKENITELGLEETPIKEFP 505

Query: 703 SWYS----------------YIPINLMR----------KSVALKLP--------SLSGLC 728
             +                  +P N+            KS    LP         +S + 
Sbjct: 506 CSFQSLTRLQTLQLHYCGTFRLPNNIFMMPNLVNITAWKSQGWILPKQDEGEQRDISIVS 565

Query: 729 S-LRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCK 787
           S + +L+L  C L +   PS +    ++KEL L+ N+F  LP  I     L ++ L+ C+
Sbjct: 566 SNVERLHLIFCILSDDFFPSGLTWFRNVKELSLAHNNFTILPECIQECHFLTDLNLDYCQ 625

Query: 788 RLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLR 847
            LQ +  + PN+     + C S               T I  L + +L GN++  F +  
Sbjct: 626 YLQEVRGIVPNLEIFSASHCRSW--------------TCIDMLLNQELHGNRNTMFYL-- 669

Query: 848 EYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
                            PG+ I  WF +++ G SI+      L+ + K    A+C
Sbjct: 670 -----------------PGARILNWFEHRSSGQSIS------LWFRNKFPAIALC 701


>gi|9759605|dbj|BAB11393.1| disease resistance protein RPS4 [Arabidopsis thaliana]
          Length = 1232

 Score =  322 bits (825), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 235/721 (32%), Positives = 360/721 (49%), Gaps = 79/721 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +++R E+L+  ++  S +V R IG+ GM G+GKTT+A+ ++      F    FLD+V + 
Sbjct: 218 IETRVEQLKEKLELKSENVTRFIGVVGMPGIGKTTLAKRLFSECGKHFLHKMFLDDVSQK 277

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDG------IDMLGSRLQRKKVLLVIDDVVDV 113
                  +L   LL  L K  +N      DG      ID + ++LQ KKV +V+D+V D 
Sbjct: 278 PEPFLDETLHTDLLLGLWKSKNNG----RDGNRAKLSIDYIKTQLQGKKVFVVLDNVGDK 333

Query: 114 KQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKT- 172
            Q+  + G  +W  +GSRI+IT+  + +++  G++  Y   GL+  +AL  FN  AF   
Sbjct: 334 SQIDKILGGCDWIKAGSRIVITTSSKSVIQ--GLNSTYLVPGLSSCDALNHFNYHAFSAS 391

Query: 173 ---YQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILD 229
              YQP      L+ + + Y+ G P  L++L   L  +    W+  L  L   P + I D
Sbjct: 392 DGFYQP--SFTDLAKQFVDYSMGHPSVLKLLARELRSKDESYWKEKLSALANSPSNTIQD 449

Query: 230 ILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN 289
           +L+I +D L+E  K +FLDIA FF+  +  YV   L          I  L +K LI +  
Sbjct: 450 VLRIPYDELKEQHKIVFLDIAYFFRFENESYVRRLLGSSAHADASEITDLADKFLIDISG 509

Query: 290 NTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHH 349
           + + M+DLL      +  + S E      RL K  E+  VL        V G+ LD +  
Sbjct: 510 DRVEMNDLLYTFAIGLNSQASSENTTSERRLSKHSEIVDVLMNKAEATKVRGVYLDMFEV 569

Query: 350 ENEVYLCASAKAFSKMTNLRLLKICN-------------LQLPNGLEYLSNRLRLLGWRG 396
           +    +   +  F+KM +LR LK  N             L  P GLE+L   LR L W  
Sbjct: 570 KE---MGLDSDTFNKMDDLRYLKFYNSHCHRECEAEDSKLNFPEGLEFLPQELRYLNWLK 626

Query: 397 YPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPN 456
           YP K LP N      I++ + YS+I ++W+  K    L+ + L+HS  L  +   + A  
Sbjct: 627 YPEKNLPINFDPKNLIDLKLPYSQIEQIWEEEKDTSNLQWLDLNHSSKLHSLSGLSRAQK 686

Query: 457 LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
           L+ + LEGCT L  +   L     L+ LN++ CTSL +LP                  T+
Sbjct: 687 LQSINLEGCTGLKTLPQVLQNMESLMFLNLRGCTSLESLPD----------------ITL 730

Query: 517 SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
            GL+   TL +S   +F+EF  I +++E   EL+L+GTAI+ LP +I  L  L+ L LK+
Sbjct: 731 VGLR---TLILSNCSRFKEFKLIAKNLE---ELYLDGTAIKELPSTIGDLQKLISLKLKD 784

Query: 577 CRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPS---- 632
           C++L  LP ++ NLK ++ + LSGCS L+ FPE+ +++K L  L LDGT+IK++P     
Sbjct: 785 CKNLLSLPDSIGNLKAIQEIILSGCSSLESFPEVNQNLKHLKTLLLDGTAIKKIPELSSV 844

Query: 633 ---------------SIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLEN 677
                          SI  L  L  L+L  CKNLV +P   +   +L+ L+  GC  LE 
Sbjct: 845 RRLSLSSNEFRILPRSIGYLYHLNWLDLKHCKNLVSVP---MLPPNLQWLDAHGCISLET 901

Query: 678 V 678
           +
Sbjct: 902 I 902



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 134/445 (30%), Positives = 202/445 (45%), Gaps = 94/445 (21%)

Query: 544  EHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
            + L  ++LEG T ++ LP  ++ +  L+ LNL+ C SLE LP     L  LR+L LS CS
Sbjct: 685  QKLQSINLEGCTGLKTLPQVLQNMESLMFLNLRGCTSLESLPDIT--LVGLRTLILSNCS 742

Query: 603  KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
            + K+F  I    K+L EL+LDGT+IKE+PS+I  L KL  L L DCKNL+ LP SI  LK
Sbjct: 743  RFKEFKLIA---KNLEELYLDGTAIKELPSTIGDLQKLISLKLKDCKNLLSLPDSIGNLK 799

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
            +++ + LSGC  LE+ PE    ++ L+ L + GTA+         IP     + ++L   
Sbjct: 800  AIQEIILSGCSSLESFPEVNQNLKHLKTLLLDGTAIKK-------IPELSSVRRLSLSSN 852

Query: 723  SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIE 782
                                  LP  IG L  L  L                       +
Sbjct: 853  EFR------------------ILPRSIGYLYHLNWL-----------------------D 871

Query: 783  LEDCKRLQSLPQLPPNIRQVRVNGCASLVT-------LLDALKLCKSDSTMIACLDSLKL 835
            L+ CK L S+P LPPN++ +  +GC SL T       LL   +   S      C    K+
Sbjct: 872  LKHCKNLVSVPMLPPNLQWLDAHGCISLETISILSDPLLAETEHLHSTFIFTNCTKLYKV 931

Query: 836  LGNKSLAFSMLREYLEAVSNTRQH----------LSVVVPGSEIPEWFMYQNEGSSITVT 885
              N   ++   R+ ++ +SN              + +  PG ++P WF ++  G  +   
Sbjct: 932  EENSIESYP--RKKIQLMSNALARYEKGLALDVLIGICFPGWQVPGWFNHRTVGLELKQN 989

Query: 886  RPSNLYNKKKLVGYAICCVF----HVLKNSR-GNNCFGSYPTH-----QLNCHIG----H 931
             P + +N   L G A+C V     ++ KN+R    C G +        Q +C +G    H
Sbjct: 990  LPRH-WNAGGLAGIALCAVVSFKDYISKNNRLLVTCSGEFKKEDKTLFQFSCILGGWTEH 1048

Query: 932  GIYGIGFRDKFGQAGSDHLWLLYLS 956
            G Y      +  +  SDH+++ Y S
Sbjct: 1049 GSY------EAREIKSDHVFIGYTS 1067


>gi|147782877|emb|CAN67859.1| hypothetical protein VITISV_009855 [Vitis vinifera]
          Length = 1383

 Score =  322 bits (825), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 204/530 (38%), Positives = 297/530 (56%), Gaps = 57/530 (10%)

Query: 74  SQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRII 133
           + + K   N I + +DG   L +  +R K              + LA  ++WF + S II
Sbjct: 217 TTIAKAIYNEISDQYDGRSFLRNIKERSK--------------EYLAEEKDWFQAKSTII 262

Query: 134 ITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGL 193
           ITSRD+H+L  +GVD  Y+   LN +EA++LF++ AFK   P +    LS  II YA GL
Sbjct: 263 ITSRDKHVLARYGVDIPYEVSKLNKEEAIELFSLWAFKQNHPKKVYKNLSYNIIDYANGL 322

Query: 194 PLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFF 253
           PLAL+VLG+ L G+ + EW S L +L+I P  EI ++L+ISFDGL +++K +FLD+ACFF
Sbjct: 323 PLALKVLGASLFGKKISEWESALCKLKIIPHMEIHNVLRISFDGLDDIDKGMFLDVACFF 382

Query: 254 KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEE 313
           KG+D+D+V+  L   G H    I  L  +CLIT+  N L MHDL+Q +G ++++++ PE+
Sbjct: 383 KGDDKDFVSRIL---GPHAEHVITTLAYRCLITISKNMLDMHDLIQLMGWEVIRQECPED 439

Query: 314 LGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI 373
            G+RSRLW +    HVL  +TGT  +EG+ LD +          + K+F +M  LRLLKI
Sbjct: 440 PGRRSRLW-DSNAYHVLIGNTGTRAIEGLFLDRW---------LTTKSFKEMNRLRLLKI 489

Query: 374 CNLQ--------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELW 425
            N +        LP   E+ S     L W  YPL+ LP N      +E+ +  S I +LW
Sbjct: 490 HNPRRKLFLEDHLPRDFEFSSYEYTYLHWDRYPLESLPLNFHAKNLVELLLRNSNIKQLW 549

Query: 426 KGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH-NKLIIL 484
           +G K  DKL+V+ LS+S +LIR+PDF+  PNLE L LEG  R     PS + H N L  L
Sbjct: 550 RGSKLHDKLRVIDLSYSVHLIRIPDFSSVPNLEILTLEGSIRDL---PSSITHLNGLQTL 606

Query: 485 NMKDCTSLITLPGKIL-MKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHM 543
            +++C  L  +P  I  + SL++L+L        G+                 P  + H+
Sbjct: 607 LLQECLKLHQIPNHICHLSSLKELDLGHCNIMEGGI-----------------PSDICHL 649

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCL 593
             L +L+LE      +P +I  LS L +LNL +C +LE +P   S L+ L
Sbjct: 650 SSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCNNLEQIPELPSRLRLL 699



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 162/331 (48%), Gaps = 61/331 (18%)

Query: 572  LNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP 631
            L L  C++L  LP  + N K L +L  SGCS+LK FP+I++ M++L  L+LD T+IKE+P
Sbjct: 954  LCLLGCKNLTSLPSGICNFKSLATLCCSGCSQLKSFPDILQDMENLRNLYLDRTAIKEIP 1013

Query: 632  SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
            SSIE L  L+ L L +C NLV LP SI  L SL+ L++  C   + +P+ LG+++SL  L
Sbjct: 1014 SSIERLRGLQHLTLINCINLVNLPDSICNLTSLRKLSVQRCPNFKKLPDNLGRLQSLLHL 1073

Query: 692  DISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGN 751
             +                      S+  +LPSLSGLCSL  L L  CN+ E  +PS+I +
Sbjct: 1074 RVGHL------------------DSMNFQLPSLSGLCSLGTLMLHACNIRE--IPSEIFS 1113

Query: 752  LCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLV 811
            L SL+ L L+ N F  +P  I+ L  L  ++L  CK LQ +P+LP  +R+ ++      V
Sbjct: 1114 LSSLERLCLAGNHFSRIPDGISQLYNLTFLDLSHCKMLQHIPELPSGVRRHKIQR----V 1169

Query: 812  TLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPE 871
              +   K                                      R   + +   + IPE
Sbjct: 1170 IFVQGCKY-------------------------------------RNVTTFIAESNGIPE 1192

Query: 872  WFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
            W  +Q  G  IT+  P + Y     +G  +C
Sbjct: 1193 WISHQKSGFKITMKLPWSWYENDDFLGVVLC 1223



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 103/197 (52%), Gaps = 25/197 (12%)

Query: 508  NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
            NL SLP+ I   K L+TL  SG  + + FP+I++ ME+L  L+L+ TAI+ +P SIE L 
Sbjct: 961  NLTSLPSGICNFKSLATLCCSGCSQLKSFPDILQDMENLRNLYLDRTAIKEIPSSIERLR 1020

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMK------------ 615
            GL  L L NC +L  LP ++ NL  LR L +  C   KK P+ +  ++            
Sbjct: 1021 GLQHLTLINCINLVNLPDSICNLTSLRKLSVQRCPNFKKLPDNLGRLQSLLHLRVGHLDS 1080

Query: 616  ------------DLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
                         L  L L   +I+E+PS I  L+ LE L L+   +  R+P  I  L +
Sbjct: 1081 MNFQLPSLSGLCSLGTLMLHACNIREIPSEIFSLSSLERLCLAG-NHFSRIPDGISQLYN 1139

Query: 664  LKTLNLSGCFKLENVPE 680
            L  L+LS C  L+++PE
Sbjct: 1140 LTFLDLSHCKMLQHIPE 1156



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 147/294 (50%), Gaps = 39/294 (13%)

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
           K+L EL L  ++IK++    +L  KL +++LS   +L+R+P    ++ +L+ L L G   
Sbjct: 533 KNLVELLLRNSNIKQLWRGSKLHDKLRVIDLSYSVHLIRIPD-FSSVPNLEILTLEG--S 589

Query: 675 LENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVAL-KLPS-LSGLCSLRK 732
           + ++P ++  +  L+ L                    L+++ + L ++P+ +  L SL++
Sbjct: 590 IRDLPSSITHLNGLQTL--------------------LLQECLKLHQIPNHICHLSSLKE 629

Query: 733 LNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSL 792
           L+L  CN+MEG +PSDI +L SL++L L +  F S+PT+I  LS+L  + L  C  L+ +
Sbjct: 630 LDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCNNLEQI 689

Query: 793 PQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEA 852
           P+LP  +R +  +G     +    L L     +++ C    +   +K  +FS    + + 
Sbjct: 690 PELPSRLRLLDAHGSNRTSSRAPFLPL----HSLVNCFSWAQ--DSKRTSFSDSFYHGKG 743

Query: 853 VSNTRQHLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
                    + +PG + IP+  M +          P N +   + +G+AI CV+
Sbjct: 744 T-------CIFLPGGDVIPKGIMDRTNRHFERTELPQNWHQNNEFLGFAIFCVY 790



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 130/314 (41%), Gaps = 45/314 (14%)

Query: 443  ENLIRMPD-FTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI-L 500
            +NL  +P       +L  L   GC++L    P +L   + +     D T++  +P  I  
Sbjct: 960  KNLTSLPSGICNFKSLATLCCSGCSQLKSF-PDILQDMENLRNLYLDRTAIKEIPSSIER 1018

Query: 501  MKSLEKL------NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT 554
            ++ L+ L      NL +LP +I  L  L  L V     F++ P+ +  ++ L  LHL   
Sbjct: 1019 LRGLQHLTLINCINLVNLPDSICNLTSLRKLSVQRCPNFKKLPDNLGRLQSL--LHLRVG 1076

Query: 555  AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
             +  +   +  LSGL  L                      +L L  C+ +++ P  + S+
Sbjct: 1077 HLDSMNFQLPSLSGLCSLG---------------------TLMLHACN-IREIPSEIFSL 1114

Query: 615  KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK---NLVRLPSSIIALKSLKTLNLSG 671
              L  L L G     +P  I  L  L  L+LS CK   ++  LPS +   K  + + + G
Sbjct: 1115 SSLERLCLAGNHFSRIPDGISQLYNLTFLDLSHCKMLQHIPELPSGVRRHKIQRVIFVQG 1174

Query: 672  CFKLENVPETLGQIESLEEL---DISGTAVPHST--SWY---SYIPINLMRKSVALKLPS 723
            C K  NV   + +   + E      SG  +      SWY    ++ + L    V L++ +
Sbjct: 1175 C-KYRNVTTFIAESNGIPEWISHQKSGFKITMKLPWSWYENDDFLGVVLCSLIVPLEIET 1233

Query: 724  LSGLCSLRKLNLTD 737
            ++  C + KLN  D
Sbjct: 1234 VTYGCFICKLNFDD 1247



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 23/208 (11%)

Query: 399  LKFLPSNLQ-MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPN 456
            LK  P  LQ M+    +Y+  + I E+   I+ L  L+ + L +  NL+ +PD      +
Sbjct: 986  LKSFPDILQDMENLRNLYLDRTAIKEIPSSIERLRGLQHLTLINCINLVNLPDSICNLTS 1045

Query: 457  LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
            L KL ++ C              K +  N+    SL+ L     +  L+ +N + LP ++
Sbjct: 1046 LRKLSVQRCPNF-----------KKLPDNLGRLQSLLHL----RVGHLDSMNFQ-LP-SL 1088

Query: 517  SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
            SGL  L TL +      RE P  +  +  L  L L G     +P  I  L  L  L+L +
Sbjct: 1089 SGLCSLGTLMLHA-CNIREIPSEIFSLSSLERLCLAGNHFSRIPDGISQLYNLTFLDLSH 1147

Query: 577  CRSLEI---LPVTVSNLKCLRSLKLSGC 601
            C+ L+    LP  V   K  R + + GC
Sbjct: 1148 CKMLQHIPELPSGVRRHKIQRVIFVQGC 1175


>gi|297791235|ref|XP_002863502.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309337|gb|EFH39761.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1161

 Score =  322 bits (824), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 254/767 (33%), Positives = 376/767 (49%), Gaps = 99/767 (12%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLL- 77
            R+IG+ GM G+GKTT+ + ++DL   +F +  F+D +RE S+  GL SL + LL +LL 
Sbjct: 227 TRIIGVVGMPGIGKTTLLKELFDLWQRKFNSRAFIDQIRENSNDPGLDSLPQMLLGELLP 286

Query: 78  KLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSR 137
            L D  I +  D       +L  ++VL+++DDV   +Q+ +L   R+W   GSRI+I + 
Sbjct: 287 SLKDPEIDDDEDPYRKYKDQLLERRVLVILDDVSKSEQIDALFRRRDWISEGSRIVIATN 346

Query: 138 DEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ---PLQECVQLSARIIRYAGGLP 194
           D  LLK   V + Y    LN+ + + LF+  AF + +   P  +  ++S   + YA G P
Sbjct: 347 DMSLLKGL-VQDTYVVRQLNHQDGMDLFHYHAFNSNRATPPKGDFNKMSEDFVHYAKGHP 405

Query: 195 LALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFK 254
           LAL++LG  L G+    W   L+ L   P   I  +LQ+S++ L   +K  FLDIACF +
Sbjct: 406 LALKILGIELCGKERTTWEEKLKLLAKSPSPYIGSVLQVSYEELSPGQKDAFLDIACF-R 464

Query: 255 GNDRDYVTNFLEGCGF---HPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSP 311
             D DYV + L          +  ++ L +KCLI   +  + MHDLL    +++  + S 
Sbjct: 465 SEDVDYVESLLASSDLGSAEAMNAVKALADKCLINTCDGRVEMHDLLYTFARELDSKAST 524

Query: 312 EELGKRSRLWKEEEVCH-----VLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMT 366
               +  RLW  +E+       VL        V GI LD    + E  L      F  MT
Sbjct: 525 --CSRERRLWHHKELIRGGDVDVLQNKMRAANVRGIFLDLSEVKGETSL--DKDHFKCMT 580

Query: 367 NLRLLKICNLQLP------------NGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
            LR LK  N   P            +GL      +R L W  +PL+ LP++   +  +++
Sbjct: 581 KLRYLKFYNSHCPHKCKTNNKINILDGLMLTLKEVRCLHWLKFPLEKLPNDFYPNNLVDL 640

Query: 415 YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
            + YS I +LW+G K +  LK + L+HS  L  +   + A NL+ L LEGCT L      
Sbjct: 641 KLPYSEIKQLWEGDKDIPVLKWVDLNHSSKLCSLSGLSKAQNLQVLNLEGCTSL------ 694

Query: 475 LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFR 534
                                      KSL  +N KSL           TL +SG   F+
Sbjct: 695 ---------------------------KSLGDVNSKSL----------KTLTLSGCSNFK 717

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
           EFP I E++E    L+L+GTAI  LP ++  L  LV LN+K+C+ L+ +P  V  LK L+
Sbjct: 718 EFPLIPENLE---ALYLDGTAISQLPDNLVNLQRLVSLNMKDCQKLKNIPTFVGELKSLQ 774

Query: 595 SLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRL 654
            L LSGC KLK+F EI +S   L  L LDGTSIK +P     L  ++ L LS   NL  L
Sbjct: 775 KLVLSGCLKLKEFSEINKS--SLKFLLLDGTSIKTMPQ----LPSVQYLCLSRNDNLSYL 828

Query: 655 PSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMR 714
           P+ I  L  L  L+L  C KL ++PE      +L+ LD  G +            +N + 
Sbjct: 829 PAGINQLSQLTRLDLKYCKKLTSIPEL---PPNLQYLDAHGCS-----------SLNTVA 874

Query: 715 KSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLS 761
           K +A  +P++   C+    N T+C+ +E A   +I +    K  +LS
Sbjct: 875 KPLARIMPTVQNRCT---FNFTNCDNLEQAAMDEITSFAQSKCQFLS 918



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 203/464 (43%), Gaps = 88/464 (18%)

Query: 569  LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIK 628
            L +LNL+ C SL+ L     N K L++L LSGCS  K+FP I    ++L  L+LDGT+I 
Sbjct: 683  LQVLNLEGCTSLKSLGDV--NSKSLKTLTLSGCSNFKEFPLIP---ENLEALYLDGTAIS 737

Query: 629  EVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
            +                        LP +++ L+ L +LN+  C KL+N+P  +G+++SL
Sbjct: 738  Q------------------------LPDNLVNLQRLVSLNMKDCQKLKNIPTFVGELKSL 773

Query: 689  EELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGL--CSLRKLNLTDCNLMEGALP 746
            ++L +SG                       LKL   S +   SL+ L      L++G   
Sbjct: 774  QKLVLSG----------------------CLKLKEFSEINKSSLKFL------LLDGTSI 805

Query: 747  SDIGNLCSLKELYLSKNSFVS-LPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVN 805
              +  L S++ L LS+N  +S LP  I  LS+L  ++L+ CK+L S+P+LPPN++ +  +
Sbjct: 806  KTMPQLPSVQYLCLSRNDNLSYLPAGINQLSQLTRLDLKYCKKLTSIPELPPNLQYLDAH 865

Query: 806  GCASLVTLLDAL-------------KLCKSDSTMIACLDSLKLLGNKSLAF-SMLREYLE 851
            GC+SL T+   L                  D+   A +D +         F S  R++  
Sbjct: 866  GCSSLNTVAKPLARIMPTVQNRCTFNFTNCDNLEQAAMDEITSFAQSKCQFLSDARKHYN 925

Query: 852  AVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS 911
               ++    +   PG E+P WF ++  G S+   +    ++ K L G A+C V       
Sbjct: 926  EGFSSEALFTTCFPGCEVPSWFSHEERG-SLMQRKLLPHWHDKSLSGIALCAVVSFPAGQ 984

Query: 912  RGNNCFGSYPTHQLNCHIGHGI-----YGIGFRDKFGQAGSDHLWLLYLSRQTC-YDIRL 965
               + F    T  +       I      G    DK  +  SDH+++ Y+   TC + IR 
Sbjct: 985  TQISSFSVACTFTIKVQEKSWIPFTCQVGSWEGDKEDKIESDHVFIAYI---TCPHTIRC 1041

Query: 966  PLESNLEPFESNHVNVSFEPWLGQG----LEVKMCGLHPVYMDE 1005
              + N +       ++ F    G        V  CGL  VY  +
Sbjct: 1042 LEDENSDKCNFTEASLEFNVTGGTSEIGKFTVLRCGLSLVYAKD 1085


>gi|227438203|gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1555

 Score =  322 bits (824), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 261/834 (31%), Positives = 419/834 (50%), Gaps = 69/834 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M +  E L  L+D  S++V ++GI GMGG+GKT+IA+ +YD +S  F A  F++N++ +S
Sbjct: 191 MKAHMEGLNHLLDLESNEVVVLGIWGMGGIGKTSIAKCLYDQLSPRFRARCFIENIKSVS 250

Query: 61  SKGG--LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            +    L   Q+++L  +L   D S+W+V  G   +  RL  +KV LV+D V  V Q+ +
Sbjct: 251 KEHDHDLKHFQKEMLCSILS-DDISLWSVEAGCQEIKKRLGHQKVFLVLDGVDKVAQVHA 309

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           LA  + WFG GSRIIIT+RD  LL T GV+ VY+ + LN  +AL++F   AF+   P   
Sbjct: 310 LAKEKHWFGPGSRIIITTRDMGLLNTCGVENVYEVNCLNDKDALKMFKQIAFEGPPPCDG 369

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSV--DEWRSTLERLEIEPPSEILDILQISFD 236
             QLS R  R + GLP A++    FL GR+   + W   L  LE       ++IL+IS++
Sbjct: 370 FEQLSIRATRLSHGLPSAIQAHALFLRGRTAAPEVWEEALTALESSLDENTMEILKISYE 429

Query: 237 GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWMH 295
           GL +  + +FL +AC F G+    + + L G      + IRVL EK LI +  N ++ MH
Sbjct: 430 GLPKPHQNVFLHVACLFNGDTLQRINSLLHGPIPQSSLWIRVLAEKSLIKISTNGSVIMH 489

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTE-STGTELVEGIVLDNYHHENEVY 354
            L++++ +++++  +      R  L   +++C+ LT    G E  E + L    H   + 
Sbjct: 490 KLVEQMAREMIRDDTSL---ARKFLRDPQDICYALTNFRDGGEQTECMSL----HSCNLA 542

Query: 355 LCASAKA--FSKMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
              S KA     M NL+ LK+          LQL      L   LRL  W  +PL+ LPS
Sbjct: 543 CAFSMKASVVGHMHNLKFLKVYKHVDSRESKLQLIPDQHLLPPSLRLFHWDAFPLRTLPS 602

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
           +      +E+ + +S +  LW G   ++ LK + ++ S++L ++PD +G  +LE+L LE 
Sbjct: 603 DADPYFLVELNLRHSDLETLWSGTPMMESLKRLDVTGSKHLKQLPDLSGITSLEELALEH 662

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK-SLPTTISGLKCLS 523
           CTRL  I  S+   + +  L +  C  L +     + K   + ++    P     +  L 
Sbjct: 663 CTRLKGIPESIGKRSSIKKLKLSYCGGLRSALKFFVRKPTMQQHIGLEFPDAKVKMDALI 722

Query: 524 TLDVSGDLKFR---EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL 580
            + + GD+ F    +F    E++   S+  +  T+   L  S  L+S     N     SL
Sbjct: 723 NISIGGDISFEFCSKFRGTAEYVSFNSDQQIPVTSSMNLQQSPWLISECNRFN-----SL 777

Query: 581 EILPVTVSNLKCLRSLKLSGCS-KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTK 639
            I+           S K +G S     FP+      DL EL L   +I+++PS +  + K
Sbjct: 778 SIMRF---------SHKENGESFSFDSFPD----FPDLKELKLVNLNIRKIPSGVHGIHK 824

Query: 640 LELLNLSDC--KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA 697
           LE +   D    +   LP ++++L  LKTL L  CFKL+ +P+ L Q+++L   +     
Sbjct: 825 LEFIEKLDLSGNDFESLPEAMVSLTRLKTLWLRNCFKLKELPK-LTQVQTLTLTNCRN-- 881

Query: 698 VPHSTSWYSYIPINLMRKSVALKLPS-LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLK 756
                          +R  V L   S   G   L +L L +CN +E  L   +     L 
Sbjct: 882 ---------------LRSLVKLSETSEEQGRYCLLELCLENCNNVE-FLSDQLIYFIKLT 925

Query: 757 ELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
            L LS + FV+LP+SI  L+ L+ + L +CK L+S+ +LP +++ +  +GC SL
Sbjct: 926 NLDLSGHEFVALPSSIRDLTSLVTLCLNNCKNLRSVEKLPLSLQFLDAHGCDSL 979



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/107 (42%), Positives = 66/107 (61%)

Query: 96   SRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHG 155
            +R + +KVL V D V D +Q Q +     WF  GSRII+ ++D+ +L+   V+ VY+   
Sbjct: 1087 ARNKHRKVLHVADGVKDSEQGQWIKEYANWFAPGSRIILITQDKSVLEESEVNHVYEVGS 1146

Query: 156  LNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGS 202
            L YDEALQLF+  AF+   P  E  +LS R ++ AG LP+A+ + GS
Sbjct: 1147 LRYDEALQLFSRFAFRQPYPPPEFERLSVRAVQLAGFLPMAIRLFGS 1193


>gi|357446429|ref|XP_003593492.1| Disease resistance-like protein GS4-5 [Medicago truncatula]
 gi|355482540|gb|AES63743.1| Disease resistance-like protein GS4-5 [Medicago truncatula]
          Length = 895

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 247/716 (34%), Positives = 365/716 (50%), Gaps = 101/716 (14%)

Query: 1   MDSRCEKLRFLMDSGSS-DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           M SR  K+  L++  S+ +V+MIGI G+GG+GKTT+AR VY+ I+++FE   FL NVRE 
Sbjct: 205 MQSRVLKVNSLLEVASNYEVKMIGIYGLGGMGKTTLARAVYNFIANQFECVCFLHNVREN 264

Query: 60  SSKGGLVSLQRQLLSQL----LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQ 115
           S+K GL  LQ+  LS+     +KL D+S     +GI ++  RL RKKVLLV+DDV ++KQ
Sbjct: 265 SAKHGLEHLQKDFLSKTVGLDIKLGDSS-----EGIPIIKQRLHRKKVLLVLDDVNELKQ 319

Query: 116 LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP 175
           +Q LAG  +WF  GSR+IIT+RD+HLL +HG++  Y+   LN +EAL+L   KAFK+ Q 
Sbjct: 320 VQVLAGGLDWFSVGSRVIITTRDKHLLSSHGIELTYEIDELNKEEALELLTWKAFKSKQV 379

Query: 176 LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
                 +  R + YA GLPLALEVLGS L G+++ EW S L+R E  P  EI  IL++SF
Sbjct: 380 NSSYEHVLNRAVNYASGLPLALEVLGSNLFGKNIKEWNSLLDRYERIPNKEIQKILKVSF 439

Query: 236 DGLQELEKKIFLDIACFFKGND----RDYVTNFLEGC-GFHPVIGIRVLIEKCLITV--H 288
           D L+E E+ +FLDIAC FKG +     D +++    C  +H    I VL++K L+ +   
Sbjct: 440 DALEEDEQSVFLDIACCFKGYNLKQMEDMLSDHYGQCMKYH----IGVLVKKTLLRICRW 495

Query: 289 NNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTES--------------- 333
           N ++ MHDL++++G++IV+++S  E GKRSRLW  E++   + E+               
Sbjct: 496 NYSVTMHDLIEDMGKEIVRQESVREPGKRSRLWFHEDIFQAIEENSVRQYTYFFLFMFNL 555

Query: 334 -------TGTELVEGIVLDNYHHENEVYLCASAK--------------------AFSKMT 366
                  + T    G  L  Y  +     C +++                     F KM 
Sbjct: 556 DLALLNISATNDHVGDFLPFYDMKISYMKCGTSQIEIIHLDFPLPQAIVEWKGDEFKKMK 615

Query: 367 NLRLLKICNLQLPNGLEYLSNRLRLLGWRG---YPLKFLPSNLQMDKTIEIYMCYSRIGE 423
           NL+ L +        L +L N L++L W G    P  FLP+NL + K     +   ++  
Sbjct: 616 NLKTLIVKTSSFSKPLVHLPNSLKVLEWHGLKDIPSDFLPNNLSICKLPNSSLTSFKLAN 675

Query: 424 LWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLII 483
             K    L  +KV+ L     L  + D +   NLE+     C  L  IH S+    KL I
Sbjct: 676 SLKERMFLG-MKVLHLDKCYRLTEISDVSSLQNLEEFSFRWCRNLLTIHDSVGCLKKLKI 734

Query: 484 LNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHM 543
           L  + C+                 NLKS P        L  L     LK  +FPEI+  M
Sbjct: 735 LKAEGCS-----------------NLKSFPPIQLTSLELLELSYCYRLK--KFPEILVKM 775

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN--------CRSLEILPVTVSNLKCLRS 595
           E++  + LE T+I  LP S + L G+  L L          C +L ++P        + S
Sbjct: 776 ENIVGIDLEETSIDELPDSFQNLIGIQYLILDGHGIFLRFPCSTL-MMPKQSDKPSSMLS 834

Query: 596 -----LKLSGCSKL-KKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNL 645
                + L+ C+   +  P ++R   +++ L L   +   +P  IE    L +LNL
Sbjct: 835 SNVQVIVLTNCNLTDESLPIVLRWFTNVTYLHLSKNNFTILPECIEEHGSLRILNL 890



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 99/198 (50%), Gaps = 21/198 (10%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
           ++ L L  C +L +  + V S+++L E  F    ++  +  S+  L KL++L    C NL
Sbjct: 685 MKVLHLDKCYRLTEISD-VSSLQNLEEFSFRWCRNLLTIHDSVGCLKKLKILKAEGCSNL 743

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH-STSWYSYIPI 710
              P   I L SL+ L LS C++L+  PE L ++E++  +D+  T++     S+ + I I
Sbjct: 744 KSFPP--IQLTSLELLELSYCYRLKKFPEILVKMENIVGIDLEETSIDELPDSFQNLIGI 801

Query: 711 NLM---RKSVALKLPSLSGL-------------CSLRKLNLTDCNLMEGALPSDIGNLCS 754
             +      + L+ P  + +              +++ + LT+CNL + +LP  +    +
Sbjct: 802 QYLILDGHGIFLRFPCSTLMMPKQSDKPSSMLSSNVQVIVLTNCNLTDESLPIVLRWFTN 861

Query: 755 LKELYLSKNSFVSLPTSI 772
           +  L+LSKN+F  LP  I
Sbjct: 862 VTYLHLSKNNFTILPECI 879


>gi|356558197|ref|XP_003547394.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1122

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 226/636 (35%), Positives = 344/636 (54%), Gaps = 52/636 (8%)

Query: 21  MIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK-- 78
           +IGI GM G GKTT+A  V+  +  E++   FL N RE SS+ G+ SL++++ S LL+  
Sbjct: 288 LIGIWGMAGNGKTTLAEEVFKKLQSEYDGCYFLANEREQSSRHGIDSLKKEIFSGLLENV 347

Query: 79  -LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSR 137
              D+   ++ D    +  R+ R KVL+V+DDV D   L+ L G  + FGSGSRIIIT+R
Sbjct: 348 VTIDDPNVSLID----IDRRIGRMKVLIVLDDVNDPDHLEKLLGTPDNFGSGSRIIITTR 403

Query: 138 DEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLAL 197
              +L  +  +E+Y+    + D+AL+LFN+ AFK      E  +LS +++ YA G PL L
Sbjct: 404 YVQVLNANKANEIYQLGEFSLDKALELFNLIAFKQSDHQWEYNELSKKVVDYAKGNPLVL 463

Query: 198 EVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFF-KGN 256
           +VL   L G+  +EW   L+ L+  PP+++  ++++S+D L   E++IFLD+ACFF + N
Sbjct: 464 KVLAQLLCGKDKEEWEGMLDSLKRMPPADVYKVMKLSYDVLDRKEQQIFLDLACFFLRTN 523

Query: 257 DRDYVTN---FLEGCGFHPVIGIRV--LIEKCLITV-HNNTLWMHDLLQELGQQIVQRQS 310
               V+N    L+G      +  R+  L ++ LIT   +N + MHD LQE+  +IV+R+S
Sbjct: 524 TMVNVSNLKSLLKGNESQETVTFRLGRLKDQALITYSDDNVIAMHDSLQEMAMEIVRRES 583

Query: 311 PEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRL 370
            E+ G RSRLW   ++         T+ +  I++   H    +        F KM  L+ 
Sbjct: 584 SEDPGSRSRLWDPNDIFEASKNDKSTKAIRSILI---HLPTFMKQELGPHIFGKMNRLQF 640

Query: 371 LKI---CNLQ-------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
           L+I   C          L   L++ +N LR L W  YPLK LP N   +K + + +    
Sbjct: 641 LEISGKCEEDSFDEQNILAKWLQFSANELRFLCWYHYPLKSLPENFSAEKLVILKLPKGE 700

Query: 421 IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
           I  LW G+K+L  LK + L+ S+ L  +PD + A NLE L+LEGC+ L  +HPS+    K
Sbjct: 701 IKYLWHGVKNLVNLKELHLTDSKMLEELPDLSNATNLEVLVLEGCSMLTTVHPSIFSLGK 760

Query: 481 LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
           L  LN++DCTSL TL     + SL  LNL          KC          K R+   I 
Sbjct: 761 LEKLNLQDCTSLTTLASNSHLCSLSYLNLD---------KC---------EKLRKLSLIT 802

Query: 541 EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
           E+++   EL L  T ++    +    S L LL L+    ++ LP ++ +L  L  L +S 
Sbjct: 803 ENIK---ELRLRWTKVKAFSFTFGDESKLQLLLLEGS-VIKKLPSSIKDLMQLSHLNVSY 858

Query: 601 CSKLKKFPEIVRSMKDLSELF-LDGTSIKEV--PSS 633
           CSKL++ P++  S+K L   +  D TS+K V  PS+
Sbjct: 859 CSKLQEIPKLPPSLKILDARYSQDCTSLKTVVFPST 894



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 103/421 (24%), Positives = 162/421 (38%), Gaps = 102/421 (24%)

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
            LK  PE   + K L  L L    IK +   ++ L  L+ L+L+D K L  LP  +    +
Sbjct: 679  LKSLPENFSAEK-LVILKLPKGEIKYLWHGVKNLVNLKELHLTDSKMLEELPD-LSNATN 736

Query: 664  LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPS 723
            L+ L L GC  L  V  ++  +  LE+L                   NL   +    L S
Sbjct: 737  LEVLVLEGCSMLTTVHPSIFSLGKLEKL-------------------NLQDCTSLTTLAS 777

Query: 724  LSGLCSLRKLNLTDC-----------NLME--------GALPSDIGNLCSLKELYLSKNS 764
             S LCSL  LNL  C           N+ E         A     G+   L+ L L  + 
Sbjct: 778  NSHLCSLSYLNLDKCEKLRKLSLITENIKELRLRWTKVKAFSFTFGDESKLQLLLLEGSV 837

Query: 765  FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRV---NGCASLVTLL---DALK 818
               LP+SI  L +L ++ +  C +LQ +P+LPP+++ +       C SL T++    A +
Sbjct: 838  IKKLPSSIKDLMQLSHLNVSYCSKLQEIPKLPPSLKILDARYSQDCTSLKTVVFPSTATE 897

Query: 819  LCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSV---------------- 862
              K +   +   + LK L  +SL    L   +  +    + LS                 
Sbjct: 898  QLKENRKEVLFWNCLK-LNQQSLEAIALNAQINVIKFANRCLSAPNHDDVENYNDYDKKY 956

Query: 863  -------VVPGSEIPEWFMYQNEGSSITV---TRPSNLYNKKKLVGYAICCVFHVLKNSR 912
                   V PGS + EW  Y+   + I +   + P +L      VG+  C    +     
Sbjct: 957  HFYQVVYVYPGSSVLEWLEYKTRNNYIIIDMSSAPPSL-----PVGFIFCFALGM----- 1006

Query: 913  GNNCFGSYPTHQLNCHI------------GHGIYGIGFRDKFGQAGSDHLWLLYLSRQTC 960
                +G     ++  +I              G+Y IG R+  G   SDHL ++Y  R + 
Sbjct: 1007 ----YGDTSLERIEANITISDREGEGKKDSVGMY-IGLRN--GTIESDHLCVMYDQRCSA 1059

Query: 961  Y 961
            +
Sbjct: 1060 F 1060


>gi|15238695|ref|NP_197298.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9757889|dbj|BAB08396.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|91806874|gb|ABE66164.1| disease resistance protein [Arabidopsis thaliana]
 gi|332005108|gb|AED92491.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 780

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 219/605 (36%), Positives = 332/605 (54%), Gaps = 49/605 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLIS----HEFEASGFLDNV 56
           +++    L+ ++   S++V+MIG+ G  G+GKTTI R++Y+ +S     +F+   F++NV
Sbjct: 193 LEAHVANLKSMLGLESNEVKMIGVWGPAGIGKTTITRILYNQLSSSNDDDFQLFIFMENV 252

Query: 57  R------EISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDV 110
           +      EI      + L+ + LS++       +      + +   RL+ +K L+V+DDV
Sbjct: 253 KGSYRRKEIDGYSMKLHLRERFLSEITTQRKIKV----SHLGVAQERLKNQKALIVLDDV 308

Query: 111 VDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAF 170
            +++QL++LA   +W G+G+RI++T+ D  LLK HG+  VY+    + DEAL++    AF
Sbjct: 309 DELEQLRALADQTQWVGNGTRILVTTEDRQLLKAHGITHVYEVDYPSRDEALKILCQCAF 368

Query: 171 KTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDI 230
                 +    L+  ++  AG LPL L VLG+ L G S  EW + L RL      +I  +
Sbjct: 369 GKNSAPEGYNDLAVEVVELAGYLPLGLSVLGASLRGMSKKEWINALPRLRTSLNGKIEKL 428

Query: 231 LQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-N 289
           L++ ++GL E +K IFL IAC F G + D V   L         G++VL+++ LI +  +
Sbjct: 429 LRVCYEGLDEKDKAIFLHIACLFNGKNVDRVKLLLAKSALDVEFGLKVLVDRSLIHIDAD 488

Query: 290 NTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHH 349
             + MH LLQ+LG++I + Q  +E GKR  L    E+  VL + TGTE V GI LD    
Sbjct: 489 GYIVMHCLLQQLGKEITRGQCLDEPGKRKFLVDSLEISDVLADETGTETVLGISLDMSEI 548

Query: 350 ENEVYLCASAKAFSKMTNLRLL--------KICNLQLPNGLEYLSNRLRLLGWRGYPLKF 401
           E++VY+  S KAF KM NL+ L        +   L LP+GL+YL  +LRLL W  YP K 
Sbjct: 549 EDQVYV--SEKAFEKMPNLQFLWLYKNFPDEAVKLYLPHGLDYLPRKLRLLHWDSYPKKC 606

Query: 402 LPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLI 461
           LPS  + +  +E+ M  S++ +LW+GI+ L  LK M LS S  +  +P+ + A NLEKL 
Sbjct: 607 LPSKFRPEFLVELTMRDSKLEKLWEGIQPLKSLKRMDLSASTKIKDIPNLSRATNLEKLY 666

Query: 462 LEGCTRLYEIHPSLLLHN--KLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGL 519
           L  C  L  I PS  L N  KL +L+M  C                 + LKSLP  I+ L
Sbjct: 667 LRFCKNLV-IVPSSCLQNLHKLKVLDMSCC-----------------IKLKSLPDNIN-L 707

Query: 520 KCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRS 579
           K LS L++ G  K   FP I   ++ +S   L  TAI  +P  I+L S LV L +  C++
Sbjct: 708 KSLSVLNMRGCSKLNNFPLISTQIQFMS---LGETAIEKVPSVIKLCSRLVSLEMAGCKN 764

Query: 580 LEILP 584
           L+ LP
Sbjct: 765 LKTLP 769



 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 107/216 (49%), Gaps = 16/216 (7%)

Query: 451 FTGAPNLEKLIL-----EGCTRLYEIHPSLLLHNKLIILNM----KDCTSLITLPGKILM 501
           F   PNL+ L L     +   +LY  H    L  KL +L+     K C      P  ++ 
Sbjct: 559 FEKMPNLQFLWLYKNFPDEAVKLYLPHGLDYLPRKLRLLHWDSYPKKCLPSKFRPEFLVE 618

Query: 502 KSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTA-IRGLP 560
            ++    L+ L   I  LK L  +D+S   K ++ P +     +L +L+L     +  +P
Sbjct: 619 LTMRDSKLEKLWEGIQPLKSLKRMDLSASTKIKDIPNL-SRATNLEKLYLRFCKNLVIVP 677

Query: 561 LS-IELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSE 619
            S ++ L  L +L++  C  L+ LP  + NLK L  L + GCSKL  FP I   ++ +S 
Sbjct: 678 SSCLQNLHKLKVLDMSCCIKLKSLPDNI-NLKSLSVLNMRGCSKLNNFPLISTQIQFMS- 735

Query: 620 LFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
             L  T+I++VPS I+L ++L  L ++ CKNL  LP
Sbjct: 736 --LGETAIEKVPSVIKLCSRLVSLEMAGCKNLKTLP 769



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 52/206 (25%)

Query: 602 SKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           SKL+K  E ++ +K L  + L   T IK++P+ +   T LE L L  CKNLV +PSS + 
Sbjct: 624 SKLEKLWEGIQPLKSLKRMDLSASTKIKDIPN-LSRATNLEKLYLRFCKNLVIVPSSCLQ 682

Query: 661 -LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVAL 719
            L  LK L++S C KL+++P+ +                                     
Sbjct: 683 NLHKLKVLDMSCCIKLKSLPDNIN------------------------------------ 706

Query: 720 KLPSLSGLCSLRKLNLTDCNLMEG-ALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
                  L SL  LN+  C+ +    L S      SL E  + K     +P+ I   S+L
Sbjct: 707 -------LKSLSVLNMRGCSKLNNFPLISTQIQFMSLGETAIEK-----VPSVIKLCSRL 754

Query: 779 LNIELEDCKRLQSLPQLPPNIRQVRV 804
           +++E+  CK L++LP LP +I  V +
Sbjct: 755 VSLEMAGCKNLKTLPYLPASIEIVDI 780


>gi|237769815|dbj|BAH59426.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 1217

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 238/698 (34%), Positives = 363/698 (52%), Gaps = 64/698 (9%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
            R+IG+ GM G+GKTT+ + +Y     +F     +D +R  S    L  L + LL +L K
Sbjct: 229 TRIIGVVGMPGIGKTTLLKELYKTWQGKFSRHALIDQIRVKSKHLELDRLPQMLLGELSK 288

Query: 79  LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG---SRIIIT 135
           L +  + N+ D      S+L  +KVL+V+DDV   +Q+ +L    +W   G   SR++I 
Sbjct: 289 LNNPHVDNLKDPY----SQLHERKVLVVLDDVSKREQIDALREILDWIKEGKEGSRVVIA 344

Query: 136 SRDEHLLKTHG-VDEVYKPHGLNYDEALQLFNMKAFKTYQP---LQECVQLSARIIRYAG 191
           + D  L  T+G VD+ Y    LN+ ++LQLF+  AF   Q     ++ ++LS   + YA 
Sbjct: 345 TSDMSL--TNGLVDDTYMVQNLNHRDSLQLFHYHAFIDDQANPQKKDFMKLSEGFVHYAR 402

Query: 192 GLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIAC 251
           G PLAL+VLG  L+ +S+D W S +++L   P   I+ + Q+S+D L   +K  FLDIAC
Sbjct: 403 GHPLALKVLGGELNKKSMDHWNSKMKKLAQSPSPNIVSVFQVSYDELTTAQKDAFLDIAC 462

Query: 252 FFKGNDRDYVTNFLEGCGF---HPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQR 308
           F +  D+DYV + L          +  ++ L +K LI   +  + MHDLL +  ++I  +
Sbjct: 463 F-RSQDKDYVESLLASSDLGSAEAMSAVKSLTDKFLINTCDGRVEMHDLLYKFSREIDLK 521

Query: 309 QSPEELGKRSRLWKEEEVC-----HVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFS 363
            S ++  ++ RLW  + +      +VL        V GI LD    E+E  L      F 
Sbjct: 522 ASNQDGSRQRRLWLHQHIIKGGIINVLQNKMKAANVRGIFLDLSEVEDETSL--DRDHFI 579

Query: 364 KMTNLRLLKICN------------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
            M NLR LK  N            + +P+ L+     +R L W  +PL+ LP++      
Sbjct: 580 NMGNLRYLKFYNSHCPQECKTNNKINIPDKLKLPLKEVRCLHWLKFPLETLPNDFNPINL 639

Query: 412 IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
           +++ + YS + +LW+G K    L+ + L+HS  L  +   + A  L++L LEGCT L   
Sbjct: 640 VDLKLPYSEMEQLWEGDKDTPCLRWVDLNHSSKLCSLSGLSKAEKLQRLNLEGCTTLKAF 699

Query: 472 HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDL 531
              +     L  LN+K CTSL +LP         ++NL S          L TL +SG  
Sbjct: 700 PHDMKKMKMLAFLNLKGCTSLESLP---------EMNLIS----------LKTLTLSGCS 740

Query: 532 KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
            F+EFP I +++E    L+L+GTAI  LP+++E L  LV+LN+K+C+ LE +P  V  LK
Sbjct: 741 TFKEFPLISDNIE---TLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELK 797

Query: 592 CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
            L+ L LS C  LK FPEI  S   L+ L LDGT+I+ +P     L  ++ L LS    +
Sbjct: 798 ALQELILSDCLNLKIFPEIDISF--LNILLLDGTAIEVMPQ----LPSVQYLCLSRNAKI 851

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLE 689
             LP  I  L  LK L+L  C  L +VPE    ++ L+
Sbjct: 852 SCLPVGISQLSQLKWLDLKYCTSLTSVPEFPPNLQCLD 889



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 184/381 (48%), Gaps = 72/381 (18%)

Query: 544  EHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
            E L  L+LEG T ++  P  ++ +  L  LNLK C SLE LP    NL  L++L LSGCS
Sbjct: 683  EKLQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPEM--NLISLKTLTLSGCS 740

Query: 603  KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
              K+FP I     ++  L+LDGT+I ++P ++E L +L +LN+ DCK L  +P  +  LK
Sbjct: 741  TFKEFPLIS---DNIETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELK 797

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
            +L+ L LS C  L+  PE    I  L  L + GTA+                  V  +LP
Sbjct: 798  ALQELILSDCLNLKIFPEI--DISFLNILLLDGTAI-----------------EVMPQLP 838

Query: 723  SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS-LPTSITHLSKLLNI 781
            S+  LC                               LS+N+ +S LP  I+ LS+L  +
Sbjct: 839  SVQYLC-------------------------------LSRNAKISCLPVGISQLSQLKWL 867

Query: 782  ELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLC----KSDSTMI--ACLDSLKL 835
            +L+ C  L S+P+ PPN++ +  +GC+SL T+   L       ++ ST I   C +  + 
Sbjct: 868  DLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTNCENLEQA 927

Query: 836  LGNKSLAFSMLREYLEAVSNTRQH--------LSVVVPGSEIPEWFMYQNEGSSITVTRP 887
               +  +++  +  L + +  R +         S   PG E+P WF ++  GS + V   
Sbjct: 928  AKEEITSYAQRKCQLLSYARKRYNGGLVSESLFSTCFPGCEVPSWFCHETVGSELEVKLL 987

Query: 888  SNLYNKKKLVGYAICCVFHVL 908
             + ++ KKL G A+C V   L
Sbjct: 988  PHWHD-KKLAGIALCAVVSCL 1007


>gi|356532658|ref|XP_003534888.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1072

 Score =  321 bits (822), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 231/686 (33%), Positives = 369/686 (53%), Gaps = 71/686 (10%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLA--DNSIWNVFD 89
           KTT+A  +++ + +E+E   FL N RE S   G++SL++++ S LL+L   D  I+    
Sbjct: 216 KTTLAEEIFNKLQYEYEGCYFLANEREESKNHGIISLKKRIFSGLLRLRYDDVEIYTENS 275

Query: 90  GIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDE 149
             D +  R+   KVL+V+DDV D   L  L G  + FGSGSRI++T+RDE +LK   V +
Sbjct: 276 LPDNILRRIGHMKVLIVLDDVSDSDHLGKLLGTLDNFGSGSRILVTTRDEQVLKAKKVKK 335

Query: 150 VYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSV 209
            Y    L++D+ L+LFN+ AF      +E  +LS R++ YA G+PL ++VL   L G++ 
Sbjct: 336 TYHLTELSFDKTLELFNLNAFNQSDRQKEYYELSLRVVNYAKGIPLVVKVLAGLLHGKNK 395

Query: 210 DEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCG 269
           +EW S L++L+  PP+++ +++++S+DGL   E++IFLD+ACFF  ++       +  C 
Sbjct: 396 EEWESLLDKLKKIPPTKVYEVMKLSYDGLDRKEQQIFLDLACFFLRSNI-----MVNTCE 450

Query: 270 FHPVI-----------GIRVLIEKCLITV-HNNTLWMHDLLQELGQQIVQRQSPEELGKR 317
              ++            +  L +K LIT+  +N + MHD LQE+  +I++R+S    G  
Sbjct: 451 LKSLLKDTESDNSVFYALERLKDKALITISEDNYVSMHDSLQEMAWEIIRRESSIA-GSH 509

Query: 318 SRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQ 377
           SRLW  +++   L     TE +  + +D  + + +     S   F+ M+ L+ LKI    
Sbjct: 510 SRLWDSDDIAEALKNGKNTEDIRSLQIDMRNLKKQK---LSHDIFTNMSKLQFLKISGKY 566

Query: 378 -------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKH 430
                  L  GL++L   LR L W  YPLK LP N    + + +   + R+ +LW G+++
Sbjct: 567 NDDLLNILAEGLQFLETELRFLYWDYYPLKSLPENFIARRLVILEFPFGRMKKLWDGVQN 626

Query: 431 LDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCT 490
           L  LK + L+ S  L  +PD +GA NLE+L L GC+ L  +HPS+    KL  L + +C 
Sbjct: 627 LVNLKKVDLTSSNKLEELPDLSGATNLEELKLGGCSMLTSVHPSIFSLPKLEKLFLINCK 686

Query: 491 SLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELH 550
           SL                  ++ T+ S L  LS L +      REF  I ++M+   EL 
Sbjct: 687 SL------------------TIVTSDSKLCSLSHLYLLFCENLREFSLISDNMK---ELR 725

Query: 551 LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI 610
           L  T +R LP S    S L  L+L+  + +E LP +++NL  L  L +  C +L+  PE+
Sbjct: 726 LGWTNVRALPSSFGYQSKLKSLDLRRSK-IEKLPSSINNLTQLLHLDIRYCRELQTIPEL 784

Query: 611 VRSMKDLSELFLDG---TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL 667
              ++      LD    TS++ +P   EL   L+ LN+ +CK+L+ LP  ++ L  LKTL
Sbjct: 785 PMFLE-----ILDAECCTSLQTLP---ELPRFLKTLNIRECKSLLTLP--VLPL-FLKTL 833

Query: 668 NLSGCFKLENV---PETLGQIESLEE 690
           + S C  L+ V   P T   +E L+E
Sbjct: 834 DASECISLKTVLLSPST--AVEQLKE 857



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 134/280 (47%), Gaps = 33/280 (11%)

Query: 572 LNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK---LKKFPEIVRSMK-DLSELFLDGTSI 627
           ++++N +  ++     +N+  L+ LK+SG      L    E ++ ++ +L  L+ D   +
Sbjct: 536 IDMRNLKKQKLSHDIFTNMSKLQFLKISGKYNDDLLNILAEGLQFLETELRFLYWDYYPL 595

Query: 628 KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
           K +P +  +  +L +L     + + +L   +  L +LK ++L+   KLE +P+  G   +
Sbjct: 596 KSLPENF-IARRLVILEFPFGR-MKKLWDGVQNLVNLKKVDLTSSNKLEELPDLSGAT-N 652

Query: 688 LEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSL------SGLCSLRKLNLTDC-NL 740
           LEEL + G ++  S    S   +  + K   +   SL      S LCSL  L L  C NL
Sbjct: 653 LEELKLGGCSMLTSVH-PSIFSLPKLEKLFLINCKSLTIVTSDSKLCSLSHLYLLFCENL 711

Query: 741 ME------------------GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIE 782
            E                   ALPS  G    LK L L ++    LP+SI +L++LL+++
Sbjct: 712 REFSLISDNMKELRLGWTNVRALPSSFGYQSKLKSLDLRRSKIEKLPSSINNLTQLLHLD 771

Query: 783 LEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKS 822
           +  C+ LQ++P+LP  +  +    C SL TL +  +  K+
Sbjct: 772 IRYCRELQTIPELPMFLEILDAECCTSLQTLPELPRFLKT 811



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 144/565 (25%), Positives = 241/565 (42%), Gaps = 87/565 (15%)

Query: 485  NMKDCTSLITLPGKILMKSLEKLNLK-SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHM 543
            N +D  SL     +I M++L+K  L   + T +S L+ L       D       E ++ +
Sbjct: 527  NTEDIRSL-----QIDMRNLKKQKLSHDIFTNMSKLQFLKISGKYNDDLLNILAEGLQFL 581

Query: 544  E-HLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
            E  L  L+ +   ++ LP +  +   LV+L     R ++ L   V NL  L+ + L+  +
Sbjct: 582  ETELRFLYWDYYPLKSLPENF-IARRLVILEFPFGR-MKKLWDGVQNLVNLKKVDLTSSN 639

Query: 603  KLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
            KL++ P++     +L EL L G S +  V  SI  L KLE L L +CK+L  + +S   L
Sbjct: 640  KLEELPDL-SGATNLEELKLGGCSMLTSVHPSIFSLPKLEKLFLINCKSLT-IVTSDSKL 697

Query: 662  KSLKTLNLSGCFKLENVPETLGQIESLEELDISGT---AVPHSTSWYSYIPINLMRKSVA 718
             SL  L L  C   EN+ E     ++++EL +  T   A+P S  + S +    +R+S  
Sbjct: 698  CSLSHLYLLFC---ENLREFSLISDNMKELRLGWTNVRALPSSFGYQSKLKSLDLRRSKI 754

Query: 719  LKLPS-LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK--NSFVSLPTSITHL 775
             KLPS ++ L  L  L++  C  ++      I  L    E+  ++   S  +LP  +   
Sbjct: 755  EKLPSSINNLTQLLHLDIRYCRELQT-----IPELPMFLEILDAECCTSLQTLP-ELPRF 808

Query: 776  SKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLL----DALKLCKSDSTMI---A 828
             K LNI   +CK L +LP LP  ++ +  + C SL T+L     A++  K +S  I    
Sbjct: 809  LKTLNIR--ECKSLLTLPVLPLFLKTLDASECISLKTVLLSPSTAVEQLKENSKRILFWN 866

Query: 829  CLD----SLKLLGNKSLAFSM--------------LREYLEAVSNTRQHLSVVV-PGSEI 869
            CL+    SL  +G  +    M              +  Y +   N   + +V   P S +
Sbjct: 867  CLNLNIYSLAAIGQNAQTNVMKFAGQHLSTPNHHHVENYSDYKDNYGSYQAVYAYPASNV 926

Query: 870  PEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFH-------------VLKNSRGNNC 916
            P W  Y+     I +   S       L+G+    VF               + + +G   
Sbjct: 927  PPWLEYKTRNDYIIIDLSSA--PPSPLLGFIFGFVFGESTDMNERREVNITISDVKGK-- 982

Query: 917  FGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFES 976
             G   T+++  +I +GI         G+  SD + ++Y   Q C D    L+   E   S
Sbjct: 983  -GKRETNRVRMYIDYGI---------GKIISDQVCVIY--DQRCSDF---LKRRAENQTS 1027

Query: 977  NHVNVSFEPWLGQGLEVKMCGLHPV 1001
              + V+ +        +K  G+ P+
Sbjct: 1028 FIIQVTIQAQWAVDPGLKEFGVSPI 1052


>gi|356541551|ref|XP_003539238.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1028

 Score =  321 bits (822), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 228/625 (36%), Positives = 334/625 (53%), Gaps = 55/625 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++SR  K+ F +      V M+GICG+ G+GKTT+A+ +Y+ IS +FE S FL++VR  S
Sbjct: 196 IESRIPKIIFRLQMTDPTVIMVGICGVSGIGKTTLAQALYNHISPQFEGSCFLNDVRGSS 255

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +K GL  LQ  +LS +    +  + N   GI +L  +L  K+VLL++D+V  ++QL+ LA
Sbjct: 256 AKYGLAYLQEGILSDIAG-ENIKVDNEHKGIPILIRKLHGKRVLLILDNVDKLEQLEYLA 314

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G   WFG GSRIIITSR + +L  HGV+ +Y    L Y EA+QL + K   T  P+ +  
Sbjct: 315 GECNWFGLGSRIIITSRCKDVLAAHGVENIYDVPTLGYYEAVQLLSSKV--TTGPVPDYY 372

Query: 181 Q-LSARIIRYAGGLPLALE-----------VLGSFLSGRSVDEWRSTLERLEIEPPSEIL 228
             +  R +  + GLPL L+           V+GS LS  S+DE    LER E     EI 
Sbjct: 373 NAIWERAVHCSHGLPLVLKDIGSDLSEKMNVIGSDLSWPSIDELGIALERYERVCDGEIQ 432

Query: 229 DILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH 288
            IL++S+D L E EKKIFLDIACFF G    YV   L   GF+P   I  LI++ L+++ 
Sbjct: 433 SILKVSYDSLNECEKKIFLDIACFFIGEPVSYVEEILSAIGFNPQHSINRLIDRSLLSID 492

Query: 289 NN-TLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTE-----------STGT 336
           ++  L MHD ++++  +IVQ+++P    KRSRLW  ++V  VL E           S G+
Sbjct: 493 SSGRLMMHDHIKDMAMKIVQQEAPLHPEKRSRLWCPQDVLQVLNENELVVFNLFLLSKGS 552

Query: 337 ELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRG 396
           + +E ++L +    N+V L  S KAF  M +LR+L I +       ++LSN LR+L W G
Sbjct: 553 DKIEVMMLVDLPRGNDV-LKLSDKAFKNMKSLRMLIIKDAIYSGIPQHLSNSLRVLIWSG 611

Query: 397 YPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPN 456
           YP   LP +     +  + +            K+++ L  M  +  E L  +PD +G P+
Sbjct: 612 YPSGCLPPDFVKVPSDCLIL---------NNFKNMECLTKMDFTDCEFLSEVPDISGIPD 662

Query: 457 LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
           L  L L+ C  L +IH S+     L  L    CTSL  +P    + SL +L+        
Sbjct: 663 LRILYLDNCINLIKIHDSVGFLGNLEELTTIGCTSLKIIPSAFKLASLRELSFS------ 716

Query: 517 SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
              +C         L+   FPEI+  +E+L  L+L  TAI  LP SI  L GL  LNL  
Sbjct: 717 ---EC---------LRLVRFPEILCEIENLKYLNLWQTAIEELPFSIGNLRGLESLNLME 764

Query: 577 CRSLEILPVTVSNLKCLRSLKLSGC 601
           C  L+ LP ++  L  L+ ++   C
Sbjct: 765 CARLDKLPSSIFALPRLQEIQADSC 789



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 206/494 (41%), Gaps = 114/494 (23%)

Query: 589  NLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSD 647
            N++CL  +  + C  L + P+I   + DL  L+LD   ++ ++  S+  L  LE L    
Sbjct: 636  NMECLTKMDFTDCEFLSEVPDI-SGIPDLRILYLDNCINLIKIHDSVGFLGNLEELTTIG 694

Query: 648  CKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSY 707
            C +L  +PS+   L SL+ L+ S C +L   PE L +IE+L+ L++  TA+         
Sbjct: 695  CTSLKIIPSAF-KLASLRELSFSECLRLVRFPEILCEIENLKYLNLWQTAIE-------- 745

Query: 708  IPINLMRKSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFV 766
                        +LP S+  L  L  LNL +C  ++  LPS I  L  L+E+        
Sbjct: 746  ------------ELPFSIGNLRGLESLNLMECARLD-KLPSSIFALPRLQEIQADSCRGF 792

Query: 767  SLPTSITHLSKLLNIELEDCKRLQSLPQL--PPNIRQVRVNGCASLVTLLDALKLCKSDS 824
                        ++IE ED       P+L   PNI  + ++ C +L T            
Sbjct: 793  D-----------ISIECED----HGQPRLSASPNIVHLYLSSC-NLTT-----------E 825

Query: 825  TMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
             ++ CL      G  ++AF            T Q  +V++PG  IPEWF + +   SIT 
Sbjct: 826  HLVICLS-----GFANVAF----------HGTGQK-TVILPGLRIPEWFDHCSSERSIT- 868

Query: 885  TRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGI-GFRDKFG 943
                  + +++     +C  F +L+NS  ++   ++      C + +G   I   R    
Sbjct: 869  -----FWGRERFPRICVCVSFGMLENSLHHHFQVTF------CIVINGHKRILSNRCYDW 917

Query: 944  QAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVYM 1003
               +DH+WL  L+    Y+    L   L   + NHV +  E W         C +     
Sbjct: 918  SVQTDHVWLFDLTALVSYE---DLRGTLVKSDWNHVEIEME-W--------NCCI----- 960

Query: 1004 DEVEELDQTTNQPSRFTV---YNLNEFDQHFVGSKM-IVATTSKRSLTEYFGAEASGSGC 1059
                   Q  + P+R  +   Y ++ + Q    SKM  ++ T+ ++L E   ++  G+  
Sbjct: 961  -------QGDHGPTRMAIVKWYGIHVYRQE---SKMEDISFTNPKNLQENITSKRVGTEV 1010

Query: 1060 CDDEEPQPKRFREL 1073
             D  E   K+ + +
Sbjct: 1011 LDSSEKSQKKLKAI 1024



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 83/155 (53%), Gaps = 3/155 (1%)

Query: 519 LKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNC 577
           ++CL+ +D +      E P+I   +  L  L+L+    +  +  S+  L  L  L    C
Sbjct: 637 MECLTKMDFTDCEFLSEVPDI-SGIPDLRILYLDNCINLIKIHDSVGFLGNLEELTTIGC 695

Query: 578 RSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELL 637
            SL+I+P +   L  LR L  S C +L +FPEI+  +++L  L L  T+I+E+P SI  L
Sbjct: 696 TSLKIIP-SAFKLASLRELSFSECLRLVRFPEILCEIENLKYLNLWQTAIEELPFSIGNL 754

Query: 638 TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC 672
             LE LNL +C  L +LPSSI AL  L+ +    C
Sbjct: 755 RGLESLNLMECARLDKLPSSIFALPRLQEIQADSC 789


>gi|297805930|ref|XP_002870849.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316685|gb|EFH47108.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1225

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 234/723 (32%), Positives = 365/723 (50%), Gaps = 83/723 (11%)

Query: 16   SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI--------SSKGGLVS 67
            S +VRMIGI G  G+GKTTIARV+Y   S  FE S F++N++E+              + 
Sbjct: 432  SDEVRMIGIWGPSGIGKTTIARVLYSQFSENFELSIFMENIKELMYTRPVCSDEYSAKIQ 491

Query: 68   LQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFG 127
            LQ+Q LSQ++   D  +      + +   RL  K+VL+V+D +    QL ++A    WFG
Sbjct: 492  LQQQFLSQIINHKDMEL----PHLGVAQDRLNDKRVLIVLDSIDQSIQLDAIAKETRWFG 547

Query: 128  SGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARII 187
             GSRIIIT++D+ LLK HG++ +YK    +  EA Q+F M AF    P     +L+ ++ 
Sbjct: 548  HGSRIIITTQDQRLLKAHGINHIYKVEFPSAYEAYQIFCMYAFGQNFPKDGFEELAWQVT 607

Query: 188  RYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFL 247
            +  G LPL L V+GS   G S  EW + L RL+I   + I  IL+ S+D L + +K +FL
Sbjct: 608  KLLGNLPLGLRVMGSHFRGMSRHEWVNALPRLKIRLDASIQSILKFSYDALCDEDKDLFL 667

Query: 248  DIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLI-----TVHNNTLWMHDLLQELG 302
             IAC F   +   V ++L         G+ +L EK LI     +     + MH+LL +LG
Sbjct: 668  HIACLFNDEEMVRVEDYLASSFLDVRQGLHLLAEKSLIALKILSADYTRIKMHNLLVQLG 727

Query: 303  QQIVQ----RQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
            + IV+     Q   E GKR  L    ++  VLT++T +  V GI+L+  +   E  L  +
Sbjct: 728  RDIVRHKPGHQCIREPGKRQFLVDARDIREVLTDNTDSRNVIGILLEVRNLSGE--LNIN 785

Query: 359  AKAFSKMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK 410
             +AF  ++NL+ L+           L LP GL  L  +LR+L W  + +K LPSN     
Sbjct: 786  ERAFEGLSNLKFLRFRGLYDGENNKLYLPQGLNNLPQKLRILEWSCFQMKCLPSNFCTKY 845

Query: 411  TIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYE 470
             + I M  S++  LW+G + L  LK M L+ S++L  +P+ + A NLEKL L GC+ L E
Sbjct: 846  LVHIDMWNSKLQNLWQGNQPLGNLKRMYLAESKHLKELPNLSTATNLEKLTLFGCSSLAE 905

Query: 471  IHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGD 530
            +  SL    KL  L+++ C                 LNL++LPT I+ L+ L  LD++  
Sbjct: 906  LPSSLGNLQKLQALSLRGC-----------------LNLEALPTNIN-LESLDYLDLTDC 947

Query: 531  LKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
            L  + FPEI  +++    L+L  TA++ +P +I+  S                       
Sbjct: 948  LLIKSFPEISTNIKR---LYLMKTAVKEVPSTIKSWSH---------------------- 982

Query: 591  KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKN 650
              LR L++S    LK+FP    +   +++L+ +   I+E+P  ++ +++L+ L L  CK 
Sbjct: 983  --LRKLEMSYNDNLKEFPH---AFDIITKLYFNDVKIQEIPLWVKKISRLQTLVLEGCKR 1037

Query: 651  LVRLPSSIIALKSLKTLNLSGC----FKLENVPETLGQIESLEELDISGTAVPHSTSWYS 706
            LV LP    +L  +   N        F   N PE    + +  +L+        + S ++
Sbjct: 1038 LVTLPQLSDSLSQIYVENCESLERLDFSFHNHPERSATLVNCFKLNKEAREFIQTNSTFA 1097

Query: 707  YIP 709
             +P
Sbjct: 1098 LLP 1100



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 144/292 (49%), Gaps = 33/292 (11%)

Query: 602  SKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
            SKL+   +  + + +L  ++L +   +KE+P+ +   T LE L L  C +L  LPSS+  
Sbjct: 854  SKLQNLWQGNQPLGNLKRMYLAESKHLKELPN-LSTATNLEKLTLFGCSSLAELPSSLGN 912

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMR----KS 716
            L+ L+ L+L GC  LE +P  +  +ESL+ LD++   +  S   +  I  N+ R    K+
Sbjct: 913  LQKLQALSLRGCLNLEALPTNIN-LESLDYLDLTDCLLIKS---FPEISTNIKRLYLMKT 968

Query: 717  VALKLPS-LSGLCSLRKLNLT-DCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITH 774
               ++PS +     LRKL ++ + NL E     DI     + +LY +      +P  +  
Sbjct: 969  AVKEVPSTIKSWSHLRKLEMSYNDNLKEFPHAFDI-----ITKLYFNDVKIQEIPLWVKK 1023

Query: 775  LSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL-LDALKLCKSDSTMIACLDSL 833
            +S+L  + LE CKRL +LPQL  ++ Q+ V  C SL  L        +  +T++ C    
Sbjct: 1024 ISRLQTLVLEGCKRLVTLPQLSDSLSQIYVENCESLERLDFSFHNHPERSATLVNC---F 1080

Query: 834  KLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVT 885
            KL  NK       RE+++  S        ++P  E+P  F Y+  GS I V 
Sbjct: 1081 KL--NKE-----AREFIQTNSTF-----ALLPAREVPANFTYRANGSIIMVN 1120


>gi|15239700|ref|NP_199688.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758876|dbj|BAB09430.1| disease resistance protein [Arabidopsis thaliana]
 gi|332008339|gb|AED95722.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1190

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 286/959 (29%), Positives = 457/959 (47%), Gaps = 106/959 (11%)

Query: 1    MDSRCEKLRFLMDSG-SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            M++  E +R L+     ++V M+GI GMGG+GKTTIA+ +Y+ ++ +F A  F+++V +I
Sbjct: 189  MEAHMENIRPLLKKDFDAEVCMVGIWGMGGIGKTTIAKYLYEQLASQFPAHSFIEDVGQI 248

Query: 60   SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
              K  L  +Q+QLL  +L     ++ ++ +G +++ SRL   KVL V+D V  V+QL +L
Sbjct: 249  CKKVDLKCIQQQLLCDILSTKRVALMSIQNGANLIRSRLGTLKVLFVLDGVDKVEQLHAL 308

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP-LQE 178
            A    WFG GSRIIIT+RD  LL +  V   Y+   L  +++L++    AF    P L  
Sbjct: 309  AKEASWFGPGSRIIITTRDRRLLDSCRVTNKYEVKCLQNEDSLKIVKNIAFAGGVPTLDG 368

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGR-SVDEWRSTLERLEIEPPSEILDILQISFDG 237
              + + R  + A GLPLAL   GSFL G  S+DEW   ++ LE  P   I+DIL+ S+  
Sbjct: 369  YERFAIRASQLAQGLPLALVAFGSFLRGATSIDEWEDAIDTLETAPHQNIMDILRSSYTN 428

Query: 238  LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHD 296
            L   +K IF+ +AC F G     V+  L          I+ L EK LI +  +  + +H 
Sbjct: 429  LDLRDKTIFIRVACLFNGEPVSRVSTLLSETKRR----IKGLAEKSLIHISKDGYIDIHS 484

Query: 297  LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
            L++++ ++IV  +S     ++  LW       VL   TGTE ++G+ L    H  E+   
Sbjct: 485  LIKQMAREIVVEESLYIPRQQRILWDPHNSYGVLESKTGTERIQGMTL----HMCELPRA 540

Query: 357  AS--AKAFSKMTNLRLLKI----------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
            AS    AF +M NL  LK            N+   N +  L   LRLL W  YPL  L  
Sbjct: 541  ASIDGSAFEQMENLIFLKFFKHLNDRESKLNINSKNRM-VLPRSLRLLHWDAYPLTTLLP 599

Query: 405  NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
               + + +E+++ YS +  LW G   L +L+++ ++ S+NL ++PD + A  LE+LI +G
Sbjct: 600  TFPLSRLVELHLRYSNLENLWDGKMSLLELRMLDVTGSKNLTKLPDLSRATKLEELIAKG 659

Query: 465  CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKS----------LPT 514
            CTRL +I  ++     L  L++  C  LI L  ++++  L  L  +S           P 
Sbjct: 660  CTRLEQIPETIGSLPSLKKLDVSHCDRLINL--QMIIGELPALQKRSPGLFRQASLSFPD 717

Query: 515  TISGLKCLSTLDVSGDLKF--REFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLL 572
             +  L  L++L + G L F         +H+   SE       ++ +  + +L+S     
Sbjct: 718  AVVTLNSLTSLAIHGKLNFWLSHLRGKADHLCFSSEQWTPNKFLKQVQKTPKLMS----- 772

Query: 573  NLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPS 632
                 +SL+I+             K S   +   F + +     L+EL L   +I+ +P 
Sbjct: 773  EFYGFKSLDIMQFIYR--------KDSASFQCYSFSDFLW----LTELNLINLNIESIPD 820

Query: 633  SIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD 692
             I LL  L+ L+LS   +   LP+ +  L S+K+L L  C KL+ +P    ++  LE L 
Sbjct: 821  DIGLLQVLQKLDLSG-NDFTCLPTDMENLSSMKSLRLCNCLKLQTLP----KLPQLETLK 875

Query: 693  ISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNL 752
            +S   +  S   +S       RK              L +L L +CN +   L     + 
Sbjct: 876  LSNCILLQSPLGHS-----AARKD--------ERGYRLAELWLDNCNDV-FELSYTFSHC 921

Query: 753  CSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVT 812
             +L  L LS N  V++P +I  L  L  + L DCK+L+S+ QLPPN+  +   GC SL  
Sbjct: 922  TNLTYLDLSGNDMVTMPVTIRFLRLLNTLCLNDCKKLKSMVQLPPNLTSLYARGCTSLEI 981

Query: 813  L---LD------ALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVV 863
            +   LD       L  C   + +   +D     G K           E V      LS  
Sbjct: 982  IHLPLDHSIKHVDLSYCPKLNEVANLMDRFLRCGRK-----------EEVPQRFACLS-- 1028

Query: 864  VPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCV------FHVLKNSRGNNC 916
              GS +P +F YQ    S  ++ P  +++  + VG+  C +      +H+  +S   +C
Sbjct: 1029 --GSRVPIYFDYQAREYSREISIPP-IWHASEFVGFDACIIIACQSPYHIKLSSSSYSC 1084


>gi|5823585|emb|CAB53784.1| disease resistance protein rps4-RLD [Arabidopsis thaliana]
          Length = 1217

 Score =  320 bits (820), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 237/698 (33%), Positives = 363/698 (52%), Gaps = 64/698 (9%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
            R+IG+ GM G+GKTT+ + +Y     +F     +D +R  S    L  L + LL +L K
Sbjct: 229 TRIIGVVGMPGIGKTTLLKELYKTWQGKFSRHALIDQIRVKSKHLELDRLPQMLLGELSK 288

Query: 79  LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG---SRIIIT 135
           L +  + N+ D      S+L  +KVL+V+DDV   +Q+ +L    +W   G   SR++I 
Sbjct: 289 LNNPHVDNLKDPY----SQLHERKVLVVLDDVSKREQIDALREILDWIKEGKEGSRVVIA 344

Query: 136 SRDEHLLKTHG-VDEVYKPHGLNYDEALQLFNMKAFKTYQP---LQECVQLSARIIRYAG 191
           + D  L  T+G VD+ Y    LN+ ++LQLF+  AF   Q     ++ ++LS   + YA 
Sbjct: 345 TSDMSL--TNGLVDDTYMVQNLNHRDSLQLFHYHAFIDDQANPQKKDFMKLSEGFVHYAR 402

Query: 192 GLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIAC 251
           G PLAL+VLG  L+ +S+D W S +++L   P   I+ + Q+S+D L   +K  FLDIAC
Sbjct: 403 GHPLALKVLGGELNKKSMDHWNSKMKKLAQSPSPNIVSVFQVSYDELTTAQKDAFLDIAC 462

Query: 252 FFKGNDRDYVTNFLEGCGF---HPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQR 308
           F +  D+DYV + L          +  ++ L +K LI   +  + MHDLL +  +++  +
Sbjct: 463 F-RSQDKDYVESLLASSDLGSAEAMSAVKSLTDKFLINTCDGRVEMHDLLYKFSREVDLK 521

Query: 309 QSPEELGKRSRLWKEEEVC-----HVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFS 363
            S ++  ++ RLW  + +      +VL        V GI LD    E+E  L      F 
Sbjct: 522 ASNQDGSRQRRLWLHQHIIKGGIINVLQNKMKAANVRGIFLDLSEVEDETSL--DRDHFI 579

Query: 364 KMTNLRLLKICN------------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
            M NLR LK  N            + +P+ L+     +R L W  +PL+ LP++      
Sbjct: 580 NMGNLRYLKFYNSHCPQECKTNNKINIPDKLKLPLKEVRCLHWLKFPLETLPNDFNPINL 639

Query: 412 IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
           +++ + YS + +LW+G K    L+ + L+HS  L  +   + A  L++L LEGCT L   
Sbjct: 640 VDLKLPYSEMEQLWEGDKDTPCLRWVDLNHSSKLCSLSGLSKAEKLQRLNLEGCTTLKAF 699

Query: 472 HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDL 531
              +     L  LN+K CTSL +LP         ++NL S          L TL +SG  
Sbjct: 700 PHDMKKMKMLAFLNLKGCTSLESLP---------EMNLIS----------LKTLTLSGCS 740

Query: 532 KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
            F+EFP I +++E    L+L+GTAI  LP+++E L  LV+LN+K+C+ LE +P  V  LK
Sbjct: 741 TFKEFPLISDNIE---TLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELK 797

Query: 592 CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
            L+ L LS C  LK FPEI  S   L+ L LDGT+I+ +P     L  ++ L LS    +
Sbjct: 798 ALQELILSDCLNLKIFPEIDISF--LNILLLDGTAIEVMPQ----LPSVQYLCLSRNAKI 851

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLE 689
             LP  I  L  LK L+L  C  L +VPE    ++ L+
Sbjct: 852 SCLPVGISQLSQLKWLDLKYCTSLTSVPEFPPNLQCLD 889



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 184/381 (48%), Gaps = 72/381 (18%)

Query: 544  EHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
            E L  L+LEG T ++  P  ++ +  L  LNLK C SLE LP    NL  L++L LSGCS
Sbjct: 683  EKLQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPEM--NLISLKTLTLSGCS 740

Query: 603  KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
              K+FP I     ++  L+LDGT+I ++P ++E L +L +LN+ DCK L  +P  +  LK
Sbjct: 741  TFKEFPLI---SDNIETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELK 797

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
            +L+ L LS C  L+  PE    I  L  L + GTA+                  V  +LP
Sbjct: 798  ALQELILSDCLNLKIFPEI--DISFLNILLLDGTAI-----------------EVMPQLP 838

Query: 723  SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS-LPTSITHLSKLLNI 781
            S+  LC                               LS+N+ +S LP  I+ LS+L  +
Sbjct: 839  SVQYLC-------------------------------LSRNAKISCLPVGISQLSQLKWL 867

Query: 782  ELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLC----KSDSTMI--ACLDSLKL 835
            +L+ C  L S+P+ PPN++ +  +GC+SL T+   L       ++ ST I   C +  + 
Sbjct: 868  DLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTNCENLEQA 927

Query: 836  LGNKSLAFSMLREYLEAVSNTRQH--------LSVVVPGSEIPEWFMYQNEGSSITVTRP 887
               +  +++  +  L + +  R +         S   PG E+P WF ++  GS + V   
Sbjct: 928  AKEEITSYAQRKCQLLSYARKRHNGGLVSESLFSTCFPGCEVPSWFCHETVGSELEVKLL 987

Query: 888  SNLYNKKKLVGYAICCVFHVL 908
             + ++ KKL G A+C V   L
Sbjct: 988  PH-WHDKKLAGIALCAVVSCL 1007


>gi|224126763|ref|XP_002329467.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870147|gb|EEF07278.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 514

 Score =  320 bits (820), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 176/334 (52%), Positives = 242/334 (72%), Gaps = 1/334 (0%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DS  + L   +   S+DV M+GI G+GG+GKTT+A+ +Y+ I+++FE S FL NVRE++
Sbjct: 178 LDSHIQDLNCQLRLASNDVCMVGILGIGGIGKTTVAKAIYNEIANQFEGSSFLANVREMA 237

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            +  +V LQ+ LLSQ+L   + S+ N+  GI ++  RL  KKVL+V+DDV +V QL+ LA
Sbjct: 238 KQNKVVELQQTLLSQILGDKNCSVGNIDFGIGVIKDRLCSKKVLIVVDDVDNVDQLKRLA 297

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G  +WFG+GSRIIITSRDEH+L +HGV  V+K   L  D+A QLF++ AF+  QP +E +
Sbjct: 298 GEPDWFGAGSRIIITSRDEHVLVSHGVKFVHKVEELCRDDAFQLFSLHAFRNSQPKEEFM 357

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
             S   + YA GLPLAL VLGSFL GRSV EW S L++L+  P  +I +IL+IS+DGL++
Sbjct: 358 MHSREAVTYAQGLPLALVVLGSFLYGRSVHEWESQLDKLKQIPNKKIYEILKISYDGLED 417

Query: 241 -LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
             +K IFLDIACFF+G D+DYV      C F P+IG++VLIEK LI++ NN L MHDLLQ
Sbjct: 418 GTQKAIFLDIACFFRGMDKDYVMKVFHACNFKPIIGVQVLIEKSLISIENNKLQMHDLLQ 477

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTES 333
            +G+QIVQ++SP   G+RSRLW  E++ HVLTE+
Sbjct: 478 AMGRQIVQQESPNIPGRRSRLWFHEDIVHVLTEN 511


>gi|8843806|dbj|BAA97354.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1152

 Score =  320 bits (820), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 234/664 (35%), Positives = 350/664 (52%), Gaps = 69/664 (10%)

Query: 68  LQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFG 127
           LQ   LS +L   +  I    D +  LG RL+ +KVLL IDD+     L +LAG  +WFG
Sbjct: 169 LQETFLSTILGKQNIKI----DHLGALGERLKHQKVLLFIDDLDQQVVLNALAGQIQWFG 224

Query: 128 SGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARII 187
           SGSRII+ + D+HLL +HG++ +Y+    + + AL++    AF+   P     +L+  ++
Sbjct: 225 SGSRIIVVTNDKHLLISHGIENIYQVCLPSKELALEMLCRYAFRQNTPPDGFKKLAVEVV 284

Query: 188 RYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL-QELEKKIF 246
           R+AG LPL L VLGS+L GR+   W   L RL      +I   L++ +DGL  + ++ IF
Sbjct: 285 RHAGILPLGLNVLGSYLRGRNKRYWMDMLPRLRKGLDGKIQKALRVGYDGLDNKKDEAIF 344

Query: 247 LDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIV 306
             IAC F     + +   L     +  IG+  L++K L+ V +N + MH LLQE+G++IV
Sbjct: 345 RHIACLFNFEKVNDIRLLLADSDLNFNIGLENLVDKSLVNVRSNIVEMHCLLQEMGREIV 404

Query: 307 QRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMT 366
           + QS  E G+R  L   E++C VL ++ GT+ + GI LD    ++E  L    KAF  M 
Sbjct: 405 RAQS-NEAGEREFLMDTEDICDVLDDNIGTKKMLGISLDVDEIDHE--LNVHEKAFQGMR 461

Query: 367 NLRLLKI----------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
           NLR L I            L LP   +YL  +L+LL W  YP++ LPS+ + +  +++ M
Sbjct: 462 NLRFLNIYTKALMSGQKIRLHLPENFDYLPPKLKLLCWDKYPMRCLPSSFRPENLVKLKM 521

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
             S + +LW+G+  L  LK M L  S+NL  +PD + A NL+ L L+ C+ L +I  S+ 
Sbjct: 522 QESELEKLWEGVGSLTCLKDMDLEKSKNLKEIPDLSMATNLKTLNLKYCSSLVKISSSIQ 581

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKS------LPTTISGLKCLSTLDVSGD 530
             NKL  LNM+ CT+L TLP  I +KSL +L+L+        P   + +  L  LD +  
Sbjct: 582 NLNKLTKLNMEGCTNLETLPAGINLKSLHRLDLRGCSRLRMFPDISNNISVL-FLDKTS- 639

Query: 531 LKFREFPEIVEHMEHLSELHL---------EGT--------------------------- 554
               EFP  + H++ L +L +         EG                            
Sbjct: 640 --IEEFPSNL-HLKKLFDLSMQQMNSEKLWEGVQPLTCLMKMLSPPLAKNFNTLYLSDIP 696

Query: 555 AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
           ++  LP  I+ L  L+ L+++ C++LE LP T +N K L  L LSGCSKL+ FP+I  + 
Sbjct: 697 SLVELPCGIQNLKKLMELSIRRCKNLESLP-TGANFKYLDYLDLSGCSKLRSFPDISST- 754

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
             +S L L+ T I+EVPS IE   +L  L + +C  L  +  +I  LK L   + S C  
Sbjct: 755 --ISCLCLNRTGIEEVPSWIENFVRLTYLTMLECNKLKYVSLNIFKLKHLDKADFSDCGT 812

Query: 675 LENV 678
           L  V
Sbjct: 813 LTEV 816



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 128/544 (23%), Positives = 225/544 (41%), Gaps = 94/544 (17%)

Query: 496  PGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLE-GT 554
            P  ++   +++  L+ L   +  L CL  +D+      +E P++     +L  L+L+  +
Sbjct: 513  PENLVKLKMQESELEKLWEGVGSLTCLKDMDLEKSKNLKEIPDL-SMATNLKTLNLKYCS 571

Query: 555  AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
            ++  +  SI+ L+ L  LN++ C +LE LP  + NLK L  L L GCS+L+ FP+I    
Sbjct: 572  SLVKISSSIQNLNKLTKLNMEGCTNLETLPAGI-NLKSLHRLDLRGCSRLRMFPDI---S 627

Query: 615  KDLSELFLDGTSIKEVPSSIELLTKLEL-------------------------------- 642
             ++S LFLD TSI+E PS++ L    +L                                
Sbjct: 628  NNISVLFLDKTSIEEFPSNLHLKKLFDLSMQQMNSEKLWEGVQPLTCLMKMLSPPLAKNF 687

Query: 643  --LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
              L LSD  +LV LP  I  LK L  L++  C  LE++P T    + L+ LD+SG +   
Sbjct: 688  NTLYLSDIPSLVELPCGIQNLKKLMELSIRRCKNLESLP-TGANFKYLDYLDLSGCSKLR 746

Query: 701  STSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
            S                    P +S   S   LN T        +PS I N   L  L +
Sbjct: 747  S-------------------FPDISSTISCLCLNRTGIE----EVPSWIENFVRLTYLTM 783

Query: 761  ---SKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDAL 817
               +K  +VSL  +I  L  L   +  DC  L  +      I        A+   +   L
Sbjct: 784  LECNKLKYVSL--NIFKLKHLDKADFSDCGTLTEVSWCNKTISV----AAATADNIQPKL 837

Query: 818  KLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQN 877
             + ++ S++      ++ +      F + +E L  +       S+++ G E+P +F ++ 
Sbjct: 838  LVSEASSSLCVQKSVVRFIN----CFKLDQEAL--LQQEPVFKSLILGGEEVPAYFNHRA 891

Query: 878  EGSSITVT-RPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGI 936
             G+S+ +   P+++      +G+  C +  V   S            Q++C      +  
Sbjct: 892  TGNSLVIPLVPTSI--SLDFLGFRACALVDVKAMS-----MPGRVDIQVSCR-----FRG 939

Query: 937  GFRDKFGQAGSDHLWLLY--LSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVK 994
              ++ F  A   H  + +   S    +D R  L ++  P    H++++F        ++ 
Sbjct: 940  SLKNHFDSADHSHSLVAFHKASHLLIFDCRFALNNDSNPLNYAHMDITFHLTTDSVSKIN 999

Query: 995  MCGL 998
             CG+
Sbjct: 1000 ACGI 1003


>gi|28558778|gb|AAO45749.1| MRGH63 [Cucumis melo subsp. melo]
          Length = 943

 Score =  320 bits (820), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 237/688 (34%), Positives = 375/688 (54%), Gaps = 50/688 (7%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK-GGLVSLQRQLLS 74
           S+   M+G+ G+GG+GKTT+A+ +Y+ I+ +FE   FL N+RE S++ GGLV LQR+LL 
Sbjct: 208 SNGTTMVGLYGIGGMGKTTLAKALYNKIADDFEGCCFLPNIREASNQYGGLVQLQRELLR 267

Query: 75  QLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIII 134
           ++L      + N+  G+ ++ +RL  KK+LL++DDV   +QLQ+L G  +WFG GS++I 
Sbjct: 268 EILVDDSIKVSNLPRGVTIIRNRLYSKKILLILDDVDTREQLQALVGGHDWFGHGSKVIA 327

Query: 135 TSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLP 194
           T+R++ LL THG D++    GL+YDEAL+LF+   F+   PL + ++LS R + Y  GLP
Sbjct: 328 TTRNKQLLVTHGFDKMQSVVGLDYDEALELFSWHCFRNSHPLNDYLELSKRAVDYCKGLP 387

Query: 195 LALEVLGSFLSGRSVDE---WRSTLERLE-IEPPSEILDILQISFDGLQELEKKIFLDIA 250
           LALEVLGSFL   S+D+   ++  L+  E      EI D L+IS+DGL++  K+IF  I+
Sbjct: 388 LALEVLGSFL--HSIDDPFNFKRILDEYEKYYLDKEIQDSLRISYDGLEDEVKEIFCYIS 445

Query: 251 CFFKGNDRDYVTNFLEGCGFHPV-IGIRVLIEKCLITVHN-NTLWMHDLLQELGQQIVQR 308
           C F   D + V   LE CG   +  GI  L+   L+T+   N + MHD++Q++G+ I   
Sbjct: 446 CCFVREDINKVKMMLEACGCICLEKGITKLMNLSLLTIGRFNRVEMHDIIQQMGRTIHLS 505

Query: 309 QSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNL 368
           ++ +   KR RL  +++  +VL    G +    + +  ++      L   ++AF K+ NL
Sbjct: 506 ETSKS-HKRKRLLIKDDAMNVL---KGNKEARAVKVIKFNFPKPTELDIDSRAFEKVKNL 561

Query: 369 RLLKICNLQLPNG--LEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWK 426
            +L++ N        LEYL + LR + W  +P   LP    M+  +E+ + YS I    +
Sbjct: 562 VVLEVGNATSSKSTTLEYLPSSLRWMNWPQFPFSSLPPTYTMENLVELKLPYSSIKHFGQ 621

Query: 427 GIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNM 486
           G    ++LK + L+ S  L+ +PD + A NL+ L L GC  L ++H S+   NKL+ L++
Sbjct: 622 GYMSCERLKEINLTDSNFLVEIPDLSTAINLKYLDLVGCENLVKVHESIGSLNKLVALHL 681

Query: 487 KDCTS-LITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF-PEIVEHME 544
                     P  + +KSL+ L++K                   + +  E+ P+  E M+
Sbjct: 682 SSSVKGFEQFPSHLKLKSLKFLSMK-------------------NCRIDEWCPQFSEEMK 722

Query: 545 HLSELHLEGTAI-RGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            +  L +  + +   L  +I  L+ L  L L  C+ L  LP T+  L  L SL +   S 
Sbjct: 723 SIEYLSIGYSIVTHQLSPTIGYLTSLKHLTLYYCKELTTLPSTIYRLSNLTSLIVLD-SD 781

Query: 604 LKKFPEIVR-----SMKDLSELFLDG---TSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           L  FP +       S+  L++L L G   T++  + + + +   L+ L+LS+  N  RLP
Sbjct: 782 LSTFPSLNHPSLPSSLFYLTKLRLVGCKITNLDFLETIVYVAPSLKELDLSE-NNFCRLP 840

Query: 656 SSIIALKSLKTLNLSGCFKLE---NVPE 680
           S II  KSLK L    C  LE    VPE
Sbjct: 841 SCIINFKSLKYLYTMDCELLEEISKVPE 868



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 127/288 (44%), Gaps = 15/288 (5%)

Query: 543 MEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
           ME+L EL L  ++I+           L  +NL +   L  +P  +S    L+ L L GC 
Sbjct: 603 MENLVELKLPYSSIKHFGQGYMSCERLKEINLTDSNFLVEIP-DLSTAINLKYLDLVGCE 661

Query: 603 KLKKFPEIVRSMKDLSELFLDGT--SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
            L K  E + S+  L  L L  +    ++ PS ++L   L+ L++ +C+     P     
Sbjct: 662 NLVKVHESIGSLNKLVALHLSSSVKGFEQFPSHLKL-KSLKFLSMKNCRIDEWCPQFSEE 720

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISG----TAVPHSTSWYSYIPINLMRKS 716
           +KS++ L++        +  T+G + SL+ L +      T +P +    S +   ++  S
Sbjct: 721 MKSIEYLSIGYSIVTHQLSPTIGYLTSLKHLTLYYCKELTTLPSTIYRLSNLTSLIVLDS 780

Query: 717 VALKLPSL------SGLCSLRKLNLTDCNLMEGALPSDIGNLC-SLKELYLSKNSFVSLP 769
                PSL      S L  L KL L  C +        I  +  SLKEL LS+N+F  LP
Sbjct: 781 DLSTFPSLNHPSLPSSLFYLTKLRLVGCKITNLDFLETIVYVAPSLKELDLSENNFCRLP 840

Query: 770 TSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDAL 817
           + I +   L  +   DC+ L+ + ++P  +      GC SL    D L
Sbjct: 841 SCIINFKSLKYLYTMDCELLEEISKVPEGVICTSAAGCKSLARFPDNL 888


>gi|5823587|emb|CAB53785.1| disease resistance protein RPS4-Ler [Arabidopsis thaliana]
          Length = 1217

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 237/698 (33%), Positives = 362/698 (51%), Gaps = 64/698 (9%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
            R+IG+ GM G+GKTT+ + +Y     +F     +D +R  S    L  L + LL +L K
Sbjct: 229 TRIIGVVGMPGIGKTTLLKELYKTWQGKFSRHALIDQIRVKSKHLELDRLPQMLLGELSK 288

Query: 79  LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG---SRIIIT 135
           L +  + N+ D      S+L  +KVL+V+DDV   +Q+ +L    +W   G   SR++I 
Sbjct: 289 LNNPHVDNLKDPY----SQLHERKVLVVLDDVSKREQIDALREILDWIKEGKEGSRVVIA 344

Query: 136 SRDEHLLKTHG-VDEVYKPHGLNYDEALQLFNMKAFKTYQP---LQECVQLSARIIRYAG 191
           + D  L  T+G VD+ Y    LN+ ++LQLF+  AF   Q     ++ ++LS   + YA 
Sbjct: 345 TSDMSL--TNGLVDDTYMVQNLNHRDSLQLFHYHAFIDDQANPQKKDFMKLSEGFVHYAR 402

Query: 192 GLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIAC 251
           G PLAL+VLG  L+ +S+D W S +++L   P   I+ + Q+S+D L   +K  FLDIAC
Sbjct: 403 GHPLALKVLGGELNKKSMDHWNSKMKKLAQSPSPNIVSVFQVSYDELTTAQKDAFLDIAC 462

Query: 252 FFKGNDRDYVTNFLEGCGF---HPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQR 308
           F +  D+DYV + L          +  ++ L +K LI   +  + MHDLL +  +++  +
Sbjct: 463 F-RSQDKDYVESLLASSDLGSAEAMSAVKSLTDKFLINTCDGRVEMHDLLYKFSREVDLK 521

Query: 309 QSPEELGKRSRLWKEEEVC-----HVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFS 363
            S ++  ++ RLW  + +      +VL        V GI LD    E+E  L      F 
Sbjct: 522 ASNQDGSRQRRLWLHQHIIKGGIINVLQNKMKAANVRGIFLDLSEVEDETSL--DRDHFI 579

Query: 364 KMTNLRLLKICN------------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
            M NLR LK  N            + +P+ L+     +R L W  +PL+ LP++      
Sbjct: 580 NMGNLRYLKFYNSHCPQECKTNNKINIPDKLKLPLKEVRCLHWLKFPLETLPNDFNPINL 639

Query: 412 IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
           +++ + YS   +LW+G K    L+ + L+HS  L  +   + A  L++L LEGCT L   
Sbjct: 640 VDLKLPYSETEQLWEGDKDTPCLRWVDLNHSSKLCSLSGLSKAEKLQRLNLEGCTTLKAF 699

Query: 472 HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDL 531
              +     L  LN+K CTSL +LP         ++NL S          L TL +SG  
Sbjct: 700 PHDMKKMKMLAFLNLKGCTSLESLP---------EMNLIS----------LKTLTLSGCS 740

Query: 532 KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
            F+EFP I +++E    L+L+GTAI  LP+++E L  LV+LN+K+C+ LE +P  V  LK
Sbjct: 741 TFKEFPLISDNIE---TLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELK 797

Query: 592 CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
            L+ L LS C  LK FPEI  S   L+ L LDGT+I+ +P     L  ++ L LS    +
Sbjct: 798 ALQELILSDCLNLKIFPEIDISF--LNILLLDGTAIEVMPQ----LPSVQYLCLSRNAKI 851

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLE 689
             LP  I  L  LK L+L  C  L +VPE    ++ L+
Sbjct: 852 SCLPVGISQLSQLKWLDLKYCTSLTSVPEFPPNLQCLD 889



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 184/381 (48%), Gaps = 72/381 (18%)

Query: 544  EHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
            E L  L+LEG T ++  P  ++ +  L  LNLK C SLE LP    NL  L++L LSGCS
Sbjct: 683  EKLQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPEM--NLISLKTLTLSGCS 740

Query: 603  KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
              K+FP I     ++  L+LDGT+I ++P ++E L +L +LN+ DCK L  +P  +  LK
Sbjct: 741  TFKEFPLI---SDNIETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELK 797

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
            +L+ L LS C  L+  PE    I  L  L + GTA+                  V  +LP
Sbjct: 798  ALQELILSDCLNLKIFPEI--DISFLNILLLDGTAI-----------------EVMPQLP 838

Query: 723  SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS-LPTSITHLSKLLNI 781
            S+  LC                               LS+N+ +S LP  I+ LS+L  +
Sbjct: 839  SVQYLC-------------------------------LSRNAKISCLPVGISQLSQLKWL 867

Query: 782  ELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLC----KSDSTMI--ACLDSLKL 835
            +L+ C  L S+P+ PPN++ +  +GC+SL T+   L       ++ ST I   C +  + 
Sbjct: 868  DLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTNCENLEQA 927

Query: 836  LGNKSLAFSMLREYLEAVSNTRQH--------LSVVVPGSEIPEWFMYQNEGSSITVTRP 887
               +  +++  +  L + +  R +         S   PG E+P WF ++  GS + V   
Sbjct: 928  AKEEITSYAQRKCQLLSYARKRYNGGLVSESLFSTCFPGCEVPSWFCHETVGSELEVKLL 987

Query: 888  SNLYNKKKLVGYAICCVFHVL 908
             + ++ KKL G A+C V   L
Sbjct: 988  PHWHD-KKLAGIALCAVISCL 1007


>gi|227438157|gb|ACP30568.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1030

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 223/648 (34%), Positives = 340/648 (52%), Gaps = 45/648 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +++  + L+ L+   SS+VR++G+ G  G+GKTTIAR +Y  +S  F+ S F+ N++E  
Sbjct: 188 IEAHIKNLKPLLSLESSEVRIVGVWGPAGIGKTTIARALYTRLSPIFQHSAFMGNIKETY 247

Query: 61  SK------GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
            +      G  + LQ + LS+L+   D  I +      ++  RL+ K+V +V+DDV +++
Sbjct: 248 RRISLDDYGSKLHLQEEFLSKLINHKDVKIPHS----GVVRERLKDKRVFVVLDDVDELE 303

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL +LA    WFGSGSRI++T++D  LLK HG+D VYK    +  EAL++F   AF    
Sbjct: 304 QLIALAKEPRWFGSGSRIVVTTQDRQLLKAHGIDLVYKVELPSRLEALEIFCQSAFGQKH 363

Query: 175 PLQECV---QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDIL 231
           P   CV   +L+ ++   AG LPL L VLGS+L G S +EW   + RL      +I   L
Sbjct: 364 P--PCVGIRELALQVTHLAGYLPLGLTVLGSYLRGFSKEEWEYAIPRLNTSLDGKIXKTL 421

Query: 232 QISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT 291
           + S+D L   +K IFL IAC F G +   V   LE        G++ L +K LI  H   
Sbjct: 422 RFSYDALHSKDKSIFLHIACLFNGKNVXDVKMLLENSNLDVDHGLKALADKSLIDTHWGR 481

Query: 292 LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
           + MH LLQ++G++IV +QS  E GKR  L   EE+  VL   +GT  V GI  D      
Sbjct: 482 IHMHSLLQKMGREIVCQQSVHEPGKRQFLVDAEEIRDVLACKSGTATVLGISFDASKING 541

Query: 352 EVYLCASAKAFSKMTNLRLLKI-------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
           E  L  S KAF  M NL+ L+I         L LP GL YL ++LRLL W  +P++ LPS
Sbjct: 542 E--LSISKKAFKGMHNLQFLEIYKKWNGRSRLNLPQGLNYLPHKLRLLHWDSFPMRSLPS 599

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
               +  +E+ M +S++ +LW+GI  L  LKVM +S+S  L  +P+ + A NL+K   +G
Sbjct: 600 KFSAEFLVELRMRFSKLEKLWEGIIPLRSLKVMDVSYSRKLKEIPNLSNATNLKKFSADG 659

Query: 465 CTRLYEIHPSLLLHNKLIILNMK-DCTSLITLP---------GKILMKSLEKLNLKSLPT 514
           C  L     S   H    I  ++   T +I +P          ++ M    KL   ++  
Sbjct: 660 CESL-----SAFPHVPNCIEELELSYTGIIEVPPWIKNLCGLQRVCMTQCSKLT--NISM 712

Query: 515 TISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSE-LHLEGTAIRG-LP--LSIELLSGLV 570
            +S L+ L  +D SG +    F  IV  +  + + L ++   I   LP  L  +  +  V
Sbjct: 713 NVSKLENLEEVDFSGSVDGILFTAIVSWLSGVKKRLTIKANNIEEMLPKCLPRKAYTSPV 772

Query: 571 LLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLS 618
           LL+L     ++ +P  + +   L  L +  C KL   P++  S+ +L+
Sbjct: 773 LLDLSGNEDIKTIPDCIKHFSQLHKLDVGKCRKLTSLPQLPESLSELN 820



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 156/365 (42%), Gaps = 64/365 (17%)

Query: 536 FPEIVEHMEH-LSELHLEGTAIRGLP--LSIELLSGLVLLNLKNCRSLEILPVTVSNLKC 592
            P+ + ++ H L  LH +   +R LP   S E L  L +   K    LE L   +  L+ 
Sbjct: 573 LPQGLNYLPHKLRLLHWDSFPMRSLPSKFSAEFLVELRMRFSK----LEKLWEGIIPLRS 628

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG----TSIKEVPSSIELLTKLELLNLSDC 648
           L+ + +S   KLK+ P +  +  +L +   DG    ++   VP+ IE   +LEL      
Sbjct: 629 LKVMDVSYSRKLKEIPNLSNAT-NLKKFSADGCESLSAFPHVPNCIE---ELEL----SY 680

Query: 649 KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI 708
             ++ +P  I  L  L+ + ++ C KL N+   + ++E+LEE+D SG+            
Sbjct: 681 TGIIEVPPWIKNLCGLQRVCMTQCSKLTNISMNVSKLENLEEVDFSGSV----------- 729

Query: 709 PINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELY-------LS 761
                     L    +S L  ++K      N +E  LP      C  ++ Y       LS
Sbjct: 730 -------DGILFTAIVSWLSGVKKRLTIKANNIEEMLPK-----CLPRKAYTSPVLLDLS 777

Query: 762 KNSFV-SLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLC 820
            N  + ++P  I H S+L  +++  C++L SLPQLP ++ ++    C SL       ++ 
Sbjct: 778 GNEDIKTIPDCIKHFSQLHKLDVGKCRKLTSLPQLPESLSELNAQECESLE------RIH 831

Query: 821 KSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGS 880
            S      CL       N +    + RE  E +  +    + ++PG E P  F  Q  G 
Sbjct: 832 GSFHNPDICL-------NFANCLKLNREARELICASPSRYT-ILPGEEQPGMFKDQTSGD 883

Query: 881 SITVT 885
            + V 
Sbjct: 884 LLKVV 888


>gi|15242354|ref|NP_199338.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|5459305|emb|CAB50708.1| disease resistance protein RPS4 [Arabidopsis thaliana]
 gi|10176996|dbj|BAB10246.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007838|gb|AED95221.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1217

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 237/698 (33%), Positives = 362/698 (51%), Gaps = 64/698 (9%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
            R+IG+ GM G+GKTT+ + +Y     +F     +D +R  S    L  L + LL +L K
Sbjct: 229 TRIIGVVGMPGIGKTTLLKELYKTWQGKFSRHALIDQIRVKSKHLELDRLPQMLLGELSK 288

Query: 79  LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG---SRIIIT 135
           L    + N+ D      S+L  +KVL+V+DDV   +Q+ +L    +W   G   SR++I 
Sbjct: 289 LNHPHVDNLKDPY----SQLHERKVLVVLDDVSKREQIDALREILDWIKEGKEGSRVVIA 344

Query: 136 SRDEHLLKTHG-VDEVYKPHGLNYDEALQLFNMKAFKTYQP---LQECVQLSARIIRYAG 191
           + D  L  T+G VD+ Y    LN+ ++LQLF+  AF   Q     ++ ++LS   + YA 
Sbjct: 345 TSDMSL--TNGLVDDTYMVQNLNHRDSLQLFHYHAFIDDQANPQKKDFMKLSEGFVHYAR 402

Query: 192 GLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIAC 251
           G PLAL+VLG  L+ +S+D W S +++L   P   I+ + Q+S+D L   +K  FLDIAC
Sbjct: 403 GHPLALKVLGGELNKKSMDHWNSKMKKLAQSPSPNIVSVFQVSYDELTTAQKDAFLDIAC 462

Query: 252 FFKGNDRDYVTNFLEGCGF---HPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQR 308
           F +  D+DYV + L          +  ++ L +K LI   +  + MHDLL +  +++  +
Sbjct: 463 F-RSQDKDYVESLLASSDLGSAEAMSAVKSLTDKFLINTCDGRVEMHDLLYKFSREVDLK 521

Query: 309 QSPEELGKRSRLWKEEEVC-----HVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFS 363
            S ++  ++ RLW  + +      +VL        V GI LD    E+E  L      F 
Sbjct: 522 ASNQDGSRQRRLWLHQHIIKGGIINVLQNKMKAANVRGIFLDLSEVEDETSL--DRDHFI 579

Query: 364 KMTNLRLLKICN------------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
            M NLR LK  N            + +P+ L+     +R L W  +PL+ LP++      
Sbjct: 580 NMGNLRYLKFYNSHCPQECKTNNKINIPDKLKLPLKEVRCLHWLKFPLETLPNDFNPINL 639

Query: 412 IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
           +++ + YS + +LW+G K    L+ + L+HS  L  +   + A  L++L LEGCT L   
Sbjct: 640 VDLKLPYSEMEQLWEGDKDTPCLRWVDLNHSSKLCSLSGLSKAEKLQRLNLEGCTTLKAF 699

Query: 472 HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDL 531
              +     L  LN+K CTSL +LP         ++NL S          L TL +SG  
Sbjct: 700 PHDMKKMKMLAFLNLKGCTSLESLP---------EMNLIS----------LKTLTLSGCS 740

Query: 532 KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
            F+EFP I +++E    L+L+GTAI  LP+++E L  LV+LN+K+C+ LE +P  V  LK
Sbjct: 741 TFKEFPLISDNIE---TLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELK 797

Query: 592 CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
            L+ L LS C  LK FPEI  S   L+ L LDGT+I+ +P     L  ++ L LS    +
Sbjct: 798 ALQELILSDCLNLKIFPEIDISF--LNILLLDGTAIEVMPQ----LPSVQYLCLSRNAKI 851

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLE 689
             LP  I  L  LK L+L  C  L +VPE    ++ L+
Sbjct: 852 SCLPVGISQLSQLKWLDLKYCTSLTSVPEFPPNLQCLD 889



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 184/381 (48%), Gaps = 72/381 (18%)

Query: 544  EHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
            E L  L+LEG T ++  P  ++ +  L  LNLK C SLE LP    NL  L++L LSGCS
Sbjct: 683  EKLQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPEM--NLISLKTLTLSGCS 740

Query: 603  KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
              K+FP I     ++  L+LDGT+I ++P ++E L +L +LN+ DCK L  +P  +  LK
Sbjct: 741  TFKEFPLI---SDNIETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELK 797

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
            +L+ L LS C  L+  PE    I  L  L + GTA+                  V  +LP
Sbjct: 798  ALQELILSDCLNLKIFPEI--DISFLNILLLDGTAI-----------------EVMPQLP 838

Query: 723  SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS-LPTSITHLSKLLNI 781
            S+  LC                               LS+N+ +S LP  I+ LS+L  +
Sbjct: 839  SVQYLC-------------------------------LSRNAKISCLPVGISQLSQLKWL 867

Query: 782  ELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLC----KSDSTMI--ACLDSLKL 835
            +L+ C  L S+P+ PPN++ +  +GC+SL T+   L       ++ ST I   C +  + 
Sbjct: 868  DLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTNCENLEQA 927

Query: 836  LGNKSLAFSMLREYLEAVSNTRQH--------LSVVVPGSEIPEWFMYQNEGSSITVTRP 887
               +  +++  +  L + +  R +         S   PG E+P WF ++  GS + V   
Sbjct: 928  AKEEITSYAQRKCQLLSYARKRYNGGLVSESLFSTCFPGCEVPSWFCHETVGSELEVKLL 987

Query: 888  SNLYNKKKLVGYAICCVFHVL 908
             + ++ KKL G A+C V   L
Sbjct: 988  PH-WHDKKLAGIALCAVVSCL 1007


>gi|356558199|ref|XP_003547395.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1062

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 225/639 (35%), Positives = 336/639 (52%), Gaps = 46/639 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D +   +  L+        +IGI GM G GKTT+A  V+  +  E++   FL N RE S
Sbjct: 246 IDEKIAYVELLIRKEPEATCLIGIWGMAGNGKTTLAEEVFKKLQSEYDGCYFLPNEREQS 305

Query: 61  SKGGLVSLQRQLLSQLLK---LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
           S+ G+ SL++++ S LL+     DN   NV   ID    R+ R KVL+V+DDV D   L+
Sbjct: 306 SRHGIDSLKKEIFSGLLENVVTIDNP--NVSLDID---RRIGRMKVLIVLDDVNDPDHLE 360

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
            L G  + FGSGSRIIIT+R   +L  +  +E+Y+    + D+AL+LFN+ AFK      
Sbjct: 361 KLLGTPDNFGSGSRIIITTRYVQVLNANKANEIYQLGEFSLDKALELFNLIAFKQSDHQW 420

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
           E  +LS +++ YA G PL L+VL   L G++ +EW   L+ L+  PP++   ++++S+D 
Sbjct: 421 EYNELSKKVVDYAKGNPLVLKVLAQLLCGKNKEEWEGMLDTLKRMPPADAYKVMKLSYDE 480

Query: 238 LQELEKKIFLDIACFF-KGNDRDYVTN---FLEGCGFHPVIGIRV--LIEKCLITV-HNN 290
           L   E++IFLD+ACFF + +    V+N    L+G      +  R+  L +K LIT   +N
Sbjct: 481 LDRKEQQIFLDLACFFLRTHTTVNVSNLKSLLKGNESQETVTFRLGRLKDKALITYSDDN 540

Query: 291 TLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHE 350
            + MHD LQE+  +IV+R+S E+ G RSRLW   ++   L     T+ +  I++   H  
Sbjct: 541 VIAMHDSLQEMALEIVRRESSEDPGSRSRLWDPNDIFEALKNVKSTKAIRSILI---HLP 597

Query: 351 NEVYLCASAKAFSKMTNLRLLKI---CNLQ-------LPNGLEYLSNRLRLLGWRGYPLK 400
             +        F KM  L+ L+I   C          L   L++ +N LR L W  YPLK
Sbjct: 598 TFMKQELDPHIFGKMNRLQFLEISGKCEKDIFDEHNILAKWLQFSANELRFLCWYRYPLK 657

Query: 401 FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
            LP +   +K + + +    I  LW G+K+L  LK + L+ S+ L  +PD + A NLE L
Sbjct: 658 SLPEDFSAEKLVILKLPKGEIKYLWHGVKNLMNLKELHLTDSKMLEELPDLSNATNLEVL 717

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKS--------- 511
           +L+GC+ L  +HPS+    KL  LN++DCTSL TL     + SL  LNL           
Sbjct: 718 VLQGCSMLTRVHPSIFSLGKLEKLNLQDCTSLTTLASNSHLCSLSYLNLDKCEKLRKLSL 777

Query: 512 LPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVL 571
           +   I  L+   T       K + F     H   L  L LEG+ I+ LP  I+ L  L  
Sbjct: 778 IAENIKELRLRWT-------KVKAFSFTFGHESKLQLLLLEGSVIKKLPSYIKDLMQLSH 830

Query: 572 LNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKK--FP 608
           LN+  C +L+ +P    +LK L +     C+ LK   FP
Sbjct: 831 LNVSYCSNLQEIPKLPPSLKILDARYSQDCTSLKTVVFP 869



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 160/424 (37%), Gaps = 108/424 (25%)

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
            LK  PE   S + L  L L    IK +   ++ L  L+ L+L+D K L  LP  +    +
Sbjct: 656  LKSLPEDF-SAEKLVILKLPKGEIKYLWHGVKNLMNLKELHLTDSKMLEELPD-LSNATN 713

Query: 664  LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPS 723
            L+ L L GC  L  V  ++  +  LE+L                   NL   +    L S
Sbjct: 714  LEVLVLQGCSMLTRVHPSIFSLGKLEKL-------------------NLQDCTSLTTLAS 754

Query: 724  LSGLCSLRKLNLTDC-----------NLME--------GALPSDIGNLCSLKELYLSKNS 764
             S LCSL  LNL  C           N+ E         A     G+   L+ L L  + 
Sbjct: 755  NSHLCSLSYLNLDKCEKLRKLSLIAENIKELRLRWTKVKAFSFTFGHESKLQLLLLEGSV 814

Query: 765  FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRV---NGCASLVTLL------D 815
               LP+ I  L +L ++ +  C  LQ +P+LPP+++ +       C SL T++      +
Sbjct: 815  IKKLPSYIKDLMQLSHLNVSYCSNLQEIPKLPPSLKILDARYSQDCTSLKTVVFPSTATE 874

Query: 816  ALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSV------------- 862
             LK  + +     CL     L  +SL    L   +  +    + LSV             
Sbjct: 875  QLKEYRKEVLFWNCLK----LNQQSLEAIALNAQINVMKFANRRLSVSNHDDVENYNDYD 930

Query: 863  ----------VVPGSEIPEWFMYQNEGSSITV---TRPSNLYNKKKLVGYAICCVFHVLK 909
                      V PGS + EW  Y+   + I +   + P +L      VG+  C    +  
Sbjct: 931  KKYHFYQVVYVYPGSSVLEWLEYKTRNNYIIIDMSSAPPSL-----PVGFIFCFALGM-- 983

Query: 910  NSRGNNCFGSYPTHQLNCHI------------GHGIYGIGFRDKFGQAGSDHLWLLYLSR 957
                   +G     ++  +I              G+Y IG R+  G   SDHL ++Y  R
Sbjct: 984  -------YGDTSLERIEANITISDREGEGKKDSVGMY-IGLRN--GTIESDHLCVMYDQR 1033

Query: 958  QTCY 961
             + +
Sbjct: 1034 CSAF 1037


>gi|297791725|ref|XP_002863747.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309582|gb|EFH40006.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 989

 Score =  320 bits (819), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 218/623 (34%), Positives = 332/623 (53%), Gaps = 47/623 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV---- 56
           +++   K+ FL+   + +VRM+GICG  G+GKT+IARV+++ +S  F  + F+D      
Sbjct: 195 IETHIAKMNFLLHLEAKEVRMVGICGPSGIGKTSIARVLFNRLSRRFRCNVFIDRAFLSK 254

Query: 57  -REISSKGGL------VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDD 109
             E  S   L      + LQ   LS++L   D  I +    +  +G RL+  KVL+ IDD
Sbjct: 255 SMEHYSGANLGDYNMKLHLQGIFLSEILGKRDIKICH----LGAVGERLKNHKVLIFIDD 310

Query: 110 VVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKA 169
           +     L +LAG+ +WFG GSR+++ ++ +HLLK HG+  +Y+    +   +LQ+    A
Sbjct: 311 LEYQVVLDTLAGHTDWFGCGSRVVVITKYKHLLKAHGIGRIYEVPLPSNPLSLQILCQYA 370

Query: 170 FKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILD 229
           F+   P    ++L++     AG LPL L VLGS L  R    W   L R        I +
Sbjct: 371 FRQNHPPDGFMELASETSLRAGNLPLVLNVLGSHLRSRDKKYWMDMLLRFGKGQHGNIEE 430

Query: 230 ILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN 289
            L++S++GL + ++ IF  IACFF G + D + + L        +GI+ L++K LI    
Sbjct: 431 TLKLSYNGLNKNDEAIFRHIACFFNGEEVDDIKSLLADSDLDVNMGIKNLVDKSLIKETC 490

Query: 290 NTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHH 349
           NT+ MH L+QE+G++I + QS E  G+R  +   ++V  +L ++TGTE V GI LD    
Sbjct: 491 NTVEMHSLIQEIGKEINRTQSSEP-GEREFIVDSKDVFTILEDNTGTENVLGISLD-IDE 548

Query: 350 ENEVYLCASAKAFSKMTNLRLLKI-------CNLQLPNGLEYLSNRLRLLGWRGYPLKFL 402
            +E+++  SA  F +M NL+ L+I         L LP   +YL  +LRLL WRGYPL+ +
Sbjct: 549 TDELHIHESA--FKEMRNLQFLRISTKENKEVRLNLPEDFDYLPPKLRLLSWRGYPLRSM 606

Query: 403 PSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
           PS       +++ M YS    LW G++ L  LK M L  S+NL  +PD + A NLE L L
Sbjct: 607 PSTFCPQSLVKLEMRYSYFEMLWDGVQPLTTLKKMDLWGSKNLKEIPDLSMATNLETLNL 666

Query: 463 EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCL 522
             C+ L E+H S+   NKL  LN+  C +L TLP    +++L+ LNL           C 
Sbjct: 667 GACSSLVELHSSVQYLNKLKRLNLSYCENLETLPTNFNLQALDCLNL---------FGCS 717

Query: 523 STLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEI 582
           S          + FP+I     ++S L+L  T I  +P  IE  + L  + + NC  LE 
Sbjct: 718 S---------IKSFPDI---STNISYLNLSQTRIEEVPWWIENFTELRTIYMWNCDKLEY 765

Query: 583 LPVTVSNLKCLRSLKLSGCSKLK 605
           + + +S LK L  +  S C  LK
Sbjct: 766 VTLNISKLKHLAIVDFSDCGALK 788



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 166/396 (41%), Gaps = 80/396 (20%)

Query: 611 VRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNL 669
           V+ +  L ++ L G+ ++KE+P  + + T LE LNL  C +LV L SS+  L  LK LNL
Sbjct: 632 VQPLTTLKKMDLWGSKNLKEIPD-LSMATNLETLNLGACSSLVELHSSVQYLNKLKRLNL 690

Query: 670 SGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCS 729
           S C  LE +P       +L+ LD                 +NL   S     P +S   +
Sbjct: 691 SYCENLETLPTNF----NLQALDC----------------LNLFGCSSIKSFPDIS--TN 728

Query: 730 LRKLNLTDCNLMEGALPSDIGNLCSLKELYL---SKNSFVSLPTSITHLSKLLNIELEDC 786
           +  LNL+   + E  +P  I N   L+ +Y+    K  +V+L  +I+ L  L  ++  DC
Sbjct: 729 ISYLNLSQTRIEE--VPWWIENFTELRTIYMWNCDKLEYVTL--NISKLKHLAIVDFSDC 784

Query: 787 KRLQ--SLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFS 844
             L+  SL   P  + ++  N  + L   ++       D      LD L         F 
Sbjct: 785 GALKVASLNDSPITV-EMADNIHSKLPFYVEVSSSLPYDHFPRVELDFLN-------CFK 836

Query: 845 MLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSIT--------VTRPSNLYNKKKL 896
           + +E L    +  + L ++    E+P +F ++  G+S+T        +++P   +    +
Sbjct: 837 LDQEALLQQQSVFKRL-ILPADQEVPSYFTHRTTGTSMTNIPLLQTSLSQPFFRFLACAV 895

Query: 897 VGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYL- 955
           V   I  + H+           S+   ++NC    G+     R+ FG A     W +Y  
Sbjct: 896 VDSEIISIDHI-----------SFLI-EVNCQFIDGL-----RNHFGSA----YWPMYFA 934

Query: 956 -----SRQTCYDIRLPLESN---LEPFESNHVNVSF 983
                S    ++  LPL  +   L     +HV++ F
Sbjct: 935 AAPLGSHLVIFNCSLPLNGDYAYLAKRHYDHVDIQF 970



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 32/222 (14%)

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
           NK + LN+ +      LP K+ + S     L+S+P+T     C  +L V  ++++  F  
Sbjct: 575 NKEVRLNLPE--DFDYLPPKLRLLSWRGYPLRSMPSTF----CPQSL-VKLEMRYSYFEM 627

Query: 539 I---VEHMEHLSELHLEGTA-IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
           +   V+ +  L ++ L G+  ++ +P  + + + L  LNL  C SL  L  +V  L  L+
Sbjct: 628 LWDGVQPLTTLKKMDLWGSKNLKEIP-DLSMATNLETLNLGACSSLVELHSSVQYLNKLK 686

Query: 595 SLKLSGCSKLKKFP----------------EIVRSMKDLSE----LFLDGTSIKEVPSSI 634
            L LS C  L+  P                  ++S  D+S     L L  T I+EVP  I
Sbjct: 687 RLNLSYCENLETLPTNFNLQALDCLNLFGCSSIKSFPDISTNISYLNLSQTRIEEVPWWI 746

Query: 635 ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
           E  T+L  + + +C  L  +  +I  LK L  ++ S C  L+
Sbjct: 747 ENFTELRTIYMWNCDKLEYVTLNISKLKHLAIVDFSDCGALK 788


>gi|297837527|ref|XP_002886645.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332486|gb|EFH62904.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1037

 Score =  320 bits (819), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 230/699 (32%), Positives = 362/699 (51%), Gaps = 82/699 (11%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVR--- 57
           +++   K+++L+ S + +   +GI G GG+GKTTIAR +Y+ IS  F    F++NV+   
Sbjct: 190 LEAHLRKIQYLLQSETDEAMTLGISGPGGIGKTTIARALYNQISRNFPLRYFMENVKGSY 249

Query: 58  ---EISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
              +    G  + LQ QLLSQ+L      I N    +D++  RL+ +KVL+++DDV  ++
Sbjct: 250 RNIDCDEHGSKLRLQEQLLSQILNHNGVKICN----LDVIYERLRCQKVLIILDDVDSLE 305

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL +LA +   FG GSRII+T++D+ LL+ +G++  Y     + +EAL++F   AF+   
Sbjct: 306 QLDALAKDIYRFGHGSRIIVTTKDQELLQRYGINNTYHVGFPSNEEALEIFCRYAFRRSS 365

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           PL    +L+ R+      LPL L V+GS L G+  DEW+  + RLE     ++  +L++ 
Sbjct: 366 PLYGFEKLAIRVTELCSNLPLGLRVVGSSLRGKCEDEWKVIMNRLETSLDGDLERVLRVG 425

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLW 293
           +D L E ++ +FL IA FF   D DYV   L         G+R L+ + LI +  N  + 
Sbjct: 426 YDSLHEKDQALFLHIAIFFNYKDEDYVKAILGEDNLDVEHGLRNLVNRSLIDISTNGDIV 485

Query: 294 MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
           MH LLQ++G+Q + RQ P    KR  L    E+C VL   TGT  V GI  D     N  
Sbjct: 486 MHKLLQQMGRQAIHRQEP---WKRQILIDAHEICDVLEYDTGTRTVAGISFD---ASNIS 539

Query: 354 YLCASAKAFSKMTNLRLLKICN----LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMD 409
            +  S  AF +M NL+ L + +    + +P  L++   RL+LL W  YP K LP    ++
Sbjct: 540 KVFVSEGAFKRMRNLQFLSVSDENDRICIPEDLQF-PPRLKLLHWEAYPRKSLPIRFYLE 598

Query: 410 KTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLY 469
             +E+ M  S++ +LWKG + L  LK M LS S +L  +PD + A NL++L L+ C  L 
Sbjct: 599 NLVELDMQNSQLEKLWKGPQLLTNLKKMDLSMSRHLKELPDLSNATNLKRLNLDDCESLV 658

Query: 470 EIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG 529
           EI  S    +KL +L+M  CT L  +P ++ + SLE +N+ +                  
Sbjct: 659 EIPSSFSNLHKLKVLSMFACTKLEVIPTRMNLASLESVNMTACQ---------------- 702

Query: 530 DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSN 589
             + + FP+I  ++  LS   +  TA+  +P SI L S L +LN+          +  SN
Sbjct: 703 --RLKNFPDISRNILQLS---ISLTAVEQVPASIRLWSRLRVLNI----------IITSN 747

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL-LNLS-- 646
                        KLK    + +S++    L L  T ++ +P   + L +L+L LN S  
Sbjct: 748 ------------GKLKALTHVPQSVR---HLILSYTGVERIPYCKKSLHRLQLYLNGSRK 792

Query: 647 -------DCKNLVRLPSSIIALKSLKT-LNLSGCFKLEN 677
                  DC+ + +L   I    +  T LN + CFKL++
Sbjct: 793 LADSLRNDCEPMEQL---ICPYDTPYTQLNYTNCFKLDS 828



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 94/395 (23%), Positives = 158/395 (40%), Gaps = 108/395 (27%)

Query: 519 LKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCR 578
           ++ L  L VS +      PE ++    L  LH E    + LP+    L  LV L+++N +
Sbjct: 551 MRNLQFLSVSDENDRICIPEDLQFPPRLKLLHWEAYPRKSLPIRF-YLENLVELDMQNSQ 609

Query: 579 SLEIL---PVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIE 635
            LE L   P  ++NLK    + LS    LK+ P++  +                      
Sbjct: 610 -LEKLWKGPQLLTNLK---KMDLSMSRHLKELPDLSNA---------------------- 643

Query: 636 LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
             T L+ LNL DC++LV +PSS   L  LK L++  C KLE +P  +             
Sbjct: 644 --TNLKRLNLDDCESLVEIPSSFSNLHKLKVLSMFACTKLEVIPTRM------------- 688

Query: 696 TAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSL 755
                                          L SL  +N+T C  ++   P DI    ++
Sbjct: 689 ------------------------------NLASLESVNMTACQRLKN-FP-DISR--NI 714

Query: 756 KELYLSKNSFVSLPTSITHLSKL--LNIELEDCKRLQSLPQLPPNIR------------- 800
            +L +S  +   +P SI   S+L  LNI +    +L++L  +P ++R             
Sbjct: 715 LQLSISLTAVEQVPASIRLWSRLRVLNIIITSNGKLKALTHVPQSVRHLILSYTGVERIP 774

Query: 801 ---------QVRVNGCASLVTLLDALK-LCKSDSTMIACLDSLKLLGNKSLAFSMLREYL 850
                    Q+ +NG   L    D+L+  C+    +I   D+     N +  F +  +  
Sbjct: 775 YCKKSLHRLQLYLNGSRKLA---DSLRNDCEPMEQLICPYDTPYTQLNYTNCFKLDSKVQ 831

Query: 851 EA-VSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
            A ++ +       +PG E+PE F ++  G+S+T+
Sbjct: 832 RAIITQSFVQGWACLPGREVPEEFEHRARGNSLTI 866


>gi|15238107|ref|NP_198970.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10178009|dbj|BAB11461.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007308|gb|AED94691.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1085

 Score =  319 bits (818), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 227/651 (34%), Positives = 344/651 (52%), Gaps = 62/651 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVR-EI 59
           +++   KL  L+     DV+MIGI G  G+GK+TIAR +Y+ +S  F+   F+ N++  +
Sbjct: 189 LEAHLTKLNSLLCFEGDDVKMIGIWGPAGIGKSTIARALYNQLSSSFQLKCFMGNLKGSL 248

Query: 60  SSKGGL------VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDV 113
            S  G+       SLQ+ LL+++L   D  + N    +  +   LQ ++VL+++DDV D+
Sbjct: 249 KSIVGVDHYEFQKSLQKLLLAKILNQGDMRVHN----LAAIKEWLQDQRVLIILDDVDDL 304

Query: 114 KQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY 173
           +QL+ LA    WFGSGSRII+ + D+ +LK HG++++Y     + +EAL++  + AFK  
Sbjct: 305 EQLEVLAKELSWFGSGSRIIVATEDKKILKEHGINDIYHVDFPSMEEALEILCLSAFKQS 364

Query: 174 QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
                  +L+ +++   G LPL L ++GS L G S  EW   L R+E     +I  IL++
Sbjct: 365 SVPDGFEELAKKVVHLCGNLPLGLSIVGSSLRGESKHEWELQLPRIEASLDGKIESILKV 424

Query: 234 SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLW 293
            ++ L +  + +FL IACFF     DYVT  L         G++ L +KC + +  N  W
Sbjct: 425 GYERLSKKNQSLFLHIACFFNYRSVDYVTVMLADSNLDVRNGLKTLADKCFVHISING-W 483

Query: 294 M---HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHE 350
           +   H LLQ+LG+QIV  QS +E GKR  L + EE+  VLT+ TGT  V GI   +Y+  
Sbjct: 484 IVMHHHLLQQLGRQIVLEQS-DEPGKRQFLIEAEEIRAVLTDETGTGSVIGI---SYNTS 539

Query: 351 NEVYLCASAKAFSKMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFL 402
           N   +  S  AF  M NLR L+I        C LQ+P  +EYL   LRLL W  YP K L
Sbjct: 540 NIGEVSVSKGAFEGMRNLRFLRIFNYLFSGKCTLQIPEDMEYLP-PLRLLHWDRYPRKSL 598

Query: 403 PSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
           P+  Q ++ +E++M +S + +LW GI+ L  +K + LS S  L  +P+ + A NLE L L
Sbjct: 599 PTKFQPERLLELHMPHSNLEKLWGGIQPLPNIKSIDLSFSIRLKEIPNLSNATNLETLNL 658

Query: 463 EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLE--KLN----LKSLPTTI 516
             C  L E+  S+   +KL  L M  C  L  +P  I + SLE  ++N    L+  P   
Sbjct: 659 THCKTLVELPSSISNLHKLKKLKMSGCEKLRVIPTNINLASLEVVRMNYCSRLRRFPDIS 718

Query: 517 SGLKCLSTLDVSGDLKFREFP--------------------EIVEHM-EHLSELHLEGTA 555
           S +K LS     G+ K   FP                    +I+ H  + +  L+L  + 
Sbjct: 719 SNIKTLSV----GNTKIENFPPSVAGSWSRLARLEIGSRSLKILTHAPQSIISLNLSNSD 774

Query: 556 IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKK 606
           IR +P  +  L  LV L ++NCR L  +P        L SL  + C+ LK+
Sbjct: 775 IRRIPDCVISLPYLVELIVENCRKLVTIPALPP---WLESLNANKCASLKR 822



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 166/401 (41%), Gaps = 72/401 (17%)

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
           + PE +E++  L  LH +    + LP   +    L+ L++ +  +LE L   +  L  ++
Sbjct: 574 QIPEDMEYLPPLRLLHWDRYPRKSLPTKFQP-ERLLELHMPHS-NLEKLWGGIQPLPNIK 631

Query: 595 SLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRL 654
           S+ LS   +LK+ P +  +                        T LE LNL+ CK LV L
Sbjct: 632 SIDLSFSIRLKEIPNLSNA------------------------TNLETLNLTHCKTLVEL 667

Query: 655 PSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMR 714
           PSSI  L  LK L +SGC KL  +P  +    +L  L++           +  I  N+  
Sbjct: 668 PSSISNLHKLKKLKMSGCEKLRVIPTNI----NLASLEVVRMNYCSRLRRFPDISSNIKT 723

Query: 715 KSVA-LKL----PSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLP 769
            SV   K+    PS++G  S     L    +   +L        S+  L LS +    +P
Sbjct: 724 LSVGNTKIENFPPSVAGSWS----RLARLEIGSRSLKILTHAPQSIISLNLSNSDIRRIP 779

Query: 770 TSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKS--DSTMI 827
             +  L  L+ + +E+C++L ++P LPP +  +  N CASL       ++C S  + T++
Sbjct: 780 DCVISLPYLVELIVENCRKLVTIPALPPWLESLNANKCASLK------RVCCSFGNPTIL 833

Query: 828 ACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRP 887
              + LKL         M +   E          + +PG EIP  F ++  G+SIT+   
Sbjct: 834 TFYNCLKLDEEARRGIIMQQPVDEY---------ICLPGKEIPAEFSHKAVGNSITIPLA 884

Query: 888 SNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCH 928
              +                L +SR   CF   P     CH
Sbjct: 885 PGTF----------------LASSRYKACFVILPVTGYRCH 909


>gi|297794871|ref|XP_002865320.1| hypothetical protein ARALYDRAFT_330904 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297311155|gb|EFH41579.1| hypothetical protein ARALYDRAFT_330904 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1156

 Score =  319 bits (818), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 238/699 (34%), Positives = 346/699 (49%), Gaps = 72/699 (10%)

Query: 18  DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLL 77
           + +++GI GM G+GKTT+A  +Y    H F+ S F+ NV + S +G    LQ++LL +LL
Sbjct: 290 ETKIVGIVGMPGIGKTTLAETLYRKWKHRFKRSKFIPNVSKESQRG----LQKRLLVELL 345

Query: 78  KLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSR 137
                      +  +     L +KKV +VIDDV   +Q+++L G  +W   GS+I+ITS 
Sbjct: 346 MDIHYKTGYSENEHEFCKDALLQKKVFVVIDDVSSKEQIKTLFGQWDWIKKGSKIVITSS 405

Query: 138 DEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLAL 197
           DE LLK   VD+ Y    LN   +L  F   AF         V+LS   + YA G PL L
Sbjct: 406 DESLLK-ELVDDTYVVPRLNSTGSLLWFTNHAFGLDHAEGNFVKLSRHFLNYAKGNPLVL 464

Query: 198 EVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGND 257
              G  L G+    W   ++ L++     I D+L+  +D L E +K IFLDIACFF+  +
Sbjct: 465 RAFGVELRGKDKAYWEQRIKTLKLISNKMIQDVLRRRYDELTERQKDIFLDIACFFESEN 524

Query: 258 RDYVTNFLEGCGFHPVIG--IRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELG 315
             YV      C  +  I   IR L +K L+ +      MHD+L    +++  +   E   
Sbjct: 525 ASYVR-----CLVNSSIPDEIRDLQDKFLVNISCGRFEMHDILCTFAKELASQALTEVTR 579

Query: 316 KRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICN 375
              RLWK +++  +L      E V GI LD      E+     AK F +M N+R LKI N
Sbjct: 580 VHLRLWKYQDIIWLLNNKLEMENVRGIFLDMSEVPEEMIF--DAKIF-RMCNIRYLKIYN 636

Query: 376 LQLPNGLEYLS------------NRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGE 423
              P   E +             N++  L W  YPL  LPS+   +  + + + YS I +
Sbjct: 637 SVYPKEGEGIFKFDRFREFQLPLNKVSYLHWIKYPLDKLPSDFNPENLVNLELPYSSIKQ 696

Query: 424 LWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLII 483
           +W+G+K   KLK   LS+S  L  +   + A NLE+L LEGCT L ++   +     L+ 
Sbjct: 697 VWEGVKETPKLKWANLSYSSKLTNLLGLSNAKNLERLNLEGCTSLLKLPKEMENMESLVF 756

Query: 484 LNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHM 543
           LNM+ C SL  L          ++NL SL          + L +S   K  EF  I E++
Sbjct: 757 LNMRGCKSLTFL---------HRMNLSSL----------TILILSDCSKLEEFEVISENL 797

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           E    L+L+GTAI+GLP ++  L  L +LN+K C  LE LP  +   K L  L LS CSK
Sbjct: 798 E---ALYLDGTAIKGLPPTVRDLKRLAILNMKGCTELESLPECLGKQKALEELILSNCSK 854

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVP--------------------SSIELLTKLELL 643
           L+  P+ V++MK L  L LDGT IK++P                     S+   + L+ +
Sbjct: 855 LESVPKAVKNMKKLRILLLDGTRIKDIPKINSLERLSLSRNIAMIHLQDSLSGFSNLKCV 914

Query: 644 NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
            + +C+NL  LPS     +SL+ LN+ GC +LE V   L
Sbjct: 915 VMKNCENLRYLPS---LPRSLEYLNVYGCERLETVENPL 950



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 210/484 (43%), Gaps = 82/484 (16%)

Query: 542  HMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
            + ++L  L+LEG T++  LP  +E +  LV LN++ C+SL  L     NL  L  L LS 
Sbjct: 726  NAKNLERLNLEGCTSLLKLPKEMENMESLVFLNMRGCKSLTFLHRM--NLSSLTILILSD 783

Query: 601  CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
            CSKL++F  I    ++L  L+LDGT+IK +P ++  L +L +LN+  C  L  LP  +  
Sbjct: 784  CSKLEEFEVI---SENLEALYLDGTAIKGLPPTVRDLKRLAILNMKGCTELESLPECLGK 840

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK 720
             K+L+ L LS C KLE+VP+ +  ++ L  L                             
Sbjct: 841  QKALEELILSNCSKLESVPKAVKNMKKLRIL----------------------------- 871

Query: 721  LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKN-SFVSLPTSITHLSKLL 779
                               L++G    DI  + SL+ L LS+N + + L  S++  S L 
Sbjct: 872  -------------------LLDGTRIKDIPKINSLERLSLSRNIAMIHLQDSLSGFSNLK 912

Query: 780  NIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCK-SDSTMIACLDSLKLLGN 838
             + +++C+ L+ LP LP ++  + V GC  L T+ + L      +   +  + S  L  N
Sbjct: 913  CVVMKNCENLRYLPSLPRSLEYLNVYGCERLETVENPLVFRGFFNVIQLEKIRSTFLFTN 972

Query: 839  KSLAFSMLREYLEAVSNTRQH----------------LSVVVPGSEIPEWFMYQNEGSSI 882
             +  F   +E + + +  + H                 +   PG  +P WF YQ  GS  
Sbjct: 973  CNNLFQDAKESISSYAKWKCHRLALDCYQLGIVSGAFFNTCYPGFIVPSWFHYQAVGSVF 1032

Query: 883  TVTRPSNLYNKKKLVGYAICCVFHVLKNSRG-NNCFGSYPTHQLNCHIGHGIY---GIGF 938
                 S+  N   L G A+C V    +N     + F    T Q     G  I     IG 
Sbjct: 1033 EPRLKSHWCN-NMLYGIALCAVVSFHENQDPIIDSFSVKCTLQFENEDGSRIRFDCDIGS 1091

Query: 939  RDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGL 998
              K G+ G+DH+++ Y+    C   RL    ++  +   +V V F    G   EV  CG 
Sbjct: 1092 LTKPGRIGADHVFIGYV---PCS--RLKDYYSIPIYHPTYVKVEFYLPDGCKSEVVDCGF 1146

Query: 999  HPVY 1002
              +Y
Sbjct: 1147 RLMY 1150


>gi|297805932|ref|XP_002870850.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316686|gb|EFH47109.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1053

 Score =  319 bits (818), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 243/738 (32%), Positives = 375/738 (50%), Gaps = 105/738 (14%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           M +   ++  L+   S +VRMIGI G  G+GKTTIARV+Y   S  FE S F++N++E+ 
Sbjct: 239 MGAHMNEMESLLCLDSDEVRMIGIWGPSGIGKTTIARVLYSQFSENFELSIFMENIKELM 298

Query: 60  -------SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVD 112
                        + LQ+Q LSQ++   D  + ++    D    RL  K+VL+V+D +  
Sbjct: 299 YTRPVCSDEYSAKIQLQQQFLSQIINHKDMELPHLGVAQD----RLNDKRVLIVLDSIDQ 354

Query: 113 VKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKT 172
             QL ++A    WFG GSRIIIT++D+ LLK HG++ +YK    +  EA Q+F M AF  
Sbjct: 355 SIQLDAIAKETRWFGHGSRIIITTQDQRLLKAHGINHIYKVEFPSAYEAYQIFCMYAFGQ 414

Query: 173 YQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQ 232
             P     +L+ ++ +  G LPL L V+GS   G S  EW + L RL+I   + I  IL+
Sbjct: 415 NFPKDGFEELAWQVTKLLGNLPLGLRVMGSHFRGMSRHEWVNALPRLKIRLDASIQSILK 474

Query: 233 ISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLI-----TV 287
            S+D L + +K +FL IAC F  N+   V ++L         G+ +L EK LI     + 
Sbjct: 475 FSYDALCDEDKDLFLHIACLF--NNDGMVKDYLALSFLDVRQGLHLLAEKSLIALEIFSA 532

Query: 288 HNNTLWMHDLLQELGQQIVQR----QSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIV 343
               + MH+LL +LG+ IV+     QS    GKR  L    ++C VLT++TG+  V GI+
Sbjct: 533 DYTHIKMHNLLVQLGRDIVRHKPGHQSICAPGKRQFLVDARDICEVLTDNTGSRNVIGIL 592

Query: 344 LDNYHHENEVYLCASAKAFSKMTNLRLLKIC--------NLQLPNGLEYLSNRLRLLGWR 395
            + Y    E+ +  S +AF  M+NL+ L+           L LP GL  L  +LR+L W 
Sbjct: 593 FEVYTLSGELNI--SERAFEGMSNLKFLRFHGPYDGQSDKLYLPQGLNNLPRKLRILEWS 650

Query: 396 GYPLKFLPSNLQMDKTIEIYMCYSRIGELWKG--------IKHLDKLKVMILSHSENLIR 447
            +P+K LPSN      +++ M YS++  LW+G        +  L  LK M L  S++L  
Sbjct: 651 HFPMKCLPSNFCTKYLVQLCMGYSKLQNLWQGNQVSKRSDLPVLGNLKRMDLWESKHLKE 710

Query: 448 MPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL 507
           +PD + A NLEKL L GC+ L E+  SL    KL +LN++ C+ L               
Sbjct: 711 LPDLSTATNLEKLTLFGCSSLAELPSSLGNLQKLRMLNLRGCSKL--------------- 755

Query: 508 NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
             ++LPT I+    L  LD++  L  + FPEI  +++   +L L  TAI+ +P +I+  S
Sbjct: 756 --EALPTNINLES-LDDLDLADCLLIKSFPEISTNIK---DLMLTYTAIKEVPSTIKSWS 809

Query: 568 GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSI 627
            L                        R+L++S    LK+FP    ++  +++L+ + T I
Sbjct: 810 HL------------------------RNLEMSYNDNLKEFPH---ALDIITKLYFNDTEI 842

Query: 628 KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
           +E+P  ++ +++L+ L L  CK LV +P    +L ++  +N                 +S
Sbjct: 843 QEIPLWVKKISRLQTLVLEGCKRLVTIPQLSDSLSNVTAIN----------------CQS 886

Query: 688 LEELDISGTAVPHSTSWY 705
           LE LD S    P    W+
Sbjct: 887 LERLDFSFHNHPKILLWF 904



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 118/262 (45%), Gaps = 24/262 (9%)

Query: 627 IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIE 686
           +KE+P  +   T LE L L  C +L  LPSS+  L+ L+ LNL GC KLE +P  +    
Sbjct: 708 LKELPD-LSTATNLEKLTLFGCSSLAELPSSLGNLQKLRMLNLRGCSKLEALPTNINLES 766

Query: 687 SLEELDISGTAVPHSTSWYSYIPINLMRKSVALK-LPS-LSGLCSLRKLNLT-DCNLMEG 743
             +        +       + I  +LM    A+K +PS +     LR L ++ + NL E 
Sbjct: 767 LDDLDLADCLLIKSFPEISTNIK-DLMLTYTAIKEVPSTIKSWSHLRNLEMSYNDNLKEF 825

Query: 744 ALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR 803
               DI     + +LY +      +P  +  +S+L  + LE CKRL ++PQL  ++  V 
Sbjct: 826 PHALDI-----ITKLYFNDTEIQEIPLWVKKISRLQTLVLEGCKRLVTIPQLSDSLSNVT 880

Query: 804 VNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVV 863
              C SL  L            ++  ++  K L N++      RE+++            
Sbjct: 881 AINCQSLERL--DFSFHNHPKILLWFINCFK-LNNEA------REFIQTSCTF-----AF 926

Query: 864 VPGSEIPEWFMYQNEGSSITVT 885
           +PG E+P  F Y+  GSSI V 
Sbjct: 927 LPGREVPANFTYRANGSSIMVN 948


>gi|359493574|ref|XP_002271071.2| PREDICTED: TMV resistance protein N [Vitis vinifera]
          Length = 813

 Score =  318 bits (816), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 177/384 (46%), Positives = 249/384 (64%), Gaps = 8/384 (2%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MDSR EKL  L+   S+DVRM+G+ G+GG+GKTTI   +Y+ ISH+FE+   L NVR+ S
Sbjct: 199 MDSRLEKLISLLKIESNDVRMVGVYGLGGIGKTTIINALYNQISHQFESVSLLTNVRKES 258

Query: 61  SK--GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
           +K  G L   Q+ L   L       + NV++GI ++  +L  KKVL+ +DDV ++ QL+ 
Sbjct: 259 TKNSGLLKLQQKLLDDTLRTKGQIVLKNVYEGIKIIRDKLSSKKVLVFLDDVDELTQLEH 318

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G   WFG GSRIIIT+R + LL  H V+++Y+   LN+ EALQLF   AFK +   + 
Sbjct: 319 LIGKHNWFGPGSRIIITTRKKDLLTRHEVNDIYEVKKLNFHEALQLFCRYAFKQHHLKEG 378

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
              LS +++RYA GLPLAL+VLGS L G+ +  W+S L +LE  P  EI+++L+ISFDGL
Sbjct: 379 YADLSHQVVRYADGLPLALKVLGSLLFGKRLPNWKSELRKLEKVPNMEIVNVLKISFDGL 438

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDL 297
              ++ IFLDIACFFKG D + V+  L+G  F+   GI  L+++C IT+  + T+ MHDL
Sbjct: 439 DYTQRMIFLDIACFFKGGDVEIVSRILDGSEFNAESGINALVDRCFITISKDKTIEMHDL 498

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           L ++G+ IV  + P E G+RSRLW+  ++  VL  +TGTE +EGI LD    E   + C 
Sbjct: 499 LAQMGKGIVDEECPNEPGERSRLWRHTDIYRVLKRNTGTEKIEGIFLDVDKSEQIQFTC- 557

Query: 358 SAKAFSKMTNLRLLKICN--LQLP 379
             KAF +M  LRLL + +  +QLP
Sbjct: 558 --KAFERMNRLRLLVVSHNRIQLP 579


>gi|15237516|ref|NP_198907.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177970|dbj|BAB11353.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007232|gb|AED94615.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1104

 Score =  318 bits (816), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 218/598 (36%), Positives = 327/598 (54%), Gaps = 29/598 (4%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQ 75
           S DV+MIGI G  G+GKTTIAR +++ +S  F  S F+  + +++     + LQ +LLS+
Sbjct: 203 SDDVKMIGIWGPAGIGKTTIARALFNQLSTGFRLSCFMGTI-DVNDYDSKLCLQNKLLSK 261

Query: 76  LLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIIT 135
           +L   D  I +    +  +   L  ++VL+V+DDV D++QL+ LA    WFG GSRII++
Sbjct: 262 ILNQKDMKIHH----LGAIEEWLHNQRVLIVLDDVDDLEQLEVLAKESSWFGHGSRIIVS 317

Query: 136 SRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPL 195
             D  +LK HG++++Y     + +EAL++  + AFK   P     +++ R++   G LPL
Sbjct: 318 LNDRKILKAHGINDIYDVDFPSEEEALEILCLSAFKQNSPQDGFEEVAKRVVELCGKLPL 377

Query: 196 ALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKG 255
            L V+GS   G S DEWR  L  +E     +I ++L++ +D L E  + +FL IACFF  
Sbjct: 378 GLRVVGSSFYGESEDEWRIQLYGIETNLDRKIENVLRVGYDKLSERHQSLFLHIACFFNH 437

Query: 256 NDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELG 315
              DYVT  L         G++ L  K L++  N  + MH LLQ+LG+Q+V +Q   + G
Sbjct: 438 KSVDYVTTMLADSTLDVENGLKTLAAKSLVST-NGWITMHCLLQQLGRQVVVQQG--DPG 494

Query: 316 KRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICN 375
           KR  L + +E+  VL   TGTE V GI  D    E    L  S +AF++M NL+ L   N
Sbjct: 495 KRQFLVEAKEIRDVLANETGTESVIGISFDISKIET---LSISKRAFNRMRNLKFLNFYN 551

Query: 376 --LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDK 433
             + L   +EYL  RLRLL W  YP K LP   + +  +E+YM +S++ +LW GI+ L  
Sbjct: 552 GSVSLLEDMEYLP-RLRLLYWGSYPRKSLPLTFKPECLVELYMGFSKLEKLWGGIQPLTN 610

Query: 434 LKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLI 493
           LK + L +S NL  +P+ + A NL+ L L GC  L EI  S+    KL +L    C  L 
Sbjct: 611 LKKINLGYSSNLKEIPNLSKATNLKTLTLTGCESLVEIPSSIWNLQKLEMLYASGCIKLQ 670

Query: 494 TLPGKILMKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKFREFP-EIVEHMEHL 546
            +P  I + SLE++N      L+S P   S +K    L V+G +  +EFP  IV H   L
Sbjct: 671 VIPTNINLASLEEVNMSNCSRLRSFPDISSNIK---RLYVAGTM-IKEFPASIVGHWCRL 726

Query: 547 SELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKL 604
             L +   +++ L    E ++ L L N      ++++P  V  L  L SL +  C+KL
Sbjct: 727 DFLQIGSRSLKRLTHVPESVTHLDLRN----SDIKMIPDCVIGLPHLVSLLVENCTKL 780



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 157/360 (43%), Gaps = 65/360 (18%)

Query: 583 LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLTKLE 641
           LP+T    +CL  L + G SKL+K    ++ + +L ++ L  +S +KE+P+ +   T L+
Sbjct: 579 LPLTFKP-ECLVELYM-GFSKLEKLWGGIQPLTNLKKINLGYSSNLKEIPN-LSKATNLK 635

Query: 642 LLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHS 701
            L L+ C++LV +PSSI  L+ L+ L  SGC KL+ +P  +  + SLEE+++S  +   S
Sbjct: 636 TLTLTGCESLVEIPSSIWNLQKLEMLYASGCIKLQVIPTNI-NLASLEEVNMSNCSRLRS 694

Query: 702 TSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDI-GNLCSLKELYL 760
              +  I  N+ R  VA                      M    P+ I G+ C L  L +
Sbjct: 695 ---FPDISSNIKRLYVA--------------------GTMIKEFPASIVGHWCRLDFLQI 731

Query: 761 SKNSFVSL---PTSITHLS-----------------KLLNIELEDCKRLQSLPQLPPNIR 800
              S   L   P S+THL                   L+++ +E+C +L S+    P++ 
Sbjct: 732 GSRSLKRLTHVPESVTHLDLRNSDIKMIPDCVIGLPHLVSLLVENCTKLVSIQGHSPSLV 791

Query: 801 QVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHL 860
            +  + C SL ++  +     S      CL              + +E    +     + 
Sbjct: 792 TLFADHCISLKSVCCSFHGPISKLMFYNCL-------------KLDKESKRGIIQQSGNK 838

Query: 861 SVVVPGSEIPEWFMYQNEGSSITVT-RPSNLYNKKKLVGYAICCVFHVLKNSRGN--NCF 917
           S+ +PG EIP  F +Q  G+ IT++  P           +  C +   +KN   N  NCF
Sbjct: 839 SICLPGKEIPAEFTHQTIGNLITISLAPGCEEAYSTFSRFKACLLLSPIKNFAFNKINCF 898



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 52/214 (24%)

Query: 510 KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTA-IRGLPLSIELLSG 568
           KSLP T    +CL  L + G  K  +    ++ + +L +++L  ++ ++ +P ++   + 
Sbjct: 577 KSLPLTFKP-ECLVELYM-GFSKLEKLWGGIQPLTNLKKINLGYSSNLKEIP-NLSKATN 633

Query: 569 LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIV----------------R 612
           L  L L  C SL  +P ++ NL+ L  L  SGC KL+  P  +                R
Sbjct: 634 LKTLTLTGCESLVEIPSSIWNLQKLEMLYASGCIKLQVIPTNINLASLEEVNMSNCSRLR 693

Query: 613 SMKDLS----ELFLDGTSIKEVPSSI------------------------ELLTKLELLN 644
           S  D+S     L++ GT IKE P+SI                        E +T L+L N
Sbjct: 694 SFPDISSNIKRLYVAGTMIKEFPASIVGHWCRLDFLQIGSRSLKRLTHVPESVTHLDLRN 753

Query: 645 LSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
            SD K    +P  +I L  L +L +  C KL ++
Sbjct: 754 -SDIK---MIPDCVIGLPHLVSLLVENCTKLVSI 783


>gi|227438181|gb|ACP30580.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1275

 Score =  318 bits (816), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 227/695 (32%), Positives = 363/695 (52%), Gaps = 47/695 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +  R ++L    D    + R +G+ GM G+GKTT+AR +Y+    +F +   + ++R  S
Sbjct: 212 LKQRLDELEEKFDLDCQETRYLGVVGMPGIGKTTLARELYETWQCKFVSHVLIQDIRRTS 271

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            + GL  L   LL +LL + ++ + +     +   S L + KVL+V+DDV D KQ++ L 
Sbjct: 272 KELGLDCLPALLLEELLGVRNSDVKSSQGAYESYKSELLKHKVLVVLDDVSDRKQIEVLL 331

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE-- 178
           G+ +W   GSRI+I++ D+ L++   VD  Y    LN+ + L  F   AF  +       
Sbjct: 332 GSCDWIRQGSRIVISTSDKSLIQ-DVVDYTYVVPQLNHKDGLGHFGRYAFDHHSSKHNNE 390

Query: 179 -CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
             ++LS   + Y  G PLAL++LG+ L+G+    W++ L  L       I D+L+ S++ 
Sbjct: 391 VIMKLSKEFVHYVRGHPLALKLLGADLNGKDEGYWKTILATLSQSSCPCIRDVLEESYNE 450

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDL 297
           L +  K+IFLD+AC F+  D  YV + L+         I+ LI K +I V +  + MHDL
Sbjct: 451 LSQEHKEIFLDMAC-FRREDESYVASLLDTS--EAAREIKTLINKFMIDVSDGRVEMHDL 507

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           L    ++I +R   ++     RLW  +++  VL      E V GI L+    + E+ L  
Sbjct: 508 LYTFAKEICRRAHAQDGKGGHRLWHHQDIIDVLKNIEEGEKVRGIFLNMNEMKREMSL-- 565

Query: 358 SAKAFSKMTNLRLLKICN------------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSN 405
            +  F  M  LR LKI +            + LP+GL +    +R L W  +PLK LP +
Sbjct: 566 DSCTFEPMLGLRYLKIYSSGCPEQCRPNNKINLPDGLNFPVEEVRYLHWLEFPLKELPPD 625

Query: 406 LQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
                 +++ + YS+I  +W   K   KLK + L+HS NL  +   + A NL++L LEGC
Sbjct: 626 FNPRNLVDLKLPYSKIERIWSDDKDTSKLKWVNLNHSSNLRVLSGLSKAQNLQRLNLEGC 685

Query: 466 TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTL 525
           T++  +   +     L++LN+  CTSL +LP +I + SLE                  TL
Sbjct: 686 TKMETLPHDMQHMRSLLVLNLNGCTSLNSLP-EISLVSLE------------------TL 726

Query: 526 DVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPV 585
            +S     +EF  I +++E    L+L+GT+++ LPL I++L  L LLN+K C  L+  P 
Sbjct: 727 ILSNCSNLKEFRVISQNLE---ALYLDGTSVKKLPLDIKILKRLALLNMKGCTKLKEFPD 783

Query: 586 TVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNL 645
            + +LK L+ L LS CSKL++FP    S+K L  L LD T + E+P     ++ L+ L L
Sbjct: 784 CLDDLKALKELILSDCSKLQQFPANGESIKVLETLRLDATGLTEIPK----ISSLQCLCL 839

Query: 646 SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
           S    ++ LP +I  L  LK L+L  C  L ++P+
Sbjct: 840 SKNDQIISLPDNISQLYQLKWLDLKYCKSLTSIPK 874



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 209/449 (46%), Gaps = 80/449 (17%)

Query: 544  EHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
            ++L  L+LEG T +  LP  ++ +  L++LNL  C SL  LP    +L  L +L LS CS
Sbjct: 675  QNLQRLNLEGCTKMETLPHDMQHMRSLLVLNLNGCTSLNSLPEI--SLVSLETLILSNCS 732

Query: 603  KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
             LK+F  I    ++L  L+LDGTS+K++P  I++L +L LLN+  C  L   P  +  LK
Sbjct: 733  NLKEFRVI---SQNLEALYLDGTSVKKLPLDIKILKRLALLNMKGCTKLKEFPDCLDDLK 789

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
            +LK L LS C KL+  P     I+ LE L +  T +       + IP          K+ 
Sbjct: 790  ALKELILSDCSKLQQFPANGESIKVLETLRLDATGL-------TEIP----------KIS 832

Query: 723  SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNS-FVSLPTSITHLSKLLNI 781
            SL  LC                               LSKN   +SLP +I+ L +L  +
Sbjct: 833  SLQCLC-------------------------------LSKNDQIISLPDNISQLYQLKWL 861

Query: 782  ELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACL-----DSLKLL 836
            +L+ CK L S+P+LPPN++    +GC SL T+ + L    +   + +       + L++ 
Sbjct: 862  DLKYCKSLTSIPKLPPNLQHFDAHGCCSLKTVSNPLACLTTTQQICSTFIFTSCNKLEMS 921

Query: 837  GNKSL-AFSMLREYLEA-------VSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPS 888
              K + +F+  +  L +       VS+     S   PGSE+P W  ++  G  + +  P 
Sbjct: 922  AKKDISSFAQRKCQLLSDAQNCCNVSDLEPLFSTCFPGSELPSWLGHEAVGCMLELRMPP 981

Query: 889  NLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGI---YGIG-FRDKF-- 942
            + + + KL G A+C V     +     CF    T ++    G  I   + +G  R++   
Sbjct: 982  H-WRENKLAGLALCAVVSFPNSQVQMKCFSVKCTLKIEVKEGSWIDFSFPVGSLRNQDNV 1040

Query: 943  --GQAGSDHLWLLYLSRQTCYDIRLPLES 969
                A  +H+++ Y+S   C  I   LES
Sbjct: 1041 VENTASPEHIFIGYIS---CSKIFKRLES 1066


>gi|449447729|ref|XP_004141620.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 838

 Score =  318 bits (816), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 249/741 (33%), Positives = 384/741 (51%), Gaps = 63/741 (8%)

Query: 76  LLKLADNSIWNVFDGIDMLGSRLQR-KKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIII 134
            LK  D  + +   G++++   L   K VL+V D + +  QL+ LAG+ +WFG+GSRIII
Sbjct: 40  FLKPIDIQVLDENHGVELIMQHLSSLKNVLIVFDGITERSQLEMLAGSPDWFGAGSRIII 99

Query: 135 TSRDEHLLKTHGV-DEV--YKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAG 191
           T+ ++++       D+V  Y    L+++ A  LF   AF  +   Q    L   +I   G
Sbjct: 100 TTTNKNIFHHPNFKDKVQEYNVELLSHEAAFSLFCKLAFGDHPHTQNMDDLCNEMIEKVG 159

Query: 192 GLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEIL-DILQISFDGLQELEKKIFLDIA 250
            LPLALE +   L G+++D W  TL+         I  D+L+ S++GL+   ++IFLD+A
Sbjct: 160 RLPLALEKIAFSLYGQNIDVWEHTLKNFHQVVYDNIFSDVLKSSYEGLEAESQQIFLDLA 219

Query: 251 CFFKGNDRDYVTNFLEGCGF-HPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQ 309
           CF  G   D V   L+G G+  P   +++L+++CLI + +  + MH L+  +GQ+IV R 
Sbjct: 220 CFLNGEKVDRVIQILQGFGYTSPQTNLQLLVDRCLIDILDGHIQMHILILCMGQEIVHR- 278

Query: 310 SPEELG--KRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTN 367
              ELG  +++R+W  ++   +  E+   + + GIV+D    E  V     AKAF+ M+ 
Sbjct: 279 ---ELGNCQQTRIWLRDDARRLFHENNELKYIRGIVMDLEEEEELVL---KAKAFADMSE 332

Query: 368 LRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKG 427
           LR+L+I N+QL   +E LSN+L LL W GYP K+LPS  Q    +E+++  S +  LW G
Sbjct: 333 LRILRINNVQLSEDIECLSNKLTLLNWPGYPSKYLPSTFQPPSLLELHLPGSNVERLWNG 392

Query: 428 IKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMK 487
            ++   LK +  S S+ L+  P+F+ AP L +LIL  C RL ++H S+   ++LI+L+M+
Sbjct: 393 TQNFKNLKEIDASDSKFLVETPNFSEAPKLRRLILRNCGRLNKVHSSINSLHRLILLDME 452

Query: 488 DCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLS 547
            C S  +                S P T   LK L    V  +     FPE    M +L+
Sbjct: 453 GCVSFRSF---------------SFPVTCKSLKTL----VLSNCGLEFFPEFGCVMGYLT 493

Query: 548 ELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKF 607
           ELH++GT+I  L  SI  L GLVLLNL+NC  L  LP  +  L  L++L L+GC  L K 
Sbjct: 494 ELHIDGTSINKLSPSITNLLGLVLLNLRNCIRLSSLPTEICRLSSLKTLILNGCKNLDKI 553

Query: 608 PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA---LKSL 664
           P  +R +K L EL + GTSI  +P     L  L +LN    K+ +    + +A   L+SL
Sbjct: 554 PPCLRYVKHLEELDIGGTSISTIP----FLENLRILNCERLKSNIWHSLAGLAAQYLRSL 609

Query: 665 KTLNLSGCFKL-ENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPS 723
             LNLS C  + E++P  L    SLE LD+S       +                    S
Sbjct: 610 NDLNLSDCNLVDEDIPNDLELFSSLEILDLSSNHFERLSE-------------------S 650

Query: 724 LSGLCSLRKLNLTDCNLMEGA--LPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNI 781
           +  L +L+ L L DCN ++    LP  I  +   K L + + S  S   + + +S   + 
Sbjct: 651 IKQLINLKVLYLNDCNKLKQVPKLPKSIKYVGGEKSLGMLRTSQGSPVCTRSEMSPSPSR 710

Query: 782 ELEDCKRLQSLPQLPPNIRQV 802
           +        ++P+LP +IR V
Sbjct: 711 DHSFTCTEYAVPKLPRSIRSV 731



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 10/67 (14%)

Query: 166 NMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPS 225
           N + FK Y          + I+   G LPLAL  +GS+L  + +D W  TL+RL+ E  +
Sbjct: 776 NFELFKKY----------SEIVEKVGRLPLALRTIGSYLHNKDLDVWNETLKRLDEEEQN 825

Query: 226 EILDILQ 232
               IL+
Sbjct: 826 YFDTILK 832


>gi|297811961|ref|XP_002873864.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319701|gb|EFH50123.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 788

 Score =  318 bits (815), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 218/603 (36%), Positives = 329/603 (54%), Gaps = 46/603 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLIS---HEFEASGFLDNVR 57
           +++   KL  ++   S+DVRMIGI G  G+GKTTIAR +Y+ +S    EF+ + F++NV+
Sbjct: 196 LEAHVAKLNSMLCLQSNDVRMIGIWGPIGIGKTTIARALYNQLSSDGDEFQQNLFMENVK 255

Query: 58  EISSKGGL------VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVV 111
             S +  L      + LQ + LS++    + +I      + +   RL+ +K L+V+DDV 
Sbjct: 256 RSSKRNKLDGYRLKLHLQERFLSEMFNQRNINI----SHLGVAQERLKNQKALIVLDDVD 311

Query: 112 DVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFK 171
           DV+QL +LA   +WFG+G+R+I+ + D+ LLK HG+D VY     + DEA  +F   AF 
Sbjct: 312 DVEQLHALADQTQWFGNGTRVIVITEDKQLLKAHGIDHVYDVCLPSKDEAFHIFCRFAFG 371

Query: 172 TYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDIL 231
                +    ++  + + AG LPL L +LG+ L G   DEW + L RL      +I  +L
Sbjct: 372 KTSAPEGYYDVAVEVAKLAGDLPLGLSILGASLRGMRKDEWINALPRLRTSLNGKIEKLL 431

Query: 232 QISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNN 290
              +DGL E +K +FL IAC F G   D V   L         G++VL ++ LI +  + 
Sbjct: 432 GACYDGLDEKDKALFLHIACLFNGEKVDRVKELLAISALDAEFGLKVLNDRSLIHICADG 491

Query: 291 TLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHE 350
            + MH LLQ++G++I + Q   + GK   +    E+  VL + TGT+ V GI LD    +
Sbjct: 492 YIVMHCLLQQMGKEITRGQCLHDPGKGKFIVDALEISDVLADETGTKTVLGISLDMSEID 551

Query: 351 NEVYLCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFL 402
            +VY+  S KAF KM NL+ L++ N          LP+GL+YL  +LRLL W  YP+K +
Sbjct: 552 GQVYI--SEKAFEKMPNLQFLRLYNSIPDKAAEFDLPHGLDYLPRKLRLLHWDSYPIKCM 609

Query: 403 PSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
           PS  + +  +E+ M  S++ +LW+GI+ L  LK M LS S N+  +P+ + A NLEKL L
Sbjct: 610 PSKFRPEFLVELTMRDSKLEKLWEGIQPLTSLKYMDLSASTNIGDIPNLSRAKNLEKLYL 669

Query: 463 EGCTRLYEIHPSLLLH-NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKC 521
             C  L  +  S L + NKL +L+M  C  L TLP  I ++SL  LNL+           
Sbjct: 670 RFCENLVTVPSSALQNLNKLKVLDMSCCIKLKTLPTNINLESLSVLNLR----------- 718

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
                  G  K + FP I   ++ +S   L  TAI  +P  I+L S LV L +  C++L 
Sbjct: 719 -------GCSKLKRFPFISTQIQFMS---LGETAIEKVPSQIKLCSRLVSLEMAGCKNLR 768

Query: 582 ILP 584
            +P
Sbjct: 769 TIP 771



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 83/149 (55%), Gaps = 7/149 (4%)

Query: 509 LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTA-IRGLPLS-IELL 566
           L+ L   I  L  L  +D+S      + P +    ++L +L+L     +  +P S ++ L
Sbjct: 628 LEKLWEGIQPLTSLKYMDLSASTNIGDIPNL-SRAKNLEKLYLRFCENLVTVPSSALQNL 686

Query: 567 SGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS 626
           + L +L++  C  L+ LP  + NL+ L  L L GCSKLK+FP I   ++ +S   L  T+
Sbjct: 687 NKLKVLDMSCCIKLKTLPTNI-NLESLSVLNLRGCSKLKRFPFISTQIQFMS---LGETA 742

Query: 627 IKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           I++VPS I+L ++L  L ++ CKNL  +P
Sbjct: 743 IEKVPSQIKLCSRLVSLEMAGCKNLRTIP 771



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 6/153 (3%)

Query: 549 LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
           LH +   I+ +P        LV L +++ + LE L   +  L  L+ + LS  + +   P
Sbjct: 599 LHWDSYPIKCMPSKFRP-EFLVELTMRDSK-LEKLWEGIQPLTSLKYMDLSASTNIGDIP 656

Query: 609 EIVRSMKDLSELFLD-GTSIKEVPSS-IELLTKLELLNLSDCKNLVRLPSSIIALKSLKT 666
            + R+ K+L +L+L    ++  VPSS ++ L KL++L++S C  L  LP++I  L+SL  
Sbjct: 657 NLSRA-KNLEKLYLRFCENLVTVPSSALQNLNKLKVLDMSCCIKLKTLPTNI-NLESLSV 714

Query: 667 LNLSGCFKLENVPETLGQIESLEELDISGTAVP 699
           LNL GC KL+  P    QI+ +   + +   VP
Sbjct: 715 LNLRGCSKLKRFPFISTQIQFMSLGETAIEKVP 747


>gi|15787887|gb|AAL07535.1| resistance gene analog PU3 [Helianthus annuus]
          Length = 770

 Score =  318 bits (815), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 208/523 (39%), Positives = 297/523 (56%), Gaps = 41/523 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +++R + L+  +   S DVR+IGI G+GG GKTT+A   Y  ISH FEA   L N+RE S
Sbjct: 259 IETRLQDLKSKLKMESGDVRIIGIWGVGGGGKTTLASAAYAEISHRFEAHCLLQNIREES 318

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +K GL  LQ ++LS +LK  D  + +  +G  M+  RL+ K VL+V+DDV D+KQL++LA
Sbjct: 319 NKHGLEKLQEKILSLVLKTKDVVVGSEIEGRSMIERRLRNKSVLVVLDDVDDLKQLEALA 378

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G+  WFG GSRIIIT+RDEHLL  H  D +Y+   L+ DEA++LFN  A++  + +++  
Sbjct: 379 GSHAWFGKGSRIIITTRDEHLLTRHA-DMIYEVSLLSDDEAMELFNKHAYREDELIEDYG 437

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            LS  ++ YA GLPLALE+LGSFL  ++ D+W+S L +L+  P  E+ + L+IS+DGL+ 
Sbjct: 438 MLSKDVVSYASGLPLALEILGSFLYDKNKDDWKSALAKLKCIPNVEVTERLKISYDGLEP 497

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN------NTLWM 294
             +K+FLDIACF++  D D     L+ C  HP IG++VLI+K LI V +          M
Sbjct: 498 EHQKLFLDIACFWRRRDMDEAMMVLDACNLHPRIGVKVLIQKSLIKVSDVRFSKQKVFDM 557

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           HDL++E+   IV+   P    K SR+WK E++                           Y
Sbjct: 558 HDLVEEMAHYIVRGAHPNHPEKHSRIWKMEDIA--------------------------Y 591

Query: 355 LCASAKAFSKMTNLRLLKICNLQLPN-----GLEYLSNRLRLLGW---RGYPLKFLPSNL 406
           LC   +    M    L   C +  P      G+  +   ++ L W     YP    PSN 
Sbjct: 592 LCDMGEDAVPMETEALAFRCYIDDPGLSNAVGVSDVVANMKKLPWIRFDEYPASSFPSNF 651

Query: 407 QMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
              +   + +  SR  ELW G K L  LK++ L+ S NLI  P+F G P LE+L LEGC 
Sbjct: 652 HPTELGCLELERSRQKELWHGYKLLPNLKILDLAMSSNLITTPNFDGLPCLERLDLEGCE 711

Query: 467 RLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNL 509
            L EIHPS+  H  L+ ++M+ C++L      I M+ LE L L
Sbjct: 712 SLEEIHPSIGYHKSLVYVDMRRCSTLKRFSPIIQMQMLETLIL 754


>gi|356558276|ref|XP_003547433.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1106

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 247/708 (34%), Positives = 379/708 (53%), Gaps = 57/708 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D     +  L+       R+IGI GMGG+GK+T+A  V + +   FE   FL N RE S
Sbjct: 186 IDEEIANVELLISKEPKKTRLIGIWGMGGIGKSTLAEKVLNKLRSGFEGCYFLANEREQS 245

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           ++ GL+SL+ ++ S+LL   D  I  ++   + +  R+   KVLL++DDV D+  L+ L 
Sbjct: 246 NRHGLISLKEKIFSELLGY-DVKIDTLYSLPEDIVRRISCMKVLLILDDVNDLDHLEKLL 304

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G  + FGSGSRII+T+RDE +LK + VDE+Y+    N+D+AL+ FN+  F      +E  
Sbjct: 305 GTLDNFGSGSRIIVTTRDEQVLKANKVDEIYRLREFNHDKALEFFNLNTFNQSDDQREYS 364

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            LS +++ YA G+PL L+VL   L GR  + W S L++L   PP+ + D +++S+D L  
Sbjct: 365 TLSEKVVDYARGIPLVLKVLAHLLRGRKKEIWESELDKLRRMPPTTVYDAMKLSYDDLDR 424

Query: 241 LEKKIFLDIACFFKGN----DRDYVTNFLEG--CGFHPVIGIRVLIEKCLITV-HNNTLW 293
            E+++FLD+ACFF  +    +   V + L+        V+G+  L +K LIT+  +N + 
Sbjct: 425 KEQQLFLDLACFFLRSHIIVNVSNVKSLLKDGESDNSVVVGLERLKDKALITISEDNCIS 484

Query: 294 MHDLLQELGQQIVQRQSPEELGKRSRLWK-EEEVCHVLTESTGTELVEGIVLDNYHHENE 352
           MHD LQE+  +IV+R+ PE    RS LW   +++   L     TE +  I + +     +
Sbjct: 485 MHDCLQEMAWEIVRREDPES---RSWLWDPNDDIYEALENDKCTEAIRSIRI-HLPTFKK 540

Query: 353 VYLCASAKAFSKMTNLRLLKI---------CNLQ---LPNGLEYLSNRLRLLGWRGYPLK 400
             LC     F+KM  L+ L+          C  Q   L  GL++L+  L+ L W  YPLK
Sbjct: 541 HKLCRH--IFAKMRRLQFLETSGEYRYNFDCFDQHDILAEGLQFLATELKFLCWYYYPLK 598

Query: 401 FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
            LP N   +K + + M   RI +LW G+K+L  LK + L  S+ L  +PD + A NLE L
Sbjct: 599 LLPENFSPEKLVILNMPGGRIEKLWHGVKNLVNLKQLDLGWSQMLKELPDLSKARNLEVL 658

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLK 520
           +L GC+ L  +HPS+    KL  L++ +C SL  L     + SL                
Sbjct: 659 LLGGCSMLSSVHPSIFSLPKLEKLDLWNCRSLTRLASDCHLCSL---------------- 702

Query: 521 CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL 580
           C   LD   +L   EF  I E+M+   EL L  T ++ LP +    S L  L+LK   ++
Sbjct: 703 CYLNLDYCKNLT--EFSLISENMK---ELGLRFTKVKALPSTFGCQSKLKSLHLKGS-AI 756

Query: 581 EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
           E LP +++NL  L  L++S C KL+   E+   ++ L   F   TS++ +    EL   L
Sbjct: 757 ERLPASINNLTQLLHLEVSRCRKLQTIAELPMFLETLDVYFC--TSLRTLQ---ELPPFL 811

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
           + LN+ DCK+L  L    +   SLKTLN+  C  L+ +P+    +E+L
Sbjct: 812 KTLNVKDCKSLQTLAELPL---SLKTLNVKECKSLQTLPKLPPLLETL 856



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 188/466 (40%), Gaps = 110/466 (23%)

Query: 496  PGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-T 554
            P K+++ ++    ++ L   +  L  L  LD+      +E P++ +   +L  L L G +
Sbjct: 606  PEKLVILNMPGGRIEKLWHGVKNLVNLKQLDLGWSQMLKELPDLSK-ARNLEVLLLGGCS 664

Query: 555  AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
             +  +  SI  L  L  L+L NCRSL  L  +  +L  L  L L  C  L +F  I  +M
Sbjct: 665  MLSSVHPSIFSLPKLEKLDLWNCRSLTRL-ASDCHLCSLCYLNLDYCKNLTEFSLISENM 723

Query: 615  KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
            K+L   F   T +K +PS+    +KL+ L+L     + RLP+SI  L  L  L +S C K
Sbjct: 724  KELGLRF---TKVKALPSTFGCQSKLKSLHLKGSA-IERLPASINNLTQLLHLEVSRCRK 779

Query: 675  LENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLN 734
            L+ + E    +E+L+        V   TS  +             +LP       L+ LN
Sbjct: 780  LQTIAELPMFLETLD--------VYFCTSLRT-----------LQELPPF-----LKTLN 815

Query: 735  LTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ 794
            + DC  ++                     +   LP S+    K LN++  +CK LQ+LP+
Sbjct: 816  VKDCKSLQ---------------------TLAELPLSL----KTLNVK--ECKSLQTLPK 848

Query: 795  LPPNIRQVRVNGCASLVTLLD------------------------ALKLCKSDSTMIACL 830
            LPP +  + V  C SL TL +                        A++  K + T +  L
Sbjct: 849  LPPLLETLYVRKCTSLQTLPELPCFVKTLYAIYCTSLKTVLFPSTAVEQLKENRTRVLFL 908

Query: 831  DSLKLLGNKSLAFSMLREYLEAVSNTRQHLSV-------------------------VVP 865
            + LK L   SL    L   +  +    QHLS                          + P
Sbjct: 909  NCLK-LDEHSLEAIGLTAQINVMKFANQHLSTPNHDHVENYNDYDYGDNHHSYQAVYLYP 967

Query: 866  GSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNS 911
            GS +PEW  Y+     I +   S  Y+   L+ +  C V    +++
Sbjct: 968  GSSVPEWMEYKTTKDYINIDLSSAPYS--PLLSFIFCFVLDKYRDT 1011


>gi|297805566|ref|XP_002870667.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316503|gb|EFH46926.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1104

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 217/598 (36%), Positives = 327/598 (54%), Gaps = 29/598 (4%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQ 75
           S DV+MIGI G  G+GKTT+AR +++ +S  F  S F+  + +++     + LQ +LLS+
Sbjct: 206 SDDVKMIGIWGPAGIGKTTLARALFNQLSTRFRRSCFMGTI-DVNDYDSKLCLQNKLLSK 264

Query: 76  LLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIIT 135
           +L   D  + +    +  +   L  ++VL+V+DDV D++QL+ LA    WFG GSRII+T
Sbjct: 265 ILNQKDMRVHH----LGAIKEWLHDQRVLIVLDDVDDLEQLEVLAKETSWFGPGSRIIVT 320

Query: 136 SRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPL 195
            +D+ +LK HG++++Y     +  EA ++F + AFK   P     +L+ +++   G LPL
Sbjct: 321 LKDKKILKAHGINDIYHVDYPSEKEAFEIFCLSAFKQSSPQDGFEELARKVVELCGNLPL 380

Query: 196 ALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKG 255
           AL V+GS   G S DEWR  L  +E     +I ++L++ +D L E  + +FL IACFF  
Sbjct: 381 ALRVVGSSFYGESEDEWRIQLYGIETNLDRKIENVLRVGYDKLSERHQSLFLHIACFFNH 440

Query: 256 NDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELG 315
              DYVT  L         G+  L  K L++  N  + MH LLQ+LG+Q+V +Q   + G
Sbjct: 441 KSVDYVTTMLADSVLDVENGLNTLAAKSLVST-NGWITMHCLLQQLGRQVVLQQG--DPG 497

Query: 316 KRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKIC- 374
           KR  L + +E+  VL   TGTE V GI  D    E    L  S +AF++M NL+ L    
Sbjct: 498 KRQFLVEAKEIRDVLANETGTESVIGISFDISKIE---ALSISKRAFNRMRNLKFLNFYN 554

Query: 375 -NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDK 433
            N+ L   +EYL  RLRLL W  YP K LP   + +  +E+YM  S++ +LW GI+ L  
Sbjct: 555 GNISLLEDMEYLP-RLRLLHWGSYPRKSLPLAFKPECLVELYMGSSKLEKLWGGIQPLTN 613

Query: 434 LKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLI 493
           LK + L +S NL  +P+ + A NL+ L L GC  L EI  S+L   KL +L    C+ L 
Sbjct: 614 LKKINLGYSSNLKEIPNLSKATNLKTLTLTGCESLVEIPSSILNLQKLEMLYASGCSKLQ 673

Query: 494 TLPGKILMKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKFREFP-EIVEHMEHL 546
            +P  I + SLE++N      L+S P   S +K    L V+G +  +EFP  IV     L
Sbjct: 674 VIPTNINLASLEEVNMSNCSRLRSFPDMSSNIK---RLYVAGTM-IKEFPASIVGQWCRL 729

Query: 547 SELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKL 604
             L +   + + L    E ++ L L N      ++++P  +  L  L SL +  C+KL
Sbjct: 730 DFLQIGSRSFKRLTHVPESVTHLDLRN----SDIKMIPDCIIGLSHLVSLLVENCTKL 783



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 148/317 (46%), Gaps = 61/317 (19%)

Query: 591 KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLTKLELLNLSDCK 649
           +CL  L + G SKL+K    ++ + +L ++ L  +S +KE+P+ +   T L+ L L+ C+
Sbjct: 589 ECLVELYM-GSSKLEKLWGGIQPLTNLKKINLGYSSNLKEIPN-LSKATNLKTLTLTGCE 646

Query: 650 NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIP 709
           +LV +PSSI+ L+ L+ L  SGC KL+ +P  +  + SLEE+++S  +   S        
Sbjct: 647 SLVEIPSSILNLQKLEMLYASGCSKLQVIPTNI-NLASLEEVNMSNCSRLRS-------- 697

Query: 710 INLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDI-GNLCSLKELYLSKNSFVSL 768
                       P +S   ++++L +    + E   P+ I G  C L  L +   SF  L
Sbjct: 698 -----------FPDMSS--NIKRLYVAGTMIKE--FPASIVGQWCRLDFLQIGSRSFKRL 742

Query: 769 ---PTSITH-----------------LSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCA 808
              P S+TH                 LS L+++ +E+C +L S+    P++  +  + C 
Sbjct: 743 THVPESVTHLDLRNSDIKMIPDCIIGLSHLVSLLVENCTKLVSIQGHSPSLVTLFADHCI 802

Query: 809 SLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSE 868
           SL ++  +     S S    CL              + +E    +     + S+ +PG E
Sbjct: 803 SLQSVCCSFHGPISKSMFYNCL-------------KLDKESKRGIIQQSGNKSICLPGKE 849

Query: 869 IPEWFMYQNEGSSITVT 885
           IP  F +Q  G+ IT++
Sbjct: 850 IPAEFTHQTSGNLITIS 866



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 66/156 (42%), Gaps = 48/156 (30%)

Query: 567 SGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIV--------------- 611
           + L  L L  C SL  +P ++ NL+ L  L  SGCSKL+  P  +               
Sbjct: 635 TNLKTLTLTGCESLVEIPSSILNLQKLEMLYASGCSKLQVIPTNINLASLEEVNMSNCSR 694

Query: 612 -RSMKDLS----ELFLDGTSIKEVPSSI------------------------ELLTKLEL 642
            RS  D+S     L++ GT IKE P+SI                        E +T L+L
Sbjct: 695 LRSFPDMSSNIKRLYVAGTMIKEFPASIVGQWCRLDFLQIGSRSFKRLTHVPESVTHLDL 754

Query: 643 LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
            N SD K    +P  II L  L +L +  C KL ++
Sbjct: 755 RN-SDIK---MIPDCIIGLSHLVSLLVENCTKLVSI 786


>gi|297811953|ref|XP_002873860.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319697|gb|EFH50119.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1168

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 232/722 (32%), Positives = 371/722 (51%), Gaps = 66/722 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +D R ++L   +  G  D  R+IG+ GM G+GKTT+ + +Y+ + +EF +   + ++ E 
Sbjct: 202 VDLRLKQLEEKLSFGFEDTTRIIGVVGMPGIGKTTLVKKLYEKLKNEFLSHVLILDIHET 261

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S + GL  L   LL  LLK+ +     V    +    +L + K L+++D V + +Q+ ++
Sbjct: 262 SREQGLSYLPTILLEDLLKVKNPMFETVQAAHEGYKDQLLKTKSLVILDHVSNKEQIAAI 321

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G  +W   GS+I+I + D  L+    VD++Y+   L+Y ++LQ F   A       Q  
Sbjct: 322 LGKCDWIKQGSKIVIATGDTSLIHDL-VDDIYQVPQLSYKDSLQQFTHYAIGDQSNAQSF 380

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLE--------------RLEIEPPS 225
           ++LS   + Y  G PLAL+VLG+ L G+    W S L+              ++  +  S
Sbjct: 381 LKLSIDFVHYTKGNPLALKVLGAELLGKDESLWNSKLDSLSQHHKGRARSSRKIRAQSSS 440

Query: 226 EILD-ILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPV---IGIRVLIE 281
           E+L  + +  +DGL + ++   LDIACF +  D++YV + L+    +     I I  L+ 
Sbjct: 441 EMLQSVWKECYDGLSQQQQDTLLDIACF-RSLDKNYVASLLDSHDANSTEARIEIEKLMN 499

Query: 282 KCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEG 341
           K LIT+    + MHD L    +++ +  +  +   R RLW    +  VL  + G   V  
Sbjct: 500 KFLITISAGKIEMHDTLHMFCKEVGREATAPDGKGRRRLWDYHTIIDVLENNKGVS-VRS 558

Query: 342 IVLD--NYHHENEVYLCASAKAFSKMTNLRLLKICN------------LQLPNGLEYLSN 387
           I LD  + +  N ++    ++AF+ M+N+R LKI N            L+ P+GLE   +
Sbjct: 559 IFLDLADLNMNNSLH----SQAFNLMSNIRFLKIYNTCCPQECDRDIMLKFPDGLELPFD 614

Query: 388 RLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIR 447
            LR L W  +PLK LP +      +++ + YS I  +W+G K   KLK +  +HS  L  
Sbjct: 615 ELRCLHWLKFPLKELPPDFDPKNLVDLKLHYSEIERVWEGNKDASKLKWIDFNHSRKLYT 674

Query: 448 MPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL 507
           +     A NL++L LEGC  L  +   +     L+ LN++ CTSL  LP         ++
Sbjct: 675 LSGLAEARNLQELNLEGCIALATLPQDMENMKCLVFLNLRGCTSLKYLP---------EI 725

Query: 508 NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
           NL SL T I          +S   KF+ F  I E +E    ++L+GTAI+ LP  I  L 
Sbjct: 726 NLISLETLI----------LSDCSKFKVFKVISEKLE---AIYLDGTAIKELPSDIRNLQ 772

Query: 568 GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSI 627
            LVLLN+K C+ L+ LP ++  LK L+ L LSGCSKL+ FPE+ ++M  L  L LD T+I
Sbjct: 773 RLVLLNMKGCKKLKTLPDSLGELKALQELILSGCSKLQSFPEVAKNMNRLEILLLDETAI 832

Query: 628 KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
           KE+P+    +  L  L LS  + + RLP +I     LK L++  C  L  +P+    ++ 
Sbjct: 833 KEMPN----IFSLRYLCLSRNEKICRLPENISQFSRLKWLDMKYCKSLTYLPKLPPNLQC 888

Query: 688 LE 689
           L+
Sbjct: 889 LD 890



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 124/375 (33%), Positives = 173/375 (46%), Gaps = 68/375 (18%)

Query: 545  HLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            +L EL+LEG  A+  LP  +E +  LV LNL+ C SL+ LP    NL  L +L LS CSK
Sbjct: 683  NLQELNLEGCIALATLPQDMENMKCLVFLNLRGCTSLKYLPEI--NLISLETLILSDCSK 740

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
             K F  I      L  ++LDGT+IKE+PS I  L +L LLN+  CK L  LP S+  LK+
Sbjct: 741  FKVFKVISEK---LEAIYLDGTAIKELPSDIRNLQRLVLLNMKGCKKLKTLPDSLGELKA 797

Query: 664  LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPS 723
            L+ L LSGC KL++ PE    +  LE L +  TA+    + +                 S
Sbjct: 798  LQELILSGCSKLQSFPEVAKNMNRLEILLLDETAIKEMPNIF-----------------S 840

Query: 724  LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIEL 783
            L  LC  R  N   C      LP +I     LK L                       ++
Sbjct: 841  LRYLCLSR--NEKICR-----LPENISQFSRLKWL-----------------------DM 870

Query: 784  EDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKS----DSTMIAC-LDSLKLLGN 838
            + CK L  LP+LPPN++ +  +GC+SL +++  L    +     ST I    D L+    
Sbjct: 871  KYCKSLTYLPKLPPNLQCLDAHGCSSLKSIVQPLAHVMATEHIHSTFIFTKCDKLEQAAK 930

Query: 839  KSLAFSMLRE---YLEAVSNTRQHL------SVVVPGSEIPEWFMYQNEGSSITVTRPSN 889
            + ++    R+      A+    + L      S   PG EIP WF +Q  GS +    P +
Sbjct: 931  EEISSYSQRKCQILPSALKLCNKDLVPEILFSTCFPGGEIPPWFYHQAIGSKVKFESPQH 990

Query: 890  LYNKKKLVGYAICCV 904
             +   KL G A C V
Sbjct: 991  -WKYNKLSGIAFCAV 1004


>gi|334182655|ref|NP_173203.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332191491|gb|AEE29612.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1049

 Score =  318 bits (814), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 265/836 (31%), Positives = 424/836 (50%), Gaps = 76/836 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M +  E L  L+D  S++V ++GI GMGG+GKT+I + +YD +S +F A  F++N++ +S
Sbjct: 187 MKAHMEGLNHLLDQESNEVLLVGIWGMGGIGKTSIVKCLYDQLSPKFPAHCFIENIKSVS 246

Query: 61  SKGG--LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
              G  L  LQ++LLS +L   D  +W+V  G   +  RL  +KV LV+D V  V Q+ +
Sbjct: 247 KDNGHDLKHLQKELLSSIL-CDDIRLWSVEAGCQEIKKRLGNQKVFLVLDGVDKVAQVHA 305

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFK-TYQPLQ 177
           LA  + WFG GSRIIIT+RD  LL T GV+ VY+   L+  +ALQ+F   AF+    P +
Sbjct: 306 LAKEKNWFGPGSRIIITTRDMGLLNTCGVEVVYEVKCLDDKDALQMFKQIAFEGGLPPCE 365

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSV--DEWRSTLERLEIEPPSEILDILQISF 235
              QLS R  + A GLP A++    FL GR+   +EW   L  LE      I++IL+IS+
Sbjct: 366 GFDQLSIRASKLAHGLPSAIQAYALFLRGRTASPEEWEEALGALESSLDENIMEILKISY 425

Query: 236 DGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWM 294
           +GL +  + +FL + C F G+    +T+ L G      + IRVL EK LI +  N ++ M
Sbjct: 426 EGLPKPHQNVFLHVVCLFNGDTLQRITSLLHGPIPQSSLWIRVLAEKSLIKISTNGSVIM 485

Query: 295 HDLLQELGQQIVQRQSPEELG-KRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
           H L++++G++I++    +++   R  L    E+   L    G E  E + L  +  +   
Sbjct: 486 HKLVEQMGREIIR----DDMSLARKFLRDPMEIRVALAFRDGGEQTECMCL--HTCDMTC 539

Query: 354 YLCASAKAFSKMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSN 405
            L   A    +M NL+ LK+         NLQL     +L   LRL  W  +PL+ LPS 
Sbjct: 540 VLSMEASVVGRMHNLKFLKVYKHVDYRESNLQLIPDQPFLPRSLRLFHWDAFPLRALPSG 599

Query: 406 LQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
                 +E+ + +S +  LW G   L  LK + ++ S++L ++PD +   +LE+L+LE C
Sbjct: 600 SDPCFLVELNLRHSDLETLWSGTPMLKSLKRLDVTGSKHLKQLPDLSSITSLEELLLEQC 659

Query: 466 TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK-SLPTTISGLKCLST 524
           TRL  I   +   + L  L +       +     L KS  + ++    P     +  L  
Sbjct: 660 TRLEGIPECIGKRSTLKKLKLSYRGGRRSALRFFLRKSTRQQHIGLEFPDAKVKMDALIN 719

Query: 525 LDVSGDLKFR---EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
           + + GD+ F    +F    E++   SE              I ++S +         SL+
Sbjct: 720 ISIGGDITFEFRSKFRGYAEYVSFNSEQQ------------IPIISAM---------SLQ 758

Query: 582 ILPVTVS---NLKCLRSLKLSGCSKLKKFP-EIVRSMKDLSELFLDGTSIKEVPSSIELL 637
             P  +S       LR ++ S     + F  ++     DL EL L   +I+++PS I  L
Sbjct: 759 QAPWVISECNRFNSLRIMRFSHKENGESFSFDVFPDFPDLKELKLVNLNIRKIPSGICHL 818

Query: 638 TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA 697
             LE L+LS   +   LP ++ +L  LKTL L  CFKL+ +P+ L Q+++L   +     
Sbjct: 819 DLLEKLDLSG-NDFENLPEAMSSLSRLKTLWLQNCFKLQELPK-LTQVQTLTLTNCR--- 873

Query: 698 VPHSTSWYSYIPINLMRKSVALKLPSLS---GLCSLRKLNLTDCNLMEGALPSDIGNLCS 754
                        NL  +S+A KL + S   G   L +L L +C  +E +L   + +   
Sbjct: 874 -------------NL--RSLA-KLSNTSQDEGRYCLLELCLENCKSVE-SLSDQLSHFTK 916

Query: 755 LKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
           L  L LS + F +LP+SI  L+ L+ + L +CK+L+S+ +LP +++ +  +GC SL
Sbjct: 917 LTCLDLSNHDFETLPSSIRDLTSLVTLCLNNCKKLKSVEKLPLSLQFLDAHGCDSL 972


>gi|147799796|emb|CAN70507.1| hypothetical protein VITISV_024109 [Vitis vinifera]
          Length = 1350

 Score =  317 bits (813), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 203/507 (40%), Positives = 298/507 (58%), Gaps = 31/507 (6%)

Query: 106 VIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLF 165
           V D  V    L+ LA  ++WF + S IIITSRD+ +L  +G D  Y+   LN +EA++LF
Sbjct: 165 VNDQGVLHNALEYLAEEKDWFWAKSIIIITSRDKQVLAQYGADIPYEVSKLNKEEAIKLF 224

Query: 166 NMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPS 225
           ++ AFK  +P +    LS  II YA GLPLAL+VLG+ L G+ +  W S L +L+I P  
Sbjct: 225 SLWAFKQNRPKEVYKNLSYNIIDYANGLPLALKVLGASLFGKKISNWESALCKLKIIPHM 284

Query: 226 EILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLI 285
           EI ++L+ISFDGL +++K IFLD+ACFFKG++RD+V+  L   G H    I  L ++CLI
Sbjct: 285 EIHNVLRISFDGLDDIDKGIFLDVACFFKGDNRDFVSRIL---GPHAEHAITTLDDRCLI 341

Query: 286 TVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD 345
           TV  N L +HDL+Q++G +I++++ PE+ G+RSRL  +    HVLT + GT  +EG+ LD
Sbjct: 342 TVSENMLDVHDLIQQMGWEIIRQECPEDPGRRSRLC-DSNAYHVLTGNKGTRAIEGLFLD 400

Query: 346 N-YHHENEVYLCASAKAFSKMTNLRLLKICNL--------QLPNGLEYLSNRLRLLGWRG 396
               + +E+    + ++F +M  LRLLKI N          LP   E+ S  L  L W G
Sbjct: 401 RCKFNPSEL----TTESFKEMNRLRLLKIHNPHRKLFLKDHLPRDFEFYSYELAYLHWDG 456

Query: 397 YPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPN 456
           YPL+ LP N      +E+ +  S I ++WKG K  DKL+V+ LSHS +L R+PDF+  PN
Sbjct: 457 YPLESLPINFHAKNLVELSLRDSNIKQVWKGNKLHDKLRVIDLSHSVHLKRIPDFSSVPN 516

Query: 457 LEKLILEGC-TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKIL----MKSL---EKLN 508
           LE L L+GC TR ++     +   +++ L+    T+++ LP  I     +++L   E L 
Sbjct: 517 LEILTLKGCTTRDFQKSKGDMREQRVLDLSG---TAIMDLPSSITHLNGLQTLLLQECLK 573

Query: 509 LKSLPTTISGLKCLSTLDVSGDLKFRE--FPEIVEHMEHLSELHLEGTAIRGLPLSIELL 566
           L  +P  I  L  L  LD+ G     E   P  + H+  L +L+LE      +P +I  L
Sbjct: 574 LHQVPNHICHLSSLKVLDL-GHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQL 632

Query: 567 SGLVLLNLKNCRSLEILPVTVSNLKCL 593
           S L +LNL +C +LE +P   S L+ L
Sbjct: 633 SRLEVLNLSHCNNLEQIPELPSRLRLL 659



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 150/486 (30%), Positives = 227/486 (46%), Gaps = 86/486 (17%)

Query: 551  LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI 610
             +G+ +  +P+ IE  S L  L L++CR+L  LP ++   K L +L  SGCS+L+ FPEI
Sbjct: 931  FKGSDMNEVPI-IENPSELDSLCLQDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEI 989

Query: 611  VRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLS 670
            ++ M+ L +L+L+GT+IKE+PSSI+ L  L+ L L +CKNLV LP SI  L S KTL +S
Sbjct: 990  LQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVS 1049

Query: 671  GCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSL 730
             C     +P+ LG+++SLE L +                      S+  +LPSLSGLCSL
Sbjct: 1050 RCPNFNKLPDNLGRLQSLEYLFVGHL------------------DSMNFQLPSLSGLCSL 1091

Query: 731  RKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQ 790
            R L L DCNL E   P        +K +   +     +P  I+ L  L +++L  CK LQ
Sbjct: 1092 RTLKLQDCNLRE--FP-------PVKSITYHQ---CRIPDGISQLYNLKDLDLGHCKMLQ 1139

Query: 791  SLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYL 850
             +P+LP  +R +  + C SL  L     L    S++  C  S ++ G         RE+ 
Sbjct: 1140 HIPELPSRLRCLDAHHCTSLENLSSRSNLLW--SSLFKCFKS-RIQG---------REFR 1187

Query: 851  EAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKN 910
            + +      ++ +     IPEW  +Q  G  IT+  P + Y     +G+ +C +   L  
Sbjct: 1188 KTL------ITFIAESYGIPEWISHQKSGFKITMKLPWSWYENDDFLGFVLCSLHVPLDT 1241

Query: 911  SRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQ---TCYD----- 962
                +          NC +                  D  +  Y S Q    CYD     
Sbjct: 1242 ETAKH-------RSFNCKLNF--------------DHDSAYFSYQSHQFCEFCYDEDASS 1280

Query: 963  ----IRLPLESNLEPFESNH---VNVSFEPWLG-QGLEVKMCGLHPVYMDEVEELDQTTN 1014
                I  P  S  + + SN    +N SF  + G + ++V  CG H +Y  + E+ + T  
Sbjct: 1281 QGCLIYYPKSSIPKRYHSNEWRTLNASFNVYFGVKPVKVARCGFHFLYAHDYEQNNLTIV 1340

Query: 1015 QPSRFT 1020
            Q    T
Sbjct: 1341 QRKAVT 1346



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 156/297 (52%), Gaps = 21/297 (7%)

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
           K+L EL L  ++IK+V    +L  KL +++LS   +L R+P    ++ +L+ L L GC  
Sbjct: 469 KNLVELSLRDSNIKQVWKGNKLHDKLRVIDLSHSVHLKRIPD-FSSVPNLEILTLKGC-T 526

Query: 675 LENVPETLGQIESLEELDISGTAV---PHSTSWYSYIPINLMRKSVAL-KLPS-LSGLCS 729
             +  ++ G +     LD+SGTA+   P S +  + +   L+++ + L ++P+ +  L S
Sbjct: 527 TRDFQKSKGDMREQRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQVPNHICHLSS 586

Query: 730 LRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRL 789
           L+ L+L  CN+MEG +PSDI +L SL++L L +  F S+PT+I  LS+L  + L  C  L
Sbjct: 587 LKVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCNNL 646

Query: 790 QSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREY 849
           + +P+LP  +R +  +G     +    L L     +++ C          S A    R  
Sbjct: 647 EQIPELPSRLRLLDAHGSNRTSSRAPFLPL----HSLVNCF---------SWAQDSKRTS 693

Query: 850 LEAVSNTRQHLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
               S   +   +V+P ++ IPEW MY++         P N +   + +G+AICCV+
Sbjct: 694 FSDSSYHAKGTCIVLPRTDGIPEWIMYRSTIYFTKTKLPQNWHQNNEFLGFAICCVY 750



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 109/197 (55%), Gaps = 17/197 (8%)

Query: 508  NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
            NL SLP++I G K L+TL  SG  +   FPEI++ ME L +L+L GTAI+ +P SI+ L 
Sbjct: 958  NLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLR 1017

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF---LDG 624
            GL  L L+NC++L  LP ++ NL   ++L +S C    K P+ +  ++ L  LF   LD 
Sbjct: 1018 GLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEYLFVGHLDS 1077

Query: 625  TSIKEVPSSIELLTKLELLNLSDCK------------NLVRLPSSIIALKSLKTLNLSGC 672
             +  ++P S+  L  L  L L DC             +  R+P  I  L +LK L+L  C
Sbjct: 1078 MNF-QLP-SLSGLCSLRTLKLQDCNLREFPPVKSITYHQCRIPDGISQLYNLKDLDLGHC 1135

Query: 673  FKLENVPETLGQIESLE 689
              L+++PE   ++  L+
Sbjct: 1136 KMLQHIPELPSRLRCLD 1152



 Score = 40.4 bits (93), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 30/197 (15%)

Query: 399  LKFLPSNLQ-MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPN 456
            L+  P  LQ M+   ++Y+  + I E+   I+ L  L+ ++L + +NL+ +P+      +
Sbjct: 983  LESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTS 1042

Query: 457  LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
             + L++  C             NKL   N+    SL  L     +  L+ +N + LP ++
Sbjct: 1043 FKTLVVSRCPNF----------NKLPD-NLGRLQSLEYL----FVGHLDSMNFQ-LP-SL 1085

Query: 517  SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
            SGL  L TL +  D   REFP +     H             +P  I  L  L  L+L +
Sbjct: 1086 SGLCSLRTLKLQ-DCNLREFPPVKSITYHQCR----------IPDGISQLYNLKDLDLGH 1134

Query: 577  CRSLEILPVTVSNLKCL 593
            C+ L+ +P   S L+CL
Sbjct: 1135 CKMLQHIPELPSRLRCL 1151


>gi|297836396|ref|XP_002886080.1| hypothetical protein ARALYDRAFT_480565 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331920|gb|EFH62339.1| hypothetical protein ARALYDRAFT_480565 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1098

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 232/710 (32%), Positives = 361/710 (50%), Gaps = 94/710 (13%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M++  +++  L+D     V+++GI G  G+GKTTIAR ++ LI ++F+ + F++N+    
Sbjct: 188 MEAHLKEIELLLDVDYDGVKVVGIFGPAGIGKTTIARALHSLIFNKFQLTCFVENLSGSY 247

Query: 61  SKG----GL-VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQ 115
           S G    GL + LQ  LLS++LKL    I +    +  +  RL   KVL+V+DDV DVKQ
Sbjct: 248 SIGLDEYGLKLRLQEHLLSKILKLDGMRISH----LGAVKERLFDMKVLIVLDDVNDVKQ 303

Query: 116 LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP 175
           L++LA +  WFG GSR+I+T+ ++ +L+ HG+D  Y     + ++A+++    AFK   P
Sbjct: 304 LEALANDTTWFGPGSRVIVTTENKEILQRHGIDNTYHVGFPSDEKAIEILCRYAFKQSSP 363

Query: 176 LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
            +    L+  +    G LPL L V+GS L G++ DEW S + RLE     +I ++L++ +
Sbjct: 364 RRGFKYLAKNVTWLCGNLPLGLRVVGSSLHGKNEDEWVSVIRRLETIIDRDIEEVLRVGY 423

Query: 236 DGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWM 294
           + L E E+ +FL IA FF   D D V   L         G+++++ K LI V  N  + M
Sbjct: 424 ESLHENEQSLFLHIAVFFNNKDVDLVKAMLADDNLDIAHGLKIMVNKSLIYVSTNGEIRM 483

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           H LLQ++G+Q + RQ P    KR  L   +E+CHVL    GT +V GI  D     +EV 
Sbjct: 484 HKLLQQVGKQAINRQEP---WKRLILTNAQEICHVLENDKGTGVVSGISFDT-SGISEVI 539

Query: 355 LCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNL 406
           L  S +A  +M NLR L +          + +P+ +++   RLRLL W  YP K LP   
Sbjct: 540 L--SNRALRRMCNLRFLSVYKTRHDGNDIMHIPDDMKF-PPRLRLLHWEAYPSKSLPLGF 596

Query: 407 QMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
            ++  +E+ M  S++ +LW+G + L  LK M LS S +L  +PD + A NLE+L L  C 
Sbjct: 597 CLENLVELNMKDSQLEKLWEGTQLLRNLKKMDLSRSVHLKELPDLSNATNLERLELGDCM 656

Query: 467 RLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLD 526
            L E+  S+   +KL  L M +C SL  +P  I + SLE + +                 
Sbjct: 657 ALVELPTSIGNLHKLENLVMSNCISLEVIPTHINLASLEHITM----------------- 699

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL------ 580
            +G  + + FP+   ++E L    L GT++  +P SI   S L    +K+  SL      
Sbjct: 700 -TGCSRLKTFPDFSTNIERLL---LRGTSVEDVPASISHWSRLSDFCIKDNGSLKSLTHF 755

Query: 581 --------------EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS 626
                         E +P  +     L+SL ++GC KL                    TS
Sbjct: 756 PERVELLTLSYTDIETIPDCIKGFHGLKSLDVAGCRKL--------------------TS 795

Query: 627 IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
           + E+P S+ LL  L+  +L      +  PS+         LN + CFKL+
Sbjct: 796 LPELPMSLGLLVALDCESLEIVTYPLNTPSA--------RLNFTNCFKLD 837



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 156/364 (42%), Gaps = 48/364 (13%)

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
           P+ ++    L  LH E    + LPL    L  LV LN+K+ + LE L      L+ L+ +
Sbjct: 570 PDDMKFPPRLRLLHWEAYPSKSLPLGF-CLENLVELNMKDSQ-LEKLWEGTQLLRNLKKM 627

Query: 597 KLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPS 656
            LS    LK+ P++  +                        T LE L L DC  LV LP+
Sbjct: 628 DLSRSVHLKELPDLSNA------------------------TNLERLELGDCMALVELPT 663

Query: 657 SIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSY-IPINLMRK 715
           SI  L  L+ L +S C  LE +P  +  + SLE + ++G +   +   +S  I   L+R 
Sbjct: 664 SIGNLHKLENLVMSNCISLEVIPTHI-NLASLEHITMTGCSRLKTFPDFSTNIERLLLRG 722

Query: 716 SVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITH 774
           +    +P S+S    L    + D     G+L S       ++ L LS     ++P  I  
Sbjct: 723 TSVEDVPASISHWSRLSDFCIKD----NGSLKSLTHFPERVELLTLSYTDIETIPDCIKG 778

Query: 775 LSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLK 834
              L ++++  C++L SLP+LP ++  +    C SL  +   L    +      C     
Sbjct: 779 FHGLKSLDVAGCRKLTSLPELPMSLGLLVALDCESLEIVTYPLNTPSARLNFTNCFK--- 835

Query: 835 LLGNKSLAFSMLR---EYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLY 891
            L  +S    + R   ++L+  S         +PG  +P  F ++  G+S+T+   S++ 
Sbjct: 836 -LDEESRRLIIQRCATQFLDGFS--------CLPGRVMPNEFNHRTTGNSLTIRLSSSVS 886

Query: 892 NKKK 895
            K K
Sbjct: 887 FKFK 890


>gi|297794605|ref|XP_002865187.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311022|gb|EFH41446.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1162

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 258/797 (32%), Positives = 392/797 (49%), Gaps = 98/797 (12%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M+    K+  L+   S +VRM+GI G  G+GKT+IARV+Y  +SH F++S F+D  R   
Sbjct: 189 MEDHIAKMSALLHLESKEVRMVGIWGSSGIGKTSIARVLYSRLSHRFQSSVFVD--RAFI 246

Query: 61  SKGGLV-------------SLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVI 107
           SK   +              LQ+  LS++L   D  I +    +  +  RL+  KVL+ I
Sbjct: 247 SKSTEIYNSANSDDYNMKLHLQKVFLSKILDKKDIKIHH----LGAVEERLKHHKVLIFI 302

Query: 108 DDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNM 167
           DD+ D   L +LAG  +WFG GSRII+ ++D+H L+ HG++ +Y     + + AL++F  
Sbjct: 303 DDLDDQVVLDTLAGLTQWFGYGSRIIVITKDKHFLRAHGIEYIYNVCLPSNELALKIFCR 362

Query: 168 KAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEI 227
            AF+   P    ++L++ +   AG LPL L VLGS L GR  ++    L RL      +I
Sbjct: 363 SAFRKNYPPDGLMELASEVALCAGNLPLGLNVLGSHLRGRDKEDLMDMLPRLRNGLDGKI 422

Query: 228 LDILQISFDGL-QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLIT 286
              L++S++GL  + +K IF  IAC F G   D +   L   G    IG++ L++K LI 
Sbjct: 423 EKTLRVSYNGLNNQKDKAIFRHIACLFNGEKVDDIKLLLADSGLDVNIGLKNLVDKSLIH 482

Query: 287 VHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDN 346
           V    + MH LLQE+G++IV+ QS  E G+R  L   +++C +L +STGT+ V GI LD 
Sbjct: 483 VREEIVEMHSLLQEMGKEIVRSQS-NEPGEREFLMDAKDICDLLEDSTGTKKVLGITLD- 540

Query: 347 YHHENEVYLCASAKAFSKMTNLRLLKI----------CNLQLPNGLEYLSNRLRLLGWRG 396
               +E+++     AF  M NL  LK+              LP G  YL ++LR L   G
Sbjct: 541 MDEIDELHI--HENAFKGMHNLLFLKVYTKKWDKKTEVRWHLPKGFNYLPHKLRFLRLDG 598

Query: 397 YPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPN 456
           YP++ +PS  + +  +++ M  S++  LW+G+     L+ + L  SENL  +PD + A +
Sbjct: 599 YPMRCMPSKFRPENLVKLEMSGSKLERLWEGVHSFRGLRDIDLQKSENLKEIPDLSMATS 658

Query: 457 LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LK 510
           L+ L L  C+ L E+  S+   NKL  L M  C +L  LP  I +KSL +LN      LK
Sbjct: 659 LKTLNLCDCSNLVELPLSIQYLNKLEKLEMSGCINLENLPIGINLKSLGRLNLGGCSRLK 718

Query: 511 SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG----------------- 553
             P   + +  L  LD +G   F     +     HL E+  E                  
Sbjct: 719 IFPDISTNISWL-ILDETGIETFPSNLPLENLFLHLCEMKSEKLWGRVQQPLTPLMTILP 777

Query: 554 -----------TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
                       ++  LP SI+  + L  L ++NC +LE LP  + N   L  L L GCS
Sbjct: 778 HSLARLFLSDIPSLVELPASIQNFTKLNRLAIENCINLETLPSGI-NFPLLLDLDLRGCS 836

Query: 603 KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
           +L+ FP+I  ++  L+   +  T I+EVP  IE  +           NLVRL        
Sbjct: 837 RLRTFPDISTNIYMLN---VPRTGIEEVPWWIEKFS-----------NLVRLC------- 875

Query: 663 SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLM-RKSVALKL 721
                 + GC KL+ V   + +++ L ++D S        SW     +  M   ++  KL
Sbjct: 876 ------MGGCNKLQCVSLHISKLKHLGDVDFSDCGALTKASWIDSSSVEPMASDNIQSKL 929

Query: 722 PSLSGLCSLRKLNLTDC 738
           P L  + S    NL +C
Sbjct: 930 PFLGEVPSSFPDNLINC 946



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 121/241 (50%), Gaps = 28/241 (11%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNL 651
           L  L++SG SKL++  E V S + L ++ L  + ++KE+P  + + T L+ LNL DC NL
Sbjct: 613 LVKLEMSG-SKLERLWEGVHSFRGLRDIDLQKSENLKEIPD-LSMATSLKTLNLCDCSNL 670

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA-------VPHSTSW 704
           V LP SI  L  L+ L +SGC  LEN+P  +  ++SL  L++ G +       +  + SW
Sbjct: 671 VELPLSIQYLNKLEKLEMSGCINLENLPIGI-NLKSLGRLNLGGCSRLKIFPDISTNISW 729

Query: 705 -------YSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKE 757
                      P NL  +++ L L  +       ++      LM   LP       SL  
Sbjct: 730 LILDETGIETFPSNLPLENLFLHLCEMKSEKLWGRVQQPLTPLMT-ILPH------SLAR 782

Query: 758 LYLSK-NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP--PNIRQVRVNGCASLVTLL 814
           L+LS   S V LP SI + +KL  + +E+C  L++LP     P +  + + GC+ L T  
Sbjct: 783 LFLSDIPSLVELPASIQNFTKLNRLAIENCINLETLPSGINFPLLLDLDLRGCSRLRTFP 842

Query: 815 D 815
           D
Sbjct: 843 D 843


>gi|39104560|dbj|BAC41800.2| putative disease resistance protein [Arabidopsis thaliana]
          Length = 977

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 217/598 (36%), Positives = 326/598 (54%), Gaps = 29/598 (4%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQ 75
           S DV+MIGI G  G+GKTTIAR +++ +S  F  S F+  + +++     + LQ +LLS+
Sbjct: 76  SDDVKMIGIWGPAGIGKTTIARALFNQLSTGFRLSCFMGTI-DVNDYDSKLCLQNKLLSK 134

Query: 76  LLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIIT 135
           +L   D  I +    +  +   L  ++VL+V+DDV D++QL+ LA    WFG GSRII++
Sbjct: 135 ILNQKDMKIHH----LGAIEEWLHNQRVLIVLDDVDDLEQLEVLAKESSWFGHGSRIIVS 190

Query: 136 SRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPL 195
             D  +LK HG++++Y     + +EAL++  + AFK   P     +++ R++   G LPL
Sbjct: 191 LNDRKILKAHGINDIYDVDFPSEEEALEILCLSAFKQNSPQDGFEEVAKRVVELCGKLPL 250

Query: 196 ALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKG 255
            L V+GS   G S DEWR  L  +E     +I ++L++ +D L E  + +FL IACFF  
Sbjct: 251 GLRVVGSSFYGESEDEWRIQLYGIETNLDRKIENVLRVGYDKLSERHQSLFLHIACFFNH 310

Query: 256 NDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELG 315
              DYVT  L         G++ L  K L++  N  + MH LLQ+LG+Q+V +Q   + G
Sbjct: 311 KSVDYVTTMLADSTLDVENGLKTLAAKSLVST-NGWITMHCLLQQLGRQVVVQQG--DPG 367

Query: 316 KRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICN 375
           KR  L + +E+  VL    GTE V GI  D    E    L  S +AF++M NL+ L   N
Sbjct: 368 KRQFLVEAKEIRDVLANEKGTESVIGISFDISKIET---LSISKRAFNRMRNLKFLNFYN 424

Query: 376 --LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDK 433
             + L   +EYL  RLRLL W  YP K LP   + +  +E+YM +S++ +LW GI+ L  
Sbjct: 425 GSVSLLEDMEYLP-RLRLLYWGSYPRKSLPLTFKPECLVELYMGFSKLEKLWGGIQPLTN 483

Query: 434 LKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLI 493
           LK + L +S NL  +P+ + A NL+ L L GC  L EI  S+    KL +L    C  L 
Sbjct: 484 LKKINLGYSSNLKEIPNLSKATNLKTLTLTGCESLVEIPSSIWNLQKLEMLYASGCIKLQ 543

Query: 494 TLPGKILMKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKFREFP-EIVEHMEHL 546
            +P  I + SLE++N      L+S P   S +K    L V+G +  +EFP  IV H   L
Sbjct: 544 VIPTNINLASLEEVNMSNCSRLRSFPDISSNIK---RLYVAGTM-IKEFPASIVGHWCRL 599

Query: 547 SELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKL 604
             L +   +++ L    E ++ L L N      ++++P  V  L  L SL +  C+KL
Sbjct: 600 DFLQIGSRSLKRLTHVPESVTHLDLRN----SDIKMIPDCVIGLPHLVSLLVENCTKL 653



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 157/360 (43%), Gaps = 65/360 (18%)

Query: 583 LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLTKLE 641
           LP+T    +CL  L + G SKL+K    ++ + +L ++ L  +S +KE+P+ +   T L+
Sbjct: 452 LPLTFKP-ECLVELYM-GFSKLEKLWGGIQPLTNLKKINLGYSSNLKEIPN-LSKATNLK 508

Query: 642 LLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHS 701
            L L+ C++LV +PSSI  L+ L+ L  SGC KL+ +P  +  + SLEE+++S  +   S
Sbjct: 509 TLTLTGCESLVEIPSSIWNLQKLEMLYASGCIKLQVIPTNI-NLASLEEVNMSNCSRLRS 567

Query: 702 TSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDI-GNLCSLKELYL 760
              +  I  N+ R  VA                      M    P+ I G+ C L  L +
Sbjct: 568 ---FPDISSNIKRLYVA--------------------GTMIKEFPASIVGHWCRLDFLQI 604

Query: 761 SKNSFVSL---PTSITHLS-----------------KLLNIELEDCKRLQSLPQLPPNIR 800
              S   L   P S+THL                   L+++ +E+C +L S+    P++ 
Sbjct: 605 GSRSLKRLTHVPESVTHLDLRNSDIKMIPDCVIGLPHLVSLLVENCTKLVSIQGHSPSLV 664

Query: 801 QVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHL 860
            +  + C SL ++  +     S      CL              + +E    +     + 
Sbjct: 665 TLFADHCISLKSVCCSFHGPISKLMFYNCL-------------KLDKESKRGIIQQSGNK 711

Query: 861 SVVVPGSEIPEWFMYQNEGSSITVT-RPSNLYNKKKLVGYAICCVFHVLKNSRGN--NCF 917
           S+ +PG EIP  F +Q  G+ IT++  P           +  C +   +KN   N  NCF
Sbjct: 712 SICLPGKEIPAEFTHQTIGNLITISLAPGCEEAYSTFSRFKACLLLSPIKNFAFNKINCF 771



 Score = 42.4 bits (98), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 52/214 (24%)

Query: 510 KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTA-IRGLPLSIELLSG 568
           KSLP T    +CL  L + G  K  +    ++ + +L +++L  ++ ++ +P ++   + 
Sbjct: 450 KSLPLTFKP-ECLVELYM-GFSKLEKLWGGIQPLTNLKKINLGYSSNLKEIP-NLSKATN 506

Query: 569 LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIV----------------R 612
           L  L L  C SL  +P ++ NL+ L  L  SGC KL+  P  +                R
Sbjct: 507 LKTLTLTGCESLVEIPSSIWNLQKLEMLYASGCIKLQVIPTNINLASLEEVNMSNCSRLR 566

Query: 613 SMKDLS----ELFLDGTSIKEVPSSI------------------------ELLTKLELLN 644
           S  D+S     L++ GT IKE P+SI                        E +T L+L N
Sbjct: 567 SFPDISSNIKRLYVAGTMIKEFPASIVGHWCRLDFLQIGSRSLKRLTHVPESVTHLDLRN 626

Query: 645 LSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
            SD K    +P  +I L  L +L +  C KL ++
Sbjct: 627 -SDIK---MIPDCVIGLPHLVSLLVENCTKLVSI 656


>gi|297838205|ref|XP_002886984.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332825|gb|EFH63243.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 987

 Score =  316 bits (810), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 246/707 (34%), Positives = 363/707 (51%), Gaps = 81/707 (11%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI--------SSKGGLVS 67
           S +VRMIGI G  G+GKTTIARV++   S  FE S F++NV+++              + 
Sbjct: 215 SDEVRMIGIWGPSGIGKTTIARVLFSQFSGTFELSVFMENVKDLMYTRPVCSDDYSAKIH 274

Query: 68  LQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFG 127
           LQ+Q +SQ++   D  I      + ++  RL+ KKV +V+D++    QL ++A    WFG
Sbjct: 275 LQKQFMSQIINHKDIEI----PHLGVVEDRLKDKKVFIVLDNIDQSIQLDAIAKETRWFG 330

Query: 128 SGSRIIITSRDEHLLKTH-GVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARI 186
            GSRIIIT++D  LLK H G++++YK    +  EA Q+F M AF    P     +L+  +
Sbjct: 331 CGSRIIITTQDRKLLKAHDGINDIYKVDFPSAYEACQIFCMYAFGQNFPKDGFEELAWEV 390

Query: 187 IRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIF 246
            R  GGLPL L V+GS   G S  EW + L RL     + I  IL+ S++ L E +K +F
Sbjct: 391 ARLLGGLPLGLRVMGSHFKGMSKHEWINALPRLRTRLDANIQSILKFSYNALCEEDKDLF 450

Query: 247 LDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIV 306
           L IAC F     + V   L         GI VL EK LI++    + MH+LL++L ++IV
Sbjct: 451 LQIACLFNNKRIEKVEEHLAEKSLDVRQGIHVLAEKSLISIEEGRIKMHNLLEKLAKEIV 510

Query: 307 Q----RQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAF 362
           +     QS  E GKR  L    ++C +LT  TG++ V GI    Y  E    L  S +AF
Sbjct: 511 RHKPGHQSIREPGKRQFLVHATDICEILTNDTGSKSVIGIHF--YSSELSSELNISERAF 568

Query: 363 SKMTNLRLLKIC--------NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
             M+NL+ L+           L LP GL YLS +L++L W  +PL  +PSN   +  +E+
Sbjct: 569 EGMSNLKFLRFYYRYGDRSDKLYLPQGLNYLSRKLKILEWDRFPLTCMPSNFCTEYLVEL 628

Query: 415 YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
            M +S++ +LW G   L  LK M L+HS+ L  +PD + A NL++L L  C+ L E+  S
Sbjct: 629 NMRFSKLHKLWDGNMPLANLKWMYLNHSKILKELPDLSTATNLQELFLVKCSSLVELPSS 688

Query: 475 LLLHNKLIILNMKDCTSLITLPGKI-LMKSLEKLNLKS------LPTTISGLKCLSTLDV 527
           +     L  L +  CTSL+ LP  I  +  L+KL L        LP  I+ L+ L  LD+
Sbjct: 689 IGKATNLQKLYLNMCTSLVELPSSIGNLHKLQKLTLNGCTKLEVLPANIN-LESLEELDL 747

Query: 528 SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
           +  L  + FPEI  +++ L    L GTAI+ +P S                       T 
Sbjct: 748 TDCLVLKRFPEISTNIKVLK---LIGTAIKEVPSS-----------------------TK 781

Query: 588 SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
           S L+ L  L+LS    LK   E   +   ++ ++++   ++E+P  ++ +++L+   LS 
Sbjct: 782 SWLR-LCDLELSYNQNLK---ESQHAFDIITTMYINDKEMQEIPLWVKKISRLQTFILSG 837

Query: 648 CKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
           CK LV LP    +L  LK +N                 ESLE LD S
Sbjct: 838 CKKLVSLPQLSDSLSYLKVVN----------------CESLERLDCS 868



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 118/230 (51%), Gaps = 15/230 (6%)

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDC 648
           L  L+ + L+    LK+ P++  +  +L ELFL   +S+ E+PSSI   T L+ L L+ C
Sbjct: 645 LANLKWMYLNHSKILKELPDL-STATNLQELFLVKCSSLVELPSSIGKATNLQKLYLNMC 703

Query: 649 KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV----PH-STS 703
            +LV LPSSI  L  L+ L L+GC KLE +P  +  +ESLEELD++   V    P  ST+
Sbjct: 704 TSLVELPSSIGNLHKLQKLTLNGCTKLEVLPANIN-LESLEELDLTDCLVLKRFPEISTN 762

Query: 704 WYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKN 763
                 I    K V     S   LC L +L+    NL E     DI     +  +Y++  
Sbjct: 763 IKVLKLIGTAIKEVPSSTKSWLRLCDL-ELSYNQ-NLKESQHAFDI-----ITTMYINDK 815

Query: 764 SFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL 813
               +P  +  +S+L    L  CK+L SLPQL  ++  ++V  C SL  L
Sbjct: 816 EMQEIPLWVKKISRLQTFILSGCKKLVSLPQLSDSLSYLKVVNCESLERL 865


>gi|3860167|gb|AAC72979.1| disease resistance protein RPP1-WsC [Arabidopsis thaliana]
          Length = 1217

 Score =  315 bits (808), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 248/762 (32%), Positives = 378/762 (49%), Gaps = 103/762 (13%)

Query: 18   DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK------GGLVSLQRQ 71
            +VR+IGI G  G+GKTTIAR + + +S  F+ S  + N++    +         + LQ Q
Sbjct: 275  EVRIIGIWGPPGIGKTTIARFLLNQVSDRFQLSAIMVNIKGCYPRPCFDEYSAQLQLQNQ 334

Query: 72   LLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSR 131
            +LSQ++   D  I      + +   RL+ KKV LV+D+V  + QL +LA    WFG GSR
Sbjct: 335  MLSQMINHKDIMI----SHLGVAQERLRDKKVFLVLDEVDQLGQLDALAKETRWFGPGSR 390

Query: 132  IIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAG 191
            IIIT+ D  +LK HG++ VYK    + DEA Q+F M AF   QP +   +++  ++  AG
Sbjct: 391  IIITTEDLGVLKAHGINHVYKVGYPSNDEAFQIFCMNAFGQKQPHEGFDEIAREVMALAG 450

Query: 192  GLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIAC 251
             LPL L VLGS L G+S  EW  TL RL+      I  I+Q S+D L + +K +FL IAC
Sbjct: 451  ELPLGLTVLGSALRGKSKPEWERTLPRLKTSLDGNIGSIIQFSYDALCDEDKYLFLYIAC 510

Query: 252  FFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLI-----TVHNNTLWMHDLLQELGQQIV 306
             F       V   L G       G+ VL +K LI     T +   + MH LL++ G++  
Sbjct: 511  LFNDESTTKVKELL-GKFLDVKQGLHVLAQKSLISLSYLTFYGERIHMHTLLEQFGRETS 569

Query: 307  QRQSPEE-LGKRSRLWKEEEVCHVL-TESTGTELVEGIVLDNYHHENEVYLCASAKAFSK 364
            ++Q       KR  L     +C VL  ++T +    GI L+  + E E+ +  S K   +
Sbjct: 570  RKQFVHHGFTKRQLLVGARGICEVLDDDTTDSRRFIGINLELSNTEEELNI--SEKVLER 627

Query: 365  MTNLRLLKICNLQLPNGLE------------YLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
            + +   ++I     P  L+            Y S ++R L W  Y    LPS    +  I
Sbjct: 628  VHDFHFVRIDASFQPERLQPERLQLALQDLIYHSPKIRSLKWHRYQNICLPSTFNPEFLI 687

Query: 413  EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
            E+ M YS++ +LW+G K L  LK M LS+S +L  +P+ + A NLE+L L  C+ L E+ 
Sbjct: 688  ELDMRYSKLQKLWEGTKQLRNLKWMSLSYSIDLKELPNLSTATNLEELKLSNCSSLVELP 747

Query: 473  -----------------------PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNL 509
                                   PS     KL IL++  C+SL+ LP  I   +L++L+L
Sbjct: 748  SSIEKLTSLQILDLQSCSSLVELPSFGNATKLEILDLDYCSSLVKLPPSINANNLQELSL 807

Query: 510  KS------LPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTA-IRGLPLS 562
            ++      LP +I     L  L++ G     + P  +  +  L  L L   + +  LP S
Sbjct: 808  RNCSRLIELPLSIGTATNLKKLNMKGCSSLVKLPSSIGDITDLEVLDLSNCSNLVELPSS 867

Query: 563  IELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL 622
            I  L  L++L +  C  LE LP+ + NLK L +L L+ CS+LK+FPEI  ++K    L+L
Sbjct: 868  IGNLQKLIVLTMHGCSKLETLPINI-NLKALSTLYLTDCSRLKRFPEISTNIK---YLWL 923

Query: 623  DGTSIKEVPSSI------------------------ELLTKLELLNLSDCKNLVRLPSSI 658
             GT+IKEVP SI                        +++TKL+L      K++  +P  +
Sbjct: 924  TGTAIKEVPLSIMSWSRLAEFRISYFESLKEFPHAFDIITKLQL-----SKDIQEVPPWV 978

Query: 659  IALKSLKTLNLSGCFKLENVPETLGQIE--------SLEELD 692
              +  L+ L+L+ C  L ++P+    ++        SLE+LD
Sbjct: 979  KRMSRLRVLSLNNCNNLVSLPQLSDSLDYIHADNCKSLEKLD 1020



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 183/390 (46%), Gaps = 58/390 (14%)

Query: 519  LKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNC 577
            L+ L  + +S  +  +E P +     +L EL L   +++  LP SIE L+ L +L+L++C
Sbjct: 706  LRNLKWMSLSYSIDLKELPNL-STATNLEELKLSNCSSLVELPSSIEKLTSLQILDLQSC 764

Query: 578  RSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIEL 636
             SL  LP +  N   L  L L  CS L K P  + +  +L EL L   S + E+P SI  
Sbjct: 765  SSLVELP-SFGNATKLEILDLDYCSSLVKLPPSINA-NNLQELSLRNCSRLIELPLSIGT 822

Query: 637  LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
             T L+ LN+  C +LV+LPSSI  +  L+ L+LS C  L  +P ++G ++ L  L +   
Sbjct: 823  ATNLKKLNMKGCSSLVKLPSSIGDITDLEVLDLSNCSNLVELPSSIGNLQKLIVLTM--- 879

Query: 697  AVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLK 756
               H  S    +PIN+              L +L  L LTDC+ ++   P    N   +K
Sbjct: 880  ---HGCSKLETLPINI-------------NLKALSTLYLTDCSRLK-RFPEISTN---IK 919

Query: 757  ELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLP----------------QLPP--- 797
             L+L+  +   +P SI   S+L    +   + L+  P                ++PP   
Sbjct: 920  YLWLTGTAIKEVPLSIMSWSRLAEFRISYFESLKEFPHAFDIITKLQLSKDIQEVPPWVK 979

Query: 798  ---NIRQVRVNGCASLVTL------LDALKL--CKSDSTMIACLDSLKLLGNKSLAFSML 846
                +R + +N C +LV+L      LD +    CKS   +  C ++  +  N    F + 
Sbjct: 980  RMSRLRVLSLNNCNNLVSLPQLSDSLDYIHADNCKSLEKLDCCFNNPDIRLNFPNCFKLN 1039

Query: 847  REYLEAVSNTRQHLSVVVPGSEIPEWFMYQ 876
            +E  + + +T   +  ++PG+++P  F ++
Sbjct: 1040 QEARDLIMHTSPCIDAMLPGTQVPACFNHR 1069


>gi|5903073|gb|AAD55631.1|AC008017_4 Similar to disease resistance proteins [Arabidopsis thaliana]
          Length = 1112

 Score =  315 bits (807), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 276/828 (33%), Positives = 419/828 (50%), Gaps = 81/828 (9%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           M++   K+  L++ G  D V MIGI GMGG+GK+TIA+ +YD  S +F A  FL+NV   
Sbjct: 161 MEAHMMKMTLLLNIGCEDEVHMIGIWGMGGIGKSTIAKCLYDRFSRQFPAHCFLENV--- 217

Query: 60  SSKG-GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            SKG  +  LQ++LLS +L   D  +W++  G   +  RL  +KV +V+D+V  V+QL  
Sbjct: 218 -SKGYDIKHLQKELLSHILYDEDVELWSMEAGSQEIKERLGHQKVFVVLDNVDKVEQLHG 276

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           LA +  WFG GSRIIIT+RD+ LL + GV+ +Y+   L+  +ALQ+F   AF    P   
Sbjct: 277 LAKDPSWFGPGSRIIITTRDKGLLNSCGVNNIYEVKCLDDKDALQVFKKLAFGGRPPSDG 336

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSG-RSVDEWRSTLERLEIEPPSEILDILQISFDG 237
             QL  R  R A GLP AL    S LS   ++DEW   L  LE  P   + +IL+ S+DG
Sbjct: 337 FEQLFIRASRLAHGLPSALVAFASHLSAIVAIDEWEDELALLETFPQKNVQEILRASYDG 396

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHD 296
           L + +K +FL +ACFF G    Y+  FL+ C       I  L  KCL+ +  +  + MH 
Sbjct: 397 LDQYDKTVFLHVACFFNGGHLRYIRAFLKNCDAR----INHLAAKCLVNISIDGCISMHI 452

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LL + G++IV+++S     K+  LW   E+ +VL  +T                   +L 
Sbjct: 453 LLVQTGREIVRQESDWRPSKQRFLWDPTEIHYVLDSNT-------------------HLG 493

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            +              + NLQL +    LS  L+LL W  YPL  LP   +    IE+ +
Sbjct: 494 GN--------------VSNLQLISDDYVLSRNLKLLHWDAYPLTILPPIFRPHTIIELSL 539

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
            YS++  LW G K L  L+++ ++ S NL  +P+ + A NLE+LILE CT L +I  S+ 
Sbjct: 540 RYSKLNSLWDGTKLLPNLRILDVTGSRNLRELPELSTAVNLEELILESCTSLVQIPESI- 598

Query: 477 LHNKLII--LNMKDCTSL--ITLPGKILMKSLEKLNLK----SLPTTISGLKCLSTLDVS 528
             N+L +  LNM  C  L  + L   +   SL +  LK    +LP + + L  L+ L + 
Sbjct: 599 --NRLYLRKLNMMYCDGLEGVILVNDLQEASLSRWGLKRIILNLPHSGATLSSLTDLAIQ 656

Query: 529 GDLKFREFPEIVEHMEHLSELHLEGTAIRGLP-LSIELLSGLVLLNLKNCRSLEILPVTV 587
           G + F +   +    +HLS   ++ TA + +  L      GL  L++K   S  + PV  
Sbjct: 657 GKI-FIKLSGLSGTGDHLSFSSVQKTAHQSVTHLLNSGFFGLKSLDIKRF-SYRLDPVNF 714

Query: 588 S-----NLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL 642
           S     +  CL  LKL   + ++  PE +  ++ L  L L G     +P+S+  L  L+ 
Sbjct: 715 SCLSFADFPCLTELKLINLN-IEDIPEDICQLQLLETLDLGGNDFVYLPTSMGQLAMLKY 773

Query: 643 LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHST 702
           L+LS+C+ L  LP     L  ++ L LSGC KL ++   LG        ++    V    
Sbjct: 774 LSLSNCRRLKALPQ----LSQVERLVLSGCVKLGSLMGILGA----GRYNLLDFCVEKCK 825

Query: 703 SWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK 762
           S  S + I  + KS         G   L +L+L +C  +  +L  ++ +   L  L LS 
Sbjct: 826 SLGSLMGILSVEKSAP-------GRNELLELSLENCKSLV-SLSEELSHFTKLTYLDLSS 877

Query: 763 NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
             F  +PTSI  LS +  + L +C ++ SL  LP +++ +  +GC SL
Sbjct: 878 LEFRRIPTSIRELSFMRTLYLNNCNKIFSLTDLPESLKYLYAHGCESL 925


>gi|22330441|ref|NP_176760.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|6227009|gb|AAF06045.1|AC009513_1 Strong similarity to gb|AF098963 disease resistance protein
           RPP1-WsB from Arabidopsis thaliana and contains 2
           PF|00931 NB-ARC domains and 5 PF|00560 Leucine Rich
           Repeats [Arabidopsis thaliana]
 gi|332196311|gb|AEE34432.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1036

 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 239/706 (33%), Positives = 367/706 (51%), Gaps = 69/706 (9%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVS-------- 67
           S +VRMIGI G  G+GKTTIAR+++   S  FE S F++NV+E+     + S        
Sbjct: 225 SDEVRMIGIWGPSGIGKTTIARILFSQFSDSFELSVFMENVKELMYTRPVCSDEYSAKLH 284

Query: 68  LQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFG 127
           LQ+Q +SQ++   D  I      + ++  RL+ KKV +V+D++    QL ++A    WFG
Sbjct: 285 LQKQFMSQIINHKDIEI----PHLGVVEDRLKDKKVFIVLDNIDQSIQLDAIAKESRWFG 340

Query: 128 SGSRIIITSRDEHLLKTH-GVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARI 186
            GSRIIIT++D  LLK H G++ +Y  +  +  EA Q+F M AF    P     +L+  +
Sbjct: 341 HGSRIIITTQDRKLLKAHDGINHIYNVNFPSAYEACQIFCMYAFGQKFPKDGFEELAWEV 400

Query: 187 IRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIF 246
            +  GGLPL L V+GS   G S  EW + L RL     + I  IL+ S++ L E +K +F
Sbjct: 401 AKLLGGLPLGLRVMGSHFRGMSKHEWINALPRLRTRLDANIQSILKFSYNALCEEDKDLF 460

Query: 247 LDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIV 306
           L IAC F     + V   L     +   G+ VL EK LI++    + MH+LL++LG++IV
Sbjct: 461 LYIACLFNNKRIEKVEEHLAEKSLNVKQGLHVLTEKSLISIEGGRIKMHNLLEQLGKEIV 520

Query: 307 Q----RQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAF 362
           +     Q   E GKR  L    ++C +LT  TG++ V GI    Y  E    L  S +AF
Sbjct: 521 RHGLGHQPIREPGKRQFLVDTRDICELLTNDTGSKSVIGIHF--YSSELSSELNISERAF 578

Query: 363 SKMTNLRLLKIC--------NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
             M NL+ L+           L LP GL YLS +L++L W  +PL  +PSN   +  +E+
Sbjct: 579 EGMPNLKFLRFYYRYGDESDKLYLPQGLNYLSQKLKILEWDHFPLTCMPSNFCTEYLVEL 638

Query: 415 YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
            M +S++ +LW+G + L  L  M L+HS+ L  +PD + A NL++L L  C+ L E+  S
Sbjct: 639 NMRFSKLHKLWEGNRPLANLNWMYLNHSKILKELPDLSTATNLQELFLVKCSSLVELPSS 698

Query: 475 LLLHNKLIILNMKDCTSLITLPGKI-LMKSLEKLNLKS------LPTTISGLKCLSTLDV 527
           +     L  L +  CTSL+ LP  I  +  L+KL L        LP  I+ L+ L  LD+
Sbjct: 699 IGKATNLQKLYLNMCTSLVELPSSIGNLHKLQKLTLNGCSKLEVLPANIN-LESLDELDL 757

Query: 528 SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
           +  L  + FPEI  +++ L  L    T I+ +P SI+                       
Sbjct: 758 TDCLVLKRFPEISTNIKVLKLLR---TTIKEVPSSIK----------------------- 791

Query: 588 SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
            +   LR L+LS    LK F   + ++  ++ ++ +   ++E+P  ++ +++L+ L L+ 
Sbjct: 792 -SWPRLRDLELSYNQNLKGF---MHALDIITTMYFNDIEMQEIPLWVKKISRLQTLILNG 847

Query: 648 CKNLVRLPSSIIALKSLKTLNLSGCFKLE----NVPETLGQIESLE 689
           CK LV LP    +L  LK +N     +L+    N   +LG I  L+
Sbjct: 848 CKKLVSLPQLPDSLSYLKVVNCESLERLDCSFHNPKMSLGFINCLK 893



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 148/288 (51%), Gaps = 28/288 (9%)

Query: 604 LKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
           LK+ P++  +  +L ELFL   +S+ E+PSSI   T L+ L L+ C +LV LPSSI  L 
Sbjct: 669 LKELPDL-STATNLQELFLVKCSSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGNLH 727

Query: 663 SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV----PHSTSWYSYIPINLMRKSVA 718
            L+ L L+GC KLE +P  +  +ESL+ELD++   V    P  ++  +   + L+R ++ 
Sbjct: 728 KLQKLTLNGCSKLEVLPANIN-LESLDELDLTDCLVLKRFPEIST--NIKVLKLLRTTIK 784

Query: 719 LKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
               S+     LR L L+    ++G + +    L  +  +Y +      +P  +  +S+L
Sbjct: 785 EVPSSIKSWPRLRDLELSYNQNLKGFMHA----LDIITTMYFNDIEMQEIPLWVKKISRL 840

Query: 779 LNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGN 838
             + L  CK+L SLPQLP ++  ++V  C SL  L  +    K     I C   LKL  N
Sbjct: 841 QTLILNGCKKLVSLPQLPDSLSYLKVVNCESLERLDCSFHNPKMSLGFINC---LKL--N 895

Query: 839 KSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNE-GSSITVT 885
           K       +E +  ++        V+PG E+P +F ++ + GSS+ V 
Sbjct: 896 KE-----AKELIIQITTK----CTVLPGREVPVYFTHRTKNGSSLRVN 934


>gi|334183667|ref|NP_001185325.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196312|gb|AEE34433.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1051

 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 240/707 (33%), Positives = 364/707 (51%), Gaps = 81/707 (11%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVS-------- 67
           S +VRMIGI G  G+GKTTIAR+++   S  FE S F++NV+E+     + S        
Sbjct: 240 SDEVRMIGIWGPSGIGKTTIARILFSQFSDSFELSVFMENVKELMYTRPVCSDEYSAKLH 299

Query: 68  LQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFG 127
           LQ+Q +SQ++   D  I      + ++  RL+ KKV +V+D++    QL ++A    WFG
Sbjct: 300 LQKQFMSQIINHKDIEI----PHLGVVEDRLKDKKVFIVLDNIDQSIQLDAIAKESRWFG 355

Query: 128 SGSRIIITSRDEHLLKTH-GVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARI 186
            GSRIIIT++D  LLK H G++ +Y  +  +  EA Q+F M AF    P     +L+  +
Sbjct: 356 HGSRIIITTQDRKLLKAHDGINHIYNVNFPSAYEACQIFCMYAFGQKFPKDGFEELAWEV 415

Query: 187 IRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIF 246
            +  GGLPL L V+GS   G S  EW + L RL     + I  IL+ S++ L E +K +F
Sbjct: 416 AKLLGGLPLGLRVMGSHFRGMSKHEWINALPRLRTRLDANIQSILKFSYNALCEEDKDLF 475

Query: 247 LDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIV 306
           L IAC F     + V   L     +   G+ VL EK LI++    + MH+LL++LG++IV
Sbjct: 476 LYIACLFNNKRIEKVEEHLAEKSLNVKQGLHVLTEKSLISIEGGRIKMHNLLEQLGKEIV 535

Query: 307 Q----RQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAF 362
           +     Q   E GKR  L    ++C +LT  TG++ V GI    Y  E    L  S +AF
Sbjct: 536 RHGLGHQPIREPGKRQFLVDTRDICELLTNDTGSKSVIGIHF--YSSELSSELNISERAF 593

Query: 363 SKMTNLRLLKIC--------NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
             M NL+ L+           L LP GL YLS +L++L W  +PL  +PSN   +  +E+
Sbjct: 594 EGMPNLKFLRFYYRYGDESDKLYLPQGLNYLSQKLKILEWDHFPLTCMPSNFCTEYLVEL 653

Query: 415 YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
            M +S++ +LW+G + L  L  M L+HS+ L  +PD + A NL++L L  C+ L E+  S
Sbjct: 654 NMRFSKLHKLWEGNRPLANLNWMYLNHSKILKELPDLSTATNLQELFLVKCSSLVELPSS 713

Query: 475 LLLHNKLIILNMKDCTSLITLPGKI-LMKSLEKLNLKS------LPTTISGLKCLSTLDV 527
           +     L  L +  CTSL+ LP  I  +  L+KL L        LP  I+ L+ L  LD+
Sbjct: 714 IGKATNLQKLYLNMCTSLVELPSSIGNLHKLQKLTLNGCSKLEVLPANIN-LESLDELDL 772

Query: 528 SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
           +  L  + FPEI  +++ L  L    T I+ +P SI+                       
Sbjct: 773 TDCLVLKRFPEISTNIKVLKLLR---TTIKEVPSSIK----------------------- 806

Query: 588 SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
            +   LR L+LS    LK F   + ++  ++ ++ +   ++E+P  ++ +++L+ L L+ 
Sbjct: 807 -SWPRLRDLELSYNQNLKGF---MHALDIITTMYFNDIEMQEIPLWVKKISRLQTLILNG 862

Query: 648 CKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
           CK LV LP    +L  LK +N                 ESLE LD S
Sbjct: 863 CKKLVSLPQLPDSLSYLKVVN----------------CESLERLDCS 893



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 145/288 (50%), Gaps = 28/288 (9%)

Query: 604 LKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
           LK+ P++  +  +L ELFL   +S+ E+PSSI   T L+ L L+ C +LV LPSSI  L 
Sbjct: 684 LKELPDL-STATNLQELFLVKCSSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGNLH 742

Query: 663 SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV----PHSTSWYSYIPINLMRKSVA 718
            L+ L L+GC KLE +P  +  +ESL+ELD++   V    P  ++  +   + L+R ++ 
Sbjct: 743 KLQKLTLNGCSKLEVLPANIN-LESLDELDLTDCLVLKRFPEIST--NIKVLKLLRTTIK 799

Query: 719 LKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
               S+     LR L L+    ++G + +    L  +  +Y +      +P  +  +S+L
Sbjct: 800 EVPSSIKSWPRLRDLELSYNQNLKGFMHA----LDIITTMYFNDIEMQEIPLWVKKISRL 855

Query: 779 LNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGN 838
             + L  CK+L SLPQLP ++  ++V  C SL  L  +    K     I CL        
Sbjct: 856 QTLILNGCKKLVSLPQLPDSLSYLKVVNCESLERLDCSFHNPKMSLGFINCL-------- 907

Query: 839 KSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNE-GSSITVT 885
                 + +E  E +       + V+PG E+P +F ++ + GSS+ V 
Sbjct: 908 -----KLNKEAKELIIQITTKCT-VLPGREVPVYFTHRTKNGSSLRVN 949


>gi|297805564|ref|XP_002870666.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316502|gb|EFH46925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1104

 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 226/681 (33%), Positives = 353/681 (51%), Gaps = 64/681 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +++   KL  L+    +DV+MIGI G  G+GKTTIAR +++ +S  F  S F+ N+ +++
Sbjct: 190 LEAHLTKLDSLLCLECNDVKMIGIWGPAGIGKTTIARALFNQLSTGFRHSCFMGNI-DVN 248

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           +    + L   LLS++L   D  I +    +  +   L  ++VL+V+DDV D++QL+ LA
Sbjct: 249 NYDSKLRLHNMLLSKILNQKDMKIHH----LGAIKEWLHNQRVLIVLDDVDDLEQLEVLA 304

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
               WFG  SRII+T +D+ +LK HG++++Y     +  EAL++F + AFK   P     
Sbjct: 305 KESFWFGPRSRIIVTLKDKKILKAHGINDIYHVDYPSKKEALEIFCLSAFKQSSPQDGFE 364

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           + + +++   G LPLAL V+GS   G S DEWR  L  +EI    ++ D+L++ +D L E
Sbjct: 365 EFARKVVELCGNLPLALCVVGSSFYGESEDEWRLQLYGIEINLDRKVEDVLRVGYDKLLE 424

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWMHDLLQ 299
             + +FL IACFF     DYV+  L         G++ L  K L+ +  +  + MH LLQ
Sbjct: 425 KHQSLFLHIACFFNHESVDYVSTMLADSTLDVENGLKNLAAKSLVHISTHGRIRMHCLLQ 484

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           +LG+ +V +QS E+ GKR  L + +E+  VL   TGT  V GI  D            S 
Sbjct: 485 QLGRHVVVQQSGEQ-GKRQFLVEAKEIRDVLANKTGTGSVIGISFD---MSKIGEFSISK 540

Query: 360 KAFSKMTNLRLLKIC--NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
           +AF +M NL+ LK    N+ L   ++YL  RLRLL W  YP K LP   Q +  +E++M 
Sbjct: 541 RAFERMCNLKFLKFYNGNVSLLEDMKYLP-RLRLLHWDSYPRKSLPLTFQPECLVELHMR 599

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
           YS++  LW GI+ L  LK + L +S NL  +P+ + A NLE L L GC  L  +  S+  
Sbjct: 600 YSKLEMLWGGIQPLANLKKIDLGYSFNLKEIPNLSKATNLETLKLIGCESLVVLPSSIRN 659

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
            +KL +L+   C+ L  +P  I + SLE++ + +                    + R FP
Sbjct: 660 LHKLEMLDASGCSKLQVIPTNIDLASLEEVKMDNCS------------------RLRSFP 701

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
           +I  ++E+LS   + GT I+  P SI          +     L+IL +            
Sbjct: 702 DISRNIEYLS---VAGTKIKEFPASI----------VGYWSRLDILQI------------ 736

Query: 598 LSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSS 657
             G   LK+   + +S+K L    L  + IK +P  +  L  L  LN+ +C+ LV +   
Sbjct: 737 --GSRSLKRLTHVPQSVKSLD---LSNSDIKMIPDYVIGLPHLGYLNVDNCRKLVSIQGH 791

Query: 658 IIALKSLKTLNLSGCFKLENV 678
                SL +L+   C  L++V
Sbjct: 792 ---FPSLASLSAEHCISLKSV 809



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 163/370 (44%), Gaps = 63/370 (17%)

Query: 530 DLKFREF----PEIVEHMEHLSEL---HLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEI 582
           +LKF +F      ++E M++L  L   H +    + LPL+ +    LV L+++  + LE+
Sbjct: 548 NLKFLKFYNGNVSLLEDMKYLPRLRLLHWDSYPRKSLPLTFQP-ECLVELHMRYSK-LEM 605

Query: 583 LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL 642
           L   +  L  L+ + L     LK+ P + ++                        T LE 
Sbjct: 606 LWGGIQPLANLKKIDLGYSFNLKEIPNLSKA------------------------TNLET 641

Query: 643 LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHST 702
           L L  C++LV LPSSI  L  L+ L+ SGC KL+ +P  +  + SLEE+ +   +   S 
Sbjct: 642 LKLIGCESLVVLPSSIRNLHKLEMLDASGCSKLQVIPTNI-DLASLEEVKMDNCSRLRS- 699

Query: 703 SWYSYIPINLMRKSVA----LKLP-SLSGLCS-LRKLNLTDCNLME-GALPSDIGNLCSL 755
             +  I  N+   SVA     + P S+ G  S L  L +   +L     +P       S+
Sbjct: 700 --FPDISRNIEYLSVAGTKIKEFPASIVGYWSRLDILQIGSRSLKRLTHVPQ------SV 751

Query: 756 KELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLD 815
           K L LS +    +P  +  L  L  + +++C++L S+    P++  +    C SL ++  
Sbjct: 752 KSLDLSNSDIKMIPDYVIGLPHLGYLNVDNCRKLVSIQGHFPSLASLSAEHCISLKSVCC 811

Query: 816 ALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMY 875
           +     S+     CL     L N S            +     + S+ +PG EIP  F +
Sbjct: 812 SFHRPISNLMFHNCLK----LDNAS---------KRGIVQLSGYKSICLPGKEIPAEFTH 858

Query: 876 QNEGSSITVT 885
           Q  G+SIT++
Sbjct: 859 QTRGNSITIS 868


>gi|215261579|gb|ACJ64859.1| disease resistance protein RPP1-like protein R5 [Arabidopsis
           thaliana]
          Length = 1202

 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 222/676 (32%), Positives = 350/676 (51%), Gaps = 49/676 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M +  +++  L+     +VRMIGI G  G+GKTTIAR +++ +S  F+ S  + N+R I 
Sbjct: 328 MRAHMDRMEHLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIIVNIRGIY 387

Query: 61  SK------GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
            +         + +Q+++LS +    D  + N    + +   RL+ KKV LV+D+V  ++
Sbjct: 388 PRLRLDEYSAQMEVQQKMLSTIFSQKDIIVPN----LGVAQERLKDKKVFLVLDEVDHIR 443

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL +LA    WFG GSRIIIT+ D  +L  H ++ VYK    + DEA Q+F M AF   Q
Sbjct: 444 QLDALAKETRWFGPGSRIIITTEDVRVLNAHRINHVYKVKFPSSDEAFQIFCMNAFGQKQ 503

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           P +   +L+  ++  AG LPL L+VLGS L G S  EW  TL +++     EI  I++ S
Sbjct: 504 PHEGFCKLAWEVMALAGNLPLGLKVLGSALRGMSKPEWERTLPKIKYCLDGEIKSIIKFS 563

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLW- 293
           FD L + +K +FL IACFF G     V   L          + VL+EK LI+++ + L  
Sbjct: 564 FDALCDEDKDLFLYIACFFNGIKLHKVEGVLAKKFLDVRQSLHVLVEKSLISINQSGLIE 623

Query: 294 MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
            H +L++ G++  ++Q      K   L    ++C VL + T         +  Y    E 
Sbjct: 624 THTVLKQFGRETSRKQFVHGFAKPQFLVDARDICEVLNDDT---------IAFYRDYTEE 674

Query: 354 YLCASAKAFSKMTNLRLLKICNLQLPNGLEYL---SNRLRLLGWRGYPLKFLPSNLQMDK 410
            L  S KA  +M + + ++I     P  L  L   S ++RLL W       LP     + 
Sbjct: 675 ELSISEKALERMHDFQFVRINAFAHPERLHSLLHHSQKIRLLHWSYLKDICLPCTFNPEF 734

Query: 411 TIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYE 470
            +E+ M  S++ +LW+G K L  L+ M L +S +L ++PD + A NLE LIL  C+ L  
Sbjct: 735 LVELGMYASKLHKLWEGTKQLQNLRWMDLCYSRDLTKLPDLSTATNLEDLILRNCSSLVR 794

Query: 471 IHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG- 529
           I  S+     L IL++ DC++L+ LP       LE+LNL +  + +   K  S+++ +  
Sbjct: 795 IPCSIENATNLQILDLSDCSNLVELPSIGNATRLEELNLNNCSSLV---KLPSSINATNL 851

Query: 530 -DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS 588
             L  R    +VE                 LP +IE  + L +L+L NC SL  LP +++
Sbjct: 852 QKLFLRNCSRVVE-----------------LP-AIENATNLQVLDLHNCSSLLELPPSIA 893

Query: 589 NLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDC 648
           +   L+ L +SGCS+LK FPEI  +++ ++   L  T+IKEVP SI   ++L    +S  
Sbjct: 894 SATNLKKLDISGCSQLKCFPEISTNIEIVN---LIETAIKEVPLSIMSWSRLSYFGMSYF 950

Query: 649 KNLVRLPSSIIALKSL 664
           ++L   P ++  +  L
Sbjct: 951 ESLNEFPHALDIITDL 966



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 153/327 (46%), Gaps = 43/327 (13%)

Query: 559  LPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLS 618
            +P SIE  + L +L+L +C +L  LP ++ N   L  L L+ CS L K P  + +  +L 
Sbjct: 795  IPCSIENATNLQILDLSDCSNLVELP-SIGNATRLEELNLNNCSSLVKLPSSINAT-NLQ 852

Query: 619  ELFLDGTS-IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLEN 677
            +LFL   S + E+P+ IE  T L++L+L +C +L+ LP SI +  +LK L++SGC +L+ 
Sbjct: 853  KLFLRNCSRVVELPA-IENATNLQVLDLHNCSSLLELPPSIASATNLKKLDISGCSQLKC 911

Query: 678  VPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTD 737
             PE    IE +  ++ +   VP S   +S +              S  G+     LN   
Sbjct: 912  FPEISTNIEIVNLIETAIKEVPLSIMSWSRL--------------SYFGMSYFESLN--- 954

Query: 738  CNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPP 797
                E     DI     + +L L +     +P  +  +S+L  + L DCK L SLPQL  
Sbjct: 955  ----EFPHALDI-----ITDLVLIREDIQEIPPWVKGMSRLGVLRLYDCKNLVSLPQLSD 1005

Query: 798  NIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTR 857
            N+  +  + C SL               +  C ++ ++       F++ +E  + + +T 
Sbjct: 1006 NLEYIVADNCQSL-------------ERLDCCFNNREIHLIFPNCFNLNQEARDLIMHTS 1052

Query: 858  QHLSVVVPGSEIPEWFMYQNEGSSITV 884
                 +  G+++P  F ++    S+ +
Sbjct: 1053 TDGYAIFSGTQVPACFNHRATSDSLKI 1079


>gi|255579431|ref|XP_002530559.1| conserved hypothetical protein [Ricinus communis]
 gi|223529897|gb|EEF31827.1| conserved hypothetical protein [Ricinus communis]
          Length = 833

 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 201/462 (43%), Positives = 285/462 (61%), Gaps = 25/462 (5%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DSR + +R L+   S+DV++IGI GMGG+GKTTI   ++  I  +F    F+ +VRE  
Sbjct: 139 IDSRSKDVRSLLCLESTDVQVIGIWGMGGIGKTTIVYKLFSQIHKQFPRQCFVADVREKF 198

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDM-----LGSRLQRKKVLLVIDDVVDVKQ 115
                 SLQ ++L  LL        N+  G+ M     +  RL ++KVL+V+DDV D+ Q
Sbjct: 199 ENSTKCSLQSEILYGLLGKD-----NLNTGMPMKLNSSVRRRLSQEKVLIVLDDVSDLDQ 253

Query: 116 LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP 175
           ++ + G+   +GSGSRIIITSRD  LLK  G  +VY+   LN+ EAL LFN+ AFK   P
Sbjct: 254 IEYVVGSHVIYGSGSRIIITSRDRQLLKNVGA-KVYEVKKLNHFEALHLFNLHAFKQNPP 312

Query: 176 LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
            +E ++L    I YA G+PLAL+VLGS L G+SV+EW   LE+L++   +++  IL+IS+
Sbjct: 313 KKEYMELLRMAINYAQGIPLALKVLGSNLYGKSVEEWEDELEKLKVSSDTKVKKILRISY 372

Query: 236 DGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWM 294
           DGL E +K+IFLDIACFFKG D+D VTN L GCGF    GI  LI+K L+T+  +N L M
Sbjct: 373 DGLDEKQKEIFLDIACFFKGYDKDIVTNVLNGCGFFAKSGISHLIDKSLVTISRDNKLGM 432

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           HDLLQ +G+ IV  +  +ELG+R+RLW  E+V  VL +  GT+ VEG++L+        Y
Sbjct: 433 HDLLQTMGKDIVSEE--KELGRRTRLWNSEDVYKVLAKDMGTKSVEGMLLNMSQIR---Y 487

Query: 355 LCASAKAFSKMTNLRLLKIC--------NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNL 406
           +  S+ AF K+ NLR+LK           + LP GLEY    LR L W  YPLK LP   
Sbjct: 488 IHLSSTAFEKLCNLRVLKFYEKNYFKKNKVLLPEGLEYFPEELRFLHWDQYPLKCLPLQF 547

Query: 407 QMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRM 448
           +++  +E++M  S+I + W   +    +  + ++ SE L RM
Sbjct: 548 RLENLVELHMPKSQIRQFWTEDQDNYGVIALYITGSEVLQRM 589


>gi|186479099|ref|NP_001117396.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332193249|gb|AEE31370.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1161

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 251/764 (32%), Positives = 381/764 (49%), Gaps = 84/764 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV---- 56
           ++    ++  L+   S +VRM+GI G  G+GKTTIAR ++  +S  F+ S F+D      
Sbjct: 186 IEDHIAEMSLLLQLESKEVRMVGISGSSGIGKTTIARALFKRLSRHFQGSTFIDRAFVSY 245

Query: 57  -REISSKGG------LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDD 109
            R I S          + LQ   LS++L   D  I    D    L  RL+ +KVL++IDD
Sbjct: 246 SRNIYSGANPDDPNMKLQLQGHFLSEILGKKDIKI----DDPAALEERLKHQKVLIIIDD 301

Query: 110 VVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKA 169
           + D+  L +L G  +WFG GSRII+ + D+H L  HG+D +Y+        A Q+    A
Sbjct: 302 LDDIMVLDTLVGQTQWFGYGSRIIVVTNDKHFLIAHGIDHIYEVSFPTDVHACQMLCQSA 361

Query: 170 FKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLE--IEPPSEI 227
           FK     +    L   ++R+AG  PL L +LG +L  R ++ W   L RLE  +    +I
Sbjct: 362 FKQNYAPKGFEDLVVDVVRHAGNFPLGLNLLGKYLRRRDMEYWMDMLPRLENSLRIDGKI 421

Query: 228 LDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV 287
             IL+IS+DGL+  +++IF  IAC F   +   + + L          +  L +K LI V
Sbjct: 422 EKILRISYDGLESEDQEIFRHIACLFNHMEVTTIKSLLADSDVS--FALENLADKSLIHV 479

Query: 288 HNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNY 347
               + MH  LQE+G++IV+ QS ++ G+R  L    ++  +L   TGT+ V GI LD  
Sbjct: 480 RQGYVVMHRSLQEMGRKIVRIQSIDKPGEREFLVDPNDIHDILNACTGTQKVLGISLD-- 537

Query: 348 HHENEVYLCASAKAFSKMTNLRLLKICN-------LQLPNGLEYLSNRLRLLGWRGYPLK 400
              N   L    +AF  M+NLR L+I N       L LP   +YL   L+LL W  +P++
Sbjct: 538 -IRNIRELDVHERAFKGMSNLRFLEIKNFGLKEDGLHLPPSFDYLPRTLKLLCWSKFPMR 596

Query: 401 FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
            +P   + +  +++ M YS++ +LW+G+  L  LK M L  S NL  +PD + A NLE L
Sbjct: 597 CMPFGFRPENLVKLEMQYSKLHKLWEGVAPLTCLKEMDLHGSSNLKVIPDLSEATNLEIL 656

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPT 514
            L+ C  L E+  S+   NKL+ L+M +C SL  LP    +KSL++LN      LK+ P 
Sbjct: 657 NLKFCESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGFNLKSLDRLNLYHCSKLKTFPK 716

Query: 515 TISGLKCL-----------STLDVSGDLKFREFPEIVEHME-----------------HL 546
             + +  L           S L +   ++FR   E  +  +                  L
Sbjct: 717 FSTNISVLNLNLTNIEDFPSNLHLENLVEFRISKEESDEKQWEEEKPLTPFLAMMLSPTL 776

Query: 547 SELHLEGTAIRGLPLSIELLSGLVLLN------LKNCRSLEILPVTVSNLKCLRSLKLSG 600
           + LHLE      LP  +EL S    LN      + NC +LE LP  + NL+ L  L  SG
Sbjct: 777 TSLHLE-----NLPSLVELTSSFQNLNQLKDLIIINCINLETLPTGI-NLQSLDYLCFSG 830

Query: 601 CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           CS+L+ FPEI     ++S L+LD T+I+EVP  IE  + L  L+++ C  L  +   +  
Sbjct: 831 CSQLRSFPEI---STNISVLYLDETAIEEVPWWIEKFSNLTELSMNSCSRLKCVFLHMSK 887

Query: 661 LKSLKTLNLSGCFKLENV-----PETLGQIESLEELDISGTAVP 699
           LK LK      C  L  V     P  + ++   + +D + +++P
Sbjct: 888 LKHLKEALFRNCGTLTRVELSGYPSGM-EVMKADNIDTASSSLP 930



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 117/511 (22%), Positives = 204/511 (39%), Gaps = 115/511 (22%)

Query: 489  CTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSE 548
            C      P  ++   ++   L  L   ++ L CL  +D+ G    +  P++ E   +L  
Sbjct: 597  CMPFGFRPENLVKLEMQYSKLHKLWEGVAPLTCLKEMDLHGSSNLKVIPDLSE-ATNLEI 655

Query: 549  LHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKF 607
            L+L+   ++  LP SI  L+ L+ L++ NC+SL+ILP T  NLK L  L L  CSKLK F
Sbjct: 656  LNLKFCESLVELPSSIRNLNKLLNLDMLNCKSLKILP-TGFNLKSLDRLNLYHCSKLKTF 714

Query: 608  PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL------------------------- 642
            P+      ++S L L+ T+I++ PS++ L   +E                          
Sbjct: 715  PKFS---TNISVLNLNLTNIEDFPSNLHLENLVEFRISKEESDEKQWEEEKPLTPFLAMM 771

Query: 643  -------LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
                   L+L +  +LV L SS   L  LK L +  C  LE +P  +  ++SL+ L  SG
Sbjct: 772  LSPTLTSLHLENLPSLVELTSSFQNLNQLKDLIIINCINLETLPTGIN-LQSLDYLCFSG 830

Query: 696  TAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSL 755
             +   S                    P +S   S+                         
Sbjct: 831  CSQLRS-------------------FPEISTNISV------------------------- 846

Query: 756  KELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQ----SLPQLPPNIRQVRVNGCASLV 811
              LYL + +   +P  I   S L  + +  C RL+     + +L  ++++     C +L 
Sbjct: 847  --LYLDETAIEEVPWWIEKFSNLTELSMNSCSRLKCVFLHMSKL-KHLKEALFRNCGTLT 903

Query: 812  TL-----LDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLRE-YLEAVSNTRQHLSVVVP 865
             +        +++ K+D+   A     K++ +    F++  E  L    +   +  +   
Sbjct: 904  RVELSGYPSGMEVMKADNIDTASSSLPKVVLSFLDCFNLDPETVLHHQESIIFNYMLFTG 963

Query: 866  GSEIPEWFMYQNEGSS--------ITVTRP-------SNLYNKKKLVGYAICCVFHVLKN 910
              E+P +F Y+  GSS        + +++P       + + NK++ V   + C F   K+
Sbjct: 964  KEEVPSYFTYRTTGSSSLTIPILHVHLSQPFFRFRIGALVTNKEEPVELEVKCEF---KD 1020

Query: 911  SRGNNC-FGSYPTHQLNCHIGHGIYGIGFRD 940
              GNN  +  Y     + + G   Y I   D
Sbjct: 1021 RFGNNFDYDIYFEVNKDRYYGEDCYNIAILD 1051


>gi|227438141|gb|ACP30560.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 823

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 224/672 (33%), Positives = 358/672 (53%), Gaps = 75/672 (11%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE------ISSKGGLVSLQ 69
           S +VR++GI G  G+GKTTIAR +Y+     F+ S F++NV E      + S G  + LQ
Sbjct: 9   SQEVRLVGIWGPAGIGKTTIARALYNQFHENFKLSIFMENVSESYGGTNLDSYGLKLGLQ 68

Query: 70  RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG 129
           ++ LS+LL      I +    +  +  RL+ +KVL V+DDV +++QLQ+LA   +WFG+ 
Sbjct: 69  QRFLSKLLDQHGLRIHH----LGAIKERLKNQKVLAVLDDVDNIEQLQALAKETQWFGNK 124

Query: 130 SRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRY 189
           SRII+T+R++ LL +H +  VYK    + +EAL +F   AF+   P  +   ++      
Sbjct: 125 SRIIVTTRNKQLLISHNISHVYKVPFPSREEALAIFCQHAFRECYPSDDFKDIAIEFATL 184

Query: 190 AGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDI 249
           AG LPL L VLGSF+ G+S +EW  +L  L+     EI  +L++ ++GL + +K +FL I
Sbjct: 185 AGHLPLGLRVLGSFMRGKSKEEWEVSLPTLKTRLTGEIEKLLKVGYEGLHKDDKALFLHI 244

Query: 250 ACFFKGNDRDYVTNF-LEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQ 307
           AC F G+   YV    +         G++VL ++ LI ++ +  + MH LL++LG+++V+
Sbjct: 245 ACLFNGHHETYVKQMVVANSDLDVSFGLKVLADRSLIQIYVDGKVVMHSLLRQLGREVVR 304

Query: 308 RQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTN 367
            QS +E GKR  L    E+C VL+ +TGT+ V G+ +D      + Y+  + KAF  M N
Sbjct: 305 EQSVDEPGKRQFLMSAREICGVLSNNTGTDSVLGMSVDMCDLNEDFYI--NEKAFENMRN 362

Query: 368 LRLLKIC--------NLQLP-NGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
           L  ++I          ++LP +GL YL  +LRLL W  YP  FLPS  + +  +E+ M +
Sbjct: 363 LLYIRIYRSNDANPNKMKLPDDGLSYLP-QLRLLQWDAYPHMFLPSRFRTECLVELSMSH 421

Query: 419 SRIGELW-KGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
           S++  LW    + L  LK M LS+S NL   P+   A  LE+L L  C  L E+  S+  
Sbjct: 422 SKLKTLWGDNAQPLRNLKNMNLSNSPNLESFPNLLEATKLERLDLSWCESLVELPSSIQN 481

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
            +KL +L M  CTSL  LP  I + SL +L+ ++                   L+ + FP
Sbjct: 482 LHKLSLLEMSCCTSLEILPTNINLASLSRLHFRNC------------------LRLKTFP 523

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
           EI  ++ +L    ++GTAI  +P S+           K+ R +E + +  + ++ L +L 
Sbjct: 524 EISTNLNYLK---IKGTAITEVPPSV-----------KSWRRIEEICMESTEVRILMNL- 568

Query: 598 LSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPS 656
                     P I      L  L L G T +  + + +  L +L ++++S C +LV LP 
Sbjct: 569 ----------PYI------LDTLCLRGNTKLVAIANYLIRLRRLRMIDISFCVSLVYLPK 612

Query: 657 SIIALKSLKTLN 668
              +++ L   N
Sbjct: 613 LPYSVRYLTAFN 624



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 143/302 (47%), Gaps = 39/302 (12%)

Query: 591 KCLRSLKLSGCSKLKKF----PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLS 646
           +CL  L +S  SKLK       + +R++K+++    +  +++  P+ +E  TKLE L+LS
Sbjct: 412 ECLVELSMSH-SKLKTLWGDNAQPLRNLKNMN--LSNSPNLESFPNLLEA-TKLERLDLS 467

Query: 647 DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG----TAVPHST 702
            C++LV LPSSI  L  L  L +S C  LE +P  +  + SL  L           P  +
Sbjct: 468 WCESLVELPSSIQNLHKLSLLEMSCCTSLEILPTNIN-LASLSRLHFRNCLRLKTFPEIS 526

Query: 703 SWYSYIPINLMRKSVALKLPSLSGLCSLRKLNL--TDCNLMEGALPSDIGNLCSLKELYL 760
           +  +Y+ I     ++    PS+     + ++ +  T+  ++   LP  +  LC      L
Sbjct: 527 TNLNYLKIK--GTAITEVPPSVKSWRRIEEICMESTEVRILMN-LPYILDTLC------L 577

Query: 761 SKNS-FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKL 819
             N+  V++   +  L +L  I++  C  L  LP+LP ++R +    C SL  L      
Sbjct: 578 RGNTKLVAIANYLIRLRRLRMIDISFCVSLVYLPKLPYSVRYLTAFNCESLQRLHGPF-- 635

Query: 820 CKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEG 879
            ++ S  +   + LKL  N   A  M+ + +  V        V++PG ++P +F ++  G
Sbjct: 636 -RNPSIRLKFTNCLKLDHN---AQEMIHQSVFDV--------VILPGGQVPAYFTHRYNG 683

Query: 880 SS 881
           +S
Sbjct: 684 NS 685


>gi|12597847|gb|AAG60157.1|AC074360_22 downy mildew resistance protein RPP5, putative [Arabidopsis
           thaliana]
          Length = 1202

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 251/764 (32%), Positives = 381/764 (49%), Gaps = 84/764 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV---- 56
           ++    ++  L+   S +VRM+GI G  G+GKTTIAR ++  +S  F+ S F+D      
Sbjct: 186 IEDHIAEMSLLLQLESKEVRMVGISGSSGIGKTTIARALFKRLSRHFQGSTFIDRAFVSY 245

Query: 57  -REISSKGG------LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDD 109
            R I S          + LQ   LS++L   D  I    D    L  RL+ +KVL++IDD
Sbjct: 246 SRNIYSGANPDDPNMKLQLQGHFLSEILGKKDIKI----DDPAALEERLKHQKVLIIIDD 301

Query: 110 VVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKA 169
           + D+  L +L G  +WFG GSRII+ + D+H L  HG+D +Y+        A Q+    A
Sbjct: 302 LDDIMVLDTLVGQTQWFGYGSRIIVVTNDKHFLIAHGIDHIYEVSFPTDVHACQMLCQSA 361

Query: 170 FKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLE--IEPPSEI 227
           FK     +    L   ++R+AG  PL L +LG +L  R ++ W   L RLE  +    +I
Sbjct: 362 FKQNYAPKGFEDLVVDVVRHAGNFPLGLNLLGKYLRRRDMEYWMDMLPRLENSLRIDGKI 421

Query: 228 LDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV 287
             IL+IS+DGL+  +++IF  IAC F   +   + + L          +  L +K LI V
Sbjct: 422 EKILRISYDGLESEDQEIFRHIACLFNHMEVTTIKSLLADSDVS--FALENLADKSLIHV 479

Query: 288 HNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNY 347
               + MH  LQE+G++IV+ QS ++ G+R  L    ++  +L   TGT+ V GI LD  
Sbjct: 480 RQGYVVMHRSLQEMGRKIVRIQSIDKPGEREFLVDPNDIHDILNACTGTQKVLGISLD-- 537

Query: 348 HHENEVYLCASAKAFSKMTNLRLLKICN-------LQLPNGLEYLSNRLRLLGWRGYPLK 400
              N   L    +AF  M+NLR L+I N       L LP   +YL   L+LL W  +P++
Sbjct: 538 -IRNIRELDVHERAFKGMSNLRFLEIKNFGLKEDGLHLPPSFDYLPRTLKLLCWSKFPMR 596

Query: 401 FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
            +P   + +  +++ M YS++ +LW+G+  L  LK M L  S NL  +PD + A NLE L
Sbjct: 597 CMPFGFRPENLVKLEMQYSKLHKLWEGVAPLTCLKEMDLHGSSNLKVIPDLSEATNLEIL 656

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPT 514
            L+ C  L E+  S+   NKL+ L+M +C SL  LP    +KSL++LN      LK+ P 
Sbjct: 657 NLKFCESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGFNLKSLDRLNLYHCSKLKTFPK 716

Query: 515 TISGLKCL-----------STLDVSGDLKFREFPEIVEHME-----------------HL 546
             + +  L           S L +   ++FR   E  +  +                  L
Sbjct: 717 FSTNISVLNLNLTNIEDFPSNLHLENLVEFRISKEESDEKQWEEEKPLTPFLAMMLSPTL 776

Query: 547 SELHLEGTAIRGLPLSIELLSGLVLLN------LKNCRSLEILPVTVSNLKCLRSLKLSG 600
           + LHLE      LP  +EL S    LN      + NC +LE LP  + NL+ L  L  SG
Sbjct: 777 TSLHLE-----NLPSLVELTSSFQNLNQLKDLIIINCINLETLPTGI-NLQSLDYLCFSG 830

Query: 601 CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           CS+L+ FPEI     ++S L+LD T+I+EVP  IE  + L  L+++ C  L  +   +  
Sbjct: 831 CSQLRSFPEI---STNISVLYLDETAIEEVPWWIEKFSNLTELSMNSCSRLKCVFLHMSK 887

Query: 661 LKSLKTLNLSGCFKLENV-----PETLGQIESLEELDISGTAVP 699
           LK LK      C  L  V     P  + ++   + +D + +++P
Sbjct: 888 LKHLKEALFRNCGTLTRVELSGYPSGM-EVMKADNIDTASSSLP 930



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 117/511 (22%), Positives = 204/511 (39%), Gaps = 115/511 (22%)

Query: 489  CTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSE 548
            C      P  ++   ++   L  L   ++ L CL  +D+ G    +  P++ E   +L  
Sbjct: 597  CMPFGFRPENLVKLEMQYSKLHKLWEGVAPLTCLKEMDLHGSSNLKVIPDLSE-ATNLEI 655

Query: 549  LHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKF 607
            L+L+   ++  LP SI  L+ L+ L++ NC+SL+ILP T  NLK L  L L  CSKLK F
Sbjct: 656  LNLKFCESLVELPSSIRNLNKLLNLDMLNCKSLKILP-TGFNLKSLDRLNLYHCSKLKTF 714

Query: 608  PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL------------------------- 642
            P+      ++S L L+ T+I++ PS++ L   +E                          
Sbjct: 715  PKFS---TNISVLNLNLTNIEDFPSNLHLENLVEFRISKEESDEKQWEEEKPLTPFLAMM 771

Query: 643  -------LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
                   L+L +  +LV L SS   L  LK L +  C  LE +P  +  ++SL+ L  SG
Sbjct: 772  LSPTLTSLHLENLPSLVELTSSFQNLNQLKDLIIINCINLETLPTGIN-LQSLDYLCFSG 830

Query: 696  TAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSL 755
             +   S                    P +S   S+                         
Sbjct: 831  CSQLRS-------------------FPEISTNISV------------------------- 846

Query: 756  KELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQ----SLPQLPPNIRQVRVNGCASLV 811
              LYL + +   +P  I   S L  + +  C RL+     + +L  ++++     C +L 
Sbjct: 847  --LYLDETAIEEVPWWIEKFSNLTELSMNSCSRLKCVFLHMSKL-KHLKEALFRNCGTLT 903

Query: 812  TL-----LDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLRE-YLEAVSNTRQHLSVVVP 865
             +        +++ K+D+   A     K++ +    F++  E  L    +   +  +   
Sbjct: 904  RVELSGYPSGMEVMKADNIDTASSSLPKVVLSFLDCFNLDPETVLHHQESIIFNYMLFTG 963

Query: 866  GSEIPEWFMYQNEGSS--------ITVTRP-------SNLYNKKKLVGYAICCVFHVLKN 910
              E+P +F Y+  GSS        + +++P       + + NK++ V   + C F   K+
Sbjct: 964  KEEVPSYFTYRTTGSSSLTIPILHVHLSQPFFRFRIGALVTNKEEPVELEVKCEF---KD 1020

Query: 911  SRGNNC-FGSYPTHQLNCHIGHGIYGIGFRD 940
              GNN  +  Y     + + G   Y I   D
Sbjct: 1021 RFGNNFDYDIYFEVNKDRYYGEDCYNIAILD 1051


>gi|357468521|ref|XP_003604545.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505600|gb|AES86742.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1092

 Score =  314 bits (805), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 232/654 (35%), Positives = 350/654 (53%), Gaps = 57/654 (8%)

Query: 8   LRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVS 67
           L  L+   S  VR+IGI GMGG+GKTTIA  ++     E+E   FL  V E   + G+  
Sbjct: 250 LESLLRQESEKVRVIGIWGMGGIGKTTIAEEIFKQNCSEYEGCCFLAKVSEELGRHGITF 309

Query: 68  LQRQLLSQLLKLADNSIWNVFDGID-MLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWF 126
           L+ +L S+LL  A++   +  +G+   +  R+ R KVL+V+DDV +  Q++ L G  +W 
Sbjct: 310 LKEKLFSRLL--AEDVKIDSPNGLSSYIERRIGRMKVLIVLDDVKEEGQIEMLFGTLDWL 367

Query: 127 GSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARI 186
            S SRII+T+RD  +L  + VD VY+   L+  EAL+LFN+ AFK         +LS ++
Sbjct: 368 LSDSRIIVTTRDMQVLICNEVDHVYEVGVLDSSEALELFNLNAFKQRHLETVYFELSKKV 427

Query: 187 IRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIF 246
           I YA G+PL L+VL   L G++ + W S L++L+  P  ++ D++++S+D L  LEKK F
Sbjct: 428 IDYAKGIPLVLKVLAHMLRGKNKEVWESQLDKLKRLPVQKVHDVMRLSYDDLDRLEKKYF 487

Query: 247 LDIACFFKGND--RDYVTNFLEGC--GFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQEL 301
           LDIACFF G +   DY+   L+ C       +G+  L +K LIT+  +N + MHD+LQE+
Sbjct: 488 LDIACFFNGLNLKVDYMKLLLKDCESDNSVAVGLERLRDKALITISEDNIISMHDILQEM 547

Query: 302 GQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKA 361
           G+++V+++S  +  KRSRLW  +++C VL    GT+++  I +D         L  S+ A
Sbjct: 548 GREVVRQESSADPRKRSRLWDHDDICDVLENDKGTDVIRSISVDLSGRRK---LMLSSHA 604

Query: 362 FSKMTNLRLLKI-------------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFL 402
           F+KMTNL+ L                     C + LP GL+     LR L W  YPLK  
Sbjct: 605 FAKMTNLQFLDFRGEYEFGEDFLWNQKYDRDCLVLLPQGLQSFPTDLRYLSWMNYPLKSF 664

Query: 403 PSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
           P        + + +  S + +LW G++ L  LK + LS+S+ L  +PDF+ A NL+ L +
Sbjct: 665 PEKFSAKNLVILDLSDSLVEKLWCGVQDLVNLKEVRLSYSKFLKELPDFSKATNLKVLNM 724

Query: 463 EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCL 522
             C  L  +HPS+   +KL+ L++  C SL T      + SL  LNL S        K L
Sbjct: 725 AHCHNLKSVHPSIFSLDKLVHLDLSLCFSLTTFASNSHLSSLHYLNLGS-------CKSL 777

Query: 523 STLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEI 582
            T  V+                +L EL L    I  LP S    S L +L L+    +E 
Sbjct: 778 RTFSVT--------------TYNLIELDLTNICINALPSSFGCQSRLEILVLRYS-EIES 822

Query: 583 LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEV--PSSI 634
           +P ++ NL  LR L +  CSKL   PE+  S++    L ++  S+K V  PS++
Sbjct: 823 IPSSIKNLTRLRKLDIRFCSKLLVLPELPSSVE---TLLVECRSLKTVLFPSTV 873



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 165/397 (41%), Gaps = 73/397 (18%)

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
            LK FPE   S K+L  L L  + ++++   ++ L  L+ + LS  K L  LP    A  +
Sbjct: 661  LKSFPEKF-SAKNLVILDLSDSLVEKLWCGVQDLVNLKEVRLSYSKFLKELPDFSKA-TN 718

Query: 664  LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPS 723
            LK LN++ C  L++V  ++  ++ L  LD+S      + +  S++         +L   +
Sbjct: 719  LKVLNMAHCHNLKSVHPSIFSLDKLVHLDLSLCFSLTTFASNSHLS--------SLHYLN 770

Query: 724  LSGLCSLRKLNLTDCNLME--------GALPSDIGNLCSLKELYLSKNSFVSLPTSITHL 775
            L    SLR  ++T  NL+E         ALPS  G    L+ L L  +   S+P+SI +L
Sbjct: 771  LGSCKSLRTFSVTTYNLIELDLTNICINALPSSFGCQSRLEILVLRYSEIESIPSSIKNL 830

Query: 776  SKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLL------DALKLCKSDSTMIAC 829
            ++L  +++  C +L  LP+LP ++  + V  C SL T+L      +  K  K       C
Sbjct: 831  TRLRKLDIRFCSKLLVLPELPSSVETLLVE-CRSLKTVLFPSTVSEQFKENKKRIEFWNC 889

Query: 830  LDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSV-----------------------VVPG 866
             +    L   SL    L   +  +  T QHLS                        V PG
Sbjct: 890  WN----LDEHSLINIGLNLQMNLIKFTYQHLSTLEHDHVESYVDYKDNFDSYQAVYVYPG 945

Query: 867  SEIPEWFMYQNEGSSITVT-RPSNLYNKKKLVGYAICCVF--------HVLKNSRGNNCF 917
            S IPEW  Y+     + V   P  L     L+G+  C V          +  N   N+  
Sbjct: 946  SSIPEWLEYKTTKDDMIVDLSPHYL---SPLLGFVFCFVLAKDIHYCDRIELNITTNDAE 1002

Query: 918  GSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLY 954
            G      +N ++     GI          SDH+ ++Y
Sbjct: 1003 GDDEKGGVNIYMDRTRLGI---------ASDHVCMIY 1030


>gi|12322541|gb|AAG51270.1|AC027135_11 disease resistance gene, putative [Arabidopsis thaliana]
          Length = 1198

 Score =  314 bits (805), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 251/764 (32%), Positives = 381/764 (49%), Gaps = 84/764 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV---- 56
           ++    ++  L+   S +VRM+GI G  G+GKTTIAR ++  +S  F+ S F+D      
Sbjct: 186 IEDHIAEMSLLLQLESKEVRMVGISGSSGIGKTTIARALFKRLSRHFQGSTFIDRAFVSY 245

Query: 57  -REISSKGG------LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDD 109
            R I S          + LQ   LS++L   D  I    D    L  RL+ +KVL++IDD
Sbjct: 246 SRNIYSGANPDDPNMKLQLQGHFLSEILGKKDIKI----DDPAALEERLKHQKVLIIIDD 301

Query: 110 VVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKA 169
           + D+  L +L G  +WFG GSRII+ + D+H L  HG+D +Y+        A Q+    A
Sbjct: 302 LDDIMVLDTLVGQTQWFGYGSRIIVVTNDKHFLIAHGIDHIYEVSFPTDVHACQMLCQSA 361

Query: 170 FKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLE--IEPPSEI 227
           FK     +    L   ++R+AG  PL L +LG +L  R ++ W   L RLE  +    +I
Sbjct: 362 FKQNYAPKGFEDLVVDVVRHAGNFPLGLNLLGKYLRRRDMEYWMDMLPRLENSLRIDGKI 421

Query: 228 LDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV 287
             IL+IS+DGL+  +++IF  IAC F   +   + + L          +  L +K LI V
Sbjct: 422 EKILRISYDGLESEDQEIFRHIACLFNHMEVTTIKSLLADSDVS--FALENLADKSLIHV 479

Query: 288 HNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNY 347
               + MH  LQE+G++IV+ QS ++ G+R  L    ++  +L   TGT+ V GI LD  
Sbjct: 480 RQGYVVMHRSLQEMGRKIVRIQSIDKPGEREFLVDPNDIHDILNACTGTQKVLGISLD-- 537

Query: 348 HHENEVYLCASAKAFSKMTNLRLLKICN-------LQLPNGLEYLSNRLRLLGWRGYPLK 400
              N   L    +AF  M+NLR L+I N       L LP   +YL   L+LL W  +P++
Sbjct: 538 -IRNIRELDVHERAFKGMSNLRFLEIKNFGLKEDGLHLPPSFDYLPRTLKLLCWSKFPMR 596

Query: 401 FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
            +P   + +  +++ M YS++ +LW+G+  L  LK M L  S NL  +PD + A NLE L
Sbjct: 597 CMPFGFRPENLVKLEMQYSKLHKLWEGVAPLTCLKEMDLHGSSNLKVIPDLSEATNLEIL 656

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPT 514
            L+ C  L E+  S+   NKL+ L+M +C SL  LP    +KSL++LN      LK+ P 
Sbjct: 657 NLKFCESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGFNLKSLDRLNLYHCSKLKTFPK 716

Query: 515 TISGLKCL-----------STLDVSGDLKFREFPEIVEHME-----------------HL 546
             + +  L           S L +   ++FR   E  +  +                  L
Sbjct: 717 FSTNISVLNLNLTNIEDFPSNLHLENLVEFRISKEESDEKQWEEEKPLTPFLAMMLSPTL 776

Query: 547 SELHLEGTAIRGLPLSIELLSGLVLLN------LKNCRSLEILPVTVSNLKCLRSLKLSG 600
           + LHLE      LP  +EL S    LN      + NC +LE LP  + NL+ L  L  SG
Sbjct: 777 TSLHLE-----NLPSLVELTSSFQNLNQLKDLIIINCINLETLPTGI-NLQSLDYLCFSG 830

Query: 601 CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           CS+L+ FPEI     ++S L+LD T+I+EVP  IE  + L  L+++ C  L  +   +  
Sbjct: 831 CSQLRSFPEI---STNISVLYLDETAIEEVPWWIEKFSNLTELSMNSCSRLKCVFLHMSK 887

Query: 661 LKSLKTLNLSGCFKLENV-----PETLGQIESLEELDISGTAVP 699
           LK LK      C  L  V     P  + ++   + +D + +++P
Sbjct: 888 LKHLKEALFRNCGTLTRVELSGYPSGM-EVMKADNIDTASSSLP 930



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 117/511 (22%), Positives = 204/511 (39%), Gaps = 115/511 (22%)

Query: 489  CTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSE 548
            C      P  ++   ++   L  L   ++ L CL  +D+ G    +  P++ E   +L  
Sbjct: 597  CMPFGFRPENLVKLEMQYSKLHKLWEGVAPLTCLKEMDLHGSSNLKVIPDLSE-ATNLEI 655

Query: 549  LHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKF 607
            L+L+   ++  LP SI  L+ L+ L++ NC+SL+ILP T  NLK L  L L  CSKLK F
Sbjct: 656  LNLKFCESLVELPSSIRNLNKLLNLDMLNCKSLKILP-TGFNLKSLDRLNLYHCSKLKTF 714

Query: 608  PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL------------------------- 642
            P+      ++S L L+ T+I++ PS++ L   +E                          
Sbjct: 715  PKFS---TNISVLNLNLTNIEDFPSNLHLENLVEFRISKEESDEKQWEEEKPLTPFLAMM 771

Query: 643  -------LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
                   L+L +  +LV L SS   L  LK L +  C  LE +P  +  ++SL+ L  SG
Sbjct: 772  LSPTLTSLHLENLPSLVELTSSFQNLNQLKDLIIINCINLETLPTGIN-LQSLDYLCFSG 830

Query: 696  TAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSL 755
             +   S                    P +S   S+                         
Sbjct: 831  CSQLRS-------------------FPEISTNISV------------------------- 846

Query: 756  KELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQ----SLPQLPPNIRQVRVNGCASLV 811
              LYL + +   +P  I   S L  + +  C RL+     + +L  ++++     C +L 
Sbjct: 847  --LYLDETAIEEVPWWIEKFSNLTELSMNSCSRLKCVFLHMSKL-KHLKEALFRNCGTLT 903

Query: 812  TL-----LDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLRE-YLEAVSNTRQHLSVVVP 865
             +        +++ K+D+   A     K++ +    F++  E  L    +   +  +   
Sbjct: 904  RVELSGYPSGMEVMKADNIDTASSSLPKVVLSFLDCFNLDPETVLHHQESIIFNYMLFTG 963

Query: 866  GSEIPEWFMYQNEGSS--------ITVTRP-------SNLYNKKKLVGYAICCVFHVLKN 910
              E+P +F Y+  GSS        + +++P       + + NK++ V   + C F   K+
Sbjct: 964  KEEVPSYFTYRTTGSSSLTIPILHVHLSQPFFRFRIGALVTNKEEPVELEVKCEF---KD 1020

Query: 911  SRGNNC-FGSYPTHQLNCHIGHGIYGIGFRD 940
              GNN  +  Y     + + G   Y I   D
Sbjct: 1021 RFGNNFDYDIYFEVNKDRYYGEDCYNIAILD 1051


>gi|357499485|ref|XP_003620031.1| Resistance-gene protein [Medicago truncatula]
 gi|355495046|gb|AES76249.1| Resistance-gene protein [Medicago truncatula]
          Length = 813

 Score =  314 bits (804), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 216/607 (35%), Positives = 335/607 (55%), Gaps = 62/607 (10%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + SR + ++  +D  S D V M+G+ G GG+GK+T+A+ +Y+ I+ +FE   FL+NVR  
Sbjct: 192 LQSRVQHVKGHLDEKSDDEVHMVGLYGTGGIGKSTLAKAIYNFIADQFEVLCFLENVRVN 251

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+   L  LQ +LL + ++L D  +  V  GI ++  RL RKK+LL++DDV  + QL++L
Sbjct: 252 STSDNLKHLQEKLLLKTVRL-DIKLGGVSQGIPIIKQRLCRKKILLILDDVDKLDQLEAL 310

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG GSR+IIT+R++HLLK HG++  +   GLN  EAL+L    AFK   P    
Sbjct: 311 AGGLDWFGPGSRVIITTRNKHLLKIHGIESTHAVEGLNATEALELLRWMAFKENVPSSHE 370

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             L+ R + YA GLPLA+ ++GS L GRSV +  STL+  E  P  EI  IL++S+D L+
Sbjct: 371 DILN-RALTYASGLPLAIVIIGSNLVGRSVQDSMSTLDGYEEIPNKEIQRILKVSYDSLE 429

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVI-GIRVLIEKCLIT--VHNNTLWMHD 296
           + E+ +FLDIAC FKG     V   L     H ++  + VL EK L+    +++ + +HD
Sbjct: 430 KEEQSVFLDIACCFKGCKWPEVKEILHAHYGHCIVHHVAVLAEKSLMDHLKYDSYVTLHD 489

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           L++++G+++V+++SP+E G+RSRLW E ++ HVL ++TGT  ++ I +     E+++   
Sbjct: 490 LIEDMGKEVVRQESPDEPGERSRLWFERDIVHVLKKNTGTRKIKMINMKFPSMESDIDW- 548

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            +  AF KMTNL+     N      LEYL + LR++  +G                    
Sbjct: 549 -NGNAFEKMTNLKTFITENGHHSKSLEYLPSSLRVM--KG-------------------- 585

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
           C  +        K  + +KV+IL++ E L  +PD +G PNLEK     C  L  IH SL 
Sbjct: 586 CIPKSPSSSSSNKKFEDMKVLILNNCEYLTHIPDVSGLPNLEKFSFVRCHNLVTIHNSLR 645

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
             N+L ILN + C  L + P            L+S P+       L  L++S     + F
Sbjct: 646 YLNRLEILNAEGCEKLESFPP-----------LQS-PS-------LQNLELSNCKSLKSF 686

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKC--LR 594
           PE++  M ++  + L+ T+I     S + LS            L  L ++ +NLK   L+
Sbjct: 687 PELLCKMTNIKSILLKETSIEKFQSSFQNLS-----------ELSHLTISSANLKINLLK 735

Query: 595 SLKLSGC 601
            L+L  C
Sbjct: 736 ILRLDEC 742



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 11/111 (9%)

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
           S+  L+ L +LN + C  LE  P   S    L++L+LS C  LK FPE++  M ++  + 
Sbjct: 643 SLRYLNRLEILNAEGCEKLESFPPLQS--PSLQNLELSNCKSLKSFPELLCKMTNIKSIL 700

Query: 622 LDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC 672
           L  TSI++  SS + L++L  L +S         S+ + +  LK L L  C
Sbjct: 701 LKETSIEKFQSSFQNLSELSHLTIS---------SANLKINLLKILRLDEC 742


>gi|227438143|gb|ACP30561.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1005

 Score =  313 bits (803), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 237/712 (33%), Positives = 369/712 (51%), Gaps = 66/712 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV---- 56
           +D    K+  L+     +VRM+GI G  G+GKTTIAR ++  +S  F++S F+D      
Sbjct: 62  IDDHIAKMSVLLHMECEEVRMVGIWGSSGIGKTTIARALFSRLSRHFQSSIFIDRAFISK 121

Query: 57  -REISSKGG------LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDD 109
             EI S+G        ++LQR  LS++L   D  I    D +  L  RL+  KVL++IDD
Sbjct: 122 SMEIYSRGNPDDYNMKLNLQRNFLSEILDKKDIKI----DHLGALAERLKYHKVLIIIDD 177

Query: 110 VVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKA 169
           + D   L +LAG  +WFG GSRII  ++D+H+L  HG++ +Y+    +   ALQ+    A
Sbjct: 178 LDDQVVLDTLAGQAQWFGRGSRIIAITKDKHILTAHGINHIYEVKLPSEKLALQILCQSA 237

Query: 170 FKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILD 229
           F+   P    ++L+  ++     LPL L VLGS L G   + W   L RL      +I  
Sbjct: 238 FRKNSPPHGYLELACEVVERVDSLPLGLNVLGSHLRGEDKEYWLDQLSRLRKGIDGKIHK 297

Query: 230 ILQISFDGLQELE-KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH 288
            L++S+DGL   E K +F  IAC F  +    +   L        +G+R L +  LI + 
Sbjct: 298 TLRVSYDGLNNKEDKALFRHIACLFNYSGIIEIKKLLADSDLDVNMGLRNLNDNSLIQIR 357

Query: 289 NNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYH 348
             T+ MH LLQE+G+++V+ QS E  GKR  L   +++C+VL E  G++ V GI L+   
Sbjct: 358 RQTVVMHSLLQEMGKEVVRSQSNEP-GKREFLTDSKDICNVLEEDIGSKNVLGISLNKDE 416

Query: 349 HENEVYLCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLK 400
            + +  L     AF  M NLR L I          L L  GL+YL  +LRLL W  YP++
Sbjct: 417 IDEKDELHVHNSAFKGMRNLRFLNIYTNQSMTKDRLHLLEGLDYLPPKLRLLSWDRYPMR 476

Query: 401 FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
            +PS       +++ M  S++ +LW+GI +L  L  M LS SENL  +PD + A NL+ L
Sbjct: 477 CMPSKFCPKYLVKLKMQGSKLEKLWEGIGNLTCLDYMDLSESENLKEIPDLSLATNLKTL 536

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK------SLP- 513
            L GC+ L ++  S+   +KL+ L M  C +L TLP  I ++SL  ++L+      S P 
Sbjct: 537 NLSGCSSLVDLPLSIRNLSKLMTLEMSGCINLRTLPSGINLQSLLSVDLRKCSELNSFPD 596

Query: 514 --TTISGLKCLSTL--DVSGDLKFREFPEI-VEHMEH--------------------LSE 548
             T IS L    T   ++  +L+ +    + +E ++                     L++
Sbjct: 597 ISTNISDLDLNETAIEEIPSNLRLQNLVSLRMERIKSERLWASVQSLAALMTALTPLLTK 656

Query: 549 LHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKF 607
           L+L   T++  LP S + L+ L  L +  C  LE LP T  N++ L  L LSGC++L+ F
Sbjct: 657 LYLSNITSLVELPSSFQNLNKLEQLRITECIYLETLP-TGMNIESLDYLDLSGCTRLRSF 715

Query: 608 PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSII 659
           PEI     ++S + L+ T I+E+  +   ++++     S C +    PS+++
Sbjct: 716 PEIS---TNISTINLNNTGIEELEKADFTVSRIHSNKASWCDS----PSAVV 760



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 197/428 (46%), Gaps = 79/428 (18%)

Query: 569 LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSI 627
           LV L ++  + LE L   + NL CL  + LS    LK+ P++  +  +L  L L G +S+
Sbjct: 487 LVKLKMQGSK-LEKLWEGIGNLTCLDYMDLSESENLKEIPDLSLAT-NLKTLNLSGCSSL 544

Query: 628 KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
            ++P SI  L+KL  L +S C NL  LPS I  L+SL +++L  C +L + P+    I  
Sbjct: 545 VDLPLSIRNLSKLMTLEMSGCINLRTLPSGI-NLQSLLSVDLRKCSELNSFPDISTNISD 603

Query: 688 LEELDISGTAVPHSTSWYSYIPINLMR----------KSVALKLPSLSGLCSLRKLNLTD 737
           L+  + +   +P +    + + + + R          +S+A  + +L+ L  L KL L++
Sbjct: 604 LDLNETAIEEIPSNLRLQNLVSLRMERIKSERLWASVQSLAALMTALTPL--LTKLYLSN 661

Query: 738 -CNLMEGALPSDIGNLCSLKELYLSKNSFV-SLPTSITHLSKLLNIELEDCKRLQSLPQL 795
             +L+E  LPS   NL  L++L +++  ++ +LPT + ++  L  ++L  C RL+S P++
Sbjct: 662 ITSLVE--LPSSFQNLNKLEQLRITECIYLETLPTGM-NIESLDYLDLSGCTRLRSFPEI 718

Query: 796 PPNIRQVRVN--GCASL------VTLLDALKL--CKSDSTMIACLD------SLKLLGNK 839
             NI  + +N  G   L      V+ + + K   C S S ++   D      +L      
Sbjct: 719 STNISTINLNNTGIEELEKADFTVSRIHSNKASWCDSPSAVVMETDNVHVHRTLSAPKEA 778

Query: 840 SLAFSMLREYLEAVS-------NTRQHLSV----VVPGSEIPEWFMYQNEGSSITVTRPS 888
           S +  + + YL+ V+          Q LSV    + PG  +P +F +++ G S+T+    
Sbjct: 779 SSSTYVPKLYLKFVNCFILSQEALLQELSVLKGLIFPGEVVPSYFTHRSIGCSLTIPLLH 838

Query: 889 N--------------------LYNKKKLVGYAICCVFHVLKNSRGNNCFGSY-------P 921
           N                    LY     +   ICC F    + R  N F S+       P
Sbjct: 839 NSLSVPFFRFRACAMVELDLRLYPLSPYIVIQICCRF----SDRFGNSFQSFGQPHSFTP 894

Query: 922 THQLNCHI 929
            HQ   H+
Sbjct: 895 YHQKGSHL 902


>gi|15241561|ref|NP_198701.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758062|dbj|BAB08641.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332006983|gb|AED94366.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 986

 Score =  313 bits (803), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 223/621 (35%), Positives = 326/621 (52%), Gaps = 41/621 (6%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-----ISSKGGLVSLQRQLL 73
           VR++GICG  G+GKTTIAR +  L+S  F+ S F++NVR      +   G  + LQ +LL
Sbjct: 199 VRIVGICGPAGIGKTTIARALQSLLSSNFQRSCFMENVRGSLNIGLDEYGLKLDLQERLL 258

Query: 74  SQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRII 133
           S+++      I    + +  +  RL  +KVL+++DDV D+  L +LA    WFG GSRII
Sbjct: 259 SKIMNQKGMRI----EHLGTIRDRLHDQKVLIILDDVNDL-DLYALADQTTWFGPGSRII 313

Query: 134 ITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGL 193
           +T+ D  LL+ H ++ VY     +  EAL++F   AF+        ++L+ R+    G L
Sbjct: 314 VTTEDNELLQKHDINNVYHVDFPSRKEALEIFCRCAFRQSSAPDTILKLAERVTELCGNL 373

Query: 194 PLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFF 253
           PL L V+GS L G++ DEW   + RLEI    +    L++ +D L E E+ +FL IA FF
Sbjct: 374 PLGLCVIGSSLHGKTEDEWEILIRRLEISLDRDNEAQLRVGYDSLHENEQALFLSIAVFF 433

Query: 254 KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELGQQIVQRQSPE 312
              DR  V   L         G+R L  K LI +  N  + MH+LLQ +G+Q +QRQ P 
Sbjct: 434 NYKDRQLVMAMLLDSNLDVEYGLRTLANKSLIHISRNEKIVMHNLLQHVGRQAIQRQEP- 492

Query: 313 ELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLK 372
              KR  L   +E+C+VL   T   +V GI  D      EV+L  S +AF ++ NL+ L+
Sbjct: 493 --WKRHILIDADEICNVLENDTDARIVSGISFD-ISRIGEVFL--SERAFKRLCNLQFLR 547

Query: 373 ICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGEL 424
           +          +++P  +E+   RLRLL W  YP + L   L ++  +E+ M  S + +L
Sbjct: 548 VFKTGYDEKNRVRIPENMEF-PPRLRLLQWEAYPRRSLSLKLNLEYLVELDMEGSLLEKL 606

Query: 425 WKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIIL 484
           W G + L  LK M LS S  L ++PD + A NLE+L L  C  L E+  S    +KL  L
Sbjct: 607 WDGTQPLANLKKMSLSSSWYLKKLPDLSNATNLEELDLRACQNLVELPSSFSYLHKLKYL 666

Query: 485 NMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
           NM  C  L  +P  I +KSLE +N      LKS P   +    +S+LD+S    + +  E
Sbjct: 667 NMMGCRRLKEVPPHINLKSLELVNMYGCSRLKSFPDISTN---ISSLDIS----YTDVEE 719

Query: 539 IVEHMEHLSELH-LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
           + E M   S L  LE    R L +   +   L  L+L   R +E +P  + N+  L+ L 
Sbjct: 720 LPESMTMWSRLRTLEIYKSRNLKIVTHVPLNLTYLDLSETR-IEKIPDDIKNVHGLQILF 778

Query: 598 LSGCSKLKKFPEIVRSMKDLS 618
           L GC KL   PE+  S+  LS
Sbjct: 779 LGGCRKLASLPELPGSLLYLS 799



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 163/376 (43%), Gaps = 58/376 (15%)

Query: 518 GLKCLSTLDVSGDLKFR-EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
            L+ L       D K R   PE +E    L  L  E    R L L + L   LV L+++ 
Sbjct: 542 NLQFLRVFKTGYDEKNRVRIPENMEFPPRLRLLQWEAYPRRSLSLKLNL-EYLVELDMEG 600

Query: 577 CRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIE 635
              LE L      L  L+ + LS    LKK P++  +  +L EL L    ++ E+PSS  
Sbjct: 601 SL-LEKLWDGTQPLANLKKMSLSSSWYLKKLPDLSNAT-NLEELDLRACQNLVELPSSFS 658

Query: 636 LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
            L KL+ LN+  C+ L  +P  I  LKSL+ +N+ GC +L++ P+    I SL   DIS 
Sbjct: 659 YLHKLKYLNMMGCRRLKEVPPHI-NLKSLELVNMYGCSRLKSFPDISTNISSL---DISY 714

Query: 696 TAV---PHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEG---ALPSDI 749
           T V   P S + +S +    + KS  LK+       +   LNLT  +L E     +P DI
Sbjct: 715 TDVEELPESMTMWSRLRTLEIYKSRNLKI------VTHVPLNLTYLDLSETRIEKIPDDI 768

Query: 750 GNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCAS 809
            N+  L+ L+L                         C++L SLP+LP ++  +  N C S
Sbjct: 769 KNVHGLQILFLG-----------------------GCRKLASLPELPGSLLYLSANECES 805

Query: 810 LVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEA-VSNTRQHLSVVVPGSE 868
           L ++         + +   C             F + +E     +  +  H    +PG E
Sbjct: 806 LESVSCPFNTSYMELSFTNC-------------FKLNQEARRGIIQQSFSHGWASLPGRE 852

Query: 869 IPEWFMYQNEGSSITV 884
           +P    +++ G SITV
Sbjct: 853 LPTDLYHRSTGHSITV 868


>gi|227438235|gb|ACP30607.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1128

 Score =  313 bits (802), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 246/742 (33%), Positives = 369/742 (49%), Gaps = 92/742 (12%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +++R ++L   ++        +G+ GM G+GKTT+ +++Y+   H+F    FL +VR++ 
Sbjct: 205 IETRLKQLEEKLEFDCESTLTVGVVGMPGIGKTTLTKMLYEKWQHKFLRCVFLHDVRKLW 264

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFD-GIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
               +   +   + +LLK  D S     D   + L + L  KK L+V+D+V D KQ++ L
Sbjct: 265 QDRMMD--RNIFMRELLKDDDLSQQVAADLSPESLKALLLSKKSLVVLDNVTDKKQIEVL 322

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAF----KTYQP 175
            G  +W   GS I IT+ D+ +++   VD+ Y+   L+  E+ Q F+  AF      Y P
Sbjct: 323 LGECDWIKKGSLIFITTSDKSVIEGK-VDDTYEVLRLSGRESFQYFSYFAFGGGKHYYTP 381

Query: 176 LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
               + LS     YA G PLAL++LG  L+G+    W   L +L   P   I ++LQIS+
Sbjct: 382 KGNFMNLSRLFADYAKGNPLALKILGVELNGKDETHWEDKLSKLAQSPDKTIQNVLQISY 441

Query: 236 DGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMH 295
           DGL EL K +FLD+ACFF+  D  YV   +E C       I+ L  K  I +    + MH
Sbjct: 442 DGLSELHKNVFLDVACFFRSGDEYYVKCLVESCDSE----IKDLASKFFINISGGRVEMH 497

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DLL   G+++  + S        RLW  + V   L +  G E V GI LD    + ++ L
Sbjct: 498 DLLYTFGKELGLQGS-------RRLWNHKGVVGALKKRAGAESVRGIFLDMSELKKKLPL 550

Query: 356 CASAKAFSKMTNLRLLKI------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLP 403
                 FS M NLR LK             C L  P GLE+  + +R L W  +PLK LP
Sbjct: 551 --EKCTFSGMRNLRYLKFYNSCCHRECEADCKLSFPEGLEFPLDEVRYLYWLKFPLKKLP 608

Query: 404 SNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
            +       ++ + YS I E+W+G+K   KLK + LSHS  L ++     A +L++L LE
Sbjct: 609 KDFNPKNLTDLSLPYSEIEEIWEGVKATPKLKWVDLSHSSKLSKLSGLQNAESLQRLSLE 668

Query: 464 GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLS 523
           GC  L E+   +     L+ LNM+ CTSL  LP          +NL S+ T I  L   S
Sbjct: 669 GCKSLQELPREMNHMKSLVFLNMRGCTSLRFLP---------HMNLISMKTLI--LTNCS 717

Query: 524 TLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEIL 583
           +L        +EF  I +++E    L L+GTAI  LP ++  L  L++LNLK+C  LE +
Sbjct: 718 SL--------QEFRVISDNLE---TLKLDGTAISQLPANMVKLQRLMVLNLKDCIMLEAV 766

Query: 584 PVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPS----------- 632
           P ++  LK L+ L LSGCSKLK FP  + +MK L  L LD T+I ++P            
Sbjct: 767 PESLGKLKKLQELVLSGCSKLKTFPIPIENMKRLQILLLDTTAITDMPKILQFNSQIKCG 826

Query: 633 -----------------------SIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNL 669
                                  +I  L  L LL++  CKNL  +P   +   +L+ L+ 
Sbjct: 827 MNGLSSLRHLCLSRNNMITNLQVNISQLHHLRLLDVKYCKNLTSIP---LLPPNLEVLDA 883

Query: 670 SGCFKLENVPETLGQIESLEEL 691
            GC KL+ V   L  ++ +E++
Sbjct: 884 HGCEKLKTVATPLALLKLMEQV 905



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 224/478 (46%), Gaps = 60/478 (12%)

Query: 540  VEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKL 598
            +++ E L  L LEG  +++ LP  +  +  LV LN++ C SL  LP    NL  +++L L
Sbjct: 656  LQNAESLQRLSLEGCKSLQELPREMNHMKSLVFLNMRGCTSLRFLPHM--NLISMKTLIL 713

Query: 599  SGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSI 658
            + CS L++F  I  +++ L    LDGT+I ++P+++  L +L +LNL DC  L  +P S+
Sbjct: 714  TNCSSLQEFRVISDNLETLK---LDGTAISQLPANMVKLQRLMVLNLKDCIMLEAVPESL 770

Query: 659  IALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVA 718
              LK L+ L LSGC KL+  P  +  ++ L+ L +  TA+   T     +  N   K   
Sbjct: 771  GKLKKLQELVLSGCSKLKTFPIPIENMKRLQILLLDTTAI---TDMPKILQFNSQIKC-- 825

Query: 719  LKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
                 ++GL SLR L L+  N++                         +L  +I+ L  L
Sbjct: 826  ----GMNGLSSLRHLCLSRNNMI------------------------TNLQVNISQLHHL 857

Query: 779  LNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCK------SDSTMIACLDS 832
              ++++ CK L S+P LPPN+  +  +GC  L T+   L L K      S      C ++
Sbjct: 858  RLLDVKYCKNLTSIPLLPPNLEVLDAHGCEKLKTVATPLALLKLMEQVHSKFIFTNC-NN 916

Query: 833  LKLLGNKSLAFSMLREYLEAVSNTRQHLSVV-VPGSEIPEWFMYQNEGSSITVTRPSNLY 891
            L+ +   S+     R+  +   N  + L +   PGSE+P WF ++  GSS+ +  P + +
Sbjct: 917  LEQVAKNSITVYAQRKSQQDAGNVSEALLITSFPGSEVPSWFNHRTIGSSLKLKFPPH-W 975

Query: 892  NKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGI-----YGIGFRDKFGQAG 946
               +L    +C V          N F    T +    +G  +      G G+ +   +  
Sbjct: 976  CDNRLSTIVLCAVVSFPCTQDEINRFSIECTCEFTNELGTCVRFSCTLGGGWIEP-REID 1034

Query: 947  SDHLWLLYLSRQTCYDIRLPLESNLEPFE--SNHVNVSFEPWLGQGLEVKMCGLHPVY 1002
            SDH+++ Y S   C  +R  +E + E  +      ++ FE   G G E+  CGL  VY
Sbjct: 1035 SDHVFIGYTS---CSHLRNHVEGSGEHHKCVPTEASIEFEVRDGAG-EIVNCGLSLVY 1088


>gi|227438243|gb|ACP30611.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1050

 Score =  313 bits (801), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 245/707 (34%), Positives = 365/707 (51%), Gaps = 65/707 (9%)

Query: 11  LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLD---------NVREIS- 60
           L+   +  V M+GI G  G+GK+TIAR ++  +S+ F+   F+D         N R I+ 
Sbjct: 199 LLSMDAEQVLMVGIWGPSGIGKSTIARALFGRLSYRFQRCVFIDRSFIDKTLENFRRINL 258

Query: 61  -SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
              G  + LQ + LS++L   D  I    D + +LG RLQ  KVL+V+DDV D   L +L
Sbjct: 259 DDYGVKLQLQEKFLSEILDHKDVKI----DHLGVLGGRLQNHKVLIVLDDVDDRLLLDAL 314

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G   WFGSGSRII+ ++D HLL++HG++ VY+    + D+AL++F   AFK   P    
Sbjct: 315 VGQTLWFGSGSRIIVVTKDVHLLRSHGIERVYEVGFPSEDQALEMFCQSAFKRNSPADGF 374

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           + L+  + + AG LPL L +LGS L GR+ ++W   L  L      +I   L+  +D L+
Sbjct: 375 MDLAVEVSKLAGNLPLGLNLLGSSLRGRNKEDWIDMLPELRTCLNGDIERTLRFGYDRLK 434

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN---TLWMHD 296
           E  K++FL IAC F G   D +   L         G+RVL+E+ LI +  +   T+ MH+
Sbjct: 435 ETHKRLFLHIACLFNGEKVDSLKWLLADSDVDVNTGLRVLVERSLIRITTHLCKTVEMHN 494

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           LLQE+G+ +V  QS +E G+R  L   + +C VL +++GT+ V GI   N     E++  
Sbjct: 495 LLQEMGRGMVSAQSFDEPGERQFLTDSKNICDVLEDNSGTKAVLGISW-NISEIAELF-T 552

Query: 357 ASAKAFSKMTNLRLLKI----------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNL 406
               AF  M NLR LKI            L LP G++ LS RLRLL W  YP+  +PS+ 
Sbjct: 553 LDEDAFKGMRNLRFLKIYKNPLERNEETKLYLPQGIQSLSRRLRLLHWDAYPMSRMPSDF 612

Query: 407 QMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
                +E+ M  S + ++W+G + L  LK M L  S+ L  +PD + APNLE+L L  C 
Sbjct: 613 SPAYLVELGMIDSELEKMWEGPQPLKYLKNMSLWRSKKLKEVPDLSKAPNLEELYLADCQ 672

Query: 467 RLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLD 526
            L  +  S+     L  LNM++C+ L  LP  I                   L+ LS L 
Sbjct: 673 SLEMLPSSIRYLKNLKTLNMEECSKLEFLPTNI------------------NLESLSNLT 714

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVT 586
           + G    R FP+I     ++S L LE TAI  +P  IE ++GL  L +  C  L  +   
Sbjct: 715 LYGCSLIRSFPDI---SHNISVLSLENTAIEEVPWWIEKMTGLTGLFMSGCGKLSRISPN 771

Query: 587 VSNLKCLRSLKLSGCSKL-----KKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLE 641
           +S LK L  +  S C  L     +  P++V +   + +L +   +   +P S+ +  K +
Sbjct: 772 ISKLKHLEDVDFSLCYALTEDSWQDDPQVVPAPNPIGDLDMSDNTFTRLPHSL-VSIKPQ 830

Query: 642 LLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV------PETL 682
            LN+ +C+ LV LP   +   SLK L    C  LE++      PET+
Sbjct: 831 ELNIGNCRKLVSLPE--LQTSSLKILRAQDCESLESISHLFRNPETI 875


>gi|27466164|gb|AAN86124.1| TIR-NBS-LRR [Arabidopsis thaliana]
          Length = 1055

 Score =  313 bits (801), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 228/693 (32%), Positives = 363/693 (52%), Gaps = 60/693 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-- 58
           M++   +L+ L+   S +V+MIGI G  G+GKTTIAR ++D +S  F    F++N++   
Sbjct: 189 MEAHLTELKSLLSLESDEVKMIGIWGPAGIGKTTIARALFDRLSSIFPLICFMENLKGSL 248

Query: 59  --ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQL 116
             ++     + LQ QLLS++L   +  I +    +  +  RL  ++VL+++DDV D++QL
Sbjct: 249 TGVADHDSKLRLQNQLLSKILNQENMKIHH----LGAIRERLHDQRVLIILDDVDDLEQL 304

Query: 117 QSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
           + LA +  WFGSGSRII+T+ D+ +LK H + ++Y  +  +  EAL++  +  FK     
Sbjct: 305 EVLAEDPSWFGSGSRIIVTTEDKKILKAHRIKDIYHVNFPSKKEALEILCLSTFKQSSIP 364

Query: 177 QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
               +L+ ++    G LPL L V+GS L G S  EW   L  +E     +I   L++ ++
Sbjct: 365 DGFEELANKVAELCGNLPLGLRVVGSSLRGESKQEWELQLSSIEASLDGKIETTLKVGYE 424

Query: 237 GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMH 295
            L +  + +FL IACFF   + DYVT  L         G  +L ++ L+ +     + MH
Sbjct: 425 RLSKKNQSLFLHIACFFNNQEVDYVTALLADRNLDVGNGFNILADRSLVRISTYGDIVMH 484

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
            LLQ+LG+QIV  QS +E GKR  + + EE+  VLT+ TGT  V+GI  D  + E    +
Sbjct: 485 HLLQQLGRQIVHEQS-DEPGKREFIIEPEEIRDVLTDETGTGSVKGISFDASNSEE---V 540

Query: 356 CASAKAFSKMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
                AF  M NL+ L+I          LQ+P  ++YL   +RLL W  YP K LP    
Sbjct: 541 SVGKGAFEGMPNLQFLRIYREYFNSEGTLQIPEDMKYLP-PVRLLHWENYPRKSLPQRFH 599

Query: 408 MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
            +  ++IYM  S++ +LW GI+ L  +K + LS S  L  +P+ + A NLE L L  C  
Sbjct: 600 PEHLVKIYMPRSKLKKLWGGIQPLPNIKSIDLSFSIRLKEIPNLSNATNLETLNLTHCKT 659

Query: 468 LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDV 527
           L E+  S+   +KL  L M  C +L  +P  I + SLE+                  LD+
Sbjct: 660 LVELPSSISNLHKLKKLKMSGCENLRVIPTNINLASLER------------------LDM 701

Query: 528 SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNC----RSLEIL 583
           SG  + R FP+I  +++    L+L  T I  +P S+   S L+ LN+ +C    R + + 
Sbjct: 702 SGCSRLRTFPDISSNID---TLNLGDTKIEDVPPSVGCWSRLIQLNI-SCGPLTRLMHVP 757

Query: 584 PVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELL 643
           P       C+  L L G S +++ PE +  +  L  L ++  S  ++ S + L + L+ L
Sbjct: 758 P-------CITILILKG-SDIERIPESIIGLTRLHWLIVE--SCIKLKSILGLPSSLQGL 807

Query: 644 NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
           + +DC +L R+  S      +  LN + C KL+
Sbjct: 808 DANDCVSLKRVRFSF--HNPIHILNFNNCLKLD 838



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 134/288 (46%), Gaps = 27/288 (9%)

Query: 602 SKLKKFPEIVRSMKDLSELFLD-GTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           SKLKK    ++ + ++  + L     +KE+P+ +   T LE LNL+ CK LV LPSSI  
Sbjct: 611 SKLKKLWGGIQPLPNIKSIDLSFSIRLKEIPN-LSNATNLETLNLTHCKTLVELPSSISN 669

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA----VPHSTSWYSYIPINLMRKS 716
           L  LK L +SGC  L  +P  +  + SLE LD+SG +     P  +S  +   +NL    
Sbjct: 670 LHKLKKLKMSGCENLRVIPTNI-NLASLERLDMSGCSRLRTFPDISS--NIDTLNLGDTK 726

Query: 717 VALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLS 776
           +    PS+     L +LN++ C    G L   +     +  L L  +    +P SI  L+
Sbjct: 727 IEDVPPSVGCWSRLIQLNIS-C----GPLTRLMHVPPCITILILKGSDIERIPESIIGLT 781

Query: 777 KLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLL 836
           +L  + +E C +L+S+  LP +++ +  N C SL                 +  + + +L
Sbjct: 782 RLHWLIVESCIKLKSILGLPSSLQGLDANDCVSL------------KRVRFSFHNPIHIL 829

Query: 837 GNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
            N +    +  E    +        + +PG  IPE F ++  G SIT+
Sbjct: 830 -NFNNCLKLDEEAKRGIIQRSVSGYICLPGKNIPEEFTHKATGRSITI 876


>gi|357499885|ref|XP_003620231.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355495246|gb|AES76449.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1489

 Score =  312 bits (800), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 296/895 (33%), Positives = 461/895 (51%), Gaps = 143/895 (15%)

Query: 11   LMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQ 69
            L++ GS+D + M+GI G+GG+GKTT+A  VY+ I H+F+ S F + VR+   + GL+ LQ
Sbjct: 202  LLNVGSNDTIHMVGIHGIGGIGKTTLALEVYNSIVHQFQCSCFFEKVRDFK-ESGLIYLQ 260

Query: 70   RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG 129
            + LLSQ++   +  I +V  G+ +L  RL +KKVLL++DDV   +QL+++AG+ EWFG G
Sbjct: 261  KILLSQIVGETNMEITSVRQGVSILQQRLHQKKVLLLLDDVDKDEQLKAIAGSSEWFGLG 320

Query: 130  SRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY---------------- 173
            SR+IIT+RD+ LL  HG++  Y+  GLN  +A  L   KA K Y                
Sbjct: 321  SRVIITTRDKRLLTYHGIERRYEVKGLNDADAFDLVGWKALKNYYSPSYKDVLLEQKQGR 380

Query: 174  ----------QPLQECVQLSA------RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLE 217
                      + L++ V+ S+      R + YA GLPLALEV+GS    +++++    L+
Sbjct: 381  ELNANELCRLKYLKKDVRFSSYANVLKRAVAYASGLPLALEVIGSHFFNKTIEQCNHVLD 440

Query: 218  RLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGI 276
            R E  P  +I   LQ+SFD LQ+ +K +FLDIAC  KG +   V   L    G      I
Sbjct: 441  RCERVPDKKIQTTLQVSFDALQDEDKFVFLDIACCLKGWNLTRVEEILHAHYGNIMKDHI 500

Query: 277  RVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTG 335
             VL+EK LI +  +  + +HDL++++G++IV+R+SPE+ GKR+RLW  E++  V  E+TG
Sbjct: 501  DVLVEKSLIKISVSGNVTLHDLIEDMGKEIVRRESPEDPGKRTRLWAYEDIKKVFKENTG 560

Query: 336  TELVEGIVLDNYHHENEVYL-----CASAKAFSKMTNLRLLKICN-LQLPNGLEYLSNRL 389
            T  ++ I     H + + ++      +  KAF KM NLR L     +      E++ N L
Sbjct: 561  TSTIKII-----HFQFDPWIEKKKDASDGKAFKKMKNLRTLIFSTPVCFSETSEHIPNSL 615

Query: 390  RLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGEL--WKGI--KHLDKLKVMILSHSENL 445
            R+L +      +                +SR   L  W G   K  + +KV+       L
Sbjct: 616  RVLEYSNRNRNYY---------------HSRGSNLFEWDGFLKKKFENMKVLNYDCDTLL 660

Query: 446  IRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLE 505
             RMPD +  PNLE+  ++ CT L  I  S+   +KL IL +  C +L ++P  +   SL 
Sbjct: 661  TRMPDISNLPNLEQFSIQDCTSLITIDESVGFLSKLKILRLIGCNNLQSVP-PLNSASLV 719

Query: 506  KLN------LKSLPTTISG-LKCLSTLDVSGDLKFREFPEIVEHMEHLSELH-LEGTAIR 557
            +LN      L+S P  +SG L  L  L V G  K R  P +V  +  L EL  L+ T++ 
Sbjct: 720  ELNLSHCHSLESFPPVVSGFLGELKILRVIGSSKIRLIPSLV--LPSLEELDLLDCTSLD 777

Query: 558  GLPLSIELLSGLVLLNLKNCRSLEILP------------------VTVSNLK--CLRSLK 597
                 +     L  ++ + C  L  +P                  V++S LK   L  L 
Sbjct: 778  SFSHMV-FGDKLKTMSFRGCYELRSIPPLKLDSLEKLYLSYCPNLVSISPLKLDSLEKLV 836

Query: 598  LSGCSKLKKFPEIVRS-MKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
            LS C KL+ FP +V   +  L  LF+ +  +++ +P+    L  LE L+LS C+NLV + 
Sbjct: 837  LSNCYKLESFPSVVDGFLGKLKTLFVRNCHNLRSIPTLK--LDSLEKLDLSHCRNLVSI- 893

Query: 656  SSIIALKSLKTLNLSGCFKLENVPET----LGQIESLEELDISGTAVPHSTSWYSYIPIN 711
             S + L SL+TL LS C+KLE+ P      LG++++L                       
Sbjct: 894  -SPLKLDSLETLGLSNCYKLESFPSVVDGFLGKLKTL----------------------- 929

Query: 712  LMRKSVALK-LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVSLP 769
             +R    L+ +P+L  L SL KL+L+ C  +   LP  +    SL++LYLS      S P
Sbjct: 930  FVRNCHNLRSIPTLR-LDSLEKLDLSHCRNLVNILPLKLD---SLEKLYLSSCYKLESFP 985

Query: 770  TSIT-HLSKLLNIELEDCKRLQSLPQLP-PNIRQVRVNGCASLVTL----LDALK 818
              +   L KL  + ++ C  L+S+P L   ++ ++ ++ C +LV++    LD+L+
Sbjct: 986  NVVDGFLGKLKTLFVKSCHNLRSIPALKLDSLEKLYLSYCRNLVSISPLKLDSLE 1040



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 214/480 (44%), Gaps = 94/480 (19%)

Query: 431  LDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL--LHNKLIILNMKD 488
            LD L+ + LSH  NL+ +       +LEKL L  C +L E  P+++     KL  L +K 
Sbjct: 945  LDSLEKLDLSHCRNLVNILPLK-LDSLEKLYLSSCYKL-ESFPNVVDGFLGKLKTLFVKS 1002

Query: 489  CTSLITLPGKILMKSLEKLNLKSLPTTIS----GLKCLSTLDVSGDLKFREFPEIVEHM- 543
            C +L ++P  + + SLEKL L      +S     L  L  L +S   K   FP +V+ + 
Sbjct: 1003 CHNLRSIPA-LKLDSLEKLYLSYCRNLVSISPLKLDSLEKLVISNCYKLESFPGVVDGLL 1061

Query: 544  EHLSELHLEGTA-IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
            + L  L ++    +R +P     L  L  L+L +C +L  +P     L  L +L LS C 
Sbjct: 1062 DKLKTLFVKNCHNLRSIP--ALKLDSLEKLDLSHCHNLVSIPSL--KLDSLETLNLSDCY 1117

Query: 603  KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
            KL+ FP +V           DG           LL KL+ LN+ +C  L  +P   ++L 
Sbjct: 1118 KLESFPSVV-----------DG-----------LLDKLKFLNIENCIMLRNIPR--LSLT 1153

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP-------HSTSWYSYIPIN---- 711
            SL+  NLS C++LE+ PE LG++ ++  L +  T +        + T   +Y P N    
Sbjct: 1154 SLEQFNLSCCYRLESFPEILGEMRNIPRLHLDETPIKELPFPFQNLTQPQTYYPCNCGHS 1213

Query: 712  -------LMRKSVALKLPSLSGLCSLRK-----LNLTDCNLMEGALPSDIGNLCSLKELY 759
                   LM K   L + +   +  ++      + +  C L +  L   +    ++KEL+
Sbjct: 1214 CFPNRASLMSKMAELSIQAEEKMSPIQSSHVKYICVKKCKLSDEYLSKTLMLFANVKELH 1273

Query: 760  LSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKL 819
            L+ + F  +P SI   + L  + L+DCK L+ +  +PP +R++    C    +       
Sbjct: 1274 LTNSKFTVIPKSIEKCNFLWKLVLDDCKELEEIKGIPPCLRELSAVNCKLTSS------- 1326

Query: 820  CKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEG 879
            CKS+                     +L + L    NTR      +P ++IPEWF +Q E 
Sbjct: 1327 CKSN---------------------LLNQKLHEAGNTR----FCLPRAKIPEWFDHQCEA 1361


>gi|315507091|gb|ADU33181.1| putative TIR-NBS-LRR-AAA+ATPase [Cucumis sativus]
          Length = 786

 Score =  312 bits (800), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 234/696 (33%), Positives = 368/696 (52%), Gaps = 77/696 (11%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKG-GLVSLQRQLLSQLL 77
            RM+G+ G+GG+GKTT+A+ +Y+ I+ +FE   FL N+RE S +  GLV LQ +LL ++L
Sbjct: 115 TRMVGLHGIGGMGKTTLAKTLYNRIADDFEGCCFLANIREASKQHEGLVRLQEKLLYEIL 174

Query: 78  KLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSR 137
                 + +++ GI+++ +RL  KK+LL++DD+   +QLQ LAG  +WFG GS++I+T+R
Sbjct: 175 MDDFIRVSDLYKGINIIRNRLCSKKILLILDDIDTSEQLQVLAGGYDWFGYGSKVIVTTR 234

Query: 138 DEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLAL 197
           +EHLL  HG +++     LNY EAL+LF+  AF+   P  E +QLS   + Y   LPLAL
Sbjct: 235 NEHLLDIHGFNKLRSVPELNYGEALELFSWHAFQCSSPPTEYLQLSKDAVNYCKNLPLAL 294

Query: 198 EVLGSFLSGRSVDEWRSTLERLEIEP-PSEILDILQISFDGLQELEKKIFLDIACFFKGN 256
           EVLGSFL      +++  LE   I     +I ++LQ+S+D L+   +++FL I+CFF G 
Sbjct: 295 EVLGSFLYSTDQSKFKGILEEFAISNLDKDIQNLLQVSYDELEGDVQEMFLFISCFFVGE 354

Query: 257 DRDYVTNFLEGCG-FHPVIGIRVLIEKCLITVHN-NTLWMHDLLQELGQQIVQRQ---SP 311
           D+  V   L+ CG      GI+ L+   L+T++  N + MHDL+Q+LG  I + +   SP
Sbjct: 355 DKTMVETMLKSCGCLCWEKGIQKLMNLSLLTINQWNKVEMHDLIQQLGHTIARSKTSISP 414

Query: 312 EELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLL 371
            E     +L   ++  HVL        V+ I L+ +    ++ +  S  AF K+ NL +L
Sbjct: 415 SE----KKLLVGDDAMHVLDGIKDARAVKAIKLE-FPKPTKLDIIDST-AFRKVKNLVVL 468

Query: 372 KICNLQLP--NGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIK 429
           K+ N+  P  + L++L N LR + W  +P    PS+  M+  I++ + +S I    +   
Sbjct: 469 KVKNVISPKISTLDFLPNSLRWMSWSEFPFSSFPSSYSMENLIQLKLPHSAIQHFGRAFM 528

Query: 430 HLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKD- 488
           H ++LK + LS+S  L  +PD + A NLE L L GC  L ++H S+    KLI L++   
Sbjct: 529 HCERLKQLDLSNSFFLEEIPDLSAAINLENLSLSGCISLVKVHKSVGSLPKLIDLSLSSH 588

Query: 489 CTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHME-HLS 547
                  P  + +KSL++ +     T + G                 +P+  + M+  L 
Sbjct: 589 VYGFKQFPSPLRLKSLKRFSTDHC-TILQG-----------------YPQFSQEMKSSLE 630

Query: 548 ELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKF 607
           +L  + ++I  L  +I  L+ L  L + +C+ L  LP T+ +L  L S+++S  S L  F
Sbjct: 631 DLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQ-SDLSTF 689

Query: 608 PEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL-----------------------LN 644
           P                 S    PSS+ LLT+L L                       LN
Sbjct: 690 P-----------------SSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELN 732

Query: 645 LSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
           LS+  N   LPS I+  KSL+ L    C  LE +P+
Sbjct: 733 LSN-NNFSILPSCIVNFKSLRFLETFDCKFLEEIPK 767



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 124/283 (43%), Gaps = 49/283 (17%)

Query: 543 MEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
           ME+L +L L  +AI+    +      L  L+L N   LE +P  +S    L +L LSGC 
Sbjct: 507 MENLIQLKLPHSAIQHFGRAFMHCERLKQLDLSNSFFLEEIP-DLSAAINLENLSLSGCI 565

Query: 603 KLKKFPEIVRSMKDLSELFLDG--TSIKEVPSSIELLTKLELLNLSDC------------ 648
            L K  + V S+  L +L L       K+ PS + L   L+  +   C            
Sbjct: 566 SLVKVHKSVGSLPKLIDLSLSSHVYGFKQFPSPLRL-KSLKRFSTDHCTILQGYPQFSQE 624

Query: 649 ------------KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
                        ++ +L S+I  L SLK L +  C KL  +P T+  +  L  +++S +
Sbjct: 625 MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS 684

Query: 697 AVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEG---ALPSDIGNLC 753
            +    S YS              LP L+ L  L +  +T+ + +E    A PS      
Sbjct: 685 DLSTFPSSYS----------CPSSLPLLTRL-HLYENKITNLDFLETIAHAAPS------ 727

Query: 754 SLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP 796
            L+EL LS N+F  LP+ I +   L  +E  DCK L+ +P++P
Sbjct: 728 -LRELNLSNNNFSILPSCIVNFKSLRFLETFDCKFLEEIPKIP 769


>gi|224114307|ref|XP_002332394.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832717|gb|EEE71194.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 516

 Score =  312 bits (800), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 176/335 (52%), Positives = 234/335 (69%), Gaps = 1/335 (0%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-I 59
           +DSR E L   +   + +   IGICGMGG+GKTT+ARV+YD I   FE S FL NVRE  
Sbjct: 181 IDSRLEVLNGYIGEETGEAIFIGICGMGGIGKTTVARVLYDRIRRRFEGSCFLANVREAF 240

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           + K G  SLQ++LLS +L   D +I +   GI+M+  +LQR K+L+V+DDV D KQL+ L
Sbjct: 241 AEKDGPRSLQKKLLSDILMERDINICDSSTGIEMIKQKLQRIKILVVLDDVNDRKQLEYL 300

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           A    WFG GSRIIITSRD ++L  +   ++Y+   LN D+AL LF+ KAFK  QP +  
Sbjct: 301 AKEPGWFGPGSRIIITSRDTNVLIGNDDTKIYEAEKLNDDDALMLFSQKAFKNDQPAEGF 360

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V+LS +++ YA GLPLALEV+GSFL  RS+ EWR  + R+   P  +I+D+L++SFDGL 
Sbjct: 361 VELSKQVVDYANGLPLALEVIGSFLYERSIPEWRGAINRMNEIPDCKIIDVLRVSFDGLH 420

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           E +KKIFLDIACF KG  +D +T  LE  GFH  IGI VLIE+ LI+V  + +WMHDLLQ
Sbjct: 421 ESDKKIFLDIACFLKGFKKDRITRILESRGFHAGIGIPVLIERSLISVSRDQVWMHDLLQ 480

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTEST 334
            +G++IV+ +SPEE G+RSRLW  E+VC  L ++T
Sbjct: 481 IMGKEIVRCESPEEPGRRSRLWTYEDVCLALMDNT 515


>gi|15238668|ref|NP_197290.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332005098|gb|AED92481.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1197

 Score =  312 bits (799), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 262/869 (30%), Positives = 418/869 (48%), Gaps = 111/869 (12%)

Query: 6    EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
            EKLRF  D  +   R IG+ GM G+GKTT+A ++Y+  +  F     + ++ E S + GL
Sbjct: 216  EKLRFGSDETT---RTIGVVGMPGIGKTTLATMLYEKWNDRFLRHVLIRDIHEASEEDGL 272

Query: 66   VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
              L  + L  LLK+ + +I +V    +    +L   KVL+++D+V +  Q+ +L G R W
Sbjct: 273  NYLATKFLQGLLKVENANIESVQAAHEAYKDQLLETKVLVILDNVSNKDQVDALLGERNW 332

Query: 126  FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ-----PLQ-EC 179
               GS+I+IT+ D+ L+    V++ Y+   L+  +A++ F   AF   +     P Q   
Sbjct: 333  IKKGSKILITTSDKSLMIQSLVNDTYEVPPLSDKDAIKHFIRYAFDGNEGAAPGPGQGNF 392

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWR---STLERLEIEPPSE-ILDILQISF 235
             +LS   + Y  G PLAL++LG  L G+    W    + L++    PP + I  +LQ  +
Sbjct: 393  PKLSKDFVHYTKGNPLALQMLGKELLGKDESHWGLKLNALDQHHNSPPGQSICKMLQRVW 452

Query: 236  DG----LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT 291
            +G    L + EK   LDIAC F+  D +YV + L+  G  P   +  L+ K +I ++   
Sbjct: 453  EGSYKALSQKEKDALLDIAC-FRSQDENYVASLLDSDG--PSNILEDLVNKFMINIYAGK 509

Query: 292  LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
            + MHD L  L +++ +  +  +   R RLW    +  VL ++ G   +  I LD      
Sbjct: 510  VDMHDTLYMLSKELGREATATDRKGRHRLWHHHTIIAVLDKNKGGSNIRSIFLDLSDITR 569

Query: 352  EVYLCASAKAFSKMTNLRLLKI------------CNLQLPNGLEYLSNRLRLLGWRGYPL 399
            +   C    AF+ M +LR LKI              L  P GL    N +R L W  +PL
Sbjct: 570  K--WCFYRHAFAMMRDLRYLKIYSTHCPQECESDIKLNFPEGLLLPLNEVRYLHWLKFPL 627

Query: 400  KFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEK 459
            K +P +      +++ + YS I  +W+  K   KLK + L+HS+ L  +     A NL++
Sbjct: 628  KEVPQDFNPGNLVDLKLPYSEIERVWEDNKDAPKLKWVNLNHSKKLNTLAGLGKAQNLQE 687

Query: 460  LILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGL 519
            L LEGCT L E+H  +     L+ LN++ CTSL         KSL ++ L SL T I   
Sbjct: 688  LNLEGCTALKEMHVDMENMKFLVFLNLRGCTSL---------KSLPEIQLISLKTLI--- 735

Query: 520  KCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRS 579
                   +SG  KF+ F  I + +E    L+L+GTAI+ LP  I  L  LV+LN+K C+ 
Sbjct: 736  -------LSGCSKFKTFQVISDKLE---ALYLDGTAIKELPCDIGRLQRLVMLNMKGCKK 785

Query: 580  LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIEL--- 636
            L+ LP ++  LK L  L LSGCSKL +FPE   +M  L  L LD T+IK++P  + +   
Sbjct: 786  LKRLPDSLGQLKALEELILSGCSKLNEFPETWGNMSRLEILLLDETAIKDMPKILSVRRL 845

Query: 637  -----------------LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVP 679
                              ++L+ L+L  CKNL  +P       +L+ LN+ GC  L+ V 
Sbjct: 846  CLNKNEKISRLPDLLNKFSQLQWLHLKYCKNLTHVPQ---LPPNLQYLNVHGCSSLKTVA 902

Query: 680  ETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCN 739
            + L          +    + H  S + +   N + ++   ++     + + RK     C+
Sbjct: 903  KPL----------VCSIPMKHVNSSFIFTNCNELEQAAKEEIV----VYAERK-----CH 943

Query: 740  LMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
            L+  AL       C  + L+ +      +P+  +H +    +E E          LPP+ 
Sbjct: 944  LLASAL-KRCDESCVPEILFCTSFPGCEMPSWFSHDAIGSMVEFE----------LPPHW 992

Query: 800  RQVRVNGCASLVTLLDALKLCKSDSTMIA 828
               R++G A  V +  + K CKS + +I 
Sbjct: 993  NHNRLSGIALCVVV--SFKNCKSHANLIV 1019



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/377 (32%), Positives = 181/377 (48%), Gaps = 70/377 (18%)

Query: 544  EHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
            ++L EL+LEG TA++ + + +E +  LV LNL+ C SL+ LP     L  L++L LSGCS
Sbjct: 683  QNLQELNLEGCTALKEMHVDMENMKFLVFLNLRGCTSLKSLPEI--QLISLKTLILSGCS 740

Query: 603  KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
            K K F  I      L  L+LDGT+IKE+P  I  L +L +LN+  CK L RLP S+  LK
Sbjct: 741  KFKTFQVISDK---LEALYLDGTAIKELPCDIGRLQRLVMLNMKGCKKLKRLPDSLGQLK 797

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
            +L+ L LSGC KL   PET G +  LE L +  TA+                        
Sbjct: 798  ALEELILSGCSKLNEFPETWGNMSRLEILLLDETAI------------------------ 833

Query: 723  SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS-LPTSITHLSKLLNI 781
                                     D+  + S++ L L+KN  +S LP  +   S+L  +
Sbjct: 834  ------------------------KDMPKILSVRRLCLNKNEKISRLPDLLNKFSQLQWL 869

Query: 782  ELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDAL------KLCKSDSTMIACLDSLKL 835
             L+ CK L  +PQLPPN++ + V+GC+SL T+   L      K   S      C +  + 
Sbjct: 870  HLKYCKNLTHVPQLPPNLQYLNVHGCSSLKTVAKPLVCSIPMKHVNSSFIFTNCNELEQA 929

Query: 836  LGNKSLAFSMLREYLEAVSNTRQHLSVV--------VPGSEIPEWFMYQNEGSSITVTRP 887
               + + ++  + +L A +  R   S V         PG E+P WF +   GS +    P
Sbjct: 930  AKEEIVVYAERKCHLLASALKRCDESCVPEILFCTSFPGCEMPSWFSHDAIGSMVEFELP 989

Query: 888  SNLYNKKKLVGYAICCV 904
             + +N  +L G A+C V
Sbjct: 990  PH-WNHNRLSGIALCVV 1005


>gi|8843883|dbj|BAA97409.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1018

 Score =  312 bits (799), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 235/698 (33%), Positives = 361/698 (51%), Gaps = 67/698 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYD-LISHEFEASGFLDN---- 55
           M++  ++L  L+   S +V+MIGI G  G+GKTTIAR ++D  +S  F+   F+ N    
Sbjct: 146 MEAHLKRLNSLLCLESDEVKMIGIWGPAGIGKTTIARALFDDRLSSSFQHKCFMGNLKGS 205

Query: 56  VREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQ 115
           ++ ++     + LQ+QLLS++ K  +  I +    +  +  RL  ++VL+++DDV D+KQ
Sbjct: 206 IKGVADHDSKLRLQKQLLSKIFKEENMKIHH----LGAIRERLHDQRVLIILDDVDDLKQ 261

Query: 116 LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP 175
           L+ LA    WFGSGSRII T+ D+ +LK HG+  +Y+    +  +AL++  + AFK    
Sbjct: 262 LEVLAKEISWFGSGSRIIGTTEDKKILKAHGIHNIYRVDFPSKKDALEILCLSAFKQSSI 321

Query: 176 LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
                +L+ ++ +    LPL L V+G+ L G    EW   L R+E     +I DIL+I +
Sbjct: 322 PDGFEELANKVAKLCSNLPLGLCVVGASLRGEGNQEWERLLSRIESSLDRDIDDILRIGY 381

Query: 236 DGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH----NNT 291
           D L   +K +FL IACFF     D VT  L         G   L ++ LI          
Sbjct: 382 DRLLTNDKSLFLHIACFFNYAKVDNVTALLADSNLDVGNGFNTLADRSLINFSCILPYGR 441

Query: 292 LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
           + MH LLQ+LG+QIV  QS E  GKR  + + EE+  VLT  TGT  V GI  D     N
Sbjct: 442 IEMHHLLQQLGRQIVLEQSKEP-GKREFIIEPEEIRDVLTNETGTGSVIGISFDT---SN 497

Query: 352 EVYLCASAKAFSKMTNLRLLKI-------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
              +  S  AF  M NLR L+I         LQ+P  ++Y+  RLRLL W  YP K LP 
Sbjct: 498 IGEVSVSKDAFEGMRNLRFLRIYRLLGGEVTLQIPEDMDYIP-RLRLLYWDRYPRKSLPR 556

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
             + ++ +E++M  S +  LW GI+ L  LK++ L+ S  L  +P+ + A NLE+L LE 
Sbjct: 557 RFKPERLVELHMPRSNLELLWGGIEPLPNLKIINLNRSYRLKEIPNLSKATNLERLTLES 616

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISG 518
           C  L E+  S+   +KL IL++K C+ L  +P  I + SLE+L+      L++ P   S 
Sbjct: 617 CLSLVELPSSISNLHKLEILDVKFCSMLQVIPTNINLASLERLDVSGCSRLRTFPDISSN 676

Query: 519 LKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCR 578
           +K L    + G++K  + P  V     L +LH+   +++ L   + +   + LL+L+   
Sbjct: 677 IKTL----IFGNIKIEDVPPSVGCWSRLDQLHISSRSLKRL---MHVPPCITLLSLRGS- 728

Query: 579 SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLT 638
            +E +   V  L  L  L +  C KLK                    SI  +PSS     
Sbjct: 729 GIERITDCVIGLTRLHWLNVDSCRKLK--------------------SILGLPSS----- 763

Query: 639 KLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
            L++L+ +DC +L R+  S      + TL+ + C KL+
Sbjct: 764 -LKVLDANDCVSLKRVRFSF--HNPMHTLDFNNCLKLD 798



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 158/357 (44%), Gaps = 57/357 (15%)

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
           + PE ++++  L  L+ +    + LP   +    LV L++    +LE+L   +  L  L+
Sbjct: 530 QIPEDMDYIPRLRLLYWDRYPRKSLPRRFKP-ERLVELHMPRS-NLELLWGGIEPLPNLK 587

Query: 595 SLKLSGCSKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNLVR 653
            + L+   +LK+ P + ++  +L  L L+   S+ E+PSSI  L KLE+L++  C  L  
Sbjct: 588 IINLNRSYRLKEIPNLSKAT-NLERLTLESCLSLVELPSSISNLHKLEILDVKFCSMLQV 646

Query: 654 LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTS-WYSYIPINL 712
           +P++I  L SL+ L++SGC +L   P+    I++L   +I    VP S   W     +++
Sbjct: 647 IPTNI-NLASLERLDVSGCSRLRTFPDISSNIKTLIFGNIKIEDVPPSVGCWSRLDQLHI 705

Query: 713 MRKSVA--LKLPSLSGLCSLRKLNL---TDCNLMEGALPSDIGNLCSLKELYLSKNSFVS 767
             +S+   + +P    L SLR   +   TDC                             
Sbjct: 706 SSRSLKRLMHVPPCITLLSLRGSGIERITDC----------------------------- 736

Query: 768 LPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMI 827
               +  L++L  + ++ C++L+S+  LP +++ +  N C SL  +  +           
Sbjct: 737 ----VIGLTRLHWLNVDSCRKLKSILGLPSSLKVLDANDCVSLKRVRFSFHNPMHTLDFN 792

Query: 828 ACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
            CL  L     + +    +  Y            + +P  +IPE F ++  G SIT+
Sbjct: 793 NCL-KLDEEAKRGIIQRSVSRY------------ICLPCKKIPEEFTHKATGKSITI 836


>gi|10177889|dbj|BAB11221.1| disease resistance protein [Arabidopsis thaliana]
          Length = 1188

 Score =  312 bits (799), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 262/868 (30%), Positives = 418/868 (48%), Gaps = 111/868 (12%)

Query: 6    EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
            EKLRF  D  +   R IG+ GM G+GKTT+A ++Y+  +  F     + ++ E S + GL
Sbjct: 219  EKLRFGSDETT---RTIGVVGMPGIGKTTLATMLYEKWNDRFLRHVLIRDIHEASEEDGL 275

Query: 66   VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
              L  + L  LLK+ + +I +V    +    +L   KVL+++D+V +  Q+ +L G R W
Sbjct: 276  NYLATKFLQGLLKVENANIESVQAAHEAYKDQLLETKVLVILDNVSNKDQVDALLGERNW 335

Query: 126  FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ-----PLQ-EC 179
               GS+I+IT+ D+ L+    V++ Y+   L+  +A++ F   AF   +     P Q   
Sbjct: 336  IKKGSKILITTSDKSLMIQSLVNDTYEVPPLSDKDAIKHFIRYAFDGNEGAAPGPGQGNF 395

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWR---STLERLEIEPPSE-ILDILQISF 235
             +LS   + Y  G PLAL++LG  L G+    W    + L++    PP + I  +LQ  +
Sbjct: 396  PKLSKDFVHYTKGNPLALQMLGKELLGKDESHWGLKLNALDQHHNSPPGQSICKMLQRVW 455

Query: 236  DG----LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT 291
            +G    L + EK   LDIAC F+  D +YV + L+  G  P   +  L+ K +I ++   
Sbjct: 456  EGSYKALSQKEKDALLDIAC-FRSQDENYVASLLDSDG--PSNILEDLVNKFMINIYAGK 512

Query: 292  LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
            + MHD L  L +++ +  +  +   R RLW    +  VL ++ G   +  I LD      
Sbjct: 513  VDMHDTLYMLSKELGREATATDRKGRHRLWHHHTIIAVLDKNKGGSNIRSIFLDLSDITR 572

Query: 352  EVYLCASAKAFSKMTNLRLLKI------------CNLQLPNGLEYLSNRLRLLGWRGYPL 399
            +   C    AF+ M +LR LKI              L  P GL    N +R L W  +PL
Sbjct: 573  K--WCFYRHAFAMMRDLRYLKIYSTHCPQECESDIKLNFPEGLLLPLNEVRYLHWLKFPL 630

Query: 400  KFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEK 459
            K +P +      +++ + YS I  +W+  K   KLK + L+HS+ L  +     A NL++
Sbjct: 631  KEVPQDFNPGNLVDLKLPYSEIERVWEDNKDAPKLKWVNLNHSKKLNTLAGLGKAQNLQE 690

Query: 460  LILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGL 519
            L LEGCT L E+H  +     L+ LN++ CTSL         KSL ++ L SL T I   
Sbjct: 691  LNLEGCTALKEMHVDMENMKFLVFLNLRGCTSL---------KSLPEIQLISLKTLI--- 738

Query: 520  KCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRS 579
                   +SG  KF+ F  I + +E    L+L+GTAI+ LP  I  L  LV+LN+K C+ 
Sbjct: 739  -------LSGCSKFKTFQVISDKLE---ALYLDGTAIKELPCDIGRLQRLVMLNMKGCKK 788

Query: 580  LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIEL--- 636
            L+ LP ++  LK L  L LSGCSKL +FPE   +M  L  L LD T+IK++P  + +   
Sbjct: 789  LKRLPDSLGQLKALEELILSGCSKLNEFPETWGNMSRLEILLLDETAIKDMPKILSVRRL 848

Query: 637  -----------------LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVP 679
                              ++L+ L+L  CKNL  +P       +L+ LN+ GC  L+ V 
Sbjct: 849  CLNKNEKISRLPDLLNKFSQLQWLHLKYCKNLTHVPQ---LPPNLQYLNVHGCSSLKTVA 905

Query: 680  ETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCN 739
            + L          +    + H  S + +   N + ++   ++     + + RK     C+
Sbjct: 906  KPL----------VCSIPMKHVNSSFIFTNCNELEQAAKEEIV----VYAERK-----CH 946

Query: 740  LMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
            L+  AL       C  + L+ +      +P+  +H +    +E E          LPP+ 
Sbjct: 947  LLASAL-KRCDESCVPEILFCTSFPGCEMPSWFSHDAIGSMVEFE----------LPPHW 995

Query: 800  RQVRVNGCASLVTLLDALKLCKSDSTMI 827
               R++G A  V +  + K CKS + +I
Sbjct: 996  NHNRLSGIALCVVV--SFKNCKSHANLI 1021



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/377 (32%), Positives = 181/377 (48%), Gaps = 70/377 (18%)

Query: 544  EHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
            ++L EL+LEG TA++ + + +E +  LV LNL+ C SL+ LP     L  L++L LSGCS
Sbjct: 686  QNLQELNLEGCTALKEMHVDMENMKFLVFLNLRGCTSLKSLPEI--QLISLKTLILSGCS 743

Query: 603  KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
            K K F  I      L  L+LDGT+IKE+P  I  L +L +LN+  CK L RLP S+  LK
Sbjct: 744  KFKTFQVI---SDKLEALYLDGTAIKELPCDIGRLQRLVMLNMKGCKKLKRLPDSLGQLK 800

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
            +L+ L LSGC KL   PET G +  LE L +  TA+                        
Sbjct: 801  ALEELILSGCSKLNEFPETWGNMSRLEILLLDETAI------------------------ 836

Query: 723  SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS-LPTSITHLSKLLNI 781
                                     D+  + S++ L L+KN  +S LP  +   S+L  +
Sbjct: 837  ------------------------KDMPKILSVRRLCLNKNEKISRLPDLLNKFSQLQWL 872

Query: 782  ELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDAL------KLCKSDSTMIACLDSLKL 835
             L+ CK L  +PQLPPN++ + V+GC+SL T+   L      K   S      C +  + 
Sbjct: 873  HLKYCKNLTHVPQLPPNLQYLNVHGCSSLKTVAKPLVCSIPMKHVNSSFIFTNCNELEQA 932

Query: 836  LGNKSLAFSMLREYLEAVSNTRQHLSVV--------VPGSEIPEWFMYQNEGSSITVTRP 887
               + + ++  + +L A +  R   S V         PG E+P WF +   GS +    P
Sbjct: 933  AKEEIVVYAERKCHLLASALKRCDESCVPEILFCTSFPGCEMPSWFSHDAIGSMVEFELP 992

Query: 888  SNLYNKKKLVGYAICCV 904
             + +N  +L G A+C V
Sbjct: 993  PH-WNHNRLSGIALCVV 1008


>gi|357513699|ref|XP_003627138.1| Resistance protein [Medicago truncatula]
 gi|355521160|gb|AET01614.1| Resistance protein [Medicago truncatula]
          Length = 1050

 Score =  312 bits (799), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 300/1026 (29%), Positives = 471/1026 (45%), Gaps = 183/1026 (17%)

Query: 32   KTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGI 91
            KTTIAR ++     E++++ FL+NV E   K GL+ ++  LL +LL   +  I     G 
Sbjct: 67   KTTIARQMFAKHFAEYDSACFLENVSEDVVKLGLIHVRNNLLGELL---NRQIKATEHGS 123

Query: 92   DMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVY 151
              +  RL  +KV +V+DDV     L+ L  +    G  SR+IIT+RD+H+L    VDE+Y
Sbjct: 124  ASIWRRLSGRKVYIVLDDVNTALILEYLCQDLYDLGPHSRLIITTRDKHILNG-TVDEIY 182

Query: 152  KPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDE 211
            +     + E+L+LF++ AFK   P++   + S R + YAGG+PLAL+VLGSF   R+++ 
Sbjct: 183  EVKKWKFKESLKLFSLGAFKQSFPMEGYKRFSERAVEYAGGVPLALKVLGSFFYSRNLEF 242

Query: 212  WRSTLERLEIEPPS--EILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCG 269
            W S L  LE +  S   I ++L++S++ L+E  +K+FL+IA FFK  ++D+V   L   G
Sbjct: 243  WESELNHLEKKGESLDGIQEVLKVSYNRLKERYQKMFLNIAFFFKDENKDFVIRILSASG 302

Query: 270  FHPVIGIRVLIEKCLITVHN-NTLWMHDLLQELGQQIVQR-QSPEELGKRSRLWKEEEVC 327
            F+   GI++L EK L+T+ + N + MHDLLQ++   IV   + PE+L   SRL   ++V 
Sbjct: 303  FNASSGIQILEEKALVTISSSNRIQMHDLLQKMAFNIVHNIKGPEKL---SRLRDSKKVS 359

Query: 328  HVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI---------CNLQL 378
             +L     T  VEGI+ D      EV L   A+ F +MT L  L+            L  
Sbjct: 360  SILKSKKDTSAVEGIIFD---LSEEVDLHIQAETFKEMTKLWFLRFYVPLGKKRSTTLHH 416

Query: 379  PNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMI 438
              G+  +S++LR L W  YP K LP     ++ +EI++  S +  +W G           
Sbjct: 417  DQGIMSISDKLRYLEWSEYPFKSLPHAFCANQLVEIHLPRSNVEHIWDG----------- 465

Query: 439  LSHSENLIRMPDFTGAPNLEKLILEG--CTRLYEIHPSLLLHNKLIILNMKDCTSLITLP 496
               ++  + + DF+      KL+     C  +++   SL        +N+ +C  LI LP
Sbjct: 466  ---NQVCVSVCDFSLKFKWGKLLFNSSFCLDMFQELVSLE------TINLSECKKLIKLP 516

Query: 497  GKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAI 556
               L ++++   LK L   +SG + L  ++          P I                 
Sbjct: 517  D--LSRAIK---LKCL--YLSGCQSLCAIE----------PHIFSK-------------- 545

Query: 557  RGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKD 616
                        LV + L  C  L+ L  +  +L+ L  + ++GCS+LK+F     S++ 
Sbjct: 546  ----------DTLVTVLLDRCEKLQSLK-SEKHLRYLEKINVNGCSQLKEFSVFSDSIES 594

Query: 617  LSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
            L    L  T IK + SSI  + KL  LNL   + L  LP+ +  L+SL  L L  C    
Sbjct: 595  LD---LSNTGIKILQSSIGRMRKLVWLNLEGLR-LKNLPNELSNLRSLTELWLCNC---- 646

Query: 677  NVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLT 736
            N+  T  ++ES+                                     GL SL +L L 
Sbjct: 647  NIVTT-SKLESI-----------------------------------FDGLESLTRLYLK 670

Query: 737  DCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP 796
            DC  +   +P++I +L SL EL L  +S   LP +I ++ +L  I L++C +L+ LP+LP
Sbjct: 671  DCRYL-IEIPANISSLSSLYELRLDGSSVKFLPANIKYVLRLEIISLDNCTKLRILPELP 729

Query: 797  PNIRQVRVNGCASLVTLLD---------------ALKLCKSDSTMIACLDSLKLLGN--- 838
            P+I++     C SLVT+                 + K C S       LD   L GN   
Sbjct: 730  PHIKEFHAENCTSLVTISTLKTFSGSMNGKDIYISFKNCTS-------LDGPSLHGNLED 782

Query: 839  -----KSLAFS--MLREY-LEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNL 890
                 KS AF   ++R+Y L+  +         +PG  +P  F YQ + S I +      
Sbjct: 783  AISTMKSAAFHNILVRKYSLQTRNYNYNRAEFCLPGRRVPRQFQYQTKESCINIELSK-- 840

Query: 891  YNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQA----- 945
                  + Y++  +F V+      N F    T Q  C+       +G+  K+        
Sbjct: 841  ------LSYSLGFIFSVIIAPPPINTFNDGLTIQCQCY-SKDRKMVGYASKWHHKNTTRL 893

Query: 946  GSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKM--CGLHPVYM 1003
             SDH+++ Y       DI    +     FE +   VS E      + V M  CG+ P+Y 
Sbjct: 894  NSDHIFVWY--DPYISDIIWESDETNVTFEFSVSTVSAEGVYNNFMTVTMKECGICPIYF 951

Query: 1004 DEVEEL 1009
             E + L
Sbjct: 952  SEFQML 957


>gi|297791251|ref|XP_002863510.1| hypothetical protein ARALYDRAFT_494460 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309345|gb|EFH39769.1| hypothetical protein ARALYDRAFT_494460 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1188

 Score =  311 bits (798), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 253/730 (34%), Positives = 368/730 (50%), Gaps = 98/730 (13%)

Query: 2   DSRCEKL--RFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           D R ++L  +  ++   ++ R++G+ GM G+GKT +AR ++  +  +     F++  RE 
Sbjct: 222 DQRLKQLEVKLNVECNDNETRIVGVVGMPGIGKTYLARKLFVKLKKKINHCVFIEFEREK 281

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S + G   L+++L+  LL + + +  N    + +    L  KKV +V+D+V + K     
Sbjct: 282 SEEQGSEWLEKRLVESLLDIKNCTDTN---ALVVWKDSLINKKVTIVLDNVSEKKH---- 334

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHG-VDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
                W   GS+I+IT+RD+ L  T G V ++Y+  GLN  + L+LF  +A  T      
Sbjct: 335 -----WIKKGSKIVITTRDKSL--TEGLVSDLYEVPGLNERDGLELFRAQACCTLD--GN 385

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
            ++LS + + YAGG PLALE  G  L G+ V  W + L  L       I + L+ S+D L
Sbjct: 386 FMELSRKFVDYAGGNPLALEQFGKELRGKDVVHWETRLGTLAQCSNPTIREKLRSSYDEL 445

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIG---IRVLIEKCLITVHNNTLWMH 295
            EL+K  FLDIA FF+  D  YV + L+ C           R L +K LI V +  + MH
Sbjct: 446 NELQKDAFLDIAYFFRSQDESYVRSLLDSCDPESAESGHEFRDLADKFLIGVCDGRVEMH 505

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLW----KEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
           DLL  + +++V     E    +SRL      E     +  +  G + V GIVLD     +
Sbjct: 506 DLLFTMAKELV-----EATADKSRLLLSNCAELRNKELSLDQQGRDKVRGIVLD-MSKMD 559

Query: 352 EVYLCASAKAFSKMTNLRLLKI------------CNLQLPNGLEY-LSNRLRLLGWRGYP 398
           E  L    + F  M++LR LK+            C L LP+GLE+   N +R L W  +P
Sbjct: 560 ETPL--KREVFVGMSSLRYLKVYNSLCPPHSETECKLNLPDGLEFPKDNAVRYLHWVKFP 617

Query: 399 LKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLE 458
              LPS+   +  I++ + YS I  +W   K    LK + LSHS NL  +     APNL 
Sbjct: 618 GTELPSDFDPNNLIDLKLPYSNIITVWICTKVAPNLKWVDLSHSSNLNSLMGLLKAPNLL 677

Query: 459 KLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISG 518
           +L LEGCT L E+   +     L+ LN++ CTSL++LP KI M SL+ L        +SG
Sbjct: 678 RLNLEGCTSLKELPDEMKEMTNLVFLNLRGCTSLLSLP-KITMDSLKTL-------ILSG 729

Query: 519 LKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCR 578
              L T DV                EHL  L+L GT+I GLP +I  L  L+LLNLK+C+
Sbjct: 730 CSKLQTFDVIS--------------EHLESLYLNGTSINGLPPAIGNLHRLILLNLKDCK 775

Query: 579 SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSI---E 635
           +L  LP  +  LK L+ LKLS CS+LK FP++ + ++ L  L LDGTSI E+P +I    
Sbjct: 776 NLATLPDCLWELKSLQELKLSRCSELKMFPDVKKKVESLRVLLLDGTSIAEMPGNIFDFS 835

Query: 636 LLTK---------------------LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
           LL +                     L+ L L  CKNL  LP   I   +L+ LN  GC  
Sbjct: 836 LLRRLCLSRNDNIRTLRFDMGQMFHLKWLELKWCKNLTSLP---ILPPNLQCLNAHGCTS 892

Query: 675 LENV--PETL 682
           L  V  P+TL
Sbjct: 893 LRTVASPQTL 902



 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 202/432 (46%), Gaps = 70/432 (16%)

Query: 545  HLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILP-VTVSNLKCLRSLKLSGCS 602
            +L  L+LEG T+++ LP  ++ ++ LV LNL+ C SL  LP +T+ +LK   +L LSGCS
Sbjct: 675  NLLRLNLEGCTSLKELPDEMKEMTNLVFLNLRGCTSLLSLPKITMDSLK---TLILSGCS 731

Query: 603  KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
            KL+ F  I    + L  L+L+GTSI  +P +I  L +L LLNL DCKNL  LP  +  LK
Sbjct: 732  KLQTFDVI---SEHLESLYLNGTSINGLPPAIGNLHRLILLNLKDCKNLATLPDCLWELK 788

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
            SL+ L LS C +L+  P+   ++ESL  L + GT++                        
Sbjct: 789  SLQELKLSRCSELKMFPDVKKKVESLRVLLLDGTSI------------------------ 824

Query: 723  SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFV-SLPTSITHLSKLLNI 781
                                  +P +I +   L+ L LS+N  + +L   +  +  L  +
Sbjct: 825  --------------------AEMPGNIFDFSLLRRLCLSRNDNIRTLRFDMGQMFHLKWL 864

Query: 782  ELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKL------CKSDSTMIACLDSLKL 835
            EL+ CK L SLP LPPN++ +  +GC SL T+     L        S      C +  ++
Sbjct: 865  ELKWCKNLTSLPILPPNLQCLNAHGCTSLRTVASPQTLPTPTEQIHSTFIFTNCHELEQV 924

Query: 836  LGNKSLAFSMLREYLEAVSNT------RQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSN 889
              N  +++   +  L +          +  +    PG EIP WF +Q+ GS +T+  P +
Sbjct: 925  SKNAIISYVQKKSKLMSADRYNPDFVFKSLIGTCFPGCEIPAWFNHQSLGSVLTLELPQD 984

Query: 890  LYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQL-NCHIGHGIYGIGFRDKFGQ---- 944
                 K++G A+C V    +    NN      T +  N  +    + +G   + G+    
Sbjct: 985  WNAAGKIIGIALCVVVSFKEYRDQNNSLQVKCTWEFTNVSLSPESFMVGGWSEPGEETHT 1044

Query: 945  AGSDHLWLLYLS 956
              SDH ++ Y S
Sbjct: 1045 VESDHTFISYTS 1056


>gi|357468511|ref|XP_003604540.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505595|gb|AES86737.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1100

 Score =  311 bits (798), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 213/573 (37%), Positives = 321/573 (56%), Gaps = 36/573 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D     L  L+   S  VR+IGI GM G+GKTTIA  +++    E++   FL  V E  
Sbjct: 267 IDKSIAHLNSLLKKESQKVRVIGIWGMPGIGKTTIAEEIFNQNRSEYDGCCFLAKVSEKL 326

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRK----KVLLVIDDVVDVKQL 116
              G+ SL+  L +++L   D  I    D  + L S ++R+    KVL+++DDV D  QL
Sbjct: 327 KLHGIESLKETLFTKILA-EDVKI----DTPNRLSSDIERRIGRMKVLIILDDVKDEDQL 381

Query: 117 QSLAGNREWFGSGSRIIITSRDEHLLKTHGVDE--VYKPHGLNYDEALQLFNMKAFKTYQ 174
           + L    +WF S SRII+T+RD+ +L  + VD+   Y+   L+  +AL LFN+ AFK   
Sbjct: 382 EMLFETLDWFQSDSRIILTARDKQVLFDNEVDDDDRYEVGVLDSSDALALFNLNAFKQSH 441

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
              E  ++S R++ YA G PL L+VL   L G++ + W S L++L+  P  ++ D++++S
Sbjct: 442 LETEFDEISKRVVNYAKGNPLVLKVLAHMLRGKNKEVWESQLDKLKRLPVKKVHDVVKLS 501

Query: 235 FDGLQELEKKIFLDIACFFKGND--RDYVTNFLEGC-GFHPV-IGIRVLIEKCLITV-HN 289
           +D L  LEKK FLDIACFF G     DY+   L+ C G + V +GI  L +K LIT+  +
Sbjct: 502 YDDLDRLEKKYFLDIACFFNGLSLKVDYMKLLLKDCEGDNSVAVGIERLKDKALITISED 561

Query: 290 NTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHH 349
           N + MHD+LQE+G+++V+++S E   KRSRLW  +E+C VL    GT+ +  I L N   
Sbjct: 562 NVISMHDILQEMGREVVRQESSEYPNKRSRLWDHDEICDVLKNDKGTDAIRSICL-NLSA 620

Query: 350 ENEVYLCASAKAFSKMTNLRLLKI-------CNLQLPNGLEYLSNRLRLLGWRGYPLKFL 402
             ++ L  S   F+KMTNL+ L         C   LP GL+     LR L W  YPL+ L
Sbjct: 621 IRKLKL--SPDVFAKMTNLKFLDFYGGYNHDCLDLLPQGLQPFPTDLRYLHWVHYPLESL 678

Query: 403 PSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
           P     +K + + + YS + +LW G++ L  LK + LS SE+L  +PDF+ A NL+ L +
Sbjct: 679 PKKFSAEKLVILDLSYSLVEKLWCGVQDLINLKEVTLSFSEDLKELPDFSKAINLKVLNI 738

Query: 463 EGCTRLYEIHPSLLLHNKL---IILNMKDCTSLITLPGKILMKS-LEKLNLK-----SLP 513
           + C  L  +HPS+   +KL   + L++  C  +  LP     +S LE L L+     S+P
Sbjct: 739 QRCYMLTSVHPSIFSLDKLENIVELDLSRC-PINALPSSFGCQSKLETLVLRGTQIESIP 797

Query: 514 TTISGLKCLSTLDVSGDLKFREFPEIVEHMEHL 546
           ++I  L  L  LD+S   +    PE+   +E L
Sbjct: 798 SSIKDLTRLRKLDISDCSELLALPELPSSLETL 830



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 162/397 (40%), Gaps = 105/397 (26%)

Query: 554 TAIRGLPLSIELLSGLVLLNLK--------NCRSLEILPVTV----SNLKCLRSLKLSGC 601
           +AIR L LS ++ + +   NLK        N   L++LP  +    ++L+ L  +     
Sbjct: 619 SAIRKLKLSPDVFAKMT--NLKFLDFYGGYNHDCLDLLPQGLQPFPTDLRYLHWVHYPLE 676

Query: 602 SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
           S  KKF     S + L  L L  + ++++   ++ L  L+ + LS  ++L  LP    A+
Sbjct: 677 SLPKKF-----SAEKLVILDLSYSLVEKLWCGVQDLINLKEVTLSFSEDLKELPDFSKAI 731

Query: 662 KSLKTLNLSGCFKLENV-PE--TLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVA 718
            +LK LN+  C+ L +V P   +L ++E++ ELD+S              PIN       
Sbjct: 732 -NLKVLNIQRCYMLTSVHPSIFSLDKLENIVELDLSRC------------PIN------- 771

Query: 719 LKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
                                    ALPS  G    L+ L L      S+P+SI  L++L
Sbjct: 772 -------------------------ALPSSFGCQSKLETLVLRGTQIESIPSSIKDLTRL 806

Query: 779 LNIELEDCKRLQSLPQLPPNIRQVRVNGCASL------VTLLDALKLCKSDSTMIACLDS 832
             +++ DC  L +LP+LP ++  + V+ C SL       T+ + LK  K       C   
Sbjct: 807 RKLDISDCSELLALPELPSSLETLLVD-CVSLKSVFFPSTVAEQLKENKKRIEFWNCFK- 864

Query: 833 LKLLGNKSLAFSMLREYLEAVSNTRQHLSV-----------------------VVPGSEI 869
              L  +SL    L   +  +    QHLS                        V PGS +
Sbjct: 865 ---LDERSLINIGLNLQINLMEFAYQHLSTLEHDKVESYVDYKDILDSYQAVYVYPGSSV 921

Query: 870 PEWFMYQNEGSSITVT-RPSNLYNKKKLVGYAICCVF 905
           PEW  Y+   + + V   P +L     L+G+  C + 
Sbjct: 922 PEWLEYKTTKNDMIVDLSPPHL---SPLLGFVFCFIL 955


>gi|325683726|gb|ADZ44604.1| TIR-NBS-LRR type protein [Fragaria x ananassa]
          Length = 630

 Score =  311 bits (797), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 201/435 (46%), Positives = 274/435 (62%), Gaps = 14/435 (3%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +  R   ++ L+     DV M+GI G+GG+GKTTIA+ VY+ I H F+ S FL+NVRE +
Sbjct: 191 IQHRVRAIQNLLGVEVRDVHMVGIWGVGGIGKTTIAKAVYNSIVHRFDGSCFLENVRE-N 249

Query: 61  SKG--GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
           SKG  GLV LQ+ LL ++LK  +  + +V  GI+M+  RLQ K+VLLV+DDV D+ QL +
Sbjct: 250 SKGARGLVELQKILLREILKEREVEVTSVARGINMIKERLQYKRVLLVLDDVSDMNQLNN 309

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGV--DEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
           LA    WFG GSRIIIT+RD  LL+ HGV  D +Y+   L+  +AL+L ++ AFK  +PL
Sbjct: 310 LARQCSWFGMGSRIIITTRDRKLLRCHGVRPDLIYEVQELDEHDALELLSVIAFKRIRPL 369

Query: 177 QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
               +L+ R +RY  GLPLAL VLGS L G SV+ W + L+  E     EI D+L+ISFD
Sbjct: 370 DSYAELTKRAVRYTQGLPLALTVLGSSLRGGSVELWEAALDGSE---SREIKDVLKISFD 426

Query: 237 GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMH 295
           GL    K+ FLDIACFFKG  R++V   L+ CG      I VLIEK LI+V +   +WMH
Sbjct: 427 GLGHRAKEAFLDIACFFKGEHREHVIKILKACGSEEHF-INVLIEKALISVRYMGKIWMH 485

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DL++E+G+ IV  QSP+  G RSRLW  E+V  VL ++ GT  V GI ++     N + L
Sbjct: 486 DLIEEMGRDIVHEQSPDNPGNRSRLWFHEDVYRVLVDNIGTNNVRGIKVELPEDSNVLCL 545

Query: 356 CASAKAFSKMTNLRLLKICNLQLPNG-LEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
           CA+  +FS M NL+L+ IC     +G ++ L N LR++ W   PL+ L S+    +   I
Sbjct: 546 CAT--SFSSMKNLKLI-ICRAGRYSGVVDGLPNSLRVIDWADCPLQVLSSHTIPRELSVI 602

Query: 415 YMCYSRIGELWKGIK 429
           +M  SRI  L  G K
Sbjct: 603 HMPRSRITVLGDGYK 617


>gi|297805928|ref|XP_002870848.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316684|gb|EFH47107.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 983

 Score =  311 bits (797), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 237/780 (30%), Positives = 387/780 (49%), Gaps = 94/780 (12%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           M +   ++  L+   S +VRMIGI G  G+GKTTIARV+Y   S  FE S F++N++E+ 
Sbjct: 240 MGAHMNEMESLLCLDSDEVRMIGIWGPSGIGKTTIARVLYSQFSESFELSIFMENIKELM 299

Query: 60  -------SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVD 112
                        + LQ+Q LSQ++   D  +      + +   RL  K+VL+V+D +  
Sbjct: 300 YTRPVCSDEYSAKIQLQQQFLSQIINHKDMEL----PHLGVAQDRLNDKRVLIVLDSIDQ 355

Query: 113 VKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKT 172
             QL ++A    WFG GSRIIIT++D+ LLK HG++ +YK    +  EA Q+F M AF  
Sbjct: 356 SIQLDAIAKETRWFGHGSRIIITTQDQRLLKAHGINHIYKVEFPSAYEAYQIFCMYAFGQ 415

Query: 173 YQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQ 232
             P     +L+ ++ +  G LPL L V+GS   G    EW + L RL+I   + I  IL+
Sbjct: 416 NFPKDGFEELAWQVTKLLGNLPLGLRVMGSHFRGMPRHEWVNALPRLKIRLDASIQSILK 475

Query: 233 ISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV----- 287
            S+D L + +K +FL IAC F   +   V ++L         G+ +L EK LI +     
Sbjct: 476 FSYDALCDEDKDLFLHIACLFNNEEMVKVEDYLALSFLDVRQGLHLLAEKSLIAIEILST 535

Query: 288 HNNTLWMHDLLQELGQQIVQ----RQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIV 343
           ++ ++ +H+LL +LG+ IV+     Q   E GKR  L    ++C VLT++TG+  V GI+
Sbjct: 536 NHTSIKVHNLLVQLGRDIVRHKPGHQCIREPGKRQFLVDARDICEVLTDNTGSRNVIGIL 595

Query: 344 LDNYHHENEVYLCASAKAFSKMTNLRLLKIC--------NLQLPNGLEYLSNRLRLLGWR 395
           L+  +   +  L  S + F  M+N + L+           L LP GL  L  +LR++ W 
Sbjct: 596 LEVENLSGQ--LNISERGFEGMSNHKFLRFHGPYEGENDKLYLPQGLNNLPRKLRIIEWF 653

Query: 396 GYPLKFLPSNLQMDKTIEIYMCYSRIGELWKG--------IKHLDKLKVMILSHSENLIR 447
            +P+K LPSN      ++++M  S++  +W+G        +  L  LK M L  S++L  
Sbjct: 654 RFPMKCLPSNFCTKYLVQLHMWNSKLQNMWQGNQESRRSDLPPLGNLKRMDLRESKHLKE 713

Query: 448 MPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL 507
           +PD + A NLE+LIL GC+ L E+  S+    KL +L ++ C+ L  LP  I ++SL+ L
Sbjct: 714 LPDLSTATNLEELILYGCSSLPELPSSIGSLQKLQVLLLRGCSKLEALPTNINLESLDYL 773

Query: 508 NL------KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLE-GTAIRGLP 560
           +L      KS P   + +K L+ +  +     +E P  ++    L +L +     ++  P
Sbjct: 774 DLADCLLIKSFPEISTNIKRLNLMKTA----VKEVPSTIKSWSPLRKLEMSYNDNLKEFP 829

Query: 561 LSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL 620
            ++++++ L      N   ++ +P+ V  +  L++L L GC +L   P++  S       
Sbjct: 830 HALDIITKLYF----NDTKIQEIPLWVQKISRLQTLVLEGCKRLVTIPQLSDS------- 878

Query: 621 FLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
                           L+K+  +N   C++L RL  S      +  L    CFKL N   
Sbjct: 879 ----------------LSKVAAIN---CQSLERLDFSFHNHPEI-FLWFINCFKLNNEAR 918

Query: 681 TLGQIESLEELDISGTAVPHSTSWY----SYIPINLMRKSVALKLPSLSGLCSLRKLNLT 736
              Q  S     + G  VP + ++     S I +NL ++  +         C ++KL +T
Sbjct: 919 EFIQTSSSTLAFLPGREVPANITYRRANGSSIMVNLNQRLAS---------CWIKKLTMT 969



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 129/267 (48%), Gaps = 24/267 (8%)

Query: 623 DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
           +   +KE+P  +   T LE L L  C +L  LPSSI +L+ L+ L L GC KLE +P  +
Sbjct: 707 ESKHLKELPD-LSTATNLEELILYGCSSLPELPSSIGSLQKLQVLLLRGCSKLEALPTNI 765

Query: 683 GQIESLEELDISGTAVPHSTSWYS--YIPINLMRKSVALKLPSLSGLCSLRKLNLT-DCN 739
             +ESL+ LD++   +  S    S     +NLM+ +V     ++     LRKL ++ + N
Sbjct: 766 N-LESLDYLDLADCLLIKSFPEISTNIKRLNLMKTAVKEVPSTIKSWSPLRKLEMSYNDN 824

Query: 740 LMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
           L E     DI     + +LY +      +P  +  +S+L  + LE CKRL ++PQL  ++
Sbjct: 825 LKEFPHALDI-----ITKLYFNDTKIQEIPLWVQKISRLQTLVLEGCKRLVTIPQLSDSL 879

Query: 800 RQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQH 859
            +V    C SL  L             +  ++  K L N++      RE+++  S+T   
Sbjct: 880 SKVAAINCQSLERL--DFSFHNHPEIFLWFINCFK-LNNEA------REFIQTSSSTLAF 930

Query: 860 LSVVVPGSEIPEWFMYQN-EGSSITVT 885
           L    PG E+P    Y+   GSSI V 
Sbjct: 931 L----PGREVPANITYRRANGSSIMVN 953



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 113/268 (42%), Gaps = 46/268 (17%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
           L+ + L     LK+ P++  +  +L EL L G +S+ E+PSSI  L KL++L L  C  L
Sbjct: 700 LKRMDLRESKHLKELPDL-STATNLEELILYGCSSLPELPSSIGSLQKLQVLLLRGCSKL 758

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPIN 711
             LP++I  L+SL  L+L+ C  +++ PE    I+ L  +  +   VP +    S+ P+ 
Sbjct: 759 EALPTNI-NLESLDYLDLADCLLIKSFPEISTNIKRLNLMKTAVKEVPSTIK--SWSPLR 815

Query: 712 LMRKSVALKLPSLS-GLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVSLP 769
            +  S    L      L  + KL   D  + E  +P  +  +  L+ L L      V++P
Sbjct: 816 KLEMSYNDNLKEFPHALDIITKLYFNDTKIQE--IPLWVQKISRLQTLVLEGCKRLVTIP 873

Query: 770 TSITHLSKLLNIELEDCKRLQS-----------------------------------LP- 793
                LSK+  I  +  +RL                                     LP 
Sbjct: 874 QLSDSLSKVAAINCQSLERLDFSFHNHPEIFLWFINCFKLNNEAREFIQTSSSTLAFLPG 933

Query: 794 -QLPPNIRQVRVNGCASLVTLLDALKLC 820
            ++P NI   R NG + +V L   L  C
Sbjct: 934 REVPANITYRRANGSSIMVNLNQRLASC 961


>gi|357499321|ref|XP_003619949.1| TIR-NBS-LRR disease resistance-like protein [Medicago truncatula]
 gi|355494964|gb|AES76167.1| TIR-NBS-LRR disease resistance-like protein [Medicago truncatula]
          Length = 1065

 Score =  311 bits (797), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 212/623 (34%), Positives = 339/623 (54%), Gaps = 63/623 (10%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + S+ ++++ L+D+GS D V M+G+ G+GGLGK+T+AR +Y+ ++ +FE   FL +VRE 
Sbjct: 225 LQSQLQQVKSLLDNGSDDGVHMVGMYGIGGLGKSTLARAIYNFVADQFEGLCFLHDVREN 284

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S++  L  LQ +LL +   L +  + +V +GI ++  RL RKK+LL++DDV  ++QL +L
Sbjct: 285 SAQNNLKHLQEKLLFKTTGL-EIKLDHVSEGISIIKERLCRKKILLILDDVDSIRQLDAL 343

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG GSR+IIT+R++HLL THG+   +   GL   +  +L    AFK+ +     
Sbjct: 344 AGGLDWFGRGSRVIITTRNKHLLSTHGIKSTHAVEGLYGTDGHELLRWMAFKSDKVPSGY 403

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R + YA GLPL LE++GS L G+S++EW+ TL+  +  P  EI  IL++S+D L+
Sbjct: 404 EDILNRAVAYASGLPLVLEIVGSNLFGKSIEEWKYTLDGYDRIPNKEIQKILKVSYDALE 463

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVI-GIRVLIEKCLITVHNNTLWMHDLL 298
           E E+ +FLDIAC  KG       + L     H +   + VL++KCLI      + +HDL+
Sbjct: 464 EEEQSVFLDIACCSKGCGWREFEDMLRAHYGHCITHHLGVLVDKCLIYQSYGDMTLHDLI 523

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           +++G+ IV+++SP+E G+RSRLW ++++ HVL E++GT  +E I ++      E  +   
Sbjct: 524 EDMGKAIVRQESPKEPGERSRLWCQDDIFHVLKENSGTSKIEMIYMN--FPSMESVIDQK 581

Query: 359 AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
            KAF KMT L+ L I + +   GL+YL + LR         KF                 
Sbjct: 582 GKAFRKMTKLKTLIIEDGRFSKGLKYLPSSLR---------KF----------------- 615

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
                          +KV+ L   E+L  +PD +G  NL+KL    C  L  I  S+   
Sbjct: 616 -------------QNMKVLTLDECEHLTHIPDISGLSNLQKLTFNFCKNLITIDDSIGHL 662

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
           NKL +++   C  L   P  + + SL+ L L   P             VSG L+   FP+
Sbjct: 663 NKLELVSASCCKKLENFP-PLWLVSLKNLELSLHPC------------VSGMLR---FPK 706

Query: 539 IVEHM-EHLSELHLEGTAIRG--LPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
             + M  +++EL L    +    LP+ ++    +  L+L     ++ILP  ++    LR 
Sbjct: 707 HNDKMYSNVTELCLRECNLSDEYLPIILKWFVNVKHLDLSENVGIKILPECLNECHLLRI 766

Query: 596 LKLSGCSKLKKFPEIVRSMKDLS 618
           L L GC  L++   I  ++  LS
Sbjct: 767 LNLDGCESLEEIRGIPPNLNYLS 789



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 27/213 (12%)

Query: 604 LKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
           LK  P  +R  +++  L LD    +  +P  I  L+ L+ L  + CKNL+ +  SI  L 
Sbjct: 605 LKYLPSSLRKFQNMKVLTLDECEHLTHIPD-ISGLSNLQKLTFNFCKNLITIDDSIGHLN 663

Query: 663 SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
            L+ ++ S C KLEN P     + SL+ L++S                     S  L+ P
Sbjct: 664 KLELVSASCCKKLENFPPLW--LVSLKNLELSLHPCV----------------SGMLRFP 705

Query: 723 SLSG--LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS-LPTSIT--HLSK 777
             +     ++ +L L +CNL +  LP  +    ++K L LS+N  +  LP  +   HL +
Sbjct: 706 KHNDKMYSNVTELCLRECNLSDEYLPIILKWFVNVKHLDLSENVGIKILPECLNECHLLR 765

Query: 778 LLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
           +LN  L+ C+ L+ +  +PPN+  +    C SL
Sbjct: 766 ILN--LDGCESLEEIRGIPPNLNYLSATECLSL 796


>gi|357493433|ref|XP_003617005.1| Disease resistance protein [Medicago truncatula]
 gi|355518340|gb|AES99963.1| Disease resistance protein [Medicago truncatula]
          Length = 1491

 Score =  311 bits (797), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 239/693 (34%), Positives = 377/693 (54%), Gaps = 55/693 (7%)

Query: 4   RCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKG 63
           R EK    ++S     R++GI  MGG+GKTTIA+V +     +++   F  N +E S   
Sbjct: 199 RNEKNSECVESLLKKFRILGIWSMGGMGKTTIAKVFFAKHFAQYDHVCFA-NAKEYSLSR 257

Query: 64  GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNR 123
            L  L ++ +S     A + + +    I M   RL+ +KVL+V+D+V    Q   L  + 
Sbjct: 258 LLSELLKEEIS-----ASDVVKST---IHM--RRLRSRKVLIVLDNVESSDQFDYLCRDY 307

Query: 124 EWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLS 183
                 SR+IIT++D+ LL+   VD +Y+       ++L+LF ++AF+   P ++   L 
Sbjct: 308 HDLTQDSRLIITTKDKQLLRGR-VDWIYEVKHWEDPKSLELFCLEAFEPSNPREKYEHLL 366

Query: 184 ARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEK 243
            + I YAGG+PLAL++L   L  R ++ W S+ ++L+  P   +  +L++S+D L  L+K
Sbjct: 367 QKAITYAGGVPLALKLLALHLRSREIEFWVSSFKKLDKYPDGRLHKVLRVSYDELDALQK 426

Query: 244 KIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWMHDLLQELG 302
           KIFLDIA FF G  ++ VT  L+ CGF P  GI VL +K LITV NN T+ MHDLLQ++G
Sbjct: 427 KIFLDIAFFFIGEKKERVTKILDACGFEPNSGIVVLKDKALITVSNNHTIQMHDLLQKMG 486

Query: 303 QQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAF 362
             I+     E+    +RL        V+ E+ G+  +EGI+LD    +N V L  ++  F
Sbjct: 487 SDIICNDCGEDPATHTRL-SGTAAFEVIEENKGSSSIEGIMLD--LSQNNV-LPLTSDTF 542

Query: 363 SKMTNLRLLKI--------CNLQ---LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           +KM  LR+LK         C +    LP  L+  S +LR   W GYP + LP        
Sbjct: 543 TKMKALRILKFHAPSSLQKCTITYPYLPKFLKLFSKKLRYFEWYGYPFESLPQPFHAKFL 602

Query: 412 IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
           +EI M +S + +LW+G+K L KL+ + LS  ++LI++PDF+ A +L+ + L GC  L ++
Sbjct: 603 VEIRMPHSNVKQLWQGMKELGKLEGIDLSECKHLIKLPDFSKASSLKWVNLSGCESLVDL 662

Query: 472 HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDL 531
            PS+L  + L+ L +  CT + ++ G+  +  LEK+       ++ G K L    VS +L
Sbjct: 663 PPSVLCADMLVTLILHRCTKITSVRGEKHLNCLEKI-------SVDGCKSLKIFAVSSNL 715

Query: 532 KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
                         +  L L  T I+ L LSI  L  L  LNL + + L  LP  +S++ 
Sbjct: 716 --------------IENLDLSSTGIQTLDLSIGSLEKLKRLNLDSLK-LNCLPEGLSSVT 760

Query: 592 CLRSLKLSGCSKLKK---FPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSD 647
            +  LK+SG + + +     E+   ++ L  L + D  +  E+P++I +L+KL+ LNL D
Sbjct: 761 SISELKISGSALIVEKQLLEELFDGLQSLQILHMKDFINQFELPNNIHVLSKLKELNL-D 819

Query: 648 CKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
             N+ RLP SI  L+ L+ L+L  C +LE +PE
Sbjct: 820 GSNMKRLPESIKKLEELEILSLVNCRELECIPE 852



 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 206/480 (42%), Gaps = 87/480 (18%)

Query: 567  SGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLS---ELFLD 623
            S L  +NL  C SL  LP +V     L +L L  C+K+      VR  K L+   ++ +D
Sbjct: 646  SSLKWVNLSGCESLVDLPPSVLCADMLVTLILHRCTKITS----VRGEKHLNCLEKISVD 701

Query: 624  G-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
            G  S+K    S  L+  L+L        +  L  SI +L+ LK LNL    KL  +PE L
Sbjct: 702  GCKSLKIFAVSSNLIENLDL----SSTGIQTLDLSIGSLEKLKRLNLDS-LKLNCLPEGL 756

Query: 683  GQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLME 742
              + S+ EL ISG+A+             ++ K +  +L    GL SL+ L++ D  + +
Sbjct: 757  SSVTSISELKISGSAL-------------IVEKQLLEEL--FDGLQSLQILHMKDF-INQ 800

Query: 743  GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
              LP++I  L  LKEL L  ++   LP SI  L +L  + L +C+ L+ +P+LPP +  +
Sbjct: 801  FELPNNIHVLSKLKELNLDGSNMKRLPESIKKLEELEILSLVNCRELECIPELPPLVTLL 860

Query: 803  RVNGCASLVTLLDALKLCK---SDSTMIACLDSLKLLGN------KSLAFSMLREYLEAV 853
                C SLV++ +   L       +  I+  +SL L G+      ++L  +M+    + V
Sbjct: 861  NAVNCTSLVSVSNLKGLATMMMGKTKHISFSNSLNLDGHSLSLIMENLNLTMMSAVFQNV 920

Query: 854  SNTRQHLSV----------VVPGSEIPEWFMYQNEG-SSITVTRPSNLYNKKKLVGYAIC 902
            S  R  + V            PG+ IP  F  Q    SSIT+T    L  +  L+G+   
Sbjct: 921  SVRRLRVKVHSYNYNSVDACRPGTSIPRLFKCQTAADSSITITL---LPERSNLLGFIYS 977

Query: 903  CVFHVLKNSRGNNCFGSYPTHQLNCHIG-HGIYGIGFRDKFGQAGSDHLWLLYLSRQTCY 961
                VL  + GN         +  C +G  GI          +  SDH ++ Y       
Sbjct: 978  V---VLSPAGGNGMKKGEARIKCQCSLGKEGIKASWLNTHVTELNSDHTYVWY------- 1027

Query: 962  DIRLPLESNLEPFESNHVNVSFEPWL--------------GQGLEVKMCGLHPVYMDEVE 1007
                      +PF  + +   ++P +                 + +K CG+  V + E+E
Sbjct: 1028 ----------DPFHCDSILKFYQPKICFEFYVTNDTTGEVDSSIHIKECGVRQVSVAELE 1077


>gi|357513919|ref|XP_003627248.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355521270|gb|AET01724.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1106

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 222/629 (35%), Positives = 338/629 (53%), Gaps = 46/629 (7%)

Query: 3   SRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK 62
           SR E L   +   S DVR IGI GM G+GKTTIA  VY ++  E+    F  NVRE   +
Sbjct: 227 SRVESL---LQVESQDVRAIGIWGMSGIGKTTIAEEVYSMLCSEYSGCYFKANVREECRR 283

Query: 63  GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGN 122
            G++ L+++L S LL   D  I            RL+  KVL+V+DDV D +QL  L G 
Sbjct: 284 HGIIHLKKKLFSTLLGEQDLKIDTPHRLPYRDFVRLRTMKVLVVLDDVSDQEQLDILIGT 343

Query: 123 REWFGSGSRIIITSRDEHLL-KTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ-ECV 180
            +WFG GSRIIIT+ D+ +L K    +++Y+   LN+D++L+LFN+ AF+  Q  Q E  
Sbjct: 344 LDWFGKGSRIIITTVDKQVLGKGVFANDIYEVRPLNFDDSLRLFNLNAFEQNQTYQIEYY 403

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS R+++YA G+PL LE+LG  L G+   EW   LER++  P  +  +I+++S++ L  
Sbjct: 404 ELSKRMVKYAKGIPLILEILGRKLRGKDKKEWEDQLERVKKVPIKKFHEIIRLSYNDLNR 463

Query: 241 LEKKIFLDIACFFKGN--DRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDL 297
            EK++FLDIACF  G   + D +    +  G+   + +  L  K LI +  +N + MH +
Sbjct: 464 HEKRMFLDIACFIDGLHLNVDDIKLLAKDLGYPVGVELESLKNKALINISPDNVVSMHTI 523

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           +QE   + V+ +S ++   +SRL  + +   VL  + G+E +  I  D    ++   L  
Sbjct: 524 IQETAWEFVREESIDDPENQSRL-VDYDTYQVLKHNRGSEAIRSIATDFSIIKD---LQL 579

Query: 358 SAKAFSKMTNLRLLKIC------------NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSN 405
           ++K F+KM  L+ L I             +L LP GL+ L + LR L W  YPL+ LPS 
Sbjct: 580 NSKVFAKMNKLQYLDIYTKGYYVFFQIPRSLNLPQGLKSLPDELRYLRWAYYPLESLPSK 639

Query: 406 LQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
              +K + + +  S++ +LW   K +  LK +ILS S  L+ +P+ + A NL  + L  C
Sbjct: 640 FNGEKLVVLNLQNSQVKKLWHEDKDVVNLKFLILSLSSQLMELPNLSKAKNLAIVDLRMC 699

Query: 466 TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTL 525
            RL  IHPS+   NKL  L++  C SL +L   I + SL  L+L                
Sbjct: 700 GRLTSIHPSVFSLNKLEKLDLGGCFSLTSLKSNIHLSSLRYLSL---------------- 743

Query: 526 DVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPV 585
             +G +K +EF    + M     L+LE T I+ L  SI L + L  L L +   +E LP 
Sbjct: 744 --AGCIKLKEFSVTSKEM---VLLNLEHTGIKQLSSSIGLQTKLEKLLLSHS-FIENLPK 797

Query: 586 TVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
           ++  L  LR L+L  C KL++ P++  S+
Sbjct: 798 SIRRLSSLRHLELRHCRKLQRLPKLPSSL 826



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 141/279 (50%), Gaps = 31/279 (11%)

Query: 620 LFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVP 679
           L L  + +K++    + +  L+ L LS    L+ LP+ +   K+L  ++L  C +L ++ 
Sbjct: 648 LNLQNSQVKKLWHEDKDVVNLKFLILSLSSQLMELPN-LSKAKNLAIVDLRMCGRLTSIH 706

Query: 680 ETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCN 739
            ++  +  LE+LD+ G      TS  S I ++      +L+  SL+G   L++ ++T   
Sbjct: 707 PSVFSLNKLEKLDLGGCF--SLTSLKSNIHLS------SLRYLSLAGCIKLKEFSVTSKE 758

Query: 740 LM--------EGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQS 791
           ++           L S IG    L++L LS +   +LP SI  LS L ++EL  C++LQ 
Sbjct: 759 MVLLNLEHTGIKQLSSSIGLQTKLEKLLLSHSFIENLPKSIRRLSSLRHLELRHCRKLQR 818

Query: 792 LPQLPPNIRQVRVNGCASL--VTLLD-ALKLCKSDSTMIACLDSLKLLGNKSLA------ 842
           LP+LP ++  +   GC SL  VT    AL++ K + T ++  + +KL+ +   A      
Sbjct: 819 LPKLPSSLITLDATGCVSLENVTFPSRALQVLKENKTKVSFWNCVKLVEHSLKAIELNAQ 878

Query: 843 FSMLREYLEAVSNTRQHL-----SVVVPGSEIPEWFMYQ 876
            +M++   + +S +  H      + V PGS +P+W +Y+
Sbjct: 879 INMMKFAHKQISTSSDHDYDAQGTYVYPGSSVPKWLVYR 917


>gi|15242334|ref|NP_199333.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007833|gb|AED95216.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1261

 Score =  311 bits (796), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 235/750 (31%), Positives = 360/750 (48%), Gaps = 108/750 (14%)

Query: 1   MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +++R E+L+  ++  S +V R IG+ GM G+GKTT+A+ ++      F    FLD+V + 
Sbjct: 218 IETRVEQLKEKLELKSENVTRFIGVVGMPGIGKTTLAKRLFSECGKHFLHKMFLDDVSQK 277

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDG------IDMLGSRLQRKKVLLVIDDVVDV 113
                  +L   LL  L K  +N      DG      ID + ++LQ KKV +V+D+V D 
Sbjct: 278 PEPFLDETLHTDLLLGLWKSKNNG----RDGNRAKLSIDYIKTQLQGKKVFVVLDNVGDK 333

Query: 114 KQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKT- 172
            Q+  + G  +W  +GSRI+IT+  + +++  G++  Y   GL+  +AL  FN  AF   
Sbjct: 334 SQIDKILGGCDWIKAGSRIVITTSSKSVIQ--GLNSTYLVPGLSSCDALNHFNYHAFSAS 391

Query: 173 ---YQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILD 229
              YQP      L+ + + Y+ G P  L++L   L  +    W+  L  L   P + I D
Sbjct: 392 DGFYQP--SFTDLAKQFVDYSMGHPSVLKLLARELRSKDESYWKEKLSALANSPSNTIQD 449

Query: 230 ILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN 289
           +L+I +D L+E  K +FLDIA FF+  +  YV   L          I  L +K LI +  
Sbjct: 450 VLRIPYDELKEQHKIVFLDIAYFFRFENESYVRRLLGSSAHADASEITDLADKFLIDISG 509

Query: 290 NTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHH 349
           + + M+DLL      +  + S E      RL K  E+  VL        V G+ LD +  
Sbjct: 510 DRVEMNDLLYTFAIGLNSQASSENTTSERRLSKHSEIVDVLMNKAEATKVRGVYLDMFEV 569

Query: 350 ENEVYLCASAKAFSKMTNLRLLKICN-------------LQLPNGLEYLSNRLRLLGWRG 396
           +    +   +  F+KM +LR LK  N             L  P GLE+L   LR L W  
Sbjct: 570 KE---MGLDSDTFNKMDDLRYLKFYNSHCHRECEAEDSKLNFPEGLEFLPQELRYLNWLK 626

Query: 397 YPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPN 456
           YP K LP N      I++ + YS+I ++W+  K    L+ + L+HS  L  +   + A  
Sbjct: 627 YPEKNLPINFDPKNLIDLKLPYSQIEQIWEEEKDTSNLQWLDLNHSSKLHSLSGLSRAQK 686

Query: 457 LEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTI 516
           L+ + LEGCT L  +   L     L+ LN++ CTSL +LP                  T+
Sbjct: 687 LQSINLEGCTGLKTLPQVLQNMESLMFLNLRGCTSLESLPD----------------ITL 730

Query: 517 SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
            GL+   TL +S   +F+EF  I +++E   EL+L+GTAI+ LP +I  L  L+ L LK+
Sbjct: 731 VGLR---TLILSNCSRFKEFKLIAKNLE---ELYLDGTAIKELPSTIGDLQKLISLKLKD 784

Query: 577 CRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPS---- 632
           C++L  LP ++ NLK ++ + LSGCS L+ FPE+ +++K L  L LDGT+IK++P     
Sbjct: 785 CKNLLSLPDSIGNLKAIQEIILSGCSSLESFPEVNQNLKHLKTLLLDGTAIKKIPDILHH 844

Query: 633 --------------------------------------------SIELLTKLELLNLSDC 648
                                                       SI  L  L  L+L  C
Sbjct: 845 LSPDQGLTSSQSNCHLCEWPRGIYGLSSVRRLSLSSNEFRILPRSIGYLYHLNWLDLKHC 904

Query: 649 KNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
           KNLV +P   +   +L+ L+  GC  LE +
Sbjct: 905 KNLVSVP---MLPPNLQWLDAHGCISLETI 931



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 148/445 (33%), Positives = 222/445 (49%), Gaps = 65/445 (14%)

Query: 544  EHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
            + L  ++LEG T ++ LP  ++ +  L+ LNL+ C SLE LP     L  LR+L LS CS
Sbjct: 685  QKLQSINLEGCTGLKTLPQVLQNMESLMFLNLRGCTSLESLPDIT--LVGLRTLILSNCS 742

Query: 603  KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
            + K+F  I    K+L EL+LDGT+IKE+PS+I  L KL  L L DCKNL+ LP SI  LK
Sbjct: 743  RFKEFKLIA---KNLEELYLDGTAIKELPSTIGDLQKLISLKLKDCKNLLSLPDSIGNLK 799

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
            +++ + LSGC  LE+ PE    ++ L+ L + GTA+         IP       +   L 
Sbjct: 800  AIQEIILSGCSSLESFPEVNQNLKHLKTLLLDGTAIKK-------IP------DILHHLS 846

Query: 723  SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIE 782
               GL S +    ++C+L E   P  I  L S++ L LS N F  LP SI +L  L  ++
Sbjct: 847  PDQGLTSSQ----SNCHLCE--WPRGIYGLSSVRRLSLSSNEFRILPRSIGYLYHLNWLD 900

Query: 783  LEDCKRLQSLPQLPPNIRQVRVNGCASLVT-------LLDALKLCKSDSTMIACLDSLKL 835
            L+ CK L S+P LPPN++ +  +GC SL T       LL   +   S      C    K+
Sbjct: 901  LKHCKNLVSVPMLPPNLQWLDAHGCISLETISILSDPLLAETEHLHSTFIFTNCTKLYKV 960

Query: 836  LGNKSLAFSMLREYLEAVSNTRQH----------LSVVVPGSEIPEWFMYQNEGSSITVT 885
              N   ++   R+ ++ +SN              + +  PG ++P WF ++  G  +   
Sbjct: 961  EENSIESYP--RKKIQLMSNALARYEKGLALDVLIGICFPGWQVPGWFNHRTVGLELKQN 1018

Query: 886  RPSNLYNKKKLVGYAICCVF----HVLKNSR-GNNCFGSYPTH-----QLNCHIG----H 931
             P + +N   L G A+C V     ++ KN+R    C G +        Q +C +G    H
Sbjct: 1019 LPRH-WNAGGLAGIALCAVVSFKDYISKNNRLLVTCSGEFKKEDKTLFQFSCILGGWTEH 1077

Query: 932  GIYGIGFRDKFGQAGSDHLWLLYLS 956
            G Y      +  +  SDH+++ Y S
Sbjct: 1078 GSY------EAREIKSDHVFIGYTS 1096


>gi|297791295|ref|XP_002863532.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309367|gb|EFH39791.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1184

 Score =  311 bits (796), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 240/771 (31%), Positives = 376/771 (48%), Gaps = 93/771 (12%)

Query: 4   RCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKG 63
           R ++L   +D       +IG+ GM G+GKTT+ + +++   ++F     +D +R  S+  
Sbjct: 213 RLKELEEKLDRTIKKTCIIGVVGMPGIGKTTLLKELFNKWQNKFNRCALIDEIRGKSNPS 272

Query: 64  -GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGN 122
                L + L+ +LL    +++ NV D  ++    L  +KVL+++DDV   +Q+ +L G 
Sbjct: 273 EDFDILPKLLVRELLAFNVSTLENVEDPYEVFKGLLLNEKVLVILDDVSKSEQIDALLGK 332

Query: 123 REWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQL 182
           R+W   GSRI+I + D  LLK    D    P  LN+ + L+LF+  AF    P ++ +QL
Sbjct: 333 RDWITEGSRIVIATNDMSLLKDWVTDTYVVPL-LNHQDGLKLFHYHAFDEANPPEDFMQL 391

Query: 183 SARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELE 242
           S   + +A GLPLAL++LG  L G+   +W    + L   P   I  + ++S+D L   +
Sbjct: 392 SKEFVHFARGLPLALKILGKELYGKGRLQWEEKRKLLAESPSPFIESVFRVSYDELSSDQ 451

Query: 243 KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELG 302
           KK FLDIAC F+  D  YV + L       +  ++ L +K LI   +  + MHDLL    
Sbjct: 452 KKAFLDIAC-FRSQDVAYVESLLASS--EAMSAVKALTDKFLINTCDGRVEMHDLLYTFS 508

Query: 303 QQIVQRQSPEELGKRSRLWKEEEV-----CHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           +++  + S E+     RLW+ +++      +V+ +      V GI LD    + E  L  
Sbjct: 509 RELDPKTSTEDDRTGRRLWRHQDIIKEGKINVVQKEMRAAHVRGIFLDLSQVKGETSL-- 566

Query: 358 SAKAFSKMTNLRLLKICN------------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSN 405
           +   F++MTNLR LK+ N            + +P+GL+     +R L W  +PL  LP  
Sbjct: 567 AKDHFNRMTNLRYLKVYNSHCPQECKTENRINIPDGLKLPLKEVRCLHWLKFPLDELPEA 626

Query: 406 LQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
                 +++ + YS I  LW+G K    LK + L+HS  L  +   + APNL+ L LEGC
Sbjct: 627 FNPINLVDLKLPYSEIERLWEGDKDTPVLKWVDLNHSSMLSSLSGLSKAPNLQGLNLEGC 686

Query: 466 TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTL 525
           TRL                                 +SL  ++ KS          L +L
Sbjct: 687 TRL---------------------------------ESLADVDSKS----------LKSL 703

Query: 526 DVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPV 585
            +SG   F++FP I E++E    LHL+ TAI  LP ++  L  LVLLN+K+C  LE +P 
Sbjct: 704 TLSGCTSFKKFPLIPENLE---ALHLDRTAISQLPDNVVNLKKLVLLNMKDCELLENIPT 760

Query: 586 TVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNL 645
            V  LK L+ L LSGC KL+ FPE+ +S   L  L LD T+IK +P     L  ++ L L
Sbjct: 761 CVDKLKALQKLVLSGCKKLQNFPEVNKS--SLKILLLDRTAIKTMPQ----LPSVQYLCL 814

Query: 646 SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWY 705
           S   +L  +P+ I  L  L  L+L  C  L +VPE      +L+  D  G +        
Sbjct: 815 SFNDHLSCIPADINQLSQLTRLDLKYCKSLTSVPEL---PPNLQYFDADGCSA------- 864

Query: 706 SYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLK 756
               +  + K +A  +P++   C+    N T+C  +E A   +I +    K
Sbjct: 865 ----LKTVAKPLARIMPTVQNHCT---FNFTNCGNLEQAAKEEIASYAQRK 908



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 162/350 (46%), Gaps = 73/350 (20%)

Query: 572 LNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP 631
           LNL+ C  LE L    S  K L+SL LSGC+  KKFP I    ++L  L LD T+I ++P
Sbjct: 681 LNLEGCTRLESLADVDS--KSLKSLTLSGCTSFKKFPLIP---ENLEALHLDRTAISQLP 735

Query: 632 SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
            ++  L KL LLN+ DC+ L  +P+ +  LK+L+ L LSGC KL+N PE      SL+ L
Sbjct: 736 DNVVNLKKLVLLNMKDCELLENIPTCVDKLKALQKLVLSGCKKLQNFPEV--NKSSLKIL 793

Query: 692 DISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGN 751
            +  TA+         +P          +LPS+  LC                       
Sbjct: 794 LLDRTAI-------KTMP----------QLPSVQYLC----------------------- 813

Query: 752 LCSLKELYLSKNSFVS-LPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
                   LS N  +S +P  I  LS+L  ++L+ CK L S+P+LPPN++    +GC++L
Sbjct: 814 --------LSFNDHLSCIPADINQLSQLTRLDLKYCKSLTSVPELPPNLQYFDADGCSAL 865

Query: 811 VTLLDALKLCKSDSTMIACLDSLKLLGN-----KSLAFSMLREYLEAVSNTRQH------ 859
            T+   L      +    C  +    GN     K    S  +   + +S+ R+H      
Sbjct: 866 KTVAKPLARIMP-TVQNHCTFNFTNCGNLEQAAKEEIASYAQRKCQLLSDARKHYDEGLS 924

Query: 860 ----LSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
                +   PG E+P WF +   GS + +    + ++ K L G A+C V 
Sbjct: 925 SEALFTTCFPGCEVPSWFCHDGVGSRLELKLLPH-WHDKSLSGIALCAVI 973


>gi|449447735|ref|XP_004141623.1| PREDICTED: uncharacterized protein LOC101204365 [Cucumis sativus]
          Length = 1913

 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 175/391 (44%), Positives = 254/391 (64%), Gaps = 4/391 (1%)

Query: 4    RCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKG 63
            R  ++  LM  G  DVR+IGI GMGG+GKTTIAR++Y  +SH F+   FLDNV+E   K 
Sbjct: 822  RLHEINKLMGIGLDDVRLIGIWGMGGIGKTTIARIIYKSVSHLFDGCYFLDNVKETLKKE 881

Query: 64   GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNR 123
            G+ SLQ++LL+  L   +  I N  +G  ++  R+   K L+++DDV  + QLQ LAG  
Sbjct: 882  GIASLQQKLLTGALMKRNIDIPNA-EGATLIKRRMSNIKALIILDDVDHLSQLQQLAGGS 940

Query: 124  EWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLS 183
            +WFGSGSR+I+T+R+EHLL +HG+   Y    L  +E +QLF+ KAF    P +    L 
Sbjct: 941  DWFGSGSRVIVTTREEHLLISHGIKRRYNVEVLKIEEGIQLFSQKAFGEDHPKKGYFDLC 1000

Query: 184  ARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEK 243
            ++++ YAGGLPLA+EVLGS L  + +++W   +++L      EI++ L+IS+  L++ ++
Sbjct: 1001 SQVVDYAGGLPLAIEVLGSSLRNKPMEDWIDAVKKLWEVRDKEIIEKLKISYYMLEKDDR 1060

Query: 244  KIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQ 303
            +IFLDIACFFK   +      LE  GF  V G+ +L EK LIT  +  + MHDL+QE+GQ
Sbjct: 1061 EIFLDIACFFKRKSKKQAIEILESFGFPAVFGLDILKEKSLITTPHEKIQMHDLIQEMGQ 1120

Query: 304  QIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFS 363
            +IV  + P+E  KRSRLW  E++   L+   GTE ++GI++D    E E +L  +AKAF 
Sbjct: 1121 KIVNEKFPDEPEKRSRLWLREDITRALSHDQGTEAIKGIMMD-LDEEGESHL--NAKAFF 1177

Query: 364  KMTNLRLLKICNLQLPNGLEYLSNRLRLLGW 394
             MTNLR+LK+ N+ L   +EYLS++LR L W
Sbjct: 1178 SMTNLRILKLNNVHLSEEIEYLSDQLRFLNW 1208



 Score = 43.5 bits (101), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 68/164 (41%), Gaps = 13/164 (7%)

Query: 865  PGSEIPE-WFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTH 923
            P  EI + WF  Q +  S+T+  P NL+  KK +G A   +F    NS  +  F SY   
Sbjct: 485  PLGEISKRWFTLQVKRPSVTIKVPPNLHKNKKWMGLAFFAIFASDINSNISQSF-SYQLE 543

Query: 924  QLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSF 983
                 +G     I   D      S  LW+ Y  R+  Y  RL    NL         VSF
Sbjct: 544  FDEYPLGRPSI-IRLHDGAFSDDSRQLWVSYEPREV-YPYRLNKWRNLR--------VSF 593

Query: 984  EPWLGQGLEVKMCGLHPVYMDEVEELDQTTNQPSRFTVYNLNEF 1027
             P   Q  +V +CG   +Y ++++E   T          NL+EF
Sbjct: 594  LPSCSQ-TKVILCGARLLYKEDLDEFVDTIIDSVLGCSINLHEF 636



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 11/133 (8%)

Query: 787  KRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSML 846
            + + S P+L P+ +  +V   +S +     ++  +SD   I       +L  K+L  ++L
Sbjct: 1462 RTIGSFPRLQPSRQPRKVIEDSSTMNTTFEVEENESDDNSI-------ILKRKNLKATLL 1514

Query: 847  REYLEAVSNTRQHLSVVVPGSEIPE-WFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
            R + E       +   + P  E+P  +F +Q E   IT+  P NL+  KK +G A   VF
Sbjct: 1515 RTFEELKLYGEYY---IFPKKEMPRSFFNFQLEEPEITIKIPPNLHKDKKWMGCAFFVVF 1571

Query: 906  HVLKNSRGNNCFG 918
             V +NS  ++ F 
Sbjct: 1572 SVDENSPKSHSFS 1584


>gi|147828745|emb|CAN72925.1| hypothetical protein VITISV_027143 [Vitis vinifera]
          Length = 726

 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 224/661 (33%), Positives = 327/661 (49%), Gaps = 144/661 (21%)

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL+ L GN+ W+G GSRIIIT+RD+  L    VD +Y+   LN +EAL+LF+  AF++  
Sbjct: 3   QLEFLVGNQTWYGKGSRIIITTRDKRCLTMLNVDYLYEVEELNSNEALELFSQYAFRSNL 62

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           P  +   LS + ++Y  GLPLAL VLGSFL G+++ EW S L +LE EP  EI ++L+IS
Sbjct: 63  PKDDFENLSHQAVQYCEGLPLALRVLGSFLYGKTIREWESELHKLEKEPEVEIQNVLKIS 122

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
           FDGL   ++ I LDIACFF+G D+D+ +   +G   +  I I+VL E+CLIT+ NN L M
Sbjct: 123 FDGLDITQQMILLDIACFFQGEDKDFASKIWDGYELYSEINIKVLTERCLITISNNRLHM 182

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           H L++++ ++IVQ + P++  K SRLW  +++C       G E VE I LD    +   +
Sbjct: 183 HGLIEKMCKKIVQ-EHPKDPSKWSRLWNPDDICCKFESEEGMENVETISLDLSRSKENWF 241

Query: 355 ----LCASAKAFSKMTNLRLLKI-------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLP 403
                    K F+KM  LRLLK+         + LP   E+                  P
Sbjct: 242 TTKIFAQMKKVFAKMKKLRLLKVYYSLGDEXKMSLPKDFEF------------------P 283

Query: 404 SNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
            NL        Y+             H ++LK + LS+S+ LI++P F+  P LEKL LE
Sbjct: 284 PNLN-------YL-------------HWEELKFIDLSNSQQLIKIPKFSRMPKLEKLNLE 323

Query: 464 GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK-----SLPTTISG 518
           GC    ++H S+   ++                    MK   +LN         P++I  
Sbjct: 324 GCVSFNKLHSSIGTFSE--------------------MKFFRELNFSESGIGEFPSSIGS 363

Query: 519 LKCLSTLDVSGDLKFREFPEI-VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNC 577
           L  L TL++S   KF +FP+I   +M HL  L L  +              L+ L+L+ C
Sbjct: 364 LISLETLNLSKCSKFEKFPDIFFVNMRHLKTLRLSDSG---------HFPRLLYLHLRKC 414

Query: 578 RSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELL 637
           ++L  +P  +  L+ L+   L+ CS L+ FPEI+   K        G S+++     + L
Sbjct: 415 KNLRSVPSNILQLESLQICYLNDCSNLEIFPEIMEHSK--------GLSLRQ-----KYL 461

Query: 638 TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA 697
            +LE   LS+C+NL  LPSSI  L  L  L +  C KL  +P+ L  ++ LEELD+SG  
Sbjct: 462 GRLE---LSNCENLETLPSSIGNLTGLHALLVRNCPKLHKLPDNLRSMQ-LEELDVSG-- 515

Query: 698 VPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKE 757
                                                   CNLM GA+P D+  L SL+ 
Sbjct: 516 ----------------------------------------CNLMAGAIPDDLWCLFSLQS 535

Query: 758 L 758
           L
Sbjct: 536 L 536



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 108/431 (25%), Positives = 164/431 (38%), Gaps = 117/431 (27%)

Query: 509 LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSG 568
           +K +   +  L+ L      GD      P+  E   +L+ LH E                
Sbjct: 249 MKKVFAKMKKLRLLKVYYSLGDEXKMSLPKDFEFPPNLNYLHWEE--------------- 293

Query: 569 LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRS---MKDLSELFLDGT 625
           L  ++L N + L  +P   S +  L  L L GC    K    + +   MK   EL    +
Sbjct: 294 LKFIDLSNSQQLIKIP-KFSRMPKLEKLNLEGCVSFNKLHSSIGTFSEMKFFRELNFSES 352

Query: 626 SIKEVPSSIELLTKLELLNLSDCKNLVRLPS-SIIALKSLKTLNLSG------------- 671
            I E PSSI  L  LE LNLS C    + P    + ++ LKTL LS              
Sbjct: 353 GIGEFPSSIGSLISLETLNLSKCSKFEKFPDIFFVNMRHLKTLRLSDSGHFPRLLYLHLR 412

Query: 672 -CFKLENVPETLGQIESLE--------ELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
            C  L +VP  + Q+ESL+         L+I    + HS             K ++L+  
Sbjct: 413 KCKNLRSVPSNILQLESLQICYLNDCSNLEIFPEIMEHS-------------KGLSLRQK 459

Query: 723 SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIE 782
            L       +L L++C  +E  LPS IGNL  L  L +                      
Sbjct: 460 YLG------RLELSNCENLE-TLPSSIGNLTGLHALLV---------------------- 490

Query: 783 LEDCKRLQSLPQLPPNIRQVR-----VNGCASLVTLLDALKLCKSDSTMIACLDSLKLLG 837
             +C +L    +LP N+R ++     V+GC  +   +            + CL SL+   
Sbjct: 491 -RNCPKLH---KLPDNLRSMQLEELDVSGCNLMAGAI---------PDDLWCLFSLQ--- 534

Query: 838 NKSLAFSMLREYLEAVS----NTRQHLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYN 892
                   L EY E  +    +   H+ V++ G   IP W  +++ G  IT+  P N Y 
Sbjct: 535 -------SLNEYFEWATYWEDSEDYHVHVIILGRRGIPXWISHKSMGDEITIDLPKNWYE 587

Query: 893 KKKLVGYAICC 903
               +G+A+ C
Sbjct: 588 DNNFLGFALFC 598


>gi|356532838|ref|XP_003534977.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1055

 Score =  310 bits (793), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 232/671 (34%), Positives = 355/671 (52%), Gaps = 40/671 (5%)

Query: 18  DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLL 77
           D+R+IG+ GMGG+GKT +A  V+  +   +    FL N RE S K G++SL+ ++ S+LL
Sbjct: 204 DIRLIGLWGMGGIGKTILAEQVFIKLRSGYGGCLFLANEREQSRKHGMLSLKEKVFSELL 263

Query: 78  KLADNSIWNVFDGI-DMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITS 136
              +    +  + + D +  R+ R KVL+V+DDV D   L+ L G    FGSGSRII+T+
Sbjct: 264 --GNGVKIDTPNSLPDDIVRRIGRMKVLIVLDDVNDSNHLEKLLGPLGNFGSGSRIIVTT 321

Query: 137 RDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLA 196
           RD  +LK +  DEVY     + ++AL+LFN+  F      +E   LS R++ YA G+PL 
Sbjct: 322 RDMQVLKANKADEVYPLREFSLNQALELFNLNFFNQCDDQREYDNLSKRVVNYAKGIPLV 381

Query: 197 LEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGN 256
           L  L   L  R+ +EW S L++LE  P  E+ D +++S+D L   E++IFLD+A FF  +
Sbjct: 382 LNELAYLLRARNKEEWGSELDKLEKIPLPEVYDRMKLSYDDLDPKEQQIFLDLAFFFGRS 441

Query: 257 DRDYVTNFLEG-------CGFHPVIGIRVLIEKCLIT-VHNNTLWMHDLLQELGQQIVQR 308
             +   ++L+         G    I +  + +K LIT   +N + MHD LQ + Q+IV+R
Sbjct: 442 HTEIKVDYLKSLLKKDGESGDSVFIVLERMKDKALITSSKDNFISMHDSLQVMAQEIVRR 501

Query: 309 QSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNL 368
           +S    G  SRLW  +++   +     TE +  I + N     E  L  +   F+KM++L
Sbjct: 502 KS-SNTGSHSRLWDLDDIHGEMKNDKVTEAIRSIQI-NLPKIKEQKL--THHIFAKMSSL 557

Query: 369 RLLKIC--------NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
           + LKI          L L   L++ ++ LR L W   PLK LP +   +K + + +  S+
Sbjct: 558 KFLKISGEDNYGNDQLILAEELQFSASELRFLCWDHCPLKSLPKSFSKEKLVMLKLLRSK 617

Query: 421 IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
           I +LW G+++L  LK + LS SE L  +PD + A NLE L+L GC+ L  +HPS+    K
Sbjct: 618 IEKLWDGVQNLVNLKEINLSGSEKLKELPDLSKATNLEVLLLRGCSMLTSVHPSVFSLIK 677

Query: 481 LIILNMKDCTSLITLPGKILMK----SLEK-LNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
           L  L++  C SL  L    +      +LE+ +NL+        +K L      G  K +E
Sbjct: 678 LEKLDLYGCGSLTILSSHSICSLSYLNLERCVNLREFSVMSMNMKDLRL----GWTKVKE 733

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
            P   E    L  LHL+G+AI  LP S   L+ L+ L + NC +L+ +P     LK L +
Sbjct: 734 LPSSFEQQSKLKLLHLKGSAIERLPSSFNNLTQLLHLEVSNCSNLQTIPELPPLLKTLNA 793

Query: 596 LKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEV--PSSIELLTK-LELLNLSDCKNLV 652
                C+ L   PEI  S+K LS   +D  S++ V   S++E L K    +   +C NL 
Sbjct: 794 ---QSCTSLLTLPEISLSIKTLSA--IDCKSLETVFLSSAVEQLKKNRRQVRFWNCLNLN 848

Query: 653 RLPSSIIALKS 663
           +     IAL +
Sbjct: 849 KDSLVAIALNA 859



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 168/391 (42%), Gaps = 82/391 (20%)

Query: 570 VLLNLKNCRSLEILPVTVSNLKCLRSLKLSG-----CSKLKKFPEIVRSMKDLSELFLDG 624
           + +NL   +  ++     + +  L+ LK+SG       +L    E+  S  +L  L  D 
Sbjct: 534 IQINLPKIKEQKLTHHIFAKMSSLKFLKISGEDNYGNDQLILAEELQFSASELRFLCWDH 593

Query: 625 TSIKEVPSSI--ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
             +K +P S   E L  L+LL       + +L   +  L +LK +NLSG  KL+ +P+ L
Sbjct: 594 CPLKSLPKSFSKEKLVMLKLLR----SKIEKLWDGVQNLVNLKEINLSGSEKLKELPD-L 648

Query: 683 GQIESLEELDISGTAVPHSTSWYSYIPINLMRKSV----ALKLPSLSGLCSLRKLNLTDC 738
            +  +LE L + G ++  S     +  I L +  +    +L + S   +CSL  LNL  C
Sbjct: 649 SKATNLEVLLLRGCSMLTSVHPSVFSLIKLEKLDLYGCGSLTILSSHSICSLSYLNLERC 708

Query: 739 -NLMEGA------------------LPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLL 779
            NL E +                  LPS       LK L+L  ++   LP+S  +L++LL
Sbjct: 709 VNLREFSVMSMNMKDLRLGWTKVKELPSSFEQQSKLKLLHLKGSAIERLPSSFNNLTQLL 768

Query: 780 NIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL---------LDALKLCKSDSTMI--A 828
           ++E+ +C  LQ++P+LPP ++ +    C SL+TL         L A+  CKS  T+   +
Sbjct: 769 HLEVSNCSNLQTIPELPPLLKTLNAQSCTSLLTLPEISLSIKTLSAID-CKSLETVFLSS 827

Query: 829 CLDSLKL------------LGNKSLAFSMLREYLEAVSNTRQHLS--------------- 861
            ++ LK             L   SL    L   ++ +    QHLS               
Sbjct: 828 AVEQLKKNRRQVRFWNCLNLNKDSLVAIALNAQIDVMKFANQHLSPPSQDLVQNYDDYDA 887

Query: 862 --------VVVPGSEIPEWFMYQNEGSSITV 884
                    V PGS +PEW  Y+   + I +
Sbjct: 888 NHRSYQVVYVYPGSNVPEWLEYKTTNAYIII 918


>gi|356558721|ref|XP_003547651.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1054

 Score =  310 bits (793), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 222/624 (35%), Positives = 347/624 (55%), Gaps = 46/624 (7%)

Query: 11  LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQR 70
           L+   ++DVR+IGI G+GG+GKTTIA+ VY+ +  E+E   FL N+RE S + G++SL++
Sbjct: 230 LLQLEAADVRIIGIWGIGGIGKTTIAQEVYNKLCFEYEGCCFLANIREESGRHGIISLKK 289

Query: 71  QLLSQLLKLADNSIWNVFDGI-DMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG 129
            L S LL      I +  +G+   +  RL R KVL+++DDV D +QL++LA   +WFG G
Sbjct: 290 NLFSTLLGEEYLKI-DTPNGLPQYVERRLHRMKVLIILDDVNDSEQLETLA-RTDWFGPG 347

Query: 130 SRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRY 189
           SRII+T+RD  +L     + +Y+   LN+DE+L LFN+  FK   P  E  +LS +++ Y
Sbjct: 348 SRIIVTTRDRQVLANEFAN-IYEVEPLNFDESLWLFNLNVFKQKHPEIEYYELSKKVVDY 406

Query: 190 AGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDI 249
           A G+P  L++LG  L G+  + W S LE   ++   ++ DI+++S++ L + EKKI +DI
Sbjct: 407 AKGIPFVLKLLGHRLHGKEKEIWESQLEGQNVQT-KKVHDIIKLSYNDLDQDEKKILMDI 465

Query: 250 ACFFKGN--DRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELGQQIV 306
           ACFF G   +   +   L+   +    G+  L +K LI++   N + MHD+++E   QI 
Sbjct: 466 ACFFYGLRLEVKRIKLLLKDHDYSVASGLERLKDKALISISKENMVSMHDIIKETAWQIA 525

Query: 307 QRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMT 366
            ++S E+   + RL+  ++V  VL  + G E +  IV++    +    L  + + F+KM 
Sbjct: 526 PQESIEDPRSQIRLFDPDDVYQVLKYNKGNEAIRSIVVNLLRMKQ---LRLNPQVFTKMN 582

Query: 367 NLRLLKICN-------------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
            L  L   +             L L  GLE L N LR L W  YPL+ LPS    +  +E
Sbjct: 583 KLHFLNFYSVWSSSTFLQDPWGLYLSQGLESLPNELRYLRWTHYPLESLPSKFSAENLVE 642

Query: 414 IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
           +++ YSR+ +LW  +  L  LKV+ L  S ++  +PD + A NLE + L  C  L  +HP
Sbjct: 643 LHLPYSRVKKLWLKVPDLVNLKVLKLHSSAHVKELPDLSTATNLEIIGLRFCVGLTRVHP 702

Query: 474 SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKF 533
           S+    KL  L++  CTSL +L   I M+SL  L+L                   G L+ 
Sbjct: 703 SVFSLKKLEKLDLGGCTSLTSLRSNIHMQSLRYLSLH------------------GCLEL 744

Query: 534 REFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCL 593
           ++F  I    ++L +L+LE T+I+ LPLSI   S L +L L     +E LP ++ +L  L
Sbjct: 745 KDFSVI---SKNLVKLNLELTSIKQLPLSIGSQSMLKMLRLAYTY-IETLPTSIKHLTRL 800

Query: 594 RSLKLSGCSKLKKFPEIVRSMKDL 617
           R L L  C+ L+  PE+  S++ L
Sbjct: 801 RHLDLRYCAGLRTLPELPPSLETL 824



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 137/282 (48%), Gaps = 37/282 (13%)

Query: 602 SKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           S++KK    V  + +L  L L  ++ +KE+P  +   T LE++ L  C  L R+  S+ +
Sbjct: 648 SRVKKLWLKVPDLVNLKVLKLHSSAHVKELPD-LSTATNLEIIGLRFCVGLTRVHPSVFS 706

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK 720
           LK L+ L+L GC  L ++   +  ++SL  L + G                       L+
Sbjct: 707 LKKLEKLDLGGCTSLTSLRSNI-HMQSLRYLSLHG----------------------CLE 743

Query: 721 LPSLSGLC-SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLL 779
           L   S +  +L KLNL   ++ +  LP  IG+   LK L L+     +LPTSI HL++L 
Sbjct: 744 LKDFSVISKNLVKLNLELTSIKQ--LPLSIGSQSMLKMLRLAYTYIETLPTSIKHLTRLR 801

Query: 780 NIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLL-DALKLCKSDSTMIACLDSLKLLGN 838
           +++L  C  L++LP+LPP++  + V  C SL T++  ++   + ++    C  +   L  
Sbjct: 802 HLDLRYCAGLRTLPELPPSLETLDVRECVSLETVMFPSIPQQRKENKKKVCFWNCLQLDE 861

Query: 839 KSLAFSMLREYLEAVSNTRQHLSV--------VVPGSEIPEW 872
            SL    +   +  V    QHLS         V PGS++P+W
Sbjct: 862 YSLMAIEMNAQINMVKFAHQHLSTFRDAQGTYVYPGSDVPQW 903


>gi|22326876|ref|NP_197291.2| protein DA1-related 4 [Arabidopsis thaliana]
 gi|302595926|sp|Q9FKN7.2|DAR4_ARATH RecName: Full=Protein DA1-related 4
 gi|332005099|gb|AED92482.1| protein DA1-related 4 [Arabidopsis thaliana]
          Length = 1613

 Score =  309 bits (792), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 225/669 (33%), Positives = 352/669 (52%), Gaps = 66/669 (9%)

Query: 18  DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLL 77
           D+R IGI GM G+GKTT+A+ V++ +S +++AS F++N  E   K GL  L ++ + ++L
Sbjct: 188 DIRSIGIWGMPGIGKTTLAKAVFNHMSTDYDASCFIENFDEAFHKEGLHRLLKERIGKIL 247

Query: 78  KLADNSIWNVFDGIDMLGSRLQR----------KKVLLVIDDVVDVKQLQSLAGNREWFG 127
           K          D  D+  S + R          K++L+V+DDV D    +S     +WFG
Sbjct: 248 K----------DEFDIESSYIMRPTLHRDKLYDKRILVVLDDVRDSLAAESFLKRLDWFG 297

Query: 128 SGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARII 187
           SGS IIITS D+ +     ++++Y   GLN  EALQLF+   F   +P Q   +LS ++I
Sbjct: 298 SGSLIIITSVDKQVFAFCQINQIYTVQGLNVHEALQLFSQSVFGINEPEQNDRKLSMKVI 357

Query: 188 RYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFL 247
            Y  G PLAL + G  L G+   E  +    L+  PP +I D+L+ ++  L + EK I L
Sbjct: 358 DYVNGNPLALSIYGRELMGKK-SEMETAFFELKHCPPLKIQDVLKNAYSALSDNEKNIVL 416

Query: 248 DIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQ 307
           DIA FFKG   +YV   LE   + P + I VL++KC++T+  NT+ M++L+Q+  Q+I  
Sbjct: 417 DIAFFFKGETVNYVMQLLEESHYFPRLAIDVLVDKCVLTISENTVQMNNLIQDTCQEIFN 476

Query: 308 RQSPEELGKRSRLWKEEEVCHVLT----ESTG-----------TELVEGIVLDNYHHENE 352
                E+   +R+W+   + ++L     E +G            E +E I LD     + 
Sbjct: 477 G----EIETCTRMWEPSRIRYLLEYDELEGSGETKAMPKSGLVAEHIESIFLDT----SN 528

Query: 353 VYLCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
           V       AF  M NL+ LKI N        L  P GL+ L   LRLL W  YPL+ LP 
Sbjct: 529 VKFDVKHDAFKNMFNLKFLKIYNSCSKYISGLNFPKGLDSLPYELRLLHWENYPLQSLPQ 588

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
           +      +++ M YS++ +L   +K L  LK +ILSHS  L+       A N+E + L+G
Sbjct: 589 DFDFGHLVKLSMPYSQLHKLGTRVKDLVMLKRLILSHSLQLVECDILIYAQNIELIDLQG 648

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCL-S 523
           CT L     +  L N L ++N+  CT +    G  +  ++E+L+L+   T I  +    +
Sbjct: 649 CTGLQRFPDTSQLQN-LRVVNLSGCTEIKCFSG--VPPNIEELHLQG--TRIREIPIFNA 703

Query: 524 TLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEI 582
           T      L  ++   ++E+   +  + LE  T +  +  +  ++  LV LN+K C +L  
Sbjct: 704 THPPKVKLDRKKLWNLLENFSDVEHIDLECVTNLATVTSNNHVMGKLVCLNMKYCSNLRG 763

Query: 583 LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL 642
           LP  VS L+ L+ L LSGCS+L+K     R++K   +L++ GT+I+E+P   +L   LE 
Sbjct: 764 LPDMVS-LESLKVLYLSGCSELEKIMGFPRNLK---KLYVGGTAIRELP---QLPNSLEF 816

Query: 643 LNLSDCKNL 651
           LN   CK+L
Sbjct: 817 LNAHGCKHL 825



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 115/265 (43%), Gaps = 84/265 (31%)

Query: 492 LITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHL 551
           L +LP ++ +   E   L+SLP                     +F  +V+     S+LH 
Sbjct: 566 LDSLPYELRLLHWENYPLQSLPQDF------------------DFGHLVKLSMPYSQLHK 607

Query: 552 EGTAIRGLPL--------SIELL--------SGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
            GT ++ L +        S++L+          + L++L+ C  L+  P T S L+ LR 
Sbjct: 608 LGTRVKDLVMLKRLILSHSLQLVECDILIYAQNIELIDLQGCTGLQRFPDT-SQLQNLRV 666

Query: 596 LKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP------------------------ 631
           + LSGC+++K F  +     ++ EL L GT I+E+P                        
Sbjct: 667 VNLSGCTEIKCFSGVP---PNIEELHLQGTRIREIPIFNATHPPKVKLDRKKLWNLLENF 723

Query: 632 ------------------SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCF 673
                             S+  ++ KL  LN+  C NL  LP  +++L+SLK L LSGC 
Sbjct: 724 SDVEHIDLECVTNLATVTSNNHVMGKLVCLNMKYCSNLRGLPD-MVSLESLKVLYLSGCS 782

Query: 674 KLENVPETLGQIESLEELDISGTAV 698
           +LE +   +G   +L++L + GTA+
Sbjct: 783 ELEKI---MGFPRNLKKLYVGGTAI 804



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 108/236 (45%), Gaps = 34/236 (14%)

Query: 602 SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTK-LELLNLSDCKNLVRLPSSIIA 660
           S+L K    V+ +  L  L L   S++ V   I +  + +EL++L  C  L R P +   
Sbjct: 603 SQLHKLGTRVKDLVMLKRLIL-SHSLQLVECDILIYAQNIELIDLQGCTGLQRFPDTS-Q 660

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIP--INLMRKSV- 717
           L++L+ +NLSGC +++      G   ++EEL + GT +     + +  P  + L RK + 
Sbjct: 661 LQNLRVVNLSGCTEIKCFS---GVPPNIEELHLQGTRIREIPIFNATHPPKVKLDRKKLW 717

Query: 718 ----------ALKLPSLSGLCSLRK----------LNLTDCNLMEGALPSDIGNLCSLKE 757
                      + L  ++ L ++            LN+  C+ + G LP D+ +L SLK 
Sbjct: 718 NLLENFSDVEHIDLECVTNLATVTSNNHVMGKLVCLNMKYCSNLRG-LP-DMVSLESLKV 775

Query: 758 LYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL 813
           LYLS  S +     I    + L         ++ LPQLP ++  +  +GC  L ++
Sbjct: 776 LYLSGCSELE---KIMGFPRNLKKLYVGGTAIRELPQLPNSLEFLNAHGCKHLKSI 828


>gi|357499343|ref|XP_003619960.1| Resistance protein [Medicago truncatula]
 gi|355494975|gb|AES76178.1| Resistance protein [Medicago truncatula]
          Length = 1180

 Score =  309 bits (792), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 214/612 (34%), Positives = 340/612 (55%), Gaps = 51/612 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + SR ++++ L+D+ S DV  M+G+ G+GGLGK+T+A+  ++ I+ +FE   FL+NVRE 
Sbjct: 199 LQSRVQQVKSLLDNESDDVVHMVGLYGIGGLGKSTLAKATFNSIADKFEVFCFLENVREN 258

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL +LQ QLL + +   +  +  V  GI ++  RL+RKKVLL++DD+  ++QL +L
Sbjct: 259 SAKHGLENLQEQLLLKTIG-EEIKLGGVSQGIQIIKDRLRRKKVLLILDDIDKLEQLDAL 317

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG+GSR+IIT+RD+ LL  H ++ +Y+  GL   EAL+L    AFK  +     
Sbjct: 318 AGGFDWFGNGSRVIITTRDKQLLTNHEIELMYEVEGLYGTEALELLRWMAFKNNKVPSSY 377

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R + YA GLPL LE++GS L G+S+  W+  L+  E  P  +I +IL++S+D L+
Sbjct: 378 EHILNRAVSYASGLPLVLEIVGSNLFGKSIQIWKGALDGYERIPDKKIQEILRVSYDALE 437

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVI-GIRVLIEKCLITVHNNTLW----- 293
           E ++ +FLDIAC FK +  +   + L     H +   ++VL EK LI + + + W     
Sbjct: 438 EEQQSVFLDIACCFKEHSWEEFEDILRTHYGHCIKHHVQVLAEKSLIVI-SRSKWGYIYV 496

Query: 294 -MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            +HDL++++G+++V++QS +E G+RSRLW   ++ HVL  +TGT  VE + + N+  +  
Sbjct: 497 TLHDLIKDMGKEVVRQQSSKEPGERSRLWCHNDIIHVLQGNTGTSKVEMLYM-NFPSKKT 555

Query: 353 VYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
           V +  + KAF KMTNL+ L I       G EYL + LR+L W  YP   L S++ ++K  
Sbjct: 556 V-IDWNGKAFMKMTNLKTLIIKKGHFSKGPEYLPSSLRVLKWDRYPSDSLSSSI-LNKKF 613

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
           E                    +KV  L   ++L  +PD +  P LEK   + C  L  I 
Sbjct: 614 E-------------------NMKVFSLDKCQHLTHIPDVSCLPILEKFSFKKCRNLITID 654

Query: 473 PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
            S+   +KL ILN ++C+ L + P                P  +  LK    L +SG   
Sbjct: 655 ISIGYLDKLEILNAENCSKLESFP----------------PLRLPSLK---DLKLSGCKS 695

Query: 533 FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKC 592
            + FP+++  M  +  + L  T+I  LP S   L+ L  L +     L+I     +    
Sbjct: 696 LKSFPKLLCEMTKIKGICLYDTSIGELPSSFRNLNELHYLQIFGDGKLKISSNIFAMPNK 755

Query: 593 LRSLKLSGCSKL 604
           + S+  SGC+ L
Sbjct: 756 INSISASGCNLL 767



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 110/243 (45%), Gaps = 26/243 (10%)

Query: 572 LNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI-VRSMKDLSELFLDG-TSIKE 629
            + K CR+L  + +++  L  L  L    CSKL+ FP + + S+KDL    L G  S+K 
Sbjct: 642 FSFKKCRNLITIDISIGYLDKLEILNAENCSKLESFPPLRLPSLKDLK---LSGCKSLKS 698

Query: 630 VPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLE 689
            P  +  +TK++ + L D  ++  LPSS   L  L  L + G  KL+           + 
Sbjct: 699 FPKLLCEMTKIKGICLYDT-SIGELPSSFRNLNELHYLQIFGDGKLKISSNIFAMPNKIN 757

Query: 690 ELDISGTAVPHSTSWYSYIPINLMRKSVALKLPS--LSGLCSLRKLNLTDCNLMEGALPS 747
            +  SG               NL+      K+ S   S +  LR  N    NL +G LP 
Sbjct: 758 SISASGC--------------NLLLPKDNDKMNSEMFSNVKCLRLSN----NLSDGCLPI 799

Query: 748 DIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGC 807
            +    ++  L LS N F  +P  ++ L  ++++ L+ C+ L+ +  +PPN+      GC
Sbjct: 800 FLKWCVNVTSLDLSGNKFKIIPECLSELHLIVDLSLDFCEYLEEIRGIPPNLYNFSAIGC 859

Query: 808 ASL 810
            SL
Sbjct: 860 ESL 862


>gi|357486935|ref|XP_003613755.1| Disease resistance-like protein [Medicago truncatula]
 gi|355515090|gb|AES96713.1| Disease resistance-like protein [Medicago truncatula]
          Length = 790

 Score =  309 bits (792), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 232/683 (33%), Positives = 354/683 (51%), Gaps = 64/683 (9%)

Query: 21  MIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLA 80
           M+GI GMGG GKTT+A  VY+ I+ +F++  FL ++RE S K GLV LQ+ LL +L    
Sbjct: 1   MVGIYGMGGSGKTTLACAVYNCIADQFDSFCFLGDIRENSLKCGLVQLQKMLLFELTGKN 60

Query: 81  DNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEH 140
           D    ++   I ++ SRL+ KKVLL++DDV  ++QL++LAG+                  
Sbjct: 61  DIKFCSLNKAIPIIESRLRGKKVLLILDDVDSLEQLKALAGD------------ICCMFM 108

Query: 141 LLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVL 200
           +LK   V+E      L+  E L+LF   AFKT +  +    +S R + Y+ GLPLA+E++
Sbjct: 109 VLKESEVEE------LSRAEVLELFRWDAFKTNEMDRSYEDISKRAVLYSNGLPLAVEII 162

Query: 201 GSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDY 260
            S L G+++ EW+S L+  E  P   I +IL++S+ GL+E  K+IFLDIACFFKG     
Sbjct: 163 VSDLYGKTILEWKSALDTYEKIPYENIQEILRVSYHGLKEFVKEIFLDIACFFKGYRLSD 222

Query: 261 VTNFL-EGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSR 319
           + N L  G  F P   I+VL++K LI + +  + +HD+++++G++IV+ +SP + G+RSR
Sbjct: 223 ILNILCSGRDFDPDYAIQVLVDKSLIKIDDRHVRLHDMIEDMGREIVRLESPAKPGERSR 282

Query: 320 LWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLP 379
           LW  +++ +V  E+ G++  E I+L   H   +  +     A  KM NL++L I   +  
Sbjct: 283 LWFYKDILNVFKENKGSDKTEIIML---HLVKDKEVQWDGNALKKMENLKILVIEKARFS 339

Query: 380 NGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMIL 439
            G  +L   LR+L WR YP   LP +    K + + +  S I        +   + V ++
Sbjct: 340 IGPNHLPKSLRVLKWRDYPESSLPVHFDPKKLVILDLSMSCI------TFNNQVIIVSMV 393

Query: 440 SHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI 499
           S   ++  +PD +GA NL+KL L+    L E+H S+    KL  LN+  CTSL  LP  I
Sbjct: 394 SKYVDIYLVPDMSGAQNLKKLHLDSFKNLVEVHDSVGFLGKLEDLNLNRCTSLRVLPHGI 453

Query: 500 LMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGL 559
            + SL+         T+S   C S          + FPEI+  ME+ + L L  T I  L
Sbjct: 454 NLPSLK---------TMSFRNCAS---------LKSFPEILGKMENTTYLGLSDTGISEL 495

Query: 560 PLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSE 619
           P SI LL GL  L +  C+ L  LP ++  L  L +L+   C  L +   I +    + E
Sbjct: 496 PFSIGLLEGLATLTIDRCKELLELPSSIFMLPKLETLEAYSCKDLAR---IKKCKGQVHE 552

Query: 620 LFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVR-----------LPSSIIALKSLKTLN 668
               G     V  +   L+   L  L  C + VR           LPS I    SLK L 
Sbjct: 553 TMYSGAK-SVVDFNFCHLSDEFLATLLPCLHYVRNLSLDYIIITILPSCINECHSLKELT 611

Query: 669 LSGCFKLENV---PETLGQIESL 688
            + C +L  +   P  +  I ++
Sbjct: 612 FNNCMELREIRGLPPNIKHISAI 634



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 120/270 (44%), Gaps = 38/270 (14%)

Query: 544 EHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
           ++L +LHL+    +  +  S+  L  L  LNL  C SL +LP  + NL  L+++    C+
Sbjct: 409 QNLKKLHLDSFKNLVEVHDSVGFLGKLEDLNLNRCTSLRVLPHGI-NLPSLKTMSFRNCA 467

Query: 603 KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
            LK FPEI+  M++ + L L  T I E+P SI LL  L  L +  CK L+ LPSSI  L 
Sbjct: 468 SLKSFPEILGKMENTTYLGLSDTGISELPFSIGLLEGLATLTIDRCKELLELPSSIFMLP 527

Query: 663 SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
            L+TL    C  L  + +  GQ+              H T +                  
Sbjct: 528 KLETLEAYSCKDLARIKKCKGQV--------------HETMY------------------ 555

Query: 723 SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIE 782
             SG  S+   N   C+L +  L + +  L  ++ L L       LP+ I     L  + 
Sbjct: 556 --SGAKSVVDFNF--CHLSDEFLATLLPCLHYVRNLSLDYIIITILPSCINECHSLKELT 611

Query: 783 LEDCKRLQSLPQLPPNIRQVRVNGCASLVT 812
             +C  L+ +  LPPNI+ +    C SL +
Sbjct: 612 FNNCMELREIRGLPPNIKHISAINCTSLTS 641


>gi|84313510|gb|ABC55465.1| TIR-NBS disease resistance-like protein [(Populus tomentosa x P.
           bolleana) x P. tomentosa var. truncata]
 gi|84313512|gb|ABC55466.1| TIR-NBS disease resistance-like protein [(Populus tomentosa x P.
           bolleana) x P. tomentosa var. truncata]
          Length = 642

 Score =  309 bits (792), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 175/437 (40%), Positives = 267/437 (61%), Gaps = 17/437 (3%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD     +   + + + DVR++GI GM G+GKTT+A+VV++ + + FE S FL ++ E S
Sbjct: 195 MDPLAHDIYDFLSTATDDVRIVGIHGMSGIGKTTLAKVVFNQLCNGFEGSCFLSDINETS 254

Query: 61  SK-GGLVSLQRQLLSQLLKLADNSIWNVFDGID----MLGSRLQRKKVLLVIDDVVDVKQ 115
            +  GL  LQ+QLL  +LK     + N FD +D    ++  R++RK+VL+V DDV   +Q
Sbjct: 255 KQFNGLAGLQKQLLRDILK---QDVAN-FDCVDRGKVLIKERIRRKRVLVVADDVAHPEQ 310

Query: 116 LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP 175
           L +L G R WFG GSR+IIT+RD  +L     D+ Y+   L   E+LQLF   A +  +P
Sbjct: 311 LNALMGERSWFGPGSRVIITTRDSSVLLK--ADQTYQIEELKPYESLQLFRWHALRDTKP 368

Query: 176 LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
            ++ ++LS   + Y GG+PLALEV+G+ LSG++ D W+S +++L   P  +I   L+ISF
Sbjct: 369 TEDYIELSKDAVDYCGGIPLALEVMGACLSGKNRDGWKSVIDKLRRIPNRDIQGKLRISF 428

Query: 236 DGLQELE-KKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHN-NTL 292
           D L   E +  FLDIACFF    ++YV   L   CG++P + +  L E+ LI V+    +
Sbjct: 429 DALDGEELQNAFLDIACFFIDRKKEYVAKVLGARCGYNPEVDLETLRERSLIKVNGFGKI 488

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            MHDLL+++G++IV+  SP+E GKR+R+W +E+  +VL +  GT++VEG+ LD    E +
Sbjct: 489 TMHDLLRDMGREIVRESSPKEPGKRTRIWNQEDAWNVLEQQKGTDVVEGLTLDVRASEAK 548

Query: 353 VYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
                S ++F+KM  L LL+I  + L    + LS  L  + W   PLK+LPS+  +D  +
Sbjct: 549 ---SLSTRSFAKMKCLNLLQINGVHLTGSFKLLSKELMWICWLQCPLKYLPSDFILDNLV 605

Query: 413 EIYMCYSRIGELWKGIK 429
            +   YS + ELWKG K
Sbjct: 606 VLDTQYSNLKELWKGEK 622


>gi|10177890|dbj|BAB11222.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1251

 Score =  309 bits (792), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 225/669 (33%), Positives = 352/669 (52%), Gaps = 66/669 (9%)

Query: 18  DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLL 77
           D+R IGI GM G+GKTT+A+ V++ +S +++AS F++N  E   K GL  L ++ + ++L
Sbjct: 201 DIRSIGIWGMPGIGKTTLAKAVFNHMSTDYDASCFIENFDEAFHKEGLHRLLKERIGKIL 260

Query: 78  KLADNSIWNVFDGIDMLGSRLQR----------KKVLLVIDDVVDVKQLQSLAGNREWFG 127
           K          D  D+  S + R          K++L+V+DDV D    +S     +WFG
Sbjct: 261 K----------DEFDIESSYIMRPTLHRDKLYDKRILVVLDDVRDSLAAESFLKRLDWFG 310

Query: 128 SGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARII 187
           SGS IIITS D+ +     ++++Y   GLN  EALQLF+   F   +P Q   +LS ++I
Sbjct: 311 SGSLIIITSVDKQVFAFCQINQIYTVQGLNVHEALQLFSQSVFGINEPEQNDRKLSMKVI 370

Query: 188 RYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFL 247
            Y  G PLAL + G  L G+   E  +    L+  PP +I D+L+ ++  L + EK I L
Sbjct: 371 DYVNGNPLALSIYGRELMGKK-SEMETAFFELKHCPPLKIQDVLKNAYSALSDNEKNIVL 429

Query: 248 DIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQ 307
           DIA FFKG   +YV   LE   + P + I VL++KC++T+  NT+ M++L+Q+  Q+I  
Sbjct: 430 DIAFFFKGETVNYVMQLLEESHYFPRLAIDVLVDKCVLTISENTVQMNNLIQDTCQEIFN 489

Query: 308 RQSPEELGKRSRLWKEEEVCHVLT----ESTG-----------TELVEGIVLDNYHHENE 352
                E+   +R+W+   + ++L     E +G            E +E I LD     + 
Sbjct: 490 G----EIETCTRMWEPSRIRYLLEYDELEGSGETKAMPKSGLVAEHIESIFLDT----SN 541

Query: 353 VYLCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
           V       AF  M NL+ LKI N        L  P GL+ L   LRLL W  YPL+ LP 
Sbjct: 542 VKFDVKHDAFKNMFNLKFLKIYNSCSKYISGLNFPKGLDSLPYELRLLHWENYPLQSLPQ 601

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
           +      +++ M YS++ +L   +K L  LK +ILSHS  L+       A N+E + L+G
Sbjct: 602 DFDFGHLVKLSMPYSQLHKLGTRVKDLVMLKRLILSHSLQLVECDILIYAQNIELIDLQG 661

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCL-S 523
           CT L     +  L N L ++N+  CT +    G  +  ++E+L+L+   T I  +    +
Sbjct: 662 CTGLQRFPDTSQLQN-LRVVNLSGCTEIKCFSG--VPPNIEELHLQG--TRIREIPIFNA 716

Query: 524 TLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEI 582
           T      L  ++   ++E+   +  + LE  T +  +  +  ++  LV LN+K C +L  
Sbjct: 717 THPPKVKLDRKKLWNLLENFSDVEHIDLECVTNLATVTSNNHVMGKLVCLNMKYCSNLRG 776

Query: 583 LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL 642
           LP  VS L+ L+ L LSGCS+L+K     R++K   +L++ GT+I+E+P   +L   LE 
Sbjct: 777 LPDMVS-LESLKVLYLSGCSELEKIMGFPRNLK---KLYVGGTAIRELP---QLPNSLEF 829

Query: 643 LNLSDCKNL 651
           LN   CK+L
Sbjct: 830 LNAHGCKHL 838



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 66/222 (29%)

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPL--------SIELL--------SGLVLLNLKNCR 578
           +F  +V+     S+LH  GT ++ L +        S++L+          + L++L+ C 
Sbjct: 604 DFGHLVKLSMPYSQLHKLGTRVKDLVMLKRLILSHSLQLVECDILIYAQNIELIDLQGCT 663

Query: 579 SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP------- 631
            L+  P T S L+ LR + LSGC+++K F  +     ++ EL L GT I+E+P       
Sbjct: 664 GLQRFPDT-SQLQNLRVVNLSGCTEIKCFSGVP---PNIEELHLQGTRIREIPIFNATHP 719

Query: 632 -----------------------------------SSIELLTKLELLNLSDCKNLVRLPS 656
                                              S+  ++ KL  LN+  C NL  LP 
Sbjct: 720 PKVKLDRKKLWNLLENFSDVEHIDLECVTNLATVTSNNHVMGKLVCLNMKYCSNLRGLPD 779

Query: 657 SIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
            +++L+SLK L LSGC +LE +   +G   +L++L + GTA+
Sbjct: 780 -MVSLESLKVLYLSGCSELEKI---MGFPRNLKKLYVGGTAI 817



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 32/197 (16%)

Query: 640 LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP 699
           +EL++L  C  L R P +   L++L+ +NLSGC +++      G   ++EEL + GT + 
Sbjct: 654 IELIDLQGCTGLQRFPDTS-QLQNLRVVNLSGCTEIKCFS---GVPPNIEELHLQGTRIR 709

Query: 700 HSTSWYSYIP--INLMRKSV-----------ALKLPSLSGLCSLRK----------LNLT 736
               + +  P  + L RK +            + L  ++ L ++            LN+ 
Sbjct: 710 EIPIFNATHPPKVKLDRKKLWNLLENFSDVEHIDLECVTNLATVTSNNHVMGKLVCLNMK 769

Query: 737 DCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP 796
            C+ + G LP D+ +L SLK LYLS  S +     I    + L         ++ LPQLP
Sbjct: 770 YCSNLRG-LP-DMVSLESLKVLYLSGCSELE---KIMGFPRNLKKLYVGGTAIRELPQLP 824

Query: 797 PNIRQVRVNGCASLVTL 813
            ++  +  +GC  L ++
Sbjct: 825 NSLEFLNAHGCKHLKSI 841


>gi|9965107|gb|AAG09953.1|AF175398_1 resistance protein MG63 [Glycine max]
          Length = 459

 Score =  309 bits (791), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 178/416 (42%), Positives = 264/416 (63%), Gaps = 19/416 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR ++++ L+D GS DV  M+GI G+GG+GKTT+A  +Y+ I+  FEA  FL+NVRE 
Sbjct: 18  LESRIQEVKMLLDVGSDDVVHMVGIHGLGGIGKTTLAAAIYNSIADHFEALCFLENVRET 77

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S   GL  LQR LLS+   + ++ +  V  GI ++  RLQ+KKVLL++DDV   +QLQ+L
Sbjct: 78  SKTHGLQYLQRNLLSE--TVGEDELIGVKQGISIIQHRLQQKKVLLILDDVDKREQLQAL 135

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G  + F  GSR+IIT+RD+ LL  HGV   Y+ + LN + ALQL + KAFK  + +  C
Sbjct: 136 VGRPDLFCPGSRVIITTRDKQLLACHGVKRTYEVNELNEEYALQLLSWKAFK-LEKVNPC 194

Query: 180 VQ-LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
            + +  R + Y+ GLPLALEV+GS LSGR++++WRSTL+R +  P  EI +IL++S+D L
Sbjct: 195 YKDVLNRTVTYSAGLPLALEVIGSNLSGRNIEQWRSTLDRYKRIPNKEIQEILKVSYDAL 254

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEG----CGFHPVIGIRVLIEKCLITVHNNTLWM 294
           +E E+ +FLDI+C  K  D   V + L      C  H    IRVL+EK LI + +  + +
Sbjct: 255 EEDEQSVFLDISCCLKEYDLKEVQDILRAHYGHCMEH---HIRVLLEKSLIKISDGYITL 311

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           HDL++++G++IV+++SP E GKRSRLW   ++        GT  +E I+  ++    EV 
Sbjct: 312 HDLIEDMGKEIVRKESPREPGKRSRLWLHTDIIQ------GTSQIE-IICTDFSLFEEVE 364

Query: 355 LCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK 410
           +   A AF KM NL+ L I N     G ++L + LR+L W  YP +  PS+ +  K
Sbjct: 365 IEWDANAFKKMENLKTLIIKNGHFTKGPKHLPDTLRVLEWWRYPSQSFPSDFRPKK 420


>gi|297791243|ref|XP_002863506.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309341|gb|EFH39765.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1168

 Score =  309 bits (791), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 245/720 (34%), Positives = 368/720 (51%), Gaps = 89/720 (12%)

Query: 12  MDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQ 71
           +D   ++ R++ + GM G+GKT +A+ +   +  +     F+    E S   GL  +Q+ 
Sbjct: 234 VDCNDNETRIVAVVGMPGIGKTYLAKKLLAKLETKIVRHVFIQFDSERSKYQGLEWVQKT 293

Query: 72  LLSQLLK----LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFG 127
           ++  LLK     + +   NV +       +L+ KK+++V D+V D KQ++ L  N +W  
Sbjct: 294 IVEDLLKKDYPTSGSEGGNVLEN---WKEQLREKKIVVVFDNVTDQKQIEPLK-NCDWIK 349

Query: 128 SGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARII 187
            GSRI+IT+RD+ L +T   D +Y+  GLN  ++L+ F  +     +     ++LS +I+
Sbjct: 350 KGSRIVITTRDKSLTETLPCD-LYEVPGLNDKDSLEFFRSQICSNLE--GNFMELSRKIV 406

Query: 188 RYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD-GLQELEKKIF 246
            +AGG PLALE  G  L  +S D W   L  L      E+ ++L+  F+  L E +++ F
Sbjct: 407 DFAGGNPLALEAFGKELKKKSEDCWEKRLGTLTRVSSEEMREVLRNIFEKDLDEKQREAF 466

Query: 247 LDIACFFKGNDRDYVTNFLEGCGFHPVIG----IRVLIEKCLITVHNNTLWMHDLLQELG 302
           LDI CFF+ +D  YVT+ L+             +R L++K LI + N  + +HD+L  +G
Sbjct: 467 LDIVCFFRSHDESYVTSLLDSVDPKSAEAGREEVRDLVDKFLIHISNGRVEIHDILFTMG 526

Query: 303 QQIVQRQSPEELGKRSRLWKEEEV-CHVLTESTGTELVEGIVLDNYHHENEVYLCASAKA 361
           +++V     E   K   L     V    L +  G + V GIV+D    E    +    + 
Sbjct: 527 KELV-----ETTNKYWMLSSNSAVSADALRKKRGRDQVRGIVIDMSKMEE---MPLDNQT 578

Query: 362 FSKMTNLRLLKI------------CNLQLPNGLEYLSNRL-RLLGWRGYPLKFLPSNLQM 408
           F  M++LR LK+            C L LP+ LE+  N + R L W  +P K LPS  + 
Sbjct: 579 FVGMSSLRYLKVYNSLCPRHCEARCKLNLPDELEFPKNNIIRYLDWMNFPGKELPSEFEP 638

Query: 409 DKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
              I++ + YS+I  LW  +K   KLK + LSHS  L  + + + APNL +L LEGCT L
Sbjct: 639 KDLIDLRLPYSKIISLWNRVKDTPKLKWVDLSHSSKLSSLSELSEAPNLLRLNLEGCTSL 698

Query: 469 YEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVS 528
            E+  ++     L+ LN++ CTSL++LP KI M SL+                  TL +S
Sbjct: 699 KELPEAMQKMKNLVFLNLRGCTSLLSLP-KITMDSLK------------------TLILS 739

Query: 529 GDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS 588
              +F+ F  I EH+E    L+L GTAI GLP +I  L  L+LLNL +C++L  LP  + 
Sbjct: 740 DCSQFQTFEVISEHLE---TLYLNGTAINGLPSAIGNLDRLILLNLIDCKNLVTLPDCLG 796

Query: 589 NLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIE------------- 635
            LK L+ LKLS CSKLK FP++   M+ L  L LDGTSI E+P SI              
Sbjct: 797 KLKSLQELKLSRCSKLKPFPDVTAKMESLRVLLLDGTSIAEMPGSIYDLSLLRRLCLSRN 856

Query: 636 -----------LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV--PETL 682
                       +  L+ L L  CKNL+ LP   I   +L+ LN  GC  L  V  P+TL
Sbjct: 857 DDIHTLRFDMGQMFHLKWLELKYCKNLISLP---ILPPNLQCLNAHGCTSLRTVASPQTL 913



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 145/490 (29%), Positives = 229/490 (46%), Gaps = 87/490 (17%)

Query: 545  HLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILP-VTVSNLKCLRSLKLSGCS 602
            +L  L+LEG T+++ LP +++ +  LV LNL+ C SL  LP +T+ +LK   +L LS CS
Sbjct: 686  NLLRLNLEGCTSLKELPEAMQKMKNLVFLNLRGCTSLLSLPKITMDSLK---TLILSDCS 742

Query: 603  KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
            + + F E++   + L  L+L+GT+I  +PS+I  L +L LLNL DCKNLV LP  +  LK
Sbjct: 743  QFQTF-EVIS--EHLETLYLNGTAINGLPSAIGNLDRLILLNLIDCKNLVTLPDCLGKLK 799

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
            SL+ L LS C KL+  P+   ++ESL  L + GT++                        
Sbjct: 800  SLQELKLSRCSKLKPFPDVTAKMESLRVLLLDGTSI------------------------ 835

Query: 723  SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFV-SLPTSITHLSKLLNI 781
                                  +P  I +L  L+ L LS+N  + +L   +  +  L  +
Sbjct: 836  --------------------AEMPGSIYDLSLLRRLCLSRNDDIHTLRFDMGQMFHLKWL 875

Query: 782  ELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSD----STMI--ACLDSLKL 835
            EL+ CK L SLP LPPN++ +  +GC SL T+     L        ST I   C +  ++
Sbjct: 876  ELKYCKNLISLPILPPNLQCLNAHGCTSLRTVASPQTLPTPTEQIHSTFIFTNCYELEQV 935

Query: 836  LGNKSLAFSMLREYLEAVSNTRQH------LSVVVPGSEIPEWFMYQNEGSSITVTRPSN 889
              N  +++   +  L +     Q       +    PG +IP WF +Q  GS +T+  P +
Sbjct: 936  SKNAIISYVQKKSKLMSADRYNQDFVFKSLIGTCFPGYDIPAWFNHQALGSVLTLKLPQH 995

Query: 890  LYNKKKLVGYAICCV-----FHVLKNSRGNNCFGSYPTHQLN--CHIGHGIYGIGFRDKF 942
             +N  +L+G A+C V     +    NS    C   +    L+    I  G    G  D+ 
Sbjct: 996  -WNAGRLIGIALCVVVSFNGYKDQSNSLQVKCTCEFTNVSLSPESFIVGGFSEPG--DET 1052

Query: 943  GQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQG----LEVKMCGL 998
                +DH+++       CY   L ++ + +   +  V++ F+   G       +V  CG 
Sbjct: 1053 HTFEADHIFI-------CYTTLLNIKKHQQFPSATEVSLGFQVTNGTSEVAKCKVMKCGF 1105

Query: 999  HPVYM-DEVE 1007
              VY  DEVE
Sbjct: 1106 SLVYEPDEVE 1115


>gi|297740948|emb|CBI31260.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score =  308 bits (790), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 220/610 (36%), Positives = 321/610 (52%), Gaps = 89/610 (14%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M+ R +KL  L++     V MIGI G+ G+GKTTIA+ +Y+ IS+ F+++ FL NV E +
Sbjct: 192 MEFRLKKLLSLINLKLDKVLMIGINGISGIGKTTIAKAIYNKISYHFQSTIFLTNVGE-N 250

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           S+G  ++L      Q  +L D++    +        R + K+VLLV+DDV  + Q++ L 
Sbjct: 251 SRGHHLNL-----PQFQQLLDDASIGTY-------GRTKNKRVLLVVDDVDRLSQVEYLV 298

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
             R+ F   SRII T+RD HLL    +D  Y+  GL ++EA+ LF+  AFK   P ++ V
Sbjct: 299 KLRDSFSLRSRIIFTTRDRHLLNVAKLDASYESKGLTHEEAIHLFSWHAFKQTFPKEDYV 358

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            L   ++ Y  G PLAL+VLGS L G+++ EW+  L +L      EI + L++SFDGL  
Sbjct: 359 GLVNHVVGYVKGHPLALKVLGSSLFGKTITEWKCILHKLRKNTHGEIYNELKVSFDGLTP 418

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            E++IFL + C  KG D + V+  L+  G     GI+VL + CL T+ NN L+MHDLLQ+
Sbjct: 419 TEQEIFLKVVCLLKGKDEESVSTILDSLGLGSESGIQVLHDMCLATISNNKLYMHDLLQQ 478

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD--------------- 345
           +GQ+++   +P E  KRSRL   ++V   LT +TGTE ++ I                  
Sbjct: 479 MGQKLIDENNPHEPSKRSRLQDSKDVYPRLTRNTGTEEIQKIQFSSAGFLKMPKLYSLMH 538

Query: 346 --------NYHHENEVYLCASAKAFSKMTNLRLL---KICNLQLPNGLEYLSNRLRLLGW 394
                   N+  ++ ++L  S       +N+R L   +   L    G E +    +LL  
Sbjct: 539 LPLKSLPPNFPGDSLIFLDWSR------SNIRQLWKDEYPRLTRNTGTEAIQ---KLLSP 589

Query: 395 RGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGA 454
              PLK LP N   D  I + +  S I +LWKG K L  LKVM LS+ +NL+++  F   
Sbjct: 590 MHLPLKSLPPNFPGDSLILLDLSRSNIRQLWKGNKSLGNLKVMNLSYCQNLVKISKFPSM 649

Query: 455 PNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPT 514
           P L+ L L+GC +                                         L+SLP+
Sbjct: 650 PALKILRLKGCKK-----------------------------------------LRSLPS 668

Query: 515 TISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL 574
           +I  LKCL  L  SG      FPEI E ME+L ELHL+ TAI+ LP SI  L+ L  LNL
Sbjct: 669 SICELKCLECLWCSGCSNLEAFPEITEKMENLKELHLDETAIKELPSSIYHLTALEFLNL 728

Query: 575 KNCRSLEILP 584
           ++C++L  LP
Sbjct: 729 EHCKNLVSLP 738



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 105/233 (45%), Gaps = 49/233 (21%)

Query: 620 LFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVP 679
           L L  ++I+++    + L  L+++NLS C+NLV++ S   ++ +LK L L GC KL ++P
Sbjct: 609 LDLSRSNIRQLWKGNKSLGNLKVMNLSYCQNLVKI-SKFPSMPALKILRLKGCKKLRSLP 667

Query: 680 ETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCN 739
            ++ +++ LE L  SG                                          C+
Sbjct: 668 SSICELKCLECLWCSG------------------------------------------CS 685

Query: 740 LMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
            +E A P     + +LKEL+L + +   LP+SI HL+ L  + LE CK L SLP      
Sbjct: 686 NLE-AFPEITEKMENLKELHLDETAIKELPSSIYHLTALEFLNLEHCKNLVSLPSASIKY 744

Query: 800 RQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLA----FSMLRE 848
           R  R      L     ++ +   ++ M  C+  ++ +GN  +     F++ RE
Sbjct: 745 RVCRCTPLHLLEDFAVSIIVAMEEADMAFCVQLIQ-MGNSGVGIEELFALSRE 796



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 93/208 (44%), Gaps = 44/208 (21%)

Query: 503 SLEKLNLKSLPTTISGLKCLSTLDVSG----DLKFREFPEIVEH------MEHLSELHLE 552
           SL  L LKSLP    G   L  LD S      L   E+P +  +       + LS +HL 
Sbjct: 535 SLMHLPLKSLPPNFPG-DSLIFLDWSRSNIRQLWKDEYPRLTRNTGTEAIQKLLSPMHL- 592

Query: 553 GTAIRGLPLSIELLSGLVLLNLK--NCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI 610
              ++ LP +    S L+LL+L   N R L     ++ NLK +    LS C  L K    
Sbjct: 593 --PLKSLPPNFPGDS-LILLDLSRSNIRQLWKGNKSLGNLKVM---NLSYCQNLVK---- 642

Query: 611 VRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLS 670
                           I + PS    +  L++L L  CK L  LPSSI  LK L+ L  S
Sbjct: 643 ----------------ISKFPS----MPALKILRLKGCKKLRSLPSSICELKCLECLWCS 682

Query: 671 GCFKLENVPETLGQIESLEELDISGTAV 698
           GC  LE  PE   ++E+L+EL +  TA+
Sbjct: 683 GCSNLEAFPEITEKMENLKELHLDETAI 710


>gi|15242937|ref|NP_197661.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10178243|dbj|BAB11675.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332005681|gb|AED93064.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1008

 Score =  308 bits (790), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 219/633 (34%), Positives = 330/633 (52%), Gaps = 53/633 (8%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV-----REISSKGGL------VS 67
           VRM GI G  G+GKTTIAR ++  IS  F+ S FLD        EI S G +      + 
Sbjct: 205 VRMFGIWGPSGIGKTTIARALFSRISRHFQGSVFLDRAFVSKSMEIYSGGNVDNYNAKLH 264

Query: 68  LQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFG 127
           LQ + LS++L+  D  I N    + ++G RL+  KVL+ IDD+ D   L +LA    WFG
Sbjct: 265 LQGKFLSEILRAKDIKISN----LGVVGERLKHMKVLIFIDDLDDQVVLDALASKPHWFG 320

Query: 128 SGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDE-ALQLFNMKAFKTYQPLQECVQLSARI 186
            GSRII+ ++D+   + HG+   Y+  GL  D+ AL++F+  AF+   P     +L++ +
Sbjct: 321 CGSRIIVITKDKQFFRAHGIGLFYEV-GLPSDKLALEMFSQSAFRQNSPPPGFTELASEV 379

Query: 187 IRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL-QELEKKI 245
            + +G LPLAL VLGS L GR  ++W   L RL      +I  IL++ +D L  + +K I
Sbjct: 380 SKRSGNLPLALNVLGSHLRGRDKEDWIDMLPRLRKGLDGKIEKILRVGYDELSNKDDKAI 439

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQI 305
           F  IAC F G +  Y+   L        IG++ L++K LI +  +T+ MH +LQE+G++I
Sbjct: 440 FRLIACLFNGAEISYIKLLLADSNLGVTIGLKNLVDKSLIRIGCDTVEMHSMLQEMGREI 499

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKM 365
           V+ QS  E G+R  L    ++  VL ++TGT+ V GI  D    E    L    +AF +M
Sbjct: 500 VREQSIYEPGEREFLVDSTDILDVLNDNTGTKKVLGISFDMSEIEE---LHIHKRAFKRM 556

Query: 366 TNLRLLKI----------CNLQLPNGLE-YLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
            NLR L+             L L  G + +   +L+LL W  YP++ +PSN      + +
Sbjct: 557 PNLRFLRFYKKLGKQSKEARLHLQEGFDKFFPPKLKLLSWDDYPMRRMPSNFHAGYLVVL 616

Query: 415 YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
            M +S++ +LW+G++ L  L+ M L  S+ L  +PD + A NLE L L  C+ L E+  S
Sbjct: 617 RMQHSKLEKLWQGVQPLTCLREMQLWGSKKLKEIPDLSLATNLETLYLNDCSSLVELPSS 676

Query: 475 LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFR 534
           +   NKL  L MK C  L  LP  I +KSL +L+L          +C          + +
Sbjct: 677 IKNLNKLWDLGMKGCEKLELLPTDINLKSLYRLDLG---------RC---------SRLK 718

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
            FP+I     ++SEL+L  TAI  +P  I+  S L  L ++ C+ L+ +   +S LK L 
Sbjct: 719 SFPDI---SSNISELYLNRTAIEEVPWWIQKFSRLKRLRMRECKKLKCISPNISKLKHLE 775

Query: 595 SLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSI 627
            L  S C    +   +V+    L  L   G  +
Sbjct: 776 MLDFSNCIATTEEEALVQQQSVLKYLIFPGGQV 808



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 123/231 (53%), Gaps = 11/231 (4%)

Query: 497 GKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHL-EGTA 555
           G +++  ++   L+ L   +  L CL  + + G  K +E P++     +L  L+L + ++
Sbjct: 611 GYLVVLRMQHSKLEKLWQGVQPLTCLREMQLWGSKKLKEIPDL-SLATNLETLYLNDCSS 669

Query: 556 IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMK 615
           +  LP SI+ L+ L  L +K C  LE+LP  + NLK L  L L  CS+LK FP+I     
Sbjct: 670 LVELPSSIKNLNKLWDLGMKGCEKLELLPTDI-NLKSLYRLDLGRCSRLKSFPDIS---S 725

Query: 616 DLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
           ++SEL+L+ T+I+EVP  I+  ++L+ L + +CK L  +  +I  LK L+ L+ S C   
Sbjct: 726 NISELYLNRTAIEEVPWWIQKFSRLKRLRMRECKKLKCISPNISKLKHLEMLDFSNCIAT 785

Query: 676 ENVPETLGQIESLEELDISGTAVP-----HSTSWYSYIPINLMRKSVALKL 721
                 + Q   L+ L   G  VP      +T     IP++L + S++ +L
Sbjct: 786 TEEEALVQQQSVLKYLIFPGGQVPLYFTYQATGSSLAIPLSLHQSSLSQQL 836



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 165/394 (41%), Gaps = 126/394 (31%)

Query: 530 DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSG----------------LVLLN 573
           +L+F  F + +      + LHL+    +  P  ++LLS                 LV+L 
Sbjct: 558 NLRFLRFYKKLGKQSKEARLHLQEGFDKFFPPKLKLLSWDDYPMRRMPSNFHAGYLVVLR 617

Query: 574 LKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSS 633
           +++ + LE L   V  L CLR ++L G  KLK+ P       DLS               
Sbjct: 618 MQHSK-LEKLWQGVQPLTCLREMQLWGSKKLKEIP-------DLS--------------- 654

Query: 634 IELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDI 693
             L T LE L L+DC +LV LPSSI  L  L  L + GC KLE +P  +           
Sbjct: 655 --LATNLETLYLNDCSSLVELPSSIKNLNKLWDLGMKGCEKLELLPTDI----------- 701

Query: 694 SGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLC 753
                                            L SL +L+L  C+ ++ + P DI +  
Sbjct: 702 --------------------------------NLKSLYRLDLGRCSRLK-SFP-DISS-- 725

Query: 754 SLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL 813
           ++ ELYL++ +   +P  I   S+L  + + +CK+L+    + PNI +++       + +
Sbjct: 726 NISELYLNRTAIEEVPWWIQKFSRLKRLRMRECKKLKC---ISPNISKLK------HLEM 776

Query: 814 LDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWF 873
           LD        S  IA  +   L+  +S+      +YL            + PG ++P +F
Sbjct: 777 LDF-------SNCIATTEEEALVQQQSVL-----KYL------------IFPGGQVPLYF 812

Query: 874 MYQNEGSSITVTRPSNLYN---KKKLVGYAICCV 904
            YQ  GSS+ +  P +L+     ++L+G+  C V
Sbjct: 813 TYQATGSSLAI--PLSLHQSSLSQQLLGFRACVV 844


>gi|15242300|ref|NP_199319.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758979|dbj|BAB09489.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007813|gb|AED95196.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1165

 Score =  308 bits (789), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 256/774 (33%), Positives = 377/774 (48%), Gaps = 100/774 (12%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EKL  +   G+   R+IG+ GM G+GKTT+ + +Y     +F     +D +R  S+   L
Sbjct: 219 EKLDLVKYKGT---RVIGVVGMPGIGKTTLVKELYKTWQGKFSRYALIDQIRGKSNNFRL 275

Query: 66  VSLQRQLLSQLLKLADN-SIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGN-- 122
             L   LL +LL   +N  + ++ +        L+ +KVL+V+DDV   +Q+ +L G   
Sbjct: 276 ECLPTLLLEKLLPELNNPQLDSIEEPYKTHKGLLRERKVLVVLDDVSRREQIYALLGKYD 335

Query: 123 ----REWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ---P 175
                EW   GSRIII + D   LK   V + Y    LN+ + LQLF   AF   Q   P
Sbjct: 336 LHSKHEWIKDGSRIIIATNDISSLKGL-VHDTYVVRQLNHRDGLQLFRYHAFHYDQATPP 394

Query: 176 LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
             + ++LS   + YA G PLAL++LG  L  +++  W + L  L   P + I +++Q+S+
Sbjct: 395 KVDFMKLSDEFVHYARGHPLALKILGRELYEKNMKHWETKLIILAQSPTTYIGEVVQVSY 454

Query: 236 DGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMH 295
           D L   +K  FLDIACF +  D DYV + L          I+ L  K LI   +  + MH
Sbjct: 455 DELSLAQKDAFLDIACF-RSQDVDYVESLLVSSDPGSAEAIKALKNKFLIDTCDGRVEMH 513

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DLL    +++  + S +   K+ RLW  +++ +V  ++ G   V GI LD    E +V  
Sbjct: 514 DLLYRFSRELDLKASTQGGSKQRRLWVRQDIINVQQKTMGAANVRGIFLD--LSEVKVET 571

Query: 356 CASAKAFSKMTNLRLLKICN------------LQLPNGLEYLSNRLRLLGWRGYPLKFLP 403
               + F  M NLR LK+ N            + +P+GLE     +R L W  +PL+ LP
Sbjct: 572 SLDREHFKNMRNLRYLKLYNSHCPHECLTNNKINMPDGLELPLKEVRCLHWLKFPLEELP 631

Query: 404 SNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
           ++      +++ + YS I  LW G+K    LK + L+HS  L  +   + A NL++L LE
Sbjct: 632 NDFDPINLVDLKLPYSEIERLWDGVKDTPVLKWVDLNHSSKLCSLSGLSKAQNLQRLNLE 691

Query: 464 GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLS 523
           GCT L                                 +SL  +NL SL           
Sbjct: 692 GCTSL---------------------------------ESLRDVNLTSL----------K 708

Query: 524 TLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEIL 583
           TL +S    F+EFP I E+   L  L+L+GT+I  LP ++  L  LVLLN+K+C+ LE +
Sbjct: 709 TLTLSNCSNFKEFPLIPEN---LKALYLDGTSISQLPDNVGNLKRLVLLNMKDCKVLETI 765

Query: 584 PVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELL 643
           P  VS LK L+ L LSGCSKLK+FPEI +S   L  L LDGTSIK +P     L  ++ L
Sbjct: 766 PTCVSELKTLQKLVLSGCSKLKEFPEINKS--SLKILLLDGTSIKTMPQ----LPSVQYL 819

Query: 644 NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTS 703
            LS   +L+ LP+ I  +  L  L+L  C KL  VPE      +L+ LD  G +      
Sbjct: 820 CLSRNDHLIYLPAGINQVSQLTRLDLKYCTKLTYVPEL---PPTLQYLDAHGCS------ 870

Query: 704 WYSYIPINLMRKSVALKLPS-LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLK 756
                      K+VA  L   +S + +    N T+C  +E A   +I +    K
Sbjct: 871 ---------SLKNVAKPLARIMSTVQNHYTFNFTNCGNLEQAAKEEITSYAQRK 915



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 205/458 (44%), Gaps = 82/458 (17%)

Query: 572  LNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP 631
            LNL+ C SLE L     NL  L++L LS CS  K+FP I  ++K    L+LDGTSI ++P
Sbjct: 688  LNLEGCTSLESLRDV--NLTSLKTLTLSNCSNFKEFPLIPENLK---ALYLDGTSISQLP 742

Query: 632  SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
             ++  L +L LLN+ DCK L  +P+ +  LK+L+ L LSGC KL+  PE      SL+ L
Sbjct: 743  DNVGNLKRLVLLNMKDCKVLETIPTCVSELKTLQKLVLSGCSKLKEFPEI--NKSSLKIL 800

Query: 692  DISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGN 751
             + GT++                     +LPS+  LC                       
Sbjct: 801  LLDGTSI-----------------KTMPQLPSVQYLC----------------------- 820

Query: 752  LCSLKELYLSKNS-FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
                    LS+N   + LP  I  +S+L  ++L+ C +L  +P+LPP ++ +  +GC+SL
Sbjct: 821  --------LSRNDHLIYLPAGINQVSQLTRLDLKYCTKLTYVPELPPTLQYLDAHGCSSL 872

Query: 811  VTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEA----VSNTRQH------- 859
              +   L    S        +       +  A   +  Y +     +S+ R+H       
Sbjct: 873  KNVAKPLARIMSTVQNHYTFNFTNCGNLEQAAKEEITSYAQRKCQLLSDARKHYNEGSEA 932

Query: 860  -LSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFG 918
              S   PG E+P WF ++  GS +      + ++ K+L G A+C V     +    +CF 
Sbjct: 933  LFSTCFPGCEVPSWFGHEAVGSLLQRKLLPH-WHDKRLSGIALCAVVSFPDSQDQLSCFS 991

Query: 919  SYPTHQLNCHIGHGI-----YGIGFRD--KFGQAGSDHLWLLYLSRQTCYDIRLPLESNL 971
               T ++       +      GI  R+  K  +  SDH+++ Y+S  + + IR   E N 
Sbjct: 992  VTCTFKIKAEDKSWVPFTCPVGIWTREGNKKDRIESDHVFIAYIS--SPHSIRCLEEKNS 1049

Query: 972  EPFESNHVNVSF---EPWLGQGL-EVKMCGLHPVYMDE 1005
            +    +  ++ F       G G+ +V  CGL  VY ++
Sbjct: 1050 DKCNFSEASLEFTVTSDTSGIGVFKVLKCGLSLVYEND 1087


>gi|357499581|ref|XP_003620079.1| Resistance protein [Medicago truncatula]
 gi|355495094|gb|AES76297.1| Resistance protein [Medicago truncatula]
          Length = 667

 Score =  308 bits (789), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 176/412 (42%), Positives = 261/412 (63%), Gaps = 8/412 (1%)

Query: 1   MDSRCEKLRFLMD-SGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + SR  K+   +D   + +V+M+GI G GG+GKTT+AR VY+ I+ +F+   FL NVRE 
Sbjct: 206 LQSRVLKVNSFLDLRSNGEVQMLGIYGTGGMGKTTLARAVYNSIADQFDGLCFLHNVREN 265

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S+K GL  LQ +LLS+L++L D  + +V +GI ++  RL RKKVLL++DDV ++KQLQ L
Sbjct: 266 SAKYGLEHLQEKLLSKLVEL-DVKLGDVNEGIPIIKQRLHRKKVLLILDDVHELKQLQVL 324

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           AG  +WFG GS++IIT++++ LL  HG++  Y+ H LN  EAL+L    AFK  +     
Sbjct: 325 AGRLDWFGLGSKVIITTQEKKLLDGHGIERAYEIHKLNDKEALELLRWNAFKNNKVDTNF 384

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  + + YA GLPLALEV+GS L G+++ EW+S L + E  P  +I +IL++SFD L+
Sbjct: 385 DDILHQAVTYASGLPLALEVVGSNLFGKNIREWKSALSQYERRPIRKIQEILKVSFDALE 444

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVH----NNTLWM 294
           E EK +FLDIAC FKG +   + N L    G      IRVL +K LI ++    N  + +
Sbjct: 445 EDEKNVFLDIACCFKGYELKELENILHAHYGNCMNYQIRVLHDKSLIKIYWYLGNYVVTL 504

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           H L++++G++IV  +SP+E G+RSRLW  +++ HVL E+ G+  +E I L+    E EV 
Sbjct: 505 HALIEKMGKEIVHEKSPKEPGRRSRLWFHKDIIHVLEENKGSSQIEIIYLEFPLSEEEV- 563

Query: 355 LCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNL 406
           +        KM NL+ L + N     G +YL N LR+L W  YP + +PS+ 
Sbjct: 564 IEWKGDELKKMQNLKTLIVKNGSFSKGPKYLPNSLRVLEWPKYPSRIIPSDF 615


>gi|297801410|ref|XP_002868589.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314425|gb|EFH44848.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1456

 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 242/696 (34%), Positives = 366/696 (52%), Gaps = 63/696 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVR-EI 59
           M++   KL  L+     +V+MIGI G  G+GKTTIAR +++ +S  F    F+ N++ + 
Sbjct: 187 METHLRKLNSLLCLECDEVKMIGIWGPAGIGKTTIARTLFNQLSTSFRFICFMGNLKGKY 246

Query: 60  SSKGGL------VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDV 113
            S  G+      + LQ QLLS++L   D  + N    +  +   LQ ++VL+++DDV D+
Sbjct: 247 KSVVGMDDYDSKLCLQNQLLSKILGQRDMRVHN----LGAIKEWLQDQRVLIILDDVDDI 302

Query: 114 KQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY 173
           ++L++LA    WFGSGSRII+T+ D+ +LK H VD  Y     + +EAL++  + AFK  
Sbjct: 303 EKLEALAKEPSWFGSGSRIIVTTEDKKILKAHWVDRFYLVDFPSEEEALEILCLSAFKQS 362

Query: 174 QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
                 ++L+ +I+ + G LPL L V+GS L G S  EW   L R+      +I D+L++
Sbjct: 363 TVRDGFMELANKIVEFCGYLPLGLSVVGSSLRGESKHEWELQLSRIGTSLDRKIEDVLRV 422

Query: 234 SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLW 293
            +D L + ++ +FL IACFF     D+VT  L         G++ L+EK LI++     W
Sbjct: 423 GYDKLSKKDQSLFLHIACFFNSKKFDHVTTLLADSNLDVSNGLKTLVEKSLISI---CWW 479

Query: 294 --MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
             MH LL++LG+QIV  QS +E GKR  L + EE+  VL   TGT  V GI  D      
Sbjct: 480 IEMHRLLEQLGRQIVIEQS-DEPGKRQFLVEAEEIRDVLENETGTGSVIGISFD---MSK 535

Query: 352 EVYLCASAKAFSKMTNLRLLKI---------CNLQLPNGLEYLSNRLRLLGWRGYPLKFL 402
            V L  S +AF  M NL+ L+           +L++   ++YL  RLRLL W  YP K L
Sbjct: 536 NVKLSISKRAFEGMRNLKFLRFYKADFCPGNVSLRILEDIDYLP-RLRLLDWYAYPGKRL 594

Query: 403 PSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
           P   Q +  IE++M +S++ +LW+GI+ L  LK + LS S  L  +PD + A  L+ L L
Sbjct: 595 PPTFQPEYLIELHMKFSKLEKLWEGIQPLKNLKEIDLSFSYKLKEIPDLSNASKLKILTL 654

Query: 463 EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCL 522
             CT L ++  S+    KL  LN+  C  L  +P  I + SLE+                
Sbjct: 655 SYCTSLVKLPSSISNLQKLKKLNVSSCEKLKVIPTNINLASLEE---------------- 698

Query: 523 STLDVSGDLKFREFPEIVEHMEHLSELHLEGTAI-RGLPLSIELLSGLVLLNLKNCRSLE 581
             +D+S     R FP+I  +++   +L++  T I +G P S   LS L  L +   RSLE
Sbjct: 699 --VDMSFCSLLRSFPDISRNIK---KLNVVSTQIEKGSPSSFRRLSCLEELFIGG-RSLE 752

Query: 582 ILP-VTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
            L  V VS    L+ L +S  S ++K P+ V  ++ L  L ++  S  ++ S   L   L
Sbjct: 753 RLTHVPVS----LKKLDISH-SGIEKIPDCVLGLQQLQSLIVE--SCTKLVSLTSLPPSL 805

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
             LN  +C +L R+  S      +K L    C KL+
Sbjct: 806 VSLNAKNCVSLERVCCSF--QDPIKDLRFYNCLKLD 839



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 144/285 (50%), Gaps = 20/285 (7%)

Query: 602 SKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           SKL+K  E ++ +K+L E+ L  +  +KE+P  +   +KL++L LS C +LV+LPSSI  
Sbjct: 611 SKLEKLWEGIQPLKNLKEIDLSFSYKLKEIPD-LSNASKLKILTLSYCTSLVKLPSSISN 669

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK 720
           L+ LK LN+S C KL+ +P  +  + SLEE+D+S  ++  S   +  I  N+ + +V   
Sbjct: 670 LQKLKKLNVSSCEKLKVIPTNIN-LASLEEVDMSFCSLLRS---FPDISRNIKKLNVVST 725

Query: 721 LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNL-CSLKELYLSKNSFVSLPTSITHLSKLL 779
                   S R+L+  +   + G     + ++  SLK+L +S +    +P  +  L +L 
Sbjct: 726 QIEKGSPSSFRRLSCLEELFIGGRSLERLTHVPVSLKKLDISHSGIEKIPDCVLGLQQLQ 785

Query: 780 NIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNK 839
           ++ +E C +L SL  LPP++  +    C SL  +  + +    D     CL         
Sbjct: 786 SLIVESCTKLVSLTSLPPSLVSLNAKNCVSLERVCCSFQDPIKDLRFYNCL--------- 836

Query: 840 SLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
                +  E   A+ + R    V +PG E+P  F ++  G+SIT 
Sbjct: 837 ----KLDEEARRAIIHQRGDWDVCLPGKEVPAEFTHKAIGNSITT 877



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 42/87 (48%)

Query: 162  LQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEI 221
            L +F + AF    P     +L+ ++    G LPL L V+   L G S  EW+  L R+E 
Sbjct: 1014 LTIFCLSAFTQSSPQDGFEELTKKVAELCGNLPLGLYVVDLSLRGESKHEWKLQLSRIET 1073

Query: 222  EPPSEILDILQISFDGLQELEKKIFLD 248
               S+I D+L IS +  ++      +D
Sbjct: 1074 TLDSKIEDVLTISMEEAEDSSSSSKMD 1100


>gi|227438199|gb|ACP30589.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1104

 Score =  307 bits (787), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 279/837 (33%), Positives = 410/837 (48%), Gaps = 91/837 (10%)

Query: 12  MDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASG---FLDNVREISSKGGLVSL 68
           MDS   D R+IGI G GG+GKTTIA+ +Y+  +H+   S    F++NV ++  + GL+ L
Sbjct: 200 MDS-KDDARIIGIVGTGGIGKTTIAKYLYE--THKLGFSPHHYFMENVAKLCREHGLLHL 256

Query: 69  QRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGS 128
           Q QLLS + +  +  + +V  G   L  RL+  KV LV DDV DV+QL +LA   +WF  
Sbjct: 257 QNQLLSSIFREKNVMLESVEHGRQQLEFRLRNAKVFLVFDDVDDVRQLDALAKEVQWFAP 316

Query: 129 GSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV-QLSARII 187
           GSRI+IT+RD+ LL +    EVY    L+ D+AL LF   AFK  QP        S+R  
Sbjct: 317 GSRIVITTRDKSLLNSC---EVYDVEYLDDDKALLLFQQIAFKGGQPPSSVYSDFSSRAS 373

Query: 188 RYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFL 247
           + A GLPLA++ LGS L G+S  EW   L   E  P   I  IL IS++ L EL K  FL
Sbjct: 374 KLAQGLPLAVKALGSSLRGKSEMEWDKALRSFEKTPYDNIPRILNISYESLDELSKTAFL 433

Query: 248 DIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWMHDLLQELGQQIV 306
            +AC F G     V + L         GIRVL EK LI +  N  + MH LL+++G+   
Sbjct: 434 HVACLFNGELVSRVKSLLHRGE----DGIRVLAEKSLIDLSTNGRIAMHHLLEKMGR--- 486

Query: 307 QRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMT 366
           + +S  +L  +  LW+  ++C  L +  GT   EGIVLD     N +      K F +M 
Sbjct: 487 RNESGNDLSLQPILWQWYDICR-LADKAGTTRTEGIVLDVSERPNHI----DWKVFMQME 541

Query: 367 NLRLLKICNLQLPNGLEYLSN----------RLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
           NL+ LKI N +    L+  +           +LRLL W  YP   LPS++  D  +E+ +
Sbjct: 542 NLKYLKIYNHRRYKSLDSRTQGNPNEILQPYKLRLLQWDAYPYTTLPSSINTDCLVEVIL 601

Query: 417 CYSRIGELWKGI-KHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           C S++  LW G    L  LK + L+ S  L  +PD   A  LE+L+LEGC  L  I  S+
Sbjct: 602 CNSKLTTLWSGSPPRLSHLKRLNLTGSMYLKELPDLKEAVYLEELMLEGCISLTRIPESI 661

Query: 476 LLHNKLIILNMKDCTSLITL------PGKILMKSLEKLNLKSLPTTISGLK--------- 520
               +L  L++ +C  L  L            +    L+++S+       +         
Sbjct: 662 CSLPRLQKLDLSNCDGLKNLIIIVRESEATFFEGRRSLHVRSVHMDFLDAEPLAEESRDI 721

Query: 521 CLSTLDVSGDLKFREFPEI---VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNC 577
            L+ L + G+LK  E   I    +H   +SE H        +P  + LL       + + 
Sbjct: 722 SLTNLSIKGNLKI-ELXVIGGYAQHFSFVSEQH--------IPHQVMLLEQQTARLMSHP 772

Query: 578 RSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELL 637
            + ++L +   N  C        C     FP ++       EL L   +I+E+P  I  +
Sbjct: 773 YNFKLLHIVQVN--CSEQRDPFECYSFSYFPWLM-------ELNLINLNIEEIPDDIHHM 823

Query: 638 TKLELLNLSDCKNLVR-LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
             LE LNLS   N  R LPSS+  L  LK + L  C +LE +P    Q+  LE L +S  
Sbjct: 824 QVLEKLNLSG--NFFRGLPSSMTHLTKLKHVRLCNCRRLEALP----QLYQLETLTLSDC 877

Query: 697 AVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLK 756
                T+ ++ + I+   +          G  +L +L L +C  +E  L   +     L 
Sbjct: 878 -----TNLHTLVSISQAEQD--------HGKYNLLELRLDNCKHVE-TLSDQLRFFTKLT 923

Query: 757 ELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL 813
            L +S++ F ++PTSI  LS L+ + L  C +L+SL +LP +I+ +  +GC SL T 
Sbjct: 924 YLDISRHDFETVPTSIKDLSSLITLCLNYCMKLKSLSELPLSIKHLYSHGCMSLETF 980


>gi|227438131|gb|ACP30555.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1074

 Score =  307 bits (787), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 277/836 (33%), Positives = 409/836 (48%), Gaps = 89/836 (10%)

Query: 12  MDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASG---FLDNVREISSKGGLVSL 68
           MDS   D R+IGI G GG+GKTTIA+ +Y+  +H+   S    F++NV ++  + GL+ L
Sbjct: 200 MDS-KDDARIIGIVGTGGIGKTTIAKYLYE--THKLGFSPHHYFMENVAKLCREHGLLHL 256

Query: 69  QRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGS 128
           Q QLLS + +  +  + +V  G   L  RL+  KV LV DDV DV+QL +LA   +WF  
Sbjct: 257 QNQLLSSIFREKNVMLESVEHGRQQLEFRLRNAKVFLVFDDVDDVRQLDALAKEVQWFAP 316

Query: 129 GSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV-QLSARII 187
           GSRI+IT+RD+ LL +    EVY    L+ D+AL LF   AFK  QP        S+R  
Sbjct: 317 GSRIVITTRDKSLLNSC---EVYDVEYLDDDKALLLFQQIAFKGGQPPSSVYSDFSSRAS 373

Query: 188 RYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFL 247
           + A GLPLA++ LGS L G+S  EW   L   E  P   I  IL IS++ L EL K  FL
Sbjct: 374 KLAQGLPLAVKALGSSLRGKSEMEWDKALRSFEKTPYDNIPRILNISYESLDELSKTAFL 433

Query: 248 DIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWMHDLLQELGQQIV 306
            +AC F G     V + L         GIRVL EK LI +  N  + MH LL+++G+   
Sbjct: 434 HVACLFNGELVSRVKSLLH----RGEDGIRVLAEKSLIDLSTNGRIAMHHLLEKMGR--- 486

Query: 307 QRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMT 366
           + +S  +L  +  LW+  ++C  L +  GT   EGIVLD     N +      K F +M 
Sbjct: 487 RNESGNDLSLQPILWQWYDICR-LADKAGTTRTEGIVLDVSERPNHI----DWKVFMQME 541

Query: 367 NLRLLKICNLQLPNGLEYLSN----------RLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
           NL+ LKI N +    L+  +           +LRLL W  YP   LPS++  D  +E+ +
Sbjct: 542 NLKYLKIYNHRRYKSLDSRTQGNPNEILQPYKLRLLQWDAYPYTTLPSSINTDCLVEVIL 601

Query: 417 CYSRIGELWKGI-KHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           C S++  LW G    L  LK + L+ S  L  +PD   A  LE+L+LEGC  L  I  S+
Sbjct: 602 CNSKLTTLWSGSPPRLSHLKRLNLTGSMYLKELPDLKEAVYLEELMLEGCISLTRIPESI 661

Query: 476 LLHNKLIILNMKDCTSLITL------PGKILMKSLEKLNLKSLPTTISGLK--------- 520
               +L  L++ +C  L  L            +    L+++S+       +         
Sbjct: 662 CSLPRLQKLDLSNCDGLKNLIIIVRESEATFFEGRRSLHVRSVHMDFLDAEPLAEESRDI 721

Query: 521 CLSTLDVSGDLK--FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCR 578
            L+ L + G+LK   +      +H   +SE H        +P  + LL       + +  
Sbjct: 722 SLTNLSIKGNLKIELKVIGGYAQHFSFVSEQH--------IPHQVMLLEQQTARLMSHPY 773

Query: 579 SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLT 638
           + ++L +   N  C        C     FP ++       EL L   +I+E+P  I  + 
Sbjct: 774 NFKLLHIVQVN--CSEQRDPFECYSFSYFPWLM-------ELNLINLNIEEIPDDIHHMQ 824

Query: 639 KLELLNLSDCKNLVR-LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA 697
            LE LNLS   N  R LPSS+  L  LK + L  C +LE +P    Q+  LE L +S   
Sbjct: 825 VLEKLNLSG--NFFRGLPSSMTHLTKLKHVRLCNCRRLEALP----QLYQLETLTLSDC- 877

Query: 698 VPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKE 757
               T+ ++ + I+   +          G  +L +L L +C  +E  L   +     L  
Sbjct: 878 ----TNLHTLVSISQAEQD--------HGKYNLLELRLDNCKHVE-TLSDQLRFFTKLTY 924

Query: 758 LYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL 813
           L +S++ F ++PTSI  LS L+ + L  C +L+SL +LP +I+ +  +GC SL T 
Sbjct: 925 LDISRHDFETVPTSIKDLSSLITLCLNYCMKLKSLSELPLSIKHLYSHGCMSLETF 980


>gi|30683870|ref|NP_193428.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658426|gb|AEE83826.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1449

 Score =  307 bits (787), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 274/909 (30%), Positives = 451/909 (49%), Gaps = 121/909 (13%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +++  E ++ ++   S + RM+GI G  G+GK+TI R ++  +S +F    FL       
Sbjct: 191  IEAHIEAIKSVLCLESKEARMVGIWGQSGIGKSTIGRALFSQLSIQFPLRAFLTYKSTSG 250

Query: 61   S--KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            S   G  +S +++LLS++L   D  I    +   ++  RL+ KKVL+++DDV +++ L++
Sbjct: 251  SDVSGMKLSWEKELLSEILGQKDIKI----EHFGVVEQRLKHKKVLILLDDVDNLEFLKT 306

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            L G  EWFGSGSRII+ ++D   LK H +D VY+    +   AL +    AF    P  +
Sbjct: 307  LVGKAEWFGSGSRIIVITQDRQFLKAHDIDLVYEVKLPSQGLALTMLCRSAFGKDSPPDD 366

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
              +L+  + + AG LPL L VLGS L  R   EW   + RL      +I+  L++S+D L
Sbjct: 367  FKELAFEVAKLAGHLPLGLNVLGSSLRRRGKKEWMEMMPRLRNGLNGDIMKTLRVSYDRL 426

Query: 239  QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDL 297
             + ++ +FL IAC F G +  YV + LE       +G+ +L EK LI +  +  + MH+L
Sbjct: 427  HQKDQDMFLCIACLFNGFEVSYVKDLLED-----NVGLTMLSEKSLIRITPDGHIEMHNL 481

Query: 298  LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
            L++LG++I + +S    GKR  L   E++  V+TE TGTE + GI L    + +   L  
Sbjct: 482  LEKLGREIDRAKSKGNPGKRQFLTNFEDIHEVVTEKTGTETLLGIRLPFEEYFSTRPLLI 541

Query: 358  SAKAFSKMTNLRLLKICNLQ---LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
              ++F  M NL+ LKI +      P  L YL  +LRLL W   PLK LPS  + +  + +
Sbjct: 542  DKESFKGMRNLQYLKIGDWSDGGQPQSLVYLPLKLRLLDWDDCPLKSLPSTFKAEYLVNL 601

Query: 415  YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
             M YS++ +LW+G   L  LK M L  S+NL  +PD + A NLE+L LEGC  L  +  S
Sbjct: 602  IMKYSKLEKLWEGTLPLGSLKKMNLLCSKNLKEIPDLSNARNLEELDLEGCESLVTLPSS 661

Query: 475  LL-------LH-NKLIILNMK-------------DCT------SLITLPGKI-------- 499
            +        LH + +I++++K             DC+       ++  P K+        
Sbjct: 662  IQNAIKLRKLHCSGVILIDLKSLEGMCNLEYLSVDCSRVEGTQGIVYFPSKLRLLLWNNC 721

Query: 500  -------------LMK-SLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEH 545
                         L+K  +E  +L+ L      L  L  + + G    +E P++   + +
Sbjct: 722  PLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLAI-N 780

Query: 546  LSELHL-EGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKL 604
            L E+ + +  ++   P S++    L+ L++ +C+ LE  P  + NL+ L  L L+GC  L
Sbjct: 781  LEEVDICKCESLVTFPSSMQNAIKLIYLDISDCKKLESFPTDL-NLESLEYLNLTGCPNL 839

Query: 605  KKFPEIVRSMKDLSELFLDGTS---------IKEVPSSIELLTKLELLNLSDCKNLVRLP 655
            + FP I     D+   F +G +          K +P+ ++ L         DC  L+R  
Sbjct: 840  RNFPAIKMGCSDVD--FPEGRNEIVVEDCFWNKNLPAGLDYL---------DC--LMRCM 886

Query: 656  SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRK 715
                  + L  LN+  C+K E + E +  + SLEE+D+S +              NL   
Sbjct: 887  PCEFRPEYLVFLNVR-CYKHEKLWEGIQSLGSLEEMDLSESE-------------NLT-- 930

Query: 716  SVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS-LPTSITH 774
                ++P LS   +L+ L L +C  +   LPS IGNL  L  L + + + +  LPT + +
Sbjct: 931  ----EIPDLSKATNLKHLYLNNCKSLV-TLPSTIGNLQKLVRLEMKECTGLEVLPTDV-N 984

Query: 775  LSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCA-------SLVTLLDALKL--CKSDST 825
            LS L  ++L  C  L++ P +  +I+ + +   A       S  T L++L L  CKS  T
Sbjct: 985  LSSLETLDLSGCSSLRTFPLISKSIKWLYLENTAIEEILDLSKATKLESLILNNCKSLVT 1044

Query: 826  MIACLDSLK 834
            + + + +L+
Sbjct: 1045 LPSTIGNLQ 1053



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 217/458 (47%), Gaps = 58/458 (12%)

Query: 360  KAFSKMTNLRLLKI--CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
            K+   M NL  L +    ++   G+ Y  ++LRLL W   PLK L SN +++  +++ M 
Sbjct: 682  KSLEGMCNLEYLSVDCSRVEGTQGIVYFPSKLRLLLWNNCPLKRLHSNFKVEYLVKLRME 741

Query: 418  YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
             S + +LW G + L +LK M L  S+ L  +PD + A NLE++ +  C  L     S+  
Sbjct: 742  NSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLEEVDICKCESLVTFPSSMQN 801

Query: 478  HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
              KLI L++ DC  L + P  + ++SLE LNL   P                    R FP
Sbjct: 802  AIKLIYLDISDCKKLESFPTDLNLESLEYLNLTGCPN------------------LRNFP 843

Query: 538  EI------VEHMEHLSELHLEGTAI-RGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
             I      V+  E  +E+ +E     + LP  ++ L  L+      C   E  P  +  L
Sbjct: 844  AIKMGCSDVDFPEGRNEIVVEDCFWNKNLPAGLDYLDCLM-----RCMPCEFRPEYLVFL 898

Query: 591  KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCK 649
                      C K +K  E ++S+  L E+ L +  ++ E+P  +   T L+ L L++CK
Sbjct: 899  NV-------RCYKHEKLWEGIQSLGSLEEMDLSESENLTEIPD-LSKATNLKHLYLNNCK 950

Query: 650  NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA-------VPHST 702
            +LV LPS+I  L+ L  L +  C  LE +P  +  + SLE LD+SG +       +  S 
Sbjct: 951  SLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDV-NLSSLETLDLSGCSSLRTFPLISKSI 1009

Query: 703  SWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK 762
             W        +  +   ++  LS    L  L L +C  +   LPS IGNL +L+ LY+ +
Sbjct: 1010 KWL------YLENTAIEEILDLSKATKLESLILNNCKSLV-TLPSTIGNLQNLRRLYMKR 1062

Query: 763  NSFVS-LPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
             + +  LPT + +LS L  ++L  C  L++ P +  NI
Sbjct: 1063 CTGLEVLPTDV-NLSSLGILDLSGCSSLRTFPLISTNI 1099



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 161/350 (46%), Gaps = 61/350 (17%)

Query: 375  NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKL 434
            N  LP GL+YL   +R +     P +F P  L          CY    +LW+GI+ L  L
Sbjct: 869  NKNLPAGLDYLDCLMRCM-----PCEFRPEYLVFLNV----RCYKH-EKLWEGIQSLGSL 918

Query: 435  KVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLIT 494
            + M LS SENL  +PD + A NL+ L L  C  L  +  ++    KL+ L MK+CT L  
Sbjct: 919  EEMDLSESENLTEIPDLSKATNLKHLYLNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEV 978

Query: 495  LPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT 554
            LP  + + SLE                  TLD+SG    R FP I + ++ L   +LE T
Sbjct: 979  LPTDVNLSSLE------------------TLDLSGCSSLRTFPLISKSIKWL---YLENT 1017

Query: 555  AIR-----------------------GLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
            AI                         LP +I  L  L  L +K C  LE+LP  V NL 
Sbjct: 1018 AIEEILDLSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDV-NLS 1076

Query: 592  CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
             L  L LSGCS L+ FP I     ++  L+L+ T+I EVP  IE  T+L +L +  C+ L
Sbjct: 1077 SLGILDLSGCSSLRTFPLIS---TNIVWLYLENTAIGEVPCCIEDFTRLRVLLMYCCQRL 1133

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHS 701
              +  +I  L+SL   + + C     V + L     +  ++ S + VP S
Sbjct: 1134 KNISPNIFRLRSLMFADFTDC---RGVIKALSDATVVATMEDSVSCVPLS 1180


>gi|15242338|ref|NP_199336.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9759608|dbj|BAB11396.1| disease resistance protein RPS4 [Arabidopsis thaliana]
 gi|332007836|gb|AED95219.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1231

 Score =  307 bits (786), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 254/733 (34%), Positives = 370/733 (50%), Gaps = 94/733 (12%)

Query: 2   DSRCEKL--RFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           D R ++L  +  ++   ++ R++ + GM G+GKT +A+ ++  +  +     F++  RE+
Sbjct: 219 DQRLKQLAVKLNVECNDNETRIVEVVGMPGIGKTYLAKKLFAKLKKKINHCVFIEFKREM 278

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQL-QS 118
           S++ G   LQ++L+  LL + D +  N    +++    L  KKV++V DDV D KQ+ + 
Sbjct: 279 SAEQGSEWLQKRLVEGLLDIQDCTDTN---ALEVWKDSLIDKKVVIVFDDVSDKKQISEP 335

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHG-VDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
           L G  +W   GS I+IT+RD+ L  T G V ++Y+  GLN  + L+LF  +     +   
Sbjct: 336 LKGICDWIKKGSMIVITTRDKSL--TEGLVTDLYEVPGLNERDGLELFRAQVCCNIE--G 391

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
             ++LS + + +A G PLALE  G  L G+    W + L  L       I + L+ S+D 
Sbjct: 392 NFMELSRKFVDFARGNPLALEEFGKELRGKDEAHWETRLGTLAQHSNPTIREKLRSSYDE 451

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIG-----IRVLIEKCLITVHNNTL 292
           L E +K  FLDIA FF+  D  YV + L+   + P         R L +K LI V +  +
Sbjct: 452 LNEQQKDAFLDIAYFFRSQDESYVRSLLDS--YDPESAESGQEFRDLADKFLIGVCDGRV 509

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLW----KEEEVCHVLTESTGTELVEGIVLDNYH 348
            MHDLL  + ++IV     E   ++SRL      E +   +  +  G + V GIVLD   
Sbjct: 510 EMHDLLFTMAKEIV-----EATAEKSRLLLSSCAELKNKELSLDQQGRDKVRGIVLDMSE 564

Query: 349 HENEVYLCASAKAFSKMTNLRLLKI------------CNLQLPNGLEY-LSNRLRLLGWR 395
            E +    A    F  M++LR LK+            C L LP+GLE+   N +R L W 
Sbjct: 565 MEEKPLKRA---VFVGMSSLRYLKVYSSLCPTHSKTECKLHLPDGLEFPKDNIVRCLHWV 621

Query: 396 GYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAP 455
            +P   LP +   +  I++ + YS I  LW   K    LK + LSHS NL  +   + AP
Sbjct: 622 KFPGTELPPDFYPNNLIDLRLPYSNITTLWSCTKVAPNLKWVDLSHSSNLNSLMGLSEAP 681

Query: 456 NLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTT 515
           NL +L LEGCT L E+   +     L+ LN++ CTSL++LP KI   SL+          
Sbjct: 682 NLLRLNLEGCTSLKELPDEMKDMTNLVFLNLRGCTSLLSLP-KITTNSLK---------- 730

Query: 516 ISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLK 575
                   TL +SG   F+ F  I EH+E    L+L GT I GLP +I  L  L+ LNLK
Sbjct: 731 --------TLILSGCSSFQTFEVISEHLE---SLYLNGTEINGLPPAIGNLHRLIFLNLK 779

Query: 576 NCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIE 635
           +C++L  LP  +  LK L+ LKLS CSKLK FP++   M+ L  L LDGTSI E+P SI 
Sbjct: 780 DCKNLATLPDCLGELKSLQELKLSRCSKLKIFPDVTAKMESLLVLLLDGTSIAELPCSIF 839

Query: 636 LLTKLELLNLSD------------------------CKNLVRLPSSIIALKSLKTLNLSG 671
            L+ L  L LS                         CKNL  LP   I   +L+ LN  G
Sbjct: 840 HLSSLRRLCLSRNDNIRTLRFDMGHMFHLKWLELKYCKNLTSLP---ILPPNLQCLNAHG 896

Query: 672 CFKLENV--PETL 682
           C  L  V  P+TL
Sbjct: 897 CTSLRTVASPQTL 909



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 162/608 (26%), Positives = 257/608 (42%), Gaps = 102/608 (16%)

Query: 485  NMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCL-STLDVSGDLKFREFPEI---- 539
            N+  C   +  PG  L       NL  L    S +  L S   V+ +LK+ +        
Sbjct: 613  NIVRCLHWVKFPGTELPPDFYPNNLIDLRLPYSNITTLWSCTKVAPNLKWVDLSHSSNLN 672

Query: 540  ----VEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
                +    +L  L+LEG T+++ LP  ++ ++ LV LNL+ C SL  LP   +N   L+
Sbjct: 673  SLMGLSEAPNLLRLNLEGCTSLKELPDEMKDMTNLVFLNLRGCTSLLSLPKITTN--SLK 730

Query: 595  SLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRL 654
            +L LSGCS  + F  I    + L  L+L+GT I  +P +I  L +L  LNL DCKNL  L
Sbjct: 731  TLILSGCSSFQTFEVI---SEHLESLYLNGTEINGLPPAIGNLHRLIFLNLKDCKNLATL 787

Query: 655  PSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMR 714
            P  +  LKSL+ L LS C KL+  P+   ++ESL  L + GT++                
Sbjct: 788  PDCLGELKSLQELKLSRCSKLKIFPDVTAKMESLLVLLLDGTSI---------------- 831

Query: 715  KSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFV-SLPTSIT 773
                                          LP  I +L SL+ L LS+N  + +L   + 
Sbjct: 832  ----------------------------AELPCSIFHLSSLRRLCLSRNDNIRTLRFDMG 863

Query: 774  HLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKL------CKSDSTMI 827
            H+  L  +EL+ CK L SLP LPPN++ +  +GC SL T+     L        S     
Sbjct: 864  HMFHLKWLELKYCKNLTSLPILPPNLQCLNAHGCTSLRTVASPQTLPTPTEQIHSTFIFT 923

Query: 828  ACLDSLKLLGNKSLAFSMLREYLEAVSN------TRQHLSVVVPGSEIPEWFMYQNEGSS 881
             C +  ++  N  +++   +  L +          +  +    PG EIP WF +Q  GS 
Sbjct: 924  NCHELEQVSKNAIISYVQKKSKLMSADRYSPDFVYKSLIGTCFPGCEIPAWFNHQALGSV 983

Query: 882  ITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQL-NCHIGHGIYGIGFRD 940
            + +  P   +N  +++G A+C V    +    N+      T +  N  +    + +G   
Sbjct: 984  LILELP-QAWNSSRIIGIALCVVVSFKEYRDQNSSLQVQCTCEFTNVSLSQESFMVGGWS 1042

Query: 941  KFGQ----AGSDHLWLLYLSRQTCYDIRLPLESNLEPFE-SNHVNVSFEPWLG----QGL 991
            + G       SDH+++ Y    T  +I+     N + F  +  +++ F+   G    +  
Sbjct: 1043 EQGDETHTVESDHIFIGY---TTLLNIK-----NRQQFPLATEISLRFQVTNGTSEVEKC 1094

Query: 992  EVKMCGLHPVYMDEVEELDQTT---------NQPSRFTVYNLNEFDQHFVGSKMIVATTS 1042
            +V  CG   VY  E  E D T+         N+  R   +   E D   + +     +  
Sbjct: 1095 KVIKCGFSLVY--EPNEADSTSWKETPRMEDNRQDRRISFKTGEGDDCPIATPTTADSKK 1152

Query: 1043 KRSLTEYF 1050
              SL  YF
Sbjct: 1153 GNSLFSYF 1160


>gi|6449046|gb|AAF08790.1| downy mildew resistance protein RPP5 [Arabidopsis thaliana]
          Length = 1361

 Score =  307 bits (786), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 281/960 (29%), Positives = 448/960 (46%), Gaps = 148/960 (15%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +++  E ++ ++   S + RM+GI G  G+GK+TI R ++  +S +F    FL       
Sbjct: 191  IEAHIEAIKSVLCLESKEARMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFLTYKSTSG 250

Query: 61   S--KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            S   G  +S Q++LLS++L   D  I    +   ++  RL  KKVL+++DDV +++ L++
Sbjct: 251  SDVSGMKLSWQKELLSEILGQKDIKI----EHFGVVEQRLNHKKVLILLDDVDNLEFLKT 306

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            L G  EWFGSGSRII+ ++D  LLK H +D VY+    +   AL++ +  AF    P  +
Sbjct: 307  LVGKAEWFGSGSRIIVITQDRQLLKAHEIDLVYEVKLPSQGLALKMISQYAFGKDSPPDD 366

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
              +L+  +    G LPL L VLGS L GR  DEW   + RL  +   +I + L++ +D L
Sbjct: 367  FKELAFEVAELVGSLPLGLSVLGSSLKGRDKDEWVKMMPRLRNDSDDKIEETLRVGYDRL 426

Query: 239  QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDL 297
             +  +++F  IACFF G     V   LE       +G+ +L E+ LI +     + MH+L
Sbjct: 427  NKKNRELFKCIACFFNGFKVSNVKELLED-----DVGLTMLAEESLIRITPVGYIEMHNL 481

Query: 298  LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
            L++LG++I + +S    GKR  L   E++  VLTE TGTE + GI L +  +        
Sbjct: 482  LEKLGREIDRAKSKGNPGKRQFLTNFEDIREVLTEKTGTETLLGIRLPHPGYLTTRSFLI 541

Query: 358  SAKAFSKMTNLRLLKI---CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
              K+F  M NL+ L+I    +  LP  L Y   +L+ L W   PLK LPSN + +  +E+
Sbjct: 542  DEKSFKGMRNLQYLEIGYWSDGVLPQSLVYFPRKLKRLWWDNCPLKRLPSNFKAEYLVEL 601

Query: 415  YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
             M  S++ +LW G + L  LK M L +S  L  +PD + A NLE+L LE C  L  +  S
Sbjct: 602  RMVNSKLEKLWDGTQPLGSLKKMDLYNSYKLKEIPDLSLAINLEELNLEECESLETLPSS 661

Query: 475  LLLHNKLIILNM---------------------------KDCTS-LITLPGKILMKSLEK 506
            +    KL  LN                            ++CT  ++  P K+       
Sbjct: 662  IQNAIKLRELNCWGGLLIDLKSLEGMCNLEYLSVPSWSSRECTQGIVYFPRKLKSVLWTN 721

Query: 507  LNLKSLPTTISG----------------------LKCLSTLDVSGDLKFREFPEIVEHME 544
              LK LP+                          L  L  +++      +E P++   + 
Sbjct: 722  CPLKRLPSNFKAEYLVELIMEYSELEKLWDGTQSLGSLKEMNLRYSNNLKEIPDLSLAI- 780

Query: 545  HLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            +L EL L G  ++  LP SI+  + L+ L++  C +LE  P TV NLK L  L L+GC  
Sbjct: 781  NLEELDLFGCVSLVTLPSSIQNATKLIYLDMSECENLESFP-TVFNLKSLEYLDLTGCPN 839

Query: 604  LKKFPEI-------------------------------------------VRSM------ 614
            L+ FP I                                           +R M      
Sbjct: 840  LRNFPAIKMGCAWTRLSRTRLFPEGRNEIVVEDCFWNKNLPAGLDYLDCLMRCMPCEFRS 899

Query: 615  KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
            + L+ L + G  ++++   I+ L  LE ++LS+ +NL  LP  +    +LK L LSGC  
Sbjct: 900  EQLTFLNVSGCKLEKLWEGIQSLGSLEEMDLSESENLKELP-DLSKATNLKLLCLSGCKS 958

Query: 675  LENVPETLGQIE-----------------------SLEELDISGTAVPHSTSWYSYIPIN 711
            L  +P T+G ++                       SLE LD+SG +   +    S   + 
Sbjct: 959  LVTLPSTIGNLQNLRRLYMNRCTGLEVLPTDVNLSSLETLDLSGCSSLRTFPLISTNIVC 1018

Query: 712  LMRKSVAL-KLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPT 770
            L  ++ A+ ++P LS    L  L L +C  +   LPS IGNL +L+ LY+++ + + L  
Sbjct: 1019 LYLENTAIEEIPDLSKATKLESLILNNCKSL-VTLPSTIGNLQNLRRLYMNRCTGLELLP 1077

Query: 771  SITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACL 830
            +  +LS L  ++L  C  L++ P +   I  + +   A     ++ +  C  D T +  L
Sbjct: 1078 TDVNLSSLETLDLSGCSSLRTFPLISTRIECLYLENTA-----IEEVPCCIEDFTRLTVL 1132



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 160/332 (48%), Gaps = 33/332 (9%)

Query: 375  NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKL 434
            N  LP GL+YL   +R +     P +F    L     + +  C  ++ +LW+GI+ L  L
Sbjct: 876  NKNLPAGLDYLDCLMRCM-----PCEFRSEQLTF---LNVSGC--KLEKLWEGIQSLGSL 925

Query: 435  KVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLIT 494
            + M LS SENL  +PD + A NL+ L L GC  L  +  ++     L  L M  CT L  
Sbjct: 926  EEMDLSESENLKELPDLSKATNLKLLCLSGCKSLVTLPSTIGNLQNLRRLYMNRCTGLEV 985

Query: 495  LPGKILMKSLEKLNL------KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSE 548
            LP  + + SLE L+L      ++ P   + + CL   + +      E P++ +  +  S 
Sbjct: 986  LPTDVNLSSLETLDLSGCSSLRTFPLISTNIVCLYLENTA----IEEIPDLSKATKLESL 1041

Query: 549  LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
            +     ++  LP +I  L  L  L +  C  LE+LP  V NL  L +L LSGCS L+ FP
Sbjct: 1042 ILNNCKSLVTLPSTIGNLQNLRRLYMNRCTGLELLPTDV-NLSSLETLDLSGCSSLRTFP 1100

Query: 609  EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
             I   ++ L   +L+ T+I+EVP  IE  T+L +L +  C+ L  +  +I  L SL   +
Sbjct: 1101 LISTRIECL---YLENTAIEEVPCCIEDFTRLTVLRMYCCQRLKNISPNIFRLTSLTLAD 1157

Query: 669  LSGCFKLENVPETLGQIESLEELDISGTAVPH 700
             + C          G I++L +  +  T   H
Sbjct: 1158 FTDC---------RGVIKALSDATVVATMEDH 1180


>gi|30683875|ref|NP_849398.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658427|gb|AEE83827.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1404

 Score =  306 bits (785), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 274/909 (30%), Positives = 451/909 (49%), Gaps = 121/909 (13%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +++  E ++ ++   S + RM+GI G  G+GK+TI R ++  +S +F    FL       
Sbjct: 191  IEAHIEAIKSVLCLESKEARMVGIWGQSGIGKSTIGRALFSQLSIQFPLRAFLTYKSTSG 250

Query: 61   S--KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            S   G  +S +++LLS++L   D  I    +   ++  RL+ KKVL+++DDV +++ L++
Sbjct: 251  SDVSGMKLSWEKELLSEILGQKDIKI----EHFGVVEQRLKHKKVLILLDDVDNLEFLKT 306

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            L G  EWFGSGSRII+ ++D   LK H +D VY+    +   AL +    AF    P  +
Sbjct: 307  LVGKAEWFGSGSRIIVITQDRQFLKAHDIDLVYEVKLPSQGLALTMLCRSAFGKDSPPDD 366

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
              +L+  + + AG LPL L VLGS L  R   EW   + RL      +I+  L++S+D L
Sbjct: 367  FKELAFEVAKLAGHLPLGLNVLGSSLRRRGKKEWMEMMPRLRNGLNGDIMKTLRVSYDRL 426

Query: 239  QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDL 297
             + ++ +FL IAC F G +  YV + LE       +G+ +L EK LI +  +  + MH+L
Sbjct: 427  HQKDQDMFLCIACLFNGFEVSYVKDLLED-----NVGLTMLSEKSLIRITPDGHIEMHNL 481

Query: 298  LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
            L++LG++I + +S    GKR  L   E++  V+TE TGTE + GI L    + +   L  
Sbjct: 482  LEKLGREIDRAKSKGNPGKRQFLTNFEDIHEVVTEKTGTETLLGIRLPFEEYFSTRPLLI 541

Query: 358  SAKAFSKMTNLRLLKICNLQ---LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
              ++F  M NL+ LKI +      P  L YL  +LRLL W   PLK LPS  + +  + +
Sbjct: 542  DKESFKGMRNLQYLKIGDWSDGGQPQSLVYLPLKLRLLDWDDCPLKSLPSTFKAEYLVNL 601

Query: 415  YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
             M YS++ +LW+G   L  LK M L  S+NL  +PD + A NLE+L LEGC  L  +  S
Sbjct: 602  IMKYSKLEKLWEGTLPLGSLKKMNLLCSKNLKEIPDLSNARNLEELDLEGCESLVTLPSS 661

Query: 475  LL-------LH-NKLIILNMK-------------DCT------SLITLPGKI-------- 499
            +        LH + +I++++K             DC+       ++  P K+        
Sbjct: 662  IQNAIKLRKLHCSGVILIDLKSLEGMCNLEYLSVDCSRVEGTQGIVYFPSKLRLLLWNNC 721

Query: 500  -------------LMK-SLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEH 545
                         L+K  +E  +L+ L      L  L  + + G    +E P++   + +
Sbjct: 722  PLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLAI-N 780

Query: 546  LSELHL-EGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKL 604
            L E+ + +  ++   P S++    L+ L++ +C+ LE  P  + NL+ L  L L+GC  L
Sbjct: 781  LEEVDICKCESLVTFPSSMQNAIKLIYLDISDCKKLESFPTDL-NLESLEYLNLTGCPNL 839

Query: 605  KKFPEIVRSMKDLSELFLDGTS---------IKEVPSSIELLTKLELLNLSDCKNLVRLP 655
            + FP I     D+   F +G +          K +P+ ++ L         DC  L+R  
Sbjct: 840  RNFPAIKMGCSDVD--FPEGRNEIVVEDCFWNKNLPAGLDYL---------DC--LMRCM 886

Query: 656  SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRK 715
                  + L  LN+  C+K E + E +  + SLEE+D+S +              NL   
Sbjct: 887  PCEFRPEYLVFLNVR-CYKHEKLWEGIQSLGSLEEMDLSESE-------------NLT-- 930

Query: 716  SVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS-LPTSITH 774
                ++P LS   +L+ L L +C  +   LPS IGNL  L  L + + + +  LPT + +
Sbjct: 931  ----EIPDLSKATNLKHLYLNNCKSLV-TLPSTIGNLQKLVRLEMKECTGLEVLPTDV-N 984

Query: 775  LSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCA-------SLVTLLDALKL--CKSDST 825
            LS L  ++L  C  L++ P +  +I+ + +   A       S  T L++L L  CKS  T
Sbjct: 985  LSSLETLDLSGCSSLRTFPLISKSIKWLYLENTAIEEILDLSKATKLESLILNNCKSLVT 1044

Query: 826  MIACLDSLK 834
            + + + +L+
Sbjct: 1045 LPSTIGNLQ 1053



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 217/458 (47%), Gaps = 58/458 (12%)

Query: 360  KAFSKMTNLRLLKI--CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
            K+   M NL  L +    ++   G+ Y  ++LRLL W   PLK L SN +++  +++ M 
Sbjct: 682  KSLEGMCNLEYLSVDCSRVEGTQGIVYFPSKLRLLLWNNCPLKRLHSNFKVEYLVKLRME 741

Query: 418  YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
             S + +LW G + L +LK M L  S+ L  +PD + A NLE++ +  C  L     S+  
Sbjct: 742  NSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLEEVDICKCESLVTFPSSMQN 801

Query: 478  HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
              KLI L++ DC  L + P  + ++SLE LNL   P                    R FP
Sbjct: 802  AIKLIYLDISDCKKLESFPTDLNLESLEYLNLTGCPN------------------LRNFP 843

Query: 538  EI------VEHMEHLSELHLEGTAI-RGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
             I      V+  E  +E+ +E     + LP  ++ L  L+      C   E  P  +  L
Sbjct: 844  AIKMGCSDVDFPEGRNEIVVEDCFWNKNLPAGLDYLDCLM-----RCMPCEFRPEYLVFL 898

Query: 591  KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCK 649
                      C K +K  E ++S+  L E+ L +  ++ E+P  +   T L+ L L++CK
Sbjct: 899  NV-------RCYKHEKLWEGIQSLGSLEEMDLSESENLTEIPD-LSKATNLKHLYLNNCK 950

Query: 650  NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA-------VPHST 702
            +LV LPS+I  L+ L  L +  C  LE +P  +  + SLE LD+SG +       +  S 
Sbjct: 951  SLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDV-NLSSLETLDLSGCSSLRTFPLISKSI 1009

Query: 703  SWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK 762
             W        +  +   ++  LS    L  L L +C  +   LPS IGNL +L+ LY+ +
Sbjct: 1010 KWL------YLENTAIEEILDLSKATKLESLILNNCKSLV-TLPSTIGNLQNLRRLYMKR 1062

Query: 763  NSFVS-LPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
             + +  LPT + +LS L  ++L  C  L++ P +  NI
Sbjct: 1063 CTGLEVLPTDV-NLSSLGILDLSGCSSLRTFPLISTNI 1099



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 161/350 (46%), Gaps = 61/350 (17%)

Query: 375  NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKL 434
            N  LP GL+YL   +R +     P +F P  L          CY    +LW+GI+ L  L
Sbjct: 869  NKNLPAGLDYLDCLMRCM-----PCEFRPEYLVFLNV----RCYKH-EKLWEGIQSLGSL 918

Query: 435  KVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLIT 494
            + M LS SENL  +PD + A NL+ L L  C  L  +  ++    KL+ L MK+CT L  
Sbjct: 919  EEMDLSESENLTEIPDLSKATNLKHLYLNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEV 978

Query: 495  LPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT 554
            LP  + + SLE                  TLD+SG    R FP I + ++ L   +LE T
Sbjct: 979  LPTDVNLSSLE------------------TLDLSGCSSLRTFPLISKSIKWL---YLENT 1017

Query: 555  AIR-----------------------GLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
            AI                         LP +I  L  L  L +K C  LE+LP  V NL 
Sbjct: 1018 AIEEILDLSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDV-NLS 1076

Query: 592  CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
             L  L LSGCS L+ FP I     ++  L+L+ T+I EVP  IE  T+L +L +  C+ L
Sbjct: 1077 SLGILDLSGCSSLRTFPLIS---TNIVWLYLENTAIGEVPCCIEDFTRLRVLLMYCCQRL 1133

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHS 701
              +  +I  L+SL   + + C     V + L     +  ++ S + VP S
Sbjct: 1134 KNISPNIFRLRSLMFADFTDC---RGVIKALSDATVVATMEDSVSCVPLS 1180


>gi|5302807|emb|CAB46048.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268446|emb|CAB80966.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 1317

 Score =  306 bits (785), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 274/909 (30%), Positives = 449/909 (49%), Gaps = 121/909 (13%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +++  E ++ ++   S + RM+GI G  G+GK+TI R ++  +S +F    FL       
Sbjct: 191  IEAHIEAIKSVLCLESKEARMVGIWGQSGIGKSTIGRALFSQLSIQFPLRAFLTYKSTSG 250

Query: 61   S--KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            S   G  +S +++LLS++L   D  I    +   ++  RL+ KKVL+++DDV +++ L++
Sbjct: 251  SDVSGMKLSWEKELLSEILGQKDIKI----EHFGVVEQRLKHKKVLILLDDVDNLEFLKT 306

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            L G  EWFGSGSRII+ ++D   LK H +D VY+    +   AL +    AF    P  +
Sbjct: 307  LVGKAEWFGSGSRIIVITQDRQFLKAHDIDLVYEVKLPSQGLALTMLCRSAFGKDSPPDD 366

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
              +L+  + + AG LPL L VLGS L  R   EW   + RL      +I+  L++S+D L
Sbjct: 367  FKELAFEVAKLAGHLPLGLNVLGSSLRRRGKKEWMEMMPRLRNGLNGDIMKTLRVSYDRL 426

Query: 239  QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDL 297
             + ++ +FL IAC F G +  YV + LE       +G+ +L EK LI +  +  + MH+L
Sbjct: 427  HQKDQDMFLCIACLFNGFEVSYVKDLLED-----NVGLTMLSEKSLIRITPDGHIEMHNL 481

Query: 298  LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
            L++LG++I + +S    GKR  L   E++  V+TE TGTE + GI L    + +   L  
Sbjct: 482  LEKLGREIDRAKSKGNPGKRQFLTNFEDIHEVVTEKTGTETLLGIRLPFEEYFSTRPLLI 541

Query: 358  SAKAFSKMTNLRLLKICNLQ---LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
              ++F  M NL+ LKI +      P  L YL  +LRLL W   PLK LPS  + +  + +
Sbjct: 542  DKESFKGMRNLQYLKIGDWSDGGQPQSLVYLPLKLRLLDWDDCPLKSLPSTFKAEYLVNL 601

Query: 415  YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
             M YS++ +LW+G   L  LK M L  S+NL  +PD + A NLE+L LEGC  L  +  S
Sbjct: 602  IMKYSKLEKLWEGTLPLGSLKKMNLLCSKNLKEIPDLSNARNLEELDLEGCESLVTLPSS 661

Query: 475  LL-------LH-NKLIILNMK-------------DCT------SLITLPGKI-------- 499
            +        LH + +I++++K             DC+       ++  P K+        
Sbjct: 662  IQNAIKLRKLHCSGVILIDLKSLEGMCNLEYLSVDCSRVEGTQGIVYFPSKLRLLLWNNC 721

Query: 500  -------------LMK-SLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEH 545
                         L+K  +E  +L+ L      L  L  + + G    +E P++   + +
Sbjct: 722  PLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLAI-N 780

Query: 546  LSELHL-EGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKL 604
            L E+ + +  ++   P S++    L+ L++ +C+ LE  P  + NL+ L  L L+GC  L
Sbjct: 781  LEEVDICKCESLVTFPSSMQNAIKLIYLDISDCKKLESFPTDL-NLESLEYLNLTGCPNL 839

Query: 605  KKFPEIVRSMKDLSELFLDGTS---------IKEVPSSIELLTKLELLNLSDCKNLVRLP 655
            + FP I     D+   F +G +          K +P+ ++ L         DC  L+R  
Sbjct: 840  RNFPAIKMGCSDVD--FPEGRNEIVVEDCFWNKNLPAGLDYL---------DC--LMRCM 886

Query: 656  SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRK 715
                  + L  LN+  C+K E + E +  + SLEE+D+S +              NL   
Sbjct: 887  PCEFRPEYLVFLNVR-CYKHEKLWEGIQSLGSLEEMDLSESE-------------NLT-- 930

Query: 716  SVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITH 774
                ++P LS   +L+ L L +C  +   LPS IGNL  L  L + +      LPT + +
Sbjct: 931  ----EIPDLSKATNLKHLYLNNCKSLV-TLPSTIGNLQKLVRLEMKECTGLEVLPTDV-N 984

Query: 775  LSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCA-------SLVTLLDALKL--CKSDST 825
            LS L  ++L  C  L++ P +  +I+ + +   A       S  T L++L L  CKS  T
Sbjct: 985  LSSLETLDLSGCSSLRTFPLISKSIKWLYLENTAIEEILDLSKATKLESLILNNCKSLVT 1044

Query: 826  MIACLDSLK 834
            + + + +L+
Sbjct: 1045 LPSTIGNLQ 1053



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 215/458 (46%), Gaps = 58/458 (12%)

Query: 360  KAFSKMTNLRLLKI--CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
            K+   M NL  L +    ++   G+ Y  ++LRLL W   PLK L SN +++  +++ M 
Sbjct: 682  KSLEGMCNLEYLSVDCSRVEGTQGIVYFPSKLRLLLWNNCPLKRLHSNFKVEYLVKLRME 741

Query: 418  YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
             S + +LW G + L +LK M L  S+ L  +PD + A NLE++ +  C  L     S+  
Sbjct: 742  NSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLEEVDICKCESLVTFPSSMQN 801

Query: 478  HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
              KLI L++ DC  L + P  + ++SLE LNL   P                    R FP
Sbjct: 802  AIKLIYLDISDCKKLESFPTDLNLESLEYLNLTGCPN------------------LRNFP 843

Query: 538  EI------VEHMEHLSELHLEGTAI-RGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
             I      V+  E  +E+ +E     + LP  ++ L  L+      C   E  P  +  L
Sbjct: 844  AIKMGCSDVDFPEGRNEIVVEDCFWNKNLPAGLDYLDCLM-----RCMPCEFRPEYLVFL 898

Query: 591  KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCK 649
                      C K +K  E ++S+  L E+ L +  ++ E+P  +   T L+ L L++CK
Sbjct: 899  NV-------RCYKHEKLWEGIQSLGSLEEMDLSESENLTEIPD-LSKATNLKHLYLNNCK 950

Query: 650  NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA-------VPHST 702
            +LV LPS+I  L+ L  L +  C  LE +P  +  + SLE LD+SG +       +  S 
Sbjct: 951  SLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDV-NLSSLETLDLSGCSSLRTFPLISKSI 1009

Query: 703  SWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK 762
             W        +  +   ++  LS    L  L L +C  +   LPS IGNL +L+ LY+ +
Sbjct: 1010 KWL------YLENTAIEEILDLSKATKLESLILNNCKSLV-TLPSTIGNLQNLRRLYMKR 1062

Query: 763  -NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
                  LPT + +LS L  ++L  C  L++ P +  NI
Sbjct: 1063 CTGLEVLPTDV-NLSSLGILDLSGCSSLRTFPLISTNI 1099



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 161/350 (46%), Gaps = 61/350 (17%)

Query: 375  NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKL 434
            N  LP GL+YL   +R +     P +F P  L          CY    +LW+GI+ L  L
Sbjct: 869  NKNLPAGLDYLDCLMRCM-----PCEFRPEYLVFLNV----RCYKH-EKLWEGIQSLGSL 918

Query: 435  KVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLIT 494
            + M LS SENL  +PD + A NL+ L L  C  L  +  ++    KL+ L MK+CT L  
Sbjct: 919  EEMDLSESENLTEIPDLSKATNLKHLYLNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEV 978

Query: 495  LPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT 554
            LP  + + SLE                  TLD+SG    R FP I + ++ L   +LE T
Sbjct: 979  LPTDVNLSSLE------------------TLDLSGCSSLRTFPLISKSIKWL---YLENT 1017

Query: 555  AIR-----------------------GLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
            AI                         LP +I  L  L  L +K C  LE+LP  V NL 
Sbjct: 1018 AIEEILDLSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDV-NLS 1076

Query: 592  CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
             L  L LSGCS L+ FP I     ++  L+L+ T+I EVP  IE  T+L +L +  C+ L
Sbjct: 1077 SLGILDLSGCSSLRTFPLIS---TNIVWLYLENTAIGEVPCCIEDFTRLRVLLMYCCQRL 1133

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHS 701
              +  +I  L+SL   + + C     V + L     +  ++ S + VP S
Sbjct: 1134 KNISPNIFRLRSLMFADFTDC---RGVIKALSDATVVATMEDSVSCVPLS 1180


>gi|297836995|ref|XP_002886379.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332220|gb|EFH62638.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1092

 Score =  306 bits (785), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 220/694 (31%), Positives = 358/694 (51%), Gaps = 83/694 (11%)

Query: 7   KLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKG-GL 65
           K+  L+D  + +V+M+ I G  G+GKTTIAR +  L+S++F+ + F+DN+R     G  +
Sbjct: 199 KMESLLDLDNDEVKMVAITGPAGIGKTTIARALQTLLSNKFQLTCFVDNLRGSYYNGLDV 258

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGS-----RLQRKKVLLVIDDVVDVKQLQSLA 120
           V LQ Q LS LL           DG+ +  S     RL +++VL+++DDV ++KQL +LA
Sbjct: 259 VRLQEQFLSNLLNQ---------DGLRIRHSGVIEERLCKQRVLIILDDVNNIKQLMALA 309

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
               WFG GSRI++T+ ++ LL+ HG+D +Y     + ++A+++    AF+         
Sbjct: 310 NETTWFGPGSRIVVTTENKELLQQHGIDNMYHVGFPSDEDAIKILCKYAFRKNSLYHGFK 369

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +L+ R+I     LPL L V+GS L G++ +EW   + +LE     +I ++L+I ++ L E
Sbjct: 370 KLAKRVIELCCNLPLGLCVVGSSLRGKNEEEWEQVIHKLETNLNQDIEEVLRIGYESLDE 429

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCL--ITVHNNTLWMHDLL 298
            E+ +FL IA FF   D D++             G+++L+ + L  I+ ++  + MH LL
Sbjct: 430 NEQSLFLHIAVFFNHKDGDHMKTMFAESDLDVKHGLKILVNRSLVEISTYDGRIMMHRLL 489

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           Q++G++ + +Q P    KR  L    ++C VL  +TGT  + GI  D     NEV +  S
Sbjct: 490 QQVGKKAIHKQEP---WKRKILLDAPDICDVLERATGTRAMSGISFD-ISGINEVSI--S 543

Query: 359 AKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK 410
            KAF +M NLR L++          + +P G+E+  +RLRLL W  YP K L      + 
Sbjct: 544 KKAFQRMPNLRFLRVYKSRVDGNDRVHIPEGMEF-PHRLRLLDWEEYPRKSLHPTFHPEY 602

Query: 411 TIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYE 470
            +E+    S++ +LW+G + L  LK + L+ S NL ++PD T A NLE+L L  C  L  
Sbjct: 603 LVELNFENSKLEKLWEGREVLTNLKKINLALSRNLKKLPDLTYATNLEELSLLRCESLEA 662

Query: 471 IHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGD 530
           I  S    +KL  L M  C S+  +P  + + SLE++++    +++  +  +ST      
Sbjct: 663 IPSSFSHLHKLHRLLMNSCISIEVIPAHMNLASLEQVSMAGC-SSLRNIPLMST------ 715

Query: 531 LKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
                         +++ L++  T +  LP SI L           C  LE L +T    
Sbjct: 716 --------------NITNLYISDTEVEYLPASIGL-----------CSRLEFLHIT---- 746

Query: 591 KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKN 650
              R+    G S L   P  +R++       L GT I+ +P  I+ L +LE L+LS+C+ 
Sbjct: 747 ---RNRNFKGLSHL---PTSLRTLN------LRGTDIERIPDCIKDLHRLETLDLSECRK 794

Query: 651 LV---RLPSSIIALKSLKTLNLSGCFKLENVPET 681
           L     LP S+ +L +    +L   F   N P T
Sbjct: 795 LASLPELPGSLSSLMARDCESLETVFCPMNTPNT 828



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 159/342 (46%), Gaps = 54/342 (15%)

Query: 569 LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSI 627
           LV LN +N + LE L      L  L+ + L+    LKK P++  +  +L EL  L   S+
Sbjct: 603 LVELNFENSK-LEKLWEGREVLTNLKKINLALSRNLKKLPDLTYAT-NLEELSLLRCESL 660

Query: 628 KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
           + +PSS   L KL  L ++ C ++  +P+ +  L SL+ ++++GC  L N+P     I +
Sbjct: 661 EAIPSSFSHLHKLHRLLMNSCISIEVIPAHM-NLASLEQVSMAGCSSLRNIPLMSTNITN 719

Query: 688 LEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCS-LRKLNLTDCNLMEG--A 744
           L    IS T V +                    LP+  GLCS L  L++T     +G   
Sbjct: 720 LY---ISDTEVEY--------------------LPASIGLCSRLEFLHITRNRNFKGLSH 756

Query: 745 LPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRV 804
           LP+      SL+ L L       +P  I  L +L  ++L +C++L SLP+LP ++  +  
Sbjct: 757 LPT------SLRTLNLRGTDIERIPDCIKDLHRLETLDLSECRKLASLPELPGSLSSLMA 810

Query: 805 NGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEA-VSNTRQHLSVV 863
             C SL T+   +    +      C             F + +E L A +  +   +  +
Sbjct: 811 RDCESLETVFCPMNTPNTRIDFTNC-------------FKLCQEALRASIQQSFFLVDAL 857

Query: 864 VPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
           +PG E+P  F ++ +G+S+T+  P N++  +    + +C +F
Sbjct: 858 LPGREMPAVFDHRAKGNSLTI--PPNVH--RSYSRFVVCVLF 895


>gi|8778469|gb|AAF79477.1|AC022492_21 F1L3.30 [Arabidopsis thaliana]
          Length = 1075

 Score =  306 bits (784), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 267/862 (30%), Positives = 426/862 (49%), Gaps = 102/862 (11%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M +  E L  L+D  S++V ++GI GMGG+GKT+I + +YD +S +F A  F++N++ +S
Sbjct: 187 MKAHMEGLNHLLDQESNEVLLVGIWGMGGIGKTSIVKCLYDQLSPKFPAHCFIENIKSVS 246

Query: 61  SKGG--LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
              G  L  LQ++LLS +L   D  +W+V  G   +  RL  +KV LV+D V  V Q+ +
Sbjct: 247 KDNGHDLKHLQKELLSSIL-CDDIRLWSVEAGCQEIKKRLGNQKVFLVLDGVDKVAQVHA 305

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFK-TYQPLQ 177
           LA  + WFG GSRIIIT+RD  LL T GV+ VY+   L+  +ALQ+F   AF+    P +
Sbjct: 306 LAKEKNWFGPGSRIIITTRDMGLLNTCGVEVVYEVKCLDDKDALQMFKQIAFEGGLPPCE 365

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSV--DEWRSTLERLEIEPPSEILDILQISF 235
              QLS R  + A GLP A++    FL GR+   +EW   L  LE      I++IL+IS+
Sbjct: 366 GFDQLSIRASKLAHGLPSAIQAYALFLRGRTASPEEWEEALGALESSLDENIMEILKISY 425

Query: 236 DGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWM 294
           +GL +  + +FL + C F G+    +T+ L G      + IRVL EK LI +  N ++ M
Sbjct: 426 EGLPKPHQNVFLHVVCLFNGDTLQRITSLLHGPIPQSSLWIRVLAEKSLIKISTNGSVIM 485

Query: 295 HDLLQELGQQIVQRQSPEELG-KRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
           H L++++G++I++    +++   R  L    E+   L    G E  E + L  +  +   
Sbjct: 486 HKLVEQMGREIIR----DDMSLARKFLRDPMEIRVALAFRDGGEQTECMCL--HTCDMTC 539

Query: 354 YLCASAKAFSKMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSN 405
            L   A    +M NL+ LK+         NLQL     +L   LRL  W  +PL+ LPS 
Sbjct: 540 VLSMEASVVGRMHNLKFLKVYKHVDYRESNLQLIPDQPFLPRSLRLFHWDAFPLRALPSG 599

Query: 406 LQMDKTIEIYMCYSRIGELWKGI------------KH--------------LDKLKVMIL 439
                 +E+ + +S +  LW G             KH              L  LK + +
Sbjct: 600 SDPCFLVELNLRHSDLETLWSGTPSNGVKTENPCEKHNSNYFHVLLYLAQMLKSLKRLDV 659

Query: 440 SHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI 499
           + S++L ++PD +   +LE+L+LE CTRL  I   +   + L  L +       +     
Sbjct: 660 TGSKHLKQLPDLSSITSLEELLLEQCTRLEGIPECIGKRSTLKKLKLSYRGGRRSALRFF 719

Query: 500 LMKSLEKLNLK-SLPTTISGLKCLSTLDVSGDLKFR---EFPEIVEHMEHLSELHLEGTA 555
           L KS  + ++    P     +  L  + + GD+ F    +F    E++   SE       
Sbjct: 720 LRKSTRQQHIGLEFPDAKVKMDALINISIGGDITFEFRSKFRGYAEYVSFNSEQQ----- 774

Query: 556 IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS---NLKCLRSLKLSGCSKLKKFP-EIV 611
                  I ++S +         SL+  P  +S       LR ++ S     + F  ++ 
Sbjct: 775 -------IPIISAM---------SLQQAPWVISECNRFNSLRIMRFSHKENGESFSFDVF 818

Query: 612 RSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSG 671
               DL EL L   +I+++PS I  L  LE L+LS   +   LP ++ +L  LKTL L  
Sbjct: 819 PDFPDLKELKLVNLNIRKIPSGICHLDLLEKLDLSG-NDFENLPEAMSSLSRLKTLWLQN 877

Query: 672 CFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLS---GLC 728
           CFKL+ +P+ L Q+++L   +                  NL  +S+A KL + S   G  
Sbjct: 878 CFKLQELPK-LTQVQTLTLTNCR----------------NL--RSLA-KLSNTSQDEGRY 917

Query: 729 SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKR 788
            L +L L +C  +E +L   + +   L  L LS + F +LP+SI  L+ L+ + L +CK+
Sbjct: 918 CLLELCLENCKSVE-SLSDQLSHFTKLTCLDLSNHDFETLPSSIRDLTSLVTLCLNNCKK 976

Query: 789 LQSLPQLPPNIRQVRVNGCASL 810
           L+S+ +LP +++ +  +GC SL
Sbjct: 977 LKSVEKLPLSLQFLDAHGCDSL 998


>gi|15222556|ref|NP_176571.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12325008|gb|AAG52450.1|AC010852_7 putative disease resistance protein; 28811-33581 [Arabidopsis
           thaliana]
 gi|332196041|gb|AEE34162.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1031

 Score =  306 bits (784), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 220/699 (31%), Positives = 364/699 (52%), Gaps = 77/699 (11%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-- 58
           +++   ++  L+D     V+M+GI G  G+GKTTIAR +   +S++F+ + F+DN++E  
Sbjct: 193 LEAHLTEMESLLDLDYDGVKMVGISGPAGIGKTTIARALQSRLSNKFQLTCFVDNLKESF 252

Query: 59  ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGS-----RLQRKKVLLVIDDVVDV 113
           ++S   L  LQ Q L+++L           DGI +  S     RL +++VL+++DDV  +
Sbjct: 253 LNSLDEL-RLQEQFLAKVLN---------HDGIRICHSGVIEERLCKQRVLIILDDVNHI 302

Query: 114 KQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY 173
            QL++LA    WFGSGSRI++T+ ++ +L+ HG++++Y     + ++A ++    AF+  
Sbjct: 303 MQLEALANETTWFGSGSRIVVTTENKEILQQHGINDLYHVGFPSDEQAFEILCRYAFRKT 362

Query: 174 QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLE-IEPPSEILDILQ 232
                  +L+ R+ +  G LPL L VLGS L G++ +EW   + RLE I    +I ++L+
Sbjct: 363 TLSHGFEKLARRVTKLCGNLPLGLRVLGSSLRGKNEEEWEEVIRRLETILDHQDIEEVLR 422

Query: 233 ISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-T 291
           + +  L E E+ +FL IA FF   D D V             G+++L +K LI + NN  
Sbjct: 423 VGYGSLHENEQSLFLHIAVFFNYTDGDLVKAMFTDNNLDIKHGLKILADKSLINISNNRE 482

Query: 292 LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
           + +H LLQ+ G+Q V ++ P    K   L    E+C VL  +TGT+ + GI  D     +
Sbjct: 483 IVIHKLLQQFGRQAVHKEEP---WKHKILIHAPEICDVLEYATGTKAMSGISFD-ISGVD 538

Query: 352 EVYLCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLP 403
           EV +  S K+F ++ NLR LK+          + +P   E+   RLRLL W  YP K LP
Sbjct: 539 EVVI--SGKSFKRIPNLRFLKVFKSRDDGNDRVHIPEETEF-PRRLRLLHWEAYPCKSLP 595

Query: 404 SNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
              Q    +E+YM  S++ +LW+G + L  LK M L  S +L  +PD + A NLE++ L 
Sbjct: 596 PTFQPQYLVELYMPSSQLEKLWEGTQRLTHLKKMNLFASRHLKELPDLSNATNLERMDLS 655

Query: 464 GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLS 523
            C  L EI  S    +KL  L M +C +L  +P  + + SLE +N++             
Sbjct: 656 YCESLVEIPSSFSHLHKLEWLEMNNCINLQVIPAHMNLASLETVNMR------------- 702

Query: 524 TLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNC---RSL 580
                G  + R  P +     ++++L++  TA+ G+P SI   S L  L++ +    + +
Sbjct: 703 -----GCSRLRNIPVM---STNITQLYVSRTAVEGMPPSIRFCSRLERLSISSSGKLKGI 754

Query: 581 EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG----TSIKEVPSSIEL 636
             LP+++  L  +        S ++  PE ++S+  L  L L G     S+ E+PSS+  
Sbjct: 755 THLPISLKQLDLID-------SDIETIPECIKSLHLLYILNLSGCRRLASLPELPSSLRF 807

Query: 637 LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
           L         DC++L  +   +   K+   LN + CFKL
Sbjct: 808 LMA------DDCESLETVFCPLNTPKA--ELNFTNCFKL 838



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 167/372 (44%), Gaps = 58/372 (15%)

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
           PE  E    L  LH E    + LP + +    LV L + + + LE L      L  L+ +
Sbjct: 572 PEETEFPRRLRLLHWEAYPCKSLPPTFQP-QYLVELYMPSSQ-LEKLWEGTQRLTHLKKM 629

Query: 597 KLSGCSKLKKFPEIVRSMK----DLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV 652
            L     LK+ P++  +      DLS       S+ E+PSS   L KLE L +++C NL 
Sbjct: 630 NLFASRHLKELPDLSNATNLERMDLSYC----ESLVEIPSSFSHLHKLEWLEMNNCINLQ 685

Query: 653 RLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINL 712
            +P+ +  L SL+T+N+ GC +L N+P     I    +L +S TAV         +P   
Sbjct: 686 VIPAHM-NLASLETVNMRGCSRLRNIPVMSTNIT---QLYVSRTAV-------EGMP--- 731

Query: 713 MRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSI 772
                    PS+     L +L+++    ++G     I    SLK+L L  +   ++P  I
Sbjct: 732 ---------PSIRFCSRLERLSISSSGKLKGITHLPI----SLKQLDLIDSDIETIPECI 778

Query: 773 THLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDS 832
             L  L  + L  C+RL SLP+LP ++R +  + C SL T+   L   K++     C   
Sbjct: 779 KSLHLLYILNLSGCRRLASLPELPSSLRFLMADDCESLETVFCPLNTPKAELNFTNCFK- 837

Query: 833 LKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYN 892
              LG ++            V  +    + ++PG E+P  F +Q +G+++T+ RP     
Sbjct: 838 ---LGQQA--------QRAIVQRSLLLGTTLLPGRELPAEFDHQGKGNTLTI-RPG---- 881

Query: 893 KKKLVGYAICCV 904
                G+ +C V
Sbjct: 882 ----TGFVVCIV 889


>gi|298953303|gb|ADI99936.1| TIR-CC-NBS-AAA+ATPase class resistance protein [Cucumis sativus]
          Length = 991

 Score =  306 bits (784), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 214/620 (34%), Positives = 337/620 (54%), Gaps = 36/620 (5%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK-GGLVSLQRQLLS 74
           S+++ M+G+ G+GG+GKTT+A+ +Y+ IS +FE   FL NVRE S++  GLV LQ+ L+ 
Sbjct: 209 SNEITMVGLYGIGGMGKTTLAKALYNKISDDFEGCCFLANVREASNQYRGLVELQKTLIR 268

Query: 75  QLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIII 134
           ++L      + NV  GI ++  RL  KK++L++DD+   +QLQ+LAG  +WFG GS++I 
Sbjct: 269 EILMDDSIKVSNVGIGISIIRDRLCSKKIILILDDIDTHEQLQALAGGHDWFGHGSKVIA 328

Query: 135 TSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLP 194
           T+R++ LL +HG + + + +GLN  E L+LF+  AFK   P  + + +S R + Y  GLP
Sbjct: 329 TTRNKQLLASHGFNILKRVNGLNAIEGLELFSWHAFKNSHPSSDYLDVSKRAVHYCKGLP 388

Query: 195 LALEVLGSFLSGRSVDEWRSTLERLEIEPPSEIL-----DILQISFDGLQELEKKIFLDI 249
           LALEVLGSFL+  S+D+ +S  ER+  E  +  L     DIL+IS+D L++  K+IFL I
Sbjct: 389 LALEVLGSFLN--SIDD-QSKFERILDEYENSYLDKGIQDILRISYDELEQDVKEIFLYI 445

Query: 250 ACFFKGNDRDYVTNFLEGCG--FHPVIGIRVLIEKCLITVHN-NTLWMHDLLQELGQQIV 306
           +C F   D++ V   L+ C   F   +GI+ L +  L+T+   N + MHDL+Q++G  I 
Sbjct: 446 SCCFVHEDKNEVQMMLKECDSRFRLEMGIKKLTDLSLLTIDKFNRVEMHDLIQQMGHTIH 505

Query: 307 QRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMT 366
             ++     KR RL  E++V  VL        V+ I L N+H   E  L   ++ F K+ 
Sbjct: 506 LLETSNS-HKRKRLLFEKDVMDVLNGDMEARAVKVIKL-NFHQPTE--LDIDSRGFEKVK 561

Query: 367 NLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWK 426
           NL +LK+ N+     LEYL + LR + W  +P   LPS   ++K  E+ M  S I     
Sbjct: 562 NLVVLKVHNVTSSKSLEYLPSSLRWMIWPKFPFSSLPSTYSLEKLTELSMPSSFIKHFGN 621

Query: 427 GIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNM 486
           G  +   LK + L++S+ L  + D + A NLE+L L  C +L  +H S+    KL  L +
Sbjct: 622 GYLNCKWLKRINLNYSKFLEEISDLSSAINLEELNLSECKKLVRVHESVGSLGKLAKLEL 681

Query: 487 KDCTSLIT-LPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHME- 544
               +  T  P  + +KSL+KL +       S                  +P   E M+ 
Sbjct: 682 SSHPNGFTQFPSNLKLKSLQKLVMYECRIVES------------------YPHFSEEMKS 723

Query: 545 HLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKL 604
            L EL ++  ++  L  +I  L+GL  L +  C+ L  LP  +   + +  +   GC  L
Sbjct: 724 SLKELRIQSCSVTKLSPTIGNLTGLQHLWIDVCKELTTLPKILKVPEGVIYMNAQGCRSL 783

Query: 605 KKFPEIVRSMKDLSELFLDG 624
            +FP+ +         ++DG
Sbjct: 784 ARFPDNIAEFISCDSEYVDG 803



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 201/472 (42%), Gaps = 91/472 (19%)

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLL---NLKNCRSLEIL 583
           ++GD++ R    I  +    +EL ++    RG     E +  LV+L   N+ + +SLE L
Sbjct: 528 LNGDMEARAVKVIKLNFHQPTELDIDS---RGF----EKVKNLVVLKVHNVTSSKSLEYL 580

Query: 584 PVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELL 643
           P   S+L+ +   K    S    +     S++ L+EL +  + IK   +       L+ +
Sbjct: 581 P---SSLRWMIWPKFPFSSLPSTY-----SLEKLTELSMPSSFIKHFGNGYLNCKWLKRI 632

Query: 644 NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTS 703
           NL+  K L  + S + +  +L+ LNLS C KL  V E++G +  L +L++S    P+   
Sbjct: 633 NLNYSKFLEEI-SDLSSAINLEELNLSECKKLVRVHESVGSLGKLAKLELSSH--PNG-- 687

Query: 704 WYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKN 763
            ++  P NL  KS             L+KL + +C ++E           SLKEL +   
Sbjct: 688 -FTQFPSNLKLKS-------------LQKLVMYECRIVESYPHFSEEMKSSLKELRIQSC 733

Query: 764 SFVSLPTSITHLSKLLNIELEDCKRLQSLPQL---PPNIRQVRVNGCASLVTLLDALKLC 820
           S   L  +I +L+ L ++ ++ CK L +LP++   P  +  +   GC SL    D +   
Sbjct: 734 SVTKLSPTIGNLTGLQHLWIDVCKELTTLPKILKVPEGVIYMNAQGCRSLARFPDNI--- 790

Query: 821 KSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGS 880
              +  I+C DS                  E V    + L +++   +IPEWF +++  +
Sbjct: 791 ---AEFISC-DS------------------EYVDGKYKQL-ILMNNCDIPEWFHFKSTNN 827

Query: 881 SITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRD 940
           SIT     N Y   KL   A C    V     G +  G      L C        + F+D
Sbjct: 828 SITFPTTFN-YPGWKLKVLAACVKVQVHDPVNGYHRGG-----DLECE-------VFFKD 874

Query: 941 KFGQAGSDHLWLLYLSRQTCYDIR-LPLESNLEPFE-----SNHVNVSFEPW 986
               +  D  W  YL     YD R LPL ++   +      + H + S + W
Sbjct: 875 ILVWSSGD--WTNYLG----YDSRWLPLGASPSEYTWFIVLNPHRDFSLDDW 920


>gi|30692215|ref|NP_850655.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644403|gb|AEE77924.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1240

 Score =  306 bits (783), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 253/772 (32%), Positives = 376/772 (48%), Gaps = 96/772 (12%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MD   + LR  +D    +VR+IGI G  G+GKTTIAR + + +S  F+ S  + N++   
Sbjct: 275  MDMLEQLLRLDLD----EVRIIGIWGPPGIGKTTIARFLLNQVSDRFQLSAIMVNIKGCY 330

Query: 61   SK------GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
             +         + LQ Q+LSQ++   D  I      + +   RL+ KKV LV+D+V  + 
Sbjct: 331  PRPCFDEYSAQLQLQNQMLSQMINHKDIMI----SHLGVAQERLRDKKVFLVLDEVDQLG 386

Query: 115  QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
            QL +LA    WFG GSRIIIT+ D  +LK HG++ VYK    + DEA Q+F M AF   Q
Sbjct: 387  QLDALAKETRWFGPGSRIIITTEDLGVLKAHGINHVYKVEYPSNDEAFQIFCMNAFGQKQ 446

Query: 175  PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
            P +   +++  +   AG LPL L+VLGS L G+S  EW  TL RL      +I  I+Q S
Sbjct: 447  PHEGFDEIAWEVKALAGKLPLGLKVLGSALRGKSKPEWERTLPRLRTSLDGKIGGIIQFS 506

Query: 235  FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLW- 293
            +D L + +K +FL IAC F G     V   L G       G+ VL +K LI+      W 
Sbjct: 507  YDALCDEDKYLFLYIACLFNGESTTKVKELL-GKFLDVRQGLHVLAQKSLISFDEEISWK 565

Query: 294  --------------------------MHDLLQELGQQIVQRQ-SPEELGKRSRLWKEEEV 326
                                      MH LL++ G++  ++Q       K   L  E ++
Sbjct: 566  QIVQVLLLNKFSHVRHTKRNKSQIIRMHTLLEQFGRETSRKQFVHHRYTKHQLLVGERDI 625

Query: 327  CHVL-TESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKIC--------NLQ 377
            C VL  ++T      GI LD Y +E E+ +  S KA  ++ + + +KI          +Q
Sbjct: 626  CEVLDDDTTDNRRFIGINLDLYKNEEELNI--SEKALERIHDFQFVKINYVFTHQPERVQ 683

Query: 378  LP-NGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKV 436
            L    L Y S R+R L W  Y    LPS    +  +E+ M  S++ +LW+G K L  LK 
Sbjct: 684  LALEDLIYHSPRIRSLKWFPYQNICLPSTFNPEFLVELDMRCSKLRKLWEGTKQLRNLKW 743

Query: 437  MILSHSENLIRMP-DFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITL 495
            M LS S +L  +P       +L+ L L  C+ L ++ PS+  +N L  L++ +C+ ++ L
Sbjct: 744  MDLSDSRDLKELPSSIEKLTSLQILDLRDCSSLVKLPPSINANN-LQGLSLTNCSRVVKL 802

Query: 496  PGKILMKSLEKLNLKS------LPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSEL 549
            P    + +L +L L++      LP +I     L  LD+ G     + P  +  M +L E 
Sbjct: 803  PAIENVTNLHQLKLQNCSSLIELPLSIGTANNLWKLDIRGCSSLVKLPSSIGDMTNLKEF 862

Query: 550  HLEGTA-IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
             L   + +  LP SI  L  L +L ++ C  LE LP  + NL  LR L L+ CS+LK FP
Sbjct: 863  DLSNCSNLVELPSSIGNLQKLFMLRMRGCSKLETLPTNI-NLISLRILDLTDCSQLKSFP 921

Query: 609  EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSS----------- 657
            EI      +SEL L GT+IKEVP SI   ++L +  +S  ++L   P +           
Sbjct: 922  EIS---THISELRLKGTAIKEVPLSITSWSRLAVYEMSYFESLKEFPHALDIITDLLLVS 978

Query: 658  ---------IIALKSLKTLNLSGC---FKLENVPETLGQI-----ESLEELD 692
                     +  +  L+ L L+ C     L  +P++L  I     +SLE LD
Sbjct: 979  EDIQEVPPWVKRMSRLRALRLNNCNSLVSLPQLPDSLDYIYADNCKSLERLD 1030



 Score =  105 bits (262), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 182/378 (48%), Gaps = 58/378 (15%)

Query: 532  KFREFPEIVEHMEHLSELHL-EGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
            K R+  E  + + +L  + L +   ++ LP SIE L+ L +L+L++C SL  LP ++ N 
Sbjct: 727  KLRKLWEGTKQLRNLKWMDLSDSRDLKELPSSIEKLTSLQILDLRDCSSLVKLPPSI-NA 785

Query: 591  KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCK 649
              L+ L L+ CS++ K P I  ++ +L +L L   +S+ E+P SI     L  L++  C 
Sbjct: 786  NNLQGLSLTNCSRVVKLPAI-ENVTNLHQLKLQNCSSLIELPLSIGTANNLWKLDIRGCS 844

Query: 650  NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIP 709
            +LV+LPSSI  + +LK  +LS C  L  +P ++G ++ L  L + G +   +        
Sbjct: 845  SLVKLPSSIGDMTNLKEFDLSNCSNLVELPSSIGNLQKLFMLRMRGCSKLET-------- 896

Query: 710  INLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLP 769
                       LP+   L SLR L+LTDC+ ++ + P +I     + EL L   +   +P
Sbjct: 897  -----------LPTNINLISLRILDLTDCSQLK-SFP-EIST--HISELRLKGTAIKEVP 941

Query: 770  TSITHLSKLLNIELEDCKRLQSLP-----------------QLPP------NIRQVRVNG 806
             SIT  S+L   E+   + L+  P                 ++PP       +R +R+N 
Sbjct: 942  LSITSWSRLAVYEMSYFESLKEFPHALDIITDLLLVSEDIQEVPPWVKRMSRLRALRLNN 1001

Query: 807  CASLVTL------LDALKL--CKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQ 858
            C SLV+L      LD +    CKS   +  C ++ ++       F + +E  + + +T  
Sbjct: 1002 CNSLVSLPQLPDSLDYIYADNCKSLERLDCCFNNPEIRLYFPKCFKLNQEARDLIMHTST 1061

Query: 859  HLSVVVPGSEIPEWFMYQ 876
                ++P  ++P  F ++
Sbjct: 1062 RKYAMLPSIQVPACFNHR 1079


>gi|15230461|ref|NP_190049.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|30692207|ref|NP_850654.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|6967111|emb|CAB72465.1| disease resistance protein homolog [Arabidopsis thaliana]
 gi|28973753|gb|AAO64192.1| putative disease resistance protein homolog [Arabidopsis thaliana]
 gi|332644404|gb|AEE77925.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644405|gb|AEE77926.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1214

 Score =  306 bits (783), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 253/772 (32%), Positives = 376/772 (48%), Gaps = 96/772 (12%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            MD   + LR  +D    +VR+IGI G  G+GKTTIAR + + +S  F+ S  + N++   
Sbjct: 275  MDMLEQLLRLDLD----EVRIIGIWGPPGIGKTTIARFLLNQVSDRFQLSAIMVNIKGCY 330

Query: 61   SK------GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
             +         + LQ Q+LSQ++   D  I      + +   RL+ KKV LV+D+V  + 
Sbjct: 331  PRPCFDEYSAQLQLQNQMLSQMINHKDIMI----SHLGVAQERLRDKKVFLVLDEVDQLG 386

Query: 115  QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
            QL +LA    WFG GSRIIIT+ D  +LK HG++ VYK    + DEA Q+F M AF   Q
Sbjct: 387  QLDALAKETRWFGPGSRIIITTEDLGVLKAHGINHVYKVEYPSNDEAFQIFCMNAFGQKQ 446

Query: 175  PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
            P +   +++  +   AG LPL L+VLGS L G+S  EW  TL RL      +I  I+Q S
Sbjct: 447  PHEGFDEIAWEVKALAGKLPLGLKVLGSALRGKSKPEWERTLPRLRTSLDGKIGGIIQFS 506

Query: 235  FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLW- 293
            +D L + +K +FL IAC F G     V   L G       G+ VL +K LI+      W 
Sbjct: 507  YDALCDEDKYLFLYIACLFNGESTTKVKELL-GKFLDVRQGLHVLAQKSLISFDEEISWK 565

Query: 294  --------------------------MHDLLQELGQQIVQRQ-SPEELGKRSRLWKEEEV 326
                                      MH LL++ G++  ++Q       K   L  E ++
Sbjct: 566  QIVQVLLLNKFSHVRHTKRNKSQIIRMHTLLEQFGRETSRKQFVHHRYTKHQLLVGERDI 625

Query: 327  CHVL-TESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKIC--------NLQ 377
            C VL  ++T      GI LD Y +E E+ +  S KA  ++ + + +KI          +Q
Sbjct: 626  CEVLDDDTTDNRRFIGINLDLYKNEEELNI--SEKALERIHDFQFVKINYVFTHQPERVQ 683

Query: 378  LP-NGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKV 436
            L    L Y S R+R L W  Y    LPS    +  +E+ M  S++ +LW+G K L  LK 
Sbjct: 684  LALEDLIYHSPRIRSLKWFPYQNICLPSTFNPEFLVELDMRCSKLRKLWEGTKQLRNLKW 743

Query: 437  MILSHSENLIRMP-DFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITL 495
            M LS S +L  +P       +L+ L L  C+ L ++ PS+  +N L  L++ +C+ ++ L
Sbjct: 744  MDLSDSRDLKELPSSIEKLTSLQILDLRDCSSLVKLPPSINANN-LQGLSLTNCSRVVKL 802

Query: 496  PGKILMKSLEKLNLKS------LPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSEL 549
            P    + +L +L L++      LP +I     L  LD+ G     + P  +  M +L E 
Sbjct: 803  PAIENVTNLHQLKLQNCSSLIELPLSIGTANNLWKLDIRGCSSLVKLPSSIGDMTNLKEF 862

Query: 550  HLEGTA-IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
             L   + +  LP SI  L  L +L ++ C  LE LP  + NL  LR L L+ CS+LK FP
Sbjct: 863  DLSNCSNLVELPSSIGNLQKLFMLRMRGCSKLETLPTNI-NLISLRILDLTDCSQLKSFP 921

Query: 609  EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSS----------- 657
            EI      +SEL L GT+IKEVP SI   ++L +  +S  ++L   P +           
Sbjct: 922  EI---STHISELRLKGTAIKEVPLSITSWSRLAVYEMSYFESLKEFPHALDIITDLLLVS 978

Query: 658  ---------IIALKSLKTLNLSGC---FKLENVPETLGQI-----ESLEELD 692
                     +  +  L+ L L+ C     L  +P++L  I     +SLE LD
Sbjct: 979  EDIQEVPPWVKRMSRLRALRLNNCNSLVSLPQLPDSLDYIYADNCKSLERLD 1030



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 182/378 (48%), Gaps = 58/378 (15%)

Query: 532  KFREFPEIVEHMEHLSELHL-EGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
            K R+  E  + + +L  + L +   ++ LP SIE L+ L +L+L++C SL  LP ++ N 
Sbjct: 727  KLRKLWEGTKQLRNLKWMDLSDSRDLKELPSSIEKLTSLQILDLRDCSSLVKLPPSI-NA 785

Query: 591  KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCK 649
              L+ L L+ CS++ K P I  ++ +L +L L   +S+ E+P SI     L  L++  C 
Sbjct: 786  NNLQGLSLTNCSRVVKLPAI-ENVTNLHQLKLQNCSSLIELPLSIGTANNLWKLDIRGCS 844

Query: 650  NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIP 709
            +LV+LPSSI  + +LK  +LS C  L  +P ++G ++ L  L + G +   +        
Sbjct: 845  SLVKLPSSIGDMTNLKEFDLSNCSNLVELPSSIGNLQKLFMLRMRGCSKLET-------- 896

Query: 710  INLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLP 769
                       LP+   L SLR L+LTDC+ ++ + P +I     + EL L   +   +P
Sbjct: 897  -----------LPTNINLISLRILDLTDCSQLK-SFP-EIST--HISELRLKGTAIKEVP 941

Query: 770  TSITHLSKLLNIELEDCKRLQSLP-----------------QLPP------NIRQVRVNG 806
             SIT  S+L   E+   + L+  P                 ++PP       +R +R+N 
Sbjct: 942  LSITSWSRLAVYEMSYFESLKEFPHALDIITDLLLVSEDIQEVPPWVKRMSRLRALRLNN 1001

Query: 807  CASLVTL------LDALKL--CKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQ 858
            C SLV+L      LD +    CKS   +  C ++ ++       F + +E  + + +T  
Sbjct: 1002 CNSLVSLPQLPDSLDYIYADNCKSLERLDCCFNNPEIRLYFPKCFKLNQEARDLIMHTST 1061

Query: 859  HLSVVVPGSEIPEWFMYQ 876
                ++P  ++P  F ++
Sbjct: 1062 RKYAMLPSIQVPACFNHR 1079


>gi|359495256|ref|XP_002272078.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1130

 Score =  306 bits (783), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 222/610 (36%), Positives = 318/610 (52%), Gaps = 97/610 (15%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M+ R +KL  L++     V MIGI G+ G+GKTTIA+ +Y+ IS+ F+++ FL NV E +
Sbjct: 194 MEFRLKKLLSLINLKLDKVLMIGINGISGIGKTTIAKAIYNKISYHFQSTIFLTNVGE-N 252

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           S+G  ++L      Q  +L D++       I   G R + K+VLLV+DDV  + Q++ L 
Sbjct: 253 SRGHHLNL-----PQFQQLLDDA------SIGTYG-RTKNKRVLLVVDDVDRLSQVEYLV 300

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
             R+ F   SRII T+RD HLL    +D  Y+  GL ++EA+ LF+  AFK   P ++ V
Sbjct: 301 KLRDSFSLRSRIIFTTRDRHLLNVAKLDASYESKGLTHEEAIHLFSWHAFKQTFPKEDYV 360

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            L   ++ Y  G PLAL+VLGS L G+++ EW+  L +L      EI + L++SFDGL  
Sbjct: 361 GLVNHVVGYVKGHPLALKVLGSSLFGKTITEWKCILHKLRKNTHGEIYNELKVSFDGLTP 420

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            E++IFL + C  KG D + V+  L+  G     GI+VL + CL T+ NN L+MHDLLQ+
Sbjct: 421 TEQEIFLKVVCLLKGKDEESVSTILDSLGLGSESGIQVLHDMCLATISNNKLYMHDLLQQ 480

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +GQ+++   +P E  KRSRL   ++V   LT +TGTE ++ I               S+ 
Sbjct: 481 MGQKLIDENNPHEPSKRSRLQDSKDVYPRLTRNTGTEEIQKIQF-------------SSA 527

Query: 361 AFSKMTNLRLLKICNLQ-LPNG--------LEYLSNRLRLLGWRGY-------------- 397
            F KM  L  L    L+ LP          L++  + +R L    Y              
Sbjct: 528 GFLKMPKLYSLMHLPLKSLPPNFPGDSLIFLDWSRSNIRQLWKDEYPRLTRNTGTEAIQK 587

Query: 398 -------PLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD 450
                  PLK LP N   D  I + +  S I +LWKG K L  LKVM LS+ +NL+++  
Sbjct: 588 LLSPMHLPLKSLPPNFPGDSLILLDLSRSNIRQLWKGNKSLGNLKVMNLSYCQNLVKISK 647

Query: 451 FTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK 510
           F   P L+ L L+GC +                                         L+
Sbjct: 648 FPSMPALKILRLKGCKK-----------------------------------------LR 666

Query: 511 SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLV 570
           SLP++I  LKCL  L  SG      FPEI E ME+L ELHL+ TAI+ LP SI  L+ L 
Sbjct: 667 SLPSSICELKCLECLWCSGCSNLEAFPEITEKMENLKELHLDETAIKELPSSIYHLTALE 726

Query: 571 LLNLKNCRSL 580
            LNL++C++L
Sbjct: 727 FLNLEHCKNL 736



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 94/421 (22%), Positives = 159/421 (37%), Gaps = 138/421 (32%)

Query: 620  LFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVP 679
            L L  ++I+++    + L  L+++NLS C+NLV++ S   ++ +LK L L GC KL ++P
Sbjct: 611  LDLSRSNIRQLWKGNKSLGNLKVMNLSYCQNLVKI-SKFPSMPALKILRLKGCKKLRSLP 669

Query: 680  ETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCN 739
             ++ +++ LE L  SG                                          C+
Sbjct: 670  SSICELKCLECLWCSG------------------------------------------CS 687

Query: 740  LMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
             +E A P     + +LKEL+L + +   LP+SI HL+ L  + LE CK L S        
Sbjct: 688  NLE-AFPEITEKMENLKELHLDETAIKELPSSIYHLTALEFLNLEHCKNLGS-------- 738

Query: 800  RQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQH 859
                             L+ C      + C ++                  E  S   + 
Sbjct: 739  ----------------ELRSC------LPCPEN------------------EPPSCVSRE 758

Query: 860  LSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNC-- 916
              + + GS+ IPEW   Q  G ++    P N Y +K  +G+ +C V+  L  + G+    
Sbjct: 759  FDIFISGSQRIPEWISCQM-GCAVKTELPMNWYEQKGFLGFVLCSVYVPLDTASGHESEN 817

Query: 917  ---------------------FGSYP-----THQLNCHIGHGIYGIGF--------RDKF 942
                                 F + P     T +L C +   I  + F           F
Sbjct: 818  TFDDISQNEYAHTSKNESEDEFENSPVDATRTCRLECKLTDQIGEVDFLAFGPTLCEYYF 877

Query: 943  GQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWL-GQGLEVKMCGLHPV 1001
                S  +W+ Y         ++ L+      E +H   SF+ +  G  L+VK CG++ +
Sbjct: 878  NGGPSKQVWIRYYP-------KVALKKKYFSNEWSHSIASFKGYHNGTPLKVKECGVYLI 930

Query: 1002 Y 1002
            Y
Sbjct: 931  Y 931



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 94/210 (44%), Gaps = 44/210 (20%)

Query: 501 MKSLEKLNLKSLPTTISGLKCLSTLDVSG----DLKFREFPEIVEH------MEHLSELH 550
           + SL  L LKSLP    G   L  LD S      L   E+P +  +       + LS +H
Sbjct: 535 LYSLMHLPLKSLPPNFPG-DSLIFLDWSRSNIRQLWKDEYPRLTRNTGTEAIQKLLSPMH 593

Query: 551 LEGTAIRGLPLSIELLSGLVLLNLK--NCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
           L    ++ LP +    S L+LL+L   N R L     ++ NLK +    LS C  L K  
Sbjct: 594 L---PLKSLPPNFPGDS-LILLDLSRSNIRQLWKGNKSLGNLKVMN---LSYCQNLVK-- 644

Query: 609 EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
                             I + PS    +  L++L L  CK L  LPSSI  LK L+ L 
Sbjct: 645 ------------------ISKFPS----MPALKILRLKGCKKLRSLPSSICELKCLECLW 682

Query: 669 LSGCFKLENVPETLGQIESLEELDISGTAV 698
            SGC  LE  PE   ++E+L+EL +  TA+
Sbjct: 683 CSGCSNLEAFPEITEKMENLKELHLDETAI 712


>gi|297791255|ref|XP_002863512.1| hypothetical protein ARALYDRAFT_356517 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309347|gb|EFH39771.1| hypothetical protein ARALYDRAFT_356517 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 991

 Score =  306 bits (783), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 241/691 (34%), Positives = 375/691 (54%), Gaps = 62/691 (8%)

Query: 12  MDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL--VSLQ 69
           ++   ++ R++ + GMGG+GKT +A+ + + +  +  +  F+++VRE S   G   + LQ
Sbjct: 69  VECNDNETRIVAVVGMGGIGKTFLAKKLLEKLKRKIGSHVFIESVRETSKAHGFDKLKLQ 128

Query: 70  RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG 129
           + L+  LL   D  I +  + +++    L +KKV +V+DDV   +Q+ +L GN +W   G
Sbjct: 129 KTLVDGLLPNED-IICDNENPLEVWKDHLLKKKVAVVLDDVHGKEQVNALLGNCDWIKKG 187

Query: 130 SRIIITSRDEHLLK-THGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC--VQLSARI 186
           SRIIIT+RD+ LLK    V ++Y+  G N  ++L+LF+  AF      + C  ++LS + 
Sbjct: 188 SRIIITTRDKSLLKGVEMVSDIYEVPGFNDSDSLELFSTYAFDD----KSCKFMELSRKF 243

Query: 187 IRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIF 246
           + Y GG PLAL+ LG  L G+    W + L  L      +I   L +S+D L E +K +F
Sbjct: 244 VDYTGGNPLALKALGEELLGKDKGHWEARLVTLTQRSNEKIRKELILSYDELNEHQKDVF 303

Query: 247 LDIACFFKGNDRDYVTNFLEGCGFHPVIG-----IRVLIEKCLITVHNNTLWMHDLLQEL 301
           LDIACFF+  D +Y+   L  C F    G     +R L +K LI +  + + M+DL+  L
Sbjct: 304 LDIACFFRSQDENYIKTLLH-CSFDAESGEAGKEVRELSDKFLIRISEDRVEMNDLIYTL 362

Query: 302 GQQIVQRQSPEELGKRSRLW--KEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           G+++      E +  + RL     EE  + L      + + GI LD    E E+ L    
Sbjct: 363 GRELAI-SCVETIAGKYRLLPSNREEFINALKNKEERDKIRGIFLDMSKME-EIPL--DY 418

Query: 360 KAFSKMTNLRLLKICN------------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
           KAF  M+NLR LK+ N            L LP+GLE+    +R   W  +P++ LP +L 
Sbjct: 419 KAFVGMSNLRYLKVYNSHCPRQCEADSKLNLPDGLEFPICNVRYFHWLKFPVEELPCDLD 478

Query: 408 MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
               I++ + YS+I ++W   K   +LK + LSHS  L  +   + APNL +L LEGCT 
Sbjct: 479 PKNLIDLKLHYSQIRQVWTSDKATPRLKWVDLSHSSKLSSLLGLSKAPNLLRLNLEGCTS 538

Query: 468 LYEIHPSLLLHNK-LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLD 526
           L E+   +L + K LI+LN++ CT L++LP         K++L SL   I          
Sbjct: 539 LEELSGEILQNMKNLILLNLRGCTGLVSLP---------KISLCSLKILI---------- 579

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP-- 584
           +SG  KF++F  I E++E    L+L GTAI  LP S+  L  L+LL+LK+C++LE L   
Sbjct: 580 LSGCSKFQKFQVISENLE---TLYLNGTAIDRLPPSVGNLQRLILLDLKDCKNLETLSDC 636

Query: 585 VTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLN 644
             + N++ L+ LKLSGCSKLK FP   +++++L  L L+GT+I ++P +I  ++ L  L 
Sbjct: 637 TNLGNMRSLQELKLSGCSKLKSFP---KNIENLRNLLLEGTAITKMPQNINGMSLLRRLC 693

Query: 645 LSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
           LS    +  L  +   L  LK L L  C  L
Sbjct: 694 LSRSDEIYTLQFNTNELYHLKWLELMYCKNL 724



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 140/510 (27%), Positives = 227/510 (44%), Gaps = 89/510 (17%)

Query: 545  HLSELHLEG-TAIRGLPLSI-ELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
            +L  L+LEG T++  L   I + +  L+LLNL+ C  L  LP    +L  L+ L LSGCS
Sbjct: 527  NLLRLNLEGCTSLEELSGEILQNMKNLILLNLRGCTGLVSLPKI--SLCSLKILILSGCS 584

Query: 603  KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP--SSIIA 660
            K +KF  I    ++L  L+L+GT+I  +P S+  L +L LL+L DCKNL  L   +++  
Sbjct: 585  KFQKFQVI---SENLETLYLNGTAIDRLPPSVGNLQRLILLDLKDCKNLETLSDCTNLGN 641

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK 720
            ++SL+ L LSGC KL++ P+    IE+L  L + GTA+                     K
Sbjct: 642  MRSLQELKLSGCSKLKSFPKN---IENLRNLLLEGTAIT--------------------K 678

Query: 721  LP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLL 779
            +P +++G+  LR+L L+  +                 E+Y       +L  +   L  L 
Sbjct: 679  MPQNINGMSLLRRLCLSRSD-----------------EIY-------TLQFNTNELYHLK 714

Query: 780  NIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNK 839
             +EL  CK L SL  LPPN++ +  +GC SL T+   L L  S   + +   +       
Sbjct: 715  WLELMYCKNLTSLLGLPPNLQFLYAHGCTSLKTVSSPLALLISTEQIHS---TFIFTNCH 771

Query: 840  SLAFSMLREYLEAVSNTRQHLSVVVPGSEIPE-WFMYQNEGSSITVTRPSNLYNKKKLVG 898
             L      + + ++ NTR   S      E+P  W+  +  G ++ V    N Y K +  G
Sbjct: 772  ELEQVSKNDIMSSIQNTRHPTSYDQYNRELPRHWYEGRVNGLALCVAVSFNNY-KDQNNG 830

Query: 899  YAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQ 958
              + C F    ++       +    Q++  +G G   I   D+  +  SDH+++ Y    
Sbjct: 831  LQVKCTFEFTDHA-------NVSLSQISFFVG-GWTKIP-EDELSKIDSDHVFIGY---N 878

Query: 959  TCYDIRLPLESNLEPFESNHVNVSFEPWLG----QGLEVKMCGLHPVYMDEVEE---LDQ 1011
              + I+   + +       +V++ FE   G    +  +V  CG   +Y  E  E    D 
Sbjct: 879  NWFYIKCEEDRHKNGCVPTNVSLRFEVTDGASKVKECKVMKCGFSLIYESEGSEKVSRDA 938

Query: 1012 TTNQPSRF--------TVYNLNEFDQHFVG 1033
            T +  S+           Y   E+D  F G
Sbjct: 939  TFDANSKIEESKLSETKSYKTAEYDADFYG 968


>gi|5302806|emb|CAB46047.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268445|emb|CAB80965.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 1103

 Score =  305 bits (782), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 256/802 (31%), Positives = 400/802 (49%), Gaps = 99/802 (12%)

Query: 7   KLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS--KGG 64
           KL+  ++S  + + M+GI G  G+GK+TI R ++  +S +F    F+       S   G 
Sbjct: 191 KLKLCLESKEARI-MVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGSDVSGM 249

Query: 65  LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNRE 124
            +S +++LLS++L   D  I    +   ++  RL+ KKVL+++DDV +++ L++L G  E
Sbjct: 250 KLSWEKELLSEILGQKDIKI----EHFGVVEQRLKHKKVLILLDDVDNLEFLRTLVGKAE 305

Query: 125 WFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSA 184
           WFGSGSRII+ ++D  LLK H +D +Y+    +   AL++    AF  Y P  +  +L+ 
Sbjct: 306 WFGSGSRIIVITQDRQLLKAHEIDLIYEVKLPSQGLALKMICQYAFGKYSPPDDFKELAF 365

Query: 185 RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKK 244
            + + AG LPL L VLGS L  RS +EW   L  L+     +I+  L++S+  L   ++ 
Sbjct: 366 EVAKLAGNLPLGLSVLGSSLKRRSKEEWMEMLAELQNGLNRDIMKTLRVSYVRLDPKDQD 425

Query: 245 IFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQ 303
           IF  IA  F G     + +FL G G +  I ++ L +K LI +  N+T+ MH+LLQ+L  
Sbjct: 426 IFHYIAWLFNGWKVKSIKDFL-GDGVNVNIRLKTLDDKSLIRLTPNDTIEMHNLLQKLAT 484

Query: 304 QIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHE--NEVYLCASAKA 361
           +I + +S    GKR  L   EE+  V T++TGTE + GI          ++ ++     +
Sbjct: 485 EIDREESNGNPGKRRFLENAEEILDVFTDNTGTEKLLGIDFSTSSDSQIDKPFISIDENS 544

Query: 362 FSKMTNLRLLKI----------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           F  M NL+ L I            L+LPNGL YL  +L+ L W   PLK LPSN + +  
Sbjct: 545 FQGMLNLQFLNIHDHYWWQPRETRLRLPNGLVYLPRKLKWLRWENCPLKRLPSNFKAEYL 604

Query: 412 IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
           +E+ M  S + +LW G + L  LK M L +S NL  +PD + A NLE+L L  C  L E 
Sbjct: 605 VELRMENSALEKLWNGTQPLGSLKKMNLRNSNNLKEIPDLSLATNLEELDLCNCEVL-ES 663

Query: 472 HPSLLLHNKLIILNMKDCTSLITLPGKILMKSL-----------EKLNLKSLPTTISGLK 520
            PS L    L  LN+  C  L   P +I+M+S            + L  K+LP  +  L 
Sbjct: 664 FPSPLNSESLKFLNLLLCPRLRNFP-EIIMQSFIFTDEIEIEVADCLWNKNLP-GLDYLD 721

Query: 521 C-------------LSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-------------- 553
           C             L  L V G+    +  E V+ +  L  + L                
Sbjct: 722 CLRRCNPSKFRPEHLKNLTVRGNNMLEKLWEGVQSLGKLKRVDLSECENMIEIPDLSKAT 781

Query: 554 ----------TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
                      ++  LP +I  L  L  LN++ C  L++LP+ + NL  L ++ L GCS 
Sbjct: 782 NLEILDLSNCKSLVMLPSTIGNLQKLYTLNMEECTGLKVLPMDI-NLSSLHTVHLKGCSS 840

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
           L+  P+I +S+  L+   LD T+I+EVP   E  ++L  L++  CK+L R P       S
Sbjct: 841 LRFIPQISKSIAVLN---LDDTAIEEVP-CFENFSRLMELSMRGCKSLRRFPQ---ISTS 893

Query: 664 LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPS 723
           ++ LNL+    +E VP  + +   L+ L++SG                 M K+++   P+
Sbjct: 894 IQELNLADT-AIEQVPCFIEKFSRLKVLNMSGCK---------------MLKNIS---PN 934

Query: 724 LSGLCSLRKLNLTDCNLMEGAL 745
           +  L  L K++ TDC  +  AL
Sbjct: 935 IFRLTRLMKVDFTDCGGVITAL 956



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 124/289 (42%), Gaps = 54/289 (18%)

Query: 544 EHLSELHLEGTAIRGL-----PL------------------SIELLSGLVLLNLKNCRSL 580
           E+L EL +E +A+  L     PL                   + L + L  L+L NC  L
Sbjct: 602 EYLVELRMENSALEKLWNGTQPLGSLKKMNLRNSNNLKEIPDLSLATNLEELDLCNCEVL 661

Query: 581 EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
           E  P  + N + L+ L L  C +L+ FPEI+      S +F D   I EV   +     L
Sbjct: 662 ESFPSPL-NSESLKFLNLLLCPRLRNFPEIIMQ----SFIFTDEIEI-EVADCL-WNKNL 714

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
             L+  DC  L R   S    + LK L + G   LE + E +  +  L+ +D+S      
Sbjct: 715 PGLDYLDC--LRRCNPSKFRPEHLKNLTVRGNNMLEKLWEGVQSLGKLKRVDLSEC---- 768

Query: 701 STSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
                             +++P LS   +L  L+L++C  +   LPS IGNL  L  L +
Sbjct: 769 ---------------ENMIEIPDLSKATNLEILDLSNCKSLV-MLPSTIGNLQKLYTLNM 812

Query: 761 SK-NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCA 808
            +      LP  I +LS L  + L+ C  L+ +PQ+  +I  + ++  A
Sbjct: 813 EECTGLKVLPMDI-NLSSLHTVHLKGCSSLRFIPQISKSIAVLNLDDTA 860


>gi|297848176|ref|XP_002891969.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337811|gb|EFH68228.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  305 bits (782), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 224/696 (32%), Positives = 362/696 (52%), Gaps = 69/696 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +++   ++  L++     V+++G+ G  G+GK+TIAR +   +S+ F+ + F+DN+ E +
Sbjct: 187 LETHLREMESLLNFDYVGVKIVGLAGPAGIGKSTIARALCSGLSNRFQRTCFMDNLME-N 245

Query: 61  SKGGL------VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
            K GL      + LQ QLLS++L L    I +    + ++  RL  K++L+++DDV ++ 
Sbjct: 246 CKIGLGEYSLKLHLQEQLLSKVLNLNGIRISH----LRVIQERLHDKRILIILDDVENLV 301

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL++LA N  WFG GSR+I+T+ ++ +L+ HG++++Y+    +  EAL +F + AF+   
Sbjct: 302 QLEALA-NISWFGPGSRVIVTTENKEILQQHGINDIYQVGFPSESEALTIFCLSAFRQTS 360

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           P    ++L+  +++  G LPL L VLGS L G+S  +W   L RL+I     I  +L++ 
Sbjct: 361 PPDGFMKLTCEVVKICGNLPLGLHVLGSSLRGKSQADWIDELPRLKICLDGRIESVLKVG 420

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
           ++ L E ++ IFL IA F      D+VT+ L        +G++ L +K LI   ++ + M
Sbjct: 421 YESLHEKDQVIFLLIAIFLNYAHVDHVTSVLAKTNLDVSLGLKNLAKKYLIQRESSIVVM 480

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           H LLQ +  Q++ +Q   E  KR  L    E+C VL  + G   + G+  D     NE+ 
Sbjct: 481 HHLLQVMATQVISKQ---ERSKRQILVDANEICFVLEMAEGNGSIIGVSFD-VAEINELR 536

Query: 355 LCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNL 406
           +  SA AF+KM NL  LK+ N        L +PN +E+   RL+LL W  YP K LP   
Sbjct: 537 I--SATAFAKMCNLAFLKVYNGKHTEKTQLHIPNEMEF-PRRLKLLHWEAYPKKSLPIGF 593

Query: 407 QMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
            ++  ++  M +S++ +LW+G + L  LK M L+ S +L  +PD + A NLE L L GCT
Sbjct: 594 CLENLVKFNMAFSKLEKLWEGTQPLANLKEMNLAVSTHLKELPDLSKATNLESLNLNGCT 653

Query: 467 RLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEK------LNLKSLPTTISGLK 520
            L EI  S++  +KL  L M  C SL  +P  I + SLE+      L LK  P + + +K
Sbjct: 654 ALVEIPSSIVNLHKLSELGMSTCESLEVIPTLINLASLERIWMFQSLQLKRFPDSPTNVK 713

Query: 521 CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGL-PLSIELLSGLVLLNLKNCRS 579
            +   D        E P  + H   L+ L +   + R     S  L + +  ++L N   
Sbjct: 714 EIEIYDTG----VEELPASLRHCTRLTTLDI--CSNRNFKTFSTHLPTCISWISLSNS-G 766

Query: 580 LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTK 639
           +E +   +  L  L+ L L+GC KLK  PE+                    P S      
Sbjct: 767 IERITACIKGLHNLQFLILTGCKKLKSLPEL--------------------PDS------ 800

Query: 640 LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
           LELL   DC++L R+   +    +  TL  + C KL
Sbjct: 801 LELLRAEDCESLERVSGPLKTPTA--TLRFTNCIKL 834



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 139/313 (44%), Gaps = 39/313 (12%)

Query: 602 SKLKKFPEIVRSMKDLSELFLD-GTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           SKL+K  E  + + +L E+ L   T +KE+P  +   T LE LNL+ C  LV +PSSI+ 
Sbjct: 606 SKLEKLWEGTQPLANLKEMNLAVSTHLKELPD-LSKATNLESLNLNGCTALVEIPSSIVN 664

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEEL----DISGTAVPHSTSWYSYIPI-NLMRK 715
           L  L  L +S C  LE +P TL  + SLE +     +     P S +    I I +   +
Sbjct: 665 LHKLSELGMSTCESLEVIP-TLINLASLERIWMFQSLQLKRFPDSPTNVKEIEIYDTGVE 723

Query: 716 SVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHL 775
            +   L   + L +L   +  +       LP+ I        + LS +    +   I  L
Sbjct: 724 ELPASLRHCTRLTTLDICSNRNFKTFSTHLPTCIS------WISLSNSGIERITACIKGL 777

Query: 776 SKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKL 835
             L  + L  CK+L+SLP+LP ++  +R   C SL  +   LK   +      C   +KL
Sbjct: 778 HNLQFLILTGCKKLKSLPELPDSLELLRAEDCESLERVSGPLKTPTATLRFTNC---IKL 834

Query: 836 LGNKSLAF---SMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYN 892
            G    A    S +R +             ++PG EIP  F ++  G+S+T+  P +  N
Sbjct: 835 GGQARRAIIKGSFVRGW------------ALLPGGEIPAKFDHRVRGNSLTI--PHSTSN 880

Query: 893 KKKLVGYAICCVF 905
           +     + +C V 
Sbjct: 881 R-----FKVCVVI 888


>gi|227438237|gb|ACP30608.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1373

 Score =  305 bits (781), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 229/705 (32%), Positives = 334/705 (47%), Gaps = 105/705 (14%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++SR  ++  L+      +R IGI GM G+GKTT+A+ V+D IS  +EAS F+ +  E  
Sbjct: 212 INSRLVEIEQLLCKQPWGIRRIGIWGMPGIGKTTLAKAVFDDISGGYEASCFIKHFDEAF 271

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           S+ GL  L  +   ++LK     + +      + G  L++K+ L+V+DDV +    +S  
Sbjct: 272 SEKGLHRLLEEHFGKILKELPR-VCSSITRPSLQGEILRKKRTLVVLDDVKNPLAAESFL 330

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G   WFG GS IIITSRD+ + +   ++ VY+   L+ DEALQL +   F      Q+ +
Sbjct: 331 GGFHWFGPGSLIIITSRDKQVYRHRQINHVYEVRSLSEDEALQLLSQCVFGNDIRDQKRM 390

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS  +I YA G P AL   G  L G+   E  +T  +L++  P +I D+   S+  L +
Sbjct: 391 ELSMEVIDYARGNPFALSFYGRELKGKKPSEMEATFLKLKLRTPYKIHDLFSSSYKTLDD 450

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            EK IFLDIACFF G D DYV   L+GCGF P +GI VL+EKCL                
Sbjct: 451 NEKNIFLDIACFFVGEDVDYVMQLLDGCGFFPHVGIDVLVEKCL---------------- 494

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
                                             GTE +EGI LD     + +       
Sbjct: 495 ----------------------------------GTEXIEGIFLDT----SSLLFDVKPT 516

Query: 361 AFSKMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
            F  M NL  L I          L LP GLE L   LRLL W  YP + LP        +
Sbjct: 517 XFDNMLNLXFLXIYXXXHENXXGLGLPRGLESLPYELRLLHWENYPSESLPQEFDPCHLV 576

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
           E+ M YS + +LW+G K+LD LK   L +S+ L  + D + A N+E + L GCT+L    
Sbjct: 577 ELNMSYSHLQKLWEGTKNLDMLKTCKLCYSQQLTEVDDLSKAQNIELIDLHGCTKLQRF- 635

Query: 473 PSLLLHNKLIILNMKDCTSLITLP---GKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG 529
           P+      L ++N+  CT + ++P     I+   L+    + LP ++  L     L++  
Sbjct: 636 PATGQLRHLRVVNLSGCTEIRSVPEVSPNIVELHLQGTGTRELPISLVALSQEDDLNLE- 694

Query: 530 DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSN 589
             K     ++V   +HL +                    LVLLN+K+C  L+ LP  + +
Sbjct: 695 --KLTTLAQVVSSNQHLQK--------------------LVLLNMKDCVHLQSLP-HMFH 731

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK 649
           L+ L  L LSGCS+LK      R++K   EL+L G ++ ++P    L   +E+LN   C 
Sbjct: 732 LETLEVLDLSGCSELKSIQGFPRNLK---ELYLVGAAVTKLPP---LPRSIEVLNAHGCM 785

Query: 650 NLVRLPSSIIALKSLKTLNLSGCFKL------ENVPETLGQIESL 688
           +LV +P     L    T   S CF L      E V   L  IE +
Sbjct: 786 SLVSIPFGFERLPRYYT--FSNCFALYAQEVREFVANGLANIERI 828



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 14/172 (8%)

Query: 571 LLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEV 630
           L++L  C  L+  P T   L+ LR + LSGC++++  PE+     ++ EL L GT  +E+
Sbjct: 623 LIDLHGCTKLQRFPAT-GQLRHLRVVNLSGCTEIRSVPEV---SPNIVELHLQGTGTREL 678

Query: 631 PSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEE 690
           P S+  L++ + LNL     L ++ SS   L+ L  LN+  C  L+++P     +E+LE 
Sbjct: 679 PISLVALSQEDDLNLEKLTTLAQVVSSNQHLQKLVLLNMKDCVHLQSLPHMF-HLETLEV 737

Query: 691 LDISGTAVPHSTSWYSYIPINL----MRKSVALKLPSLSGLCSLRKLNLTDC 738
           LD+SG +   S   +   P NL    +  +   KLP L    S+  LN   C
Sbjct: 738 LDLSGCSELKSIQGF---PRNLKELYLVGAAVTKLPPLPR--SIEVLNAHGC 784



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 28/171 (16%)

Query: 640 LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP 699
           +EL++L  C  L R P++   L+ L+ +NLSGC ++ +VPE    I    EL + GT   
Sbjct: 621 IELIDLHGCTKLQRFPATG-QLRHLRVVNLSGCTEIRSVPEVSPNIV---ELHLQGTGTR 676

Query: 700 HSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPS--DIGNLCSLKE 757
                   +PI+L+  S    L +L  L +L ++  ++ +L +  L +  D  +L SL  
Sbjct: 677 E-------LPISLVALSQEDDL-NLEKLTTLAQVVSSNQHLQKLVLLNMKDCVHLQSLPH 728

Query: 758 LYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCA 808
           ++              HL  L  ++L  C  L+S+   P N++++ + G A
Sbjct: 729 MF--------------HLETLEVLDLSGCSELKSIQGFPRNLKELYLVGAA 765


>gi|240255955|ref|NP_193427.4| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658425|gb|AEE83825.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1147

 Score =  305 bits (781), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 260/816 (31%), Positives = 404/816 (49%), Gaps = 113/816 (13%)

Query: 7   KLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS--KGG 64
           KL+  ++S  + + M+GI G  G+GK+TI R ++  +S +F    F+       S   G 
Sbjct: 154 KLKLCLESKEARI-MVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGSDVSGM 212

Query: 65  LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNRE 124
            +S +++LLS++L   D  I    +   ++  RL+ KKVL+++DDV +++ L++L G  E
Sbjct: 213 KLSWEKELLSEILGQKDIKI----EHFGVVEQRLKHKKVLILLDDVDNLEFLRTLVGKAE 268

Query: 125 WFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSA 184
           WFGSGSRII+ ++D  LLK H +D +Y+    +   AL++    AF  Y P  +  +L+ 
Sbjct: 269 WFGSGSRIIVITQDRQLLKAHEIDLIYEVKLPSQGLALKMICQYAFGKYSPPDDFKELAF 328

Query: 185 RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKK 244
            + + AG LPL L VLGS L  RS +EW   L  L+     +I+  L++S+  L   ++ 
Sbjct: 329 EVAKLAGNLPLGLSVLGSSLKRRSKEEWMEMLAELQNGLNRDIMKTLRVSYVRLDPKDQD 388

Query: 245 IFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQ 303
           IF  IA  F G     + +FL G G +  I ++ L +K LI +  N+T+ MH+LLQ+L  
Sbjct: 389 IFHYIAWLFNGWKVKSIKDFL-GDGVNVNIRLKTLDDKSLIRLTPNDTIEMHNLLQKLAT 447

Query: 304 QIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHE--NEVYLCASAKA 361
           +I + +S    GKR  L   EE+  V T++TGTE + GI          ++ ++     +
Sbjct: 448 EIDREESNGNPGKRRFLENAEEILDVFTDNTGTEKLLGIDFSTSSDSQIDKPFISIDENS 507

Query: 362 FSKMTNLRLLKI----------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
           F  M NL+ L I            L+LPNGL YL  +L+ L W   PLK LPSN + +  
Sbjct: 508 FQGMLNLQFLNIHDHYWWQPRETRLRLPNGLVYLPRKLKWLRWENCPLKRLPSNFKAEYL 567

Query: 412 IEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
           +E+ M  S + +LW G + L  LK M L +S NL  +PD + A NLE+L L  C  L E 
Sbjct: 568 VELRMENSALEKLWNGTQPLGSLKKMNLRNSNNLKEIPDLSLATNLEELDLCNCEVL-ES 626

Query: 472 HPSLLLHNKLIILNMKDCTSLITLPGKILMKSL-----------EKLNLKSLPTTISGLK 520
            PS L    L  LN+  C  L   P +I+M+S            + L  K+LP    GL 
Sbjct: 627 FPSPLNSESLKFLNLLLCPRLRNFP-EIIMQSFIFTDEIEIEVADCLWNKNLP----GLD 681

Query: 521 CLSTLDVSGDLKFREFPEIVEHMEHLS-------ELHLEGTAIRGLPLSIEL-------- 565
            L  L      KFR      EH+++L+       E   EG    G    ++L        
Sbjct: 682 YLDCLRRCNPSKFRP-----EHLKNLTVRGNNMLEKLWEGVQSLGKLKRVDLSECENMIE 736

Query: 566 ------LSGLVLLNLKNCRSLEILPVTVSNLK-----------------------CLRSL 596
                  + L +L+L NC+SL +LP T+ NL+                        L ++
Sbjct: 737 IPDLSKATNLEILDLSNCKSLVMLPSTIGNLQKLYTLNMEECTGLKVLPMDINLSSLHTV 796

Query: 597 KLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPS 656
            L GCS L+  P+I +S+  L+   LD T+I+EVP   E  ++L  L++  CK+L R P 
Sbjct: 797 HLKGCSSLRFIPQISKSIAVLN---LDDTAIEEVP-CFENFSRLMELSMRGCKSLRRFPQ 852

Query: 657 SIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKS 716
                 S++ LNL+    +E VP  + +   L+ L++SG                 M K+
Sbjct: 853 ---ISTSIQELNLADT-AIEQVPCFIEKFSRLKVLNMSGCK---------------MLKN 893

Query: 717 VALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNL 752
           ++   P++  L  L K++ TDC  +  AL   +  +
Sbjct: 894 IS---PNIFRLTRLMKVDFTDCGGVITALSDPVTTM 926



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 124/289 (42%), Gaps = 54/289 (18%)

Query: 544 EHLSELHLEGTAIRGL-----PL------------------SIELLSGLVLLNLKNCRSL 580
           E+L EL +E +A+  L     PL                   + L + L  L+L NC  L
Sbjct: 565 EYLVELRMENSALEKLWNGTQPLGSLKKMNLRNSNNLKEIPDLSLATNLEELDLCNCEVL 624

Query: 581 EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
           E  P  + N + L+ L L  C +L+ FPEI+      S +F D   I EV   +     L
Sbjct: 625 ESFPSPL-NSESLKFLNLLLCPRLRNFPEIIMQ----SFIFTDEIEI-EVADCL-WNKNL 677

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
             L+  DC  L R   S    + LK L + G   LE + E +  +  L+ +D+S      
Sbjct: 678 PGLDYLDC--LRRCNPSKFRPEHLKNLTVRGNNMLEKLWEGVQSLGKLKRVDLSEC---- 731

Query: 701 STSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
                             +++P LS   +L  L+L++C  +   LPS IGNL  L  L +
Sbjct: 732 ---------------ENMIEIPDLSKATNLEILDLSNCKSL-VMLPSTIGNLQKLYTLNM 775

Query: 761 SK-NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCA 808
            +      LP  I +LS L  + L+ C  L+ +PQ+  +I  + ++  A
Sbjct: 776 EECTGLKVLPMDI-NLSSLHTVHLKGCSSLRFIPQISKSIAVLNLDDTA 823


>gi|297848110|ref|XP_002891936.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337778|gb|EFH68195.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1064

 Score =  305 bits (781), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 230/698 (32%), Positives = 365/698 (52%), Gaps = 70/698 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMI-GICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE- 58
           ++   +K+ FL+     D  MI GICG  G+GKTTIAR ++ L+S  F+ S F++N+R  
Sbjct: 190 LEEHLKKIEFLLHLNHDDGAMIVGICGPAGIGKTTIARALHSLLSSSFQLSCFMENLRGS 249

Query: 59  ----ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
               +   G  + LQ+QLLS++L      +++    +  +  RL  +KVL+++DDV D+K
Sbjct: 250 YNSGLDEYGLKLCLQQQLLSKILNQNGMRVYH----LGAIHERLCDRKVLIILDDVNDLK 305

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL++LA    WFG GSRII+T+ D+ LL+ HG++  Y+    + + +L++    AF+   
Sbjct: 306 QLEALADETRWFGPGSRIIVTTEDQELLQQHGINNTYQVGFPSKEISLKILCRYAFRQSF 365

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLE-IEPPSEILDILQI 233
           P     +L+ R+ +  G LPL L V+GS L G+  +EW   + RLE I    +I ++L++
Sbjct: 366 PHHGFKELALRLTKLCGNLPLGLRVVGSSLRGKKEEEWEEVMCRLETILDHRDIEEVLRV 425

Query: 234 SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TL 292
            ++ L E EK +FL IA FF   D D V   L         G+R+L+ K LI +     +
Sbjct: 426 GYESLHENEKSLFLHIAVFFNHKDGDIVNAMLAETNLDIKHGLRILVNKSLIYISTKREI 485

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            MH LLQ++G+Q++ RQ P    KR  L    E+C VL   TG   V GI  D       
Sbjct: 486 VMHKLLQQVGRQVIHRQEP---WKRQILIDAHEICDVLENDTGNRAVSGISFDT---SGI 539

Query: 353 VYLCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
             +  S +A  +M+NLR L +          + +P  +E+   RLRLL W  YP K LP 
Sbjct: 540 AEVIISDRALRRMSNLRFLSVYKTRYNGNDRVHIPEEIEF-PPRLRLLHWEAYPKKSLPL 598

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
              ++  +E+YM  S++ +LW+G + L  LK M  S S  L  +PD + A NL++L L G
Sbjct: 599 RFCLENLVELYMRDSQLEKLWEGAQPLTNLKKMDFSSSRKLKELPDLSNATNLKRLQLNG 658

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLST 524
           CT L EI  ++   +KL  L M  C +L  +P  I + SLE++ +               
Sbjct: 659 CTSLVEIPSTIANLHKLEDLVMNSCVNLEVVPTHINLASLERIYM--------------- 703

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLK---NCRSLE 581
               G  + R FP++     ++S+L +  TA+  +P SI L S L  ++++   N ++L 
Sbjct: 704 ---IGCSRLRTFPDM---STNISQLLMSETAVEKVPASIRLWSRLSYVDIRGSGNLKTLT 757

Query: 582 ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG----TSIKEVPSSIELL 637
             P      + L SL LS  + ++K P  ++ +  L  L + G     S+ E+PSS+ LL
Sbjct: 758 HFP------ESLWSLDLS-YTDIEKIPYCIKRIHHLQSLEVTGCRKLASLPELPSSLRLL 810

Query: 638 TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
              +  +L +  + +R P++         LN + CFKL
Sbjct: 811 MAEDCKSLENVTSPLRTPNA--------KLNFTNCFKL 840



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 154/349 (44%), Gaps = 43/349 (12%)

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
           PE +E    L  LH E    + LPL    L  LV L +++ + LE L      L  L+ +
Sbjct: 574 PEEIEFPPRLRLLHWEAYPKKSLPLRF-CLENLVELYMRDSQ-LEKLWEGAQPLTNLKKM 631

Query: 597 KLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
             S   KLK+ P++  +  +L  L L+G TS+ E+PS+I  L KLE L ++ C NL  +P
Sbjct: 632 DFSSSRKLKELPDLSNAT-NLKRLQLNGCTSLVEIPSTIANLHKLEDLVMNSCVNLEVVP 690

Query: 656 SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRK 715
           + I  L SL+ + + GC +L   P+    I  L   + +   VP S   +S +    +R 
Sbjct: 691 THI-NLASLERIYMIGCSRLRTFPDMSTNISQLLMSETAVEKVPASIRLWSRLSYVDIRG 749

Query: 716 SVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHL 775
           S  LK              LT         P       SL  L LS      +P  I  +
Sbjct: 750 SGNLK-------------TLTH-------FPE------SLWSLDLSYTDIEKIPYCIKRI 783

Query: 776 SKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKL 835
             L ++E+  C++L SLP+LP ++R +    C SL  +   L+   +      C      
Sbjct: 784 HHLQSLEVTGCRKLASLPELPSSLRLLMAEDCKSLENVTSPLRTPNAKLNFTNCFK---- 839

Query: 836 LGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
           LG +S    +   +L           V +PG E+P  F +Q  G+S+T+
Sbjct: 840 LGGESRRVIIQSLFLYEF--------VCLPGREMPPEFNHQARGNSLTI 880


>gi|15227315|ref|NP_179279.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|3757516|gb|AAC64218.1| disease resistance protein (TIR-NBS-LRR class), putative
           [Arabidopsis thaliana]
 gi|330251451|gb|AEC06545.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1109

 Score =  305 bits (781), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 225/697 (32%), Positives = 357/697 (51%), Gaps = 69/697 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLI-SHEFEASGFLDNVRE- 58
           +++  +++  L+D     V+++GI G  G+GKTTIAR ++ L+   +F+ + F+DN+R  
Sbjct: 188 IEAHLKEMEVLLDFDYDGVKIVGIFGPAGIGKTTIARALHSLLLFKKFQLTCFVDNLRGS 247

Query: 59  ----ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
               I   G  + LQ  LLS++L      I      +  +  RL   KVL+++DDV DVK
Sbjct: 248 YPIGIDEYGLKLRLQEHLLSKILNQDGMRI----SHLGAVKERLCDMKVLIILDDVNDVK 303

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL++LA +  WFG GSR+I+T+ ++ +L+ HG+D +Y     + ++A+++    AFK   
Sbjct: 304 QLEALANDTTWFGPGSRVIVTTENKEILQRHGIDNMYHVGFPSDEKAMEILCGYAFKQSS 363

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           P      L+ ++    G LPL L V+GS L G+  DEW+S + RL+     +I D+L++ 
Sbjct: 364 PRPGFNYLAQKVTWLCGNLPLGLRVVGSSLRGKKEDEWKSVIRRLDTIIDRDIEDVLRVG 423

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLW 293
           ++ L E E+ +FL IA FF   D D V   L         G+++L+ K LI +     + 
Sbjct: 424 YESLHENEQSLFLHIAVFFNCKDVDLVKAMLADDNLDIAHGLKILVNKSLIYISTTGEIR 483

Query: 294 MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
           MH LLQ++G+Q + RQ P    KR  L   +E+C+VL    GT +V GI  D     +EV
Sbjct: 484 MHKLLQQVGRQAINRQEP---WKRLILTNAQEICYVLENDKGTGVVSGISFDT-SGISEV 539

Query: 354 YLCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSN 405
            L  S +A  +M+NLR L +          + +P  +++   RLRLL W  YP K LP  
Sbjct: 540 IL--SNRALRRMSNLRFLSVYKTRHDGNNIMHIPEDMKF-PPRLRLLHWEAYPSKSLPLG 596

Query: 406 LQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
             ++  +E+ M  S++ +LW+G + L  LK M LS S +L  +PD + A NLE+L L  C
Sbjct: 597 FCLENLVELNMKDSQLEKLWEGTQLLTNLKKMDLSRSVHLKELPDLSNATNLERLELCDC 656

Query: 466 TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTL 525
             L E+  S+   +KL  L M +C SL  +P  I + SLE + +                
Sbjct: 657 RALVELPKSIGNLHKLENLVMANCISLEVIPTHINLASLEHITM---------------- 700

Query: 526 DVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN---CRSLEI 582
             +G  + + FP+   ++E L    L GT++  +P SI   S L    +KN    +SL  
Sbjct: 701 --TGCSRLKTFPDFSTNIERLL---LIGTSVEEVPASIRHWSSLSDFCIKNNEDLKSLTY 755

Query: 583 LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG----TSIKEVPSSIELLT 638
            P  V  L           + ++K P+ ++    L  L + G    TS+ E+P S+ LL 
Sbjct: 756 FPEKVELLDL-------SYTDIEKIPDCIKGFHGLKSLDVAGCRKLTSLPELPMSLGLLV 808

Query: 639 KLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
            L+  +L      +  PS+         LN + CFKL
Sbjct: 809 ALDCESLEIITYPLNTPSA--------RLNFTNCFKL 837



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 92/375 (24%), Positives = 148/375 (39%), Gaps = 55/375 (14%)

Query: 516 ISGLKCLSTLDVSGD-LKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL 574
           +S L+ LS      D       PE ++    L  LH E    + LPL    L  LV LN+
Sbjct: 549 MSNLRFLSVYKTRHDGNNIMHIPEDMKFPPRLRLLHWEAYPSKSLPLGF-CLENLVELNM 607

Query: 575 KNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSI 634
           K+ + LE L      L  L+ + LS    LK+ P++  +                     
Sbjct: 608 KDSQ-LEKLWEGTQLLTNLKKMDLSRSVHLKELPDLSNA--------------------- 645

Query: 635 ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
              T LE L L DC+ LV LP SI  L  L+ L ++ C  LE +P  +  + SLE + ++
Sbjct: 646 ---TNLERLELCDCRALVELPKSIGNLHKLENLVMANCISLEVIPTHI-NLASLEHITMT 701

Query: 695 G-----TAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDI 749
           G     T    ST+    + I    + V   +   S L      N  D   +    P  +
Sbjct: 702 GCSRLKTFPDFSTNIERLLLIGTSVEEVPASIRHWSSLSDFCIKNNEDLKSLT-YFPEKV 760

Query: 750 GNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCAS 809
                 + L LS      +P  I     L ++++  C++L SLP+LP ++  +    C S
Sbjct: 761 ------ELLDLSYTDIEKIPDCIKGFHGLKSLDVAGCRKLTSLPELPMSLGLLVALDCES 814

Query: 810 LVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLR---EYLEAVSNTRQHLSVVVPG 866
           L  +   L    +      C      LG +S    + R   ++L+  +         +PG
Sbjct: 815 LEIITYPLNTPSARLNFTNCFK----LGEESRRLIIQRCATQFLDGYA--------CLPG 862

Query: 867 SEIPEWFMYQNEGSS 881
             +P+ F  +  G++
Sbjct: 863 RVMPDEFNQRTSGNN 877


>gi|40846341|gb|AAR92462.1| SNC1-like protein [Arabidopsis thaliana]
          Length = 1052

 Score =  305 bits (780), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 236/749 (31%), Positives = 364/749 (48%), Gaps = 84/749 (11%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS--KGGLVSLQRQLL 73
           S + RM+GI G  G+GK+TI R +Y  +S +F    F+       S   G  +S +++LL
Sbjct: 201 SKEARMVGIWGQSGIGKSTIGRALYSQLSIQFHHRAFVTYKSTSGSDVSGMKLSWEKELL 260

Query: 74  SQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRII 133
           S++L   D  I    D   ++  RL+ KKVL+++DDV +++ L++L G  EWFGSGSRII
Sbjct: 261 SEILSQKDIKI----DHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGSRII 316

Query: 134 ITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGL 193
           + ++D   LK H +D VY+    +   AL +    AF    P  +   L+A++ + AG L
Sbjct: 317 VITQDRQFLKAHDIDLVYEVKLPSQGLALTMLCRSAFGKDSPPDDFRDLAAKVAKLAGNL 376

Query: 194 PLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFF 253
           PL L VLGS L  RS +EW   L  L+     +I+  L++S+  L   ++ +F  IAC F
Sbjct: 377 PLGLSVLGSSLKRRSKEEWMEMLAELQNGLNRDIMKTLRVSYVRLDPKDQDMFHYIACLF 436

Query: 254 KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPE 312
            G +   + +FL G   +  I ++ L +K LI +  +  + MH L+++L  +I + +S  
Sbjct: 437 NGFEVKSIKDFL-GDAVNVNIRLKTLHDKSLIRITPDEIVEMHTLVEKLATEIDREESKG 495

Query: 313 ELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHH--ENEVYLCASAKAFSKMTNLRL 370
             G R  L   EE+  V ++ TGTE + GI          ++ +      +F  M NL+ 
Sbjct: 496 NPGNRRFLKNAEEILDVFSDKTGTEKLLGIYFSASTDPWNDKPFFSIDENSFQGMLNLQY 555

Query: 371 LKI----------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
           L I            L+LPNGL YL  +L+ L W   PLK LPSN + +  +E+ M  S 
Sbjct: 556 LGIHDHSMWYPRETRLRLPNGLVYLPRKLKWLWWNDCPLKRLPSNFKAEYLVELIMVNSD 615

Query: 421 IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
           + +LW G + L  LK M L +S NL  +PD + A NLE+L +  C  L E  P+ L    
Sbjct: 616 LEKLWDGTQSLGSLKEMNLRYSTNLKEIPDLSLAINLERLDISDCEVL-ESFPTPLNSES 674

Query: 481 LIILNMKDCTSLITLPG--------------KILMKS---------------LEKLN--- 508
           L  LN+  C +L   P               KI++K                L + N   
Sbjct: 675 LAYLNLTGCPNLRNFPAIKMGCSNVDFLQERKIVVKDCFWNKNLLGLDYLDCLRRCNPRK 734

Query: 509 ----------------LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLE 552
                           L+ L   +  L+ L T+D+S      E P++ +   +L  L L 
Sbjct: 735 FRPEHLKDLTLRGNNKLEKLWEGVQSLESLVTMDLSECENLTEIPDLSKAT-NLENLKLN 793

Query: 553 G-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIV 611
              ++  LP +I  L  LV   +K C  LE+LP  V NL  L+ L L GCS L+ FP I 
Sbjct: 794 NCKSLVTLPTTIGNLQKLVRFEMKECTGLEVLPTAV-NLSSLKILDLGGCSSLRTFPLI- 851

Query: 612 RSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSG 671
               ++  L+L+ T+I+EVP  IE  + L +L +  C+ L  +  +I  L+SL   + + 
Sbjct: 852 --STNIVWLYLENTAIEEVPCCIENFSGLNVLLMYCCQRLKNISPNIFRLRSLFFADFTN 909

Query: 672 CFKLENVPETLGQIESLEELDISGTAVPH 700
           C          G I++L +  +  T   H
Sbjct: 910 C---------RGVIKALSDATVVATMEDH 929



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 147/350 (42%), Gaps = 42/350 (12%)

Query: 451 FTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK 510
           F G  NL+ L +   +  Y     L L N            L+ LP K+         LK
Sbjct: 547 FQGMLNLQYLGIHDHSMWYPRETRLRLPN-----------GLVYLPRKLKWLWWNDCPLK 595

Query: 511 SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLE-GTAIRGLPLSIELLSGL 569
            LP+       +  + V+ DL+  +  +  + +  L E++L   T ++ +P  + L   L
Sbjct: 596 RLPSNFKAEYLVELIMVNSDLE--KLWDGTQSLGSLKEMNLRYSTNLKEIP-DLSLAINL 652

Query: 570 VLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKE 629
             L++ +C  LE  P  + N + L  L L+GC  L+ FP I     ++  L      +K+
Sbjct: 653 ERLDISDCEVLESFPTPL-NSESLAYLNLTGCPNLRNFPAIKMGCSNVDFLQERKIVVKD 711

Query: 630 VPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLE 689
              +  LL     L+  DC  L R        + LK L L G  KLE + E +  +ESL 
Sbjct: 712 CFWNKNLLG----LDYLDC--LRRCNPRKFRPEHLKDLTLRGNNKLEKLWEGVQSLESLV 765

Query: 690 ELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDI 749
            +D+S                NL       ++P LS   +L  L L +C  +   LP+ I
Sbjct: 766 TMDLSECE-------------NLT------EIPDLSKATNLENLKLNNCKSL-VTLPTTI 805

Query: 750 GNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
           GNL  L    + + + + +  +  +LS L  ++L  C  L++ P +  NI
Sbjct: 806 GNLQKLVRFEMKECTGLEVLPTAVNLSSLKILDLGGCSSLRTFPLISTNI 855



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 117/240 (48%), Gaps = 33/240 (13%)

Query: 602 SKLKKFPEIVRSMKDLSELFLD-GTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           S L+K  +  +S+  L E+ L   T++KE+P  + L   LE L++SDC+ L   P+ + +
Sbjct: 614 SDLEKLWDGTQSLGSLKEMNLRYSTNLKEIPD-LSLAINLERLDISDCEVLESFPTPLNS 672

Query: 661 LKSLKTLNLSGCFKLENVPET---LGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSV 717
            +SL  LNL+GC  L N P        ++ L+E  I       + +      ++ +R+  
Sbjct: 673 -ESLAYLNLTGCPNLRNFPAIKMGCSNVDFLQERKIVVKDCFWNKNLLGLDYLDCLRRCN 731

Query: 718 ALKL--------------------PSLSGLCSLRKLNLTDC-NLMEGALPSDIGNLCSLK 756
             K                       +  L SL  ++L++C NL E  +P D+    +L+
Sbjct: 732 PRKFRPEHLKDLTLRGNNKLEKLWEGVQSLESLVTMDLSECENLTE--IP-DLSKATNLE 788

Query: 757 ELYLSK-NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP--PNIRQVRVNGCASLVTL 813
            L L+   S V+LPT+I +L KL+  E+++C  L+ LP      +++ + + GC+SL T 
Sbjct: 789 NLKLNNCKSLVTLPTTIGNLQKLVRFEMKECTGLEVLPTAVNLSSLKILDLGGCSSLRTF 848


>gi|147792427|emb|CAN68030.1| hypothetical protein VITISV_003124 [Vitis vinifera]
          Length = 1039

 Score =  305 bits (780), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 245/704 (34%), Positives = 380/704 (53%), Gaps = 64/704 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M    EKL+ LM    ++V ++GICG+GG+GKTT+A  +Y+ +S++++ S FL  V+E S
Sbjct: 198 MSFHLEKLKSLMKKKFNEVCVVGICGIGGIGKTTVAMAIYNELSNQYDGSSFLRKVKERS 257

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            +  L  LQ +LL  +L+     + N+ +G+ M+   L  K+VL+V DDV ++KQL+ LA
Sbjct: 258 ERDTL-QLQHELLQDILRGKSLKLSNIDEGVKMIKRSLSSKRVLVVFDDVDNLKQLEYLA 316

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
             + WFG+ S IIIT+RD++LL  +GV+  Y+   LN +EA +LF++ AF+   P +   
Sbjct: 317 EEQGWFGAKSTIIITTRDKNLLAQYGVNIEYEVTTLNEEEAXELFSLWAFRQNLPNKVDQ 376

Query: 181 QLSARIIRYAGGLPLALEVLGS-FLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
            L   ++RYA GLPLAL+VLGS F   ++ +EW+S LE+L+      I  +L+ S+DGL 
Sbjct: 377 DLFYEVVRYAKGLPLALKVLGSNFFDKKTKEEWKSALEKLKKSSDERIYSVLRTSYDGLD 436

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
            ++K IFLDIACFFKG D+D+V+  L   G     GIR L +KCLIT+  N L MHD++Q
Sbjct: 437 SVDKDIFLDIACFFKGKDKDFVSRIL---GPXAKNGIRTLEDKCLITISXNMLDMHDMVQ 493

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           ++G  IV ++ P++ G RSRLW  +    VLT++     ++ I L   +  N + +    
Sbjct: 494 QMGWNIVHQECPKDPGGRSRLWGSDAE-FVLTKNXLLXKLKVINLS--YSVNLIKI---- 546

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLL-----GWRGYPLKFLPSNLQMDKTIEI 414
             FS + NL +L +   +    L    ++ + L     G       F   N  M K  E 
Sbjct: 547 PDFSSVPNLEILTLEGCRRLKSLPSSFDKFKCLQSLSCGGCSKLTSFPEINGNMGKLREF 606

Query: 415 YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTG-APNLEKLILEGCTRLYEIHP 473
               + I E+   IKHL+ L+ ++L   + L+   +  G   +L+ L L+GC++L  +  
Sbjct: 607 NFSGTSINEVPLSIKHLNGLEELLLEDCKKLVAFSENIGSLSSLKSLKLKGCSKLKGLPS 666

Query: 474 SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKF 533
           S+     L  L++  C +L+                  LP +I  L  L TL ++G LKF
Sbjct: 667 SIXHLKALKNLDLSXCENLVR-----------------LPESICSLXSLETLFLNGCLKF 709

Query: 534 REFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCL 593
           + FP +  HM +L  L L+ TAI+ +P SI  L  L  LNL    S++ + + + +L  L
Sbjct: 710 KGFPGVKGHMNNLRVLRLDSTAIKEIPSSITHLKALEYLNLSRS-SIDGVVLDICHLLSL 768

Query: 594 RSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVR 653
           + L LS C                        +I+ +P+ I  L+ LE+LNL D  +   
Sbjct: 769 KELHLSSC------------------------NIRGIPNDIFCLSSLEILNL-DGNHFSS 803

Query: 654 LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA 697
           +P+ I  L  L +LNL  C KL+ VPE      SL  LD+ G +
Sbjct: 804 IPAGISRLSHLTSLNLRHCNKLQQVPEL---PSSLRLLDVHGPS 844



 Score =  166 bits (420), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 137/445 (30%), Positives = 206/445 (46%), Gaps = 82/445 (18%)

Query: 569 LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIK 628
           L +L L+ CR L+ LP +    KCL+SL   GCSKL  FPEI  +M  L E    GTSI 
Sbjct: 555 LEILTLEGCRRLKSLPSSFDKFKCLQSLSCGGCSKLTSFPEINGNMGKLREFNFSGTSIN 614

Query: 629 EVP------------------------------------------------SSIELLTKL 640
           EVP                                                SSI  L  L
Sbjct: 615 EVPLSIKHLNGLEELLLEDCKKLVAFSENIGSLSSLKSLKLKGCSKLKGLPSSIXHLKAL 674

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
           + L+LS C+NLVRLP SI +L SL+TL L+GC K +  P   G + +L  L +  TA+  
Sbjct: 675 KNLDLSXCENLVRLPESICSLXSLETLFLNGCLKFKGFPGVKGHMNNLRVLRLDSTAIKE 734

Query: 701 STSWYSYIP----INLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLK 756
             S  +++     +NL R S+   +  +  L SL++L+L+ CN+    +P+DI  L SL+
Sbjct: 735 IPSSITHLKALEYLNLSRSSIDGVVLDICHLLSLKELHLSSCNIR--GIPNDIFCLSSLE 792

Query: 757 ELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDA 816
            L L  N F S+P  I+ LS L ++ L  C +LQ +P+LP ++R + V+G +   +   +
Sbjct: 793 ILNLDGNHFSSIPAGISRLSHLTSLNLRHCNKLQQVPELPSSLRLLDVHGPSDGTSSSPS 852

Query: 817 LKLCKSDSTMIACLDS-LKLLGNKSLAFSMLREYLEAVSNTRQHLS-----VVVPGSE-I 869
           L       +++ CL+S ++   N+S      R      S +    S     +V+PGS  I
Sbjct: 853 LL--PPLHSLVNCLNSAIQDSENRS------RRNWNGASFSDSWYSGNGICIVIPGSSGI 904

Query: 870 PEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFH-------------VLKNSRGNNC 916
           P+W   + +GS I +  P N +     +G+A+ CV+               L  S   + 
Sbjct: 905 PKWIKNKRKGSEIEIGLPQNWHLNNDFLGFALYCVYAPXPSNLEAMIRTGFLNISEKRSI 964

Query: 917 FGSYPTHQLNCHIGHGIYGIGFRDK 941
           FGS     L  + G   +G  F+ K
Sbjct: 965 FGSLFGFYLEVNCGMASHGDEFQSK 989


>gi|357513935|ref|XP_003627256.1| Resistance protein PRG [Medicago truncatula]
 gi|355521278|gb|AET01732.1| Resistance protein PRG [Medicago truncatula]
          Length = 809

 Score =  305 bits (780), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 211/606 (34%), Positives = 330/606 (54%), Gaps = 56/606 (9%)

Query: 27  MGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQ--RQLLSQLLKLADNSI 84
           M G+GKTTIA  V+  +  ++E+  F+ NVRE S + G  SL+  + +LS LLK  +N  
Sbjct: 1   MPGIGKTTIAEEVFRRLRSKYESCYFMANVREESERCGTNSLRLRKIILSTLLK-EENLK 59

Query: 85  WNVFDGID-MLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLK 143
             + +G+  ++  RL R KVL+V+DD+ D +QL+ L G  +W G  SRIIIT+RD+ +L 
Sbjct: 60  DELINGLPPLVKKRLHRMKVLIVLDDIKDAEQLEVLIGTVDWLGPRSRIIITTRDKQVL- 118

Query: 144 THGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ-ECVQLSARIIRYAGGLPLALEVLGS 202
              VD++Y+   L+  E+ QLFN+ AF  ++ L+ E  +LS +++ Y  G+PL L+ L +
Sbjct: 119 AGKVDDIYEVEPLDSAESFQLFNLHAFTKHEHLEMEYYELSKKMVDYTAGVPLVLKALAN 178

Query: 203 FLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVT 262
            L G+  D W S  + L+IE    +  + ++ +  L   EK I LDIACFF G       
Sbjct: 179 LLCGKDKDIWESQAKILKIEQIENVHVVFRLIYTNLDSHEKNILLDIACFFDGLKLKLDL 238

Query: 263 NFLEGCGFHPVIGIRV--LIEKCLITVHNNTLW-MHDLLQELGQQIVQRQSPEELGKRSR 319
             L     H  +  ++  L +K L+T+   ++  MHD++QE   +IV+++S EE G RSR
Sbjct: 239 IKLLLKDRHYSVSTKLDRLKDKALVTISQQSIVSMHDIIQETAWEIVRQESVEEPGSRSR 298

Query: 320 LWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICN---- 375
           L   +++ HVL +  G E +  + +       E++L  S + F+KM+ L+ L I      
Sbjct: 299 LLNPDDIYHVLKDDKGGEAIRSMAI-RLSEIKELHL--SPRVFAKMSKLKFLDIYTNGSQ 355

Query: 376 ----LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHL 431
               L LP GLE+L N LR L W  YPL+ LPS    +  + + + YSR+ +LW G+K +
Sbjct: 356 NEGRLSLPRGLEFLPNELRYLRWEYYPLESLPSKFSAENLVRLSLPYSRLKKLWNGVKDI 415

Query: 432 DKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTS 491
             L V+ILS S  L  +PDF+ A +LE                        ++N++ C  
Sbjct: 416 VNLNVLILSSSTFLTELPDFSKAASLE------------------------VINLRLCLK 451

Query: 492 LITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHL 551
            + L G I + SL+     S  T +S L+ LS  + +     +EF    +HM   + L L
Sbjct: 452 ELDLSGCISLTSLQ-----SNDTHLSSLRYLSLYNCTS---VKEFSVTSKHM---NILDL 500

Query: 552 EGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIV 611
           EGT+I+ LP SI L + L  L L +   ++ LP ++ NL  LR L L  CS+L+  PE+ 
Sbjct: 501 EGTSIKNLPSSIGLQTKLEKLYLAHTH-IQSLPKSIRNLTRLRHLDLHLCSELQTLPELA 559

Query: 612 RSMKDL 617
           +S++ L
Sbjct: 560 QSLEIL 565



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 176/419 (42%), Gaps = 83/419 (19%)

Query: 578 RSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELL 637
           R LE LP   + L+ LR       S   KF     S ++L  L L  + +K++ + ++ +
Sbjct: 364 RGLEFLP---NELRYLRWEYYPLESLPSKF-----SAENLVRLSLPYSRLKKLWNGVKDI 415

Query: 638 TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG-- 695
             L +L LS    L  LP    A  SL+ +NL  C K               ELD+SG  
Sbjct: 416 VNLNVLILSSSTFLTELPDFSKA-ASLEVINLRLCLK---------------ELDLSGCI 459

Query: 696 --TAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNL----MEGA----L 745
             T++  + +  S           +L+  SL    S+++ ++T  ++    +EG     L
Sbjct: 460 SLTSLQSNDTHLS-----------SLRYLSLYNCTSVKEFSVTSKHMNILDLEGTSIKNL 508

Query: 746 PSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVN 805
           PS IG    L++LYL+     SLP SI +L++L +++L  C  LQ+LP+L  ++  +   
Sbjct: 509 PSSIGLQTKLEKLYLAHTHIQSLPKSIRNLTRLRHLDLHLCSELQTLPELAQSLEILDAC 568

Query: 806 GCASL------VTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQH 859
           GC SL       T  + LK  +       CL     L   SL    L   +  +S + QH
Sbjct: 569 GCLSLENVAFRSTASEQLKEKRKRVIFWNCLK----LNEPSLKAIELNAQINMMSFSYQH 624

Query: 860 LSV----------------VVPGSEIPEWFMYQNEGSS-ITVTRPSNLYNKKKLVGYAIC 902
           +S                 V PGSEIPEW  Y       IT+   S  Y  K  +G+   
Sbjct: 625 ISTWDRDHDHNHNHNHSIYVYPGSEIPEWLEYSTTTHDYITIDLSSAPYFSK--LGFIFG 682

Query: 903 CVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCY 961
            +         N+  G     +++     GI     R + G   SDH++L+Y  R + Y
Sbjct: 683 FIIPT------NSSEGQIVKLKISDGQDKGIKMYLSRPRRG-IESDHVYLMYDRRCSHY 734


>gi|356506553|ref|XP_003522044.1| PREDICTED: probable WRKY transcription factor 19-like [Glycine max]
          Length = 1026

 Score =  305 bits (780), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 221/630 (35%), Positives = 330/630 (52%), Gaps = 38/630 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D +   L  L+   S DV +IGI G+GG GKTTIA+ V+  +  E+E+  FL NV+E  
Sbjct: 114 IDKQVAHLESLLKQESKDVCVIGIWGVGGNGKTTIAQEVFSKLYLEYESCCFLANVKEEI 173

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            + G++SL+ +L + +L+   N I         +   + +KKVL+V+DDV D +QL+ L 
Sbjct: 174 RRLGVISLKEKLFASILQKYVN-IKTQKGLSSSIKKMMGQKKVLIVLDDVNDSEQLEELF 232

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G  +W+GSGSRIIIT+RD  +L  + V E+Y   GL+  EA QLF + AF       E  
Sbjct: 233 GTPDWYGSGSRIIITTRDIKVLIANKVPEIYHVGGLSSCEAFQLFKLNAFNQGDLEMEFY 292

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS R++ YA G+PL L++L   L G+  + W+S LE+L+    + + D +++SFD L  
Sbjct: 293 ELSKRVVDYAKGIPLVLKILAHLLCGKDKEVWKSQLEKLKGIKSNNVHDFVKLSFDDLHH 352

Query: 241 LEKKIFLDIACFFKGNDR--------DYVTNFLEGCGFHP--VIGIRVLIEKCLITV-HN 289
            E++I LD+ACF +  +         D +   L  CG H   V+G+  L EK LIT+  +
Sbjct: 353 EEQEILLDLACFCRRANMIENFNMKVDSINILLGDCGSHNAVVVGLERLKEKSLITISED 412

Query: 290 NTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHH 349
           N + M D +QE+  +IV ++S  +LG RSRLW   E+  VL    GT+ +  I       
Sbjct: 413 NVVSMLDTIQEMAWEIVCQES-NDLGNRSRLWDPIEIYDVLKNDKGTKAIRSITTPLSTL 471

Query: 350 ENEVYLCASAKAFSKMTNLRLLKICN--LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
           +N   L     AF +M+NL+ L   N    LP GL+ L N LR L W  YPL  LP    
Sbjct: 472 KN---LKLRPDAFVRMSNLQFLDFGNNSPSLPQGLQSLPNELRYLHWIHYPLTCLPEQFS 528

Query: 408 MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
            +K + + +  SR+ +LW  +K+L  LK + L     L  +PDF+ + NL+ L +   + 
Sbjct: 529 AEKLVILDLSCSRVEKLWHEVKNLVNLKNVKLRWCVLLNELPDFSKSTNLKVLDVSCSSG 588

Query: 468 LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDV 527
           L  +HPS+   +KL  L++  C+SLI                    +   G         
Sbjct: 589 LTSVHPSIFSLHKLEKLDLSGCSSLI-----------------KFSSDDDGHLSSLLYLN 631

Query: 528 SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
             D +  E  E     E++ EL L G  I  LPLS   L  L +L+L     +E LP  +
Sbjct: 632 LSDCE--ELREFSVTAENVVELDLTGILISSLPLSFGSLRKLEMLHLIR-SDIESLPTCI 688

Query: 588 SNLKCLRSLKLSGCSKLKKFPEIVRSMKDL 617
           +NL  LR L LS CS L   P++  S++ L
Sbjct: 689 NNLTRLRYLDLSCCSNLCILPKLPPSLETL 718



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 130/543 (23%), Positives = 210/543 (38%), Gaps = 137/543 (25%)

Query: 569  LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIK 628
            LV+L+L +C  +E L   V NL  L+++KL  C  L + P+  +S               
Sbjct: 532  LVILDL-SCSRVEKLWHEVKNLVNLKNVKLRWCVLLNELPDFSKS--------------- 575

Query: 629  EVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
                     T L++L++S    L  +  SI +L  L+ L+LSGC  L             
Sbjct: 576  ---------TNLKVLDVSCSSGLTSVHPSIFSLHKLEKLDLSGCSSL------------- 613

Query: 689  EELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLME------ 742
              +  S     H +S       +                  LR+ ++T  N++E      
Sbjct: 614  --IKFSSDDDGHLSSLLYLNLSDCEE---------------LREFSVTAENVVELDLTGI 656

Query: 743  --GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIR 800
               +LP   G+L  L+ L+L ++   SLPT I +L++L  ++L  C  L  LP+LPP++ 
Sbjct: 657  LISSLPLSFGSLRKLEMLHLIRSDIESLPTCINNLTRLRYLDLSCCSNLCILPKLPPSLE 716

Query: 801  QVRVNGCASLVTLL---DALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTR 857
             +  + C SL T+L    A++  + +   +   + LK L   SL    L   +  +    
Sbjct: 717  TLHADECESLETVLFPSTAVEQFEENRKRVEFWNCLK-LDEFSLMAIELNAQINVMKFAY 775

Query: 858  QHLSVVV--------------PGSEIPEWFMYQNEGSSITV----TRPSNLYNKKKLVGY 899
            QHLS  +              PGS +PEW  Y+     + +    T P++L       G+
Sbjct: 776  QHLSAPILDHVHDSYQAVYMYPGSSVPEWLAYKTRKDYVIIDLSSTPPAHL-------GF 828

Query: 900  AICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHG-------IYGIGFRDKFGQAGSDHLWL 952
              C +     +       G  P  Q +  I +G          I     +     DH+ +
Sbjct: 829  IFCFIL----DKDTEEFLG--PALQFSISISNGENECKRDSVEIQTSGPYSMIYLDHVCV 882

Query: 953  LYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLE---VKMCGLHP----VYMDE 1005
            LY  R +CY     L + L+      + VS   WL  G     +K  G+ P    VY + 
Sbjct: 883  LYDKRCSCY-----LNNRLKSLAKFKIKVS---WLTDGERWEALKGFGVSPINTSVYHNF 934

Query: 1006 VEELDQTTNQPSRFTVYNLNEFDQHFVGSKMIVATTSKRSLTEYF--GAEASGSGCCDDE 1063
            V++++                 DQ F           KR+L   F  G EA G    ++E
Sbjct: 935  VQQMELC---------------DQGFRPVLKRTPKKRKRNLVYVFVTGIEAEGDYAHEEE 979

Query: 1064 EPQ 1066
            E Q
Sbjct: 980  ETQ 982


>gi|297794833|ref|XP_002865301.1| hypothetical protein ARALYDRAFT_917053 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297311136|gb|EFH41560.1| hypothetical protein ARALYDRAFT_917053 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1164

 Score =  304 bits (779), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 238/698 (34%), Positives = 349/698 (50%), Gaps = 85/698 (12%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
            R+IG+ GM G+GKTT+ + +Y     +F     +D +R  S+   L  L   LL +LL 
Sbjct: 240 TRVIGVVGMPGIGKTTLLKELYKTWKGKFSRYALIDQIRGKSNNFRLECLPTLLLEKLLP 299

Query: 79  LADN-SIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGN------REWFGSGSR 131
             +N  I +V +        L+ +KVL+V+DDV + +Q+ +L G        EW   GSR
Sbjct: 300 ELNNPQIDSVEEPYKTHKGLLRERKVLVVLDDVSEREQIYALLGKYDLQNKHEWIKDGSR 359

Query: 132 IIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ---PLQECVQLSARIIR 188
           I+I + D+ LLK   V + Y    LN+ + LQLF   AF   Q   P  + ++LS   + 
Sbjct: 360 IVIATNDKSLLKGL-VHDTYVVRQLNHRDGLQLFRYHAFHDDQAITPKVDFMKLSDEFVH 418

Query: 189 YAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLD 248
           YA G PLAL++LG  L  +++  W + L+ L   P + I +++Q+SFD L   +K  FLD
Sbjct: 419 YARGHPLALKILGRELYEKNMKHWETKLKILAQSPTTYIGEVVQVSFDELSMAQKDAFLD 478

Query: 249 IACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQR 308
           IACF +  D DYV + L          I+ L  K LI   +  + MHDLL    +++  R
Sbjct: 479 IACF-RSQDVDYVESLLVSSDPGSAEAIKALKNKFLIDTCDGRVEMHDLLYTFSRELDLR 537

Query: 309 QSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNL 368
            S +   K+ RLW ++++ +V  ++ G   V GI LD    + E  L    + F  + NL
Sbjct: 538 ASTQGGSKQRRLWLQQDIINVQQKTMGAADVRGIFLDLSEVKGETSL--DREHFKNICNL 595

Query: 369 RLLKICN------------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
           R LK  N            + +P+GLE     +R L W  +PL+ LP++      +++ +
Sbjct: 596 RYLKFYNSHCPQECKTNNKINMPDGLELPLKEVRCLHWLKFPLEELPNDFDPINLVDLKL 655

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
            YS I  LW+G+K    LK + L+HS  L  +   + A NL++L LEGCT L        
Sbjct: 656 PYSEIERLWEGVKDTPVLKWVDLNHSSKLCSLSGLSKAQNLQRLNLEGCTSL-------- 707

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
                                    +SL  +NL S          L TL +S    F+EF
Sbjct: 708 -------------------------ESLRDVNLMS----------LKTLTLSNCSNFKEF 732

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
           P I E++E L   +L+GT I  LP ++  L  LVLLN+K+C+ LE +P  V  LK L+ L
Sbjct: 733 PLIPENLEAL---YLDGTVISQLPDNVVNLKRLVLLNMKDCKMLENIPTCVGELKALQKL 789

Query: 597 KLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPS 656
            LSGC KLK+FPEI +S   L  L LDGTSIK +P     L  ++ L LS    +  LP 
Sbjct: 790 ILSGCLKLKEFPEINKS--SLKILLLDGTSIKTMPQ----LPSVQYLCLSRNDQISYLPV 843

Query: 657 SIIALK-------SLKTLNLSGCFKLENVPETLGQIES 687
            I  L        +L+ L+  GC  L+NV   L +I S
Sbjct: 844 GINQLTYVPELPPTLQYLDAHGCSSLKNVATPLARIVS 881



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 197/461 (42%), Gaps = 100/461 (21%)

Query: 572  LNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP 631
            LNL+ C SLE L     NL  L++L LS CS  K+FP I    ++L  L+LDGT I ++P
Sbjct: 699  LNLEGCTSLESLRDV--NLMSLKTLTLSNCSNFKEFPLIP---ENLEALYLDGTVISQLP 753

Query: 632  SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
             ++  L +L LLN+ DCK L  +P+ +  LK+L+ L LSGC KL+  PE      SL+ L
Sbjct: 754  DNVVNLKRLVLLNMKDCKMLENIPTCVGELKALQKLILSGCLKLKEFPEI--NKSSLKIL 811

Query: 692  DISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGN 751
             + GT++         +P          +LPS+  LC                       
Sbjct: 812  LLDGTSI-------KTMP----------QLPSVQYLC----------------------- 831

Query: 752  LCSLKELYLSKNSFVS-LPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
                    LS+N  +S LP  I  L+               +P+LPP ++ +  +GC+SL
Sbjct: 832  --------LSRNDQISYLPVGINQLT--------------YVPELPPTLQYLDAHGCSSL 869

Query: 811  VTLLDALKLCKSDSTMIACLDSLKLLGN-----KSLAFSMLREYLEAVSNTRQH------ 859
              +   L    S +    C  +    GN     K    S  +   + + + R+H      
Sbjct: 870  KNVATPLARIVS-TVQNHCTFNFTNCGNLEQAAKEEITSYAQRKCQLLPDARKHYNEGLN 928

Query: 860  ----LSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNN 915
                 S   PG E+P WF ++  GS +      + ++ K+L G A+C V   L N    +
Sbjct: 929  SEALFSTCFPGCEVPSWFGHEVVGSLLQRKLLPH-WHDKRLSGIALCAVVSFLDNQDQIS 987

Query: 916  CFGSYPTHQLNCHIGHGI-----YGIGFR--DKFGQAGSDHLWLLYLSRQTCYDIRLPLE 968
            CF    T ++       +      GI  R  D+  +  SDH+++ Y+S    + IR   +
Sbjct: 988  CFSVTCTFKIKAEDKSWVPFTCPVGIWTREGDQKDKIESDHVFIAYIS--CPHSIRCLED 1045

Query: 969  SNLEPFESNHVNVSFEPWLGQG----LEVKMCGLHPVYMDE 1005
             N +       ++ F    G       +V  CGL  VY ++
Sbjct: 1046 ENSDKCNFTEASLEFTVTSGTSGVGVFKVLKCGLSLVYEND 1086


>gi|297791241|ref|XP_002863505.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309340|gb|EFH39764.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1137

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 239/708 (33%), Positives = 363/708 (51%), Gaps = 73/708 (10%)

Query: 7   KLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLV 66
           KL F  DS +   R+IG+ GM G+GKTT+ + ++     +F     +D +R   S+   V
Sbjct: 190 KLDFEDDSRT---RIIGVFGMPGIGKTTLLKELFKKWKPKFIRHSLVDQIRR-KSEDSSV 245

Query: 67  SLQRQLLSQLL-KLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
            L   LL +LL  LAD  I N  D  +M    L ++KVL+++DDV   KQ+ +L G  +W
Sbjct: 246 CLPTTLLGELLTSLADPRIDNDEDPYNMYKDELLKRKVLVILDDVSTRKQIDALLGRLDW 305

Query: 126 FGSGSRIIITSRDEHLLKTHG-VDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSA 184
              GS+I+I + D  L  T+G VD+ Y    LN+ ++LQ+F+  A    +   + ++LS 
Sbjct: 306 IKKGSKIVIATSDMSL--TNGLVDDTYMVQKLNHRDSLQVFHYHA-SVDKSKDDFMKLSE 362

Query: 185 RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEP-PSEILDILQISFDGLQELEK 243
             + Y+ G  LAL+VLG  L  +++D W   L+ L   P P     + ++S+D L   +K
Sbjct: 363 EFVHYSRGHSLALKVLGGDLKKQNIDYWNDKLKTLTQSPIPRR---VFKVSYDELSSEQK 419

Query: 244 KIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQ 303
             FLDIAC F+ +D +Y+ + L          +  L + CLI   +  + MHDLL  L +
Sbjct: 420 DAFLDIAC-FRSHDVEYIESLLAS----STGAVEALSDMCLINTCDGRVEMHDLLYTLSR 474

Query: 304 QIVQRQSPEELG-KRSRLWKEEEVCHVLTESTGTEL---------VEGIVLDNYHHENEV 353
           ++  + S +  G K+ RLW  ++   ++ E T   L         V GI LD    E E+
Sbjct: 475 ELDPKASTQIGGSKQRRLWLHQD---IIKEGTINVLKNKLVRPKDVRGIFLDLSEVEGEI 531

Query: 354 YLCASAKAFSKMTNLRLLKICN------------LQLPNGLEYLSNRLRLLGWRGYPLKF 401
             C     F  M NLR LK  N            +  P G++    ++R L W  +PL+ 
Sbjct: 532 --CLDCDHFEDMCNLRYLKFYNSHCPQECKTTNKINTPEGVKLPLKKVRCLHWLEFPLEE 589

Query: 402 LPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLI 461
            P++      +++ +  S+I +LW+G K    LK + L HS  L  +     A  L++L 
Sbjct: 590 FPNDFDPINLVDLKLPRSKIKQLWEGDKDTPFLKWVDLQHSSKLCSLSGLLKAEKLQRLN 649

Query: 462 LEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKC 521
           LEGCT L  +   +     L  LN+K CTSL  LP         ++NL S          
Sbjct: 650 LEGCTTLKTLPHDMHKMKVLSFLNLKGCTSLEFLP---------EMNLVS---------- 690

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
           L TL +SG   F++FP I +++E    L+L+GT I  LP ++E L  LV+LN+K+C+ LE
Sbjct: 691 LKTLTLSGCSSFKDFPLISDNIE---TLYLDGTEISQLPTNMEKLQSLVVLNMKDCKMLE 747

Query: 582 ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLE 641
            +P  V+ LK L+ L LS C  LK FPEI  +M  L+ L LDGT+++ +P     L  ++
Sbjct: 748 EIPGRVNELKALQELILSDCFNLKNFPEI--NMSSLNILLLDGTAVEVMPQ----LPSVQ 801

Query: 642 LLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLE 689
            L+LS    +  LP  I  L  LK LNL  C KL +VPE    ++ L+
Sbjct: 802 YLSLSRNTKISCLPIGISHLSQLKWLNLKYCTKLTSVPEFPPNLQCLD 849



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 226/496 (45%), Gaps = 102/496 (20%)

Query: 544  EHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
            E L  L+LEG T ++ LP  +  +  L  LNLK C SLE LP    NL  L++L LSGCS
Sbjct: 643  EKLQRLNLEGCTTLKTLPHDMHKMKVLSFLNLKGCTSLEFLPEM--NLVSLKTLTLSGCS 700

Query: 603  KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
              K FP I     ++  L+LDGT I ++P+++E L  L +LN+ DCK L  +P  +  LK
Sbjct: 701  SFKDFPLI---SDNIETLYLDGTEISQLPTNMEKLQSLVVLNMKDCKMLEEIPGRVNELK 757

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
            +L+ L LS CF L+N P          E+++S               +N++         
Sbjct: 758  ALQELILSDCFNLKNFP----------EINMSS--------------LNIL--------- 784

Query: 723  SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS-LPTSITHLSKLLNI 781
                             L++G     +  L S++ L LS+N+ +S LP  I+HLS+L  +
Sbjct: 785  -----------------LLDGTAVEVMPQLPSVQYLSLSRNTKISCLPIGISHLSQLKWL 827

Query: 782  ELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLC----KSDSTMI--ACLDSLKL 835
             L+ C +L S+P+ PPN++ +  +GC+ L T+   L       ++ ST I   C +  + 
Sbjct: 828  NLKYCTKLTSVPEFPPNLQCLDAHGCSLLKTVSKPLARIMPTEQNHSTFIFTNCQNLEQA 887

Query: 836  LGNKSLAFSMLREYLEAVSNTRQH--------LSVVVPGSEIPEWFMYQNEGSSITVTRP 887
               +  +++  +  L + +  R +         S   PG E+P WF ++  GS + V   
Sbjct: 888  AKEEITSYAQRKCQLLSYARKRYNGGLVSESLFSTCFPGCEVPSWFCHETVGSELKVKLL 947

Query: 888  SNLYNKKKLVGYAIC------------------CVFHVLKNSRGNNCF--GSYPTHQLNC 927
             + ++ KKL G A+C                  C F V   S     F  GS+  H+   
Sbjct: 948  PH-WHDKKLAGIALCAVVSCFEHQDQISRFSVTCTFKVEDKSWIPFTFPVGSWTRHEDGK 1006

Query: 928  HIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFE-PW 986
               H        D+  +  SDH+++ Y S    + I+ P + N +   S   +++F    
Sbjct: 1007 VTRH-------EDEKDKIESDHVFIGYTSYP--HTIKCPEDGNSDKCNSTQASLNFTITG 1057

Query: 987  LGQGLEVKMCGLHPVY 1002
              + L+V  CG   VY
Sbjct: 1058 ANEKLKVLQCGFSLVY 1073


>gi|357513695|ref|XP_003627136.1| Disease resistance protein [Medicago truncatula]
 gi|355521158|gb|AET01612.1| Disease resistance protein [Medicago truncatula]
          Length = 991

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 232/696 (33%), Positives = 355/696 (51%), Gaps = 80/696 (11%)

Query: 2   DSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS 61
           +  CE +  L+ S    V+++GI GMGG+GKTTIA+V++     +++   F  N +E S 
Sbjct: 49  EKNCECVESLLKS----VQILGIWGMGGMGKTTIAKVLFAKHFAQYDQVCFA-NAKEYSV 103

Query: 62  KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAG 121
                    +L S+LLK   +    V     M   RL+  KVL+V+D+V  + Q + L  
Sbjct: 104 S--------KLFSELLKEEFSPSDVVISTFHM--RRLRSTKVLIVLDNVDSLDQFEYLCR 153

Query: 122 NREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQ 181
           +       SR+IIT+RD  LL+   V  +Y+       ++L+LF ++AF    P ++   
Sbjct: 154 DYGKLHKDSRLIITTRDRQLLRKR-VHRIYEVKQWEDPKSLELFCLEAFVPSHPREKYEH 212

Query: 182 LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQEL 241
           L  R + YAGG+PLAL+V    L  R ++ W S  ++L     + + ++L++S+D L  L
Sbjct: 213 LLQRAVTYAGGVPLALKVFALLLRSREIEFWESAFKKLGKHSNATVHEVLKLSYDDLDAL 272

Query: 242 EKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWMHDLLQE 300
           +KKIFLDIA FF G  +D V   L+ C F     I VL +  LIT+ N+ T+ MHDLLQ+
Sbjct: 273 QKKIFLDIAFFFIGEKKDCVARILDACDFEASSEIVVLKDMALITISNDHTIQMHDLLQK 332

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G  I   +  +     +RL   E +  V+ E+ G+  +EGI+LD   + +   L  SA 
Sbjct: 333 MGSDICNDRGTDP-ATHTRLSGREAL-DVIEENKGSSFIEGIMLDLSQNND---LSLSAD 387

Query: 361 AFSKMTNLRLLKI-------CN---LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK 410
            FSKM  LR+LK        C    L LP  LE  SN+LR   W GYP + LP   +   
Sbjct: 388 TFSKMKGLRILKFYAPSNQSCTTTYLDLPEFLEPFSNKLRYFEWNGYPFESLPKPFKAKF 447

Query: 411 TIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYE 470
            +EI M YS + ELW+GI+  DKL+ + +S  ++ +++PD + A  L+ + L GC  L +
Sbjct: 448 LVEIRMRYSIVKELWQGIQEFDKLEGIDMSECKHFVQLPDLSKASRLKWINLSGCESLVD 507

Query: 471 IHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGD 530
           +HPS+L  N L+ L +  CT + ++ G+  +  LE++       ++ G   L    VS D
Sbjct: 508 LHPSVLCANTLVTLILDRCTKVRSVRGEKHLSFLEEI-------SVDGCTSLEEFAVSSD 560

Query: 531 LKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
           L              +  L L  T I+ L LSI  L  +  LNL++ R L  LP  + ++
Sbjct: 561 L--------------IENLDLSSTGIQTLDLSIGCLPKIKRLNLESLR-LSHLPKELPSV 605

Query: 591 KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD--C 648
             LR LK+SG         ++   + L ELF DG            L  L +L++ D   
Sbjct: 606 ISLRELKISG-------SRLIVEKQQLHELF-DG------------LRSLRILHMKDFVF 645

Query: 649 KNLVRLPSSIIALKSLKTLNLSGC----FKLENVPE 680
            N   LP++I  +  L  LNL G      +LE +PE
Sbjct: 646 VNQFDLPNNIDVVSKLMELNLDGSNMKRLELECIPE 681



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 177/417 (42%), Gaps = 81/417 (19%)

Query: 567 SGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLS---ELFLD 623
           S L  +NL  C SL  L  +V     L +L L  C+K++     VR  K LS   E+ +D
Sbjct: 492 SRLKWINLSGCESLVDLHPSVLCANTLVTLILDRCTKVRS----VRGEKHLSFLEEISVD 547

Query: 624 G-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
           G TS++E   S +L+  L+L        +  L  SI  L  +K LNL    +L ++P+ L
Sbjct: 548 GCTSLEEFAVSSDLIENLDL----SSTGIQTLDLSIGCLPKIKRLNLES-LRLSHLPKEL 602

Query: 683 GQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLME 742
             + SL EL ISG+ +             ++ K    +L    GL SLR L++ D     
Sbjct: 603 PSVISLRELKISGSRL-------------IVEKQQLHEL--FDGLRSLRILHMKD----- 642

Query: 743 GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL--LNIELEDCKRLQ--SLPQLPPN 798
                           ++  N F  LP +I  +SKL  LN++  + KRL+   +P+LPP 
Sbjct: 643 ----------------FVFVNQF-DLPNNIDVVSKLMELNLDGSNMKRLELECIPELPPL 685

Query: 799 IRQVRVNGCASLVTLLDALKLCKS---DSTMIACLDSLKLLGN------KSLAFSMLREY 849
           I  +    C SL+++     L       +  I+  +SL L G+      KSL  +M+   
Sbjct: 686 ITVLNAVNCTSLISVSSLKNLATKMMGKTKHISFSNSLNLDGHSLTLIMKSLNLTMMSAV 745

Query: 850 LEAVSNTRQHLSV----------VVPGSEIPEWFMYQ-NEGSSITVTRPSNLYNKKKLVG 898
            + VS  R  ++V            PG+ IP     Q    SSIT      L +   L+G
Sbjct: 746 FQNVSVRRLRVAVHSYNYTSVDTCEPGTCIPSLLQCQIATDSSITFNL---LPDHSNLLG 802

Query: 899 YAICCVFHVLKNSRGNNCFGSYPTHQLNCHIG-HGIYGIGFRDKFGQAGSDHLWLLY 954
           +       VL  + G+         +  C++G  GI          +  SDH+++ Y
Sbjct: 803 FIYSV---VLSPAGGDGTKKGEARIKCQCNLGEQGIKVSLLNTDCTELNSDHVYVWY 856


>gi|357468483|ref|XP_003604526.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355505581|gb|AES86723.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 983

 Score =  303 bits (777), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 227/625 (36%), Positives = 342/625 (54%), Gaps = 46/625 (7%)

Query: 8   LRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-ISSKGGLV 66
           L  L+   S  VR+IGI GMGG+GKTTIA  ++     +++   FL+ V E + + GG+ 
Sbjct: 19  LNSLLKKESEQVRVIGIWGMGGIGKTTIAEEIFSQNRSDYDGCCFLEKVSERLKAHGGVG 78

Query: 67  SLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWF 126
            L+  LLS+LLK +      V +    +  R+ R KVL+V+DDV +  QL+ L G  +WF
Sbjct: 79  CLKESLLSELLKES------VKELSGDIKRRISRMKVLIVLDDVKETDQLEMLFGTLDWF 132

Query: 127 GSGSRIIITSRDEHLLKTHGVDE--VYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSA 184
            S SRII+TSRD+ +L+T+ VD   +Y+   L+  EAL+LFN+ AFK   P  E  +LS 
Sbjct: 133 QSDSRIILTSRDKQVLRTNEVDHDGLYEVRVLDSSEALELFNLNAFKQSHPEMEYYELSK 192

Query: 185 RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKK 244
           R+I YA G+PL L+VL   L G++ + W S L++L+  P  ++ D++++S+D L  LEKK
Sbjct: 193 RVIEYAKGVPLVLKVLAHMLRGKNKEVWESQLDKLKRLPVQKVHDVVKLSYDDLDRLEKK 252

Query: 245 IFLDIACFFKGND--RDYVTNFLEGCGFHPVI--GIRVLIEKCLITV-HNNTLWMHDLLQ 299
            FLDIACFF G +   DY+ + L+ C     +  G+  L +K LIT+  +N + MHD+LQ
Sbjct: 253 YFLDIACFFNGLNLKVDYMKHLLKDCDSDNYVAGGLESLKDKALITISEDNVISMHDILQ 312

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G+++V+++S E   KRSRLW  +++C VL    G++ +  I + N+    ++ L  S 
Sbjct: 313 EMGREVVRQESREHPEKRSRLWDVDDICDVLKNDKGSDAIRSIRV-NFLENRKLKL--SP 369

Query: 360 KAFSKMTNLRLLKICNL------QLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
             F KMTNL+ L             P GLE     LR L W  YPLK        +  + 
Sbjct: 370 HVFDKMTNLQFLDFWGYFDDYLDLFPQGLESFPTGLRYLHWIDYPLKSFSEKFFAENLVI 429

Query: 414 IYMCYSRIGELWKGI-KHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
           + +   R+ +LW G+ ++L  LK + +  +  L  +PDF+ A NL+ L +  C  L  +H
Sbjct: 430 LDLYLGRMEKLWCGVQQNLVNLKEVTIICASFLKELPDFSKATNLKVLSVTACDNLESVH 489

Query: 473 PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
           PS+    KL+ L++  C SL T                   T+ S L  L  LD+S  LK
Sbjct: 490 PSIFTLEKLVHLDLSSCVSLTTF------------------TSNSNLSSLHYLDLSNCLK 531

Query: 533 FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKC 592
             EF      +E++ EL L G  I  LP S    S L  LNL +   +E +  ++ NL  
Sbjct: 532 LSEFSVT---LENIVELDLSGCPINALPSSFGCQSNLETLNLSDTE-IESIHSSIKNLTR 587

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDL 617
           LR L +   +KL   PE+  S++ L
Sbjct: 588 LRKLYIRFSNKLLVLPELPSSVESL 612



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 99/421 (23%), Positives = 169/421 (40%), Gaps = 84/421 (19%)

Query: 624  GTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLG 683
             + +KE+P      T L++L+++ C NL  +  SI  L+ L  L+LS C  L        
Sbjct: 459  ASFLKELPD-FSKATNLKVLSVTACDNLESVHPSIFTLEKLVHLDLSSCVSLTTFTSN-S 516

Query: 684  QIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLS-GLCSLRKLNLTDCNLME 742
             + SL  LD+S                        LKL   S  L ++ +L+L+ C +  
Sbjct: 517  NLSSLHYLDLSN----------------------CLKLSEFSVTLENIVELDLSGCPI-- 552

Query: 743  GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
             ALPS  G   +L+ L LS     S+ +SI +L++L  + +    +L  LP+LP ++  +
Sbjct: 553  NALPSSFGCQSNLETLNLSDTEIESIHSSIKNLTRLRKLYIRFSNKLLVLPELPSSVESL 612

Query: 803  RVNGCASLVTLL------DALKLCKSDSTMIAC--LDSLKLLG-NKSLAFSMLR------ 847
             V+ C SL T+L      +  K  K       C  LD L L+    +L  ++++      
Sbjct: 613  LVDNCESLKTVLFPSTVAEQFKENKKRVEFWNCFNLDELSLINIGLNLQINLMKFTHQHL 672

Query: 848  ------EYLEAVSNTRQHLS-----VVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKL 896
                  EY E+  + + +        V PGS +P+W  Y+     + V           L
Sbjct: 673  STLEHDEYAESYVDYKDNFDSYQAVYVYPGSSVPKWLEYKTTMDGMIVDLSPLH--LSPL 730

Query: 897  VGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHI-GHGIYGIGFRDKFG---------QAG 946
            +G+  C +    K              ++ C+I    + G G +D F          +  
Sbjct: 731  LGFVFCFILPETKEY----------CKKVECNITAIDVEGDGEKDGFNIYTDLKHVYKTP 780

Query: 947  SDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQ------GLEVKMCGLHP 1000
            SDH+ ++Y   Q C      +  N   F+   V     PW  +       +++K  G+ P
Sbjct: 781  SDHVCMIY--DQPCSQHLTRIAKNQTSFKIK-VTAWTIPWFNEEDEPRREVKLKGFGMSP 837

Query: 1001 V 1001
            +
Sbjct: 838  I 838



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 67/127 (52%), Gaps = 5/127 (3%)

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
           SI  L  LV L+L +C SL     + SNL  L  L LS C KL +F     +++++ EL 
Sbjct: 491 SIFTLEKLVHLDLSSCVSLTTF-TSNSNLSSLHYLDLSNCLKLSEFS---VTLENIVELD 546

Query: 622 LDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPET 681
           L G  I  +PSS    + LE LNLSD + +  + SSI  L  L+ L +    KL  +PE 
Sbjct: 547 LSGCPINALPSSFGCQSNLETLNLSDTE-IESIHSSIKNLTRLRKLYIRFSNKLLVLPEL 605

Query: 682 LGQIESL 688
              +ESL
Sbjct: 606 PSSVESL 612


>gi|357499691|ref|XP_003620134.1| Resistance protein [Medicago truncatula]
 gi|355495149|gb|AES76352.1| Resistance protein [Medicago truncatula]
          Length = 1110

 Score =  303 bits (776), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 301/1041 (28%), Positives = 465/1041 (44%), Gaps = 247/1041 (23%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGI 91
           KTT+A  VY+ I  +FE S F + VR+   + GL+ LQ+ LLSQ++      I +V  G+
Sbjct: 12  KTTLALEVYNSIVRQFECSCFFEKVRDFK-ESGLIYLQKILLSQIVGETKMEITSVRQGV 70

Query: 92  DMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVY 151
            +L  RL +KKVLL++DDV   +QL+++AG+ +WFG GSR+IIT+RD+ LL  HG++  Y
Sbjct: 71  SILQQRLHQKKVLLLLDDVDKDEQLKAIAGSSDWFGLGSRVIITTRDKRLLTYHGIERTY 130

Query: 152 KPHGLNYDEALQLFNMKAFKT-YQPLQECVQLS--------------------------- 183
           +  GLN   A  L   KA K  Y P+ + V L                            
Sbjct: 131 EVKGLNDAAAFDLVGWKALKNDYSPIYKDVLLEQKQGRELNANELRRLKDLKNDVRFSSY 190

Query: 184 ----ARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
                R + YA GLPLALEV+GS    +++++    L+R E  P  +I   LQ+SFD LQ
Sbjct: 191 ANVLKRAVAYASGLPLALEVIGSHFFNKTIEQCNYVLDRCERVPDKKIQTTLQVSFDALQ 250

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNN-TLWMHDL 297
           + +K +FLDIAC  KG +   V   L    G      I VL+EK LI + ++  + +HDL
Sbjct: 251 DEDKFVFLDIACCLKGWNLIRVEEILHAHYGNIMKDHIDVLVEKSLIKISDSGNITLHDL 310

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL-- 355
           ++++G++IV+R+SPE  GKR+RLW  E++  V  E+TGT  ++ I     H + + ++  
Sbjct: 311 IEDMGKEIVRRESPENPGKRTRLWAYEDIKKVFKENTGTSTIKII-----HFQFDPWIEK 365

Query: 356 ---CASAKAFSKMTNLRLLKICN-LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
               +  KAF KM NLR L     +      E++ N LR+L +      +          
Sbjct: 366 KKDASDGKAFKKMKNLRTLIFSTPVCFSETSEHIPNSLRVLEYSNRNRNYY--------- 416

Query: 412 IEIYMCYSRIGEL--WKGI--KHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
                 +SR   L  W G   K    +KV+       L RMPD +  PNLE+  ++ CT 
Sbjct: 417 ------HSRGSNLFEWDGFLKKKFGNMKVLNYDCDTLLTRMPDISNLPNLEQFSIQDCTS 470

Query: 468 LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISG--- 518
           L  I  S+   +KL IL +  C +L ++P  +   SL +LN      L+S P  +SG   
Sbjct: 471 LITIDESIGFLSKLKILRLIGCHNLHSVP-PLNSASLVELNLSHCHSLESFPLVVSGFLG 529

Query: 519 -----------------------------LKC--------------LSTLDVSGDLKFRE 535
                                        L C              L T+   G  + R 
Sbjct: 530 ELKILRVIGCSKIRLIQSLVLPSLEELDLLDCTSLDSFSNMVFGDKLKTMSFRGCYELRS 589

Query: 536 FPEIVEHMEHLSELHLE--GTAIRGLPLSIELLSGLVLLN-------------------- 573
            P +   ++ L +L+L      +   PL ++ L  LVL N                    
Sbjct: 590 IPPL--KLDSLEKLYLSYCPNLVSISPLKLDSLEKLVLSNCYKLESFPSVVDGLLDKLKT 647

Query: 574 --LKNCRSLEILP------------------VTVSNLK--CLRSLKLSGCSKLKKFPEIV 611
             +KNC +L  +P                  V++S LK   L  L LS C KL+ FP +V
Sbjct: 648 LFVKNCHNLRSIPALKLDSLEKLDLLHCHNLVSISPLKLDSLEKLVLSNCYKLESFPSVV 707

Query: 612 ---------------RSMKDLSELFLDG---------TSIKEVPSSIE-LLTKLELLNLS 646
                           +++++  L LD            ++  PS ++ LL KL+ LN+ 
Sbjct: 708 DGLLNKLKTLFVKNCHNLRNIPALKLDSLEKLDLSDCYKLESFPSVVDGLLDKLKFLNIV 767

Query: 647 DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH------ 700
           +C  L  +P   ++L SL+  NLS C++LE+ PE LG++ ++  L +  T +        
Sbjct: 768 NCIMLRNIPR--LSLTSLEHFNLSCCYRLESFPEILGEMRNIPRLHLDETPIKEFPFQFQ 825

Query: 701 ----------STSWYSYIPIN--LMRKSVALKLPSLSGL-----CSLRKLNLTDCNLMEG 743
                         Y  +P    +M +S  L + +   +       ++ + + +C L + 
Sbjct: 826 TLTQPQRFVSCDCGYGRLPNRDVVMSESAELTIKAEEKMNQMQSSHVKYICVRNCKLSDE 885

Query: 744 ALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVR 803
            L   +    ++KEL+++   F  +P SI     L  I L+DCK L  +  +PP +R++ 
Sbjct: 886 YLSISLMLFANVKELHITNCQFTVIPKSIEKCQFLWKIVLDDCKELMEMKGIPPCLRELS 945

Query: 804 VNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVV 863
              C    +       CKS           KLL  K          L    NTR  L   
Sbjct: 946 ALNCILTSS-------CKS-----------KLLNQK----------LHEAGNTRFRL--- 974

Query: 864 VPGSEIPEWFMYQNE-GSSIT 883
            P ++IPEWF +Q E G SI+
Sbjct: 975 -PRAKIPEWFDHQCEAGKSIS 994


>gi|351721740|ref|NP_001235684.1| disease resistance protein [Glycine max]
 gi|223452623|gb|ACM89638.1| disease resistance protein [Glycine max]
          Length = 451

 Score =  303 bits (776), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 172/392 (43%), Positives = 240/392 (61%), Gaps = 7/392 (1%)

Query: 21  MIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS-KGGLVSLQRQLLSQLLKL 79
           ++GI G GG+GKTT+A+ +YD I  +F+ + FL NV E S+ K  L  LQ +LLS++L+ 
Sbjct: 27  LLGIHGTGGIGKTTLAKALYDSIYKQFDGTSFL-NVGETSNPKTDLKHLQEKLLSEILE- 84

Query: 80  ADNSIW-NVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
            D   W N+ +G   +  RL  K+VL+V+D+V D+KQL +LAG   WFG GSRIIIT+RD
Sbjct: 85  DDKIHWRNIEEGTAKIERRLGFKRVLIVLDNVDDIKQLNNLAGKCAWFGPGSRIIITTRD 144

Query: 139 EHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALE 198
           +HLL    V++ Y+   L+  E+L+LF   AF+   P      LS R +    GLPLALE
Sbjct: 145 KHLLDLGEVEKRYEVKMLDEKESLELFCHYAFRKSCPESNYKDLSNRAMSCCKGLPLALE 204

Query: 199 VLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDR 258
           VLGS L  ++VD W+  L+R E  P   +  +L+IS+D L   EK IFLD+ACFFKG   
Sbjct: 205 VLGSHLFKKNVDVWKDALDRYEKSPHGNVQKVLRISYDSLFRHEKSIFLDVACFFKGQRL 264

Query: 259 DYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRS 318
           DYV   L+   F    GI  L+ K L+TV  + LWMHDL+Q++G++IV+ ++  ++G+RS
Sbjct: 265 DYVKTVLDASDFSSGDGITTLVNKSLLTVDYDCLWMHDLIQDMGREIVKEKAYNKIGERS 324

Query: 319 RLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQL 378
           RLW  E+V  VL +  G+  +EGI+LD  H +    +      F KM NLR+L + N   
Sbjct: 325 RLWHHEDVLQVLEDDNGSSEIEGIMLDPPHRKE---INCIDTVFEKMKNLRILIVRNTSF 381

Query: 379 PNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDK 410
            +   YL   LRLL W+ YP K LPS     K
Sbjct: 382 SHEPRYLPKNLRLLDWKNYPSKSLPSEFNPTK 413


>gi|356561381|ref|XP_003548960.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 873

 Score =  303 bits (776), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 247/636 (38%), Positives = 359/636 (56%), Gaps = 34/636 (5%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++SR   +  L+D     V M+GI G+GG+GKTTIAR VY+LI+ +FE   FLDNVRE S
Sbjct: 192 LESRVLHVTSLLDDKYDGVLMVGIHGIGGVGKTTIAREVYNLIADQFEWLCFLDNVRENS 251

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            K GLV LQ+ LLS+ +  +   + +V +GI ++  R   KKVLLV+DDV D+ QLQ++ 
Sbjct: 252 IKHGLVHLQKTLLSKTIGESSIKLGSVHEGIPIIKHRFLLKKVLLVVDDVDDLDQLQAIV 311

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G  +WFGS SR+IIT+RD+HLL  HGV   Y+  GLN +EAL+L +  AFK  +     +
Sbjct: 312 GGTDWFGSASRVIITTRDKHLLTCHGVTSTYEVDGLNKEEALKLLSGTAFKIDKVDPCYM 371

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           ++  R++ YA GLPLAL V+GS L G+S++EW S++++ E  P  +I D+L++SFD L+E
Sbjct: 372 RILNRVVTYASGLPLALMVIGSNLFGKSIEEWESSIDQYERIPNKKIQDVLKVSFDSLEE 431

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
            E++IFLDIAC FKG    YV   L     F P   I VLI+K LI V  + + +HDL++
Sbjct: 432 DEQQIFLDIACCFKGYALTYVKEILSTHHNFCPEYAIGVLIDKSLIKVDADRVILHDLIE 491

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           ++G++IV+++SP E GKRSRLW  +++  VL E+ G   ++ I LD   +E  V      
Sbjct: 492 DMGKEIVRQESPREPGKRSRLWFPDDIVEVLEENKGISRIQMITLDYLKYEAAVEW--DG 549

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
            AF +M NL+ L I +  L  G  +L N LR+L W+ YP   LP +    K + +   YS
Sbjct: 550 VAFKEMNNLKTLIIRSGCLHEGPIHLPNSLRVLEWKVYPSPSLPIDFNPKKLVILKFPYS 609

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGA-PNLEKLILEGCTRLYEIHPSLLLH 478
                   +  LD LK   LS+  +L   P+  G   N+  L + G T + E+  S+   
Sbjct: 610 -------CLMSLDVLKSKKLSYCHSLESFPEVLGKMENVTSLDIYG-TVIKELPFSIQNL 661

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPE 538
            +L  L +  C +L  + G  +  +LE  ++K      S LK         DL     P 
Sbjct: 662 TRLRRLELVRCENLEQIRG--VPPNLETFSVKD----CSSLK---------DLDLTLLPS 706

Query: 539 IVEHMEHLSELHLEGTA----IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
             +    L EL L G      I+G+ LSIE+LS     +LK+   L +LP        L+
Sbjct: 707 WTKERHLLKELRLHGNKNLQNIKGIQLSIEVLSVEYCTSLKDL-DLTLLPSWTKERHLLK 765

Query: 595 SLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEV 630
            L L G   L+K   I  S++ LS  +   TS+K+V
Sbjct: 766 ELHLHGNKNLQKIKGIPLSIEVLSVEYC--TSLKDV 799



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 116/252 (46%), Gaps = 43/252 (17%)

Query: 576 NCRSLEILPVTVS---NLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPS 632
           N + L IL    S   +L  L+S KLS C  L+ FPE++  M++++ L + GT IKE+P 
Sbjct: 597 NPKKLVILKFPYSCLMSLDVLKSKKLSYCHSLESFPEVLGKMENVTSLDIYGTVIKELPF 656

Query: 633 SIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLEN-----VPETLGQIES 687
           SI+ LT+L  L L  C+NL ++        +L+T ++  C  L++     +P    +   
Sbjct: 657 SIQNLTRLRRLELVRCENLEQIRG---VPPNLETFSVKDCSSLKDLDLTLLPSWTKERHL 713

Query: 688 LEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPS 747
           L+EL + G               N+    +++++ S+    SL+ L+LT        LPS
Sbjct: 714 LKELRLHGNKNLQ----------NIKGIQLSIEVLSVEYCTSLKDLDLT-------LLPS 756

Query: 748 DIGNLCSLKELYLSKN----SFVSLPTSITHLSKLLNIELEDCKRLQSLP-QLPPNIRQV 802
                  LKEL+L  N        +P SI  LS      +E C  L+ +   LPP   Q 
Sbjct: 757 WTKERHLLKELHLHGNKNLQKIKGIPLSIEVLS------VEYCTSLKDVDVTLPPACTQ- 809

Query: 803 RVNGCASLVTLL 814
               C  L TL 
Sbjct: 810 ---ECCILSTLF 818


>gi|334185068|ref|NP_187072.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332640533|gb|AEE74054.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 867

 Score =  303 bits (775), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 234/711 (32%), Positives = 362/711 (50%), Gaps = 108/711 (15%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M    EK++ L+D  S +++ IGI G  G+GKTTIAR +Y+  S +F+ S F+++++   
Sbjct: 240 MGDHMEKMKPLLDIDSDEMKTIGIWGPPGVGKTTIARSLYNQHSDKFQLSVFMESIKTAY 299

Query: 61  SKGGL-------VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDV 113
           +           + LQ++ LSQ+    +  I +    + +   RL  KKVL+VIDDV   
Sbjct: 300 TIPACSDDYYEKLQLQQRFLSQITNQENVQIPH----LGVAQERLNDKKVLVVIDDVNQS 355

Query: 114 KQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY 173
            Q+ +LA   +W G GSRIIIT++D  +L+ HG++ +Y+    NY+EALQ+F M AF   
Sbjct: 356 VQVDALAKENDWLGPGSRIIITTQDRGILRAHGIEHIYEVDYPNYEEALQIFCMHAFGQK 415

Query: 174 QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
            P     +L+ ++   +G LPL L+V+GS+  G +  EW   L R+      +I  IL++
Sbjct: 416 SPYDGFEELAQQVTTLSGRLPLGLKVMGSYFRGMTKQEWTMALPRVRTHLDGKIESILKL 475

Query: 234 SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPV-IGIRVLIEKCLITVHNNTL 292
           S+D L +++K +FL +AC F  +D + V   L G  F  +  G+ VL EK LI +    +
Sbjct: 476 SYDALCDVDKSLFLHLACSFHNDDTELVEQQL-GKKFSDLRQGLHVLAEKSLIHMDLRLI 534

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            MH LL +LG++IV++QS  E G+R  L    ++  VLT+ TG+  V GI  D    E E
Sbjct: 535 RMHVLLAQLGREIVRKQSIHEPGQRQFLVDATDIREVLTDDTGSRSVIGIDFDFNTMEKE 594

Query: 353 VYLCASAKAFSKMTNLRLLKIC-NLQLPNGLEYLSNR---------LRLLGWRGYPLKFL 402
             L  S KAF  M+NL+ ++I  +L   +G+ Y   R          +L   RG  L +L
Sbjct: 595 --LDISEKAFRGMSNLQFIRIYGDLFSRHGVYYFGGRGHRVSLDYDSKLHFPRG--LDYL 650

Query: 403 PSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
           P  L            S++ +LW+GI+ L  L+ + L+ S NL  +PD + A NL++L +
Sbjct: 651 PGKL------------SKLEKLWEGIQPLRNLEWLDLTCSRNLKELPDLSTATNLQRLSI 698

Query: 463 EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI-LMKSLEKLNLKSLPTTISGLKC 521
           E                         C+SL+ LP  I    +L+K+NL+         +C
Sbjct: 699 E------------------------RCSSLVKLPSSIGEATNLKKINLR---------EC 725

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
           LS ++                                LP S   L+ L  L+L+ C SL 
Sbjct: 726 LSLVE--------------------------------LPSSFGNLTNLQELDLRECSSLV 753

Query: 582 ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKL 640
            LP +  NL  + SL+   CS L K P    ++ +L  L L + +S+ E+PSS   LT L
Sbjct: 754 ELPTSFGNLANVESLEFYECSSLVKLPSTFGNLTNLRVLGLRECSSMVELPSSFGNLTNL 813

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
           ++LNL  C  LV LPSS + L +L+ L+L  C  L  +P + G +  L+ L
Sbjct: 814 QVLNLRKCSTLVELPSSFVNLTNLENLDLRDCSSL--LPSSFGNVTYLKRL 862



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 111/196 (56%), Gaps = 10/196 (5%)

Query: 602 SKLKKFPEIVRSMKDLSELFLD-GTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           SKL+K  E ++ +++L  L L    ++KE+P  +   T L+ L++  C +LV+LPSSI  
Sbjct: 655 SKLEKLWEGIQPLRNLEWLDLTCSRNLKELPD-LSTATNLQRLSIERCSSLVKLPSSIGE 713

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDI----SGTAVPHSTSWYSYI-PINLMRK 715
             +LK +NL  C  L  +P + G + +L+ELD+    S   +P S    + +  +     
Sbjct: 714 ATNLKKINLRECLSLVELPSSFGNLTNLQELDLRECSSLVELPTSFGNLANVESLEFYEC 773

Query: 716 SVALKLPSLSG-LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSIT 773
           S  +KLPS  G L +LR L L +C+ M   LPS  GNL +L+ L L K ++ V LP+S  
Sbjct: 774 SSLVKLPSTFGNLTNLRVLGLRECSSMV-ELPSSFGNLTNLQVLNLRKCSTLVELPSSFV 832

Query: 774 HLSKLLNIELEDCKRL 789
           +L+ L N++L DC  L
Sbjct: 833 NLTNLENLDLRDCSSL 848



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 88/150 (58%), Gaps = 12/150 (8%)

Query: 674 KLENVPETLGQIESLEELDISGT----AVPHSTSWYSYIPINLMRKSVALKLPSLSG-LC 728
           KLE + E +  + +LE LD++ +     +P  ++  +   +++ R S  +KLPS  G   
Sbjct: 656 KLEKLWEGIQPLRNLEWLDLTCSRNLKELPDLSTATNLQRLSIERCSSLVKLPSSIGEAT 715

Query: 729 SLRKLNLTDC-NLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELEDC 786
           +L+K+NL +C +L+E  LPS  GNL +L+EL L + +S V LPTS  +L+ + ++E  +C
Sbjct: 716 NLKKINLRECLSLVE--LPSSFGNLTNLQELDLRECSSLVELPTSFGNLANVESLEFYEC 773

Query: 787 KRLQSLPQLPPNIRQVRVNG---CASLVTL 813
             L  LP    N+  +RV G   C+S+V L
Sbjct: 774 SSLVKLPSTFGNLTNLRVLGLRECSSMVEL 803


>gi|227438149|gb|ACP30564.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1084

 Score =  303 bits (775), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 237/710 (33%), Positives = 349/710 (49%), Gaps = 129/710 (18%)

Query: 4   RCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK- 62
           R  +++ LM  G  DV++IGI GM G+G++                  FL+N R+   + 
Sbjct: 195 RVGRIKELMCFGLDDVQIIGIWGMAGIGRS------------------FLENFRDYFKRP 236

Query: 63  GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGN 122
            G + LQ++LLS +L+  D + +N  D    +  R + K+  L                 
Sbjct: 237 DGKLHLQKKLLSDILR-KDEAAFNNMD--HAVKQRFRNKRSSLT---------------- 277

Query: 123 REWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQL 182
                                         P  LN DEAL L +  AF++ +P +E +Q 
Sbjct: 278 ------------------------------PKELNADEALDLVSWHAFRSSEPPEEFLQF 307

Query: 183 SARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELE 242
             R++ Y GGLPLA+EVLG+FL  RSV EW+STL+ L+  P   I   LQISFD L  L+
Sbjct: 308 PKRLVEYCGGLPLAMEVLGAFLYKRSVSEWKSTLKALKRIPDDNIQAKLQISFDALNALQ 367

Query: 243 KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELG 302
           K IFLDI+CFF G D+DYV   L+GC   PV G++VL E+CLIT+H+N L MHDLL+++G
Sbjct: 368 KDIFLDISCFFIGMDKDYVDCILDGCELEPVAGLKVLKERCLITIHDNRLMMHDLLRDMG 427

Query: 303 QQIVQRQSPEELGKR---SRLWKEEEVCHVLTESTGTE------LVEGIVLDNYHHENEV 353
           + IVQ  S + +  R   SRLW    V  VL   +GT+       +EG+ L     + EV
Sbjct: 428 RYIVQGTSKKHVKNRVKWSRLWDRVHVIDVLENYSGTDANHPNHAIEGLSL-----KAEV 482

Query: 354 YLCAS--AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKT 411
               +   KAFS +  LRLL++ ++ L    E     LR L W G+P + +P NL +   
Sbjct: 483 TAVENLEVKAFSNLRRLRLLQLSHVVLNGSYENFPKGLRWLCWLGFPEESIPINLHLRSL 542

Query: 412 IEIYMCYSRIGELWKGIKH--LDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLY 469
           + + M  S +  LW    H  L +LK + LSHS  L   PDF+  PNLEKL L  C RL 
Sbjct: 543 VVMDMQNSNLKRLWDQKPHDSLKELKYLDLSHSIQLTETPDFSYLPNLEKLFLINCQRLA 602

Query: 470 EIHPSL-LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVS 528
           ++H S+ +L   LI+LN+  C                 + L  LP  +  LK L TL +S
Sbjct: 603 KVHESIKVLQGSLILLNLSGC-----------------IKLGELPLELYTLKLLETLILS 645

Query: 529 GDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE------- 581
           G  +     + +  +E L+ L  + TAI  +P S + L     L+L  C+ L        
Sbjct: 646 GCSQLERLDDALGELESLTILKADYTAITQIPSSSDQLKE---LSLHGCKELWKDRQYTN 702

Query: 582 ---------ILPVTVSNLKCLRSLKLSGCSKLKKF-PEIVRSMKDLSELFLDGTSIKEVP 631
                    + P++++ L CLR+L+L  C+   +  P  + S+  L EL L G + + + 
Sbjct: 703 SDESSQVALLSPLSLNGLICLRTLRLGYCNLSDELVPVNLGSLSSLEELDLQGNNFRNLQ 762

Query: 632 SSIELLTKLELLNLSDCKNLVRLPSSIIAL-KSLKTLNLSGCFKLENVPE 680
           +    L  L++L L +C  L     S+ +L K L++L    C  LE  P+
Sbjct: 763 TDFAGLPSLQILKLDNCSEL----RSMFSLPKKLRSLYARNCTVLERTPD 808



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 123/390 (31%), Positives = 188/390 (48%), Gaps = 42/390 (10%)

Query: 553 GTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSN-LKCLRSLKLSGCSKLKKFPEIV 611
           G     +P+++ L S LV+++++N     +      + LK L+ L LS   +L + P+  
Sbjct: 527 GFPEESIPINLHLRS-LVVMDMQNSNLKRLWDQKPHDSLKELKYLDLSHSIQLTETPDF- 584

Query: 612 RSMKDLSELFL-DGTSIKEVPSSIELLT-KLELLNLSDCKNLVRLPSSIIALKSLKTLNL 669
             + +L +LFL +   + +V  SI++L   L LLNLS C  L  LP  +  LK L+TL L
Sbjct: 585 SYLPNLEKLFLINCQRLAKVHESIKVLQGSLILLNLSGCIKLGELPLELYTLKLLETLIL 644

Query: 670 SGCFKLENVPETLGQIESLEELDISGTAV---PHSTS-------------WYSYIPINLM 713
           SGC +LE + + LG++ESL  L    TA+   P S+              W      N  
Sbjct: 645 SGCSQLERLDDALGELESLTILKADYTAITQIPSSSDQLKELSLHGCKELWKDRQYTNSD 704

Query: 714 RKS-VALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTS 771
             S VAL  P SL+GL  LR L L  CNL +  +P ++G+L SL+EL L  N+F +L T 
Sbjct: 705 ESSQVALLSPLSLNGLICLRTLRLGYCNLSDELVPVNLGSLSSLEELDLQGNNFRNLQTD 764

Query: 772 ITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTM----- 826
              L  L  ++L++C  L+S+  LP  +R +    C  L    D LK C    ++     
Sbjct: 765 FAGLPSLQILKLDNCSELRSMFSLPKKLRSLYARNCTVLERTPD-LKECSVLQSLHLTNC 823

Query: 827 -----IACLDSLKLLGN------KSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMY 875
                   L+ LK +G        ++ +S  RE +        +  V VPGS IP+W  +
Sbjct: 824 YNLVETPGLEELKTVGVIHMEMCNNVPYSD-RERIMQGWAVGANGGVFVPGSTIPDWVNF 882

Query: 876 QNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
           +N   SI+ T P    N   LVG+ +   +
Sbjct: 883 KNGTRSISFTVPEPTLN-SVLVGFTVWTTY 911


>gi|7488170|pir||D71437 probable resistance gene - Arabidopsis thaliana
          Length = 2467

 Score =  303 bits (775), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 306/1098 (27%), Positives = 510/1098 (46%), Gaps = 195/1098 (17%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +++  E ++ ++   S + RM+GI G  G+GK+TI R ++  +S +F    FL       
Sbjct: 26   IEAHIEAIKSVLCLESKEARMVGIWGQSGIGKSTIGRALFSQLSIQFPLRAFLTYKSTSG 85

Query: 61   S--KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            S   G  +S +++LLS++L   D  I    +   ++  RL+ KKVL+++DDV +++ L++
Sbjct: 86   SDVSGMKLSWEKELLSEILGQKDIKI----EHFGVVEQRLKHKKVLILLDDVDNLEFLKT 141

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            L G  EWFGSGSRII+ ++D   LK H +D VY+    +   AL +    AF    P  +
Sbjct: 142  LVGKAEWFGSGSRIIVITQDRQFLKAHDIDLVYEVKLPSQGLALTMLCRSAFGKDSPPDD 201

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
              +L+  + + AG LPL L VLGS L  R   EW   + RL      +I+  L++S+D L
Sbjct: 202  FKELAFEVAKLAGHLPLGLNVLGSSLRRRGKKEWMEMMPRLRNGLNGDIMKTLRVSYDRL 261

Query: 239  QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDL 297
             + ++ I              YV + LE       +G+ +L EK LI +  +  + MH+L
Sbjct: 262  HQKDQDI--------------YVKDLLEDN-----VGLTMLSEKSLIRITPDGHIEMHNL 302

Query: 298  LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
            L++LG++I + +S    GKR  L   E++  V+TE TGTE + GI L    + +   L  
Sbjct: 303  LEKLGREIDRAKSKGNPGKRQFLTNFEDIHEVVTEKTGTETLLGIRLPFEEYFSTRPLLI 362

Query: 358  SAKAFSKMTNLRLLKICNLQ---LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
              ++F  M NL+ LKI +      P  L YL  +LRLL W   PLK LPS  + +  + +
Sbjct: 363  DKESFKGMRNLQYLKIGDWSDGGQPQSLVYLPLKLRLLDWDDCPLKSLPSTFKAEYLVNL 422

Query: 415  YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
             M YS++ +LW+G   L  LK M L  S+NL  +PD + A NLE+L LEGC  L  +  S
Sbjct: 423  IMKYSKLEKLWEGTLPLGSLKKMNLLCSKNLKEIPDLSNARNLEELDLEGCESLVTLPSS 482

Query: 475  LL-------LH-NKLIILNMKD----CTS-LITLPGKILMKSLEKLNLKSLPTTISGLKC 521
            +        LH + +I++++K     CT  ++  P K+ +       LK L +       
Sbjct: 483  IQNAIKLRKLHCSGVILIDLKSLEGMCTQGIVYFPSKLRLLLWNNCPLKRLHSNFKVEYL 542

Query: 522  LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTA----IRGLPLSIELLSG---LVLLNL 574
            +     + DL+  +  +  + +  L ++ L G+     I  L L+I L      L+ L++
Sbjct: 543  VKLRMENSDLE--KLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLEENAIKLIYLDI 600

Query: 575  KNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS-------- 626
             +C+ LE  P  + NL+ L  L L+GC  L+ FP I     D+   F +G +        
Sbjct: 601  SDCKKLESFPTDL-NLESLEYLNLTGCPNLRNFPAIKMGCSDVD--FPEGRNEIVVEDCF 657

Query: 627  -IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQI 685
              K +P+ ++ L         DC  L+R        + L  LN+  C+K E + E +  +
Sbjct: 658  WNKNLPAGLDYL---------DC--LMRCMPCEFRPEYLVFLNVR-CYKHEKLWEGIQSL 705

Query: 686  ESLEELDISG----TAVPHSTSWYSYIPINLMRKSVALKLPSLSG-LCSLRKLNLTDCNL 740
             SLEE+D+S     T +P  +   +   + L      + LPS  G L  L +L + +C  
Sbjct: 706  GSLEEMDLSESENLTEIPDLSKATNLKHLYLNNCKSLVTLPSTIGNLQKLVRLEMKECTG 765

Query: 741  MEGALPSDIGNLCSLKELYLS--------------------KNSFVSLPTSITHLSKLLN 780
            +E  LP+D+ NL SL+ L LS                    +N+ +     ++  +KL +
Sbjct: 766  LE-VLPTDV-NLSSLETLDLSGCSSLRTFPLISKSIKWLYLENTAIEEILDLSKATKLES 823

Query: 781  IELEDCKRLQSLPQLPPNIRQVR--------------------------VNGCASLVTLL 814
            + L +CK L +LP    N++ +R                          ++GC++   ++
Sbjct: 824  LILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDVNLSSLGILDLSGCSNCRGVI 883

Query: 815  DALKLCKSDSTMIACL-DSLKL-------------------------LGNKSLAFSMLRE 848
             AL    SD+T++A + DS+                           LG +  +F   R 
Sbjct: 884  KAL----SDATVVATMEDSVSCVPLSENIEYTCERFWGELYGDGDWDLGTEYFSF---RN 936

Query: 849  YLEAVSNTRQHL------SVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAIC 902
              +   + R+ +       V +PG EIP++F Y+  G S+TVT P +  + +  + +  C
Sbjct: 937  CFKLDRDARELILRSCFKPVALPGGEIPKYFTYRAYGDSLTVTLPRSSLS-QSFLRFKAC 995

Query: 903  CVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQ------AGSDHLW----- 951
             V   L   +G   F  Y        +  G  G  ++  F +        +DHL+     
Sbjct: 996  LVVDPLSEGKG---FYRY------LEVNFGFNGKQYQKSFLEDEELEFCKTDHLFFCSFK 1046

Query: 952  -------LLYLSRQTCYD 962
                   L+Y+S++T Y+
Sbjct: 1047 IKECGVRLMYVSQETEYN 1064



 Score =  294 bits (753), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 256/828 (30%), Positives = 402/828 (48%), Gaps = 118/828 (14%)

Query: 7    KLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS--KGG 64
            KL+  ++S  + + M+GI G  G+GK+TI R ++  +S +F    F+       S   G 
Sbjct: 1320 KLKLCLESKEARI-MVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGSDVSGM 1378

Query: 65   LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNRE 124
             +S +++LLS++L   D  I    +   ++  RL+ KKVL+++DDV +++ L++L G  E
Sbjct: 1379 KLSWEKELLSEILGQKDIKI----EHFGVVEQRLKHKKVLILLDDVDNLEFLRTLVGKAE 1434

Query: 125  WFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSA 184
            WFGSGSRII+ ++D  LLK H +D +Y+    +   AL++    AF  Y P  +  +L+ 
Sbjct: 1435 WFGSGSRIIVITQDRQLLKAHEIDLIYEVKLPSQGLALKMICQYAFGKYSPPDDFKELAF 1494

Query: 185  RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKK 244
             + + AG LPL L VLGS L  RS +EW   L  L+     +I+  L++S+  L   ++ 
Sbjct: 1495 EVAKLAGNLPLGLSVLGSSLKRRSKEEWMEMLAELQNGLNRDIMKTLRVSYVRLDPKDQD 1554

Query: 245  IFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQ 303
            IF  IA  F G     + +FL G G +  I ++ L +K LI +  N+T+ MH+LLQ+L  
Sbjct: 1555 IFHYIAWLFNGWKVKSIKDFL-GDGVNVNIRLKTLDDKSLIRLTPNDTIEMHNLLQKLAT 1613

Query: 304  QIVQRQSPEELGKRSRLWKEEEVCHVLTEST-------------------GTELVEGIVL 344
            +I + +S    GKR  L   EE+  V T++T                   GTE + GI  
Sbjct: 1614 EIDREESNGNPGKRRFLENAEEILDVFTDNTVSFCSLMHHFILIQRLAFDGTEKLLGIDF 1673

Query: 345  DNYHHE--NEVYLCASAKAFSKMTNLRLLKI----------CNLQLPNGLEYLSNRLRLL 392
                    ++ ++     +F  M NL+ L I            L+LPNGL YL  +L+ L
Sbjct: 1674 STSSDSQIDKPFISIDENSFQGMLNLQFLNIHDHYWWQPRETRLRLPNGLVYLPRKLKWL 1733

Query: 393  GWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFT 452
             W   PLK LPSN + +  +E+ M  S + +LW G + L  LK M L +S NL  +PD +
Sbjct: 1734 RWENCPLKRLPSNFKAEYLVELRMENSALEKLWNGTQPLGSLKKMNLRNSNNLKEIPDLS 1793

Query: 453  GAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSL-------- 504
             A NLE+L L  C  L E  PS L    L  LN+  C  L   P +I+M+S         
Sbjct: 1794 LATNLEELDLCNCEVL-ESFPSPLNSESLKFLNLLLCPRLRNFP-EIIMQSFIFTDEIEI 1851

Query: 505  ---EKLNLKSLPTTISGLKC-------------LSTLDVSGDLKFREFPEIVEHMEHLSE 548
               + L  K+LP  +  L C             L  L V G+    +  E V+ +  L  
Sbjct: 1852 EVADCLWNKNLP-GLDYLDCLRRCNPSKFRPEHLKNLTVRGNNMLEKLWEGVQSLGKLKR 1910

Query: 549  LHLEG------------------------TAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
            + L                           ++  LP +I  L  L  LN++ C  L++LP
Sbjct: 1911 VDLSECENMIEIPDLSKATNLEILDLSNCKSLVMLPSTIGNLQKLYTLNMEECTGLKVLP 1970

Query: 585  VTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLN 644
            + + NL  L ++ L GCS L+  P+I +S+  L+   LD T+I+EVP   E  ++L  L+
Sbjct: 1971 MDI-NLSSLHTVHLKGCSSLRFIPQISKSIAVLN---LDDTAIEEVP-CFENFSRLMELS 2025

Query: 645  LSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSW 704
            +  CK+L R P       S++ LNL+    +E VP  + +   L+ L++SG         
Sbjct: 2026 MRGCKSLRRFPQ---ISTSIQELNLADT-AIEQVPCFIEKFSRLKVLNMSGCK------- 2074

Query: 705  YSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNL 752
                    M K+++   P++  L  L K++ TDC  +  AL   +  +
Sbjct: 2075 --------MLKNIS---PNIFRLTRLMKVDFTDCGGVITALSDPVTTM 2111



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 124/288 (43%), Gaps = 52/288 (18%)

Query: 544  EHLSELHLEGTAIRGL-----PL------------------SIELLSGLVLLNLKNCRSL 580
            E+L EL +E +A+  L     PL                   + L + L  L+L NC  L
Sbjct: 1750 EYLVELRMENSALEKLWNGTQPLGSLKKMNLRNSNNLKEIPDLSLATNLEELDLCNCEVL 1809

Query: 581  EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
            E  P  + N + L+ L L  C +L+ FPEI+      S +F D   I EV   +     L
Sbjct: 1810 ESFPSPL-NSESLKFLNLLLCPRLRNFPEIIMQ----SFIFTDEIEI-EVADCL-WNKNL 1862

Query: 641  ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
              L+  DC  L R   S    + LK L + G   LE + E +  +  L+ +D+S      
Sbjct: 1863 PGLDYLDC--LRRCNPSKFRPEHLKNLTVRGNNMLEKLWEGVQSLGKLKRVDLSEC---- 1916

Query: 701  STSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
                              +++P LS   +L  L+L++C  +   LPS IGNL  L  L +
Sbjct: 1917 ---------------ENMIEIPDLSKATNLEILDLSNCKSLV-MLPSTIGNLQKLYTLNM 1960

Query: 761  SKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCA 808
             + + + +     +LS L  + L+ C  L+ +PQ+  +I  + ++  A
Sbjct: 1961 EECTGLKVLPMDINLSSLHTVHLKGCSSLRFIPQISKSIAVLNLDDTA 2008


>gi|357469227|ref|XP_003604898.1| Nbs-lrr resistance protein [Medicago truncatula]
 gi|355505953|gb|AES87095.1| Nbs-lrr resistance protein [Medicago truncatula]
          Length = 1191

 Score =  302 bits (774), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 179/445 (40%), Positives = 268/445 (60%), Gaps = 37/445 (8%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
            ++SR + +  L++   SDV ++GI GMGG GKTTIA+ +Y+ I  +FE   FL  VRE  
Sbjct: 773  LESRVDTVIKLLNIKKSDVLLLGIWGMGGTGKTTIAKAIYNQIGSKFEGMSFLLGVREFW 832

Query: 60   SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
             +   LVSLQ+Q+L  + K   + I ++  G  +L  RL +K                  
Sbjct: 833  ETHTNLVSLQQQVLCDVYKTTTSKIHDIESGKIILKQRLAQK------------------ 874

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
              +REWFGSGSRIIIT+RD  LL++   D++Y    ++  E+L+LF+  AFK   P  + 
Sbjct: 875  --SREWFGSGSRIIITTRDMRLLRS--CDQLYAIKEMDESESLELFSWHAFKLPSPPIDF 930

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
               S  +I Y+G LPLALEVLGS+LS   + EW+  LE+L+  P  ++   L++SFDGL+
Sbjct: 931  ATHSTDVIAYSGRLPLALEVLGSYLSDCEITEWQKVLEKLKCIPHDQVQKKLRVSFDGLK 990

Query: 240  EL-EKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDL 297
            ++ E++IFLDIACFF G D++ V   L GCGF    G+++L+E+ L+TV N N L +HDL
Sbjct: 991  DVTEQQIFLDIACFFIGMDQNDVIQILNGCGFFADSGMKILLERSLVTVDNGNKLRVHDL 1050

Query: 298  LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTEST---GTELVEGIVLDNYHHENEVY 354
            L+++G+QI+  +SP +   RSRLW+ +EV  +L   +   G E V+G+ L  +  EN V 
Sbjct: 1051 LRDMGRQIIYEESPLDPENRSRLWRSDEVIDMLYNDSNLKGAEAVKGLAL-KFPKENLVR 1109

Query: 355  LCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
            L  ++ AF KM  LRLL++  ++L    ++LS  LR L W G+PL ++P+  Q +  + I
Sbjct: 1110 L--NSNAFQKMYKLRLLQLAGVKLKGDFKHLSRNLRWLYWHGFPLTYIPAEFQQESLVAI 1167

Query: 415  YMCYSRIGELWKGIKHLDKLKVMIL 439
             + YS + + WK      K KV IL
Sbjct: 1168 ELKYSNLTQTWK------KNKVQIL 1186



 Score =  204 bits (520), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/310 (37%), Positives = 188/310 (60%), Gaps = 11/310 (3%)

Query: 12  MDSGSSDV----------RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS 61
           ++SG+ DV           ++GI GM G+GK++I   + + I   FE   FL+N   +  
Sbjct: 275 INSGAQDVIQLLKQSKSPLILGIWGMPGIGKSSIVHAICNQIGPYFEHMSFLENAEGLWK 334

Query: 62  KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAG 121
               V L+ +L+  + +  + +I        +   +L+ K+VLL++D+V  + QL++L G
Sbjct: 335 DKLQVYLEEELIFHIDEQFERNISTTEARRMISKEKLRHKRVLLILDNVDKLDQLKALCG 394

Query: 122 NREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQ 181
           NREWFG GS+IIIT+RD HLLK HGVD +Y    L+  E+L+LFN+ AF+     ++ V+
Sbjct: 395 NREWFGRGSKIIITTRDRHLLKKHGVDYIYGVKQLDESESLELFNLGAFRQATSGKDFVE 454

Query: 182 LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQEL 241
           LS +++ Y+GGLPLAL+VLGS L  + VD W S L  L++ P  E+  +L+ SF+ L ++
Sbjct: 455 LSRQVVAYSGGLPLALKVLGSNLYSKRVDFWESELHLLKMFPLQEVQRVLEDSFNDLSDV 514

Query: 242 EKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQE 300
           E+++FLDIA FF G +++ V   L        + I +L +K  +T+  NN L MH LLQ 
Sbjct: 515 ERRVFLDIALFFIGMNQNDVLETLNRSTQCTDLQISLLQDKSFVTIDENNNLQMHVLLQS 574

Query: 301 LGQQIVQRQS 310
           + + +++R+S
Sbjct: 575 MARDVIRRKS 584


>gi|145326644|ref|NP_001077769.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12324936|gb|AAG52415.1|AC011622_3 putative disease resistance protein; 17840-13447 [Arabidopsis
           thaliana]
 gi|332196021|gb|AEE34142.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1131

 Score =  302 bits (774), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 224/671 (33%), Positives = 349/671 (52%), Gaps = 56/671 (8%)

Query: 21  MIGICGMGGLGKTTIARVVYDLISHEFEASGFLD----NVREISSKGGLVSLQRQLLSQL 76
           +IGI G  G+GK+TIAR +   +S  F+ + F+D        +   G  + LQ QLL+++
Sbjct: 215 IIGISGPAGIGKSTIARALESRLSDRFQLTCFMDLRGSENNGLHDYGQQLRLQEQLLAKV 274

Query: 77  LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITS 136
           L      I +    + +L  RL   +VL+++DDV D+KQL++LA    WFG GSRII+T+
Sbjct: 275 LNQDGTRICH----LGVLQQRLSDLRVLIILDDVSDIKQLKALAKETTWFGPGSRIIVTT 330

Query: 137 RDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLA 196
            ++ LL+  G+D  Y     + +EAL++F   AF+   P     +L+ARI    G LPL 
Sbjct: 331 ENKDLLQQRGIDSTYHVGFPSREEALEIFCKFAFEQSSPPHAFEKLAARITHLCGNLPLG 390

Query: 197 LEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGN 256
           L V+GS L G+  DEW   + RLE  P  EI D+L++ ++ L E ++ +FL IA FF   
Sbjct: 391 LCVMGSSLFGKKQDEWEFVVHRLETNPGQEIDDVLRVGYERLHENDQMLFLHIAIFFNYR 450

Query: 257 DRDYVTNFLEGCGFHPVIG-IRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPEEL 314
           DRD V   L   G   V   ++ LI K LI ++    + MH LLQ++G+Q ++RQ P   
Sbjct: 451 DRDLVEAMLADDGNLDVGNWLKFLINKSLIEIYRTGQIVMHKLLQQVGRQAIRRQEP--- 507

Query: 315 GKRSRLWKEEEVCHVLTESTGTEL-VEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI 373
            KR  L    E+C +L    GT   V GI  D     +EV +C    AF ++ +LR L +
Sbjct: 508 WKRQILINANEICDLLRYEKGTSCNVSGISFDT-SGISEVTICDG--AFKRLHDLRFLHV 564

Query: 374 CN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELW 425
                     + +P  +E+   RLRLL W  YP K LP    ++  +E+ M  S + +LW
Sbjct: 565 YKSRDDGNNRVHIPEKVEF-PPRLRLLHWAAYPSKSLPPTFNLECLVELNMRESLVEKLW 623

Query: 426 KGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILN 485
           +G +HL  LK M L+ S+NL  +PD + A NLE   L+ C  L EI  S    +KL  L 
Sbjct: 624 EGTQHLKNLKYMDLTESKNLKELPDLSNATNLEYFYLDNCESLVEIPSSFAHLHKLEWLE 683

Query: 486 MKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEH 545
           M +C +L  +P  + + S++++N+K                  G  + R+FP I  H+E 
Sbjct: 684 MNNCINLQVIPAHMNLTSVKQVNMK------------------GCSRLRKFPVISRHIEA 725

Query: 546 LSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
           L     + T +  +P SI     LV L++ +   L+ L    ++   LR L LS  + ++
Sbjct: 726 LD--ISDNTELEDMPASIASWCHLVYLDMSHNEKLQGLTQLPTS---LRHLNLS-YTDIE 779

Query: 606 KFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSL 664
             P+ ++++  L EL L G T +  +P   +L   ++ L   DC++L  + S +    + 
Sbjct: 780 SIPDCIKALHQLEELCLSGCTRLASLP---DLPCSIKALEAEDCESLESVSSPLYTPSA- 835

Query: 665 KTLNLSGCFKL 675
             L+ + CFKL
Sbjct: 836 -RLSFTNCFKL 845



 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 166/354 (46%), Gaps = 45/354 (12%)

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
           PE VE    L  LH      + LP +  L   LV LN++    +E L     +LK L+ +
Sbjct: 578 PEKVEFPPRLRLLHWAAYPSKSLPPTFNL-ECLVELNMRESL-VEKLWEGTQHLKNLKYM 635

Query: 597 KLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
            L+    LK+ P++  +  +L   +LD   S+ E+PSS   L KLE L +++C NL  +P
Sbjct: 636 DLTESKNLKELPDLSNAT-NLEYFYLDNCESLVEIPSSFAHLHKLEWLEMNNCINLQVIP 694

Query: 656 SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRK 715
           + +  L S+K +N+ GC +L   P     IE+L   DIS               +  M  
Sbjct: 695 AHM-NLTSVKQVNMKGCSRLRKFPVISRHIEAL---DISDNT-----------ELEDMPA 739

Query: 716 SVALKLPSLSGLCSLRKLNLTDCNLMEG--ALPSDIGNLCSLKELYLSKNSFVSLPTSIT 773
           S+A         C L  L+++    ++G   LP+      SL+ L LS     S+P  I 
Sbjct: 740 SIA-------SWCHLVYLDMSHNEKLQGLTQLPT------SLRHLNLSYTDIESIPDCIK 786

Query: 774 HLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSL 833
            L +L  + L  C RL SLP LP +I+ +    C SL ++   L    + S  ++  +  
Sbjct: 787 ALHQLEELCLSGCTRLASLPDLPCSIKALEAEDCESLESVSSPL---YTPSARLSFTNCF 843

Query: 834 KLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRP 887
           KL G    A  ++R   ++        SV++PG E+P  F ++ +G+S+++  P
Sbjct: 844 KLGGEAREA--IIRRSSDSTG------SVLLPGREVPAEFDHRAQGNSLSILLP 889


>gi|110741602|dbj|BAE98749.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 964

 Score =  302 bits (773), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 225/674 (33%), Positives = 349/674 (51%), Gaps = 62/674 (9%)

Query: 21  MIGICGMGGLGKTTIARVVYDLISHEFEASGFLD----NVREISSKGGLVSLQRQLLSQL 76
           +IGI G  G+GK+TIAR +   +S  F+ + F+D        +   G  + LQ QLL+++
Sbjct: 48  IIGISGPAGIGKSTIARALESRLSDRFQLTCFMDLRGSENNGLHDYGQQLRLQEQLLAKV 107

Query: 77  LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITS 136
           L      I +    + +L  RL   +VL+++DDV D+KQL++LA    WFG GSRII+T+
Sbjct: 108 LNQDGTRICH----LGVLQQRLSDLRVLIILDDVSDIKQLKALAKETTWFGPGSRIIVTT 163

Query: 137 RDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLA 196
            ++ LL+  G+D  Y     + +EAL++F   AF+   P     +L+ARI    G LPL 
Sbjct: 164 ENKDLLQQRGIDSTYHVGFPSREEALEIFCKFAFEQSSPPHAFEKLAARITHLCGNLPLG 223

Query: 197 LEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGN 256
           L V+GS L G+  DEW   + RLE  P  EI D+L++ ++ L E ++ +FL IA FF   
Sbjct: 224 LCVMGSSLFGKKQDEWEFVVHRLETNPGQEIDDVLRVGYERLHENDQMLFLHIAIFFNYR 283

Query: 257 DRDYVTNFLEGCGFHPVIG-IRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPEEL 314
           DRD V   L   G   V   ++ LI K LI ++    + MH LLQ++G+Q ++RQ P   
Sbjct: 284 DRDLVEAMLADDGNLDVGNWLKFLINKSLIEIYRTGQIVMHKLLQQVGRQAIRRQKP--- 340

Query: 315 GKRSRLWKEEEVCHVLTESTGTEL-VEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI 373
            KR  L    E+C +L    GT   V GI  D     +EV +C    AF ++ +LR L +
Sbjct: 341 WKRQILINANEICDLLRYEKGTSCNVSGISFDT-SGISEVTICDG--AFKRLHDLRFLHV 397

Query: 374 CN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELW 425
                     + +P  +E+   RLRLL W  YP K LP    ++  +E+ M  S + +LW
Sbjct: 398 YKSRDDGNNRVHIPEKVEF-PPRLRLLHWAAYPSKSLPPTFNLECLVELNMRESLVEKLW 456

Query: 426 KGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILN 485
           +G +HL  LK M L+ S+NL  +PD + A NLE   L+ C  L EI  S    +KL  L 
Sbjct: 457 EGTQHLKNLKYMDLTESKNLKELPDLSNATNLEYFYLDNCESLVEIPSSFAHLHKLEWLE 516

Query: 486 MKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEH 545
           M +C +L  +P  + + S++++N+K                  G  + R+FP I  H+E 
Sbjct: 517 MNNCINLQVIPAHMNLTSVKQVNMK------------------GCSRLRKFPVISRHIEA 558

Query: 546 LSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
           L     + T +  +P SI     LV L++ +   L+ L    ++   LR L LS  + ++
Sbjct: 559 LD--ISDNTELEDMPASIASWCHLVYLDMSHNEKLQGLTQLPTS---LRHLNLS-YTDIE 612

Query: 606 KFPEIVRSMKDLSELFLDG----TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
             P+ ++++  L EL L G     S+ ++P SI+ L         DC++L  + S +   
Sbjct: 613 SIPDCIKALHQLEELCLSGCTRLASLPDLPCSIKALEA------EDCESLESVSSPLYTP 666

Query: 662 KSLKTLNLSGCFKL 675
            +   L+ + CFKL
Sbjct: 667 SA--RLSFTNCFKL 678



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 166/354 (46%), Gaps = 45/354 (12%)

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
           PE VE    L  LH      + LP +  L   LV LN++    +E L     +LK L+ +
Sbjct: 411 PEKVEFPPRLRLLHWAAYPSKSLPPTFNL-ECLVELNMRESL-VEKLWEGTQHLKNLKYM 468

Query: 597 KLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
            L+    LK+ P++  +  +L   +LD   S+ E+PSS   L KLE L +++C NL  +P
Sbjct: 469 DLTESKNLKELPDLSNAT-NLEYFYLDNCESLVEIPSSFAHLHKLEWLEMNNCINLQVIP 527

Query: 656 SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRK 715
           + +  L S+K +N+ GC +L   P     IE+L   DIS               +  M  
Sbjct: 528 AHM-NLTSVKQVNMKGCSRLRKFPVISRHIEAL---DISDNT-----------ELEDMPA 572

Query: 716 SVALKLPSLSGLCSLRKLNLTDCNLMEG--ALPSDIGNLCSLKELYLSKNSFVSLPTSIT 773
           S+A         C L  L+++    ++G   LP+      SL+ L LS     S+P  I 
Sbjct: 573 SIA-------SWCHLVYLDMSHNEKLQGLTQLPT------SLRHLNLSYTDIESIPDCIK 619

Query: 774 HLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSL 833
            L +L  + L  C RL SLP LP +I+ +    C SL ++   L    + S  ++  +  
Sbjct: 620 ALHQLEELCLSGCTRLASLPDLPCSIKALEAEDCESLESVSSPL---YTPSARLSFTNCF 676

Query: 834 KLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRP 887
           KL G    A  ++R   ++        SV++PG E+P  F ++ +G+S+++  P
Sbjct: 677 KLGGEAREA--IIRRSSDSTG------SVLLPGREVPAEFDHRAQGNSLSILLP 722


>gi|145326642|ref|NP_001077768.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|145337141|ref|NP_176562.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196019|gb|AEE34140.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196020|gb|AEE34141.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 964

 Score =  302 bits (773), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 225/674 (33%), Positives = 349/674 (51%), Gaps = 62/674 (9%)

Query: 21  MIGICGMGGLGKTTIARVVYDLISHEFEASGFLD----NVREISSKGGLVSLQRQLLSQL 76
           +IGI G  G+GK+TIAR +   +S  F+ + F+D        +   G  + LQ QLL+++
Sbjct: 48  IIGISGPAGIGKSTIARALESRLSDRFQLTCFMDLRGSENNGLHDYGQQLRLQEQLLAKV 107

Query: 77  LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITS 136
           L      I +    + +L  RL   +VL+++DDV D+KQL++LA    WFG GSRII+T+
Sbjct: 108 LNQDGTRICH----LGVLQQRLSDLRVLIILDDVSDIKQLKALAKETTWFGPGSRIIVTT 163

Query: 137 RDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLA 196
            ++ LL+  G+D  Y     + +EAL++F   AF+   P     +L+ARI    G LPL 
Sbjct: 164 ENKDLLQQRGIDSTYHVGFPSREEALEIFCKFAFEQSSPPHAFEKLAARITHLCGNLPLG 223

Query: 197 LEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGN 256
           L V+GS L G+  DEW   + RLE  P  EI D+L++ ++ L E ++ +FL IA FF   
Sbjct: 224 LCVMGSSLFGKKQDEWEFVVHRLETNPGQEIDDVLRVGYERLHENDQMLFLHIAIFFNYR 283

Query: 257 DRDYVTNFLEGCGFHPVIG-IRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPEEL 314
           DRD V   L   G   V   ++ LI K LI ++    + MH LLQ++G+Q ++RQ P   
Sbjct: 284 DRDLVEAMLADDGNLDVGNWLKFLINKSLIEIYRTGQIVMHKLLQQVGRQAIRRQEP--- 340

Query: 315 GKRSRLWKEEEVCHVLTESTGTEL-VEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI 373
            KR  L    E+C +L    GT   V GI  D     +EV +C    AF ++ +LR L +
Sbjct: 341 WKRQILINANEICDLLRYEKGTSCNVSGISFDT-SGISEVTICDG--AFKRLHDLRFLHV 397

Query: 374 CN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELW 425
                     + +P  +E+   RLRLL W  YP K LP    ++  +E+ M  S + +LW
Sbjct: 398 YKSRDDGNNRVHIPEKVEF-PPRLRLLHWAAYPSKSLPPTFNLECLVELNMRESLVEKLW 456

Query: 426 KGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILN 485
           +G +HL  LK M L+ S+NL  +PD + A NLE   L+ C  L EI  S    +KL  L 
Sbjct: 457 EGTQHLKNLKYMDLTESKNLKELPDLSNATNLEYFYLDNCESLVEIPSSFAHLHKLEWLE 516

Query: 486 MKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEH 545
           M +C +L  +P  + + S++++N+K                  G  + R+FP I  H+E 
Sbjct: 517 MNNCINLQVIPAHMNLTSVKQVNMK------------------GCSRLRKFPVISRHIEA 558

Query: 546 LSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
           L     + T +  +P SI     LV L++ +   L+ L    ++   LR L LS  + ++
Sbjct: 559 LD--ISDNTELEDMPASIASWCHLVYLDMSHNEKLQGLTQLPTS---LRHLNLS-YTDIE 612

Query: 606 KFPEIVRSMKDLSELFLDG----TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
             P+ ++++  L EL L G     S+ ++P SI+ L         DC++L  + S +   
Sbjct: 613 SIPDCIKALHQLEELCLSGCTRLASLPDLPCSIKALEA------EDCESLESVSSPLYTP 666

Query: 662 KSLKTLNLSGCFKL 675
            +   L+ + CFKL
Sbjct: 667 SA--RLSFTNCFKL 678



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 166/354 (46%), Gaps = 45/354 (12%)

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
           PE VE    L  LH      + LP +  L   LV LN++    +E L     +LK L+ +
Sbjct: 411 PEKVEFPPRLRLLHWAAYPSKSLPPTFNL-ECLVELNMRESL-VEKLWEGTQHLKNLKYM 468

Query: 597 KLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
            L+    LK+ P++  +  +L   +LD   S+ E+PSS   L KLE L +++C NL  +P
Sbjct: 469 DLTESKNLKELPDLSNAT-NLEYFYLDNCESLVEIPSSFAHLHKLEWLEMNNCINLQVIP 527

Query: 656 SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRK 715
           + +  L S+K +N+ GC +L   P     IE+L   DIS               +  M  
Sbjct: 528 AHM-NLTSVKQVNMKGCSRLRKFPVISRHIEAL---DISDNT-----------ELEDMPA 572

Query: 716 SVALKLPSLSGLCSLRKLNLTDCNLMEG--ALPSDIGNLCSLKELYLSKNSFVSLPTSIT 773
           S+A         C L  L+++    ++G   LP+      SL+ L LS     S+P  I 
Sbjct: 573 SIA-------SWCHLVYLDMSHNEKLQGLTQLPT------SLRHLNLSYTDIESIPDCIK 619

Query: 774 HLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSL 833
            L +L  + L  C RL SLP LP +I+ +    C SL ++   L    + S  ++  +  
Sbjct: 620 ALHQLEELCLSGCTRLASLPDLPCSIKALEAEDCESLESVSSPL---YTPSARLSFTNCF 676

Query: 834 KLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRP 887
           KL G    A  ++R   ++        SV++PG E+P  F ++ +G+S+++  P
Sbjct: 677 KLGGEAREA--IIRRSSDSTG------SVLLPGREVPAEFDHRAQGNSLSILLP 722


>gi|297842029|ref|XP_002888896.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297334737|gb|EFH65155.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1169

 Score =  302 bits (773), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 290/931 (31%), Positives = 456/931 (48%), Gaps = 91/931 (9%)

Query: 1    MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            M    E+L  L+   S D VRMIGI GMGG+GKTTIA+ +Y+  S  F    F++NVR I
Sbjct: 197  MKVHMERLNPLLSIESEDEVRMIGIWGMGGIGKTTIAKCLYEKYSRRFAHYCFIENVR-I 255

Query: 60   SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            ++K GL  LQ++LLS +      ++W V  G   + S+L + K+ LV+DDV +V QL +L
Sbjct: 256  AAKNGLPYLQKKLLSNIRGKKQETLWCVEKGCSCIKSKL-KDKIFLVLDDVDNVDQLHAL 314

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ-PLQE 178
            A N  WFG GSRIIIT+RD  LL + GV  +Y    L+  +A+Q+F   AF+  Q P   
Sbjct: 315  AKNTGWFGPGSRIIITTRDFGLLYSFGVRLLYHVSFLDIGDAIQVFKQVAFEGGQAPSDV 374

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRS-VDEWRSTLERLEIEPPSEILDILQISFDG 237
              Q S R  R A GLP ALE  G++L   + ++ W   L  LE  P   I+DIL+ S+DG
Sbjct: 375  YQQFSIRASRLAQGLPSALEAFGTYLRRITWIEGWEKALGILETVPHQSIMDILKTSYDG 434

Query: 238  LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHD 296
            L E E+  FL +AC F G     V   ++       I  + L  K LI +  +  + MH 
Sbjct: 435  LDEQEQAAFLHVACLFNGTSVQRVNALIDDGD----IRTKALEAKSLIEISPDGCITMHV 490

Query: 297  LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
            L+++  ++IV+++S     ++  LWK + +  VL  +TGT   EG+ L  +  E    L 
Sbjct: 491  LIEQAAREIVRQESGSMPWRQRILWKTDPIIFVLQNNTGTTTTEGVAL--HMCEMLQALS 548

Query: 357  ASAKAFSKMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQM 408
                  + + NL+  K           L+   G + L N L+LL W  YP+  LP     
Sbjct: 549  IEGNVLNAINNLKFFKAFMHLNDKESKLKFLPGTDMLPNTLKLLHWDSYPMTTLPPGYYP 608

Query: 409  DKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
               +E+ + YS +  LW G   L +LK + ++ S+NL  +PD + A  L+ LI++GCTRL
Sbjct: 609  HCLVELNLRYSSLVHLWDGTLDLGQLKRLDVTGSKNLTEIPDLSRAALLKDLIMKGCTRL 668

Query: 469  YEIHPSLLLHNKLIILNMKDCTSL----ITLPGKILMKS----LEKLNLKSLPTTISGLK 520
             +   S+   + L  L++ +C  L    I +  KI+++       +  +  LP  +  L 
Sbjct: 669  KQTPESIGSLSCLRKLDLSNCDGLTNLQIHISEKIVLREPGLRRRRQIILRLPRAVKKLN 728

Query: 521  CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL 580
             L+ L + G +    + +I+ + EHLS +  +      + +  E L    + +  + +SL
Sbjct: 729  SLANLSIEGKINIGLW-DIMGNAEHLSFISEQQIPEEYMVIPKERLP--FISSFYDFKSL 785

Query: 581  EILPVTVSN----LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIEL 636
             I  V+ S      +C+             FP +V       EL L   +I+++P  I L
Sbjct: 786  SIKRVSYSADGVPFRCI---------SFSAFPCLV-------ELNLINLNIQKIPVDIGL 829

Query: 637  LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
            +  LE L+LS   +   LP+S   L  LK   LS C KL+  PE    +  L+ L +SG 
Sbjct: 830  MQSLEKLDLSG-NDFRSLPASTKNLSKLKYARLSNCIKLKTFPE----LTELQTLKLSGC 884

Query: 697  AVPHSTSWYSYIPINLMRKSVALKLPSL---SGLCSLRKLNLTDCNLMEGALPSDIGNLC 753
            +   S                 L+LP      G   L +L L +C  ++ AL   +    
Sbjct: 885  SNLESL----------------LELPCAVQDEGRFRLLELELDNCKNLQ-ALSEQLSRFT 927

Query: 754  SLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL 813
            +L  L LS + F ++P SI  LS L  + L +CK+L+S+ +LP +++ +  +GC S    
Sbjct: 928  NLIHLDLSSHDFDAIPESIKELSSLETMCLNNCKKLKSVEELPQSLKHLYAHGCDS---- 983

Query: 814  LDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWF 873
            L+ + L ++ S  I  LD     G +     +     +  S       + +PG+E+P  F
Sbjct: 984  LENVSLSRNHS--IKHLDLSHCFGLQQDEQLITLFLNDKCSQEVSQRFLCLPGNEVPRNF 1041

Query: 874  MYQNEGSS--ITVTRPSNLYNKKKLVGYAIC 902
              Q+ G+S  I++  P+       L+G+A C
Sbjct: 1042 DNQSHGTSTKISLFTPT-------LLGFAAC 1065


>gi|359493390|ref|XP_003634584.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1067

 Score =  301 bits (772), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 228/668 (34%), Positives = 340/668 (50%), Gaps = 78/668 (11%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-I 59
           MD   +K++ L+D+ S+ V M+GI G GG+GKTTIA+VVY+ +  +F+   FL+NVRE  
Sbjct: 201 MDENLKKVKLLIDAQSNKVSMVGIYGTGGIGKTTIAKVVYNDMLDQFKCHSFLENVREKY 260

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
             KG L+ LQ++LL  +L   +  + N+ +G   + S+   +KVL+V+DDV   +QL+ L
Sbjct: 261 EDKGDLLQLQKELLCDILMEKNLVLRNIDEGFKKIKSKRHSEKVLIVLDDVGCEEQLKFL 320

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           A N E F  GS II+T+R++  L  +     Y+   +   +A +LF   AFK   P++  
Sbjct: 321 APNSECFHPGSIIIVTTRNKRCLDVYDSYSSYEAKRMADKQAEELFCWNAFKQDHPIENF 380

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V LS RI+ YA GLPLAL VLGSFL  R +DEW STL+ L+  PP  I  +LQIS+DGL 
Sbjct: 381 VGLSNRILDYADGLPLALVVLGSFLFQRPMDEWESTLDELKTIPPENIQKVLQISYDGLS 440

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           +  KK+FL IACFFK  D    T  LE C  HP IG+RVL E+CLI++ +NT+ MHDLLQ
Sbjct: 441 DERKKLFLYIACFFKDEDEKMATRILESCKLHPAIGLRVLHERCLISIEDNTIRMHDLLQ 500

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G  IV    PE  GK SRL + +++  VL+++   + ++ I L    H  ++      
Sbjct: 501 EMGWAIVC-NDPERPGKWSRLCELQDIESVLSQNEPAKKLKVIDLSYSMHLVDI------ 553

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYS 419
            + S+ + L+     N      LE L                                  
Sbjct: 554 SSISRCSKLKGFPDINFGSLKALESLD--------------------------------- 580

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLE-----KLILEGCTRLYEIHP- 473
                + G ++L+ L V I + S   ++    T  P LE     KL ++ C   +   P 
Sbjct: 581 -----FSGCRNLESLPVSIYNVSS--LKTLGITNCPKLEEMLEMKLGVDPCP--WPFSPL 631

Query: 474 SLLLHNKLIILN--MKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDL 531
           +  + N  II +    DC S           SLE L+ +   +++  L      D+  D+
Sbjct: 632 TCHISNSAIIWDDHWHDCFS-----------SLEALDSQCPLSSLVELSVRKFYDMEEDI 680

Query: 532 KFREFPEIVEHMEHLSELHLEG--TAIRGLPLSIELLSGLVLLNLKNCRSLEI-LPVTVS 588
                P    H+  L  L L    T + G+   I  LS LV L+L  C+  E  +P  + 
Sbjct: 681 -----PIGSSHLTSLEILSLGNVPTVVEGILYDIFHLSSLVKLSLTKCKPTEEGIPRDIQ 735

Query: 589 NLKCLRSLKLSGCSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSD 647
           NL  L+ L L  C+ +K    + +  +  L EL+L       +P+ I  L+ L+ L+LS 
Sbjct: 736 NLSPLQQLSLHDCNLMKGTILDHICHLTSLEELYLGWNHFSSIPAGISRLSNLKALDLSH 795

Query: 648 CKNLVRLP 655
           CK L ++P
Sbjct: 796 CKKLQQIP 803



 Score =  129 bits (325), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 178/364 (48%), Gaps = 33/364 (9%)

Query: 554 TAIRGLP-LSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVR 612
           + ++G P ++   L  L  L+   CR+LE LPV++ N+  L++L ++ C KL++  E+  
Sbjct: 560 SKLKGFPDINFGSLKALESLDFSGCRNLESLPVSIYNVSSLKTLGITNCPKLEEMLEM-- 617

Query: 613 SMKDLSELFLDGTSIKEVPSSIELLTKLELLN--LSDCKNLVRLPSSIIALKSLKTLNLS 670
                 +L +D       P +  +     + +    DC + +    S   L SL  L++ 
Sbjct: 618 ------KLGVDPCPWPFSPLTCHISNSAIIWDDHWHDCFSSLEALDSQCPLSSLVELSVR 671

Query: 671 GCFKLE-NVPETLGQIESLEELDISGTAVPHSTSWYSYIPIN-LMRKSVALKLPSLSG-- 726
             + +E ++P     + SLE L +           Y    ++ L++ S+    P+  G  
Sbjct: 672 KFYDMEEDIPIGSSHLTSLEILSLGNVPTVVEGILYDIFHLSSLVKLSLTKCKPTEEGIP 731

Query: 727 -----LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNI 781
                L  L++L+L DCNLM+G +   I +L SL+ELYL  N F S+P  I+ LS L  +
Sbjct: 732 RDIQNLSPLQQLSLHDCNLMKGTILDHICHLTSLEELYLGWNHFSSIPAGISRLSNLKAL 791

Query: 782 ELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSL 841
           +L  CK+LQ +P+LP ++R +  + C   ++   +  L     +M+ C  S K+ G K  
Sbjct: 792 DLSHCKKLQQIPELPSSLRFLDAH-CPDRIS---SSPLLLPIHSMVNCFKS-KIEGRK-- 844

Query: 842 AFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAI 901
              ++  Y     N    + +V+P S I EW  Y+N G  +T+  P N Y    L G+A+
Sbjct: 845 ---VINRYSSFYGNG---IGIVIPSSGILEWITYRNMGRQVTIELPPNWYKNDDLWGFAL 898

Query: 902 CCVF 905
           CCV+
Sbjct: 899 CCVY 902


>gi|121544146|gb|ABM55687.1| TIR-NBS-LRR class disease resistance protein [(Populus tomentosa x
           P. bolleana) x P. tomentosa]
          Length = 678

 Score =  301 bits (772), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 176/433 (40%), Positives = 262/433 (60%), Gaps = 10/433 (2%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD   + L FL  + + DV + GI GM G+GKTTIA+VV++ + + FE S FL N+ E S
Sbjct: 232 MDLAHDILDFL-STATDDVCIAGIHGMPGIGKTTIAKVVFNQLYYRFEGSCFLSNINETS 290

Query: 61  SK-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            +  GL  LQ+QLL  +LK    +I  V  G  ++  R++RK+VL+V DDV   +QL +L
Sbjct: 291 KQFNGLALLQKQLLHDILKQDVANINCVDRGKVLIKERIRRKRVLVVADDVAHPEQLNAL 350

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G R W G GSR+IIT+RD  +L     D+ Y+   L   E+LQLF   A +  +P ++ 
Sbjct: 351 MGERSWLGRGSRVIITTRDSSVLLK--ADQTYQIEELKPYESLQLFRWHALRDTKPTEDY 408

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           ++LS   + Y GGLPLALEV+G+ LSG++ D W+  +E+L   P  +I   L+ SFD L 
Sbjct: 409 MELSKDAVDYCGGLPLALEVMGACLSGKNRDGWKCVIEKLRRIPHHDIQGKLRTSFDALD 468

Query: 240 ELE-KKIFLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVH-NNTLWMHD 296
             E +  FLDIACFF    ++YV   L   CG++P + +  L E+ LI V+    + MHD
Sbjct: 469 GEELRNAFLDIACFFIDRKKEYVAKVLGARCGYNPEVDLETLRERSLIKVNCFGKITMHD 528

Query: 297 LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
           L +++G+++V+  SP+E GKR+R+W +E+  +VL +  GT++VEG+ LD    E +    
Sbjct: 529 LFRDMGREVVRESSPKEPGKRTRIWNQEDAWNVLQQQKGTDVVEGLTLDVRASEAK---S 585

Query: 357 ASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
            SA++F+KM  L LL+I  + L    + LS  L  + W   PLK+LPS+  +D  + +  
Sbjct: 586 LSARSFAKMKCLNLLQINGVHLTGSFKLLSKELMWICWLQCPLKYLPSDFILDNLVVLDT 645

Query: 417 CYSRIGELWKGIK 429
            YS + ELWKG K
Sbjct: 646 QYSNLKELWKGEK 658


>gi|105923041|gb|ABF81452.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
          Length = 1309

 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 186/541 (34%), Positives = 298/541 (55%), Gaps = 53/541 (9%)

Query: 12   MDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQ 71
            +  GS D  +  + G+GG+GKT IA+ V++   H+FE   FL N R       +V LQRQ
Sbjct: 521  LQEGSHDAAIAILYGIGGVGKTIIAKSVFNQNIHKFEGKSFLSNFRS----KDIVCLQRQ 576

Query: 72   LLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSR 131
            LLS +LK   + I +  +GI  +   L  +K L+V+DDV    Q   + G + W   GS+
Sbjct: 577  LLSDILKKTIDEINDEDEGILKIKDALCCRKTLIVLDDVDKRDQFNKIIGMQNWLCKGSK 636

Query: 132  IIITSRDEHLLKTHGVDEV-YKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYA 190
            II+T+R++ L   + ++ V +K   L+ +++L+LF+  AF    P+   V+ S RI+ + 
Sbjct: 637  IIVTTRNKGLFSANDIERVEFKVEPLDNEKSLELFSWNAFGQADPVDGFVEDSWRIVHHC 696

Query: 191  GGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ-ELEKKIFLDI 249
             GLPLAL V+GS LSG+  + W S L+++E+    E+  +L+IS+D L  +  K +FLDI
Sbjct: 697  NGLPLALRVIGSLLSGKGREIWESALQQMEVILNFEVQKVLRISYDFLDGDYPKNLFLDI 756

Query: 250  ACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT-LWMHDLLQELGQQIVQR 308
            ACFF G D D     L+G       GI  LI++CL+ ++N+  LWMH L++++G++I ++
Sbjct: 757  ACFFNGMDVDDAVRILDGLDKGARFGIDNLIDRCLVEINNDQRLWMHQLVRDMGREIARQ 816

Query: 309  QSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD----------------------- 345
            +S     K  R+W+ E+   VL  +T  E + G+ LD                       
Sbjct: 817  EST----KCQRIWRHEDAFTVLKGTTDVEKLRGLTLDMHALMEDNFAEVVCTDSMVRRKR 872

Query: 346  ---NYHH---------------ENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSN 387
               N+                 +  ++   S  AF KM ++R L++   +     E++  
Sbjct: 873  RRLNFFQLWLSDFSDGGKLQTGQTSLFPILSTDAFRKMPDVRFLQLNYTKFYGSFEHIPK 932

Query: 388  RLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIR 447
             L  L W G+ L+ +P+++ ++K + + +  S + + WKG   L KLK++ L HS NLIR
Sbjct: 933  NLIWLCWHGFSLRSIPNHVCLEKLVVLDLSKSCLVDAWKGKPFLPKLKILDLRHSLNLIR 992

Query: 448  MPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI-LMKSLEK 506
             PDF G P LEKLILE C RL +IH S+    +L+ LN+++CTSL+ LP ++  + SLE+
Sbjct: 993  TPDFLGLPALEKLILEDCIRLVQIHESIGDLQRLLFLNLRNCTSLVELPEEMGRLNSLEE 1052

Query: 507  L 507
            L
Sbjct: 1053 L 1053



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 35/59 (59%)

Query: 637  LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
            L  LE L L DC  LV++  SI  L+ L  LNL  C  L  +PE +G++ SLEEL + G
Sbjct: 999  LPALEKLILEDCIRLVQIHESIGDLQRLLFLNLRNCTSLVELPEEMGRLNSLEELVVDG 1057


>gi|297815270|ref|XP_002875518.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321356|gb|EFH51777.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1080

 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 247/743 (33%), Positives = 374/743 (50%), Gaps = 98/743 (13%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M++  +K+  L+   S +VRMIGI G  G+GKT IARV+++  +  FE S F++N++E+ 
Sbjct: 230 MEAHMKKMEQLLCLDSDEVRMIGIWGPSGIGKTIIARVLFNQFNGSFELSVFVENIKELM 289

Query: 61  SK-------GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDV 113
            +          + +QRQ +SQ+    +  I ++    DML      KKVL+V+D++   
Sbjct: 290 CRPLCSDDYSTKLHIQRQFMSQITNHKEMEICHLGVVQDML----HDKKVLVVLDNIDQS 345

Query: 114 KQLQSLAGNREWFGSGSRIIITSRDEHLLKTHG-VDEVYKPHGLNYDEALQLFNMKAFKT 172
            QL ++A    WFG GSRIIIT+ D+ LLK H  ++ +YK    +  EA Q+F M AF  
Sbjct: 346 IQLDAIAKETCWFGQGSRIIITTHDQKLLKAHDDINHIYKVGFPSASEACQIFCMYAFGQ 405

Query: 173 YQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQ 232
             P      L+ ++ +  GGLPL L V+GS   G S +EW + L RL+    S I  IL+
Sbjct: 406 KFPKDGFEDLAWQVTKLLGGLPLGLRVMGSHFRGMSKEEWINALPRLKTRLDSSIQSILK 465

Query: 233 ISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTL 292
            S+D L + +K +FL IAC F       V   L         G+ VL EKCLI++    +
Sbjct: 466 FSYDALWDEDKDLFLHIACLFNNKRTSKVEEHLAHKFLDVRQGLYVLAEKCLISIDTEWI 525

Query: 293 WMHDLLQELGQQIVQ----RQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYH 348
            MH+LL++LG++IV+     QS  + GKR  L    ++C VLT+ TG+  V GI  D   
Sbjct: 526 KMHNLLEQLGKEIVRHEPGHQSICDPGKRQLLVDARDICEVLTDDTGSSSVIGIHFDPSE 585

Query: 349 HENEVYLCASAKAFSKMTNLRLLKI-CN-------LQLPNGLEYLSNRLRLLGWRGYPLK 400
              E+ +  S  AF  M+NL+ L+  C        L LP GL  LS +L  +G       
Sbjct: 586 LLGELNI--SEGAFEGMSNLKFLRFKCTYGDQSDKLYLPKGLSLLSPKLTTMG------- 636

Query: 401 FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
                L  D        Y          + L+ LK M+LS+S+NL  +P+ + A  L++L
Sbjct: 637 -----LFSDVMFAFQFLY----------EPLENLKWMVLSYSKNLKELPNLSTATKLQEL 681

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLK 520
            L  CT L E+  S+     L  L++ +C S++                  LP+      
Sbjct: 682 FLIDCTSLVELPSSIGNAISLQTLHLGECKSIV-----------------ELPSCFGNAI 724

Query: 521 CLSTLDVSGDLKFREFPEIVEHMEHLSELHLE-GTAIRGLPLSIELLSGLVLLNLKNCRS 579
            LS L++SG     E P  + +  +L  LH++  T +  LP SI  L  L    LK C  
Sbjct: 725 NLSWLNLSGCSSLVELPSSIGNATNLEILHMDMCTDVVKLPSSIGNLYKLREFTLKGCLK 784

Query: 580 LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTK 639
           LEILP  + NL+ L  L L+ C  LK+FPEI  ++K    L+L+GT+++EVPSSI+  ++
Sbjct: 785 LEILPTNI-NLESLDELNLTDCLLLKRFPEISTNIK---HLYLNGTAVEEVPSSIKSWSR 840

Query: 640 LELLNLSDCKNLVRLPSS--------------------IIALKSLKTLNLSGCFKLENVP 679
           L+ L++S  ++L + P +                    +  +  L+ L L+GC KL ++P
Sbjct: 841 LDDLHMSYSESLKKFPHALDIITTLYVNDLEMHEIPLWVTKISCLRGLKLNGCKKLVSLP 900

Query: 680 ETLGQI--------ESLEELDIS 694
           +    +        ESLE LD S
Sbjct: 901 QLPDSLSYLEAVNCESLERLDFS 923



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 166/381 (43%), Gaps = 55/381 (14%)

Query: 564  ELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL- 622
            E L  L  + L   ++L+ LP  +S    L+ L L  C+ L + P  + +   L  L L 
Sbjct: 650  EPLENLKWMVLSYSKNLKELP-NLSTATKLQELFLIDCTSLVELPSSIGNAISLQTLHLG 708

Query: 623  DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
            +  SI E+PS       L  LNLS C +LV LPSSI    +L+ L++  C  +  +P ++
Sbjct: 709  ECKSIVELPSCFGNAINLSWLNLSGCSSLVELPSSIGNATNLEILHMDMCTDVVKLPSSI 768

Query: 683  GQIESLEELDISG----TAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDC 738
            G +  L E  + G      +P + +  S   +NL    +  + P +S   +++ L L   
Sbjct: 769  GNLYKLREFTLKGCLKLEILPTNINLESLDELNLTDCLLLKRFPEIS--TNIKHLYLNGT 826

Query: 739  NLMEGALPSDIGNLCSLKELYLSKNSFVS---------------------LPTSITHLSK 777
             + E  +PS I +   L +L++S +  +                      +P  +T +S 
Sbjct: 827  AVEE--VPSSIKSWSRLDDLHMSYSESLKKFPHALDIITTLYVNDLEMHEIPLWVTKISC 884

Query: 778  LLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLG 837
            L  ++L  CK+L SLPQLP ++  +    C SL  L  +    K     + C        
Sbjct: 885  LRGLKLNGCKKLVSLPQLPDSLSYLEAVNCESLERLDFSFYNPKIYLNFVNC-------- 936

Query: 838  NKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQ-NEGSSITVT---RPSNLYNK 893
                 F + +E  E +  T    + V+PG E+P  F Y+ N G+S+ V    RP +  ++
Sbjct: 937  -----FKLNKEARELIIQTSTDYA-VLPGGEVPAKFTYRANRGNSMIVNLNHRPLSTTSR 990

Query: 894  KKLVGYAICCVFHVLKNSRGN 914
             K       C+  V K  + N
Sbjct: 991  FK------ACILLVNKGDKEN 1005


>gi|15235928|ref|NP_193425.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|5302805|emb|CAB46046.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268443|emb|CAB80963.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|332658423|gb|AEE83823.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1304

 Score =  301 bits (770), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 267/857 (31%), Positives = 417/857 (48%), Gaps = 129/857 (15%)

Query: 21  MIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS--KGGLVSLQRQLLSQLLK 78
           M+GI G  G+GK+TI R ++  +S +F    F+       S   G  +S Q++LLS++L 
Sbjct: 205 MVGIWGQSGIGKSTIGRALFSQLSSQFPLRAFVTYKSTSGSDVSGMKLSWQKELLSEILG 264

Query: 79  LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
             D  I    D   ++  RL+ KKVL+++DDV +++ L++L G  EWFGSGSRII+ ++D
Sbjct: 265 QKDIKI----DHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGSRIIVITQD 320

Query: 139 EHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALE 198
             LLK H +D VY+    +   ALQ+ +  AF    P  +   L+  +   AG LPL L 
Sbjct: 321 RQLLKAHEIDLVYEVKLPSQGLALQMISQYAFGKDSPPDDFKALAFEVAELAGSLPLGLS 380

Query: 199 VLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDR 258
           VLGS L GR  DEW   + RL  +   +I + L++ +D L +  +++F  IACFF G   
Sbjct: 381 VLGSSLKGRDKDEWVKMMPRLRNDSDDKIEETLRVCYDRLNKKNRELFKCIACFFNGFKV 440

Query: 259 DYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPEELGKR 317
             V   LE       +G+ +L+EK LI +  +  + MH+LL++LG++I + +S    GKR
Sbjct: 441 SNVKELLED-----DVGLTMLVEKSLIRITPDGDIEMHNLLEKLGREIDRAKSKGNPGKR 495

Query: 318 SRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI---C 374
             L   E++  VL E TGTE++ GI L +  +          K F  M NL+ L+I    
Sbjct: 496 QFLTNFEDIQEVLAEKTGTEILLGIRLPHPGYLTTRSFLIDEKLFKGMRNLQYLEIGYWS 555

Query: 375 NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKL 434
           +  LP  L YL  +LRLL W   PLK LPS  + +  +++ M  S++ +LW+G   L  L
Sbjct: 556 DGDLPQSLVYLPLKLRLLEWVYCPLKSLPSTFRAEYLVKLIMKNSKLEKLWEGTLPLGSL 615

Query: 435 KVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLIT 494
           K M L +S+    +PD + A NLE+                        LN+ +C SL+T
Sbjct: 616 KKMNLWYSKYFKEIPDLSLAINLEE------------------------LNLSECESLVT 651

Query: 495 LPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG----DLKFREFPEIVEHMEHLSELH 550
                            LP++I     L TL  SG    DLK       +E M +L  L 
Sbjct: 652 -----------------LPSSIQNAIKLRTLYCSGVLLIDLKS------LEGMCNLEYLS 688

Query: 551 LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS-GCSKLKKFPE 609
           ++ + + G    +   S L LL   NC     L    SN K    +KL    S L+K  +
Sbjct: 689 VDCSRMEGTQGIVYFPSKLRLLLWNNCP----LKRLHSNFKVEYLVKLRMENSDLEKLWD 744

Query: 610 IVRSMKDLSELFLDGTS-IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
             + +  L ++FL G+  +KE+P  + L   LE +++  C++LV  PSS+     L  L+
Sbjct: 745 GTQPLGRLKQMFLRGSKYLKEIP-DLSLAINLEEVDICKCESLVTFPSSMQNAIKLIYLD 803

Query: 669 LSGCFKLENVPETLGQIESLEELDISGTA------------------------VPHSTSW 704
           +S C KLE+ P  L  +ESLE L+++G                          V     W
Sbjct: 804 ISDCKKLESFPTDL-NLESLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVVEDCFW 862

Query: 705 YSYIPINLMRKSVALK-LP-----------------------SLSGLCSLRKLNLTDC-N 739
              +P  L      ++ +P                        +  L SL +++L++  N
Sbjct: 863 NKNLPAGLDYLDCLMRCMPCEFRPEYLVFLNVRCYKHEKLWEGIQSLGSLEEMDLSESEN 922

Query: 740 LMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP-- 796
           L E  +P D+    +LK LYL+   S V+LP++I +L KL+ +E+++C  L+ LP     
Sbjct: 923 LTE--IP-DLSKATNLKHLYLNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDVNL 979

Query: 797 PNIRQVRVNGCASLVTL 813
            ++  + ++GC+SL T 
Sbjct: 980 SSLETLDLSGCSSLRTF 996



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 215/457 (47%), Gaps = 56/457 (12%)

Query: 360  KAFSKMTNLRLLKI--CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
            K+   M NL  L +    ++   G+ Y  ++LRLL W   PLK L SN +++  +++ M 
Sbjct: 676  KSLEGMCNLEYLSVDCSRMEGTQGIVYFPSKLRLLLWNNCPLKRLHSNFKVEYLVKLRME 735

Query: 418  YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
             S + +LW G + L +LK M L  S+ L  +PD + A NLE++ +  C  L     S+  
Sbjct: 736  NSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLEEVDICKCESLVTFPSSMQN 795

Query: 478  HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
              KLI L++ DC  L + P  + ++SLE LNL   P                    R FP
Sbjct: 796  AIKLIYLDISDCKKLESFPTDLNLESLEYLNLTGCPN------------------LRNFP 837

Query: 538  EI------VEHMEHLSELHLEGTAI-RGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
             I      V+  E  +E+ +E     + LP  ++ L  L+      C   E  P  +  L
Sbjct: 838  AIKMGCSDVDFPEGRNEIVVEDCFWNKNLPAGLDYLDCLM-----RCMPCEFRPEYLVFL 892

Query: 591  KCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCK 649
                      C K +K  E ++S+  L E+ L +  ++ E+P  +   T L+ L L++CK
Sbjct: 893  NV-------RCYKHEKLWEGIQSLGSLEEMDLSESENLTEIPD-LSKATNLKHLYLNNCK 944

Query: 650  NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA-------VPHST 702
            +LV LPS+I  L+ L  L +  C  LE +P  +  + SLE LD+SG +       +  S 
Sbjct: 945  SLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDV-NLSSLETLDLSGCSSLRTFPLISKSI 1003

Query: 703  SWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK 762
             W        +  +   ++  LS    L  L L +C  +   LPS IGNL +L+ LY+ +
Sbjct: 1004 KWL------YLENTAIEEILDLSKATKLESLILNNCKSLV-TLPSTIGNLQNLRRLYMKR 1056

Query: 763  NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
             + + +  +  +LS L  ++L  C  L++ P +  NI
Sbjct: 1057 CTGLEVLPTDVNLSSLGILDLSGCSSLRTFPLISTNI 1093



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/349 (32%), Positives = 159/349 (45%), Gaps = 67/349 (19%)

Query: 375  NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKL 434
            N  LP GL+YL   +R +     P +F P  L          CY    +LW+GI+ L  L
Sbjct: 863  NKNLPAGLDYLDCLMRCM-----PCEFRPEYLVFLNV----RCYKH-EKLWEGIQSLGSL 912

Query: 435  KVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLIT 494
            + M LS SENL  +PD + A NL+ L L  C  L  +  ++    KL+ L MK+CT L  
Sbjct: 913  EEMDLSESENLTEIPDLSKATNLKHLYLNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEV 972

Query: 495  LPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT 554
            LP  + + SLE                  TLD+SG    R FP I + ++ L   +LE T
Sbjct: 973  LPTDVNLSSLE------------------TLDLSGCSSLRTFPLISKSIKWL---YLENT 1011

Query: 555  AIR-----------------------GLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
            AI                         LP +I  L  L  L +K C  LE+LP  V NL 
Sbjct: 1012 AIEEILDLSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDV-NLS 1070

Query: 592  CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
             L  L LSGCS L+ FP I     ++  L+L+ T+I EVP  IE  T+L +L +  C+ L
Sbjct: 1071 SLGILDLSGCSSLRTFPLIS---TNIVWLYLENTAIGEVPCCIEDFTRLRVLLMYCCQRL 1127

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
              +  +I  L+SL   + + C          G I++L +  +  T   H
Sbjct: 1128 KNISPNIFRLRSLMFADFTDC---------RGVIKALSDATVVATMEDH 1167


>gi|297789019|ref|XP_002862524.1| hypothetical protein ARALYDRAFT_333306 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297308097|gb|EFH38782.1| hypothetical protein ARALYDRAFT_333306 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1091

 Score =  300 bits (769), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 246/727 (33%), Positives = 370/727 (50%), Gaps = 89/727 (12%)

Query: 12  MDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQ 71
           +D   +  R +GI GM G+GKT +A  ++  +  +   + FL  VRE ++   L  L+++
Sbjct: 202 LDCNENKTRYVGIVGMAGIGKTYLADKLFQKLKTKIGCNVFLKLVREKTTDEDLY-LEKR 260

Query: 72  LLSQLLKLADNSIWNVFDGIDMLGSR---LQRKKVLLVIDDVVDVKQLQSLAGNREWFGS 128
           L+  LL    N     F   + L  R   L +KKV++V+D+V D K+++   G   W   
Sbjct: 261 LVEGLLNKTIN-----FSSKNPLEERKNDLIQKKVVVVLDNVSDQKEIEPFLGICNWIKE 315

Query: 129 GSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKA--FKTYQPLQECVQLSARI 186
           GS I+IT+RD+ LLK    D +Y+   +N  E+L+LF  +A    +    +  ++LS + 
Sbjct: 316 GSIIVITTRDKSLLKGMNCD-IYEVPKMNDRESLELFKDRAQVCSSTNFEENFMELSKKF 374

Query: 187 IRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIF 246
           + YAGG PLAL+ +G  L  +  D W   L  L      ++ + L+ S+D L E +K +F
Sbjct: 375 VDYAGGNPLALKNIGKELYAKEKDHWEERLRTLTQCSNPKVREKLRSSYDELNEQQKDVF 434

Query: 247 LDIACFFKGNDRDYVTNFLEGCGFHPVIG------IRVLIEKCLITVHNNTLWMHDLLQE 300
           LDIA FF+  D  YVT+ L+   F P         I+ L++K LI+V +  + MH+LL  
Sbjct: 435 LDIAHFFRSEDVKYVTSLLDS--FDPGSAEAGKELIKGLVDKFLISVCDGRVEMHNLLLT 492

Query: 301 LGQQIVQRQSPEELGKRSRLWKE--EEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           + ++ V      +   +  LW    EE    L+   G + V GI++D  + E    +   
Sbjct: 493 MAKEHVG-----DTAGKYWLWSSNCEEFTSALSNIEGKDKVRGIIIDMSNVEE---MPLD 544

Query: 359 AKAFSKMTNLRLLKICN---------LQLPNGLEY-LSNRLRLLGWRGYPLKFLPSNLQM 408
            +AF  M++LR LK+C+         L LP+ LE+   N +R L W  +P K LPS+ + 
Sbjct: 545 NQAFVGMSSLRYLKVCDTGHSEAQCKLNLPDVLEFPKDNIVRYLNWVKFPGKELPSDFEP 604

Query: 409 DKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
              I++ + YS+I  +WK  K   +L+ + LSHS NL  +   + AP L +L LEGCT L
Sbjct: 605 TNLIDLRLPYSKITSVWKDAKVAPELRWVDLSHSSNLSSLLGLSEAPKLLRLNLEGCTSL 664

Query: 469 YEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVS 528
            E+   +    KL+ LN++ CTSL++LP         K+ + SL T I  L C S     
Sbjct: 665 KELPEEMQKMKKLVSLNLRGCTSLLSLP---------KITMDSLKTLI--LSCCS----- 708

Query: 529 GDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS 588
              KF+ F  I +H+E    L+L  TAI  LP +I  L GL+ L+LK+C++L  LP  + 
Sbjct: 709 ---KFQTFEVISKHLE---TLYLNNTAIDELPPTIGNLHGLIFLDLKDCKNLATLPDCLW 762

Query: 589 NLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSI-------------- 634
            +K L+ LKLSGCSKLK FP +  +M +L  L LDGTSI  +PS I              
Sbjct: 763 KMKSLQELKLSGCSKLKSFPNVKETMVNLRILLLDGTSIPLMPSKIFDSSFLRRLCLSRN 822

Query: 635 ----------ELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQ 684
                       L  L+ L L  CKNL  LP       +L  LN  GC  L  V   L  
Sbjct: 823 EEICSLLFDMSQLFHLKWLELKYCKNLTSLPK---LPPNLLCLNAHGCSSLRTVASPLAS 879

Query: 685 IESLEEL 691
           +   E++
Sbjct: 880 LMPTEQI 886



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 121/382 (31%), Positives = 184/382 (48%), Gaps = 66/382 (17%)

Query: 549 LHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILP-VTVSNLKCLRSLKLSGCSKLKK 606
           L+LEG T+++ LP  ++ +  LV LNL+ C SL  LP +T+ +LK   +L LS CSK + 
Sbjct: 656 LNLEGCTSLKELPEEMQKMKKLVSLNLRGCTSLLSLPKITMDSLK---TLILSCCSKFQT 712

Query: 607 FPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKT 666
           F  I    K L  L+L+ T+I E+P +I  L  L  L+L DCKNL  LP  +  +KSL+ 
Sbjct: 713 FEVI---SKHLETLYLNNTAIDELPPTIGNLHGLIFLDLKDCKNLATLPDCLWKMKSLQE 769

Query: 667 LNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSG 726
           L LSGC KL++ P     + +L  L + GT++P                           
Sbjct: 770 LKLSGCSKLKSFPNVKETMVNLRILLLDGTSIP--------------------------- 802

Query: 727 LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFV-SLPTSITHLSKLLNIELED 785
                             +PS I +   L+ L LS+N  + SL   ++ L  L  +EL+ 
Sbjct: 803 -----------------LMPSKIFDSSFLRRLCLSRNEEICSLLFDMSQLFHLKWLELKY 845

Query: 786 CKRLQSLPQLPPNIRQVRVNGCASLVTL---LDALKLCKSDSTMIACLDSLKLLG-NKSL 841
           CK L SLP+LPPN+  +  +GC+SL T+   L +L   +   +     D  KL   +KS 
Sbjct: 846 CKNLTSLPKLPPNLLCLNAHGCSSLRTVASPLASLMPTEQIHSTFILTDCHKLEQVSKSA 905

Query: 842 AFSMLREYLEAVSNTRQHLSVV--------VPGSEIPEWFMYQNEGSSITVTRPSNLYNK 893
             S +++  + +SN R     V         PG ++P WF +Q  GS + +  P +  N+
Sbjct: 906 IISYIQKKSQLMSNDRHSQDFVFKSLIGTCFPGCDVPVWFNHQALGSVLKLELPRD-GNE 964

Query: 894 KKLVGYAICCVFHVLKNSRGNN 915
            +L G  +C V    +    NN
Sbjct: 965 GRLSGIFLCVVVSFKEYKAQNN 986


>gi|15235932|ref|NP_193429.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|5302808|emb|CAB46049.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268447|emb|CAB80967.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|332658428|gb|AEE83828.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1041

 Score =  300 bits (769), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 245/766 (31%), Positives = 380/766 (49%), Gaps = 113/766 (14%)

Query: 7   KLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS--KGG 64
           KL+  ++S  + + M+GI G  G+GK+TI R ++  +S +F    F+       S   G 
Sbjct: 198 KLKLCLESKEARI-MVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGSDVSGM 256

Query: 65  LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNRE 124
            +S +++LLS++L   D  I    +   ++  RL+ KKVL+++DDV +++ L++L G  E
Sbjct: 257 KLSWEKELLSEILGQKDIKI----EHFGVVEQRLKHKKVLILLDDVDNLEFLRTLVGKAE 312

Query: 125 WFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSA 184
           WFGSGSRII+ ++D  LLK H +D +Y+    +   AL++    AF  Y P  +  +L+ 
Sbjct: 313 WFGSGSRIIVITQDRQLLKAHEIDLIYEVKLPSQGLALKMICQYAFGKYSPPDDFKELAF 372

Query: 185 RIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKK 244
            + + AG LPL L VLGS L  RS +EW   L  L+     +I+  L++S+  L   ++ 
Sbjct: 373 EVAKLAGNLPLGLSVLGSSLKRRSKEEWMEMLAELQNGLNRDIMKTLRVSYVRLDPKDQD 432

Query: 245 IFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQ 303
           IF  IA  F G     + +FL G G +  I ++ L +K LI +  N+T+ MH+LLQ+L  
Sbjct: 433 IFHYIAWLFNGWKVKSIKDFL-GDGVNVNIRLKTLDDKSLIRLTPNDTIEMHNLLQKLAT 491

Query: 304 QIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFS 363
           +I + +S    GKR  L   EE+  V T++T  E                       +F 
Sbjct: 492 EIDREESNGNPGKRRFLENAEEILDVFTDNTVNE----------------------NSFQ 529

Query: 364 KMTNLRLLKI----------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
            M NL+ LKI            ++LPNGL YL  +L+ L W   PLK LPSN + +  +E
Sbjct: 530 GMLNLQYLKIHDHSWWQPRETRMRLPNGLVYLPRKLKWLWWDNCPLKRLPSNFKAEYLVE 589

Query: 414 IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
           + M  S + +LW G + L  LK MIL +S+ L  +PD + A NLE+L +  C  L E  P
Sbjct: 590 LRMVNSDLEKLWNGTQLLGSLKKMILRNSKYLKEIPDLSYAMNLERLDISDCEVL-ESFP 648

Query: 474 SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNL--------KSLPTTISGLKCLS-- 523
           S L    L  L++  C  L   P  I+  S   +++        KSLP  +  L CL   
Sbjct: 649 SPLNSESLEYLDLLRCPKLRNFPETIMQISPYGIDIDVADCLWNKSLP-GLDYLDCLRRC 707

Query: 524 -----------TLDVSGDLKFREFPEIVEHMEHLSELHL-EGTAIRGLPLSIELLSGLVL 571
                       L + G+    +  E V+ +  L  + L E   +  +P  +   + LV 
Sbjct: 708 NPSKFLPEHLVNLKLRGNNMLEKLWEGVQSLGKLERMDLSECENLIEIP-DLSKATNLVN 766

Query: 572 LNLKNCRSLEILPVTVS-----------------------NLKCLRSLKLSGCSKLKKFP 608
           LNL NC+SL  LP T+                        NL  L ++ L GCS L+ FP
Sbjct: 767 LNLSNCKSLVTLPSTIGNHQKLYTLEMKECTGLKVLPMDVNLSSLHTVNLKGCSSLRFFP 826

Query: 609 EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP---SSIIALK--- 662
           +I +S+  L+   LD T+I+EVP   E  ++L +L++  CK+L R P   +SI  L    
Sbjct: 827 QISKSIAVLN---LDDTAIEEVP-CFENFSRLIVLSMRGCKSLRRFPQISTSIQELNLAD 882

Query: 663 --------------SLKTLNLSGCFKLENVPETLGQIESLEELDIS 694
                          LK LN+SGC KL+N+   + ++  L+++D +
Sbjct: 883 TAIEQVPCFIENFSKLKILNMSGCKKLKNISPNIFRLTWLKKVDFT 928



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/298 (33%), Positives = 149/298 (50%), Gaps = 59/298 (19%)

Query: 375 NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKL 434
           N  LP GL+YL + LR    R  P KFLP +L   K     M    + +LW+G++ L KL
Sbjct: 692 NKSLP-GLDYL-DCLR----RCNPSKFLPEHLVNLKLRGNNM----LEKLWEGVQSLGKL 741

Query: 435 KVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLIT 494
           + M LS  ENLI +PD + A NL  L L  C  L  +  ++  H KL  L MK+CT L  
Sbjct: 742 ERMDLSECENLIEIPDLSKATNLVNLNLSNCKSLVTLPSTIGNHQKLYTLEMKECTGLKV 801

Query: 495 LPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT 554
           LP  + + SL  +NLK          C S          R FP+I +    ++ L+L+ T
Sbjct: 802 LPMDVNLSSLHTVNLKG---------CSS---------LRFFPQISKS---IAVLNLDDT 840

Query: 555 AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
           AI  +P   E  S L++L+++ C+SL                        ++FP+I  S+
Sbjct: 841 AIEEVP-CFENFSRLIVLSMRGCKSL------------------------RRFPQISTSI 875

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC 672
           +   EL L  T+I++VP  IE  +KL++LN+S CK L  +  +I  L  LK ++ + C
Sbjct: 876 Q---ELNLADTAIEQVPCFIENFSKLKILNMSGCKKLKNISPNIFRLTWLKKVDFTDC 930



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 123/279 (44%), Gaps = 36/279 (12%)

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           E+L EL +  + +  L    +LL  L  + L+N + L+ +P  +S    L  L +S C  
Sbjct: 585 EYLVELRMVNSDLEKLWNGTQLLGSLKKMILRNSKYLKEIP-DLSYAMNLERLDISDCEV 643

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL-LNLSDC---KNLVRL----- 654
           L+ FP  + S        L    ++  P +I  ++   + ++++DC   K+L  L     
Sbjct: 644 LESFPSPLNSESLEYLDLLRCPKLRNFPETIMQISPYGIDIDVADCLWNKSLPGLDYLDC 703

Query: 655 -----PSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIP 709
                PS  +  + L  L L G   LE + E +  +  LE +D+S               
Sbjct: 704 LRRCNPSKFLP-EHLVNLKLRGNNMLEKLWEGVQSLGKLERMDLSECE------------ 750

Query: 710 INLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLP 769
            NL      +++P LS   +L  LNL++C  +   LPS IGN   L  L + + + + + 
Sbjct: 751 -NL------IEIPDLSKATNLVNLNLSNCKSLV-TLPSTIGNHQKLYTLEMKECTGLKVL 802

Query: 770 TSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCA 808
               +LS L  + L+ C  L+  PQ+  +I  + ++  A
Sbjct: 803 PMDVNLSSLHTVNLKGCSSLRFFPQISKSIAVLNLDDTA 841



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 116/262 (44%), Gaps = 42/262 (16%)

Query: 652 VRLPSSIIAL-KSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP---HSTSWYSY 707
           +RLP+ ++ L + LK L    C  L+ +P    + E L EL +  + +    + T     
Sbjct: 552 MRLPNGLVYLPRKLKWLWWDNC-PLKRLPSNF-KAEYLVELRMVNSDLEKLWNGTQLLGS 609

Query: 708 IPINLMRKSVALK-LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK-NSF 765
           +   ++R S  LK +P LS   +L +L+++DC ++E + PS + N  SL+ L L +    
Sbjct: 610 LKKMILRNSKYLKEIPDLSYAMNLERLDISDCEVLE-SFPSPL-NSESLEYLDLLRCPKL 667

Query: 766 VSLPTSITHLSKL-LNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDS 824
            + P +I  +S   ++I++ DC   +SLP L                  LD L+ C    
Sbjct: 668 RNFPETIMQISPYGIDIDVADCLWNKSLPGL----------------DYLDCLRRCNPSK 711

Query: 825 TMIACLDSLKLLGNKSLAFSMLREYLEAVSN----TRQHLSVVVPGSEIPEWFMYQN--- 877
            +   L +LKL GN     +ML +  E V +     R  LS      EIP+     N   
Sbjct: 712 FLPEHLVNLKLRGN-----NMLEKLWEGVQSLGKLERMDLSECENLIEIPDLSKATNLVN 766

Query: 878 ---EGSSITVTRPSNLYNKKKL 896
                    VT PS + N +KL
Sbjct: 767 LNLSNCKSLVTLPSTIGNHQKL 788


>gi|297791249|ref|XP_002863509.1| hypothetical protein ARALYDRAFT_916982 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309344|gb|EFH39768.1| hypothetical protein ARALYDRAFT_916982 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1133

 Score =  300 bits (768), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 247/772 (31%), Positives = 373/772 (48%), Gaps = 106/772 (13%)

Query: 2   DSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS 61
           + R ++L   +D   +   + GI GM G+GKTT+ + + +    +F    F+D +RE S 
Sbjct: 214 EQRLKELEEKLDIKDTRTLITGIVGMPGIGKTTMLKELIEKWKGKFSRHAFVDRIREKSY 273

Query: 62  KGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAG 121
              L  L   L  +LL   +N      D I     +L+++KVL+V+DDV + +Q+ +L G
Sbjct: 274 NSDLECLTISLFEKLLPELNNP---QVDSI--TKGQLRKRKVLVVLDDVSEREQIYALLG 328

Query: 122 ------NREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP 175
                   EW   GSRI I + D  LL+   V + Y    LN+ + + LF+  AF T Q 
Sbjct: 329 IYDLQNQHEWISDGSRIFIATNDMSLLEGL-VHDTYVVRQLNHKDGMDLFHHHAFGTNQA 387

Query: 176 LQEC-VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           + E  ++LS   + YA G PLAL++LG+ L  + +  W + L+ L  +P + I  ++Q+S
Sbjct: 388 IPEDRIKLSDEFVHYARGHPLALKILGTELCEKDMKHWETKLKILAQKPKTYIRQVVQVS 447

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
           ++ L   +K  FLDIACF +  D DYV + L          I+VL  K LI   +  + M
Sbjct: 448 YNELSSEQKDAFLDIACF-RSQDVDYVESLLVSSDPGSAEAIQVLKNKFLIDTCDGRVEM 506

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVC-----HVLTESTGTELVEGIVLDNYHH 349
           HDL+    +++  +       K+ RLW+ E++      ++L    G   V G+ LD    
Sbjct: 507 HDLVHTFSRKLDLKGG----SKQRRLWRHEDIVKERTVNLLQNRIGAANVRGVFLDLSEV 562

Query: 350 ENEVYLCASAKAFSKMTNLRLLKICN------------LQLPNGLEYLSNRLRLLGWRGY 397
           ++E+ L    +   KM NLR LK  N            + +P+ LE     +R   W  +
Sbjct: 563 QDEISL--DREHLKKMRNLRYLKFYNSHCHQECKTNAKINIPDELELPLKEVRCFHWLKF 620

Query: 398 PLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNL 457
           PLK +P++      +++ + +S+I  LW G+K    LK + L+HS  L  +   + APNL
Sbjct: 621 PLKEVPNDFNPINLVDLKLPFSKIERLWDGVKDTPVLKWVDLNHSSLLSSLSGLSKAPNL 680

Query: 458 EKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTIS 517
           + L LEGCT L                                 +SL  ++ KSL     
Sbjct: 681 QGLNLEGCTSL---------------------------------ESLGDVDSKSL----- 702

Query: 518 GLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNC 577
                 TL +SG   F+EFP I E++E    LHL+ TAI  LP +I  L  LVLL +K+C
Sbjct: 703 -----KTLTLSGCTSFKEFPLIPENLE---ALHLDRTAISQLPDNIVNLKKLVLLTMKDC 754

Query: 578 RSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELL 637
           + LE +P  V  L  L+ L LSGC KLK+FP I +S   L  LFLDGTSIK VP     L
Sbjct: 755 KMLENIPTEVDELTALQKLVLSGCLKLKEFPAINKS--PLKILFLDGTSIKTVPQ----L 808

Query: 638 TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA 697
             ++ L LS    +  LP+ I  L  L  L+L  C  L ++PE      +L  LD  G +
Sbjct: 809 PSVQYLYLSRNDEISYLPAGINQLFQLTWLDLKYCKSLTSIPEL---PPNLHYLDAHGCS 865

Query: 698 VPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDI 749
                       +  + K +A  LP++   CS    N T+C  +E A   +I
Sbjct: 866 -----------SLKTVAKPLARILPTVQNHCS---FNFTNCCKLEQAAKDEI 903



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 198/461 (42%), Gaps = 92/461 (19%)

Query: 572  LNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP 631
            LNL+ C SLE L    S  K L++L LSGC+  K+FP I    ++L  L LD T+I ++P
Sbjct: 683  LNLEGCTSLESLGDVDS--KSLKTLTLSGCTSFKEFPLIP---ENLEALHLDRTAISQLP 737

Query: 632  SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
             +I  L KL LL + DCK L  +P+ +  L +L+ L LSGC KL+  P            
Sbjct: 738  DNIVNLKKLVLLTMKDCKMLENIPTEVDELTALQKLVLSGCLKLKEFP------------ 785

Query: 692  DISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGN 751
                 A+  S       P+ ++                           ++G     +  
Sbjct: 786  -----AINKS-------PLKIL--------------------------FLDGTSIKTVPQ 807

Query: 752  LCSLKELYLSKNSFVS-LPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
            L S++ LYLS+N  +S LP  I  L +L  ++L+ CK L S+P+LPPN+  +  +GC+SL
Sbjct: 808  LPSVQYLYLSRNDEISYLPAGINQLFQLTWLDLKYCKSLTSIPELPPNLHYLDAHGCSSL 867

Query: 811  VTLLDALKL--------CKSDSTMI-----ACLDSLKLLGNKSLA-FSMLREYLEAVSNT 856
             T+   L          C  + T       A  D + L   +     S  R++     ++
Sbjct: 868  KTVAKPLARILPTVQNHCSFNFTNCCKLEQAAKDEITLYSQRKCQLLSYARKHYNGGLSS 927

Query: 857  RQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNC 916
                S   PG E+P WF ++  GS +    P + +++KKL G ++C V          + 
Sbjct: 928  EALFSTCFPGCEVPSWFCHEAVGSLLGRKLPPH-WHEKKLSGISLCAVVSFPAGQNQISS 986

Query: 917  FGSYPTHQL----------NCHIGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTC-YDIRL 965
            F    T  +           C +G        +DK     SDH+++ Y+   TC + IR 
Sbjct: 987  FSVTCTFNIKAEDKSWIPFTCPVGSWTRDGDKKDKI---ESDHVFIAYI---TCPHTIRC 1040

Query: 966  PLESNLEPFESNHVNVSFEPWLGQGL----EVKMCGLHPVY 1002
              + N         ++ F      G+    +V  CGL  VY
Sbjct: 1041 LEDENSNKCNFTEASLEFTVTGDTGVIGKFKVLRCGLSLVY 1081


>gi|17381122|gb|AAL36373.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 876

 Score =  299 bits (766), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 218/661 (32%), Positives = 339/661 (51%), Gaps = 67/661 (10%)

Query: 21  MIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLA 80
           MIGI G  G+GKTTIAR +++ +   F  S F+ N+ ++++    + L   LLS++L   
Sbjct: 1   MIGIWGPAGIGKTTIARALFNQLFTGFRHSCFMGNI-DVNNYDSKLRLHNMLLSKILNQK 59

Query: 81  DNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEH 140
           D  I +    +  +   L+ ++VL+V+DDV D++QL+ LA    WFG GSR+I+T +D+ 
Sbjct: 60  DMKIHH----LGAIEEWLRNQRVLIVLDDVDDLEQLEVLAKESFWFGPGSRVIVTLKDKK 115

Query: 141 LLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVL 200
           +L  HG++++Y     +  +AL++F + AFK   P     +L+ +++   G LPLAL V+
Sbjct: 116 ILMAHGINDIYHVDYPSQKKALEIFCLSAFKQSSPQDGFEELARKVVELCGNLPLALRVV 175

Query: 201 GSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDY 260
           GS   G S DEWR  L  +E     +I  +L++ +D L E  + +FL IACFF     DY
Sbjct: 176 GSSFYGESEDEWRLQLYGIETNLDRKIEHVLRVGYDKLLEKHQSLFLHIACFFNHESVDY 235

Query: 261 VTNFLEGCGFHPVIGIRVLIEKCLITVHNNTL-WMHDLLQELGQQIVQRQSPEELGKRSR 319
           V+  L         G++ L  K L+ +  + L  MH LLQ+LG+Q+V +QS E  GKR  
Sbjct: 236 VSTMLADSTLDVENGLKTLAAKSLVHISTHGLVRMHCLLQQLGRQVVVQQSGEP-GKRQF 294

Query: 320 LWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKIC--NLQ 377
           L + +E+  VL   TGT  + GI  D              + F  M NL+ LK    N+ 
Sbjct: 295 LVEAKEIRDVLANETGTGSIIGISFD---MSKIGEFSIRKRVFEGMHNLKFLKFYNGNVS 351

Query: 378 LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVM 437
           L   ++YL  RLRLL W  YP K LP   Q +  +E+Y+  S++ +LW GI+ L  LK +
Sbjct: 352 LLEDMKYLP-RLRLLHWDSYPRKRLPLTFQPECLVELYLVSSKLEKLWGGIQPLTNLKKI 410

Query: 438 ILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPG 497
            L +S NL  +P+ + A NLE L L GC  L EI  S+   +KL +L+   C+ L  +P 
Sbjct: 411 NLEYSSNLKEIPNLSKATNLETLRLTGCESLMEIPSSISNLHKLEVLDASGCSKLHVIPT 470

Query: 498 KILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIR 557
           KI                +S LK +   D S   + R FP+I  +++ LS   + GT I+
Sbjct: 471 KI---------------NLSSLKMVGMDDCS---RLRSFPDISTNIKILS---IRGTKIK 509

Query: 558 GLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDL 617
             P SI    G++L+  ++ + L  +P +VS L                         DL
Sbjct: 510 EFPASIVGGLGILLIGSRSLKRLTHVPESVSYL-------------------------DL 544

Query: 618 SELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLEN 677
           S      + IK +P  +  L  L+ L + +C+ LV +     +L+S+       C  LE+
Sbjct: 545 SH-----SDIKMIPDYVIGLPHLQHLTIGNCRKLVSIEGHSPSLESIVAYR---CISLES 596

Query: 678 V 678
           +
Sbjct: 597 M 597



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 154/352 (43%), Gaps = 52/352 (14%)

Query: 583 LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLTKLE 641
           LP+T    +CL  L L   SKL+K    ++ + +L ++ L+ +S +KE+P+ +   T LE
Sbjct: 375 LPLTFQP-ECLVELYLVS-SKLEKLWGGIQPLTNLKKINLEYSSNLKEIPN-LSKATNLE 431

Query: 642 LLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHS 701
            L L+ C++L+ +PSSI  L  L+ L+ SGC KL  +P  +    +L  L + G      
Sbjct: 432 TLRLTGCESLMEIPSSISNLHKLEVLDASGCSKLHVIPTKI----NLSSLKMVGMDDCSR 487

Query: 702 TSWYSYIPINL----MRKSVALKLPS---------LSGLCSLRKLNLTDCNLMEGALPSD 748
              +  I  N+    +R +   + P+         L G  SL++L           +P  
Sbjct: 488 LRSFPDISTNIKILSIRGTKIKEFPASIVGGLGILLIGSRSLKRLT---------HVPE- 537

Query: 749 IGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCA 808
                S+  L LS +    +P  +  L  L ++ + +C++L S+    P++  +    C 
Sbjct: 538 -----SVSYLDLSHSDIKMIPDYVIGLPHLQHLTIGNCRKLVSIEGHSPSLESIVAYRCI 592

Query: 809 SLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSE 868
           SL ++  +            CL     L N+S    +L            H  + + G+E
Sbjct: 593 SLESMCCSFHRPILKLEFYNCLK----LDNESKRRIILHS---------GHRIIFLTGNE 639

Query: 869 IPEWFMYQNEGSSITVT-RPSNLYNKKKLVGYAICCVFHVLKNSRGN--NCF 917
           +P  F +Q  G+SIT++  P    +      +  C V    KNS  +  NCF
Sbjct: 640 VPAQFTHQTRGNSITISLSPGGEESFSVSSRFRACLVLSPSKNSPYSDINCF 691



 Score = 46.2 bits (108), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 39/187 (20%)

Query: 540 VEHMEHLSELHLEGTA-IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKL 598
           ++ + +L +++LE ++ ++ +P ++   + L  L L  C SL  +P ++SNL  L  L  
Sbjct: 401 IQPLTNLKKINLEYSSNLKEIP-NLSKATNLETLRLTGCESLMEIPSSISNLHKLEVLDA 459

Query: 599 SGCSKLKKFPEIV----------------RSMKDLSE----LFLDGTSIKEVPSSIELLT 638
           SGCSKL   P  +                RS  D+S     L + GT IKE P+SI    
Sbjct: 460 SGCSKLHVIPTKINLSSLKMVGMDDCSRLRSFPDISTNIKILSIRGTKIKEFPASIVGGL 519

Query: 639 KLELLNLSDCKNLVRLPSS-----------------IIALKSLKTLNLSGCFKLENVPET 681
            + L+     K L  +P S                 +I L  L+ L +  C KL ++   
Sbjct: 520 GILLIGSRSLKRLTHVPESVSYLDLSHSDIKMIPDYVIGLPHLQHLTIGNCRKLVSIEGH 579

Query: 682 LGQIESL 688
              +ES+
Sbjct: 580 SPSLESI 586


>gi|147778859|emb|CAN73697.1| hypothetical protein VITISV_038484 [Vitis vinifera]
          Length = 784

 Score =  299 bits (766), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 206/523 (39%), Positives = 289/523 (55%), Gaps = 78/523 (14%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++S   +++ L+ + S DVRM+GI GMGG+GKTT+AR VY+ ISHZFEA  FL+NV +  
Sbjct: 188 IESSIREIKSLLFTESLDVRMVGIWGMGGIGKTTLARAVYNQISHZFEACCFLENVSDYL 247

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            K   +SLQ++ LSQLL+  + +I     G   + + L  KKVL+VIDDV + K L+ L 
Sbjct: 248 EKQDFLSLQKKFLSQLLEDENLNI----KGCISIKALLCSKKVLIVIDDVNNSKILEDLI 303

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G   WFG GSRIIIT+R++ LL THGV+EVY+   LN D A++LF+  AFK   P+ + V
Sbjct: 304 GKHGWFGIGSRIIITTRNKQLLVTHGVNEVYEVEKLNDDNAVELFSRYAFKKAHPIDDYV 363

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS  I+ YA GLPLAL+VL +                                      
Sbjct: 364 ELSQCIVVYAQGLPLALQVLDN-------------------------------------- 385

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            E+ IFLDIACFF+G+D+ YV      CGF P IGIRVLIEK LI+V  N L +H+LLQ+
Sbjct: 386 -ERDIFLDIACFFQGHDKXYVMEIFRSCGFFPDIGIRVLIEKSLISVVENKLMIHNLLQK 444

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +G++IV+  SP+E GK SRLW  ++V HVLT++TGT+ VEGI LD      E+    + +
Sbjct: 445 MGREIVREASPKEPGKXSRLWIHDDVNHVLTKNTGTKDVEGISLD-LSSLKEINF--TNE 501

Query: 361 AFSKMTNLRLLKIC-NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI----- 414
           AF+ M  LRLLK+  NL+  N L++               KFL   L   +   +     
Sbjct: 502 AFAPMNRLRLLKVLENLKFMN-LKH--------------SKFLTETLDFSRVTNLERLSS 546

Query: 415 ------YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMP-DFTGAPNLEKLILEGCTR 467
                   C    G     +  L  L+ + LS + N + +P +    P L+ L LE C R
Sbjct: 547 LKTLSLSACNISDGATLDSLGFLSSLEDLDLSEN-NFVTLPSNIXRLPXLKMLGLENCKR 605

Query: 468 LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK 510
           L  + P L    + I+   ++CTSL T+  +     L  + LK
Sbjct: 606 LQAL-PELPTSIRSIM--ARNCTSLETISNQSFGSLLMTVRLK 645



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 116/227 (51%), Gaps = 27/227 (11%)

Query: 738 CNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPP 797
           CN+ +GA    +G L SL++L LS+N+FV+LP++I  L  L  + LE+CKRLQ+LP+LP 
Sbjct: 555 CNISDGATLDSLGFLSSLEDLDLSENNFVTLPSNIXRLPXLKMLGLENCKRLQALPELPT 614

Query: 798 NIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTR 857
           +IR +    C SL T+        S+ +  + L +++L   + +   + R+ L   +   
Sbjct: 615 SIRSIMARNCTSLETI--------SNQSFGSLLMTVRL--KEHIYCPINRDGLLVPA--- 661

Query: 858 QHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCV------FHVLKNS 911
             LS V  GS IP+W  YQ+ G  +    P N +B    +G A+C V         L + 
Sbjct: 662 --LSAVXFGSRIPDWIRYQSSGXEVKAELPPNWFBSN-FLGLALCVVTVPRXGLVSLADF 718

Query: 912 RG---NNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLYL 955
            G    +C   Y T   +     G+Y      K G+  SDHLWL+Y+
Sbjct: 719 FGLFWRSCTLFYSTSN-HASSSLGVYTCPNHLK-GKVESDHLWLVYV 763


>gi|15810375|gb|AAL07075.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 695

 Score =  299 bits (766), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 218/661 (32%), Positives = 339/661 (51%), Gaps = 67/661 (10%)

Query: 21  MIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLA 80
           MIGI G  G+GKTTIAR +++ +   F  S F+ N+ ++++    + L   LLS++L   
Sbjct: 1   MIGIWGPAGIGKTTIARALFNQLFTGFRHSCFMGNI-DVNNYDSKLRLHNMLLSKILNQK 59

Query: 81  DNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEH 140
           D  I +    +  +   L+ ++VL+V+DDV D++QL+ LA    WFG GSR+I+T +D+ 
Sbjct: 60  DMKIHH----LGAIEEWLRNQRVLIVLDDVDDLEQLEVLAKESFWFGPGSRVIVTLKDKK 115

Query: 141 LLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVL 200
           +L  HG++++Y     +  +AL++F + AFK   P     +L+ +++   G LPLAL V+
Sbjct: 116 ILMAHGINDIYHVDYPSQKKALEIFCLSAFKQSSPQDGFEELARKVVELCGNLPLALRVV 175

Query: 201 GSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDY 260
           GS   G S DEWR  L  +E     +I  +L++ +D L E  + +FL IACFF     DY
Sbjct: 176 GSSFYGESEDEWRLQLYGIETNLDRKIEHVLRVGYDKLLEKHQSLFLHIACFFNHESVDY 235

Query: 261 VTNFLEGCGFHPVIGIRVLIEKCLITVHNNTL-WMHDLLQELGQQIVQRQSPEELGKRSR 319
           V+  L         G++ L  K L+ +  + L  MH LLQ+LG+Q+V +QS E  GKR  
Sbjct: 236 VSTMLADSTLDVENGLKTLAAKSLVHISTHGLVRMHCLLQQLGRQVVVQQSGEP-GKRQF 294

Query: 320 LWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKIC--NLQ 377
           L + +E+  VL   TGT  + GI  D              + F  M NL+ LK    N+ 
Sbjct: 295 LVEAKEIRDVLANETGTGSIIGISFD---MSKIGEFSIRKRVFEGMHNLKFLKFYNGNVS 351

Query: 378 LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVM 437
           L   ++YL  RLRLL W  YP K LP   Q +  +E+Y+  S++ +LW GI+ L  LK +
Sbjct: 352 LLEDMKYLP-RLRLLHWDSYPRKRLPLTFQPECLVELYLVSSKLEKLWGGIQPLTNLKKI 410

Query: 438 ILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPG 497
            L +S NL  +P+ + A NLE L L GC  L EI  S+   +KL +L+   C+ L  +P 
Sbjct: 411 NLEYSSNLKEIPNLSKATNLETLRLTGCESLMEIPSSISNLHKLEVLDASGCSKLHVIPT 470

Query: 498 KILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIR 557
           KI                +S LK +   D S   + R FP+I  +++ LS   + GT I+
Sbjct: 471 KI---------------NLSSLKMVGMDDCS---RLRSFPDISTNIKILS---IRGTKIK 509

Query: 558 GLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDL 617
             P SI    G++L+  ++ + L  +P +VS L                         DL
Sbjct: 510 EFPASIVGGLGILLIGSRSLKRLTHVPESVSYL-------------------------DL 544

Query: 618 SELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLEN 677
           S      + IK +P  +  L  L+ L + +C+ LV +     +L+S+       C  LE+
Sbjct: 545 SH-----SDIKMIPDYVIGLPHLQHLTIGNCRKLVSIEGHSPSLESIVAYR---CISLES 596

Query: 678 V 678
           +
Sbjct: 597 M 597



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 154/352 (43%), Gaps = 52/352 (14%)

Query: 583 LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLTKLE 641
           LP+T    +CL  L L   SKL+K    ++ + +L ++ L+ +S +KE+P+ +   T LE
Sbjct: 375 LPLTFQP-ECLVELYLVS-SKLEKLWGGIQPLTNLKKINLEYSSNLKEIPN-LSKATNLE 431

Query: 642 LLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHS 701
            L L+ C++L+ +PSSI  L  L+ L+ SGC KL  +P  +    +L  L + G      
Sbjct: 432 TLRLTGCESLMEIPSSISNLHKLEVLDASGCSKLHVIPTKI----NLSSLKMVGMDDCSR 487

Query: 702 TSWYSYIPINL----MRKSVALKLPS---------LSGLCSLRKLNLTDCNLMEGALPSD 748
              +  I  N+    +R +   + P+         L G  SL++L           +P  
Sbjct: 488 LRSFPDISTNIKILSIRGTKIKEFPASIVGGLGILLIGSRSLKRLT---------HVPE- 537

Query: 749 IGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCA 808
                S+  L LS +    +P  +  L  L ++ + +C++L S+    P++  +    C 
Sbjct: 538 -----SVSYLDLSHSDIKMIPDYVIGLPHLQHLTIGNCRKLVSIEGHSPSLESIVAYRCI 592

Query: 809 SLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSE 868
           SL ++  +            CL     L N+S    +L            H  + + G+E
Sbjct: 593 SLESMCCSFHRPILKLEFYNCLK----LDNESKRRIILHS---------GHRIIFLTGNE 639

Query: 869 IPEWFMYQNEGSSITVT-RPSNLYNKKKLVGYAICCVFHVLKNSRGN--NCF 917
           +P  F +Q  G+SIT++  P    +      +  C V    KNS  +  NCF
Sbjct: 640 VPAQFTHQTRGNSITISLSPGGEESFSVSSRFRACLVLSPSKNSPYSDINCF 691



 Score = 46.2 bits (108), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 39/187 (20%)

Query: 540 VEHMEHLSELHLEGTA-IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKL 598
           ++ + +L +++LE ++ ++ +P ++   + L  L L  C SL  +P ++SNL  L  L  
Sbjct: 401 IQPLTNLKKINLEYSSNLKEIP-NLSKATNLETLRLTGCESLMEIPSSISNLHKLEVLDA 459

Query: 599 SGCSKLKKFPEIV----------------RSMKDLSE----LFLDGTSIKEVPSSIELLT 638
           SGCSKL   P  +                RS  D+S     L + GT IKE P+SI    
Sbjct: 460 SGCSKLHVIPTKINLSSLKMVGMDDCSRLRSFPDISTNIKILSIRGTKIKEFPASIVGGL 519

Query: 639 KLELLNLSDCKNLVRLPSS-----------------IIALKSLKTLNLSGCFKLENVPET 681
            + L+     K L  +P S                 +I L  L+ L +  C KL ++   
Sbjct: 520 GILLIGSRSLKRLTHVPESVSYLDLSHSDIKMIPDYVIGLPHLQHLTIGNCRKLVSIEGH 579

Query: 682 LGQIESL 688
              +ES+
Sbjct: 580 SPSLESI 586


>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
 gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
          Length = 1996

 Score =  299 bits (765), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 229/695 (32%), Positives = 352/695 (50%), Gaps = 98/695 (14%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMI-GICGMGGLGKTTIARVVYDLISHEFEASGFLDNV--- 56
           +++  E++++L+D    D  MI GICG  G+GKTTIAR +Y L+   F+ S F++N+   
Sbjct: 147 LEAHLEEMKYLLDLDYKDGAMIVGICGPAGIGKTTIARALYSLLLSSFQLSCFVENLSGS 206

Query: 57  --REISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
             R +   G  + LQ QLLS++L      I++    +  +  RL  +KVL+V+DDV D+K
Sbjct: 207 DNRGLDEYGFKLRLQEQLLSKILNQNGMRIYH----LGAIQERLCDQKVLIVLDDVNDLK 262

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL++LA    WFG GSRII+T+ D+ LL+ HG+++ Y     + +EAL++F + AF+   
Sbjct: 263 QLEALANETSWFGPGSRIIVTTEDKGLLEQHGINKTYHVGFPSIEEALEIFCIYAFRKSS 322

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           P     +L+ R+      LPL L V+GS L G+  DEW + L+RLE      I   L++ 
Sbjct: 323 PPDGFKKLTKRVTNVFDNLPLGLRVMGSSLRGKGEDEWEALLDRLETSLDRNIEGALRVG 382

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLI-TVHNNTLW 293
           +D LQE E+ +FL IA FF  N  ++V   L         G+++L  K L+    +  + 
Sbjct: 383 YDSLQEEEQALFLHIAVFFNYNKDEHVIAMLADSNLDVKQGLKILTNKSLVYRSTSGKIV 442

Query: 294 MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
           MH LLQ++G++ +QRQ P    KR  L    E+C+VL   T T    GI LD     N+V
Sbjct: 443 MHKLLQQVGRKAIQRQEP---WKRHILIDAHEICYVLENDTDTRAALGISLDT-SGINKV 498

Query: 354 YLCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSN 405
            +  S  AF +M NLR L + N        + +P  LE+  + LRLL W  YP       
Sbjct: 499 II--SEGAFKRMRNLRFLSVYNTRYVKNDQVDIPEDLEFPPH-LRLLRWEAYP------- 548

Query: 406 LQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
                  ++ M  S++ +LW+G + L  LK M L+ S +L  +PD + A NLE+L L  C
Sbjct: 549 -------KLDMKESQLEKLWQGTQPLTNLKKMDLTRSSHLKELPDLSNATNLERLELSYC 601

Query: 466 TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTL 525
             L EI  S     KL  L + +CT L  +P  I + SL+  N+                
Sbjct: 602 KSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFFNMH--------------- 646

Query: 526 DVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIEL---LSGLVLLNLKNCRSLEI 582
              G  + ++FP I     H+S L ++ T +  LP SI L   L  L++    N ++L  
Sbjct: 647 ---GCFQLKKFPGI---STHISRLVIDDTLVEELPTSIILCTRLRTLMISGSGNFKTLTY 700

Query: 583 LPVTVS--NLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
           LP++++  +L+C       GC  LK  P++  S++                         
Sbjct: 701 LPLSLTYLDLRC-----TGGCRNLKSLPQLPLSIR------------------------- 730

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
             LN  DC++L  + + + +L S   LN + CFKL
Sbjct: 731 -WLNACDCESLESV-ACVSSLNSFVDLNFTNCFKL 763



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 138/294 (46%), Gaps = 51/294 (17%)

Query: 602 SKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           S+L+K  +  + + +L ++ L  +S +KE+P  +   T LE L LS CK+LV +PSS   
Sbjct: 555 SQLEKLWQGTQPLTNLKKMDLTRSSHLKELPD-LSNATNLERLELSYCKSLVEIPSSFSE 613

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK 720
           L+ L+TL +  C KLE VP TL  + SL+  ++ G                        +
Sbjct: 614 LRKLETLVIHNCTKLEVVP-TLINLASLDFFNMHG----------------------CFQ 650

Query: 721 LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKN----SFVSLPTSITHLS 776
           L    G+ +     + D  L+E  LP+ I     L+ L +S +    +   LP S+T+L 
Sbjct: 651 LKKFPGISTHISRLVIDDTLVE-ELPTSIILCTRLRTLMISGSGNFKTLTYLPLSLTYLD 709

Query: 777 KLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLL 836
                    C+ L+SLPQLP +IR +    C SL +              +AC+ SL   
Sbjct: 710 LRCT---GGCRNLKSLPQLPLSIRWLNACDCESLES--------------VACVSSLNSF 752

Query: 837 G--NKSLAFSMLREYLEAVSNTRQHLSV-VVPGSEIPEWFMYQNEGSSITVTRP 887
              N +  F + +E    +       S+ ++PG E+PE F +Q +G+ +T+ RP
Sbjct: 753 VDLNFTNCFKLNQETRRDLIQQSFFRSLRILPGREVPETFNHQAKGNVLTI-RP 805


>gi|356495059|ref|XP_003516398.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1131

 Score =  298 bits (764), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 232/678 (34%), Positives = 352/678 (51%), Gaps = 83/678 (12%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D + + L  L+   S  VR+IGI GMGG+GKTTIA  ++  +  E++   FL NV+E S
Sbjct: 196 IDKQIQHLESLLHQESKYVRVIGIWGMGGIGKTTIAEEIFSKLRSEYDGYYFLANVKEES 255

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           S+ G + L+R+L S +L   D  + ++    + +  ++ R KVL+V+DDV D    + L 
Sbjct: 256 SRQGTIYLKRKLFSAILG-EDVEMDHMPRLSNYIKRKIGRMKVLIVLDDVNDSNLPEKLF 314

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
            N +WFG GSRIIIT+RD+ +L  + VD++Y+   LN  EAL+LF++ AF       E  
Sbjct: 315 ENHDWFGRGSRIIITTRDKQVLIANKVDDIYQVGALNNSEALELFSLYAFNQNHFDMEYY 374

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS  ++ YA G+PL L+VLG  L G+  + W S L +LE  P ++I   +++SFD L  
Sbjct: 375 KLSEMVVNYAKGIPLVLKVLGRLLCGKDKEVWESQLHKLENMPNTDIYHAMRLSFDDLDR 434

Query: 241 LEKKIFLDIACFF--------------KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLIT 286
            E+KI LD+ACFF              K N+RD             V G+  L +K L+T
Sbjct: 435 KEQKILLDLACFFIGLNLKLDSIKVLLKDNERDDSV----------VAGLERLKDKALVT 484

Query: 287 V-HNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLD 345
           +  +N + MHD++QE+  +IV+++S E+ G RSRL    +V  VL  + GTE +  I  +
Sbjct: 485 ISEDNVISMHDIIQEMAWEIVRQESIEDPGNRSRLIDPNDVYEVLKYNKGTEAIRSIRAN 544

Query: 346 NYHHENEVYLCASAKAFSKMTNLRLLKI-CNLQ----LPNGLEYLSNRLRLLGWRGYPLK 400
               +N   L  S   F+KM+ L+ +    N      LP GL+     LR L W  YPL 
Sbjct: 545 LPAIQN---LQLSPHVFNKMSKLQFVYFRKNFDVFPLLPRGLQSFPAELRYLSWSHYPLI 601

Query: 401 FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
            LP N   +  +   +  S + +LW G+++L  LKV+ ++   NL  +PD + A NLE L
Sbjct: 602 SLPENFSAENLVIFDLSGSLVLKLWDGVQNLMNLKVLTVAGCLNLKELPDLSKATNLEFL 661

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLK 520
            +  C++L  ++PS+L   KL  L+   C SL TL     + SL+ LNL+       G K
Sbjct: 662 EISSCSQLLSMNPSILSLKKLERLSAHHC-SLNTLISDNHLTSLKYLNLR-------GCK 713

Query: 521 CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL 580
            LS   V+               E++ EL L  T++   P +    S L +L+L    ++
Sbjct: 714 ALSQFSVTS--------------ENMIELDLSFTSVSAFPSTFGRQSNLKILSLV-FNNI 758

Query: 581 EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
           E LP +  NL  LR L +    KL                     S+ E+P+S      L
Sbjct: 759 ESLPSSFRNLTRLRYLSVESSRKLHTL------------------SLTELPAS------L 794

Query: 641 ELLNLSDCKNL--VRLPS 656
           E+L+ +DCK+L  V  PS
Sbjct: 795 EVLDATDCKSLKTVYFPS 812



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 177/407 (43%), Gaps = 55/407 (13%)

Query: 555 AIRGLPLSIELLSGLVLLNL----KNCRSLEILPVTVSNLKC-LRSLKLSGCSKLKKFPE 609
           AI+ L LS  + + +  L      KN     +LP  + +    LR L  S    L   PE
Sbjct: 547 AIQNLQLSPHVFNKMSKLQFVYFRKNFDVFPLLPRGLQSFPAELRYLSWSHYP-LISLPE 605

Query: 610 IVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNL 669
              S ++L    L G+ + ++   ++ L  L++L ++ C NL  LP  +    +L+ L +
Sbjct: 606 NF-SAENLVIFDLSGSLVLKLWDGVQNLMNLKVLTVAGCLNLKELPD-LSKATNLEFLEI 663

Query: 670 SGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCS 729
           S C +L ++  ++  ++ LE L        H  S  + I  N +    +LK  +L G  +
Sbjct: 664 SSCSQLLSMNPSILSLKKLERLS------AHHCSLNTLISDNHL---TSLKYLNLRGCKA 714

Query: 730 LRKLNLTDCNLME--------GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNI 781
           L + ++T  N++E         A PS  G   +LK L L  N+  SLP+S  +L++L  +
Sbjct: 715 LSQFSVTSENMIELDLSFTSVSAFPSTFGRQSNLKILSLVFNNIESLPSSFRNLTRLRYL 774

Query: 782 ELEDCKRLQ--SLPQLPPNIRQVRVNGCASLVT-----LLDALKLCKSDSTMIACLD--- 831
            +E  ++L   SL +LP ++  +    C SL T     + +  K  + +     CL+   
Sbjct: 775 SVESSRKLHTLSLTELPASLEVLDATDCKSLKTVYFPSIAEQFKENRREILFWNCLELDE 834

Query: 832 -SLKLLGNKSLAFSMLREYLEAVSNTRQHLSV------------VVPGSEIPEWFMYQNE 878
            SLK +G  +    M   Y    +   +++              V PGS IPEW  Y+  
Sbjct: 835 HSLKAIGFNARINVMKSAYHNLSATGEKNVDFYLRYSRSYQVKYVYPGSSIPEWLEYKTT 894

Query: 879 GSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNN--CFGSYPTH 923
              + +   S  ++   L+G+       V+  S+ +N   F  YP +
Sbjct: 895 KDYLIIDLSSTPHS--TLLGFVFSF---VIAESKDHNRAVFLDYPFY 936


>gi|356495057|ref|XP_003516397.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1067

 Score =  298 bits (763), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 230/646 (35%), Positives = 345/646 (53%), Gaps = 52/646 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++   + L  L+   S  VR+IGI GMGG+GKTTIA  ++  +  E+++  FL+N  E S
Sbjct: 195 IEKSIQHLESLLHQESKYVRVIGIWGMGGIGKTTIAEEMFKKLYSEYDSYYFLENEEEES 254

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRK----KVLLVIDDVVDVKQL 116
            K G +SL+ +L S LL   +N   N+  G   L + ++RK    KVL+V+DDV D   L
Sbjct: 255 RKHGTISLKEKLFSALL--GENVKMNILHG---LSNYVKRKIGFMKVLIVLDDVNDSDLL 309

Query: 117 QSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
           + L GN +WFG GSRIIIT+RD+ +L  + VD++Y    LN  EAL+LF+  AF      
Sbjct: 310 EKLIGNLDWFGRGSRIIITTRDKQVLIANKVDDIYHVGALNSSEALELFSFYAFNQNHLD 369

Query: 177 QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
            E  +LS R++ Y+ G+PL L+VLG  L G+  + W S L++L+  P ++I + +++S+D
Sbjct: 370 MEYYKLSKRVVNYSQGIPLVLKVLGHLLCGKDKEVWESQLDKLKNMPNTDIYNAMRLSYD 429

Query: 237 GLQELEKKIFLDIACFFKGND--RDYVTNFLEGCGFHP--VIGIRVLIEKCLITV-HNNT 291
            L   E+KI LD+ACFF G +   D++   L+        V+G+  L +K LIT+  +N 
Sbjct: 430 DLDRKEQKILLDLACFFMGLNLKVDHIKVLLKDSEKDDSVVVGLERLKDKALITISEDNI 489

Query: 292 LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
           + MHD++QE+  +IV+++S E+ G RSRL    ++  VL  + GTE +  I  D      
Sbjct: 490 ISMHDIIQEMAWEIVRQESIEDPGNRSRLMDPNDIYEVLKYNKGTEAIRSIRADMSVIRK 549

Query: 352 EVYLCASAKAFSKMTNLRLLKICNLQ-------LPNGLEYLSNRLRLLGWRGYPLKFLPS 404
              L  S   F+KM+ L+ L   +         LP+GL+     LR + W  YPLK LP 
Sbjct: 550 ---LQLSPHIFTKMSKLQFLYFPSKYNQDGLSLLPHGLQSFPVELRYVAWMHYPLKSLPK 606

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
           N      +   +  S++ +LW G+++L  LK + +S SENL  +PD + A NLE L +  
Sbjct: 607 NFSAKNIVMFDLSCSQVEKLWDGVQNLMNLKELKVSGSENLKELPDLSKATNLEVLDINI 666

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLST 524
           C RL  + PS+L    L  L++  C SL  +  K  + SL  LNL+S             
Sbjct: 667 CPRLTSVSPSIL---SLKRLSIAYC-SLTKITSKNHLPSLSFLNLESCK----------- 711

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
                  K REF    E+M    EL L  T +  LP S    S L +L L++   +  LP
Sbjct: 712 -------KLREFSVTSENM---IELDLSSTRVNSLPSSFGRQSKLKILRLRDS-GINSLP 760

Query: 585 VTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEV 630
            +  NL  L+ L +    +L    E+  S+K L     D TS+K V
Sbjct: 761 SSFKNLTRLQYLTVYKSRELCTLTELPLSLKTLDA--TDCTSLKTV 804



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 123/281 (43%), Gaps = 49/281 (17%)

Query: 648 CKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSY 707
           C  + +L   +  L +LK L +SG   L+ +P+ L +  +LE LDI+    P  TS    
Sbjct: 620 CSQVEKLWDGVQNLMNLKELKVSGSENLKELPD-LSKATNLEVLDIN--ICPRLTSVSPS 676

Query: 708 IPINLMRKSVAL----------KLPSLSGL----CS-LRKLNLTDCNLME--------GA 744
           I ++L R S+A            LPSLS L    C  LR+ ++T  N++E         +
Sbjct: 677 I-LSLKRLSIAYCSLTKITSKNHLPSLSFLNLESCKKLREFSVTSENMIELDLSSTRVNS 735

Query: 745 LPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRV 804
           LPS  G    LK L L  +   SLP+S  +L++L  + +   + L +L +LP +++ +  
Sbjct: 736 LPSSFGRQSKLKILRLRDSGINSLPSSFKNLTRLQYLTVYKSRELCTLTELPLSLKTLDA 795

Query: 805 NGCASLVTLL--DALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSV 862
             C SL T+L     +  K +   +   + LK L   SL    L  ++  +    QHLS 
Sbjct: 796 TDCTSLKTVLFPSIAQQFKENRKEVLFWNCLK-LDEHSLKAIGLNAHINVMRFAYQHLSA 854

Query: 863 -------------------VVPGSEIPEWFMYQNEGSSITV 884
                              V PG  +PEW  Y+     I +
Sbjct: 855 PDENYDDYDRTYESYQVKYVYPGGIVPEWMEYKTTKDYIII 895


>gi|297790450|ref|XP_002863115.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308939|gb|EFH39374.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1222

 Score =  298 bits (763), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 295/981 (30%), Positives = 441/981 (44%), Gaps = 166/981 (16%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            M    EK+  L+   S +VR+IGI G  G+GKTTIARV+Y+ +S  F+ S F++++    
Sbjct: 240  MREHLEKMEPLLCLDSDEVRLIGIWGPSGIGKTTIARVIYNKLSGSFQLSVFMESIEAKY 299

Query: 61   SK--GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            ++      S + QL  Q +                    L+ KKVL+V+D V    QL +
Sbjct: 300  TRPCSDDYSAKLQLQQQFM--------------------LKDKKVLVVLDGVDQSMQLDA 339

Query: 119  LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
            +A    WFG GSRIIIT++D  L + HG++ +YK    + +EALQ+    AF    P   
Sbjct: 340  MAKETWWFGPGSRIIITTQDRKLFRAHGINHIYKVDFPSTEEALQILCKYAFGQNSPTHG 399

Query: 179  CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
              +L+  + + AG LPLAL                                      DG+
Sbjct: 400  FEELAWEVTQLAGELPLAL--------------------------------------DGV 421

Query: 239  QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
               +K + LD                 E   F P  G R++I      +    + MHDLL
Sbjct: 422  ---DKSMQLDAMV-------------KETWWFGP--GSRIIITTQDRKLFRGYINMHDLL 463

Query: 299  QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLT-ESTGTELVEGIVLDNYHHENEVYLCA 357
             +LG  IV++QS  E G+R  L    E+C VL  ++ G+  V GI  +      +  L  
Sbjct: 464  VKLGIDIVRKQSLREPGQRLFLVDAREICEVLNLDANGSRSVIGINYNFGEDRIKEKLHI 523

Query: 358  SAKAFSKMTNLRLLKI----CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
            S +AF  M+NL+ L+       L LP+GLEY+S +LRLL W  +P+  LP     D  +E
Sbjct: 524  SERAFQGMSNLQFLRFEGNNNTLHLPHGLEYISRKLRLLHWTYFPMTCLPPIFNTDFLVE 583

Query: 414  IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
            + M  S++ +LW+GIK L  LK M L  S  L  +PD + A NL+KL L GC+ L +   
Sbjct: 584  LDMRCSKLEKLWEGIKPLPNLKRMDLRSSLLLKELPDLSTATNLQKLNLSGCSSLVKPPS 643

Query: 474  SLLLHNKLIILNMKDCTSLITLP---GKIL----------------------MKSLEKLN 508
            ++     L  L +  C+SL+ L    G ++                        +L KLN
Sbjct: 644  TIGYTKNLRKLYLGGCSSLVELSFSIGNLINLKELDLSSLSCLVELPFSIGNATNLRKLN 703

Query: 509  LKS------LPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPL 561
            L        LP++I  L  L  LD+S      E P  + ++ +L EL L   + +  LP 
Sbjct: 704  LDQCSSLVELPSSIGNLINLKELDLSSLSCMVELPSSIGNLINLKELDLSSLSCLVELPS 763

Query: 562  SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSE-- 619
            SI   + L LL+L  C SL  LP ++ NL  L+ L LS  S L + P  + +  +L +  
Sbjct: 764  SIGNATPLDLLDLGGCSSLVELPFSIGNLINLKVLNLSSLSCLVELPFSIGNATNLEDLN 823

Query: 620  -----------LFLDGTSIKEV-PSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTL 667
                       L L G S  EV P++I+ L  L  LNL  C NLV+LP SI  L+ L+TL
Sbjct: 824  LRQCSNLKLQTLNLRGCSKLEVLPANIK-LGSLRKLNLQHCSNLVKLPFSIGNLQKLQTL 882

Query: 668  NLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINL----MRKSVALKLP- 722
             L GC KLE++P  +     LE L +           +  I  N+    ++ +   ++P 
Sbjct: 883  TLRGCSKLEDLPANI----KLESLCLLDLTDCLLLKRFPEISTNVETLYLKGTTIEEVPS 938

Query: 723  SLSGLCSLRKLNLTDC-NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNI 781
            S+     L  L+++   NLM      DI     +  LY++      LP  +   S L  +
Sbjct: 939  SIKSWSRLTYLHMSYSENLMNFPHAFDI-----ITRLYVTNTEIQELPPWVKKFSHLREL 993

Query: 782  ELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSL 841
             L+ CK+L SLPQ+P +I  +    C SL  L      C      I          N + 
Sbjct: 994  ILKGCKKLVSLPQIPDSITYIDAEDCESLEKL-----DCSFHDPEIRV--------NSAK 1040

Query: 842  AFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNE-GSSITVTRPSNLYNKKKLVGYA 900
             F + +E  + +  T      ++PG E+P +F +Q+  G S+T+       N+K L    
Sbjct: 1041 CFKLNQEARDLIIQTPTSNYAILPGREVPAYFTHQSATGGSLTIK-----LNEKPLPTSM 1095

Query: 901  --ICCVFHVLKNSRGNNCFGS 919
                C+  V K    N C+ S
Sbjct: 1096 RFKACILLVRKGDDENGCYVS 1116


>gi|297791669|ref|XP_002863719.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309554|gb|EFH39978.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1222

 Score =  298 bits (762), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 188/510 (36%), Positives = 288/510 (56%), Gaps = 15/510 (2%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M +  +K+  L+  GS +VRMIGI G  G+GKTTIARVVY+ +S  F+ S F++++    
Sbjct: 240 MTAHLKKMEPLLCLGSDEVRMIGIWGPSGIGKTTIARVVYNKLSSSFQLSVFMESIESKY 299

Query: 61  SKG------GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
           ++         + LQ+Q +SQ+    D  I      + ++  RL+ KKVL+V+D V    
Sbjct: 300 TRPCSDDYCAKLQLQQQFMSQITNQNDMKI----SHLGVVQDRLKDKKVLVVLDGVDKSM 355

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL ++A    WFG GSRIIIT+++  + + HG++ +YK +  + DEALQ+    AF    
Sbjct: 356 QLDAMAKETWWFGPGSRIIITTQNRKIFREHGINHIYKVNFPSTDEALQILCTYAFGQNS 415

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           P     +L+  + + AG LPL L V+GS+  G S  EW   L RL     ++IL IL+ S
Sbjct: 416 PKHGFEELAREVTQLAGELPLCLRVIGSYFRGMSKLEWTKALPRLRSSLDADILSILKFS 475

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
           +D L + +K +FL IACFF       V  +L          +  L EK LI+++   + M
Sbjct: 476 YDALDDEDKYLFLHIACFFNREWIVKVEEYLAETFLDVSHRLNGLAEKSLISLNRGYINM 535

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLT-ESTGTELVEGIVLDNYHHENEV 353
           HDLL +LG+ IV++QS  E G+R  L    E+C VL  ++ G+  V GI  +   +  + 
Sbjct: 536 HDLLVKLGRDIVRKQSIREPGQRLFLVDAREICDVLNLDANGSRSVMGINFNFGEYRIKE 595

Query: 354 YLCASAKAFSKMTNLRLLKI----CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMD 409
            L  S +AF  M+NL+ L+       + LP+GLEY+S +LRLL W  +P+  LP     +
Sbjct: 596 KLHISERAFQGMSNLQFLRFEGNNNTIHLPHGLEYISRKLRLLHWTYFPMTCLPPIFNTE 655

Query: 410 KTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLY 469
             +E++M YS++ +LW+GIK L  LK M LS S  L  +PD + A NL++L L G + L 
Sbjct: 656 FLVELHMRYSKLEKLWEGIKPLPNLKRMDLSSSLLLKELPDLSTATNLQELNLSGGSSLV 715

Query: 470 EIHPSLLLHNKLIILNMKDCTSLITLPGKI 499
           ++  ++     L  LN++ C+SL+ LP  I
Sbjct: 716 KLPSAIGCTKNLRTLNLRYCSSLMNLPSSI 745


>gi|10177430|dbj|BAB10522.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1055

 Score =  297 bits (761), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 216/664 (32%), Positives = 340/664 (51%), Gaps = 78/664 (11%)

Query: 18  DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLL 77
           DV+MIGI G  G+GKTTIAR +++ +   F  S F+ N+ ++++    + L   LLS++L
Sbjct: 188 DVKMIGIWGPAGIGKTTIARALFNQLFTGFRHSCFMGNI-DVNNYDSKLRLHNMLLSKIL 246

Query: 78  KLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSR 137
              D  I +    +  +   L+ ++VL+V+DDV D++QL+ LA    WFG GSR+I+T +
Sbjct: 247 NQKDMKIHH----LGAIEEWLRNQRVLIVLDDVDDLEQLEVLAKESFWFGPGSRVIVTLK 302

Query: 138 DEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLAL 197
           D+ +L  HG++++Y     +  +AL++F + AFK   P     +L+ +++   G LPLAL
Sbjct: 303 DKKILMAHGINDIYHVDYPSQKKALEIFCLSAFKQSSPQDGFEELARKVVELCGNLPLAL 362

Query: 198 EVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGND 257
            V+GS   G S DEWR  L  +E     +I  +L++ +D L E  + +FL IACFF    
Sbjct: 363 RVVGSSFYGESEDEWRLQLYGIETNLDRKIEHVLRVGYDKLLEKHQSLFLHIACFFNHES 422

Query: 258 RDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTL-WMHDLLQELGQQIVQRQSPEELGK 316
            DYV+  L         G++ L  K L+ +  + L  MH LLQ+LG+Q+V +QS E  GK
Sbjct: 423 VDYVSTMLADSTLDVENGLKTLAAKSLVHISTHGLVRMHCLLQQLGRQVVVQQSGEP-GK 481

Query: 317 RSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKIC-- 374
           R  L + +E+  VL   T +++ E                   + F  M NL+ LK    
Sbjct: 482 RQFLVEAKEIRDVLANETMSKIGE--------------FSIRKRVFEGMHNLKFLKFYNG 527

Query: 375 NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKL 434
           N+ L   ++YL  RLRLL W  YP K LP   Q +  +E+Y+  S++ +LW GI+ L  L
Sbjct: 528 NVSLLEDMKYLP-RLRLLHWDSYPRKRLPLTFQPECLVELYLVSSKLEKLWGGIQPLTNL 586

Query: 435 KVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLIT 494
           K + L +S NL  +P+ + A NLE L L GC  L EI  S+   +KL +L+   C+ L  
Sbjct: 587 KKINLEYSSNLKEIPNLSKATNLETLRLTGCESLMEIPSSISNLHKLEVLDASGCSKLHV 646

Query: 495 LPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT 554
           +P KI                +S LK +   D S   + R FP+I  +++ LS   + GT
Sbjct: 647 IPTKI---------------NLSSLKMVGMDDCS---RLRSFPDISTNIKILS---IRGT 685

Query: 555 AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
            I+  P SI    G++L+  ++ + L  +P +VS L                        
Sbjct: 686 KIKEFPASIVGGLGILLIGSRSLKRLTHVPESVSYL------------------------ 721

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
            DLS      + IK +P  +  L  L+ L + +C+ LV +     +L+S+       C  
Sbjct: 722 -DLSH-----SDIKMIPDYVIGLPHLQHLTIGNCRKLVSIEGHSPSLESIVAYR---CIS 772

Query: 675 LENV 678
           LE++
Sbjct: 773 LESM 776



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 154/352 (43%), Gaps = 52/352 (14%)

Query: 583 LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLTKLE 641
           LP+T    +CL  L L   SKL+K    ++ + +L ++ L+ +S +KE+P+ +   T LE
Sbjct: 554 LPLTFQP-ECLVELYLVS-SKLEKLWGGIQPLTNLKKINLEYSSNLKEIPN-LSKATNLE 610

Query: 642 LLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHS 701
            L L+ C++L+ +PSSI  L  L+ L+ SGC KL  +P  +    +L  L + G      
Sbjct: 611 TLRLTGCESLMEIPSSISNLHKLEVLDASGCSKLHVIPTKI----NLSSLKMVGMDDCSR 666

Query: 702 TSWYSYIPINL----MRKSVALKLPS---------LSGLCSLRKLNLTDCNLMEGALPSD 748
              +  I  N+    +R +   + P+         L G  SL++L           +P  
Sbjct: 667 LRSFPDISTNIKILSIRGTKIKEFPASIVGGLGILLIGSRSLKRLT---------HVPE- 716

Query: 749 IGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCA 808
                S+  L LS +    +P  +  L  L ++ + +C++L S+    P++  +    C 
Sbjct: 717 -----SVSYLDLSHSDIKMIPDYVIGLPHLQHLTIGNCRKLVSIEGHSPSLESIVAYRCI 771

Query: 809 SLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSE 868
           SL ++  +            CL     L N+S    +L            H  + + G+E
Sbjct: 772 SLESMCCSFHRPILKLEFYNCLK----LDNESKRRIILHS---------GHRIIFLTGNE 818

Query: 869 IPEWFMYQNEGSSITVT-RPSNLYNKKKLVGYAICCVFHVLKNSRGN--NCF 917
           +P  F +Q  G+SIT++  P    +      +  C V    KNS  +  NCF
Sbjct: 819 VPAQFTHQTRGNSITISLSPGGEESFSVSSRFRACLVLSPSKNSPYSDINCF 870



 Score = 47.0 bits (110), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 39/187 (20%)

Query: 540 VEHMEHLSELHLEGTA-IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKL 598
           ++ + +L +++LE ++ ++ +P ++   + L  L L  C SL  +P ++SNL  L  L  
Sbjct: 580 IQPLTNLKKINLEYSSNLKEIP-NLSKATNLETLRLTGCESLMEIPSSISNLHKLEVLDA 638

Query: 599 SGCSKLKKFPEIV----------------RSMKDLSE----LFLDGTSIKEVPSSIELLT 638
           SGCSKL   P  +                RS  D+S     L + GT IKE P+SI    
Sbjct: 639 SGCSKLHVIPTKINLSSLKMVGMDDCSRLRSFPDISTNIKILSIRGTKIKEFPASIVGGL 698

Query: 639 KLELLNLSDCKNLVRLPSS-----------------IIALKSLKTLNLSGCFKLENVPET 681
            + L+     K L  +P S                 +I L  L+ L +  C KL ++   
Sbjct: 699 GILLIGSRSLKRLTHVPESVSYLDLSHSDIKMIPDYVIGLPHLQHLTIGNCRKLVSIEGH 758

Query: 682 LGQIESL 688
              +ES+
Sbjct: 759 SPSLESI 765


>gi|224114321|ref|XP_002332397.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832720|gb|EEE71197.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 523

 Score =  297 bits (761), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 175/336 (52%), Positives = 237/336 (70%), Gaps = 3/336 (0%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           +DSR E L   +     +   IGICGMGG+GKTTIARVVYD    +F+ S FL NVR++ 
Sbjct: 188 IDSRVEVLNGFIGEEVGEAIFIGICGMGGIGKTTIARVVYDSFRWQFKGSCFLANVRDVF 247

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           + KGG   LQ QLLS++L +   S+ + + GI+M+  RL+ KK+LL++DDV D KQL+ L
Sbjct: 248 AEKGGPRRLQEQLLSEIL-MERASVCDSYRGIEMIKRRLRLKKILLILDDVNDKKQLEFL 306

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           A    WFG GSRIIITSRD+++   +   ++Y+   LN D+AL LF+ KAFK  QP ++ 
Sbjct: 307 AAEPGWFGPGSRIIITSRDKNVFTGNDDTKIYEAEKLNDDDALMLFSQKAFKNDQPAEDF 366

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V+LS +++ YA GLPLALEV+GSFL GR + EWR  + R+   P  EI+ +L +SFDGL 
Sbjct: 367 VKLSKQVVGYANGLPLALEVIGSFLYGRRIPEWRGAINRMNEIPDDEIIKVLLVSFDGLH 426

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGC-GFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
           ELEKKIFLDIACF KG   D +T  L+G  GFH  IGI VLIE+ LI+V  + +WMH+LL
Sbjct: 427 ELEKKIFLDIACFLKGFKIDRITRILDGWRGFHTGIGIPVLIERSLISVSRDQVWMHNLL 486

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTEST 334
           Q++GQ+I++R+SP+E G+RSRLW  E+VC  L ++T
Sbjct: 487 QKMGQEIIRRESPDEPGRRSRLWTYEDVCLALMDNT 522


>gi|297826151|ref|XP_002880958.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297326797|gb|EFH57217.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 986

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 237/698 (33%), Positives = 352/698 (50%), Gaps = 86/698 (12%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +++   KL  L+   S +V+MIGI G  G+GK+TIAR + + +S  F+        RE  
Sbjct: 188 LEAHLAKLNSLLCLESDEVKMIGIWGPAGIGKSTIARALNNQLSSSFQLK-LWGTSREHD 246

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           SK   + LQ  LLS++L   +  I +    +  +  RL  ++VL+++DDV D+K+L+ LA
Sbjct: 247 SK---LWLQNHLLSKILNQENMKIHH----LGAIKERLHDQRVLIILDDVDDLKKLEVLA 299

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
             R WFG GSRII+T+ D+ +L+ HG+ ++Y     + +EAL++  + AFK         
Sbjct: 300 EERSWFGFGSRIIVTTEDKKILEAHGIKDIYHVDFPSEEEALEILCLSAFKQSSVPDGFE 359

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +++ ++    G LPL L V+G  L G S  EW   L  +E      I DIL++ +D L +
Sbjct: 360 EVANKVAELCGNLPLGLCVVGKSLCGESKQEWELQLSSIEASLDRGIEDILKVGYDRLTK 419

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT---LWMHDL 297
             + +FL IACFF     DYVT  L         G++ L +K L  VH +T   + MH L
Sbjct: 420 KNQSLFLHIACFFNYEKVDYVTTMLADSNLDVRNGLKTLADKSL--VHKSTYGHIVMHHL 477

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           LQ+LG+QIV  QS +E GK   L + +E+C VLT  TGT  V GI  D     N   +  
Sbjct: 478 LQQLGRQIVHEQS-DEPGKHQFLTEADEICDVLTTETGTGSVLGISFDT---SNIGEVSV 533

Query: 358 SAKAFSKMTNLRLLKIC-NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
              AF  M NLR L I  +LQ+P  L      LRLL W+ YP K LP   Q ++ +++ M
Sbjct: 534 GKGAFEGMRNLRFLTIYRSLQIPEDL-DYLPLLRLLHWKYYPRKSLPLRFQPERLVKLRM 592

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
            +S + +LW GI+ L  LK++ L  S  L  +P+ + + NLE+L LE CT L E+  S+ 
Sbjct: 593 RHSNLEKLWGGIQSLPNLKIIDLKLSSELKEIPNLSKSTNLEELTLEYCTSLVELPSSIK 652

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
              KL ILN+  C+ L  +P  I + SLE+                  LD+ G  +   F
Sbjct: 653 NLQKLKILNVDYCSMLQVIPTNINLASLER------------------LDMGGCSRLTTF 694

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIE-LLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
           P+I  ++E L+   L  T I  +P S    LS L  LN+                 C  S
Sbjct: 695 PDISSNIEFLN---LGDTDIEDVPPSAAGCLSRLDHLNI-----------------CSTS 734

Query: 596 LKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           LK     +L   P  +      + L LDG+ I+ +P  +  LT+LE L++  C  L  +P
Sbjct: 735 LK-----RLTHVPLFI------TNLVLDGSDIETIPDCVICLTRLEWLSVESCTKLESIP 783

Query: 656 -----------SSIIALKSL------KTLNLSGCFKLE 676
                       + ++LKS       K L+   CFKL+
Sbjct: 784 GLPPSLRLLEADNCVSLKSFSFHNPTKRLSFRNCFKLD 821



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 185/431 (42%), Gaps = 80/431 (18%)

Query: 602  SKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
            S L+K    ++S+ +L  + L  +S +KE+P+ +   T LE L L  C +LV LPSSI  
Sbjct: 595  SNLEKLWGGIQSLPNLKIIDLKLSSELKEIPN-LSKSTNLEELTLEYCTSLVELPSSIKN 653

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDISG----TAVPHSTSWYSYIPINLMRKS 716
            L+ LK LN+  C  L+ +P  +  + SLE LD+ G    T  P  +S   +  +NL    
Sbjct: 654  LQKLKILNVDYCSMLQVIPTNI-NLASLERLDMGGCSRLTTFPDISSNIEF--LNLGDTD 710

Query: 717  VALKLPSLSG-LCSLRKLNLTDCNLME-GALPSDIGNLCSLKELYLSKNSFVSLPTSITH 774
            +    PS +G L  L  LN+   +L     +P  I NL       L  +   ++P  +  
Sbjct: 711  IEDVPPSAAGCLSRLDHLNICSTSLKRLTHVPLFITNLV------LDGSDIETIPDCVIC 764

Query: 775  LSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLK 834
            L++L  + +E C +L+S+P LPP++R +  + C SL +               +  +  K
Sbjct: 765  LTRLEWLSVESCTKLESIPGLPPSLRLLEADNCVSLKSF--------------SFHNPTK 810

Query: 835  LLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVT-RPSNLYNK 893
             L  ++  F +  E    +     +  V +PG +IP  F ++  G SIT+   P  L   
Sbjct: 811  RLSFRN-CFKLDEEARRGIIQKSIYDYVCLPGKKIPAEFTHKATGRSITIPLAPGTLSAS 869

Query: 894  KKL-----------VGY-AICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDK 941
             +             GY  I C        +  +C    P H L+           FR K
Sbjct: 870  SRFKACLVIFPVNDYGYEGISCSIRSKGGVKVQSC--KLPYHDLS-----------FRSK 916

Query: 942  FGQAGSDHLWL----LYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCG 997
                   HL++    L+  R  CY++ + +      FE NH  +        G ++  CG
Sbjct: 917  -------HLFIVHGDLFRQRSNCYEVDVTMSEI--TFEFNHKYI--------GDKIIECG 959

Query: 998  LHPVYMDEVEE 1008
            +  +  +E E+
Sbjct: 960  VQ-IMTEEAED 969


>gi|359493289|ref|XP_003634561.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Vitis vinifera]
          Length = 944

 Score =  296 bits (759), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 198/510 (38%), Positives = 286/510 (56%), Gaps = 33/510 (6%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQ 75
           S DV M+GI G  G+GKTTIAR +YD IS +F+ + FL N+RE+S K GL  LQ +L   
Sbjct: 220 SRDVLMVGIFGSAGIGKTTIARALYDEISCQFDGASFLANIREVSKKDGLCCLQERLFCD 279

Query: 76  LLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIIT 135
           +L L    +  +    +++ S+   KKVL+V+DDV D KQL+ LAG  +WFG GSRIIIT
Sbjct: 280 IL-LGGRKVM-LLRRDNLMESKFCTKKVLIVLDDVNDKKQLELLAGRHDWFGKGSRIIIT 337

Query: 136 SRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ-PLQECVQLSARIIRYAGGLP 194
            R+EHLL  H VDE Y+   L+  EAL L    A    Q P +  + L     R     P
Sbjct: 338 CRNEHLLLRHKVDESYEFKKLDGLEALALLCHHALTEEQSPFKRFLFLDNIRARCENN-P 396

Query: 195 LALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFK 254
           L L+V GS+L G+    W       EI   S+ L   ++S++ L E EK IFLD+ACFF+
Sbjct: 397 LKLKVAGSYLRGKEDANW-------EIYVNSKFL---KVSYEDLLEEEKDIFLDVACFFQ 446

Query: 255 GNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEEL 314
           G   D+VT  LE   F    G++VL  +CL+T+    LWM + +QE+  +I  +Q+ +  
Sbjct: 447 GECEDFVTKILEKPDFSAKQGVQVLSNRCLLTISEGKLWMDNSIQEMAWKIANKQA-QIP 505

Query: 315 GKRSRLWKEEEVCHVLTESTGTE-LVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI 373
           GK  RLW   ++ HVL  + G   L+EGI L+    +++ +   S +AFS+M  LRLLK+
Sbjct: 506 GKPCRLWDHNKILHVLKRNEGIHALIEGISLELSKSKDKKF---SGEAFSEMDALRLLKV 562

Query: 374 -----C-------NLQLPNGLEYLS-NRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
                C        +       + S ++LR L   GY L   PSN + ++ +E+ M  S 
Sbjct: 563 FLGSGCVNDKETYKVHFSTDFTFPSYDKLRYLHGHGYQLDSFPSNFEAEELLELNMPCSS 622

Query: 421 IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
           + ++     H   L  + LSHS+ L  + +F+  PNLE+L+LEGC  L ++ PS++   K
Sbjct: 623 LKQIKGDEIHFPNLIALDLSHSQQLETISNFSRMPNLERLVLEGCRSLVKVDPSIVNLKK 682

Query: 481 LIILNMKDCTSLITLPGKIL-MKSLEKLNL 509
           L ++N+K C  L +LP +I   K LE L L
Sbjct: 683 LSLMNLKGCKRLKSLPKRICKFKFLETLIL 712



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 113/468 (24%), Positives = 177/468 (37%), Gaps = 125/468 (26%)

Query: 586  TVSNLKCLRSLKL---SGCSKLKKFPEI-------VRSMKDLSELFLDGTSIKEVPSSIE 635
              S +  LR LK+   SGC   K+  ++         S   L  L   G  +   PS+ E
Sbjct: 550  AFSEMDALRLLKVFLGSGCVNDKETYKVHFSTDFTFPSYDKLRYLHGHGYQLDSFPSNFE 609

Query: 636  LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
                LEL N+  C +L ++    I   +L  L+LS   +LE +     ++ +LE L + G
Sbjct: 610  AEELLEL-NMP-CSSLKQIKGDEIHFPNLIALDLSHSQQLETIS-NFSRMPNLERLVLEG 666

Query: 696  TAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSL 755
                               +S+    PS+  L  L  +NL  C  ++ +LP  I     L
Sbjct: 667  C------------------RSLVKVDPSIVNLKKLSLMNLKGCKRLK-SLPKRICKFKFL 707

Query: 756  KELYLS--------------KNSFVSLPTSITH-----LSKLLNI-ELEDCKRLQSLPQL 795
            + L L+              + + V+L  S T+     L   L I  L  CKR Q + +L
Sbjct: 708  ETLILTGCSRLEKLLGDREERQNSVNLKASRTYRRVIILPPALRILHLGHCKRFQEILKL 767

Query: 796  PPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSN 855
            P +I++V    C S+ T                      L  N  L  S+L+       N
Sbjct: 768  PSSIQEVDAYNCISMGT----------------------LSWNTRLEASILQ---RIKIN 802

Query: 856  TRQHLSVVVPGSEIPE-WFMYQNEGSSITVT-RPSNLYNKKKLVGYAICCVFHV------ 907
                 S+V+PG+ IP+ W  ++  GSS+T+  +  + YN   L+G+A+C VF        
Sbjct: 803  PESAFSIVLPGNTIPDCWVTHKVTGSSVTMKLKNPDRYN-DDLLGFAVCLVFAPQAERPQ 861

Query: 908  --------LKN-----SRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLWLLY 954
                    LKN     S G +    +P                   ++G   ++H+WL Y
Sbjct: 862  LNPEILCELKNFTFFYSCGEDSVDEFPESD---------------QEWGNNSTEHVWLAY 906

Query: 955  LSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVY 1002
                              P E NH+  SFE +      VK C +  +Y
Sbjct: 907  RPHARA--------DRCHPKEWNHIKASFEVF---DCVVKKCAIRLIY 943



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 68/136 (50%), Gaps = 4/136 (2%)

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           + L  LH  G  +   P + E    L+ LN+  C SL+ +     +   L +L LS   +
Sbjct: 589 DKLRYLHGHGYQLDSFPSNFEA-EELLELNMP-CSSLKQIKGDEIHFPNLIALDLSHSQQ 646

Query: 604 LKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
           L+      R M +L  L L+G  S+ +V  SI  L KL L+NL  CK L  LP  I   K
Sbjct: 647 LETISNFSR-MPNLERLVLEGCRSLVKVDPSIVNLKKLSLMNLKGCKRLKSLPKRICKFK 705

Query: 663 SLKTLNLSGCFKLENV 678
            L+TL L+GC +LE +
Sbjct: 706 FLETLILTGCSRLEKL 721


>gi|4582487|emb|CAA16927.2| resistence protein-like [Arabidopsis thaliana]
 gi|7268746|emb|CAB78952.1| resistence protein-like [Arabidopsis thaliana]
          Length = 1239

 Score =  296 bits (758), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 187/495 (37%), Positives = 280/495 (56%), Gaps = 41/495 (8%)

Query: 98   LQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLN 157
              +K +LLV+DDV + +  +++ G   WF  G RII+TSR + +L    V + Y+   L+
Sbjct: 768  FHKKTILLVLDDVSNARDAEAVIGGFGWFSHGHRIILTSRSKQVLVQCKVKKPYEIQKLS 827

Query: 158  YDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLE 217
              E+ +L         Q L     + + +I  + G+PLAL++L S +S + +   +  L+
Sbjct: 828  DFESFRL-------CKQYLDGENPVISELISCSSGIPLALKLLVSSVSKQYITNMKDHLQ 880

Query: 218  RLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIR 277
             L  +PP++I +  + SFDGL E EK IFLD+ACFF+G  +DY    L+ CGF   +GI 
Sbjct: 881  SLRKDPPTQIQEAFRRSFDGLDENEKNIFLDLACFFRGQSKDYAVLLLDACGFFTYMGIC 940

Query: 278  VLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTE 337
             LI++ LI++ +N + M    Q++G+ IV  +  E+  +RSRLW  +++  VLT ++GTE
Sbjct: 941  ELIDESLISLVDNKIEMPIPFQDMGRIIVHEED-EDPCERSRLWDSKDIVDVLTNNSGTE 999

Query: 338  LVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI--------CNLQLPNGLEYLSNRL 389
             +EGI LD      E+    S   F KM NLRLLK         C L LP+GL+ L + L
Sbjct: 1000 AIEGIFLDASDLTCEL----SPTVFGKMYNLRLLKFYCSTSGNQCKLTLPHGLDTLPDEL 1055

Query: 390  RLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMP 449
             LL W  YPL +LP        +E+ M YS + +LW+G K+L+KLK + LSHS  L  + 
Sbjct: 1056 SLLHWENYPLVYLPQKFNPVNLVELNMPYSNMEKLWEGKKNLEKLKNIKLSHSRELTDIL 1115

Query: 450  DFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNL 509
              + A NLE + LEGCT L ++  S+    KL+ LNMKDC+ L +LP  + + +L+ LNL
Sbjct: 1116 MLSEALNLEHIDLEGCTSLIDVSMSIPCCGKLVSLNMKDCSRLRSLPSMVDLTTLKLLNL 1175

Query: 510  KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGL 569
                   SG                EF +I +   +L E++L GT+IR LPLSI  L+ L
Sbjct: 1176 -------SGCS--------------EFEDIQDFAPNLEEIYLAGTSIRELPLSIRNLTEL 1214

Query: 570  VLLNLKNCRSLEILP 584
            V L+L+NC  L+ +P
Sbjct: 1215 VTLDLENCERLQEMP 1229



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 87/157 (55%), Gaps = 5/157 (3%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +++  E +  ++   S   RM+GI G  G+GKTTIA+ ++  +S +F    F+   R   
Sbjct: 186 IEAHLEAMSSILRLKSEKARMVGISGPSGIGKTTIAKALFSKLSPQFHLRAFVTYKRTNQ 245

Query: 61  SKGGL-VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
               + +    + LS++L   D  + +    +  +   L  KKVL+++DDV D++ L++L
Sbjct: 246 DDYDMKLCWIEKFLSEILGQKDLKVLD----LGAVEQSLMHKKVLIILDDVDDLELLKTL 301

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGL 156
            G   WFG GSRI++ ++D  LLK H ++ +Y+  GL
Sbjct: 302 VGQTGWFGFGSRIVVITQDRQLLKAHDINLIYEGLGL 338



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/170 (36%), Positives = 92/170 (54%), Gaps = 9/170 (5%)

Query: 492  LITLPGKILMKSLEKLNL--KSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHME--HLS 547
            L+ LP K    +L +LN+   ++     G K L  L        RE  +I+   E  +L 
Sbjct: 1065 LVYLPQKFNPVNLVELNMPYSNMEKLWEGKKNLEKLKNIKLSHSRELTDILMLSEALNLE 1124

Query: 548  ELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKK 606
             + LEG T++  + +SI     LV LN+K+C  L  LP  V +L  L+ L LSGCS+   
Sbjct: 1125 HIDLEGCTSLIDVSMSIPCCGKLVSLNMKDCSRLRSLPSMV-DLTTLKLLNLSGCSE--- 1180

Query: 607  FPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPS 656
            F +I     +L E++L GTSI+E+P SI  LT+L  L+L +C+ L  +PS
Sbjct: 1181 FEDIQDFAPNLEEIYLAGTSIRELPLSIRNLTELVTLDLENCERLQEMPS 1230



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 12/156 (7%)

Query: 650  NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWY---- 705
            N+ +L      L+ LK + LS   +L ++   L +  +LE +D+ G       S      
Sbjct: 1086 NMEKLWEGKKNLEKLKNIKLSHSRELTDIL-MLSEALNLEHIDLEGCTSLIDVSMSIPCC 1144

Query: 706  -SYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLC-SLKELYLSKN 763
               + +N+   S    LPS+  L +L+ LNL+ C+  E     DI +   +L+E+YL+  
Sbjct: 1145 GKLVSLNMKDCSRLRSLPSMVDLTTLKLLNLSGCSEFE-----DIQDFAPNLEEIYLAGT 1199

Query: 764  SFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
            S   LP SI +L++L+ ++LE+C+RLQ +P LP  I
Sbjct: 1200 SIRELPLSIRNLTELVTLDLENCERLQEMPSLPVEI 1235


>gi|342365838|gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1939

 Score =  296 bits (758), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 169/363 (46%), Positives = 241/363 (66%), Gaps = 14/363 (3%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++SR +++   +  G +DVR I I GMGG+GKTTIARVV++ I   FE + FL +VRE  
Sbjct: 93  IESRVKQVICRIGLGLNDVRYINIWGMGGIGKTTIARVVFETIRSIFEVACFLADVREQC 152

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            K  +V +QRQLL Q  ++   ++++ +DG  ++ + L+ KKVLLV+DDV   KQL++LA
Sbjct: 153 EKKDIVHIQRQLLDQT-RINSATVFSEYDGRTIIQNSLRLKKVLLVLDDVNQEKQLENLA 211

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G + WFG GSRIIIT+RD  +LK   + E +K  GL   EA  LF +KAFK  +P +  +
Sbjct: 212 GEQAWFGPGSRIIITTRDVEVLKE--LHETWKVKGLVDSEAFNLFCLKAFKQPEPAEGFL 269

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            L   +I+Y+GGLPLAL+VLGS+L+GR +  W S +E+++    S+I+D+L+IS+DGL  
Sbjct: 270 DLFQEVIKYSGGLPLALKVLGSYLNGRPIAVWHSAIEKIKKSSHSDIIDVLKISYDGLDS 329

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQ 299
           +E  IFLDIACFFKG  + YVT  L+GCG H VIGI VLI + L+T+   + L MHDLL+
Sbjct: 330 MENDIFLDIACFFKGRKKGYVTKILDGCGHHAVIGIDVLINRALVTIDKYDELGMHDLLE 389

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           E+G+ IV ++SP +  KRSRLW  E+V  VLT+             N H  N+ + CA A
Sbjct: 390 EMGKLIVIQESPNDASKRSRLWWCEDVDSVLTQKK----------PNPHDMNQRHYCAKA 439

Query: 360 KAF 362
           ++ 
Sbjct: 440 RSL 442



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 140/429 (32%), Positives = 211/429 (49%), Gaps = 44/429 (10%)

Query: 274  IGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSR-LWKEEEVCHVLTE 332
            +G+  ++EK    V +   W   + +   + +V+R    E G++++   + ++  H + +
Sbjct: 1316 VGVAPIVEK---MVESRLRWFGHVGRRPIEHLVRRVDEMEDGQKAKGRGRPKKTIHEVVK 1372

Query: 333  ST--GTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLR 390
                 TE +  IVL   + E E        +FS M  L+LL +  ++ P  L  + + L+
Sbjct: 1373 RDLHETEAIHSIVLHKVYRETEGKW--RDLSFSNMCKLKLLVLDFVEAPI-LCDIPSTLK 1429

Query: 391  LLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD 450
            +L W+  P++ LP   Q  + +EI++  S+I +LW G K L KL+++ LS    L   PD
Sbjct: 1430 VLHWKCCPMETLPFTDQHYELVEIHLPDSKIVQLWDGKKVLKKLELLNLSCCYKLKETPD 1489

Query: 451  FTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK 510
             +GAP L+ L LE C  L  +HPSL LH  L+ LN+  C S+ TL  K+ M SLE L   
Sbjct: 1490 LSGAPVLKILNLEHCRELNYVHPSLALHKSLVELNLTGCYSIETLADKLEMCSLETL--- 1546

Query: 511  SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLV 570
                   GL C + L        R  PE  E M+ LS L L  T I  +P ++  L+G+ 
Sbjct: 1547 -------GLDCCTRL--------RRLPEFGECMKQLSILILTYTDIEEVPTTLGNLAGVS 1591

Query: 571  LLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG--TSIK 628
             L+L  C  L  LP+T   LK    L+L G  +L   P    S+K      L+G  ++ K
Sbjct: 1592 ELDLTGCDKLTSLPLTGCFLK---KLELHGFVELSCLPHEAPSLK------LEGCFSTSK 1642

Query: 629  EVPSSIEL--LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIE 686
            E     +L  L +L  L+LSD    +R+P SI  L  L  L LS C +LE +PE      
Sbjct: 1643 ESTLYCDLGHLAQLTNLDLSD-NCFIRVPISIHQLPRLTCLKLSFCDELEVLPELPS--- 1698

Query: 687  SLEELDISG 695
            SL EL   G
Sbjct: 1699 SLRELHAQG 1707



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 165/361 (45%), Gaps = 66/361 (18%)

Query: 569  LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIK 628
            L +LNL++CR L  +  +++  K L  L L+GC                        SI+
Sbjct: 1496 LKILNLEHCRELNYVHPSLALHKSLVELNLTGC-----------------------YSIE 1532

Query: 629  EVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
             +   +E+ + LE L L  C  L RLP     +K L  L L+    +E VP TLG +  +
Sbjct: 1533 TLADKLEMCS-LETLGLDCCTRLRRLPEFGECMKQLSILILTYT-DIEEVPTTLGNLAGV 1590

Query: 689  EELDISG----TAVPHSTSWYSYIPINLMRKSVAL--KLPSLSGLCSLRKLNLTDCNLME 742
             ELD++G    T++P +  +   + ++   +   L  + PSL       KL        E
Sbjct: 1591 SELDLTGCDKLTSLPLTGCFLKKLELHGFVELSCLPHEAPSL-------KLEGCFSTSKE 1643

Query: 743  GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
              L  D+G+L  L  L LS N F+ +P SI  L +L  ++L  C  L+ LP+LP ++R++
Sbjct: 1644 STLYCDLGHLAQLTNLDLSDNCFIRVPISIHQLPRLTCLKLSFCDELEVLPELPSSLREL 1703

Query: 803  RVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQH-LS 861
               GC S    LDA  +   D    AC                   + E+ S  R+  L 
Sbjct: 1704 HAQGCDS----LDASNV--DDVISKACCG-----------------FAESASQDREDVLQ 1740

Query: 862  VVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYP 921
            +++ G EIP WF +Q E   ++V+ P N  +  ++V  A+C +F   + ++G   F  YP
Sbjct: 1741 MLITGEEIPGWFEHQEEDEGVSVSFPLNCPS-TEMVALALCFLF---ERTKGYRTFTFYP 1796

Query: 922  T 922
            +
Sbjct: 1797 S 1797


>gi|22325729|ref|NP_179298.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|330251488|gb|AEC06582.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1195

 Score =  296 bits (758), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 223/663 (33%), Positives = 334/663 (50%), Gaps = 59/663 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +  R ++L+  +D    + R++G+ GM G+GKTT+ + +YD   H F+    + N+R+ S
Sbjct: 223 LSQRLKELKEKLDLSRKETRIVGVLGMPGIGKTTLVKRLYDEWKHNFQRHLHMVNIRQKS 282

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            + G  SL+R +L +LL    N I        +    L++K +L++ D V   KQ+Q L 
Sbjct: 283 KEYGTHSLERMILKELLSDTYNDITEEMTYASVKDELLKKKVLLVLDD-VSSKKQIQGLL 341

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ-PLQ-E 178
           GN  W   GSRI+IT+RD+  +     +  Y    LN  + L+ F+  AF+ +  P    
Sbjct: 342 GNLNWIRKGSRIVITTRDK--ISISQFEYTYVVPRLNITDGLKQFSFYAFEDHNCPYPGN 399

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
            + LS + + YA G PLAL++LG  L     D+W   L+ L   P   I D+L+ S+D L
Sbjct: 400 LMDLSTKFVDYARGNPLALKILGRELLSIDKDQWPKRLDTLAQLPIPYIQDLLRASYDDL 459

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLE----GCGFHPVIGIRVLIEKCLITVHNNTLWM 294
              +K++FL +A FF   D  Y+ + ++             +R      LI++ +  L M
Sbjct: 460 SNQQKEVFLVVAWFFGSGDEYYIRSLVDTEDPDSADDAASEVRDFAGNLLISISSGRLEM 519

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEE------------VCHVLTESTGTEL--VE 340
           HDL+    +++    S E       +W  E             V     + T +E+  V 
Sbjct: 520 HDLMATFAKKLCSSLSNENNYGYQMIWNHESFNAAAKNKRMRYVNQPRKKVTESEMDNVM 579

Query: 341 GIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI------------CNLQLPNGLEYLSNR 388
           GI+LD    +N + L   +K FS+M NLR LK+            C L  P+GL+     
Sbjct: 580 GILLDVSEMDNNMTL--DSKFFSEMCNLRYLKVYNSQCSRDCDVGCKLTFPDGLKCSMEN 637

Query: 389 LRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRM 448
           +R L W  +PLK L         IE+ + YS+I  LWK  K + KLK + LSHS  L  +
Sbjct: 638 VRYLYWLQFPLKKLSKAFNPKNLIELNLPYSKITRLWKESKEISKLKWVDLSHSSELCDI 697

Query: 449 PDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN 508
               GA N+ +L LEGC  L  +   +     LI LN+  CT L++LP         +  
Sbjct: 698 SGLIGAHNIRRLNLEGCIELKTLPQEMQEMESLIYLNLGGCTRLVSLP---------EFK 748

Query: 509 LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSG 568
           LKSL T I          +S    F +FP I E +E    L+L+GTAI+ +P SIE L  
Sbjct: 749 LKSLKTLI----------LSHCKNFEQFPVISECLE---ALYLQGTAIKCIPTSIENLQK 795

Query: 569 LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIK 628
           L+LL+LK+C  L  LP  + NL+ L+ L LSGCSKLK FPE+  +MK +  L LDGT+IK
Sbjct: 796 LILLDLKDCEVLVSLPDCLGNLRSLQELILSGCSKLKFFPELKETMKSIKILLLDGTAIK 855

Query: 629 EVP 631
           ++P
Sbjct: 856 QMP 858



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 186/380 (48%), Gaps = 53/380 (13%)

Query: 545  HLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            ++  L+LEG   ++ LP  ++ +  L+ LNL  C  L  LP     LK L++L LS C  
Sbjct: 705  NIRRLNLEGCIELKTLPQEMQEMESLIYLNLGGCTRLVSLPEF--KLKSLKTLILSHCKN 762

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
             ++FP I      L  L+L GT+IK +P+SIE L KL LL+L DC+ LV LP  +  L+S
Sbjct: 763  FEQFPVISEC---LEALYLQGTAIKCIPTSIENLQKLILLDLKDCEVLVSLPDCLGNLRS 819

Query: 664  LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPS 723
            L+ L LSGC KL+  PE    ++S++ L + GTA+                     ++P 
Sbjct: 820  LQELILSGCSKLKFFPELKETMKSIKILLLDGTAIK--------------------QMPI 859

Query: 724  LSGLCSLRKLNLTDCNLMEGALP---SDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLN 780
            L     L+ +     ++    LP   SD     SL  L LS N   SL  +I+ L  L  
Sbjct: 860  L-----LQCIQSQGHSVANKTLPNSLSDYYLPSSLLSLCLSGNDIESLHANISQLYHLKW 914

Query: 781  IELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKL--------CKSDSTMIACLDS 832
            ++L++CK+L+S+  LPPN++ +  +GC SL  +   L +        C    T    LD 
Sbjct: 915  LDLKNCKKLKSVSVLPPNLKCLDAHGCDSLEEVGSPLAVLMVTGKIHCTYIFTNCNKLD- 973

Query: 833  LKLLGNKSLAFSMLREYLEAVSNTRQH--------LSVVVPGSEIPEWFMYQNEGSSITV 884
             ++  +  ++F+  +  + + +  R +        +S   PG E+P  F +Q  G+ +  
Sbjct: 974  -QVAESNIISFTWRKSQMMSDALNRYNGGFVLESLVSTCFPGCEVPASFDHQAYGALLQT 1032

Query: 885  TRPSNLYNKKKLVGYAICCV 904
              P + +   +L G A+C V
Sbjct: 1033 KLPRH-WCDSRLTGIALCAV 1051



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 103/199 (51%), Gaps = 28/199 (14%)

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
           K+L EL L  + I  +    + ++KL+ ++LS    L  + S +I   +++ LNL GC +
Sbjct: 658 KNLIELNLPYSKITRLWKESKEISKLKWVDLSHSSELCDI-SGLIGAHNIRRLNLEGCIE 716

Query: 675 LENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLN 734
           L+ +P+ + ++ESL  L++ G                    +  + LP    L SL+ L 
Sbjct: 717 LKTLPQEMQEMESLIYLNLGGC-------------------TRLVSLPEFK-LKSLKTLI 756

Query: 735 LTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ 794
           L+ C   E   P  + + C L+ LYL   +   +PTSI +L KL+ ++L+DC+ L SLP 
Sbjct: 757 LSHCKNFE-QFP--VISEC-LEALYLQGTAIKCIPTSIENLQKLILLDLKDCEVLVSLPD 812

Query: 795 LPPNIRQVR---VNGCASL 810
              N+R ++   ++GC+ L
Sbjct: 813 CLGNLRSLQELILSGCSKL 831


>gi|22327500|ref|NP_198989.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007335|gb|AED94718.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1046

 Score =  296 bits (758), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 227/694 (32%), Positives = 355/694 (51%), Gaps = 64/694 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYD-LISHEFEASGFLDN---- 55
           M++  ++L  L+   S +V+MIGI G  G+GKTTIAR ++D  +S  F+   F+ N    
Sbjct: 179 MEAHLKRLNSLLCLESDEVKMIGIWGPAGIGKTTIARALFDDRLSSSFQHKCFMGNLKGS 238

Query: 56  VREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQ 115
           ++ ++     + LQ+QLLS++ K  +  I +    +  +  RL  ++VL+++DDV D+KQ
Sbjct: 239 IKGVADHDSKLRLQKQLLSKIFKEENMKIHH----LGAIRERLHDQRVLIILDDVDDLKQ 294

Query: 116 LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP 175
           L+ LA    WFGSGSRII T+ D+ +LK HG+  +Y+    +  +AL++  + AFK    
Sbjct: 295 LEVLAKEISWFGSGSRIIGTTEDKKILKAHGIHNIYRVDFPSKKDALEILCLSAFKQSSI 354

Query: 176 LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
                +L+ ++ +    LPL L V+G+ L G    EW   L R+E     +I DIL+I +
Sbjct: 355 PDGFEELANKVAKLCSNLPLGLCVVGASLRGEGNQEWERLLSRIESSLDRDIDDILRIGY 414

Query: 236 DGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMH 295
           D L   +K +FL IACFF     D VT  L         G   L ++ L+ +      + 
Sbjct: 415 DRLLTNDKSLFLHIACFFNYAKVDNVTALLADSNLDVGNGFNTLADRSLVRISTYDDGI- 473

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
            +L +    IV  QS E  GKR  + + EE+  VLT  TGT  V GI  D     N   +
Sbjct: 474 SVLSDSNLDIVLEQSKEP-GKREFIIEPEEIRDVLTNETGTGSVIGISFDT---SNIGEV 529

Query: 356 CASAKAFSKMTNLRLLKI-------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQM 408
             S  AF  M NLR L+I         LQ+P  ++Y+  RLRLL W  YP K LP   + 
Sbjct: 530 SVSKDAFEGMRNLRFLRIYRLLGGEVTLQIPEDMDYIP-RLRLLYWDRYPRKSLPRRFKP 588

Query: 409 DKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
           ++ +E++M  S +  LW GI+ L  LK++ L+ S  L  +P+ + A NLE+L LE C  L
Sbjct: 589 ERLVELHMPRSNLELLWGGIEPLPNLKIINLNRSYRLKEIPNLSKATNLERLTLESCLSL 648

Query: 469 YEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGLKCL 522
            E+  S+   +KL IL++K C+ L  +P  I + SLE+L+      L++ P   S +K L
Sbjct: 649 VELPSSISNLHKLEILDVKFCSMLQVIPTNINLASLERLDVSGCSRLRTFPDISSNIKTL 708

Query: 523 STLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEI 582
               + G++K  + P  V     L +LH+   +++ L   + +   + LL+L+    +E 
Sbjct: 709 ----IFGNIKIEDVPPSVGCWSRLDQLHISSRSLKRL---MHVPPCITLLSLRGS-GIER 760

Query: 583 LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL 642
           +   V  L  L  L +  C KLK                    SI  +PSS      L++
Sbjct: 761 ITDCVIGLTRLHWLNVDSCRKLK--------------------SILGLPSS------LKV 794

Query: 643 LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
           L+ +DC +L R+  S      + TL+ + C KL+
Sbjct: 795 LDANDCVSLKRVRFSF--HNPMHTLDFNNCLKLD 826



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 158/357 (44%), Gaps = 57/357 (15%)

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
           + PE ++++  L  L+ +    + LP   +    LV L++    +LE+L   +  L  L+
Sbjct: 558 QIPEDMDYIPRLRLLYWDRYPRKSLPRRFKP-ERLVELHMPRS-NLELLWGGIEPLPNLK 615

Query: 595 SLKLSGCSKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNLVR 653
            + L+   +LK+ P + ++  +L  L L+   S+ E+PSSI  L KLE+L++  C  L  
Sbjct: 616 IINLNRSYRLKEIPNLSKAT-NLERLTLESCLSLVELPSSISNLHKLEILDVKFCSMLQV 674

Query: 654 LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTS-WYSYIPINL 712
           +P++I  L SL+ L++SGC +L   P+    I++L   +I    VP S   W     +++
Sbjct: 675 IPTNI-NLASLERLDVSGCSRLRTFPDISSNIKTLIFGNIKIEDVPPSVGCWSRLDQLHI 733

Query: 713 MRKSVA--LKLPSLSGLCSLRKLNL---TDCNLMEGALPSDIGNLCSLKELYLSKNSFVS 767
             +S+   + +P    L SLR   +   TDC                             
Sbjct: 734 SSRSLKRLMHVPPCITLLSLRGSGIERITDC----------------------------- 764

Query: 768 LPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMI 827
               +  L++L  + ++ C++L+S+  LP +++ +  N C SL  +  +           
Sbjct: 765 ----VIGLTRLHWLNVDSCRKLKSILGLPSSLKVLDANDCVSLKRVRFSFHNPMHTLDFN 820

Query: 828 ACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
            CL  L     + +    +  Y            + +P  +IPE F ++  G SIT+
Sbjct: 821 NCL-KLDEEAKRGIIQRSVSRY------------ICLPCKKIPEEFTHKATGKSITI 864


>gi|238481459|ref|NP_001154757.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007336|gb|AED94719.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1114

 Score =  296 bits (757), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 227/694 (32%), Positives = 355/694 (51%), Gaps = 64/694 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYD-LISHEFEASGFLDN---- 55
           M++  ++L  L+   S +V+MIGI G  G+GKTTIAR ++D  +S  F+   F+ N    
Sbjct: 179 MEAHLKRLNSLLCLESDEVKMIGIWGPAGIGKTTIARALFDDRLSSSFQHKCFMGNLKGS 238

Query: 56  VREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQ 115
           ++ ++     + LQ+QLLS++ K  +  I +    +  +  RL  ++VL+++DDV D+KQ
Sbjct: 239 IKGVADHDSKLRLQKQLLSKIFKEENMKIHH----LGAIRERLHDQRVLIILDDVDDLKQ 294

Query: 116 LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP 175
           L+ LA    WFGSGSRII T+ D+ +LK HG+  +Y+    +  +AL++  + AFK    
Sbjct: 295 LEVLAKEISWFGSGSRIIGTTEDKKILKAHGIHNIYRVDFPSKKDALEILCLSAFKQSSI 354

Query: 176 LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
                +L+ ++ +    LPL L V+G+ L G    EW   L R+E     +I DIL+I +
Sbjct: 355 PDGFEELANKVAKLCSNLPLGLCVVGASLRGEGNQEWERLLSRIESSLDRDIDDILRIGY 414

Query: 236 DGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMH 295
           D L   +K +FL IACFF     D VT  L         G   L ++ L+ +      + 
Sbjct: 415 DRLLTNDKSLFLHIACFFNYAKVDNVTALLADSNLDVGNGFNTLADRSLVRISTYDDGI- 473

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
            +L +    IV  QS E  GKR  + + EE+  VLT  TGT  V GI  D     N   +
Sbjct: 474 SVLSDSNLDIVLEQSKEP-GKREFIIEPEEIRDVLTNETGTGSVIGISFDT---SNIGEV 529

Query: 356 CASAKAFSKMTNLRLLKI-------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQM 408
             S  AF  M NLR L+I         LQ+P  ++Y+  RLRLL W  YP K LP   + 
Sbjct: 530 SVSKDAFEGMRNLRFLRIYRLLGGEVTLQIPEDMDYIP-RLRLLYWDRYPRKSLPRRFKP 588

Query: 409 DKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRL 468
           ++ +E++M  S +  LW GI+ L  LK++ L+ S  L  +P+ + A NLE+L LE C  L
Sbjct: 589 ERLVELHMPRSNLELLWGGIEPLPNLKIINLNRSYRLKEIPNLSKATNLERLTLESCLSL 648

Query: 469 YEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGLKCL 522
            E+  S+   +KL IL++K C+ L  +P  I + SLE+L+      L++ P   S +K L
Sbjct: 649 VELPSSISNLHKLEILDVKFCSMLQVIPTNINLASLERLDVSGCSRLRTFPDISSNIKTL 708

Query: 523 STLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEI 582
               + G++K  + P  V     L +LH+   +++ L   + +   + LL+L+    +E 
Sbjct: 709 ----IFGNIKIEDVPPSVGCWSRLDQLHISSRSLKRL---MHVPPCITLLSLRGS-GIER 760

Query: 583 LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL 642
           +   V  L  L  L +  C KLK                    SI  +PSS      L++
Sbjct: 761 ITDCVIGLTRLHWLNVDSCRKLK--------------------SILGLPSS------LKV 794

Query: 643 LNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
           L+ +DC +L R+  S      + TL+ + C KL+
Sbjct: 795 LDANDCVSLKRVRFSF--HNPMHTLDFNNCLKLD 826



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 158/357 (44%), Gaps = 57/357 (15%)

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
           + PE ++++  L  L+ +    + LP   +    LV L++    +LE+L   +  L  L+
Sbjct: 558 QIPEDMDYIPRLRLLYWDRYPRKSLPRRFKP-ERLVELHMPRS-NLELLWGGIEPLPNLK 615

Query: 595 SLKLSGCSKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNLVR 653
            + L+   +LK+ P + ++  +L  L L+   S+ E+PSSI  L KLE+L++  C  L  
Sbjct: 616 IINLNRSYRLKEIPNLSKAT-NLERLTLESCLSLVELPSSISNLHKLEILDVKFCSMLQV 674

Query: 654 LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTS-WYSYIPINL 712
           +P++I  L SL+ L++SGC +L   P+    I++L   +I    VP S   W     +++
Sbjct: 675 IPTNI-NLASLERLDVSGCSRLRTFPDISSNIKTLIFGNIKIEDVPPSVGCWSRLDQLHI 733

Query: 713 MRKSVA--LKLPSLSGLCSLRKLNL---TDCNLMEGALPSDIGNLCSLKELYLSKNSFVS 767
             +S+   + +P    L SLR   +   TDC                             
Sbjct: 734 SSRSLKRLMHVPPCITLLSLRGSGIERITDC----------------------------- 764

Query: 768 LPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMI 827
               +  L++L  + ++ C++L+S+  LP +++ +  N C SL  +  +           
Sbjct: 765 ----VIGLTRLHWLNVDSCRKLKSILGLPSSLKVLDANDCVSLKRVRFSFHNPMHTLDFN 820

Query: 828 ACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
            CL  L     + +    +  Y            + +P  +IPE F ++  G SIT+
Sbjct: 821 NCL-KLDEEAKRGIIQRSVSRY------------ICLPCKKIPEEFTHKATGKSITI 864


>gi|297794743|ref|XP_002865256.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311091|gb|EFH41515.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1184

 Score =  295 bits (755), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 245/726 (33%), Positives = 365/726 (50%), Gaps = 103/726 (14%)

Query: 4   RCEKLRFLMD-SGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK 62
           R ++L  L+D    S V ++G+ GM G+ KTT+A  VY      F+   FL N+      
Sbjct: 132 RMQELEKLLDLKRKSCVIVVGVLGMAGIRKTTVADCVYKRNYSRFDGYCFLANINNEERL 191

Query: 63  GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGN 122
            GL  LQ++LL +LL   +  +       + L  RLQ K++ +V+DDV +  Q++ L G 
Sbjct: 192 HGLNHLQQKLLRKLLDEENLDVGAPEGAHEALKDRLQNKRLFIVLDDVTNEDQIRILIGQ 251

Query: 123 --REWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFK-TYQPLQE- 178
             ++ +  GSRI+IT+RD+ LL+   VD  Y    L   EAL+LF + AF     P  E 
Sbjct: 252 WKQKLYREGSRIVITTRDKKLLEK-VVDATYVVPRLRDREALELFCLNAFSCNLSPNTEF 310

Query: 179 CVQLSARIIRYAGGLPLALEVLGS------FLSGRSVDEWRSTLERLEIEPPSEILDILQ 232
              +   +     G P+ L++LGS        +GR  + WR                   
Sbjct: 311 MASIRPSLSIMLKGHPVTLKLLGSDRCQGTNFTGR--ESWR------------------- 349

Query: 233 ISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTL 292
              D  +   K IFLDIACFFK    D+V+  L          I  L++KCL+T+++N L
Sbjct: 350 ---DWRKGQTKSIFLDIACFFKSGKTDFVSRILNTDHIDATTLIDDLVDKCLVTIYDNRL 406

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            MHDLL  +G++I    S +E G + RLW ++++C +L   TGT    GI LD  + EN 
Sbjct: 407 EMHDLLLTMGKEIGYESSIKEAGNQGRLWNQDDICRLLKYKTGTAETRGIFLDMSNLEN- 465

Query: 353 VYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
             +  S   F+KM NL+ LK  +                L   GYPL++LPSN    K +
Sbjct: 466 --MKLSPDVFTKMWNLKFLKFFS----------------LFSMGYPLEYLPSNFNPKKLV 507

Query: 413 EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
           ++ + +S +  LW+  K+  +L+ + +SHS++L+ +     A N+E+L  E CT L +  
Sbjct: 508 DLNLRHSHLKTLWEEEKNTAELRWLDISHSKDLLSLSGLLDARNIERLNAECCTSLIKC- 566

Query: 473 PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLK 532
            S+   + L+ LN ++CTSL +LP  I +KSL+ L L                  SG  K
Sbjct: 567 SSIRQMDSLVYLNFRECTSLKSLPKGISLKSLKSLIL------------------SGCSK 608

Query: 533 FREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKC 592
            R FP I E++E    L+L+GTAI+ +P SI+ L  L +LNLK C  L  LP  +  +K 
Sbjct: 609 LRTFPTISENIE---SLYLDGTAIKRVPESIDSLRYLAVLNLKKCCKLRHLPSNLCKMKS 665

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP---------------SSIELL 637
           L+ L LSGCSKLK FPEI   M+ L  L +D T+IK++P               S  +  
Sbjct: 666 LQELILSGCSKLKCFPEIDEDMEHLEILLMDDTAIKQIPIKMCMSNLKMFTFGGSKFQGS 725

Query: 638 TKLELLNLSDCK----------NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
           T  ELL  S C           NL +LP++   L S+ +L LS    LE +PE++  +  
Sbjct: 726 TGYELLPFSGCSHLSDLYLTDCNLHKLPNNFSCLSSVHSLCLSR-NNLEYLPESIKILHH 784

Query: 688 LEELDI 693
           L+ LD+
Sbjct: 785 LKSLDL 790



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 170/539 (31%), Positives = 247/539 (45%), Gaps = 77/539 (14%)

Query: 562  SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
            SI  +  LV LN + C SL+ LP  +S LK L+SL LSGCSKL+ FP I    +++  L+
Sbjct: 568  SIRQMDSLVYLNFRECTSLKSLPKGIS-LKSLKSLILSGCSKLRTFPTIS---ENIESLY 623

Query: 622  LDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPET 681
            LDGT+IK VP SI+ L  L +LNL  C  L  LPS++  +KSL+ L LSGC KL+  PE 
Sbjct: 624  LDGTAIKRVPESIDSLRYLAVLNLKKCCKLRHLPSNLCKMKSLQELILSGCSKLKCFPEI 683

Query: 682  LGQIESLEELDISGTAVPHSTSWYSYIPINL--------------MRKSVALKLPSLSGL 727
               +E LE L +  TA+         IPI +               + S   +L   SG 
Sbjct: 684  DEDMEHLEILLMDDTAIKQ-------IPIKMCMSNLKMFTFGGSKFQGSTGYELLPFSGC 736

Query: 728  CSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCK 787
              L  L LTDCNL +  LP++   L S+  L LS+N+   LP SI  L  L +++L+ C+
Sbjct: 737  SHLSDLYLTDCNLHK--LPNNFSCLSSVHSLCLSRNNLEYLPESIKILHHLKSLDLKHCR 794

Query: 788  RLQSLPQLPPNIRQVRVNGCASLVTLL-------------------DALKLCKSDSTMIA 828
            +L SLP LP N++ +  + CASL T+                    D  KL +     I 
Sbjct: 795  KLNSLPVLPSNLQYLDAHDCASLETVANPMTHLVLAERVQSTFLFTDCFKLNREAQENIV 854

Query: 829  CLDSLK--LLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTR 886
                LK  +L N  L  +     LE ++      SV  PGS++P WF  Q  G+SI    
Sbjct: 855  AHAQLKSQILANACLKRNHKGLVLEPLA------SVSFPGSDLPLWFRNQRMGTSIDTHL 908

Query: 887  PSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGI----GFRDKF 942
            P + +   K  G ++C V          + F      +     G  I  I    G+    
Sbjct: 909  PPH-WCDSKFRGLSLCVVVSFKDYEDQTSRFSVICKCKFKSESGDCIRFICTLGGWNKLC 967

Query: 943  GQA-------GSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQ------ 989
            G +       GSDH++L Y     C+ ++   E   +     +   SF+ ++        
Sbjct: 968  GSSGHQSRKLGSDHVFLSY---NNCFHVKKFREDGNDNNRCCNTAASFKFFVTDDSKRKL 1024

Query: 990  -GLEVKMCGLHPVYM-DEVEELDQTTNQPSRFTVYNLNEFDQHFVGSKMIVATTSKRSL 1046
               EV  CG+  +Y  DE +   Q T + +   V +++E D+H  GS   V    + S 
Sbjct: 1025 GSFEVVKCGMGLLYAPDESDYRLQETLENNLKEVTSIHEADRHENGSGEAVLLKRRNSF 1083


>gi|105923235|gb|ABF81465.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1139

 Score =  295 bits (754), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 240/692 (34%), Positives = 349/692 (50%), Gaps = 123/692 (17%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +DSR + +  ++   + DVR +GI GMGG+GKTTIA+ V++ + +EFE S  L N++EIS
Sbjct: 384 IDSRVKDVVSMLSVYTDDVRTVGIYGMGGIGKTTIAKAVFNELCNEFEGSCCLLNIKEIS 443

Query: 61  SK-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            +  GLV LQ QL+S L++     I NV  G  ++  RL  K+VL+V+DD+  +KQL +L
Sbjct: 444 EQPSGLVQLQEQLISDLIQSKTFKINNVDRGSALIKERLCHKRVLVVLDDLDQLKQLGAL 503

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G R WFG GSR+IIT+RDEHLL    V   Y    LN+DE+LQLF   AFK  +P +E 
Sbjct: 504 MGERNWFGLGSRVIITTRDEHLLTQLQVHNKYLVEELNHDESLQLFIAHAFKENRPTEEF 563

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           + +S  +++Y GGLPLALEVLGS+L  RS+ EWRS  +             LQISF+ L 
Sbjct: 564 LGISKGVVQYVGGLPLALEVLGSYLCKRSIGEWRSARK-------------LQISFNALD 610

Query: 240 ELE-KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDL 297
           + + K IFLDI CFF G D DYV+  L+GCGFH  IGI VL+++ LIT +  N L MHDL
Sbjct: 611 DDDIKGIFLDITCFFIGMDVDYVSKLLDGCGFHSRIGIEVLMQRSLITTNWYNKLRMHDL 670

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           L+++G++I++  SP+  GKR RL  +++                 VLD            
Sbjct: 671 LRDMGREIIREMSPDHPGKRRRLCFQKD-----------------VLD------------ 701

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
              A  K   L  LKI NL       +LS     +G        LP    +++ I +  C
Sbjct: 702 ---ALRKKMFLNRLKILNLSYS---VHLSTPPHFMG--------LPC---LERII-LEGC 743

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
            S + E+ + I HLD L +                       L LEGC  L  +  S+  
Sbjct: 744 TSLV-EVHQSIGHLDSLTL-----------------------LNLEGCKSLKNLPESICY 779

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
              L  LN+  C                 +NL+ LP  +  ++ L+ L   G       P
Sbjct: 780 LKCLESLNISRC-----------------INLEKLPDQLGDMEALTMLLADG-TAIERLP 821

Query: 538 EIVEHMEHLSELHLEG-----TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKC 592
             + H+++LS L L G     +++      +  LS      + N R+L  LP T + L  
Sbjct: 822 SSIGHLKNLSNLSLGGFKYDLSSVSWFSHILPWLSP----RISNPRAL--LP-TFTGLNS 874

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV 652
           LR L LS C  L    ++   +  L EL      +  +P+ I+ L +L++L L  C +L+
Sbjct: 875 LRRLDLSYCG-LSDGTDL-GGLSSLQELNFTRNKLNNLPNGIDRLPELQVLCLYHCADLL 932

Query: 653 RLPSSIIALKSLKTLNLSGCFKL----ENVPE 680
            +      L SL   + +   +L    +NVP+
Sbjct: 933 SISDLPSTLHSLMVYHCTSIERLSIHSKNVPD 964



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 134/431 (31%), Positives = 197/431 (45%), Gaps = 97/431 (22%)

Query: 492  LITLPGKILMKSLEKLNLK-----SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHL 546
            L  L  K+ +  L+ LNL      S P    GL CL  +             I+E    L
Sbjct: 700  LDALRKKMFLNRLKILNLSYSVHLSTPPHFMGLPCLERI-------------ILEGCTSL 746

Query: 547  SELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKK 606
             E+H           SI  L  L LLNL+ C+SL+ LP ++  LKCL SL +S C  L+K
Sbjct: 747  VEVHQ----------SIGHLDSLTLLNLEGCKSLKNLPESICYLKCLESLNISRCINLEK 796

Query: 607  FPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKT 666
             P+ +  M+ L+ L  DGT+I+                        RLPSSI  LK+L  
Sbjct: 797  LPDQLGDMEALTMLLADGTAIE------------------------RLPSSIGHLKNLSN 832

Query: 667  LNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYI-PINLMRKSVALK-LPSL 724
            L+L G FK                 D+S      S SW+S+I P    R S     LP+ 
Sbjct: 833  LSLGG-FK----------------YDLS------SVSWFSHILPWLSPRISNPRALLPTF 869

Query: 725  SGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELE 784
            +GL SLR+L+L+ C L +G   +D+G L SL+EL  ++N   +LP  I  L +L  + L 
Sbjct: 870  TGLNSLRRLDLSYCGLSDG---TDLGGLSSLQELNFTRNKLNNLPNGIDRLPELQVLCLY 926

Query: 785  DCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIAC-----LDSLKLLGNK 839
             C  L S+  LP  +  + V  C S+  L    K    D  ++ C     +  L  +GNK
Sbjct: 927  HCADLLSISDLPSTLHSLMVYHCTSIERLSIHSKNV-PDMYLVNCQQLSDIQGLGSVGNK 985

Query: 840  SLAF--------SMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLY 891
             L +        +  +  L+A S   +HL + +  SEIP+WF ++ +GSSI+   P +  
Sbjct: 986  PLIYVDNCSKLANNFKSLLQA-SFKGEHLDICLRDSEIPDWFSHRGDGSSISFYVPDS-- 1042

Query: 892  NKKKLVGYAIC 902
              + L+ + +C
Sbjct: 1043 EIQGLIVWIVC 1053


>gi|15238104|ref|NP_198969.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10178008|dbj|BAB11460.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007307|gb|AED94690.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1038

 Score =  295 bits (754), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 226/644 (35%), Positives = 338/644 (52%), Gaps = 47/644 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D+   KL  L+   S +V+MIGI G  G+GKTTIAR +Y+ +S  F+   F+ N++   
Sbjct: 187 LDAHLRKLDSLLCLNSDEVKMIGIWGPAGIGKTTIARALYNQLSTNFQFKCFMGNLKGSY 246

Query: 61  SKGGL------VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
              G+      ++LQ QLLS++L   D       D +  +   L+ KKVL+VIDDV D++
Sbjct: 247 KSIGVDNYDWKLNLQNQLLSKILNQNDVKT----DHLGGIKDWLEDKKVLIVIDDVDDLE 302

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDE--VYKPHGLNYDEALQLFNMKAFKT 172
           QL +LA    WFGSGSRII+T++D+ ++KT  V++   Y         AL++  + AF+ 
Sbjct: 303 QLLALAKEPSWFGSGSRIIVTTKDKTIMKTLLVNDNNFYHVGYPTNKVALEILCLSAFQK 362

Query: 173 YQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQ 232
             P     +L+ ++    G LPL L V+GS L G+S   W+   +RLE     +I D+L+
Sbjct: 363 SFPRDGFEELARKVAYLCGNLPLCLSVVGSSLRGQSKHRWKLQSDRLETSLDRKIEDVLK 422

Query: 233 ISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NT 291
            +++ L + E+ +FL IACFF       V   L         G++ L +KCL+ +   + 
Sbjct: 423 SAYEKLSKKEQVLFLHIACFFNNTYISVVKTLLADSNLDVRNGLKTLADKCLVHISRVDR 482

Query: 292 LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
           ++MH LLQ+LG+ IV  QS +E  KR  L + EE+  VL   TGT  V GI  D      
Sbjct: 483 IFMHPLLQQLGRYIVLEQS-DEPEKRQFLVEAEEIRDVLANETGTGSVLGISFDMSKVSE 541

Query: 352 EVYLCASAKAFSKMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLP 403
                 S +AF  M NLR L+I          L++   ++YL  RLRLL W  YP K LP
Sbjct: 542 ---FSISGRAFEAMRNLRFLRIYRRSSSKKVTLRIVEDMKYLP-RLRLLHWEHYPRKSLP 597

Query: 404 SNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
              Q ++ + ++M +S + +LW GI+ L  LK + LS S  L  +P+ + A NLE L L 
Sbjct: 598 RRFQPERLVVLHMPHSNLEKLWGGIQSLTNLKNIDLSFSRKLKEIPNLSNATNLETLTLI 657

Query: 464 GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTIS 517
            C+ L E+  S+    KL  L M  C  L  +P  I + SLEK++      L S P    
Sbjct: 658 KCSSLVELPSSISNLQKLKALMMFGCKMLKVVPTNINLVSLEKVSMTLCSQLSSFPDISR 717

Query: 518 GLKCLSTLDVSGDLKFREF-PEIVEHMEHLSELHLEGTAIRGL---PLSIELLSGLVLLN 573
            +K   +LDV G  K  E  P +V++   L +L LE  +++ L   P SI +LS    L+
Sbjct: 718 NIK---SLDV-GKTKIEEVPPSVVKYWSRLDQLSLECRSLKRLTYVPPSITMLS----LS 769

Query: 574 LKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDL 617
             +   +E +P  V  L  LR+L +  C KL   P +  S++ L
Sbjct: 770 FSD---IETIPDCVIRLTRLRTLTIKCCRKLVSLPGLPPSLEFL 810



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 103/427 (24%), Positives = 190/427 (44%), Gaps = 64/427 (14%)

Query: 539 IVEHMEHLSEL---HLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
           IVE M++L  L   H E    + LP   +    LV+L++ +  +LE L   + +L  L++
Sbjct: 573 IVEDMKYLPRLRLLHWEHYPRKSLPRRFQP-ERLVVLHMPHS-NLEKLWGGIQSLTNLKN 630

Query: 596 LKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           + LS   KLK+ P +  +    +   +  +S+ E+PSSI  L KL+ L +  CK L  +P
Sbjct: 631 IDLSFSRKLKEIPNLSNATNLETLTLIKCSSLVELPSSISNLQKLKALMMFGCKMLKVVP 690

Query: 656 SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRK 715
           ++I  L SL+ ++++ C +L + P+    I+SL+        VP S   Y          
Sbjct: 691 TNI-NLVSLEKVSMTLCSQLSSFPDISRNIKSLDVGKTKIEEVPPSVVKYWS-------- 741

Query: 716 SVALKLPSLSGLC-SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITH 774
               +L  LS  C SL++L           +P       S+  L LS +   ++P  +  
Sbjct: 742 ----RLDQLSLECRSLKRLTY---------VPP------SITMLSLSFSDIETIPDCVIR 782

Query: 775 LSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLK 834
           L++L  + ++ C++L SLP LPP++  +  N C SL               + +  + +K
Sbjct: 783 LTRLRTLTIKCCRKLVSLPGLPPSLEFLCANHCRSL-------------ERVHSFHNPVK 829

Query: 835 LLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKK 894
           LL   +    +  +   A+   R    + +PG ++P  F ++  G+SIT+          
Sbjct: 830 LLIFHN-CLKLDEKARRAIKQQRVEGYIWLPGKKVPAEFTHKATGNSITIPLAPVAGTFS 888

Query: 895 KLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNC--HIGHGIYGIGFRDKF-----GQAGS 947
               +  C +F  +++         +PT+ + C   I  G+    F  +       +  +
Sbjct: 889 VSSRFKACLLFSPIED---------FPTNDITCRLRIKGGVQINKFYHRVVILESSKIRT 939

Query: 948 DHLWLLY 954
           +HL++ Y
Sbjct: 940 EHLFIFY 946


>gi|297805476|ref|XP_002870622.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316458|gb|EFH46881.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1127

 Score =  295 bits (754), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 235/731 (32%), Positives = 363/731 (49%), Gaps = 84/731 (11%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-- 58
           +++   KL+ ++   S +V+MIGI G  G+GK+TIAR + + +S  F+   F+ N++   
Sbjct: 220 LEAHLAKLKSMLCLESDEVKMIGIWGPAGIGKSTIARALDNQLSSSFQLKCFMGNLKGSL 279

Query: 59  -----ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDV 113
                +      + LQ QL+S++L   +  I +    +  +  RL  ++VL+++DDV D+
Sbjct: 280 KSIVGVDEHDSKLWLQNQLMSKILNQENMKIHH----LGAIKERLHDQRVLIILDDVDDL 335

Query: 114 KQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY 173
           K L+ LA    WFG GSRII+T+ D+ +LK HG++++Y  +  + ++AL++  + AFK  
Sbjct: 336 KILEVLAEELSWFGFGSRIIVTTEDKKILKAHGINDIYHVNFPSKEDALEILCLSAFKQS 395

Query: 174 QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
                  +++ ++    G LPL L V+G  L G+    W   L R+E     +I DIL+I
Sbjct: 396 SVPDGFEEVAKKVANLCGKLPLGLCVVGKSLRGQRKHVWELQLSRIEASLDRKIEDILRI 455

Query: 234 SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT-L 292
            FD L +  + +FL IACFF     D VT  L         G+  L +K L+    +  +
Sbjct: 456 GFDRLSKKNQSLFLHIACFFNNEVADDVTTLLSDSNLDVGNGLETLADKSLVRKSTSGHI 515

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            MH LLQ+LG+QIV  QS +E GKR  L++ +E+C VL+  TGT  V GI  D     N 
Sbjct: 516 VMHHLLQQLGRQIVHEQS-DEPGKRQFLFEADEICDVLSTETGTGSVIGISFDT---SNI 571

Query: 353 VYLCASAKAFSKMTNLRLLKIC--------NLQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
             +     AF  M NLR L+I          LQ+P  L      LRLL W  YP   LP 
Sbjct: 572 GEVSVGKGAFEGMRNLRFLRIFRRWFGGEGTLQIPEDL-DYLPLLRLLHWEFYPRTSLPR 630

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
             Q ++ +E++M YS+I +LW GI+ L  LK++ L  S  L  +P+ + A NLE+L LEG
Sbjct: 631 RFQPERLMELHMPYSKIKKLWGGIQSLPNLKIIDLMFSRQLKEIPNLSNATNLEELTLEG 690

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLST 524
           C  L E+  S+    KL IL++  C  L  +P  I + SL+ L +               
Sbjct: 691 CGSLVELPSSIKNLQKLKILDVGFCCMLQVIPSNINLASLKILTM--------------- 735

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIE-LLSGLVLLNLKNCRSLEIL 583
              +G  + R FPEI  +++    L+L  T I  +P S+   LS L  LN+         
Sbjct: 736 ---NGCSRLRTFPEISSNIK---VLNLGDTDIEDVPPSVAGCLSRLDRLNI--------- 780

Query: 584 PVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELL 643
                   C  SLK     +L   P  +      ++L L+G+ I+ +P  +  LT+LE L
Sbjct: 781 --------CSSSLK-----RLTHVPLFI------TDLILNGSDIETIPDCVIGLTRLEWL 821

Query: 644 NLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV------PETLGQIESLEELDISGTA 697
           ++  C  L  +P       SLK L+ + C  L+ V      P  + Q  +  +LD     
Sbjct: 822 SVKRCTKLESIPG---LPPSLKVLDANDCVSLKRVRFSFHTPTNVLQFSNCLKLDKESRR 878

Query: 698 VPHSTSWYSYI 708
                S Y Y+
Sbjct: 879 GIIQKSIYDYV 889



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 148/343 (43%), Gaps = 68/343 (19%)

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           E L ELH+  + I+ L   I+ L  L +++L   R L+ +P  +SN   L  L L GC  
Sbjct: 635 ERLMELHMPYSKIKKLWGGIQSLPNLKIIDLMFSRQLKEIP-NLSNATNLEELTLEGCG- 692

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
                                 S+ E+PSSI+ L KL++L++  C  L  +PS+I  L S
Sbjct: 693 ----------------------SLVELPSSIKNLQKLKILDVGFCCMLQVIPSNI-NLAS 729

Query: 664 LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPS 723
           LK L ++GC +L   PE    I+ L   D     VP                      PS
Sbjct: 730 LKILTMNGCSRLRTFPEISSNIKVLNLGDTDIEDVP----------------------PS 767

Query: 724 LSG-LCSLRKLNLTDCNLME-GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNI 781
           ++G L  L +LN+   +L     +P        + +L L+ +   ++P  +  L++L  +
Sbjct: 768 VAGCLSRLDRLNICSSSLKRLTHVP------LFITDLILNGSDIETIPDCVIGLTRLEWL 821

Query: 782 ELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSL 841
            ++ C +L+S+P LPP+++ +  N C SL  +  +     +      CL           
Sbjct: 822 SVKRCTKLESIPGLPPSLKVLDANDCVSLKRVRFSFHTPTNVLQFSNCL----------- 870

Query: 842 AFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
              + +E    +     +  V +PG  IP  F ++  G SIT+
Sbjct: 871 --KLDKESRRGIIQKSIYDYVCLPGKNIPADFTHKATGRSITI 911


>gi|15222558|ref|NP_176572.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12325006|gb|AAG52448.1|AC010852_5 putative disease resistance protein; 24665-28198 [Arabidopsis
           thaliana]
 gi|332196042|gb|AEE34163.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1017

 Score =  295 bits (754), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 205/626 (32%), Positives = 327/626 (52%), Gaps = 56/626 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-- 58
           +++   +++ L+D  + +V+++ I G  G+GKTTIAR +Y L+S  F+ S F+DN+R   
Sbjct: 190 IEAHLREIKSLLDLDNVEVKIVAIAGPAGIGKTTIARALYGLLSKRFQLSCFVDNLRGSY 249

Query: 59  ---ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQ 115
                  G  + LQ Q LS++L  +   I +    +  +   L  ++VL+++DDV  +KQ
Sbjct: 250 HSGFDEYGFKLHLQEQFLSKVLNQSGMRICH----LGAIKENLSDQRVLIILDDVNKLKQ 305

Query: 116 LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP 175
           L++LA    WFG GSRI++T+ ++ LL+ HG++  Y     + ++AL++    AFK   P
Sbjct: 306 LEALANETTWFGPGSRIVVTTENKELLQQHGINNTYHVGFPSDEDALKILCSYAFKQTSP 365

Query: 176 LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
                +LS  + +  G LPL L V+GS L G+  DEW   + RLE     +I D+L++ +
Sbjct: 366 RHGFEELSESVTKLCGKLPLGLCVVGSSLRGKKEDEWEDVVTRLETILDQDIEDVLRVGY 425

Query: 236 DGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-----NN 290
           + L E  + +FL IA FF   D D V             G+++L  + LI +      + 
Sbjct: 426 ESLDENAQTLFLHIAIFFNKEDGDLVKTMFAESDLDVKYGLKILENRSLIKMKIFSNGDT 485

Query: 291 TLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTEL-VEGIVLDNYHH 349
            + MH LLQ++G++ +Q+Q P E   R  L    E+CHVL  + GT   V G+  D    
Sbjct: 486 KIVMHRLLQQMGKRAIQKQEPWE---RQILIDAREICHVLEHAKGTGWNVHGMSFD-ISR 541

Query: 350 ENEVYLCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKF 401
            +EV +    KAF +M NL+ LK+          + +P  +++    LRLL W+ YP K 
Sbjct: 542 ISEVSI--RKKAFKRMPNLQFLKVYKSKDDGNNRMHVPEEMDF-PCLLRLLDWKAYPSKS 598

Query: 402 LPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLI 461
           LP     +  +E+ M  S++  LW+G + L  LK M LS S+NL ++PD + A NLE L 
Sbjct: 599 LPPTFNPEHLVELNMHSSQLEYLWQGTQPLKNLKKMDLSQSKNLKQLPDLSNATNLEYLY 658

Query: 462 LEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLP-- 513
           L GC  L EI  S+   +KL +L    C +L  +P  + ++SL+ +       L+++P  
Sbjct: 659 LMGCESLIEIPSSISHLHKLEMLATVGCINLEVIPAHMNLESLQTVYLGGCSRLRNIPVM 718

Query: 514 -----------TTISGLKC---LSTLDVSGDLKFREFPEIVEHM-EHLSELHLEGTAIRG 558
                      T + G+     L TLDVSG    R F  ++ H+   L+ L+L  T I  
Sbjct: 719 STNIRYLFITNTAVEGVPLCPGLKTLDVSGS---RNFKGLLTHLPTSLTTLNLCYTDIER 775

Query: 559 LPLSIELLSGLVLLNLKNCRSLEILP 584
           +P   + L  L  +NL+ CR L  LP
Sbjct: 776 IPDCFKSLHQLKGVNLRGCRRLASLP 801



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 157/348 (45%), Gaps = 54/348 (15%)

Query: 569 LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSI 627
           LV LN+ + + LE L      LK L+ + LS    LK+ P++  +  +L  L+L G  S+
Sbjct: 608 LVELNMHSSQ-LEYLWQGTQPLKNLKKMDLSQSKNLKQLPDLSNAT-NLEYLYLMGCESL 665

Query: 628 KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
            E+PSSI  L KLE+L    C NL  +P+ +  L+SL+T+ L GC +L N+P     I  
Sbjct: 666 IEIPSSISHLHKLEMLATVGCINLEVIPAHM-NLESLQTVYLGGCSRLRNIPVMSTNIRY 724

Query: 688 LEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPS 747
           L    I+ TAV         +P+        LK   +SG  + + L LT        LP+
Sbjct: 725 LF---ITNTAVEG-------VPL-----CPGLKTLDVSGSRNFKGL-LTH-------LPT 761

Query: 748 DIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGC 807
                 SL  L L       +P     L +L  + L  C+RL SLP+LP ++  +  + C
Sbjct: 762 ------SLTTLNLCYTDIERIPDCFKSLHQLKGVNLRGCRRLASLPELPRSLLTLVADDC 815

Query: 808 ASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLS-VVVPG 866
            SL T+   L   K+  +   C             F + RE   A+      +   V+PG
Sbjct: 816 ESLETVFCPLNTLKASFSFANC-------------FKLDREARRAIIQQSFFMGKAVLPG 862

Query: 867 SEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGN 914
            E+P  F ++ +G S+T+    N Y       +  C V  V +N + +
Sbjct: 863 REVPAVFDHRAKGYSLTIRPDGNPY-----TSFVFCVV--VSRNQKSD 903


>gi|74231152|gb|ABA00702.1| disease resistance protein [Phaseolus vulgaris]
          Length = 753

 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 217/620 (35%), Positives = 334/620 (53%), Gaps = 65/620 (10%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQ 75
           S DVR+IGICGMGG+GKTTI   +Y  ++ +F++S  + +V++   + G+ S++ + LS+
Sbjct: 198 SPDVRIIGICGMGGIGKTTICDQIYQKLALQFDSSSLVLDVQDKIQRDGIDSIRTKYLSE 257

Query: 76  LLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIIT 135
           LLK   +S    ++       RL+R KVLL++DDV D  QLQ L    + FG GSRII+T
Sbjct: 258 LLKEEKSSSSPYYN------ERLKRTKVLLILDDVTDSAQLQKLIRGSDSFGQGSRIIMT 311

Query: 136 SRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC-VQLSARIIRYAGGLP 194
           SRD  +L+  G D++Y+   LN D++ +LFN+ AFK     ++  + LS  ++ YA G+P
Sbjct: 312 SRDRQVLRNAGADDIYEVKELNLDDSQKLFNLHAFKQKSSAEKSYMDLSEEVLGYAEGIP 371

Query: 195 LALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFK 254
           LAL++LGS L GR+ + W S L++L+      I ++L++S+DGL+E EK IFLDIACF++
Sbjct: 372 LALQILGSLLYGRTREAWESELQKLKKGQHLGIFNVLKLSYDGLEEEEKNIFLDIACFYR 431

Query: 255 GNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEEL 314
           G++   V   L+  GF   IG+ +L ++ LI+V +  + MHDL+QE+G++IV+++ P+  
Sbjct: 432 GHNEIAVAERLDDFGFSSKIGMDILKDRGLISVIDGRIVMHDLIQEMGKEIVRKECPQHP 491

Query: 315 GKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKIC 374
           GKRSRL+  EE+C VL ++ G                           S   NL+  ++C
Sbjct: 492 GKRSRLFNAEEICEVLRKNEGVP-------------------------SNFQNLK--RLC 524

Query: 375 NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKL 434
           +L L +      + L +  +    +KFL       K + +  C S++  L +    L+ L
Sbjct: 525 HLDLSH-----CSSLTIFPFDLSHMKFL-------KQLSLRGC-SKLENLPQIQDTLEDL 571

Query: 435 KVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLIT 494
            V+IL  +              L++L L  C  L  I  S+    +L  L++  C+SL T
Sbjct: 572 VVLILDGTAIQALPSSLCRLVGLQELSLCSCLNLEIIPSSIGSLTRLCKLDLTHCSSLQT 631

Query: 495 LPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT 554
            P  I        NLK           L  LD+ G    R FPEI E       ++L  T
Sbjct: 632 FPSTI-------FNLK-----------LRNLDLCGCSSLRTFPEITEPAPTFDHINLICT 673

Query: 555 AIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSM 614
           A++ LP S   L  L  L L+ C  LE LP ++ NLK L  L  SGC++L + P  +  +
Sbjct: 674 AVKELPSSFANLVNLRSLELRKCTDLESLPNSIVNLKLLSKLDCSGCARLTEIPRDIGRL 733

Query: 615 KDLSELFLDGTSIKEVPSSI 634
             L EL L  + I  +P SI
Sbjct: 734 TSLMELSLCDSGIVNLPESI 753



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/243 (35%), Positives = 126/243 (51%), Gaps = 29/243 (11%)

Query: 558 GLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDL 617
           G+P + + L  L  L+L +C SL I P  +S++K L+ L L GCSKL+  P+I  +++DL
Sbjct: 512 GVPSNFQNLKRLCHLDLSHCSSLTIFPFDLSHMKFLKQLSLRGCSKLENLPQIQDTLEDL 571

Query: 618 SELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLEN 677
             L LDGT+I+ +PSS+  L  L+ L+L  C NL  +PSSI +L  L  L+L+ C  L+ 
Sbjct: 572 VVLILDGTAIQALPSSLCRLVGLQELSLCSCLNLEIIPSSIGSLTRLCKLDLTHCSSLQT 631

Query: 678 VPETLGQIESLEELDISGTA----VPHSTSWY-SYIPINLMRKSVALKLPSLSGLCSLRK 732
            P T+  ++ L  LD+ G +     P  T    ++  INL+  +V     S + L +LR 
Sbjct: 632 FPSTIFNLK-LRNLDLCGCSSLRTFPEITEPAPTFDHINLICTAVKELPSSFANLVNLRS 690

Query: 733 LNLTDCNLMEG-----------------------ALPSDIGNLCSLKELYLSKNSFVSLP 769
           L L  C  +E                         +P DIG L SL EL L  +  V+LP
Sbjct: 691 LELRKCTDLESLPNSIVNLKLLSKLDCSGCARLTEIPRDIGRLTSLMELSLCDSGIVNLP 750

Query: 770 TSI 772
            SI
Sbjct: 751 ESI 753



 Score =  112 bits (281), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/215 (35%), Positives = 109/215 (50%), Gaps = 25/215 (11%)

Query: 508 NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
           +L   P  +S +K L  L + G  K    P+I + +E L  L L+GTAI+ LP S+  L 
Sbjct: 533 SLTIFPFDLSHMKFLKQLSLRGCSKLENLPQIQDTLEDLVVLILDGTAIQALPSSLCRLV 592

Query: 568 G------------------------LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           G                        L  L+L +C SL+  P T+ NLK LR+L L GCS 
Sbjct: 593 GLQELSLCSCLNLEIIPSSIGSLTRLCKLDLTHCSSLQTFPSTIFNLK-LRNLDLCGCSS 651

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
           L+ FPEI         + L  T++KE+PSS   L  L  L L  C +L  LP+SI+ LK 
Sbjct: 652 LRTFPEITEPAPTFDHINLICTAVKELPSSFANLVNLRSLELRKCTDLESLPNSIVNLKL 711

Query: 664 LKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
           L  L+ SGC +L  +P  +G++ SL EL +  + +
Sbjct: 712 LSKLDCSGCARLTEIPRDIGRLTSLMELSLCDSGI 746



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 111/240 (46%), Gaps = 25/240 (10%)

Query: 578 RSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIEL 636
           R  E +P    NLK L  L LS CS L  FP  +  MK L +L L G S ++ +P   + 
Sbjct: 508 RKNEGVPSNFQNLKRLCHLDLSHCSSLTIFPFDLSHMKFLKQLSLRGCSKLENLPQIQDT 567

Query: 637 LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
           L  L +L L D   +  LPSS+  L  L+ L+L  C  LE +P ++G +  L +LD++  
Sbjct: 568 LEDLVVLIL-DGTAIQALPSSLCRLVGLQELSLCSCLNLEIIPSSIGSLTRLCKLDLT-- 624

Query: 697 AVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLK 756
              H +S  ++              PS      LR L+L  C+ +    P       +  
Sbjct: 625 ---HCSSLQTF--------------PSTIFNLKLRNLDLCGCSSLR-TFPEITEPAPTFD 666

Query: 757 ELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIR---QVRVNGCASLVTL 813
            + L   +   LP+S  +L  L ++EL  C  L+SLP    N++   ++  +GCA L  +
Sbjct: 667 HINLICTAVKELPSSFANLVNLRSLELRKCTDLESLPNSIVNLKLLSKLDCSGCARLTEI 726


>gi|39104607|dbj|BAC43641.2| putative disease resistance protein [Arabidopsis thaliana]
          Length = 1017

 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 205/626 (32%), Positives = 327/626 (52%), Gaps = 56/626 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-- 58
           +++   +++ L+D  + +V+++ I G  G+GKTTIAR +Y L+S  F+ S F+DN+R   
Sbjct: 190 IEAHLREIKSLLDLDNVEVKIVAIAGPAGIGKTTIARALYGLLSKRFQLSCFVDNLRGSY 249

Query: 59  ---ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQ 115
                  G  + LQ Q LS++L  +   I +    +  +   L  ++VL+++DDV  +KQ
Sbjct: 250 HSGFDEYGFKLHLQEQFLSKVLNQSGMRICH----LGAIKENLSDQRVLIILDDVNKLKQ 305

Query: 116 LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP 175
           L++LA    WFG GSRI++T+ ++ LL+ HG++  Y     + ++AL++    AFK   P
Sbjct: 306 LEALANGTTWFGPGSRIVVTTENKELLQQHGINNTYHVGFPSDEDALKILCSYAFKQTSP 365

Query: 176 LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
                +LS  + +  G LPL L V+GS L G+  DEW   + RLE     +I D+L++ +
Sbjct: 366 RHGFEELSESVTKLCGKLPLGLCVVGSSLRGKKEDEWEDVVTRLETILDQDIEDVLRVGY 425

Query: 236 DGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-----NN 290
           + L E  + +FL IA FF   D D V             G+++L  + LI +      + 
Sbjct: 426 ESLDENAQTLFLHIAIFFNKEDGDLVKTMFAESDLDVKYGLKILENRSLIKMKIFSNGDT 485

Query: 291 TLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTEL-VEGIVLDNYHH 349
            + MH LLQ++G++ +Q+Q P E   R  L    E+CHVL  + GT   V G+  D    
Sbjct: 486 KIVMHRLLQQMGKRAIQKQEPWE---RQILIDAREICHVLEHAKGTGWNVHGMSFD-ISR 541

Query: 350 ENEVYLCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKF 401
            +EV +    KAF +M NL+ LK+          + +P  +++    LRLL W+ YP K 
Sbjct: 542 ISEVSI--RKKAFKRMPNLQFLKVYKSKDDGNNRMHVPEEMDF-PCLLRLLDWKAYPSKS 598

Query: 402 LPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLI 461
           LP     +  +E+ M  S++  LW+G + L  LK M LS S+NL ++PD + A NLE L 
Sbjct: 599 LPPTFNPEHLVELNMHSSQLEYLWQGTQPLKNLKKMDLSQSKNLKQLPDLSNATNLEYLY 658

Query: 462 LEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLP-- 513
           L GC  L EI  S+   +KL +L    C +L  +P  + ++SL+ +       L+++P  
Sbjct: 659 LMGCESLIEIPSSISHLHKLEMLATVGCINLEVIPAHMNLESLQTVYLGGCSRLRNIPVM 718

Query: 514 -----------TTISGLKC---LSTLDVSGDLKFREFPEIVEHM-EHLSELHLEGTAIRG 558
                      T + G+     L TLDVSG    R F  ++ H+   L+ L+L  T I  
Sbjct: 719 STNIRYLFITNTAVEGVPLCPGLKTLDVSGS---RNFKGLLTHLPTSLTTLNLCYTDIER 775

Query: 559 LPLSIELLSGLVLLNLKNCRSLEILP 584
           +P   + L  L  +NL+ CR L  LP
Sbjct: 776 IPDCFKSLHQLKGVNLRGCRRLASLP 801



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 157/348 (45%), Gaps = 54/348 (15%)

Query: 569 LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSI 627
           LV LN+ + + LE L      LK L+ + LS    LK+ P++  +  +L  L+L G  S+
Sbjct: 608 LVELNMHSSQ-LEYLWQGTQPLKNLKKMDLSQSKNLKQLPDLSNAT-NLEYLYLMGCESL 665

Query: 628 KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
            E+PSSI  L KLE+L    C NL  +P+ +  L+SL+T+ L GC +L N+P     I  
Sbjct: 666 IEIPSSISHLHKLEMLATVGCINLEVIPAHM-NLESLQTVYLGGCSRLRNIPVMSTNIRY 724

Query: 688 LEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPS 747
           L    I+ TAV         +P+        LK   +SG  + + L LT        LP+
Sbjct: 725 LF---ITNTAVEG-------VPL-----CPGLKTLDVSGSRNFKGL-LTH-------LPT 761

Query: 748 DIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGC 807
                 SL  L L       +P     L +L  + L  C+RL SLP+LP ++  +  + C
Sbjct: 762 ------SLTTLNLCYTDIERIPDCFKSLHQLKGVNLRGCRRLASLPELPRSLLTLVADDC 815

Query: 808 ASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLS-VVVPG 866
            SL T+   L   K+  +   C             F + RE   A+      +   V+PG
Sbjct: 816 ESLETVFCPLNTLKASFSFANC-------------FKLDREARRAIIQQSFFMGKAVLPG 862

Query: 867 SEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGN 914
            E+P  F ++ +G S+T+    N Y       +  C V  V +N + +
Sbjct: 863 REVPAVFDHRAKGYSLTIRPDGNPY-----TSFVFCVV--VSRNQKSD 903


>gi|296081002|emb|CBI18506.3| unnamed protein product [Vitis vinifera]
          Length = 599

 Score =  294 bits (753), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 230/687 (33%), Positives = 317/687 (46%), Gaps = 167/687 (24%)

Query: 365  MTNLRLLKICNLQ----------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
            M  LRLLK+ N            L    E+ S  LR L W GYP   LPS    +  IE+
Sbjct: 1    MNRLRLLKVFNFSGIGKEGYKEPLSVSFEFPSYELRYLYWHGYPFGSLPSKFHSENLIEL 60

Query: 415  YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
             MCYS + ELWKG + LD L  + LS+S++LI +P+F+  PNLE+L+LEGCT   E+ PS
Sbjct: 61   NMCYSYMRELWKGNEVLDNLNTIELSNSQHLIHLPNFSSMPNLERLVLEGCTSFLEVDPS 120

Query: 475  LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFR 534
            + + NKLI LN+K+C                                          K R
Sbjct: 121  IEVLNKLIFLNLKNCK-----------------------------------------KLR 139

Query: 535  EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
             FP                 +I  LP SI  L+GL+LL+L+NC+ L+ LP ++  LK L 
Sbjct: 140  SFPR----------------SINELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLE 183

Query: 595  SLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRL 654
            +L LS CSKL+ FPEI+ +M+ L +L LDGT++K++  SIE L  L  LNL DCKNL  L
Sbjct: 184  TLILSACSKLESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATL 243

Query: 655  PSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMR 714
            P SI  LKSL+TL +SGC KL+ +PE LG ++ L +L   GT V    S           
Sbjct: 244  PCSIGNLKSLETLIVSGCSKLQQLPENLGSLQCLVKLQADGTLVRQPPS----------- 292

Query: 715  KSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITH 774
             S+ L          LR L +                           N+F SLP  I+ 
Sbjct: 293  -SIVL----------LRNLEIL--------------------------NNFFSLPAGISK 315

Query: 775  LSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDS-------TMI 827
            LSKL  + L  CK L  +P+LP +I +V    C+SL T+L    +C +         T+ 
Sbjct: 316  LSKLRFLSLNHCKSLLQIPELPSSIIEVNAQYCSSLNTILTPSSVCNNQPVCRWLVFTLP 375

Query: 828  AC--LDSLKLLGNKSLAFS--MLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSIT 883
             C  LD+     N     S  M   +L          S+ +PGSEIP+W   QN GS +T
Sbjct: 376  NCFNLDAENPCSNDMAIISPRMQINFLPDFG-----FSIFLPGSEIPDWISNQNLGSEVT 430

Query: 884  VTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCH----------IGHGI 933
            +  P + + +   +G+A+CCVF   ++   N C     + QL C           IGH +
Sbjct: 431  IELPPHWF-ESNFLGFAVCCVF-AFEDIAPNGC-----SSQLLCQLQSDESHFRGIGHIL 483

Query: 934  YGIGFR-DKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGL- 991
            + I    +   +  S H+WL Y  R      RL +     P    H   SF      G  
Sbjct: 484  HSIDCEGNSEDRLKSHHMWLAYKPRG-----RLRISYGDCPNRWRHAKASF------GFI 532

Query: 992  ------EVKMCGLHPVYMDEVEELDQT 1012
                   V+ CG+H +Y  + EE + T
Sbjct: 533  SCCPSNMVRKCGIHLIYAQDHEERNST 559


>gi|42562922|ref|NP_176590.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196067|gb|AEE34188.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 997

 Score =  294 bits (752), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 226/684 (33%), Positives = 347/684 (50%), Gaps = 41/684 (5%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-- 58
           +++   K++ L+D  + +V+M+ I G  G+GK+TI R ++ L+S+ F  + F+DN+R   
Sbjct: 190 IEAHLRKIQSLLDLDNDEVKMVAISGPAGIGKSTIGRALHSLLSNRFHHTCFVDNLRGSH 249

Query: 59  ---ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQ 115
              +   G  + LQ QLLS++L    + I +    +  +  RL   KV +++DDV DVKQ
Sbjct: 250 PIGLDEYGLKLRLQEQLLSKILNQDGSRICH----LGAIKERLCDMKVFIILDDVNDVKQ 305

Query: 116 LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP 175
           L++LA    WFG GSRII+T+ ++ LLK HG++  Y     + +EA+++    AF+    
Sbjct: 306 LEALANESNWFGPGSRIIVTTENKELLKQHGINNTYYVGFPSDEEAIKILCRYAFRQSSS 365

Query: 176 LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
                +L+  +    G LPL L V+GS L G++ +EW   + RLE     +I  +L++ +
Sbjct: 366 RHGFKKLTRSVTELCGKLPLGLRVVGSSLHGKNEEEWEYVIRRLETIIDRDIEQVLRVGY 425

Query: 236 DGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWM 294
           + L E E+ +FL IA FF   D D V   L          + +L+ K LI +  +  + M
Sbjct: 426 ESLHENEQSLFLHIAIFFNYEDGDLVKAMLAENDLDIEHELNILVNKSLIYISTDGRIRM 485

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           H LLQ +G+Q  QR+ P    KR  L   +E+CHVL    GT  V GI+ D     NEV 
Sbjct: 486 HKLLQLVGRQANQREEP---WKRRILIDAQEICHVLENDIGTGAVSGILFDT-SGINEVS 541

Query: 355 LCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNL 406
           +  S KA  +M NLR L +          + +P  +E+   RLRLL W  YP K LP   
Sbjct: 542 I--SNKALRRMCNLRFLSVYKTKHDGYNRMDIPEDMEF-PPRLRLLHWDAYPSKCLPLKF 598

Query: 407 QMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
           + +  +E+ M  SR+  LW G + L KLK + L  S NL  +PD + A NLE L L  C 
Sbjct: 599 RAENLVELDMKDSRLEYLWPGTQLLTKLKKLNLEGSYNLKELPDLSNATNLEMLDLSVCL 658

Query: 467 RLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLPTTISGLK 520
            L E+  S+   +KL ++ M  C SL  +P  I + SLE +       LK+ P   + +K
Sbjct: 659 ALAELPSSIKNLHKLDVIYMDLCESLHMIPTNINLASLETMYMTGCPQLKTFPAFSTKIK 718

Query: 521 CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL 580
            L  +         E P  + H   L ++ L G+  R L     L S L  L+L +    
Sbjct: 719 RLYLVRTG----VEEVPASITHCSRLLKIDLSGS--RNLKSITHLPSSLQTLDLSSTDIE 772

Query: 581 EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
            I    + +L+ L  L+L  C KLK  PE+  S++ L+    D  S++ V  +  L T  
Sbjct: 773 MIADSCIKDLQRLDHLRLCRCRKLKSLPELPASLRLLTA--EDCESLERV--TYPLNTPT 828

Query: 641 ELLNLSDCKNLVRLPSSIIALKSL 664
             LN ++C  L      +I  +SL
Sbjct: 829 GQLNFTNCLKLGEEAQRVIIQQSL 852



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 151/357 (42%), Gaps = 55/357 (15%)

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
           + PE +E    L  LH +    + LPL       LV L++K+ R LE L      L  L+
Sbjct: 570 DIPEDMEFPPRLRLLHWDAYPSKCLPLKFRA-ENLVELDMKDSR-LEYLWPGTQLLTKLK 627

Query: 595 SLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRL 654
            L L G   LK+ P++  +                        T LE+L+LS C  L  L
Sbjct: 628 KLNLEGSYNLKELPDLSNA------------------------TNLEMLDLSVCLALAEL 663

Query: 655 PSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIP----I 710
           PSSI  L  L  + +  C  L  +P  +  + SLE + ++G   P   ++ ++      +
Sbjct: 664 PSSIKNLHKLDVIYMDLCESLHMIPTNIN-LASLETMYMTG--CPQLKTFPAFSTKIKRL 720

Query: 711 NLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGA--LPSDIGNLCSLKELYLSKNSFVSL 768
            L+R  V     S++    L K++L+    ++    LPS      SL+ L LS      +
Sbjct: 721 YLVRTGVEEVPASITHCSRLLKIDLSGSRNLKSITHLPS------SLQTLDLSSTDIEMI 774

Query: 769 PTS-ITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMI 827
             S I  L +L ++ L  C++L+SLP+LP ++R +    C SL  +   L          
Sbjct: 775 ADSCIKDLQRLDHLRLCRCRKLKSLPELPASLRLLTAEDCESLERVTYPLNTPTGQLNFT 834

Query: 828 ACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
            CL     LG ++    + +  ++             PGS +P  F ++  G+S+ +
Sbjct: 835 NCLK----LGEEAQRVIIQQSLVK---------HACFPGSVMPSEFNHRARGNSLKI 878


>gi|357468491|ref|XP_003604530.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355505585|gb|AES86727.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 950

 Score =  294 bits (752), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 243/700 (34%), Positives = 371/700 (53%), Gaps = 56/700 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-I 59
           +D     L  L+   S  VR+IGI GMGG+GKTTIA  ++     +++   FL+ V E +
Sbjct: 36  IDKPIADLNSLLKKESEQVRVIGIWGMGGIGKTTIAEEIFSQNRSDYDGCCFLEKVSERL 95

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            + GG+        S L +L   S+  +  GI+    R+ R KVL+V+DDV +   L+ L
Sbjct: 96  KAHGGI---GSLKESLLSELLKESVKELSSGIE---RRIGRMKVLIVLDDVNETDLLEML 149

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVD--EVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
            G+ +WF   SRII+TSR++ +L T+ VD  ++ +   L+  EAL+LFN+ AFK      
Sbjct: 150 FGSLDWFRLDSRIIVTSRNKQVLVTNEVDNDDLCEVRVLDSSEALELFNLNAFKQSHLEM 209

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
           E  +LS R+I YA G+PL L+VL   L G+  + W S L++L+  P  ++ D++++S+D 
Sbjct: 210 EYYELSERVIEYAKGVPLVLKVLAHMLRGKCKEVWESKLDKLKRLPIPKVHDVMRLSYDD 269

Query: 238 LQELEKKIFLDIACFFKGND--RDYVTNFLEGCGFHPVI--GIRVLIEKCLITV-HNNTL 292
           L  LE+K FLDIACFF G D   DY+ + L+ C     +  G+  L +K LIT+  +N +
Sbjct: 270 LDRLEQKYFLDIACFFNGLDLELDYMKHLLKDCDSDNYVAGGLETLKDKALITISEDNVI 329

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            MHD+LQE+G ++V RQ   +LGK SRLW  +++  VL    G++ +  I +D   +   
Sbjct: 330 SMHDILQEMGWEVV-RQESSDLGKCSRLWDVDDIFDVLKNDKGSDAIRSIRVDFLENRK- 387

Query: 353 VYLCASAKAFSKMTNLRLLKIC-----NLQL-PNGLEYLSNRLRLLGWRGYPLKFLPSNL 406
             L  S   F KMTNL+ L         L L P GLE     LR L W  YPLK  P   
Sbjct: 388 --LKLSPHVFDKMTNLQFLNFWVDFDDYLDLFPQGLESFPTGLRYLHWVCYPLKSFPEKF 445

Query: 407 QMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
             +  + + +  SR+ +LW G+++L  LK + +S + +L  +PDF+ A NL+ L +  C 
Sbjct: 446 SAENLVILDLYLSRMEKLWCGVQNLVNLKEVTISLA-SLKELPDFSKATNLKVLTVTVCP 504

Query: 467 RLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLD 526
            L  +HPS+    KL+ L++  C SL T      + S           ++SG + LS   
Sbjct: 505 NLESVHPSIFTLEKLVRLDLGGCRSLTTFTSNSNLSS-------LHYLSLSGCEKLSEFS 557

Query: 527 VSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVT 586
           V+              +E++ EL L    I  LP S    S L  L LK  + +E +P +
Sbjct: 558 VT--------------LENIVELDLSWCPINALPSSFGCQSNLETLVLKATQ-IESIPSS 602

Query: 587 VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLS 646
           + +L  LR L + GC KL   PE+  S++ L    L   +I+ +PSSI+ LT+L  L++ 
Sbjct: 603 IKDLTRLRKLNICGCKKLLALPELPLSVEILD---LRSCNIEIIPSSIKNLTRLRKLDIR 659

Query: 647 DCKNLVRLPSSIIALKSLKTLNLSGCFKLENV--PETLGQ 684
               L+ LP     L S   + L  C  L++V  P T+ +
Sbjct: 660 FSNKLLALPE----LSSSVEILLVHCDSLKSVLFPSTVAE 695



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 158/358 (44%), Gaps = 62/358 (17%)

Query: 602 SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
           S+++K    V+++ +L E+ +   S+KE+P      T L++L ++ C NL  +  SI  L
Sbjct: 458 SRMEKLWCGVQNLVNLKEVTISLASLKELPD-FSKATNLKVLTVTVCPNLESVHPSIFTL 516

Query: 662 KSLKTLNLSGCFKL--------------------ENVPETLGQIESLEELDISG---TAV 698
           + L  L+L GC  L                    E + E    +E++ ELD+S     A+
Sbjct: 517 EKLVRLDLGGCRSLTTFTSNSNLSSLHYLSLSGCEKLSEFSVTLENIVELDLSWCPINAL 576

Query: 699 PHSTSWYSYIPINLMRKSVALKLPS-LSGLCSLRKLNLTDCN--LMEGALPSDIGNLCSL 755
           P S    S +   +++ +    +PS +  L  LRKLN+  C   L    LP       S+
Sbjct: 577 PSSFGCQSNLETLVLKATQIESIPSSIKDLTRLRKLNICGCKKLLALPELP------LSV 630

Query: 756 KELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLL- 814
           + L L   +   +P+SI +L++L  +++    +L +LP+L  ++  + V+ C SL ++L 
Sbjct: 631 EILDLRSCNIEIIPSSIKNLTRLRKLDIRFSNKLLALPELSSSVEILLVH-CDSLKSVLF 689

Query: 815 -----DALKLCKSDSTMIACLD---------------SLKLLGNKSLAFSMLREYLEAVS 854
                +  K  K +     CL+               +L     + L+     +Y+E   
Sbjct: 690 PSTVAEQFKENKKEVKFWNCLNLDERSLINIGLNLQINLMKFAYQDLSTVEHDDYVETYV 749

Query: 855 NTRQHLS-----VVVPGSEIPEWFMYQ--NEGSSITVTRPSNLYNKKKLVGYAICCVF 905
           + + +        V  GS +P+WF Y+  NE ++  +    +  +   L+G+  C + 
Sbjct: 750 DYKDNFDSYQALYVYSGSSVPDWFEYKTTNETTNDDMIVDLSPLHLSPLLGFVFCFIL 807



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 109/209 (52%), Gaps = 7/209 (3%)

Query: 601 CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           C  LK FPE   S ++L  L L  + ++++   ++ L  L+ + +S   +L  LP    A
Sbjct: 435 CYPLKSFPEKF-SAENLVILDLYLSRMEKLWCGVQNLVNLKEVTIS-LASLKELPDFSKA 492

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISG-TAVPHSTSWYSYIPINLMRKSVAL 719
             +LK L ++ C  LE+V  ++  +E L  LD+ G  ++   TS  +   ++ +  S   
Sbjct: 493 -TNLKVLTVTVCPNLESVHPSIFTLEKLVRLDLGGCRSLTTFTSNSNLSSLHYLSLSGCE 551

Query: 720 KLPSLS-GLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
           KL   S  L ++ +L+L+ C +   ALPS  G   +L+ L L      S+P+SI  L++L
Sbjct: 552 KLSEFSVTLENIVELDLSWCPI--NALPSSFGCQSNLETLVLKATQIESIPSSIKDLTRL 609

Query: 779 LNIELEDCKRLQSLPQLPPNIRQVRVNGC 807
             + +  CK+L +LP+LP ++  + +  C
Sbjct: 610 RKLNICGCKKLLALPELPLSVEILDLRSC 638


>gi|2245043|emb|CAB10461.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268437|emb|CAB80957.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 1256

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 262/874 (29%), Positives = 423/874 (48%), Gaps = 112/874 (12%)

Query: 21   MIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS--KGGLVSLQRQLLSQLLK 78
            M+GI G  G+GK+TI R ++  +S +F    F+       S   G  +S +++LLS++L 
Sbjct: 209  MVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGSDVSGMKLSWEKELLSEILG 268

Query: 79   LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
              D  I    D   ++  RL+ KKVL+++DDV +++ L++L G  EWFGSGSRII+ ++D
Sbjct: 269  QKDIKI----DHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGSRIIVITQD 324

Query: 139  EHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALE 198
            + LLK H +D VY+    +   AL++ +  AF    P  +  +L+  +    G LPL L 
Sbjct: 325  KQLLKAHEIDLVYEVELPSQGLALKMISQYAFGKDSPPDDFKELAFEVAELVGSLPLGLS 384

Query: 199  VLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDR 258
            VLGS L GR  DEW   + RL  +   +I + L++ +D L +  +++F  IACFF G   
Sbjct: 385  VLGSSLKGRDKDEWVKMMPRLRNDSDDKIEETLRVGYDRLNKKNRELFKCIACFFNGFKV 444

Query: 259  DYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPEELGKR 317
              V   LE       +G+ +L +K LI +  +  + MH+LL++LG++I + +S     KR
Sbjct: 445  SNVKELLED-----DVGLTMLADKSLIRITPDGDIEMHNLLEKLGREIDRAKSKGNPAKR 499

Query: 318  SRLWKEEEVCHVLTESTGTELVEGI-VLDNYHHENEVYLCASAKAFSKMTNLRLLKI--- 373
              L   E++  V+TE TGTE V GI V           L  + ++F  M NL+ L+I   
Sbjct: 500  QFLTNFEDIQEVVTEKTGTETVLGIRVPPTVLFSTRPLLVINEESFKGMRNLQYLEIGHW 559

Query: 374  CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDK 433
              + LP GL YL  +L+LL W   PLK LPS  + +  + + M YS++ +LW+G   L  
Sbjct: 560  SEIDLPQGLVYLPLKLKLLKWNYCPLKSLPSTFKAEYLVNLIMKYSKLEKLWEGTLPLGS 619

Query: 434  LKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIIL--------- 484
            LK M L  S NL  +PD + A NLE+L L  C  L  +  S+    KL  L         
Sbjct: 620  LKKMDLGCSNNLKEIPDLSLAINLEELNLSKCESLVTLPSSIQNAIKLRTLYCSGVLLID 679

Query: 485  ------------------NMKDCTSLITLPGKILMKSLEKLNLKSLPTTISG-------- 518
                              +M+    LI LP K+     +   +K LP+            
Sbjct: 680  LKSLEGMCNLEYLSVDWSSMEGTQGLIYLPRKLKRLWWDYCPVKRLPSNFKAEYLVELRM 739

Query: 519  --------------LKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSI 563
                          L  L  + + G    +E P++   + +L  L+L G  ++  LP SI
Sbjct: 740  ENSDLEKLWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAI-NLERLYLFGCESLVTLPSSI 798

Query: 564  ELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI------VRSMKDL 617
            +  + L+ L++++C+ LE  P  + NL+ L  L L+GC  L+ FP I         ++D 
Sbjct: 799  QNATKLINLDMRDCKKLESFPTDL-NLESLEYLNLTGCPNLRNFPAIKMGCSYFEILQDR 857

Query: 618  SELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
            +E+ + D    K +P+ ++ L         DC  L+R        + L  L++SGC K E
Sbjct: 858  NEIEVEDCFWNKNLPAGLDYL---------DC--LMRCMPCEFRPEYLTFLDVSGC-KHE 905

Query: 677  NVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLT 736
             + E +  + SL+ +D+S +              NL       ++P LS   +L++L L 
Sbjct: 906  KLWEGIQSLGSLKRMDLSESE-------------NLT------EIPDLSKATNLKRLYLN 946

Query: 737  DCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP 796
             C  +   LPS IGNL  L  L + + + + L  +  +LS L+ ++L  C  L++ P + 
Sbjct: 947  GCKSLV-TLPSTIGNLHRLVRLEMKECTGLELLPTDVNLSSLIILDLSGCSSLRTFPLIS 1005

Query: 797  PNIRQVRVNGCASLVTLLDALKLCKSDSTMIACL 830
              I  + +   A     ++ +  C  D T ++ L
Sbjct: 1006 TRIECLYLENTA-----IEEVPCCIEDLTRLSVL 1034



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 182/416 (43%), Gaps = 89/416 (21%)

Query: 360  KAFSKMTNLRLLKI--CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
            K+   M NL  L +   +++   GL YL  +L+ L W   P+K LPSN + +  +E+ M 
Sbjct: 681  KSLEGMCNLEYLSVDWSSMEGTQGLIYLPRKLKRLWWDYCPVKRLPSNFKAEYLVELRME 740

Query: 418  YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
             S + +LW G + L  LK M L  S+ L  +PD + A NLE+L L GC  L  +  S+  
Sbjct: 741  NSDLEKLWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAINLERLYLFGCESLVTLPSSIQN 800

Query: 478  HNKLI-----------------------ILNMKDCTSLITLP----GKILMKSLEKLNL- 509
              KLI                        LN+  C +L   P    G    + L+  N  
Sbjct: 801  ATKLINLDMRDCKKLESFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSYFEILQDRNEI 860

Query: 510  --------KSLPTTISGLKCL-------------STLDVSG------------------- 529
                    K+LP  +  L CL             + LDVSG                   
Sbjct: 861  EVEDCFWNKNLPAGLDYLDCLMRCMPCEFRPEYLTFLDVSGCKHEKLWEGIQSLGSLKRM 920

Query: 530  DL----KFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
            DL       E P++ +   +L  L+L G  ++  LP +I  L  LV L +K C  LE+LP
Sbjct: 921  DLSESENLTEIPDLSKAT-NLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLP 979

Query: 585  VTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLN 644
              V NL  L  L LSGCS L+ FP I   ++ L   +L+ T+I+EVP  IE LT+L +L 
Sbjct: 980  TDV-NLSSLIILDLSGCSSLRTFPLISTRIECL---YLENTAIEEVPCCIEDLTRLSVLL 1035

Query: 645  LSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
            +  C+ L  +  +I  L SL   + + C          G I++L +  +  T   H
Sbjct: 1036 MYCCQRLKNISPNIFRLTSLMVADFTDC---------RGVIKALSDATVVATMEDH 1082


>gi|357452803|ref|XP_003596678.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago
           truncatula]
 gi|355485726|gb|AES66929.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago
           truncatula]
          Length = 861

 Score =  293 bits (751), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 202/557 (36%), Positives = 292/557 (52%), Gaps = 63/557 (11%)

Query: 18  DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLL 77
           D R++GI GMGG+GKTT A V+YD IS++F+A  F+ N  +I   GG+ ++Q+Q+L Q L
Sbjct: 175 DFRVLGIWGMGGVGKTTHATVLYDRISYQFDARCFIHNTSKIYMDGGIAAVQKQILRQAL 234

Query: 78  KLADNSIWNVFDGIDMLGSRLQR----KKVLLVIDDVVDVKQLQSLAGNREWFGSGSRII 133
              D    +  D  ++ G  + R     KVL+V+D++  ++QL               II
Sbjct: 235 ---DERNLDSHDACEIAGIMVNRLHSGIKVLVVLDNINQLEQL---------------II 276

Query: 134 ITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGL 193
           ITSRDEH+L+ +G D V++   LN ++A +LF+  AFK      + ++L   +++YA  L
Sbjct: 277 ITSRDEHILRVYGADTVHEVPLLNSNDAYELFHRNAFKGEDQSYDFIELIPEVLKYAQHL 336

Query: 194 PLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFF 253
           PLA+ V+ SFL  R    W   L+RL   P S+I+D+LQ+S DGLQ  EK+IFL IACFF
Sbjct: 337 PLAIRVVASFLCTRDATLWIDALDRLRNNPDSKIMDVLQMSVDGLQHEEKEIFLHIACFF 396

Query: 254 KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEE 313
           KG   DYV   L+ CG +P IGI+ ++EK LIT+ N  + MHD+LQELG++IV+ Q PEE
Sbjct: 397 KGEREDYVKRILDACGLYPQIGIQRILEKSLITIKNEEIHMHDMLQELGKKIVRHQFPEE 456

Query: 314 LGKRSRLWKEEEVCHVLTESTGTELVEGI-VLDNYHHENEVYLCASAKAF--SKMTNLRL 370
            G  SRLW+  +  HVL   TGT  V+ +  L      N  YL  + K F   K+  L  
Sbjct: 457 PGSWSRLWRCNDFYHVLMTKTGTNNVKDLPYLKRMDLSNSKYLIETPKFFWTPKLERLDF 516

Query: 371 LKICNL-QLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIK 429
               NL  + + + +L+            L FL           +  C S +   +  + 
Sbjct: 517 TGCTNLIHVHSSIGHLTE-----------LVFL----------SLQNCSSLVDLDFGSVS 555

Query: 430 HLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDC 489
           +L   +V+ L     L +MPDFTG        L  CT L  I  S+     L+ L+   C
Sbjct: 556 NLSSFQVLRLCGCTKLEKMPDFTGLK-----FLRNCTNLIVIPDSVNRMISLVTLDFYGC 610

Query: 490 TSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSEL 549
             L TL  K         NL  +P  I  L+CL  +++ G+ KF   P     ++ LS +
Sbjct: 611 LKLTTLHHKGF------CNLHEVPDAIGELRCLERVNLQGN-KFDALPNDFYDLKSLSYI 663

Query: 550 HL----EGTAIRGLPLS 562
           +L    E   IR  PLS
Sbjct: 664 NLSHCHELQTIRQWPLS 680



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 167/414 (40%), Gaps = 80/414 (19%)

Query: 586 TVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNL 645
            V +L  L+ + LS    L + P+   + K     F   T++  V SSI  LT+L  L+L
Sbjct: 481 NVKDLPYLKRMDLSNSKYLIETPKFFWTPKLERLDFTGCTNLIHVHSSIGHLTELVFLSL 540

Query: 646 SDCKNLVRLP-SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSW 704
            +C +LV L   S+  L S + L L GC KLE +P            D +G     + + 
Sbjct: 541 QNCSSLVDLDFGSVSNLSSFQVLRLCGCTKLEKMP------------DFTGLKFLRNCTN 588

Query: 705 YSYIP--INLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK 762
              IP  +N M   V L       L +L       CNL E  +P  IG L  L+ + L  
Sbjct: 589 LIVIPDSVNRMISLVTLDFYGCLKLTTLHHKGF--CNLHE--VPDAIGELRCLERVNLQG 644

Query: 763 NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP--PNI----RQVRVNGCA---SLVTL 813
           N F +LP     L  L  I L  C  LQ++ Q P  P+     R  ++ G +   S + +
Sbjct: 645 NKFDALPNDFYDLKSLSYINLSHCHELQTIRQWPLSPSASSKGRDFKMAGGSRHRSGLYI 704

Query: 814 LDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSE----- 868
            D  K  K                 KS+ ++ LR  L+   + R+   +VVP        
Sbjct: 705 FDCPKFTK-----------------KSIEYTWLRRLLQNTHHFRRSFDIVVPWDWKNIDF 747

Query: 869 -----IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSY--P 921
                IPEWF +Q +G +I     S +    K  G+A    F V      NNC  +   P
Sbjct: 748 PSSCCIPEWFNHQFDGGAIVRIVDSAV--DVKWFGFAFSVAFEV------NNCPANSGSP 799

Query: 922 THQLNCHIGHGIYGIGFRDKFGQA--------------GSDHLWLLYLSRQTCY 961
               +  + H  Y + F  +  +               GS HLWL+Y+ +Q C+
Sbjct: 800 QDSFSSALPHPFY-LSFESEHTEERFDMPLSLELNKIDGSKHLWLIYIFQQHCH 852



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 40/217 (18%)

Query: 427 GIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNM 486
            +K L  LK M LS+S+ LI  P F   P LE+L   GCT L  +H S+    +L+ L++
Sbjct: 481 NVKDLPYLKRMDLSNSKYLIETPKFFWTPKLERLDFTGCTNLIHVHSSIGHLTELVFLSL 540

Query: 487 KDCTSLITLP-GKILMKS------------LEKL-------------NLKSLPTTISGLK 520
           ++C+SL+ L  G +   S            LEK+             NL  +P +++ + 
Sbjct: 541 QNCSSLVDLDFGSVSNLSSFQVLRLCGCTKLEKMPDFTGLKFLRNCTNLIVIPDSVNRMI 600

Query: 521 CLSTLDVSGDLKF-----------REFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGL 569
            L TLD  G LK             E P+ +  +  L  ++L+G     LP     L  L
Sbjct: 601 SLVTLDFYGCLKLTTLHHKGFCNLHEVPDAIGELRCLERVNLQGNKFDALPNDFYDLKSL 660

Query: 570 VLLNLKNCRSLEIL---PVTVSNLKCLRSLKLSGCSK 603
             +NL +C  L+ +   P++ S     R  K++G S+
Sbjct: 661 SYINLSHCHELQTIRQWPLSPSASSKGRDFKMAGGSR 697


>gi|20270890|gb|AAM18462.1|AF440696_1 disease resistance protein RPP4 [Arabidopsis thaliana]
          Length = 1135

 Score =  293 bits (751), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 262/874 (29%), Positives = 423/874 (48%), Gaps = 112/874 (12%)

Query: 21   MIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS--KGGLVSLQRQLLSQLLK 78
            M+GI G  G+GK+TI R ++  +S +F    F+       S   G  +S +++LLS++L 
Sbjct: 209  MVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGSDVSGMKLSWEKELLSEILG 268

Query: 79   LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
              D  I    D   ++  RL+ KKVL+++DDV +++ L++L G  EWFGSGSRII+ ++D
Sbjct: 269  QKDIKI----DHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGSRIIVITQD 324

Query: 139  EHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALE 198
            + LLK H +D VY+    +   AL++ +  AF    P  +  +L+  +    G LPL L 
Sbjct: 325  KQLLKAHEIDLVYEVELPSQGLALKMISQYAFGKDSPPDDFKELAFEVAELVGSLPLGLS 384

Query: 199  VLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDR 258
            VLGS L GR  DEW   + RL  +   +I + L++ +D L +  +++F  IACFF G   
Sbjct: 385  VLGSSLKGRDKDEWVKMMPRLRNDSDDKIEETLRVGYDRLNKKNRELFKCIACFFNGFKV 444

Query: 259  DYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPEELGKR 317
              V   LE       +G+ +L +K LI +  +  + MH+LL++LG++I + +S     KR
Sbjct: 445  SNVKELLED-----DVGLTMLADKSLIRITPDGDIEMHNLLEKLGREIDRAKSKGNPAKR 499

Query: 318  SRLWKEEEVCHVLTESTGTELVEGI-VLDNYHHENEVYLCASAKAFSKMTNLRLLKI--- 373
              L   E++  V+TE TGTE V GI V           L  + ++F  M NL+ L+I   
Sbjct: 500  QFLTNFEDIQEVVTEKTGTETVLGIRVPPTVLFSTRPLLVINEESFKGMRNLQYLEIGHW 559

Query: 374  CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDK 433
              + LP GL YL  +L+LL W   PLK LPS  + +  + + M YS++ +LW+G   L  
Sbjct: 560  SEIDLPQGLVYLPLKLKLLKWNYCPLKSLPSTFKAEYLVNLIMKYSKLEKLWEGTLPLGS 619

Query: 434  LKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIIL--------- 484
            LK M L  S NL  +PD + A NLE+L L  C  L  +  S+    KL  L         
Sbjct: 620  LKKMDLGCSNNLKEIPDLSLAINLEELNLSKCESLVTLPSSIQNAIKLRTLYCSGVLLID 679

Query: 485  ------------------NMKDCTSLITLPGKILMKSLEKLNLKSLPTTISG-------- 518
                              +M+    LI LP K+     +   +K LP+            
Sbjct: 680  LKSLEGMCNLEYLSVDWSSMEGTQGLIYLPRKLKRLWWDYCPVKRLPSNFKAEYLVELRM 739

Query: 519  --------------LKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLSI 563
                          L  L  + + G    +E P++   + +L  L+L G  ++  LP SI
Sbjct: 740  ENSDLEKLWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAI-NLERLYLFGCESLVTLPSSI 798

Query: 564  ELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI------VRSMKDL 617
            +  + L+ L++++C+ LE  P  + NL+ L  L L+GC  L+ FP I         ++D 
Sbjct: 799  QNATKLINLDMRDCKKLESFPTDL-NLESLEYLNLTGCPNLRNFPAIKMGCSYFEILQDR 857

Query: 618  SELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
            +E+ + D    K +P+ ++ L         DC  L+R        + L  L++SGC K E
Sbjct: 858  NEIEVEDCFWNKNLPAGLDYL---------DC--LMRCMPCEFRPEYLTFLDVSGC-KHE 905

Query: 677  NVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLT 736
             + E +  + SL+ +D+S +              NL       ++P LS   +L++L L 
Sbjct: 906  KLWEGIQSLGSLKRMDLSESE-------------NLT------EIPDLSKATNLKRLYLN 946

Query: 737  DCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP 796
             C  +   LPS IGNL  L  L + + + + L  +  +LS L+ ++L  C  L++ P + 
Sbjct: 947  GCKSLV-TLPSTIGNLHRLVRLEMKECTGLELLPTDVNLSSLIILDLSGCSSLRTFPLIS 1005

Query: 797  PNIRQVRVNGCASLVTLLDALKLCKSDSTMIACL 830
              I  + +   A     ++ +  C  D T ++ L
Sbjct: 1006 TRIECLYLENTA-----IEEVPCCIEDLTRLSVL 1034



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 181/416 (43%), Gaps = 89/416 (21%)

Query: 360  KAFSKMTNLRLLKI--CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
            K+   M NL  L +   +++   GL YL  +L+ L W   P+K LPSN + +  +E+ M 
Sbjct: 681  KSLEGMCNLEYLSVDWSSMEGTQGLIYLPRKLKRLWWDYCPVKRLPSNFKAEYLVELRME 740

Query: 418  YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
             S + +LW G + L  LK M L  S+ L  +PD + A NLE+L L GC  L  +  S+  
Sbjct: 741  NSDLEKLWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAINLERLYLFGCESLVTLPSSIQN 800

Query: 478  HNKLI-----------------------ILNMKDCTSLITLP----GKILMKSLEKLNL- 509
              KLI                        LN+  C +L   P    G    + L+  N  
Sbjct: 801  ATKLINLDMRDCKKLESFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSYFEILQDRNEI 860

Query: 510  --------KSLPTTISGLKCL-------------STLDVSG------------------- 529
                    K+LP  +  L CL             + LDVSG                   
Sbjct: 861  EVEDCFWNKNLPAGLDYLDCLMRCMPCEFRPEYLTFLDVSGCKHEKLWEGIQSLGSLKRM 920

Query: 530  DL----KFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
            DL       E P++     +L  L+L G  ++  LP +I  L  LV L +K C  LE+LP
Sbjct: 921  DLSESENLTEIPDL-SKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLP 979

Query: 585  VTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLN 644
              V NL  L  L LSGCS L+ FP I   ++ L   +L+ T+I+EVP  IE LT+L +L 
Sbjct: 980  TDV-NLSSLIILDLSGCSSLRTFPLISTRIECL---YLENTAIEEVPCCIEDLTRLSVLL 1035

Query: 645  LSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
            +  C+ L  +  +I  L SL   + + C          G I++L +  +  T   H
Sbjct: 1036 MYCCQRLKNISPNIFRLTSLMVADFTDC---------RGVIKALSDATVVATMEDH 1082


>gi|359489070|ref|XP_003633868.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 544

 Score =  293 bits (750), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 150/325 (46%), Positives = 222/325 (68%), Gaps = 9/325 (2%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D R ++L+ L++S   DVR++GI G GG+GKTTIA++VY+ I  EF  + FL+NV+E  
Sbjct: 198 IDFRLKELKSLINSQLHDVRVVGIYGTGGIGKTTIAKIVYNEIQCEFNGASFLENVKESF 257

Query: 61  SKG----GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQL 116
           +KG        L + +  Q ++L+     N+ DGI+M+ + L  KKVL+V DDV   +QL
Sbjct: 258 NKGCQLQLQQKLLQGIAGQKIELS-----NIDDGINMIKNTLGSKKVLIVTDDVDRREQL 312

Query: 117 QSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
           +SL G+R WFG+G+ II+T+RD+ LL+ +GVD  Y+   L+  EA++LFN  AFK   P 
Sbjct: 313 ESLVGSRNWFGAGTTIIVTTRDQLLLRYYGVDVTYEVKKLDNVEAIELFNKHAFKQNAPK 372

Query: 177 QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
           ++ V LS  ++ YA GLPLAL+VLGS L G ++DEW+S   +L+  P  EI D+L+IS+D
Sbjct: 373 EDYVTLSNSMVAYAQGLPLALKVLGSSLHGMTIDEWKSASNKLKNNPKKEINDVLRISYD 432

Query: 237 GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHD 296
            L   EKK+FLDIACFF+G D+ +V+  L+GC  H    IRVL +KCLIT+ ++ + MH+
Sbjct: 433 MLDGSEKKVFLDIACFFEGEDKAFVSKILDGCNLHATYNIRVLCDKCLITISDSMIQMHN 492

Query: 297 LLQELGQQIVQRQSPEELGKRSRLW 321
           L+Q++G  I++ + PE+  K SRLW
Sbjct: 493 LIQQMGWAIIREEYPEDPSKWSRLW 517


>gi|356506534|ref|XP_003522035.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1035

 Score =  293 bits (749), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 213/609 (34%), Positives = 325/609 (53%), Gaps = 37/609 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D     L  L+   S DVR+IGI GM G+GKTTI   +++    E+E+  FL  V E  
Sbjct: 186 IDKPIADLESLLRQESKDVRVIGIWGMHGIGKTTIVEELFNKQCFEYESCCFLAKVNEEL 245

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGI--DMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            + G++ ++ +L+S LL   ++   N  +G+  D+L  R+ R K+ +V+DDV D  Q++ 
Sbjct: 246 ERHGVICVKEKLISTLL--TEDVKINTTNGLPNDIL-RRIGRMKIFIVLDDVNDYDQVEK 302

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G  +W GSGSRIIIT+RD  +L  + VD++Y+   L+ DEA +LF + AF      +E
Sbjct: 303 LVGTLDWLGSGSRIIITARDRQILH-NKVDDIYEIGSLSIDEAGELFCLNAFNQSHLGKE 361

Query: 179 C---VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
               + LS  ++ YA G+PL L+VLG  L G+  + W+S L++L+  P  ++ DI++ S+
Sbjct: 362 YWDYLLLSYWMVDYAKGVPLVLKVLGQLLRGKDKEVWKSQLDKLQKMPNKKVHDIMKPSY 421

Query: 236 DGLQELEKKIFLDIACFFKGND--RDYVTNFLEG--CGFHPVIGIRVLIEKCLITV-HNN 290
             L   EK IFLDIACFF G +   DY+   L          IG+  L +K LIT+  +N
Sbjct: 422 YDLDRKEKNIFLDIACFFNGLNLKVDYLNLLLRDHENDNSVAIGLERLKDKSLITISEDN 481

Query: 291 TLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHE 350
           T+ MH+++QE+G++I   +S E+LG RSRL   +E+  VL  + GT  +  I +D     
Sbjct: 482 TVSMHNIVQEMGREIAHEESSEDLGSRSRLSDADEIYEVLNNNKGTSAIRSISIDLSKIR 541

Query: 351 NEVYLCASAKAFSKMTNLRLLKICNLQ-------LPNGLEYLSNRLRLLGWRGYPLKFLP 403
               L    + FSKM+NL+ L             LP GLEYL + +R L W+  PL+ LP
Sbjct: 542 K---LKLGPRIFSKMSNLQFLDFHGKYNRDDMDFLPEGLEYLPSNIRYLRWKQCPLRSLP 598

Query: 404 SNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
                   + + +  S + +LW G+++L  LK + L   + +  +PDFT A NLE L L 
Sbjct: 599 EKFSAKDLVILDLSDSCVQKLWDGMQNLVNLKEVRLYRCQFMEELPDFTKATNLEVLNLS 658

Query: 464 GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGK-ILMKSLEKLNLKSLPTTISGLKCL 522
            C  L  +H S+    KL  L +  C +L  L    I + SL  LNL+       GLK L
Sbjct: 659 HCG-LSSVHSSIFSLKKLEKLEITYCFNLTRLTSDHIHLSSLRYLNLE----LCHGLKEL 713

Query: 523 ST-------LDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLK 575
           S        L++ G    +  P        L  L +  + I+ LP SI+  + L  L+L+
Sbjct: 714 SVTSENMIELNMRGSFGLKVLPSSFGRQSKLEILVIYFSTIQSLPSSIKDCTRLRCLDLR 773

Query: 576 NCRSLEILP 584
           +C  L+ +P
Sbjct: 774 HCDFLQTIP 782



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 129/510 (25%), Positives = 210/510 (41%), Gaps = 100/510 (19%)

Query: 509 LKSLPTTISGLKCLSTLDVSG-----DLKFREFPEIVEHM-EHLSELHLEGTAIRGLPLS 562
           LK  P   S +  L  LD  G     D+ F   PE +E++  ++  L  +   +R LP  
Sbjct: 543 LKLGPRIFSKMSNLQFLDFHGKYNRDDMDF--LPEGLEYLPSNIRYLRWKQCPLRSLPEK 600

Query: 563 IELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL 622
                 LV+L+L +   ++ L   + NL  L+ ++L  C  +++ P+  ++  +L  L L
Sbjct: 601 FSA-KDLVILDLSDS-CVQKLWDGMQNLVNLKEVRLYRCQFMEELPDFTKAT-NLEVLNL 657

Query: 623 DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETL 682
               +  V SSI  L KLE L ++ C NL RL S  I L SL+ LNL  C          
Sbjct: 658 SHCGLSSVHSSIFSLKKLEKLEITYCFNLTRLTSDHIHLSSLRYLNLELC---------- 707

Query: 683 GQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLME 742
                L+EL ++   +         I +N MR S  LK+                     
Sbjct: 708 ---HGLKELSVTSENM---------IELN-MRGSFGLKV--------------------- 733

Query: 743 GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQV 802
             LPS  G    L+ L +  ++  SLP+SI   ++L  ++L  C  LQ++P+LPP++  +
Sbjct: 734 --LPSSFGRQSKLEILVIYFSTIQSLPSSIKDCTRLRCLDLRHCDFLQTIPELPPSLETL 791

Query: 803 RVNGCASLVTLL---DALKLCKSDSTMIA-----CLDSLKLLG----------------- 837
             N C  L T+L    A++  K +   I      CLD   L                   
Sbjct: 792 LANECRYLRTVLFPSTAVEQLKENRKKIEFWNCLCLDKHSLTAIELNVQINVMKFACQHF 851

Query: 838 -NKSLAFSMLREYL---EAVSNTRQ----HLSVVVPGSEIPEWFMYQNEGSSITVTRPSN 889
               L F    +Y+   +  S   +      +   PGS  P+W  Y+     + +   S 
Sbjct: 852 PAPELDFDDYNDYVVIHDLQSGYEECDSYQATYAYPGSTFPKWLEYKTTNDYVVIDLSSG 911

Query: 890 LYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIG--FRDKFGQAGS 947
             + +  +G+  C  F V K+S+ ++    Y T   +C  G G  G    + +K     S
Sbjct: 912 QLSHQ--LGFIFC--FIVPKDSKRDDKLILYITIS-DCE-GEGEKGSTKMYMNKSDSTKS 965

Query: 948 DHLWLLYLSRQTCYDIRLPLESNLEPFESN 977
           DH+ ++Y   Q C      +  N++ F+ N
Sbjct: 966 DHVCVMY--DQRCSHYLNSMAKNMKRFKIN 993


>gi|6692110|gb|AAF24575.1|AC007764_17 F22C12.17 [Arabidopsis thaliana]
          Length = 1195

 Score =  293 bits (749), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 226/684 (33%), Positives = 347/684 (50%), Gaps = 41/684 (5%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-- 58
            +++   K++ L+D  + +V+M+ I G  G+GK+TI R ++ L+S+ F  + F+DN+R   
Sbjct: 388  IEAHLRKIQSLLDLDNDEVKMVAISGPAGIGKSTIGRALHSLLSNRFHHTCFVDNLRGSH 447

Query: 59   ---ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQ 115
               +   G  + LQ QLLS++L    + I +    +  +  RL   KV +++DDV DVKQ
Sbjct: 448  PIGLDEYGLKLRLQEQLLSKILNQDGSRICH----LGAIKERLCDMKVFIILDDVNDVKQ 503

Query: 116  LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP 175
            L++LA    WFG GSRII+T+ ++ LLK HG++  Y     + +EA+++    AF+    
Sbjct: 504  LEALANESNWFGPGSRIIVTTENKELLKQHGINNTYYVGFPSDEEAIKILCRYAFRQSSS 563

Query: 176  LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
                 +L+  +    G LPL L V+GS L G++ +EW   + RLE     +I  +L++ +
Sbjct: 564  RHGFKKLTRSVTELCGKLPLGLRVVGSSLHGKNEEEWEYVIRRLETIIDRDIEQVLRVGY 623

Query: 236  DGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWM 294
            + L E E+ +FL IA FF   D D V   L          + +L+ K LI +  +  + M
Sbjct: 624  ESLHENEQSLFLHIAIFFNYEDGDLVKAMLAENDLDIEHELNILVNKSLIYISTDGRIRM 683

Query: 295  HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
            H LLQ +G+Q  QR+ P    KR  L   +E+CHVL    GT  V GI+ D     NEV 
Sbjct: 684  HKLLQLVGRQANQREEP---WKRRILIDAQEICHVLENDIGTGAVSGILFDT-SGINEVS 739

Query: 355  LCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNL 406
            +  S KA  +M NLR L +          + +P  +E+   RLRLL W  YP K LP   
Sbjct: 740  I--SNKALRRMCNLRFLSVYKTKHDGYNRMDIPEDMEF-PPRLRLLHWDAYPSKCLPLKF 796

Query: 407  QMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
            + +  +E+ M  SR+  LW G + L KLK + L  S NL  +PD + A NLE L L  C 
Sbjct: 797  RAENLVELDMKDSRLEYLWPGTQLLTKLKKLNLEGSYNLKELPDLSNATNLEMLDLSVCL 856

Query: 467  RLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLPTTISGLK 520
             L E+  S+   +KL ++ M  C SL  +P  I + SLE +       LK+ P   + +K
Sbjct: 857  ALAELPSSIKNLHKLDVIYMDLCESLHMIPTNINLASLETMYMTGCPQLKTFPAFSTKIK 916

Query: 521  CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL 580
             L  +         E P  + H   L ++ L G+  R L     L S L  L+L +    
Sbjct: 917  RLYLVRTG----VEEVPASITHCSRLLKIDLSGS--RNLKSITHLPSSLQTLDLSSTDIE 970

Query: 581  EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
             I    + +L+ L  L+L  C KLK  PE+  S++ L+    D  S++ V  +  L T  
Sbjct: 971  MIADSCIKDLQRLDHLRLCRCRKLKSLPELPASLRLLTA--EDCESLERV--TYPLNTPT 1026

Query: 641  ELLNLSDCKNLVRLPSSIIALKSL 664
              LN ++C  L      +I  +SL
Sbjct: 1027 GQLNFTNCLKLGEEAQRVIIQQSL 1050



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 151/357 (42%), Gaps = 55/357 (15%)

Query: 535  EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
            + PE +E    L  LH +    + LPL       LV L++K+ R LE L      L  L+
Sbjct: 768  DIPEDMEFPPRLRLLHWDAYPSKCLPLKFRA-ENLVELDMKDSR-LEYLWPGTQLLTKLK 825

Query: 595  SLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRL 654
             L L G   LK+ P++  +                        T LE+L+LS C  L  L
Sbjct: 826  KLNLEGSYNLKELPDLSNA------------------------TNLEMLDLSVCLALAEL 861

Query: 655  PSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIP----I 710
            PSSI  L  L  + +  C  L  +P  +  + SLE + ++G   P   ++ ++      +
Sbjct: 862  PSSIKNLHKLDVIYMDLCESLHMIPTNI-NLASLETMYMTG--CPQLKTFPAFSTKIKRL 918

Query: 711  NLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGA--LPSDIGNLCSLKELYLSKNSFVSL 768
             L+R  V     S++    L K++L+    ++    LPS      SL+ L LS      +
Sbjct: 919  YLVRTGVEEVPASITHCSRLLKIDLSGSRNLKSITHLPS------SLQTLDLSSTDIEMI 972

Query: 769  PTS-ITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMI 827
              S I  L +L ++ L  C++L+SLP+LP ++R +    C SL  +   L          
Sbjct: 973  ADSCIKDLQRLDHLRLCRCRKLKSLPELPASLRLLTAEDCESLERVTYPLNTPTGQLNFT 1032

Query: 828  ACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
             CL     LG ++    + +  ++             PGS +P  F ++  G+S+ +
Sbjct: 1033 NCLK----LGEEAQRVIIQQSLVK---------HACFPGSVMPSEFNHRARGNSLKI 1076


>gi|449443189|ref|XP_004139363.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 967

 Score =  292 bits (748), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 203/585 (34%), Positives = 316/585 (54%), Gaps = 34/585 (5%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK-GGLVSLQRQLLS 74
           S+++ M+G+ G+GG+GKTT+A+ +Y+ I+ EFE   FL NVRE S++  GLV LQ+ LL 
Sbjct: 209 SNEITMVGLYGIGGMGKTTLAKALYNKIADEFEGCCFLSNVREASNQYWGLVELQKTLLR 268

Query: 75  QLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIII 134
           ++L      + NV  GI ++  RL  KK++L++DDV   +QLQ+LAG   WFG GS++I 
Sbjct: 269 EILMDDSIKVSNVGIGISIIRDRLCSKKIILILDDVDTHEQLQALAGGHHWFGHGSKVIA 328

Query: 135 TSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLP 194
           T+R++ LL +HG + + + +GLN  E L+LF+  AF    P  + + +S R + Y  GLP
Sbjct: 329 TTRNKQLLASHGFNILKRVNGLNAIEGLELFSWHAFNNCHPSSDYLDVSKRAVHYCKGLP 388

Query: 195 LALEVLGSFLSGRSVDEWRSTLERLEIEPPSEIL-----DILQISFDGLQELEKKIFLDI 249
           LALEVLGSFL+  S+D+ +S  ER+  E  +  L     DIL+IS+D L++  K IFL I
Sbjct: 389 LALEVLGSFLN--SIDD-QSKFERILDEYENSYLDKGIQDILRISYDELEQDVKDIFLYI 445

Query: 250 ACFFKGNDRDYVTNFLEGCG--FHPVIGIRVLIEKCLITVHN-NTLWMHDLLQELGQQIV 306
           +C F   D++ V   L+ C   F   +GI+ L +  L+T+   N + MHDL+Q++G  I 
Sbjct: 446 SCCFVHEDKNEVQMMLKECDSRFRLEMGIKKLTDLSLLTIDKFNRVEMHDLIQQMGHTIH 505

Query: 307 QRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMT 366
             ++     KR RL  E++V  VL        V+ I L N+H   E  L   ++ F K+ 
Sbjct: 506 LLETSNS-HKRKRLLFEKDVMDVLNGDMEARAVKVIKL-NFHQPTE--LDIDSRGFEKVK 561

Query: 367 NLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWK 426
           NL +LK+ N+     LEYL + LR + W  +P   LPS   ++K  E+ M  S I     
Sbjct: 562 NLVVLKVHNVTSSKSLEYLPSSLRWMIWPKFPFSSLPSTYSLEKLTELSMPSSFIKHFGN 621

Query: 427 GIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNM 486
           G  +   LK + L++S+ L  + D + A NLE+L L  C +L  +H S+    KL  L +
Sbjct: 622 GYLNCKWLKRINLNYSKFLEEISDLSSAINLEELNLSECKKLVRVHESVGSLGKLAKLEL 681

Query: 487 KDCTSLIT-LPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEH 545
               +  T  P  + +KSL+KL  K++P         + +D                   
Sbjct: 682 SSHPNGFTQFPSNLKLKSLQKLCDKTIPNDWKSYWSSTFVDRC----------------- 724

Query: 546 LSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNL 590
           +   H        L   +++  G++ +N + CRSL   P  ++  
Sbjct: 725 MQRAHYSSNYCGFLEEILKVPEGVIYMNAQGCRSLARFPDNIAEF 769



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 162/388 (41%), Gaps = 86/388 (22%)

Query: 524 TLDV-SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLL---NLKNCRS 579
            +DV +GD++ R    I  +    +EL ++    RG     E +  LV+L   N+ + +S
Sbjct: 524 VMDVLNGDMEARAVKVIKLNFHQPTELDIDS---RGF----EKVKNLVVLKVHNVTSSKS 576

Query: 580 LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTK 639
           LE LP   S+L+ +   K    S    +     S++ L+EL +  + IK   +       
Sbjct: 577 LEYLP---SSLRWMIWPKFPFSSLPSTY-----SLEKLTELSMPSSFIKHFGNGYLNCKW 628

Query: 640 LELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP 699
           L+ +NL+  K L  + S + +  +L+ LNLS C KL  V E++G +  L +L++S  + P
Sbjct: 629 LKRINLNYSKFLEEI-SDLSSAINLEELNLSECKKLVRVHESVGSLGKLAKLELS--SHP 685

Query: 700 HSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELY 759
           +    ++  P N       LKL SL  LC             +  +P+D  +  S     
Sbjct: 686 NG---FTQFPSN-------LKLKSLQKLC-------------DKTIPNDWKSYWS----- 717

Query: 760 LSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKL 819
              ++FV       H S         C  L+ + ++P  +  +   GC SL    D +  
Sbjct: 718 ---STFVDRCMQRAHYSS------NYCGFLEEILKVPEGVIYMNAQGCRSLARFPDNI-- 766

Query: 820 CKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEG 879
               +  I+C DS               EY +     +    +++   +IPEWF +++  
Sbjct: 767 ----AEFISC-DS---------------EYADG----KYKQLILMNNCDIPEWFHFKSTN 802

Query: 880 SSITVTRPSNLYNKKKLVGYAICCVFHV 907
           +SIT     N Y   KL   A C    V
Sbjct: 803 NSITFPTTFN-YPGWKLKVLAACVKVQV 829


>gi|296081089|emb|CBI18283.3| unnamed protein product [Vitis vinifera]
          Length = 1183

 Score =  292 bits (748), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 204/572 (35%), Positives = 309/572 (54%), Gaps = 73/572 (12%)

Query: 32  KTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGI 91
           KTTIA+ +Y+ IS++++ S FL N+RE  SKG ++ LQ++LL  +LK     I NV +G+
Sbjct: 22  KTTIAKAIYNEISYQYDGSSFLRNMRE-RSKGDILQLQKELLHGILKGKGFRISNVDEGV 80

Query: 92  DMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVY 151
           +M+   L  K+VL++  DV D+ QL+ LA  ++WF   S IIITSRD+ +L  +GV   Y
Sbjct: 81  NMIKRCLNSKRVLVIFYDVDDLTQLEYLAEEKDWFDVKSTIIITSRDKQVLAHYGVHISY 140

Query: 152 KPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDE 211
           +    N  EA++LF++ AFK   P +    LS  +I YA GLPLAL++LG+ L G+ + E
Sbjct: 141 EVSKFNNKEAIELFSLWAFKQNLPKEAYKNLSYNMIEYADGLPLALKLLGASLFGKKISE 200

Query: 212 WRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFH 271
           W S L +L+  P  EI  +L+ISFDGL +++KKIFLD+ACFFK  D+ +V+  L   G H
Sbjct: 201 WESALYKLKRIPHMEINKVLRISFDGLDDMDKKIFLDVACFFKEKDKYFVSRIL---GPH 257

Query: 272 PVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLT 331
              GI  L +KCLIT+  N + MHDL+Q++G++I++++ PE+LG+RSR+W + +  HVLT
Sbjct: 258 AEYGIATLNDKCLITISKNMIDMHDLIQQMGREIIRQECPEDLGRRSRVW-DSDAYHVLT 316

Query: 332 ESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICN------LQLPNGLEYL 385
            + GT  +EG+ LD    +   +   + ++F +M  LRLLKI        + L    E  
Sbjct: 317 RNMGTRAIEGLFLDICKFDPIQF---AKESFKQMDRLRLLKIHKGDEYDLISLKRFPEIK 373

Query: 386 SN--RLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSE 443
            N  +LR L   G  +K LPS+L                      +HL  L+++    S 
Sbjct: 374 GNMRKLRELDLSGTAIKVLPSSL---------------------FEHLKALEILSFRMSS 412

Query: 444 NLIRMP-DFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMK 502
            L ++P D     +LE L L  C  +    PS + H                      + 
Sbjct: 413 KLNKIPIDICCLSSLEVLDLSHCNIMEGGIPSDICH----------------------LS 450

Query: 503 SLEKLNLKS-----LPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIR 557
           SL++LNLKS     +P TI+ L  L  L++S     +  PE+   +  L       T+ R
Sbjct: 451 SLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLQHIPELPSSLRLLDAHGSNPTSSR 510

Query: 558 GLPLSIELLSGLVLLNLKNCRSLEILPVTVSN 589
                    S L + +L NC + EI  +  S+
Sbjct: 511 A--------SFLPVHSLVNCFNSEIQDLNCSS 534



 Score =  202 bits (514), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 150/467 (32%), Positives = 229/467 (49%), Gaps = 67/467 (14%)

Query: 551  LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI 610
             + + ++ LP+ IE  S L  L L++C++L+ LP ++   K L +L  SGCS+L+ FPEI
Sbjct: 769  FKDSDMKELPI-IENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEI 827

Query: 611  VRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLS 670
            +  M    +L LDGT+IKE+PSSI+ L  L+ LNL+ C+NLV LP SI  L SL+TL + 
Sbjct: 828  LEDMVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVV 887

Query: 671  GCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSL 730
             C KL  +PE LG+++SLE L +                      S+  +LPSLSGLCSL
Sbjct: 888  SCPKLNKLPENLGRLQSLEYLYVKDL------------------DSMNCQLPSLSGLCSL 929

Query: 731  RKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQ 790
              L L +C L E  +PS I +L SL+ L L  N F S+P  I  L  L+  +L  C+ LQ
Sbjct: 930  ITLQLINCGLRE--IPSGIWHLSSLQHLSLRGNRFSSIPDGINQLYNLIVFDLSHCQMLQ 987

Query: 791  SLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYL 850
             +P+LP ++  +  + C+SL  L     L    S++  C              S ++E+ 
Sbjct: 988  HIPELPSSLEYLDAHQCSSLEILSSPSTLLW--SSLFKCFK------------SRIQEF- 1032

Query: 851  EAVSNTRQHLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLK 909
                     + + +PGS  IP W  +Q  GS IT+  P   Y     +G+A+C +   L 
Sbjct: 1033 ----EVNFKVQMFIPGSNGIPGWISHQKNGSKITMRLPRYWYENDDFLGFALCSLHVPLD 1088

Query: 910  NSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQA----------GSDHLWLLYLSRQT 959
                N  F         C +          D F              S+ +WL+Y  +  
Sbjct: 1089 IEEENRSF--------KCKLNFNNRAFLLVDDFWSKRNCERCLHGDESNQVWLIYYPKS- 1139

Query: 960  CYDIRLPLESNLEPFESNHVNVSFEPWLG-QGLEVKMCGLHPVYMDE 1005
                ++P + +   + +  +N SF  + G + ++V+ CG H +Y  E
Sbjct: 1140 ----KIPKKYHSNEYRT--LNTSFSEYFGTEPVKVERCGFHFIYAQE 1180



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 124/238 (52%), Gaps = 15/238 (6%)

Query: 675 LENVPETLGQIESLEELDISGTAV---PHSTSWY-SYIPINLMRKSVAL-KLP-SLSGLC 728
           L+  PE  G +  L ELD+SGTA+   P S   +   + I   R S  L K+P  +  L 
Sbjct: 366 LKRFPEIKGNMRKLRELDLSGTAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICCLS 425

Query: 729 SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKR 788
           SL  L+L+ CN+MEG +PSDI +L SLKEL L  N F S+P +I  LS+L  + L  C+ 
Sbjct: 426 SLEVLDLSHCNIMEGGIPSDICHLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQN 485

Query: 789 LQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLRE 848
           LQ +P+LP ++R +  +G     +    L +     +++ C +S     N S    +  E
Sbjct: 486 LQHIPELPSSLRLLDAHGSNPTSSRASFLPV----HSLVNCFNSEIQDLNCSSRNEVWSE 541

Query: 849 YLEAVSNTRQHLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
              +   ++  + +V+PGS  +PEW M   +   I    P N     + +G+A+CCV+
Sbjct: 542 NSVSTYGSKG-ICIVLPGSSGVPEWIM---DDQGIATELPQNWNQNNEFLGFALCCVY 595



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 107/187 (57%), Gaps = 3/187 (1%)

Query: 509 LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSG 568
           LKSLP++I   K L+TL  SG  +   FPEI+E M    +L L+GTAI+ +P SI+ L G
Sbjct: 797 LKSLPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDLDGTAIKEIPSSIQRLRG 856

Query: 569 LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSI 627
           L  LNL  C +L  LP ++ NL  LR+L +  C KL K PE +  ++ L  L++ D  S+
Sbjct: 857 LQYLNLAYCENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSM 916

Query: 628 KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
                S+  L  L  L L +C  L  +PS I  L SL+ L+L G  +  ++P+ + Q+ +
Sbjct: 917 NCQLPSLSGLCSLITLQLINC-GLREIPSGIWHLSSLQHLSLRG-NRFSSIPDGINQLYN 974

Query: 688 LEELDIS 694
           L   D+S
Sbjct: 975 LIVFDLS 981



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 71/127 (55%), Gaps = 2/127 (1%)

Query: 531 LKFREFPEIVEHMEHLSELHLEGTAIRGLPLSI-ELLSGLVLLNLKNCRSLEILPVTVSN 589
           +  + FPEI  +M  L EL L GTAI+ LP S+ E L  L +L+ +    L  +P+ +  
Sbjct: 364 ISLKRFPEIKGNMRKLRELDLSGTAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICC 423

Query: 590 LKCLRSLKLSGCSKLKK-FPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDC 648
           L  L  L LS C+ ++   P  +  +  L EL L     + +P++I  L++L++LNLS C
Sbjct: 424 LSSLEVLDLSHCNIMEGGIPSDICHLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHC 483

Query: 649 KNLVRLP 655
           +NL  +P
Sbjct: 484 QNLQHIP 490



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 19/183 (10%)

Query: 419  SRIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPNLEKLILEGCTRLYEIHPSLLL 477
            + I E+   I+ L  L+ + L++ ENL+ +P+      +L  LI+  C +L ++  +L  
Sbjct: 842  TAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLGR 901

Query: 478  HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
               L  L +KD               L+ +N + LP ++SGL  L TL +  +   RE P
Sbjct: 902  LQSLEYLYVKD---------------LDSMNCQ-LP-SLSGLCSLITLQLI-NCGLREIP 943

Query: 538  EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
              + H+  L  L L G     +P  I  L  L++ +L +C+ L+ +P   S+L+ L + +
Sbjct: 944  SGIWHLSSLQHLSLRGNRFSSIPDGINQLYNLIVFDLSHCQMLQHIPELPSSLEYLDAHQ 1003

Query: 598  LSG 600
             S 
Sbjct: 1004 CSS 1006



 Score = 47.4 bits (111), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 9/113 (7%)

Query: 490 TSLITLPGKIL--MKSLEKLN------LKSLPTTISGLKCLSTLDVSG-DLKFREFPEIV 540
           T++  LP  +   +K+LE L+      L  +P  I  L  L  LD+S  ++     P  +
Sbjct: 387 TAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICCLSSLEVLDLSHCNIMEGGIPSDI 446

Query: 541 EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCL 593
            H+  L EL+L+    R +P +I  LS L +LNL +C++L+ +P   S+L+ L
Sbjct: 447 CHLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLQHIPELPSSLRLL 499



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 43/239 (17%)

Query: 456  NLEKLILEGCTRLY---EIHPSLLLHNKLIILNMKDCTSLITLPGKIL-MKSLEKLNLK- 510
            +L  L   GC++L    EI   +++  KL +    D T++  +P  I  ++ L+ LNL  
Sbjct: 809  SLTTLSCSGCSQLESFPEILEDMVVFQKLDL----DGTAIKEIPSSIQRLRGLQYLNLAY 864

Query: 511  -----SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIEL 565
                 +LP +I  L  L TL V    K  + PE +  ++ L  L+++             
Sbjct: 865  CENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKD------------ 912

Query: 566  LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT 625
                  L+  NC+    LP ++S L  L +L+L  C  L++ P  +  +  L  L L G 
Sbjct: 913  ------LDSMNCQ----LP-SLSGLCSLITLQLINCG-LREIPSGIWHLSSLQHLSLRGN 960

Query: 626  SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE--NVPETL 682
                +P  I  L  L + +LS C+ L  +P       SL+ L+   C  LE  + P TL
Sbjct: 961  RFSSIPDGINQLYNLIVFDLSHCQMLQHIPE---LPSSLEYLDAHQCSSLEILSSPSTL 1016


>gi|15223555|ref|NP_176047.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9954758|gb|AAG09109.1|AC009323_20 Putative disease resistance protein [Arabidopsis thaliana]
 gi|332195284|gb|AEE33405.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1096

 Score =  292 bits (748), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 211/654 (32%), Positives = 338/654 (51%), Gaps = 65/654 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +++   K+  L+D      +++GI G  G+GK+TIAR ++ ++S  F+ + F+DN+ E S
Sbjct: 191 LEAHLRKIESLLDLDYDGAKIVGISGPAGIGKSTIARALHSVLSKRFQHNCFMDNLHE-S 249

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDM-----LGSRLQRKKVLLVIDDVVDVKQ 115
            K GLV  +  L  +L +   + I N+ DGI +     +  RL  +KVL+++DDV  + Q
Sbjct: 250 YKIGLV--EYGLRLRLQEQLLSKILNL-DGIRIAHLGVIRERLHDQKVLIILDDVESLDQ 306

Query: 116 LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP 175
           L +LA N EWFG GSR+I+T+ ++ +L+ HG+ ++Y     +  EAL +F + AF+   P
Sbjct: 307 LDALA-NIEWFGPGSRVIVTTENKEILQQHGISDIYHVGFPSSKEALMIFCLSAFRQLSP 365

Query: 176 LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
               + L+A + +  G LPLAL VLGS L G++  +W   L RL+      I  +L++ +
Sbjct: 366 PDRFMNLAAEVAKLCGYLPLALHVLGSSLRGKNYSDWIEELPRLQTCLDGRIESVLKVGY 425

Query: 236 DGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT---L 292
           + L E ++ +FL IA FF     DYVT+ L     +  +G+++L  + LI + +     +
Sbjct: 426 ESLHEKDQALFLYIAVFFNYQHADYVTSMLAKTNLNVRLGLKILANRHLIHIGHGAKGIV 485

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            MH LL+ + +Q++ +Q P    KR  L   +E+ +VL  + G   + GI  D      E
Sbjct: 486 VMHRLLKVMARQVISKQEP---WKRQILVDTQEISYVLENAEGNGSIAGISFD----VGE 538

Query: 353 V-YLCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLP 403
           +  L  SAKAF +M NL LLK+ +        + +P  +++L  RL LL W  Y  K LP
Sbjct: 539 INKLTISAKAFERMHNLLLLKVYDPWFTGKGQVHIPEEMDFLP-RLSLLRWDAYTRKTLP 597

Query: 404 SNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
                +  +E+ M  S++ +LW+G + L  LK M LS S  L  +P+ + A NLE+L L 
Sbjct: 598 RRFCPENLVELNMPDSQLEKLWEGTQLLANLKTMKLSRSSRLKELPNLSNAKNLERLDLH 657

Query: 464 GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEK------LNLKSLPTTIS 517
            C  L E+  S+   +KL  L    C  L  +P    + SLE       L LKS P   +
Sbjct: 658 ECVALLELPSSISNLHKLYFLETNHCRRLQVIPTLTNLVSLEDIKMMGCLRLKSFPDIPA 717

Query: 518 GLKCLSTLDVSGDLKFREFPEIVEHMEHL----------------------SELHLEGTA 555
            +  LS ++ +      EFP  + H  H+                      +ELH++ + 
Sbjct: 718 NIIRLSVMETT----IAEFPASLRHFSHIESFDISGSVNLKTFSTLLPTSVTELHIDNSG 773

Query: 556 IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPE 609
           I  +   I+ L  L +L L NC+ L  LP   S+LK LR+   S C  L++  E
Sbjct: 774 IESITDCIKGLHNLRVLALSNCKKLTSLPKLPSSLKWLRA---SHCESLERVSE 824



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 170/370 (45%), Gaps = 53/370 (14%)

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
           PE ++ +  LS L  +    + LP        LV LN+ + + LE L      L  L+++
Sbjct: 574 PEEMDFLPRLSLLRWDAYTRKTLPRRF-CPENLVELNMPDSQ-LEKLWEGTQLLANLKTM 631

Query: 597 KLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
           KLS  S+LK+ P +  + K+L  L L +  ++ E+PSSI  L KL  L  + C+ L  +P
Sbjct: 632 KLSRSSRLKELPNLSNA-KNLERLDLHECVALLELPSSISNLHKLYFLETNHCRRLQVIP 690

Query: 656 SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRK 715
           + +  L SL+ + + GC +L++ P+    I  L  ++ +    P S   +S+I    +  
Sbjct: 691 T-LTNLVSLEDIKMMGCLRLKSFPDIPANIIRLSVMETTIAEFPASLRHFSHIESFDISG 749

Query: 716 SVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHL 775
           SV LK  + S L                 LP+      S+ EL++  +   S+   I  L
Sbjct: 750 SVNLK--TFSTL-----------------LPT------SVTELHIDNSGIESITDCIKGL 784

Query: 776 SKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKL 835
             L  + L +CK+L SLP+LP +++ +R + C SL  + + L    +D     C      
Sbjct: 785 HNLRVLALSNCKKLTSLPKLPSSLKWLRASHCESLERVSEPLNTPNADLDFSNC------ 838

Query: 836 LGNKSLAFSMLREYLEAVSNTR-QHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKK 894
                  F + R+  +A+   R      ++PG ++P  F ++  G+S+T+   ++     
Sbjct: 839 -------FKLDRQARQAIFQQRFVDGRALLPGRKVPALFDHRARGNSLTIPNSAS----- 886

Query: 895 KLVGYAICCV 904
               Y +C V
Sbjct: 887 ----YKVCVV 892


>gi|297790452|ref|XP_002863116.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308940|gb|EFH39375.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1090

 Score =  292 bits (747), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 225/680 (33%), Positives = 348/680 (51%), Gaps = 79/680 (11%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M    EK+  L+   S +VRMIGI G  G+GKTTIARV+Y+ +S  F+ S F++++    
Sbjct: 240 MREHLEKMEPLLCLDSDEVRMIGIWGPSGIGKTTIARVIYNKLSGSFQLSVFMESIEAKY 299

Query: 61  SK------GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
           ++         + LQ+Q +SQ+   +D  I      + ++  RL+ KKVL+V+D V    
Sbjct: 300 TRPCSDDYSAKLQLQQQFMSQITNQSDMKI----SHLGVVQDRLKDKKVLVVLDGVDKSM 355

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL ++     WFG GSRIIIT++D  L ++HG++ +YK    + +EALQ+    AF    
Sbjct: 356 QLDAMVKETWWFGPGSRIIITTQDRKLFRSHGINHIYKIDFPSTEEALQILCTYAFG--- 412

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
                 Q S  ++     L   L  L + L      EW   L RL     + IL IL+ S
Sbjct: 413 ------QNSPNVV-----LKNLLRKLHNLLM-----EWMKALPRLRNSLDANILSILKFS 456

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
           +D L + +K +FL IACFF   + + V ++L          + VL EK LI+++   + M
Sbjct: 457 YDALDDEDKYLFLHIACFFNHEEIEKVEDYLAETFLDVSHRLNVLAEKSLISLNRGYINM 516

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLT-ESTGTELVEGIVLDNYHHENEV 353
           HDLL +LG+ IV++QS  E G+R  L    E+C VL  ++ G+  + GI  +      + 
Sbjct: 517 HDLLVKLGRDIVRKQSIREPGQRLFLVDAREICEVLNLDANGSRSLMGINFNFGEDRIKE 576

Query: 354 YLCASAKAFSKMTNLRLLKI----CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMD 409
            L  S +AF  M+NL+ L++      + LP+GLEY+S +LRLL W  +P+  LP     +
Sbjct: 577 KLHISERAFQGMSNLQFLRVKGNNNTIHLPHGLEYISRKLRLLHWTYFPMTCLPPIFNTE 636

Query: 410 KTIEIYMCYSRIGELWKGIK------HLDKLKVMILSHSENLIRMPDFTGA-PNLEKLIL 462
             +E+ M YS++ +LW+GIK      +L  LK + LS    L+ +P   G   NL++L L
Sbjct: 637 FLVELDMSYSKLEKLWEGIKLPSSIGNLINLKELDLSSLSCLVELPSSIGNLINLKELDL 696

Query: 463 EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI-LMKSLEKLNLK------SLPTT 515
              + L E+  S+     L +LN++ C+SL+ LP  I  ++ L+ L L+       LP  
Sbjct: 697 SSLSCLVELPFSIGNATNLEVLNLRQCSSLVKLPFSIGNLQKLQTLTLRGCSKLEDLPAN 756

Query: 516 ISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLK 575
           I  L  L  LD++  L  + FPEI  ++E    L L+GTAI  +P SI+  S        
Sbjct: 757 IK-LGSLGELDLTDCLLLKRFPEISTNVEF---LRLDGTAIEEVPSSIKSWSR------- 805

Query: 576 NCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIE 635
                            L  + +S    LK FP    +   ++EL +  T I+E P  ++
Sbjct: 806 -----------------LNEVDMSYSENLKNFP---HAFDIITELHMTNTEIQEFPPWVK 845

Query: 636 LLTKLELLNLSDCKNLVRLP 655
             ++L +L L  CK LV LP
Sbjct: 846 KFSRLTVLILKGCKKLVSLP 865



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 26/308 (8%)

Query: 583 LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLTKLE 641
           LP ++ NL  L+ L LS  S L + P  + ++ +L EL L   S + E+P SI   T LE
Sbjct: 657 LPSSIGNLINLKELDLSSLSCLVELPSSIGNLINLKELDLSSLSCLVELPFSIGNATNLE 716

Query: 642 LLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG----TA 697
           +LNL  C +LV+LP SI  L+ L+TL L GC KLE++P  + ++ SL ELD++       
Sbjct: 717 VLNLRQCSSLVKLPFSIGNLQKLQTLTLRGCSKLEDLPANI-KLGSLGELDLTDCLLLKR 775

Query: 698 VPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKE 757
            P  ++   ++ ++    +   ++P  S + S  +LN  D +  E  L +       + E
Sbjct: 776 FPEISTNVEFLRLD---GTAIEEVP--SSIKSWSRLNEVDMSYSEN-LKNFPHAFDIITE 829

Query: 758 LYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDAL 817
           L+++       P  +   S+L  + L+ CK+L SLPQ+P +I  +    C SL  L    
Sbjct: 830 LHMTNTEIQEFPPWVKKFSRLTVLILKGCKKLVSLPQIPDSITYIYAEDCESLERL---- 885

Query: 818 KLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQN 877
             C   +  I CL   K        F + +E  + +  T      V+PG E+P +F +Q+
Sbjct: 886 -DCSFHNPNI-CLKFAK-------CFKLNQEARDLIIQTPTSNYAVLPGREVPAYFTHQS 936

Query: 878 -EGSSITV 884
             G S+T+
Sbjct: 937 TTGGSLTI 944


>gi|311992493|gb|ABR67409.2| TIR-NBS-LRR disease resistance protein [Cucumis melo subsp. melo]
          Length = 947

 Score =  292 bits (747), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 231/647 (35%), Positives = 325/647 (50%), Gaps = 120/647 (18%)

Query: 17  SDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK-GGLVSLQRQLLSQ 75
           +DV M+GI G+GG+GKTT+A+ +Y+ I+ +FE   FL NVRE S +  GL  LQ  LL +
Sbjct: 227 TDVNMVGIYGIGGIGKTTLAKALYNKIASQFEGCCFLSNVREASKQFNGLAQLQESLLYE 286

Query: 76  LLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIIT 135
           +L +    + N   GI+++ +RL  KKVL+V+DDV  ++QL++L G R+WFG GSRII+T
Sbjct: 287 ILTIYLKVV-NFDRGINIIRNRLCSKKVLIVLDDVDKLEQLEALVGGRDWFGQGSRIIVT 345

Query: 136 SRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPL 195
           +R++HLL +HG DE++   GLN ++A++LF+  AFK   P    + LS R   Y  G PL
Sbjct: 346 TRNKHLLSSHGFDEIHNILGLNEEKAIELFSWHAFKKNHPSSNYLNLSKRATSYCRGHPL 405

Query: 196 ALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKG 255
           AL VLGSFL  R   EW S            ILD          E E  +  DI      
Sbjct: 406 ALVVLGSFLCTRDQVEWCS------------ILD----------EFENSLNKDI------ 437

Query: 256 NDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELG 315
             +D +    +G                             L  ++G +IV  +S E LG
Sbjct: 438 --KDILQLSFDG-----------------------------LEDKMGHKIVCGESLE-LG 465

Query: 316 KRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICN 375
           KRSRLW  ++V  VL  ++GT+ V+ I LD     N   L    +AF KM NLRLL + N
Sbjct: 466 KRSRLWLVQDVWDVLVNNSGTDAVKAIKLD---FPNPTKLDVDLQAFRKMKNLRLLIVQN 522

Query: 376 LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLK 435
            +    +EYL + L+ + W G+P   LPS       + + + +S I    K +K  ++LK
Sbjct: 523 ARFCTKIEYLPDSLKWIKWHGFPQSTLPSCFITKNLVGLDLQHSFIKTFEKRLKDCERLK 582

Query: 436 VMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITL 495
            + LS+S  L ++PDF+ A NL +L L  CT L  I  SL   N LI+LN+  C++L   
Sbjct: 583 HVDLSYSTLLEQIPDFSAASNLGELYLINCTNLGMIDKSLFSLNNLIVLNLDGCSNLKKF 642

Query: 496 PGKILM------------KSLEKL------------------------------------ 507
           P    M            K LEK+                                    
Sbjct: 643 PRGYFMLSSLKELRLSYCKKLEKIPDLSAASNLERLYLQECTNLRLIHESVGSLDKLDHL 702

Query: 508 ------NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPL 561
                 NL  LP+ +  LK L  L++S   K   FP I E+M+ L  L L+ TAI+ LP 
Sbjct: 703 DLRQCTNLSKLPSHLR-LKSLQNLELSRCCKLESFPTIDENMKSLRHLDLDFTAIKELPS 761

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFP 608
           SI  L+ L  LNL +C +L  LP T+  L+ L  L LSGCS+ + FP
Sbjct: 762 SIGYLTELCTLNLTSCTNLISLPNTIYLLRNLDELLLSGCSRFRIFP 808



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 134/317 (42%), Gaps = 72/317 (22%)

Query: 419 SRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLH 478
           S + +  +G   L  LK + LS+ + L ++PD + A NLE+L L+ CT L  IH S+   
Sbjct: 637 SNLKKFPRGYFMLSSLKELRLSYCKKLEKIPDLSAASNLERLYLQECTNLRLIHESVGSL 696

Query: 479 NKLIILNMKDCTSLITLPGKILMKSLEKLNL----------------------------- 509
           +KL  L+++ CT+L  LP  + +KSL+ L L                             
Sbjct: 697 DKLDHLDLRQCTNLSKLPSHLRLKSLQNLELSRCCKLESFPTIDENMKSLRHLDLDFTAI 756

Query: 510 KSLPTTISGLKCLSTLDV------------------------SGDLKFREFPEIVEHMEH 545
           K LP++I  L  L TL++                        SG  +FR FP   +    
Sbjct: 757 KELPSSIGYLTELCTLNLTSCTNLISLPNTIYLLRNLDELLLSGCSRFRIFPHKWD--RS 814

Query: 546 LSELHLEGTAIRGLPLSIE----------LLSGLVLLNLKNCR--SLEILPVTVSNLKCL 593
           +  +      I     S+E          L S   LL+LK+C   + + L +       L
Sbjct: 815 IQPVCSPTKMIETTSWSLEFPHLLVPNESLFSHFTLLDLKSCNISNAKFLEILCDVAPFL 874

Query: 594 RSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLTKLELLNLSDCKNLV 652
             L+LS  +K    P  +     L  L L     ++E+P+   L   ++ ++ S C++LV
Sbjct: 875 SDLRLSE-NKFSSLPSCLHKFMSLWNLELKNCKFLQEIPN---LPKNIQKMDASGCESLV 930

Query: 653 RLPSSIIALKSLKTLNL 669
           R P++I+ + S K + L
Sbjct: 931 RSPNNIVDIISKKQVRL 947


>gi|21539521|gb|AAM53313.1| disease resistance RPP5-like protein [Arabidopsis thaliana]
          Length = 1147

 Score =  291 bits (746), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 263/886 (29%), Positives = 424/886 (47%), Gaps = 124/886 (13%)

Query: 21   MIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS--KGGLVSLQRQLLSQLLK 78
            M+GI G  G+GK+TI R ++  +S +F    F+       S   G  +S +++LLS++L 
Sbjct: 209  MVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGSDVSGMKLSWEKELLSEILG 268

Query: 79   LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
              D  I    D   ++  RL+ KKVL+++DDV +++ L++L G  EWFGSGSRII+ ++D
Sbjct: 269  QKDIKI----DHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGSRIIVITQD 324

Query: 139  EHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALE 198
            + LLK H +D VY+    +   AL++ +  AF    P  +  +L+  +    G LPL L 
Sbjct: 325  KQLLKAHEIDLVYEVELPSQGLALKMISQYAFGKDSPPDDFKELAFEVAELVGSLPLGLS 384

Query: 199  VLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDR 258
            VLGS L GR  DEW   + RL  +   +I + L++ +D L +  +++F  IACFF G   
Sbjct: 385  VLGSSLKGRDKDEWVKMMPRLRNDSDDKIEETLRVGYDRLNKKNRELFKCIACFFNGFKV 444

Query: 259  DYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPEELGKR 317
              V   LE       +G+ +L +K LI +  +  + MH+LL++LG++I + +S     KR
Sbjct: 445  SNVKELLED-----DVGLTMLADKSLIRITPDGDIEMHNLLEKLGREIDRAKSKGNPAKR 499

Query: 318  SRLWKEEEVCHVLTESTGTELVEGI-VLDNYHHENEVYLCASAKAFSKMTNLRLLKI--- 373
              L   E++  V+TE TGTE V GI V           L  + ++F  M NL+ L+I   
Sbjct: 500  QFLTNFEDIQEVVTEKTGTETVLGIRVPPTVLFSTRPLLVINEESFKGMRNLQYLEIGHW 559

Query: 374  ------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRI 421
                          + LP GL YL  +L+LL W   PLK LPS  + +  + + M YS++
Sbjct: 560  SEIGLWSEIGLWSKIDLPQGLVYLPLKLKLLKWNYCPLKSLPSTFKAEYLVNLIMKYSKL 619

Query: 422  GELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKL 481
             +LW+G   L  LK M L  S NL  +PD + A NLE+L L  C  L  +  S+    KL
Sbjct: 620  EKLWEGTLPLGSLKKMDLGCSNNLKEIPDLSLAINLEELNLSKCESLVTLPSSIQNAIKL 679

Query: 482  IIL---------------------------NMKDCTSLITLPGKILMKSLEKLNLKSLPT 514
              L                           +M+D   LI LP K+     +   +K LP+
Sbjct: 680  RTLYCSGVLLIDLKSLEGMCNLEYLSVDWSSMEDTQGLIYLPRKLKRLWWDYCPVKRLPS 739

Query: 515  TISG----------------------LKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLE 552
                                      L  L  + + G    +E P++   + +L  L+L 
Sbjct: 740  NFKAEYLVELRMENSDLEKLWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAI-NLERLYLF 798

Query: 553  G-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI- 610
            G  ++  LP SI+  + L+ L++++C+ LE  P  + NL+ L  L L+GC  L+ FP I 
Sbjct: 799  GCESLVTLPSSIQNATKLINLDMRDCKKLESFPTDL-NLESLEYLNLTGCPNLRNFPAIK 857

Query: 611  -----VRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSL 664
                    ++D +E+ + D    K +P+ ++ L         DC  L+R        + L
Sbjct: 858  MGCSYFEILQDRNEIEVEDCFWNKNLPAGLDYL---------DC--LMRCMPCEFRPEYL 906

Query: 665  KTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSL 724
              L++SGC K E + E +  + SL+ +D+S +              NL       ++P L
Sbjct: 907  TFLDVSGC-KHEKLWEGIQSLGSLKRMDLSESE-------------NLT------EIPDL 946

Query: 725  SGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELE 784
            S   +L++L L  C  +   LPS IGNL  L  L + + + + L  +  +LS L+ ++L 
Sbjct: 947  SKATNLKRLYLNGCKSLV-TLPSTIGNLHRLVRLEMKECTGLELLPTDVNLSSLIILDLS 1005

Query: 785  DCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACL 830
             C  L++ P +   I  + +   A     ++ +  C  D T ++ L
Sbjct: 1006 GCSSLRTFPLISTRIECLYLENTA-----IEEVPCCIEDLTRLSVL 1046



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 181/416 (43%), Gaps = 89/416 (21%)

Query: 360  KAFSKMTNLRLLKI--CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
            K+   M NL  L +   +++   GL YL  +L+ L W   P+K LPSN + +  +E+ M 
Sbjct: 693  KSLEGMCNLEYLSVDWSSMEDTQGLIYLPRKLKRLWWDYCPVKRLPSNFKAEYLVELRME 752

Query: 418  YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
             S + +LW G + L  LK M L  S+ L  +PD + A NLE+L L GC  L  +  S+  
Sbjct: 753  NSDLEKLWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAINLERLYLFGCESLVTLPSSIQN 812

Query: 478  HNKLI-----------------------ILNMKDCTSLITLP----GKILMKSLEKLNL- 509
              KLI                        LN+  C +L   P    G    + L+  N  
Sbjct: 813  ATKLINLDMRDCKKLESFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSYFEILQDRNEI 872

Query: 510  --------KSLPTTISGLKCL-------------STLDVSG------------------- 529
                    K+LP  +  L CL             + LDVSG                   
Sbjct: 873  EVEDCFWNKNLPAGLDYLDCLMRCMPCEFRPEYLTFLDVSGCKHEKLWEGIQSLGSLKRM 932

Query: 530  DL----KFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
            DL       E P++     +L  L+L G  ++  LP +I  L  LV L +K C  LE+LP
Sbjct: 933  DLSESENLTEIPDL-SKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLP 991

Query: 585  VTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLN 644
              V NL  L  L LSGCS L+ FP I   ++ L   +L+ T+I+EVP  IE LT+L +L 
Sbjct: 992  TDV-NLSSLIILDLSGCSSLRTFPLISTRIECL---YLENTAIEEVPCCIEDLTRLSVLL 1047

Query: 645  LSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
            +  C+ L  +  +I  L SL   + + C          G I++L +  +  T   H
Sbjct: 1048 MYCCQRLKNISPNIFRLTSLMVADFTDC---------RGVIKALSDATVVATMEDH 1094


>gi|255563218|ref|XP_002522612.1| phosphoprotein phosphatase [Ricinus communis]
 gi|223538088|gb|EEF39699.1| phosphoprotein phosphatase [Ricinus communis]
          Length = 838

 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 175/449 (38%), Positives = 266/449 (59%), Gaps = 29/449 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++SR + +  ++   S DVR++GI GMGG+GKTTIA  ++D IS +FE   F+ NVRE  
Sbjct: 191 INSRIKDIELILCLESKDVRILGIWGMGGIGKTTIASKIFDQISSQFERICFVANVREKL 250

Query: 61  SKGGLVSLQRQLLSQLL-KLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            K  L SLQ+++L++LL K   +    +      +   + RKKVL+V+DDV D +Q + L
Sbjct: 251 EKSTLDSLQQEILTKLLGKEYSDLGMPIKLSSSFIRKWITRKKVLIVLDDVNDSEQTKFL 310

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G R+ +  GSRII+TSRD+ +LK  G  E+Y+   LNY  A QLF ++AFK   P +  
Sbjct: 311 VGARDIYSPGSRIIMTSRDKQILKNGGA-EIYEVKKLNYHNAFQLFILRAFKENPPAEAL 369

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           ++++   + Y  G+PLAL+VLGS L  +++ EWR  L++LE     +I ++L+ISFD L 
Sbjct: 370 MEVTRMAVEYGQGIPLALKVLGSTLCDKNIKEWRDHLKKLEGISDKKIQNVLRISFDDLD 429

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           E EK+IFLDIACFFK  D++ V + L   G   + GIR+L +K LITV N  + MHDLLQ
Sbjct: 430 EDEKEIFLDIACFFKSEDKNEVESILSSFGRSAITGIRILQDKSLITVSNEKIEMHDLLQ 489

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTEL-VEGIVLDNYHHENEVYLCAS 358
           ++G+ IV+++  ++  KRSRLW  +++ H+LT   G  + VE I LD     +   +  S
Sbjct: 490 QMGRDIVRQEGVKDPRKRSRLWNPQDIYHLLTNDLGKNISVESISLDMSQIRD---IELS 546

Query: 359 AKAFSKMTNLRLL-----------------KICN------LQLPNGLEYLSNRLRLLGWR 395
             AF +M+ L+ L                 K+C+      + L   L +L N LR L W 
Sbjct: 547 PAAFEEMSKLKFLRLHTTCLEPGFSYYQQNKVCHPCKRTKISLSEELSFLPNGLRYLYWY 606

Query: 396 GYPLKFLPSNLQMDKTIEIYMCYSRIGEL 424
            YP K LP +   D  +++++ +S + +L
Sbjct: 607 EYPSKSLPLSFCPDNLVQLHLRHSHVQQL 635


>gi|297741028|emb|CBI31340.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  291 bits (744), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 161/332 (48%), Positives = 223/332 (67%), Gaps = 9/332 (2%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           + SR +KLR L+   S DVRM+GICGMGG+GKTT+AR +Y  +S++FEA  FL+   +  
Sbjct: 75  IQSRIQKLRMLLCLQSDDVRMVGICGMGGIGKTTLARAIYSQVSNQFEACSFLEIANDFK 134

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            +  L SL  +LLSQLL+  +  I     G   + +RL  +KVL+V+D+V ++  L+ LA
Sbjct: 135 EQD-LTSLAEKLLSQLLQEENLKI----KGSTSIKARLHSRKVLVVLDNVNNLTILEHLA 189

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           GN++WFG GSRII+T+RD+ LL  H VD  Y+    N DEA +     + K Y+ L+  +
Sbjct: 190 GNQDWFGQGSRIIVTTRDQRLLIQHKVD-YYEVAEFNGDEAFEFLKHHSLK-YELLENDL 247

Query: 181 Q-LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           Q LS  II YA GLPLAL VLGS L G + DEWR  L +L+  P  EI ++L++S+D L 
Sbjct: 248 QELSREIIFYAKGLPLALRVLGSLLFGMNKDEWRDYLVKLKSTPNIEIQEVLRLSYDRLD 307

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLL 298
           + EK IFLDIACFFKG D+D+V   L+GCGF    GI+ LI K LIT++  N L MHDL+
Sbjct: 308 DEEKNIFLDIACFFKGEDKDHVVEILKGCGFSAKCGIKTLINKSLITINFANKLEMHDLI 367

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVL 330
           QE+G+ IV+++ P+E  +RSRLW+ E++  VL
Sbjct: 368 QEMGKGIVRQECPKEPERRSRLWEHEDIFDVL 399


>gi|105922285|gb|ABF81408.1| NBS type disease resistance protein [Populus trichocarpa]
          Length = 757

 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 175/369 (47%), Positives = 244/369 (66%), Gaps = 32/369 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI- 59
           +DSR + L   +D  +++   IGICGMGG+GKTT+ARV+YD I  +F+ S FL NVRE+ 
Sbjct: 137 IDSRLKVLNEYIDEQANETLFIGICGMGGMGKTTVARVMYDRIRWQFDGSCFLANVREVF 196

Query: 60  SSKGGLVSLQRQLLSQL---LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQL 116
           + K GL  LQ QLLS++   L  A +S       ID++  RL+ KKVLL++DDV D +QL
Sbjct: 197 AEKDGLCRLQEQLLSEISMELPTARDSSRR----IDLIKRRLRLKKVLLILDDVDDEEQL 252

Query: 117 QSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
           Q LA     FG+GSRIIITSR++++L +HGV  +Y+   LN  +AL LF+ KAFK  QP 
Sbjct: 253 QMLAAEHGSFGAGSRIIITSRNKYVLDSHGVTRIYEAEKLNDKDALMLFSWKAFKRDQPA 312

Query: 177 QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSE---------- 226
           ++  +LS +++ YA GLPLALEV+GS L  R + +W+S ++R+   P S+          
Sbjct: 313 EDLSELSKQVVGYANGLPLALEVIGSLLHKRGLRDWKSAIDRMNDIPDSQGQNISGGPGP 372

Query: 227 -------------ILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPV 273
                        I+D+L+ISFDGL ELEKKIFLDIACF KG  +D +T  L+ CGFH  
Sbjct: 373 LLTPLPSAPADRKIIDVLRISFDGLHELEKKIFLDIACFLKGMKKDRITRLLDSCGFHAD 432

Query: 274 IGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTES 333
           IG++ LIEK LI+V  + + MH+LLQ++G++IV+ +SPEE G+RSRL   ++VC  L +S
Sbjct: 433 IGMQALIEKSLISVSRDEIRMHNLLQKMGEEIVRCESPEEPGRRSRLCTYKDVCDALEDS 492

Query: 334 T-GTELVEG 341
           T  T L+ G
Sbjct: 493 THQTHLIIG 501


>gi|227438129|gb|ACP30554.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1035

 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 248/833 (29%), Positives = 403/833 (48%), Gaps = 89/833 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M +  E L  L+D  S++V ++GI GMGG+GKT+IA+ +YD IS  F A  F++N++ +S
Sbjct: 192 MKAHMEGLNHLLDLESNEVVVLGIWGMGGIGKTSIAKCLYDQISPRFRARCFIENIKSVS 251

Query: 61  SKGG--LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            +    L   Q+++L  +L   D S+W+V  G+                       Q+ +
Sbjct: 252 KEHDHDLKHFQKEMLCSILS-DDISLWSVEAGL----------------------AQVHA 288

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           LA  + WFG GSRIIIT+RD  LL T GV+ VY+ + LN  +AL++F   AF+   P   
Sbjct: 289 LAKEKNWFGPGSRIIITTRDMGLLNTCGVENVYEVNCLNDKDALKMFKQIAFEGPPPCDG 348

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSV--DEWRSTLERLEIEPPSEILDILQISFD 236
             QLS R  R + GLP A++    FL GR+   + W   L  LE       ++IL+IS++
Sbjct: 349 FEQLSIRATRLSHGLPSAIQAHALFLRGRTAAPEVWEEALTALESSLDENTMEILKISYE 408

Query: 237 GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWMH 295
           GL +  + +FL +AC F G+    + + L G      + IRVL EK LI +  N ++ MH
Sbjct: 409 GLPKPHQNVFLHVACLFNGDTLQRINSLLHGPIPQSSLWIRVLAEKSLIKISTNGSVIMH 468

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTE-STGTELVEGIVLDNYHHENEVY 354
            L++++ +++++  +      R  L   +++C+ LT    G E  E + L    H   + 
Sbjct: 469 KLVEQMAREMIRDDTSL---ARKFLRDPQDICYALTNFRDGGEQTECMSL----HSCNLA 521

Query: 355 LCASAKA--FSKMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
              S KA     M NL+ LK+          LQL      L   LRL  W  +PL+ LPS
Sbjct: 522 CAFSMKASVVGHMHNLKFLKVYKHVDSRESKLQLIPDQHLLPPSLRLFHWDAFPLRTLPS 581

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
           +      +E+ + +S +  LW G   L+ LK + ++ S++L ++PD +   +L++L LE 
Sbjct: 582 DADPYFLVELNLRHSDLRTLWSGTPMLESLKRLDVTGSKHLKQLPDLSRITSLDELALEH 641

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK-SLPTTISGLKCLS 523
           CTRL  I  S+   + L  L +     L +     + K   + ++    P     +  L 
Sbjct: 642 CTRLKGIPESIGKRSTLKKLKLSYYGGLRSALKFFIRKPTMQQHIGLEFPDAKVKMDALI 701

Query: 524 TLDVSGDLKFR---EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL 580
            + + GD+ F    +F    E++   S+  +  T+   L  S  L+S         C   
Sbjct: 702 NISIGGDISFEFCSKFRGTAEYVSFNSDQQIPVTSSMNLQQSPWLIS--------ECNRF 753

Query: 581 EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
             L +   + K     + S       FP+      DL EL L   +I+++PS +  + KL
Sbjct: 754 NSLSIMRFSHK-----ENSESFSFDSFPD----FPDLKELKLVNLNIRKIPSGVHGIHKL 804

Query: 641 ELLNLSDC--KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAV 698
           E +   D    +   LP ++++L  LKTL L  CFKL+ +P+ L Q+++L   +      
Sbjct: 805 EFIEKLDLSGNDFENLPEAMVSLTRLKTLWLRNCFKLKELPK-LTQVQTLTLTNCRN--- 860

Query: 699 PHSTSWYSYIPINLMRKSVALKLPS-LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKE 757
                         +R  V L   S   G   L +L L +CN +E  L   +     L  
Sbjct: 861 --------------LRSLVKLSETSEEQGRYCLLELCLENCNNVE-FLSDQLVYFIKLTN 905

Query: 758 LYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
           L LS + FV+LP+SI  L+ L+ + L +CK L+S+ +LP +++ +  +GC SL
Sbjct: 906 LDLSGHEFVALPSSIRDLTSLVTLCLNNCKNLRSVEKLPLSLQFLDAHGCDSL 958


>gi|297850156|ref|XP_002892959.1| hypothetical protein ARALYDRAFT_471969 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338801|gb|EFH69218.1| hypothetical protein ARALYDRAFT_471969 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 963

 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 248/830 (29%), Positives = 398/830 (47%), Gaps = 100/830 (12%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M +  E L   +D  S++V M+GI GMGG+GKT+IA+ +YD +S +F A  F +N++ +S
Sbjct: 187 MKAHMEGLNHRLDLESNEVLMVGIWGMGGIGKTSIAKCLYDQLSPKFPAHCFTENIKSVS 246

Query: 61  SKGG--LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
              G  L  LQ+++L  +L   D  +W+V  G   +  RL  ++V LV+D V  V Q+ +
Sbjct: 247 KDIGHDLKHLQKEMLCNIL-CDDIRLWSVEAGCQEIKKRLGNQRVFLVLDGVDKVSQVHA 305

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           LA ++ WFG GSRIIIT+RD  LL T GV+ VY+   L+  +AL +F   AF+   P   
Sbjct: 306 LAKDKNWFGPGSRIIITTRDMGLLNTCGVEIVYEVKCLDDKDALHMFKQIAFEGGLPPDS 365

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSV--DEWRSTLERLEIEPPSEILDILQISFD 236
             QLS R  R A GLP A++    FL GR+   D W   L  LE      I++IL+IS++
Sbjct: 366 FEQLSIRASRLAHGLPSAIQAYALFLRGRTATPDGWEEALSALESSLDENIMEILKISYE 425

Query: 237 GLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWMH 295
           GL +  + +FL + C F G+    +T+ L G      + IRVL EK  I +  N ++ MH
Sbjct: 426 GLPKPHQNVFLHVVCLFNGDTLQRITSLLHGPIPQSSLWIRVLAEKSFIKISTNGSVIMH 485

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
            L++++G++I++         R  L    E+   L    G E  E + L  +  E    L
Sbjct: 486 KLVEQMGREIIRDNMSL---ARKFLRDPMEIPDALAFRDGGEQTECMCL--HTCELTCVL 540

Query: 356 CASAKAFSKMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
              A    +M NL+ LK+          LQL    ++L   LRL  W  +PL+ LPS   
Sbjct: 541 SMEASVVGRMHNLKFLKVYKHVDYRESKLQLIPDQQFLPRSLRLFHWDAFPLRALPSGSD 600

Query: 408 MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
               +E+ + +S +  L   +  L  LK + ++ S+ L ++PD +   +LE+L+LE CTR
Sbjct: 601 PCFLVELNLRHSDLETLRTCM--LKSLKRLDVTGSKYLKQLPDLSSITSLEELLLEQCTR 658

Query: 468 LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDV 527
           L  I            +  +     + L  +    + + + L+  P     +  L  + +
Sbjct: 659 LDGIPEC---------IGKRSTLKKLKLSYRGGRTAQQHIGLE-FPDAKVKMDALINISI 708

Query: 528 SGDLKFR---EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
            GD+ F    +F    E++   SE H            I ++S ++         L+  P
Sbjct: 709 GGDISFEFCSKFRGYAEYVSFNSEQH------------IPVISTMI---------LQQAP 747

Query: 585 VTVSNLKCLRSL---KLSGCSKLKKFP-EIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
             +S      SL   + S     + F  +I     DL EL L   +I+ +PS I  L  L
Sbjct: 748 WVISECNRFNSLSIMRFSHKENGESFSFDIFPDFPDLKELKLVNLNIRRIPSGICHLELL 807

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
           E L+LS   +   LP ++ +L  LKTL L  CFKLE +P+ L Q+++L    ++   +  
Sbjct: 808 EKLDLSG-NDFENLPEAMNSLSRLKTLWLRNCFKLEELPK-LTQVQTLT---LTNFKMRE 862

Query: 701 STSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYL 760
            T + S+          ALK   +   C +                           L +
Sbjct: 863 DTVYLSF----------ALKTARVLNHCQI--------------------------SLVM 886

Query: 761 SKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
           S + F +LP SI  L+ L+ + L +CK+L+S+ ++P +++ +  +GC SL
Sbjct: 887 SSHDFETLPPSIRDLTSLVTLCLNNCKKLKSVERIPTSLQFLDAHGCDSL 936


>gi|238908352|emb|CAZ40338.1| putative disease resistance protein [Raphanus sativus]
          Length = 2100

 Score =  290 bits (743), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 208/620 (33%), Positives = 323/620 (52%), Gaps = 45/620 (7%)

Query: 21   MIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLA 80
             +GICG  G+GKTTIAR ++  +S  F+ + F++N+R   + G   + +  L  +L +L 
Sbjct: 1273 FVGICGPAGIGKTTIARALHSRLSSTFQHTCFMENLRGSCNSG---TDEYGLKLRLQELL 1329

Query: 81   DNSIWNVFDGIDM--LGS---RLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIIT 135
             + I+N  +G+ +  LG+   RL   KVL+V+DDV D++QL++LA +  WFG GSRII+T
Sbjct: 1330 LSKIFNQ-NGVKLFHLGAIKERLCDLKVLIVLDDVDDLQQLEALADDTNWFGDGSRIIVT 1388

Query: 136  SRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPL 195
            + D+ +L+ HG+   Y+       +A Q+F   AF+         +L  R+I+    LPL
Sbjct: 1389 TEDQEILEQHGISNTYRVDFPTQVDARQIFCRFAFRQLSAPHGFEKLVDRVIKLCSNLPL 1448

Query: 196  ALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKG 255
             L V+GS L  + VD+W   L+RLE     +I  +L++ ++ L + ++ +FL IACFF  
Sbjct: 1449 GLRVMGSSLRRKKVDDWEGILQRLENSFDQKIDAVLRVGYNSLHKDDQFLFLLIACFFNY 1508

Query: 256  NDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPEEL 314
             D D+V   L        +G++ L+ K LI +    T+ MH LLQ++G++ V  Q P   
Sbjct: 1509 KDDDHVKAMLVDSNLDVRLGLKNLVYKSLIQISAEGTIVMHKLLQQVGREAVHLQDPR-- 1566

Query: 315  GKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI- 373
             KR  L    ++C VL   +    V GI  D     N VY+  SA+ F +M +LR L I 
Sbjct: 1567 -KRQILIDSHQICDVLENDSDGTSVMGISFDTSTIPNGVYI--SAQGFRRMRDLRFLSIY 1623

Query: 374  -------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWK 426
                     + LP  + +    LRLL W  YP K LP  L+ +  +E+    S + +LW+
Sbjct: 1624 ETRRDPNVRVHLPEDMSF-PPLLRLLHWEVYPGKCLPHTLRPEHLVELCFVNSMLEQLWQ 1682

Query: 427  GIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNM 486
            G++ L  LK M LS S +L  +PD + A +L++L L GC  L EI  S+   +KL  L M
Sbjct: 1683 GVQPLTNLKKMDLSGSLSLKEVPDLSNATSLKRLNLTGCWSLVEIPSSIGDLHKLEELEM 1742

Query: 487  KDCTSLITLPGKILMKSLEKLNL---------KSLPTTISGLKCLSTLDVSGDLKFREFP 537
              C S+   P  + + SLE L +           LPT I  L       V G+   +EFP
Sbjct: 1743 NLCVSVQVFPTLLNLASLESLRMVGCWQLSKIPDLPTNIKSL-------VVGETMLQEFP 1795

Query: 538  EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
            E V    HL  L++ G+      L++ LL            ++E +P  + +   LR L 
Sbjct: 1796 ESVRLWSHLHSLNIYGSV-----LTVPLLETTSQEFSLAAATIERIPDWIKDFNGLRFLY 1850

Query: 598  LSGCSKLKKFPEIVRSMKDL 617
            ++GC+KL   PE+  S++ L
Sbjct: 1851 IAGCTKLGSLPELPPSLRKL 1870



 Score =  257 bits (656), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 214/701 (30%), Positives = 332/701 (47%), Gaps = 88/701 (12%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMI-GICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE- 58
           +++  +K++ L+     D  M  GICG  G+GKTTIAR ++  +S  F  + F++N+R  
Sbjct: 312 IEAHLDKMQSLLHLDDEDGAMFAGICGPAGIGKTTIARALHSRLSSSFHLTCFMENLRGS 371

Query: 59  ----ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
               +   G  + LQ  LLS++    D  I++    +  +  R+  +KVL+++DDV D++
Sbjct: 372 CNSGLDEYGLKLRLQELLLSKIFNQNDMRIYH----LGAIPQRMCDQKVLIILDDVDDLQ 427

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL++LA    WFG GSRI++T+ D+ LL+ HG++  Y       DEA ++F   AF+   
Sbjct: 428 QLEALADETNWFGDGSRIVVTTEDQELLEQHGINNTYYVDLPTDDEARKIFCRYAFRRSL 487

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
                  L  R     G LP  L V   F + R              +   +I  +L++ 
Sbjct: 488 TPYGFETLVERTTELCGKLPFGLRV--QFYAERK-------------KTTGKIDAVLRVG 532

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLW 293
           +D L E E+ +FL IA FF   D  +V   L        +G++ L  K L  + +   + 
Sbjct: 533 YDSLHENEQTLFLLIAIFFNYQDDGHVKTMLADTNLDVRLGLKTLAYKSLTKISSQGKIV 592

Query: 294 MHDLLQELGQQIVQRQSPE---------------ELGKRSRLWKEEEVCHVLTESTGTEL 338
           MH LLQ++G+Q VQRQ P                E  KR  L   +E+  VL   +G+  
Sbjct: 593 MHKLLQQVGRQAVQRQEPWKRRILIDPQEICDVLEPWKRQVLTDTDEIRDVLENDSGSRN 652

Query: 339 VEGIVLD--NYHHENEVYLCASAKAFSKMTNLRLLKI----CN----LQLPNGLEYLSNR 388
           + G+  D     H+ ++    SA+AF+ M NLR LK+    C+    + LP  +E+   R
Sbjct: 653 LMGVSFDMSTILHDMDI----SARAFTSMRNLRFLKVYKTRCDTNVRVHLPEDMEF-PPR 707

Query: 389 LRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRM 448
           LRLL W  YP KFLP     +  +E+Y+  + + +LW+G + L  LK M L     L  +
Sbjct: 708 LRLLHWEVYPRKFLPRTFCTEHLVELYLRDTELEQLWEGTQPLTNLKKMFLGSCLYLKEL 767

Query: 449 PDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL- 507
           PD   A NLEKL L+ C  L EIH S+   +KL  L +  C +L  +P    + SLE   
Sbjct: 768 PDLAKATNLEKLRLDRCRSLVEIHSSVGNLHKLESLEVAFCYNLQVVPNLFNLASLESFM 827

Query: 508 -----NLKSLP---TTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGL 559
                 L+SLP   TTI+ L    TL         EF E +    HL  L + G      
Sbjct: 828 MVGCYQLRSLPDISTTITELSIPDTL-------LEEFTEPIRLWSHLQRLDIYGC----- 875

Query: 560 PLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSE 619
                   G  L  +++  ++E +P  + +L+ L  L +  C KL   PE+ RS   L+ 
Sbjct: 876 --------GENLEQVRSDIAVERIPDCIKDLQRLEELTIFCCPKLVSLPELPRS---LTL 924

Query: 620 LFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           L +      E  +   L +++E L+  +C  L R    +I 
Sbjct: 925 LIVYECDSLETLAPFPLGSEIEALSFPECFRLDREARRVIT 965



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 154/347 (44%), Gaps = 69/347 (19%)

Query: 544  EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            EHL EL    + +  L   ++ L+ L  ++L    SL+ +P  +SN   L+ L L+GC  
Sbjct: 1665 EHLVELCFVNSMLEQLWQGVQPLTNLKKMDLSGSLSLKEVP-DLSNATSLKRLNLTGC-- 1721

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
                                  S+ E+PSSI  L KLE L ++ C ++   P +++ L S
Sbjct: 1722 ---------------------WSLVEIPSSIGDLHKLEELEMNLCVSVQVFP-TLLNLAS 1759

Query: 664  LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPS 723
            L++L + GC++L  +P+    I+SL   +      P S   +S+                
Sbjct: 1760 LESLRMVGCWQLSKIPDLPTNIKSLVVGETMLQEFPESVRLWSH---------------- 1803

Query: 724  LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIEL 783
                  L  LN+    L    L +      + +E  L+  +   +P  I   + L  + +
Sbjct: 1804 ------LHSLNIYGSVLTVPLLET------TSQEFSLAAATIERIPDWIKDFNGLRFLYI 1851

Query: 784  EDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAF 843
              C +L SLP+LPP++R++ V+ C SL T+      C + +T     D L         F
Sbjct: 1852 AGCTKLGSLPELPPSLRKLIVDNCESLETVCFP---CDTPTT-----DYLYFPN----CF 1899

Query: 844  SMLREYLEAVSNTRQHLSVVVPGSEIP--EWFMYQNEGSSITVTRPS 888
             + +E    +  T+Q L    PG E+P  E+  +++ GSS+T+ RP+
Sbjct: 1900 MLCQEAKRVI--TQQSLRAYFPGKEMPAAEFDDHRSFGSSLTIIRPA 1944



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 162/389 (41%), Gaps = 69/389 (17%)

Query: 514  TTISGLKCLSTLDVSGDLKFR-EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLL 572
            T++  L+ L       D   R   PE +E    L  LH E    + LP +      LV L
Sbjct: 675  TSMRNLRFLKVYKTRCDTNVRVHLPEDMEFPPRLRLLHWEVYPRKFLPRTF-CTEHLVEL 733

Query: 573  NLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPS 632
             L++   LE L      L  L+ + L  C  LK+ P++ ++                   
Sbjct: 734  YLRDT-ELEQLWEGTQPLTNLKKMFLGSCLYLKELPDLAKA------------------- 773

Query: 633  SIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELD 692
                 T LE L L  C++LV + SS+  L  L++L ++ C+ L+ VP  L  + SLE   
Sbjct: 774  -----TNLEKLRLDRCRSLVEIHSSVGNLHKLESLEVAFCYNLQVVP-NLFNLASLESFM 827

Query: 693  ISG----TAVPHSTSWYS--YIPINLMRK-SVALKLPSLSGLCSLRKLNLTDCNLMEGAL 745
            + G     ++P  ++  +   IP  L+ + +  ++L S      L++L++  C      +
Sbjct: 828  MVGCYQLRSLPDISTTITELSIPDTLLEEFTEPIRLWS-----HLQRLDIYGCGENLEQV 882

Query: 746  PSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVN 805
             SDI              +   +P  I  L +L  + +  C +L SLP+LP ++  + V 
Sbjct: 883  RSDI--------------AVERIPDCIKDLQRLEELTIFCCPKLVSLPELPRSLTLLIVY 928

Query: 806  GCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVP 865
             C SL TL        +   + + +++L         F + RE    ++   Q   V +P
Sbjct: 929  ECDSLETL--------APFPLGSEIEALSF----PECFRLDREARRVITQL-QSSWVCLP 975

Query: 866  GSEIPEWFMYQNEGSSITVTRPSNLYNKK 894
            G  IP  F ++  G+ + +   SN Y  K
Sbjct: 976  GRNIPAEFHHRVIGNFLAIC--SNAYRFK 1002


>gi|356506545|ref|XP_003522040.1| PREDICTED: probable WRKY transcription factor 19-like [Glycine max]
          Length = 1024

 Score =  290 bits (742), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 221/630 (35%), Positives = 332/630 (52%), Gaps = 39/630 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D +   L  L+   S DV +IGI G+GG+GKTTIA+ V+  +  E+E+  F  NV+E  
Sbjct: 172 IDKQVAHLESLLKQESKDVCVIGIWGVGGIGKTTIAQEVFSKLYLEYESCCFFANVKEEI 231

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            + G++SL+ +L + +L+   N I         +   + +KKVL+V+DDV D +QL+ L 
Sbjct: 232 RRLGVISLKEKLFASILQKYVN-IKTQKGLSSSIKKMIGQKKVLIVLDDVNDSEQLEELF 290

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G  +W+GSGSRIIIT+RD  +L  + V E+Y   GL+  EA QLF + AF       E  
Sbjct: 291 GTPDWYGSGSRIIITTRDIKVLIANKVPEIYHVGGLSSCEAFQLFKLNAFNQGDLEMEFY 350

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS R++ YA G+PL L++L   L G+  + W+S LE+L+    + + D +++SFD L  
Sbjct: 351 ELSKRVVDYAKGIPLVLKILAHLLCGKDKEVWKSQLEKLKGIKSNNVHDFVKLSFDDLHH 410

Query: 241 LEKKIFLDIACFFKGNDR--------DYVTNFLEGCGFHP--VIGIRVLIEKCLITV-HN 289
            E++I LD+ACF +  +         D +   L  CG H   V+G+  L EK LIT+  +
Sbjct: 411 EEQEILLDLACFCRRANMTENFNMKVDSINILLGDCGSHNAVVVGLERLKEKSLITISED 470

Query: 290 NTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHH 349
           N + MHD +QE+  +IV ++S  +LG RSRLW   E+  VL    GT+ +  I       
Sbjct: 471 NVVSMHDTVQEMAWEIVCQES-NDLGNRSRLWDPIEIYDVLKNDKGTKAIRSITTPLSTL 529

Query: 350 ENEVYLCASAKAFSKMTNLRLLKICN--LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
           +N   L     AF +M+NL+ L   N    LP GL+ L N LR L W  YPL  LP    
Sbjct: 530 KN---LKLRPDAFVRMSNLQFLDFGNNSPSLPQGLQSLPNELRYLHWMHYPLTCLPEQFS 586

Query: 408 MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
            +K + + +  SR+ +LW  +K+L  LK + L     L  +PDF+ + NL+ L +   + 
Sbjct: 587 AEKLVILDLSCSRVEKLWHEVKNLVNLKNVKLRWCVLLNELPDFSKSTNLKVLDVSCSSG 646

Query: 468 LYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDV 527
           L  +HPS+   +KL  L++  C+SLI                    ++  G         
Sbjct: 647 LTSVHPSIFSLHKLEKLDLSGCSSLIKF------------------SSDDGHLSSLLYLN 688

Query: 528 SGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV 587
             D +  E  E     E++ EL L G  I  LPLS   L  L +L+L     +E LP  +
Sbjct: 689 LSDCE--ELREFSVTAENVVELDLTGILISSLPLSFGSLRKLEMLHLIR-SDIESLPTCI 745

Query: 588 SNLKCLRSLKLSGCSKLKKFPEIVRSMKDL 617
           +NL  LR L LS CS L   P++  S++ L
Sbjct: 746 NNLTRLRYLDLSCCSNLCILPKLPPSLETL 775



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 201/487 (41%), Gaps = 116/487 (23%)

Query: 569  LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS-I 627
            LV+L+L +C  +E L   V NL  L+++KL  C  L + P+  +S  +L  L +  +S +
Sbjct: 590  LVILDL-SCSRVEKLWHEVKNLVNLKNVKLRWCVLLNELPDFSKST-NLKVLDVSCSSGL 647

Query: 628  KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
              V  SI  L KLE L+LS C +L++  S    L SL  LNLS C +L     T    E+
Sbjct: 648  TSVHPSIFSLHKLEKLDLSGCSSLIKFSSDDGHLSSLLYLNLSDCEELREFSVT---AEN 704

Query: 688  LEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPS 747
            + ELD++G  +                                             +LP 
Sbjct: 705  VVELDLTGILI--------------------------------------------SSLPL 720

Query: 748  DIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGC 807
              G+L  L+ L+L ++   SLPT I +L++L  ++L  C  L  LP+LPP++  +  + C
Sbjct: 721  SFGSLRKLEMLHLIRSDIESLPTCINNLTRLRYLDLSCCSNLCILPKLPPSLETLHADEC 780

Query: 808  ASLVTLL---DALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVV 864
             SL T+L    A++  + +   +   + LK L   SL    L   +  +    QHLS  +
Sbjct: 781  ESLETVLFPSTAVEQFEENRKRVEFWNYLK-LDEFSLMAIELNAQINVMKFAYQHLSAPI 839

Query: 865  -----------------------PGSEIPEWFMYQNEGSSITV----TRPSNLYNKKKLV 897
                                   PGS +PEW  Y+     + +      P++L       
Sbjct: 840  LDHVENYNDYKDLHDSYQAVYMYPGSNVPEWLAYKTRKDYVIIDLSSAPPAHL------- 892

Query: 898  GYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHG-------IYGIGFRDKFGQAGSDHL 950
            G+  C +       +    F   P  Q +  I +G          I     +    SDH+
Sbjct: 893  GFIFCFIL-----DKDTEEFLD-PALQFSISISNGENECKRDSVEIQTSGPYSMIYSDHV 946

Query: 951  WLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWL--GQGLEV-KMCGLHP----VYM 1003
             +LY  R +CY     L + L+      + VS   WL  G+  EV K  G+ P    VY 
Sbjct: 947  CVLYDKRCSCY-----LNNRLKSLAKFKIKVS---WLTDGERWEVLKGFGVSPINTSVYH 998

Query: 1004 DEVEELD 1010
            + V++++
Sbjct: 999  NFVQQME 1005


>gi|357485385|ref|XP_003612980.1| NBS resistance protein [Medicago truncatula]
 gi|355514315|gb|AES95938.1| NBS resistance protein [Medicago truncatula]
          Length = 996

 Score =  290 bits (741), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 228/642 (35%), Positives = 337/642 (52%), Gaps = 67/642 (10%)

Query: 11  LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQR 70
           L+   S  VR+IGI GMGG+GKTTIA  +++ I  E+E   FL  V E   + G+  L+ 
Sbjct: 358 LLHQESEKVRVIGIWGMGGIGKTTIAEEIFNQICSEYEGCCFLAKVSEELGRHGIAFLKE 417

Query: 71  QLLSQLLKLADNSIWNVFDGIDMLGSRLQRK----KVLLVIDDVVDVKQLQSLAGNREWF 126
           +L+S LL   D  I    D  + L S +QR+    KVL+V+DDV +  QL+ L G  +WF
Sbjct: 418 KLVSTLLA-EDVKI----DSSNGLPSYIQRRIGHMKVLIVLDDVTEEGQLEMLFGTLDWF 472

Query: 127 GSGSRIIITSRDEHLLKTHGV---DEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLS 183
            S SRIIIT+RD+ +L  + V   D +Y+   L+  EAL LFN+ AFK      E   +S
Sbjct: 473 RSDSRIIITTRDKQVLIANEVVDDDALYEVRVLDSSEALALFNLNAFKQSHLENEFYDVS 532

Query: 184 ARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEK 243
            R++ YA G+PL L+VL   L G++ + W S L++L+  P  ++ D++++SFD L  LE+
Sbjct: 533 KRVVDYAKGIPLVLKVLAHMLRGKNKELWESQLDKLKRLPIQKVHDVMRLSFDDLDRLEQ 592

Query: 244 KIFLDIACFFKGND--RDYVTNFLEG--CGFHPVIGIRVLIEKCLITV-HNNTLWMHDLL 298
           K FLDIACFF G     +Y+   L+         IG+  L +K LIT+  +N + MHD+L
Sbjct: 593 KYFLDIACFFNGMSLKVEYMKLLLKDYESDNSVAIGLERLKDKALITISKDNVISMHDIL 652

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           QE+G+++V+++S E+  K SRLW  + +  VL    GT+ +  I +D         L  S
Sbjct: 653 QEMGREVVRQESSEDPRKCSRLWDPDIIYDVLKNDKGTDAIRSISVDLSAIRK---LKLS 709

Query: 359 AKAFSKMTNLRLLKICNL----QLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
              F KMTNL+ L   ++    +LP GL++    LR L W  YPLK  P    +D  + +
Sbjct: 710 PPVFDKMTNLKFLYFHDIDGLDRLPQGLQFFPTDLRYLYWMHYPLKSFPEKFSVDNLVIL 769

Query: 415 YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
            + YS + +LW G++ L  LK + L HS+ L  +PDF+ A NL+ L +  C RL +    
Sbjct: 770 GLPYSLVEKLWCGVQDLVNLKQVTLCHSKYLKELPDFSNATNLKVLNMRWCNRLID---- 825

Query: 475 LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFR 534
                         C SL T      + SL+ LNL          K LS   V+      
Sbjct: 826 ------------NFCFSLATFTRNSHLTSLKYLNL-------GFCKNLSKFSVT------ 860

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
                   +E++ EL L   +I+ LP S    S L +L L   + +E +P ++ NL   R
Sbjct: 861 --------LENIVELDLSCCSIKALPSSFGCQSKLEVLVLLGTK-IESIPSSIINLTRRR 911

Query: 595 SLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEV--PSSI 634
            L +  CSKL   P +  S   L  L ++  S+K V  PS +
Sbjct: 912 VLDIQFCSKLLAVPVLPSS---LETLIVECKSLKSVVFPSKV 950



 Score = 46.6 bits (109), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 57/109 (52%), Gaps = 11/109 (10%)

Query: 566 LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGT 625
           L+ L  LNL  C++L    VT+ N+     L LS CS +K  P        L  L L GT
Sbjct: 840 LTSLKYLNLGFCKNLSKFSVTLENIV---ELDLSCCS-IKALPSSFGCQSKLEVLVLLGT 895

Query: 626 SIKEVPSSIELLTKLELLNLSDCKNLVR---LPSS----IIALKSLKTL 667
            I+ +PSSI  LT+  +L++  C  L+    LPSS    I+  KSLK++
Sbjct: 896 KIESIPSSIINLTRRRVLDIQFCSKLLAVPVLPSSLETLIVECKSLKSV 944



 Score = 43.9 bits (102), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 135/283 (47%), Gaps = 40/283 (14%)

Query: 544 EHLSELHLEGTAIRGLPLS---IELLSGLVLLNLKNCRSLEILPVTV----SNLKCLRSL 596
           + +  + ++ +AIR L LS    + ++ L  L   +   L+ LP  +    ++L+ L  +
Sbjct: 691 DAIRSISVDLSAIRKLKLSPPVFDKMTNLKFLYFHDIDGLDRLPQGLQFFPTDLRYLYWM 750

Query: 597 KLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPS 656
                  LK FPE   S+ +L  L L  + ++++   ++ L  L+ + L   K L  LP 
Sbjct: 751 HYP----LKSFPEKF-SVDNLVILGLPYSLVEKLWCGVQDLVNLKQVTLCHSKYLKELPD 805

Query: 657 SIIALKSLKTLNLSGCFKL-ENVPETLGQIESLEELDISGTAVPHSTSWYSYIPI----N 711
              A  +LK LN+  C +L +N   +L             T   H TS   Y+ +    N
Sbjct: 806 FSNA-TNLKVLNMRWCNRLIDNFCFSLATF----------TRNSHLTS-LKYLNLGFCKN 853

Query: 712 LMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTS 771
           L + SV L+        ++ +L+L+ C++   ALPS  G    L+ L L      S+P+S
Sbjct: 854 LSKFSVTLE--------NIVELDLSCCSI--KALPSSFGCQSKLEVLVLLGTKIESIPSS 903

Query: 772 ITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLL 814
           I +L++   ++++ C +L ++P LP ++  + V  C SL +++
Sbjct: 904 IINLTRRRVLDIQFCSKLLAVPVLPSSLETLIVE-CKSLKSVV 945


>gi|18033509|gb|AAL57179.1|AF345652_1 functional resistance protein KR2 [Glycine max]
          Length = 457

 Score =  290 bits (741), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 172/413 (41%), Positives = 259/413 (62%), Gaps = 16/413 (3%)

Query: 5   CEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKG 63
            EK+R L+++GSSD + MIGI GMGG+GK+T+AR VY+L +  F+ S FL NVRE S++ 
Sbjct: 39  VEKIRKLLEAGSSDAISMIGIHGMGGVGKSTLARAVYNLHTDHFDDSCFLQNVREESNRH 98

Query: 64  GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNR 123
           GL  LQ  LLSQ+LK   N + +   G  M+ ++L+ KKVLLV+DDV + KQLQ++ G  
Sbjct: 99  GLKRLQSILLSQILKKEIN-LASEQQGTSMIKNKLKGKKVLLVLDDVDEHKQLQAIVGKS 157

Query: 124 EW----FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL-QE 178
            W    FG+   +IIT+RD+ LL ++GV   ++   L+  +A+QL   KAFKTY  + Q 
Sbjct: 158 VWSESEFGTRLVLIITTRDKQLLTSYGVKRTHEVKELSKKDAIQLLKRKAFKTYDEVDQS 217

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             Q+   ++ +  GLPLALEV+GS L G+S+ EW S +++ +  P  EIL IL++SFD L
Sbjct: 218 YNQVLNDVVTWTSGLPLALEVIGSNLFGKSIKEWESAIKQYQRIPNKEILKILKVSFDAL 277

Query: 239 QELEKKIFLDIACFFKGND----RDYVTNFLEGC-GFHPVIGIRVLIEKCLITVHNNTLW 293
           +E EK +FLDI C  KG       D + +  + C  +H    I VL++K LI + ++ + 
Sbjct: 278 EEEEKSVFLDITCCLKGYKCREIEDILHSLYDNCMKYH----IGVLVDKSLIQISDDRVT 333

Query: 294 MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
           +HDL++ +G++I +++SP+E GKR RLW  +++  VL +++GT  V+ I LD    + + 
Sbjct: 334 LHDLIENMGKEIDRQKSPKETGKRRRLWLLKDIIQVLKDNSGTSEVKIICLDFPISDKQE 393

Query: 354 YLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNL 406
            +  +  AF +M NL+ L I N  L  G  YL   LR+L W  +P   LPS+ 
Sbjct: 394 TIEWNGNAFKEMKNLKALIIRNGILSQGPNYLPESLRILEWHRHPSHCLPSDF 446


>gi|297825393|ref|XP_002880579.1| hypothetical protein ARALYDRAFT_900967 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326418|gb|EFH56838.1| hypothetical protein ARALYDRAFT_900967 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1158

 Score =  290 bits (741), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 239/729 (32%), Positives = 349/729 (47%), Gaps = 109/729 (14%)

Query: 2   DSRCEKL--RFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + R E+L  RF  D   +  ++ GI GM G+GKT +A+  +D           L  + E 
Sbjct: 212 EQRLEQLEERFGFDPAVT--QIFGIVGMTGIGKTILAQKHFDKWKKRLAIDKMLLGIHER 269

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S                 K  + S W + D       ++ ++K  + +DDV +  Q+QSL
Sbjct: 270 S-----------------KNEEGSDWVIKDD-----DKIFKRKSFIFLDDVSEKTQIQSL 307

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAF--KTYQPLQ 177
             N      GS+I+IT+RD+  +    V + Y   GLN  EALQLF+  AF  + Y P Q
Sbjct: 308 LDNLHRVKKGSKIVITTRDKSWI-GEVVHDTYVVPGLNEKEALQLFHYHAFHNQDYTPTQ 366

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
              +LS + + YAGG PLAL  LG  L G++   W + +E L       I   L+IS+D 
Sbjct: 367 NITKLSKKFVDYAGGNPLALVELGKELCGKNETLWETRIETLPHCCNENIKRELKISYDK 426

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHP------VIGIRVLIEKCLITVHNNT 291
           L + +K  FLDIACFF+  D D + N L     H       VIG   L  K +I+V    
Sbjct: 427 LTDQQKDAFLDIACFFRSEDEDCLKNLLASEVSHESDEAAGVIGD--LAHKFMISVSAGQ 484

Query: 292 LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTE--LVEGIVLDNYHH 349
           + M D+L  LG+++    S + L ++SRLW    V   L      E   V GI+LD    
Sbjct: 485 IEMPDILCSLGKELGLFASADNL-RKSRLWDHNAVSKALAGKEENEDITVRGILLDVSKL 543

Query: 350 ENEVYLCASAKAFSKMTNLRLLKI----------------CNLQLPNGLEYLSNRLRLLG 393
           + E+ +  +    + M NLR LKI                C + +P+ LE     +R   
Sbjct: 544 KEEIAI--ATNKLTLMPNLRYLKIFDSSCPRQCKVVEAVECKVYVPDELELCLKNIRYFH 601

Query: 394 WRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTG 453
           W  +P   LP +   +  +++ + YS+I  +W  +K    LK + LSHS  LI +     
Sbjct: 602 WLKFPSMELPPDFNPENLVDLRLPYSKIERVWDDVKDTPNLKWVDLSHSTKLIDLSALWK 661

Query: 454 APNLEKLILEGCTRLYEIHPSLLLHNK-LIILNMKDCTSLITLPGKILMKSLEKLNLKSL 512
           A +LE+L LEGCT L E+ P    + K L  LN++ CTSL  LP                
Sbjct: 662 AESLERLNLEGCTNL-ELFPKDEGNMKSLAFLNLRGCTSLSFLP---------------- 704

Query: 513 PTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLL 572
              +    CL TL +SG   F +F    +++E+L   HL+GT I  LP +I  L  L++L
Sbjct: 705 --EMENFDCLKTLILSGCTSFEDFQVKSKNLEYL---HLDGTEITDLPQTIVELQRLIVL 759

Query: 573 NLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPS 632
           NLK+C+ L+ LP  +  LK L  L LSGCS+L+ FPEI  +M++L  L LDGT I+++P 
Sbjct: 760 NLKDCKMLDTLPDCLGKLKALEELILSGCSRLRSFPEIKDNMENLQILLLDGTKIRDLPK 819

Query: 633 SIELLTKLELLNLSDCKNLVRLPS----------------SIIALKS-------LKTLNL 669
            +     L   N  D  NL R PS                 II+L+S       LK ++L
Sbjct: 820 IL-----LRCANSVDQMNLQRSPSMSGLSLLRRLCLSRNEMIISLQSSISDLYHLKWIDL 874

Query: 670 SGCFKLENV 678
             C KL+++
Sbjct: 875 KYCTKLQSI 883



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 185/400 (46%), Gaps = 71/400 (17%)

Query: 544  EHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
            E L  L+LEG T +   P     +  L  LNL+ C SL  LP  + N  CL++L LSGC+
Sbjct: 663  ESLERLNLEGCTNLELFPKDEGNMKSLAFLNLRGCTSLSFLP-EMENFDCLKTLILSGCT 721

Query: 603  KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
              + F   V+S K+L  L LDGT I ++P +I  L +L +LNL DCK L  LP  +  LK
Sbjct: 722  SFEDFQ--VKS-KNLEYLHLDGTEITDLPQTIVELQRLIVLNLKDCKMLDTLPDCLGKLK 778

Query: 663  SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
            +L+ L LSGC +L + PE    +E+L+ L + GT +         +P  L+R +      
Sbjct: 779  ALEELILSGCSRLRSFPEIKDNMENLQILLLDGTKIRD-------LPKILLRCAN----- 826

Query: 723  SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIE 782
                  S+ ++NL          PS  G     +         +SL +SI+ L  L  I+
Sbjct: 827  ------SVDQMNLQRS-------PSMSGLSLLRRLCLSRNEMIISLQSSISDLYHLKWID 873

Query: 783  LEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDAL-------------------KLCKSD 823
            L+ C +LQS+  LPPN++ +  + C SL T+   L                   KL  + 
Sbjct: 874  LKYCTKLQSISMLPPNLQCLDAHDCTSLKTVASPLARPLATEQVPSSFIFTNCQKLEHAA 933

Query: 824  STMIACL--DSLKLLG------NKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMY 875
               I C   +  +LL       NK L F  L             ++   PGSE+P+WF +
Sbjct: 934  KNEITCYGHNKGRLLSKTLNRHNKGLCFEAL-------------VATCFPGSEVPDWFGH 980

Query: 876  QNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNN 915
            ++ G+ +    P + +++   VG A+C +    +    NN
Sbjct: 981  KSSGAVLEPELPRH-WSENGFVGIALCAIVSFEEQKIRNN 1019



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 41/236 (17%)

Query: 615 KDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFK 674
           ++L +L L  + I+ V   ++    L+ ++LS    L+ L S++   +SL+ LNL GC  
Sbjct: 617 ENLVDLRLPYSKIERVWDDVKDTPNLKWVDLSHSTKLIDL-SALWKAESLERLNLEGCTN 675

Query: 675 LENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLN 734
           LE  P+  G ++SL  L++ G          S++P   M     LK   LSG  S     
Sbjct: 676 LELFPKDEGNMKSLAFLNLRGCTS------LSFLP--EMENFDCLKTLILSGCTSFEDFQ 727

Query: 735 LTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ 794
           +   N               L+ L+L       LP +I  L +L+ + L+DCK L +LP 
Sbjct: 728 VKSKN---------------LEYLHLDGTEITDLPQTIVELQRLIVLNLKDCKMLDTLPD 772

Query: 795 LPPNIRQVR---VNGCASL--------------VTLLDALKLCKSDSTMIACLDSL 833
               ++ +    ++GC+ L              + LLD  K+      ++ C +S+
Sbjct: 773 CLGKLKALEELILSGCSRLRSFPEIKDNMENLQILLLDGTKIRDLPKILLRCANSV 828


>gi|351722777|ref|NP_001235720.1| resistance protein KR3 [Glycine max]
 gi|24637543|gb|AAN63807.1| resistance protein KR3 [Glycine max]
          Length = 636

 Score =  289 bits (740), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 172/413 (41%), Positives = 259/413 (62%), Gaps = 16/413 (3%)

Query: 5   CEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKG 63
            EK+R L+++GSSD + MIGI GMGG+GK+T+AR VY+L +  F+ S FL NVRE S++ 
Sbjct: 218 VEKIRKLLEAGSSDAISMIGIHGMGGVGKSTLARAVYNLHTDHFDDSCFLQNVREESNRH 277

Query: 64  GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNR 123
           GL  LQ  LLSQ+LK   N + +   G  M+ ++L+ KKVLLV+DDV + KQLQ++ G  
Sbjct: 278 GLKRLQSILLSQILKKEIN-LASEQQGTSMIKNKLKGKKVLLVLDDVDEHKQLQAIVGKS 336

Query: 124 EW----FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL-QE 178
            W    FG+   +IIT+RD+ LL ++GV   ++   L+  +A+QL   KAFKTY  + Q 
Sbjct: 337 VWSESEFGTRLVLIITTRDKQLLTSYGVKRTHEVKELSKKDAIQLLKRKAFKTYDEVDQS 396

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
             Q+   ++ +  GLPLALEV+GS L G+S+ EW S +++ +  P  EIL IL++SFD L
Sbjct: 397 YNQVLNDVVTWTSGLPLALEVIGSNLFGKSIKEWESAIKQYQRIPNKEILKILKVSFDAL 456

Query: 239 QELEKKIFLDIACFFKGND----RDYVTNFLEGC-GFHPVIGIRVLIEKCLITVHNNTLW 293
           +E EK +FLDI C  KG       D + +  + C  +H    I VL++K LI + ++ + 
Sbjct: 457 EEEEKSVFLDITCCLKGYKCREIEDILHSLYDNCMKYH----IGVLVDKSLIQISDDRVT 512

Query: 294 MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
           +HDL++ +G++I +++SP+E GKR RLW  +++  VL +++GT  V+ I LD    + + 
Sbjct: 513 LHDLIENMGKEIDRQKSPKETGKRRRLWLLKDIIQVLKDNSGTSEVKIICLDFPISDKQE 572

Query: 354 YLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNL 406
            +  +  AF +M NL+ L I N  L  G  YL   LR+L W  +P   LPS+ 
Sbjct: 573 TIEWNGNAFKEMKNLKALIIRNGILSQGPNYLPESLRILEWHRHPSHCLPSDF 625


>gi|224085411|ref|XP_002307568.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222857017|gb|EEE94564.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 541

 Score =  289 bits (739), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 147/331 (44%), Positives = 226/331 (68%), Gaps = 1/331 (0%)

Query: 3   SRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK 62
           SR +++  L+     DVR++GI GMGG+GKTT+A+ VY+L+ HEFE S FL+NVR+ S  
Sbjct: 196 SRAKEVISLLGEKLVDVRIVGIYGMGGIGKTTVAKKVYNLVFHEFEGSCFLENVRKESIS 255

Query: 63  GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGN 122
            G+  LQRQLLS+ LK     I N+  G++++  RL RK++ +V+DD+ +++QL  + GN
Sbjct: 256 KGIACLQRQLLSETLKRKHEKIDNISRGLNVIRDRLHRKRIFIVLDDIDELEQLNKILGN 315

Query: 123 REWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQL 182
            +W   GSR+IIT+R + LL+   +   Y+   LN D++LQL  + AF  + P+   +  
Sbjct: 316 FDWLFPGSRVIITTRIKDLLQPSELYLQYEVEELNNDDSLQLLRLHAFNEHHPVDNYMDC 375

Query: 183 SARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELE 242
             RI+ Y  G+PLALEVLGS L G++++ W S LE+L++    +I + L+IS D L + E
Sbjct: 376 MRRIVSYVRGIPLALEVLGSSLCGQTINVWNSKLEKLKVIGNGDIHNKLKISNDSLDDTE 435

Query: 243 KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQEL 301
           K IFLDIACFF G ++DY+ + LE CGF P  GI  L+ +C++ V  +N L MHDLL+++
Sbjct: 436 KFIFLDIACFFIGFNKDYIMSILEDCGFFPADGINTLMRRCIVKVGPDNKLSMHDLLRDM 495

Query: 302 GQQIVQRQSPEELGKRSRLWKEEEVCHVLTE 332
           G++IV+++S  + G+RSRLW++E+V  V+T+
Sbjct: 496 GREIVRQESSTDPGERSRLWRQEDVIDVITD 526


>gi|296081130|emb|CBI18156.3| unnamed protein product [Vitis vinifera]
          Length = 426

 Score =  289 bits (739), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 164/336 (48%), Positives = 230/336 (68%), Gaps = 2/336 (0%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD R ++L  L+   S DVRM+GI G+GG+GKTTI +V Y+  SH+F++S FL N+REI 
Sbjct: 54  MDFRLKRLNSLISVDSKDVRMVGIYGIGGIGKTTITKVFYNQNSHQFQSSSFLANIREIF 113

Query: 61  SKG-GLVSLQRQLLSQLLKLADNSIWNVFD-GIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            +  GL+ LQ++LL     L  N     FD GI+M+ SRL  KKVL+V+DD     QL+S
Sbjct: 114 KENRGLLRLQKKLLRDAQVLGVNEKLTTFDEGINMIKSRLCHKKVLVVLDDADHWSQLKS 173

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L G R+WFG GS+IIIT+R++HLL  H +DE+Y+P  LN +EAL LF+  AF+      +
Sbjct: 174 LVGKRDWFGEGSKIIITTRNKHLLIEHEMDELYEPPMLNTNEALDLFSEYAFRRNHRHDD 233

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
              LS RII Y  GLP AL+VLGS L  ++  +W+S L++L +EP  +I+++L+IS++GL
Sbjct: 234 YPSLSNRIIYYCQGLPFALKVLGSSLFSKTHGQWKSELDKLALEPNMDIINVLRISYEGL 293

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
              +K IFLDIACFFKG  +D+V   L+GCGF    GI VL ++CL+T+ +  LWMHDL+
Sbjct: 294 SNTQKNIFLDIACFFKGEYKDFVIKILDGCGFFAESGIGVLNDRCLVTILDRKLWMHDLI 353

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTEST 334
           Q+LG +IV+ Q    +G+RSRLW   +V H+L + T
Sbjct: 354 QQLGWEIVREQGYTNIGRRSRLWNFVDVQHMLIKKT 389


>gi|42566891|ref|NP_193420.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658418|gb|AEE83818.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1147

 Score =  289 bits (739), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 262/886 (29%), Positives = 423/886 (47%), Gaps = 124/886 (13%)

Query: 21   MIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS--KGGLVSLQRQLLSQLLK 78
            M+GI G  G+GK+TI R ++  +S +F    F+       S   G  +S +++LLS++L 
Sbjct: 209  MVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGSDVSGMKLSWEKELLSEILG 268

Query: 79   LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
              D  I    D   ++  RL+ KKVL+++DDV +++ L++L G  EWFGSGSRII+ ++D
Sbjct: 269  QKDIKI----DHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGSRIIVITQD 324

Query: 139  EHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALE 198
            + LLK H +D VY+    +   AL++ +  AF    P  +  +L+  +    G LPL L 
Sbjct: 325  KQLLKAHEIDLVYEVELPSQGLALKMISQYAFGKDSPPDDFKELAFEVAELVGSLPLGLS 384

Query: 199  VLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDR 258
            VLGS L GR  DEW   + RL  +   +I + L++ +D L +  +++F  IACFF G   
Sbjct: 385  VLGSSLKGRDKDEWVKMMPRLRNDSDDKIEETLRVGYDRLNKKNRELFKCIACFFNGFKV 444

Query: 259  DYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPEELGKR 317
              V   LE       +G+ +L +K LI +  +  + MH+LL++LG++I + +S     KR
Sbjct: 445  SNVKELLED-----DVGLTMLADKSLIRITPDGDIEMHNLLEKLGREIDRAKSKGNPAKR 499

Query: 318  SRLWKEEEVCHVLTESTGTELVEGI-VLDNYHHENEVYLCASAKAFSKMTNLRLLKI--- 373
              L   E++  V+TE TGTE V GI V           L  + ++F  M NL+ L+I   
Sbjct: 500  QFLTNFEDIQEVVTEKTGTETVLGIRVPPTVLFSTRPLLVINEESFKGMRNLQYLEIGHW 559

Query: 374  ------------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRI 421
                          + LP GL YL  +L+LL W   PLK LPS  + +  + + M YS++
Sbjct: 560  SEIGLWSEIGLWSKIDLPQGLVYLPLKLKLLKWNYCPLKSLPSTFKAEYLVNLIMKYSKL 619

Query: 422  GELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKL 481
             +LW+G   L  LK M L  S NL  +PD + A NLE+L L  C  L  +  S+    KL
Sbjct: 620  EKLWEGTLPLGSLKKMDLGCSNNLKEIPDLSLAINLEELNLSKCESLVTLPSSIQNAIKL 679

Query: 482  IIL---------------------------NMKDCTSLITLPGKILMKSLEKLNLKSLPT 514
              L                           +M+    LI LP K+     +   +K LP+
Sbjct: 680  RTLYCSGVLLIDLKSLEGMCNLEYLSVDWSSMEGTQGLIYLPRKLKRLWWDYCPVKRLPS 739

Query: 515  TISG----------------------LKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLE 552
                                      L  L  + + G    +E P++   + +L  L+L 
Sbjct: 740  NFKAEYLVELRMENSDLEKLWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAI-NLERLYLF 798

Query: 553  G-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI- 610
            G  ++  LP SI+  + L+ L++++C+ LE  P  + NL+ L  L L+GC  L+ FP I 
Sbjct: 799  GCESLVTLPSSIQNATKLINLDMRDCKKLESFPTDL-NLESLEYLNLTGCPNLRNFPAIK 857

Query: 611  -----VRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSL 664
                    ++D +E+ + D    K +P+ ++ L         DC  L+R        + L
Sbjct: 858  MGCSYFEILQDRNEIEVEDCFWNKNLPAGLDYL---------DC--LMRCMPCEFRPEYL 906

Query: 665  KTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSL 724
              L++SGC K E + E +  + SL+ +D+S +              NL       ++P L
Sbjct: 907  TFLDVSGC-KHEKLWEGIQSLGSLKRMDLSESE-------------NLT------EIPDL 946

Query: 725  SGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELE 784
            S   +L++L L  C  +   LPS IGNL  L  L + + + + L  +  +LS L+ ++L 
Sbjct: 947  SKATNLKRLYLNGCKSLV-TLPSTIGNLHRLVRLEMKECTGLELLPTDVNLSSLIILDLS 1005

Query: 785  DCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACL 830
             C  L++ P +   I  + +   A     ++ +  C  D T ++ L
Sbjct: 1006 GCSSLRTFPLISTRIECLYLENTA-----IEEVPCCIEDLTRLSVL 1046



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 181/416 (43%), Gaps = 89/416 (21%)

Query: 360  KAFSKMTNLRLLKI--CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
            K+   M NL  L +   +++   GL YL  +L+ L W   P+K LPSN + +  +E+ M 
Sbjct: 693  KSLEGMCNLEYLSVDWSSMEGTQGLIYLPRKLKRLWWDYCPVKRLPSNFKAEYLVELRME 752

Query: 418  YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
             S + +LW G + L  LK M L  S+ L  +PD + A NLE+L L GC  L  +  S+  
Sbjct: 753  NSDLEKLWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAINLERLYLFGCESLVTLPSSIQN 812

Query: 478  HNKLI-----------------------ILNMKDCTSLITLP----GKILMKSLEKLNL- 509
              KLI                        LN+  C +L   P    G    + L+  N  
Sbjct: 813  ATKLINLDMRDCKKLESFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSYFEILQDRNEI 872

Query: 510  --------KSLPTTISGLKCL-------------STLDVSG------------------- 529
                    K+LP  +  L CL             + LDVSG                   
Sbjct: 873  EVEDCFWNKNLPAGLDYLDCLMRCMPCEFRPEYLTFLDVSGCKHEKLWEGIQSLGSLKRM 932

Query: 530  DL----KFREFPEIVEHMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
            DL       E P++     +L  L+L G  ++  LP +I  L  LV L +K C  LE+LP
Sbjct: 933  DLSESENLTEIPDL-SKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLP 991

Query: 585  VTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLN 644
              V NL  L  L LSGCS L+ FP I   ++ L   +L+ T+I+EVP  IE LT+L +L 
Sbjct: 992  TDV-NLSSLIILDLSGCSSLRTFPLISTRIECL---YLENTAIEEVPCCIEDLTRLSVLL 1047

Query: 645  LSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH 700
            +  C+ L  +  +I  L SL   + + C          G I++L +  +  T   H
Sbjct: 1048 MYCCQRLKNISPNIFRLTSLMVADFTDC---------RGVIKALSDATVVATMEDH 1094


>gi|315507079|gb|ADU33175.1| putative TIR-NBS-LRR-AAA+ATPase [Cucumis sativus var. hardwickii]
          Length = 1037

 Score =  289 bits (739), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 227/688 (32%), Positives = 358/688 (52%), Gaps = 85/688 (12%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK-GGLVSLQRQLLS 74
           S+ + M G+ G+GG+GKTTIA+ +Y+ I+ EFE   FL N+RE S++ GGLV  Q++LL 
Sbjct: 207 SNGITMFGLYGVGGMGKTTIAKALYNKIADEFEGCCFLSNIREASNQYGGLVQFQKELLC 266

Query: 75  QLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIII 134
           ++L      + N+  GI ++ +RL  KK+LL++DDV   +QLQ+LAG  +WFG GS++I 
Sbjct: 267 EILMDDSIKVSNLPRGITIIRNRLYSKKILLILDDVDKREQLQALAGGHDWFGHGSKVIA 326

Query: 135 TSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLP 194
           T+R++ LL THG D++    GL+YDEAL+LF+   F+   PL   ++LS R + Y  GLP
Sbjct: 327 TTRNKQLLVTHGFDKMQNVGGLDYDEALELFSWHCFRNSHPLNVYLELSKRAVDYCKGLP 386

Query: 195 LALEVLGSFLSG--------RSVDEW-RSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           LALEVLGSFL+         R +DE+ +  L++       +I D L+IS+DGL++     
Sbjct: 387 LALEVLGSFLNSIGDPSNFKRILDEYEKHYLDK-------DIQDSLRISYDGLEDE---- 435

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQELGQQ 304
                                        GI  L+   L+T+   N + MH+++Q++G+ 
Sbjct: 436 -----------------------------GITKLMNLSLLTIGRFNRVEMHNIIQQMGRT 466

Query: 305 IVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSK 364
           I   ++ +   KR RL  +++   VL  +     V+ I L+         L   ++AF K
Sbjct: 467 IHLSETSKS-HKRKRLLIKDDAMDVLNGNKEARAVKVIKLN---FPKPTKLDIDSRAFDK 522

Query: 365 MTNLRLLKICNLQLPNG--LEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIG 422
           + NL +L++ N        LEYL + LR + W  +P   LP+   M+  IE+ + YS I 
Sbjct: 523 VKNLVVLEVGNATSSESSTLEYLPSSLRWMNWPQFPFSSLPTTYTMENLIELKLPYSSIK 582

Query: 423 ELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLI 482
              +G    ++LK + LS S  L+ +PD + A NL+ L L GC  L ++H S+   +KL+
Sbjct: 583 HFGQGYMSCERLKEINLSDSNLLVEIPDLSTAINLKYLNLVGCENLVKVHESIGSLSKLV 642

Query: 483 ILNMKDCT-SLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVE 541
            L+           P  + +KSL+ L++K+                  D    +F E ++
Sbjct: 643 ALHFSSSVKGFEQFPSCLKLKSLKFLSMKNCRI---------------DEWCPQFSEEMK 687

Query: 542 HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
            +E+LS  +   T    L  +I  L+ L  L+L  C+ L  LP T+  L  L SL +   
Sbjct: 688 SIEYLSIGY--STVTYQLSPTIGYLTSLKHLSLYYCKELTTLPSTIYRLTNLTSLTVLD- 744

Query: 602 SKLKKF-----PEIVRSMKDLSELFLDG---TSIKEVPSSIELLTKLELLNLSDCKNLVR 653
           S L  F     P +  S+  L++L L G   T++  + + + +   L+ L+LS+  N  R
Sbjct: 745 SNLSTFPFLNHPSLPSSLFYLTKLRLVGCKITNLDFLETIVYVAPSLKELDLSE-NNFCR 803

Query: 654 LPSSIIALKSLKTLNLSGCFKLENVPET 681
           LPS II  KSLK L    C  LE + + 
Sbjct: 804 LPSCIINFKSLKYLYTMDCELLEEISKV 831



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 130/553 (23%), Positives = 227/553 (41%), Gaps = 76/553 (13%)

Query: 481  LIILNMKDCTS-----LITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
            L++L + + TS     L  LP  +   +  +    SLPTT + ++ L  L +      + 
Sbjct: 526  LVVLEVGNATSSESSTLEYLPSSLRWMNWPQFPFSSLPTTYT-MENLIELKLPYS-SIKH 583

Query: 536  FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
            F +     E L E++L  + +      +     L  LNL  C +L  +  ++ +L  L +
Sbjct: 584  FGQGYMSCERLKEINLSDSNLLVEIPDLSTAINLKYLNLVGCENLVKVHESIGSLSKLVA 643

Query: 596  LKLSGCSK-LKKFPEIVRSMKDLSELFLDGTSIKE-VPSSIELLTKLELLNLSDCKNLVR 653
            L  S   K  ++FP  ++ +K L  L +    I E  P   E +  +E L++       +
Sbjct: 644  LHFSSSVKGFEQFPSCLK-LKSLKFLSMKNCRIDEWCPQFSEEMKSIEYLSIGYSTVTYQ 702

Query: 654  LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLM 713
            L  +I  L SLK L+L  C +L  +P T+ ++ +L  L +  + +       S  P    
Sbjct: 703  LSPTIGYLTSLKHLSLYYCKELTTLPSTIYRLTNLTSLTVLDSNL-------STFPF--- 752

Query: 714  RKSVALKLPSL-SGLCSLRKLNLTDCNLME-GALPSDIGNLCSLKELYLSKNSFVSLPTS 771
                 L  PSL S L  L KL L  C +     L + +    SLKEL LS+N+F  LP+ 
Sbjct: 753  -----LNHPSLPSSLFYLTKLRLVGCKITNLDFLETIVYVAPSLKELDLSENNFCRLPSC 807

Query: 772  ITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLD 831
            I +   L  +   DC+ L+ + ++P  +  +   G  SL    + L      +  ++C D
Sbjct: 808  IINFKSLKYLYTMDCELLEEISKVPKGVICMSAAGSISLARFPNNL------AEFMSCDD 861

Query: 832  SLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLY 891
            S++      L                    +V+    IP+W+ Y++   S+T   P++  
Sbjct: 862  SVEYCKGGELK------------------QLVLMNCHIPDWYRYKSMSDSLTFFLPADYL 903

Query: 892  NKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAG----S 947
            + K    +A C  F V  +            + +       +Y    +++ G  G     
Sbjct: 904  SWKWKALFAPCVKFEVTNDDWFQKLECKVFINDIQVWSSEEVYA-NQKERSGMFGKVSPG 962

Query: 948  DHLWLLYLSRQTCY-----DI------------RLPLESNLEPFESNHVNVSFE--PWLG 988
            +++WL+ L   T +     DI            +L  E N        + VSFE  PW  
Sbjct: 963  EYMWLIVLDPHTRFQSYSDDIMDRRSLKIIDLNQLSSEINSSQSILGKITVSFEVTPWY- 1021

Query: 989  QGLEVKMCGLHPV 1001
            + + +KMCG+H +
Sbjct: 1022 KDVVIKMCGVHVI 1034


>gi|255563210|ref|XP_002522608.1| conserved hypothetical protein [Ricinus communis]
 gi|223538084|gb|EEF39695.1| conserved hypothetical protein [Ricinus communis]
          Length = 840

 Score =  289 bits (739), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 168/430 (39%), Positives = 258/430 (60%), Gaps = 26/430 (6%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQ 75
           S DVR++GI GMGG+GKTT+AR +++ IS +F +  F+ NVRE   K  L  LQ +++S+
Sbjct: 206 SKDVRILGIWGMGGIGKTTLARKIFERISSKFHSLCFVANVREKLEKSTLDFLQHEIISK 265

Query: 76  LL--KLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRII 133
           LL  + +D+ + ++      +   + RKK+ +V+DDV D +Q+  L G R+ +  GSRII
Sbjct: 266 LLGKEYSDHGM-SIKISSSFIIKWIMRKKIFIVLDDVNDSEQINFLIGTRDIYSPGSRII 324

Query: 134 ITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGL 193
           ITSRD+ +LK +G  ++Y+   LNY  A QLF + AFK   P +  ++++   + Y  G+
Sbjct: 325 ITSRDKQILK-NGDADIYEVKKLNYHNAFQLFILHAFKGNPPAEALMEVARVAVEYGRGI 383

Query: 194 PLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFF 253
           PLAL+VLGS L  ++++EW+  L++LE     +I ++L+ISFD L + EK+IFLDIACFF
Sbjct: 384 PLALKVLGSNLYNKNIEEWKDHLKKLEGISDKKIRNVLKISFDDLDKDEKEIFLDIACFF 443

Query: 254 KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEE 313
           K  ++D V N L   G   +IGIR L++K LIT+ NN + MHDLLQ++G+ IV ++  + 
Sbjct: 444 KSEEKDKVENILSSFGHSAIIGIRSLLDKSLITISNNKICMHDLLQQMGRDIVLQEGVKN 503

Query: 314 LGKRSRLWKEEEVCHVLTESTGTEL-VEGIVLDNYHHENEVYLCASAKAFSKMTNLRLL- 371
             KRSRLW  +++ HVLT+  G  + +E I LD     +    C    AF +M  L+ L 
Sbjct: 504 PEKRSRLWIPQDIYHVLTKDLGKSISIESISLDMSKGRDMELNCT---AFERMNKLKFLK 560

Query: 372 -----------------KICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
                            KI N+ L     +L + LR L W  YPLK LP +   D  +++
Sbjct: 561 FYSPYYEQLQAEIDPPCKIFNISLSKNFSFLPDELRYLYWHKYPLKSLPLSFCPDNLVQL 620

Query: 415 YMCYSRIGEL 424
           ++  S + +L
Sbjct: 621 HLICSHVQQL 630


>gi|15242954|ref|NP_200620.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9759538|dbj|BAB11004.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332009616|gb|AED96999.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1046

 Score =  288 bits (738), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 230/698 (32%), Positives = 350/698 (50%), Gaps = 70/698 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMI-GICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +++  +K++ L+     D  MI GI G  G+GKTTIAR ++  +S  F+ + F++N+R  
Sbjct: 191 IEAHLQKMQSLLHLDYEDGAMIVGIYGPAGIGKTTIARALHSRLSSSFQLTCFMENIRGS 250

Query: 60  SSKG----GL-VSLQRQLLSQLLKLADNSIWNVFDGI--DMLGS---RLQRKKVLLVIDD 109
            + G    GL + LQ QLLS++L           DGI  + LG+   RL  +KVL+++DD
Sbjct: 251 YNSGLDEYGLKLRLQEQLLSKVLN---------HDGIRINHLGAIPERLCDQKVLIILDD 301

Query: 110 VVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKA 169
           V D++QL++LA    WFG GSRII+T+ D+ LL+ H V++ Y       +EA ++F   A
Sbjct: 302 VDDLQQLEALANETNWFGPGSRIIVTTEDQELLEQHDVNKKYHVDFPTREEACKIFCTYA 361

Query: 170 FKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILD 229
           F+         +L+ R+      LPL L V+GS L G+  D+W   L RLE     +I  
Sbjct: 362 FRRSFAPYGFEKLAERVTWLCSNLPLGLRVMGSTLRGKKEDDWEGILRRLENSLDRKIDG 421

Query: 230 ILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH- 288
           +L++ +D L E ++ ++L IA FF   D D+V   L        +G++ L  K LI +  
Sbjct: 422 VLRVGYDHLCEDDQFLYLLIAFFFNYVDDDHVKAMLVEDNLDVKLGLKTLAYKSLIQISA 481

Query: 289 NNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYH 348
              + MH LLQ +G++ +QRQ P    KR  L    E+C VL    GT  V GI  D   
Sbjct: 482 EGNIVMHKLLQRVGREAIQRQEPT---KRRILIDAREICDVLRYGKGTSNVSGISFDT-- 536

Query: 349 HENEVYLCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLK 400
             +   +  S  AF ++ +LR LK+          + +P G+E+    LRLL W  YP K
Sbjct: 537 -SDMSEVTISDDAFKRLHDLRFLKVTKSRYDGKYRMHIPAGIEFPC-LLRLLHWEAYPSK 594

Query: 401 FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
            LP     +  +E+ M  S++  LW G + L  LK M L  S NL  +PD T A NLE L
Sbjct: 595 CLPPTFNPEFLVELNMQGSQLEHLWSGTQSLRNLKNMDLGWSPNLKELPDLTNATNLEDL 654

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLK 520
            L  C  L EI  S    +KL  L M  C +L  +P  + + SLE++ +           
Sbjct: 655 NLNSCESLVEIPSSFSHLHKLKNLWMSYCINLQVIPAHMNLVSLERVTM----------- 703

Query: 521 CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNL---KNC 577
                  +G  +FR+ P I  H+ +L   H   T    +  SI L   L  LN+   +N 
Sbjct: 704 -------TGCSRFRKIPVISTHINYLDIAH--NTEFEVVHASIALWCRLHYLNMSYNENF 754

Query: 578 RSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELL 637
             L  LP++++ L  LR       S +++ P+ ++++  L    LD T  + + S  EL 
Sbjct: 755 MGLTHLPMSLTQL-ILRY------SDIERIPDCIKALHQL--FSLDLTGCRRLASLPELP 805

Query: 638 TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
             L  L   DC++L  + S +   ++L  LN + CFKL
Sbjct: 806 GSLLDLEAEDCESLETVFSPLHTPRAL--LNFTNCFKL 841



 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 169/357 (47%), Gaps = 39/357 (10%)

Query: 559 LPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLS 618
           +P  IE    L LL+ +   S + LP T  N + L  L + G S+L+      +S+++L 
Sbjct: 573 IPAGIEFPCLLRLLHWEAYPS-KCLPPTF-NPEFLVELNMQG-SQLEHLWSGTQSLRNLK 629

Query: 619 ELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLEN 677
            + L  + ++KE+P  +   T LE LNL+ C++LV +PSS   L  LK L +S C  L+ 
Sbjct: 630 NMDLGWSPNLKELPD-LTNATNLEDLNLNSCESLVEIPSSFSHLHKLKNLWMSYCINLQV 688

Query: 678 VPETLGQIESLEELDISGTA----VPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKL 733
           +P  +  + SLE + ++G +    +P  ++  +Y+ I        +   S++  C L  L
Sbjct: 689 IPAHMNLV-SLERVTMTGCSRFRKIPVISTHINYLDI-AHNTEFEVVHASIALWCRLHYL 746

Query: 734 NLT-DCNLME-GALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQS 791
           N++ + N M    LP       SL +L L  +    +P  I  L +L +++L  C+RL S
Sbjct: 747 NMSYNENFMGLTHLP------MSLTQLILRYSDIERIPDCIKALHQLFSLDLTGCRRLAS 800

Query: 792 LPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLE 851
           LP+LP ++  +    C SL T+   L   ++      C    KL G    A    R  + 
Sbjct: 801 LPELPGSLLDLEAEDCESLETVFSPLHTPRALLNFTNC---FKLGGQARRAIIRRRSEII 857

Query: 852 AVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVT----RPSNLYNKKKLVGYAICCV 904
                      ++PG E+P  F ++ +G+S+T+     RPS        + Y +C V
Sbjct: 858 G--------KALLPGREVPAEFDHRAKGNSLTIILNGYRPS-----YDFIQYLVCVV 901


>gi|19699367|gb|AAL91293.1| AT5g41750/MUF8_3 [Arabidopsis thaliana]
 gi|24111427|gb|AAN46864.1| At5g41750/MUF8_3 [Arabidopsis thaliana]
          Length = 828

 Score =  288 bits (737), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 213/637 (33%), Positives = 336/637 (52%), Gaps = 77/637 (12%)

Query: 60  SSKGGL-----VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
           S KGG      +SLQ+QLLS++LK  +  I +    +  +   L  +KVL+++DDV D++
Sbjct: 7   SIKGGAEHYSKLSLQKQLLSEILKQENMKIHH----LGTIKQWLHDQKVLIILDDVDDLE 62

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL+ LA +  WFGSGSRII+T+ D+++LK H + ++Y     + +EAL++  + AFK   
Sbjct: 63  QLEVLAEDPSWFGSGSRIIVTTEDKNILKAHRIQDIYHVDFPSEEEALEILCLSAFKQSS 122

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
                 +L+ ++    G LPL L V+G+ L  +S +EW   L R+E      I +IL+I 
Sbjct: 123 IPDGFEELANKVAELCGNLPLGLCVVGASLRRKSKNEWERLLSRIESSLDKNIDNILRIG 182

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCL--ITVHNNTL 292
           +D L   ++ +FL IACFF     DY+T  L       V G  +L ++ L  I+   + +
Sbjct: 183 YDRLSTEDQSLFLHIACFFNNEKVDYLTALLADRKLDVVNGFNILADRSLVRISTDGHVV 242

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
             H LLQ+LG++IV  Q P E GKR  L + EE+  VLT+ TGTE V+GI  D  + E  
Sbjct: 243 MHHYLLQKLGRRIVHEQWPNEPGKRQFLIEAEEIRDVLTKGTGTESVKGISFDTSNIEE- 301

Query: 353 VYLCASAKAFSKMTNLRLLKIC--------NLQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
             +     AF  M NL+ L+I          LQ+P  +EY+   +RLL W+ YP K LP 
Sbjct: 302 --VSVGKGAFEGMRNLQFLRIYRDSFNSEGTLQIPEDMEYIP-PVRLLHWQNYPRKSLPQ 358

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
               +  ++I M  S++ +LW GI+ L  LK + +S S +L  +P+ + A NLE L LE 
Sbjct: 359 RFNPEHLVKIRMPSSKLKKLWGGIQPLPNLKSIDMSFSYSLKEIPNLSKATNLEILSLEF 418

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLST 524
           C  L E+  S+L  +KL ILN+++C+ L  +P  I + SLE+                  
Sbjct: 419 CKSLVELPFSILNLHKLEILNVENCSMLKVIPTNINLASLER------------------ 460

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
           LD++G  + R FP+I  +++   +L+L  T I  +P S+   S L  L + +        
Sbjct: 461 LDMTGCSELRTFPDISSNIK---KLNLGDTMIEDVPPSVGCWSRLDHLYIGS-------- 509

Query: 585 VTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLN 644
                 + L+ L +  C               ++ L L  ++I+ +P SI  LT+L+ LN
Sbjct: 510 ------RSLKRLHVPPC---------------ITSLVLWKSNIESIPESIIGLTRLDWLN 548

Query: 645 LSDC---KNLVRLPSSIIALKSLKTLNLSG-CFKLEN 677
           ++ C   K+++ LPSS+  L +   ++L   CF   N
Sbjct: 549 VNSCRKLKSILGLPSSLQDLDANDCVSLKRVCFSFHN 585



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 140/303 (46%), Gaps = 58/303 (19%)

Query: 602 SKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           SKLKK    ++ + +L  + +  + S+KE+P+ +   T LE+L+L  CK+LV LP SI+ 
Sbjct: 373 SKLKKLWGGIQPLPNLKSIDMSFSYSLKEIPN-LSKATNLEILSLEFCKSLVELPFSILN 431

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK 720
           L  L+ LN+  C  L+ +P  +  + SLE LD++G                    S    
Sbjct: 432 LHKLEILNVENCSMLKVIPTNI-NLASLERLDMTGC-------------------SELRT 471

Query: 721 LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLS------------------- 761
            P +S   +++KLNL D   M   +P  +G    L  LY+                    
Sbjct: 472 FPDISS--NIKKLNLGDT--MIEDVPPSVGCWSRLDHLYIGSRSLKRLHVPPCITSLVLW 527

Query: 762 KNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCK 821
           K++  S+P SI  L++L  + +  C++L+S+  LP +++ +  N C SL       ++C 
Sbjct: 528 KSNIESIPESIIGLTRLDWLNVNSCRKLKSILGLPSSLQDLDANDCVSLK------RVCF 581

Query: 822 SDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSS 881
           S    I  L     L       ++  E  + +     +  + +PG +IPE F ++  G S
Sbjct: 582 SFHNPIRALSFNNCL-------NLDEEARKGIIQQSVYRYICLPGKKIPEEFTHKATGRS 634

Query: 882 ITV 884
           IT+
Sbjct: 635 ITI 637


>gi|315507087|gb|ADU33179.1| putative NBS-LRR protein [Cucumis sativus]
          Length = 855

 Score =  288 bits (737), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 229/690 (33%), Positives = 358/690 (51%), Gaps = 88/690 (12%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK-GGLVSLQRQLLS 74
           S+ + M G+ G+GG+GKTTIA+ +Y+ I+ EFE   FL N+RE S++ GGLV  Q++LL 
Sbjct: 25  SNGITMFGLYGVGGMGKTTIAKALYNKIADEFEGCCFLSNIREASNQYGGLVQFQKELLC 84

Query: 75  QLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIII 134
           ++L      + N+  GI ++ +RL  KK+LL++DDV   +QLQ+LAG  +WFG GS++I 
Sbjct: 85  EILMDDSIKVSNLPRGITIIRNRLYSKKILLILDDVDTREQLQALAGGHDWFGHGSKVIA 144

Query: 135 TSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLP 194
           T+R++ LL THG D++    GL+YDEAL+LF+   F+   PL   ++LS R + Y  GLP
Sbjct: 145 TTRNKQLLVTHGFDKMQNVGGLDYDEALELFSWHCFRNSHPLNVYLELSKRAVDYCKGLP 204

Query: 195 LALEVLGSFLSG--------RSVDEW-RSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           LALEVLGSFL          R +DE+ +  L++       +I D L+IS+DGL++     
Sbjct: 205 LALEVLGSFLHSIGDPSNFKRILDEYEKHYLDK-------DIQDSLRISYDGLEDE---- 253

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQELGQQ 304
                                        GI  L+   L+T+   N + MH+++Q++G+ 
Sbjct: 254 -----------------------------GITKLMNLSLLTIGRFNRVEMHNIIQQMGRT 284

Query: 305 IVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSK 364
           I   ++ +   KR RL  +++   VL  +     V+ I L+         L   ++AF K
Sbjct: 285 IHLSETSKS-HKRKRLLIKDDAMDVLNGNKEARAVKVIKLN---FPKPTKLDIDSRAFDK 340

Query: 365 MTNLRLLKICNLQLPNG--LEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIG 422
           + NL +L++ N        LEYL + LR + W  +P   LP+   M+  IE+ + YS I 
Sbjct: 341 VKNLVVLEVGNATSSESSTLEYLPSSLRWMNWPQFPFSSLPTTYTMENLIELKLPYSSIK 400

Query: 423 ELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLI 482
              +G    ++LK + LS S  L+ +PD + A NL+ L L GC  L ++H S+   +KL+
Sbjct: 401 HFGQGYMSCERLKEINLSDSNLLVEIPDLSTAINLKYLNLVGCENLVKVHESIGSLSKLV 460

Query: 483 ILNMKDCT-SLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVE 541
            L+           P  + +KSL+ L++K+                  D    +F E ++
Sbjct: 461 ALHFSSSVKGFEQFPSCLKLKSLKFLSMKNCRI---------------DEWCPQFSEEMK 505

Query: 542 HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
            +E+LS  +   T    L  +I  L+ L  L+L  C+ L  LP T+  L  L SL +   
Sbjct: 506 SIEYLSIGY--STVTYQLSPTIGYLTSLKHLSLYYCKELTTLPSTIYRLTNLTSLTVLD- 562

Query: 602 SKLKKF-----PEIVRSMKDLSELFLDG---TSIKEVPSSIELLTKLELLNLSDCKNLVR 653
           S L  F     P +  S+  L++L + G   T++  + + + +   L+ L+LS+  N  R
Sbjct: 563 SNLSTFPFLNHPSLPSSLFYLTKLRIVGCKITNLDFLETIVYVAPSLKELDLSE-NNFCR 621

Query: 654 LPSSIIALKSLKTLNLSGCFKLE---NVPE 680
           LPS II  KSLK L    C  LE    VPE
Sbjct: 622 LPSCIINFKSLKYLYTMDCELLEEISKVPE 651



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 129/553 (23%), Positives = 227/553 (41%), Gaps = 76/553 (13%)

Query: 481  LIILNMKDCTS-----LITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
            L++L + + TS     L  LP  +   +  +    SLPTT + ++ L  L +      + 
Sbjct: 344  LVVLEVGNATSSESSTLEYLPSSLRWMNWPQFPFSSLPTTYT-MENLIELKLPYS-SIKH 401

Query: 536  FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
            F +     E L E++L  + +      +     L  LNL  C +L  +  ++ +L  L +
Sbjct: 402  FGQGYMSCERLKEINLSDSNLLVEIPDLSTAINLKYLNLVGCENLVKVHESIGSLSKLVA 461

Query: 596  LKLSGCSK-LKKFPEIVRSMKDLSELFLDGTSIKE-VPSSIELLTKLELLNLSDCKNLVR 653
            L  S   K  ++FP  ++ +K L  L +    I E  P   E +  +E L++       +
Sbjct: 462  LHFSSSVKGFEQFPSCLK-LKSLKFLSMKNCRIDEWCPQFSEEMKSIEYLSIGYSTVTYQ 520

Query: 654  LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLM 713
            L  +I  L SLK L+L  C +L  +P T+ ++ +L  L +  + +       S  P    
Sbjct: 521  LSPTIGYLTSLKHLSLYYCKELTTLPSTIYRLTNLTSLTVLDSNL-------STFPF--- 570

Query: 714  RKSVALKLPSL-SGLCSLRKLNLTDCNLME-GALPSDIGNLCSLKELYLSKNSFVSLPTS 771
                 L  PSL S L  L KL +  C +     L + +    SLKEL LS+N+F  LP+ 
Sbjct: 571  -----LNHPSLPSSLFYLTKLRIVGCKITNLDFLETIVYVAPSLKELDLSENNFCRLPSC 625

Query: 772  ITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLD 831
            I +   L  +   DC+ L+ + ++P  +  +   G  SL    + L      +  ++C D
Sbjct: 626  IINFKSLKYLYTMDCELLEEISKVPEGVICMSAAGSISLARFPNNL------ADFMSCDD 679

Query: 832  SLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLY 891
            S++      L                    +V+    IP+W+ Y++   S+T   P++  
Sbjct: 680  SVEYCKGGELK------------------QLVLMNCHIPDWYRYKSMSDSLTFFLPADYL 721

Query: 892  NKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQAG----S 947
            + K    +A C  F V  +            + +       +Y    +++ G  G     
Sbjct: 722  SWKWKPLFAPCVKFEVTNDDWFQKLECKVFINDIQVWSSEEVYA-NQKERSGMFGKVSPG 780

Query: 948  DHLWLLYLSRQTCY-----DI------------RLPLESNLEPFESNHVNVSFE--PWLG 988
            +++WL+ L   T +     DI            +L  E N        + VSFE  PW  
Sbjct: 781  EYMWLIVLDPHTRFQSYSDDIMDRRSLKIIDLNQLSSEINSSQSILGKITVSFEVTPWY- 839

Query: 989  QGLEVKMCGLHPV 1001
            + + +KMCG+H +
Sbjct: 840  KDVVIKMCGVHVI 852


>gi|297788454|ref|XP_002862328.1| hypothetical protein ARALYDRAFT_497514 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297307728|gb|EFH38586.1| hypothetical protein ARALYDRAFT_497514 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 721

 Score =  288 bits (737), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 219/665 (32%), Positives = 345/665 (51%), Gaps = 84/665 (12%)

Query: 97  RLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGL 156
           RL  K+VL+V+D +    QL ++A    WFG GSRIIIT++D+ LLK HG++ +YK    
Sbjct: 8   RLNDKRVLIVLDSIDQSIQLDAIAKETRWFGHGSRIIITTQDQRLLKAHGINHIYKVEFP 67

Query: 157 NYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTL 216
           +  EA Q+F M AF    P     +L+ ++ +  G LPL L V+GS   G S  EW + L
Sbjct: 68  SAYEAYQMFCMYAFDQNFPKDGFEELAWQVTKLLGNLPLGLRVMGSHFRGMSRHEWVNAL 127

Query: 217 ERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGI 276
            RL+I   + I  IL+ S+D L + +K +FL IAC F  N+   V ++L         G+
Sbjct: 128 PRLKIRLDASIQSILKFSYDALCDEDKDLFLHIACLF--NNDGMVKDYLALSFLDVRQGL 185

Query: 277 RVLIEKCLITVH-----NNTLWMHDLLQELGQQIVQR----QSPEELGKRSRLWKEEEVC 327
            +L EK LI +         + MH+LL +LG+ IV+     QS    GKR  L    ++C
Sbjct: 186 HLLAEKSLIALEIFSADYTHIKMHNLLVQLGRDIVRHKPGHQSICAPGKRQFLVDARDIC 245

Query: 328 HVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKIC--------NLQLP 379
            VLT++TG+  V GI+ + Y    E+ +  S +AF  M+NL+ L+           L LP
Sbjct: 246 EVLTDNTGSRNVIGILFEVYTLSGELNI--SERAFEGMSNLKFLRFHGPYDGQSDKLYLP 303

Query: 380 NGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMIL 439
            GL  L  +LRL+ W  +P+K LPSN      + I M  S++  LW+G + L  LK M L
Sbjct: 304 QGLNNLPRKLRLIEWSRFPMKCLPSNFCTKYLVHIDMWNSKLENLWQGNQPLGNLKRMDL 363

Query: 440 SHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKI 499
             S++L  +P+ + A NLE L L GC+ L E+  SL    KL  L ++ C++L       
Sbjct: 364 RESKHLKELPNLSTATNLENLTLFGCSSLAELPSSLGNLQKLQELRLQGCSTLD------ 417

Query: 500 LMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGL 559
            ++   KL  ++LPT I+ L+ L+ LD++  L  + FPEI  +++   +L L  TAI+ +
Sbjct: 418 -LQGCSKL--EALPTNIN-LESLNNLDLTACLLIKSFPEISTNIK---DLMLMKTAIKEV 470

Query: 560 PLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSE 619
           P +I+  S L                        R+L++S    LK+FP    ++  +++
Sbjct: 471 PSTIKSWSHL------------------------RNLEMSYNDNLKEFPH---ALDIITK 503

Query: 620 LFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP------SSIIAL--KSLKTLNLS- 670
           L+ + T I+E+P  ++ +++L+ L L  CK LV +P      S++IA+  +SL+ L+ S 
Sbjct: 504 LYFNDTEIQEIPLWVKKISRLQTLVLKGCKRLVTIPQLSDSLSNVIAINCQSLERLDFSF 563

Query: 671 -----------GCFKLENVPETLGQIESLEELDISGTAVPHSTSWY---SYIPINLMRKS 716
                       CFKL N      Q  S     +    VP + ++    S+I +NL ++ 
Sbjct: 564 HNHPERYLRFINCFKLNNEAREFIQTSSSTSAFLPAREVPANFTYRANGSFIMVNLNQRP 623

Query: 717 VALKL 721
           ++  L
Sbjct: 624 LSTTL 628



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 129/274 (47%), Gaps = 31/274 (11%)

Query: 623 DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLK--------TLNLSGCFK 674
           +   +KE+P+ +   T LE L L  C +L  LPSS+  L+ L+        TL+L GC K
Sbjct: 365 ESKHLKELPN-LSTATNLENLTLFGCSSLAELPSSLGNLQKLQELRLQGCSTLDLQGCSK 423

Query: 675 LENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK-LPS-LSGLCSLRK 732
           LE +P  +  +ESL  LD++   +  S    S    +LM    A+K +PS +     LR 
Sbjct: 424 LEALPTNIN-LESLNNLDLTACLLIKSFPEISTNIKDLMLMKTAIKEVPSTIKSWSHLRN 482

Query: 733 LNLT-DCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQS 791
           L ++ + NL E     DI     + +LY +      +P  +  +S+L  + L+ CKRL +
Sbjct: 483 LEMSYNDNLKEFPHALDI-----ITKLYFNDTEIQEIPLWVKKISRLQTLVLKGCKRLVT 537

Query: 792 LPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLE 851
           +PQL  ++  V    C SL  L             +  ++  K L N++      RE+++
Sbjct: 538 IPQLSDSLSNVIAINCQSLERL--DFSFHNHPERYLRFINCFK-LNNEA------REFIQ 588

Query: 852 AVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVT 885
             S+T    S  +P  E+P  F Y+  GS I V 
Sbjct: 589 TSSST----SAFLPAREVPANFTYRANGSFIMVN 618


>gi|227438253|gb|ACP30616.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1791

 Score =  288 bits (736), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 222/709 (31%), Positives = 353/709 (49%), Gaps = 63/709 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +++  +K++ L+ S      ++GICG  G+GKTTIAR ++  +S  F+ + F++N+R   
Sbjct: 190 IEAHLDKMQSLLHSDEDGAMIVGICGPAGIGKTTIARALHSRLSSGFQLTCFMENLRGSC 249

Query: 61  SKGGL------VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
           + GGL      + LQ  LLS++       I++    +  +  RL   KVL+++DDV D++
Sbjct: 250 NSGGLDEYGLKLRLQELLLSKIFNQNGMRIYH----LGAIPERLCDLKVLIILDDVDDLQ 305

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL++LA    WFG GSRII+T+ D+ LL+ HG+  +Y        EA ++F   AF+   
Sbjct: 306 QLEALADETNWFGDGSRIIVTTEDQELLEQHGITNIYHVDLPTEKEARKIFCRYAFRQSL 365

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           P      L+ R     G LP  L V+GS L G+  D+W S L RLE     +I  +L++ 
Sbjct: 366 PPYGYENLAERATELCGNLPFGLRVMGSMLRGKKEDDWESILCRLENSNIPKIEAVLRVG 425

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLW 293
           +D L E ++ +F  IA FF   +  +V   L   G    +G++ L  K LI + +   + 
Sbjct: 426 YDSLHEKDQILFHLIAVFFNYENDGHVKTMLADSGLDVRLGLKTLAYKSLIKISSEGEVV 485

Query: 294 MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
           MH LLQ++G+Q +QRQ P    KR  L   +++  VL   +G+  + GI  D    ++++
Sbjct: 486 MHKLLQQVGRQAIQRQEP---WKRQILIDTDDIRDVLENDSGSRSLMGISFDMSTIKDDM 542

Query: 354 YLCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSN 405
            +  SA+ F  M  LR L++ N        + LP  +E+   RL+LL W  YP K LP  
Sbjct: 543 DI--SARVFKSMRTLRFLRVYNTRCDTNVRVHLPEDMEF-PPRLKLLHWEVYPRKCLPRT 599

Query: 406 LQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
              +  +E+++  +++ +LW+G + L  LK M+L     L  +PD   A NLE L + GC
Sbjct: 600 FCPEHLVELHLTDTQLEQLWEGTQPLTSLKKMVLVSCLCLKELPDLANATNLEILDVCGC 659

Query: 466 TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLP---TTI 516
             L EIH S+   ++L  L+M  C  L  +P    + SLE L       ++ LP   TTI
Sbjct: 660 QSLVEIHSSVGNLHRLQSLDMIFCKKLQVVPTLFNLTSLESLVIMGSYQMRELPDISTTI 719

Query: 517 SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
             L    T+         EF E      HL  L + G AI    ++    S   L+ +++
Sbjct: 720 RELSIPETM-------LEEFLESTRLWSHLQCLEIFGCAITHQFMAHP--SQRNLMVMRS 770

Query: 577 CRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIEL 636
              +E +P  +  L  L+ L + GC KL   PE+ RS+  L        ++ + P S+E 
Sbjct: 771 VTGIERIPDCIKCLHGLKELSIYGCPKLASLPELPRSLTTL--------TVYKCP-SLET 821

Query: 637 L------TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVP 679
           L       ++E L+  DC  L R    +I  +S +      C    NVP
Sbjct: 822 LEPFPFGARIEDLSFLDCFRLGRKARRLITQQSSRV-----CLPGRNVP 865



 Score =  239 bits (610), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 188/562 (33%), Positives = 280/562 (49%), Gaps = 63/562 (11%)

Query: 1    MDSRCEKLRFLM---DSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVR 57
            +++  EK++ L+   D G +    +GICG  G+GKTTIAR ++  +S  F+ S F++N+R
Sbjct: 1053 IEAHLEKMQSLLHLDDEGGA--MFVGICGPAGIGKTTIARALHSRLSSGFQHSCFMENLR 1110

Query: 58   EISSKGGL------VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVV 111
                  GL      + LQ  LLS++       I++    +  +  RL  +KVL+++DDV 
Sbjct: 1111 GSCCNSGLDEYGLKLRLQELLLSKIFNQNGMRIYH----LGAIPERLCDQKVLIILDDVD 1166

Query: 112  DVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFK 171
            D+KQL++LA   +WFG GSR+I+                     L  D A Q+F   AF+
Sbjct: 1167 DLKQLEALADETKWFGDGSRVILM--------------------LELD-ARQIFCRIAFR 1205

Query: 172  TYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDIL 231
                     +L  R++     LPL L V+GS L  + VD+W + L+RLE     +I  +L
Sbjct: 1206 QLSAPHGFEKLVERVVNLCSNLPLGLRVMGSSLRRKKVDDWEAILQRLENSLNRDIEGVL 1265

Query: 232  QISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NN 290
            ++ +D L + ++ +F  IACFF   D D V   L        +G++ L  K LI +    
Sbjct: 1266 RVGYDNLHKDDQFLFQLIACFFNYQDDDRVKAMLVDSNLDVRLGLKTLSYKSLIQISAEG 1325

Query: 291  TLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHE 350
            T+ MH LLQ++G++ V  Q P    KR  L    ++C VL     +  V GI  D     
Sbjct: 1326 TIVMHKLLQQVGREAVHLQEPR---KRQILIDAHQICDVLENDYDSASVMGISFDTSTIP 1382

Query: 351  NEVYLCASAKAFSKMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFL 402
            N V  C SA+AF  M +LR L I          + LP  + +    LRLL W  YP K L
Sbjct: 1383 NGV--CISAQAFRTMRDLRFLSIYETRRDPNVRMHLPEDMSF-PPLLRLLHWEVYPGKCL 1439

Query: 403  PSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
            P  L+ +  +E+    S++ +LW+GI+ L  LK M LS S +L  +PD + A +L++L L
Sbjct: 1440 PHTLRPEHLVELCFVNSKLEQLWQGIQPLTNLKKMDLSGSLSLKEVPDLSNATHLKRLNL 1499

Query: 463  EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLPTTI 516
             GC  L EI  S+   +KL  L +  C SL   P  + + SLE L       L+ +P   
Sbjct: 1500 TGCWSLVEIPSSIGDLHKLEELEINLCISLQVFPSHLNLASLETLEMVGCWQLRKIPYVS 1559

Query: 517  SGLKCLSTLDVSGDLKFREFPE 538
            +  K L    V GD    EFPE
Sbjct: 1560 T--KSL----VIGDTMLEEFPE 1575



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 8/132 (6%)

Query: 509  LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT-AIRGLPLSIELLS 567
            L+ L   I  L  L  +D+SG L  +E P++  +  HL  L+L G  ++  +P SI  L 
Sbjct: 1458 LEQLWQGIQPLTNLKKMDLSGSLSLKEVPDL-SNATHLKRLNLTGCWSLVEIPSSIGDLH 1516

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSI 627
             L  L +  C SL++ P  + NL  L +L++ GC +L+K P +         L +  T +
Sbjct: 1517 KLEELEINLCISLQVFPSHL-NLASLETLEMVGCWQLRKIPYV-----STKSLVIGDTML 1570

Query: 628  KEVPSSIELLTK 639
            +E P S+ L  K
Sbjct: 1571 EEFPESLCLEAK 1582



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 132/312 (42%), Gaps = 49/312 (15%)

Query: 617 LSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
           L EL L  T ++++    + LT L+ + L  C  L  LP  +    +L+ L++ GC  L 
Sbjct: 605 LVELHLTDTQLEQLWEGTQPLTSLKKMVLVSCLCLKELPD-LANATNLEILDVCGCQSLV 663

Query: 677 NVPETLGQIESLEELDI----SGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRK 732
            +  ++G +  L+ LD+        VP   +  S   + +M      +LP +S   ++R+
Sbjct: 664 EIHSSVGNLHRLQSLDMIFCKKLQVVPTLFNLTSLESLVIMGSYQMRELPDIS--TTIRE 721

Query: 733 LNLTDCNLME----GALPSDIGNL----CSLKELYLSKNSFVSL------------PTSI 772
           L++ +  L E      L S +  L    C++   +++  S  +L            P  I
Sbjct: 722 LSIPETMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMRSVTGIERIPDCI 781

Query: 773 THLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDS 832
             L  L  + +  C +L SLP+LP ++  + V  C SL TL              A ++ 
Sbjct: 782 KCLHGLKELSIYGCPKLASLPELPRSLTTLTVYKCPSLETL--------EPFPFGARIED 833

Query: 833 LKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYN 892
           L  L      F + R+    +  T+Q   V +PG  +P  F ++  G+ + +   SN Y 
Sbjct: 834 LSFLD----CFRLGRKARRLI--TQQSSRVCLPGRNVPAEFHHRAIGNFVAIC--SNAYR 885

Query: 893 KKKLVGYAICCV 904
                 + IC V
Sbjct: 886 ------FKICAV 891



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 25/136 (18%)

Query: 544  EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            EHL EL    + +  L   I+ L+ L  ++L    SL+ +P  +SN   L+ L L+GC  
Sbjct: 1446 EHLVELCFVNSKLEQLWQGIQPLTNLKKMDLSGSLSLKEVP-DLSNATHLKRLNLTGCWS 1504

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
            L                        E+PSSI  L KLE L ++ C +L   PS  + L S
Sbjct: 1505 L-----------------------VEIPSSIGDLHKLEELEINLCISLQVFPSH-LNLAS 1540

Query: 664  LKTLNLSGCFKLENVP 679
            L+TL + GC++L  +P
Sbjct: 1541 LETLEMVGCWQLRKIP 1556



 Score = 48.5 bits (114), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 602  SKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
            SKL++  + ++ + +L ++ L G+ S+KEVP  +   T L+ LNL+ C +LV +PSSI  
Sbjct: 1456 SKLEQLWQGIQPLTNLKKMDLSGSLSLKEVPD-LSNATHLKRLNLTGCWSLVEIPSSIGD 1514

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
            L  L+ L ++ C  L+  P  L  + SLE L++ G
Sbjct: 1515 LHKLEELEINLCISLQVFPSHLN-LASLETLEMVG 1548



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 25/140 (17%)

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
           S+  L  L  L++  C+ L+++P T+ NL  L SL + G  ++++ P+I  ++++LS   
Sbjct: 668 SVGNLHRLQSLDMIFCKKLQVVP-TLFNLTSLESLVIMGSYQMRELPDISTTIRELS--- 723

Query: 622 LDGTSIKEVPSSIELLTKLELLNLSDC------------KNLV---------RLPSSIIA 660
           +  T ++E   S  L + L+ L +  C            +NL+         R+P  I  
Sbjct: 724 IPETMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMRSVTGIERIPDCIKC 783

Query: 661 LKSLKTLNLSGCFKLENVPE 680
           L  LK L++ GC KL ++PE
Sbjct: 784 LHGLKELSIYGCPKLASLPE 803



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 66/225 (29%)

Query: 672  CF---KLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK-LPSLSGL 727
            CF   KLE + + +  + +L+++D+SG                    S++LK +P LS  
Sbjct: 1452 CFVNSKLEQLWQGIQPLTNLKKMDLSG--------------------SLSLKEVPDLSNA 1491

Query: 728  CSLRKLNLTDC-NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITH--LSKLLNIELE 784
              L++LNLT C +L+E  +PS IG+L  L+EL +  N  +SL    +H  L+ L  +E+ 
Sbjct: 1492 THLKRLNLTGCWSLVE--IPSSIGDLHKLEELEI--NLCISLQVFPSHLNLASLETLEMV 1547

Query: 785  DCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFS 844
             C +L+ +P +     +  V G   L    ++L           CL++ +++        
Sbjct: 1548 GCWQLRKIPYVST---KSLVIGDTMLEEFPESL-----------CLEAKRVI-------- 1585

Query: 845  MLREYLEAVSNTRQHLSVVVPGSEIPEWF-MYQNEGSSITVTRPS 888
                       T+Q      PG E+P  F  +++ GSS+T+ RP+
Sbjct: 1586 -----------TQQSFRAYFPGKEMPAEFDDHRSFGSSLTI-RPA 1618


>gi|227438147|gb|ACP30563.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1799

 Score =  288 bits (736), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 222/709 (31%), Positives = 353/709 (49%), Gaps = 63/709 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +++  +K++ L+ S      ++GICG  G+GKTTIAR ++  +S  F+ + F++N+R   
Sbjct: 190 IEAHLDKMQSLLHSDEDGAMIVGICGPAGIGKTTIARALHSRLSSGFQLTCFMENLRGSC 249

Query: 61  SKGGL------VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
           + GGL      + LQ  LLS++       I++    +  +  RL   KVL+++DDV D++
Sbjct: 250 NSGGLDEYGLKLRLQELLLSKIFNQNGMRIYH----LGAIPERLCDLKVLIILDDVDDLQ 305

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL++LA    WFG GSRII+T+ D+ LL+ HG+  +Y        EA ++F   AF+   
Sbjct: 306 QLEALADETNWFGDGSRIIVTTEDQELLEQHGITNIYHVDLPTEKEARKIFCRYAFRQSL 365

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           P      L+ R     G LP  L V+GS L G+  D+W S L RLE     +I  +L++ 
Sbjct: 366 PPYGYENLAERATELCGNLPFGLRVMGSMLRGKKEDDWESILCRLENSNIPKIEAVLRVG 425

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLW 293
           +D L E ++ +F  IA FF   +  +V   L   G    +G++ L  K LI + +   + 
Sbjct: 426 YDSLHEKDQILFHLIAVFFNYENDGHVKTMLADSGLDVRLGLKTLAYKSLIKISSEGEVV 485

Query: 294 MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
           MH LLQ++G+Q +QRQ P    KR  L   +++  VL   +G+  + GI  D    ++++
Sbjct: 486 MHKLLQQVGRQAIQRQEP---WKRQILIDTDDIRDVLENDSGSRSLMGISFDMSTIKDDM 542

Query: 354 YLCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSN 405
            +  SA+ F  M  LR L++ N        + LP  +E+   RL+LL W  YP K LP  
Sbjct: 543 DI--SARVFKSMRTLRFLRVYNTRCDTNVRVHLPEDMEF-PPRLKLLHWEVYPRKCLPRT 599

Query: 406 LQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGC 465
              +  +E+++  +++ +LW+G + L  LK M+L     L  +PD   A NLE L + GC
Sbjct: 600 FCPEHLVELHLTDTQLEQLWEGTQPLTSLKKMVLVSCLCLKELPDLANATNLEILDVCGC 659

Query: 466 TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLP---TTI 516
             L EIH S+   ++L  L+M  C  L  +P    + SLE L       ++ LP   TTI
Sbjct: 660 QSLVEIHSSVGNLHRLQSLDMIFCKKLQVVPTLFNLTSLESLVIMGSYQMRELPDISTTI 719

Query: 517 SGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
             L    T+         EF E      HL  L + G AI    ++    S   L+ +++
Sbjct: 720 RELSIPETM-------LEEFLESTRLWSHLQCLEIFGCAITHQFMAHP--SQRNLMVMRS 770

Query: 577 CRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIEL 636
              +E +P  +  L  L+ L + GC KL   PE+ RS+  L        ++ + P S+E 
Sbjct: 771 VTGIERIPDCIKCLHGLKELSIYGCPKLASLPELPRSLTTL--------TVYKCP-SLET 821

Query: 637 L------TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVP 679
           L       ++E L+  DC  L R    +I  +S +      C    NVP
Sbjct: 822 LEPFPFGARIEDLSFLDCFRLGRKARRLITQQSSRV-----CLPGRNVP 865



 Score =  239 bits (610), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 188/562 (33%), Positives = 280/562 (49%), Gaps = 63/562 (11%)

Query: 1    MDSRCEKLRFLM---DSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVR 57
            +++  EK++ L+   D G +    +GICG  G+GKTTIAR ++  +S  F+ S F++N+R
Sbjct: 1109 IEAHLEKMQSLLHLDDEGGA--MFVGICGPAGIGKTTIARALHSRLSSGFQHSCFMENLR 1166

Query: 58   EISSKGGL------VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVV 111
                  GL      + LQ  LLS++       I++    +  +  RL  +KVL+++DDV 
Sbjct: 1167 GSCCNSGLDEYGLKLRLQELLLSKIFNQNGMRIYH----LGAIPERLCDQKVLIILDDVD 1222

Query: 112  DVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFK 171
            D+KQL++LA   +WFG GSR+I+                     L  D A Q+F   AF+
Sbjct: 1223 DLKQLEALADETKWFGDGSRVILM--------------------LELD-ARQIFCRIAFR 1261

Query: 172  TYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDIL 231
                     +L  R++     LPL L V+GS L  + VD+W + L+RLE     +I  +L
Sbjct: 1262 QLSAPHGFEKLVERVVNLCSNLPLGLRVMGSSLRRKKVDDWEAILQRLENSLNRDIEGVL 1321

Query: 232  QISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NN 290
            ++ +D L + ++ +F  IACFF   D D V   L        +G++ L  K LI +    
Sbjct: 1322 RVGYDNLHKDDQFLFQLIACFFNYQDDDRVKAMLVDSNLDVRLGLKTLSYKSLIQISAEG 1381

Query: 291  TLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHE 350
            T+ MH LLQ++G++ V  Q P    KR  L    ++C VL     +  V GI  D     
Sbjct: 1382 TIVMHKLLQQVGREAVHLQEPR---KRQILIDAHQICDVLENDYDSASVMGISFDTSTIP 1438

Query: 351  NEVYLCASAKAFSKMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFL 402
            N V  C SA+AF  M +LR L I          + LP  + +    LRLL W  YP K L
Sbjct: 1439 NGV--CISAQAFRTMRDLRFLSIYETRRDPNVRMHLPEDMSF-PPLLRLLHWEVYPGKCL 1495

Query: 403  PSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
            P  L+ +  +E+    S++ +LW+GI+ L  LK M LS S +L  +PD + A +L++L L
Sbjct: 1496 PHTLRPEHLVELCFVNSKLEQLWQGIQPLTNLKKMDLSGSLSLKEVPDLSNATHLKRLNL 1555

Query: 463  EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLPTTI 516
             GC  L EI  S+   +KL  L +  C SL   P  + + SLE L       L+ +P   
Sbjct: 1556 TGCWSLVEIPSSIGDLHKLEELEINLCISLQVFPSHLNLASLETLEMVGCWQLRKIPYVS 1615

Query: 517  SGLKCLSTLDVSGDLKFREFPE 538
            +  K L    V GD    EFPE
Sbjct: 1616 T--KSL----VIGDTMLEEFPE 1631



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 8/132 (6%)

Query: 509  LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT-AIRGLPLSIELLS 567
            L+ L   I  L  L  +D+SG L  +E P++  +  HL  L+L G  ++  +P SI  L 
Sbjct: 1514 LEQLWQGIQPLTNLKKMDLSGSLSLKEVPDL-SNATHLKRLNLTGCWSLVEIPSSIGDLH 1572

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSI 627
             L  L +  C SL++ P  + NL  L +L++ GC +L+K P +         L +  T +
Sbjct: 1573 KLEELEINLCISLQVFPSHL-NLASLETLEMVGCWQLRKIPYV-----STKSLVIGDTML 1626

Query: 628  KEVPSSIELLTK 639
            +E P S+ L  K
Sbjct: 1627 EEFPESLCLEAK 1638



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 132/312 (42%), Gaps = 49/312 (15%)

Query: 617 LSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
           L EL L  T ++++    + LT L+ + L  C  L  LP  +    +L+ L++ GC  L 
Sbjct: 605 LVELHLTDTQLEQLWEGTQPLTSLKKMVLVSCLCLKELPD-LANATNLEILDVCGCQSLV 663

Query: 677 NVPETLGQIESLEELDI----SGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRK 732
            +  ++G +  L+ LD+        VP   +  S   + +M      +LP +S   ++R+
Sbjct: 664 EIHSSVGNLHRLQSLDMIFCKKLQVVPTLFNLTSLESLVIMGSYQMRELPDIS--TTIRE 721

Query: 733 LNLTDCNLME----GALPSDIGNL----CSLKELYLSKNSFVSL------------PTSI 772
           L++ +  L E      L S +  L    C++   +++  S  +L            P  I
Sbjct: 722 LSIPETMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMRSVTGIERIPDCI 781

Query: 773 THLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDS 832
             L  L  + +  C +L SLP+LP ++  + V  C SL TL              A ++ 
Sbjct: 782 KCLHGLKELSIYGCPKLASLPELPRSLTTLTVYKCPSLETL--------EPFPFGARIED 833

Query: 833 LKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYN 892
           L  L      F + R+    +  T+Q   V +PG  +P  F ++  G+ + +   SN Y 
Sbjct: 834 LSFLD----CFRLGRKARRLI--TQQSSRVCLPGRNVPAEFHHRAIGNFVAIC--SNAYR 885

Query: 893 KKKLVGYAICCV 904
                 + IC V
Sbjct: 886 ------FKICAV 891



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 25/136 (18%)

Query: 544  EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            EHL EL    + +  L   I+ L+ L  ++L    SL+ +P  +SN   L+ L L+GC  
Sbjct: 1502 EHLVELCFVNSKLEQLWQGIQPLTNLKKMDLSGSLSLKEVP-DLSNATHLKRLNLTGCWS 1560

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
            L                        E+PSSI  L KLE L ++ C +L   PS  + L S
Sbjct: 1561 L-----------------------VEIPSSIGDLHKLEELEINLCISLQVFPSH-LNLAS 1596

Query: 664  LKTLNLSGCFKLENVP 679
            L+TL + GC++L  +P
Sbjct: 1597 LETLEMVGCWQLRKIP 1612



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 25/140 (17%)

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
           S+  L  L  L++  C+ L+++P T+ NL  L SL + G  ++++ P+I  ++++LS   
Sbjct: 668 SVGNLHRLQSLDMIFCKKLQVVP-TLFNLTSLESLVIMGSYQMRELPDISTTIRELS--- 723

Query: 622 LDGTSIKEVPSSIELLTKLELLNLSDC------------KNLV---------RLPSSIIA 660
           +  T ++E   S  L + L+ L +  C            +NL+         R+P  I  
Sbjct: 724 IPETMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMRSVTGIERIPDCIKC 783

Query: 661 LKSLKTLNLSGCFKLENVPE 680
           L  LK L++ GC KL ++PE
Sbjct: 784 LHGLKELSIYGCPKLASLPE 803



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 602  SKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
            SKL++  + ++ + +L ++ L G+ S+KEVP  +   T L+ LNL+ C +LV +PSSI  
Sbjct: 1512 SKLEQLWQGIQPLTNLKKMDLSGSLSLKEVPD-LSNATHLKRLNLTGCWSLVEIPSSIGD 1570

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
            L  L+ L ++ C  L+  P  L  + SLE L++ G
Sbjct: 1571 LHKLEELEINLCISLQVFPSHLN-LASLETLEMVG 1604



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 48/195 (24%)

Query: 704  WYSYIPINLMRK-----SVALK-LPSLSGLCSLRKLNLTDC-NLMEGALPSDIGNLCSLK 756
            W    P+  ++K     S++LK +P LS    L++LNLT C +L+E  +PS IG+L  L+
Sbjct: 1518 WQGIQPLTNLKKMDLSGSLSLKEVPDLSNATHLKRLNLTGCWSLVE--IPSSIGDLHKLE 1575

Query: 757  ELYLSKNSFVSLPTSITH--LSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLL 814
            EL +  N  +SL    +H  L+ L  +E+  C +L+ +P +     +  V G   L    
Sbjct: 1576 ELEI--NLCISLQVFPSHLNLASLETLEMVGCWQLRKIPYVST---KSLVIGDTMLEEFP 1630

Query: 815  DALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWF- 873
            ++L           CL++ +++                   T+Q      PG E+P  F 
Sbjct: 1631 ESL-----------CLEAKRVI-------------------TQQSFRAYFPGKEMPAEFD 1660

Query: 874  MYQNEGSSITVTRPS 888
             +++ GSS+T+ RP+
Sbjct: 1661 DHRSFGSSLTI-RPA 1674


>gi|45544515|dbj|BAD12595.1| truncated N protein [Nicotiana tabacum]
          Length = 638

 Score =  287 bits (735), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 166/437 (37%), Positives = 265/437 (60%), Gaps = 19/437 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLI------SHEFEASGFLD 54
           +D+  EK+  L++ G + VR++GI GMGG+GKTTIAR ++D +      S++F+ + FL 
Sbjct: 183 IDTHLEKIESLLEIGINGVRIMGIWGMGGVGKTTIARAIFDTLLGRMDSSYQFDGACFLK 242

Query: 55  NVREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
           +++E  +K G+ SLQ  LLS+LL+   N   N  DG   + SRL+ KKVL+V+DD+ +  
Sbjct: 243 DIKE--NKRGMHSLQNALLSELLREKANYN-NEEDGKHQMASRLRSKKVLIVLDDIDNKD 299

Query: 115 Q-LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY 173
             L+ LAG+ +WFG+GSRIIIT+RD+HL++ + +  +Y+   L   E++QLF   AF   
Sbjct: 300 HYLEYLAGDLDWFGNGSRIIITTRDKHLIEKNDI--IYEVTALPDHESIQLFKQHAFGKE 357

Query: 174 QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
            P +   +LS  ++ YA GLPLAL+V GS L    + EW+S +E ++    S I+D L+I
Sbjct: 358 VPNENFEKLSLEVVNYAKGLPLALKVWGSLLHNLRLTEWKSAIEHMKNNSYSGIIDKLKI 417

Query: 234 SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTL 292
           S+DGL+  ++++FLDIACF +G ++DY+   LE C      G+R+LI+K L+ +   N +
Sbjct: 418 SYDGLEPKQQEMFLDIACFLRGEEKDYILQILESCHIGAEYGLRILIDKSLVFISEYNQV 477

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            MHDL+Q++G+ IV  Q  ++ G+RSRLW  +EV  V++ +TGT  +E I + +Y     
Sbjct: 478 QMHDLIQDMGKYIVNFQ--KDPGERSRLWLAKEVEEVMSNNTGTMAMEAIWVSSYSST-- 533

Query: 353 VYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
             L  S +A   M  LR+  +        ++YL N LR      YP +  PS  ++   +
Sbjct: 534 --LRFSNQAVKNMKRLRVFNMGRSSTHYAIDYLPNNLRCFVCTNYPWESFPSTFELKMLV 591

Query: 413 EIYMCYSRIGELWKGIK 429
            + + ++ +  LW   K
Sbjct: 592 HLQLRHNSLRHLWTETK 608


>gi|297791293|ref|XP_002863531.1| hypothetical protein ARALYDRAFT_494475 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309366|gb|EFH39790.1| hypothetical protein ARALYDRAFT_494475 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1158

 Score =  287 bits (735), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 244/760 (32%), Positives = 362/760 (47%), Gaps = 105/760 (13%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
            R+IG+ GM G+GKTT+ + +Y     +F     +D +R  S+   L  L   LL +LL 
Sbjct: 240 TRVIGVVGMPGIGKTTLLKELYKTWKGKFSRYALIDQIRGKSNNFRLECLPTLLLEKLLP 299

Query: 79  LADN-SIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGN------REWFGSGSR 131
             +N  I +V +        L+ +KVL+V+DDV + +Q+ +L G        EW   GSR
Sbjct: 300 ELNNLQIDSVEEPYKTHKGLLRERKVLVVLDDVSEREQIYALLGKYDLQNKHEWIKDGSR 359

Query: 132 IIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ---PLQECVQLSARIIR 188
           I+I + D+ LLK   V + Y    LN+ + LQLF   AF   Q   P  + ++LS   + 
Sbjct: 360 IVIATNDKSLLKGL-VHDTYVVRQLNHRDGLQLFRYHAFHDDQAIAPKVDFMKLSDEFVH 418

Query: 189 YAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLD 248
           YA G PLAL++LG  L  +++  W + L+ L   P + I +++Q+SFD L   +K  FLD
Sbjct: 419 YARGHPLALKILGRELYEKNMKHWETKLKILAQSPTTYIGEVVQVSFDELSMAQKDAFLD 478

Query: 249 IACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQR 308
           IACF +  D DYV + L          I+ L  K LI   +  + MHDLL    +++  R
Sbjct: 479 IACF-RSQDVDYVESLLVSSDPGSAEAIKALKNKFLIDTCDGRVEMHDLLYTFSRELDLR 537

Query: 309 QSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNL 368
            S +           +++ +V  ++ G   V GI LD    + E  L    + F  M NL
Sbjct: 538 ASTQV----------QDIINVQQKTMGAADVRGIFLDLSEVKGETSL--DREHFKNMRNL 585

Query: 369 RLLKICN------------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYM 416
             LK  N            + +P+GLE     +R L W  +PL+ LP++      +++ +
Sbjct: 586 WYLKFYNSHCPQECKTNNKINMPDGLELPLKEVRCLHWLKFPLEELPNDFDPINLVDLKL 645

Query: 417 CYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLL 476
            YS I  LW+G+K    LK + L+HS  L  +   + A NL++L LEGCT L        
Sbjct: 646 TYSEIERLWEGVKDTPVLKWVDLNHSSKLCSLSGLSKAQNLQRLNLEGCTSL-------- 697

Query: 477 LHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREF 536
                                    +SL  +NL S          L TL +S    F+EF
Sbjct: 698 -------------------------ESLRNVNLMS----------LKTLTLSNCSNFKEF 722

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
           P I E++E    L+L+GTAI  LP ++  L  LVLLN+K+C+ LE +   +  LK L+ L
Sbjct: 723 PLIPENLE---ALYLDGTAISQLPDNVVNLKRLVLLNMKDCKMLETISTCLGELKALQKL 779

Query: 597 KLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPS 656
            LSGC KLK+FPEI +S   L  L LDGTSIK +P     L  ++ L LS   ++  L  
Sbjct: 780 VLSGCLKLKEFPEINKS--SLKFLLLDGTSIKTMPQ----LHSVQYLCLSRNDHISYLRV 833

Query: 657 SIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKS 716
            I  L  L  L+L  C KL  VPE    ++ L+          H  S    +   L R  
Sbjct: 834 GINQLSQLTRLDLKYCTKLTYVPELPPTLQYLD---------AHGCSSLKNVATPLAR-- 882

Query: 717 VALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLK 756
               + ++   C+    N T+C  +E A   +I +    K
Sbjct: 883 ---IVSTVQNHCT---FNFTNCGNLEQAAKEEITSYAQRK 916



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 206/459 (44%), Gaps = 85/459 (18%)

Query: 572  LNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVP 631
            LNL+ C SLE L     NL  L++L LS CS  K+FP I    ++L  L+LDGT+I ++P
Sbjct: 689  LNLEGCTSLESLRNV--NLMSLKTLTLSNCSNFKEFPLIP---ENLEALYLDGTAISQLP 743

Query: 632  SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
             ++  L +L LLN+ DCK L  + + +  LK+L+ L LSGC K          ++   E+
Sbjct: 744  DNVVNLKRLVLLNMKDCKMLETISTCLGELKALQKLVLSGCLK----------LKEFPEI 793

Query: 692  DISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGN 751
            + S                                  SL+ L      L++G     +  
Sbjct: 794  NKS----------------------------------SLKFL------LLDGTSIKTMPQ 813

Query: 752  LCSLKELYLSKNSFVS-LPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
            L S++ L LS+N  +S L   I  LS+L  ++L+ C +L  +P+LPP ++ +  +GC+SL
Sbjct: 814  LHSVQYLCLSRNDHISYLRVGINQLSQLTRLDLKYCTKLTYVPELPPTLQYLDAHGCSSL 873

Query: 811  VTLLDALKLCKSDSTMIACLDSLKLLGN-----KSLAFSMLREYLEAVSNTRQH------ 859
              +   L    S +    C  +    GN     K    S  +   + + + R+H      
Sbjct: 874  KNVATPLARIVS-TVQNHCTFNFTNCGNLEQAAKEEITSYAQRKCQLLPDARKHYNEGLS 932

Query: 860  ----LSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNN 915
                 S   PG E+P WF ++  GS +      + ++ ++L G A+C V   L+     +
Sbjct: 933  SEALFSTCFPGCEVPSWFCHEAVGSLLQRKLLPH-WHDERLSGIALCAVVSFLEGQDQIS 991

Query: 916  CFGSYPTHQLNCHIGHGI-----YGIGFR--DKFGQAGSDHLWLLYLSRQTCYD-IRLPL 967
            CF    T ++       +      GI  R  D+  +  SDH+++ Y+S   C + IR   
Sbjct: 992  CFSVTCTFKIKAEDNSWVPFTCPVGIWTREGDEKDKIESDHVFIAYIS---CPNTIRRLE 1048

Query: 968  ESNLEPFESNHVNVSFEPWLGQGL-EVKMCGLHPVYMDE 1005
            + N +       ++ F    G G+ +V  CGL  VY ++
Sbjct: 1049 DQNSDKCNFTEASLEFTVTSGIGVFKVLKCGLSLVYEND 1087


>gi|37574595|gb|AAQ93074.1| putative TIR-NBS type R protein 4 [Malus baccata]
          Length = 726

 Score =  287 bits (734), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 180/405 (44%), Positives = 261/405 (64%), Gaps = 10/405 (2%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQ 75
           S DVR+IGI GMGG+GKTTI + +Y+     FE   FL+ VRE      LV LQ+QLL  
Sbjct: 317 SDDVRVIGISGMGGIGKTTIVKAIYNEFYERFEGKSFLEKVRE----KKLVKLQKQLLFD 372

Query: 76  LLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIIT 135
           +L+     + +V  G  ++G R +R +VL+++DDV DVKQL+ L GN   FG GSRIIIT
Sbjct: 373 ILQ-TKTKVSSVAVGTALVGERFRRLRVLVIVDDVDDVKQLRELVGNCHSFGPGSRIIIT 431

Query: 136 SRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPL 195
           +R+E +LK   VDE+Y+ +G++ +EAL+L +  AFK+     + + L+  ++ Y GGLPL
Sbjct: 432 TRNERVLKEFAVDEIYRENGMDQEEALELLSWHAFKSSWCPSQYLVLTREVVNYCGGLPL 491

Query: 196 ALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE-LEKKIFLDIACFFK 254
           ALEVLGS +  RSV+EWRS L+ L++ P  EI   L+IS+DGL +  +++IFLDIA FF 
Sbjct: 492 ALEVLGSTIFKRSVNEWRSILDELKMIPRGEIQAQLKISYDGLNDHYKRQIFLDIAFFFI 551

Query: 255 GNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELGQQIVQRQSPEE 313
           G D++ V   L+GCGF+   GI VL+++CL+T+   N + MHDLL+++G+ IV  ++P  
Sbjct: 552 GMDKNDVMQILDGCGFYATTGIEVLLDRCLVTIGRKNKIMMHDLLRDMGRDIVHAENPGF 611

Query: 314 LGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI 373
             +RSRLW  ++V  VL + +GTE +EG+ L+    E   +   S  AF  M  LRLL++
Sbjct: 612 PRERSRLWHPKDVHDVLIDKSGTEKIEGLALNLPSLEETSF---STDAFRNMKRLRLLQL 668

Query: 374 CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
             ++L  G   LS +LR L W G+PL+F+P  L     + I M Y
Sbjct: 669 NYVRLTGGYRCLSKKLRWLCWHGFPLEFIPIELCQPNIVAIDMQY 713


>gi|37574599|gb|AAQ93076.1| putative TIR-NBS type R protein 4 [Malus baccata]
          Length = 726

 Score =  287 bits (734), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 179/405 (44%), Positives = 260/405 (64%), Gaps = 10/405 (2%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQ 75
           S DVR+IGI G GG+GKTTI + +Y+     FE   FL+ VRE      LV LQ+QLL  
Sbjct: 317 SDDVRVIGISGSGGIGKTTIVKAIYNEFYERFEGKSFLEKVRE----KKLVKLQKQLLFD 372

Query: 76  LLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIIT 135
           +L+     + +V  G  ++G R +R +VL+++DDV DVKQL+ L GN   FG GSRIIIT
Sbjct: 373 ILQ-TKTKVSSVAVGTALVGERFRRLRVLVIVDDVDDVKQLRELVGNCHSFGPGSRIIIT 431

Query: 136 SRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPL 195
           +R+E +LK   VDE+Y+ +G++ +EAL+L +  AFK+     + + L+  ++ Y GGLPL
Sbjct: 432 TRNERVLKEFAVDEIYRENGMDQEEALELLSWHAFKSSWCPSQYLVLTREVVNYCGGLPL 491

Query: 196 ALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE-LEKKIFLDIACFFK 254
           ALEVLGS +  RSV+EWRS L+ L++ P  EI   L+IS+DGL +  +++IFLDIA FF 
Sbjct: 492 ALEVLGSTIFKRSVNEWRSILDELKMIPRGEIQAQLKISYDGLNDHYKRQIFLDIAFFFI 551

Query: 255 GNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELGQQIVQRQSPEE 313
           G D++ V   L+GCGF+   GI VL+++CL+T+   N + MHDLL+++G+ IV  ++P  
Sbjct: 552 GMDKNDVMQILDGCGFYATTGIEVLLDRCLVTIGRKNKIMMHDLLRDMGRDIVHAENPGF 611

Query: 314 LGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI 373
             +RSRLW  ++V  VL + +GTE +EG+ L+    E   +   S  AF  M  LRLL++
Sbjct: 612 PRERSRLWHPKDVHDVLIDKSGTEKIEGLALNLPSLEETSF---STDAFRNMKRLRLLQL 668

Query: 374 CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
             ++L  G   LS +LR L W G+PL+F+P  L     + I M Y
Sbjct: 669 NYVRLTGGYRCLSKKLRWLCWHGFPLEFIPIELCQPNIVAIDMQY 713


>gi|357499539|ref|XP_003620058.1| Resistance protein [Medicago truncatula]
 gi|355495073|gb|AES76276.1| Resistance protein [Medicago truncatula]
          Length = 1907

 Score =  286 bits (733), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 204/609 (33%), Positives = 311/609 (51%), Gaps = 97/609 (15%)

Query: 21  MIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLA 80
           M+GI G+GGLGK+T+AR +Y+ ++ +FE   FL +VRE S++  L  LQ +LL   LK  
Sbjct: 1   MVGIFGIGGLGKSTLARAIYNFVADQFEGLCFLHDVRENSAQNDLKHLQEKLL---LKTT 57

Query: 81  DNSIW--NVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAG----------------- 121
            + I   +V +GI  +  RL RKK+LL++DDV D KQL +LAG                 
Sbjct: 58  GSKIKLDHVCEGIPFIKERLCRKKILLILDDVDDRKQLHALAGGLALVEKAKLVTEKMKF 117

Query: 122 ---------------------------------NREWFGSGSRIIITSRDEHLLKTHGVD 148
                                            + +WFG GSR+IIT+R++HLL +H ++
Sbjct: 118 LTNSMVAKFSDGIREGFHVFPHKISLTNFCFFSSVDWFGPGSRVIITTRNKHLLASHRIE 177

Query: 149 EVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRS 208
           + Y   GLN  +AL+L    AFK          +  R + YA GLPL LEV+GS L G++
Sbjct: 178 KTYPVEGLNGIDALELLRWMAFKNDNVPSGYEDILNRAVAYASGLPLVLEVMGSNLFGKN 237

Query: 209 VDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGC 268
           ++EW++TL+  +  P  EI  IL++S+D L+E E+ +FLDIAC  KG     V N L   
Sbjct: 238 IEEWKNTLDGYDRIPNKEIQKILRVSYDALEEEEQSVFLDIACCLKGYRLTEVENILHSH 297

Query: 269 GFHPVI-GIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVC 327
             H +   +RVL EK LI  +   + +H+L++++G+++V+++S +E G+RSRL   +++ 
Sbjct: 298 YDHCITHHLRVLAEKSLIDTNYCYVTLHNLIEDMGKEVVRQESIKEPGERSRLCCHDDIV 357

Query: 328 HVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSN 387
           +VL E+TGT  ++ + ++   H  E  +     AF KMT L+ L I N     GL+YL +
Sbjct: 358 NVLKENTGTSKIQMMYMN--FHSMESIIDQKGMAFKKMTRLKTLIIENGHCSKGLKYLPS 415

Query: 388 RLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIR 447
            L+ L W G                    C S+        K    + V+ L H + L  
Sbjct: 416 SLKALKWEG--------------------CLSKSLSSSILSKKFPDMTVLTLDHCKYLTH 455

Query: 448 MPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL 507
           +PD +G  NLEKL  E C  L  IH S+   NKL  L+   C      P  + + SL++L
Sbjct: 456 IPDVSGLSNLEKLSFEYCDNLITIHNSIGHLNKLERLSAFGCREFKRFP-PLGLASLKEL 514

Query: 508 NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
           NL+   +  S                  FPE++  M ++  + L+ T+I  LP S + LS
Sbjct: 515 NLRYCESLDS------------------FPELLCKMTNIDNIWLQHTSIGELPFSFQNLS 556

Query: 568 GLVLLNLKN 576
            L  L++ N
Sbjct: 557 ELDELSVVN 565



 Score =  266 bits (681), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 186/579 (32%), Positives = 318/579 (54%), Gaps = 47/579 (8%)

Query: 1    MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
            + S+ ++++ ++D+GS D V M+GI G+GGLGK+T+AR +Y+L++ +FE   FL NVR  
Sbjct: 941  LQSQVQRVKSILDNGSDDGVHMVGIFGIGGLGKSTLARAIYNLVADQFEGLCFLHNVRMN 1000

Query: 60   SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            S+K  L  LQ +LL +    ++ ++ +V DGI ++  RL RKK+LL++DDV  + QLQ+L
Sbjct: 1001 SAKNNLEHLQEKLLFKTTG-SEINLDHVSDGIPIIKERLCRKKILLILDDVDKLDQLQAL 1059

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            AG  +WFG GSR+IIT+RD+HLL  HG+++ Y   GLN  EAL+L    AFK+       
Sbjct: 1060 AGGLDWFGPGSRVIITTRDKHLLDHHGIEKTYAVKGLNGTEALELLRWMAFKSDNVPSRY 1119

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             ++ +R + Y  GLPL +E++GS L G++++EW+  L+  +  P  EI  IL++S+D L+
Sbjct: 1120 KEILSRAVSYVSGLPLVIEIVGSNLFGKNIEEWKYILDGYDRIPNKEIQKILRVSYDALE 1179

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVI-GIRVLIEKCLITVHN--NTLWMHD 296
            E E+ +FLDIAC FKG+  +     L     H +   + VL EK LI  +     + +HD
Sbjct: 1180 EEEQSVFLDIACCFKGHGWEDAKYMLHAHYGHSITHHLAVLAEKSLINQYREYGCVTLHD 1239

Query: 297  LLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLC 356
            L++++G+++V+++S +E G+RSRL  ++++  VL E+T  + ++ + LD+  +   +   
Sbjct: 1240 LIEDMGKEVVRQESTKEPGERSRLCCQDDITRVLRENTKFQNMKILTLDDCEYLTHI--- 1296

Query: 357  ASAKAFSKMTNLRLLKICNL-QLPNGLEYLSN--RLRLLGWRGYPLKFLPSNLQMDKTIE 413
                + S +  L      NL  + N + +LS   RL + G+R     F P  L   K + 
Sbjct: 1297 PDVSSLSNLEKLSFEHCKNLITIHNSIGHLSKLERLSVTGYRKLK-HFPPLGLASLKELN 1355

Query: 414  IY--MCYSRIGELWKGIKHLDKLKVMILS------HSENLIRMPDFTGAPNLEKLILEGC 465
            +    C     EL   + H+ ++ +  +S        +NL  + +FT +  + +   E  
Sbjct: 1356 LMGGSCLENFPELLCKMAHIKEIDIFYISIGKLPFSFQNLSELDEFTVSYGILRFP-EHN 1414

Query: 466  TRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTL 525
             ++Y I     + + +  L++ DC                 L+ + LP  +     ++ L
Sbjct: 1415 DKMYSI-----VFSNMTKLSLFDCY----------------LSDECLPILLKWCVNMTYL 1453

Query: 526  DVSGDLKFREFPEIVEHMEHLSELHLEG----TAIRGLP 560
            D+S    F+  PE +    HL E+ +        IRG+P
Sbjct: 1454 DLSYS-DFKILPECLSESHHLVEIIVRYCKSLEEIRGIP 1491



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 151/345 (43%), Gaps = 55/345 (15%)

Query: 588  SNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLS 646
            +  + ++ L L  C  L   P+ V S+ +L +L F    ++  + +SI  L+KLE L+++
Sbjct: 1277 TKFQNMKILTLDDCEYLTHIPD-VSSLSNLEKLSFEHCKNLITIHNSIGHLSKLERLSVT 1335

Query: 647  DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDI---SGTAVPHSTS 703
              + L   P   + L SLK LNL G   LEN PE L ++  ++E+DI   S   +P S  
Sbjct: 1336 GYRKLKHFPP--LGLASLKELNLMGGSCLENFPELLCKMAHIKEIDIFYISIGKLPFSFQ 1393

Query: 704  WYSYIPINLMRKSVALKLPSLSG------LCSLRKLNLTDCNLMEGALPSDIGNLCSLKE 757
              S +    +   + L+ P  +         ++ KL+L DC L +  LP  +    ++  
Sbjct: 1394 NLSELDEFTVSYGI-LRFPEHNDKMYSIVFSNMTKLSLFDCYLSDECLPILLKWCVNMTY 1452

Query: 758  LYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDAL 817
            L LS + F  LP  ++    L+ I +  CK L+ +  +PPN+  +    C SL       
Sbjct: 1453 LDLSYSDFKILPECLSESHHLVEIIVRYCKSLEEIRGIPPNLGSLYAYECKSL------- 1505

Query: 818  KLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSE--IPEWFMY 875
                                + S    ++ + L     TR        G+E  IP+WF +
Sbjct: 1506 --------------------SSSCRRMLMSQQLHEARCTRFDFP---NGTELGIPDWFEH 1542

Query: 876  QNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSY 920
            Q+ G +I+       +  K++   +I C+F +L   R  + F  Y
Sbjct: 1543 QSRGDTIS------FWFHKEIP--SISCIF-ILPERRWASNFSLY 1578



 Score = 47.0 bits (110), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 4/109 (3%)

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
           SI  L+ L  L+   CR  +  P     L  L+ L L  C  L  FPE++  M ++  ++
Sbjct: 482 SIGHLNKLERLSAFGCREFKRFPPL--GLASLKELNLRYCESLDSFPELLCKMTNIDNIW 539

Query: 622 LDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLS 670
           L  TSI E+P S + L++L+   LS    ++R P     + S+  LN++
Sbjct: 540 LQHTSIGELPFSFQNLSELD--ELSVVNGMLRFPKQNDKMYSIVFLNVT 586


>gi|62319955|dbj|BAD94052.1| disease resistance - like protein [Arabidopsis thaliana]
          Length = 1007

 Score =  286 bits (732), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 216/622 (34%), Positives = 321/622 (51%), Gaps = 47/622 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-- 58
           M +  E+   L+     +VRMIGI G  G+GKTTIA  ++D  S  F  +  + ++RE  
Sbjct: 216 MAAHMERTEQLLRLDLDEVRMIGILGPPGIGKTTIATCMFDRFSRRFPFAAIMTDIRECY 275

Query: 59  ----ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
               ++ +   + LQ Q+LSQ+    D  I      + +   RL+ KKV LV+D+V  + 
Sbjct: 276 PRLCLNERNAQLKLQEQMLSQIFNQKDTMI----SHLGVAPERLKDKKVFLVLDEVGHLG 331

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL +LA    WFG GSRIIIT+ D  +LK HG++ VYK    + DEA Q+F M AF   Q
Sbjct: 332 QLDALAKETRWFGPGSRIIITTEDLGVLKAHGINHVYKVGYPSNDEAFQIFCMNAFGQKQ 391

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           P +    L+  +   AG LPL L+VLGS L G S  EW  TL RL      +I +I+Q S
Sbjct: 392 PCEGFCDLAWEVKALAGELPLGLKVLGSALRGMSKPEWERTLPRLRTSLDGKIGNIIQFS 451

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
           +D L + +K +FL IAC F       V   L G       G+ VL +K LI+ +  T+ M
Sbjct: 452 YDALCDEDKYLFLYIACLFNYESTTKVKELL-GKFLDVKQGLHVLAQKSLISFYGETIRM 510

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLW-KEEEVCHVLTEST-GTELVEGIVLDNYHHENE 352
           H LL++ G++   +Q      ++ +L   E ++C VL + T       GI LD   +E E
Sbjct: 511 HTLLEQFGRETSCKQFVHHGYRKHQLLVGERDICEVLDDDTRDNRRFIGINLDLRKNEKE 570

Query: 353 VYLCASAKAFSKMTNLRLLKICN---------------------LQLP-NGLEYLSNRLR 390
           + +  S K   +M + + ++I +                     +QL    L Y S R+R
Sbjct: 571 LKI--SEKTLERMHDFQFVRINDVFTHKERQKLLHFKIIHQPERVQLALEDLIYHSPRIR 628

Query: 391 LLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD 450
            L W GY    LPS    +  +E+ M  S++ +LW+G K L  LK M LS SE+L  +P+
Sbjct: 629 SLKWFGYQNICLPSTFNPEFLVELDMSSSKLRKLWEGTKQLRNLKWMDLSDSEDLKELPN 688

Query: 451 FTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK 510
            + A NLE+L L  C+ L E+  S+     L IL++  C+SL+ LP       LEKL+L+
Sbjct: 689 LSTATNLEELKLRRCSSLVELPSSIEKLTSLQILDLHSCSSLVELPSFGNATKLEKLDLE 748

Query: 511 S------LPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLS- 562
           +      LP +I+    L  L +    +  E P I E+  +L EL L+  +++  LPLS 
Sbjct: 749 NCSSLVKLPPSINA-NNLQELSLRNCSRVVELPAI-ENATNLRELKLQNCSSLIELPLSW 806

Query: 563 IELLSGLVLLNLKNCRSLEILP 584
           ++ +S L +L L NC +L  LP
Sbjct: 807 VKRMSRLRVLTLNNCNNLVSLP 828



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 170/363 (46%), Gaps = 51/363 (14%)

Query: 524 TLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE-- 581
           TL+   D +F    ++  H E    LH +   I   P  ++L    ++ +    RSL+  
Sbjct: 577 TLERMHDFQFVRINDVFTHKERQKLLHFK---IIHQPERVQLALEDLIYHSPRIRSLKWF 633

Query: 582 -----ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIE 635
                 LP T  N + L  L +S  SKL+K  E  + +++L  + L D   +KE+P+ + 
Sbjct: 634 GYQNICLPSTF-NPEFLVELDMSS-SKLRKLWEGTKQLRNLKWMDLSDSEDLKELPN-LS 690

Query: 636 LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
             T LE L L  C +LV LPSSI  L SL+ L+L  C  L  +P + G    LE+LD+  
Sbjct: 691 TATNLEELKLRRCSSLVELPSSIEKLTSLQILDLHSCSSLVELP-SFGNATKLEKLDLEN 749

Query: 696 TAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSL 755
                               S  +KLP      +L++L+L +C+ +   LP+ I N  +L
Sbjct: 750 C-------------------SSLVKLPPSINANNLQELSLRNCSRV-VELPA-IENATNL 788

Query: 756 KELYLSK-NSFVSLPTS-ITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL 813
           +EL L   +S + LP S +  +S+L  + L +C  L SLPQLP ++  +  + C SL   
Sbjct: 789 RELKLQNCSSLIELPLSWVKRMSRLRVLTLNNCNNLVSLPQLPDSLDYIYADNCKSL--- 845

Query: 814 LDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWF 873
                       +  C ++ ++       F + +E  + + +T      ++PG+++P  F
Sbjct: 846 ----------ERLDCCFNNPEISLYFPNCFKLNQEARDLIMHTSTSRFAMLPGTQVPACF 895

Query: 874 MYQ 876
           +++
Sbjct: 896 IHR 898


>gi|15229962|ref|NP_190026.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|186510665|ref|NP_001118772.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|7529774|emb|CAB86918.1| disease resistence-like protein [Arabidopsis thaliana]
 gi|332644378|gb|AEE77899.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644379|gb|AEE77900.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1007

 Score =  286 bits (732), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 216/622 (34%), Positives = 321/622 (51%), Gaps = 47/622 (7%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-- 58
           M +  E+   L+     +VRMIGI G  G+GKTTIA  ++D  S  F  +  + ++RE  
Sbjct: 216 MAAHMERTEQLLRLDLDEVRMIGILGPPGIGKTTIATCMFDRFSRRFPFAAIMTDIRECY 275

Query: 59  ----ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
               ++ +   + LQ Q+LSQ+    D  I      + +   RL+ KKV LV+D+V  + 
Sbjct: 276 PRLCLNERNAQLKLQEQMLSQIFNQKDTMI----SHLGVAPERLKDKKVFLVLDEVGHLG 331

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL +LA    WFG GSRIIIT+ D  +LK HG++ VYK    + DEA Q+F M AF   Q
Sbjct: 332 QLDALAKETRWFGPGSRIIITTEDLGVLKAHGINHVYKVGYPSNDEAFQIFCMNAFGQKQ 391

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           P +    L+  +   AG LPL L+VLGS L G S  EW  TL RL      +I +I+Q S
Sbjct: 392 PCEGFCDLAWEVKALAGELPLGLKVLGSALRGMSKPEWERTLPRLRTSLDGKIGNIIQFS 451

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
           +D L + +K +FL IAC F       V   L G       G+ VL +K LI+ +  T+ M
Sbjct: 452 YDALCDEDKYLFLYIACLFNYESTTKVKELL-GKFLDVKQGLHVLAQKSLISFYGETIRM 510

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLW-KEEEVCHVLTEST-GTELVEGIVLDNYHHENE 352
           H LL++ G++   +Q      ++ +L   E ++C VL + T       GI LD   +E E
Sbjct: 511 HTLLEQFGRETSCKQFVHHGYRKHQLLVGERDICEVLDDDTRDNRRFIGINLDLRKNEKE 570

Query: 353 VYLCASAKAFSKMTNLRLLKICN---------------------LQLP-NGLEYLSNRLR 390
           + +  S K   +M + + ++I +                     +QL    L Y S R+R
Sbjct: 571 LKI--SEKTLERMHDFQFVRINDVFTHKERQKLLHFKIIHQPERVQLALEDLIYHSPRIR 628

Query: 391 LLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPD 450
            L W GY    LPS    +  +E+ M  S++ +LW+G K L  LK M LS SE+L  +P+
Sbjct: 629 SLKWFGYQNICLPSTFNPEFLVELDMSSSKLRKLWEGTKQLRNLKWMDLSDSEDLKELPN 688

Query: 451 FTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLK 510
            + A NLE+L L  C+ L E+  S+     L IL++  C+SL+ LP       LEKL+L+
Sbjct: 689 LSTATNLEELKLRRCSSLVELPSSIEKLTSLQILDLHSCSSLVELPSFGNATKLEKLDLE 748

Query: 511 S------LPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG-TAIRGLPLS- 562
           +      LP +I+    L  L +    +  E P I E+  +L EL L+  +++  LPLS 
Sbjct: 749 NCSSLVKLPPSINA-NNLQELSLRNCSRVVELPAI-ENATNLRELKLQNCSSLIELPLSW 806

Query: 563 IELLSGLVLLNLKNCRSLEILP 584
           ++ +S L +L L NC +L  LP
Sbjct: 807 VKRMSRLRVLTLNNCNNLVSLP 828



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 170/363 (46%), Gaps = 51/363 (14%)

Query: 524 TLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE-- 581
           TL+   D +F    ++  H E    LH +   I   P  ++L    ++ +    RSL+  
Sbjct: 577 TLERMHDFQFVRINDVFTHKERQKLLHFK---IIHQPERVQLALEDLIYHSPRIRSLKWF 633

Query: 582 -----ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIE 635
                 LP T  N + L  L +S  SKL+K  E  + +++L  + L D   +KE+P+ + 
Sbjct: 634 GYQNICLPSTF-NPEFLVELDMSS-SKLRKLWEGTKQLRNLKWMDLSDSEDLKELPN-LS 690

Query: 636 LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
             T LE L L  C +LV LPSSI  L SL+ L+L  C  L  +P + G    LE+LD+  
Sbjct: 691 TATNLEELKLRRCSSLVELPSSIEKLTSLQILDLHSCSSLVELP-SFGNATKLEKLDLEN 749

Query: 696 TAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSL 755
                               S  +KLP      +L++L+L +C+ +   LP+ I N  +L
Sbjct: 750 C-------------------SSLVKLPPSINANNLQELSLRNCSRV-VELPA-IENATNL 788

Query: 756 KELYLSK-NSFVSLPTS-ITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL 813
           +EL L   +S + LP S +  +S+L  + L +C  L SLPQLP ++  +  + C SL   
Sbjct: 789 RELKLQNCSSLIELPLSWVKRMSRLRVLTLNNCNNLVSLPQLPDSLDYIYADNCKSL--- 845

Query: 814 LDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWF 873
                       +  C ++ ++       F + +E  + + +T      ++PG+++P  F
Sbjct: 846 ----------ERLDCCFNNPEISLYFPNCFKLNQEARDLIMHTSTSRFAMLPGTQVPACF 895

Query: 874 MYQ 876
           +++
Sbjct: 896 IHR 898


>gi|297837267|ref|XP_002886515.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332356|gb|EFH62774.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1028

 Score =  286 bits (732), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 200/622 (32%), Positives = 309/622 (49%), Gaps = 67/622 (10%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-- 58
           +++    ++ L+D  +  V M+GI G  G+GKTTIAR + +L S+ F+ S F+DN R   
Sbjct: 189 LETHLRMMQSLLDLDNDGVMMVGISGPAGIGKTTIARALKNLFSNRFQLSCFMDNFRGSY 248

Query: 59  ---ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQ 115
                  G  + LQ +LLS++L  +   I      + ++  RL   KVL+++DDV DVKQ
Sbjct: 249 PIGFDEYGFKLRLQEELLSKILNQSGMRI----SHLGVIQERLCDMKVLIILDDVNDVKQ 304

Query: 116 LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP 175
           L++L     WFG GSRII+T+ ++ +L  HG+D VY     + +EAL++    AFK   P
Sbjct: 305 LEALVNENSWFGPGSRIIVTTENKEILHRHGIDNVYNVGFPSDEEALKILCRYAFKQSSP 364

Query: 176 LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
               + ++  + +  G LPL L V+GS L G++ DEW+  + RLE     EI ++L++ +
Sbjct: 365 RHSFLMMAKWVAQLCGNLPLGLRVVGSSLHGKNEDEWKYIVRRLETIMDGEIEEVLRVGY 424

Query: 236 DGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWM 294
           + L E E+ +FL IA FF   D D V   L         G+++LI K LI + +   + M
Sbjct: 425 ESLHENEQTLFLHIAIFFNYEDGDLVKAMLADNSLDIEHGLKILINKSLIHISSKGEILM 484

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           H+LLQ++G+Q ++RQ P    KR  L   +E+C VL  +T                    
Sbjct: 485 HNLLQQMGRQAIRRQEP---WKRRILIDAQEICDVLENNT-------------------- 521

Query: 355 LCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEI 414
                               N  +P  ++YL   LRLL W  YP K LP     +  +E+
Sbjct: 522 --------------------NAHIPEEMDYLPP-LRLLRWEAYPSKTLPLRFCPENLVEL 560

Query: 415 YMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPS 474
            M  S++ +LW+G + L  LK M LS S  L  +PD + A NLE L L GCT L E+  S
Sbjct: 561 SMEDSQLKKLWEGTQLLTNLKKMDLSRSLELKELPDLSNATNLETLELSGCTSLVELPSS 620

Query: 475 LLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPTTISGLKCLSTLDVS 528
           +    KL  + M  C  L  +P  I + SL++++      L S P   + +  L   D S
Sbjct: 621 IANLQKLEDIMMNSCQKLEVIPTNINLTSLKRIHMAGCSRLASFPNFSTNITALDISDTS 680

Query: 529 GDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVS 588
            D+     P ++ H  HL  + + G   RG   +     G V     +   ++ +P  + 
Sbjct: 681 VDV----LPALIVHWSHLYYIDIRG---RGKYKNASNFPGCVGRLDLSYTDVDKIPDCIK 733

Query: 589 NLKCLRSLKLSGCSKLKKFPEI 610
           +L  L+ + LS C KL   PE+
Sbjct: 734 DLLWLQRIYLSCCRKLTSLPEL 755



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 144/342 (42%), Gaps = 67/342 (19%)

Query: 544 EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
           E+L EL +E + ++ L    +LL+ L  ++L     L+ LP  +SN   L +L+LSGC  
Sbjct: 555 ENLVELSMEDSQLKKLWEGTQLLTNLKKMDLSRSLELKELP-DLSNATNLETLELSGC-- 611

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
                                TS+ E+PSSI  L KLE + ++ C+ L  +P++I  L S
Sbjct: 612 ---------------------TSLVELPSSIANLQKLEDIMMNSCQKLEVIPTNI-NLTS 649

Query: 664 LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPH-STSWYSYIPINLMRKSVALKLP 722
           LK ++++GC +L + P     I +L+  D S   +P     W     I++  +       
Sbjct: 650 LKRIHMAGCSRLASFPNFSTNITALDISDTSVDVLPALIVHWSHLYYIDIRGRGKYKNAS 709

Query: 723 SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIE 782
           +  G      L+ TD +     +P  I +L  L+ +YLS                     
Sbjct: 710 NFPGCVGRLDLSYTDVD----KIPDCIKDLLWLQRIYLSC-------------------- 745

Query: 783 LEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLA 842
              C++L SLP+LP  +  +  + C  L  +   +    ++     C    KL G     
Sbjct: 746 ---CRKLTSLPELPNWLLLLIADNCELLERVTFPINSPNAELIFTNC---FKLDGETRKL 799

Query: 843 FSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
           F             +  LS  +PG  +P  F ++ +G+S+ V
Sbjct: 800 FIQ-----------QSFLSNCIPGRVMPSEFNHRAKGNSVMV 830


>gi|2245047|emb|CAB10466.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 1038

 Score =  286 bits (732), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 232/730 (31%), Positives = 357/730 (48%), Gaps = 100/730 (13%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQ 75
           S + RM+GI G  G+GK+TI + +Y  +  +F    F+ +V  + S+   + L + +L +
Sbjct: 202 SKEARMVGIWGPSGIGKSTIGKALYSQLFCQFHFHAFVPHVYSMKSEWEEIFLSK-ILGK 260

Query: 76  LLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIIT 135
            +K+           + ++   L +KKVL+V+DDV D + L++L G  +WFG GSRII+ 
Sbjct: 261 DIKIGGK--------LGVVEQMLNQKKVLIVLDDVDDPEFLKTLVGETKWFGPGSRIIVI 312

Query: 136 SRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPL 195
           ++D  LLK H +D +Y+    + D AL++    AF    P  +   L+  +   AG LPL
Sbjct: 313 TQDMQLLKAHDIDLLYEVKFPSLDLALKMLCRSAFGENSPPDDFKALAFEVAVLAGNLPL 372

Query: 196 ALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKG 255
            L VLGS L  R+ +EW   + R       +I+  L++S+D L + ++ +FL IAC F G
Sbjct: 373 GLSVLGSSLKRRTKEEWMEMMPRFRNGLNGDIMKTLRVSYDRLHQKDQDMFLYIACLFNG 432

Query: 256 NDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPEEL 314
            +  YV + LE       +G+ +L+EK LI +  +  + MH+LL++LG +I + +S    
Sbjct: 433 FEVSYVNDLLEDN-----VGVTMLVEKSLIRITPDGDIEMHNLLEKLGIEIDRAKSKGNP 487

Query: 315 GKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKIC 374
           GKR  L   E+        T  + V GI         E+ L    K+F  M NL+ L + 
Sbjct: 488 GKRRFLTDFED--------TLRKTVLGIRFCTAFRSKEL-LPIDEKSFQGMRNLQCLSVT 538

Query: 375 N--LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLD 432
              + LP  L YL  +LRLL W   PLK LP + + D  I++ M  S++ +LW+G   L 
Sbjct: 539 GDYMDLPQSLVYLPPKLRLLDWDRCPLKCLPYSFKADYLIQLTMMGSKLEKLWEGTVPLG 598

Query: 433 KLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSL 492
            LK M +  S  L  + D + A NLE+L L  C  L  +  S+    KLI L+M+ CT L
Sbjct: 599 SLKRMNMHGSRYLREISDLSNARNLEELNLSECRSLVTLSSSIQNAIKLIYLDMRGCTKL 658

Query: 493 ITLPGKILMKSLEKL------NLKSLP--------TTISGL----------KCLSTLD-- 526
            + P  + ++SLE L      NL++ P        T+  G+          K L  LD  
Sbjct: 659 ESFPTHLNLESLEYLGLLYYDNLRNFPVFKMETSTTSPHGIEIRVENCIWNKNLPGLDYL 718

Query: 527 --------------------VSGDLKFREFPEIVEHMEHLSELHL-------------EG 553
                               V G+    +  E V+ +  L E+ +             + 
Sbjct: 719 ACLVRCMPCEFRPNDLVRLIVRGNQMLEKLWEGVQSLASLVEMDMSECGNLTEIPDLSKA 778

Query: 554 TAIRGLPLS-----------IELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
           T +  L LS           I  L  LV L +K C  LE+LP  V NL  L+ L LSGCS
Sbjct: 779 TNLVNLYLSNCKSLVTVPSTIGNLQKLVRLEMKECTGLEVLPTDV-NLSSLKMLDLSGCS 837

Query: 603 KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
            L+ FP I +S+K    L+L+ T+I+EVP  IE  + L +L +  CK L  +  +I  L 
Sbjct: 838 SLRTFPLISKSIK---WLYLENTAIEEVPCCIENFSWLTVLMMYCCKRLKNISPNIFRLT 894

Query: 663 SLKTLNLSGC 672
            LK ++ + C
Sbjct: 895 ILKLVDFTEC 904



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 139/335 (41%), Gaps = 40/335 (11%)

Query: 491 SLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELH 550
           SL+ LP K+ +   ++  LK LP +      L  L + G  K  +  E    +  L  ++
Sbjct: 547 SLVYLPPKLRLLDWDRCPLKCLPYSFKA-DYLIQLTMMGS-KLEKLWEGTVPLGSLKRMN 604

Query: 551 LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPE- 609
           + G+        +     L  LNL  CRSL  L  ++ N   L  L + GC+KL+ FP  
Sbjct: 605 MHGSRYLREISDLSNARNLEELNLSECRSLVTLSSSIQNAIKLIYLDMRGCTKLESFPTH 664

Query: 610 -IVRSMKDLSELFLDG---------TSIKEVPSSIELLTKLELLN-----LSDCKNLVRL 654
             + S++ L  L+ D           +    P  IE+  +  + N     L     LVR 
Sbjct: 665 LNLESLEYLGLLYYDNLRNFPVFKMETSTTSPHGIEIRVENCIWNKNLPGLDYLACLVRC 724

Query: 655 PSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMR 714
                    L  L + G   LE + E +  + SL E+D+S                NL  
Sbjct: 725 MPCEFRPNDLVRLIVRGNQMLEKLWEGVQSLASLVEMDMSECG-------------NLT- 770

Query: 715 KSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSIT 773
                ++P LS   +L  L L++C  +   +PS IGNL  L  L + +      LPT + 
Sbjct: 771 -----EIPDLSKATNLVNLYLSNCKSLV-TVPSTIGNLQKLVRLEMKECTGLEVLPTDV- 823

Query: 774 HLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCA 808
           +LS L  ++L  C  L++ P +  +I+ + +   A
Sbjct: 824 NLSSLKMLDLSGCSSLRTFPLISKSIKWLYLENTA 858


>gi|186511937|ref|NP_193424.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658421|gb|AEE83821.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1040

 Score =  285 bits (730), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 221/700 (31%), Positives = 344/700 (49%), Gaps = 87/700 (12%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQ 75
           S + RM+GI G  G+GK+TI + +Y  +  +F    F+ +V  + S+   + L + +L +
Sbjct: 202 SKEARMVGIWGPSGIGKSTIGKALYSQLFCQFHFHAFVPHVYSMKSEWEEIFLSK-ILGK 260

Query: 76  LLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIIT 135
            +K+           + ++   L +KKVL+V+DDV D + L++L G  +WFG GSRII+ 
Sbjct: 261 DIKIGGK--------LGVVEQMLNQKKVLIVLDDVDDPEFLKTLVGETKWFGPGSRIIVI 312

Query: 136 SRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPL 195
           ++D  LLK H +D +Y+    + D AL++    AF    P  +   L+  +   AG LPL
Sbjct: 313 TQDMQLLKAHDIDLLYEVKFPSLDLALKMLCRSAFGENSPPDDFKALAFEVAVLAGNLPL 372

Query: 196 ALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKG 255
            L VLGS L  R+ +EW   + R       +I+  L++S+D L + ++ +FL IAC F G
Sbjct: 373 GLSVLGSSLKRRTKEEWMEMMPRFRNGLNGDIMKTLRVSYDRLHQKDQDMFLYIACLFNG 432

Query: 256 NDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPEEL 314
            +  YV + LE       +G+ +L+EK LI +  +  + MH+LL++LG +I + +S    
Sbjct: 433 FEVSYVNDLLEDN-----VGVTMLVEKSLIRITPDGDIEMHNLLEKLGIEIDRAKS---- 483

Query: 315 GKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKIC 374
                                 E V GI         E+ L    K+F  M NL+ L + 
Sbjct: 484 ---------------------KETVLGIRFCTAFRSKEL-LPIDEKSFQGMRNLQCLSVT 521

Query: 375 N--LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLD 432
              + LP  L YL  +LRLL W   PLK LP + + D  I++ M  S++ +LW+G   L 
Sbjct: 522 GDYMDLPQSLVYLPPKLRLLDWDRCPLKCLPYSFKADYLIQLTMMGSKLEKLWEGTVPLG 581

Query: 433 KLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSL 492
            LK M +  S  L  + D + A NLE+L L  C  L  +  S+    KLI L+M+ CT L
Sbjct: 582 SLKRMNMHGSRYLREISDLSNARNLEELNLSECRSLVTLSSSIQNAIKLIYLDMRGCTKL 641

Query: 493 ITLPGKILMKSLEKL-------NLKSLPTTISGLKC---------LSTLDVSGDLKFREF 536
            + P  + ++SLE L       NL  L      ++C         L  L V G+    + 
Sbjct: 642 ESFPTHLNLESLEYLENCIWNKNLPGLDYLACLVRCMPCEFRPNDLVRLIVRGNQMLEKL 701

Query: 537 PEIVEHMEHLSELHLEG------------------------TAIRGLPLSIELLSGLVLL 572
            E V+ +  L E+ +                           ++  +P +I  L  LV L
Sbjct: 702 WEGVQSLASLVEMDMSECGNLTEIPDLSKATNLVNLYLSNCKSLVTVPSTIGNLQKLVRL 761

Query: 573 NLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPS 632
            +K C  LE+LP  V NL  L+ L LSGCS L+ FP I +S+K    L+L+ T+I+EVP 
Sbjct: 762 EMKECTGLEVLPTDV-NLSSLKMLDLSGCSSLRTFPLISKSIK---WLYLENTAIEEVPC 817

Query: 633 SIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC 672
            IE  + L +L +  CK L  +  +I  L  LK ++ + C
Sbjct: 818 CIENFSWLTVLMMYCCKRLKNISPNIFRLTILKLVDFTEC 857



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 147/294 (50%), Gaps = 29/294 (9%)

Query: 541 EHMEHLSELHLEGTAIRGLPLS-IELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
           + M +L  L + G  +  LP S + L   L LL+   C  L+ LP +      L  L + 
Sbjct: 510 QGMRNLQCLSVTGDYM-DLPQSLVYLPPKLRLLDWDRC-PLKCLPYSF-KADYLIQLTMM 566

Query: 600 GCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSII 659
           G SKL+K  E    +  L  + + G+      S +     LE LNLS+C++LV L SSI 
Sbjct: 567 G-SKLEKLWEGTVPLGSLKRMNMHGSRYLREISDLSNARNLEELNLSECRSLVTLSSSIQ 625

Query: 660 ALKSLKTLNLSGCFKLENVPETLGQIESLEELD--ISGTAVPHSTSWY--------SYIP 709
               L  L++ GC KLE+ P  L  +ESLE L+  I    +P               + P
Sbjct: 626 NAIKLIYLDMRGCTKLESFPTHL-NLESLEYLENCIWNKNLPGLDYLACLVRCMPCEFRP 684

Query: 710 INLMR-----KSVALKL-PSLSGLCSLRKLNLTDC-NLMEGALPSDIGNLCSLKELYLSK 762
            +L+R       +  KL   +  L SL ++++++C NL E  +P D+    +L  LYLS 
Sbjct: 685 NDLVRLIVRGNQMLEKLWEGVQSLASLVEMDMSECGNLTE--IP-DLSKATNLVNLYLSN 741

Query: 763 -NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP--PNIRQVRVNGCASLVTL 813
             S V++P++I +L KL+ +E+++C  L+ LP      +++ + ++GC+SL T 
Sbjct: 742 CKSLVTVPSTIGNLQKLVRLEMKECTGLEVLPTDVNLSSLKMLDLSGCSSLRTF 795



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 146/350 (41%), Gaps = 67/350 (19%)

Query: 491 SLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELH 550
           SL+ LP K+ +   ++  LK LP +      L  L + G  K  +  E    +  L  ++
Sbjct: 530 SLVYLPPKLRLLDWDRCPLKCLPYSFKA-DYLIQLTMMGS-KLEKLWEGTVPLGSLKRMN 587

Query: 551 LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPE- 609
           + G+        +     L  LNL  CRSL  L  ++ N   L  L + GC+KL+ FP  
Sbjct: 588 MHGSRYLREISDLSNARNLEELNLSECRSLVTLSSSIQNAIKLIYLDMRGCTKLESFPTH 647

Query: 610 --------------------------IVRSM------KDLSELFLDGTSIKE-VPSSIEL 636
                                     +VR M       DL  L + G  + E +   ++ 
Sbjct: 648 LNLESLEYLENCIWNKNLPGLDYLACLVRCMPCEFRPNDLVRLIVRGNQMLEKLWEGVQS 707

Query: 637 LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
           L  L  +++S+C NL  +P  +    +L  L LS C  L  VP T+G ++ L  L+    
Sbjct: 708 LASLVEMDMSECGNLTEIPD-LSKATNLVNLYLSNCKSLVTVPSTIGNLQKLVRLE---- 762

Query: 697 AVPHSTSWYSYIPINLMRKSVALK-LPSLSGLCSLRKLNLTDCN-LMEGALPSDIGNLCS 754
                           M++   L+ LP+   L SL+ L+L+ C+ L    L S      S
Sbjct: 763 ----------------MKECTGLEVLPTDVNLSSLKMLDLSGCSSLRTFPLISK-----S 801

Query: 755 LKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRV 804
           +K LYL   +   +P  I + S L  + +  CKRL++   + PNI ++ +
Sbjct: 802 IKWLYLENTAIEEVPCCIENFSWLTVLMMYCCKRLKN---ISPNIFRLTI 848


>gi|7268442|emb|CAB80962.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 1072

 Score =  285 bits (730), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 221/700 (31%), Positives = 344/700 (49%), Gaps = 87/700 (12%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQ 75
           S + RM+GI G  G+GK+TI + +Y  +  +F    F+ +V  + S+   + L + +L +
Sbjct: 202 SKEARMVGIWGPSGIGKSTIGKALYSQLFCQFHFHAFVPHVYSMKSEWEEIFLSK-ILGK 260

Query: 76  LLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIIT 135
            +K+           + ++   L +KKVL+V+DDV D + L++L G  +WFG GSRII+ 
Sbjct: 261 DIKIGGK--------LGVVEQMLNQKKVLIVLDDVDDPEFLKTLVGETKWFGPGSRIIVI 312

Query: 136 SRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPL 195
           ++D  LLK H +D +Y+    + D AL++    AF    P  +   L+  +   AG LPL
Sbjct: 313 TQDMQLLKAHDIDLLYEVKFPSLDLALKMLCRSAFGENSPPDDFKALAFEVAVLAGNLPL 372

Query: 196 ALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKG 255
            L VLGS L  R+ +EW   + R       +I+  L++S+D L + ++ +FL IAC F G
Sbjct: 373 GLSVLGSSLKRRTKEEWMEMMPRFRNGLNGDIMKTLRVSYDRLHQKDQDMFLYIACLFNG 432

Query: 256 NDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPEEL 314
            +  YV + LE       +G+ +L+EK LI +  +  + MH+LL++LG +I + +S    
Sbjct: 433 FEVSYVNDLLEDN-----VGVTMLVEKSLIRITPDGDIEMHNLLEKLGIEIDRAKS---- 483

Query: 315 GKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKIC 374
                                 E V GI         E+ L    K+F  M NL+ L + 
Sbjct: 484 ---------------------KETVLGIRFCTAFRSKEL-LPIDEKSFQGMRNLQCLSVT 521

Query: 375 N--LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLD 432
              + LP  L YL  +LRLL W   PLK LP + + D  I++ M  S++ +LW+G   L 
Sbjct: 522 GDYMDLPQSLVYLPPKLRLLDWDRCPLKCLPYSFKADYLIQLTMMGSKLEKLWEGTVPLG 581

Query: 433 KLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSL 492
            LK M +  S  L  + D + A NLE+L L  C  L  +  S+    KLI L+M+ CT L
Sbjct: 582 SLKRMNMHGSRYLREISDLSNARNLEELNLSECRSLVTLSSSIQNAIKLIYLDMRGCTKL 641

Query: 493 ITLPGKILMKSLEKL-------NLKSLPTTISGLKC---------LSTLDVSGDLKFREF 536
            + P  + ++SLE L       NL  L      ++C         L  L V G+    + 
Sbjct: 642 ESFPTHLNLESLEYLENCIWNKNLPGLDYLACLVRCMPCEFRPNDLVRLIVRGNQMLEKL 701

Query: 537 PEIVEHMEHLSELHLEG------------------------TAIRGLPLSIELLSGLVLL 572
            E V+ +  L E+ +                           ++  +P +I  L  LV L
Sbjct: 702 WEGVQSLASLVEMDMSECGNLTEIPDLSKATNLVNLYLSNCKSLVTVPSTIGNLQKLVRL 761

Query: 573 NLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPS 632
            +K C  LE+LP  V NL  L+ L LSGCS L+ FP I +S+K    L+L+ T+I+EVP 
Sbjct: 762 EMKECTGLEVLPTDV-NLSSLKMLDLSGCSSLRTFPLISKSIK---WLYLENTAIEEVPC 817

Query: 633 SIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC 672
            IE  + L +L +  CK L  +  +I  L  LK ++ + C
Sbjct: 818 CIENFSWLTVLMMYCCKRLKNISPNIFRLTILKLVDFTEC 857



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 147/294 (50%), Gaps = 29/294 (9%)

Query: 541 EHMEHLSELHLEGTAIRGLPLS-IELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS 599
           + M +L  L + G  +  LP S + L   L LL+   C  L+ LP +      L  L + 
Sbjct: 510 QGMRNLQCLSVTGDYM-DLPQSLVYLPPKLRLLDWDRC-PLKCLPYSF-KADYLIQLTMM 566

Query: 600 GCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSII 659
           G SKL+K  E    +  L  + + G+      S +     LE LNLS+C++LV L SSI 
Sbjct: 567 G-SKLEKLWEGTVPLGSLKRMNMHGSRYLREISDLSNARNLEELNLSECRSLVTLSSSIQ 625

Query: 660 ALKSLKTLNLSGCFKLENVPETLGQIESLEELD--ISGTAVPHSTSWY--------SYIP 709
               L  L++ GC KLE+ P  L  +ESLE L+  I    +P               + P
Sbjct: 626 NAIKLIYLDMRGCTKLESFPTHL-NLESLEYLENCIWNKNLPGLDYLACLVRCMPCEFRP 684

Query: 710 INLMR-----KSVALKL-PSLSGLCSLRKLNLTDC-NLMEGALPSDIGNLCSLKELYLSK 762
            +L+R       +  KL   +  L SL ++++++C NL E  +P D+    +L  LYLS 
Sbjct: 685 NDLVRLIVRGNQMLEKLWEGVQSLASLVEMDMSECGNLTE--IP-DLSKATNLVNLYLSN 741

Query: 763 -NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP--PNIRQVRVNGCASLVTL 813
             S V++P++I +L KL+ +E+++C  L+ LP      +++ + ++GC+SL T 
Sbjct: 742 CKSLVTVPSTIGNLQKLVRLEMKECTGLEVLPTDVNLSSLKMLDLSGCSSLRTF 795



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 146/350 (41%), Gaps = 67/350 (19%)

Query: 491 SLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELH 550
           SL+ LP K+ +   ++  LK LP +      L  L + G  K  +  E    +  L  ++
Sbjct: 530 SLVYLPPKLRLLDWDRCPLKCLPYSFKA-DYLIQLTMMGS-KLEKLWEGTVPLGSLKRMN 587

Query: 551 LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPE- 609
           + G+        +     L  LNL  CRSL  L  ++ N   L  L + GC+KL+ FP  
Sbjct: 588 MHGSRYLREISDLSNARNLEELNLSECRSLVTLSSSIQNAIKLIYLDMRGCTKLESFPTH 647

Query: 610 --------------------------IVRSM------KDLSELFLDGTSIKE-VPSSIEL 636
                                     +VR M       DL  L + G  + E +   ++ 
Sbjct: 648 LNLESLEYLENCIWNKNLPGLDYLACLVRCMPCEFRPNDLVRLIVRGNQMLEKLWEGVQS 707

Query: 637 LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
           L  L  +++S+C NL  +P  +    +L  L LS C  L  VP T+G ++ L  L+    
Sbjct: 708 LASLVEMDMSECGNLTEIPD-LSKATNLVNLYLSNCKSLVTVPSTIGNLQKLVRLE---- 762

Query: 697 AVPHSTSWYSYIPINLMRKSVALK-LPSLSGLCSLRKLNLTDCN-LMEGALPSDIGNLCS 754
                           M++   L+ LP+   L SL+ L+L+ C+ L    L S      S
Sbjct: 763 ----------------MKECTGLEVLPTDVNLSSLKMLDLSGCSSLRTFPLISK-----S 801

Query: 755 LKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRV 804
           +K LYL   +   +P  I + S L  + +  CKRL++   + PNI ++ +
Sbjct: 802 IKWLYLENTAIEEVPCCIENFSWLTVLMMYCCKRLKN---ISPNIFRLTI 848


>gi|10177589|dbj|BAB10820.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1298

 Score =  285 bits (730), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 238/716 (33%), Positives = 351/716 (49%), Gaps = 66/716 (9%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV-----REISSKGG------ 64
           + +VRM+GI G  G+GKTTIAR +++ +S  F  S F+D       RE + KG       
Sbjct: 239 AEEVRMVGIWGSSGIGKTTIARALFNQLSRHFPVSKFIDRAFVYKSRE-TYKGANPDDPN 297

Query: 65  -LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNR 123
             + LQ   LS++L   D  I    D +  LG RL+ +K L++IDD+ D+  L SL G  
Sbjct: 298 MKLHLQGCFLSEILGKKDIKI----DHLGALGERLKHQKTLIIIDDLDDLVVLDSLVGKT 353

Query: 124 EWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLS 183
            WFG GSRII+ + ++  L+ HG+D +Y+    + + A ++F   AF    P +   +L 
Sbjct: 354 NWFGCGSRIIVITNNKQFLRAHGIDHIYEVSLPSKERAQEMFCQSAFGENSPPEGFEELV 413

Query: 184 ARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQEL-E 242
             I   AG LPL L V GS L GR  + W   L RL+ +    I + L++S+D +  + +
Sbjct: 414 VEIAWLAGSLPLGLTVFGSALRGRKKEYWVKMLPRLQNDLDGNIEETLKVSYDAIGNVKD 473

Query: 243 KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELG 302
           + +F  IAC F       +   L   G    I +  L++K LI V N+ + MH LLQE G
Sbjct: 474 QALFRLIACLFNHVKVRDIELLLADSGLDVNIALENLVDKSLIHVRNDHVEMHRLLQETG 533

Query: 303 QQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAF 362
           + IV+ QS +  G+R  L    +   VL+E  GT  V GI LD          C    AF
Sbjct: 534 RNIVRSQSTDNPGEREFLVDSNDSRTVLSEGIGTRKVLGISLDTSKVSE---FCVHENAF 590

Query: 363 SKMTNLRLLKICN---------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
             M NL  L I +         + LP  + Y S + + L W  +PLK +P    +   ++
Sbjct: 591 KGMGNLLFLDISSKTFIEEEVKVHLPEKINYYSVQPKQLIWDRFPLKCMPYTF-LRNLVK 649

Query: 414 IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
           + M  S++ +LW+G      LK + +  S+ L  +PD + A N+EKL    C  L E+  
Sbjct: 650 LEMHDSKLEKLWEGAMSFTCLKELDMWASKYLKEIPDLSKATNIEKLDFGHCWSLVELPS 709

Query: 474 SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLP---TTISGLKCLST 524
           S+   NKL+ LNM+ C  L TLP    +KSL+ LN      L++ P   T IS L    T
Sbjct: 710 SIRNLNKLLELNMEYCGELETLPTGFNLKSLDYLNFNECWKLRTFPEFATNISNLILAET 769

Query: 525 L--DVSGDLKFREFPEIVEHMEHLSELHLEGTA--------------IRGLPLSIEL--- 565
              +   +L F+   E+        E   +G                +  +P  +EL   
Sbjct: 770 SIEEYPSNLYFKNVRELSMGKADSDENKCQGVKPFMPMLSPTLTLLELWNIPNLVELSSS 829

Query: 566 ---LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL 622
              L+ L  L++  CR+LE LP  + NL+ L SL L GCS+LK+FP+I  ++K L    L
Sbjct: 830 FQNLNNLERLDICYCRNLESLPTGI-NLESLVSLNLFGCSRLKRFPDISTNIKYLD---L 885

Query: 623 DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
           D T I+EVP  IE    L  L +  C+ L  +  +I  LK L  ++ S C  L  V
Sbjct: 886 DQTGIEEVPWQIENFFNLTKLTMKGCRELKCVSLNIFKLKHLGEVSFSNCGALTRV 941



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 165/400 (41%), Gaps = 85/400 (21%)

Query: 519  LKCLSTLDVSGDLKFREFPEI--VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
              CL  LD+      +E P++    ++E L   H    ++  LP SI  L+ L+ LN++ 
Sbjct: 667  FTCLKELDMWASKYLKEIPDLSKATNIEKLDFGHC--WSLVELPSSIRNLNKLLELNMEY 724

Query: 577  CRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIE- 635
            C  LE LP T  NLK L  L  + C KL+ FPE      ++S L L  TSI+E PS++  
Sbjct: 725  CGELETLP-TGFNLKSLDYLNFNECWKLRTFPEFA---TNISNLILAETSIEEYPSNLYF 780

Query: 636  ---------------------------LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
                                       L   L LL L +  NLV L SS   L +L+ L+
Sbjct: 781  KNVRELSMGKADSDENKCQGVKPFMPMLSPTLTLLELWNIPNLVELSSSFQNLNNLERLD 840

Query: 669  LSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLC 728
            +  C  LE++P  +  +ESL                   + +NL   S   + P +S   
Sbjct: 841  ICYCRNLESLPTGI-NLESL-------------------VSLNLFGCSRLKRFPDIS--T 878

Query: 729  SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELEDCK 787
            +++ L+L    + E  +P  I N  +L +L +        +  +I  L  L  +   +C 
Sbjct: 879  NIKYLDLDQTGIEE--VPWQIENFFNLTKLTMKGCRELKCVSLNIFKLKHLGEVSFSNCG 936

Query: 788  RLQ--SLPQLPPNIRQVRVNGCASLVTLLDALKL---CKSDSTMIAC--LDSLKLLGNKS 840
             L    L   P  +  ++ +  A +V+      L   C  +   + C  LD   +L  +S
Sbjct: 937  ALTRVDLSCYPSGVEMMKADN-ADIVSEETTSSLPDSCVLNVNFMDCVNLDREPVLHQQS 995

Query: 841  LAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGS 880
            + F+                S+++PG E+P +F Y+   S
Sbjct: 996  IIFN----------------SMILPGEEVPSYFTYRTSDS 1019



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 43/255 (16%)

Query: 580 LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLT 638
           L+ +P T   L+ L  L++   SKL+K  E   S   L EL +  +  +KE+P  +   T
Sbjct: 636 LKCMPYTF--LRNLVKLEMHD-SKLEKLWEGAMSFTCLKELDMWASKYLKEIPD-LSKAT 691

Query: 639 KLELLNLSDCKNLVRLPSSI-----------------------IALKSLKTLNLSGCFKL 675
            +E L+   C +LV LPSSI                         LKSL  LN + C+KL
Sbjct: 692 NIEKLDFGHCWSLVELPSSIRNLNKLLELNMEYCGELETLPTGFNLKSLDYLNFNECWKL 751

Query: 676 ENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMR--------KSVALKLPSLSGL 727
              PE    I +L   + S    P +  + +   +++ +        + V   +P LS  
Sbjct: 752 RTFPEFATNISNLILAETSIEEYPSNLYFKNVRELSMGKADSDENKCQGVKPFMPMLSPT 811

Query: 728 CSLRKL-NLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELED 785
            +L +L N+   NL+E  L S   NL +L+ L +    +  SLPT I +L  L+++ L  
Sbjct: 812 LTLLELWNIP--NLVE--LSSSFQNLNNLERLDICYCRNLESLPTGI-NLESLVSLNLFG 866

Query: 786 CKRLQSLPQLPPNIR 800
           C RL+  P +  NI+
Sbjct: 867 CSRLKRFPDISTNIK 881


>gi|15237452|ref|NP_199463.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177588|dbj|BAB10819.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332008010|gb|AED95393.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1353

 Score =  285 bits (729), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 238/716 (33%), Positives = 351/716 (49%), Gaps = 66/716 (9%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV-----REISSKGG------ 64
           + +VRM+GI G  G+GKTTIAR +++ +S  F  S F+D       RE + KG       
Sbjct: 200 AEEVRMVGIWGSSGIGKTTIARALFNQLSRHFPVSKFIDRAFVYKSRE-TYKGANPDDPN 258

Query: 65  -LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNR 123
             + LQ   LS++L   D  I    D +  LG RL+ +K L++IDD+ D+  L SL G  
Sbjct: 259 MKLHLQGCFLSEILGKKDIKI----DHLGALGERLKHQKTLIIIDDLDDLVVLDSLVGKT 314

Query: 124 EWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLS 183
            WFG GSRII+ + ++  L+ HG+D +Y+    + + A ++F   AF    P +   +L 
Sbjct: 315 NWFGCGSRIIVITNNKQFLRAHGIDHIYEVSLPSKERAQEMFCQSAFGENSPPEGFEELV 374

Query: 184 ARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQEL-E 242
             I   AG LPL L V GS L GR  + W   L RL+ +    I + L++S+D +  + +
Sbjct: 375 VEIAWLAGSLPLGLTVFGSALRGRKKEYWVKMLPRLQNDLDGNIEETLKVSYDAIGNVKD 434

Query: 243 KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELG 302
           + +F  IAC F       +   L   G    I +  L++K LI V N+ + MH LLQE G
Sbjct: 435 QALFRLIACLFNHVKVRDIELLLADSGLDVNIALENLVDKSLIHVRNDHVEMHRLLQETG 494

Query: 303 QQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAF 362
           + IV+ QS +  G+R  L    +   VL+E  GT  V GI LD          C    AF
Sbjct: 495 RNIVRSQSTDNPGEREFLVDSNDSRTVLSEGIGTRKVLGISLDTSKVSE---FCVHENAF 551

Query: 363 SKMTNLRLLKICN---------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
             M NL  L I +         + LP  + Y S + + L W  +PLK +P    +   ++
Sbjct: 552 KGMGNLLFLDISSKTFIEEEVKVHLPEKINYYSVQPKQLIWDRFPLKCMPYTF-LRNLVK 610

Query: 414 IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
           + M  S++ +LW+G      LK + +  S+ L  +PD + A N+EKL    C  L E+  
Sbjct: 611 LEMHDSKLEKLWEGAMSFTCLKELDMWASKYLKEIPDLSKATNIEKLDFGHCWSLVELPS 670

Query: 474 SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLP---TTISGLKCLST 524
           S+   NKL+ LNM+ C  L TLP    +KSL+ LN      L++ P   T IS L    T
Sbjct: 671 SIRNLNKLLELNMEYCGELETLPTGFNLKSLDYLNFNECWKLRTFPEFATNISNLILAET 730

Query: 525 L--DVSGDLKFREFPEIVEHMEHLSELHLEGTA--------------IRGLPLSIEL--- 565
              +   +L F+   E+        E   +G                +  +P  +EL   
Sbjct: 731 SIEEYPSNLYFKNVRELSMGKADSDENKCQGVKPFMPMLSPTLTLLELWNIPNLVELSSS 790

Query: 566 ---LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL 622
              L+ L  L++  CR+LE LP  + NL+ L SL L GCS+LK+FP+I  ++K L    L
Sbjct: 791 FQNLNNLERLDICYCRNLESLPTGI-NLESLVSLNLFGCSRLKRFPDISTNIKYLD---L 846

Query: 623 DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
           D T I+EVP  IE    L  L +  C+ L  +  +I  LK L  ++ S C  L  V
Sbjct: 847 DQTGIEEVPWQIENFFNLTKLTMKGCRELKCVSLNIFKLKHLGEVSFSNCGALTRV 902



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 165/400 (41%), Gaps = 85/400 (21%)

Query: 519 LKCLSTLDVSGDLKFREFPEI--VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
             CL  LD+      +E P++    ++E L   H    ++  LP SI  L+ L+ LN++ 
Sbjct: 628 FTCLKELDMWASKYLKEIPDLSKATNIEKLDFGHC--WSLVELPSSIRNLNKLLELNMEY 685

Query: 577 CRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIE- 635
           C  LE LP T  NLK L  L  + C KL+ FPE      ++S L L  TSI+E PS++  
Sbjct: 686 CGELETLP-TGFNLKSLDYLNFNECWKLRTFPEFA---TNISNLILAETSIEEYPSNLYF 741

Query: 636 ---------------------------LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
                                      L   L LL L +  NLV L SS   L +L+ L+
Sbjct: 742 KNVRELSMGKADSDENKCQGVKPFMPMLSPTLTLLELWNIPNLVELSSSFQNLNNLERLD 801

Query: 669 LSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLC 728
           +  C  LE++P  +  +ESL                   + +NL   S   + P +S   
Sbjct: 802 ICYCRNLESLPTGI-NLESL-------------------VSLNLFGCSRLKRFPDIS--T 839

Query: 729 SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELEDCK 787
           +++ L+L    + E  +P  I N  +L +L +        +  +I  L  L  +   +C 
Sbjct: 840 NIKYLDLDQTGIEE--VPWQIENFFNLTKLTMKGCRELKCVSLNIFKLKHLGEVSFSNCG 897

Query: 788 RLQ--SLPQLPPNIRQVRVNGCASLVTLLDALKL---CKSDSTMIAC--LDSLKLLGNKS 840
            L    L   P  +  ++ +  A +V+      L   C  +   + C  LD   +L  +S
Sbjct: 898 ALTRVDLSCYPSGVEMMKADN-ADIVSEETTSSLPDSCVLNVNFMDCVNLDREPVLHQQS 956

Query: 841 LAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGS 880
           + F+                S+++PG E+P +F Y+   S
Sbjct: 957 IIFN----------------SMILPGEEVPSYFTYRTSDS 980



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 43/255 (16%)

Query: 580 LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLT 638
           L+ +P T   L+ L  L++   SKL+K  E   S   L EL +  +  +KE+P  +   T
Sbjct: 597 LKCMPYTF--LRNLVKLEMHD-SKLEKLWEGAMSFTCLKELDMWASKYLKEIPD-LSKAT 652

Query: 639 KLELLNLSDCKNLVRLPSSI-----------------------IALKSLKTLNLSGCFKL 675
            +E L+   C +LV LPSSI                         LKSL  LN + C+KL
Sbjct: 653 NIEKLDFGHCWSLVELPSSIRNLNKLLELNMEYCGELETLPTGFNLKSLDYLNFNECWKL 712

Query: 676 ENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMR--------KSVALKLPSLSGL 727
              PE    I +L   + S    P +  + +   +++ +        + V   +P LS  
Sbjct: 713 RTFPEFATNISNLILAETSIEEYPSNLYFKNVRELSMGKADSDENKCQGVKPFMPMLSPT 772

Query: 728 CSLRKL-NLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELED 785
            +L +L N+   NL+E  L S   NL +L+ L +    +  SLPT I +L  L+++ L  
Sbjct: 773 LTLLELWNIP--NLVE--LSSSFQNLNNLERLDICYCRNLESLPTGI-NLESLVSLNLFG 827

Query: 786 CKRLQSLPQLPPNIR 800
           C RL+  P +  NI+
Sbjct: 828 CSRLKRFPDISTNIK 842


>gi|145358924|ref|NP_199464.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332008011|gb|AED95394.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1168

 Score =  285 bits (729), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 238/716 (33%), Positives = 351/716 (49%), Gaps = 66/716 (9%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV-----REISSKGG------ 64
           + +VRM+GI G  G+GKTTIAR +++ +S  F  S F+D       RE + KG       
Sbjct: 201 AEEVRMVGIWGSSGIGKTTIARALFNQLSRHFPVSKFIDRAFVYKSRE-TYKGANPDDPN 259

Query: 65  -LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNR 123
             + LQ   LS++L   D  I    D +  LG RL+ +K L++IDD+ D+  L SL G  
Sbjct: 260 MKLHLQGCFLSEILGKKDIKI----DHLGALGERLKHQKTLIIIDDLDDLVVLDSLVGKT 315

Query: 124 EWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLS 183
            WFG GSRII+ + ++  L+ HG+D +Y+    + + A ++F   AF    P +   +L 
Sbjct: 316 NWFGCGSRIIVITNNKQFLRAHGIDHIYEVSLPSKERAQEMFCQSAFGENSPPEGFEELV 375

Query: 184 ARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQEL-E 242
             I   AG LPL L V GS L GR  + W   L RL+ +    I + L++S+D +  + +
Sbjct: 376 VEIAWLAGSLPLGLTVFGSALRGRKKEYWVKMLPRLQNDLDGNIEETLKVSYDAIGNVKD 435

Query: 243 KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELG 302
           + +F  IAC F       +   L   G    I +  L++K LI V N+ + MH LLQE G
Sbjct: 436 QALFRLIACLFNHVKVRDIELLLADSGLDVNIALENLVDKSLIHVRNDHVEMHRLLQETG 495

Query: 303 QQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAF 362
           + IV+ QS +  G+R  L    +   VL+E  GT  V GI LD          C    AF
Sbjct: 496 RNIVRSQSTDNPGEREFLVDSNDSRTVLSEGIGTRKVLGISLDTSKVSE---FCVHENAF 552

Query: 363 SKMTNLRLLKICN---------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
             M NL  L I +         + LP  + Y S + + L W  +PLK +P    +   ++
Sbjct: 553 KGMGNLLFLDISSKTFIEEEVKVHLPEKINYYSVQPKQLIWDRFPLKCMPYTF-LRNLVK 611

Query: 414 IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
           + M  S++ +LW+G      LK + +  S+ L  +PD + A N+EKL    C  L E+  
Sbjct: 612 LEMHDSKLEKLWEGAMSFTCLKELDMWASKYLKEIPDLSKATNIEKLDFGHCWSLVELPS 671

Query: 474 SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLP---TTISGLKCLST 524
           S+   NKL+ LNM+ C  L TLP    +KSL+ LN      L++ P   T IS L    T
Sbjct: 672 SIRNLNKLLELNMEYCGELETLPTGFNLKSLDYLNFNECWKLRTFPEFATNISNLILAET 731

Query: 525 L--DVSGDLKFREFPEIVEHMEHLSELHLEGTA--------------IRGLPLSIEL--- 565
              +   +L F+   E+        E   +G                +  +P  +EL   
Sbjct: 732 SIEEYPSNLYFKNVRELSMGKADSDENKCQGVKPFMPMLSPTLTLLELWNIPNLVELSSS 791

Query: 566 ---LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL 622
              L+ L  L++  CR+LE LP  + NL+ L SL L GCS+LK+FP+I  ++K L    L
Sbjct: 792 FQNLNNLERLDICYCRNLESLPTGI-NLESLVSLNLFGCSRLKRFPDISTNIKYLD---L 847

Query: 623 DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
           D T I+EVP  IE    L  L +  C+ L  +  +I  LK L  ++ S C  L  V
Sbjct: 848 DQTGIEEVPWQIENFFNLTKLTMKGCRELKCVSLNIFKLKHLGEVSFSNCGALTRV 903



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 165/400 (41%), Gaps = 85/400 (21%)

Query: 519 LKCLSTLDVSGDLKFREFPEI--VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
             CL  LD+      +E P++    ++E L   H    ++  LP SI  L+ L+ LN++ 
Sbjct: 629 FTCLKELDMWASKYLKEIPDLSKATNIEKLDFGHC--WSLVELPSSIRNLNKLLELNMEY 686

Query: 577 CRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIE- 635
           C  LE LP T  NLK L  L  + C KL+ FPE      ++S L L  TSI+E PS++  
Sbjct: 687 CGELETLP-TGFNLKSLDYLNFNECWKLRTFPEFA---TNISNLILAETSIEEYPSNLYF 742

Query: 636 ---------------------------LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
                                      L   L LL L +  NLV L SS   L +L+ L+
Sbjct: 743 KNVRELSMGKADSDENKCQGVKPFMPMLSPTLTLLELWNIPNLVELSSSFQNLNNLERLD 802

Query: 669 LSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLC 728
           +  C  LE++P  +  +ESL                   + +NL   S   + P +S   
Sbjct: 803 ICYCRNLESLPTGI-NLESL-------------------VSLNLFGCSRLKRFPDIS--T 840

Query: 729 SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELEDCK 787
           +++ L+L    + E  +P  I N  +L +L +        +  +I  L  L  +   +C 
Sbjct: 841 NIKYLDLDQTGIEE--VPWQIENFFNLTKLTMKGCRELKCVSLNIFKLKHLGEVSFSNCG 898

Query: 788 RLQ--SLPQLPPNIRQVRVNGCASLVTLLDALKL---CKSDSTMIAC--LDSLKLLGNKS 840
            L    L   P  +  ++ +  A +V+      L   C  +   + C  LD   +L  +S
Sbjct: 899 ALTRVDLSCYPSGVEMMKADN-ADIVSEETTSSLPDSCVLNVNFMDCVNLDREPVLHQQS 957

Query: 841 LAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGS 880
           + F+                S+++PG E+P +F Y+   S
Sbjct: 958 IIFN----------------SMILPGEEVPSYFTYRTSDS 981



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 43/255 (16%)

Query: 580 LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLT 638
           L+ +P T   L+ L  L++   SKL+K  E   S   L EL +  +  +KE+P  +   T
Sbjct: 598 LKCMPYTF--LRNLVKLEMHD-SKLEKLWEGAMSFTCLKELDMWASKYLKEIPD-LSKAT 653

Query: 639 KLELLNLSDCKNLVRLPSSI-----------------------IALKSLKTLNLSGCFKL 675
            +E L+   C +LV LPSSI                         LKSL  LN + C+KL
Sbjct: 654 NIEKLDFGHCWSLVELPSSIRNLNKLLELNMEYCGELETLPTGFNLKSLDYLNFNECWKL 713

Query: 676 ENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMR--------KSVALKLPSLSGL 727
              PE    I +L   + S    P +  + +   +++ +        + V   +P LS  
Sbjct: 714 RTFPEFATNISNLILAETSIEEYPSNLYFKNVRELSMGKADSDENKCQGVKPFMPMLSPT 773

Query: 728 CSLRKL-NLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELED 785
            +L +L N+   NL+E  L S   NL +L+ L +    +  SLPT I +L  L+++ L  
Sbjct: 774 LTLLELWNIP--NLVE--LSSSFQNLNNLERLDICYCRNLESLPTGI-NLESLVSLNLFG 828

Query: 786 CKRLQSLPQLPPNIR 800
           C RL+  P +  NI+
Sbjct: 829 CSRLKRFPDISTNIK 843


>gi|227438293|gb|ACP30636.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1770

 Score =  285 bits (729), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 224/710 (31%), Positives = 355/710 (50%), Gaps = 64/710 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMI-GICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           +++  +K++ L+ S      MI GICG  G+GKTTIAR ++  +S  F+ + F++N+R  
Sbjct: 190 IEAHLDKMQSLLHSDEEGGAMIVGICGPSGIGKTTIARALHSRLSSGFQLTCFMENLRGS 249

Query: 60  SSKGGL------VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDV 113
            + GGL      + LQ  LLS++       I++    +  +  RL  +KVL+++DDV D+
Sbjct: 250 CNSGGLDEYGLKLRLQELLLSKIFNQNGMRIYH----LGAIPERLCDQKVLIILDDVDDL 305

Query: 114 KQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY 173
           +QL++LA    WFG GSRII+T+ D+ LL+ HG+  +Y        EA ++F   AF+  
Sbjct: 306 QQLEALADETNWFGDGSRIIVTTEDQELLELHGITNIYHVDLPTEKEARKIFCRYAFRQS 365

Query: 174 QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
            P      L+ R     G LP  L V+GS L G+  D+W S L RLE     +I  +L++
Sbjct: 366 LPPYGYENLAERATELCGNLPFGLRVMGSMLRGKKEDDWESILCRLENSNIPKIEAVLRV 425

Query: 234 SFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTL 292
            +D L E ++ +F  IA FF   +  +V   L   G    +G++ L  K LI + +   +
Sbjct: 426 GYDSLHEKDQILFHLIAVFFNYENDGHVKTMLADSGLDVRLGLKTLAYKSLIKISSEGEV 485

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            MH LLQ++G+Q +QRQ P    KR  L   +++  VL   +G+  + GI  D    +++
Sbjct: 486 VMHKLLQQVGRQAIQRQEP---WKRQILIDTDDIRDVLENDSGSRSLMGISFDMSTIKDD 542

Query: 353 VYLCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
           + +  SA+ F  M  LR L++ N        + LP  +E+   RL+LL W  YP K LP 
Sbjct: 543 MDI--SARVFKSMRTLRFLRVYNTRCDTNVRVHLPEDMEF-PPRLKLLHWEVYPRKCLPR 599

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
               +  +E+++  +++ +LW+G + L  LK M+L     L  +PD   A NLE L + G
Sbjct: 600 TFCPEHLVELHLTDTQLEQLWEGTQPLTSLKKMVLVSCLCLKELPDLANATNLEILDVCG 659

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLP---TT 515
           C  L EIH S+   ++L  L+M  C  L  +P    + SLE L       ++ LP   TT
Sbjct: 660 CQSLVEIHSSVGNLHRLQSLDMIFCKKLQVVPTLFNLTSLESLVIMGSYQMRELPDISTT 719

Query: 516 ISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLK 575
           I  L    T+         EF E      HL  L + G AI    ++    S   L+ ++
Sbjct: 720 IRELSIPETM-------LEEFLESTRLWSHLQCLEIFGCAITHQFMAHP--SQRNLMVMR 770

Query: 576 NCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIE 635
           +   +E +P  +  L  L+ L + GC KL   PE+ RS+  L        ++ + P S+E
Sbjct: 771 SVTGIERIPDCIKCLHGLKELSIYGCPKLASLPELPRSLTTL--------TVYKCP-SLE 821

Query: 636 LL------TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVP 679
            L      +++E L+  DC  L R    +I  +S +      C    NVP
Sbjct: 822 TLEPFPFGSRIEDLSFLDCFRLGRKARRLITQQSSRV-----CLPGRNVP 866



 Score =  239 bits (610), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 188/562 (33%), Positives = 280/562 (49%), Gaps = 63/562 (11%)

Query: 1    MDSRCEKLRFLM---DSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVR 57
            +++  EK++ L+   D G +    +GICG  G+GKTTIAR ++  +S  F+ S F++N+R
Sbjct: 1110 IEAHLEKMQSLLHLDDEGGA--MFVGICGPAGIGKTTIARALHSRLSSGFQHSCFMENLR 1167

Query: 58   EISSKGGL------VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVV 111
                  GL      + LQ  LLS++       I++    +  +  RL  +KVL+++DDV 
Sbjct: 1168 GSCCNSGLDEYGLKLRLQELLLSKIFNQNGMRIYH----LGAIPERLCDQKVLIILDDVD 1223

Query: 112  DVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFK 171
            D+KQL++LA   +WFG GSR+I+                     L  D A Q+F   AF+
Sbjct: 1224 DLKQLEALADETKWFGDGSRVILM--------------------LELD-ARQIFCRIAFR 1262

Query: 172  TYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDIL 231
                     +L  R++     LPL L V+GS L  + VD+W + L+RLE     +I  +L
Sbjct: 1263 QLSAPHGFEKLVERVVNLCSNLPLGLRVMGSSLRRKKVDDWEAILQRLENSLNRDIEGVL 1322

Query: 232  QISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NN 290
            ++ +D L + ++ +F  IACFF   D D V   L        +G++ L  K LI +    
Sbjct: 1323 RVGYDNLHKDDQFLFQLIACFFNYQDDDRVKAMLVDSNLDVRLGLKTLSYKSLIQISAEG 1382

Query: 291  TLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHE 350
            T+ MH LLQ++G++ V  Q P    KR  L    ++C VL     +  V GI  D     
Sbjct: 1383 TIVMHKLLQQVGREAVHLQEPR---KRQILIDAHQICDVLENDYDSASVMGISFDTSTIP 1439

Query: 351  NEVYLCASAKAFSKMTNLRLLKI--------CNLQLPNGLEYLSNRLRLLGWRGYPLKFL 402
            N V  C SA+AF  M +LR L I          + LP  + +    LRLL W  YP K L
Sbjct: 1440 NGV--CISAQAFRTMRDLRFLSIYETRRDPNVRMHLPEDMSF-PPLLRLLHWEVYPGKCL 1496

Query: 403  PSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL 462
            P  L+ +  +E+    S++ +LW+GI+ L  LK M LS S +L  +PD + A +L++L L
Sbjct: 1497 PHTLRPEHLVELCFVNSKLEQLWQGIQPLTNLKKMDLSGSLSLKEVPDLSNATHLKRLNL 1556

Query: 463  EGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL------NLKSLPTTI 516
             GC  L EI  S+   +KL  L +  C SL   P  + + SLE L       L+ +P   
Sbjct: 1557 TGCWSLVEIPSSIGDLHKLEELEINLCISLQVFPSHLNLASLETLEMVGCWQLRKIPYVS 1616

Query: 517  SGLKCLSTLDVSGDLKFREFPE 538
            +  K L    V GD    EFPE
Sbjct: 1617 T--KSL----VIGDTMLEEFPE 1632



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 8/132 (6%)

Query: 509  LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGT-AIRGLPLSIELLS 567
            L+ L   I  L  L  +D+SG L  +E P++  +  HL  L+L G  ++  +P SI  L 
Sbjct: 1515 LEQLWQGIQPLTNLKKMDLSGSLSLKEVPDL-SNATHLKRLNLTGCWSLVEIPSSIGDLH 1573

Query: 568  GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSI 627
             L  L +  C SL++ P  + NL  L +L++ GC +L+K P +         L +  T +
Sbjct: 1574 KLEELEINLCISLQVFPSHL-NLASLETLEMVGCWQLRKIPYV-----STKSLVIGDTML 1627

Query: 628  KEVPSSIELLTK 639
            +E P S+ L  K
Sbjct: 1628 EEFPESLCLEAK 1639



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 25/136 (18%)

Query: 544  EHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            EHL EL    + +  L   I+ L+ L  ++L    SL+ +P  +SN   L+ L L+GC  
Sbjct: 1503 EHLVELCFVNSKLEQLWQGIQPLTNLKKMDLSGSLSLKEVP-DLSNATHLKRLNLTGCWS 1561

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
            L                        E+PSSI  L KLE L ++ C +L   PS  + L S
Sbjct: 1562 L-----------------------VEIPSSIGDLHKLEELEINLCISLQVFPSH-LNLAS 1597

Query: 664  LKTLNLSGCFKLENVP 679
            L+TL + GC++L  +P
Sbjct: 1598 LETLEMVGCWQLRKIP 1613



 Score = 48.1 bits (113), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 602  SKLKKFPEIVRSMKDLSELFLDGT-SIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
            SKL++  + ++ + +L ++ L G+ S+KEVP  +   T L+ LNL+ C +LV +PSSI  
Sbjct: 1513 SKLEQLWQGIQPLTNLKKMDLSGSLSLKEVPD-LSNATHLKRLNLTGCWSLVEIPSSIGD 1571

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDISG 695
            L  L+ L ++ C  L+  P  L  + SLE L++ G
Sbjct: 1572 LHKLEELEINLCISLQVFPSHLN-LASLETLEMVG 1605



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 25/140 (17%)

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
           S+  L  L  L++  C+ L+++P T+ NL  L SL + G  ++++ P+I  ++++LS   
Sbjct: 669 SVGNLHRLQSLDMIFCKKLQVVP-TLFNLTSLESLVIMGSYQMRELPDISTTIRELS--- 724

Query: 622 LDGTSIKEVPSSIELLTKLELLNLSDC------------KNLV---------RLPSSIIA 660
           +  T ++E   S  L + L+ L +  C            +NL+         R+P  I  
Sbjct: 725 IPETMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMRSVTGIERIPDCIKC 784

Query: 661 LKSLKTLNLSGCFKLENVPE 680
           L  LK L++ GC KL ++PE
Sbjct: 785 LHGLKELSIYGCPKLASLPE 804



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 135/313 (43%), Gaps = 49/313 (15%)

Query: 617 LSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
           L EL L  T ++++    + LT L+ + L  C  L  LP  +    +L+ L++ GC  L 
Sbjct: 606 LVELHLTDTQLEQLWEGTQPLTSLKKMVLVSCLCLKELPD-LANATNLEILDVCGCQSLV 664

Query: 677 NVPETLGQIESLEELDI----SGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRK 732
            +  ++G +  L+ LD+        VP   +  S   + +M      +LP +S   ++R+
Sbjct: 665 EIHSSVGNLHRLQSLDMIFCKKLQVVPTLFNLTSLESLVIMGSYQMRELPDIS--TTIRE 722

Query: 733 LNLTDCNLME----GALPSDIGNL----CSLKELYLSKNSFVSL------------PTSI 772
           L++ +  L E      L S +  L    C++   +++  S  +L            P  I
Sbjct: 723 LSIPETMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMRSVTGIERIPDCI 782

Query: 773 THLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDS 832
             L  L  + +  C +L SLP+LP ++  + V  C SL T L+      S    ++ LD 
Sbjct: 783 KCLHGLKELSIYGCPKLASLPELPRSLTTLTVYKCPSLET-LEPFPF-GSRIEDLSFLDC 840

Query: 833 LKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYN 892
            + LG K+      R  +     T+Q   V +PG  +P  F ++  G+ + +   SN Y 
Sbjct: 841 FR-LGRKA------RRLI-----TQQSSRVCLPGRNVPAEFHHRAIGNFVAIC--SNAYR 886

Query: 893 KKKLVGYAICCVF 905
                 + IC V 
Sbjct: 887 ------FKICAVI 893



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 48/195 (24%)

Query: 704  WYSYIPINLMRK-----SVALK-LPSLSGLCSLRKLNLTDC-NLMEGALPSDIGNLCSLK 756
            W    P+  ++K     S++LK +P LS    L++LNLT C +L+E  +PS IG+L  L+
Sbjct: 1519 WQGIQPLTNLKKMDLSGSLSLKEVPDLSNATHLKRLNLTGCWSLVE--IPSSIGDLHKLE 1576

Query: 757  ELYLSKNSFVSLPTSITH--LSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLL 814
            EL +  N  +SL    +H  L+ L  +E+  C +L+ +P +     +  V G   L    
Sbjct: 1577 ELEI--NLCISLQVFPSHLNLASLETLEMVGCWQLRKIPYVST---KSLVIGDTMLEEFP 1631

Query: 815  DALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWF- 873
            ++L           CL++ +++                   T+Q      PG E+P  F 
Sbjct: 1632 ESL-----------CLEAKRVI-------------------TQQSFRAYFPGKEMPAEFD 1661

Query: 874  MYQNEGSSITVTRPS 888
             +++ GSS+T+ RP+
Sbjct: 1662 DHRSFGSSLTI-RPA 1675


>gi|110741877|dbj|BAE98880.1| disease resistance like protein [Arabidopsis thaliana]
          Length = 1168

 Score =  285 bits (728), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 238/716 (33%), Positives = 351/716 (49%), Gaps = 66/716 (9%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV-----REISSKGG------ 64
           + +VRM+GI G  G+GKTTIAR +++ +S  F  S F+D       RE + KG       
Sbjct: 201 AEEVRMVGIWGSSGIGKTTIARALFNQLSRHFPVSKFIDRAFVYKSRE-TYKGANPDDPN 259

Query: 65  -LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNR 123
             + LQ   LS++L   D  I    D +  LG RL+ +K L++IDD+ D+  L SL G  
Sbjct: 260 MKLHLQGCFLSEILGKKDIKI----DHLGALGERLKHQKTLIIIDDLDDLVVLDSLVGKT 315

Query: 124 EWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLS 183
            WFG GSRII+ + ++  L+ HG+D +Y+    + + A ++F   AF    P +   +L 
Sbjct: 316 NWFGCGSRIIVITNNKQFLRAHGIDHIYEVSLPSKERAQEMFCQSAFGENSPPEGFEELV 375

Query: 184 ARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQEL-E 242
             I   AG LPL L V GS L GR  + W   L RL+ +    I + L++S+D +  + +
Sbjct: 376 VEIAWLAGSLPLGLTVFGSALRGRKKEYWVKMLPRLQNDLDGNIEETLKVSYDAIGNVKD 435

Query: 243 KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELG 302
           + +F  IAC F       +   L   G    I +  L++K LI V N+ + MH LLQE G
Sbjct: 436 QALFRLIACLFNHVKVRDIELLLADSGLDVNIALENLVDKSLIHVRNDHVEMHRLLQETG 495

Query: 303 QQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAF 362
           + IV+ QS +  G+R  L    +   VL+E  GT  V GI LD          C    AF
Sbjct: 496 RNIVRSQSTDNPGERVFLVDSNDSRTVLSEGIGTRKVLGISLDTSKVSE---FCVHENAF 552

Query: 363 SKMTNLRLLKICN---------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
             M NL  L I +         + LP  + Y S + + L W  +PLK +P    +   ++
Sbjct: 553 KGMGNLLFLDISSKTFIEEEVKVHLPEKINYYSVQPKQLIWDRFPLKCMPYTF-LRNLVK 611

Query: 414 IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
           + M  S++ +LW+G      LK + +  S+ L  +PD + A N+EKL    C  L E+  
Sbjct: 612 LEMHDSKLEKLWEGAMSFTCLKELDMWASKYLKEIPDLSKATNIEKLDFGHCWSLVELPS 671

Query: 474 SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLP---TTISGLKCLST 524
           S+   NKL+ LNM+ C  L TLP    +KSL+ LN      L++ P   T IS L    T
Sbjct: 672 SIRNLNKLLELNMEYCGELETLPTGFNLKSLDYLNFNECWKLRTFPEFATNISNLILAET 731

Query: 525 L--DVSGDLKFREFPEIVEHMEHLSELHLEGTA--------------IRGLPLSIEL--- 565
              +   +L F+   E+        E   +G                +  +P  +EL   
Sbjct: 732 SIEEYPSNLYFKNVRELSMGKADSDENKCQGVKPFMPMLSPTLTLLELWNIPNLVELSSS 791

Query: 566 ---LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL 622
              L+ L  L++  CR+LE LP  + NL+ L SL L GCS+LK+FP+I  ++K L    L
Sbjct: 792 FQNLNNLERLDICYCRNLESLPTGI-NLESLVSLNLFGCSRLKRFPDISTNIKYLD---L 847

Query: 623 DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENV 678
           D T I+EVP  IE    L  L +  C+ L  +  +I  LK L  ++ S C  L  V
Sbjct: 848 DQTGIEEVPWQIENFFNLTKLTMKGCRELKCVSLNIFKLKHLGEVSFSNCGALTRV 903



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 165/400 (41%), Gaps = 85/400 (21%)

Query: 519 LKCLSTLDVSGDLKFREFPEI--VEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
             CL  LD+      +E P++    ++E L   H    ++  LP SI  L+ L+ LN++ 
Sbjct: 629 FTCLKELDMWASKYLKEIPDLSKATNIEKLDFGHC--WSLVELPSSIRNLNKLLELNMEY 686

Query: 577 CRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIE- 635
           C  LE LP T  NLK L  L  + C KL+ FPE      ++S L L  TSI+E PS++  
Sbjct: 687 CGELETLP-TGFNLKSLDYLNFNECWKLRTFPEFA---TNISNLILAETSIEEYPSNLYF 742

Query: 636 ---------------------------LLTKLELLNLSDCKNLVRLPSSIIALKSLKTLN 668
                                      L   L LL L +  NLV L SS   L +L+ L+
Sbjct: 743 KNVRELSMGKADSDENKCQGVKPFMPMLSPTLTLLELWNIPNLVELSSSFQNLNNLERLD 802

Query: 669 LSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLC 728
           +  C  LE++P  +  +ESL                   + +NL   S   + P +S   
Sbjct: 803 ICYCRNLESLPTGI-NLESL-------------------VSLNLFGCSRLKRFPDIS--T 840

Query: 729 SLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELEDCK 787
           +++ L+L    + E  +P  I N  +L +L +        +  +I  L  L  +   +C 
Sbjct: 841 NIKYLDLDQTGIEE--VPWQIENFFNLTKLTMKGCRELKCVSLNIFKLKHLGEVSFSNCG 898

Query: 788 RLQ--SLPQLPPNIRQVRVNGCASLVTLLDALKL---CKSDSTMIAC--LDSLKLLGNKS 840
            L    L   P  +  ++ +  A +V+      L   C  +   + C  LD   +L  +S
Sbjct: 899 ALTRVDLSCYPSGVEMMKADN-ADIVSEETTSSLPDSCVLNVNFMDCVNLDREPVLHQQS 957

Query: 841 LAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGS 880
           + F+                S+++PG E+P +F Y+   S
Sbjct: 958 IIFN----------------SMILPGEEVPSYFTYRTSDS 981



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 43/255 (16%)

Query: 580 LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLT 638
           L+ +P T   L+ L  L++   SKL+K  E   S   L EL +  +  +KE+P  +   T
Sbjct: 598 LKCMPYTF--LRNLVKLEMHD-SKLEKLWEGAMSFTCLKELDMWASKYLKEIPD-LSKAT 653

Query: 639 KLELLNLSDCKNLVRLPSSI-----------------------IALKSLKTLNLSGCFKL 675
            +E L+   C +LV LPSSI                         LKSL  LN + C+KL
Sbjct: 654 NIEKLDFGHCWSLVELPSSIRNLNKLLELNMEYCGELETLPTGFNLKSLDYLNFNECWKL 713

Query: 676 ENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMR--------KSVALKLPSLSGL 727
              PE    I +L   + S    P +  + +   +++ +        + V   +P LS  
Sbjct: 714 RTFPEFATNISNLILAETSIEEYPSNLYFKNVRELSMGKADSDENKCQGVKPFMPMLSPT 773

Query: 728 CSLRKL-NLTDCNLMEGALPSDIGNLCSLKELYLSK-NSFVSLPTSITHLSKLLNIELED 785
            +L +L N+   NL+E  L S   NL +L+ L +    +  SLPT I +L  L+++ L  
Sbjct: 774 LTLLELWNIP--NLVE--LSSSFQNLNNLERLDICYCRNLESLPTGI-NLESLVSLNLFG 828

Query: 786 CKRLQSLPQLPPNIR 800
           C RL+  P +  NI+
Sbjct: 829 CSRLKRFPDISTNIK 843


>gi|13509215|emb|CAC35327.1| N1-A protein [Linum usitatissimum]
          Length = 1008

 Score =  283 bits (725), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 247/822 (30%), Positives = 403/822 (49%), Gaps = 80/822 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D   E++  L++  S+  ++IGI GMGGLGKTT+A+ VY+ +S +FE   FL+N+RE  
Sbjct: 213 IDFSVEEVVKLLNLDSTSEKIIGIYGMGGLGKTTLAKAVYNKVSMQFERCCFLNNIREAL 272

Query: 61  SKG-GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            K  G+V+LQ +++S +L+       N  DG+ M+  R+ R K+ +V+DDV +  +   +
Sbjct: 273 LKNDGVVALQNKVISDILRKDFGQAKNASDGVQMIRERVSRHKIFVVLDDVNESFRFDDI 332

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G    F + SR ++T+RD   L+     +++K  G+++D +L+LF+  AF    P ++ 
Sbjct: 333 FGKLTAFSADSRFLVTTRDARTLERLRGCKLFKHEGMSHDHSLKLFSKHAFGVDYPPEDY 392

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             L    ++   GLPLAL+V+GS L       W   L  L+  P  E+ D L+IS++ L 
Sbjct: 393 ASLCEEFVQVGSGLPLALKVIGSLLFRTEKSFWEDKLIELKAIPAVEVQDRLKISYNELT 452

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWMHDLL 298
           + EK+IFLD+ACFF G  ++        CGF+P   IR L+++ L+ +++N   WMHD +
Sbjct: 453 DNEKQIFLDVACFFVGAKKEIPMYMWSDCGFYPTTTIRTLVQRSLVRINDNEEFWMHDHI 512

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
           ++LG+ IV+ +S     KRSR+W   +   +L    G + VE + +D            +
Sbjct: 513 RDLGRAIVREESQNPY-KRSRIWSNNDAIDILKNREGNDCVEALRVDMRGEG----FALT 567

Query: 359 AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
            + F + + LR L++ N  L    + +   LR L  R Y     PS L ++K + + +  
Sbjct: 568 DEEFKQFSRLRFLEVLNGDLSGNFKNVLPSLRWL--RVYHGDPRPSGLNLNKLMILELEV 625

Query: 419 SRIGELWKG---IKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
           S + + W+G   IK   KLKV+ L   + L ++PD +    LE L    C R        
Sbjct: 626 SDVTDSWEGWNEIKAAGKLKVVHLMCCKGLEKVPDLSTCRGLELLRFSICRR-------- 677

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
            +H +L I N KD   L     +I           +L   +  L+ L  LDV G     E
Sbjct: 678 -MHGELDIGNFKDLKVLDIFQTRI----------TALKGQVESLQNLQQLDV-GSSGLIE 725

Query: 536 FPEIVEH---MEHLSELHLEGTAIRGLPLSIELL-----------SGLVLLNLKNCRSLE 581
            P  +     +E+L+  +++   +  LP  +++L           S L  L+++   +L 
Sbjct: 726 VPAGISKLSSLEYLNLTNIKHDKVETLPNGLKILLISSFSLSALPSSLFRLDVRYSTNLR 785

Query: 582 ILP--VTVSNLKCLR-------------SLKLSGCSKLKKFPEI-----VRSMKDLSELF 621
            LP   +V+NL  LR              LKL  C  L+  P +     + ++  L EL 
Sbjct: 786 RLPNLASVTNLTRLRLEEVGIHGIPGLGELKLLECLFLRDAPNLDNLDGLENLVLLKELA 845

Query: 622 LDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPET 681
           ++   I E   S+  LTKL  L +  C  L  +       +SL  L +SGC  L  V E+
Sbjct: 846 VERCRILEKLPSLAELTKLHKLVIGQCNILGEICGLGNLGESLSHLEISGCPCL-TVVES 904

Query: 682 LGQIESLEELDISGTAV----PHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTD 737
           L  + +L  L++SG  +    P S S Y+ +      K    +LP L+ L +LR L +  
Sbjct: 905 LHSLLNLGTLELSGYGITNILPPSLSIYTKLK---SLKVYDSQLPDLTNLKNLRCLKICG 961

Query: 738 C-NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
           C N +E    + +  L SL+EL +  +S   L   +T L KL
Sbjct: 962 CDNFIE---ITGLHTLESLEELRVMGSSIRKL--DLTGLVKL 998



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 26/240 (10%)

Query: 563 IELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL 622
           I+    L +++L  C+ LE +P  +S  + L  L+ S C ++    +I  + KDL  L +
Sbjct: 638 IKAAGKLKVVHLMCCKGLEKVP-DLSTCRGLELLRFSICRRMHGELDI-GNFKDLKVLDI 695

Query: 623 DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCF--KLENVPE 680
             T I  +   +E L  L+ L++     L+ +P+ I  L SL+ LNL+     K+E +P 
Sbjct: 696 FQTRITALKGQVESLQNLQQLDVG-SSGLIEVPAGISKLSSLEYLNLTNIKHDKVETLPN 754

Query: 681 TLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVAL-----KLPSLSGLCSLRKLNL 735
                  L+ L IS  ++       S +P +L R  V       +LP+L+ + +L +L L
Sbjct: 755 ------GLKILLISSFSL-------SALPSSLFRLDVRYSTNLRRLPNLASVTNLTRLRL 801

Query: 736 TDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQL 795
            +  +    +P  +G L  L+ L+L     +     + +L  L  + +E C+ L+ LP L
Sbjct: 802 EEVGIH--GIPG-LGELKLLECLFLRDAPNLDNLDGLENLVLLKELAVERCRILEKLPSL 858


>gi|297791225|ref|XP_002863497.1| hypothetical protein ARALYDRAFT_916959 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309332|gb|EFH39756.1| hypothetical protein ARALYDRAFT_916959 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 846

 Score =  283 bits (723), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 216/679 (31%), Positives = 338/679 (49%), Gaps = 96/679 (14%)

Query: 26  GMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLADNSIW 85
           GM G+GKTT+ + +Y     +F     +D +R  S    L  L + LL            
Sbjct: 217 GMPGIGKTTLLKELYKTWQGKFTRHALIDQIRVKSKHLELDRLPQMLLDPY--------- 267

Query: 86  NVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG---SRIIITSRDEHLL 142
                     S+L  +KVL+V+DDV   +Q+ +L    +W   G   SR++I + D  L 
Sbjct: 268 ----------SQLHERKVLVVLDDVSKREQIDALREILDWIKEGKEGSRVVIATSDVSL- 316

Query: 143 KTHG-VDEVYKPHGLNYDEALQLFNMKAFKTYQP---LQECVQLSARIIRYAGGLPLALE 198
            T+G VD+ Y    LN+ ++LQLF+  AF   Q     ++ ++LS   + YA G PL+L+
Sbjct: 317 -TNGLVDDTYMVQNLNHRDSLQLFHYHAFIDDQANPQKKDFMKLSEGFVHYARGHPLSLK 375

Query: 199 VLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDR 258
           +LG  L+ +++D W S +++L   P   I+ + Q+S+D L   +K  FLDIAC F+  D+
Sbjct: 376 ILGGELNKKNMDHWNSKMKKLAQSPCPNIVSVFQVSYDELTSEQKDAFLDIAC-FRSQDK 434

Query: 259 DYVTNFLEGCGF---HPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELG 315
           +YV + L          +  ++ L +K LI   +  + MHDLL +  +++  + S ++  
Sbjct: 435 NYVESLLASSDLGSAEAMSAVKSLTDKFLINTCDGRVEMHDLLYKFSRELDLKASNQDGS 494

Query: 316 KRSRLWKEEE-----VCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRL 370
           ++ RLW  ++     + +VL        V GI LD    ++E  L               
Sbjct: 495 RQRRLWLHQDIIKGGIINVLQNKMKAANVRGIFLDLSEVKDETSL--------------- 539

Query: 371 LKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKH 430
                           +++R L W  +PL+ LP++      +++ + YS I +LW G K 
Sbjct: 540 ----------------DQVRCLHWLKFPLETLPNDFNPINLVDLRLPYSEIEQLWDGDKD 583

Query: 431 LDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCT 490
              L+ + L+HS  L  +   + A  L++L LEGCT L  +   +     L  LN+K CT
Sbjct: 584 TPCLRWVDLNHSSKLCSLSGLSKAEKLQRLNLEGCTTLKALPHDMKKMKMLAFLNLKGCT 643

Query: 491 SLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELH 550
           SL +LP         ++NL S          L TL +SG   F+EFP I +++E    L+
Sbjct: 644 SLESLP---------EMNLIS----------LKTLTLSGCSTFKEFPLISDNIE---TLY 681

Query: 551 LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEI 610
           L+GTAI  LP ++E L  LV+LN+K+C+ LE +P  V  LK L+ L LS C  LK FPEI
Sbjct: 682 LDGTAISQLPTNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNLKIFPEI 741

Query: 611 VRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLS 670
             +M  L+ L LDGT+I+ +P     L  L+ L LS    +  LP  I  L  LK L+L 
Sbjct: 742 --NMSSLNILLLDGTAIEVMPQ----LPSLQYLCLSRNAKISYLPDGISQLSQLKWLDLK 795

Query: 671 GCFKLENVPETLGQIESLE 689
            C  L +VPE    ++ L+
Sbjct: 796 YCTSLTSVPEFPPNLQCLD 814



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/272 (35%), Positives = 142/272 (52%), Gaps = 57/272 (20%)

Query: 544 EHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
           E L  L+LEG T ++ LP  ++ +  L  LNLK C SLE LP    NL  L++L LSGCS
Sbjct: 608 EKLQRLNLEGCTTLKALPHDMKKMKMLAFLNLKGCTSLESLPEM--NLISLKTLTLSGCS 665

Query: 603 KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
             K+FP I     ++  L+LDGT+I ++P+++E L +L +LN+ DCK L  +P  +  LK
Sbjct: 666 TFKEFPLIS---DNIETLYLDGTAISQLPTNMEKLQRLVVLNMKDCKMLEEIPGRVGELK 722

Query: 663 SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
           +L+ L LS C  L+  PE    + SL  L + GTA+                  V  +LP
Sbjct: 723 ALQELILSDCLNLKIFPEI--NMSSLNILLLDGTAI-----------------EVMPQLP 763

Query: 723 SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS-LPTSITHLSKLLNI 781
           SL  LC                               LS+N+ +S LP  I+ LS+L  +
Sbjct: 764 SLQYLC-------------------------------LSRNAKISYLPDGISQLSQLKWL 792

Query: 782 ELEDCKRLQSLPQLPPNIRQVRVNGCASLVTL 813
           +L+ C  L S+P+ PPN++ +  +GC+SL T+
Sbjct: 793 DLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTV 824


>gi|227438225|gb|ACP30602.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 938

 Score =  282 bits (721), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 235/743 (31%), Positives = 352/743 (47%), Gaps = 62/743 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M +R  +++  +   S  V++IGI G  G+GKTT ARV+Y+ +SH F  S FL+++R   
Sbjct: 193 MGARVTEIKSKIILQSELVKVIGIFGPAGIGKTTTARVLYNQLSHAFPFSTFLEDIRGSY 252

Query: 61  SKGG------LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
            K         + LQ+ LL Q+   +D  + ++    +ML      KKVL+V+D+V +  
Sbjct: 253 EKPCGNDYRLKLRLQKNLLCQIFNQSDIEVRHLRGAQEMLSD----KKVLVVLDEVDNWW 308

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGV--DEVYKPHGLNYDEALQLFNMKAFKT 172
           QL+ +A    W G GS IIIT+ D  LLK  G+  D +YK +    DE+LQ+F   AF  
Sbjct: 309 QLEEMAKQPGWVGPGSMIIITTEDRKLLKALGLGSDHIYKMNFPTEDESLQIFCQYAFGQ 368

Query: 173 YQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQ 232
             P      L+  +    G LPL L V+GS+L G S DEW   L  L      EI   L+
Sbjct: 369 KSPDDGFESLAREVTWLVGDLPLGLRVMGSYLRGMSKDEWIEALPWLRSTLDREIESTLR 428

Query: 233 ISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-- 290
            S+D L++ EK +FL +AC F G     + ++          G+ VL +K LIT+ +   
Sbjct: 429 FSYDALRDNEKTLFLHVACLFGGFYASSIKSYFANSSLEVNHGLEVLAQKSLITIDHKHE 488

Query: 291 TLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHE 350
            + MH LLQ++G++IV++Q  E  GKR  LW  +++ HVL E T T  V GI       E
Sbjct: 489 RVHMHILLQQMGREIVKKQCTENPGKRQFLWDTKDISHVLDEDTATGNVLGINTTWTGEE 548

Query: 351 NEVYLCASAKAFSKMTNLR---LLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
            ++    +  AF  M NL+   L     +  P GL+ L ++L LL W   PL+  PS   
Sbjct: 549 IQI----NKSAFQGMNNLQFLLLFSYSTIHTPEGLDCLPDKLILLHWDRSPLRIWPSTFS 604

Query: 408 MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
               +E+ M  S+   LW+GIK L  L+ + LS S +L ++PD + A +LE L L  C  
Sbjct: 605 GKCLVELRMQNSKFEMLWEGIKPLSCLRTLDLSSSWDLKKIPDLSKATSLEVLQLGDCRS 664

Query: 468 LYEIHPSLLLHNKLIILNMKDCTSL---ITLPGKILMKSLEKLNLKSLPTTISGLKCLST 524
           L E+  S+    KL  LN+  CT +     +P  I +  L    +K +P  I  L  L  
Sbjct: 665 LLELTSSISSATKLCYLNISRCTKIKDFPNVPDSIDVLVLSHTGIKDVPPWIENLFRLRK 724

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIE--------LLSGLVLLNLKN 576
           L ++G  K +     +  +E+L  L L          + E        +   ++     +
Sbjct: 725 LIMNGCKKLKTISPNISKLENLEFLALNNYLFCAYAYAYEDDQEVDDCVFEAIIEWG-DD 783

Query: 577 CRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIEL 636
           C+   IL    S+ K    L +  C   K F   +        L L    IK +P  I  
Sbjct: 784 CKHSWILR---SDFKVDYILPI--CLPEKAFTSPI-------SLCLRSYGIKTIPDCIGR 831

Query: 637 LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
           L+ L  L++ +C+ LV LP       SL  L+  GC             ESL+ +D S  
Sbjct: 832 LSGLTKLDVKECRRLVALPP---LPDSLLYLDAQGC-------------ESLKRIDSSSF 875

Query: 697 AVPHSTSWYSYIPINLMRKSVAL 719
             P     ++Y  INL +K+  L
Sbjct: 876 QNPEICMNFAYC-INLKQKARKL 897



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 162/389 (41%), Gaps = 102/389 (26%)

Query: 549 LHLEGTAIRGLPLSIELLSG--LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKK 606
           LH + + +R  P +    SG  LV L ++N +  E+L   +  L CLR+L LS    LKK
Sbjct: 589 LHWDRSPLRIWPST---FSGKCLVELRMQNSK-FEMLWEGIKPLSCLRTLDLSSSWDLKK 644

Query: 607 FPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKT 666
            P++ ++                        T LE+L L DC++L+ L SSI +   L  
Sbjct: 645 IPDLSKA------------------------TSLEVLQLGDCRSLLELTSSISSATKLCY 680

Query: 667 LNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMR---------KSV 717
           LN+S C K+++ P      +S++ L +S T +     W      NL R         K +
Sbjct: 681 LNISRCTKIKDFPNV---PDSIDVLVLSHTGIKDVPPWIE----NLFRLRKLIMNGCKKL 733

Query: 718 ALKLPSLSGLCSLRKLNLT------------------DC---NLMEGA--------LPSD 748
               P++S L +L  L L                   DC    ++E          L SD
Sbjct: 734 KTISPNISKLENLEFLALNNYLFCAYAYAYEDDQEVDDCVFEAIIEWGDDCKHSWILRSD 793

Query: 749 -----IGNLCSLKELYLSKNSFV-------SLPTSITHLSKLLNIELEDCKRLQSLPQLP 796
                I  +C  ++ + S  S         ++P  I  LS L  +++++C+RL +LP LP
Sbjct: 794 FKVDYILPICLPEKAFTSPISLCLRSYGIKTIPDCIGRLSGLTKLDVKECRRLVALPPLP 853

Query: 797 PNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSM-LREYLEAVSN 855
            ++  +   GC SL   +D+      +  M             + A+ + L++    +  
Sbjct: 854 DSLLYLDAQGCESL-KRIDSSSFQNPEICM-------------NFAYCINLKQKARKLIQ 899

Query: 856 TRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
           T      V+PG E+P  F ++   SS+T+
Sbjct: 900 TSACKYAVLPGEEVPAHFTHRASSSSLTI 928


>gi|297848238|ref|XP_002892000.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337842|gb|EFH68259.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 861

 Score =  282 bits (721), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 209/621 (33%), Positives = 329/621 (52%), Gaps = 58/621 (9%)

Query: 18  DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK------GGLVSLQRQ 71
           +VRMIGI G  G+GKTTIAR +++ +S  F+ S  +++++    K         + LQ +
Sbjct: 214 EVRMIGIWGPPGIGKTTIARFLFNQVSSRFQNSALIEDIKGSYPKPCFDEYNAKLQLQYK 273

Query: 72  LLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSR 131
           +LS+++   D  I      + +   RL+ + V LV+DDV  + QL++LA N +WFG  SR
Sbjct: 274 MLSRMINQKDIMI----PHLGVAQERLRNRNVFLVLDDVDRLAQLEALANNVQWFGPRSR 329

Query: 132 IIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAG 191
           IIIT+ D  LL  HG++ +YK    + DEALQ+F M AF    P     +L+  I    G
Sbjct: 330 IIITTEDRSLLNAHGINHIYKVGFPSNDEALQMFCMYAFGQKSPKDGFYELAREITYLVG 389

Query: 192 GLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIAC 251
            LPL L V+GS   G S ++W   + RL      +I  IL+ SFD L + +K +FL IAC
Sbjct: 390 ELPLGLRVIGSHFRGLSKEQWSMEISRLRTNLDGDIESILKFSFDALCDEDKDLFLHIAC 449

Query: 252 FFKGNDRDYVTNFLEGCGFHPVIG-IRVLIEKCLITVHNN----TLWMHDLLQELGQQIV 306
           FF   + + +  F+ G  F  +   + VL+EK LI++       ++ MH+LL +LG++IV
Sbjct: 450 FFNNENINKLEEFI-GQRFKDLSQRLYVLVEKSLISIERFLEYVSIKMHNLLAQLGKEIV 508

Query: 307 QRQSPEELGKRSRLWKEEEVCHVLT-ESTGTELVEGIVLDNYHHENEVYLCASAKAFSKM 365
           +++S  E G+R  L+  +++C V++  +T T  V GI       +++ +L  + KAF  M
Sbjct: 509 RKES-REPGQRRFLFDNKDICEVVSGYTTNTGSVVGI-------DSDSWLNITEKAFEGM 560

Query: 366 TNLRLLKIC--NLQLPN------GLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
            NL+ L++   N   PN       L ++S++LRL+ W  +P+  L     ++  +E+ M 
Sbjct: 561 PNLQFLRVVVYNFDHPNIISSSGPLTFISSKLRLIEWWYFPMTSLRFINNLEFLVELKMR 620

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
           YS++ +LW GIK L  LK M L++SENL  +P+ + A +LE+L LEGC+ L E+  S+  
Sbjct: 621 YSKLEKLWDGIKLLRNLKCMDLANSENLKELPNLSMATSLEELNLEGCSSLVELPSSVGN 680

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKC--LSTLDVS--GDLKF 533
              L  L+++ C+ L++LP            L   P  +    C  L  LD S       
Sbjct: 681 LTNLQKLSLEGCSRLVSLP-----------QLPDSPMVLDAENCESLEKLDCSFYNPCIH 729

Query: 534 REFPEIVEHMEHLSELHLEGTAIR--GLPLSIELLS------GLVLLNLKNCRSLEILPV 585
             F    +  +   +L ++ +  R   LP    L+S       L++LN +NC SLE L  
Sbjct: 730 LNFANCFKLNQEARDLLIQTSTARLVVLPGCSRLVSLPQLPDSLMVLNAENCESLEKLDC 789

Query: 586 TVSNLKCLRSLKLSGCSKLKK 606
           + SN      L  S C KL K
Sbjct: 790 SFSNPGTW--LNFSYCFKLNK 808



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 62/299 (20%)

Query: 587 VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNL 645
           ++NL+ L  LK+   SKL+K  + ++ +++L  + L +  ++KE+P+ + + T LE LNL
Sbjct: 608 INNLEFLVELKMR-YSKLEKLWDGIKLLRNLKCMDLANSENLKELPN-LSMATSLEELNL 665

Query: 646 SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWY 705
             C +LV LPSS+  L +L+ L+L GC +L ++P+                 +P S    
Sbjct: 666 EGCSSLVELPSSVGNLTNLQKLSLEGCSRLVSLPQ-----------------LPDS---- 704

Query: 706 SYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSF 765
              P+ L  ++            SL KL   DC+     +  +  N   L +    +   
Sbjct: 705 ---PMVLDAENCE----------SLEKL---DCSFYNPCIHLNFANCFKLNQ----EARD 744

Query: 766 VSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDST 825
           + + TS   L     + L  C RL SLPQLP ++  +    C SL       KL  S S 
Sbjct: 745 LLIQTSTARL-----VVLPGCSRLVSLPQLPDSLMVLNAENCESLE------KLDCSFSN 793

Query: 826 MIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITV 884
               L       N S  F + +E  + +  T     VV+P  E+P  F Y+  G+S+TV
Sbjct: 794 PGTWL-------NFSYCFKLNKEARDLLIQTSSVNVVVLPCKEVPACFTYRGYGNSVTV 845



 Score = 43.1 bits (100), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 30/156 (19%)

Query: 556 IRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMK 615
           ++ LP ++ + + L  LNL+ C SL  LP +V NL  L+ L L GCS+L   P++     
Sbjct: 648 LKELP-NLSMATSLEELNLEGCSSLVELPSSVGNLTNLQKLSLEGCSRLVSLPQLPD--- 703

Query: 616 DLSELFLDGTSIKEVPSSIELLTKLEL--------LNLSDCKNLVRLPSS-IIALKSLKT 666
             S + LD         + E L KL+         LN ++C  L +     +I   + + 
Sbjct: 704 --SPMVLDA-------ENCESLEKLDCSFYNPCIHLNFANCFKLNQEARDLLIQTSTARL 754

Query: 667 LNLSGCFKLENVPETLGQI--------ESLEELDIS 694
           + L GC +L ++P+    +        ESLE+LD S
Sbjct: 755 VVLPGCSRLVSLPQLPDSLMVLNAENCESLEKLDCS 790


>gi|227438269|gb|ACP30624.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 590

 Score =  281 bits (720), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 207/609 (33%), Positives = 322/609 (52%), Gaps = 49/609 (8%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M++   ++  ++   S+DVRM+GI G  G+GKTTIAR +Y+ +S+ F  + F++++R   
Sbjct: 14  MENHITQISSMLSLDSNDVRMVGILGPAGIGKTTIARALYNKLSNSFTHTAFMESIRGSG 73

Query: 61  SK------GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
            +        ++ LQ Q LS+     D  I +    + +   RL+ KKVLLV+DDVVD+K
Sbjct: 74  ERTHSDDYAFMLHLQEQFLSKTFNHKDLKIHH----LGVAEERLKDKKVLLVLDDVVDLK 129

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL+++AGN +WFG GSRII+T++   LL+ HG+D +Y     +  +A ++F + AF    
Sbjct: 130 QLKAMAGNSQWFGCGSRIIMTTKAARLLEAHGIDHIYHVGLPSLAQAYEIFCLYAFGQKF 189

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           P      L+  +   AG LPL L V GS L G S +EW   L RL      +I  +L+ S
Sbjct: 190 PYDGYEDLAMEVTGLAGDLPLGLRVFGSHLRGMSKEEWIEALPRLRTSLDGDIEKVLRFS 249

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLW 293
           ++ L + +K +FL IAC F+G    Y+   L         G++VL    LI++     L 
Sbjct: 250 YEALCDKDKDLFLHIACLFEGESISYLEKCLAHSDLDVRHGLKVLANNSLISITEEERLV 309

Query: 294 MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEV 353
           MH+L+++LG++IV+++  +E  +R  L    E+C VLT++TG++ V GI LD    ++E 
Sbjct: 310 MHNLVEQLGKEIVRQEHKDEPERRKFLVDAREICDVLTDNTGSKSVLGIDLDIMAIKDE- 368

Query: 354 YLCASAKAFSKMTNLRLLKICN---------LQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
            LC   +AF  MT L+ L+  +         L LP GL  L  +LRLL W  +PL+ LP 
Sbjct: 369 -LCIDKRAFEGMTRLQFLRFKSPYGSGKNNKLILPQGLNNLPRKLRLLCWDEFPLRCLPP 427

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEG 464
           +   +  + + M  S I +LW+G   +D      +S+S  L  +P+ + A NLE LIL G
Sbjct: 428 DFAAEFLVILEMRNSSIEKLWEGSPLMD------MSYSLKLKDIPNVSNATNLETLILNG 481

Query: 465 CTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLST 524
           C  L EI       ++L  L M  C  L  LP  I M+SL                    
Sbjct: 482 CESLVEIPTWFKNLSRLTHLKMVGCKKLKDLPTNINMESLYH------------------ 523

Query: 525 LDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILP 584
           LD+S   + + FPEI   + +L    LE T I  +P SI        L+++ C+SL + P
Sbjct: 524 LDLSHCTQLKTFPEISTRIGYLD---LENTGIEEVPSSIRSWPDFAKLSMRGCKSLRMFP 580

Query: 585 VTVSNLKCL 593
             + +++ L
Sbjct: 581 DVLDSMEEL 589



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 104/245 (42%), Gaps = 39/245 (15%)

Query: 457 LEKLILEGCTRL----YEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSL 512
           ++K   EG TRL    ++       +NKLI+        L  LP K+ +   ++  L+ L
Sbjct: 371 IDKRAFEGMTRLQFLRFKSPYGSGKNNKLILPQ-----GLNNLPRKLRLLCWDEFPLRCL 425

Query: 513 PTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIEL------- 565
           P   +                 EF  I+E      E   EG+ +  +  S++L       
Sbjct: 426 PPDFAA----------------EFLVILEMRNSSIEKLWEGSPLMDMSYSLKLKDIPNVS 469

Query: 566 -LSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG 624
             + L  L L  C SL  +P    NL  L  LK+ GC KLK  P  + +M+ L  L L  
Sbjct: 470 NATNLETLILNGCESLVEIPTWFKNLSRLTHLKMVGCKKLKDLPTNI-NMESLYHLDLSH 528

Query: 625 -TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLG 683
            T +K  P   E+ T++  L+L +   +  +PSSI +      L++ GC  L   P+ L 
Sbjct: 529 CTQLKTFP---EISTRIGYLDLENT-GIEEVPSSIRSWPDFAKLSMRGCKSLRMFPDVLD 584

Query: 684 QIESL 688
            +E L
Sbjct: 585 SMEEL 589



 Score = 47.4 bits (111), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 5/128 (3%)

Query: 596 LKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRL 654
           + +S   KLK  P  V +  +L  L L+G  S+ E+P+  + L++L  L +  CK L  L
Sbjct: 454 MDMSYSLKLKDIPN-VSNATNLETLILNGCESLVEIPTWFKNLSRLTHLKMVGCKKLKDL 512

Query: 655 PSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHST-SWYSYIPINLM 713
           P++I  ++SL  L+LS C +L+  PE   +I  L+  +     VP S  SW  +  ++ M
Sbjct: 513 PTNI-NMESLYHLDLSHCTQLKTFPEISTRIGYLDLENTGIEEVPSSIRSWPDFAKLS-M 570

Query: 714 RKSVALKL 721
           R   +L++
Sbjct: 571 RGCKSLRM 578


>gi|13509207|emb|CAC35321.1| Ngc-D protein [Linum usitatissimum]
          Length = 1108

 Score =  281 bits (720), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 254/883 (28%), Positives = 434/883 (49%), Gaps = 83/883 (9%)

Query: 1    MDSRCEKLRFLM--DSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE 58
            +DSR +++  L+  DS +S+ ++IGI GMGGLGKTT+A+ VYD +S +FE   FL+N+R+
Sbjct: 214  IDSRVDEVVGLLNLDSSTSE-KIIGIHGMGGLGKTTLAKAVYDKVSTKFERCYFLENIRD 272

Query: 59   -ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
             +S K G+  LQ +++S +L+   N   N  DGI ++  R+ R K+L+V+DDV +  Q  
Sbjct: 273  TLSEKNGVSILQNKIISGILRKDFNEAKNASDGIRIIRDRVCRHKLLIVLDDVDEKFQFD 332

Query: 118  SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
             + G    F + SR +IT+RD   L+     ++++   ++ D +L LFN  AF    P +
Sbjct: 333  DVLGKLNNFSTNSRFLITTRDARGLELLQEYKMFELQEMSPDHSLTLFNKHAFDVDCPPK 392

Query: 178  ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
            +   LS   ++ A GLPL ++V+GS L       W   LE  +   P+++ + L+IS++ 
Sbjct: 393  DYAILSKEFVQAAAGLPLYIKVIGSLLFRMDKIFWEEKLEEFKKISPTKVQERLKISYNE 452

Query: 238  LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-------- 289
            L   EK+IFLDIAC+F G+ + Y     E C F+P   IR LI++ LI +          
Sbjct: 453  LTHNEKQIFLDIACYFIGSQKIYPIFMWEDCDFYPESTIRSLIQRSLIKLQRSRIKGDVL 512

Query: 290  NTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHH 349
            NT WMHD + +LG+ IV+ +  +   KRSR+W  ++  ++L    GT+ VE + +D    
Sbjct: 513  NTFWMHDHIIDLGRAIVREEKNQNPYKRSRIWSNKDAVNMLKHKKGTDCVEVLTVDMEGE 572

Query: 350  ENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMD 409
            +    L  + K F K+T LR LK+ N +L    + +   LR L         +PS L + 
Sbjct: 573  D----LILTNKEFEKLTMLRYLKVSNARLAGDFKDVLPNLRWLLLES--CDSVPSGLYLK 626

Query: 410  KTIEIYMCYSRIGELWKGIKHLD---KLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
            K + + +    +G+ WKG   L    KLK + L    +L ++PDF+   +LE L  +GC 
Sbjct: 627  KLVRLDLHDCSVGDSWKGWNELKVARKLKAVSLKRCFHLKKVPDFSDCGDLEFLNFDGCR 686

Query: 467  RLY-EIHPSLLLHNKLIILNMKDCTSLITLPGKIL---MKSLEKLNLKSLPTTISGLKCL 522
             +  E+        + + ++    T +    G++L     S+   +LK +P  IS L  L
Sbjct: 687  NMRGEVDIGNFKSLRFLYISKTKITKIKGEIGRLLNLKYLSVGDSSLKEVPAGISKLSSL 746

Query: 523  STLDVSGDLKFR-EFPEIVEHMEHLSELHLEGTAIRGLPLS-------IELLSGLV---- 570
              L ++    ++ +F E++     L+ L++     +  P +       +  LS L+    
Sbjct: 747  EFLALALTDSYKSDFTEMLP--TSLTLLYISNDTQKFCPDTSSENLQRLPNLSNLINLSV 804

Query: 571  ----------LLNLKNCRSLEILPV----------TVSNLKCLRSLKLSGCSKLKKFPEI 610
                      +L L   + LE L +           + NL  L+ L++ GC  L+K P +
Sbjct: 805  LYLIDVGIGEILGLGELKMLEYLSIGRASRIVHLDGLENLVLLQHLRVEGCRILRKLPSL 864

Query: 611  VRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNL 669
            + ++  L  L++ D   + E+    +L   L  L +  C  L+ L  S+ ++  L+ L L
Sbjct: 865  I-ALTRLQLLWIQDCPLVTEINGMGQLWESLSHLKVVGCSALIGL-ESLHSMVKLERLLL 922

Query: 670  SGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVAL---------K 720
             GC   E +P +L     L EL +   A+P    W  +  ++ ++    L         +
Sbjct: 923  VGCVLTETMPPSLSMFTKLTELSL--CAMP----WKQFPDLSNLKNLRVLCMSFCQELIE 976

Query: 721  LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLN 780
            +P L  L SL+ L++  C  +      D+  L  LK L +     +     +  L  L  
Sbjct: 977  VPGLDALESLKWLSMEGCRSIRKV--PDLSGLKKLKTLDVESCIQLKEVRGLERLESLEE 1034

Query: 781  IELEDCKRLQSLPQLP--PNIRQVRVNGCASL--VTLLDALKL 819
            +++  C+ ++ LP L    N+R++ + GC  L  V  L+ L+L
Sbjct: 1035 LKMSGCESIEELPNLSGLKNLRELLLKGCIQLKEVNGLEGLEL 1077


>gi|357513733|ref|XP_003627155.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355521177|gb|AET01631.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1223

 Score =  281 bits (720), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 210/605 (34%), Positives = 317/605 (52%), Gaps = 56/605 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D   E +  L+ +    +  IGI GM G+GKTTIA+ ++      ++   FL+ + E S
Sbjct: 189 VDENSEHIELLLKT----IPRIGIWGMSGIGKTTIAKQMFSKNFAHYDNVCFLEKISEDS 244

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            K G + +  QLL +LLK  + +  +V      +  RL RKKV +V+DDV +  QL  L 
Sbjct: 245 EKFGPIYVCNQLLRELLK-REITASDVHGLHTFITRRLFRKKVFIVLDDVNNTTQLDDLC 303

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
                 G  SR+IIT+RD H L    VDE+Y+       ++L+LF+++AFK   PL+   
Sbjct: 304 RVLGDLGPNSRLIITTRDRHTLGGK-VDEIYEVKTWKLRDSLKLFSLRAFKQDHPLKGYE 362

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEI--EPPSEILDILQISFDGL 238
           ++S R +  AGG+PLALEVLGS    R  + W S L   E   E   +I  +L+ S++GL
Sbjct: 363 RVSERAVECAGGVPLALEVLGSHFHSRKQEFWESELNLYENKGEAFPDIQKVLRTSYNGL 422

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT-LWMHDL 297
              +K++FLDIA FFKG ++D VT  L+  GF+   GI +L +K LIT+ NN  + MHDL
Sbjct: 423 SWRQKEMFLDIAFFFKGENKDIVTRILDAFGFNATSGIEILEDKTLITISNNDRIQMHDL 482

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           LQ++   IV R+   + GKRSRL   +++C VL  + G++ +EGI+ D      +V +  
Sbjct: 483 LQKMAFDIV-REEYNDRGKRSRLRDAKDICDVLGNNKGSDAIEGIIFD---LSQKVDIHV 538

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
            A AF  M  LR LK     +P G + L            P          ++ I+I + 
Sbjct: 539 QADAFKLMHKLRFLK---FHIPKGKKKLE-----------P-------FHAEQLIQICLP 577

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
           +S I  LW G++ L  L+ + LS  + L  +PD +GA  L++L L GC  L E+ PS   
Sbjct: 578 HSNIEHLWYGMQELVNLEAIDLSECKQLRHLPDLSGALKLKQLRLSGCEELCELRPSAFS 637

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
            + L  L +  C  L +L G+  + SL+  ++K       G K L    +S D       
Sbjct: 638 KDTLHTLLLDRCIKLESLMGEKHLTSLKYFSVK-------GCKNLKEFSLSSD------- 683

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLK 597
                   +  L L  T I  L  SI  ++ L LLNL++  +L  LP+ +S+L+ L  L+
Sbjct: 684 -------SIKGLDLSKTGIEILHPSIGDMNNLRLLNLEDL-NLTNLPIELSHLRSLTELR 735

Query: 598 LSGCS 602
           +S CS
Sbjct: 736 VSTCS 740



 Score = 46.6 bits (109), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 106/227 (46%), Gaps = 44/227 (19%)

Query: 593 LRSLKL---SGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK 649
           LR LK     G  KL+ F       + L ++ L  ++I+ +   ++ L  LE ++LS+CK
Sbjct: 549 LRFLKFHIPKGKKKLEPF-----HAEQLIQICLPHSNIEHLWYGMQELVNLEAIDLSECK 603

Query: 650 NLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIP 709
            L  LP    ALK LK L LSGC             E L EL           S +S   
Sbjct: 604 QLRHLPDLSGALK-LKQLRLSGC-------------EELCEL---------RPSAFSKDT 640

Query: 710 INLMRKSVALKLPSLSG---LCSLRKLNLTDC-NLMEGALPSDIGNLCSLKELYLSKNSF 765
           ++ +     +KL SL G   L SL+  ++  C NL E +L SD     S+K L LSK   
Sbjct: 641 LHTLLLDRCIKLESLMGEKHLTSLKYFSVKGCKNLKEFSLSSD-----SIKGLDLSKTGI 695

Query: 766 VSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIR---QVRVNGCAS 809
             L  SI  ++ L  + LED   L +LP    ++R   ++RV+ C+S
Sbjct: 696 EILHPSIGDMNNLRLLNLEDL-NLTNLPIELSHLRSLTELRVSTCSS 741



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 33/187 (17%)

Query: 579 SLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLT 638
           ++E L   +  L  L ++ LS C +L+  P++  ++K                       
Sbjct: 580 NIEHLWYGMQELVNLEAIDLSECKQLRHLPDLSGALK----------------------- 616

Query: 639 KLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQ--IESLEELDISG- 695
            L+ L LS C+ L  L  S  +  +L TL L  C KLE++   +G+  + SL+   + G 
Sbjct: 617 -LKQLRLSGCEELCELRPSAFSKDTLHTLLLDRCIKLESL---MGEKHLTSLKYFSVKGC 672

Query: 696 -TAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCS 754
                 S S  S   ++L +  + +  PS+  + +LR LNL D NL    LP ++ +L S
Sbjct: 673 KNLKEFSLSSDSIKGLDLSKTGIEILHPSIGDMNNLRLLNLEDLNLTN--LPIELSHLRS 730

Query: 755 LKELYLS 761
           L EL +S
Sbjct: 731 LTELRVS 737


>gi|297837791|ref|XP_002886777.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332618|gb|EFH63036.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1023

 Score =  281 bits (720), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 225/708 (31%), Positives = 349/708 (49%), Gaps = 94/708 (13%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLD-----NVREISSKGG------ 64
           S +VRM+GI G  G+GKTTIAR +++ ++  F  S F+D        +I SK        
Sbjct: 208 SEEVRMVGIWGPSGIGKTTIARALFNRLARHFRGSIFIDRSFLCKSTKIYSKANPDDYNM 267

Query: 65  LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNRE 124
            + LQ   L ++L      I    D +  +  RL+ +KVL+++DD+ D   L +L G  +
Sbjct: 268 RLHLQSNFLPEILGQKHIRI----DHLGAVRERLKHQKVLILLDDLDDQVVLDTLVGQTQ 323

Query: 125 WFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDE-ALQLFNMKAFKTYQPLQECVQLS 183
           WFG GSRII+ ++++HLL+ HG+   Y+  GL  D+ AL++F+  AF+   PL   ++ S
Sbjct: 324 WFGRGSRIIVITKNKHLLRAHGICSFYEV-GLPSDQLALEMFSRYAFRQNCPLPGFIEFS 382

Query: 184 ARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL-QELE 242
             + +  G LPL L +LGS+L GR  ++W   L RL      +I + L++ ++GL    +
Sbjct: 383 VEVAKLVGNLPLGLNILGSYLRGRIKEDWIHRLHRLRKGLNKQIEEALRVEYEGLGSRKD 442

Query: 243 KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELG 302
           K IF  IAC F   + + +   LE      + G+  L++  LI     T+ MH L+QE+G
Sbjct: 443 KAIFRHIACLFNEVEINDIKLLLEDSDLDVITGLHNLLDNSLIHERRKTVQMHCLVQEMG 502

Query: 303 QQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAF 362
           +++V+ QS +   KR  L   +++  VL  +   E V+GI   N    +E+++    +AF
Sbjct: 503 KEMVRIQS-KNPAKREFLVDSKDIYDVLNGNANAEKVKGISW-NLADLDELHI--HKRAF 558

Query: 363 SKMTNLRLLKICN----------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
            +M NL  ++I +          L  P GL+YL  +LR L W GYP++ LPSN   +  +
Sbjct: 559 ERMKNLDFIRIYDDSLALHIQEKLHFPQGLDYLPPKLRFLSWDGYPMRCLPSNFLPEHLV 618

Query: 413 EIYMCYSRIGELWKGIKHLDK-LKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI 471
            + M  S++ +LW G+ HL + L+ M +  S NL  +PD + APNL  L L  C  L EI
Sbjct: 619 VLRMRNSKLEKLWNGV-HLPRLLEDMDMEGSSNLTELPDLSWAPNLTTLNLRNCPSLAEI 677

Query: 472 HPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDL 531
             S++  + L  L ++DCTSL++LP  I + SL +                  LD+SG  
Sbjct: 678 PSSIMNLHCLKTLTLEDCTSLVSLPVNIDLISLYR------------------LDLSGCS 719

Query: 532 KFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
           +F  FP+I     ++S L L  TAI  +P  I     L+ + +  C  L+ +   +S LK
Sbjct: 720 RFSRFPDI---SRNISFLILNQTAIEEVPWWINKFPKLICIEMWECTKLKYISGNISELK 776

Query: 592 CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
            L     S C  L K   I R+           T +  V  +                N 
Sbjct: 777 LLEKADFSNCEALTKASWIGRT-----------TVVAMVAEN----------------NH 809

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVP 699
            +LP           LN   CFKL+   ETL Q    + L + G  VP
Sbjct: 810 TKLP----------VLNFINCFKLDQ--ETLIQQSVFKHLILPGEKVP 845



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 142/312 (45%), Gaps = 32/312 (10%)

Query: 620 LFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVP 679
           L +  + ++++ + + L   LE +++    NL  LP    A  +L TLNL  C  L  +P
Sbjct: 620 LRMRNSKLEKLWNGVHLPRLLEDMDMEGSSNLTELPDLSWA-PNLTTLNLRNCPSLAEIP 678

Query: 680 ETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCN 739
            ++  +  L+ L +        TS  S +P+N+              L SL +L+L+ C+
Sbjct: 679 SSIMNLHCLKTLTLEDC-----TSLVS-LPVNI-------------DLISLYRLDLSGCS 719

Query: 740 LMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
                 P DI    S   L L++ +   +P  I    KL+ IE+ +C +L+ +      +
Sbjct: 720 RF-SRFP-DISRNISF--LILNQTAIEEVPWWINKFPKLICIEMWECTKLKYISGNISEL 775

Query: 800 RQVRVNGCASLVTLLDALKLCKSDS-TMIACLDSLKL-LGNKSLAFSMLREYLEAVSNTR 857
           + +     ++   L  A  + ++    M+A  +  KL + N    F + +E L   S   
Sbjct: 776 KLLEKADFSNCEALTKASWIGRTTVVAMVAENNHTKLPVLNFINCFKLDQETLIQQS-VF 834

Query: 858 QHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCF 917
           +HL  ++PG ++P +F  Q  G+S+ +    + ++ ++ + + +C V    K +R  N  
Sbjct: 835 KHL--ILPGEKVPSYFTNQATGNSLVIHLLQSSFS-QEFLRFRVCLVVDADKPNRSEN-- 889

Query: 918 GSYPTHQLNCHI 929
           GS  +  ++CH 
Sbjct: 890 GSIASTWVSCHF 901


>gi|359806248|ref|NP_001241468.1| TMV resistance protein N-like [Glycine max]
 gi|223452617|gb|ACM89635.1| disease-resistance protein [Glycine max]
          Length = 563

 Score =  281 bits (720), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 144/323 (44%), Positives = 213/323 (65%)

Query: 12  MDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQ 71
           + S + +VR++GICGMGG+GKTT A V+YD IS++F+A  F++NV +I   GG  ++Q+Q
Sbjct: 235 LSSNNDNVRVLGICGMGGIGKTTQAVVLYDRISYKFDACCFVENVNKIYRDGGATAIQKQ 294

Query: 72  LLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSR 131
           ++ Q L   +  I++ F+   ++ +RL   KVL+ +D+V  ++QLQ LA N  +   GSR
Sbjct: 295 IVRQTLDEKNLEIYSPFEISGIVRNRLHNIKVLIFLDNVDQIEQLQELAINPNFLFEGSR 354

Query: 132 IIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAG 191
           +II +RDEH+LK +G   ++K   +N ++A +LF  KAFK+      CV+L   +++Y  
Sbjct: 355 MIIITRDEHILKVYGAHVIHKVSLMNDNDARKLFYSKAFKSEDQSSSCVELIPEVLKYVQ 414

Query: 192 GLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIAC 251
            LPLA++V+GSFL  R+  +W+  L+R +  P + I+D+LQIS DGLQ  EK+IFL IAC
Sbjct: 415 CLPLAIKVIGSFLCTRNATQWKDALDRFQNSPDNGIMDVLQISIDGLQYEEKEIFLHIAC 474

Query: 252 FFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSP 311
           FFK    DY    L  CG H  IGI  LIEK LIT+ +  + MHD+LQELG++IV+ Q P
Sbjct: 475 FFKEEMEDYAKRILNCCGLHTHIGIPRLIEKSLITLRDQEIHMHDMLQELGKKIVRNQFP 534

Query: 312 EELGKRSRLWKEEEVCHVLTEST 334
           E+ G  SR+W  E+   V+T  T
Sbjct: 535 EQPGSWSRIWLYEDFFRVMTTQT 557


>gi|13509209|emb|CAC35323.1| Ngc-A protein [Linum usitatissimum]
          Length = 1075

 Score =  281 bits (720), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 259/898 (28%), Positives = 416/898 (46%), Gaps = 152/898 (16%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +D   +++  L++  S+  ++IGI GMG LGKTT+A  VY+ +S +FE   FLDN+RE  
Sbjct: 214  IDFSVDEMVKLLNLDSTSEKIIGIYGMGRLGKTTLATAVYNKVSMQFERCCFLDNIRETL 273

Query: 61   SKG-GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
             K  G+V+LQ +++S +L+       N  DG+ M+  R+ R K+ +V+DDV +  +   +
Sbjct: 274  LKNDGVVALQNKVISDILRKDFCQAKNASDGVQMIRERVSRHKIFVVLDDVNESFRFDDI 333

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
             G    F + SR ++T+RD   L+     +++K  G+++D +L+LF+  AF    P ++ 
Sbjct: 334  FGKLTAFSADSRFLVTTRDARTLERLRGCKLFKHEGMSHDHSLKLFSKHAFGVDYPPEDY 393

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
              L    ++   GLPLAL+V+GS L       W+  L  L+  P   +   L+IS++ L 
Sbjct: 394  ASLCEEFVQVGSGLPLALKVIGSLLFRTEKSFWKDKLIELKAIPAVNVQYRLKISYNELT 453

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWMHDLL 298
            + EK+IFLD+AC F G  ++        CGF+P   IR L+++ L+ +++N   WMHD +
Sbjct: 454  DNEKQIFLDVACLFVGAKKEIPIYMWSDCGFYPTTTIRTLVQRSLVRINDNEEFWMHDHI 513

Query: 299  QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
            ++LG+ IV  +S + L KRSR+W   +   +L    G + VE + +D            +
Sbjct: 514  RDLGRAIVCEES-QNLYKRSRIWSNNDAIDILKNREGNDCVEALRVDMRGEG----FALT 568

Query: 359  AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
             + F + + LR L++ N  L    + +   LR L  R Y     PS L ++K + + +  
Sbjct: 569  NEEFKQFSRLRFLEVLNGDLSGNFKNVLPSLRWL--RVYHGDPCPSGLNLNKLMILELEV 626

Query: 419  SRIGELWKG---IKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
            S + + W+G   IK   KLKV+ L   + L ++PD +    LE L    C R        
Sbjct: 627  SDVTDSWEGWNEIKAAGKLKVVHLMCCKGLEKVPDLSTCRGLELLRFSICRR-------- 678

Query: 476  LLHNKLIILNMKD------------------------------CTSLITLPGKI-LMKSL 504
             +H +L I N KD                               + LI +P  I  + SL
Sbjct: 679  -MHGELDIRNFKDLKVLDIFQTRITALKGEVESLQNLQQLDVGSSGLIEVPAGISKLSSL 737

Query: 505  EKLNLKSLP-----TTISGLK--------------CLSTLDVSGDLKFREFPEIVEHMEH 545
            E LNL ++      T  +GLK               L  LDV      R  P +   + +
Sbjct: 738  EYLNLTNIKHDKVETLPNGLKILLISSFSLSALPSSLFRLDVRYSTNLRRLPNLAS-VTN 796

Query: 546  LSELHLEGTAIRGLPLSIEL-------------------LSGLVLLN---LKNCRSLEIL 583
            L+ L LE   I G+P   EL                   L  LVLL    ++ CR LE L
Sbjct: 797  LTRLRLEEVGIHGIPGLGELKLLECLFLRDAPNLDNLDGLENLVLLKELAVERCRILEKL 856

Query: 584  P----------------------VTVSNL-KCLRSLKLSGCSKLKKFPEIVRSMKDLSEL 620
            P                        ++NL + L  L++SGC  L    E + S+ +L  L
Sbjct: 857  PSLAELTKLHKLVIGQCNILGEIYGLANLGESLSHLEISGCPCL-TVVESLHSLLNLGTL 915

Query: 621  FLDGTSIKEV-PSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVP 679
             L G  I  + P S+ + TKL+ L +SD +    LP  +  LK+L+ L + GC   +N  
Sbjct: 916  ELSGYGITNILPPSLSIYTKLKSLKVSDSQ----LP-DLTNLKNLRCLKICGC---DNFI 967

Query: 680  ETLG--QIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTD 737
            E  G   +ESLEEL + G+++                     +   L+GL  L  L    
Sbjct: 968  EITGLHTLESLEELRVMGSSI---------------------RKLDLTGLVKLEILQFDS 1006

Query: 738  CNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQL 795
            C  +       +G L SL+ L++S+   +    +++ L  L  I LE C+ L+ + +L
Sbjct: 1007 CTQLTEI--RGLGGLESLQRLHMSRCQSIKELPNLSGLKILSYIILEKCRHLKEVYRL 1062


>gi|296085626|emb|CBI29415.3| unnamed protein product [Vitis vinifera]
          Length = 413

 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 152/344 (44%), Positives = 221/344 (64%), Gaps = 1/344 (0%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MDS  +K+   +   S+DVRM+GICG+GG+GKTTIA  +Y+ IS  FE   FL+ V+E+ 
Sbjct: 63  MDSHFKKISLGLSMESNDVRMVGICGLGGIGKTTIASYIYNQISWGFECCSFLEKVKEVY 122

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
              GL+ LQ QLL+ +L+ A+  I N+  G  ++ + L  +K L+V DDV D+ QL+ L 
Sbjct: 123 KNKGLLGLQNQLLNDILEGANQKISNIHRGAHVIKNNLSLQKALIVFDDVDDMDQLEFLV 182

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           GN  W+G GSRIIIT+RD+  L    VD +Y   GLN +EAL+LF+  AF++  P ++  
Sbjct: 183 GNHAWYGKGSRIIITTRDKQCLTMPNVDYLYNVEGLNSNEALELFSRYAFRSNLPKEDFE 242

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
            L    I Y  GLPLAL+VLGS L G++  EW+S L +LE EP  +I  +L+ISFDGL  
Sbjct: 243 NLLDHAIHYCEGLPLALKVLGSLLCGKTKGEWKSELHKLEKEPEMKIQSVLKISFDGLDT 302

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            ++ I LDIACFF+G D+D+ +   +G   +  I IRVL E+CLIT+ NN L MH L+++
Sbjct: 303 TQQMILLDIACFFQGEDKDFASKIWDGYELYGEINIRVLSERCLITISNNRLHMHGLIEK 362

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEV-CHVLTESTGTELVEGIV 343
           + ++IV+ Q P++  K SRLW  +++ C  ++E      +  I 
Sbjct: 363 MCKKIVREQHPKDTSKWSRLWNPDDIYCAFVSEEVRINYLNSIA 406


>gi|298205200|emb|CBI17259.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 156/333 (46%), Positives = 230/333 (69%), Gaps = 4/333 (1%)

Query: 1   MDSRCEKL-RFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           MDS  E++ R L     +DVR+IGICG+GG+GKTTIA+VVY+  SHEFE   FL+NVRE+
Sbjct: 57  MDSHVEEIIRRLCVDQLNDVRIIGICGIGGMGKTTIAKVVYNTFSHEFEYMSFLENVREV 116

Query: 60  SSKGGLVSLQRQLLSQLLKLADN-SIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            +  GL  LQ Q+L  LL++  N ++ N+  G +M+ + L+ K+V +V+DD+ D  QL+ 
Sbjct: 117 GNTIGLHHLQNQILCDLLQVERNQNVSNISQGANMIKNVLRCKRVFIVLDDIDDSNQLEH 176

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           L  NR+W G GSR+IIT+R++HLL+   +D++Y+   LN  +A +LF++ AF+   P Q+
Sbjct: 177 LLRNRDWLGRGSRVIITTRNKHLLQE--MDDIYEVEELNSKQARELFSLFAFRQNLPKQD 234

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
            + LS R++RY  GLPLAL+VLGSFL  +++ EW S L +L+ EP  +I ++L++SFDGL
Sbjct: 235 FIHLSDRVVRYCHGLPLALKVLGSFLFDKTIFEWESQLHKLKREPEVKIHNVLKVSFDGL 294

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
              +KK FLDIACFF   D+DYV+  L+ C  +  I I+VL +KCLI++  N + MHDL+
Sbjct: 295 DYTQKKTFLDIACFFNEEDKDYVSRILDSCDLNAKIEIKVLCDKCLISLSKNKILMHDLI 354

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLT 331
           QE+G  I++ +SP++  K SRLW   +V    T
Sbjct: 355 QEMGWNIIRSESPDDPTKWSRLWDPSDVRRAFT 387


>gi|227438171|gb|ACP30575.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1609

 Score =  281 bits (719), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 237/719 (32%), Positives = 346/719 (48%), Gaps = 79/719 (10%)

Query: 3    SRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV-----R 57
            +R  K++ ++   + DV++IGI G  G+GKTT ARV+YD +S EF+ S FL+N+     R
Sbjct: 410  ARVTKMKTMLSLQAKDVKVIGIWGPAGIGKTTAARVLYDQVSPEFQFSTFLENIKGCFKR 469

Query: 58   EISSKGGL-VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQL 116
               +   L +  Q +LLSQ+    D     V   +     +L  +KVL+V+D+V    QL
Sbjct: 470  SFGNDHQLKLRFQEKLLSQIFNQKDI----VVRHLGGAPQKLSDQKVLVVLDEVDSWWQL 525

Query: 117  QSLAGNREWFGSGSRIIITSRDEHLLKTHGVD--EVYKPHGLNYDEALQLFNMKAFKTYQ 174
            + +A NR WFG GS +IIT+ D  LLK  G++  ++YK      DEALQ+  + AF    
Sbjct: 526  EEVA-NRAWFGRGSMVIITTEDRKLLKALGLEANQIYKMKFPTTDEALQILCLYAFGQKF 584

Query: 175  PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
            P  +   L+  +   AG LPL L V+GS+L G S  EW   L  L     SEI   L++S
Sbjct: 585  PNYDFETLAWEVTELAGNLPLGLRVMGSYLRGMSKKEWIDALPSLRSSLDSEIESTLKLS 644

Query: 235  FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
            ++ L   EK +FL IACFF G   D V + LE    +   G++ L  + LI   N  + M
Sbjct: 645  YNVLSNKEKSLFLHIACFFAGFKVDRVKSILEKSDLNVNHGLQTLAYRSLIYRENGYVEM 704

Query: 295  HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
            H LLQ++G++I                             GT  V GI L     E    
Sbjct: 705  HSLLQQMGKEI-----------------------------GTGTVLGIKLLKLEGEE--- 732

Query: 355  LCASAKAFSKMTNLRLLKI--CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTI 412
            +  S  AF  + NL+ L I    L  P GL  L N+LR + W+  PL+F PS       +
Sbjct: 733  IKISKSAFQGIRNLQFLDIDGGTLNTPEGLNCLPNKLRYIHWKQSPLRFWPSKFSEKLLV 792

Query: 413  EIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIH 472
            E+ M  S   +LW+GIK    LK M LS SE L  +PD + A +LE L L  C  L E+ 
Sbjct: 793  ELIMPNSNFEKLWEGIKPFPCLKRMDLSSSEYLKEIPDLSKATSLEILDLHYCRSLLELP 852

Query: 473  PSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKS-------LPTTISGLKCLSTL 525
             S+     L  L++  C SL  L G     SL++L+L         LP+++S   C   L
Sbjct: 853  SSIGRLINLEKLDLHYCRSLEKLSG---CSSLKELDLSDSGIGALELPSSVSTWSCFYRL 909

Query: 526  DVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPV 585
            ++SG    ++FP++      + EL L GT I  +P  IE L  L  L +  CR+LEI+  
Sbjct: 910  NMSGLSDLKKFPKVP---YSIVELVLSGTGIEEVPPWIENLFRLQQLIMFGCRNLEIVSP 966

Query: 586  TVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL---DGTSIKEVPSSIEL------ 636
             +S L+ L+++ L    K    PE+    +  + + +   D   I    S + +      
Sbjct: 967  NISKLENLQTIAL---CKHDDVPEMSYGDEVFTAVIVGGPDSHGIWRFRSDLNVHYILPI 1023

Query: 637  ------LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLE 689
                  LT    L+L     L  +P  I  L  L  L+++GC  L  +P+  G   SL+
Sbjct: 1024 CLPKKALTSPISLHLFS-GGLKTIPDCIRRLSGLSELSITGCIILTELPQLPGSCLSLD 1081



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 169/404 (41%), Gaps = 65/404 (16%)

Query: 434  LKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLI 493
            +K++ L   E  I    F G  NL+ L ++G T L        L NKL  ++ K  + L 
Sbjct: 723  IKLLKLEGEEIKISKSAFQGIRNLQFLDIDGGT-LNTPEGLNCLPNKLRYIHWKQ-SPLR 780

Query: 494  TLPGKILMKSLEKL-----NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHME-HLS 547
              P K   K L +L     N + L   I    CL  +D+S     +E P++ +     + 
Sbjct: 781  FWPSKFSEKLLVELIMPNSNFEKLWEGIKPFPCLKRMDLSSSEYLKEIPDLSKATSLEIL 840

Query: 548  ELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEIL---------------------PVT 586
            +LH   + +  LP SI  L  L  L+L  CRSLE L                     P +
Sbjct: 841  DLHYCRSLLE-LPSSIGRLINLEKLDLHYCRSLEKLSGCSSLKELDLSDSGIGALELPSS 899

Query: 587  VSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLS 646
            VS   C   L +SG S LKKFP++  S   + EL L GT I+EVP  IE L +L+ L + 
Sbjct: 900  VSTWSCFYRLNMSGLSDLKKFPKVPYS---IVELVLSGTGIEEVPPWIENLFRLQQLIMF 956

Query: 647  DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYS 706
             C+NL  +  +I  L++L+T+ L    K ++VPE     E    + + G           
Sbjct: 957  GCRNLEIVSPNISKLENLQTIALC---KHDDVPEMSYGDEVFTAVIVGG----------- 1002

Query: 707  YIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFV 766
                           P   G+   R  +L    ++   LP     L S   L+L      
Sbjct: 1003 ---------------PDSHGIWRFRS-DLNVHYILPICLPKKA--LTSPISLHLFSGGLK 1044

Query: 767  SLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
            ++P  I  LS L  + +  C  L  LPQLP +   +  + C SL
Sbjct: 1045 TIPDCIRRLSGLSELSITGCIILTELPQLPGSCLSLDAHFCRSL 1088


>gi|359493386|ref|XP_003634582.1| PREDICTED: uncharacterized protein LOC100256836 [Vitis vinifera]
          Length = 1239

 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 147/303 (48%), Positives = 210/303 (69%), Gaps = 1/303 (0%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD   ++++ L+DS S+ V M+GI G GG+GKTTIA+VVY+ +  +F+   FL+NVRE S
Sbjct: 201 MDENSKEVKLLIDSQSNKVSMVGIYGTGGIGKTTIAKVVYNGLLDQFKRHSFLENVREKS 260

Query: 61  SKG-GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
               GL+ LQ++LL  +L   D+ I N+ +GI  + S+   +KVL+++DDV  ++QL+ L
Sbjct: 261 KDDPGLLELQKKLLYDILMEKDSKISNIGEGIKEIKSKCCFEKVLIILDDVDCLRQLEFL 320

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
           A N E F  GS II+T+R++  L  H     Y+  GL +++A +LF   AFK + P    
Sbjct: 321 APNSECFHRGSIIIVTTRNKRCLDVHKSYSSYEAKGLAHEQAKELFCWNAFKQHHPKDNY 380

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           V LS RI+ YA GLPLAL VLGSFL  R VDEW STL +L+  P  +I ++LQIS+DGL 
Sbjct: 381 VDLSNRILDYAKGLPLALVVLGSFLYKRGVDEWESTLHKLKTTPFKDIQNVLQISYDGLD 440

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           ++ KK+FLDIACFFK +++++VT+ LEGC  HP IG++VL E+CLI++   T+ MHDLLQ
Sbjct: 441 DICKKLFLDIACFFKDHNKEFVTSILEGCDLHPKIGLKVLDERCLISILGGTIRMHDLLQ 500

Query: 300 ELG 302
           E+G
Sbjct: 501 EMG 503


>gi|357499375|ref|XP_003619976.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494991|gb|AES76194.1| Disease resistance-like protein [Medicago truncatula]
          Length = 681

 Score =  280 bits (716), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 195/572 (34%), Positives = 307/572 (53%), Gaps = 88/572 (15%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + SR  ++  L++ G  D V M+GI G+GG+GK+T+AR +Y+LI  +FE+  FL NVRE 
Sbjct: 193 LQSRLLQVNSLLNIGYDDGVCMVGIYGIGGIGKSTLARAIYNLIGDQFESLCFLHNVREN 252

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           ++K GL +LQ +LLS+ + LA   + +V +GI ++  RL++KKV+L++DDV ++KQLQ++
Sbjct: 253 ATKHGLQNLQEKLLSETVGLAI-KLGHVSEGIPIIQQRLRQKKVILILDDVDELKQLQAI 311

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G   W G GS++I+T+RD+HLL  HG++ +Y   GL  +EAL+LF   AFK+ +     
Sbjct: 312 IGEPNWLGHGSKVIVTTRDKHLLSCHGIERIYVVDGLKEEEALELFRWMAFKSNK----- 366

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
                        +   LEV+GS L G+ + EW STL + E  P   +  IL++SFD L 
Sbjct: 367 -------------IEPTLEVVGSHLFGKCIAEWESTLAKYERIPHGHVQKILRVSFDCLD 413

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIG-IRVLIEKCLITVHNNT-LWMHDL 297
           E E+ +FLDI C F G     V + L     H +   + VL+ K LI +  +T + +HDL
Sbjct: 414 EEEQSVFLDITCCFNGCRLAEVEDKLHAHYGHCIKNHVGVLVNKSLIKIIRSTVVRLHDL 473

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           ++++G++IV+++S +E G+R+RLW ++++ HVL E+T T  +E I L+      EV    
Sbjct: 474 IEDMGKEIVRQESVKEAGERTRLWFDKDIVHVLKENTETSKIEMIYLNG--PSIEVLRDW 531

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
           + KAF KM NL+ L I +     G  Y  + LR+L W+ YP + +P N+           
Sbjct: 532 NGKAFKKMKNLKTLIIKSGHFSKGSRYFPSSLRVLEWQRYPSECIPFNV----------- 580

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLL 477
                                             +  PNLE +    C  L  +H S+  
Sbjct: 581 ----------------------------------SCLPNLENISFTNCVNLITVHNSIGF 606

Query: 478 HNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFP 537
            NKL IL+ + C  L + P                P  ++ LK    L++S     R FP
Sbjct: 607 LNKLEILSAQSCVKLTSFP----------------PLQLTSLK---ILNLSHCKSLRSFP 647

Query: 538 EIVEHMEHLSELHLEGTAIRGLPLSIELLSGL 569
           +I+  ME++  + +  T I G P+S + L+GL
Sbjct: 648 DILCKMENIQNIQICETLIEGFPVSFQNLTGL 679


>gi|449530525|ref|XP_004172245.1| PREDICTED: TMV resistance protein N-like, partial [Cucumis sativus]
          Length = 623

 Score =  280 bits (716), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 178/467 (38%), Positives = 273/467 (58%), Gaps = 11/467 (2%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK-GGLVSLQRQLLS 74
           S+ + M G+ G+GG+GKTTIA+ +Y+ I+ EFE   FL N+RE S++ GGLV  Q++LL 
Sbjct: 157 SNGITMFGLYGVGGMGKTTIAKALYNKIADEFEGCCFLSNIREASNQYGGLVQFQKELLC 216

Query: 75  QLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIII 134
           ++L      + N+  GI ++ +RL  KK+LL++DDV   +QLQ+LAG  +WFG GS++I 
Sbjct: 217 EILMDDSIKVSNLPRGITIIRNRLYSKKILLILDDVDTREQLQALAGGHDWFGHGSKVIA 276

Query: 135 TSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLP 194
           T+R++ LL THG D++    GL+YDEAL+LF+   F+   PL   ++LS R + Y  GLP
Sbjct: 277 TTRNKQLLVTHGFDKMQNVGGLDYDEALELFSWHCFRNSHPLNVYLELSKRAVDYCKGLP 336

Query: 195 LALEVLGSFL-SGRSVDEWRSTLERLEIEP-PSEILDILQISFDGLQELEKKIFLDIACF 252
           LALEVLGSFL S      ++  L+  E      +I D L+IS+DGL++  K+IF  I+C 
Sbjct: 337 LALEVLGSFLHSIGDPSNFKRILDEYEKHYLDKDIQDSLRISYDGLEDEVKEIFCYISCC 396

Query: 253 FKGNDRDYVTNFLEGCGFHPV-IGIRVLIEKCLITVHN-NTLWMHDLLQELGQQIVQRQS 310
           F   D   V   LE CG   +  GI  L+   L+T+   N + MH+++Q++G+ I   ++
Sbjct: 397 FVREDICKVKMMLEACGCLCLEKGITKLMNLSLLTIGRFNRVEMHNIIQQMGRTIHLSET 456

Query: 311 PEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRL 370
            +   KR RL  +++   VL  +     V+ I L+         L   ++AF K+ NL +
Sbjct: 457 SKS-HKRKRLLIKDDAMDVLNGNKEARAVKVIKLN---FPKPTKLDIDSRAFDKVKNLVV 512

Query: 371 LKICNLQLPNG--LEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGI 428
           L++ N        LEYL + LR + W  +P   LP+   M+  IE+ + YS I    +G 
Sbjct: 513 LEVGNATSSESSTLEYLPSSLRWMNWPQFPFSSLPTTYTMENLIELKLPYSSIKHFGQGY 572

Query: 429 KHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
              ++LK + LS S  L+ +PD + A NL+ L L GC  L ++H S+
Sbjct: 573 MSCERLKEINLSDSNLLVEIPDLSTAINLKYLNLVGCENLVKVHESI 619


>gi|297825395|ref|XP_002880580.1| hypothetical protein ARALYDRAFT_320248 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326419|gb|EFH56839.1| hypothetical protein ARALYDRAFT_320248 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1067

 Score =  280 bits (715), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 228/719 (31%), Positives = 353/719 (49%), Gaps = 84/719 (11%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M+ R ++L   +D   +D ++IG+ GM G+GKTT+A ++++    +F +     ++ + S
Sbjct: 183 MEQRMKQLENKLDFDGNDTQIIGVVGMPGIGKTTLAMMLHEKWKRKFISCVTYLDISKNS 242

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDM--LGSRLQRKKVLLVIDDVVDVKQLQS 118
                V L+R LL  LLK     + ++ D      +   L + K+  ++DDV D +QL+ 
Sbjct: 243 EDDRPVQLRRTLLEDLLK---GKVPDIGDETTHGSVKVALLKTKIFAILDDVSDKRQLEF 299

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAF--KTYQPL 176
           L G  +W   GS+IIIT+ D+ LL+    D+ Y    LN   ALQLF+  AF  + +   
Sbjct: 300 LLGELDWIKKGSKIIITTCDKSLLEGFA-DDTYVVPKLNDRVALQLFSYHAFHGQNFNFT 358

Query: 177 QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
              + LS   + YA G PL L++LG  L  +    W   LE L  +              
Sbjct: 359 SSLLTLSRMFVDYARGHPLTLKLLGRELYEKDEVHWAPILEMLTKQ-------------- 404

Query: 237 GLQELEKKIFLDIACFFKGNDRDYVTNFLEGC---GFHPVIGIRVLIEKCLITVHNNTLW 293
                  ++F    CFFK  D  +V + L+       + V  ++ L+ K LIT+    + 
Sbjct: 405 -----SNRMFQ--VCFFKSEDEYFVRSLLDSGDPDSTNAVSEVKDLVNKFLITIAGGRVE 457

Query: 294 MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTE--STGTELVEGIVLDNYHHEN 351
           M+  L    + +    SP  L    RLW  E++ + L +   +   +V GI LD      
Sbjct: 458 MNVPLYTFSKDL---GSPRWL----RLWNYEDIINKLMKMKKSDANIVRGIFLDTSKLTK 510

Query: 352 EVYLCASAKAFSKMTNLRLLKI------------CNLQLPNGLEYLSNRLRLLGWRGYPL 399
              +C     F  M NLR +KI            C L  P+GLE+    +R L W  +PL
Sbjct: 511 S--MCLDILTFIDMRNLRYMKIYDSCCPRQCNAECKLNFPDGLEFPLGEVRYLHWVKFPL 568

Query: 400 KFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEK 459
           + LP + + +  +++ + YS+I  +W+G K   +LK + LSHS  L+ +   + A NL++
Sbjct: 569 EELPPDFRPENLVDLRLPYSKITRVWEGEKDTPRLKWVDLSHSSELLDLSALSKAENLQR 628

Query: 460 LILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGL 519
           L LEGCT L E    +     L+ LN++ C  L +LP         ++NL SL T I   
Sbjct: 629 LNLEGCTSLDEFPLEIQNMKSLVFLNLRGCIRLCSLP---------EVNLISLKTLI--- 676

Query: 520 KCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRS 579
                  +S      EF  I E +E L   HL+GTAI+GLP +I+ L  LV+LNLKNC+ 
Sbjct: 677 -------LSDCSNLEEFQLISESVEFL---HLDGTAIKGLPQAIQKLQRLVVLNLKNCKM 726

Query: 580 LEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTK 639
           L  LP  + NLK L  L LSGCS+LK  P++  S+K L  L  DGT  KE+P SI   T 
Sbjct: 727 LACLPNCLGNLKALDKLILSGCSRLKNLPDVRNSLKHLHTLLFDGTGAKEMP-SISCFTG 785

Query: 640 LE-----LLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDI 693
            E      + L    ++   P ++  + SL+ L LSG   +   P+ +G++ +L+ LD+
Sbjct: 786 SEGPASADMFLQTLGSMTEWPCAVNRVSSLRHLCLSGNDFVSLQPD-IGKLYNLKWLDV 843



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 185/380 (48%), Gaps = 45/380 (11%)

Query: 544 EHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
           E+L  L+LEG T++   PL I+ +  LV LNL+ C  L  LP    NL  L++L LS CS
Sbjct: 624 ENLQRLNLEGCTSLDEFPLEIQNMKSLVFLNLRGCIRLCSLPEV--NLISLKTLILSDCS 681

Query: 603 KLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALK 662
            L++F  I  S++    L LDGT+IK +P +I+ L +L +LNL +CK L  LP+ +  LK
Sbjct: 682 NLEEFQLISESVE---FLHLDGTAIKGLPQAIQKLQRLVVLNLKNCKMLACLPNCLGNLK 738

Query: 663 SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLP 722
           +L  L LSGC +L+N+P+    ++ L  L   GT                     A ++P
Sbjct: 739 ALDKLILSGCSRLKNLPDVRNSLKHLHTLLFDGTG--------------------AKEMP 778

Query: 723 SLSGLCSLRKLNLTDCNLME-GAL---PSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
           S+S           D  L   G++   P  +  + SL+ L LS N FVSL   I  L  L
Sbjct: 779 SISCFTGSEGPASADMFLQTLGSMTEWPCAVNRVSSLRHLCLSGNDFVSLQPDIGKLYNL 838

Query: 779 LNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLC------KSDSTMIACLDS 832
             ++++ C +L+S+P LPP ++    +GC SL  + D +          +  +   C   
Sbjct: 839 KWLDVKHCTKLRSVPMLPPKLQYFDAHGCDSLKRVADPIAFSVLSDQIHATFSFTNCNKL 898

Query: 833 LKLLGNKSLAFSMLREYLEAVSNTRQHLSVV--------VPGSEIPEWFMYQNEGSSITV 884
            +   +  +++++ R  L     T+ +  +V         PG E+P WF +Q  GS +  
Sbjct: 899 DQDAKDSIISYTLRRSQLVRDELTQYNGGLVSEALIGTCFPGWEVPAWFSHQASGSVLKP 958

Query: 885 TRPSNLYNKKKLVGYAICCV 904
             P++ +   K  G  +C V
Sbjct: 959 KLPAH-WCDNKFTGIGLCAV 977



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 35/219 (15%)

Query: 604 LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
           L++ P   R  ++L +L L  + I  V    +   +L+ ++LS    L+ L S++   ++
Sbjct: 568 LEELPPDFRP-ENLVDLRLPYSKITRVWEGEKDTPRLKWVDLSHSSELLDL-SALSKAEN 625

Query: 664 LKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPS 723
           L+ LNL GC  L+  P  +  ++SL  L++ G                       ++L S
Sbjct: 626 LQRLNLEGCTSLDEFPLEIQNMKSLVFLNLRG----------------------CIRLCS 663

Query: 724 LS--GLCSLRKLNLTDC-NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLN 780
           L    L SL+ L L+DC NL E  L S+     S++ L+L   +   LP +I  L +L+ 
Sbjct: 664 LPEVNLISLKTLILSDCSNLEEFQLISE-----SVEFLHLDGTAIKGLPQAIQKLQRLVV 718

Query: 781 IELEDCKRLQSLPQLPPNIR---QVRVNGCASLVTLLDA 816
           + L++CK L  LP    N++   ++ ++GC+ L  L D 
Sbjct: 719 LNLKNCKMLACLPNCLGNLKALDKLILSGCSRLKNLPDV 757


>gi|297848192|ref|XP_002891977.1| hypothetical protein ARALYDRAFT_474812 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337819|gb|EFH68236.1| hypothetical protein ARALYDRAFT_474812 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 960

 Score =  280 bits (715), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 209/668 (31%), Positives = 339/668 (50%), Gaps = 86/668 (12%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +++   K+  L+D  +   +++GI G  G+GK+TIAR +++ +S  F+ + F+DN+ E S
Sbjct: 40  LEAHLRKMESLLDLDNDGAKIVGISGTAGIGKSTIARALHNALSTRFQHNCFMDNLHE-S 98

Query: 61  SKGGLVS------LQRQLLSQLLKLADNSIWNVFDGIDM-----LGSRLQRKKVLLVIDD 109
           +K GLV       LQ QLLS++L L         DGI +     +  RL  ++VL+++DD
Sbjct: 99  NKIGLVDYGLKLRLQEQLLSKILNL---------DGIKIGHSGVIQERLHDQRVLIILDD 149

Query: 110 VVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKA 169
           V  + QL++LA N  WFG GSR+I+T+ ++ +L+ HG+ ++Y     +  EAL +F + A
Sbjct: 150 VESLDQLEALA-NIMWFGPGSRVIVTTENKEILQQHGISDIYHVGFPSSREALMIFCLSA 208

Query: 170 FKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILD 229
           F+   P    + L+  + +  G LPLAL VLGS L G++  +W   L RL+      I  
Sbjct: 209 FRQISPPGGFMDLAVEVAKLCGNLPLALHVLGSSLRGKNYSDWIEELPRLQTCLDGRIES 268

Query: 230 ILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGC------GFHPVIGIRVLIEKC 283
           +L++ ++ L E ++ +FL IA FF     D+VT+ L         G   + G+++L  + 
Sbjct: 269 VLKVGYESLHEKDQALFLYIAVFFNYEHADHVTSMLAKTNLNVRPGLKILPGLKILANRH 328

Query: 284 LITVHNNT---LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVE 340
           LI + +     + MH LLQ + +Q++ +Q P    KR  L   +E+ +VL  + G   + 
Sbjct: 329 LIHIGHGAKGEVVMHRLLQVMARQVISKQEP---WKRQILVDNQEISYVLENAEGNGSIV 385

Query: 341 GIVLDNYHHENEV-YLCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRL 391
           GI  D      E+  L  SA+AF +M NL LLK+ +        L +P  +++L   L L
Sbjct: 386 GISFD----VGEINKLTLSARAFERMHNLFLLKVYDRWLTGKRQLHIPEEMDFLP-PLSL 440

Query: 392 LGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDF 451
           L W  Y  K LP     +  +E++M  S++ +LW G + L  L  M    S  L ++PD 
Sbjct: 441 LRWDAYQRKTLPRRFCPENLVELHMPDSQLEKLWDGTQPLLNLTKMNFRGSSCLKKLPDL 500

Query: 452 TGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNL-- 509
           + A NLE+L L  C  L E+  S+    KL  L    C SL  +P  I +  L+++ +  
Sbjct: 501 SNASNLERLDLYECIALVELPSSISNLRKLNYLETNLCRSLQVIPTLINLAFLKEIKMMG 560

Query: 510 -------KSLPTTISGLKCLST-----------------LDVSGDLKFREF----PEIVE 541
                    +PT I  L  + T                  D+SG +  + F    P +V 
Sbjct: 561 CSRLRSFPDIPTNIINLSVMETTVAEFPASLRHFSLLKSFDISGSVNLKTFSTHLPTVV- 619

Query: 542 HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGC 601
               ++ELHL+ + I  +   I  L  L +L L NC+ L+ LP   S+LK LR+   + C
Sbjct: 620 ----VTELHLDNSGIESITDCIRGLHNLRVLALSNCKKLKSLPKLPSSLKWLRA---NYC 672

Query: 602 SKLKKFPE 609
             L++  E
Sbjct: 673 ESLERVSE 680



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 166/369 (44%), Gaps = 50/369 (13%)

Query: 537 PEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSL 596
           PE ++ +  LS L  +    + LP        LV L++ + + LE L      L  L  +
Sbjct: 429 PEEMDFLPPLSLLRWDAYQRKTLPRRF-CPENLVELHMPDSQ-LEKLWDGTQPLLNLTKM 486

Query: 597 KLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
              G S LKK P++  +  +L  L L +  ++ E+PSSI  L KL  L  + C++L  +P
Sbjct: 487 NFRGSSCLKKLPDLSNA-SNLERLDLYECIALVELPSSISNLRKLNYLETNLCRSLQVIP 545

Query: 656 SSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRK 715
           + +I L  LK + + GC +L + P+    I +L  ++ +    P S   +S         
Sbjct: 546 T-LINLAFLKEIKMMGCSRLRSFPDIPTNIINLSVMETTVAEFPASLRHFSL-------- 596

Query: 716 SVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHL 775
              LK   +SG  +L+  +          LP+ +     + EL+L  +   S+   I  L
Sbjct: 597 ---LKSFDISGSVNLKTFST--------HLPTVV-----VTELHLDNSGIESITDCIRGL 640

Query: 776 SKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKL 835
             L  + L +CK+L+SLP+LP +++ +R N C SL  + + L    +D     C      
Sbjct: 641 HNLRVLALSNCKKLKSLPKLPSSLKWLRANYCESLERVSEPLNTPNADLDFSNCFK---- 696

Query: 836 LGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKK 895
           LG ++      + +++           ++PG ++P  F ++  G+S+T+   ++      
Sbjct: 697 LGRQARRAIFQQWFVDG--------RALLPGRKVPALFDHRARGNSLTIPNSAS------ 742

Query: 896 LVGYAICCV 904
              Y +C V
Sbjct: 743 ---YKVCVV 748


>gi|20260632|gb|AAM13214.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 672

 Score =  279 bits (714), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 181/492 (36%), Positives = 265/492 (53%), Gaps = 26/492 (5%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-----ISSKGGLVSLQRQLL 73
           VR++GICG  G+GKTTIAR +  L+S  F+ S F++NVR      +   G  + LQ +LL
Sbjct: 190 VRIVGICGPAGIGKTTIARALQSLLSSNFQRSCFMENVRGSLNIGLDEYGLKLDLQERLL 249

Query: 74  SQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRII 133
           S+++      I    + +  +  RL  +KVL+++DDV D+  L +LA    WFG GSRII
Sbjct: 250 SKIMNQKGMRI----EHLGTIRDRLHDQKVLIILDDVNDL-DLYALADQTTWFGPGSRII 304

Query: 134 ITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGL 193
           +T+ D  LL+ H ++ VY     +  EAL++F   AF+        ++L+ R+    G L
Sbjct: 305 VTTEDNELLQKHDINNVYHVDFPSRKEALEIFCRCAFRQSSAPDTILKLAERVTELCGNL 364

Query: 194 PLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFF 253
           PL L V+GS L G++ DEW   + RLEI    +    L++ +D L E E+ +FL IA FF
Sbjct: 365 PLGLCVIGSSLHGKTEDEWEILIRRLEISLDRDNEAQLRVGYDSLHENEQALFLSIAVFF 424

Query: 254 KGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV-HNNTLWMHDLLQELGQQIVQRQSPE 312
              DR  V   L         G+R L  K LI +  N  + MH+LLQ +G+Q +QRQ P 
Sbjct: 425 NYKDRQLVMAMLLDSNLDVEYGLRTLANKSLIHISRNEKIVMHNLLQHVGRQAIQRQEP- 483

Query: 313 ELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLK 372
              KR  L   +E+C+VL   T   +V GI  D      EV+L  S +AF ++ NL+ L+
Sbjct: 484 --WKRHILIDADEICNVLENDTDARIVSGISFD-ISRIGEVFL--SERAFKRLCNLQFLR 538

Query: 373 ICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGEL 424
           +          +++P  +E+   RLRLL W  YP + L   L ++  +E+ M  S + +L
Sbjct: 539 VFKTGYDEKNRVRIPENMEF-PPRLRLLQWEAYPRRSLSLKLNLEYLVELDMEGSLLEKL 597

Query: 425 WKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIIL 484
           W G + L  LK M LS S  L ++PD + A NLE+L L  C  L E+  S    +KL  L
Sbjct: 598 WDGTQPLANLKKMSLSSSWYLKKLPDLSNATNLEELDLRACQNLVELPSSFSYLHKLKYL 657

Query: 485 NMKDCTSLITLP 496
           NM  C  L  +P
Sbjct: 658 NMMGCRRLKEVP 669



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 68/163 (41%), Gaps = 27/163 (16%)

Query: 518 GLKCLSTLDVSGDLKFR-EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKN 576
            L+ L       D K R   PE +E    L  L  E    R L L + L   LV L+++ 
Sbjct: 533 NLQFLRVFKTGYDEKNRVRIPENMEFPPRLRLLQWEAYPRRSLSLKLNL-EYLVELDMEG 591

Query: 577 CRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIEL 636
              LE L      L  L+ + LS    LKK P++  +                       
Sbjct: 592 S-LLEKLWDGTQPLANLKKMSLSSSWYLKKLPDLSNA----------------------- 627

Query: 637 LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVP 679
            T LE L+L  C+NLV LPSS   L  LK LN+ GC +L+ VP
Sbjct: 628 -TNLEELDLRACQNLVELPSSFSYLHKLKYLNMMGCRRLKEVP 669


>gi|451798986|gb|AGF69191.1| TMV resistance protein N-like protein 5 [Vitis labrusca]
          Length = 587

 Score =  279 bits (713), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 167/377 (44%), Positives = 250/377 (66%), Gaps = 21/377 (5%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EKL+ LM++  + V ++GICG+GG+GKTTIA+ +Y+ IS++++ S FL N+RE  SKG +
Sbjct: 201 EKLKSLMNTNLNKVSVVGICGIGGVGKTTIAKAIYNEISYQYDGSSFLKNIRE-RSKGDI 259

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
           + LQ++LL  +LK  +  + N+ +GI M+   L   +VL++ DDV ++KQL+ LA  ++W
Sbjct: 260 LQLQQELLHGILKGKNFKVNNIDEGISMIKRCLSSNRVLVIFDDVDELKQLEYLAEEKDW 319

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSAR 185
           F + S IIITSRD+ +L  +GVD  Y+   LN  EA+++F++ AF+   P +    LS  
Sbjct: 320 FEAKSTIIITSRDKQVLAQYGVDISYEVSKLNKKEAIEVFSLWAFQHNLPKEVYKNLSYN 379

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           II YA GLPLAL+VLG  L G++  EW S L +L+  P  EI ++L+ISFDGL +++K I
Sbjct: 380 IIDYANGLPLALKVLGGSLFGKTRSEWESALCKLKTIPHMEIHNVLRISFDGLDDVDKGI 439

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQI 305
           FLD+ACFFKGND+DYV+  L   G +   GI  L ++CL+T+  N L MHDL+Q++G +I
Sbjct: 440 FLDVACFFKGNDKDYVSRIL---GPYAEYGITTLDDRCLLTISKNMLDMHDLIQQMGWEI 496

Query: 306 VQRQSPEELGKRSRLWKEEEVCHVLTES-----TGTELVEGIVLD----NYHHENEVYLC 356
           ++++  E LG+RSRLW + +  HVLT +      G + +EG+ LD    N  H N     
Sbjct: 497 IRQECLENLGRRSRLW-DSDAYHVLTRNMSYIFQGAQAIEGLFLDRCKFNPSHLNR---- 551

Query: 357 ASAKAFSKMTNLRLLKI 373
              ++F +M  LRLLKI
Sbjct: 552 ---ESFKEMNRLRLLKI 565


>gi|297833730|ref|XP_002884747.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330587|gb|EFH61006.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 975

 Score =  278 bits (712), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 206/671 (30%), Positives = 330/671 (49%), Gaps = 106/671 (15%)

Query: 7   KLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLV 66
           K+  L+   S  VRM+G+ G  G+GKTTIAR ++  IS  F++S F+D  R   SK   +
Sbjct: 193 KMSLLLCLESEQVRMVGLWGPSGIGKTTIARALFIRISRHFQSSVFID--RAFVSKTMEI 250

Query: 67  -------------SLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDV 113
                         LQ   LS++L   D  + +    +  +G RL+ KKVL+V+DD+ D 
Sbjct: 251 FRGANPDDYNMKLHLQENFLSEILNKKDIKVHH----LGAVGERLKHKKVLIVLDDLDDQ 306

Query: 114 KQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTY 173
             L +L G  +WFG GSRI++ ++D+HLL+ HG+D +YK    ++  AL++F   AF+  
Sbjct: 307 IVLDALVGGTQWFGCGSRILVITKDKHLLRAHGIDRIYKVGPPSHKLALEMFCQYAFRQN 366

Query: 174 QPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQI 233
            P +   +L++ + + AG LPLAL V G +L GR +++W   L RL   P  +I   L++
Sbjct: 367 SPREGFAELASEVTKGAGNLPLALNVFGLYLRGRDIEDWLDMLPRLRKGPYGKIEKALRV 426

Query: 234 SFDGLQELE-KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTL 292
           S+DGL   E K IF  IAC F G + + +   L        IG++ LI+  LI    +T+
Sbjct: 427 SYDGLGSKEDKAIFCHIACLFNGMEANDIKLLLADSDLEVNIGLKNLIDNSLIHERGSTV 486

Query: 293 WMHDLLQELGQQIVQRQS--PEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHE 350
            +H L+QE+G++I++ QS  P E   R  L   +++  V  +++G + V G+ L     +
Sbjct: 487 HIHCLVQEMGKEIIRTQSNKPRE---REFLVDSKDIGDVFNDTSGAKKVLGLSLSLAEFD 543

Query: 351 NEVYLCASAKAFSKMTNLRLLKI----------CNLQLPNGLEYLSNRLRLLGWRGYPLK 400
               L    +AF +M NLR L+I            L LP GL Y   +L+LL W GYP++
Sbjct: 544 K---LHIDKRAFKRMRNLRFLRIYEDSLDLHNQVRLHLPGGLSYFPPKLKLLCWDGYPMR 600

Query: 401 FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
            LP++ + +    + M  S++ +LW+G++          ++ E+ + +P  +   NL +L
Sbjct: 601 SLPASFRAEHLNVLRMRNSKLEKLWEGVES--------SAYPEDRVELP--SSLRNLNEL 650

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLK 520
                                    M+ C+ L+ L   I ++SL +              
Sbjct: 651 Y------------------------MQTCSELVALSAGINLESLYR-------------- 672

Query: 521 CLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSL 580
               LD+ G  +F  FP I    +++S L L  TAI+ +P  IE  S L+ L ++ C+ L
Sbjct: 673 ----LDLGGCSRFWGFPYI---SKNVSFLILNQTAIKEVPWWIENFSRLICLEMRECKRL 725

Query: 581 EILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKL 640
             +   +S LK L  +  S C  L             S  +LDG S      +  + TKL
Sbjct: 726 RYISPKISKLKLLEKVDFSNCEALT------------SASWLDGPSAVATGGN-NIYTKL 772

Query: 641 ELLNLSDCKNL 651
            +LN  +C  L
Sbjct: 773 PVLNFINCFKL 783



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 7/113 (6%)

Query: 563 IELLSGLVLLN---LKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSE 619
           +EL S L  LN   ++ C  L  L   + NL+ L  L L GCS+   FP I    K++S 
Sbjct: 638 VELPSSLRNLNELYMQTCSELVALSAGI-NLESLYRLDLGGCSRFWGFPYI---SKNVSF 693

Query: 620 LFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGC 672
           L L+ T+IKEVP  IE  ++L  L + +CK L  +   I  LK L+ ++ S C
Sbjct: 694 LILNQTAIKEVPWWIENFSRLICLEMRECKRLRYISPKISKLKLLEKVDFSNC 746


>gi|297815586|ref|XP_002875676.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321514|gb|EFH51935.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1058

 Score =  278 bits (712), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 228/686 (33%), Positives = 340/686 (49%), Gaps = 65/686 (9%)

Query: 18  DVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE------ISSKGGLVSLQRQ 71
           +VRMIGI G  G+GKTTIA  ++D  S  F  +  + ++RE      +  +   + LQ+Q
Sbjct: 247 EVRMIGIWGPPGIGKTTIATCMFDRFSSRFPLAAIMADIRECYPRLCLDERNAQLKLQKQ 306

Query: 72  LLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSR 131
           +LS +    D  I      + +   RL+ KKVLLV+D+V    QL +LA   +WFG GSR
Sbjct: 307 MLSLIFNQKDIMI----SHLGVAQERLKDKKVLLVLDEVDHSGQLDALAKEIQWFGPGSR 362

Query: 132 IIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAG 191
           IIIT+ D  +LK  G++ VYK    + DEA Q+F M AF   QP +   +L+  ++  AG
Sbjct: 363 IIITTEDLGVLKARGINHVYKVDFPSNDEAFQIFCMNAFGQKQPYEGFRKLALEVMALAG 422

Query: 192 GLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIAC 251
            LPL L+VLGS L G S  +W   L RL+     +I  I+Q S+D L + +K +FL IAC
Sbjct: 423 ELPLGLKVLGSALRGMSKPDWERALPRLKTSLDGKIGSIIQFSYDALCDEDKYLFLYIAC 482

Query: 252 FFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSP 311
            F       V   L G       G+ VL +K LI++   T+ MH LL++ G++  ++Q  
Sbjct: 483 LFIYESTTKVKELL-GKFLDVRQGLYVLAQKSLISIDGETIKMHTLLEQFGRETSRKQFV 541

Query: 312 EE-LGKRSRLWKEEEVCHVL-TESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLR 369
                KR  L  E ++C VL  ++T +    GI LD    E E+ +  S KA  +M + +
Sbjct: 542 RHGFTKRQLLVGERDICEVLEDDTTDSRRFIGINLDLSKTEEELNI--SEKALERMHDFQ 599

Query: 370 LLKICN--------LQ-LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
            ++I +        LQ +  GL Y S ++RLL W  +    LPS    +  +E+ + YS+
Sbjct: 600 FVRIKDKNRAQTERLQSVLEGLIYHSQKIRLLDWSYFQDICLPSTFNPEFLVELTLKYSK 659

Query: 421 IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
           + +LW+G K L  LK M L  SE+L  +PD + A NLE++ L  C+ L E+  S+    K
Sbjct: 660 LQKLWEGTKKLKNLKWMDLGGSEDLKELPDLSTATNLEEVNLRNCSSLVELPSSIGNATK 719

Query: 481 LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIV 540
           L +LN+ DC+            SL   NL+    T          D S      E P I 
Sbjct: 720 LELLNLDDCS------------SLNATNLREFDLT----------DCSN---LVELPSIG 754

Query: 541 EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
           + ++ L  L L+  +      S    + L   +L +C SL  LP  + N   L+ L L  
Sbjct: 755 DAIK-LERLCLDNCSNLVKLFSSINATNLHKFSLSDCSSLVELP-DIENATNLKELILQN 812

Query: 601 CSKLK-KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL-------LNLSDCKNLV 652
           CSK+        R +K     F    S+KE P +  ++T+L L       L L +C NL+
Sbjct: 813 CSKVPLSIMSWSRPLKFRMSYF---ESLKEFPHAFNIITELVLGMSRLRRLRLYNCNNLI 869

Query: 653 RLPSSIIALKSLKTLNLSGCFKLENV 678
            LP       SL  ++ + C  LE +
Sbjct: 870 SLPQ---LSNSLSWIDANNCKSLERL 892



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 45/328 (13%)

Query: 569 LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSI 627
           LV L LK  + L+ L      LK L+ + L G   LK+ P++  +  +L E+ L + +S+
Sbjct: 650 LVELTLKYSK-LQKLWEGTKKLKNLKWMDLGGSEDLKELPDL-STATNLEEVNLRNCSSL 707

Query: 628 KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
            E+PSSI   TKLELLNL DC +L           +L+  +L+ C  L  +P ++G    
Sbjct: 708 VELPSSIGNATKLELLNLDDCSSL--------NATNLREFDLTDCSNLVELP-SIGDAIK 758

Query: 688 LEELDISGTAVPHSTSWYSYI-PINLMRKSVA-----LKLPSLSGLCSLRKLNLTDCN-- 739
           LE L +   +  +    +S I   NL + S++     ++LP +    +L++L L +C+  
Sbjct: 759 LERLCLDNCS--NLVKLFSSINATNLHKFSLSDCSSLVELPDIENATNLKELILQNCSKV 816

Query: 740 ---LMEGALPSD--IGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ 794
              +M  + P    +    SLKE   + N    L   +  +S+L  + L +C  L SLPQ
Sbjct: 817 PLSIMSWSRPLKFRMSYFESLKEFPHAFNIITEL---VLGMSRLRRLRLYNCNNLISLPQ 873

Query: 795 LPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVS 854
           L  ++  +  N C SL  L      C  ++  I CL       N    F + +E  + + 
Sbjct: 874 LSNSLSWIDANNCKSLERL-----DCSFNNPKI-CLH----FAN---CFKLNQEARDLII 920

Query: 855 NTRQHLSVVVPGSEIPEWFMYQ--NEGS 880
           +T      ++PG+++P  F ++   EGS
Sbjct: 921 HTSTSRYAILPGAQVPACFNHRPTAEGS 948


>gi|449447739|ref|XP_004141625.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 505

 Score =  278 bits (712), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 145/315 (46%), Positives = 208/315 (66%), Gaps = 1/315 (0%)

Query: 17  SDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQL 76
            DVR +GI GMGG+GKTTIAR++Y  +SH F+   FLDNV+E   K  + SLQ++LL+  
Sbjct: 185 DDVRFVGIWGMGGIGKTTIARIIYKSVSHLFDGCYFLDNVKEALKKEDIASLQQKLLTGT 244

Query: 77  LKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITS 136
           L   +  I N  DG  ++  R+   K L+++DDV  + QLQ LAG  +WFGSGSR+I+T+
Sbjct: 245 LMKRNIDIPNA-DGATLIKRRISNIKALIILDDVNHLSQLQKLAGGLDWFGSGSRVIVTT 303

Query: 137 RDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLA 196
           RDEHLL +HG++  Y    L  +E LQLF+ KAF      +E   + ++++ YAGGLPLA
Sbjct: 304 RDEHLLISHGIERRYNVEVLKIEEGLQLFSQKAFGEEHTKEEYFDVCSQVVDYAGGLPLA 363

Query: 197 LEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGN 256
           +EVLGS L  + +++W + +E+L      EI++ L+IS+  L++ E+KIFLDIACFFK  
Sbjct: 364 IEVLGSSLRNKPMEDWINAVEKLWEVRDKEIIEKLKISYYMLEKSEQKIFLDIACFFKRK 423

Query: 257 DRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGK 316
            +      LE  GF  V+G+ +L EKCLIT  ++ L MHDL+QE+GQ+IV++    E  K
Sbjct: 424 SKKQAIEILESFGFPAVLGLEILEEKCLITTPHDKLHMHDLIQEMGQEIVRQNFLNEPEK 483

Query: 317 RSRLWKEEEVCHVLT 331
           R+RLW  E+V   L+
Sbjct: 484 RTRLWLREDVNLALS 498


>gi|13509223|emb|CAC35331.1| N2-A protein [Linum usitatissimum]
          Length = 1075

 Score =  278 bits (712), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 258/885 (29%), Positives = 419/885 (47%), Gaps = 120/885 (13%)

Query: 1    MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
            +D   +++  L++  S+  ++IGI GMG LGKTT+A  VY+ +S +FE   FLDN+RE  
Sbjct: 214  IDFSVDEMVKLLNLDSTSEKIIGIYGMGRLGKTTLATAVYNKVSMQFERCCFLDNIRETL 273

Query: 61   SKG-GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
             K  G+V+LQ +++S +L+       N  DG+ M+  R+ R K+ +V+DDV +  +   +
Sbjct: 274  LKNDGVVALQNKVISDILRKDFCQAKNASDGVQMIRERVSRHKIFVVLDDVNESFRFDDI 333

Query: 120  AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
             G    F + SR ++T+RD   L+     +++K  G+++D +L+LF+  AF    P ++ 
Sbjct: 334  FGKLTAFSADSRFLVTTRDARTLERLRGCKLFKHEGMSHDHSLKLFSKHAFGVDYPPEDY 393

Query: 180  VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
              L    ++   GLPLAL+V+GS L       W+  L  L+  P   +   L+IS++ L 
Sbjct: 394  ASLCEEFVQVGSGLPLALKVIGSLLFRTEKSFWKDKLIELKAIPAVNVQYRLKISYNELT 453

Query: 240  ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWMHDLL 298
            + EK+IFLD+AC F G  ++        CGF+P   IR L+++ L+ +++N   WMHD +
Sbjct: 454  DNEKQIFLDVACLFVGAKKEIPIYMWSDCGFYPTTTIRTLVQRSLVRINDNEEFWMHDHI 513

Query: 299  QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCAS 358
            ++LG+ IV  +S + L KRSR+W   +   +L    G + VE + +D            +
Sbjct: 514  RDLGRAIVCEES-QNLYKRSRIWSNNDAIDILKNREGNDCVEALRVDMRGEG----FALT 568

Query: 359  AKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCY 418
             + F + + LR L++ N  L    + +   LR L  R Y     PS L ++K + + +  
Sbjct: 569  NEEFKQFSRLRFLEVLNGDLSGNFKNVLPSLRWL--RVYHGDPCPSGLNLNKLMILELEV 626

Query: 419  SRIGELWKG---IKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
            S + + W+G   IK   KLKV+ L   + L ++PD +    LE L    C R        
Sbjct: 627  SDVTDSWEGWNEIKAAGKLKVVHLMCCKGLEKVPDLSTCRGLELLRFSICRR-------- 678

Query: 476  LLHNKLIILNMKD------------------------------CTSLITLPGKI-LMKSL 504
             +H +L I N KD                               + LI +P  I  + SL
Sbjct: 679  -MHGELDIRNFKDLKVLDIFQTRITALKGEVESLQNLQQLDVGSSGLIEVPAGISKLSSL 737

Query: 505  EKLNLKSLP-----TTISGLKCL--------------STLDVSGDLKFREFPEIVEHMEH 545
            E LNL ++      T  +GLK L                LDV      R  P +   + +
Sbjct: 738  EYLNLTNIKHDKVETLPNGLKILLISSFSLSALPSSLLRLDVRYSTNLRRLPNLAS-VTN 796

Query: 546  LSELHLEGTAIRGLP--LSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSK 603
            L+ L LE   I G+P    ++LL  L L +  N  +L+ L     NL  L+ L +  C  
Sbjct: 797  LTRLRLEEVGIHGIPGLGELKLLECLFLRDAPNLDNLDGL----ENLVLLKELAVERCRI 852

Query: 604  LKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKS 663
            L+K P                        S+  LTKL  L +  C  L  +       +S
Sbjct: 853  LEKLP------------------------SLAELTKLHKLVIGQCNILGEIYGLANLGES 888

Query: 664  LKTLNLSGCFKLENVPETLGQIESLEELDISGTAV----PHSTSWYSYIPINLMRKSVAL 719
            L  L +SGC  L  V E+L  + +L  L++SG  +    P S S Y+ +      K    
Sbjct: 889  LSHLEISGCPCL-TVVESLHSLLNLGTLELSGYGITNILPPSLSIYTKLK---SLKVYDS 944

Query: 720  KLPSLSGLCSLRKLNLTDC-NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKL 778
            +LP L+ L +LR L +  C N +E    +D+  L SL+EL +  +S   L   +T L KL
Sbjct: 945  QLPDLTNLKNLRCLKICGCDNFIE---ITDLHTLESLEELRVMGSSIRKL--DLTGLVKL 999

Query: 779  LNIELEDCKRLQSLPQLP--PNIRQVRVNGCASLVTL--LDALKL 819
              ++ + C +L  +  L    +++++ ++ C S+  L  L  LK+
Sbjct: 1000 EILQFDSCTQLTEIRGLGGLESLQRLHMSRCQSIKELPNLSGLKI 1044


>gi|449443187|ref|XP_004139362.1| PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like
           [Cucumis sativus]
          Length = 902

 Score =  278 bits (710), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 184/503 (36%), Positives = 288/503 (57%), Gaps = 14/503 (2%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK-GGLVSLQRQLLS 74
           S+ + M G+ G+GG+GKTTIA+ +Y+ I+ EFE   FL N+RE S++ GGLV  Q++LL 
Sbjct: 174 SNGITMFGLYGVGGMGKTTIAKALYNKIADEFEGCCFLSNIREASNQYGGLVQFQKELLC 233

Query: 75  QLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIII 134
           ++L      + N+  GI ++ +RL  KK+LL++DDV   +QLQ+LAG  +WFG GS++I 
Sbjct: 234 EILMDDSIKVSNLPRGITIIRNRLYSKKILLILDDVDTREQLQALAGGHDWFGHGSKVIA 293

Query: 135 TSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLP 194
           T+R++ LL THG D++    GL+YDEAL+LF+   F+   PL   ++LS R + Y  GLP
Sbjct: 294 TTRNKQLLVTHGFDKMQNVGGLDYDEALELFSWHCFRNSHPLNVYLELSKRAVDYCKGLP 353

Query: 195 LALEVLGSFL-SGRSVDEWRSTLERLEIEP-PSEILDILQISFDGLQELEKKIFLDIACF 252
           LALEVLGSFL S      ++  L+  E      +I D L+IS+DGL++  K+IF  I+C 
Sbjct: 354 LALEVLGSFLHSIGDPSNFKRILDEYEKHYLDKDIQDSLRISYDGLEDEVKEIFCYISCC 413

Query: 253 FKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQELGQQIVQRQSP 311
           F   D   V   +  C      GI  L+   L+T+   N + MH+++Q++G+ I   ++ 
Sbjct: 414 FVREDICKVKMMVXLCLEK---GITKLMNLSLLTIGRFNRVEMHNIIQQMGRTIHLSETS 470

Query: 312 EELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLL 371
           +   KR RL  +++   VL  +     V+ I L+         L   ++AF K+ NL +L
Sbjct: 471 KS-HKRKRLLIKDDAMDVLNGNKEARAVKVIKLN---FPKPTKLDIDSRAFDKVKNLVVL 526

Query: 372 KICNLQLPNG--LEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIK 429
           ++ N        LEYL + LR + W  +P   LP+   M+  IE+ + YS I    +G  
Sbjct: 527 EVGNATSSESSTLEYLPSSLRWMNWPQFPFSSLPTTYTMENLIELKLPYSSIKHFGQGYM 586

Query: 430 HLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDC 489
             ++LK + LS S  L+ +PD + A NL+ L L GC  L ++H S+   +KL+ L+    
Sbjct: 587 SCERLKEINLSDSNLLVEIPDLSTAINLKYLNLVGCENLVKVHESIGSLSKLVALHFSSS 646

Query: 490 T-SLITLPGKILMKSLEKLNLKS 511
                  P  + +KSL+ L++K+
Sbjct: 647 VKGFEQFPSCLKLKSLKFLSMKN 669



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 85/397 (21%), Positives = 158/397 (39%), Gaps = 72/397 (18%)

Query: 646  SDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWY 705
            S+   L  LPSS      L+ +N    F   ++P T   +E+L EL +  +++ H    Y
Sbjct: 534  SESSTLEYLPSS------LRWMNWPQ-FPFSSLPTTY-TMENLIELKLPYSSIKHFGQGY 585

Query: 706  SYIP----INLMRKSVALKLPSLSGLCSLRKLNLTDC-NLMEGALPSDIGNLCSLKELYL 760
                    INL   ++ +++P LS   +L+ LNL  C NL++  +   IG+L  L  L+ 
Sbjct: 586  MSCERLKEINLSDSNLLVEIPDLSTAINLKYLNLVGCENLVK--VHESIGSLSKLVALHF 643

Query: 761  SKN--SFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNG-----------C 807
            S +   F   P+ +  L  L  + +++C+  +  PQ    ++ +               C
Sbjct: 644  SSSVKGFEQFPSCLK-LKSLKFLSMKNCRIDEWCPQFSEEMKSIEYLSIGYSTVPEGVIC 702

Query: 808  ASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGS 867
             S    +   +   + +  ++C DS++      L                    +V+   
Sbjct: 703  MSAAGSISLARFPNNLADFMSCDDSVEYCKGGELK------------------QLVLMNC 744

Query: 868  EIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNNCFGSYPTHQLNC 927
             IP+W+ Y++   S+T   P++  + K    +A C  F V  +            + +  
Sbjct: 745  HIPDWYRYKSMSDSLTFFLPADYLSWKWKPLFAPCVKFEVTNDDWFQKLECKVFINDIQV 804

Query: 928  HIGHGIYGIGFRDKFGQAG----SDHLWLLYLSRQTCY-----DI------------RLP 966
                 +Y    +++ G  G     +++WL+ L   T +     DI            +L 
Sbjct: 805  WSSEEVYA-NQKERSGMFGKVSPGEYMWLIVLDPHTRFQSYSDDIMDRRSLKIIDLNQLS 863

Query: 967  LESNLEPFESNHVNVSFE--PWLGQGLEVKMCGLHPV 1001
             E N        + VSFE  PW  + + +KMCG+H +
Sbjct: 864  SEINSSQSILGKITVSFEVTPWY-KDVVIKMCGVHVI 899


>gi|357499385|ref|XP_003619981.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355494996|gb|AES76199.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1151

 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 223/687 (32%), Positives = 344/687 (50%), Gaps = 113/687 (16%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           + SR  K+  L + GS+D V MIGI G GG+GKTT+++ VY+ I H+FE   FL NVRE 
Sbjct: 290 LKSRISKVNSLSELGSNDGVCMIGILGTGGMGKTTLSQAVYNSIVHQFEFKCFLHNVREN 349

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S K G+  ++R                          RL +KKVLL++DDV  +KQ+Q L
Sbjct: 350 SVKHGIPIIKR--------------------------RLYQKKVLLIVDDVDKIKQVQVL 383

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G   W G         RD               +GLN ++AL+L   KAFK+ +     
Sbjct: 384 IGEASWLG---------RD--------------TYGLNKEQALELLRTKAFKSKKNDSSY 420

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
             +  R ++YA GLPLALEV+GS L G+S+ E  S L++ +  P  +I  IL++S+D L 
Sbjct: 421 DYILNRAVKYASGLPLALEVVGSNLFGKSIAECESLLDKYDRIPHEDIQKILKVSYDALA 480

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFL-EGCGFHPVIGIRVLIEKCLITVHNNTL---WMH 295
           E ++ +FLDIAC FKG  ++YV   L +  G+     I VL++K LI ++   +    +H
Sbjct: 481 EEQQSVFLDIACVFKGRGKEYVQEVLHDHYGYCIKSHIGVLVDKSLIKINGKYIGRVTLH 540

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYL 355
           DL++++G +IV+++S +E GKRSRLW  +++ HVL E  GT  +E I L++   +    +
Sbjct: 541 DLIEDMGMEIVRQESIKEPGKRSRLWCRDDIVHVLQEKKGTSKIEMIYLNSPSMKP---V 597

Query: 356 CASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIY 415
             + KAF KMTNL+ L I       G +YL + L    W G P K L             
Sbjct: 598 DMNEKAFKKMTNLKTLIIEKGNFSKGPKYLPSSLVFCKWIGCPSKTLS------------ 645

Query: 416 MCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSL 475
                    +   K+ + +K +IL  S++LI +P+ +   NL K   E C  L +I  S+
Sbjct: 646 ---------FLSNKNFEDMKHLILDRSQSLIHIPNVSSLQNLIKFSFENCRNLIKIDNSI 696

Query: 476 LLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
              NKL  L+ K C  L + P  + + SL++L L          KC S          + 
Sbjct: 697 WKLNKLEHLSAKGCLKLESFP-PLHLPSLKELELS---------KCDS---------LKS 737

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEIL-------PVTVS 588
           FPE++  M ++ E++L  T+I   P S + LS LV L +   R L          P+  S
Sbjct: 738 FPELLCQMTNIKEINLCDTSIGEFPFSFQYLSELVFLQVNRVRMLRFQKYNDRMNPIMFS 797

Query: 589 NLKCLRSLKLSGCSKLKK--FPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLS 646
            +  +    + G + L     P +++   +++ L L   + K +P  +    +L  L L 
Sbjct: 798 KMYSV----ILGETNLSDECLPILLKLFVNVTSLKLMKNNFKILPECLSECHRLGELVLD 853

Query: 647 DCKNL--VR-LPSSIIALKSLKTLNLS 670
           DCK L  +R +P ++  L +L+  +LS
Sbjct: 854 DCKFLEEIRGIPPNLGRLSALRCESLS 880



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 156/354 (44%), Gaps = 52/354 (14%)

Query: 565 LLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLD 623
           L S LV      C S  +  ++  N + ++ L L     L   P  V S+++L +  F +
Sbjct: 627 LPSSLVFCKWIGCPSKTLSFLSNKNFEDMKHLILDRSQSLIHIPN-VSSLQNLIKFSFEN 685

Query: 624 GTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLG 683
             ++ ++ +SI  L KLE L+   C  L   P   + L SLK L LS C  L++ PE L 
Sbjct: 686 CRNLIKIDNSIWKLNKLEHLSAKGCLKLESFPP--LHLPSLKELELSKCDSLKSFPELLC 743

Query: 684 QIESLEELDISGTAV---PHSTSWYS---YIPINLMRKSVALKLPSLSGLCSLRKLN--- 734
           Q+ +++E+++  T++   P S  + S   ++ +N +R     K           K+    
Sbjct: 744 QMTNIKEINLCDTSIGEFPFSFQYLSELVFLQVNRVRMLRFQKYNDRMNPIMFSKMYSVI 803

Query: 735 LTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQ 794
           L + NL +  LP  +    ++  L L KN+F  LP  ++   +L  + L+DCK L+ +  
Sbjct: 804 LGETNLSDECLPILLKLFVNVTSLKLMKNNFKILPECLSECHRLGELVLDDCKFLEEIRG 863

Query: 795 LPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVS 854
           +PPN+ ++    C SL +L    +L   D     C           ++F           
Sbjct: 864 IPPNLGRLSALRCESL-SLESRRRLLSQDLHEAGC---------TKISFP---------- 903

Query: 855 NTRQHLSVVVPGSE-IPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHV 907
                      GSE IP+WF +Q +G + +       + +KK+    I C+F V
Sbjct: 904 ----------NGSEGIPDWFEHQRKGDTFS------FWYRKKIP--TITCIFLV 939


>gi|357499531|ref|XP_003620054.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
 gi|355495069|gb|AES76272.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
          Length = 1101

 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 230/667 (34%), Positives = 351/667 (52%), Gaps = 83/667 (12%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREI 59
           ++SR  ++  L+D G +D V +IGI G GGLGKTT+A  VY+ I ++FE   FL NVRE 
Sbjct: 201 LESRISEVNSLLDLGCTDGVYIIGILGTGGLGKTTLAEAVYNSIVNQFECRCFLYNVREN 260

Query: 60  SSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
           S K  L  LQ QLLS+ +   D  + +  +GI+++  RL RKKVLL++DDV    QL+ L
Sbjct: 261 SFKHSLKYLQEQLLSKSIGY-DTPLEHDNEGIEIIKQRLCRKKVLLILDDVDKPNQLEKL 319

Query: 120 AGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQEC 179
            G   WFG GSR+IIT+RD +LL  HG+ ++Y+   LN +E+L+L     FK        
Sbjct: 320 VGEPGWFGQGSRVIITTRDRYLLSCHGITKIYEADSLNKEESLELLRKMTFKNDSSYDYI 379

Query: 180 VQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQ 239
           +    R + YA GLPLAL+V+GS L G+S+ +  STL++ E  PP +I  IL++SFD L+
Sbjct: 380 LN---RAVEYASGLPLALKVVGSNLFGKSIADCESTLDKYERIPPEDIQKILKVSFDTLE 436

Query: 240 ELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQ 299
           E ++ +FLDIAC FKG D      F     F  +          ++T       +HDL++
Sbjct: 437 EEQQSVFLDIACCFKGCDWQ---KFQRHFNFIMISAPDPYYTSYIVT-------LHDLIE 486

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
            +G +IV+++S +E G+R+RLW+ +++ HVL ++TGT  +E I L+          C+S 
Sbjct: 487 YMGIEIVRQESIKEPGERTRLWRHDDIAHVLKQNTGTSKIEMIYLN----------CSSM 536

Query: 360 KAFS-------KMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGY---PLKFLPSNLQMD 409
           +  +       KM  L+ L I       GL+YL   L +L W+G+   PL F        
Sbjct: 537 EPININEKAFKKMKKLKTLIIEKGYFSKGLKYLPKSLIVLKWKGFTSEPLSF-------- 588

Query: 410 KTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLY 469
                  C+S         K L  L+++    S+ L  +PD +G P L +L  + C  L 
Sbjct: 589 -------CFS-------FKKKLMNLRILTFDCSDYLTHIPDVSGLPELIRLSFQNCKNLT 634

Query: 470 EIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG 529
            IH S+    KL IL+   C  L + P  + + SL+KL L           C S      
Sbjct: 635 TIHNSVGYLYKLEILDATMCRKLKSFP-PLCLPSLKKLELHF---------CRS------ 678

Query: 530 DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSN 589
               + FPE++  M ++ E+ L  T+I  +P S + L+ L  L + + ++ +ILP  +S 
Sbjct: 679 ---LKSFPELLCKMSNIKEIWLCDTSIEEMPFSFKNLNELQKLVIMD-KNFKILPKCLSE 734

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCK 649
              L  L L  C  L+   EI     +L+ L+ +G   K + SS   +   + L+ + C 
Sbjct: 735 CHYLEHLYLDYCESLE---EIRGIPPNLTNLYAEGC--KSLSSSSRRMLLSQRLHDAGCN 789

Query: 650 NLVRLPS 656
           N+V LP+
Sbjct: 790 NIV-LPT 795



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 48/216 (22%), Positives = 89/216 (41%), Gaps = 48/216 (22%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
           LR L       L   P+ V  + +L  L F +  ++  + +S+  L KLE+L+ + C+ L
Sbjct: 599 LRILTFDCSDYLTHIPD-VSGLPELIRLSFQNCKNLTTIHNSVGYLYKLEILDATMCRKL 657

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPIN 711
              P   + L SLK L L  C  L++ PE L ++ +++E+ +  T++             
Sbjct: 658 KSFPP--LCLPSLKKLELHFCRSLKSFPELLCKMSNIKEIWLCDTSIE------------ 703

Query: 712 LMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTS 771
                                            +P    NL  L++L +   +F  LP  
Sbjct: 704 --------------------------------EMPFSFKNLNELQKLVIMDKNFKILPKC 731

Query: 772 ITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGC 807
           ++    L ++ L+ C+ L+ +  +PPN+  +   GC
Sbjct: 732 LSECHYLEHLYLDYCESLEEIRGIPPNLTNLYAEGC 767


>gi|32329191|gb|AAP74724.1| disease resistance-like protein KR7 [Glycine max]
          Length = 402

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 164/396 (41%), Positives = 246/396 (62%), Gaps = 15/396 (3%)

Query: 21  MIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLA 80
           MIGI GMGG+GK+T+AR VY+L +  F+ S FL NVRE S++ GL  LQ  LLSQ+LK  
Sbjct: 1   MIGIHGMGGVGKSTLARAVYNLHTDHFDDSCFLQNVREESNRHGLKRLQSILLSQILKKE 60

Query: 81  DNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW----FGSGSRIIITS 136
            N + +   G  M+ ++L+ KKVLLV+DDV + KQLQ++ G   W    FG+   +IIT+
Sbjct: 61  IN-LASEQQGTSMIKNKLKGKKVLLVLDDVDEHKQLQAIVGKSVWSESEFGTRLVLIITT 119

Query: 137 RDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL-QECVQLSARIIRYAGGLPL 195
           RD+ LL ++GV   ++   L+  +A+QL   KAFKTY  + Q   Q+   ++ +  GLPL
Sbjct: 120 RDKQLLTSYGVKRTHEVKELSKKDAIQLLKRKAFKTYDEVDQSYNQVLNDVVTWTSGLPL 179

Query: 196 ALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKG 255
           ALEV+GS L G+S+ EW S +++ +  P  EIL IL++SFD L+E EK +FLDI C  KG
Sbjct: 180 ALEVIGSNLFGKSIKEWESAIKQYQRIPNKEILKILKVSFDALEEEEKSVFLDITCCLKG 239

Query: 256 ND----RDYVTNFLEGC-GFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQS 310
                  D + +  + C  +H    I VL++K LI + ++ + +HDL++ +G++I +++S
Sbjct: 240 YKCREIEDILHSLYDNCMKYH----IGVLVDKSLIQISDDRVTLHDLIENMGKEIDRQKS 295

Query: 311 PEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRL 370
           P+E GKR RLW  +++  VL +++GT  V+ I LD    + +  +  +  AF +M NL+ 
Sbjct: 296 PKETGKRRRLWLLKDIIQVLKDNSGTSEVKIICLDFPISDKQETIEWNGNAFKEMKNLKA 355

Query: 371 LKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNL 406
           L I N  L  G  YL   LR+L W  +P   LPS+ 
Sbjct: 356 LIIRNGILSQGPNYLPESLRILEWHRHPSHCLPSDF 391


>gi|356499336|ref|XP_003518497.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 746

 Score =  277 bits (708), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 174/424 (41%), Positives = 259/424 (61%), Gaps = 11/424 (2%)

Query: 4   RCEKLRFLMDSGSSD--VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS 61
           R E++  L+D    D  VRM+G+ G+ G+GKT +A  +Y+ I + F+A+ FL NVRE S+
Sbjct: 317 RMEEVMSLLDMKPYDETVRMLGVWGLPGVGKTELATALYNNIVNHFDAASFLSNVREKSN 376

Query: 62  K-GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
           K  GL  LQ+ LLS++ +  D  +     G+  +  +L+ KKVLLV+DDV D  +L+ LA
Sbjct: 377 KINGLEDLQKTLLSEMREELDTDLGCANKGMSEIKRKLEGKKVLLVLDDVDDKDKLEKLA 436

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G R+WFGSGSRIIIT+RD+ +L  H VD +Y+   L+   +L+LF   AFK   P     
Sbjct: 437 GGRDWFGSGSRIIITTRDKDVLIAHQVDNIYQMEELDKHHSLELFCWNAFKQSHPKTGFE 496

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSG---RSVDEWRSTLERLEIEPPSEILDILQISFDG 237
            +S R I  A GLPLAL+V+GS L+     S+++W+  LE  E  PP  IL++L+ S+D 
Sbjct: 497 DVSLRAIDVAKGLPLALKVIGSDLATLDEESLEDWKCALEEYERTPPERILEVLKKSYDR 556

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDL 297
           L    K++FLDIACFFKG  ++YV N L+   F     I+VL+ K L+T+ +  L MHDL
Sbjct: 557 LGSKPKQVFLDIACFFKGEKKEYVENVLDE-DFGAKSNIKVLVNKSLLTIEDGCLKMHDL 615

Query: 298 LQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA 357
           +Q++G+ IV++++P   G+ SR+W  E+V  +LT+  G++ ++GI+LD    E   +   
Sbjct: 616 IQDMGRDIVRQEAPNP-GECSRVWYHEDVIDILTDDLGSDKIQGIMLDPPQREEVDW--- 671

Query: 358 SAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
           +  AF KM  LR+L + N    +  ++L N LR+L W  YP K  PS     K I I + 
Sbjct: 672 NGTAFDKMKRLRILIVRNTSFLSEPQHLPNHLRVLDWEEYPSKSFPSKFHPKKIIVINLR 731

Query: 418 YSRI 421
            S +
Sbjct: 732 RSHL 735


>gi|223452605|gb|ACM89629.1| resistance protein [Glycine max]
          Length = 1001

 Score =  276 bits (706), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 220/649 (33%), Positives = 330/649 (50%), Gaps = 56/649 (8%)

Query: 8   LRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLV 66
           ++ L+D G+ DV  M+GI G+GG+GKTT+A  VY+ I+  FEA  FL+NVRE S+K GL 
Sbjct: 198 VKSLLDVGADDVVHMVGIHGLGGVGKTTLAVAVYNSIACHFEACCFLENVRETSNKKGLE 257

Query: 67  SLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWF 126
           SLQ  LLS+ +      + N  +G D++  +L+ KKVLLV+DDV + +QLQ++  + +WF
Sbjct: 258 SLQNILLSKTVGDMKIEVTNSREGTDIIKRKLKEKKVLLVLDDVNEHEQLQAIIDSPDWF 317

Query: 127 GSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQ-LSAR 185
           G GSR+IIT+RDE LL  H V   YK   LN   ALQL   KAF   + +      +  R
Sbjct: 318 GRGSRVIITTRDEQLLVLHNVKRTYKVRELNEKHALQLLTQKAFGLEKKVDPSYHDILNR 377

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
            + YA GLPLAL+V+GS L G+S++EW S L+  E  P   I   L++S+D L E EK I
Sbjct: 378 AVTYASGLPLALKVIGSNLFGKSIEEWESVLDGYERSPDKSIYMTLKVSYDALNEDEKSI 437

Query: 246 FLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNN-----TLWMHDLLQ 299
           FLDIAC FK  +   V + L    G      I VL+EK LI +H +      + +HDL++
Sbjct: 438 FLDIACCFKDYELAKVQDILYAHYGRSMKYDIGVLVEKSLINIHRSWYDKEVMRLHDLIE 497

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           ++G++IV+R+SP+E GKRSRLW  E++  VL E      +  ++LD      E+      
Sbjct: 498 DVGKEIVRRESPKEPGKRSRLWSHEDIKEVLQEKKSVVNLTSLILDECDSLTEI---PDV 554

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYP-LK-FLPSNLQMDKTIEIYMC 417
              SK+  L      NL   +    L  +L++L   G P LK F P  L   +++++  C
Sbjct: 555 SCLSKLEKLSFKDCRNLFTIHPSVGLLGKLKILNAEGCPELKSFPPLKLTSLESLDLSYC 614

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL----EGCTRLYEIHP 473
            S +    + +  ++ +  + LS        P F     L++L L    E   +L +   
Sbjct: 615 -SSLESFPEILGKMENITELDLSECPITKLPPSFRNLTRLQELELDHGPESADQLMDFDA 673

Query: 474 SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKF 533
           + L+ N  ++  + D ++      ++  + L    LK      S +  L TL++S +L  
Sbjct: 674 ATLISNICMMPELYDISA-----RRLQWRLLPDDALKLTSVVCSSVHSL-TLELSDEL-- 725

Query: 534 REFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCL 593
              P  +    ++  L LEG+    +P  I           K CR L IL          
Sbjct: 726 --LPLFLSWFVNVENLRLEGSKCTVIPECI-----------KECRFLSILI--------- 763

Query: 594 RSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL 642
               LSGC +L++    +R +    E F    S     SSI +L   EL
Sbjct: 764 ----LSGCDRLQE----IRGIPPNLERFAATESPDLTSSSISMLLNQEL 804



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 101/404 (25%), Positives = 161/404 (39%), Gaps = 77/404 (19%)

Query: 593 LRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKLELLNLSDCKNL 651
           L SL L  C  L + P+ V  +  L +L F D  ++  +  S+ LL KL++LN   C  L
Sbjct: 537 LTSLILDECDSLTEIPD-VSCLSKLEKLSFKDCRNLFTIHPSVGLLGKLKILNAEGCPEL 595

Query: 652 VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPIN 711
              P   + L SL++L+LS C  LE+ PE LG++E++ ELD+S   +       + +P  
Sbjct: 596 KSFPP--LKLTSLESLDLSYCSSLESFPEILGKMENITELDLSECPI-------TKLP-- 644

Query: 712 LMRKSVALKLPSLSGLCSLRKLNL-----TDCNLMEGALPSDIGNLCSLKELY------- 759
                     PS   L  L++L L     +   LM+    + I N+C + ELY       
Sbjct: 645 ----------PSFRNLTRLQELELDHGPESADQLMDFDAATLISNICMMPELYDISARRL 694

Query: 760 ---LSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDA 816
              L  +  + L + +      L +EL D + L        N+  +R+ G    V + + 
Sbjct: 695 QWRLLPDDALKLTSVVCSSVHSLTLELSD-ELLPLFLSWFVNVENLRLEGSKCTV-IPEC 752

Query: 817 LKLCKSDSTMI--AC------------LDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSV 862
           +K C+  S +I   C            L+      +  L  S +   L    +   H   
Sbjct: 753 IKECRFLSILILSGCDRLQEIRGIPPNLERFAATESPDLTSSSISMLLNQELHEAGHTDF 812

Query: 863 VVPGSEIPEWFMYQNEGSSI--------------TVTRPSNLYNKKKLVGYAICCVFHVL 908
            +P  +IPEWF  Q+ G SI               V      Y+   LV   I    H  
Sbjct: 813 SLPILKIPEWFECQSRGPSIFFWFRNEFPAITFCIVKSHFEAYSSDSLVLSVIINKKHEH 872

Query: 909 KNSRGNN-CFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLW 951
           K+ R ++ CF   P+          I+ +  +D   +  S   W
Sbjct: 873 KHDRFHDGCFSKTPS--------TSIFRLQMKDNLDEEISKSEW 908


>gi|7488167|pir||B71437 probable resistance gene - Arabidopsis thaliana
          Length = 1422

 Score =  276 bits (706), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 257/839 (30%), Positives = 400/839 (47%), Gaps = 132/839 (15%)

Query: 21  MIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISS--KGGLVSLQRQLLSQLLK 78
           M+GI G  G+GK+TI R ++  +S +F    F+       S   G  +S Q++LLS++L 
Sbjct: 241 MVGIWGQSGIGKSTIGRALFSQLSSQFPLRAFVTYKSTSGSDVSGMKLSWQKELLSEILG 300

Query: 79  LADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRD 138
             D  I    D   ++  RL+ KKVL+++DDV +++ L++L G  EWFGSGSRII+ ++D
Sbjct: 301 QKDIKI----DHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGSRIIVITQD 356

Query: 139 EHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALE 198
             LLK H +D VY+    +   ALQ+ +  AF    P  +   L+  +   AG LPL L 
Sbjct: 357 RQLLKAHEIDLVYEVKLPSQGLALQMISQYAFGKDSPPDDFKALAFEVAELAGSLPLGLS 416

Query: 199 VLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDR 258
           VLGS L GR  DEW   + RL  +   +I + L++ +D                      
Sbjct: 417 VLGSSLKGRDKDEWVKMMPRLRNDSDDKIEETLRVCYDS--------------------- 455

Query: 259 DYVTNFLEGCGFHPVIGIRVLIEKCLITVH-NNTLWMHDLLQELGQQIVQRQSPEELGKR 317
             V   LE       +G+ +L+EK LI +  +  + MH+LL++LG++I + +S    GKR
Sbjct: 456 -NVKELLED-----DVGLTMLVEKSLIRITPDGDIEMHNLLEKLGREIDRAKSKGNPGKR 509

Query: 318 SRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI---C 374
             L   E++  VL E TGTE++ GI L +  +          K F  M NL+ L+I    
Sbjct: 510 QFLTNFEDIQEVLAEKTGTEILLGIRLPHPGYLTTRSFLIDEKLFKGMRNLQYLEIGYWS 569

Query: 375 NLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKL 434
           +  LP  L YL  +LRLL W   PLK LPS  + +  +++ M  S++ +LW+G   L  L
Sbjct: 570 DGDLPQSLVYLPLKLRLLEWVYCPLKSLPSTFRAEYLVKLIMKNSKLEKLWEGTLPLGSL 629

Query: 435 KVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLIT 494
           K M L +S+    +PD + A NLE+                        LN+ +C SL+T
Sbjct: 630 KKMNLWYSKYFKEIPDLSLAINLEE------------------------LNLSECESLVT 665

Query: 495 LPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG----DLKFREFPEIVEHMEHLSELH 550
                            LP++I     L TL  SG    DLK       +E M +L  L 
Sbjct: 666 -----------------LPSSIQNAIKLRTLYCSGVLLIDLKS------LEGMCNLEYLS 702

Query: 551 LEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLS-GCSKLKKFPE 609
           ++ + + G    +   S L LL   NC     L    SN K    +KL    S L+K  +
Sbjct: 703 VDCSRMEGTQGIVYFPSKLRLLLWNNCP----LKRLHSNFKVEYLVKLRMENSDLEKLWD 758

Query: 610 IVRSMKDLSELFLDGTS-IKEVPS---SIEL---LTKLELLNLSDCKNLVRLPSSIIALK 662
             + +  L ++FL G+  +KE+P    +I L     KL  L++SDCK L   P+  + L+
Sbjct: 759 GTQPLGRLKQMFLRGSKYLKEIPDLSLAINLEENAIKLIYLDISDCKKLESFPTD-LNLE 817

Query: 663 SLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK-L 721
           SL+ LNL+GC  L N P        ++  +     V     W   +P  L      ++ +
Sbjct: 818 SLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVVEDCFWNKNLPAGLDYLDCLMRCM 877

Query: 722 P-----------------------SLSGLCSLRKLNLTDC-NLMEGALPSDIGNLCSLKE 757
           P                        +  L SL +++L++  NL E  +P D+    +LK 
Sbjct: 878 PCEFRPEYLVFLNVRCYKHEKLWEGIQSLGSLEEMDLSESENLTE--IP-DLSKATNLKH 934

Query: 758 LYLSK-NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP--PNIRQVRVNGCASLVTL 813
           LYL+   S V+LP++I +L KL+ +E+++C  L+ LP      ++  + ++GC+SL T 
Sbjct: 935 LYLNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDVNLSSLETLDLSGCSSLRTF 993



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 170/608 (27%), Positives = 266/608 (43%), Gaps = 136/608 (22%)

Query: 360  KAFSKMTNLRLLKI--CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMC 417
            K+   M NL  L +    ++   G+ Y  ++LRLL W   PLK L SN +++  +++ M 
Sbjct: 690  KSLEGMCNLEYLSVDCSRMEGTQGIVYFPSKLRLLLWNNCPLKRLHSNFKVEYLVKLRME 749

Query: 418  YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLE----KLI---LEGCTRLYE 470
             S + +LW G + L +LK M L  S+ L  +PD + A NLE    KLI   +  C +L E
Sbjct: 750  NSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLEENAIKLIYLDISDCKKL-E 808

Query: 471  IHPSLLLHNKLIILNMKDCTSLITLPG-------------------------KILMKSLE 505
              P+ L    L  LN+  C +L   P                          K L   L+
Sbjct: 809  SFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVVEDCFWNKNLPAGLD 868

Query: 506  KLN--LKSLPTT----------------------ISGLKCLSTLDVSGDLKFREFPEIVE 541
             L+  ++ +P                        I  L  L  +D+S      E P++  
Sbjct: 869  YLDCLMRCMPCEFRPEYLVFLNVRCYKHEKLWEGIQSLGSLEEMDLSESENLTEIPDL-S 927

Query: 542  HMEHLSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSG 600
               +L  L+L    ++  LP +I  L  LV L +K C  LE+LP  V NL  L +L LSG
Sbjct: 928  KATNLKHLYLNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDV-NLSSLETLDLSG 986

Query: 601  CSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
            CS L+ FP I +S+K    L+L+ T+I+E+   +   TKLE L L++CK+LV LPS+I  
Sbjct: 987  CSSLRTFPLISKSIK---WLYLENTAIEEI-LDLSKATKLESLILNNCKSLVTLPSTIGN 1042

Query: 661  LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALK 720
            L++L+ L +  C  LE +P  +  + SL  LD+SG +                       
Sbjct: 1043 LQNLRRLYMKRCTGLEVLPTDV-NLSSLGILDLSGCS----------------------- 1078

Query: 721  LPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLN 780
                    SLR   L   N++                LYL   +   +P  I   ++L  
Sbjct: 1079 --------SLRTFPLISTNIVW---------------LYLENTAIGEVPCCIEDFTRLRV 1115

Query: 781  IELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDS----LKLL 836
            + +  C+RL+++    PNI ++R    A        +K   SD+T++A ++     + L 
Sbjct: 1116 LLMYCCQRLKNIS---PNIFRLRSLMFADFTDCRGVIKAL-SDATVVATMEDHVSCVPLS 1171

Query: 837  GNKSLAFSMLREYLEAVS---------NTRQHL------SVVVPGSEIPEWFMYQNEGSS 881
             N         + LE+ S         + R+ +       V +PG EIP++F Y+  G S
Sbjct: 1172 ENIEYTCERFWDALESFSFCNCFKLERDARELILRSCFKHVALPGGEIPKYFTYRAYGDS 1231

Query: 882  ITVTRPSN 889
            +TVT P +
Sbjct: 1232 LTVTLPQS 1239


>gi|356559371|ref|XP_003547973.1| PREDICTED: TMV resistance protein N isoform 1 [Glycine max]
          Length = 1001

 Score =  276 bits (705), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 220/649 (33%), Positives = 331/649 (51%), Gaps = 56/649 (8%)

Query: 8   LRFLMDSGSSDV-RMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLV 66
           ++ L+D G+ DV  M+GI G+GG+GKTT+A  VY+ I+  FEA  FL+NVRE S+K GL 
Sbjct: 198 VKSLLDVGADDVVHMVGIHGLGGVGKTTLAVAVYNSIACHFEACCFLENVRETSNKKGLE 257

Query: 67  SLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWF 126
           SLQ  LLS+ +      + N  +G D++  +L+ KKVLLV+DDV + +QLQ++  + +WF
Sbjct: 258 SLQNILLSKTVGDMKIEVTNSREGTDIIKRKLKEKKVLLVLDDVNEHEQLQAIIDSPDWF 317

Query: 127 GSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQ-LSAR 185
           G GSR+IIT+RDE LL  H V   YK   LN   ALQL   KAF   + +      +  R
Sbjct: 318 GRGSRVIITTRDEQLLVLHNVKRTYKVRELNEKHALQLLTQKAFGLEKKVDPSYHDILNR 377

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
            + YA GLPLAL+V+GS L G+S++EW S L+  E  P   I   L++S+D L E EK I
Sbjct: 378 AVTYASGLPLALKVIGSNLFGKSIEEWESVLDGYERSPDKSIYMTLKVSYDALNEDEKSI 437

Query: 246 FLDIACFFKGNDRDYVTNFLEG-CGFHPVIGIRVLIEKCLITVHNN-----TLWMHDLLQ 299
           FLDIAC FK  +   V + L    G      I VL+EK LI +H +      + +HDL++
Sbjct: 438 FLDIACCFKDYELAKVQDILYAHYGRSMKYDIGVLVEKSLINIHRSWYDKEVMRLHDLIE 497

Query: 300 ELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASA 359
           ++G++IV+R+SP+E GKRSRLW  E++  VL E      +  ++LD      E+      
Sbjct: 498 DVGKEIVRRESPKEPGKRSRLWSHEDIKEVLQEKKTLVNLTSLILDECDSLTEI---PDV 554

Query: 360 KAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYP-LK-FLPSNLQMDKTIEIYMC 417
              S + NL   +  NL   +    L  +L++L   G P LK F P  L   +++++  C
Sbjct: 555 SCLSNLENLSFSECLNLFRIHHSVGLLGKLKILNAEGCPELKSFPPLKLTSLESLDLSYC 614

Query: 418 YSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLIL----EGCTRLYEIHP 473
            S +    + +  ++ +  + LS        P F     L++L L    E   +L +   
Sbjct: 615 -SSLESFPEILGKMENITELDLSECPITKLPPSFRNLTRLQELELDHGPESADQLMDFDA 673

Query: 474 SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKF 533
           + L+ N  ++  + D ++      ++  + L    LK      S +  L TL++S +L  
Sbjct: 674 ATLISNICMMPELYDISA-----RRLQWRLLPDDALKLTSVVCSSVHSL-TLELSDEL-- 725

Query: 534 REFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCL 593
              P  +    ++  L LEG+    +P  I           K CR L IL          
Sbjct: 726 --LPLFLSWFVNVENLRLEGSKCTVIPECI-----------KECRFLSILI--------- 763

Query: 594 RSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL 642
               LSGC +L++    +R +    E F    S     SSI +L   EL
Sbjct: 764 ----LSGCDRLQE----IRGIPPNLERFAATESPDLTSSSISMLLNQEL 804



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 153/407 (37%), Gaps = 92/407 (22%)

Query: 562 SIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELF 621
           S+ LL  L +LN + C  L+  P     L  L SL LS CS L+ FPEI+  M++++EL 
Sbjct: 577 SVGLLGKLKILNAEGCPELKSFPPL--KLTSLESLDLSYCSSLESFPEILGKMENITELD 634

Query: 622 LDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPET 681
           L    I ++P S   LT+L+ L L         P S   L       L            
Sbjct: 635 LSECPITKLPPSFRNLTRLQELELDHG------PESADQLMDFDAATL------------ 676

Query: 682 LGQIESLEEL-DISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLC-SLRKLNLTDCN 739
           +  I  + EL DIS   +      +  +P +      ALKL S+  +C S+  L L    
Sbjct: 677 ISNICMMPELYDISARRLQ-----WRLLPDD------ALKLTSV--VCSSVHSLTL---E 720

Query: 740 LMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNI 799
           L +  LP  +    +++ L L  +    +P  I     L  + L  C RLQ +  +PPN+
Sbjct: 721 LSDELLPLFLSWFVNVENLRLEGSKCTVIPECIKECRFLSILILSGCDRLQEIRGIPPNL 780

Query: 800 RQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQH 859
            +        L +                   S+ +L N+ L             +   H
Sbjct: 781 ERFAATESPDLTS------------------SSISMLLNQEL-------------HEAGH 809

Query: 860 LSVVVPGSEIPEWFMYQNEGSSI--------------TVTRPSNLYNKKKLVGYAICCVF 905
               +P  +IPEWF  Q+ G SI               V      Y+   LV   I    
Sbjct: 810 TDFSLPILKIPEWFECQSRGPSIFFWFRNEFPAITFCIVKSHFEAYSSDSLVLSVIINKK 869

Query: 906 HVLKNSRGNN-CFGSYPTHQLNCHIGHGIYGIGFRDKFGQAGSDHLW 951
           H  K+ R ++ CF   P+          I+ +  +D   +  S   W
Sbjct: 870 HEHKHDRFHDGCFSKTPS--------TSIFRLQMKDNLDEEISKSEW 908


>gi|255547478|ref|XP_002514796.1| hypothetical protein RCOM_1077370 [Ricinus communis]
 gi|223545847|gb|EEF47350.1| hypothetical protein RCOM_1077370 [Ricinus communis]
          Length = 968

 Score =  275 bits (704), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 194/594 (32%), Positives = 300/594 (50%), Gaps = 89/594 (14%)

Query: 103 VLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEAL 162
           +L+V+D++ D +Q++ LA    WFG G+RIIITSRD+ + +   VD +Y+   L   EAL
Sbjct: 197 ILIVLDNIDDYEQIELLAEEHTWFGEGNRIIITSRDKSVFQDR-VDGIYEVEALTEHEAL 255

Query: 163 QLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIE 222
            LF + AF+     ++ ++LS  + +                      EWRS +++L   
Sbjct: 256 HLFRLFAFRESHSKRDHMELSKEVTQ---------------------KEWRSKVKKLGRI 294

Query: 223 PPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEK 282
           P  +I +IL+ S+D L   +++IFLDIACFFKG     V  FL+ CGF  +IG++VL +K
Sbjct: 295 PDKKIQNILKTSYDELDSHDQQIFLDIACFFKGEPIYCVVRFLDACGFSTLIGLKVLADK 354

Query: 283 CLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGI 342
            L+ + N  + MHDLLQE+G+QI+ RQ  +E G RSRLW  E++ HVL ++TG+  ++G+
Sbjct: 355 SLVIMLNEKVDMHDLLQEMGRQII-RQESKEPGIRSRLWNREDIYHVLKKNTGSGAIKGL 413

Query: 343 VLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQ--------------------LPNGL 382
            LD    E    +    + F+ M  ++L K  N                       P GL
Sbjct: 414 CLDKSKLEK---ISLPTRVFANMNGIKLFKFHNFDSNVDTVRYFKDVEPVPENMVFPEGL 470

Query: 383 EYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHS 442
           E+L N LR L W  YP K LPS+ Q +K +EI +  + + +  K  + L +         
Sbjct: 471 EHLPNELRFLQWHFYPEKSLPSSFQPEKLLEINLSVAVLKDFGKECRELTE--------- 521

Query: 443 ENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMK 502
                MP+F+ AP+L  +   GC  L E+ PS+   NKL  L +  C+ + ++P    +K
Sbjct: 522 -----MPNFSSAPDLRMIDCVGCISLVEVSPSIGCLNKLHTLILAYCSRITSVPS---IK 573

Query: 503 SLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLS 562
           S+  LNL   P                  KF + P  +        L+L GT +  +P S
Sbjct: 574 SVVLLNLAYCPIN----------------KFPQLPLTIR------VLNLSGTELGEVP-S 610

Query: 563 IELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL 622
           I   S  ++LNL+ C  L+ILP +   L+ L SL  + C  + +    +  +  L  L L
Sbjct: 611 IGFHSRPLILNLRGCIKLKILPDSFFGLRDLMSLDCAPCLNISQLESNISLITSLRFLCL 670

Query: 623 DGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
            GT ++ +PS+I+ L+ LE LNL   + L  LP        L  L++S C  L+
Sbjct: 671 VGTDLESLPSAIQQLSILEELNLCFSRRLRSLPK---LPPHLHRLDVSHCTSLQ 721



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 201/453 (44%), Gaps = 82/453 (18%)

Query: 493 ITLPGKIL--MKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEH-LSEL 549
           I+LP ++   M  ++     +  + +  ++     DV    +   FPE +EH+ + L  L
Sbjct: 423 ISLPTRVFANMNGIKLFKFHNFDSNVDTVRYFK--DVEPVPENMVFPEGLEHLPNELRFL 480

Query: 550 HLEGTAIRGLPLSIEL-------LSGLVLLNL-KNCRSLEILPVTVSNLKCLRSLKLSGC 601
                  + LP S +        LS  VL +  K CR L  +P   S+   LR +   GC
Sbjct: 481 QWHFYPEKSLPSSFQPEKLLEINLSVAVLKDFGKECRELTEMP-NFSSAPDLRMIDCVGC 539

Query: 602 SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
                                   S+ EV  SI  L KL  L L+ C  +  +PS    +
Sbjct: 540 -----------------------ISLVEVSPSIGCLNKLHTLILAYCSRITSVPS----I 572

Query: 662 KSLKTLNLSGC--FKLENVPETLGQIESLEELDISGTA---VPHSTSWYSYIPINLMRKS 716
           KS+  LNL+ C   K   +P T+        L++SGT    VP S  ++S   I  +R  
Sbjct: 573 KSVVLLNLAYCPINKFPQLPLTI------RVLNLSGTELGEVP-SIGFHSRPLILNLRGC 625

Query: 717 VALK-LP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITH 774
           + LK LP S  GL  L  L+   C L    L S+I  + SL+ L L      SLP++I  
Sbjct: 626 IKLKILPDSFFGLRDLMSLDCAPC-LNISQLESNISLITSLRFLCLVGTDLESLPSAIQQ 684

Query: 775 LSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKL------------CKS 822
           LS L  + L   +RL+SLP+LPP++ ++ V+ C SL   LD+  L            C  
Sbjct: 685 LSILEELNLCFSRRLRSLPKLPPHLHRLDVSHCTSLQ--LDSTSLIGIQGYWGKLFFCDC 742

Query: 823 DSTMIACLDSLKLLGNKS---LAFSMLREYLEAVSNTRQH-------LSVVVPGSEIPEW 872
            S     + S+ +  +K    LA +  + Y E  ++++ H         V++PG+ IP+W
Sbjct: 743 TSLNHKEIRSILMHAHKRVLLLAHAPGKLYKEFNTSSKNHSVEWKRKFVVIIPGNIIPKW 802

Query: 873 FMYQNEGSSITVTRPSNLYNKKKLVGYAICCVF 905
              Q+ G S+T+  P N ++    +G+A+  VF
Sbjct: 803 ISDQSSGYSVTIPLPPNWFH--NFLGFAVGIVF 833


>gi|315507089|gb|ADU33180.1| putative TIR-CC-NBS-AAA+ATPase [Cucumis sativus]
          Length = 856

 Score =  275 bits (704), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 187/496 (37%), Positives = 283/496 (57%), Gaps = 22/496 (4%)

Query: 16  SSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSK-GGLVSLQRQLLS 74
           S+++ M+G+ G+GG+GKTT+A+ +Y+ I+ EFE   FL NVRE S++  GLV LQ+ LL 
Sbjct: 209 SNEITMVGLYGIGGMGKTTLAKALYNKIADEFEGCCFLSNVREASNQYWGLVELQKTLLR 268

Query: 75  QLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIII 134
           ++L      + NV  GI ++  RL  KK++L++DDV   +QLQ+LAG   WFG GS++I 
Sbjct: 269 EILMDDSIKVSNVGIGISIIRDRLCSKKIILILDDVDTHEQLQALAGGHHWFGHGSKVIA 328

Query: 135 TSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLP 194
           T+R++ LL +HG + + + +GLN  E L+LF+  AF    P  + + +S R + Y  GLP
Sbjct: 329 TTRNKQLLASHGFNILKRVNGLNAIEGLELFSWHAFNNCHPSSDYLDVSKRAVHYCKGLP 388

Query: 195 LALEVLGSFLSGRSVDEWRSTLERLEIEPPSEIL-----DILQISFDGLQELEKKIFLDI 249
           LALEVLGSFL+  S+D+ +S  ER+  E  +  L     DIL+IS+D L++  K IFL I
Sbjct: 389 LALEVLGSFLN--SIDD-QSKFERILDEYENSYLDKGIQDILRISYDELEQDVKDIFLYI 445

Query: 250 ACFFKGNDRDYVTNFLEGCG--FHPVIGIRVLIEKCLITVHN-NTLWMHDLLQELGQQIV 306
           +C F   D++ V   L+ C   F   +GI+ L +  L+T+   N + MHDL+Q++G  I 
Sbjct: 446 SCCFVHEDKNEVQMMLKECDSRFRLEMGIKKLTDLSLLTIDKFNRVEMHDLIQQMGHTIH 505

Query: 307 QRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMT 366
             ++     KR RL  E++V  VL        V+ I L N+H   E  L   ++ F K+ 
Sbjct: 506 LLETSNS-HKRKRLLFEKDVMDVLNGDMEARAVKVIKL-NFHQPTE--LDIDSRGFEKVK 561

Query: 367 NLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWK 426
           NL +LK+ N+     LEYL + LR + W  +P   LPS   ++K  E+ M  S I     
Sbjct: 562 NLVVLKVHNVTSSKSLEYLPSSLRWMIWPKFPFSSLPSTYSLEKLTELSMPSSFIKHFGN 621

Query: 427 GIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEI---HPSLLLHNKLII 483
           G  +   LK + L++S+ L  + D + A NLE+L L  C +L      +  L+L N   I
Sbjct: 622 GYLNCKWLKRINLNYSKFLEEISDLSSAINLEELNLSECKKLEYADGKYKQLILMNNCDI 681

Query: 484 ---LNMKDCTSLITLP 496
               + K   + IT P
Sbjct: 682 PEWFHFKSTNNSITFP 697


>gi|357468565|ref|XP_003604567.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505622|gb|AES86764.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 822

 Score =  275 bits (703), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 164/409 (40%), Positives = 235/409 (57%), Gaps = 48/409 (11%)

Query: 124 EWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLS 183
           +WFGSGSRIIIT+RD+ +++   V++VY    ++  E+L+LF+  AFK            
Sbjct: 215 KWFGSGSRIIITTRDKQIIRGDRVNQVYIMEEIDESESLELFSWHAFK------------ 262

Query: 184 ARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE-LE 242
               +Y GGLPLALEVLGS+L  R V +W   LE     P  ++   L+IS+DGL +  E
Sbjct: 263 ----KYCGGLPLALEVLGSYLFDRQVTKWECLLENSREFPNDQVQKKLKISYDGLNDDTE 318

Query: 243 KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQEL 301
           + IFLDIA FF G DR+ V + L GCG    IGI VL+E+ L+T+ + N L MHDLL+++
Sbjct: 319 RDIFLDIAFFFIGMDRNDVMDILNGCGLFAEIGISVLVERSLVTIDDKNKLGMHDLLRDM 378

Query: 302 GQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKA 361
           G++I++++SP++L KRSRLW  E+V  V   +   +L                 C S  A
Sbjct: 379 GREIIRQKSPKKLEKRSRLWFHEDVHDVFVITKFLKLAANAK------------CFSTNA 426

Query: 362 FSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRI 421
           F  M  LRLL+   +QL    +YLS  LR L W  +PL  +P+N      + I +  + I
Sbjct: 427 FENMKKLRLLQPSGVQLDGDFKYLSRNLRWLCWNEFPLTLMPTNFYQRNLVSIQLENNNI 486

Query: 422 GELWKGIK-HLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
              + G +  L+ LK + LSHS  L++ PDF+  PNLEKLIL+ C RL E+  ++   +K
Sbjct: 487 NFFFSGNRCRLENLKFLNLSHSHCLVQTPDFSHMPNLEKLILKDCPRLSEVSHTIGHLHK 546

Query: 481 LIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG 529
           ++I+N+KDCTS                 L++LP TI  LK L TL +SG
Sbjct: 547 VLIINLKDCTS-----------------LRNLPRTIYSLKSLKTLILSG 578



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 3/95 (3%)

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFL-DGTSIKEVPSSIELLTKLELLNLSDC 648
           L+ L+ L LS    L + P+    M +L +L L D   + EV  +I  L K+ ++NL DC
Sbjct: 497 LENLKFLNLSHSHCLVQTPDFSH-MPNLEKLILKDCPRLSEVSHTIGHLHKVLIINLKDC 555

Query: 649 KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLG 683
            +L  LP +I +LKSLKTL LSGC  ++ + E LG
Sbjct: 556 TSLRNLPRTIYSLKSLKTLILSGCLIIDKL-EGLG 589


>gi|357468515|ref|XP_003604542.1| Resistance protein [Medicago truncatula]
 gi|355505597|gb|AES86739.1| Resistance protein [Medicago truncatula]
          Length = 1088

 Score =  275 bits (703), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 204/576 (35%), Positives = 307/576 (53%), Gaps = 44/576 (7%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLK 78
           VR+IGI GMGG+GKTTIA  V++    E+E   FL+ V E S + G+  L+ +L S LL 
Sbjct: 284 VRVIGIWGMGGIGKTTIAEEVFNRSCSEYEGFCFLEKVSEESGRHGITFLKEKLFSTLL- 342

Query: 79  LADNSIWNVFDGIDMLGSRL-QRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSR 137
            A++   N  +G+     R+  R KVL+V+DDV +  Q++ L G  +WF S SRII+   
Sbjct: 343 -AEDVKINSPNGLSNYIQRMIGRMKVLIVLDDVKEEGQIEMLFGTLDWFRSDSRIILI-- 399

Query: 138 DEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLAL 197
                      ++Y+   L   EAL+LF++ AFK      E  +LS R++ YA G+PL +
Sbjct: 400 -----------DIYEVGVLKPSEALELFHLNAFKQSHLEMEYYELSKRVVAYAKGIPLGV 448

Query: 198 EVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGND 257
           +VL   L G+  + W S L++L+  P  ++ D++++S+D L  LE+K FLDI      +D
Sbjct: 449 KVLAHLLRGKVKEVWESQLDKLKKLPSKKVYDVMRLSYDDLDRLEQKYFLDIT----ESD 504

Query: 258 RDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQELGQQIVQRQSPEELGK 316
              V            +G+  L +K LIT+   N + MHD+LQE+G+++V+++S E+  K
Sbjct: 505 NSVV------------VGLERLKDKALITISKYNVVSMHDILQEMGREVVRQESSEDPSK 552

Query: 317 RSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKIC-- 374
           RSRLW  +++C+VL    GT+ +  I +D         L  S   F+KMTNLR L     
Sbjct: 553 RSRLWDPDDICYVLKNDKGTDAIRSIRVDLSSFRK---LKLSPHVFAKMTNLRYLDFIGK 609

Query: 375 -NLQL-PNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLD 432
            +L+L P GL+     LR + W  YPLK  P        + +   +SR+  LW G++ L 
Sbjct: 610 YDLELLPQGLQSFPTDLRYICWIHYPLKSFPKKFSGKNLVILDFSHSRVENLWCGVQDLV 669

Query: 433 KLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSL 492
            LK + L+ S  L  +PDF+ A NL+ L +  C  L  +HPS+    KL+ L++  C SL
Sbjct: 670 NLKEVRLTSSRFLKELPDFSKATNLKVLNITDCLSLESVHPSIFSLEKLVQLDLSHCFSL 729

Query: 493 ITLPGKILMKSLEKLNLK---SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSEL 549
            T      + SL  LNL    SL T       L  LD++ D+   E P +      L  L
Sbjct: 730 TTFTSNSHLSSLLYLNLGSCISLRTFSVTTNNLIKLDLT-DIGINELPSLFRCQSKLEIL 788

Query: 550 HLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPV 585
            L  + I  +P SI+ L+ L  L+++ C  L  LPV
Sbjct: 789 VLRKSEIEIIPSSIQNLTRLRKLDIRYCLKLLALPV 824



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 101/415 (24%), Positives = 177/415 (42%), Gaps = 90/415 (21%)

Query: 498 KILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVE----HMEHLSELHLEG 553
           ++ + S  KL L   P   + +  L  LD  G       P+ ++     + ++  +H   
Sbjct: 579 RVDLSSFRKLKLS--PHVFAKMTNLRYLDFIGKYDLELLPQGLQSFPTDLRYICWIHY-- 634

Query: 554 TAIRGLPLSIELLSG--LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIV 611
             ++  P   +  SG  LV+L+  + R +E L   V +L  L+ ++L+    LK+ P+  
Sbjct: 635 -PLKSFP---KKFSGKNLVILDFSHSR-VENLWCGVQDLVNLKEVRLTSSRFLKELPDFS 689

Query: 612 RSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSG 671
           ++                        T L++LN++DC +L  +  SI +L+ L  L+LS 
Sbjct: 690 KA------------------------TNLKVLNITDCLSLESVHPSIFSLEKLVQLDLSH 725

Query: 672 CFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLR 731
           CF L         + SL  L++ G+ +   T  +S    NL+                  
Sbjct: 726 CFSLTTFTSN-SHLSSLLYLNL-GSCISLRT--FSVTTNNLI------------------ 763

Query: 732 KLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQS 791
           KL+LTD  + E  LPS       L+ L L K+    +P+SI +L++L  +++  C +L +
Sbjct: 764 KLDLTDIGINE--LPSLFRCQSKLEILVLRKSEIEIIPSSIQNLTRLRKLDIRYCLKLLA 821

Query: 792 LPQLPPNIRQVRVNGCASLVTLL------DALKLCKSDSTMIACLD----SLKLLGNK-- 839
           LP LP ++  + V  C SL T+L      +  K  K       C +    SL  +G    
Sbjct: 822 LPVLPLSVETLLVE-CISLKTVLFPSTISEQFKENKKRIEFWNCFNLDEHSLVNIGFNMK 880

Query: 840 ----SLAFSML-----REYLEAVSNTRQHLS-----VVVPGSEIPEWFMYQNEGS 880
                 A+  L      +Y+++ ++   + S      V PGS +PEW  Y+ E +
Sbjct: 881 INLIKFAYQHLLTLEHDDYVDSYADYEYNHSSYQALYVYPGSSVPEWLEYKTESN 935


>gi|334183385|ref|NP_001185252.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332195282|gb|AEE33403.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1117

 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 219/696 (31%), Positives = 357/696 (51%), Gaps = 63/696 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++    ++  L+D  +  V+++GI G  G+GK+TIA  ++  +S+ F+ + F+DN+RE S
Sbjct: 189 LNDHLREMESLLDLKNDGVKIVGISGPAGIGKSTIATALHGRLSNMFQRTCFVDNLRE-S 247

Query: 61  SKGGLVSLQRQLLSQLLKLAD--NSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            K GL   + +L  Q   LA   N        + ++  RL   +VL+++DDV  + QL++
Sbjct: 248 YKIGLDEYRLKLHLQQQLLAYVLNQDKIRVGHLSVMKERLDDLRVLIILDDVEHLYQLEA 307

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           LA  R WFG GSR+I+T+ +  +L  HG+ ++Y     +  EAL +F + AF+   P   
Sbjct: 308 LADIR-WFGPGSRVIVTTENREILLQHGIKDIYHVGFPSEGEALMIFCLSAFRQPSPPYG 366

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
            ++L+  +    G LPL L VLG+ L G+S  +W   L RL+      I  +L++ ++ L
Sbjct: 367 FLKLTYEVASICGNLPLGLHVLGTLLWGKSQADWIEELPRLKDCLDGRIESVLKVGYESL 426

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPV-IGIRVLIEKCLITV---HN--NTL 292
            E ++ +FL IA +F  +  DYVT+ LE      V +G++ L  +CLI +   HN  + +
Sbjct: 427 YEKDQALFLLIAVYFNYDYVDYVTSMLENTNVLDVRLGLKKLANRCLIQIDIDHNRKSRV 486

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            M+ LLQ + ++++ +Q   ++ KR  L   +++C+VL E+ G     G+ LD    +  
Sbjct: 487 VMNRLLQVMAREVISKQ---KISKRKILEDPQDICYVLEEAKGKGSALGLSLDVAEIKE- 542

Query: 353 VYLCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYP---LKF 401
             L  + KAF KM NL +LK+ N        L +P  +E L + +RLL W  YP    +F
Sbjct: 543 --LVINKKAFKKMCNLLILKVFNGTDPRDSKLHVPEEME-LPSSIRLLHWEAYPRKSFRF 599

Query: 402 LPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLI 461
            P NL     + + M YS + +LWKG + L  LK M L  S  L  +PD + A NLE+L 
Sbjct: 600 GPENL-----VTLNMEYSELEKLWKGTQPLANLKEMNLCGSSCLKELPDLSKAANLERLD 654

Query: 462 LEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKC 521
           +  C  L EI  S+   +K++ L+M+ C SL  +P  I + SL+ +N+   P        
Sbjct: 655 VAECNALVEIPSSVANLHKIVNLHMESCESLEVIPTLINLASLKIINIHDCP-------- 706

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
                     + + FP++   +E   EL +E T ++ LP S    +G+  L + + R+L+
Sbjct: 707 ----------RLKSFPDVPTSLE---ELVIEKTGVQELPASFRHCTGVTTLYICSNRNLK 753

Query: 582 ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKL 640
                +     LR L LS C        +  S+KDL  L +L  +  K + S  EL   L
Sbjct: 754 TFSTHLP--MGLRKLDLSNCG----IEWVTDSIKDLHNLYYLKLSGCKRLVSLPELPCSL 807

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
           E L   DC +L R+  S+    +    N   CF L+
Sbjct: 808 ECLFAEDCTSLERVSDSLNIPNA--QFNFIKCFTLD 841



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 155/325 (47%), Gaps = 52/325 (16%)

Query: 602 SKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           S+L+K  +  + + +L E+ L G+S +KE+P  +     LE L++++C  LV +PSS+  
Sbjct: 612 SELEKLWKGTQPLANLKEMNLCGSSCLKELPD-LSKAANLERLDVAECNALVEIPSSVAN 670

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINL----MRKS 716
           L  +  L++  C  LE +P TL  + SL+ ++I     P   S +  +P +L    + K+
Sbjct: 671 LHKIVNLHMESCESLEVIP-TLINLASLKIINIHD--CPRLKS-FPDVPTSLEELVIEKT 726

Query: 717 VALKLPS----LSG-----LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS 767
              +LP+     +G     +CS R L     +L  G           L++L LS      
Sbjct: 727 GVQELPASFRHCTGVTTLYICSNRNLKTFSTHLPMG-----------LRKLDLSNCGIEW 775

Query: 768 LPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMI 827
           +  SI  L  L  ++L  CKRL SLP+LP ++  +    C SL  + D+L +  +    I
Sbjct: 776 VTDSIKDLHNLYYLKLSGCKRLVSLPELPCSLECLFAEDCTSLERVSDSLNIPNAQFNFI 835

Query: 828 ACLDSLKLLGNKSLAFSMLREYLEA-VSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTR 886
            C             F++ RE   A +  +  H +V++P  E+ E   Y+  G+ +T+  
Sbjct: 836 KC-------------FTLDREARRAIIQQSFVHGNVILPAREVLEEVDYRARGNCLTI-- 880

Query: 887 PSNLYNKKKLVGYAICCVFHVLKNS 911
           P + +N+ K+      CV  V+ +S
Sbjct: 881 PPSAFNRFKV------CVVLVIGDS 899


>gi|359493295|ref|XP_002273513.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 577

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 159/372 (42%), Positives = 242/372 (65%), Gaps = 5/372 (1%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++SR E++  L+   S+DVRMIGI G+ G+GKTT+A+ +Y+ I+H+FE + FL NV E+ 
Sbjct: 193 INSRLEEMSSLLCMESNDVRMIGIHGIAGIGKTTLAKGIYNQIAHQFEGASFLSNVAEVK 252

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
              G + LQRQLL+ +L      I N+ +GI ++   L  +KVL+++DDV  + QL+ LA
Sbjct: 253 EHRGSLKLQRQLLADILGEKIARISNIDEGISLIKKTLCSRKVLIILDDVSALTQLEFLA 312

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
           G+R WFGSGSRIIITSR++HLL    VD +Y+   L  +EA +LF++ AF+         
Sbjct: 313 GSRHWFGSGSRIIITSRNKHLLDVLEVDGLYEVQKLKSEEAFKLFSLYAFEADHD-DGFW 371

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS R + Y  GLPLA++V+G +L  ++  EW   L +L       +  +L++S+D L+ 
Sbjct: 372 ELSGRALNYCDGLPLAVKVVGGYLRNKTELEWEDELLKLTTVGQITVQYVLRLSYDRLEH 431

Query: 241 LEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQE 300
            EK +FLDIACFF+G D D V   L+ C F   IG++VL +   I++ +N + MH L+Q+
Sbjct: 432 TEKDLFLDIACFFRGKDSDSVGRILDSCNF-SAIGMKVLKDCSFISILDNKIEMHGLMQQ 490

Query: 301 LGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAK 360
           +  +I++R+SP + G+RSRLW  E+V  VLT+ TGT+ +EGI  D      E+ +  +++
Sbjct: 491 MEWEIIRRESPGQPGQRSRLWNPEDVHAVLTQKTGTKAIEGISFD-VSASKEIQI--TSE 547

Query: 361 AFSKMTNLRLLK 372
           A  KMTNLRLL+
Sbjct: 548 ALKKMTNLRLLR 559


>gi|9954759|gb|AAG09110.1|AC009323_21 Putative disease resistance protein - partial protein [Arabidopsis
           thaliana]
          Length = 889

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 219/696 (31%), Positives = 357/696 (51%), Gaps = 63/696 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++    ++  L+D  +  V+++GI G  G+GK+TIA  ++  +S+ F+ + F+DN+RE S
Sbjct: 189 LNDHLREMESLLDLKNDGVKIVGISGPAGIGKSTIATALHGRLSNMFQRTCFVDNLRE-S 247

Query: 61  SKGGLVSLQRQLLSQLLKLAD--NSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            K GL   + +L  Q   LA   N        + ++  RL   +VL+++DDV  + QL++
Sbjct: 248 YKIGLDEYRLKLHLQQQLLAYVLNQDKIRVGHLSVMKERLDDLRVLIILDDVEHLYQLEA 307

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           LA  R WFG GSR+I+T+ +  +L  HG+ ++Y     +  EAL +F + AF+   P   
Sbjct: 308 LADIR-WFGPGSRVIVTTENREILLQHGIKDIYHVGFPSEGEALMIFCLSAFRQPSPPYG 366

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
            ++L+  +    G LPL L VLG+ L G+S  +W   L RL+      I  +L++ ++ L
Sbjct: 367 FLKLTYEVASICGNLPLGLHVLGTLLWGKSQADWIEELPRLKDCLDGRIESVLKVGYESL 426

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPV-IGIRVLIEKCLITV---HN--NTL 292
            E ++ +FL IA +F  +  DYVT+ LE      V +G++ L  +CLI +   HN  + +
Sbjct: 427 YEKDQALFLLIAVYFNYDYVDYVTSMLENTNVLDVRLGLKKLANRCLIQIDIDHNRKSRV 486

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            M+ LLQ + ++++ +Q   ++ KR  L   +++C+VL E+ G     G+ LD    +  
Sbjct: 487 VMNRLLQVMAREVISKQ---KISKRKILEDPQDICYVLEEAKGKGSALGLSLDVAEIKE- 542

Query: 353 VYLCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYP---LKF 401
             L  + KAF KM NL +LK+ N        L +P  +E L + +RLL W  YP    +F
Sbjct: 543 --LVINKKAFKKMCNLLILKVFNGTDPRDSKLHVPEEME-LPSSIRLLHWEAYPRKSFRF 599

Query: 402 LPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLI 461
            P NL     + + M YS + +LWKG + L  LK M L  S  L  +PD + A NLE+L 
Sbjct: 600 GPENL-----VTLNMEYSELEKLWKGTQPLANLKEMNLCGSSCLKELPDLSKAANLERLD 654

Query: 462 LEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKC 521
           +  C  L EI  S+   +K++ L+M+ C SL  +P  I + SL+ +N+   P        
Sbjct: 655 VAECNALVEIPSSVANLHKIVNLHMESCESLEVIPTLINLASLKIINIHDCP-------- 706

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
                     + + FP++   +E   EL +E T ++ LP S    +G+  L + + R+L+
Sbjct: 707 ----------RLKSFPDVPTSLE---ELVIEKTGVQELPASFRHCTGVTTLYICSNRNLK 753

Query: 582 ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKL 640
                +     LR L LS C        +  S+KDL  L +L  +  K + S  EL   L
Sbjct: 754 TFSTHLP--MGLRKLDLSNCG----IEWVTDSIKDLHNLYYLKLSGCKRLVSLPELPCSL 807

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
           E L   DC +L R+  S+    +    N   CF L+
Sbjct: 808 ECLFAEDCTSLERVSDSLNIPNA--QFNFIKCFTLD 841



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 147/304 (48%), Gaps = 36/304 (11%)

Query: 602 SKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           S+L+K  +  + + +L E+ L G+S +KE+P  +     LE L++++C  LV +PSS+  
Sbjct: 612 SELEKLWKGTQPLANLKEMNLCGSSCLKELPD-LSKAANLERLDVAECNALVEIPSSVAN 670

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINL----MRKS 716
           L  +  L++  C  LE +P TL  + SL+ ++I     P   S +  +P +L    + K+
Sbjct: 671 LHKIVNLHMESCESLEVIP-TLINLASLKIINIHD--CPRLKS-FPDVPTSLEELVIEKT 726

Query: 717 VALKLPS----LSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSI 772
              +LP+     +G+ +L   +  +       LP        L++L LS      +  SI
Sbjct: 727 GVQELPASFRHCTGVTTLYICSNRNLKTFSTHLP------MGLRKLDLSNCGIEWVTDSI 780

Query: 773 THLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDS 832
             L  L  ++L  CKRL SLP+LP ++  +    C SL  + D+L +  +    I C   
Sbjct: 781 KDLHNLYYLKLSGCKRLVSLPELPCSLECLFAEDCTSLERVSDSLNIPNAQFNFIKC--- 837

Query: 833 LKLLGNKSLAFSMLREYLEA-VSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLY 891
                     F++ RE   A +  +  H +V++P  E+ E   Y+  G+ +T+  P + +
Sbjct: 838 ----------FTLDREARRAIIQQSFVHGNVILPAREVLEEVDYRARGNCLTI--PPSAF 885

Query: 892 NKKK 895
           N+ K
Sbjct: 886 NRFK 889


>gi|15223551|ref|NP_176044.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12323030|gb|AAG51507.1|AC058785_10 disease resistance protein, putative [Arabidopsis thaliana]
 gi|332195281|gb|AEE33402.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 897

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 219/696 (31%), Positives = 357/696 (51%), Gaps = 63/696 (9%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++    ++  L+D  +  V+++GI G  G+GK+TIA  ++  +S+ F+ + F+DN+RE S
Sbjct: 189 LNDHLREMESLLDLKNDGVKIVGISGPAGIGKSTIATALHGRLSNMFQRTCFVDNLRE-S 247

Query: 61  SKGGLVSLQRQLLSQLLKLAD--NSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
            K GL   + +L  Q   LA   N        + ++  RL   +VL+++DDV  + QL++
Sbjct: 248 YKIGLDEYRLKLHLQQQLLAYVLNQDKIRVGHLSVMKERLDDLRVLIILDDVEHLYQLEA 307

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           LA  R WFG GSR+I+T+ +  +L  HG+ ++Y     +  EAL +F + AF+   P   
Sbjct: 308 LADIR-WFGPGSRVIVTTENREILLQHGIKDIYHVGFPSEGEALMIFCLSAFRQPSPPYG 366

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGL 238
            ++L+  +    G LPL L VLG+ L G+S  +W   L RL+      I  +L++ ++ L
Sbjct: 367 FLKLTYEVASICGNLPLGLHVLGTLLWGKSQADWIEELPRLKDCLDGRIESVLKVGYESL 426

Query: 239 QELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPV-IGIRVLIEKCLITV---HN--NTL 292
            E ++ +FL IA +F  +  DYVT+ LE      V +G++ L  +CLI +   HN  + +
Sbjct: 427 YEKDQALFLLIAVYFNYDYVDYVTSMLENTNVLDVRLGLKKLANRCLIQIDIDHNRKSRV 486

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            M+ LLQ + ++++ +Q   ++ KR  L   +++C+VL E+ G     G+ LD    +  
Sbjct: 487 VMNRLLQVMAREVISKQ---KISKRKILEDPQDICYVLEEAKGKGSALGLSLDVAEIKE- 542

Query: 353 VYLCASAKAFSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYP---LKF 401
             L  + KAF KM NL +LK+ N        L +P  +E L + +RLL W  YP    +F
Sbjct: 543 --LVINKKAFKKMCNLLILKVFNGTDPRDSKLHVPEEME-LPSSIRLLHWEAYPRKSFRF 599

Query: 402 LPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLI 461
            P NL     + + M YS + +LWKG + L  LK M L  S  L  +PD + A NLE+L 
Sbjct: 600 GPENL-----VTLNMEYSELEKLWKGTQPLANLKEMNLCGSSCLKELPDLSKAANLERLD 654

Query: 462 LEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKC 521
           +  C  L EI  S+   +K++ L+M+ C SL  +P  I + SL+ +N+   P        
Sbjct: 655 VAECNALVEIPSSVANLHKIVNLHMESCESLEVIPTLINLASLKIINIHDCP-------- 706

Query: 522 LSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLE 581
                     + + FP++   +E   EL +E T ++ LP S    +G+  L + + R+L+
Sbjct: 707 ----------RLKSFPDVPTSLE---ELVIEKTGVQELPASFRHCTGVTTLYICSNRNLK 753

Query: 582 ILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSEL-FLDGTSIKEVPSSIELLTKL 640
                +     LR L LS C        +  S+KDL  L +L  +  K + S  EL   L
Sbjct: 754 TFSTHLP--MGLRKLDLSNCG----IEWVTDSIKDLHNLYYLKLSGCKRLVSLPELPCSL 807

Query: 641 ELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLE 676
           E L   DC +L R+  S+    +    N   CF L+
Sbjct: 808 ECLFAEDCTSLERVSDSLNIPNA--QFNFIKCFTLD 841



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 152/321 (47%), Gaps = 51/321 (15%)

Query: 602 SKLKKFPEIVRSMKDLSELFLDGTS-IKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIA 660
           S+L+K  +  + + +L E+ L G+S +KE+P  +     LE L++++C  LV +PSS+  
Sbjct: 612 SELEKLWKGTQPLANLKEMNLCGSSCLKELPD-LSKAANLERLDVAECNALVEIPSSVAN 670

Query: 661 LKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINL----MRKS 716
           L  +  L++  C  LE +P TL  + SL+ ++I     P   S +  +P +L    + K+
Sbjct: 671 LHKIVNLHMESCESLEVIP-TLINLASLKIINIHDC--PRLKS-FPDVPTSLEELVIEKT 726

Query: 717 VALKLPS----LSG-----LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVS 767
              +LP+     +G     +CS R L     +L  G           L++L LS      
Sbjct: 727 GVQELPASFRHCTGVTTLYICSNRNLKTFSTHLPMG-----------LRKLDLSNCGIEW 775

Query: 768 LPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMI 827
           +  SI  L  L  ++L  CKRL SLP+LP ++  +    C SL  + D+L +  +    I
Sbjct: 776 VTDSIKDLHNLYYLKLSGCKRLVSLPELPCSLECLFAEDCTSLERVSDSLNIPNAQFNFI 835

Query: 828 ACLDSLKLLGNKSLAFSMLREYLEA-VSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTR 886
            C             F++ RE   A +  +  H +V++P  E+ E   Y+  G+ +T+  
Sbjct: 836 KC-------------FTLDREARRAIIQQSFVHGNVILPAREVLEEVDYRARGNCLTI-- 880

Query: 887 PSNLYNKKKLVGYAICCVFHV 907
           P + +N+     + +C V  +
Sbjct: 881 PPSAFNR-----FKVCVVLSI 896


>gi|224144411|ref|XP_002325281.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|224145731|ref|XP_002325746.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862156|gb|EEE99662.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862621|gb|EEF00128.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 526

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 148/336 (44%), Positives = 223/336 (66%), Gaps = 6/336 (1%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           ++SR + +  L+   S+DVR++G+ GM G+GKTTIA+ V++ + H FE S F+ NV+E +
Sbjct: 191 IESRVDYIIDLLSIHSNDVRVVGVYGMPGIGKTTIAKAVFNQLCHGFEGSSFISNVKEKT 250

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
            +     LQ QLL  +LK     I NV  G++++  R + K+VL+V+DD   +KQL++L 
Sbjct: 251 VE----QLQEQLLCDILKPNTWKIDNVSKGVNLMKDRFRNKRVLVVLDDFDQLKQLEALV 306

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECV 180
             R  FG GSRI+IT+RDEHLL    VD  Y    L+  E+LQLF++ AFK   P ++ V
Sbjct: 307 RERNCFGPGSRIVITTRDEHLLTQIEVDGKYHVKELHQHESLQLFSLHAFKDTHPEEDYV 366

Query: 181 QLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQE 240
           +LS  I+ YAGG+PLALEVLGS+L  R++  W+S +++L   P  +I   L+ISFD L +
Sbjct: 367 ELSNAIVDYAGGVPLALEVLGSYLFRRNISVWKSAIKKLRKIPNRQIQKTLRISFDTLDD 426

Query: 241 LE-KKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLL 298
            + K +FLDIACFF G D++YV   L+G GF P IGI +LI++ L+++++ N L MHDL+
Sbjct: 427 DKVKAMFLDIACFFIGWDKEYVVEILDGRGFFPDIGIDILIQRSLLSINDENELNMHDLI 486

Query: 299 QELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTEST 334
           +++G++I +  S +  GKR+R+W  E+   VL   T
Sbjct: 487 RDMGREIAREVSYDHPGKRNRIWLLEDALDVLNNQT 522


>gi|15242570|ref|NP_198826.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007127|gb|AED94510.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1017

 Score =  273 bits (698), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 268/834 (32%), Positives = 418/834 (50%), Gaps = 81/834 (9%)

Query: 1   MDSRCEKLRFL--MDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE 58
           +D+  + L+ L  MDS + +VRMIGI GMGG+GKTTIA+ +YD +S +F AS F  +++ 
Sbjct: 188 VDTHLQGLKSLLDMDSNNDEVRMIGIWGMGGIGKTTIAKCLYDQLSSQFTASYFTQDIKG 247

Query: 59  ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQS 118
           I  +  L+ LQ +LL   L   D   W+V  G +++ +RL   KVLLV+D V  + Q+ +
Sbjct: 248 IHKELDLLHLQNRLLYNTLG-DDIMPWSVEAGREVIAARLGNHKVLLVLDGVDKLVQIHA 306

Query: 119 LAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ- 177
           LA    WFG  SRIIIT+RD+ LL + GV  +Y    L+  ++LQ+F   AF+   P   
Sbjct: 307 LAKETRWFGRQSRIIITTRDKGLLNSCGVKTIYDVKCLDDKDSLQMFKQIAFEGGSPPSV 366

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGR--SVDEWRSTLERLEIEPPSEILDILQISF 235
           +  QLS R  R A GLP AL+    FL GR  S +EW   +  LE  P   I++IL+IS+
Sbjct: 367 DFEQLSIRAARLAHGLPSALQAYALFLRGRANSPEEWEEAVCGLESTPDENIMEILKISY 426

Query: 236 DGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNN-TLWM 294
           +GL +  +  FL +AC F G+    VT+ L+       + +RVL EK LI + +N  + +
Sbjct: 427 EGLAKAHQNAFLHVACLFNGDTFRRVTSLLDVSRMESNLWMRVLAEKSLINITSNGYVTL 486

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVY 354
           H L++++G++I        +    +   + E  H   ++ G    E I L    H  E+ 
Sbjct: 487 HKLVEQMGREI--------MLASGKFIGDPETIH---DTLGMGQTESISL----HICEM- 530

Query: 355 LCASAKA---FSKMTNLRLLKICN--------LQLPNGLEYLSNRLRLLGWRGYPLKFLP 403
            CA + A   FS+M  LR LK+          LQ+    EY S    LL W  +PL   P
Sbjct: 531 TCAFSMATGVFSRMYKLRFLKVYKHVNERESMLQVIPEDEYPSINCLLLHWDAFPLSKFP 590

Query: 404 SNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
                   +E+ + +S +  LW G+     L+ + ++ S+NL ++PD + A  L++L+LE
Sbjct: 591 LRFNTYCLVELNLRHSNLETLWSGVLKFGHLRKLDVTGSKNLKQLPDLSCAEELDELLLE 650

Query: 464 GCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLS 523
            C RL  I  S+   + L  LN+          G ++ K  +   +  L  T S    L 
Sbjct: 651 QCKRLKGIPESIAERSTLGRLNLSYYGGAKNPMGVVIQKVSQTQRITLLFPTSSVEMQLM 710

Query: 524 TLDVSGDLKFREFPEIVEHMEHLS-----ELHLEGT-AIRGLPLSIELLSGLVLLNLKNC 577
            + ++GD++FR F +   + E+ S     ++H   T ++   P  I  L+    LN++  
Sbjct: 711 NISITGDIRFRVFADFEGYAEYFSFSTEQKIHATRTVSVHQAPRLISELNKSTTLNIRRF 770

Query: 578 RSLEI-LPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIEL 636
              E   PVT                 L  FP+I      L +L L   +I+++   I  
Sbjct: 771 SYKENGRPVT-----------------LHSFPDI----PGLKQLELVNLNIQKLSDGIGH 809

Query: 637 LTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
              LE L+LS   +   LP  +  L  LKTL L  C KL+ +PE L Q++SL        
Sbjct: 810 FEFLENLDLSG-NDFENLPEDMNRLSRLKTLCLRNCSKLKELPE-LTQVQSL-------- 859

Query: 697 AVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLK 756
            + +  +  S + I     S A + PSL    SL +L L +C  ++ +L   + +   L 
Sbjct: 860 TLSNCKNLRSLVKI-----SDASQDPSLY---SLLELCLDNCKNVK-SLSDQLSHFPKLA 910

Query: 757 ELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL 810
            L LS + F  LP+SI  L+ L+ + L +CK+L+SL +LP +++ +   GC SL
Sbjct: 911 YLDLSSHDFKKLPSSIRDLTSLVTLCLNNCKKLKSLEELPLSLQFLDAKGCDSL 964


>gi|224146780|ref|XP_002336335.1| predicted protein [Populus trichocarpa]
 gi|222834747|gb|EEE73210.1| predicted protein [Populus trichocarpa]
          Length = 540

 Score =  273 bits (698), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 207/553 (37%), Positives = 286/553 (51%), Gaps = 78/553 (14%)

Query: 569  LVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIK 628
            L+ +NL +C SL  LP  +S L  L  L LSGCSKLK+FPEI  + K L +L LD TSI+
Sbjct: 18   LIYVNLMDCESLTSLPSRISGLNLLEELHLSGCSKLKEFPEIEGNKKCLRKLCLDQTSIE 77

Query: 629  EVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
            E+P SI+ L  L  L+L DCK L  LPSSI  LKSLKTL+LSGC +LEN+PE  GQ+E L
Sbjct: 78   ELPPSIQYLVGLISLSLKDCKKLSCLPSSINGLKSLKTLHLSGCSELENLPENFGQLECL 137

Query: 689  EELDISGTAVP-----------------HSTSWYSYIPINLMRKSVALKLPSLSG----- 726
             ELD+SGTA+                  H  +  S    N+ ++   L  P + G     
Sbjct: 138  NELDVSGTAIREPPVSIFSLKNLKILSFHGCAESSRSTTNIWQR---LMFPLMPGKRANS 194

Query: 727  ----------LCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLS 776
                      L SL +L L++CNL EGA+P+DIG L SL++L LS+N FVSLPTSI  LS
Sbjct: 195  TSLVLPSLSGLSSLTRLGLSNCNLGEGAVPNDIGYLSSLRQLNLSRNKFVSLPTSIDQLS 254

Query: 777  KLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLL 836
             L  + +EDCK LQSLPQLPPN+  +RVNGC SL  +  +    K +      ++  +L 
Sbjct: 255  GLKFLYMEDCKMLQSLPQLPPNLELLRVNGCTSLEKMQFSSNPYKFNCLSFCFINCWRLS 314

Query: 837  GN---KSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNK 893
             +    ++  ++LR+  +   N  +  SV +PGSEIP WF +Q+EGSS++V  P +    
Sbjct: 315  ESDCWNNMFHTLLRKCFQGPPNLIEVFSVFIPGSEIPTWFSHQSEGSSVSVQTPPHSLEN 374

Query: 894  KKLVGYAICCVFHVLKNSRG----NNCFGSYPTHQLNCHIGHGIY------GIGFRDKFG 943
             + +GYA+C        +      +      P       + +G        GI  + K  
Sbjct: 375  DECLGYAVCASLEYDGCASSELLTDYWVSGVPISCFFNGVNYGSVMSYFHRGIEMQWKRD 434

Query: 944  QAGSDHLWLLYL-SRQTCYDIRLPLESNLEPFESNHVNVSFEPWLGQGLEVKMCGLHPVY 1002
               SDHLW L+  SR   +D               HV++ FE +  Q ++V  CG+ PVY
Sbjct: 435  NIPSDHLWYLFFPSRFKIFD--------------RHVSLRFETYRPQ-IKVIKCGVRPVY 479

Query: 1003 MDEVEELDQTTNQPSRFTVYNLNEFDQHFVGSKMI--VATTSKRSLTEYFGAEASGSGCC 1060
              +VE            T   ++E  Q   GS M    A   +   T   G EASGS   
Sbjct: 480  HQDVE----------NSTFEGVDECFQESGGSTMRGGGALVKRLCYTNDVG-EASGS-VS 527

Query: 1061 DDEEPQPKRFREL 1073
             DE+P  K+ +++
Sbjct: 528  SDEQPPTKKLKQI 540



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 141/331 (42%), Gaps = 54/331 (16%)

Query: 420 RIGELWKGIKHLDKLKVMILSHSENLIRMPD-FTGAPNLEKLILEGCTRLYE-------- 470
           R+ E+   I H +KL  + L   E+L  +P   +G   LE+L L GC++L E        
Sbjct: 4   RLSEVHSSIGHHNKLIYVNLMDCESLTSLPSRISGLNLLEELHLSGCSKLKEFPEIEGNK 63

Query: 471 ---------------IHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTT 515
                          + PS+     LI L++KDC                   L  LP++
Sbjct: 64  KCLRKLCLDQTSIEELPPSIQYLVGLISLSLKDCKK-----------------LSCLPSS 106

Query: 516 ISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLK 575
           I+GLK L TL +SG  +    PE    +E L+EL + GTAIR  P+SI  L  L +L+  
Sbjct: 107 INGLKSLKTLHLSGCSELENLPENFGQLECLNELDVSGTAIREPPVSIFSLKNLKILSFH 166

Query: 576 NCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKE--VPSS 633
            C         +        +     +        +  +  L+ L L   ++ E  VP+ 
Sbjct: 167 GCAESSRSTTNIWQRLMFPLMPGKRANSTSLVLPSLSGLSSLTRLGLSNCNLGEGAVPND 226

Query: 634 IELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIE------- 686
           I  L+ L  LNLS  K  V LP+SI  L  LK L +  C  L+++P+    +E       
Sbjct: 227 IGYLSSLRQLNLSRNK-FVSLPTSIDQLSGLKFLYMEDCKMLQSLPQLPPNLELLRVNGC 285

Query: 687 -SLEELDISGTAVPHSTSWYSYIPINLMRKS 716
            SLE++  S    P+  +  S+  IN  R S
Sbjct: 286 TSLEKMQFSSN--PYKFNCLSFCFINCWRLS 314


>gi|224143578|ref|XP_002336058.1| predicted protein [Populus trichocarpa]
 gi|222869691|gb|EEF06822.1| predicted protein [Populus trichocarpa]
          Length = 722

 Score =  273 bits (697), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 204/549 (37%), Positives = 290/549 (52%), Gaps = 72/549 (13%)

Query: 153 PHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEW 212
           P  LNY+EALQLF+ KA K   P  +   L  RI  +  G PLAL VL S L G+S +EW
Sbjct: 6   PDLLNYEEALQLFSSKALKNCIPTIDHRDLIKRIASHVQGNPLALIVLSSSLYGKSPEEW 65

Query: 213 RSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHP 272
            S L +L   P   I + L+IS++GL + ++ IFLDIA FF+  +++  T  L+G    P
Sbjct: 66  YSALNKLAQNP--RIENALRISYNGLYQEQQSIFLDIAHFFRKFEQNQATRILDGFYGRP 123

Query: 273 VI-GIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLT 331
           VI  I +LI+KCLIT   N L +HDLLQE+   IV+ +S +  GKRSRL    ++ HVL 
Sbjct: 124 VIFDISMLIDKCLITTSRNMLEIHDLLQEMAFSIVRAES-KFPGKRSRLCHLTDIVHVLE 182

Query: 332 ESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQL-----------PN 380
           E+ GTE +EGI LD      +++L   + AF+ M  LR +K     L           P 
Sbjct: 183 ENKGTEEIEGISLDMSRLSRQIHL--KSDAFAMMDGLRFIKFFFGHLSQDNKDKMHLPPT 240

Query: 381 GLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILS 440
           GLEYLSN+LR L W G+P K LP     +  +E+ +  S++ +LW  ++ +  ++  +LS
Sbjct: 241 GLEYLSNKLRYLHWDGFPSKSLPHVFCAEYLVELNLSRSKVEKLWTRVQDVGNVQKFVLS 300

Query: 441 HSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLP---G 497
           +S  L  +PD + A NL  L L  C  L E+  SL   +KL  L++  C +L + P    
Sbjct: 301 YSPYLTELPDLSKARNLVSLRLVDCPSLTEVPFSLQYLDKLEELDLNFCYNLRSFPMLDS 360

Query: 498 KIL--------------------MKS--LEKLNLKSLPTTISGLKCLSTLDVSGDLKFRE 535
           K+L                    MKS  LE+ ++K +P +I+    L  L + G  K  +
Sbjct: 361 KVLKVLSISRCLDMTKCPTISQNMKSLYLEETSIKEVPQSITSK--LENLGLHGCSKITK 418

Query: 536 FPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRS 595
           FPEI   ++    L+L GTAI+ +P SI+ L+ L +L+                      
Sbjct: 419 FPEISGDVK---TLYLSGTAIKEVPSSIQFLTRLCVLD---------------------- 453

Query: 596 LKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLP 655
             +SGCSKL+ FPEI   MK L +L L  T IKE+PSS + +  L  L L D   +  LP
Sbjct: 454 --MSGCSKLESFPEIAVPMKSLVDLNLSKTGIKEIPSSFKQMISLRSLGL-DGTPIEELP 510

Query: 656 SSIIALKSL 664
            SI  +K L
Sbjct: 511 LSIKDMKPL 519



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 165/368 (44%), Gaps = 44/368 (11%)

Query: 546 LSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
           L  LH +G   + LP  +     LV LNL   + +E L   V ++  ++   LS    L 
Sbjct: 249 LRYLHWDGFPSKSLP-HVFCAEYLVELNLSRSK-VEKLWTRVQDVGNVQKFVLSYSPYLT 306

Query: 606 KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLK 665
           + P++ ++   +S   +D  S+ EVP S++ L KLE L+L+ C NL   P  ++  K LK
Sbjct: 307 ELPDLSKARNLVSLRLVDCPSLTEVPFSLQYLDKLEELDLNFCYNLRSFP--MLDSKVLK 364

Query: 666 TLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLS 725
            L++S C  +   P     ++SL   + S   VP S +                      
Sbjct: 365 VLSISRCLDMTKCPTISQNMKSLYLEETSIKEVPQSIT---------------------- 402

Query: 726 GLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELED 785
               L  L L  C+ +    P   G++   K LYLS  +   +P+SI  L++L  +++  
Sbjct: 403 --SKLENLGLHGCSKI-TKFPEISGDV---KTLYLSGTAIKEVPSSIQFLTRLCVLDMSG 456

Query: 786 CKRLQSLPQLPP--------NIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLKLLG 837
           C +L+S P++          N+ +  +    S    + +L+    D T I  L  L +  
Sbjct: 457 CSKLESFPEIAVPMKSLVDLNLSKTGIKEIPSSFKQMISLRSLGLDGTPIEEL-PLSIKD 515

Query: 838 NKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLV 897
            K L  +M  +           + +V+PGSEIPEWF  +  GSS+T+  P+N +   +L 
Sbjct: 516 MKPLIAAMHLKIQSGDKIPYDRIQMVLPGSEIPEWFSDKGIGSSLTIQLPTNCH---QLK 572

Query: 898 GYAICCVF 905
           G A C VF
Sbjct: 573 GIAFCLVF 580


>gi|227438163|gb|ACP30571.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1055

 Score =  273 bits (697), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 231/755 (30%), Positives = 365/755 (48%), Gaps = 99/755 (13%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           M +  E L+ ++  GS +VRMIGI G  G+GKTTIARV ++ +S+ F+ S F+D+++  S
Sbjct: 237 MGAHWENLKSILCLGSDEVRMIGIWGPPGIGKTTIARVAFNQLSNSFQLSVFMDDLKANS 296

Query: 61  SK------GGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVK 114
           S+         + LQ+Q +SQ+    D     V     ++ +RL+ KKVL+V+D V    
Sbjct: 297 SRLCSDDYSVKLQLQQQFMSQITDHKDM----VVSHFGVVSNRLRDKKVLVVLDGVNRSV 352

Query: 115 QLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQ 174
           QL ++A    WFG GSRIIIT++D+ L + HG++ +Y+ +    DEALQ+F    F    
Sbjct: 353 QLDAMAKETWWFGPGSRIIITTQDQKLFRAHGINHIYEVNLPTNDEALQIFCTYCFGQNF 412

Query: 175 PLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQIS 234
           P     +L+  +   +G LPL L V+GS+L G S ++W ++L RL     ++I  IL+ S
Sbjct: 413 PKYGFEELAREVTSLSGELPLGLRVMGSYLRGMSKEDWTNSLPRLRDSLDTDIQSILKFS 472

Query: 235 FDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWM 294
           +D L + +K +FL IACFF       +   L     +    ++VL EK LI++ +  + M
Sbjct: 473 YDALDDEDKDLFLHIACFFSSEQIHKMEEHLAKRFLYVRQRLKVLAEKSLISIDSGRIRM 532

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLT-ESTGTELVEGIVLDNYHHENEV 353
           H LL++LG++IV +QS  E G+R  L+ + ++C VLT  +TG++ V GI  + Y    E+
Sbjct: 533 HSLLEKLGREIVCKQSIHEPGQRQFLYDKRDICEVLTGGATGSKSVIGIKFEYYRIREEI 592

Query: 354 YLCASAKAFSKMTNLRLLKICN----LQL----------------PNGLEYLSNRLRLLG 393
            +  S KAF  M+NL+ LK+C     LQ+                   LEYL  R   L 
Sbjct: 593 DI--SEKAFEGMSNLQFLKVCGFTDALQITGVSQICXSSXSYVGNATNLEYLDLR-NCLN 649

Query: 394 WRGYP-------------------LKFLPSNLQMD--KTIEIYMCYSRIGELWKGIKHLD 432
               P                   L+ LP+N+ ++    ++I  C S     +  I +  
Sbjct: 650 MVELPLSLRNLKKLKRLRLKGCSKLEVLPTNINLEYLNELDIAGCSSLDLGDFSTIGNAV 709

Query: 433 KLKVMILSHSENLIRMPDFTG-APNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTS 491
            L+ + +S    L+ +P F G A NLE L+L  C++L E+   +    KL  L ++ C  
Sbjct: 710 NLRELNISSLPQLLEVPSFIGNATNLENLVLSSCSKLVELPLFIGNLQKLRWLRLEGCIR 769

Query: 492 LITLPGKILMKSLEKLN------LKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEH 545
           L  LP  I ++SL +LN      LKS P   + L+    L++ G     + P  +    H
Sbjct: 770 LEVLPTNINLESLLELNLSDCSMLKSFPQISTNLE---KLNLRG-TAIEQVPPSIRSWPH 825

Query: 546 LSELHLEG-TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKL 604
           L ELH+     ++  P ++E ++ L L + +    ++ +P  V  +  L    LSGC KL
Sbjct: 826 LKELHMSYFENLKEFPHALERITSLSLTDTE----IQEVPPLVKQISRLNRFFLSGCRKL 881

Query: 605 KKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSL 664
            + P I  S   +                            +DC +L  L  S      +
Sbjct: 882 VRLPPISESTHSIYA--------------------------NDCDSLEILECSFS--DQI 913

Query: 665 KTLNLSGCFKLENVPETLGQIESLEELDISGTAVP 699
           + L  + CFKL      L    S E   + G  VP
Sbjct: 914 RRLTFANCFKLNQEARDLIIQASSEHAVLPGGQVP 948



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 151/346 (43%), Gaps = 66/346 (19%)

Query: 559 LPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK--KFPEIVRSMKD 616
           LPLS+  L  L  L LK C  LE+LP  + NL+ L  L ++GCS L    F  I  ++ +
Sbjct: 653 LPLSLRNLKKLKRLRLKGCSKLEVLPTNI-NLEYLNELDIAGCSSLDLGDFSTIGNAV-N 710

Query: 617 LSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKL 675
           L EL +     + EVPS I   T LE L LS C  LV LP  I  L+ L+ L L GC +L
Sbjct: 711 LRELNISSLPQLLEVPSFIGNATNLENLVLSSCSKLVELPLFIGNLQKLRWLRLEGCIRL 770

Query: 676 ENVP-------------------ETLGQIES-LEELDISGTAVPHSTSWYSYIPINLMRK 715
           E +P                   ++  QI + LE+L++ GTA+         +P      
Sbjct: 771 EVLPTNINLESLLELNLSDCSMLKSFPQISTNLEKLNLRGTAIEQ-------VP------ 817

Query: 716 SVALKLPSLSGLCSLRKLNLTDC-NLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITH 774
                 PS+     L++L+++   NL E   P  +  + SL    L+      +P  +  
Sbjct: 818 ------PSIRSWPHLKELHMSYFENLKE--FPHALERITSLS---LTDTEIQEVPPLVKQ 866

Query: 775 LSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLK 834
           +S+L    L  C++L  LP +  +   +  N C SL  L  +        T   C     
Sbjct: 867 ISRLNRFFLSGCRKLVRLPPISESTHSIYANDCDSLEILECSFSDQIRRLTFANC----- 921

Query: 835 LLGNKSLAFSMLREYLE-AVSNTRQHLSVVVPGSEIPEWFMYQNEG 879
                   F + +E  +  +  + +H   V+PG ++P +F ++  G
Sbjct: 922 --------FKLNQEARDLIIQASSEH--AVLPGGQVPPYFTHRATG 957



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 94/197 (47%), Gaps = 47/197 (23%)

Query: 638 TKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTA 697
           T LE L+L +C N+V LP S+  LK LK L L GC KLE +P  +  +E L ELDI+G +
Sbjct: 637 TNLEYLDLRNCLNMVELPLSLRNLKKLKRLRLKGCSKLEVLPTNI-NLEYLNELDIAGCS 695

Query: 698 VPHSTSWYSYIPINLMRKSVAL-KLPSLSGLCSLRKLNLTDC-NLMEGALPSDIGNLCSL 755
                             S+ L    ++    +LR+LN++    L+E  +PS IGN  +L
Sbjct: 696 ------------------SLDLGDFSTIGNAVNLRELNISSLPQLLE--VPSFIGNATNL 735

Query: 756 KELYLSKNS-FVSLPTSITHLSKLLNIELE-----------------------DCKRLQS 791
           + L LS  S  V LP  I +L KL  + LE                       DC  L+S
Sbjct: 736 ENLVLSSCSKLVELPLFIGNLQKLRWLRLEGCIRLEVLPTNINLESLLELNLSDCSMLKS 795

Query: 792 LPQLPPNIRQVRVNGCA 808
            PQ+  N+ ++ + G A
Sbjct: 796 FPQISTNLEKLNLRGTA 812


>gi|224136161|ref|XP_002327396.1| NBS resistance protein [Populus trichocarpa]
 gi|222835766|gb|EEE74201.1| NBS resistance protein [Populus trichocarpa]
          Length = 271

 Score =  272 bits (696), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 145/275 (52%), Positives = 192/275 (69%), Gaps = 8/275 (2%)

Query: 28  GGLGKTTIARVVYDLISHEFEASGFLDNVREI-SSKGGLVSLQRQLLSQL---LKLADNS 83
           GG+GKTT+ARV+YD I  +F  S FL NVRE+ + K GL  LQ QLLS++   L  A +S
Sbjct: 1   GGMGKTTVARVLYDRIRWQFGGSCFLANVREVFAEKDGLCRLQEQLLSEISMELPTARDS 60

Query: 84  IWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLK 143
                  ID++  RL+ KKVLL++DDV D +QLQ LA     FG GSRIIITSR++H+L 
Sbjct: 61  SRR----IDLIKRRLRLKKVLLILDDVDDEEQLQMLAAEHGTFGPGSRIIITSRNKHVLD 116

Query: 144 THGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSF 203
           +HGV  +Y+   LN  +AL LF+ KAFK  QP ++  +LS +++ YA GLPLALEV+GSF
Sbjct: 117 SHGVTRIYEAEKLNDKDALILFSWKAFKRDQPAEDLSELSKQVVGYANGLPLALEVIGSF 176

Query: 204 LSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTN 263
           L  R + EW+S ++R+   P  +I+D+L+ISFDGL ELEKKIFLDIACF KG  +D +T 
Sbjct: 177 LHKRGLREWKSAIDRMNDIPDRKIIDVLRISFDGLHELEKKIFLDIACFLKGMKKDRITR 236

Query: 264 FLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLL 298
            L+ CGFH  IG++ LIEK LI V  + + MH+LL
Sbjct: 237 LLDSCGFHADIGMQALIEKSLIRVSRDEIRMHNLL 271


>gi|25247229|gb|AAN73009.1| NBS-LRR resistance protein RS7-4 [Helianthus annuus]
          Length = 398

 Score =  272 bits (695), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 170/426 (39%), Positives = 246/426 (57%), Gaps = 38/426 (8%)

Query: 43  ISHEFEASGFLDNVREISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKK 102
           ISH FE    L N+RE S+K GL  LQ + LS +LK AD  + N  +G  ++  RL+ K 
Sbjct: 3   ISHRFEGHCLLQNIREESNKHGLEKLQEKFLSLILK-ADVKVGNEIEGRSIIERRLRNKS 61

Query: 103 VLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEAL 162
           VL+V+DDV D KQL++LAG+  WFG GSRIIIT+RDEHLL  H  D +Y+   L++DEA+
Sbjct: 62  VLVVLDDVDDHKQLEALAGSHAWFGKGSRIIITTRDEHLLTRHA-DMIYEVSLLSHDEAM 120

Query: 163 QLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIE 222
           +LFN  A++  +P+++   LS  ++ YA GLPLALE+LGSFL  ++ DEW+S L +L+  
Sbjct: 121 ELFNKHAYRKDKPIEDYEMLSNDVVSYASGLPLALEILGSFLYDKNKDEWKSALAKLKCI 180

Query: 223 PPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEK 282
           P  ++ + L+IS+DGL+   +KIFLDIACF++    D     L+ C  HP IG++VLI+K
Sbjct: 181 PNVKVTERLKISYDGLEPDHQKIFLDIACFWRRQHMDEAMMVLDACNLHPCIGVKVLIQK 240

Query: 283 CLITVHNNTLW-----MHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTE 337
            LI V ++        MHDL++E+   IV+   P    K SR+WKEE++           
Sbjct: 241 SLIKVSDDVFGDKIVDMHDLVEEMAHYIVRGAHPNHPEKHSRIWKEEDI----------- 289

Query: 338 LVEGIVLDNYHHENEVYLC-ASAKAFSKMTNLRLLKICNLQLPNGLEYLSN--RLRLLGW 394
                           YLC   A A    T +  L  C+  +P+  + ++N  +LR + +
Sbjct: 290 ---------------AYLCDMGADAVPMETEVEAL--CSYDVPDLSDVVANMKKLRWIRF 332

Query: 395 RGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGA 454
             Y     PSN Q  +   + +  S+  ELW G K L  LK++ L  S  LI  P+F G 
Sbjct: 333 DQYQTSSFPSNFQPTELCCLELHKSQQKELWHGYKLLPNLKILDLRRSSKLITTPNFDGL 392

Query: 455 PNLEKL 460
           P L++L
Sbjct: 393 PCLKRL 398


>gi|15223549|ref|NP_176043.1| white rust resistance 4 protein [Arabidopsis thaliana]
 gi|12323031|gb|AAG51508.1|AC058785_11 disease resistance protein [Arabidopsis thaliana]
 gi|48310570|gb|AAT41840.1| At1g56510 [Arabidopsis thaliana]
 gi|110741855|dbj|BAE98869.1| hypothetical protein [Arabidopsis thaliana]
 gi|332195280|gb|AEE33401.1| white rust resistance 4 protein [Arabidopsis thaliana]
          Length = 1007

 Score =  271 bits (694), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 204/646 (31%), Positives = 327/646 (50%), Gaps = 73/646 (11%)

Query: 11  LMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-----ISSKGGL 65
           L+D     V+M+GI G  G+GK+TIA+ ++   S  F+ + F+DN+ E         G  
Sbjct: 199 LLDLDKEGVKMVGISGPAGIGKSTIAKALHSRHSSTFQHNCFVDNLWENYKICTGEHGVK 258

Query: 66  VSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREW 125
           + L  Q +S++LK   N +      + ++  RLQ KKVL+++DDV  + QL++LA +  W
Sbjct: 259 LRLHEQFVSKILK--QNGL--ELTHLSVIKDRLQDKKVLIILDDVESLAQLETLA-DMTW 313

Query: 126 FGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSAR 185
           FG GSR+I+T+ ++ +L+ HG+ ++Y+    +  EAL +F + AFK   P    + L+  
Sbjct: 314 FGPGSRVIVTTENKEILQQHGIGDIYQVGYPSESEALTIFCLSAFKQASPPDGFMDLADE 373

Query: 186 IIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKI 245
           ++R    LPLAL VLGS L  +S  +W   L RL       I  +L++ F+ L E ++ +
Sbjct: 374 VVRICDKLPLALCVLGSSLLRKSQTDWEDELPRLR-NCLDGIESVLKVGFESLNEKDQAL 432

Query: 246 FLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNT---LWMHDLLQELG 302
           FL I  FF     D+VT  L     +  +G++ L  + LI + ++    + +H LL+ + 
Sbjct: 433 FLYITVFFNYECADHVTLMLAKSNLNVRLGLKNLANRYLIHIDHDQKKRVVVHRLLRVMA 492

Query: 303 QQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAF 362
            Q+  +Q P    K   L   E++ +VL E+TG   ++G+  D    +    L  S KAF
Sbjct: 493 IQVCTKQKP---WKSQILVDAEKIAYVLEEATGNRSIKGVSFDTAEIDE---LMISPKAF 546

Query: 363 SKMTNLRLLKICN---------LQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIE 413
            KM NL  LK+ +         L +P  +++    +RL  W  Y  K LPS+   +  +E
Sbjct: 547 EKMCNLLFLKVYDAGWHTGKRKLDIPEDIKF-PRTIRLFHWDAYSGKRLPSSFFAENLVE 605

Query: 414 IYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHP 473
           + M  S + +LW+G + L  LK + LS S  L  +PD + A NLE L +  CT L E+  
Sbjct: 606 VNMQDSELQKLWEGTQCLANLKKIDLSRSSCLTELPDLSNATNLEDLYVGSCTALVELPS 665

Query: 474 SLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKF 533
           S+   +KL  + M  C SL  +P  I + SL  LN+          KC          + 
Sbjct: 666 SIGNLHKLAHIMMYSCESLEVIPSLINLTSLTFLNMN---------KC---------SRL 707

Query: 534 REFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEI----LPVTVSN 589
           R FP+I   +E   ++ + GT +  LP S+   SGL  + +    +L+I    LPV+VS+
Sbjct: 708 RRFPDIPTSIE---DVQVTGTTLEELPASLTHCSGLQTIKISGSVNLKIFYTELPVSVSH 764

Query: 590 LK------------CLRSLK------LSGCSKLKKFPEIVRSMKDL 617
           +             C++ L       LSGC +L   PE+ RS+K L
Sbjct: 765 INISNSGIEWITEDCIKGLHNLHDLCLSGCKRLVSLPELPRSLKIL 810



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 89/365 (24%), Positives = 169/365 (46%), Gaps = 47/365 (12%)

Query: 535 EFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLR 594
           + PE ++    +   H +  + + LP S      LV +N+++   L+ L      L  L+
Sbjct: 570 DIPEDIKFPRTIRLFHWDAYSGKRLPSSF-FAENLVEVNMQDSE-LQKLWEGTQCLANLK 627

Query: 595 SLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNLVR 653
            + LS  S L + P++  +  +L +L++   T++ E+PSSI  L KL  + +  C++L  
Sbjct: 628 KIDLSRSSCLTELPDLSNAT-NLEDLYVGSCTALVELPSSIGNLHKLAHIMMYSCESLEV 686

Query: 654 LPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLM 713
           +PS +I L SL  LN++ C +L   P+      S+E++ ++GT +               
Sbjct: 687 IPS-LINLTSLTFLNMNKCSRLRRFPDI---PTSIEDVQVTGTTL--------------- 727

Query: 714 RKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTS-- 771
            + +   L   SGL +++     +  +    LP       S+  + +S NS +   T   
Sbjct: 728 -EELPASLTHCSGLQTIKISGSVNLKIFYTELP------VSVSHINIS-NSGIEWITEDC 779

Query: 772 ITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLD 831
           I  L  L ++ L  CKRL SLP+LP +++ ++ + C SL +L   L    ++     C  
Sbjct: 780 IKGLHNLHDLCLSGCKRLVSLPELPRSLKILQADDCDSLESLNGHLNTPNAELYFANC-- 837

Query: 832 SLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLY 891
             KL      A  + + ++   +        ++PG E+P  F ++  G+S+ +  P +  
Sbjct: 838 -FKLDAEARRAI-IQQSFVSGWA--------LLPGLEVPPEFGHRARGNSLII--PYSAS 885

Query: 892 NKKKL 896
           N+ K+
Sbjct: 886 NRFKV 890



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 26/211 (12%)

Query: 612 RSMKDLSELFLDGTSIKEV---PSSIELLTKLELLNLSDC-----KNLVRLPSSIIALKS 663
           RS+K +S    D   I E+   P + E +  L  L + D      K  + +P  I   ++
Sbjct: 524 RSIKGVS---FDTAEIDELMISPKAFEKMCNLLFLKVYDAGWHTGKRKLDIPEDIKFPRT 580

Query: 664 LKTLN--------LSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPINLMRK 715
           ++  +        L   F  EN+ E   Q   L++L   GT    +        I+L R 
Sbjct: 581 IRLFHWDAYSGKRLPSSFFAENLVEVNMQDSELQKL-WEGTQCLANLK-----KIDLSRS 634

Query: 716 SVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITHL 775
           S   +LP LS   +L  L +  C  +   LPS IGNL  L  + +     + +  S+ +L
Sbjct: 635 SCLTELPDLSNATNLEDLYVGSCTALV-ELPSSIGNLHKLAHIMMYSCESLEVIPSLINL 693

Query: 776 SKLLNIELEDCKRLQSLPQLPPNIRQVRVNG 806
           + L  + +  C RL+  P +P +I  V+V G
Sbjct: 694 TSLTFLNMNKCSRLRRFPDIPTSIEDVQVTG 724


>gi|13509221|emb|CAC35330.1| N1-D protein [Linum usitatissimum]
          Length = 1108

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 250/842 (29%), Positives = 419/842 (49%), Gaps = 67/842 (7%)

Query: 1    MDSRCEKLRFLM--DSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE 58
            +DSR +++  L+  DS +S+ ++IGI GMGGLGKTT+A+ VYD +S +FE   FL+N+R+
Sbjct: 214  IDSRVDEVVGLLNLDSSTSE-KIIGIHGMGGLGKTTLAKAVYDKVSTKFERCYFLENIRD 272

Query: 59   -ISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
             +S K G+  LQ +++S +LK   N   N  DGI ++  R+ R K+L+V+DDV +  Q  
Sbjct: 273  TLSEKNGVSILQNKIISGILKKDFNEAKNASDGIRIIRDRVCRHKLLIVLDDVDEKFQFD 332

Query: 118  SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
             + G    F   SR +IT+RD   L+     ++++   ++ D +L LFN  AF    P +
Sbjct: 333  EVLGKLNNFSMDSRFLITTRDARGLELLRECKMFELQEMSPDHSLTLFNKNAFGVDFPPK 392

Query: 178  ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
            +   LS   ++ A GLPL ++V+GS L       W   LE  +   P+++ + L+IS++ 
Sbjct: 393  DYAILSNEFVQAAAGLPLYIKVIGSLLFRMDKIFWEEKLEEFKKISPTKVQERLKISYNE 452

Query: 238  LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-------- 289
            L   EK+IFLDIAC+F G+ +         C F+P   IR LI++ LI            
Sbjct: 453  LTYNEKQIFLDIACYFIGSYKIEPMRMWSDCDFYPESTIRSLIQRSLIKFQRSRIKSDIL 512

Query: 290  NTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHH 349
            NT WMHD + +LG+ IV+ ++ ++  KRSR+W  ++   +L    GT+ VE + +D    
Sbjct: 513  NTFWMHDHIIDLGRAIVREENNKKPYKRSRIWSNKDAIDMLKHKKGTDCVEVLTVDMEGE 572

Query: 350  ENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMD 409
            +    L  + K   K+T LR L + N +L    + +   LR L  R +    +P+ L + 
Sbjct: 573  D----LILTNKELEKLTRLRYLSVSNARLAGDFKDVLPNLRWL--RLHSCDSVPTGLYLK 626

Query: 410  KTIEIYMCYSRIGELWKG---IKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCT 466
            K ++  +    + + WKG   +K   KLK + L    NL ++PDF+   +LE L  + C 
Sbjct: 627  KLVQFELVDCSVRDGWKGWNELKVAHKLKAVTLERCFNLNKVPDFSHCRDLEWLDFDECR 686

Query: 467  RLY-EIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKL-----NLKSLPTTISGLK 520
             +  E+        + ++++    T +    G++L  +L+ L     +LK +P  IS L 
Sbjct: 687  NMRGEVDIGNFKSLRFLLISKTKITKIKGEIGRLL--NLKYLIAGGSSLKEVPAGISKLS 744

Query: 521  CLSTLDVSGDLKFR-EFPEIVEHMEHLSELHLEGTAIRGLP-LSIELLSGLV-LLNLKNC 577
             L  L ++ +  ++ +F E++     L  L +     +  P  S+E L  L  L NL N 
Sbjct: 745  SLEFLTLALNDPYKSDFTEMLP--TSLMSLLISNDTQKSCPDTSLENLQRLPNLSNLINL 802

Query: 578  RSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIV-----RSMKDLSELFLDGTS-IKEVP 631
              L ++ V +  +  L  LK+     +++ P IV      ++  L  L ++G   IK++P
Sbjct: 803  SVLYLMDVGICEILGLGELKMLEYLSIQRAPRIVHLDGLENLVLLQHLRVEGCPIIKKLP 862

Query: 632  SSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEEL 691
            S +  LT+LELL + DC  +  +       +SL  L + GC  L  + E L  +  LE L
Sbjct: 863  SLVA-LTRLELLWIQDCPLVTEIHGVGQLWESLSDLGVVGCSALIGL-EALHSMVKLERL 920

Query: 692  DISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGN 751
             + G  +  +                    PSLS    L +L+L  C +     P D+ N
Sbjct: 921  LLVGCLLTETMP------------------PSLSMFTKLTELSL--CAMPWKQFP-DLSN 959

Query: 752  LCSLKELYLSK-NSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP--PNIRQVRVNGCA 808
            L +L+ L LS     + +P  +  L  L  + +E C+ ++ +P L     ++ + V  C 
Sbjct: 960  LKNLRVLCLSFCQELIEVP-GLDALESLEWLSMEGCRSIRKVPDLSGLKKLKTLDVESCI 1018

Query: 809  SL 810
             L
Sbjct: 1019 QL 1020


>gi|224123350|ref|XP_002319057.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222857433|gb|EEE94980.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 511

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 150/336 (44%), Positives = 220/336 (65%), Gaps = 12/336 (3%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-I 59
           +DS+ + +  ++  G+++VR++GI GM G+GKTTIA+ V++ I H+FE S  L N+RE +
Sbjct: 182 IDSQVKDIISMLCVGTNEVRIVGIYGMPGIGKTTIAKAVFNQICHQFEGSSCLLNIRERL 241

Query: 60  SSKGGLVSLQ----RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQ 115
               GL+ LQ    R      +++ D+      D  D + S+  RK+VL+++DDV  +K 
Sbjct: 242 DQHRGLLQLQQQLLRDAFKGYIRIHDD------DDEDGIKSQFCRKRVLVILDDVDQLKH 295

Query: 116 LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP 175
           L+ LAG R+WFG GSRI+IT+RDE LL    V++ Y   GLN DE+LQLF+  AFK   P
Sbjct: 296 LRGLAGERDWFGPGSRIVITTRDERLLTRLEVEKQYHAEGLNNDESLQLFSWHAFKKPHP 355

Query: 176 LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
           ++E V+LS  ++ Y GG+PLALEVLGS L  RS+  WRS +E+L+   P +I   L  S 
Sbjct: 356 MKEYVELSKVVVDYVGGVPLALEVLGSKLFKRSITHWRSFIEKLQKHLPHQIQRQLITSL 415

Query: 236 DGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWM 294
           D L    K +FLDIACFF G D+DYV   L+G GF+P +G  +L E+ L+TV++ N L M
Sbjct: 416 DDLDGEVKGMFLDIACFFNGMDKDYVGKILDGRGFYPEMGFDILRERSLLTVNSENELQM 475

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVL 330
            +LL+++G++I+ + +P   GKRSRLW  E++  VL
Sbjct: 476 DNLLRDMGREIIHQMAPNHPGKRSRLWHREDIMDVL 511


>gi|22329895|ref|NP_174439.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|20466614|gb|AAM20624.1| disease resistance gene, putative [Arabidopsis thaliana]
 gi|34098813|gb|AAQ56789.1| At1g31540 [Arabidopsis thaliana]
 gi|332193248|gb|AEE31369.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 776

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 197/577 (34%), Positives = 303/577 (52%), Gaps = 40/577 (6%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNV---- 56
           ++    ++  L+   S +VRM+GI G  G+GKTTIAR ++  +S  F+ S F+D      
Sbjct: 186 IEDHIAEMSLLLQLESKEVRMVGISGSSGIGKTTIARALFKRLSRHFQGSTFIDRAFVSY 245

Query: 57  -REISSKGG------LVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDD 109
            R I S          + LQ   LS++L   D  I    D    L  RL+ +KVL++IDD
Sbjct: 246 SRNIYSGANPDDPNMKLQLQGHFLSEILGKKDIKI----DDPAALEERLKHQKVLIIIDD 301

Query: 110 VVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKA 169
           + D+  L +L G  +WFG GSRII+ + D+H L  HG+D +Y+        A Q+    A
Sbjct: 302 LDDIMVLDTLVGQTQWFGYGSRIIVVTNDKHFLIAHGIDHIYEVSFPTDVHACQMLCQSA 361

Query: 170 FKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLE--IEPPSEI 227
           FK     +    L   ++R+AG  PL L +LG +L  R ++ W   L RLE  +    +I
Sbjct: 362 FKQNYAPKGFEDLVVDVVRHAGNFPLGLNLLGKYLRRRDMEYWMDMLPRLENSLRIDGKI 421

Query: 228 LDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITV 287
             IL+IS+DGL+  +++IF  IAC F   +   + + L          +  L +K LI V
Sbjct: 422 EKILRISYDGLESEDQEIFRHIACLFNHMEVTTIKSLLADSDVS--FALENLADKSLIHV 479

Query: 288 HNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNY 347
               + MH  LQE+G++IV+ QS ++ G+R  L    ++  +L   TGT+ V GI LD  
Sbjct: 480 RQGYVVMHRSLQEMGRKIVRIQSIDKPGEREFLVDPNDIHDILNACTGTQKVLGISLDI- 538

Query: 348 HHENEVYLCASAKAFSKMTNLRLLKICN-------LQLPNGLEYLSNRLRLLGWRGYPLK 400
              N   L    +AF  M+NLR L+I N       L LP   +YL   L+LL W  +P++
Sbjct: 539 --RNIRELDVHERAFKGMSNLRFLEIKNFGLKEDGLHLPPSFDYLPRTLKLLCWSKFPMR 596

Query: 401 FLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKL 460
            +P   + +  +++ M YS++ +LW+G+  L  LK M L  S NL  +PD + A NLE L
Sbjct: 597 CMPFGFRPENLVKLEMQYSKLHKLWEGVAPLTCLKEMDLHGSSNLKVIPDLSEATNLEIL 656

Query: 461 ILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLN------LKSLPT 514
            L+ C  L E+  S+   NKL+ L+M +C SL  LP    +KSL++LN      LK+ P 
Sbjct: 657 NLKFCESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGFNLKSLDRLNLYHCSKLKTFPK 716

Query: 515 TISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHL 551
             + +  L+ L+++      +FP  + H+E+L E  +
Sbjct: 717 FSTNISVLN-LNLTN---IEDFPSNL-HLENLVEFRI 748



 Score = 46.6 bits (109), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 602 SKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIAL 661
           SKL K  E V  +  L E+ L G+S  +V   +   T LE+LNL  C++LV LPSSI  L
Sbjct: 615 SKLHKLWEGVAPLTCLKEMDLHGSSNLKVIPDLSEATNLEILNLKFCESLVELPSSIRNL 674

Query: 662 KSLKTLNLSGCFKLENVPETLGQIESLEELDI 693
             L  L++  C  L+ +P T   ++SL+ L++
Sbjct: 675 NKLLNLDMLNCKSLKILP-TGFNLKSLDRLNL 705



 Score = 43.1 bits (100), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 71/178 (39%), Gaps = 52/178 (29%)

Query: 489 CTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSE 548
           C      P  ++   ++   L  L   ++ L CL  +D+ G    +  P++ E       
Sbjct: 597 CMPFGFRPENLVKLEMQYSKLHKLWEGVAPLTCLKEMDLHGSSNLKVIPDLSE------- 649

Query: 549 LHLEGTAIRGLPLSIELLSGLVLLNLK------------------------NCRSLEILP 584
                             + L +LNLK                        NC+SL+ILP
Sbjct: 650 -----------------ATNLEILNLKFCESLVELPSSIRNLNKLLNLDMLNCKSLKILP 692

Query: 585 VTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL 642
            T  NLK L  L L  CSKLK FP+      ++S L L+ T+I++ PS++ L   +E 
Sbjct: 693 -TGFNLKSLDRLNLYHCSKLKTFPKF---STNISVLNLNLTNIEDFPSNLHLENLVEF 746


>gi|298953305|gb|ADI99937.1| TIR-NBS-LRR-AAA+ATPase class resistance protein [Cucumis sativus]
          Length = 827

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 220/694 (31%), Positives = 345/694 (49%), Gaps = 116/694 (16%)

Query: 19  VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKG-GLVSLQRQLLSQLL 77
            RM+G+ G+GG+GKTT+A+ +Y+ I+ +FE   FL N+RE S +  GLV LQ +LL ++L
Sbjct: 199 TRMVGLHGIGGMGKTTLAKTLYNRIADDFEGCCFLANIREASKQHEGLVRLQEKLLYEIL 258

Query: 78  KLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSR 137
                 + +++ GI+++ +RL  KK+LL++DD+   +QLQ LAG  +WFG GS++I+T+R
Sbjct: 259 MDDFIRVSDLYKGINIIRNRLCSKKILLILDDIDTSEQLQVLAGGYDWFGYGSKVIVTTR 318

Query: 138 DEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLAL 197
           +EHLL  HG +++     LNY EAL+LF+  AF+   P  E +QLS   + Y   LPLAL
Sbjct: 319 NEHLLDIHGFNKLRSVPELNYGEALELFSWHAFQCSSPPTEYLQLSKDAVNYCKNLPLAL 378

Query: 198 EVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGND 257
           EVLGSFL      +++  LE   I                                   D
Sbjct: 379 EVLGSFLYSTDQSKFKGILEEFAIS--------------------------------NLD 406

Query: 258 RDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWMHDLLQELGQQIVQRQ---SPEE 313
           +D + N L+        GI+ L+   L+T++  N + MHDL+Q+LG  I + +   SP E
Sbjct: 407 KD-IQNLLQ--------GIQKLMNLSLLTINQWNKVEMHDLIQQLGHTIARSKTSISPSE 457

Query: 314 LGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKI 373
                +L   ++  HVL        V+ I L+ +    ++ +  S  AF K+ NL +LK+
Sbjct: 458 ----KKLLVGDDAMHVLDGIKDARAVKAIKLE-FPKPTKLDIIDST-AFRKVKNLVVLKV 511

Query: 374 CNLQLP--NGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHL 431
            N+  P  + L++L N LR + W  +P    PS+  M+  I++ + +S I    +   H 
Sbjct: 512 KNVISPKISTLDFLPNSLRWMSWSEFPFSSFPSSYSMENLIQLKLPHSAIQHFGRAFMHC 571

Query: 432 DKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKD-CT 490
           ++LK + LS+S  L  +PD + A NLE L L GC  L ++H S+    KLI L++     
Sbjct: 572 ERLKQLDLSNSFFLEEIPDLSAAINLENLSLSGCISLVKVHKSVGSLPKLIDLSLSSHVY 631

Query: 491 SLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHME-HLSEL 549
                P  + +KSL++ +     T + G                 +P+  + M+  L +L
Sbjct: 632 GFKQFPSPLRLKSLKRFSTDHC-TILQG-----------------YPQFSQEMKSSLEDL 673

Query: 550 HLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPE 609
             + ++I  L  +I  L+ L  L + +C+ L  LP T+ +L  L S+++S  S L  FP 
Sbjct: 674 WFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQ-SDLSTFP- 731

Query: 610 IVRSMKDLSELFLDGTSIKEVPSSIELLTKLEL-----------------------LNLS 646
                           S    PSS+ LLT+L L                       LNLS
Sbjct: 732 ----------------SSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLS 775

Query: 647 DCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPE 680
           +  N   LPS I+  KSL+ L    C  LE +P+
Sbjct: 776 N-NNFSILPSCIVNFKSLRFLETFDCKFLEEIPK 808



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 124/283 (43%), Gaps = 49/283 (17%)

Query: 543 MEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCS 602
           ME+L +L L  +AI+    +      L  L+L N   LE +P  +S    L +L LSGC 
Sbjct: 548 MENLIQLKLPHSAIQHFGRAFMHCERLKQLDLSNSFFLEEIP-DLSAAINLENLSLSGCI 606

Query: 603 KLKKFPEIVRSMKDLSELFLDG--TSIKEVPSSIELLTKLELLNLSDC------------ 648
            L K  + V S+  L +L L       K+ PS + L   L+  +   C            
Sbjct: 607 SLVKVHKSVGSLPKLIDLSLSSHVYGFKQFPSPLRL-KSLKRFSTDHCTILQGYPQFSQE 665

Query: 649 ------------KNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGT 696
                        ++ +L S+I  L SLK L +  C KL  +P T+  +  L  +++S +
Sbjct: 666 MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS 725

Query: 697 AVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEG---ALPSDIGNLC 753
            +    S YS              LP L+ L  L +  +T+ + +E    A PS      
Sbjct: 726 DLSTFPSSYS----------CPSSLPLLTRL-HLYENKITNLDFLETIAHAAPS------ 768

Query: 754 SLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLP 796
            L+EL LS N+F  LP+ I +   L  +E  DCK L+ +P++P
Sbjct: 769 -LRELNLSNNNFSILPSCIVNFKSLRFLETFDCKFLEEIPKIP 810


>gi|356506541|ref|XP_003522038.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 913

 Score =  270 bits (691), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 189/508 (37%), Positives = 296/508 (58%), Gaps = 21/508 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           +D   + L  ++   SS+VR+IGI GMGG+GKTTIA+ + + +   ++   F  NV+E  
Sbjct: 241 IDRSIQYLESMLQHESSNVRVIGIWGMGGIGKTTIAQEILNKLCSGYDGYCFFVNVKEEI 300

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGI-DMLGSRLQRKKVLLVIDDVVDVKQLQSL 119
            + G+++L+    S LL+  +N      +G+ + +  ++ R KVL+V+DDV D   L+ L
Sbjct: 301 RRHGIITLKEIFFSTLLQ--ENVKMITANGLPNYIKRKIGRMKVLIVLDDVNDSDLLEKL 358

Query: 120 AGNREWFGSGSRIIITSRDEHLL---KTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPL 176
            GN +WFG GSRII+T+RD+ +L   K H VD++Y+   LN  EAL+LF + AF      
Sbjct: 359 FGNHDWFGPGSRIILTTRDKQVLIANKVH-VDDIYQVGVLNPSEALELFILHAFNQKHFD 417

Query: 177 QECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFD 236
            E  +LS R++ YA G+PL L+VLG  L G+  + W S L++L+  P +++ + +++S+D
Sbjct: 418 MEYYKLSKRVVCYAKGIPLVLKVLGGLLCGKDKEVWESQLDKLKNMPNTDVYNAMRLSYD 477

Query: 237 GLQELEKKIFLDIACFFKGND--RDYVTNFLEGC--GFHPVIGIRVLIEKCLITVHN-NT 291
            L   E+KIFLD+ACFF G D   D +   L+        V+G+  L +K LIT+   N 
Sbjct: 478 DLDRKEQKIFLDLACFFIGLDVKVDLIKVLLKDNERDNSVVVGLERLKDKSLITISKYNI 537

Query: 292 LWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHEN 351
           ++MHD++QE+G +IV+++S E+ G RSRLW  +++  VL  + GTE +  I  D      
Sbjct: 538 VYMHDIIQEMGWEIVRQESIEDPGSRSRLWDADDIYEVLKNNKGTESIRSIRADLSAIRE 597

Query: 352 EVYLCASAKAFSKMTNLRLLKI----CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQ 407
              L  S   F+KM+ L+ L      C    P+ L+  S  LR   WR +PLK LP N  
Sbjct: 598 ---LKLSPDTFTKMSKLQFLYFPHQGCVDNFPHRLQSFSVELRYFVWRYFPLKSLPENFS 654

Query: 408 MDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTR 467
               + + + YSR+ +LW G+++L  LK + +S S+NL  +P+ + A NLE L +  C +
Sbjct: 655 AKNLVLLDLSYSRVEKLWDGVQNLKNLKEVKVSGSKNLKELPNLSEATNLEVLDISACPQ 714

Query: 468 LYEIHPSLLLHNKLII--LNMKDCTSLI 493
           L  + PS+   NKL I  LN +  T +I
Sbjct: 715 LASVIPSIFSLNKLKIMKLNYQSFTQMI 742


>gi|13509234|emb|CAC35337.1| Nbi-C protein [Linum usitatissimum]
          Length = 1107

 Score =  270 bits (691), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 253/834 (30%), Positives = 406/834 (48%), Gaps = 117/834 (14%)

Query: 12   MDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-ISSKGGLVSLQR 70
            +DS +S+ ++IGI GMGGLGKTT+A+ VYD +   FE   FL+N+R+ +S K G++ +Q 
Sbjct: 227  LDSSASE-KIIGIHGMGGLGKTTLAKAVYDKVFTRFERCFFLENIRDTLSEKNGVLIMQN 285

Query: 71   QLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGS 130
            +++S +L+   N      DGI ++  R+ R K+L+V+DDV +  Q   + G    F   S
Sbjct: 286  KIISGILRKDFNEAKYASDGIRIIRDRVCRHKLLIVLDDVDEKFQFDEVLGKLNNFSMDS 345

Query: 131  RIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYA 190
            R +IT+RD   L+     ++++   ++ D +L LFN  AF    P ++   LS   ++ A
Sbjct: 346  RFLITTRDARGLELLRECKMFELQEMSPDHSLTLFNKNAFGAEFPPEDYAILSNEFVQAA 405

Query: 191  GGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIA 250
             GLPL ++V+GS L       W   LE L+   P+++ + L+IS++ L   EK+IFLDIA
Sbjct: 406  AGLPLYIKVIGSLLFRMDKIFWEEKLEELKKISPTKVQERLKISYNELTHNEKQIFLDIA 465

Query: 251  CFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN--------NTLWMHDLLQELG 302
            C+F G  +         C F+P   IR L ++ LI +          NT  MH+ +++LG
Sbjct: 466  CYFIGLSKIEPILMWSDCDFYPESTIRYLTQRSLIKLQRSEVKGDDINTFQMHNHVRDLG 525

Query: 303  QQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAF 362
            + IV+ ++ +   KRSR+W  ++   +L    GT+ VE + +D    +    L  + K  
Sbjct: 526  RAIVREENNQNPYKRSRIWSNKDAIDMLKHKKGTDCVEVLTVDMEGED----LILTNKEL 581

Query: 363  SKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIG 422
             K+T LR L + N +L    + +   LR L  R +    +P+ L ++K +++ +    + 
Sbjct: 582  EKLTRLRYLSVSNARLAGDFKDVLPNLRWL--RLHSCDSVPTGLYLNKLVDLELVDCSVR 639

Query: 423  ELWKG---IKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLY-EIHPS---- 474
            + WKG   +K   KLK + L    +L ++PDF+   +LE L  +GC  ++ E+       
Sbjct: 640  DGWKGWNELKVAHKLKAVTLERCFHLKKVPDFSDCGDLEFLNFDGCGNMHGEVDIGNFKS 699

Query: 475  ---LLLHNKLI---------ILNMK----DCTSLITLPGKI-LMKSLEKLNL-------- 509
               L++ N  I         ++N+K      +SL  +P  I  + SLE L L        
Sbjct: 700  LRFLMISNTKITKIKGEIGRLVNLKYLIASNSSLKEVPAGISKLSSLEWLYLTLTDPYKS 759

Query: 510  ---KSLPTTISGLKC--------------LSTL---DVS-------GDLKFREF------ 536
               ++LP +++ L C              LSTL   DV        G LK  E+      
Sbjct: 760  DFTETLPASLTLLSCENLQSLSNLSNLINLSTLILCDVGIGEIIGLGKLKMLEYLIIERA 819

Query: 537  PEIV-----EHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLK 591
            P IV     E++  L +L +EG  + G   S+  L  L  L +++C  +  +       +
Sbjct: 820  PRIVHLDGLENLVLLQQLRVEGCPVLGKLPSLVALIRLEKLWIEDCPLVTEINGVGQRWE 879

Query: 592  CLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKE-VPSSIELLTKLELL------- 643
             L  LK+ GCS L    E + SM  L  L L G  I E VPSS+ + T+L  L       
Sbjct: 880  SLSDLKVVGCSALIGL-EALHSMVKLRSLILMGAKITETVPSSLSMFTQLTTLGLCFMSQ 938

Query: 644  ----NLSDCKN-----------LVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESL 688
                NLS+ KN           L+ +P  +  L+SL+ L+LSGC  +  VP+  G ++ L
Sbjct: 939  EQFPNLSNLKNLRELGMDYCLELIEVP-GLDTLESLEYLSLSGCQSIRKVPDLSG-MKKL 996

Query: 689  EELDISGTAVPHSTSWYSYIPINLMRKSVALK----LPSLSGLCSLRKLNLTDC 738
            + LD+ G            +      K    K    LP+LSGL +LR+L L  C
Sbjct: 997  KTLDVEGCIQLKEVEGLERLESLEELKMSGCKSIEELPNLSGLKNLRELLLKGC 1050


>gi|224123354|ref|XP_002319058.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222857434|gb|EEE94981.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 522

 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 150/336 (44%), Positives = 220/336 (65%), Gaps = 12/336 (3%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVRE-I 59
           +DS+ + +  ++  G+++VR++GI GM G+GKTTIA+ V++ I H+FE S  L N+RE +
Sbjct: 191 IDSQVKDIISMLCVGTNEVRIVGIYGMPGIGKTTIAKAVFNQICHQFEGSSCLLNIRERL 250

Query: 60  SSKGGLVSLQ----RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQ 115
               GL+ LQ    R      +++ D+      D  D + S+  RK+VL+++DDV  +K 
Sbjct: 251 DQHRGLLQLQQQLLRDAFKGYIRIHDD------DDEDGIKSQFCRKRVLVILDDVDQLKH 304

Query: 116 LQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQP 175
           L+ LAG R+WFG GSRI+IT+RDE LL    V++ Y   GLN DE+LQLF+  AFK   P
Sbjct: 305 LRGLAGERDWFGPGSRIVITTRDERLLTRLEVEKQYHAEGLNNDESLQLFSWHAFKKPHP 364

Query: 176 LQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISF 235
           ++E V+LS  ++ Y GG+PLALEVLGS L  RS+  WRS +E+L+   P +I   L  S 
Sbjct: 365 MKEYVELSKVVVDYVGGVPLALEVLGSKLFKRSITHWRSFIEKLQKHLPHQIQRQLITSL 424

Query: 236 DGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHN-NTLWM 294
           D L    K +FLDIACFF G D+DYV   L+G GF+P +G  +L E+ L+TV++ N L M
Sbjct: 425 DDLDGEVKGMFLDIACFFNGMDKDYVGKILDGRGFYPEMGFDILRERSLLTVNSENELQM 484

Query: 295 HDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVL 330
            +LL+++G++I+ + +P   GKRSRLW  E++  VL
Sbjct: 485 DNLLRDMGREIIHQMAPNHPGKRSRLWHREDIMDVL 520


>gi|357519029|ref|XP_003629803.1| Resistance protein [Medicago truncatula]
 gi|355523825|gb|AET04279.1| Resistance protein [Medicago truncatula]
          Length = 724

 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 236/686 (34%), Positives = 336/686 (48%), Gaps = 140/686 (20%)

Query: 11  LMDSGSSD-VRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGLVSLQ 69
           L+D GS+D V MIGI G+GG+GKTT+   VY+LI+  FE   FL+NVRE S K GL  LQ
Sbjct: 9   LLDVGSNDEVSMIGIHGIGGIGKTTLDLAVYNLIADSFEGLCFLENVRENSDKHGLQHLQ 68

Query: 70  RQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSG 129
           + LLS+ L                   ++ +KKVLL++DDV  ++QL++L G  +W GSG
Sbjct: 69  KILLSETLG----------------EKKINKKKVLLILDDVDKIEQLEALVGGFDWLGSG 112

Query: 130 SRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRY 189
           SR+IIT+RD+HLL++HGV+  Y+                       LQ       R + Y
Sbjct: 113 SRVIITTRDKHLLESHGVNITYE-----------------------LQ-------RAVAY 142

Query: 190 AGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDI 249
           A GLPLAL V+GS L G++V EW S L R E  P  +I  IL++SFD L+E E+ +FLDI
Sbjct: 143 ASGLPLALIVIGSNLFGKTVQEWESALHRYETIPNKDIQKILKVSFDALEEDEQSVFLDI 202

Query: 250 ACFFKG-NDR-DYVTNFL----EGC-GFHPVIGIRVLIEKCLITVHNNT-LWMHDLLQEL 301
           ACF+ G ND+   V N L    + C  +H    I VL+EK LI + +++ L +H L++++
Sbjct: 203 ACFYGGTNDKLADVENMLHAHYDACMKYH----IGVLVEKSLIKISSHSKLTLHALIEDM 258

Query: 302 GQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKA 361
           G++IV+ +SPEE GKRSRLW  E++  VL E+T  +            EN          
Sbjct: 259 GKEIVRLESPEEPGKRSRLWSHEDIIQVLEENTVKD------------ENPK-------- 298

Query: 362 FSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRI 421
                  +LL I       G ++L N LR + W  YP ++LP +    K I         
Sbjct: 299 -------KLLTIKGGHFSKGPKHLPNSLRAVEWWRYPSEYLPYDFHPKKPI--------- 342

Query: 422 GELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNKL 481
                          +    ++ L  +PD +   NLE    E C +L  IH S+   +KL
Sbjct: 343 ---------------LNFDDADCLTEIPDVSSLLNLETFSFEYCEKLITIHESVGFLDKL 387

Query: 482 IILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVE 541
            +L+ K C+ L   P  I +KSLE+LNL           C S          + FP+I+ 
Sbjct: 388 KVLSAKGCSKLRRFP-PIKLKSLEQLNLSF---------CKS---------LKNFPQILW 428

Query: 542 HMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTV---SNLKCLRSLKL 598
             E+++EL LE T I+  P S + L+ L  L L  C +   LP  +    NL  + + K 
Sbjct: 429 KKENITELGLEETPIKEFPCSFQSLTRLQTLQLHYCGTFR-LPNNIFMMPNLVNITAWKS 487

Query: 599 SGCSKLKKFP------EIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLV 652
            G    K+         IV S  +   L     S    PS +     ++ L+L+   N  
Sbjct: 488 QGWILPKQDEGEQRDISIVSSNVERLHLIFCILSDDFFPSGLTWFRNVKELSLAH-NNFT 546

Query: 653 RLPSSIIALKSLKTLNLSGCFKLENV 678
            LP  I     L  LNL  C  L+ V
Sbjct: 547 ILPECIQECHFLTDLNLDYCQYLQEV 572



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 122/308 (39%), Gaps = 83/308 (26%)

Query: 630 VPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLE 689
           +  S+  L KL++L+   C  L R P   I LKSL+ LNLS C  L+N P+ L + E++ 
Sbjct: 377 IHESVGFLDKLKVLSAKGCSKLRRFPP--IKLKSLEQLNLSFCKSLKNFPQILWKKENIT 434

Query: 690 ELDISGTAVPHSTSWYS----------------YIPINLMR----------KSVALKLP- 722
           EL +  T +      +                  +P N+            KS    LP 
Sbjct: 435 ELGLEETPIKEFPCSFQSLTRLQTLQLHYCGTFRLPNNIFMMPNLVNITAWKSQGWILPK 494

Query: 723 -------SLSGLCS-LRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTSITH 774
                   +S + S + +L+L  C L +   PS +    ++KEL L+ N+F  LP  I  
Sbjct: 495 QDEGEQRDISIVSSNVERLHLIFCILSDDFFPSGLTWFRNVKELSLAHNNFTILPECIQE 554

Query: 775 LSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASLVTLLDALKLCKSDSTMIACLDSLK 834
              L ++ L+ C+ LQ +  + PN+        A L                      L+
Sbjct: 555 CHFLTDLNLDYCQYLQEVRGIVPNLVNFFPPAIADL---------------------GLE 593

Query: 835 LLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKK 894
           L GN++  F +                   PG+ I  WF +++ G SI+      L+ + 
Sbjct: 594 LHGNRNTMFYL-------------------PGARILNWFEHRSSGQSIS------LWFRN 628

Query: 895 KLVGYAIC 902
           K    A+C
Sbjct: 629 KFPAIALC 636


>gi|356561378|ref|XP_003548959.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 918

 Score =  270 bits (690), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 218/640 (34%), Positives = 328/640 (51%), Gaps = 59/640 (9%)

Query: 87  VFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHG 146
           V +GI ++  RL   K+LL +DDV D+ QL+++AG  +WFGSGSRIIIT+RD HLL  HG
Sbjct: 167 VNEGIPIIKHRLHLMKILLFLDDVDDLDQLRAIAGGTDWFGSGSRIIITTRDRHLLTCHG 226

Query: 147 VDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSG 206
           V   Y+ HGLN +EAL+L    AFK  +     V +  R++ Y  GLPLALEV+GS LSG
Sbjct: 227 VKNKYEVHGLNKEEALKLLTWSAFKIDKVDPCYVNILNRVVTYTSGLPLALEVIGSNLSG 286

Query: 207 RSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLE 266
           +  + W S L++ E  P  +I DIL++SFD LQE E KIFLDIAC FKG D  YV   L 
Sbjct: 287 KRKEVWESALDQYERIPDKKIQDILKVSFDSLQEDEHKIFLDIACCFKGYDFTYVKEVLS 346

Query: 267 -GCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEE 325
              GF P   I VLI+K L+   ++ L MHDL++++G++IV+++SP E GKRSRLW  E+
Sbjct: 347 IHHGFCPKYAIGVLIDKSLLCRRSSYLTMHDLIEDMGKEIVRQESPGEPGKRSRLWLHED 406

Query: 326 VCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYL 385
           +  VL E+ GT  ++ I+LD   +E   +      A  +M NL+ L +      NG ++L
Sbjct: 407 IVQVLEENEGTSRIQMIILDCLKYEVVQW---DGMASKEMNNLKTLIVKGGCFSNGPKHL 463

Query: 386 SNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENL 445
            N LR+L W GYP +  PS+ Q  K + + + YS +  L   +   +KL   I +  E  
Sbjct: 464 PNSLRVLDWWGYPSRSFPSDFQPKKLVRLQLPYSHLMCL--NLLSSNKLPSSIYAMQE-- 519

Query: 446 IRMPDFTGAPNLEKLILEGCTRLY-------EIHPSLLLHNKLIILNMKDCTSLITLPGK 498
                      L  LI++ C  L        E+  + L+    I+L++  C     +  K
Sbjct: 520 -----------LRHLIVKACKGLLLPKEDKGEVQTNSLVFKNTIVLDLSKC----NISDK 564

Query: 499 ILMKSLEKL-NLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSELHLEG---- 553
            L + L    N++ L         LS  D      F   P  ++    L++++L+G    
Sbjct: 565 SLQRGLHLFANMREL--------YLSYND------FTILPASIKECHVLTKIYLKGCENL 610

Query: 554 TAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRS 613
             IRG+P ++E  S ++  +L     L +LP        LR L ++GC  LKK   I + 
Sbjct: 611 QEIRGVPPNLEGFS-VIECSLLKDLDLTLLPTENKKRFFLRMLYVTGCKNLKKIEGIPQR 669

Query: 614 MKDLSELFLDGTSIKEV---PSSIELLTKLELLNLSDCKNLVR---LPSSIIALKSLKTL 667
           ++ L   F     I E    P+  +       + L +C+NL     +P  I    +    
Sbjct: 670 IEVLRVTFCSSLKIVEFTLHPAGTQGFHLRREIVLDNCENLQEIKGIPFGIQYFSARDCH 729

Query: 668 NLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSY 707
           +LS   +   + + L +        ++GT +P    W+ +
Sbjct: 730 SLSSECRSMLLSQELHETRECGVFYLAGTRIP---EWFHH 766



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 38/164 (23%)

Query: 648 CKNLV---RLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSW 704
           C NL+   +LPSSI A++ L+ L +  C  L    E  G++++   L    T V      
Sbjct: 501 CLNLLSSNKLPSSIYAMQELRHLIVKACKGLLLPKEDKGEVQT-NSLVFKNTIV------ 553

Query: 705 YSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNS 764
                                       L+L+ CN+ + +L   +    +++ELYLS N 
Sbjct: 554 ----------------------------LDLSKCNISDKSLQRGLHLFANMRELYLSYND 585

Query: 765 FVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCA 808
           F  LP SI     L  I L+ C+ LQ +  +PPN+    V  C+
Sbjct: 586 FTILPASIKECHVLTKIYLKGCENLQEIRGVPPNLEGFSVIECS 629


>gi|357474815|ref|XP_003607693.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508748|gb|AES89890.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 982

 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 187/551 (33%), Positives = 283/551 (51%), Gaps = 86/551 (15%)

Query: 64  GLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNR 123
           G +++Q+Q+L Q L    + I N+    +++  RL  + +LL+ D+V  V+QL+ +   R
Sbjct: 278 GPLNVQKQILHQTLNEEHHHICNLHIASNLIRRRLCCQSILLIFDNVDKVEQLEKIVVRR 337

Query: 124 EWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQECVQLS 183
           +W   GS+III SRDEH+LK +GVDEVYK   L++  + +L   KAFK    L     L 
Sbjct: 338 DWLDVGSKIIIISRDEHILKEYGVDEVYKVPLLDWTNSRRLLCRKAFKIDHILSGYEGLV 397

Query: 184 ARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQELEK 243
             ++ Y  GLPLA++VLGSFL  R + EW S L RL   P  +++D+L            
Sbjct: 398 NGVLHYVNGLPLAIKVLGSFLFDRDIIEWESALVRLRESPNKDVMDVL------------ 445

Query: 244 KIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQ 303
                                             VLI+K L+++    + MHD+LQELG+
Sbjct: 446 ----------------------------------VLIDKSLVSIEEE-IQMHDMLQELGR 470

Query: 304 QIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCA---SAK 360
            IVQ  S +E  K SRLW +E+   V+ E+     VE +VLD+     E+ +        
Sbjct: 471 NIVQENSSKERRKWSRLWLKEQFYDVMLENM---YVEAMVLDS-----EIRIDGEEMDEA 522

Query: 361 AFSKMTNLRLLKICNLQLPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMDKTIEIYMCYSR 420
            F + ++LRLL I ++ +   L  LSN+LR   W  YP  +LPSN Q ++ ++  + +S 
Sbjct: 523 IFKRFSSLRLLIIEDVDISGSLSCLSNKLRYFEWHEYPFMYLPSNFQPNQLVQHILKHSC 582

Query: 421 IGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLYEIHPSLLLHNK 480
           I +LWKG K+L  L  + LS+S +LI++P+F   PNLE L LEGC  L  + PS+ L  K
Sbjct: 583 IKQLWKGRKYLPNLITLDLSYSSHLIKVPNFGEFPNLEHLNLEGCKNLLRLDPSIGLLRK 642

Query: 481 LIILNMKDCTSLITLPGKIL-MKSLEKLNL-------------------------KSLPT 514
           ++ LN+KDC +L+++P  I  +  L+ LN+                            PT
Sbjct: 643 IVSLNLKDCKNLVSIPNNIFGLSFLKDLNMCGCSEVFNIPWDLNIIESVLLFLPNSPFPT 702

Query: 515 TISGLKCL-STLDVSGDLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLN 573
             +    L S + +S      + P+ +  +  L EL+L G     LP S+  LS LV LN
Sbjct: 703 PTAQTNWLTSIISLSCFCGLNQLPDAIGCLHWLEELNLGGNKFVTLP-SLRDLSKLVCLN 761

Query: 574 LKNCRSLEILP 584
           L++C+ LE LP
Sbjct: 762 LEHCKLLESLP 772



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 193/446 (43%), Gaps = 120/446 (26%)

Query: 593  LRSLKLSGCSKLKKFPEIVRSMKDLSELFLDG-TSIKEVPSSIELLTKLELLNLSDCKNL 651
            L +L LS  S L K P       +L  L L+G  ++  +  SI LL K+  LNL DCKNL
Sbjct: 596  LITLDLSYSSHLIKVPNF-GEFPNLEHLNLEGCKNLLRLDPSIGLLRKIVSLNLKDCKNL 654

Query: 652  VRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIESLEELDISGTAVPHSTSWYSYIPIN 711
            V +P++I  L  LK LN+ GC ++ N+P  L  IES+  L +  +  P  T+  +++   
Sbjct: 655  VSIPNNIFGLSFLKDLNMCGCSEVFNIPWDLNIIESV-LLFLPNSPFPTPTAQTNWLT-- 711

Query: 712  LMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKELYLSKNSFVSLPTS 771
                     + SLS  C L +            LP  IG L  L+EL L  N FV+LP S
Sbjct: 712  --------SIISLSCFCGLNQ------------LPDAIGCLHWLEELNLGGNKFVTLP-S 750

Query: 772  ITHLSKLLNIELEDCKRLQSLPQLP------PNIRQ---VRVNGCASLVTLLDALKLCKS 822
            +  LSKL+ + LE CK L+SLPQLP       N+R+   V+  G    + + +  KLC+S
Sbjct: 751  LRDLSKLVCLNLEHCKLLESLPQLPFPTAIKHNLRKKTTVKKRG----LYIFNCPKLCES 806

Query: 823  DSTMIACLDSLKLLGNKSLAFSMLREYLEAVSNTRQHLSVVVPGSEIPEWFMYQNEGSSI 882
            +                                           SEI  WF  Q++G SI
Sbjct: 807  EH--------------------------------------YCSRSEISSWFKNQSKGDSI 828

Query: 883  TV-TRPSNLYNKKKLVGYAICCVFHVLKN--SR-----------GNNCFGSYPTHQLNCH 928
             + + P    N   ++G+  C VF +  +  SR             NC  S P       
Sbjct: 829  RIDSSPIIHDNNNNIIGFVCCAVFSMAPHHPSRYLPLEFVEIHGKRNCTTSIP------- 881

Query: 929  IGHGIYGIGFRDKFGQAGSDHLWLLYLSRQTCYDIRLPLESNLEPFESNHVNVSFEPWLG 988
                   +   +      S+H+WL Y   ++ +++R          E+ HV  S     G
Sbjct: 882  -------VILIESLFTVKSNHIWLAYFPLESFWNVR---------NETMHVAAS----TG 921

Query: 989  QGL--EVKMCGLHPVYMDEVEELDQT 1012
            +GL  +VK+ G H VY  +++EL+ T
Sbjct: 922  EGLVIKVKIFGYHWVYKHDLQELNLT 947



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 38/182 (20%)

Query: 572 LNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTS-IKEV 630
           LNL+ C++L  L  ++  L+ + SL L  C  L   P  +  +  L +L + G S +  +
Sbjct: 622 LNLEGCKNLLRLDPSIGLLRKIVSLNLKDCKNLVSIPNNIFGLSFLKDLNMCGCSEVFNI 681

Query: 631 PSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLS-----GCF-KLENVPETLGQ 684
           P  + ++  +          L+ LP+S     + +T  L+      CF  L  +P+ +G 
Sbjct: 682 PWDLNIIESV----------LLFLPNSPFPTPTAQTNWLTSIISLSCFCGLNQLPDAIGC 731

Query: 685 IESLEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGA 744
           +  LEEL++ G                       + LPSL  L  L  LNL  C L+E +
Sbjct: 732 LHWLEELNLGGNKF--------------------VTLPSLRDLSKLVCLNLEHCKLLE-S 770

Query: 745 LP 746
           LP
Sbjct: 771 LP 772


>gi|357468599|ref|XP_003604584.1| Disease resistance-like protein [Medicago truncatula]
 gi|355505639|gb|AES86781.1| Disease resistance-like protein [Medicago truncatula]
          Length = 684

 Score =  268 bits (684), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 187/501 (37%), Positives = 283/501 (56%), Gaps = 22/501 (4%)

Query: 1   MDSRCEKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREIS 60
           MD     L  L++  S  VR+IGI GMGG+GKTTIA+ ++D I  E++   F+ NV    
Sbjct: 182 MDKPIAHLNSLLNKESGKVRVIGIWGMGGIGKTTIAKELFDQICSEYDGCCFMSNVSLGL 241

Query: 61  SKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLA 120
              G+  L+  L S LL   D  I +     + +  R+ R KVL+V+DD+ +   L+ L 
Sbjct: 242 QSRGITFLKEMLFSNLLN-EDVKIDSSNGLSNNIHRRIDRMKVLIVLDDIKEEGLLEMLF 300

Query: 121 GNREWFGSGSRIIITSRDEHLLKTHGV--DEVYKPHGLNYDEALQLFNMKAFKTYQPLQE 178
           G  +WF S SRII+TSRD+ +L  + V  D+VY+   LN  +AL LFN+ AFK      +
Sbjct: 301 GTLDWFRSDSRIIVTSRDKQVLIANEVDDDDVYEVGVLNSSDALALFNLNAFKESHLEIK 360

Query: 179 CVQLSARIIRYAGGLPLALEVLGSFLSGR-SVDEWRSTLERLEIEPPSEILDILQISFDG 237
              LS +++ YA G+PL L+VLG    G+ +   W   LE+LE  P  EI  ++++S+D 
Sbjct: 361 YYDLSKKVVDYAKGIPLVLKVLGHMFRGKHNKKTWVYQLEKLEKVPIQEIDKVMRLSYDD 420

Query: 238 LQELEKKIFLDIACFFKGND--RDYVTNFLEG--CGFHPVIGIRVLIEKCLITV-HNNTL 292
           L  LE+K FLDIACFF G +   DY+   L+         +G+  L +K LIT+  +N +
Sbjct: 421 LDLLEQKYFLDIACFFNGLNLKVDYMKLLLKDYESDNSVAVGLERLKDKALITISEDNVI 480

Query: 293 WMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENE 352
            MHD  Q++G+++V+ +S ++  K+SRLW  +++C+VL    GT+ +  I ++     + 
Sbjct: 481 SMHDFQQKMGREVVRLESIKDPSKQSRLWDPDDICYVLENDKGTDAIRSIRVN----LSS 536

Query: 353 VYLCA-SAKAFSKMTNLRLLKI-------CNLQLPNGLEYLSNRLRLLGWRGYPLKFLPS 404
           V++   S   F+KMTNL+ L         C   LP GL+   N LR L W  YPLK  P 
Sbjct: 537 VWMLKLSPHVFAKMTNLKFLNFFGGYDNDCLDLLPRGLQSFPNDLRYLRWVCYPLKSFPE 596

Query: 405 NLQMDKTIEIYMCYSRIGELWKGIK-HLDKLKVMILSHSENLIRMPDFTGAPNLEKLILE 463
           N   +  + + + YS++ +LW G++  L  LK + LSHS  L  +P+F+ A NL  L +E
Sbjct: 597 NFSAENLVILNLRYSKVEKLWCGVQPDLVNLKEVKLSHSGFLKELPNFSKAENLNVLHIE 656

Query: 464 GCTRLYEIHPSLLLHNKLIIL 484
            C +L  +HPS+    KL+ L
Sbjct: 657 DCPQLESVHPSIFCPGKLVKL 677


>gi|224102681|ref|XP_002334151.1| NBS resistance protein [Populus trichocarpa]
 gi|222869840|gb|EEF06971.1| NBS resistance protein [Populus trichocarpa]
          Length = 260

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 131/244 (53%), Positives = 178/244 (72%)

Query: 91  IDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNREWFGSGSRIIITSRDEHLLKTHGVDEV 150
           ID++  RL+ KKVLL++DDV D +QLQ LA     FG GSRIIITSR++H+L +HGV  +
Sbjct: 13  IDLIKRRLRLKKVLLILDDVDDEEQLQMLAAEHGSFGPGSRIIITSRNKHVLDSHGVTRI 72

Query: 151 YKPHGLNYDEALQLFNMKAFKTYQPLQECVQLSARIIRYAGGLPLALEVLGSFLSGRSVD 210
           Y+   LN  +AL LF+ KAFK  QP ++  +LS +++ YA GLPLALEV+GSFL  R + 
Sbjct: 73  YEAEKLNDKDALMLFSWKAFKRDQPAEDLSELSKQVVGYANGLPLALEVIGSFLHKRGLR 132

Query: 211 EWRSTLERLEIEPPSEILDILQISFDGLQELEKKIFLDIACFFKGNDRDYVTNFLEGCGF 270
           EW+S ++R+   P  +I+D L+ISFDGL ELEKKIFLDIACF KG  +D +T  L+ CGF
Sbjct: 133 EWKSAIDRMNDMPDRKIIDALRISFDGLHELEKKIFLDIACFLKGMKKDRITRLLDSCGF 192

Query: 271 HPVIGIRVLIEKCLITVHNNTLWMHDLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVL 330
           H  IG++ LIEK LI V  + + MH+LLQ++G++IV+ +SPEE G+RSRL   ++VC  L
Sbjct: 193 HADIGMQALIEKSLIRVSRDEIRMHNLLQKMGEEIVRCESPEEPGRRSRLCTYKDVCDAL 252

Query: 331 TEST 334
            +ST
Sbjct: 253 KDST 256


>gi|297800054|ref|XP_002867911.1| hypothetical protein ARALYDRAFT_914672 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313747|gb|EFH44170.1| hypothetical protein ARALYDRAFT_914672 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 966

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 219/717 (30%), Positives = 347/717 (48%), Gaps = 131/717 (18%)

Query: 6   EKLRFLMDSGSSDVRMIGICGMGGLGKTTIARVVYDLISHEFEASGFLDNVREISSKGGL 65
           EKL   +D+ +    ++G+ GM G+GKT +A+  Y+    +F  S  L +V ++ ++ G 
Sbjct: 48  EKLEEKLDAWNGKTCIVGVVGMPGIGKTALAKSFYNRWEKQFAYSMCLADVSKMLNEHGP 107

Query: 66  VSLQRQLLSQLLKLAD--NSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQSLAGNR 123
             LQ +LL +LLK     + IW            L ++K  +V+DDV   +Q++ L GN 
Sbjct: 108 NWLQMRLLRELLKDTHPLHQIWK---------DELLKRKFFVVLDDVNGKEQIEYLLGNL 158

Query: 124 EWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQE--CVQ 181
           +W   GS+I+IT+ D+ L++ + V+  +    LN ++ L+ F   AF    P  E   ++
Sbjct: 159 DWIKEGSKIVITTSDKSLVQ-NLVNYTFVVPILNDEDGLKCFTYHAFGPNNPPPEENYLR 217

Query: 182 LSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDGLQEL 241
           LS +I+ YA G PL L+ LG  L G+  ++W   +  L      +I D L   +  L E 
Sbjct: 218 LSRKILDYAKGNPLFLKELGVELLGKEEEDWEKRVGTLTQSSSPKIQDALSKRYLELSEK 277

Query: 242 EKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVHNNTLWMHDLLQEL 301
           +K  FLDIACFF+     YV   L+ C    VIG   L ++ LI++    + MHD+L   
Sbjct: 278 QKDAFLDIACFFRSKTTSYVRCMLDSCD-SGVIGD--LTDRFLISISGGRVEMHDVLYTF 334

Query: 302 GQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEGIVLDNYHHENEVYLCASAKA 361
           G+++  R        + RLW  +++  +L   +  E V G+ LD    + ++       +
Sbjct: 335 GKELASRV-------QCRLWNHKKIVRMLKYKSEMENVRGVYLDMSEVKEKM-------S 380

Query: 362 FSKMTNLRLLKI----CNLQ--------LPNGLEYLSNRLRLLGWRGYPLKFLPSNLQMD 409
           F+ M +LR LKI    C ++        +  GL++    +R L W  + L  LP +    
Sbjct: 381 FTSMRSLRYLKIYSSICPMECKADQIIVVAEGLQFTLAEVRCLDWLRFSLDKLPLDFNAK 440

Query: 410 KTIEIYMCYSRIGELWKGIKHLDKLKVMILSHSENLIRMPDFTGAPNLEKLILEGCTRLY 469
             + + + YS I ++W+G+K L                 P+  G  N++ L+        
Sbjct: 441 NLVNLSLPYSSIKQVWEGVKVL-----------------PEKMG--NMKSLVF------- 474

Query: 470 EIHPSLLLHNKLIILNMKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSG 529
                         LNM+ CTSL  +P         K NL SL   I          +S 
Sbjct: 475 --------------LNMRGCTSLRNIP---------KANLSSLKVLI----------LSD 501

Query: 530 DLKFREFPEIVEHMEHLSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSN 589
             +F+EF  I E++E    L+L+GTA+  LP +I  L  LVLLNL++C++LE LP ++  
Sbjct: 502 CSRFQEFQVISENLE---TLYLDGTALETLPPAIGNLQRLVLLNLRSCKALEHLPSSLRK 558

Query: 590 LKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSIKEV------------------- 630
           LK L  L LSGCSKLK FP    +MK L  L  DGT++KE+                   
Sbjct: 559 LKALEDLILSGCSKLKSFPTDTGNMKHLRILLYDGTALKEIQMILHFKESLQRLCLSGNS 618

Query: 631 ----PSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLG 683
               P++I+ L  L+ L+L  C+NL+ LP+      +L+ L+  GC KLE+V + L 
Sbjct: 619 MINLPANIKQLNHLKWLDLKYCENLIELPT---LPPNLEYLDAHGCHKLEHVMDPLA 672



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 209/464 (45%), Gaps = 67/464 (14%)

Query: 510 KSLPTTISGLKCLSTLDVSGDLKFREF--PEIVEHMEHLSELHLEGTAIRGLPLSIELLS 567
           + L  T++ ++CL  L  S D    +F    +V      S +      ++ LP  +  + 
Sbjct: 411 EGLQFTLAEVRCLDWLRFSLDKLPLDFNAKNLVNLSLPYSSIKQVWEGVKVLPEKMGNMK 470

Query: 568 GLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLKKFPEIVRSMKDLSELFLDGTSI 627
            LV LN++ C SL  +P   +NL  L+ L LS CS+ ++F  I    ++L  L+LDGT++
Sbjct: 471 SLVFLNMRGCTSLRNIPK--ANLSSLKVLILSDCSRFQEFQVIS---ENLETLYLDGTAL 525

Query: 628 KEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLKTLNLSGCFKLENVPETLGQIES 687
           + +P +I  L +L LLNL  CK L  LPSS+  LK+L+ L LSGC KL++ P   G ++ 
Sbjct: 526 ETLPPAIGNLQRLVLLNLRSCKALEHLPSSLRKLKALEDLILSGCSKLKSFPTDTGNMKH 585

Query: 688 LEELDISGTAVPHSTSWYSYIPINLMRKSVALKLPSLSGLCSLRKLNLTDCNLMEGALPS 747
           L  L   GTA+         I + L  K                                
Sbjct: 586 LRILLYDGTALKE-------IQMILHFKE------------------------------- 607

Query: 748 DIGNLCSLKELYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGC 807
                 SL+ L LS NS ++LP +I  L+ L  ++L+ C+ L  LP LPPN+  +  +GC
Sbjct: 608 ------SLQRLCLSGNSMINLPANIKQLNHLKWLDLKYCENLIELPTLPPNLEYLDAHGC 661

Query: 808 ASLVTLLDALKLC----KSDSTMI--ACLDSLKLLGNKSLAFSMLREYLEAVSN------ 855
             L  ++D L +     ++ ST I   C +  +   N   +++  +  L A         
Sbjct: 662 HKLEHVMDPLAIALITEQTCSTFIFTNCTNLEEDARNTITSYAERKCQLHACKCYDMGFV 721

Query: 856 TRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRGNN 915
           +R       PG E+P WF +Q  GS +      N +    + G A+C V     N +  +
Sbjct: 722 SRASFKTCFPGCEVPLWFQHQAVGSVLEKRLQPN-WCDNLVSGIALCAVVSFQDNKQLID 780

Query: 916 CFGSYPTHQLNCHIGHGI---YGIGFRDKFGQAGSDHLWLLYLS 956
           CF      +     G  I   + +G   + G+  SDH+++ Y S
Sbjct: 781 CFSVKCASEFKDDNGSCISSNFKVGSWTEPGKTNSDHVFIGYAS 824


>gi|351724311|ref|NP_001237821.1| candidate disease-resistance protein [Glycine max]
 gi|223452609|gb|ACM89631.1| candidate disease-resistance protein [Glycine max]
          Length = 577

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 155/346 (44%), Positives = 227/346 (65%), Gaps = 8/346 (2%)

Query: 1   MDSRCEKLRFLMDSGSSD-VRMIGICGMGGLGKTTIARVVYD--LISHEFEASGFLDNVR 57
           + SR   +R L+ +GS   V MIGI GMGG+GK+T+AR VY+  +I+ +F+   FL NVR
Sbjct: 194 LKSRVLHVRRLLHAGSDHGVHMIGIHGMGGVGKSTLARAVYNELIIAEKFDGLCFLANVR 253

Query: 58  EISSKGGLVSLQRQLLSQLLKLADNSIWNVFDGIDMLGSRLQRKKVLLVIDDVVDVKQLQ 117
           E S+K GL  LQ +LL ++L     S+ +   GI ++ SRL+ KKVLL+IDDV    QLQ
Sbjct: 254 ENSNKHGLEHLQGKLLLEILGEKSISLTSKQQGISIIQSRLKGKKVLLIIDDVDTHDQLQ 313

Query: 118 SLAGNREWFGSGSRIIITSRDEHLLKTHGVDEVYKPHGLNYDEALQLFNMKAFKTYQPLQ 177
           ++AG  +WFG GS+IIIT+RD+ LL +H V++ Y+   L+ + ALQL   +AFK  +   
Sbjct: 314 AIAGRPDWFGRGSKIIITTRDKQLLASHEVNKTYEMKELDENHALQLLTWQAFKKEKADP 373

Query: 178 ECVQLSARIIRYAGGLPLALEVLGSFLSGRSVDEWRSTLERLEIEPPSEILDILQISFDG 237
             V++  R++ YA GLPLALEV+GS L G+S+ EW S +++ +     EILDIL++SFD 
Sbjct: 374 TYVEVLHRVVTYASGLPLALEVIGSHLVGKSIQEWESAIKQYKRIAKKEILDILKVSFDA 433

Query: 238 LQELEKKIFLDIACFFKGNDRDYVTNFLEGCGFHPVIGIRVLIEKCLITVH--NNTLWMH 295
           L+E EKK+FLDIAC FKG     + +  + C  +    I VL+EK LI V   ++ + MH
Sbjct: 434 LEEEEKKVFLDIACCFKGWKLTELEHVYDDCMKNH---IGVLVEKSLIEVRWWDDAVNMH 490

Query: 296 DLLQELGQQIVQRQSPEELGKRSRLWKEEEVCHVLTESTGTELVEG 341
           DL+Q++G++I Q++S +E  KR RLW  +++  VL E++    V G
Sbjct: 491 DLIQDMGRRIDQQESSKEPRKRRRLWLTKDIIQVLEENSAMRRVGG 536


>gi|147787197|emb|CAN64645.1| hypothetical protein VITISV_042806 [Vitis vinifera]
          Length = 754

 Score =  267 bits (682), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 203/586 (34%), Positives = 303/586 (51%), Gaps = 106/586 (18%)

Query: 486  MKDCTSLITLPGKILMKSLEKLNLKSLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEH 545
            M++   LI  P  I MK+LE LN     +  SGLK              +FP I  +ME+
Sbjct: 153  MREDNKLICFPSIIDMKALEILNF----SGCSGLK--------------KFPNIQGNMEN 194

Query: 546  LSELHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK 605
            L EL+L  TAI  LP SI  L+GLVLL+LK C++L+ L  ++  LK L +L LSGCSKL+
Sbjct: 195  LLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLSTSICKLKSLENLSLSGCSKLE 254

Query: 606  KFPEIVRSMKDLSELFLDGTSIKEVPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLK 665
             FPE++ +M +L EL LDGT I+ +PSSIE L  L LLNL  CKNLV L + +  L SL+
Sbjct: 255  SFPEVMENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLVSLSNGMCNLTSLE 314

Query: 666  TLNLSGCFKLENVPETLGQIESLEELDISGTAV---PHS--------------------T 702
            TL +SGC +L N+P  LG ++ L +L   GTA+   P S                    T
Sbjct: 315  TLIVSGCLQLNNLPRNLGSLQRLAQLHADGTAIAQPPDSIVLLRNLQVLIYPGCKILAPT 374

Query: 703  SWYSYIPINLMR----KSVALKLP-SLSGLCSLRKLNLTDCNLMEGALPSDIGNLCSLKE 757
            S  S     L+       + L+LP S S   SL  L+++DC L+EGA+P+ I +L SLK+
Sbjct: 375  SLGSLFSFWLLHGNSSNGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIPNGICSLISLKK 434

Query: 758  LYLSKNSFVSLPTSITHLSKLLNIELEDCKRLQSLPQLPPNIRQVRVNGCASL------V 811
            L LS+N+F+S+P  I+ L+ L ++ L  C+ L  +P+LPP++R +  + C +L      V
Sbjct: 435  LDLSRNNFLSIPAGISELTNLKDLRLGQCQSLTGIPELPPSVRDIDAHNCTALLPGSSSV 494

Query: 812  TLLDALKLC----------------KSDSTMIACLDSLKLLGNKSLAFS--MLREYLEAV 853
              L  L+                  +++  +   +       + S+  S  M+++ LE +
Sbjct: 495  NTLQGLQFLFYNCSKPVEDQSSDDKRTELQIFPHIYVSSTASDSSVTTSPVMMQKLLENI 554

Query: 854  SNTRQHLSVVVPGSEIPEWFMYQNEGSSITVTRPSNLYNKKKLVGYAICCVFHVLKNSRG 913
            +      S+V PG+ IPEW  +QN GSSI +  P++ +     +G+A+C V   L     
Sbjct: 555  A-----FSIVFPGTGIPEWIWHQNVGSSIKIQLPTD-WXSDXFLGFALCSVLEHLP---- 604

Query: 914  NNCFGSYPTHQLNCHIGHGIYGIGFRDKFGQ--------AGSDHLWLLYLSRQTCYDIRL 965
                      ++ CH+   ++  G    FG          GS+H+WL Y   Q C  +RL
Sbjct: 605  ---------ERIICHLNSDVFNYGDLKDFGHDFHWTGNIVGSEHVWLGY---QPCSQLRL 652

Query: 966  PLESNLEPFESNHVNVSFEPW----LGQGLEVKMCGLHPVYMDEVE 1007
              + N +P E NH+ +SFE            VK CG+  +Y +++E
Sbjct: 653  -FQFN-DPNEWNHIEISFEAAHRFNSXTSNVVKKCGVCLIYAEDLE 696



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 178/375 (47%), Gaps = 35/375 (9%)

Query: 332 ESTGTELVEGIVLDNYHHENEVYLCASAKAFSKMTNLRLLKICNLQLPNGLEYLSNRL-- 389
           E  GTE +EGI+L N      +++  S +AF+ M NLRLLKI    L +      N+L  
Sbjct: 106 EIRGTEAIEGILL-NLSRLMRIHI--STEAFAMMKNLRLLKI-YWDLESAFMREDNKLIC 161

Query: 390 ----------RLLGWRGYP-LKFLPSNLQ--MDKTIEIYMCYSRIGELWKGIKHLDKLKV 436
                      +L + G   LK  P N+Q  M+  +E+Y+  + I EL   I HL  L +
Sbjct: 162 FPSIIDMKALEILNFSGCSGLKKFP-NIQGNMENLLELYLASTAIEELPSSIGHLTGLVL 220

Query: 437 MILSHSENLIRMP-DFTGAPNLEKLILEGCTRLYEIHPSLLLHNKLIILNMKDCTSLITL 495
           + L   +NL  +        +LE L L GC++L E  P ++ +   +   + D T +  L
Sbjct: 221 LDLKWCKNLKSLSTSICKLKSLENLSLSGCSKL-ESFPEVMENMDNLKELLLDGTPIEVL 279

Query: 496 PGKI-LMKSLEKLNLK------SLPTTISGLKCLSTLDVSGDLKFREFPEIVEHMEHLSE 548
           P  I  +K L  LNL+      SL   +  L  L TL VSG L+    P  +  ++ L++
Sbjct: 280 PSSIERLKGLVLLNLRKCKNLVSLSNGMCNLTSLETLIVSGCLQLNNLPRNLGSLQRLAQ 339

Query: 549 LHLEGTAIRGLPLSIELLSGLVLLNLKNCRSLEILPVTVSNLKCLRSLKLSGCSKLK-KF 607
           LH +GTAI   P SI LL  L +L    C+ L   P ++ +L     L  +  + +  + 
Sbjct: 340 LHADGTAIAQPPDSIVLLRNLQVLIYPGCKILA--PTSLGSLFSFWLLHGNSSNGIGLRL 397

Query: 608 PEIVRSMKDLSELFLDGTSIKE--VPSSIELLTKLELLNLSDCKNLVRLPSSIIALKSLK 665
           P    S + LS L +    + E  +P+ I  L  L+ L+LS   N + +P+ I  L +LK
Sbjct: 398 PSSFSSFRSLSNLDISDCKLIEGAIPNGICSLISLKKLDLSR-NNFLSIPAGISELTNLK 456

Query: 666 TLNLSGCFKLENVPE 680
            L L  C  L  +PE
Sbjct: 457 DLRLGQCQSLTGIPE 471


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.320    0.138    0.408 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,588,839,631
Number of Sequences: 23463169
Number of extensions: 705472445
Number of successful extensions: 2107190
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8308
Number of HSP's successfully gapped in prelim test: 23363
Number of HSP's that attempted gapping in prelim test: 1807342
Number of HSP's gapped (non-prelim): 125381
length of query: 1074
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 921
effective length of database: 8,769,330,510
effective search space: 8076553399710
effective search space used: 8076553399710
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 83 (36.6 bits)