Your job contains 1 sequence.
>001462
MAKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSP
VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM
DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF
KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT
LFSGFDDNLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHV
EPYGVGAPEPDQSICTEVKFNPPGSHSLEKVGIIGRSTSGFRSTSPDYETKDIKTIYVDS
TGGKPVASQKIGPLNSPKVVPPLDSEEISDLQTEKQNPAIGVPELSNGQALDKSFIVPSI
VPQESPAGKDSSFSAGESITFSRTKPGMLLRPAHVQKPSNSKYDAERLSTAAESESLNSK
KSDLDSAVDPNVKTRFVSSDGARKSCEEKDCHIKTITGEIENIFSPQKPPKQEDGDKSRD
CSKITNSVKFVNGVAVVPGRTRSLVERFERREKVNSNEDLAANVIPQTRLSRNEDQAADV
TPQTTLSSNEDHVANVTSQTRLNGNEYQAATAPQQTRLSSNIDPVANVTPQTLPSGNEDQ
AANVTPQTRPSSNEDQTANVIRQTRPSSNEDQAVIVNPQTRRHSNEDQASNIAPYTRHDR
NEDRATNITPQSKISRNQDQATNITSHMGLNSNENRATNIPSRSRLNSREDQSTNTPSQT
IVNGAENKATKTPTQMRLKSSENQVTSTPPRARLNSSIEGQATNIPIRRRFNRNVDQTTN
VTRHRRSISNTDQATSTTAHVAVKNNDDIATVITPHVTALSYERTSTPKGEPQISGRDTP
VANEGEAVESLMETHDIFISTLRSRLTKLQVVRHFWERNDIKGGINALRKLPDHSVQADV
MSVLMEKMEILNLDLFLCLLPMLMGLLDSKMERHASISLEMLLKLVVVFGPMIHSTLSAP
PAVGVDLHAEQRRECCNRCFMQLQKIQKILPILERRGGLLAKCAHELNLVLQES
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001462
(1074 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2154438 - symbol:AT5G23430 "AT5G23430" species... 1228 8.0e-168 2
TAIR|locus:2150788 - symbol:AT5G08390 "AT5G08390" species... 1240 1.5e-166 2
TAIR|locus:2202129 - symbol:AT1G11160 "AT1G11160" species... 1521 4.9e-156 1
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 864 2.7e-107 3
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 859 5.7e-107 3
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 859 1.2e-106 3
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 858 1.7e-103 2
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 863 2.2e-103 2
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 825 8.4e-102 2
UNIPROTKB|Q5ZIU8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 849 7.5e-101 2
UNIPROTKB|F1P0F4 - symbol:KATNB1 "Katanin p80 WD40 repeat... 830 1.1e-97 2
UNIPROTKB|E3W9A3 - symbol:KATNB1 "Katanin p80 WD40 repeat... 818 1.4e-97 2
UNIPROTKB|E1BQV9 - symbol:KATNB1 "Katanin p80 WD40 repeat... 792 1.1e-93 2
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 693 1.5e-70 2
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 634 2.9e-61 1
UNIPROTKB|F1RF38 - symbol:KATNB1 "Uncharacterized protein... 431 1.1e-57 3
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 594 6.3e-57 1
FB|FBgn0040207 - symbol:kat80 "katanin 80" species:7227 "... 511 2.6e-52 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 389 5.9e-32 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 332 8.8e-29 1
ZFIN|ZDB-GENE-030131-5143 - symbol:prpf4 "PRP4 pre-mRNA p... 341 4.2e-28 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 307 4.2e-26 1
RGD|621047 - symbol:Plrg1 "pleiotropic regulator 1" speci... 322 8.0e-26 1
UNIPROTKB|Q2KID6 - symbol:PLRG1 "Pleiotropic regulator 1"... 319 1.7e-25 1
MGI|MGI:1858197 - symbol:Plrg1 "pleiotropic regulator 1, ... 319 1.7e-25 1
UNIPROTKB|O43660 - symbol:PLRG1 "Pleiotropic regulator 1"... 319 1.8e-25 1
UNIPROTKB|E2QYT6 - symbol:PLRG1 "Uncharacterized protein"... 319 1.8e-25 1
UNIPROTKB|F1NNQ9 - symbol:PRPF4 "Uncharacterized protein"... 319 1.9e-25 1
UNIPROTKB|E1BVN5 - symbol:PLRG1 "Uncharacterized protein"... 318 2.3e-25 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 280 3.2e-25 2
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 297 4.9e-25 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 296 6.2e-25 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 296 6.2e-25 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 296 6.2e-25 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 295 8.0e-25 1
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 318 1.0e-24 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 294 1.0e-24 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 294 1.0e-24 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 294 1.0e-24 1
SGD|S000006072 - symbol:PRP46 "Member of the NineTeen Com... 308 1.1e-24 1
UNIPROTKB|Q3MHE2 - symbol:PRPF4 "U4/U6 small nuclear ribo... 312 1.2e-24 1
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 293 1.3e-24 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 292 1.7e-24 1
UNIPROTKB|F1PZB0 - symbol:PRPF4 "Uncharacterized protein"... 311 1.8e-24 1
UNIPROTKB|I3LDL8 - symbol:PRPF4 "Uncharacterized protein"... 311 1.8e-24 1
UNIPROTKB|O43172 - symbol:PRPF4 "U4/U6 small nuclear ribo... 310 2.0e-24 1
MGI|MGI:1917302 - symbol:Prpf4 "PRP4 pre-mRNA processing ... 309 2.6e-24 1
RGD|1311303 - symbol:Prpf4 "PRP4 pre-mRNA processing fact... 308 3.4e-24 1
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 305 3.9e-24 2
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 290 4.0e-24 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 309 4.0e-24 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 286 7.3e-24 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 292 9.2e-24 2
FB|FBgn0036733 - symbol:U4-U6-60K "U4-U6 small nuclear ri... 305 9.5e-24 1
FB|FBgn0030365 - symbol:Tango4 "Transport and Golgi organ... 302 1.0e-23 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 284 1.2e-23 1
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 308 1.2e-23 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 292 1.5e-23 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 283 1.5e-23 1
POMBASE|SPBP22H7.07 - symbol:prp5 "WD repeat protein Prp5... 300 1.5e-23 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 290 1.6e-23 2
DICTYBASE|DDB_G0287337 - symbol:taf5 "TFIID subunit" spec... 308 1.7e-23 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 282 2.0e-23 1
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 291 3.0e-23 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 301 3.1e-23 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 292 3.2e-23 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 280 3.2e-23 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 295 4.1e-23 1
DICTYBASE|DDB_G0275045 - symbol:gpbB "Guanine nucleotide-... 279 4.1e-23 1
GENEDB_PFALCIPARUM|PF08_0019 - symbol:PF08_0019 "receptor... 278 5.2e-23 1
UNIPROTKB|Q8IBA0 - symbol:PfRACK "Receptor for activated ... 278 5.2e-23 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 289 5.2e-23 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 284 5.4e-23 2
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 296 5.6e-23 2
ZFIN|ZDB-GENE-040426-2787 - symbol:plrg1 "pleiotropic reg... 297 5.7e-23 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 276 8.5e-23 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 276 8.5e-23 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 276 8.5e-23 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 276 8.5e-23 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 276 8.5e-23 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 276 8.5e-23 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 287 9.1e-23 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 286 1.2e-22 2
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 286 2.0e-22 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 286 2.0e-22 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 271 2.9e-22 1
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 291 3.1e-22 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 284 3.6e-22 1
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 298 4.1e-22 2
FB|FBgn0020618 - symbol:Rack1 "Receptor of activated prot... 269 4.8e-22 1
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 268 6.1e-22 1
RGD|1311332 - symbol:Taf5 "TAF5 RNA polymerase II, TATA b... 292 6.7e-22 1
UNIPROTKB|Q15542 - symbol:TAF5 "Transcription initiation ... 292 6.7e-22 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 267 7.8e-22 1
UNIPROTKB|E1BEN8 - symbol:TAF5 "Uncharacterized protein" ... 291 8.6e-22 1
UNIPROTKB|E2RE41 - symbol:TAF5 "Uncharacterized protein" ... 291 8.7e-22 1
POMBASE|SPAC6B12.15 - symbol:cpc2 "RACK1 ortholog Cpc2" s... 266 1.0e-21 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 285 1.1e-21 2
UNIPROTKB|G4MNI3 - symbol:MGG_05616 "Pre-mRNA-splicing fa... 285 1.1e-21 1
TAIR|locus:2092707 - symbol:RACK1C_AT "AT3G18130" species... 243 1.3e-21 2
WARNING: Descriptions of 1691 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 1228 (437.3 bits), Expect = 8.0e-168, Sum P(2) = 8.0e-168
Identities = 216/304 (71%), Positives = 260/304 (85%)
Query: 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
KR YKLQEFVAHSA VNC+ IG+K+ R L+TGG+D KVNLWAIGKP A++SL G SS +D
Sbjct: 4 KRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGID 63
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
SV FD++EVLV AGA++G IKLWDLEE+K+VRTLTGH+SNC +V+FHPFGEFFASG +DT
Sbjct: 64 SVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
NLKIWDIRKKGCIHTYKGHTRG+N +RFTPDGRWVVSGG DN+VKVWDLTAGKLL +FK
Sbjct: 124 NLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKS 183
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLF 242
HEG I+S+DFHP EFLLATGSADRTVKFWDLETFELIGS PE GV ++F+PDG+T+
Sbjct: 184 HEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVL 243
Query: 243 SGFDDNLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHVEP 302
G ++LK++SWEP+ CHD VD+GWS L D+ +++GKLLGCS+ ++ VG+WV D+S EP
Sbjct: 244 CGLQESLKIFSWEPIRCHDGVDVGWSRLSDMNVHEGKLLGCSYNQSCVGVWVVDLSRTEP 303
Query: 303 YGVG 306
G
Sbjct: 304 CMAG 307
Score = 426 (155.0 bits), Expect = 8.0e-168, Sum P(2) = 8.0e-168
Identities = 137/519 (26%), Positives = 239/519 (46%)
Query: 571 REKVNSNEDLAANVIPQTRLSRNEDQAADVTP---QTTLSSNEDHVANVTSQTRLNGNEY 627
R+ V N++ + V+ + +S+N D T + ++S N D T +
Sbjct: 324 RDPVVLNDNNSKTVLGKLSVSQNVDPLLKETKSLGRLSVSQNSDPSTKETKSIGRSSTSQ 383
Query: 628 QAATAPQQTRLSSNIDPVAN--VTPQTLPSGNEDQAANVTPQTRPSSNEDQTANVIRQ-- 683
+ ++ ++++ + N V+ ++ + TP S+N + + +
Sbjct: 384 NSESSMKESKPLGRLSVSQNSDVSKESRTFSSTGSLPG-TPHRVSSTNVSKATSGVSTAV 442
Query: 684 TRPSSNEDQAVIVNPQTRR-HSNEDQASNIAPYTRHDRNEDRATNITPQSKI-SRNQDQA 741
+ +++ NP+ + D A I P R D ++AT + I +R +
Sbjct: 443 SNAATSRRNFTKANPKANPVNKAADFAPVIVP--RADPRIEQATESRAELDIIARTMPYS 500
Query: 742 TNITSHMGLNSNENRATNIPSRSRLNSREDQST---NTPSQTIVNGAENKATKTPTQMRL 798
S+ N ++P S L E Q N P + G + + T+ +
Sbjct: 501 LQAADSRRSPSSRNNP-DLPDASVLEMSESQPVEPNNIPDGGTLPGGK-VGMRGATERSI 558
Query: 799 KSSE-NQVTSTPPRARLNSSIEGQATNIP-IRRRFNRNVDQTTNVT--RHRRSISNTDQA 854
+ + R+R+ S N + R NR+ T + R + + N ++
Sbjct: 559 NDFRYKRYGRSNSRSRMGSPPRNHDENYDLVSHRSNRDPSPTESQKGGRFQSLVINRERR 618
Query: 855 TSTTAHVAVKNNDDIATVITPHVTALSYERTSTPKGEPQISGRDTPVANEGEAVESLMET 914
+ +N + P++ + + P G D+P +E VE +M
Sbjct: 619 GRFSNFEGPVSNFSSGNMPAPNIRPSNMFK-QRGNHMPVEQGIDSP--SEENIVEDIMGK 675
Query: 915 HDIFISTLRSRLTKLQVVRHFWERNDIKGGINALRKLPDHSVQADVMSVLMEKMEIXXXX 974
H+ F+S+++SRL KLQVVR +WERND+K I ++ K+ D++V ADV+ ++ E+ EI
Sbjct: 676 HNQFVSSMQSRLAKLQVVRRYWERNDVKNSIGSIEKMADNAVTADVLGIITERNEILTLD 735
Query: 975 XXXXXXXXXXXXXDSKMERHASISLEMLLKLVVVFGPMIHSTLSAPPAVGVDLHAEQRRE 1034
S M++H S+SL++LLKLV ++G I+S+LSAP +VGVD+ AEQR E
Sbjct: 736 NCTSLLPLLTALLGSGMDQHLSVSLDLLLKLVRLYGSPIYSSLSAPASVGVDIEAEQRIE 795
Query: 1035 CCNRCFMQLQKIQKILPILERRGGLLAKCAHELNLVLQE 1073
+RCF++L+K++ LP L RRGGL+AK ELNL QE
Sbjct: 796 RYSRCFVELEKVKACLPSLARRGGLVAKSVLELNLAFQE 834
Score = 79 (32.9 bits), Expect = 3.7e-131, Sum P(2) = 3.7e-131
Identities = 61/270 (22%), Positives = 103/270 (38%)
Query: 350 TKDIKTIYVDSTGGKPVASQKIGPLNSPKVVPPLDSEEISDLQTEKQNPAIGVPELSN-G 408
+K+ +T STG P ++ N K + S +S+ T ++N P+ +
Sbjct: 407 SKESRTF--SSTGSLPGTPHRVSSTNVSKATSGV-STAVSNAATSRRNFTKANPKANPVN 463
Query: 409 QALDKSFIVPSIVPQESPAGKDSSFSAGESITFSRTKPGMLLRPAHVQKPSN-SKYDAER 467
+A D P IVP+ P + ++ S E +RT P L + PS+ + D
Sbjct: 464 KAAD---FAPVIVPRADPRIEQATESRAELDIIARTMPYSLQAADSRRSPSSRNNPDLPD 520
Query: 468 LSTAAESESLNSKKSDL-DSAVDPNVKTRFVSSDGARKSCEEKDCHIKTITGEIENIFSP 526
S SES + +++ D P K V GA + D K G +
Sbjct: 521 ASVLEMSESQPVEPNNIPDGGTLPGGK---VGMRGATER-SINDFRYKRY-GRSNSRSRM 575
Query: 527 QKPPKQEDGDK---SRDCSKITNSVKFVNGVAVVPGRTRSLVERFERREKVNSNEDLAAN 583
PP+ D + S ++ + + G GR +SLV ERR + ++ E
Sbjct: 576 GSPPRNHDENYDLVSHRSNRDPSPTESQKG-----GRFQSLVINRERRGRFSNFEG---- 626
Query: 584 VIPQTRLSRNEDQAADVTPQTTLSSNEDHV 613
P + S A ++ P +H+
Sbjct: 627 --PVSNFSSGNMPAPNIRPSNMFKQRGNHM 654
Score = 57 (25.1 bits), Expect = 7.9e-129, Sum P(2) = 7.9e-129
Identities = 29/143 (20%), Positives = 53/143 (37%)
Query: 381 PPLDSEEISDLQTEKQNPAIGVPELSNGQALDKSFIVPSIVPQESPAGKDSSFSAGESIT 440
PP + +E DL + + N E G S+V G+ S+F S
Sbjct: 578 PPRNHDENYDLVSHRSNRDPSPTESQKGGRFQ------SLVINRERRGRFSNFEGPVSNF 631
Query: 441 FSRTKPGMLLRPAHVQKPSNSKYDAERLSTAAESESLNSKKSDLDSAVDPNVKTRFVSSD 500
S P +RP+++ K + E+ + E++ + ++++R
Sbjct: 632 SSGNMPAPNIRPSNMFKQRGNHMPVEQGIDSPSEENIVEDIMGKHNQFVSSMQSRLAKLQ 691
Query: 501 GARKSCEEKDCHIKTITGEIENI 523
R+ E D +K G IE +
Sbjct: 692 VVRRYWERND--VKNSIGSIEKM 712
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 1240 (441.6 bits), Expect = 1.5e-166, Sum P(2) = 1.5e-166
Identities = 262/551 (47%), Positives = 341/551 (61%)
Query: 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
KR YKLQEFVAHSA VNC+ IG+K+ R L+TGG+D KVNLWAIGKP A++SL G SS +D
Sbjct: 4 KRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGID 63
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
SV FD++E LV AGA++G IKLWDLEE+K+VRTLTGH+SNC +V FHPFGEFFASG +DT
Sbjct: 64 SVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDT 123
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
NLKIWDIRKKGCIHTYKGHTRG+N +RFTPDGRW+VSGG DNVVKVWDLTAGKLLH+FK
Sbjct: 124 NLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKS 183
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLF 242
HEG I+S+DFHP EFLLATGSAD+TVKFWDLETFELIGS E TGV +TF+PDG+++
Sbjct: 184 HEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVL 243
Query: 243 SGFDDNLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHVEP 302
G ++LK++SWEP+ CHD VD+GWS L D+ +++GKLLGCS+ +N VG+WV D+S EP
Sbjct: 244 CGLQESLKIFSWEPIRCHDGVDVGWSNLSDMNVHEGKLLGCSYNQNCVGVWVVDLSRTEP 303
Query: 303 YGVGAPEPDQ--SICTEVKFNPPGSHSLEKVGIIGRSTSGFRSTSPDY-ETKDIKTIYVD 359
GA + + + + G + I+G+ G + P ETK + + V
Sbjct: 304 MSGGATQSNSHPEKTSGSGRDQAGLNDNSSKVILGK-LPGSQKVDPLLKETKSLGKLSVS 362
Query: 360 STG----------GKPVASQKIGPL-NSPKVVPPLDSEEISDLQTEKQNPAIGVPELSNG 408
G+ SQ PL PK + + SD T K++ + S G
Sbjct: 363 QNSDPLPKDTKSTGRSSVSQSSDPLVKEPKPLGRFSATHSSD--TVKESRTLS----STG 416
Query: 409 QALDKSFIVPSIVPQESPAGKDSSF--SAGESITFSRTKPGMLLRPAHVQKPSNSKYDAE 466
D V +S +G + +A F + P P V K
Sbjct: 417 SVSDSPHRVTLTSAPKSASGISTVVPNAAASKRNFGKANPKA--NPPVVNKEDYFPVIVP 474
Query: 467 RLSTAAESESLNSKKSDLDSAVDP-NVKTRFVSSDGARKSCEEKDCHIKTITGEIENIFS 525
R E S + + D+ P +++++ S S E D ++ ++
Sbjct: 475 RTEPIIEQASESRAELDIIGRTMPYSLQSKAADSRRLSSSRNEPDLPTSSLLERSQS--Q 532
Query: 526 PQKPPKQEDGD 536
P +P +DG+
Sbjct: 533 PIEPITLQDGN 543
Score = 402 (146.6 bits), Expect = 1.5e-166, Sum P(2) = 1.5e-166
Identities = 104/291 (35%), Positives = 153/291 (52%)
Query: 800 SSENQVTSTPPRARLNSS--IEGQATNIPIRRRFNRNVDQTTNVTRHR--RSISNTDQAT 855
S E T R S + G+ + + R RN D+ +++ + R S T+
Sbjct: 547 SDEGGSWDTAERTNKESKCRVFGRFNSRSLVRSPPRNHDENSDLISYNANRDSSPTESRK 606
Query: 856 STTAHVAVKNNDD---IATVITPHVTALSYERTSTPKGEP----QISGRDTPV------A 902
H V N + + P V++ S + P P + G PV A
Sbjct: 607 GGRLHSLVLNRERRGRFSNFEGP-VSSSSGGNMTAPNSRPSNMLKQRGNHVPVDQGITSA 665
Query: 903 NEGEAVESLMETHDIFISTLRSRLTKLQVVRHFWERNDIKGGINALRKLPDHSVQADVMS 962
+E + V +M HD F+S++ SRL KLQVVR +WERNDIK I+++ K+ D++V ADV+
Sbjct: 666 SEEDIVADIMGQHDQFVSSMHSRLAKLQVVRRYWERNDIKNSISSIEKMADNAVIADVLL 725
Query: 963 VLMEKMEIXXXXXXXXXXXXXXXXXDSKMERHASISLEMLLKLVVVFGPMIHSTLSAPPA 1022
++ E+ EI S M+ H S+ L++LLKLV ++G I+S+LSAP +
Sbjct: 726 IVNERPEILTLDTCTSLLPLLTALLGSNMDSHLSVCLDLLLKLVRMYGSQIYSSLSAPSS 785
Query: 1023 VGVDLHAEQRRECCNRCFMQLQKIQKILPILERRGGLLAKCAHELNLVLQE 1073
VGVD+ AEQR E + CF++ +KI+ LP L RRG L+AK HELNL QE
Sbjct: 786 VGVDIEAEQRMERYSCCFVEFEKIKACLPSLARRGNLVAKTLHELNLTFQE 836
Score = 43 (20.2 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 36/185 (19%), Positives = 70/185 (37%)
Query: 651 QTLP-SGNEDQAANVTPQTRPSSNEDQ------TANVIRQTRPSSNEDQAVIVNPQTRRH 703
+T P SG Q+ N P+ S DQ ++ VI P S + ++ ++
Sbjct: 300 RTEPMSGGATQS-NSHPEKTSGSGRDQAGLNDNSSKVILGKLPGSQKVDPLLKETKSLGK 358
Query: 704 SNEDQASNIAPYTRHDRNEDRATNITPQSKISRNQDQATNITSHMGLNSNENRATNIPSR 763
+ Q S+ P + T T +S +S++ D +G S + + +
Sbjct: 359 LSVSQNSDPLP---------KDTKSTGRSSVSQSSDPLVKEPKPLGRFSATHSSDTV-KE 408
Query: 764 SRLNSREDQSTNTPSQTIVNGAENKATKTPTQM-RLKSSENQVTSTPPRARLNSSIEGQA 822
SR S +++P + + A A+ T + +S+ P+A N + +
Sbjct: 409 SRTLSSTGSVSDSPHRVTLTSAPKSASGISTVVPNAAASKRNFGKANPKA--NPPVVNKE 466
Query: 823 TNIPI 827
P+
Sbjct: 467 DYFPV 471
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 1521 (540.5 bits), Expect = 4.9e-156, P = 4.9e-156
Identities = 404/976 (41%), Positives = 539/976 (55%)
Query: 1 MAKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSP 60
MAKRGYKLQEFVAHS NVNC+SIGKK R L+TGGDD KVNLW+IGK T+ MSLCG +SP
Sbjct: 1 MAKRGYKLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSP 60
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
VDSVAF+S EVLVLAGAS+GVIKLWDLEESKMVR TGH+SNC+AVEFHPFGEF ASG
Sbjct: 61 VDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSS 120
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
DTNL++WD RKKGCI TYKGHTRGI+TI F+PDGRWVVSGG DNVVKVWDLTAGKLLH+F
Sbjct: 121 DTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEF 180
Query: 181 KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
K HEG IRS+DFHPLEFLLATGSADRTVKFWDLETFELIG+TRPE TGV AI FHPDG+T
Sbjct: 181 KCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQT 240
Query: 241 LFSGFDDNLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHV 300
LF G DD LKVYSWEPVIC D VDMGWSTLGD CIN+GK +GCS+YRNSVGIWV+D+S +
Sbjct: 241 LFCGLDDGLKVYSWEPVICRDGVDMGWSTLGDFCINEGKFIGCSYYRNSVGIWVSDISEL 300
Query: 301 EPYGVGAPEPDQSICTEVKFNPPGSHSLEKVGIIGRSTSGFR-STSPDYETKDIKTIYVD 359
EPYG A D++ C +F+ S E++G SG R S SPDYET++IK IYVD
Sbjct: 301 EPYG--AVSEDKNECMVKRFSVLNDQS-ERMG------SGPRGSVSPDYETREIKNIYVD 351
Query: 360 STGGKPVASQKIGPLNSPKVVPPLDSEEISDLQTEKQNPAIGVP---ELSNGQALDKSFI 416
STGG +Q G L K PL+S +++ + +EKQN A P + S+ S
Sbjct: 352 STGGNLNVAQNPGSL---KATLPLESGKVATMVSEKQNAAYFGPAGDKYSSTSRDSDSGE 408
Query: 417 VPSIVPQES-PAGKDSS------FSAGESIT-FSRTKPGMLLRPAHVQKPSNSKYDAERL 468
S +ES P + S +++ F +K +++ A +K + + +
Sbjct: 409 ESSYSERESIPFSRTKSGMLLRPAHVRKTLAKFEESKQSAVVQSATRKKSGLAVEEEPQT 468
Query: 469 STAAESESLNSKKSDLDSAVDPNVKTRFVSSDGARKSCEEKDCHIKTITGEIENIFSPQK 528
A SE SK D + ++ + +F EK + T E +F K
Sbjct: 469 QNAFLSEQNASKPFDAEDSIIKGITNKF-----------EKALSSEPPTDEANRMFL--K 515
Query: 529 PPK--QEDGDKSRDCSKITNS--VKFVNG-------VAVVPGRTRSLVERFERR-EKVNS 576
PP+ + K D + ++ F G V +P +T ++ R + E+ N+
Sbjct: 516 PPRIHRSSNSKYNDTRRAMSADPATFGKGGMENSGDVEDIPSKTERVLSREKPGDEQKNT 575
Query: 577 NEDLAANVIPQTRLSRNEDQAADVTPQTT--LSSNEDHVANVTSQTRLNGNEYQAATAPQ 634
+ + ++ + + T E + T + N P+
Sbjct: 576 EYPSGSRELNPVKIVEGVNVVSGRTRSLVEKFERGEKTTHTEGASTTIEQNNNAVQEDPR 635
Query: 635 QTRLSSNIDPV-----ANVTP-QTLPSG-NEDQAANVTPQTRPSSNEDQTANVIRQTRPS 687
+T + PV A TP + +P N D +NVT P + Q A R S
Sbjct: 636 KTSRQTGETPVISTRRARSTPARVMPIVLNRD--SNVTSDEPPLT---QPA------RTS 684
Query: 688 SNEDQAVIVNPQTRRHSNEDQASNIAPYTRHDRNEDRATNITPQSKISRNQDQATNITSH 747
S VI+N + + D+ S +A T+ R I P ++ NQ ATNITS
Sbjct: 685 SFPVMPVILNQAS--NVTYDEPS-VA-LTQESRTSH--ARILP---VTFNQ--ATNITSE 733
Query: 748 MGLNSNENRATNIPSRSR-LNSREDQSTNTPSQTIVNGAENKATKTPTQMRLKSSENQVT 806
+ + N +R R + + S P ++ + A PT +L S N +
Sbjct: 734 EASVTLRRQRRNSAARVRPVLLSQATSHECPVTSVRPLRTSPARVMPT--KLNQSVNMTS 791
Query: 807 STPPRARLN--SSIEGQATNIPIRRRFNRNVDQT--TNVT--------RHRRSISNTDQA 854
T A ++ S + AT I + + +D+T T + + +IS+ +
Sbjct: 792 DTSHIASMHRVSPTQMLATPTVIDQVADMTLDETHATQIQPACDNMPQKEEPNISDREDD 851
Query: 855 TSTTAHVAVKNNDDIATVITPHVTALSYER----TSTPKGEPQISGRDTPVANEGEAVES 910
+ T ++ + +N+ ++T + +T L R S KG + T + + + +
Sbjct: 852 SDITENLMLTHNEFLST-LQSRLTKLQIVRHFWERSDVKGAIGALRKLTDQSVQADVISI 910
Query: 911 LMETHDIFISTLRSRL 926
L E +I + S+L
Sbjct: 911 LTEKIEILTLDMFSQL 926
Score = 524 (189.5 bits), Expect = 7.0e-47, P = 7.0e-47
Identities = 180/578 (31%), Positives = 276/578 (47%)
Query: 519 EIENIF-SPQKPPKQEDGDKSRDCSKITNSVKFVNGVAVVPGRTRSLVERFERREKVNSN 577
+ +N F S Q K D + S ITN KF ++ P T F + +++ +
Sbjct: 467 QTQNAFLSEQNASKPFDAEDSI-IKGITN--KFEKALSSEPP-TDEANRMFLKPPRIHRS 522
Query: 578 EDLAANVIPQTRLSRNEDQAADVTPQTTLSSNEDHVANVTSQTRLN---GNEYQAATAPQ 634
+ N TR + + D A S + + + + T + G+E + P
Sbjct: 523 SNSKYN---DTRRAMSADPATFGKGGMENSGDVEDIPSKTERVLSREKPGDEQKNTEYPS 579
Query: 635 QTRLSSNIDPVANVTPQTLPSGNEDQAANVTPQTRPSSNEDQTANVIRQTRPSSNEDQAV 694
+R ++PV V + SG + +++ + + I Q + ED
Sbjct: 580 GSR---ELNPVKIVEGVNVVSGRTRSLVEKFERGEKTTHTEGASTTIEQNNNAVQEDPR- 635
Query: 695 IVNPQTRRHSNEDQASNIAPYTRHDRNED-RATNIT--PQSKISRNQD---QATNITSHM 748
+T R + E + TR R+ R I S ++ ++ Q +S
Sbjct: 636 ----KTSRQTGETPVIS----TRRARSTPARVMPIVLNRDSNVTSDEPPLTQPARTSSFP 687
Query: 749 GLNSNENRATNIPSRSRLNSREDQSTNTPSQTIVNGAENKATKTPTQMRLKSSENQVTST 808
+ N+A+N+ + + Q + T I+ N+AT ++ + Q ++
Sbjct: 688 VMPVILNQASNV-TYDEPSVALTQESRTSHARILPVTFNQATNITSEEASVTLRRQRRNS 746
Query: 809 PPRAR---LN--SSIEGQATNI-PIR----RRFNRNVDQTTNVTRHRRSISNTDQATSTT 858
R R L+ +S E T++ P+R R ++Q+ N+T I++ + + T
Sbjct: 747 AARVRPVLLSQATSHECPVTSVRPLRTSPARVMPTKLNQSVNMTSDTSHIASMHRVSPTQ 806
Query: 859 AHVAVKNNDDIA--TVITPHVTALSYERTSTP-KGEPQISGRDTPVANEGEAVESLMETH 915
D +A T+ H T + + P K EP IS R+ ++ + E+LM TH
Sbjct: 807 MLATPTVIDQVADMTLDETHATQIQPACDNMPQKEEPNISDRE----DDSDITENLMLTH 862
Query: 916 DIFISTLRSRLTKLQVVRHFWERNDIKGGINALRKLPDHSVQADVMSVLMEKMEIXXXXX 975
+ F+STL+SRLTKLQ+VRHFWER+D+KG I ALRKL D SVQADV+S+L EK+EI
Sbjct: 863 NEFLSTLQSRLTKLQIVRHFWERSDVKGAIGALRKLTDQSVQADVISILTEKIEILTLDM 922
Query: 976 XXXXXXXXXXXXDSKMERHASISLEMLLKLVVVFGPMIHSTLSAPPAVGVDLHAEQRREC 1035
S+ ER ++SL+MLLKLV VFG +I ST+SAP VGVDLHA +R E
Sbjct: 923 FSQLVPVLTSLLGSRTERPVNVSLDMLLKLVAVFGTVIRSTVSAPRIVGVDLHANERLEI 982
Query: 1036 CNRCFMQLQKIQKILPILERRGGLLAKCAHELNLVLQE 1073
C C L KIQ+ILP+L RRGGL+ + A ELNLVLQE
Sbjct: 983 CQICSAGLHKIQRILPVLARRGGLITRKAQELNLVLQE 1020
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 864 (309.2 bits), Expect = 2.7e-107, Sum P(3) = 2.7e-107
Identities = 150/331 (45%), Positives = 231/331 (69%)
Query: 1 MAKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSP 60
+ K +KLQE VAH++NV+ + +GK + R L TGGDD +VNLW+I KP +MSL G +SP
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
V+SV ++ E L++AG+ +G I++WDLE +K++RTL GHK+N +++FHP+GEF ASG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
DTN+K+WDIR+KGC+ Y+GH++ + +RF+PDG+W+ S D+ VK+WDLTAGK++ +F
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 181 KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
H G + ++FHP E+LLA+GS+DRT++FWDLE F+++ E V ++ F+PDG
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCC 245
Query: 241 LFSGFDDNLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHV 300
L+SG D+L+VY WEP C D V + W + DL I + +L+G +F +++V +V D++ V
Sbjct: 246 LYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVVDLTRV 305
Query: 301 EPYGVGAPEPDQSICTEVKFNPPGSHSLEKV 331
G +P Q+ + + P SL ++
Sbjct: 306 TRTGTVTQDPVQASQPQTQQTPNPGVSLRRI 336
Score = 182 (69.1 bits), Expect = 2.7e-107, Sum P(3) = 2.7e-107
Identities = 45/166 (27%), Positives = 74/166 (44%)
Query: 906 EAVESLMETHDIFISTLRSRLTKLQVVRHFWERNDIKGGINALRKLPDHSVQADVMSVLM 965
+A+ + + HD L SR L VR W DIK +++ + D SV D+++++
Sbjct: 486 DAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTTGDIKTSVDSAVAINDLSVVVDLLNIVN 545
Query: 966 EKMEIXXXXXXXXXXXXXXXXXDSKMERHASISLEMLLKLVVVFGPMIHSTLSAPPAVGV 1025
+K + SK E + L ++ F P+I L+APP+VGV
Sbjct: 546 QKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAAPPSVGV 605
Query: 1026 DLHAEQRRECCNRCFMQLQKIQKILPILERRGGLLAKCAHELNLVL 1071
D+ E+R C CF QL+ I ++ G EL+L++
Sbjct: 606 DISREERLHKCRLCFKQLKSISGLVKSRSGLSGRHGSAFRELHLLM 651
Score = 73 (30.8 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 33/136 (24%), Positives = 53/136 (38%)
Query: 773 STNTPSQTIVNGAENKATKTPTQMRLKSSENQVTSTP-PRARLNSSIEGQATNIPIRRRF 831
S + S +V+ T T TQ +++S+ Q TP P L E +T +R
Sbjct: 291 SQSNVSSYVVDLTRVTRTGTVTQDPVQASQPQTQQTPNPGVSLRRIYERPSTTCSKPQRV 350
Query: 832 NRNVDQTTNVTRHRRSISNTDQATSTTAHVAVKNNDDIATVITPHVTALSYERTSTPKGE 891
N + RRS S+ D + ++N +D + P S RT + E
Sbjct: 351 KHNSES------ERRSPSSEDDKDERESRAEIQNAEDYNEIFQPKN---SISRTPPRRSE 401
Query: 892 PQISGRDTPVANEGEA 907
P + + +A EA
Sbjct: 402 PFPAPPEDDIATAKEA 417
Score = 58 (25.5 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 625 NEYQAATAPQQTRLSSNIDPVANVTPQTLPSGNEDQAANVTPQTRPSSNEDQTANVIRQT 684
N+ A Q+ +SS + + VT + + QA+ PQT+ + N + I +
Sbjct: 282 NDQLIGVAFSQSNVSSYVVDLTRVTRTGTVTQDPVQASQ--PQTQQTPNPGVSLRRIYE- 338
Query: 685 RPSSNEDQAVIVNPQTRRHSNEDQASNIAPYTRHDRNEDRA 725
RPS+ + PQ +H++E + + + D E RA
Sbjct: 339 RPSTTCSK-----PQRVKHNSESERRSPSSEDDKDERESRA 374
Score = 49 (22.3 bits), Expect = 2.7e-107, Sum P(3) = 2.7e-107
Identities = 40/179 (22%), Positives = 68/179 (37%)
Query: 586 PQTRLSRNEDQAADVTPQTTLSSNEDHVANVTSQTRL-NGNEYQAATAPQQTRLSSNIDP 644
P T S+ + + + S+ED S+ + N +Y P+ + +S P
Sbjct: 340 PSTTCSKPQRVKHNSESERRSPSSEDDKDERESRAEIQNAEDYNEIFQPKNS-ISRT--P 396
Query: 645 VANVTPQTLPSGNEDQAANVTPQTRPSSNEDQTANVIRQ---TRPS------SNEDQAVI 695
P P+ ED A ++PS D V Q RPS + + + VI
Sbjct: 397 PRRSEP--FPAPPEDDIATAKEASKPSPAMDVQLPVPSQEVPARPSVMTSTPAPKGEPVI 454
Query: 696 VNPQTRRHSNEDQASNIAPYTRHDRNEDRATNITPQSKISRNQD-QATNITS-HMGLNS 752
+ P TR +AS+ P + + + S+I + D +TS H L++
Sbjct: 455 I-PATRNEPIGLKASDFLPAVKVPQQAELVDE-DAMSQIRKGHDTMCVVLTSRHKNLDT 511
Score = 47 (21.6 bits), Expect = 4.4e-107, Sum P(3) = 4.4e-107
Identities = 39/172 (22%), Positives = 63/172 (36%)
Query: 742 TNITSHM-GLNSNENRATNIPSRSRLNSREDQSTNTPSQTIVNGAENKATKTPTQMRLKS 800
+N++S++ L T + + + Q T P ++ E +T R+K
Sbjct: 293 SNVSSYVVDLTRVTRTGTVTQDPVQASQPQTQQTPNPGVSLRRIYERPSTTCSKPQRVKH 352
Query: 801 SENQVTSTPPRARLNSSIEGQATNIPIRRRFNRNVDQTTNVTRH--RRSIS-----NTDQ 853
+ +P E +A I +N +++R RRS D
Sbjct: 353 NSESERRSPSSEDDKDERESRA-EIQNAEDYNEIFQPKNSISRTPPRRSEPFPAPPEDDI 411
Query: 854 ATSTTAHVAVKNNDDIATVITPHVTALSYERTSTP--KGEPQI--SGRDTPV 901
AT+ A D V + V A TSTP KGEP I + R+ P+
Sbjct: 412 ATAKEASKPSPAMDVQLPVPSQEVPARPSVMTSTPAPKGEPVIIPATRNEPI 463
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 859 (307.4 bits), Expect = 5.7e-107, Sum P(3) = 5.7e-107
Identities = 148/312 (47%), Positives = 224/312 (71%)
Query: 1 MAKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSP 60
+ K +KLQE VAH++NV+ + +GK + R L TGGDD +VNLW+I KP +MSL G +SP
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
V+SV ++ E L++AG+ +G I++WDLE +K++RTL GHK+N +++FHP+GEF ASG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
DTN+K+WDIR+KGC+ Y+GH++ + +RF+PDG+W+ S D+ VK+WDLTAGK++ +F
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 181 KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
H G + ++FHP E+LLA+GS+DRT++FWDLE F+++ E V ++ F+PDG
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCC 245
Query: 241 LFSGFDDNLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHV 300
L+SG D+L+VY WEP C D V + W + DL I + +L+G +F +++V +V D++ V
Sbjct: 246 LYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVVDLTRV 305
Query: 301 EPYGVGAPEPDQ 312
G A +P Q
Sbjct: 306 TRTGTVARDPVQ 317
Score = 178 (67.7 bits), Expect = 5.7e-107, Sum P(3) = 5.7e-107
Identities = 44/166 (26%), Positives = 74/166 (44%)
Query: 906 EAVESLMETHDIFISTLRSRLTKLQVVRHFWERNDIKGGINALRKLPDHSVQADVMSVLM 965
+A+ + + HD L SR L VR W DIK +++ + D SV D+++++
Sbjct: 486 DAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTMGDIKTSVDSAVAINDLSVVVDLLNIVN 545
Query: 966 EKMEIXXXXXXXXXXXXXXXXXDSKMERHASISLEMLLKLVVVFGPMIHSTLSAPPAVGV 1025
+K + SK E + L ++ F P+I L+APP+VGV
Sbjct: 546 QKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDMLAAPPSVGV 605
Query: 1026 DLHAEQRRECCNRCFMQLQKIQKILPILERRGGLLAKCAHELNLVL 1071
D+ E+R C C+ QL+ I ++ G EL+L++
Sbjct: 606 DISREERLHKCRLCYKQLKSISGLVKSKSGLSGRHGSTFRELHLLM 651
Score = 55 (24.4 bits), Expect = 5.7e-107, Sum P(3) = 5.7e-107
Identities = 28/125 (22%), Positives = 48/125 (38%)
Query: 788 KATKTPTQMRLKSSENQVTSTP---PRARLNSSIEGQATNIPIRRRFNRNVDQTTNVTRH 844
+ T+T T R +++ + P P A L E +T +R +N +
Sbjct: 304 RVTRTGTVARDPVQDHRPLAQPLPNPSAPLRRIYERPSTTCSKPQRVKQNSES------E 357
Query: 845 RRSISNTDQATSTTAHVAVKNNDDIATVITPHVTALSYERTSTPKGEPQISGRDTPVANE 904
RRS S+ D + ++N +D + P S RT + EP + + A
Sbjct: 358 RRSPSSEDDRDERESRAEIQNAEDYNEIFQPKN---SISRTPPRRSEPFPAPPEDDAATA 414
Query: 905 GEAVE 909
EA +
Sbjct: 415 KEAAK 419
Score = 48 (22.0 bits), Expect = 3.1e-106, Sum P(3) = 3.1e-106
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 365 PVASQKIGPLNSPKVVPPLDSEEISDLQTEKQNPAIGVPE 404
PV + P P ++P +E I L+ PA+ +P+
Sbjct: 440 PVVASTPAPKAEPAIIPATRNEPIG-LKASDFLPAVKIPQ 478
Score = 45 (20.9 bits), Expect = 6.4e-106, Sum P(3) = 6.4e-106
Identities = 38/180 (21%), Positives = 67/180 (37%)
Query: 586 PQTRLSRNEDQAADVTPQTTLSSNEDHVANVTSQTRL-NGNEYQAATAPQQTRLSSNIDP 644
P T S+ + + + S+ED S+ + N +Y P+ + +S P
Sbjct: 340 PSTTCSKPQRVKQNSESERRSPSSEDDRDERESRAEIQNAEDYNEIFQPKNS-ISRT--P 396
Query: 645 VANVTPQTLPSGNEDQAANVTPQTRPSSNED---QTANV-------IRQTRPSSNEDQAV 694
P P+ ED AA +PS D N+ + + P+ + A+
Sbjct: 397 PRRSEP--FPAPPEDDAATAKEAAKPSPAMDVQFPVPNLEVLPRPPVVASTPAPKAEPAI 454
Query: 695 IVNPQTRRHSNEDQASNIAPYTRHDRNEDRATNITPQSKISRNQD-QATNITS-HMGLNS 752
I P TR +AS+ P + + + S+I + D +TS H L++
Sbjct: 455 I--PATRNEPIGLKASDFLPAVKIPQQAELVDE-DAMSQIRKGHDTMCVVLTSRHKNLDT 511
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 859 (307.4 bits), Expect = 1.2e-106, Sum P(3) = 1.2e-106
Identities = 147/312 (47%), Positives = 224/312 (71%)
Query: 1 MAKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSP 60
+ K +KLQE VAH++NV+ + +GK + R L TGGDD +VNLW+I KP +MSL G +SP
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
V+SV ++ E L++AG+ +G I++WDLE +K++RTL GHK+N +++FHP+GEF ASG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
DTN+K+WDIR+KGC+ Y+GH++ + +RF+PDG+W+ S D+ VK+WDLTAGK++ +F
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 181 KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
H G + ++FHP E+LLA+GS+DRT++FWDLE F+++ E V ++ F+PDG
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCC 245
Query: 241 LFSGFDDNLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHV 300
L+SG D+L+VY WEP C D V + W + DL + + +L+G +F +++V +V D++ V
Sbjct: 246 LYSGCQDSLRVYGWEPERCFDVVLVSWGKVADLAVCNDQLIGVAFSQSNVSSYVVDLTRV 305
Query: 301 EPYGVGAPEPDQ 312
G A +P Q
Sbjct: 306 TRTGTVAQDPVQ 317
Score = 180 (68.4 bits), Expect = 1.2e-106, Sum P(3) = 1.2e-106
Identities = 44/166 (26%), Positives = 74/166 (44%)
Query: 906 EAVESLMETHDIFISTLRSRLTKLQVVRHFWERNDIKGGINALRKLPDHSVQADVMSVLM 965
+A+ + + HD L SR L VR W DIK +++ + D SV D+++++
Sbjct: 486 DAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTTGDIKTSVDSAVAINDLSVVVDLLNIVN 545
Query: 966 EKMEIXXXXXXXXXXXXXXXXXDSKMERHASISLEMLLKLVVVFGPMIHSTLSAPPAVGV 1025
+K + SK E + L ++ F P+I L+APP+VGV
Sbjct: 546 QKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAAPPSVGV 605
Query: 1026 DLHAEQRRECCNRCFMQLQKIQKILPILERRGGLLAKCAHELNLVL 1071
D+ E+R C C+ QL+ I ++ G EL+L++
Sbjct: 606 DISREERLHKCRLCYKQLKSISGLVKSKSSLSGRHGSAFRELHLLM 651
Score = 50 (22.7 bits), Expect = 1.2e-106, Sum P(3) = 1.2e-106
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 757 ATNIPSRSRLNSREDQSTNTPSQTIVNGAENKAT--KTPTQMRLKSSENQVTSTPPR 811
A N P R + NS E + + S+ + E++A T + +N ++ TPPR
Sbjct: 343 ACNKPQRVKQNS-ESERRSPSSEDDRDERESRAEIQNTEEYNEIFQPKNSISRTPPR 398
Score = 47 (21.6 bits), Expect = 2.4e-106, Sum P(3) = 2.4e-106
Identities = 19/74 (25%), Positives = 29/74 (39%)
Query: 826 PIRRRFNR-----NVDQTT--NVTRHRRSISNTDQATSTTAHVAVKNNDDIATVITPHVT 878
P+RR + R N Q N RRS S+ D + ++N ++ + P
Sbjct: 332 PLRRIYERPSTACNKPQRVKQNSESERRSPSSEDDRDERESRAEIQNTEEYNEIFQPKN- 390
Query: 879 ALSYERTSTPKGEP 892
S RT + EP
Sbjct: 391 --SISRTPPRRSEP 402
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 858 (307.1 bits), Expect = 1.7e-103, Sum P(2) = 1.7e-103
Identities = 150/331 (45%), Positives = 230/331 (69%)
Query: 1 MAKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSP 60
+ K +KLQE VAH++NV+ + +GK + R L TGGDD +VNLW+I KP +MSL G +SP
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
V+SV ++ E L++AG+ +G I++WDLE +K++RTL GHK+N +++FHP+GEF ASG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
DTN+K+WDIR+KGC+ Y+GH++ + +RF+PDG+W+ S D+ VK+WDLTAGK++ +F
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 181 KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
H G + ++FHP E+LLA+GS+DRT++FWDLE F+++ E V ++ F+PDG
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCC 245
Query: 241 LFSGFDDNLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHV 300
L+SG D+L+VY WEP C D V + W + DL I + +L+G +F +++V +V D++ V
Sbjct: 246 LYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVVDLTRV 305
Query: 301 EPYGVGAPEPDQSICTEVKFNPPGSHSLEKV 331
G +P Q+ + P SL ++
Sbjct: 306 TRTGTVTQDPVQANQPLTQQTPNPGVSLRRI 336
Score = 187 (70.9 bits), Expect = 1.7e-103, Sum P(2) = 1.7e-103
Identities = 84/372 (22%), Positives = 143/372 (38%)
Query: 710 SNIAPYTRHDRNEDRATNITPQSKISRNQDQATNITSHMGLNSN---ENRATNI--PSRS 764
SN++ Y R +T Q + NQ T T + G++ E +T P R
Sbjct: 293 SNVSSYVVDLTRVTRTGTVT-QDPVQANQP-LTQQTPNPGVSLRRIYERPSTTCSKPQRV 350
Query: 765 RLNSREDQSTNTPSQTIVNGAENKAT--KTPTQMRLKSSENQVTSTPPRAR--LNSSIEG 820
+ NS E + + S+ + E++A + +N ++ TPPR + E
Sbjct: 351 KHNS-ESERRSPSSEDDRDERESRAEIQNAEDYNEIFQPKNSISRTPPRRSEPFPAPPED 409
Query: 821 QATNIPIRRRFNRNVD-QTTNVTRHRRSISNTDQATSTTAHVAVKNNDDIATVITPHVTA 879
A + + + +D Q + + ++T A K DI
Sbjct: 410 DAATVKEVSKPSPAMDVQLPQLPVPNLEVPARPSVMTSTP--APKGEPDIIPATRNEPIG 467
Query: 880 LSYERTSTPKGEPQISGRDTPVANEGEAVESLMETHDIFISTLRSRLTKLQVVRHFWERN 939
L PQ + +E +A+ + + HD L SR L VR W
Sbjct: 468 LKASDFLPAVKVPQ----QAELVDE-DAMSQIRKGHDTMFVVLTSRHKNLDTVRAVWTTG 522
Query: 940 DIKGGINALRKLPDHSVQADVMSVLMEKMEIXXXXXXXXXXXXXXXXXDSKMERHASISL 999
DIK +++ + D SV D+++++ +K + SK E +
Sbjct: 523 DIKTSVDSAVAINDLSVVVDLLNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGC 582
Query: 1000 EMLLKLVVVFGPMIHSTLSAPPAVGVDLHAEQRRECCNRCFMQLQKIQKILPILERRGGL 1059
L ++ F P+I L+APP+VGVD+ E+R C CF QL+ I ++ G
Sbjct: 583 TSLKLILQRFLPLITDILAAPPSVGVDISREERLHKCRLCFKQLKSISGLVKSKSGLSGR 642
Query: 1060 LAKCAHELNLVL 1071
EL+L++
Sbjct: 643 HGSAFRELHLLM 654
Score = 49 (22.3 bits), Expect = 6.3e-89, Sum P(2) = 6.3e-89
Identities = 33/155 (21%), Positives = 61/155 (39%)
Query: 586 PQTRLSRNEDQAADVTPQTTLSSNEDHVANVTSQTRL-NGNEYQAATAPQQTRLSSNIDP 644
P T S+ + + + S+ED S+ + N +Y P+ + +S P
Sbjct: 340 PSTTCSKPQRVKHNSESERRSPSSEDDRDERESRAEIQNAEDYNEIFQPKNS-ISRT--P 396
Query: 645 VANVTPQTLPSGNEDQAANVTPQTRPSSNEDQTANVIRQTRPSSNEDQAVIVNPQTRRHS 704
P P+ ED AA V ++PS D V P N + + T +
Sbjct: 397 PRRSEP--FPAPPEDDAATVKEVSKPSPAMD----VQLPQLPVPNLEVPARPSVMTSTPA 450
Query: 705 NEDQASNIAPYTRHDRNEDRATNITPQSKISRNQD 739
+ + +I P TR++ +A++ P K+ + +
Sbjct: 451 PKGEP-DIIPATRNEPIGLKASDFLPAVKVPQQAE 484
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 863 (308.9 bits), Expect = 2.2e-103, Sum P(2) = 2.2e-103
Identities = 194/535 (36%), Positives = 296/535 (55%)
Query: 1 MAKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSP 60
+ K +KLQE VAH++NV+ + +GK + R L TGGDD +VNLW+I KP +MSL G +SP
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
V+SV ++ E L++AG+ +G I++WDLE +K++RTL GHK+N +++FHP+GEF ASG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
DTN+K+WDIR+KGC+ Y+GH++ + +RF+PDG+W+ S D+ VK+WDLTAGK++ +F
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 181 KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
H G + ++FHP E+LLA+GS+DRT++FWDLE F+++ E V +I F+PDG
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCC 245
Query: 241 LFSGFDDNLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHV 300
L+SG D+L+VY WEP C D V + W + DL I + +L+G +F +++V +V D++ V
Sbjct: 246 LYSGCQDSLRVYGWEPERCFDVVLVHWGKVADLAICNNQLIGVAFSQSNVSSYVVDLTRV 305
Query: 301 EPYGVGAPEPDQSICTEVKFNPPGSHSLEKV------------GIIGRSTSGFRSTSPDY 348
G A +P Q + P S L ++ + S S RS S +
Sbjct: 306 TRTGTVARDPVQDSRPPTQQPPHPSAPLRRIYERPSTACSKPQRVKQNSESERRSPSSE- 364
Query: 349 ETKDIKTIYVDSTGGKPVASQKIGPLNSPKVVPPLDSEEISDLQTEKQNPAIGVPELSNG 408
+ +D + + + ++ P NS PP SE + + A
Sbjct: 365 DDRDERESRAEIQNAEDY-NEIFQPKNSISRTPPRRSEPFP--APPEDDMATAKEAAKPS 421
Query: 409 QALDKSFIVPSIVPQESPAGKDSSFSAGESITFSRTKPGMLLRPAHVQKPSNSKYDAERL 468
A D F VP+I P G AG SR P + PA +P+ +
Sbjct: 422 PATDAQFPVPNICP-----G-----GAGTLEVLSRP-PVVTSTPAPKAEPA--------I 462
Query: 469 STAAESESLNSKKSDLDSAVDPNVKTRFVSSDGARKSCEEKDCHIKTITGEIENI 523
A +E + K SD AV + V D + + D +T +N+
Sbjct: 463 FPATRNEPIGLKASDFLPAVKIPQQAELVDEDAMSQIRKGHDTMCVVLTSRHKNL 517
Score = 181 (68.8 bits), Expect = 2.2e-103, Sum P(2) = 2.2e-103
Identities = 44/166 (26%), Positives = 74/166 (44%)
Query: 906 EAVESLMETHDIFISTLRSRLTKLQVVRHFWERNDIKGGINALRKLPDHSVQADVMSVLM 965
+A+ + + HD L SR L VR W DIK +++ + D SV D+++++
Sbjct: 494 DAMSQIRKGHDTMCVVLTSRHKNLDTVRGVWTTGDIKTSVDSAVAINDLSVVVDLLNIVN 553
Query: 966 EKMEIXXXXXXXXXXXXXXXXXDSKMERHASISLEMLLKLVVVFGPMIHSTLSAPPAVGV 1025
+K + SK E + L ++ F P+I L+APP+VGV
Sbjct: 554 QKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAAPPSVGV 613
Query: 1026 DLHAEQRRECCNRCFMQLQKIQKILPILERRGGLLAKCAHELNLVL 1071
D+ E+R C C+ QL+ I ++ G EL+L++
Sbjct: 614 DISREERLHKCRLCYKQLKSISNLVKSKSGLSGRHGSAFRELHLLM 659
Score = 54 (24.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 29/125 (23%), Positives = 48/125 (38%)
Query: 788 KATKTPTQMR--LKSSENQVTSTP-PRARLNSSIEGQATNIPIRRRFNRNVDQTTNVTRH 844
+ T+T T R ++ S P P A L E +T +R +N +
Sbjct: 304 RVTRTGTVARDPVQDSRPPTQQPPHPSAPLRRIYERPSTACSKPQRVKQNSES------E 357
Query: 845 RRSISNTDQATSTTAHVAVKNNDDIATVITPHVTALSYERTSTPKGEPQISGRDTPVANE 904
RRS S+ D + ++N +D + P S RT + EP + + +A
Sbjct: 358 RRSPSSEDDRDERESRAEIQNAEDYNEIFQPKN---SISRTPPRRSEPFPAPPEDDMATA 414
Query: 905 GEAVE 909
EA +
Sbjct: 415 KEAAK 419
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 825 (295.5 bits), Expect = 8.4e-102, Sum P(2) = 8.4e-102
Identities = 140/299 (46%), Positives = 214/299 (71%)
Query: 6 YKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVA 65
+KLQE VAHS+NV+ + +GK + R L TGG+D +VN+WA+ KP +MSL G +S V +
Sbjct: 11 WKLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQ 70
Query: 66 FDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLK 125
F+S+E V+AG+ +G ++LWDLE +K++RTL GHK++ ++++FHP GE+ ASG +D+N+K
Sbjct: 71 FNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIK 130
Query: 126 IWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEG 185
+WD+R+KGC+ YKGHT+ + + F+PDG+W+ S D+ VK+WDL AGK++ +F H
Sbjct: 131 LWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTS 190
Query: 186 HIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF 245
+ + FHP E+LLA+GSADRTVK WDLE F +IGS+ E V ++ F+PDG L+SG
Sbjct: 191 AVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGS 250
Query: 246 DDNLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHVEPYG 304
++ L+VY WEP C D V +GW + DL I++ +++ S+ +V +V D++ V+ G
Sbjct: 251 ENTLRVYGWEPDRCFDVVHVGWGKVSDLAISNNQMIAVSYSHTNVSWYVVDLNRVKKSG 309
Score = 269 (99.8 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 69/248 (27%), Positives = 110/248 (44%)
Query: 82 IKLWDLEESKMVRTLTGHKSNCTAVEF-HPFGEFFASGCMDTNLKIWDIRKKGCIHTYKG 140
I W L+E + H SN +++ G A+G D + IW + K CI + G
Sbjct: 8 ITSWKLQE------IVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTG 61
Query: 141 HTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLA 200
HT + I+F VV+G +++WDL A K+L H+ I S+DFHP+ LA
Sbjct: 62 HTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLA 121
Query: 201 TGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVICH 260
+GS D +K WD+ + + V + F PDG+ L S DD+ V W+ +
Sbjct: 122 SGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDST-VKLWDLIAGK 180
Query: 261 DSVDMGWSTLGDLCIN---DGKLLGCSFYRNSVGIWVADVSHVEPYGVGAPEPDQSICTE 317
+ T + + LL +V +W + ++ +G+ E + +
Sbjct: 181 MITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNM----IGSSEGETGVVRS 236
Query: 318 VKFNPPGS 325
V FNP GS
Sbjct: 237 VLFNPDGS 244
Score = 204 (76.9 bits), Expect = 8.4e-102, Sum P(2) = 8.4e-102
Identities = 79/360 (21%), Positives = 147/360 (40%)
Query: 720 RNEDR-ATNITPQSKISRNQDQATNITSHMGLNSNENRATNIPSRSRLNSREDQSTNTPS 778
RN +R T+ T Q ++ + S+E+ + S + + + ED
Sbjct: 334 RNYERPTTSCTGQEMKQSSEADRRSPEGERRSPSSEDEKEDKESSAEITNPEDYKEIFQP 393
Query: 779 QTIVNGAENKATKT-PTQMRLKSSENQVTSTPPRARLNSSIEGQATNI--PIRRRFN-RN 834
+++++ K T+ P + SE+ + P ++ + + +A + PI +
Sbjct: 394 RSVISRTPPKTTEPFPAPLEHSFSESVLEKPGPVVKIVTPVIDRAGQLKGPITSSTPVQR 453
Query: 835 VDQTTNVTRHRRSISNTDQATSTTAHVAVKNNDDIATVITPHVTALSYERTSTPKGEPQI 894
V+ T R T A+S + V +T I + + E G+
Sbjct: 454 VEPTVIAAAPRPVAVVTTSASSPSRPVVNTTKPKPSTGI---ILSTRNEPIGLNAGDFLS 510
Query: 895 SGRDTPVANEG--EAVESLMETHDIFISTLRSRLTKLQVVRHFWERNDIKGGINALRKLP 952
R+ + G EA+ + + HD L SR L VR W D+K +++ +
Sbjct: 511 HARNAKASAMGDEEALAQIRKGHDTMCVMLSSRSKNLDSVRSVWASGDVKTSLDSAVSMN 570
Query: 953 DHSVQADVMSVLMEKMEIXXXXXXXXXXXXXXXXXDSKMERHASISLEMLLKLVVV-FGP 1011
D S+ DV++++ K + S+ E + M LKL++ F P
Sbjct: 571 DLSIVVDVLNIINLKPSLWKLDLCTSILPQIEELLQSRYESYVQTGC-MSLKLILKRFWP 629
Query: 1012 MIHSTLSAPPAVGVDLHAEQRRECCNRCFMQLQKIQKILPILERRGGLLAKCAHELNLVL 1071
+I TL+APP+VGVD+ E+R + C C+ QL+ + ++ + G EL L++
Sbjct: 630 LISDTLNAPPSVGVDITREERHQKCKACYKQLKNLSNVVKNRAEQVGRHGSTFRELQLLM 689
Score = 70 (29.7 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 22/87 (25%), Positives = 40/87 (45%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G + EF +H++ VN + L +G D+ V LW + K + S G + V SV
Sbjct: 179 GKMITEFTSHTSAVNVVQFHPNEY-LLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSV 237
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESK 91
F+ + +G S ++++ E +
Sbjct: 238 LFNPDGSCLYSG-SENTLRVYGWEPDR 263
Score = 55 (24.4 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 61/308 (19%), Positives = 117/308 (37%)
Query: 636 TRLSSNID-PVANVTPQTLPSGNEDQAANVTPQTRPSSNEDQTANVIRQTRPSSNEDQAV 694
T L N + P + T Q + +E + + R S+ED+ + ++ ED
Sbjct: 330 TTLRRNYERPTTSCTGQEMKQSSEADRRSPEGERRSPSSEDEKEDKESSAEITNPEDYKE 389
Query: 695 IVNPQTRRHSNEDQASNIAPYT-RHDRNEDRATNITPQSKISRNQ-DQATNITSHMGLNS 752
I P++ + + P H +E P KI D+A + + ++
Sbjct: 390 IFQPRSVISRTPPKTTEPFPAPLEHSFSESVLEKPGPVVKIVTPVIDRAGQLKGPITSST 449
Query: 753 NENRA--TNIPSRSRLNSREDQSTNTPSQTIVNGAENKATKTPTQMRLKSSENQVTSTPP 810
R T I + R + S ++PS+ +VN + K P+ + S+ N+
Sbjct: 450 PVQRVEPTVIAAAPRPVAVVTTSASSPSRPVVNTTKPK----PSTGIILSTRNEPIGLNA 505
Query: 811 RARLNSSIEGQATNIPIRRRFN--RNVDQTTNVTRHRRSISNTDQATSTTAHVAVKNNDD 868
L+ + +A+ + R T V RS N D S A VK + D
Sbjct: 506 GDFLSHARNAKASAMGDEEALAQIRKGHDTMCVMLSSRS-KNLDSVRSVWASGDVKTSLD 564
Query: 869 IATVITPHVTALSYERTSTPKGEPQISGRDTPVANEGEAVESLMETHDIFISTLRSRLTK 928
A ++ + ++ + + +P + D + + E L ++ ++ T L K
Sbjct: 565 SA--VSMNDLSIVVDVLNIINLKPSLWKLDLCTSILPQIEELLQSRYESYVQTGCMSL-K 621
Query: 929 LQVVRHFW 936
L +++ FW
Sbjct: 622 L-ILKRFW 628
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 849 (303.9 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 143/304 (47%), Positives = 215/304 (70%)
Query: 1 MAKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSP 60
+ K +KLQE VAHS+NV+ + +GK R L TGGDD +VN+W++ KP +MSL G ++P
Sbjct: 6 VTKTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTP 65
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
++S+ + E L++AG+ +G I++WDLE +K++RTL GHK+N +++FHP+G F ASG +
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
DT++K+WD+R+KGCI YK HT+ + +RF+PDG+W+ S D+ VK+WDLTAGK++ +F
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 185
Query: 181 KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
H G + ++FHP E+LLA+GS+DRT++FWDLE F ++ E T V I F+PDG
Sbjct: 186 TGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCC 245
Query: 241 LFSGFDDNLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHV 300
L+ GF D+L+VY WEP C D V + W + DL + +L+G SF +++V +V D+S V
Sbjct: 246 LYGGFQDSLRVYGWEPERCFDVVVVNWGKVADLSVCHNQLIGVSFAQSTVSSFVVDLSRV 305
Query: 301 EPYG 304
G
Sbjct: 306 TKSG 309
Score = 171 (65.3 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 74/350 (21%), Positives = 136/350 (38%)
Query: 730 PQSKISRNQDQATNITSHMGLNSNENR-ATNIPSRSRL-NSREDQSTNTPSQTIVNGAEN 787
P + N+ A + L + +R +T+ R+ +S E + + S+ + E+
Sbjct: 312 PHGLLRNNELLAQPTPTGSSLRRSYDRPSTSCSKPQRVKHSSESERRSPSSEEDRDEKES 371
Query: 788 KAT-KTPTQMR-LKSSENQVTSTPPRARLNSSIEGQATNIPIRRRFNRNVDQTTNVTRH- 844
KA + P + + N ++ TPP +N + PI + +Q V
Sbjct: 372 KAEIQNPEDYKEIFQPRNAISRTPPH--INEPFPAPPEDEPITAKEAVKPNQPVEVQTPL 429
Query: 845 -RRSISNTDQATSTTAHVAVKNNDDIATVITPHVTALSYERTSTPKGE--PQISGRDTPV 901
++ + T Q + + + +VI P A E + P + +
Sbjct: 430 PKQELPETFQRPPIASSTPMPRAEP--SVI-P---AARNEPIGLKASDFLPALKNQSQAE 483
Query: 902 ANEGEAVESLMETHDIFISTLRSRLTKLQVVRHFWERNDIKGGINALRKLPDHSVQADVM 961
+ E + + + H L SR L VR W +D+K ++A D SV D++
Sbjct: 484 LTDEEIMSQIRKGHKTVCMVLTSRHKNLDTVRAVWSTSDMKNSVDAAVATNDLSVVVDLL 543
Query: 962 SVLMEKMEIXXXXXXXXXXXXXXXXXDSKMERHASISLEMLLKLVVVFGPMIHSTLSAPP 1021
+++ + + SK E + L ++ F P+I L+APP
Sbjct: 544 NIVNQTASLWKLDLCTVVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAAPP 603
Query: 1022 AVGVDLHAEQRRECCNRCFMQLQKIQKILPILERRGGLLAKCAHELNLVL 1071
+VGVD+ E+R C C+ QL+ I I+ G EL+L++
Sbjct: 604 SVGVDITREERLHKCRLCYKQLKNISNIVKNKSGLSGRHGSAFRELHLLM 653
Score = 54 (24.1 bits), Expect = 1.7e-88, Sum P(2) = 1.7e-88
Identities = 45/200 (22%), Positives = 80/200 (40%)
Query: 635 QTRLSSNIDPVANVTPQ-TLPSG---NEDQAANVTPQTRPSSNEDQTANVIRQT--RPSS 688
Q+ +SS + ++ VT ++P G N + A TP T + +R++ RPS+
Sbjct: 292 QSTVSSFVVDLSRVTKSGSVPHGLLRNNELLAQPTP----------TGSSLRRSYDRPST 341
Query: 689 NEDQAVIVNPQTRRHSNEDQASNIAPYTRHDRNEDRATNITPQSKISRNQDQATNITSHM 748
+ + PQ +HS+E + + P + DR+E + + + Q N S
Sbjct: 342 SCSK-----PQRVKHSSESERRS--PSSEEDRDEKESKAEIQNPEDYKEIFQPRNAISRT 394
Query: 749 GLNSNENRATNIPSRSRLNSREDQSTNTPSQTIVNGAENKATKTPTQMRLKSSENQ-VTS 807
+ NE P + ++E N P + T P Q ++ + + S
Sbjct: 395 PPHINEPFPAP-PEDEPITAKEAVKPNQPVEV--------QTPLPKQELPETFQRPPIAS 445
Query: 808 TPPRARLNSSIEGQATNIPI 827
+ P R S+ A N PI
Sbjct: 446 STPMPRAEPSVIPAARNEPI 465
Score = 42 (19.8 bits), Expect = 3.1e-87, Sum P(2) = 3.1e-87
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 365 PVASQKIGPLNSPKVVPPLDSEEISDLQTEKQNPAI 400
P+AS P P V+P +E I L+ PA+
Sbjct: 442 PIASSTPMPRAEPSVIPAARNEPIG-LKASDFLPAL 476
Score = 40 (19.1 bits), Expect = 5.0e-87, Sum P(2) = 5.0e-87
Identities = 28/148 (18%), Positives = 52/148 (35%)
Query: 422 PQESPAGKDSSFSAGESITFSRTKPGMLLRPAHVQKP----SNSKYDAE-RLSTAAESES 476
P++ P + + + P L P Q+P S AE + AA +E
Sbjct: 406 PEDEPITAKEAVKPNQPVEVQTPLPKQEL-PETFQRPPIASSTPMPRAEPSVIPAARNEP 464
Query: 477 LNSKKSDLDSAVDPNVKTRFVSSDGARKSCEEKDCHIKTITGEIENIFSPQKPPKQEDGD 536
+ K SD A+ + + + + +T +N+ + + D
Sbjct: 465 IGLKASDFLPALKNQSQAELTDEEIMSQIRKGHKTVCMVLTSRHKNLDTVRAVWSTSDMK 524
Query: 537 KSRDCSKITNSVKFVNGVAVVPGRTRSL 564
S D + TN + V + + +T SL
Sbjct: 525 NSVDAAVATNDLSVVVDLLNIVNQTASL 552
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 830 (297.2 bits), Expect = 1.1e-97, Sum P(2) = 1.1e-97
Identities = 141/305 (46%), Positives = 214/305 (70%)
Query: 1 MAKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSP 60
+ K +KLQE VAHS+NV+ + +GK R L TGGDD +VN+W++ KP +MSL G ++P
Sbjct: 6 VTKTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTP 65
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
++S+ + E L++AG+ +G I++WDLE +K++RTL GHK+N +++FHP+G F ASG +
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
DT++K+WD+R+KGCI YK HT+ + +RF+PDG+W+ S D+ VK+WDLTAGK++ +F
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 185
Query: 181 KFHEGHIRSIDFHP-LEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGR 239
H G + ++FHP +E+LLA+GS+ T++FWDLE F ++ E T V I F+PDG
Sbjct: 186 TGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGC 245
Query: 240 TLFSGFDDNLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSH 299
L+ GF D+L+VY WEP C D V + W + DL + +L+G SF +++V +V D+S
Sbjct: 246 CLYGGFQDSLRVYGWEPERCFDVVVVNWGKVADLSVCHNQLIGVSFAQSTVSSFVVDLSR 305
Query: 300 VEPYG 304
V G
Sbjct: 306 VTKSG 310
Score = 160 (61.4 bits), Expect = 1.1e-97, Sum P(2) = 1.1e-97
Identities = 76/359 (21%), Positives = 131/359 (36%)
Query: 720 RNEDRATNITPQ-SKISRNQDQ-ATNITSHMGLNSNENRATNIPSRSRLNSREDQSTNTP 777
RN + TP S + R+ D+ +T+ + + + PS S ED+
Sbjct: 318 RNNELLAQPTPTGSSLRRSYDRPSTSCSKPQRVKHSSESERRSPS-----SEEDRDEKES 372
Query: 778 SQTIVNGAENKATKTPTQM--RLKSSENQVTSTPPRARLNSSIEGQATNIPIRRRFNRNV 835
I N + K P R N+ PP ++ E N P+ +
Sbjct: 373 KAEIQNPEDYKEIFQPRNAISRTPPHINEPFPAPPEDEPITAKEAVKPNQPVEVQTPLPK 432
Query: 836 DQTTNVTRHRRSISNTDQATSTTAHVAVKNNDDIATVITPHVTALSYERTSTPKGEPQIS 895
+ + S+T + + + N+ I + + AL K + Q
Sbjct: 433 QELPETFQRPPIASSTPMPRAEPSVIPAARNEPIGLKASDFLPAL--------KNQSQAE 484
Query: 896 GRDTPVANEGEAVESLMETHDIFISTLRSRLTKLQVVRHFWERNDIKGGINALRKLP--- 952
D E + + + H L SR L VR W +D+K +N++
Sbjct: 485 LTDE------EIMSQIRKGHKTVCMVLTSRHKNLDTVRAVWSTSDMKARMNSVDAAVATN 538
Query: 953 DHSVQADVMSVLMEKMEIXXXXXXXXXXXXXXXXXDSKMERHASISLEMLLKLVVVFGPM 1012
D SV D+++++ + + SK E + L ++ F P+
Sbjct: 539 DLSVVVDLLNIVNQTASLWKLDLCTVVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPL 598
Query: 1013 IHSTLSAPPAVGVDLHAEQRRECCNRCFMQLQKIQKILPILERRGGLLAKCAHELNLVL 1071
I L+APP+VGVD+ E+R C C+ QL+ I I+ G EL+L++
Sbjct: 599 ITDILAAPPSVGVDITREERLHKCRLCYKQLKNISNIVKNKSGLSGRHGSAFRELHLLM 657
Score = 54 (24.1 bits), Expect = 1.7e-86, Sum P(2) = 1.7e-86
Identities = 45/200 (22%), Positives = 80/200 (40%)
Query: 635 QTRLSSNIDPVANVTPQ-TLPSG---NEDQAANVTPQTRPSSNEDQTANVIRQT--RPSS 688
Q+ +SS + ++ VT ++P G N + A TP T + +R++ RPS+
Sbjct: 293 QSTVSSFVVDLSRVTKSGSVPHGLLRNNELLAQPTP----------TGSSLRRSYDRPST 342
Query: 689 NEDQAVIVNPQTRRHSNEDQASNIAPYTRHDRNEDRATNITPQSKISRNQDQATNITSHM 748
+ + PQ +HS+E + + P + DR+E + + + Q N S
Sbjct: 343 SCSK-----PQRVKHSSESERRS--PSSEEDRDEKESKAEIQNPEDYKEIFQPRNAISRT 395
Query: 749 GLNSNENRATNIPSRSRLNSREDQSTNTPSQTIVNGAENKATKTPTQMRLKSSENQ-VTS 807
+ NE P + ++E N P + T P Q ++ + + S
Sbjct: 396 PPHINEPFPAP-PEDEPITAKEAVKPNQPVEV--------QTPLPKQELPETFQRPPIAS 446
Query: 808 TPPRARLNSSIEGQATNIPI 827
+ P R S+ A N PI
Sbjct: 447 STPMPRAEPSVIPAARNEPI 466
Score = 42 (19.8 bits), Expect = 3.1e-85, Sum P(2) = 3.1e-85
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 365 PVASQKIGPLNSPKVVPPLDSEEISDLQTEKQNPAI 400
P+AS P P V+P +E I L+ PA+
Sbjct: 443 PIASSTPMPRAEPSVIPAARNEPIG-LKASDFLPAL 477
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 818 (293.0 bits), Expect = 1.4e-97, Sum P(2) = 1.4e-97
Identities = 139/304 (45%), Positives = 209/304 (68%)
Query: 1 MAKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSP 60
+ K +KLQE VAHS+NV+ + +GK R L TGGDD +VN+W++ KP +MSL G ++P
Sbjct: 6 VTKTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTP 65
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
++S+ + E L++AG+ +G I++WDLE +K++RTL GHK+N +++FHP+G F ASG +
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
DT++K+WD+R+KGCI YK HT+ + +RF+PDG+W+ S D+ VK+WDLTAGK++ +F
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 185
Query: 181 KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
H G + ++FHP E+ LA RT++FWDLE F ++ E T V I F+PDG
Sbjct: 186 TGHYGPVNVVEFHPSEYPLAGSPVHRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCC 245
Query: 241 LFSGFDDNLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHV 300
L+ GF D+L+VY WEP C D V + W + DL + +L+G SF +++V +V D+S V
Sbjct: 246 LYGGFQDSLRVYGWEPERCFDVVVVNWGKVADLSVCHNQLIGVSFAQSTVSSFVVDLSRV 305
Query: 301 EPYG 304
G
Sbjct: 306 TKSG 309
Score = 171 (65.3 bits), Expect = 1.4e-97, Sum P(2) = 1.4e-97
Identities = 80/358 (22%), Positives = 131/358 (36%)
Query: 720 RNEDRATNITPQ-SKISRNQDQATNITSHMGLNSNENRATNIPSRSRLNSREDQSTNTPS 778
RN + TP S + R+ D+ + TS S ++ RS +S ED+
Sbjct: 317 RNNELLAQPTPTGSSLRRSYDRPS--TSCSKPQSRVKHSSESERRSP-SSEEDRDEKESK 373
Query: 779 QTIVNGAENKATKTPTQM--RLKSSENQVTSTPPRARLNSSI---EGQATNIPIRRRFNR 833
I N + K P R N+ PP L I E N P+ +
Sbjct: 374 AEIQNPEDYKEIFQPRNAISRTPPHINEPFPAPPEDVLIEPITAKEAVKPNQPVEVQTPL 433
Query: 834 NVDQTTNVTRHRRSISNTDQATSTTAHVAVKNNDDIATVITPHVTALSYERTSTPKGEPQ 893
+ + S+T + + + N+ I + + AL K + Q
Sbjct: 434 PKQELPETFQRPPIASSTPMPRAEPSVIPAARNEPIGLKASDFLPAL--------KNQSQ 485
Query: 894 ISGRDTPVANEGEAVESLMETHDIFISTLRSRLTKLQVVRHFWERNDIKGGINALRKLPD 953
D E + + + H L SR L VR W +D+K ++A D
Sbjct: 486 AELTDE------EIMSQIRKGHKTVCMVLTSRHKNLDTVRAVWSTSDMKNSVDAAVATND 539
Query: 954 HSVQADVMSVLMEKMEIXXXXXXXXXXXXXXXXXDSKMERHASISLEMLLKLVVVFGPMI 1013
SV D+++++ + + SK E + L ++ F P+I
Sbjct: 540 LSVVVDLLNIVNQTASLWKLDLCTVVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLI 599
Query: 1014 HSTLSAPPAVGVDLHAEQRRECCNRCFMQLQKIQKILPILERRGGLLAKCAHELNLVL 1071
L+APP+VGVD+ E+R C C+ QL+ I I+ G EL+L++
Sbjct: 600 TDILAAPPSVGVDITREERLHKCRLCYKQLKNISNIVKNKSGLSGRHGSAFRELHLLM 657
Score = 42 (19.8 bits), Expect = 5.7e-84, Sum P(2) = 5.7e-84
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 365 PVASQKIGPLNSPKVVPPLDSEEISDLQTEKQNPAI 400
P+AS P P V+P +E I L+ PA+
Sbjct: 446 PIASSTPMPRAEPSVIPAARNEPIG-LKASDFLPAL 480
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 792 (283.9 bits), Expect = 1.1e-93, Sum P(2) = 1.1e-93
Identities = 137/305 (44%), Positives = 211/305 (69%)
Query: 1 MAKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSP 60
+ K +KLQE VAHS+NV+ + +GK R L TGGDD +VN+W++ + + L G ++P
Sbjct: 6 VTKTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVAQLRHDL-LTGHTTP 64
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
++S+ + E L++AG+ +G I++WDLE +K++RTL GHK+N +++FHP+G F ASG +
Sbjct: 65 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 124
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
DT++K+WD+R+KGCI YK HT+ + +RF+PDG+W+ S D+ VK+WDLTAGK++ +F
Sbjct: 125 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 184
Query: 181 KFHEGHIRSIDFHP-LEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGR 239
H G + ++FHP +E+LLA+GS+ T++FWDLE F ++ E T V I F+PDG
Sbjct: 185 TGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGC 244
Query: 240 TLFSGFDDNLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSH 299
L+ GF D+L+VY WEP C D V + W + DL + +L+G SF +++V +V D+S
Sbjct: 245 CLYGGFQDSLRVYGWEPERCFDVVVVNWGKVADLSVCHNQLIGVSFAQSTVSSFVVDLSR 304
Query: 300 VEPYG 304
V G
Sbjct: 305 VTKSG 309
Score = 160 (61.4 bits), Expect = 1.1e-93, Sum P(2) = 1.1e-93
Identities = 76/359 (21%), Positives = 131/359 (36%)
Query: 720 RNEDRATNITPQ-SKISRNQDQ-ATNITSHMGLNSNENRATNIPSRSRLNSREDQSTNTP 777
RN + TP S + R+ D+ +T+ + + + PS S ED+
Sbjct: 317 RNNELLAQPTPTGSSLRRSYDRPSTSCSKPQRVKHSSESERRSPS-----SEEDRDEKES 371
Query: 778 SQTIVNGAENKATKTPTQM--RLKSSENQVTSTPPRARLNSSIEGQATNIPIRRRFNRNV 835
I N + K P R N+ PP ++ E N P+ +
Sbjct: 372 KAEIQNPEDYKEIFQPRNAISRTPPHINEPFPAPPEDEPITAKEAVKPNQPVEVQTPLPK 431
Query: 836 DQTTNVTRHRRSISNTDQATSTTAHVAVKNNDDIATVITPHVTALSYERTSTPKGEPQIS 895
+ + S+T + + + N+ I + + AL K + Q
Sbjct: 432 QELPETFQRPPIASSTPMPRAEPSVIPAARNEPIGLKASDFLPAL--------KNQSQAE 483
Query: 896 GRDTPVANEGEAVESLMETHDIFISTLRSRLTKLQVVRHFWERNDIKGGINALRKLP--- 952
D E + + + H L SR L VR W +D+K +N++
Sbjct: 484 LTDE------EIMSQIRKGHKTVCMVLTSRHKNLDTVRAVWSTSDMKARMNSVDAAVATN 537
Query: 953 DHSVQADVMSVLMEKMEIXXXXXXXXXXXXXXXXXDSKMERHASISLEMLLKLVVVFGPM 1012
D SV D+++++ + + SK E + L ++ F P+
Sbjct: 538 DLSVVVDLLNIVNQTASLWKLDLCTVVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPL 597
Query: 1013 IHSTLSAPPAVGVDLHAEQRRECCNRCFMQLQKIQKILPILERRGGLLAKCAHELNLVL 1071
I L+APP+VGVD+ E+R C C+ QL+ I I+ G EL+L++
Sbjct: 598 ITDILAAPPSVGVDITREERLHKCRLCYKQLKNISNIVKNKSGLSGRHGSAFRELHLLM 656
Score = 54 (24.1 bits), Expect = 1.7e-82, Sum P(2) = 1.7e-82
Identities = 45/200 (22%), Positives = 80/200 (40%)
Query: 635 QTRLSSNIDPVANVTPQ-TLPSG---NEDQAANVTPQTRPSSNEDQTANVIRQT--RPSS 688
Q+ +SS + ++ VT ++P G N + A TP T + +R++ RPS+
Sbjct: 292 QSTVSSFVVDLSRVTKSGSVPHGLLRNNELLAQPTP----------TGSSLRRSYDRPST 341
Query: 689 NEDQAVIVNPQTRRHSNEDQASNIAPYTRHDRNEDRATNITPQSKISRNQDQATNITSHM 748
+ + PQ +HS+E + + P + DR+E + + + Q N S
Sbjct: 342 SCSK-----PQRVKHSSESERRS--PSSEEDRDEKESKAEIQNPEDYKEIFQPRNAISRT 394
Query: 749 GLNSNENRATNIPSRSRLNSREDQSTNTPSQTIVNGAENKATKTPTQMRLKSSENQ-VTS 807
+ NE P + ++E N P + T P Q ++ + + S
Sbjct: 395 PPHINEPFPAP-PEDEPITAKEAVKPNQPVEV--------QTPLPKQELPETFQRPPIAS 445
Query: 808 TPPRARLNSSIEGQATNIPI 827
+ P R S+ A N PI
Sbjct: 446 STPMPRAEPSVIPAARNEPI 465
Score = 42 (19.8 bits), Expect = 3.2e-81, Sum P(2) = 3.2e-81
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 365 PVASQKIGPLNSPKVVPPLDSEEISDLQTEKQNPAI 400
P+AS P P V+P +E I L+ PA+
Sbjct: 442 PIASSTPMPRAEPSVIPAARNEPIG-LKASDFLPAL 476
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 693 (249.0 bits), Expect = 1.5e-70, Sum P(2) = 1.5e-70
Identities = 115/225 (51%), Positives = 172/225 (76%)
Query: 1 MAKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSP 60
+ K +KLQE VAH++NV+ + +GK + R L TGGDD +VNLW+I KP +MSL G +SP
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
V+SV ++ E L++AG+ +G I++WDLE +K++RTL GHK+N +++FHP+GEF ASG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
DTN+K+WDIR+KGC+ Y+GH++ + +RF+PDG+W+ S D+ VK+WDLTAGK++ +F
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 181 KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPE 225
H G + ++FHP E+LLA+GS+DRT++FWDLE F+++ E
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGE 230
Score = 318 (117.0 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 81/319 (25%), Positives = 142/319 (44%)
Query: 8 LQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFD 67
+ H++ V + + ++ G + +W + L +L G + + S+ F
Sbjct: 56 IMSLTGHTSPVESVRLNTPE-ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFH 114
Query: 68 SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIW 127
V +G+ IKLWD+ V GH + F P G++ AS D +K+W
Sbjct: 115 PYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Query: 128 DIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHI 187
D+ + + GHT +N + F P+ + SG D ++ WDL +++ + G +
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPV 234
Query: 188 RS-----IDFHPLEFLLA-------TGSADRTVK-FWDLET-FELIGSTRPEVTGVHAIT 233
R + P ++ + S R+ F L T F P ++
Sbjct: 235 RYAGSWVVGLSPPPKVVGCRYGAGVSRSHHRSCSLFPGLPTAFPDFLRPTPHSRLPRSVL 294
Query: 234 FHPDGRTLFSGFDDNLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIW 293
F+PDG L+SG D+L+VY WEP C D V + W + DL + + +L+G +F +++V +
Sbjct: 295 FNPDGCCLYSGCQDSLRVYGWEPERCFDVVLVSWGKVADLAVCNDQLIGVAFSQSNVSSY 354
Query: 294 VADVSHVEPYGVGAPEPDQ 312
V D++ V G A +P Q
Sbjct: 355 VVDLTRVTRTGTVAQDPVQ 373
Score = 252 (93.8 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 60/207 (28%), Positives = 99/207 (47%)
Query: 51 LMSLCGLSSPVDSVAFDSAEVLVLA-GASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFH 109
L + +S V S+ A +LA G + LW + + + +LTGH S +V +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 110 PFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVW 169
E +G ++++WD+ + T GH I ++ F P G +V SG D +K+W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 170 DLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTG- 228
D+ + ++ H +R + F P LA+ + D TVK WDL +++ S P TG
Sbjct: 133 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM-SEFPGHTGP 191
Query: 229 VHAITFHPDGRTLFSGFDDNLKVYSWE 255
V+ + FHP+ L SG D + W+
Sbjct: 192 VNVVEFHPNEYLLASGSSDRT-IRFWD 217
Score = 250 (93.1 bits), Expect = 9.2e-18, Sum P(2) = 9.2e-18
Identities = 54/172 (31%), Positives = 83/172 (48%)
Query: 85 WDLEESKMVRTLTGHKSNCTAVEF-HPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTR 143
W L+E + H SN +++ G A+G D + +W I K CI + GHT
Sbjct: 11 WKLQE------IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGS 203
+ ++R +V+G ++VWDL A K+L H+ +I S+DFHP +A+GS
Sbjct: 65 PVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGS 124
Query: 204 ADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
D +K WD+ + R V + F PDG+ L S DD+ V W+
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHT-VKLWD 175
Score = 50 (22.7 bits), Expect = 1.5e-70, Sum P(2) = 1.5e-70
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 757 ATNIPSRSRLNSREDQSTNTPSQTIVNGAENKAT--KTPTQMRLKSSENQVTSTPPR 811
A N P R + NS E + + S+ + E++A T + +N ++ TPPR
Sbjct: 399 ACNKPQRVKQNS-ESERRSPSSEDDRDERESRAEIQNTEEYNEIFQPKNSISRTPPR 454
Score = 47 (21.6 bits), Expect = 3.1e-70, Sum P(2) = 3.1e-70
Identities = 19/74 (25%), Positives = 29/74 (39%)
Query: 826 PIRRRFNR-----NVDQTT--NVTRHRRSISNTDQATSTTAHVAVKNNDDIATVITPHVT 878
P+RR + R N Q N RRS S+ D + ++N ++ + P
Sbjct: 388 PLRRIYERPSTACNKPQRVKQNSESERRSPSSEDDRDERESRAEIQNTEEYNEIFQPKN- 446
Query: 879 ALSYERTSTPKGEP 892
S RT + EP
Sbjct: 447 --SISRTPPRRSEP 458
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 634 (228.2 bits), Expect = 2.9e-61, P = 2.9e-61
Identities = 106/205 (51%), Positives = 158/205 (77%)
Query: 1 MAKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSP 60
+ K +KLQE VAH++NV+ + +GK + R L TGGDD +VNLW+I KP +MSL G +SP
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
V+SV ++ E L++AG+ +G I++WDLE +K++RTL GHK+N +++FHP+GEF ASG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
DTN+K+WDIR+KGC+ Y+GH++ + +RF+PDG+W+ S D+ VK+WDLTAGK++ +F
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 181 KFHEGHIRSIDFHPLEFLLATGSAD 205
H G + ++FHP E+LLA+GS+D
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 250 (93.1 bits), Expect = 5.1e-20, P = 5.1e-20
Identities = 54/172 (31%), Positives = 83/172 (48%)
Query: 85 WDLEESKMVRTLTGHKSNCTAVEF-HPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTR 143
W L+E + H SN +++ G A+G D + +W I K CI + GHT
Sbjct: 11 WKLQE------IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGS 203
+ ++R +V+G ++VWDL A K+L H+ +I S+DFHP +A+GS
Sbjct: 65 PVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGS 124
Query: 204 ADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
D +K WD+ + R V + F PDG+ L S DD+ V W+
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHT-VKLWD 175
Score = 250 (93.1 bits), Expect = 5.1e-20, P = 5.1e-20
Identities = 59/199 (29%), Positives = 96/199 (48%)
Query: 51 LMSLCGLSSPVDSVAFDSAEVLVLA-GASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFH 109
L + +S V S+ A +LA G + LW + + + +LTGH S +V +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 110 PFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVW 169
E +G ++++WD+ + T GH I ++ F P G +V SG D +K+W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 170 DLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTG- 228
D+ + ++ H +R + F P LA+ + D TVK WDL +++ S P TG
Sbjct: 133 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM-SEFPGHTGP 191
Query: 229 VHAITFHPDGRTLFSGFDD 247
V+ + FHP+ L SG D
Sbjct: 192 VNVVEFHPNEYLLASGSSD 210
>UNIPROTKB|F1RF38 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0031117 "positive regulation of microtubule depolymerization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0008352
"katanin complex" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
GO:GO:0008352 PANTHER:PTHR19845 OMA:NAISRTP GO:GO:0031117
EMBL:CU467555 Ensembl:ENSSSCT00000003113 Uniprot:F1RF38
Length = 521
Score = 431 (156.8 bits), Expect = 1.1e-57, Sum P(3) = 1.1e-57
Identities = 74/174 (42%), Positives = 117/174 (67%)
Query: 139 KGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFL 198
+GH++ + +RF+PDG+W+ S D+ VK+WDLTAGK++ +F H G + ++FHP E+L
Sbjct: 1 QGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 60
Query: 199 LATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVI 258
LA+GS+DRT++FWDLE F+++ E V ++ F+PDG L+SG D+L+VY WEP
Sbjct: 61 LASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPER 120
Query: 259 CHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHVEPYGVGAPEPDQ 312
C D V + W + DL I + +L+G +F +++V +V D++ V G A +P Q
Sbjct: 121 CFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVVDLTRVTRTGTVAQDPVQ 174
Score = 168 (64.2 bits), Expect = 1.1e-57, Sum P(3) = 1.1e-57
Identities = 43/166 (25%), Positives = 72/166 (43%)
Query: 906 EAVESLMETHDIFISTLRSRLTKLQVVRHFWERNDIKGGINALRKLPDHSVQADVMSVLM 965
+A+ + + HD L SR L V W DIK +++ + D SV D+++++
Sbjct: 352 DAMSQIRKGHDTMCVVLTSRHKNLDTVWAAWTTGDIKTSVDSAVAINDLSVVVDLLNIVN 411
Query: 966 EKMEIXXXXXXXXXXXXXXXXXDSKMERHASISLEMLLKLVVVFGPMIHSTLSAPPAVGV 1025
+K + SK E + L ++ F P+I L+APP+VGV
Sbjct: 412 QKASLWKLDLCTTILPQIEKLLKSKYESYVQTGCTSLKLILKRFLPLITDMLAAPPSVGV 471
Query: 1026 DLHAEQRRECCNRCFMQLQKIQKILPILERRGGLLAKCAHELNLVL 1071
D+ E+R C C+ QL+ I + G EL+L++
Sbjct: 472 DISREERLHKCRLCYKQLKSISGFVKSKSSLSGRHGSAFRELHLLM 517
Score = 160 (61.4 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 35/124 (28%), Positives = 61/124 (49%)
Query: 98 GHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWV 157
GH + F P G++ AS D +K+WD+ + + GHT +N + F P+ +
Sbjct: 2 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 61
Query: 158 VSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRT-VKFWDLET- 215
SG D ++ WDL +++ + G +RS+ F+P L +G D V W+ E
Sbjct: 62 ASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPERC 121
Query: 216 FELI 219
F+++
Sbjct: 122 FDVV 125
Score = 159 (61.0 bits), Expect = 1.9e-21, Sum P(3) = 1.9e-21
Identities = 36/116 (31%), Positives = 53/116 (45%)
Query: 56 GLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFF 115
G S V + F + + A +KLWDL KM+ GH VEFHP
Sbjct: 2 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 61
Query: 116 ASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNV-VKVWD 170
ASG D ++ WD+ K + +G + ++ F PDG + SG D++ V W+
Sbjct: 62 ASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 117
Score = 155 (59.6 bits), Expect = 5.0e-21, Sum P(3) = 5.0e-21
Identities = 36/121 (29%), Positives = 59/121 (48%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
HS V C+ ++L + DD V LW + + G + PV+ V F E L+
Sbjct: 3 HSQAVRCLRFSPDG-KWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 61
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
+G+S I+ WDLE+ ++V + G +V F+P G SGC D+ L+++ +
Sbjct: 62 ASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDS-LRVYGWEPER 120
Query: 134 C 134
C
Sbjct: 121 C 121
Score = 56 (24.8 bits), Expect = 1.1e-57, Sum P(3) = 1.1e-57
Identities = 31/138 (22%), Positives = 51/138 (36%)
Query: 773 STNTPSQTIVNGAENKATKTPTQMRLKSSENQVTSTP-PRARLNSSIEGQATNIPIRRRF 831
S + S +V+ T T Q ++ S P P A L E +T +R
Sbjct: 148 SQSNVSSYVVDLTRVTRTGTVAQDPVQDSRPLAQQPPHPSAPLRRIYERPSTACSKPQRV 207
Query: 832 NRNVDQTTNVTRHRRSISNTDQATSTTAHVAVKNNDDIATVITPHVTALSYERTSTPKGE 891
+N + RRS S+ D + ++N +D + P S RT + E
Sbjct: 208 KQNSES------ERRSPSSEDDRDERESRAEIQNTEDYNEIFQPKN---SISRTPPRRSE 258
Query: 892 PQISGRDTPVANEGEAVE 909
P + + +A EA +
Sbjct: 259 PFPAPPEDDMATAKEAAK 276
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 594 (214.2 bits), Expect = 6.3e-57, P = 6.3e-57
Identities = 98/192 (51%), Positives = 148/192 (77%)
Query: 8 LQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFD 67
++E VAH++NV+ + +GK + R L TGGDD +VNLW+I KP +MSL G +SPV+SV +
Sbjct: 17 VEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 76
Query: 68 SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIW 127
+ E L++AG+ +G I++WDLE +K++RTL GHK+N +++FHP+GEF ASG DTN+K+W
Sbjct: 77 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 136
Query: 128 DIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHI 187
DIR+KGC+ Y+GH++ + +RF+PDG+W+ S D+ VK+WDLTAGK++ +F H G +
Sbjct: 137 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV 196
Query: 188 RSIDFHPLEFLL 199
++FHP E+LL
Sbjct: 197 NVVEFHPNEYLL 208
Score = 251 (93.4 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 52/164 (31%), Positives = 80/164 (48%)
Query: 93 VRTLTGHKSNCTAVEF-HPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFT 151
V + H SN +++ G A+G D + +W I K CI + GHT + ++R
Sbjct: 17 VEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 76
Query: 152 PDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFW 211
+V+G ++VWDL A K+L H+ +I S+DFHP +A+GS D +K W
Sbjct: 77 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 136
Query: 212 DLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
D+ + R V + F PDG+ L S DD+ V W+
Sbjct: 137 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHT-VKLWD 179
Score = 238 (88.8 bits), Expect = 9.8e-19, P = 9.8e-19
Identities = 55/190 (28%), Positives = 93/190 (48%)
Query: 50 ALMSLCGLSSPVDSVAFDSAEVLVLA-GASTGVIKLWDLEESKMVRTLTGHKSNCTAVEF 108
A+ + +S V S+ A +LA G + LW + + + +LTGH S +V
Sbjct: 16 AVEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 75
Query: 109 HPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKV 168
+ E +G ++++WD+ + T GH I ++ F P G +V SG D +K+
Sbjct: 76 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 135
Query: 169 WDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTG 228
WD+ + ++ H +R + F P LA+ + D TVK WDL +++ S P TG
Sbjct: 136 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM-SEFPGHTG 194
Query: 229 -VHAITFHPD 237
V+ + FHP+
Sbjct: 195 PVNVVEFHPN 204
>FB|FBgn0040207 [details] [associations]
symbol:kat80 "katanin 80" species:7227 "Drosophila
melanogaster" [GO:0008352 "katanin complex" evidence=ISS;NAS]
[GO:0051013 "microtubule severing" evidence=ISS;NAS] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0008017 "microtubule
binding" evidence=IEA;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008017 GO:GO:0051013 HSSP:P16649
GO:GO:0008352 PANTHER:PTHR19845 FlyBase:FBgn0040207 EMBL:AF223065
ProteinModelPortal:Q9NHF0 PRIDE:Q9NHF0 InParanoid:Q9NHF0
ArrayExpress:Q9NHF0 Bgee:Q9NHF0 Uniprot:Q9NHF0
Length = 823
Score = 511 (184.9 bits), Expect = 2.6e-52, Sum P(2) = 2.6e-52
Identities = 104/302 (34%), Positives = 161/302 (53%)
Query: 7 KLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAF 66
K+ + AH + V + +G+ R L+TGG+D+ VNLWAIG+ MSL G + +D V F
Sbjct: 10 KIYDIKAHDSRVTSLDLGETG-RVLVTGGEDRNVNLWAIGQNECFMSLTGHNRSIDCVRF 68
Query: 67 DSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKI 126
+ V + G+I+ WDL K+ TL GH + ++F+P GE+ SG DT +++
Sbjct: 69 AYKDNFVYSADDIGIIRRWDLNSQKIYSTLNGHMKSGRTLDFNPSGEYVVSGSNDTTVRL 128
Query: 127 WDIRKKG-CIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEG 185
WD++ + CI +GH +N+++F+PDG W+ S G + + +WD+ K + +F
Sbjct: 129 WDVQNENNCIKVCRGHMSHVNSVKFSPDGLWIASAGLEGSILIWDIRKSKQIMEFIADPP 188
Query: 186 --HIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEV-TGVHAITFHPDGRTLF 242
I + FHP EFLLA G D TV +DLE +L+ T + ITF +G LF
Sbjct: 189 VTAITCVQFHPFEFLLAAGRVDGTVSIYDLEHQQLVSQTTHFYGQAIRCITFSDNGECLF 248
Query: 243 SGFDDNLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLL-GCSFYRNSVGIWVADVSHVE 301
G + V WEP D + WS L D+ + + KL+ GC ++V I + V
Sbjct: 249 VGSSSGISVIGWEPDRELDHIKSTWSFLADMKVVNNKLICGCHEI-DTVSINTISLDRVI 307
Query: 302 PY 303
P+
Sbjct: 308 PF 309
Score = 108 (43.1 bits), Expect = 2.6e-52, Sum P(2) = 2.6e-52
Identities = 66/338 (19%), Positives = 129/338 (38%)
Query: 737 NQDQATNITSHMGLNSNENRATNIPSRSRLNSREDQSTNTPSQTIVNGAENK---ATKTP 793
N + A + + LN N +P R R +S + N A +T
Sbjct: 493 NYEMAEDFPVNQNLNYITNNYKPVPQPPRSTPRPSRSRRPLPPPLHKRTTNNMAGAKQTS 552
Query: 794 TQMRLKSSENQVTSTPPRARLNSSIEGQATNIPIRRRFNRNVDQTTNVTRHRRSISNTDQ 853
T + S +QV+S + + N+ +++ + NV V +++R + +
Sbjct: 553 TGIFGGSKLSQVSSVS-----SMELHKLDDNMVLKKSSSSNV-----VNKNKRPMGSAQS 602
Query: 854 ATSTTAHVAVKNNDDIATVITPHV---TALSYERTSTPKGEPQISGRDTPVAN----EGE 906
S + + N ++ + P + T L + K + + + P+ N +
Sbjct: 603 QFSKENNQ--QKNINVEIITKPPMRSRTTLDMRTSHQAKTQEKQIHQQQPMNNRIIMDDH 660
Query: 907 AVESLMETHDIFISTLRSRLTKLQVVRHFWERNDIKGGINALRKLPDHSVQADVMSVLME 966
+ L +H+ + L +R + L ++RH +D+ G + R S+ D++ ++E
Sbjct: 661 DFDMLSRSHEAVLQELSNRQSSLDLLRHATRSHDVLGALRQARSC-GKSIFIDLLGAILE 719
Query: 967 KMEIXXXXXXXXXXXXXXXXXDSKMERHASISLEMLLKLVVVFGPMIHSTLS--APPAVG 1024
K S+ + H + + + L ++ F P I L A +G
Sbjct: 720 KPSSWNLDFCMFVLPEIYELLQSQHKFHFTRACDTLRIILSNFLPTIQENLDSWAANGLG 779
Query: 1025 VDLHAEQRRECCNRCFMQLQKIQKILPILERRGGLLAK 1062
VD+ E R+ C C L +I K LP G L++
Sbjct: 780 VDVTREDRQRKCAECQRWLLQI-KNLPESTHFGSTLSQ 816
Score = 43 (20.2 bits), Expect = 1.8e-45, Sum P(2) = 1.8e-45
Identities = 20/102 (19%), Positives = 39/102 (38%)
Query: 608 SNEDHVANVTSQT--RLNGNEYQAATAPQQTRLSSNIDPVANVTPQTLPSGNEDQAANVT 665
S V++V+S +L+ N ++ ++ N P+ + Q N+ + NV
Sbjct: 559 SKLSQVSSVSSMELHKLDDNMVLKKSSSSNV-VNKNKRPMGSAQSQFSKENNQQKNINVE 617
Query: 666 PQTRPSSNEDQTANVIRQTRPSSNEDQAVIVNPQTRRHSNED 707
T+P T ++ + + E Q P R +D
Sbjct: 618 IITKPPMRSRTTLDMRTSHQAKTQEKQIHQQQPMNNRIIMDD 659
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 389 (142.0 bits), Expect = 5.9e-32, P = 5.9e-32
Identities = 110/394 (27%), Positives = 187/394 (47%)
Query: 7 KLQEFV-AHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVA 65
+LQ+ + +HS +V ++ + L + D + +W SL G S V SVA
Sbjct: 867 ELQQTLDSHSQSVRSVAFSPDG-KLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVA 925
Query: 66 FDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLK 125
F + +G+ +KLW+ ++++TL GH + +V F P G+ AS DT +K
Sbjct: 926 FSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIK 985
Query: 126 IWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEG 185
+W+ T+KGH I + F+PDG+ +VSG DN +K+WDL +L + H
Sbjct: 986 LWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSR 1045
Query: 186 HIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG- 244
+ ++ F P + LA+ S D T+K WD T EL + GV ++TF PDG+ L S
Sbjct: 1046 SVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNS 1105
Query: 245 FDDNLKVYSWEPVICHDSVDM-GWSTLGD-LCIN-DGKLLGCSFYRNSVGIWVADVSHVE 301
+D +K+ W P+ + G S D + + DGK L +Y +++ +W + +
Sbjct: 1106 YDGTIKL--WNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELL 1163
Query: 302 PYGVGAPEPDQSICTEVKFNPPG----SHSLEKVGIIGRSTSGFRSTSPDYETKDIKTIY 357
G + QS+ F+P G S S ++ + +G + +K ++++
Sbjct: 1164 QTLEGHSDRIQSVV----FSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVA 1219
Query: 358 VDSTGGKPVASQKIGPLNSPKVVPPLDSEEISDL 391
S GK +AS G + K+ P+ E + L
Sbjct: 1220 F-SPDGKLLASSSYG--ETIKLWDPVTGELLQTL 1250
Score = 348 (127.6 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 91/323 (28%), Positives = 156/323 (48%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G LQ HS V ++ + L +G D ++LW L + G + SV
Sbjct: 782 GELLQTLDGHSGTVESLAFSPDG-KLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSV 840
Query: 65 AFDSAEVLVLAGAST-GVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN 123
AF + + LA AS IK+WDL ++ +TL H + +V F P G+ AS +D+
Sbjct: 841 AF-APDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDST 899
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
+K+W+ + +G + + ++ F+PDG+ + SG N VK+W+ G+LL + H
Sbjct: 900 IKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGH 959
Query: 184 EGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS 243
+RS+ F P LA+ S+D T+K W+ T EL + + + A+ F PDG+ L S
Sbjct: 960 SQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVS 1019
Query: 244 GFDDN-LKVYSWEPVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWVADVSHVE 301
G DDN +K++ S++ ++ + + D K L S +++ +W + ++
Sbjct: 1020 GSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQ 1079
Query: 302 PYGVGAPEPDQSICTEVKFNPPG 324
G + +S V F+P G
Sbjct: 1080 RTLEGHSQGVRS----VTFSPDG 1098
Score = 346 (126.9 bits), Expect = 2.5e-27, P = 2.5e-27
Identities = 81/270 (30%), Positives = 131/270 (48%)
Query: 60 PVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGC 119
PV+SV F +++G+ +K+WD ++++TL GH ++ F P G+ ASG
Sbjct: 752 PVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGS 811
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
D + +WD + T++GH I ++ F PDG+ + S D+ +K+WDL G+L
Sbjct: 812 YDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQT 871
Query: 180 FKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGR 239
H +RS+ F P LLA+ S D T+K W+ T EL S V ++ F PDG+
Sbjct: 872 LDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGK 931
Query: 240 TLFSGFDDNLKVYSWEPVICH--DSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWVAD 296
L SG + N V W P +++ ++ + + DGK L S ++ +W +
Sbjct: 932 KLASGSEKNT-VKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNST 990
Query: 297 VSHVEPYGVGAPEPDQSICTEVKFNPPGSH 326
++ G D I V F+P G H
Sbjct: 991 TGELQQTFKGH---DLWI-RAVAFSPDGKH 1016
Score = 338 (124.0 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 106/410 (25%), Positives = 185/410 (45%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L++G D V +W L +L G S V+S+AF L+ +G+ I LWD
Sbjct: 765 LVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATG 824
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
++++T GH + +V F P G+ AS D+ +KIWD+ T H++ + ++ F
Sbjct: 825 ELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAF 884
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
+PDG+ + S D+ +KVW+ G+L + G ++S+ F P LA+GS TVK
Sbjct: 885 SPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKL 944
Query: 211 WDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVICHDSVDMGWSTL 270
W+ T EL+ + V ++ F PDG+ L S D + W + ++ +
Sbjct: 945 WNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTT-IKLWNST----TGELQQTFK 999
Query: 271 G-DLCIN------DGKLLGCSFYRNSVGIWVADVSHVEPYGVGAPEPDQSICTEVKFNPP 323
G DL I DGK L N++ +W S ++ + +S+ V F+P
Sbjct: 1000 GHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQ---SLEDHSRSVHA-VAFSPD 1055
Query: 324 ----GSHSLEKVGIIGRSTSGFRSTSPDYETKDIKTIYVDSTGGKPVASQKIGPLNSPKV 379
S SL+ + S +G + + ++ ++++ S GK +AS + K+
Sbjct: 1056 DKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTF-SPDGKLLASNSYD--GTIKL 1112
Query: 380 VPPLDSEEISDLQTEKQNPAIGVPELSNGQALDKSFIVPSIVPQESPAGK 429
PL E + T + + V +G+ L + +I +S G+
Sbjct: 1113 WNPLTGE-LQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGE 1161
Score = 329 (120.9 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 78/248 (31%), Positives = 121/248 (48%)
Query: 9 QEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDS 68
Q HS +V+ ++ + L + D + LW +L G S V SV F
Sbjct: 1038 QSLEDHSRSVHAVAFSPDD-KQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSP 1096
Query: 69 AEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWD 128
L+ + + G IKLW+ ++ +TLTG +V F P G+ ASG D+ +K+WD
Sbjct: 1097 DGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWD 1156
Query: 129 IRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIR 188
+ T +GH+ I ++ F+PDG+ + SG +D K+WD G+LL F+ H +
Sbjct: 1157 SATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVE 1216
Query: 189 SIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN 248
S+ F P LLA+ S T+K WD T EL+ + ++ F PDG L S +
Sbjct: 1217 SVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFD 1276
Query: 249 LKVYSWEP 256
K+ W+P
Sbjct: 1277 TKI--WDP 1282
Score = 299 (110.3 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 73/219 (33%), Positives = 108/219 (49%)
Query: 81 VIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKG 140
V + W E+ +TL H +V F P G+ SG D +KIWD + T G
Sbjct: 735 VEQTWSAEQ----QTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDG 790
Query: 141 HTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLA 200
H+ + ++ F+PDG+ + SG +DN + +WD G+LL F+ H I S+ F P LA
Sbjct: 791 HSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELA 850
Query: 201 TGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEPVI- 258
+ S D T+K WDL T EL + V ++ F PDG+ L S D +KV W P
Sbjct: 851 SASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKV--WNPATG 908
Query: 259 -CHDSVD--MGWSTLGDLCIN-DGKLLGCSFYRNSVGIW 293
S++ GW + + + DGK L +N+V +W
Sbjct: 909 ELQQSLEGRSGW--VKSVAFSPDGKKLASGSEKNTVKLW 945
Score = 179 (68.1 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 45/154 (29%), Positives = 67/154 (43%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L +G D + LW L +L G S + SV F L+ +G+ KLWD
Sbjct: 1143 LASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATG 1202
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
++++ GH +V F P G+ AS +K+WD + T ++ F
Sbjct: 1203 ELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAF 1262
Query: 151 TPDGRWVVSGG-FDNVVKVWDLTAGKLLHDFKFH 183
+PDG + S FD K+WD G+LL K H
Sbjct: 1263 SPDGNRLASVDIFDT--KIWDPATGELLQALKGH 1294
Score = 145 (56.1 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 46/143 (32%), Positives = 64/143 (44%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G LQ HS + + + L +G DQ LW L G S V+SV
Sbjct: 1160 GELLQTLEGHSDRIQSVVFSPDG-KLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESV 1218
Query: 65 AFDSAEVLVLAGASTG-VIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFAS-GCMDT 122
AF S + +LA +S G IKLWD ++++TL + +V F P G AS DT
Sbjct: 1219 AF-SPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFDT 1277
Query: 123 NLKIWDIRKKGCIHTYKGHTRGI 145
KIWD + KGH++ +
Sbjct: 1278 --KIWDPATGELLQALKGHSKWV 1298
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 332 (121.9 bits), Expect = 8.8e-29, P = 8.8e-29
Identities = 81/255 (31%), Positives = 122/255 (47%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A G K Q HS++V ++ + L +G D + LW + ++ G S V
Sbjct: 71 ASGGLK-QTLEGHSSSVQSVAFSPNG-QLLASGSSDTTIKLWNSASDSLKHTMEGHSDRV 128
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
+SVAF + G +LW+ + T+ GH +V F P G+ ASG +
Sbjct: 129 ESVAF----------SPNG--QLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAE 176
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+K+WD G HT GH+ + + F+PDGR + SG D +K+WD +G L H +
Sbjct: 177 KTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLE 236
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTL 241
H I S+ F P LLA+GS+D T+K WD T + + V ++ F PD + L
Sbjct: 237 GHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLL 296
Query: 242 FSGFDDNLKVYSWEP 256
SG DN + W+P
Sbjct: 297 ESGSGDNT-IKLWDP 310
Score = 295 (108.9 bits), Expect = 6.8e-24, Sum P(2) = 6.8e-24
Identities = 68/206 (33%), Positives = 106/206 (51%)
Query: 51 LMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHP 110
L +L G S +++V F L+ +G++ IKLWD + +TL GH S+ +V F P
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSP 93
Query: 111 FGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
G+ ASG DT +K+W+ HT +GH+ + ++ F+P+G+ +W+
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQ------------LWN 141
Query: 171 LTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVH 230
G L H + H + S+ F P LLA+GSA++T+K WD T L + V
Sbjct: 142 PAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVL 201
Query: 231 AITFHPDGRTLFSGFDDNLKVYSWEP 256
+ F PDGR L SG +D + W+P
Sbjct: 202 PLVFSPDGRLLASGSND-ATIKLWDP 226
Score = 287 (106.1 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 73/249 (29%), Positives = 117/249 (46%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G +LQ HS + ++ R L +G +D + LW +L G SS V SV
Sbjct: 31 GPELQTLEGHSDWIETVTFSPDG-RLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSV 89
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
AF L+ +G+S IKLW+ + T+ GH +V F P G+ + N
Sbjct: 90 AFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLW-------NP 142
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
I ++ HT +GH+ + ++ F+PDG+ + SG + +K+WD L H H
Sbjct: 143 AIGSLK-----HTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHS 197
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG 244
+ + F P LLA+GS D T+K WD + L + + ++ F P+G+ L SG
Sbjct: 198 NWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASG 257
Query: 245 FDD-NLKVY 252
D +K++
Sbjct: 258 SSDATIKLW 266
Score = 286 (105.7 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 71/196 (36%), Positives = 99/196 (50%)
Query: 42 LW--AIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGH 99
LW AIG + ++ G S V SVAF L+ +G++ IKLWD + TL GH
Sbjct: 139 LWNPAIG--SLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGH 196
Query: 100 KSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVS 159
+ + F P G ASG D +K+WD HT +GH+ I ++ F+P+G+ + S
Sbjct: 197 SNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLAS 256
Query: 160 GGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELI 219
G D +K+WD G H K H + S+ F P LL +GS D T+K WD T L
Sbjct: 257 GSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATGILK 316
Query: 220 GSTR-PEVTGVHAITF 234
S R P + V +I F
Sbjct: 317 HSMRTPGI--VRSIEF 330
Score = 249 (92.7 bits), Expect = 6.3e-18, P = 6.3e-18
Identities = 57/184 (30%), Positives = 92/184 (50%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
+ L +G ++ + LW +L G S+ V + F L+ +G++ IKLWD
Sbjct: 168 QLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPP 227
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ TL GH + ++ F P G+ ASG D +K+WD HT KGH+ + ++
Sbjct: 228 SGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSV 287
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEF-LLATGSADRT 207
F+PD + + SG DN +K+WD G L H + G +RSI+F +E L T +
Sbjct: 288 VFSPDSQLLESGSGDNTIKLWDPATGILKHSMRT-PGIVRSIEFS-IELPQLITNLGTFS 345
Query: 208 VKFW 211
++ W
Sbjct: 346 IQAW 349
Score = 216 (81.1 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 58/209 (27%), Positives = 94/209 (44%)
Query: 93 VRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTP 152
++TL GH V F P G ASG DT +K+WD G T +GH+ + ++ F+P
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSP 93
Query: 153 DGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
+G+ + SG D +K+W+ + L H + H + S+ F P G + W+
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSP------NG------QLWN 141
Query: 213 LETFELIGSTRPEVTG----VHAITFHPDGRTLFSGFDDNLKVYSWEPVICHDSVDMG-- 266
IGS + + G V ++ F PDG+ L SG + + W+ C +G
Sbjct: 142 ----PAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKT-IKLWDSATCGLKHTLGGH 196
Query: 267 --WSTLGDLCINDGKLLGCSFYRNSVGIW 293
W L + DG+LL ++ +W
Sbjct: 197 SNW-VLPLVFSPDGRLLASGSNDATIKLW 224
Score = 47 (21.6 bits), Expect = 6.8e-24, Sum P(2) = 6.8e-24
Identities = 21/85 (24%), Positives = 33/85 (38%)
Query: 792 TPTQMRLKSSENQVTST---PPRARLNSSIEGQATNIPIRRRFNRNVDQTTNVTRHRRSI 848
+P L S N T PP L ++EG + I F+ N Q +I
Sbjct: 206 SPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIE-SLAFSPN-GQLLASGSSDATI 263
Query: 849 SNTDQATSTTAHVAVKNNDDIATVI 873
D AT + H ++D + +V+
Sbjct: 264 KLWDTATGSFRHTLKGHSDMVLSVV 288
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 341 (125.1 bits), Expect = 4.2e-28, P = 4.2e-28
Identities = 84/287 (29%), Positives = 144/287 (50%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAF--------DSAEVLVLAGASTG 80
+ L+T LW + T + +L G ++ V +++F + ++V + + A+ G
Sbjct: 229 KLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEESDVNMASCAADG 288
Query: 81 VIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKG 140
+KLW L+ + + + GH V +HP G F + C D + ++WD+ + I +G
Sbjct: 289 SVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQEG 348
Query: 141 HTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIR---SIDFHPLEF 197
H++G++ + F PDG +GG D+ +VWDL G+ + F EGHI+ SI+F P F
Sbjct: 349 HSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCV---MFLEGHIKEIYSINFSPNGF 405
Query: 198 LLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHP-DGRTLFSG-FDDNLKVYS-- 253
+ATGS D K WDL I + V ++ F P DG L +G +D+ K+++
Sbjct: 406 HVATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHP 465
Query: 254 -WEPVIC---HDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVAD 296
W P+ H+ MG DL DG+L+ Y + +W+++
Sbjct: 466 GWSPLKTLAGHEGKVMGV----DLS-PDGQLIATCSYDRTFKLWMSE 507
Score = 259 (96.2 bits), Expect = 8.7e-19, P = 8.7e-19
Identities = 66/253 (26%), Positives = 115/253 (45%)
Query: 53 SLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFG 112
S G P+ F L++ + +G+ KLW + + ++RTL GH +N A+ FHP
Sbjct: 211 SQIGDDRPISYCQFSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQA 270
Query: 113 EF--------FASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDN 164
AS D ++K+W + I +GH+ + + + P GR++ + +D+
Sbjct: 271 TLTLEESDVNMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDH 330
Query: 165 VVKVWDLTAGK-LLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTR 223
++WDL + +LH + H + + FHP L TG D + WDL T +
Sbjct: 331 SWRLWDLEVQEEILHQ-EGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLE 389
Query: 224 PEVTGVHAITFHPDGRTLFSGFDDNL-KVYSWEPVICHDSVDMGWSTLGDLCI--NDGKL 280
+ +++I F P+G + +G DN KV+ C ++ + + + NDG
Sbjct: 390 GHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDGHY 449
Query: 281 LGCSFYRNSVGIW 293
L Y N+ IW
Sbjct: 450 LLTGAYDNTAKIW 462
Score = 159 (61.0 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 71/305 (23%), Positives = 114/305 (37%)
Query: 43 WAIGKPTALMS----LCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES-KMVRTLT 97
W PT+L L S P D+A ST IK +L ++ + V
Sbjct: 151 WYHEGPTSLKEARLWLAKYSLPRAVKRLDAARAQKEIPESTRTIKQQELHKNLRNVNNFC 210
Query: 98 ---GHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDG 154
G + +F P + + K+W + I T +GH + I F P
Sbjct: 211 SQIGDDRPISYCQFSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQA 270
Query: 155 RWVV--------SGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADR 206
+ S D VK+W L + + + D + H + + +HP L T D
Sbjct: 271 TLTLEESDVNMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDH 330
Query: 207 TVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEPVICHDSVDM 265
+ + WDLE E I GVH + FHPDG +G D +V+ C ++
Sbjct: 331 SWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEG 390
Query: 266 GWSTLGDLCIN-DGKLLGCSFYRNSVGIWVADVSHVEP-YGVGAPEPDQSICTEVKFNPP 323
+ + + +G + N+ +W D+ Y + A Q++ + VKF P
Sbjct: 391 HIKEIYSINFSPNGFHVATGSGDNACKVW--DLRQRRCIYTIPA---HQNLVSSVKFQPN 445
Query: 324 GSHSL 328
H L
Sbjct: 446 DGHYL 450
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 307 (113.1 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 82/273 (30%), Positives = 124/273 (45%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H VNC + R L+T DD V +W L L G PV S F L+
Sbjct: 25 HHGEVNCSAFSPDG-RTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLI 83
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
+ +S I+LWD+ SK + L GH+ + V F P + ASG D +W+++
Sbjct: 84 ASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGR 143
Query: 134 CIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDF- 192
+H GH I + F+P + +G +D+ V +WDL A + + EGH +I
Sbjct: 144 RVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCL 203
Query: 193 -HPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS-GFDDNLK 250
+ LLA+GS D+T+ W T L + V+++ F PD L S G+ +K
Sbjct: 204 CYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVK 263
Query: 251 VYSWEPVICHDSVDMGWSTLGDLCI--NDGKLL 281
V+ C +++ G + CI DGKLL
Sbjct: 264 VWDCLTGKCLETLK-GMLDVAHACIFTPDGKLL 295
Score = 288 (106.4 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 67/239 (28%), Positives = 113/239 (47%)
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
V+ AF +L + G + +W + +++ L GH+ + F P G AS
Sbjct: 29 VNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSS 88
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
D ++++WD+ + C+H KGH R + T+ F+PD + + SGG+D VW++ +G+ +H
Sbjct: 89 DHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLL 148
Query: 181 KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTR--PEVTG-VHAITFHPD 237
H I+S DF P LATGS D TV WDL + S TG + + +
Sbjct: 149 VGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSAS 208
Query: 238 GRTLFSGFDDNLKVYSWEPVICHDSVDMGWSTL--GDLCINDGKL-LGCSFYRNSVGIW 293
G +D + V W+P + + + T+ L + +L L + Y +V +W
Sbjct: 209 GLLASGSWDKTICV--WKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVW 265
Score = 278 (102.9 bits), Expect = 5.2e-23, P = 5.2e-23
Identities = 69/246 (28%), Positives = 110/246 (44%)
Query: 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
K G L H V R + + D + LW + + L L G V+
Sbjct: 56 KSGRLLWRLAGHRGPVKSCCFSPDG-RLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVE 114
Query: 63 SVAFD-SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
+V+F ++ L G I +W+++ + V L GH + + +F P + A+G D
Sbjct: 115 TVSFSPDSKQLASGGWDKRAI-VWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWD 173
Query: 122 TNLKIWDIRKKGCI---HTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLH 178
+ + IWD+R + H +GHT I+ + ++ G + SG +D + VW T L
Sbjct: 174 STVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASGL-LASGSWDKTICVWKPTTNNLPL 232
Query: 179 DFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDG 238
K H + S+ F P E LA+ RTVK WD T + + + + + HA F PDG
Sbjct: 233 QLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDG 292
Query: 239 RTLFSG 244
+ L SG
Sbjct: 293 KLLVSG 298
Score = 195 (73.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 53/194 (27%), Positives = 82/194 (42%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H +V +S + + L +GG D++ +W + + L G + S F +
Sbjct: 109 HQRSVETVSFSPDS-KQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSL 167
Query: 74 LAGASTGVIKLWDLEESKMV---RTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
G+ + +WDL S V L GH N + + + G ASG D + +W
Sbjct: 168 ATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASG-LLASGSWDKTICVWKPT 226
Query: 131 KKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSI 190
KGHT +N++ F+PD + S G+ VKVWD GK L K +
Sbjct: 227 TNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHAC 286
Query: 191 DFHPLEFLLATGSA 204
F P LL +G+A
Sbjct: 287 IFTPDGKLLVSGAA 300
Score = 171 (65.3 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 37/123 (30%), Positives = 61/123 (49%)
Query: 133 GCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDF 192
G + Y H +N F+PDGR +++ D V VW +G+LL H G ++S F
Sbjct: 17 GRVRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCF 76
Query: 193 HPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVY 252
P L+A+ S+D +++ WD+ + + + V ++F PD + L SG D +
Sbjct: 77 SPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIV 136
Query: 253 SWE 255
WE
Sbjct: 137 -WE 138
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 322 (118.4 bits), Expect = 8.0e-26, P = 8.0e-26
Identities = 76/293 (25%), Positives = 134/293 (45%)
Query: 6 YKLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
+KL ++ H V CI++ + ++ +TG D+ + +W + +SL G S V V
Sbjct: 194 WKLYRVISGHLGWVRCIAV-EPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 252
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
+ + + +K WDLE +K++R GH S ++ HP + + D+
Sbjct: 253 IVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTA 312
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
+IWD+R K +HT GHT + T+R +++G D +++WDL AGK H+
Sbjct: 313 RIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHK 372
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG 244
+R++ HPL + A+GS D +K W I + ++ + + DG L SG
Sbjct: 373 KSVRAVVLHPLHYTFASGSPDN-IKQWKFPDGGFIQNLSGHNAIINTLAVNTDG-VLVSG 430
Query: 245 FDDN-LKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVAD 296
D+ + ++ W V G L G + C+F R+ + A+
Sbjct: 431 ADNGTMHLWDWRTGYNFQRVHAAVQP-GSLDSESG-IFACAFDRSESRLLTAE 481
Score = 215 (80.7 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 61/192 (31%), Positives = 89/192 (46%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L+T D +W + ++ +L G ++ V +V +AE ++ G+ I+LWDL
Sbjct: 303 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAG 362
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
K TLT HK + AV HP FASG D N+K W G I GH INT+
Sbjct: 363 KTRVTLTNHKKSVRAVVLHPLHYTFASGSPD-NIKQWKFPDGGFIQNLSGHNAIINTLAV 421
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDF-KFH----------EGHIRSIDFHPLEFLL 199
DG +VSG + + +WD G ++F + H E I + F E L
Sbjct: 422 NTDGV-LVSGADNGTMHLWDWRTG---YNFQRVHAAVQPGSLDSESGIFACAFDRSESRL 477
Query: 200 ATGSADRTVKFW 211
T AD+T+K +
Sbjct: 478 LTAEADKTIKVY 489
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 319 (117.4 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 68/251 (27%), Positives = 121/251 (48%)
Query: 6 YKLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
+KL ++ H V CI++ + ++ +TG D+ + +W + +SL G S V V
Sbjct: 193 WKLYRVISGHLGWVRCIAV-EPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 251
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
+ + + +K WDLE +K++R GH S ++ HP + + D+
Sbjct: 252 IVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTA 311
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
+IWD+R K +HT GHT + T+R +++G D +++WDL AGK H+
Sbjct: 312 RIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHK 371
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG 244
+R++ HP + A+GS D +K W I + ++ +T + DG L SG
Sbjct: 372 KSVRAVVLHPRHYTFASGSPDN-IKQWKFPDGSFIQNLSGHNAIINTLTVNSDG-VLVSG 429
Query: 245 FDDN-LKVYSW 254
D+ + ++ W
Sbjct: 430 ADNGTMHLWDW 440
Score = 209 (78.6 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 66/211 (31%), Positives = 96/211 (45%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L+T D +W + ++ +L G ++ V +V +AE ++ G+ I+LWDL
Sbjct: 302 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAG 361
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
K TLT HK + AV HP FASG D N+K W I GH INT+
Sbjct: 362 KTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGHNAIINTLTV 420
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDF-KFH----------EGHIRSIDFHPLEFLL 199
DG +VSG + + +WD G ++F + H E I + F E L
Sbjct: 421 NSDGV-LVSGADNGTMHLWDWRTG---YNFQRVHAAVQPGSLDSESGIFACAFDQSESRL 476
Query: 200 ATGSADRTVKFW---DLETFELIG-STRPEV 226
T AD+T+K + D T E S +PE+
Sbjct: 477 LTAEADKTIKVYKEDDTATEETHPVSWKPEI 507
Score = 182 (69.1 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 58/272 (21%), Positives = 113/272 (41%)
Query: 7 KLQ-EFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVA 65
KL+ H + V + + ++ +L + G+D++V W + + G S V +
Sbjct: 236 KLKLSLTGHISTVRGVIVSTRS-PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLD 294
Query: 66 FD-SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
+ +VLV + ++WD+ V TL+GH + V +G DT +
Sbjct: 295 LHPTIDVLVTCSRDS-TARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTI 353
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
++WD+ T H + + + P SG DN+ K W G + + H
Sbjct: 354 RLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNI-KQWKFPDGSFIQNLSGHN 412
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLET---FELI-GSTRP----EVTGVHAITF-H 235
I ++ + + +L +G+ + T+ WD T F+ + + +P +G+ A F
Sbjct: 413 AIINTLTVNS-DGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQ 471
Query: 236 PDGRTLFSGFDDNLKVYSWEPVICHDSVDMGW 267
+ R L + D +KVY + ++ + W
Sbjct: 472 SESRLLTAEADKTIKVYKEDDTATEETHPVSW 503
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 319 (117.4 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 76/293 (25%), Positives = 134/293 (45%)
Query: 6 YKLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
+KL ++ H V CI++ + ++ +TG D+ + +W + +SL G S V V
Sbjct: 193 WKLYRVISGHLGWVRCIAV-EPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 251
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
+ + + +K WDLE +K++R GH S ++ HP + + D+
Sbjct: 252 IVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTA 311
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
+IWD+R K +HT GHT + T+R +++G D +++WDL AGK H+
Sbjct: 312 RIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHK 371
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG 244
+R++ HPL + A+GS D +K W I + ++ + + DG L SG
Sbjct: 372 KSVRAVVLHPLLYTFASGSPDN-IKQWKFPDGGFIQNLSGHNAIINTLAVNADG-VLVSG 429
Query: 245 FDDN-LKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVAD 296
D+ + ++ W V G L G + C+F R+ + A+
Sbjct: 430 ADNGTMHLWDWRTGYNFQRVHAAVQP-GSLDSESG-IFACAFDRSESRLLTAE 480
Score = 213 (80.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 61/192 (31%), Positives = 89/192 (46%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L+T D +W + ++ +L G ++ V +V +AE ++ G+ I+LWDL
Sbjct: 302 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAG 361
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
K TLT HK + AV HP FASG D N+K W G I GH INT+
Sbjct: 362 KTRVTLTNHKKSVRAVVLHPLLYTFASGSPD-NIKQWKFPDGGFIQNLSGHNAIINTLAV 420
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDF-KFH----------EGHIRSIDFHPLEFLL 199
DG +VSG + + +WD G ++F + H E I + F E L
Sbjct: 421 NADGV-LVSGADNGTMHLWDWRTG---YNFQRVHAAVQPGSLDSESGIFACAFDRSESRL 476
Query: 200 ATGSADRTVKFW 211
T AD+T+K +
Sbjct: 477 LTAEADKTIKVY 488
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 319 (117.4 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 68/251 (27%), Positives = 121/251 (48%)
Query: 6 YKLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
+KL ++ H V CI++ + ++ +TG D+ + +W + +SL G S V V
Sbjct: 194 WKLYRVISGHLGWVRCIAV-EPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 252
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
+ + + +K WDLE +K++R GH S ++ HP + + D+
Sbjct: 253 IVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTA 312
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
+IWD+R K +HT GHT + T+R +++G D +++WDL AGK H+
Sbjct: 313 RIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHK 372
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG 244
+R++ HP + A+GS D +K W I + ++ +T + DG L SG
Sbjct: 373 KSVRAVVLHPRHYTFASGSPDN-IKQWKFPDGSFIQNLSGHNAIINTLTVNSDG-VLVSG 430
Query: 245 FDDN-LKVYSW 254
D+ + ++ W
Sbjct: 431 ADNGTMHLWDW 441
Score = 209 (78.6 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 66/211 (31%), Positives = 96/211 (45%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L+T D +W + ++ +L G ++ V +V +AE ++ G+ I+LWDL
Sbjct: 303 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAG 362
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
K TLT HK + AV HP FASG D N+K W I GH INT+
Sbjct: 363 KTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGHNAIINTLTV 421
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDF-KFH----------EGHIRSIDFHPLEFLL 199
DG +VSG + + +WD G ++F + H E I + F E L
Sbjct: 422 NSDGV-LVSGADNGTMHLWDWRTG---YNFQRVHAAVQPGSLDSESGIFACAFDQSESRL 477
Query: 200 ATGSADRTVKFW---DLETFELIG-STRPEV 226
T AD+T+K + D T E S +PE+
Sbjct: 478 LTAEADKTIKVYREDDTATEETHPVSWKPEI 508
Score = 181 (68.8 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 58/272 (21%), Positives = 113/272 (41%)
Query: 7 KLQ-EFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVA 65
KL+ H + V + + ++ +L + G+D++V W + + G S V +
Sbjct: 237 KLKLSLTGHISTVRGVIVSTRS-PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLD 295
Query: 66 FD-SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
+ +VLV + ++WD+ V TL+GH + V +G DT +
Sbjct: 296 LHPTIDVLVTCSRDS-TARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTI 354
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
++WD+ T H + + + P SG DN+ K W G + + H
Sbjct: 355 RLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNI-KQWKFPDGSFIQNLSGHN 413
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLET---FELI-GSTRP----EVTGVHAITF-H 235
I ++ + + +L +G+ + T+ WD T F+ + + +P +G+ A F
Sbjct: 414 AIINTLTVNS-DGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQ 472
Query: 236 PDGRTLFSGFDDNLKVYSWEPVICHDSVDMGW 267
+ R L + D +KVY + ++ + W
Sbjct: 473 SESRLLTAEADKTIKVYREDDTATEETHPVSW 504
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 319 (117.4 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 68/251 (27%), Positives = 121/251 (48%)
Query: 6 YKLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
+KL ++ H V CI++ + ++ +TG D+ + +W + +SL G S V V
Sbjct: 195 WKLYRVISGHLGWVRCIAV-EPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 253
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
+ + + +K WDLE +K++R GH S ++ HP + + D+
Sbjct: 254 IVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTA 313
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
+IWD+R K +HT GHT + T+R +++G D +++WDL AGK H+
Sbjct: 314 RIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHK 373
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG 244
+R++ HP + A+GS D +K W I + ++ +T + DG L SG
Sbjct: 374 KSVRAVVLHPRHYTFASGSPDN-IKQWKFPDGSFIQNLSGHNAIINTLTVNSDG-VLVSG 431
Query: 245 FDDN-LKVYSW 254
D+ + ++ W
Sbjct: 432 ADNGTMHLWDW 442
Score = 209 (78.6 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 66/211 (31%), Positives = 96/211 (45%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L+T D +W + ++ +L G ++ V +V +AE ++ G+ I+LWDL
Sbjct: 304 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAG 363
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
K TLT HK + AV HP FASG D N+K W I GH INT+
Sbjct: 364 KTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGHNAIINTLTV 422
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDF-KFH----------EGHIRSIDFHPLEFLL 199
DG +VSG + + +WD G ++F + H E I + F E L
Sbjct: 423 NSDGV-LVSGADNGTMHLWDWRTG---YNFQRVHAAVQPGSLDSESGIFACAFDQSESRL 478
Query: 200 ATGSADRTVKFW---DLETFELIG-STRPEV 226
T AD+T+K + D T E S +PE+
Sbjct: 479 LTAEADKTIKVYKEDDTATEETHPVSWKPEI 509
Score = 182 (69.1 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 58/272 (21%), Positives = 113/272 (41%)
Query: 7 KLQ-EFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVA 65
KL+ H + V + + ++ +L + G+D++V W + + G S V +
Sbjct: 238 KLKLSLTGHISTVRGVIVSTRS-PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLD 296
Query: 66 FD-SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
+ +VLV + ++WD+ V TL+GH + V +G DT +
Sbjct: 297 LHPTIDVLVTCSRDS-TARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTI 355
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
++WD+ T H + + + P SG DN+ K W G + + H
Sbjct: 356 RLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNI-KQWKFPDGSFIQNLSGHN 414
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLET---FELI-GSTRP----EVTGVHAITF-H 235
I ++ + + +L +G+ + T+ WD T F+ + + +P +G+ A F
Sbjct: 415 AIINTLTVNS-DGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQ 473
Query: 236 PDGRTLFSGFDDNLKVYSWEPVICHDSVDMGW 267
+ R L + D +KVY + ++ + W
Sbjct: 474 SESRLLTAEADKTIKVYKEDDTATEETHPVSW 505
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 319 (117.4 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 77/248 (31%), Positives = 125/248 (50%)
Query: 60 PVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGC 119
P +V+ D +V + + A+ G +KLW LE + V + GH V +HP G F + C
Sbjct: 282 PKATVSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTC 341
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
D + ++WD+ + I +GH++G+ I F DG +GG D +VWDL G+ +
Sbjct: 342 YDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCI-- 399
Query: 180 FKFHEGHIRSI---DFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHP 236
F EGH++ I +F P + +ATGS D T K WDL + I + V + F P
Sbjct: 400 -MFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEP 458
Query: 237 D-GRTLFSG-FDDNLKVYS---WEPVIC---HDSVDMGWSTLGDLCINDGKLLGCSFYRN 288
+ G L +G +D+ K+++ W P+ H+ MG D+ + DG+L+ Y
Sbjct: 459 NHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL----DISL-DGQLIATCSYDR 513
Query: 289 SVGIWVAD 296
+ +W A+
Sbjct: 514 TFKLWTAE 521
Score = 237 (88.5 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 63/238 (26%), Positives = 105/238 (44%)
Query: 21 ISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTG 80
+S+ KK L + D V LW++ + + G S V V + + +
Sbjct: 286 VSLDKKDVN-LASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDH 344
Query: 81 VIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKG 140
+LWDLE + + GH + FH G +G +D ++WD+R CI +G
Sbjct: 345 SWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEG 404
Query: 141 HTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLE--FL 198
H + I + F+P+G V +G DN KVWDL K ++ H+ + + F P FL
Sbjct: 405 HLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFL 464
Query: 199 LATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS-GFDDNLKVYSWE 255
L TG+ D T K W + + + V + DG+ + + +D K+++ E
Sbjct: 465 L-TGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE 521
Score = 230 (86.0 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 65/253 (25%), Positives = 110/253 (43%)
Query: 53 SLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFG 112
S G P+ F L+ +G+ KLW + + +V TL GH +N A+ FHP
Sbjct: 225 SQIGDDRPLSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVFHPKA 284
Query: 113 EF--------FASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDN 164
AS D ++K+W + + +GH+ + + + P GR++ + +D+
Sbjct: 285 TVSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDH 344
Query: 165 VVKVWDLTAGK-LLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTR 223
++WDL A + +LH + H + I FH L TG D + WDL T I
Sbjct: 345 SWRLWDLEAQEEILHQ-EGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLE 403
Query: 224 PEVTGVHAITFHPDGRTLFSGFDDNL-KVYSWEPVICHDSVDMGWSTLGDLCI--NDGKL 280
+ ++ + F P+G + +G DN KV+ C ++ + + + N G
Sbjct: 404 GHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNF 463
Query: 281 LGCSFYRNSVGIW 293
L Y N+ IW
Sbjct: 464 LLTGAYDNTAKIW 476
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 318 (117.0 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 69/251 (27%), Positives = 121/251 (48%)
Query: 6 YKLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
+KL ++ H V CI++ + ++ +TG D+ + +W + +SL G S V V
Sbjct: 196 WKLYRVISGHLGWVRCIAV-EPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 254
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
+ + + +K WDLE +K++R GH S ++ HP + + D+
Sbjct: 255 IVSARSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTA 314
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
+IWD+R K +HT GHT + T++ VV+G D +++WDL AGK H+
Sbjct: 315 RIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHK 374
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG 244
+R++ HP + A+GS D +K W I + ++ +T + DG L SG
Sbjct: 375 KSVRAVILHPRHYTFASGSPDN-IKQWKFPDGNFIQNLSGHNAIINTLTVNSDG-VLVSG 432
Query: 245 FDDN-LKVYSW 254
D+ + ++ W
Sbjct: 433 ADNGTMHLWDW 443
Score = 207 (77.9 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 67/211 (31%), Positives = 96/211 (45%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L+T D +W + ++ +L G ++ V +V +AE V+ G+ I+LWDL
Sbjct: 305 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAG 364
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
K TLT HK + AV HP FASG D N+K W I GH INT+
Sbjct: 365 KTRVTLTNHKKSVRAVILHPRHYTFASGSPD-NIKQWKFPDGNFIQNLSGHNAIINTLTV 423
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDF-KFH----------EGHIRSIDFHPLEFLL 199
DG +VSG + + +WD G ++F + H E I + F E L
Sbjct: 424 NSDGV-LVSGADNGTMHLWDWRTG---YNFQRVHAAVQPGSLDSESGIFACVFDQSESRL 479
Query: 200 ATGSADRTVKFW---DLETFELIG-STRPEV 226
T AD+T+K + D T E S +PE+
Sbjct: 480 LTAEADKTIKVYKEDDTATEETHPISWKPEI 510
Score = 183 (69.5 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 58/272 (21%), Positives = 114/272 (41%)
Query: 7 KLQ-EFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVA 65
KL+ H + V + + ++ +L + G+D++V W + + G S V +
Sbjct: 239 KLKLSLTGHISTVRGVIVSARS-PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLD 297
Query: 66 FD-SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
+ +VLV + ++WD+ V TL+GH + V+ +G DT +
Sbjct: 298 LHPTIDVLVTCSRDS-TARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTI 356
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
++WD+ T H + + + P SG DN+ K W G + + H
Sbjct: 357 RLWDLVAGKTRVTLTNHKKSVRAVILHPRHYTFASGSPDNI-KQWKFPDGNFIQNLSGHN 415
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLET---FELI-GSTRP----EVTGVHAITF-H 235
I ++ + + +L +G+ + T+ WD T F+ + + +P +G+ A F
Sbjct: 416 AIINTLTVNS-DGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACVFDQ 474
Query: 236 PDGRTLFSGFDDNLKVYSWEPVICHDSVDMGW 267
+ R L + D +KVY + ++ + W
Sbjct: 475 SESRLLTAEADKTIKVYKEDDTATEETHPISW 506
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 280 (103.6 bits), Expect = 3.2e-25, Sum P(2) = 3.2e-25
Identities = 70/263 (26%), Positives = 109/263 (41%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
R Y+ F H V C++ L +G D+ V +W ++ V S
Sbjct: 15 RAYR---FTGHKDAVTCVNFSPSG-HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRS 70
Query: 64 VAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN 123
V F S + + +K+W K + +L+ H + +F P G S D
Sbjct: 71 VHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKT 130
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
+K+WD + C+H+Y H + + F P G + + G DN VKVWD+ +LL ++ H
Sbjct: 131 VKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLH 190
Query: 184 EGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS 243
+ + FHP L T S+D T+K DL L+ + + F G S
Sbjct: 191 SAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 250
Query: 244 GFDDNLKVYSWEPVICHDSVDMG 266
G D +V W+ D VD G
Sbjct: 251 GGSDE-QVMVWKSNF--DIVDHG 270
Score = 279 (103.3 bits), Expect = 4.1e-25, Sum P(2) = 4.1e-25
Identities = 63/219 (28%), Positives = 104/219 (47%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAE 70
F AH+A V + F +T DD+ V +WA + L SL + V F
Sbjct: 61 FRAHTATVRSVHFCSDGQSF-VTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDG 119
Query: 71 VLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
L+++ + +KLWD + V + H T V+FHP G A+ MD +K+WD+R
Sbjct: 120 RLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 179
Query: 131 KKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSI 190
+ Y+ H+ +N + F P G ++++ D+ +K+ DL G+LL+ H+G ++
Sbjct: 180 THRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTV 239
Query: 191 DFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGV 229
F A+G +D V W F+++ EVT V
Sbjct: 240 AFSRTGEYFASGGSDEQVMVWK-SNFDIVD--HGEVTKV 275
Score = 266 (98.7 bits), Expect = 5.9e-22, Sum P(2) = 5.9e-22
Identities = 55/216 (25%), Positives = 98/216 (45%)
Query: 37 DQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTL 96
D + +W + + G V V F + L+ +G+ +++W
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVF 61
Query: 97 TGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRW 156
H + +V F G+ F + D +K+W ++ + + H + +F+PDGR
Sbjct: 62 RAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRL 121
Query: 157 VVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETF 216
+VS D VK+WD ++ + +H + H G + +DFHP +A D TVK WD+ T
Sbjct: 122 IVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTH 181
Query: 217 ELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN-LKV 251
L+ + V+ ++FHP G L + D+ LK+
Sbjct: 182 RLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKI 217
Score = 178 (67.7 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 46/177 (25%), Positives = 77/177 (43%)
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
MD+ L +W ++ + + + GH + + F+P G + SG D V++W
Sbjct: 1 MDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV 60
Query: 180 FKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGR 239
F+ H +RS+ F T S D+TVK W + + S + V F PDGR
Sbjct: 61 FRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGR 120
Query: 240 TLFSGFDDN-LKVYSWEPVIC-HDSVDMG-WSTLGDLCINDGKLLGCSFYRNSVGIW 293
+ S DD +K++ C H + G + T D + G + + N+V +W
Sbjct: 121 LIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPS-GTCIAAAGMDNTVKVW 176
Score = 46 (21.3 bits), Expect = 3.2e-25, Sum P(2) = 3.2e-25
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 364 KPVASQKIGPLNSPKV---VPPLDSEEISDLQTEKQNPAIGVPE 404
+P A+ N P+V VPP + +Q++ Q P + VP+
Sbjct: 277 RPPATLASSMGNLPEVDFPVPPGRGRSVESVQSQPQEP-VSVPQ 319
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 297 (109.6 bits), Expect = 4.9e-25, P = 4.9e-25
Identities = 60/221 (27%), Positives = 115/221 (52%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
++ G +++ H++ VN ++ + + TG DD V LW I K A+ + + V
Sbjct: 139 SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQV 197
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
+V F+ +++G IK+WDL ++K+ T+ GH + T + G + S MD
Sbjct: 198 LAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD 257
Query: 122 TNLKIWDIR----KKGCIHTYKGHTRGI--NTIR--FTPDGRWVVSGGFDNVVKVWDLTA 173
+++WD+R K+ C+ ++G+ N +R ++PDG + +G D V VWD T+
Sbjct: 258 NTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS 317
Query: 174 GKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLE 214
++L+ H G I + FHP E ++ + S+D+ + +++
Sbjct: 318 RRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
Score = 242 (90.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 65/254 (25%), Positives = 111/254 (43%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAI-GKPTALMSLCGLSSPVDSVAFDSAEVL 72
H V C L + G D+ + LW + G +L G S V + +++ +
Sbjct: 66 HEGEVYCCKFHPNGST-LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKS---NCTAVEFHPFGEFFASGCMDTNLKIWDI 129
+ + ++ + +WD E + V+ L GH S +C P + +G D +K+WDI
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP--QLVCTGSDDGTVKLWDI 182
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
RKK I T++ +T + + F ++SGG DN +KVWDL KL + + H +
Sbjct: 183 RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFE--------LIGSTRPEVTGVHAITFHPDGRTL 241
+ L + + D TV+ WD+ F G+ + ++ PDG +
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKI 301
Query: 242 FSGFDDNLKVYSWE 255
+G D VY W+
Sbjct: 302 AAGSADRF-VYVWD 314
Score = 233 (87.1 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 62/234 (26%), Positives = 109/234 (46%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV-AFDSAEVLVLAGASTGVIKLWDLEE 89
L + D+ V +W + L G +S V+S LV G+ G +KLWD+ +
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 184
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
++T + AV F+ + SG +D ++K+WD+R+ +T +GH + +
Sbjct: 185 KAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 243
Query: 150 FTPDGRWVVSGGFDNVVKVWDLT--AGK--LLHDFK--FH--EGHIRSIDFHPLEFLLAT 201
+ +G +++S DN V+VWD+ A K + F+ H E ++ + P +A
Sbjct: 244 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAA 303
Query: 202 GSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
GSADR V WD + ++ ++ + FHPD + S D ++Y E
Sbjct: 304 GSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDK-RLYMGE 356
Score = 194 (73.4 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 60/217 (27%), Positives = 95/217 (43%)
Query: 93 VRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIH--TYKGHTRGINTIRF 150
+ L+GH+ +FHP G AS D + +W++ C + T KGH+ + + +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHY 118
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEF---LLATGSADRT 207
DG + S D V VWD G+ + K H + S +P L+ TGS D T
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC--YPARRGPQLVCTGSDDGT 176
Query: 208 VKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSW-EPVICHDSVDM 265
VK WD+ I T V A+TF+ + SG D+++KV+ + + +
Sbjct: 177 VKLWDIRKKAAI-QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGH 235
Query: 266 GWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHVEP 302
S G ++G L + N+V +W DV P
Sbjct: 236 ADSVTGLSLSSEGSYLLSNAMDNTVRVW--DVRPFAP 270
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 296 (109.3 bits), Expect = 6.2e-25, P = 6.2e-25
Identities = 60/221 (27%), Positives = 115/221 (52%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
++ G +++ H++ VN ++ + + TG DD V LW I K A+ + + V
Sbjct: 139 SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQV 197
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
+V F+ +++G IK+WDL ++K+ T+ GH + T + G + S MD
Sbjct: 198 LAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD 257
Query: 122 TNLKIWDIR----KKGCIHTYKGHTRGI--NTIR--FTPDGRWVVSGGFDNVVKVWDLTA 173
+++WD+R K+ C+ ++G+ N +R ++PDG + +G D V VWD T+
Sbjct: 258 NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS 317
Query: 174 GKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLE 214
++L+ H G I + FHP E ++ + S+D+ + +++
Sbjct: 318 RRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
Score = 242 (90.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 65/254 (25%), Positives = 111/254 (43%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAI-GKPTALMSLCGLSSPVDSVAFDSAEVL 72
H V C L + G D+ + LW + G +L G S V + +++ +
Sbjct: 66 HEGEVYCCKFHPNGST-LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKS---NCTAVEFHPFGEFFASGCMDTNLKIWDI 129
+ + ++ + +WD E + V+ L GH S +C P + +G D +K+WDI
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP--QLVCTGSDDGTVKLWDI 182
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
RKK I T++ +T + + F ++SGG DN +KVWDL KL + + H +
Sbjct: 183 RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFE--------LIGSTRPEVTGVHAITFHPDGRTL 241
+ L + + D TV+ WD+ F G+ + ++ PDG +
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKI 301
Query: 242 FSGFDDNLKVYSWE 255
+G D VY W+
Sbjct: 302 AAGSADRF-VYVWD 314
Score = 235 (87.8 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 59/234 (25%), Positives = 107/234 (45%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV-AFDSAEVLVLAGASTGVIKLWDLEE 89
L + D+ V +W + L G +S V+S LV G+ G +KLWD+ +
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 184
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
++T + AV F+ + SG +D ++K+WD+R+ +T +GH + +
Sbjct: 185 KAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 243
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTA-GKLLHDFKFHEGHIRSID-------FHPLEFLLAT 201
+ +G +++S DN V+VWD+ K +G++ + + + P +A
Sbjct: 244 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAA 303
Query: 202 GSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
GSADR V WD + ++ ++ + FHPD + S D ++Y E
Sbjct: 304 GSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDK-RLYMGE 356
Score = 194 (73.4 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 60/217 (27%), Positives = 95/217 (43%)
Query: 93 VRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIH--TYKGHTRGINTIRF 150
+ L+GH+ +FHP G AS D + +W++ C + T KGH+ + + +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHY 118
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEF---LLATGSADRT 207
DG + S D V VWD G+ + K H + S +P L+ TGS D T
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC--YPARRGPQLVCTGSDDGT 176
Query: 208 VKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSW-EPVICHDSVDM 265
VK WD+ I T V A+TF+ + SG D+++KV+ + + +
Sbjct: 177 VKLWDIRKKAAI-QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGH 235
Query: 266 GWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHVEP 302
S G ++G L + N+V +W DV P
Sbjct: 236 ADSVTGLSLSSEGSYLLSNAMDNTVRVW--DVRPFAP 270
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 296 (109.3 bits), Expect = 6.2e-25, P = 6.2e-25
Identities = 60/221 (27%), Positives = 115/221 (52%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
++ G +++ H++ VN ++ + + TG DD V LW I K A+ + + V
Sbjct: 138 SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQV 196
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
+V F+ +++G IK+WDL ++K+ T+ GH + T + G + S MD
Sbjct: 197 LAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD 256
Query: 122 TNLKIWDIR----KKGCIHTYKGHTRGI--NTIR--FTPDGRWVVSGGFDNVVKVWDLTA 173
+++WD+R K+ C+ ++G+ N +R ++PDG + +G D V VWD T+
Sbjct: 257 NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS 316
Query: 174 GKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLE 214
++L+ H G I + FHP E ++ + S+D+ + +++
Sbjct: 317 RRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEIQ 357
Score = 242 (90.2 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 65/254 (25%), Positives = 111/254 (43%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAI-GKPTALMSLCGLSSPVDSVAFDSAEVL 72
H V C L + G D+ + LW + G +L G S V + +++ +
Sbjct: 65 HEGEVYCCKFHPNGST-LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 123
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKS---NCTAVEFHPFGEFFASGCMDTNLKIWDI 129
+ + ++ + +WD E + V+ L GH S +C P + +G D +K+WDI
Sbjct: 124 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP--QLVCTGSDDGTVKLWDI 181
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
RKK I T++ +T + + F ++SGG DN +KVWDL KL + + H +
Sbjct: 182 RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 240
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFE--------LIGSTRPEVTGVHAITFHPDGRTL 241
+ L + + D TV+ WD+ F G+ + ++ PDG +
Sbjct: 241 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKI 300
Query: 242 FSGFDDNLKVYSWE 255
+G D VY W+
Sbjct: 301 AAGSADRF-VYVWD 313
Score = 235 (87.8 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 59/234 (25%), Positives = 107/234 (45%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV-AFDSAEVLVLAGASTGVIKLWDLEE 89
L + D+ V +W + L G +S V+S LV G+ G +KLWD+ +
Sbjct: 124 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 183
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
++T + AV F+ + SG +D ++K+WD+R+ +T +GH + +
Sbjct: 184 KAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 242
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTA-GKLLHDFKFHEGHIRSID-------FHPLEFLLAT 201
+ +G +++S DN V+VWD+ K +G++ + + + P +A
Sbjct: 243 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAA 302
Query: 202 GSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
GSADR V WD + ++ ++ + FHPD + S D ++Y E
Sbjct: 303 GSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDK-RLYMGE 355
Score = 194 (73.4 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 60/217 (27%), Positives = 95/217 (43%)
Query: 93 VRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIH--TYKGHTRGINTIRF 150
+ L+GH+ +FHP G AS D + +W++ C + T KGH+ + + +
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHY 117
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEF---LLATGSADRT 207
DG + S D V VWD G+ + K H + S +P L+ TGS D T
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC--YPARRGPQLVCTGSDDGT 175
Query: 208 VKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSW-EPVICHDSVDM 265
VK WD+ I T V A+TF+ + SG D+++KV+ + + +
Sbjct: 176 VKLWDIRKKAAI-QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGH 234
Query: 266 GWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHVEP 302
S G ++G L + N+V +W DV P
Sbjct: 235 ADSVTGLSLSSEGSYLLSNAMDNTVRVW--DVRPFAP 269
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 296 (109.3 bits), Expect = 6.2e-25, P = 6.2e-25
Identities = 60/221 (27%), Positives = 115/221 (52%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
++ G +++ H++ VN ++ + + TG DD V LW I K A+ + + V
Sbjct: 139 SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQV 197
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
+V F+ +++G IK+WDL ++K+ T+ GH + T + G + S MD
Sbjct: 198 LAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD 257
Query: 122 TNLKIWDIR----KKGCIHTYKGHTRGI--NTIR--FTPDGRWVVSGGFDNVVKVWDLTA 173
+++WD+R K+ C+ ++G+ N +R ++PDG + +G D V VWD T+
Sbjct: 258 NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS 317
Query: 174 GKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLE 214
++L+ H G I + FHP E ++ + S+D+ + +++
Sbjct: 318 RRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
Score = 242 (90.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 65/254 (25%), Positives = 111/254 (43%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAI-GKPTALMSLCGLSSPVDSVAFDSAEVL 72
H V C L + G D+ + LW + G +L G S V + +++ +
Sbjct: 66 HEGEVYCCKFHPNGST-LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKS---NCTAVEFHPFGEFFASGCMDTNLKIWDI 129
+ + ++ + +WD E + V+ L GH S +C P + +G D +K+WDI
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP--QLVCTGSDDGTVKLWDI 182
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
RKK I T++ +T + + F ++SGG DN +KVWDL KL + + H +
Sbjct: 183 RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFE--------LIGSTRPEVTGVHAITFHPDGRTL 241
+ L + + D TV+ WD+ F G+ + ++ PDG +
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKI 301
Query: 242 FSGFDDNLKVYSWE 255
+G D VY W+
Sbjct: 302 AAGSADRF-VYVWD 314
Score = 235 (87.8 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 59/234 (25%), Positives = 107/234 (45%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV-AFDSAEVLVLAGASTGVIKLWDLEE 89
L + D+ V +W + L G +S V+S LV G+ G +KLWD+ +
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 184
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
++T + AV F+ + SG +D ++K+WD+R+ +T +GH + +
Sbjct: 185 KAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 243
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTA-GKLLHDFKFHEGHIRSID-------FHPLEFLLAT 201
+ +G +++S DN V+VWD+ K +G++ + + + P +A
Sbjct: 244 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAA 303
Query: 202 GSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
GSADR V WD + ++ ++ + FHPD + S D ++Y E
Sbjct: 304 GSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDK-RLYMGE 356
Score = 194 (73.4 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 60/217 (27%), Positives = 95/217 (43%)
Query: 93 VRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIH--TYKGHTRGINTIRF 150
+ L+GH+ +FHP G AS D + +W++ C + T KGH+ + + +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHY 118
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEF---LLATGSADRT 207
DG + S D V VWD G+ + K H + S +P L+ TGS D T
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC--YPARRGPQLVCTGSDDGT 176
Query: 208 VKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSW-EPVICHDSVDM 265
VK WD+ I T V A+TF+ + SG D+++KV+ + + +
Sbjct: 177 VKLWDIRKKAAI-QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGH 235
Query: 266 GWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHVEP 302
S G ++G L + N+V +W DV P
Sbjct: 236 ADSVTGLSLSSEGSYLLSNAMDNTVRVW--DVRPFAP 270
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 295 (108.9 bits), Expect = 8.0e-25, P = 8.0e-25
Identities = 67/248 (27%), Positives = 119/248 (47%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H +++ + ++L + D+ + +W +L G + +A+ L+
Sbjct: 45 HLKSISSVKFSPDG-KWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLI 103
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
+ + IK+WD+E KMV+TL GHK V F+P SG D N++IWD+
Sbjct: 104 CSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGE 163
Query: 134 CIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEG-HIRSIDF 192
C H+ + + F DG VVSG +D V++WD T G+LL+ +G + + F
Sbjct: 164 CTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKF 223
Query: 193 HPL-EFLLATGSADRTVKFWD-------LETFELIGSTRPEVTGVHAITFHPDGRTLFSG 244
P +F+LA G+ D T++ W L+T+ + + + ++T G+ + +G
Sbjct: 224 SPNGKFVLA-GTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTC---GKWIVTG 279
Query: 245 FDDNLKVY 252
+DNL +Y
Sbjct: 280 SEDNL-IY 286
Score = 270 (100.1 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 62/205 (30%), Positives = 100/205 (48%)
Query: 53 SLCGLSSPVDSVAFDSAEVLVLAGASTG-VIKLWDLEESKMVRTLTGHKSNCTAVEFHPF 111
+L G + SV F S + LA AS IK+W + K RTL GHK + + +
Sbjct: 41 TLKGHLKSISSVKF-SPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQD 99
Query: 112 GEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDL 171
+ S D +KIWD+ + T KGH + + F P +VSG FD V++WD+
Sbjct: 100 SKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDV 159
Query: 172 TAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEV-TGVH 230
G+ H + + F+ L+ +GS D TV+ WD T +L+ + E V
Sbjct: 160 NTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVS 219
Query: 231 AITFHPDGRTLFSG-FDDNLKVYSW 254
+ F P+G+ + +G D+ L+++S+
Sbjct: 220 FVKFSPNGKFVLAGTLDNTLRLWSY 244
Score = 266 (98.7 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 57/215 (26%), Positives = 108/215 (50%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G ++ H V +S ++ +++G D+ V +W + + S PV V
Sbjct: 120 GKMVKTLKGHKEYVFGVSFNPQS-NLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGV 178
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTL-TGHKSNCTAVEFHPFGEFFASGCMDTN 123
F+ LV++G+ G +++WD +++ T+ T + V+F P G+F +G +D
Sbjct: 179 HFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNT 238
Query: 124 LKIWDIRK-KGCIHTYKGHTRG----INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLH 178
L++W K C+ TY GH +T T G+W+V+G DN++ +++L +++
Sbjct: 239 LRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTC-GKWIVTGSEDNLIYIYNLQTREIVQ 297
Query: 179 DFKFHEGHIRSIDFHPLEFLLATGSA--DRTVKFW 211
HE + ++ HP E ++A+G+ DR+VK W
Sbjct: 298 TLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
Score = 233 (87.1 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 52/195 (26%), Positives = 98/195 (50%)
Query: 136 HTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL 195
+T KGH + I++++F+PDG+W+ S D +K+W GK + H+ I I +
Sbjct: 40 YTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQD 99
Query: 196 EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSW 254
L+ + S D+T+K WD+E+ +++ + + V ++F+P + SG FD+N++++
Sbjct: 100 SKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDV 159
Query: 255 EPVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWVADVSHVEPYGVGAPEPDQS 313
C + + + N DG L+ Y +V IW D + + + E +
Sbjct: 160 NTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIW--DTTTGQLLNTISTEDGKE 217
Query: 314 ICTEVKFNPPGSHSL 328
+ + VKF+P G L
Sbjct: 218 V-SFVKFSPNGKFVL 231
Score = 222 (83.2 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 53/249 (21%), Positives = 115/249 (46%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H ++ I+ + + + + + DD+ + +W + + +L G V V+F+ L+
Sbjct: 87 HKEGISDIAWSQDS-KLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLI 145
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
++G+ +++WD+ + + ++ H T V F+ G SG D ++IWD
Sbjct: 146 VSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQ 205
Query: 134 CIHTYKGHT-RGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGK-LLHDFKFHEGHIRSID 191
++T + ++ ++F+P+G++V++G DN +++W K L + H+ I
Sbjct: 206 LLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCI- 264
Query: 192 FHPLEFL----LATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FD 246
F + TGS D + ++L+T E++ + V + HP + SG +
Sbjct: 265 FSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALE 324
Query: 247 DNLKVYSWE 255
+ V W+
Sbjct: 325 KDRSVKIWK 333
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 318 (117.0 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 61/207 (29%), Positives = 107/207 (51%)
Query: 9 QEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDS 68
++ + HS V +S ++L++ +D+ V LW++ TAL+S G + PV V F
Sbjct: 511 RKLIGHSGPVYGVSFSPDN-KYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSP 569
Query: 69 AEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWD 128
+ + +LW + +R GH ++ VEFHP + +G D ++WD
Sbjct: 570 LGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWD 629
Query: 129 IRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFH-EGHI 187
+ C+ + GHT +N + +PDGRW+ SGG D ++ VWD+ +G+ L + H +
Sbjct: 630 VHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASL 689
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLE 214
S+ F +L +G AD +V+ WD++
Sbjct: 690 YSLAFSRDGTVLVSGCADNSVRVWDVK 716
Score = 248 (92.4 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 75/271 (27%), Positives = 119/271 (43%)
Query: 64 VAFDSAEVLVLAGASTGVIKLWDLEESKM--------------VRTLTGHKSNCTAVEFH 109
+ F+ LV AG IKLW L+ + R L GH V F
Sbjct: 467 IEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSFS 526
Query: 110 PFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVW 169
P ++ S D +++W + + +YKGHT+ + ++F+P G + V+ D ++W
Sbjct: 527 PDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLW 586
Query: 170 DLTAGKLLHDFKFHEGHIRSID---FHPLEFLLATGSADRTVKFWDLETFELIGSTRPEV 226
A ++ + GHI +D FHP + TGS+D+T + WD+ T +
Sbjct: 587 ---ATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHT 643
Query: 227 TGVHAITFHPDGRTLFSGFDDNLKVYSWEPVICHDSVDM---GWSTLGDLCIN-DGKLL- 281
V+ + PDGR L SG +D + + W+ M ++L L + DG +L
Sbjct: 644 NSVNCLAVSPDGRWLASGGEDGI-ICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLV 702
Query: 282 -GCSFYRNSVGIWVADVSHVEPYGVGAPEPD 311
GC+ NSV +W DV G PEP+
Sbjct: 703 SGCA--DNSVRVW--DVKK-NTNDAG-PEPE 727
Score = 237 (88.5 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 63/262 (24%), Positives = 109/262 (41%)
Query: 11 FVAHSANVN--CISIGKKACRFLITGGDDQKVNLWAI-GKPTALM-------------SL 54
+ H+ N N CI + + G D + LW++ GKP + L
Sbjct: 455 YTFHNTNNNMTCIEFNDDST-LVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKL 513
Query: 55 CGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEF 114
G S PV V+F +L+ + ++LW L+ + + GH V+F P G +
Sbjct: 514 IGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHY 573
Query: 115 FASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAG 174
F + D ++W + + GH ++ + F P+ +V +G D ++WD+ G
Sbjct: 574 FVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTG 633
Query: 175 KLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEV-TGVHAIT 233
+ F H + + P LA+G D + WD+ + + S R ++++
Sbjct: 634 NCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLA 693
Query: 234 FHPDGRTLFSGFDDNLKVYSWE 255
F DG L SG DN V W+
Sbjct: 694 FSRDGTVLVSGCADN-SVRVWD 714
Score = 162 (62.1 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 29/127 (22%), Positives = 65/127 (51%)
Query: 6 YKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVA 65
Y L+ F H +V+C+ + ++ TG D+ +W + + G ++ V+ +A
Sbjct: 592 YPLRIFAGHINDVDCVEFHPNS-NYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLA 650
Query: 66 FDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGH-KSNCTAVEFHPFGEFFASGCMDTNL 124
+ +G G+I +WD+ + ++++ GH +++ ++ F G SGC D ++
Sbjct: 651 VSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADNSV 710
Query: 125 KIWDIRK 131
++WD++K
Sbjct: 711 RVWDVKK 717
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 294 (108.6 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 60/221 (27%), Positives = 115/221 (52%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
++ G +++ H++ VN ++ + + TG DD V LW I K A+ + + V
Sbjct: 139 SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQN-TYQV 197
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
+V F+ +++G IK+WDL ++K+ T+ GH + T + G + S MD
Sbjct: 198 LAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD 257
Query: 122 TNLKIWDIR----KKGCIHTYKGHTRGI--NTIR--FTPDGRWVVSGGFDNVVKVWDLTA 173
+++WD+R K+ C+ ++G+ N +R ++PDG + +G D V VWD T+
Sbjct: 258 NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS 317
Query: 174 GKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLE 214
++L+ H G I + FHP E ++ + S+D+ + +++
Sbjct: 318 RRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
Score = 241 (89.9 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 64/254 (25%), Positives = 111/254 (43%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAI-GKPTALMSLCGLSSPVDSVAFDSAEVL 72
H V C L + G D+ + LW + G +L G S V + +++ +
Sbjct: 66 HEGEVYCCKFHPNGST-LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKS---NCTAVEFHPFGEFFASGCMDTNLKIWDI 129
+ + ++ + +WD E + V+ L GH S +C P + +G D +K+WDI
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP--QLVCTGSDDGTVKLWDI 182
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
RKK + T++ +T + + F ++SGG DN +KVWDL KL + + H +
Sbjct: 183 RKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFE--------LIGSTRPEVTGVHAITFHPDGRTL 241
+ L + + D TV+ WD+ F G+ + ++ PDG +
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKI 301
Query: 242 FSGFDDNLKVYSWE 255
+G D VY W+
Sbjct: 302 AAGSADRF-VYVWD 314
Score = 235 (87.8 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 60/234 (25%), Positives = 107/234 (45%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV-AFDSAEVLVLAGASTGVIKLWDLEE 89
L + D+ V +W + L G +S V+S LV G+ G +KLWD+ +
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 184
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
V+T + AV F+ + SG +D ++K+WD+R+ +T +GH + +
Sbjct: 185 KAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 243
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTA-GKLLHDFKFHEGHIRSID-------FHPLEFLLAT 201
+ +G +++S DN V+VWD+ K +G++ + + + P +A
Sbjct: 244 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAA 303
Query: 202 GSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
GSADR V WD + ++ ++ + FHPD + S D ++Y E
Sbjct: 304 GSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDK-RLYMGE 356
Score = 193 (73.0 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 59/217 (27%), Positives = 95/217 (43%)
Query: 93 VRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIH--TYKGHTRGINTIRF 150
+ L+GH+ +FHP G AS D + +W++ C + T KGH+ + + +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHY 118
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEF---LLATGSADRT 207
DG + S D V VWD G+ + K H + S +P L+ TGS D T
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC--YPARRGPQLVCTGSDDGT 176
Query: 208 VKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSW-EPVICHDSVDM 265
VK WD+ + T V A+TF+ + SG D+++KV+ + + +
Sbjct: 177 VKLWDIRKKAAV-QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGH 235
Query: 266 GWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHVEP 302
S G ++G L + N+V +W DV P
Sbjct: 236 ADSVTGLSLSSEGSYLLSNAMDNTVRVW--DVRPFAP 270
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 294 (108.6 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 60/221 (27%), Positives = 114/221 (51%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
++ G +++ H++ VN ++ + + TG DD V LW I K A+ + + V
Sbjct: 165 SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQN-TYQV 223
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
+V F+ +++G IK+WDL ++K+ T+ GH + T + G + S MD
Sbjct: 224 LAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD 283
Query: 122 TNLKIWDIR----KKGCIHTYKGHTRGI--NTIR--FTPDGRWVVSGGFDNVVKVWDLTA 173
++IWD+R K+ C+ ++G+ N +R ++PDG + G D V VWD T+
Sbjct: 284 NTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTS 343
Query: 174 GKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLE 214
++L+ H G + + FHP E ++ + S+D+ + +++
Sbjct: 344 RRILYKLPGHAGSVNELAFHPEEPIILSASSDKRLYMGEIQ 384
Score = 238 (88.8 bits), Expect = 6.0e-17, P = 6.0e-17
Identities = 64/254 (25%), Positives = 110/254 (43%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAI-GKPTALMSLCGLSSPVDSVAFDSAEVL 72
H V C L + G D+ + LW + G +L G S V + +++ +
Sbjct: 92 HEGEVYCCKFHPWG-NTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 150
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKS---NCTAVEFHPFGEFFASGCMDTNLKIWDI 129
+ + ++ + +WD E + V+ L GH S +C P + +G D +K+WDI
Sbjct: 151 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP--QLVCTGSDDGTVKLWDI 208
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
RKK + T++ +T + + F ++SGG DN +KVWDL KL + + H +
Sbjct: 209 RKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 267
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFE--------LIGSTRPEVTGVHAITFHPDGRTL 241
+ L + + D TV+ WD+ F G+ + ++ PDG +
Sbjct: 268 LSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKI 327
Query: 242 FSGFDDNLKVYSWE 255
G D VY W+
Sbjct: 328 AGGSADRF-VYVWD 340
Score = 229 (85.7 bits), Expect = 6.5e-16, P = 6.5e-16
Identities = 59/234 (25%), Positives = 107/234 (45%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV-AFDSAEVLVLAGASTGVIKLWDLEE 89
L + D+ V +W + L G +S V+S LV G+ G +KLWD+ +
Sbjct: 151 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 210
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
V+T + AV F+ + SG +D ++K+WD+R+ +T +GH + +
Sbjct: 211 KAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 269
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTA-GKLLHDFKFHEGHIRSID-------FHPLEFLLAT 201
+ +G +++S DN V++WD+ K +G++ + + + P +A
Sbjct: 270 LSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAG 329
Query: 202 GSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
GSADR V WD + ++ V+ + FHP+ + S D ++Y E
Sbjct: 330 GSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSDK-RLYMGE 382
Score = 198 (74.8 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 60/217 (27%), Positives = 96/217 (44%)
Query: 93 VRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIH--TYKGHTRGINTIRF 150
+ L+GH+ +FHP+G AS D + +W++ C + T KGH+ + + +
Sbjct: 86 IMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHY 144
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEF---LLATGSADRT 207
DG + S D V VWD G+ + K H + S +P L+ TGS D T
Sbjct: 145 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC--YPARRGPQLVCTGSDDGT 202
Query: 208 VKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSW-EPVICHDSVDM 265
VK WD+ + T V A+TF+ + SG D+++KV+ + + +
Sbjct: 203 VKLWDIRKKAAV-QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGH 261
Query: 266 GWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHVEP 302
S G ++G L + N+V IW DV P
Sbjct: 262 ADSVTGLSLSSEGSYLLSNAMDNTVRIW--DVRPFAP 296
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 294 (108.6 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 62/244 (25%), Positives = 107/244 (43%)
Query: 9 QEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDS 68
+ F H V C+ + L +G D + +W + + G V V F
Sbjct: 13 RHFKGHRDAVTCVDFSLNT-KHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSP 71
Query: 69 AEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWD 128
+ L+ +G+ +++W H + +V F G+ + D +K+W
Sbjct: 72 SGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWS 131
Query: 129 IRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIR 188
++ + + H + +F+PDGR +VS D VK+WD T+ + +H + H G +
Sbjct: 132 THRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVT 191
Query: 189 SIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN 248
+DFHP +A D TVK WD T L+ + V+A++FHP G L + D+
Sbjct: 192 YVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDS 251
Query: 249 -LKV 251
LK+
Sbjct: 252 TLKI 255
Score = 291 (107.5 bits), Expect = 2.1e-24, P = 2.1e-24
Identities = 70/263 (26%), Positives = 112/263 (42%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
R Y+ F H V C++ L +G D+ V +W ++ V S
Sbjct: 53 RAYR---FTGHKDAVTCVNFSPSG-HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRS 108
Query: 64 VAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN 123
V F S L++ + +K+W + + +LT H + +F P G S D
Sbjct: 109 VHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKT 168
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
+K+WD + C+H+Y H + + F P G + + G DN VKVWD +L+ ++ H
Sbjct: 169 VKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLH 228
Query: 184 EGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS 243
+ ++ FHP L T S+D T+K DL L+ + + F G S
Sbjct: 229 SAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 288
Query: 244 GFDDNLKVYSWEPVICHDSVDMG 266
G D +V W+ D+VD G
Sbjct: 289 GGSDE-QVMVWKSNF--DTVDYG 308
Score = 234 (87.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 60/210 (28%), Positives = 92/210 (43%)
Query: 88 EESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINT 147
E+ + R GH+ T V+F + ASG MD+ L IW ++ + + + GH +
Sbjct: 7 EDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTC 66
Query: 148 IRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRT 207
+ F+P G + SG D V++W F+ H +RS+ F LL T S D+T
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKT 126
Query: 208 VKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVI--C-HDSVD 264
VK W + S + V F PDGR + S DD V W+ C H +
Sbjct: 127 VKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKT-VKLWDKTSRECVHSYCE 185
Query: 265 MG-WSTLGDLCINDGKLLGCSFYRNSVGIW 293
G + T D + G + + N+V +W
Sbjct: 186 HGGFVTYVDFHPS-GTCIAAAGMDNTVKVW 214
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 308 (113.5 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 72/253 (28%), Positives = 123/253 (48%)
Query: 6 YKLQEFV-AHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
+KL + H V C++I + ITG +D + +W + +L G V V
Sbjct: 129 WKLSRVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDV 188
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
A + + + +K WDLE+++++R GH S V HP + A+ D+ +
Sbjct: 189 AVSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVI 248
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
K+WD+R + + T GH IN ++ TP VVS D V++WD+ AGK + H+
Sbjct: 249 KLWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTMKVLTHHK 308
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGV-HAITFHPDGRTLFS 243
+R+ HP EF +A+ D ++ W L L+ + E TG+ + ++ + D LF+
Sbjct: 309 RSVRATALHPKEFSVASACTD-DIRSWGLAEGSLLTNFESEKTGIINTLSINQDD-VLFA 366
Query: 244 GFDDN-LKVYSWE 255
G D+ L Y ++
Sbjct: 367 GGDNGVLSFYDYK 379
Score = 203 (76.5 bits), Expect = 9.3e-13, P = 9.3e-13
Identities = 54/214 (25%), Positives = 99/214 (46%)
Query: 8 LQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFD 67
++++ H + V +SI + T G D + LW + +++L G P++ V
Sbjct: 217 IRDYYGHLSGVRTVSI-HPTLDLIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQCT 275
Query: 68 SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEF-FASGCMDTNLKI 126
+ V++ ++ ++LWD+ K ++ LT HK + A HP EF AS C D +++
Sbjct: 276 PVDPQVVSSSTDATVRLWDVVAGKTMKVLTHHKRSVRATALHP-KEFSVASACTD-DIRS 333
Query: 127 WDIRKKGCIHTYKGHTRGI-NTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE- 184
W + + + ++ GI NT+ D + +GG + V+ +D +G E
Sbjct: 334 WGLAEGSLLTNFESEKTGIINTLSINQDDV-LFAGGDNGVLSFYDYKSGHKYQSLATREM 392
Query: 185 -GHI---RSI---DFHPLEFLLATGSADRTVKFW 211
G + RS+ F L TG AD+++K W
Sbjct: 393 VGSLEGERSVLCSTFDKTGLRLITGEADKSIKIW 426
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 312 (114.9 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 75/248 (30%), Positives = 123/248 (49%)
Query: 60 PVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGC 119
P +V+ D +V + + A+ G +KLW L+ + V + GH V +HP G F + C
Sbjct: 282 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTC 341
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
D + ++WD+ + I +GH+ G+ I F DG +GG D +VWDL G+ +
Sbjct: 342 YDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCI-- 399
Query: 180 FKFHEGHIRSI---DFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHP 236
F EGH++ I +F P + +ATGS D T K WDL + + V + F P
Sbjct: 400 -MFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEP 458
Query: 237 -DGRTLFSG-FDDNLKVYS---WEPVIC---HDSVDMGWSTLGDLCINDGKLLGCSFYRN 288
G L +G +D+ K+++ W P+ H+ MG D+ +DG+L+ Y
Sbjct: 459 IHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL----DIS-SDGQLIATCSYDR 513
Query: 289 SVGIWVAD 296
+ +W+A+
Sbjct: 514 TFKLWMAE 521
Score = 232 (86.7 bits), Expect = 8.8e-16, P = 8.8e-16
Identities = 60/238 (25%), Positives = 105/238 (44%)
Query: 21 ISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTG 80
+S+ +K L + D V LW++ + + G + V V + + +
Sbjct: 286 VSLDQKDVN-LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDR 344
Query: 81 VIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKG 140
+LWDLE + + GH + FH G +G +D ++WD+R CI +G
Sbjct: 345 SWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEG 404
Query: 141 HTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLE--FL 198
H + I I F+P+G + +G DN KVWDL + ++ H+ + + F P+ FL
Sbjct: 405 HLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFL 464
Query: 199 LATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS-GFDDNLKVYSWE 255
L TG+ D T K W + + + V + DG+ + + +D K++ E
Sbjct: 465 L-TGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 521
Score = 222 (83.2 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 64/253 (25%), Positives = 108/253 (42%)
Query: 53 SLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFG 112
S G P+ F ++ +G+ KLW + + ++ TL GH +N A+ FHP
Sbjct: 225 SQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKS 284
Query: 113 EF--------FASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDN 164
AS D ++K+W + + +GHT + + + P GR++ + +D
Sbjct: 285 TVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDR 344
Query: 165 VVKVWDLTAGK-LLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTR 223
++WDL A + +LH + H + I FH L TG D + WDL T I
Sbjct: 345 SWRLWDLEAQEEILHQ-EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLE 403
Query: 224 PEVTGVHAITFHPDGRTLFSGFDDNL-KVYSWEPVICHDSVDMGWSTLGDLCIND--GKL 280
+ ++ I F P+G + +G DN KV+ C ++ + + + G
Sbjct: 404 GHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNF 463
Query: 281 LGCSFYRNSVGIW 293
L Y N+ IW
Sbjct: 464 LLTGAYDNTAKIW 476
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 293 (108.2 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 60/220 (27%), Positives = 110/220 (50%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSP--VD 62
G + + F H VN + ++ + L +G DD+ + +W K A +L SP V
Sbjct: 130 GQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTL---ESPFQVT 186
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
+V F V++G +K+WD+ + ++ L GH T + P G+F + MD
Sbjct: 187 AVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDN 246
Query: 123 NLKIWDIRK----KGCIHTYKGHTRGI--NTIR--FTPDGRWVVSGGFDNVVKVWDLTAG 174
L++WD+R + C+ ++GH N +R ++P + SG D V +WD+
Sbjct: 247 TLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTR 306
Query: 175 KLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLE 214
++L+ H G + ++DF P E L+ +GS+D+T+ +++
Sbjct: 307 RILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGEID 346
Score = 237 (88.5 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 65/227 (28%), Positives = 104/227 (45%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDS-AEVLVLAGASTGVIKLWDLEE 89
+ T D+ + W I G + V+SV + L+ +G+ IK+WD +
Sbjct: 113 IFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARK 172
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
TL TAV F GE SG +D +KIWDIRK+ +H +GH+ I +
Sbjct: 173 KHAAHTLES-PFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMS 231
Query: 150 FTPDGRWVVSGGFDNVVKVWDL---TAG----KLL--HDFKFHEGHIRSIDFHPLEFLLA 200
+P+G ++++ DN ++VWD+ G K+ H F + +R + P +
Sbjct: 232 LSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCA-WSPGSDKIT 290
Query: 201 TGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD 247
+GSADR V WD+ T ++ V+A+ F P + SG D
Sbjct: 291 SGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSD 337
Score = 229 (85.7 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 52/190 (27%), Positives = 90/190 (47%)
Query: 31 LITGGDDQKVNLWAIGKPTA-LMSLCGLSSPVDSVAF--DSAEVLVLAGASTGVIKLWDL 87
L++ G D+++ +W + + +M++ G S V F D + + + T + WD+
Sbjct: 70 LLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKT--LAFWDI 127
Query: 88 EESKMVRTLTGHKSNCTAVEFHPFGE-FFASGCMDTNLKIWDIRKKGCIHTYKGHTRGIN 146
+ R GH + +V+ G+ SG D +KIWD RKK HT + + +
Sbjct: 128 ATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQ-VT 186
Query: 147 TIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADR 206
+ F G V+SGG DN VK+WD+ +LH + H I + P + T + D
Sbjct: 187 AVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDN 246
Query: 207 TVKFWDLETF 216
T++ WD+ +
Sbjct: 247 TLRVWDVRPY 256
Score = 171 (65.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 47/209 (22%), Positives = 87/209 (41%)
Query: 51 LMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDL-EESKMVRTLTGHKSNCTAVEFH 109
+M L G + + F L+L+ I +W + E+ + V ++GH F
Sbjct: 48 IMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFT 107
Query: 110 PFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVV-SGGFDNVVKV 168
P G + D L WDI +KGH +N+++ + G+ ++ SG D +K+
Sbjct: 108 PDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKI 167
Query: 169 WDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTG 228
WD H + + ++ F + +G D VK WD+ ++ R
Sbjct: 168 WDARKKHAAHTLE-SPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDT 226
Query: 229 VHAITFHPDGR-TLFSGFDDNLKVYSWEP 256
+ ++ P+G L + D+ L+V+ P
Sbjct: 227 ITGMSLSPEGDFILTNAMDNTLRVWDVRP 255
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 292 (107.8 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 65/245 (26%), Positives = 113/245 (46%)
Query: 9 QEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDS 68
+ F H V C+ + L +G D + +W + + G V V F
Sbjct: 44 RHFKGHRDAVTCVDFSFNM-KQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP 102
Query: 69 AEVLVLAGASTGVIKLWDLEESKMVRTL-TGHKSNCTAVEFHPFGEFFASGCMDTNLKIW 127
+ L+ +G+ +++W + K T+ H + +V F G+ F + D +K+W
Sbjct: 103 SGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVW 161
Query: 128 DIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHI 187
++ + + H + +F+PDGR +VS D VK+WD T+ + +H + H G +
Sbjct: 162 STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 221
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD 247
+DFHP +A D TVK WD+ T L+ + V+A++FHP G L + D
Sbjct: 222 TYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSD 281
Query: 248 N-LKV 251
+ LK+
Sbjct: 282 STLKI 286
Score = 285 (105.4 bits), Expect = 9.3e-24, P = 9.3e-24
Identities = 71/263 (26%), Positives = 110/263 (41%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
R Y+ F H V C++ L +G D+ V +W ++ V S
Sbjct: 84 RAYR---FTGHKDAVTCVNFSPSG-HLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRS 139
Query: 64 VAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN 123
V F S + + IK+W K + +L+ H + +F P G S D
Sbjct: 140 VHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKT 199
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
+K+WD + C+H+Y H + + F P G V + G DN VKVWD+ +LL ++ H
Sbjct: 200 VKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLH 259
Query: 184 EGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS 243
+ ++ FHP L T S+D T+K DL L+ + + F G S
Sbjct: 260 SAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 319
Query: 244 GFDDNLKVYSWEPVICHDSVDMG 266
G D +V W+ D +D G
Sbjct: 320 GGSDE-QVMVWKSNF--DVIDYG 339
Score = 214 (80.4 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 56/210 (26%), Positives = 91/210 (43%)
Query: 88 EESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINT 147
E+ + R GH+ T V+F + ASG MD+ L +W ++ + + + GH +
Sbjct: 38 EDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 97
Query: 148 IRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRT 207
+ F+P G + SG D V++W F+ H +RS+ F T S D+T
Sbjct: 98 VNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 157
Query: 208 VKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVI--C-HDSVD 264
+K W + + S + V F PDGR + S DD V W+ C H +
Sbjct: 158 IKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKT-VKLWDKTSRECVHSYCE 216
Query: 265 MG-WSTLGDLCINDGKLLGCSFYRNSVGIW 293
G + T D + G + + N+V +W
Sbjct: 217 HGGFVTYVDFHPS-GTCVAAAGMDNTVKVW 245
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 311 (114.5 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 75/248 (30%), Positives = 123/248 (49%)
Query: 60 PVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGC 119
P +V+ D +V + + A+ G +KLW L+ + V + GH V +HP G F + C
Sbjct: 298 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTC 357
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
D + ++WD+ + I +GH+ G+ I F DG +GG D +VWDL G+ +
Sbjct: 358 YDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCI-- 415
Query: 180 FKFHEGHIRSI---DFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHP 236
F EGH++ I +F P + +ATGS D T K WDL + + V + F P
Sbjct: 416 -MFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEP 474
Query: 237 -DGRTLFSG-FDDNLKVYS---WEPVIC---HDSVDMGWSTLGDLCINDGKLLGCSFYRN 288
G L +G +D+ K+++ W P+ H+ MG D+ +DG+L+ Y
Sbjct: 475 IHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL----DIS-SDGQLIATCSYDR 529
Query: 289 SVGIWVAD 296
+ +W+A+
Sbjct: 530 TFKLWMAE 537
Score = 231 (86.4 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 60/238 (25%), Positives = 105/238 (44%)
Query: 21 ISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTG 80
+S+ +K L + D V LW++ + + G + V V + + +
Sbjct: 302 VSLDQKDVN-LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDR 360
Query: 81 VIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKG 140
+LWDLE + + GH + FH G +G +D ++WD+R CI +G
Sbjct: 361 SWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEG 420
Query: 141 HTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLE--FL 198
H + I I F+P+G + +G DN KVWDL + ++ H+ + + F P+ FL
Sbjct: 421 HLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFL 480
Query: 199 LATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS-GFDDNLKVYSWE 255
L TG+ D T K W + + + V + DG+ + + +D K++ E
Sbjct: 481 L-TGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 537
Score = 222 (83.2 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 64/253 (25%), Positives = 108/253 (42%)
Query: 53 SLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFG 112
S G P+ F ++ +G+ KLW + + ++ TL GH +N A+ FHP
Sbjct: 241 SQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKS 300
Query: 113 EF--------FASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDN 164
AS D ++K+W + + +GHT + + + P GR++ + +D
Sbjct: 301 TVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDR 360
Query: 165 VVKVWDLTAGK-LLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTR 223
++WDL A + +LH + H + I FH L TG D + WDL T I
Sbjct: 361 SWRLWDLEAQEEILHQ-EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLE 419
Query: 224 PEVTGVHAITFHPDGRTLFSGFDDNL-KVYSWEPVICHDSVDMGWSTLGDLCIND--GKL 280
+ ++ I F P+G + +G DN KV+ C ++ + + + G
Sbjct: 420 GHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNF 479
Query: 281 LGCSFYRNSVGIW 293
L Y N+ IW
Sbjct: 480 LLTGAYDNTAKIW 492
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 311 (114.5 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 75/248 (30%), Positives = 123/248 (49%)
Query: 60 PVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGC 119
P +V+ D +V + + A+ G +KLW L+ + V + GH V +HP G F + C
Sbjct: 300 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTC 359
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
D + ++WD+ + I +GH+ G+ I F DG +GG D +VWDL G+ +
Sbjct: 360 YDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCI-- 417
Query: 180 FKFHEGHIRSI---DFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHP 236
F EGH++ I +F P + +ATGS D T K WDL + + V + F P
Sbjct: 418 -MFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEP 476
Query: 237 -DGRTLFSG-FDDNLKVYS---WEPVIC---HDSVDMGWSTLGDLCINDGKLLGCSFYRN 288
G L +G +D+ K+++ W P+ H+ MG D+ +DG+L+ Y
Sbjct: 477 IHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL----DIS-SDGQLIATCSYDR 531
Query: 289 SVGIWVAD 296
+ +W+A+
Sbjct: 532 TFKLWMAE 539
Score = 231 (86.4 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 60/238 (25%), Positives = 105/238 (44%)
Query: 21 ISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTG 80
+S+ +K L + D V LW++ + + G + V V + + +
Sbjct: 304 VSLDQKDVN-LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDR 362
Query: 81 VIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKG 140
+LWDLE + + GH + FH G +G +D ++WD+R CI +G
Sbjct: 363 SWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEG 422
Query: 141 HTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLE--FL 198
H + I I F+P+G + +G DN KVWDL + ++ H+ + + F P+ FL
Sbjct: 423 HLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFL 482
Query: 199 LATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS-GFDDNLKVYSWE 255
L TG+ D T K W + + + V + DG+ + + +D K++ E
Sbjct: 483 L-TGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 539
Score = 222 (83.2 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 64/253 (25%), Positives = 108/253 (42%)
Query: 53 SLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFG 112
S G P+ F ++ +G+ KLW + + ++ TL GH +N A+ FHP
Sbjct: 243 SQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKS 302
Query: 113 EF--------FASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDN 164
AS D ++K+W + + +GHT + + + P GR++ + +D
Sbjct: 303 TVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDR 362
Query: 165 VVKVWDLTAGK-LLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTR 223
++WDL A + +LH + H + I FH L TG D + WDL T I
Sbjct: 363 SWRLWDLEAQEEILHQ-EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLE 421
Query: 224 PEVTGVHAITFHPDGRTLFSGFDDNL-KVYSWEPVICHDSVDMGWSTLGDLCIND--GKL 280
+ ++ I F P+G + +G DN KV+ C ++ + + + G
Sbjct: 422 GHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNF 481
Query: 281 LGCSFYRNSVGIW 293
L Y N+ IW
Sbjct: 482 LLTGAYDNTAKIW 494
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 310 (114.2 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 75/248 (30%), Positives = 123/248 (49%)
Query: 60 PVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGC 119
P +V+ D +V + + A+ G +KLW L+ + V + GH V +HP G F + C
Sbjct: 283 PKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTC 342
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
D + ++WD+ + I +GH+ G+ I F DG +GG D +VWDL G+ +
Sbjct: 343 YDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCI-- 400
Query: 180 FKFHEGHIRSI---DFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHP 236
F EGH++ I +F P + +ATGS D T K WDL + + V + F P
Sbjct: 401 -MFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEP 459
Query: 237 -DGRTLFSG-FDDNLKVYS---WEPVIC---HDSVDMGWSTLGDLCINDGKLLGCSFYRN 288
G L +G +D+ K+++ W P+ H+ MG D+ +DG+L+ Y
Sbjct: 460 IHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL----DIS-SDGQLIATCSYDR 514
Query: 289 SVGIWVAD 296
+ +W+A+
Sbjct: 515 TFKLWMAE 522
Score = 252 (93.8 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 56/187 (29%), Positives = 85/187 (45%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
RFL T D+ LW + ++ G S V +AF L G ++WDL
Sbjct: 336 RFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLR 395
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ + L GH + F P G A+G D K+WD+R++ C++T H + +
Sbjct: 396 TGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGV 455
Query: 149 RFTP-DGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRT 207
+F P G ++++G +DN K+W L HEG + +D L+AT S DRT
Sbjct: 456 KFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRT 515
Query: 208 VKFWDLE 214
K W E
Sbjct: 516 FKLWMAE 522
Score = 230 (86.0 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 57/222 (25%), Positives = 98/222 (44%)
Query: 37 DQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTL 96
D V LW++ + + G + V V + + + +LWDLE + +
Sbjct: 302 DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ 361
Query: 97 TGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRW 156
GH + FH G +G +D ++WD+R CI +GH + I I F+P+G
Sbjct: 362 EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH 421
Query: 157 VVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLE--FLLATGSADRTVKFWDLE 214
+ +G DN KVWDL + ++ H+ + + F P+ FLL TG+ D T K W
Sbjct: 422 IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLL-TGAYDNTAKIWTHP 480
Query: 215 TFELIGSTRPEVTGVHAITFHPDGRTLFS-GFDDNLKVYSWE 255
+ + + V + DG+ + + +D K++ E
Sbjct: 481 GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 522
Score = 222 (83.2 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 64/253 (25%), Positives = 108/253 (42%)
Query: 53 SLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFG 112
S G P+ F ++ +G+ KLW + + ++ TL GH +N A+ FHP
Sbjct: 226 SQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKS 285
Query: 113 EF--------FASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDN 164
AS D ++K+W + + +GHT + + + P GR++ + +D
Sbjct: 286 TVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDR 345
Query: 165 VVKVWDLTAGK-LLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTR 223
++WDL A + +LH + H + I FH L TG D + WDL T I
Sbjct: 346 SWRLWDLEAQEEILHQ-EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLE 404
Query: 224 PEVTGVHAITFHPDGRTLFSGFDDNL-KVYSWEPVICHDSVDMGWSTLGDLCIND--GKL 280
+ ++ I F P+G + +G DN KV+ C ++ + + + G
Sbjct: 405 GHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNF 464
Query: 281 LGCSFYRNSVGIW 293
L Y N+ IW
Sbjct: 465 LLTGAYDNTAKIW 477
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 309 (113.8 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 75/248 (30%), Positives = 123/248 (49%)
Query: 60 PVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGC 119
P +V+ D +V + + A+ G +KLW L+ + V + GH V +HP G F + C
Sbjct: 282 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTC 341
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
D + ++WD+ + I +GH+ G+ I F DG +GG D +VWDL G+ +
Sbjct: 342 YDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCI-- 399
Query: 180 FKFHEGHIRSI---DFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHP 236
F EGH++ I +F P + +ATGS D T K WDL + + V + F P
Sbjct: 400 -MFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEP 458
Query: 237 -DGRTLFSG-FDDNLKVYS---WEPVIC---HDSVDMGWSTLGDLCINDGKLLGCSFYRN 288
G L +G +D+ K+++ W P+ H+ MG D+ +DG+L+ Y
Sbjct: 459 IHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL----DIS-SDGQLIATCSYDR 513
Query: 289 SVGIWVAD 296
+ +W+A+
Sbjct: 514 TFKLWMAE 521
Score = 233 (87.1 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 60/238 (25%), Positives = 106/238 (44%)
Query: 21 ISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTG 80
+S+ +K L + D V LW++ + + G + V V + + +
Sbjct: 286 VSLDQKDVN-LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDR 344
Query: 81 VIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKG 140
+LWDLE + + GH + FH G +G +D ++WD+R CI +G
Sbjct: 345 SWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEG 404
Query: 141 HTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL--EFL 198
H + I I F+P+G + +G DN KVWDL + ++ H+ + + F P+ +FL
Sbjct: 405 HLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFL 464
Query: 199 LATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS-GFDDNLKVYSWE 255
L TG+ D T K W + + + V + DG+ + + +D K++ E
Sbjct: 465 L-TGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 521
Score = 221 (82.9 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 64/253 (25%), Positives = 108/253 (42%)
Query: 53 SLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFG 112
S G P+ F ++ +G+ KLW + + ++ TL GH +N A+ FHP
Sbjct: 225 SQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKS 284
Query: 113 EF--------FASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDN 164
AS D ++K+W + + +GHT + + + P GR++ + +D
Sbjct: 285 TVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDR 344
Query: 165 VVKVWDLTAGK-LLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTR 223
++WDL A + +LH + H + I FH L TG D + WDL T I
Sbjct: 345 SWRLWDLEAQEEILHQ-EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLE 403
Query: 224 PEVTGVHAITFHPDGRTLFSGFDDNL-KVYSWEPVICHDSVDMGWSTLGDLCIND--GKL 280
+ ++ I F P+G + +G DN KV+ C ++ + + + G
Sbjct: 404 GHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDF 463
Query: 281 LGCSFYRNSVGIW 293
L Y N+ IW
Sbjct: 464 LLTGAYDNTAKIW 476
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 308 (113.5 bits), Expect = 3.4e-24, P = 3.4e-24
Identities = 75/248 (30%), Positives = 122/248 (49%)
Query: 60 PVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGC 119
P +V+ D +V + + A+ G +KLW L+ + V + GH V +HP G F + C
Sbjct: 282 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTC 341
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
D + ++WD+ + I +GH+ G+ I F DG +GG D +VWDL G+ +
Sbjct: 342 YDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCI-- 399
Query: 180 FKFHEGHIRSI---DFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHP 236
F EGH++ I F P + +ATGS D T K WDL + + V + F P
Sbjct: 400 -MFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEP 458
Query: 237 -DGRTLFSG-FDDNLKVYS---WEPVIC---HDSVDMGWSTLGDLCINDGKLLGCSFYRN 288
G L +G +D+ K+++ W P+ H+ MG D+ +DG+L+ Y
Sbjct: 459 IHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL----DIS-SDGQLIATCSYDR 513
Query: 289 SVGIWVAD 296
+ +W+A+
Sbjct: 514 TFKLWMAE 521
Score = 232 (86.7 bits), Expect = 8.8e-16, P = 8.8e-16
Identities = 60/238 (25%), Positives = 106/238 (44%)
Query: 21 ISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTG 80
+S+ +K L + D V LW++ + + G + V V + + +
Sbjct: 286 VSLDQKDVN-LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDR 344
Query: 81 VIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKG 140
+LWDLE + + GH + FH G +G +D ++WD+R CI +G
Sbjct: 345 SWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEG 404
Query: 141 HTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL--EFL 198
H + I I F+P+G + +G DN KVWDL + ++ H+ + + F P+ +FL
Sbjct: 405 HLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFL 464
Query: 199 LATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS-GFDDNLKVYSWE 255
L TG+ D T K W + + + V + DG+ + + +D K++ E
Sbjct: 465 L-TGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 521
Score = 222 (83.2 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 64/253 (25%), Positives = 109/253 (43%)
Query: 53 SLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFG 112
S G P+ F ++ +G+ KLW + + ++ TL GH +N A+ FHP
Sbjct: 225 SQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKS 284
Query: 113 EF--------FASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDN 164
AS D ++K+W + + +GHT + + + P GR++ + +D
Sbjct: 285 TVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDR 344
Query: 165 VVKVWDLTAGK-LLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTR 223
++WDL A + +LH + H + I FH L TG D + WDL T I
Sbjct: 345 SWRLWDLEAQEEILHQ-EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLE 403
Query: 224 PEVTGVHAITFHPDGRTLFSGFDDNL-KVYSWEPVICHDSVDMGWSTLGDLCIND--GKL 280
+ ++ I+F P+G + +G DN KV+ C ++ + + + G
Sbjct: 404 GHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDF 463
Query: 281 LGCSFYRNSVGIW 293
L Y N+ IW
Sbjct: 464 LLTGAYDNTAKIW 476
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 305 (112.4 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 73/257 (28%), Positives = 113/257 (43%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
R Y+ +V H V + + L + D+ V LW + + ++PV S
Sbjct: 52 RAYR---YVGHKDVVTSLQFSPQG-NLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRS 107
Query: 64 VAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN 123
V F + L++ + IK+W + + + +L H +F P G S D
Sbjct: 108 VDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
+KIWD K C++ + N + F P+G + S G D+ VK+WD+ KLL ++ H
Sbjct: 168 IKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVH 227
Query: 184 EGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS 243
+ + FHPL L T S+D TVK DL LI + + V ++F DG L S
Sbjct: 228 SCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTS 287
Query: 244 GFDDNLKVYSWEPVICH 260
G D +V W H
Sbjct: 288 GGAD-AQVLIWRTNFIH 303
Score = 277 (102.6 bits), Expect = 9.5e-21, Sum P(2) = 9.5e-21
Identities = 64/241 (26%), Positives = 115/241 (47%)
Query: 9 QEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTA-LMSLCGLSSPVDSVAFD 67
+ F H A + C+ + T D + LW++ KP A G V S+ F
Sbjct: 12 RSFKGHKAAITSADFSPN-CKQIATASWDTFLMLWSL-KPHARAYRYVGHKDVVTSLQF- 68
Query: 68 SAEVLVLAGASTG-VIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKI 126
S + +LA AS ++LW L+ H + +V+F G+ + D ++K+
Sbjct: 69 SPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKV 128
Query: 127 WDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGH 186
W + ++ +++ HT + +F+PDGR +VS D +K+WD T + +++F G
Sbjct: 129 WSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 187 IRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFD 246
+DF+P +A+ +D VK WD+ +L+ + GV+ ++FHP G +L +
Sbjct: 189 ANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASS 248
Query: 247 D 247
D
Sbjct: 249 D 249
Score = 240 (89.5 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 56/207 (27%), Positives = 97/207 (46%)
Query: 48 PTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGV-IKLWDLEESKMVRTLTGHKSNCTAV 106
P S G + + S F S +A AS + LW L+ GHK T++
Sbjct: 8 PILERSFKGHKAAITSADF-SPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSL 66
Query: 107 EFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVV 166
+F P G AS D +++W + +KG +K HT + ++ F+ DG+ +V+ D +
Sbjct: 67 QFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSI 126
Query: 167 KVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEV 226
KVW + + L+ H +R F P L+ + S D+T+K WD + + + V
Sbjct: 127 KVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSV 186
Query: 227 TGVHAITFHPDGRTLFS-GFDDNLKVY 252
+ + F+P+G + S G D +K++
Sbjct: 187 GFANFVDFNPNGTCIASAGSDHAVKIW 213
Score = 234 (87.4 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 58/210 (27%), Positives = 99/210 (47%)
Query: 87 LEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGIN 146
LE+ + R+ GHK+ T+ +F P + A+ DT L +W ++ + Y GH +
Sbjct: 5 LEDPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVT 64
Query: 147 TIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADR 206
+++F+P G + S D V++W L +FK H +RS+DF LL T S D+
Sbjct: 65 SLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDK 124
Query: 207 TVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN-LKVYSWEPVICHD--SV 263
++K W + + S V F PDGR + S +D +K++ C + S
Sbjct: 125 SIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD 184
Query: 264 DMGWSTLGDLCINDGKLLGCSFYRNSVGIW 293
+G++ D N G + + ++V IW
Sbjct: 185 SVGFANFVDFNPN-GTCIASAGSDHAVKIW 213
Score = 44 (20.5 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 17/78 (21%), Positives = 35/78 (44%)
Query: 586 PQTRLSRNEDQAA----DVTPQTTLSSNEDHVANVTSQTRLNGNEYQAATAPQQTRLSSN 641
P+ L R +A+ D+ P++ S+ED + + + Q+++ P LS +
Sbjct: 309 PKRNLKRLHFEASPHLLDIYPRSP-HSHEDRKETIEINPKREVMDLQSSSPPVVDVLSFD 367
Query: 642 IDPVANVTPQTLPSGNED 659
+ + T + +P ED
Sbjct: 368 STTMTDSTYRAVPGKGED 385
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 290 (107.1 bits), Expect = 4.0e-24, Sum P(2) = 4.0e-24
Identities = 77/252 (30%), Positives = 108/252 (42%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
R Y+ +V H V + L + D+ V LW K ++PV S
Sbjct: 10 RAYR---YVGHKDVVTSVQFSPHG-NLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRS 65
Query: 64 VAFDSAEVLVLAGASTGV-IKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
V F SA+ LA AS IK+W + + + +L H +F P G S D
Sbjct: 66 VDF-SADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 124
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
+KIWD K C++ + N + F P G + S G D VKVWD+ KLL ++
Sbjct: 125 TIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQV 184
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLF 242
H G + I FHP L T S+D T+K DL LI + + V ++F G
Sbjct: 185 HSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFA 244
Query: 243 SGFDDNLKVYSW 254
SG D +V W
Sbjct: 245 SGGADT-QVLLW 255
Score = 284 (105.0 bits), Expect = 2.5e-23, Sum P(2) = 2.5e-23
Identities = 66/230 (28%), Positives = 110/230 (47%)
Query: 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
KRG K EF AH+A V + +FL T +D+ + +W++ + L SL + V
Sbjct: 49 KRG-KFSEFKAHTAPVRSVDFSADG-QFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVR 106
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
F L+++ + IK+WD + V + V+F+P G AS D
Sbjct: 107 CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQ 166
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
+K+WD+R + Y+ H+ G+N I F P G ++++ D +K+ DL G+L++ +
Sbjct: 167 TVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG 226
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELI--GSTRPEVTGVH 230
H G + ++ F L A+G AD V W EL G T+ + +H
Sbjct: 227 HTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELHCKGLTKRNLKRLH 276
Score = 273 (101.2 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 60/212 (28%), Positives = 105/212 (49%)
Query: 42 LWAIGKPTA-LMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHK 100
LW KP A G V SV F L+ + + ++LW ++ H
Sbjct: 2 LWNF-KPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHT 60
Query: 101 SNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSG 160
+ +V+F G+F A+ D ++K+W + ++ +++ HT + +F+PDGR +VS
Sbjct: 61 APVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSC 120
Query: 161 GFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIG 220
D +K+WD T + +++F G +DF+P +A+ +D+TVK WD+ +L+
Sbjct: 121 SEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQ 180
Query: 221 STRPEVTGVHAITFHPDGRTLFSGFDDN-LKV 251
+ GV+ I+FHP G L + D LK+
Sbjct: 181 HYQVHSGGVNCISFHPSGNYLITASSDGTLKI 212
Score = 56 (24.8 bits), Expect = 4.0e-24, Sum P(2) = 4.0e-24
Identities = 20/88 (22%), Positives = 40/88 (45%)
Query: 599 DVTPQTTLSSNEDHVANVTSQTRLNGNEYQAATAPQQTRLSSNIDPVANVTPQTLPSGNE 658
D+ P+T +E+ V V +L + Q +T P LS + + +TLP E
Sbjct: 285 DIYPRTP-HPHEEKVETVEINPKLEVIDLQISTPPVMDILSFDSTTTTETSGRTLPDKGE 343
Query: 659 DQAA---N---VTPQTRPSSNEDQTANV 680
+ N ++P+ P++ + +T ++
Sbjct: 344 EACGYFLNPSLMSPECLPTTTKKKTEDM 371
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 309 (113.8 bits), Expect = 4.0e-24, P = 4.0e-24
Identities = 82/252 (32%), Positives = 120/252 (47%)
Query: 8 LQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFD 67
LQ H A V +S + R L + DD+ V +W + +L G S V SV F
Sbjct: 289 LQALEGHEAAVLSVSYSHDS-RLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIF- 346
Query: 68 SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIW 127
S + +LA AS +K+WD + TL GH+ +V F + AS D+ +KIW
Sbjct: 347 SHDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIW 406
Query: 128 DIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHI 187
D HT +GH + ++ F+ D + + S D+ VK+WD G L H + H +
Sbjct: 407 DTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWV 466
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTG----VHAITFHPDGRTLFS 243
RS+ F LLA+ S DRTV+ WD E GS + + G V +++F D R L S
Sbjct: 467 RSVIFSHDSRLLASASDDRTVRIWDTEK----GSHKHTLEGHSSLVTSVSFSHDSRLLAS 522
Query: 244 GFDDNLKVYSWE 255
+D V W+
Sbjct: 523 ASNDQT-VRIWD 533
Score = 256 (95.2 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 56/188 (29%), Positives = 86/188 (45%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L+ D V +W G + +L G V SV F L+ + + +K+WD
Sbjct: 352 LLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTG 411
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ TL GH+ +V F + AS D+ +KIWD HT +GH + ++ F
Sbjct: 412 SLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIF 471
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
+ D R + S D V++WD G H + H + S+ F LLA+ S D+TV+
Sbjct: 472 SHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRI 531
Query: 211 WDLETFEL 218
WD+E L
Sbjct: 532 WDIEARSL 539
Score = 224 (83.9 bits), Expect = 8.3e-15, P = 8.3e-15
Identities = 66/236 (27%), Positives = 105/236 (44%)
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
S ++ L GH++ +V + AS D +KIWD HT +GH+ + ++
Sbjct: 286 SPCLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVI 345
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
F+ D R + S D+ VK+WD G L H + H +RS+ F LLA+ S D TVK
Sbjct: 346 FSHDSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVK 404
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN-LKVYSWEPVICHDSVD--MG 266
WD T L + V ++ F D + L S DD+ +K++ +++
Sbjct: 405 IWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRD 464
Query: 267 WSTLGDLCINDGKLLGCSFYRNSVGIWVADV-SHVEPYGVGAPEPDQSICTEVKFN 321
W + +D +LL + +V IW + SH E S+ T V F+
Sbjct: 465 W-VRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTL-----EGHSSLVTSVSFS 514
Score = 210 (79.0 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 45/152 (29%), Positives = 70/152 (46%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
+ L + DD V +W G + +L G V SV F L+ + + +K+WD
Sbjct: 392 QLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTG 451
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ TL GH+ +V F AS D ++IWD K HT +GH+ + ++
Sbjct: 452 TGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSV 511
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
F+ D R + S D V++WD+ A L H F
Sbjct: 512 SFSHDSRLLASASNDQTVRIWDIEARSLQHTF 543
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 286 (105.7 bits), Expect = 7.3e-24, P = 7.3e-24
Identities = 64/246 (26%), Positives = 110/246 (44%)
Query: 9 QEFVAHSANVNCI--SIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAF 66
+ F H + + S+ KK L +G D + +W++ L G V V F
Sbjct: 14 RHFRGHRDAITSVDFSLNKKQ---LASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQF 70
Query: 67 DSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKI 126
+ LV +G+ + LW H + +V F G+ + D +K+
Sbjct: 71 SPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKV 130
Query: 127 WDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGH 186
W + ++ + + H + RF+PDGR + S D VK+WD T+ + +H F H G
Sbjct: 131 WTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGF 190
Query: 187 IRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFD 246
++FHP +A D+TVK WD+ L+ + V++++FHP G L + +
Sbjct: 191 ANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASN 250
Query: 247 DN-LKV 251
D+ LK+
Sbjct: 251 DSTLKI 256
Score = 274 (101.5 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 55/201 (27%), Positives = 94/201 (46%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAE 70
F AH+A V + + L+T DD+ + +W + + L SL + V F
Sbjct: 100 FKAHTATVRSVHFSSDG-QSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDG 158
Query: 71 VLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
L+ + + +KLWD + + + H VEFHP G A+ D +K+WD+R
Sbjct: 159 RLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVR 218
Query: 131 KKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSI 190
+ Y+ HT +N++ F P G ++++ D+ +K+ DL G+LL+ H+G +
Sbjct: 219 MNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCV 278
Query: 191 DFHPLEFLLATGSADRTVKFW 211
F A+G +D V W
Sbjct: 279 AFSRTGDFFASGGSDEQVMVW 299
Score = 269 (99.8 bits), Expect = 4.8e-22, P = 4.8e-22
Identities = 67/244 (27%), Positives = 102/244 (41%)
Query: 12 VAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEV 71
V H V C+ + +G D+ V LW ++ V SV F S
Sbjct: 59 VGHKDAVMCVQFSPSG-HLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQ 117
Query: 72 LVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRK 131
++ + IK+W + K + +L+ H + F P G AS D +K+WD
Sbjct: 118 SLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTS 177
Query: 132 KGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSID 191
+ CIH++ H N + F P G + + G D VKVWD+ +LL ++ H + S+
Sbjct: 178 RECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLS 237
Query: 192 FHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKV 251
FHP L T S D T+K DL L+ + + F G SG D +V
Sbjct: 238 FHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDE-QV 296
Query: 252 YSWE 255
W+
Sbjct: 297 MVWK 300
Score = 220 (82.5 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 52/168 (30%), Positives = 79/168 (47%)
Query: 88 EESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINT 147
E+ + R GH+ T+V+F + ASG MD+ LKIW ++ + + GH +
Sbjct: 8 EDPSLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMC 67
Query: 148 IRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRT 207
++F+P G V SG D V +W + FK H +RS+ F L T S D+T
Sbjct: 68 VQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKT 127
Query: 208 VKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
+K W + + + S + V F PDGR + S DD V W+
Sbjct: 128 IKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKT-VKLWD 174
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 292 (107.8 bits), Expect = 9.2e-24, Sum P(2) = 9.2e-24
Identities = 63/242 (26%), Positives = 114/242 (47%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAE 70
F H A + + + L TG D + LW++ G + SV F
Sbjct: 14 FKGHKAAITSVDFSPNG-KQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLG 72
Query: 71 VLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
L+ + + I+LW ++ H + +V+F G+F AS D ++K+W++
Sbjct: 73 NLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMY 132
Query: 131 KKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSI 190
++ +++ HT + +F+PDGR +VS D +K+WD T + +++F G +
Sbjct: 133 RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFV 192
Query: 191 DFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN-L 249
F+P +A+ +D TVK WD+ +L+ + GV+ ++FHP G L + D L
Sbjct: 193 AFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTL 252
Query: 250 KV 251
K+
Sbjct: 253 KI 254
Score = 288 (106.4 bits), Expect = 2.7e-23, Sum P(2) = 2.7e-23
Identities = 71/245 (28%), Positives = 108/245 (44%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAE 70
+V H + + L + D+ + LW K ++PV SV F SA+
Sbjct: 56 YVGHKDVITSVQFSPLG-NLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDF-SAD 113
Query: 71 VLVLAGASTGV-IKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI 129
LA AS IK+W++ + + +L H +F P G S D +KIWD
Sbjct: 114 GQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
K C++ + N + F P+G + S G D+ VK+WD+ KLL ++ H G +
Sbjct: 174 TNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNC 233
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNL 249
+ FHP L T S+D T+K DL LI + + V ++F G SG D
Sbjct: 234 VSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGAD-A 292
Query: 250 KVYSW 254
+V W
Sbjct: 293 QVLLW 297
Score = 265 (98.3 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 62/216 (28%), Positives = 101/216 (46%)
Query: 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
KRG K EF AH+A V + +FL + +D+ + +W + + L SL + V
Sbjct: 91 KRG-KSSEFKAHTAPVRSVDFSADG-QFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVR 148
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
F L+++ + IK+WD + V + V F+P G AS D
Sbjct: 149 CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDH 208
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
+KIWDIR + Y+ H+ G+N + F P G ++++ D +K+ DL G+L++ +
Sbjct: 209 TVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG 268
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFEL 218
H G + ++ F L +G AD V W EL
Sbjct: 269 HTGPVFTVSFSKGGELFTSGGADAQVLLWRTNFDEL 304
Score = 234 (87.4 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 65/244 (26%), Positives = 117/244 (47%)
Query: 88 EESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINT 147
E+ + R GHK+ T+V+F P G+ A+G DT L +W +R + Y GH I +
Sbjct: 6 EDPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITS 65
Query: 148 IRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRT 207
++F+P G + S D +++W +FK H +RS+DF LA+ S D++
Sbjct: 66 VQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKS 125
Query: 208 VKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN-LKVYSWEPVICHDSVD-- 264
+K W++ + S V F PDGR + S +D +K++ C ++
Sbjct: 126 IKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDF 185
Query: 265 MGWSTLGDLCIN-DGKLLGCSFYRNSVGIWVADVSHV-EPYGVGAPEPDQSICTEVKFNP 322
+G++ + N +G + + ++V IW V+ + + Y V + + C V F+P
Sbjct: 186 VGFANF--VAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVN---C--VSFHP 238
Query: 323 PGSH 326
G++
Sbjct: 239 SGNY 242
Score = 56 (24.8 bits), Expect = 9.2e-24, Sum P(2) = 9.2e-24
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 599 DVTPQTTLSSNEDHVANVTSQTRLNGNEYQAATAPQQTRLSSNIDPVANVTPQTLPSGNE 658
D+ P+T +E + V +L+ + Q +T P LS + T +TLP E
Sbjct: 327 DIYPRTP-HPHEGRIDTVEINPKLDVTDLQTSTPPVVDILSFDSTTTTETTVRTLPDKGE 385
Query: 659 D 659
+
Sbjct: 386 E 386
Score = 39 (18.8 bits), Expect = 5.5e-22, Sum P(2) = 5.5e-22
Identities = 22/93 (23%), Positives = 36/93 (38%)
Query: 308 PEPDQSICTEVKFNPPGSHSLEKVGIIGRSTSGFRSTSPDYETKDIKTIYVDSTGGKPVA 367
P P + V+ NP L+ + + S D T T+ G+ +
Sbjct: 333 PHPHEGRIDTVEINP----KLDVTDLQTSTPPVVDILSFDSTTTTETTVRTLPDKGEEIC 388
Query: 368 SQKIGP-LNSPKVVPPL---DSEEISDLQTEKQ 396
+ P L S + P + +E+ISDL +E Q
Sbjct: 389 GYFLNPSLMSSECSPTILKKKTEDISDLPSESQ 421
Score = 37 (18.1 bits), Expect = 8.8e-22, Sum P(2) = 8.8e-22
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 868 DIATVITPHVTALSYERTST 887
D+ T P V LS++ T+T
Sbjct: 353 DLQTSTPPVVDILSFDSTTT 372
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 305 (112.4 bits), Expect = 9.5e-24, P = 9.5e-24
Identities = 77/279 (27%), Positives = 132/279 (47%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAF------DSAEVLVLA-GASTGVIK 83
L+T LW++ +L G +S V VA D V+ +A G G +K
Sbjct: 276 LLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKADEENVVAMASGGHDGAVK 335
Query: 84 LWDLEESKMVRTLTGHKSN-CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHT 142
LW + + +TGH + + V FHP G F A+ C D++ ++WD+ +K + +GH
Sbjct: 336 LWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHA 395
Query: 143 RGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATG 202
+ ++ + + DG +V+GG D +VWDL G+ + + H G + +DF P F +ATG
Sbjct: 396 KPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATG 455
Query: 203 SADRTVKFWDLETFELIGSTRPEVTGVHAITFHPD-GRTLFS-GFDDNLKVYS---WEPV 257
S D T K WDL + + + + + + + G L + +D K++S W+P+
Sbjct: 456 SQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPL 515
Query: 258 ICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVAD 296
D ++ D+ N + SF R + +W D
Sbjct: 516 KTLQGHDNKVISV-DIAPNSQYIATTSFDR-TFKLWSPD 552
Score = 255 (94.8 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 53/184 (28%), Positives = 92/184 (50%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
RFL T D LW + + T ++ G + PV +++ S +++ G ++WDL
Sbjct: 366 RFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLR 425
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ + L GH V+F P G A+G D KIWD+R++ ++T HT I+ +
Sbjct: 426 TGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDV 485
Query: 149 RFTPD-GRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRT 207
++ + G ++V+ +D+ K+W + L + H+ + S+D P +AT S DRT
Sbjct: 486 KYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRT 545
Query: 208 VKFW 211
K W
Sbjct: 546 FKLW 549
Score = 218 (81.8 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 58/207 (28%), Positives = 95/207 (45%)
Query: 51 LMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHP 110
L S G + PV S AF L+L + +G+ KLW + + ++ +TL GH S V P
Sbjct: 254 LCSQVGDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRP 313
Query: 111 FGEF-------FASGCMDTNLKIWDIRKKGCIHTYKGHT-RGINTIRFTPDGRWVVSGGF 162
+ ASG D +K+W + I GH ++ + F P GR++ + +
Sbjct: 314 GVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACY 373
Query: 163 DNVVKVWDLTAG-KLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGS 221
D+ ++WDL ++LH + H + + +H +L TG D + WDL T I
Sbjct: 374 DSSWRLWDLEQKTEVLHQ-EGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMF 432
Query: 222 TRPEVTGVHAITFHPDGRTLFSGFDDN 248
+ V + F P+G + +G DN
Sbjct: 433 LEGHLGAVFGVDFSPNGFHIATGSQDN 459
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 302 (111.4 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 69/251 (27%), Positives = 123/251 (49%)
Query: 6 YKLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
+KL ++ H V CI++ + + TG D+ + +W + +SL G S V V
Sbjct: 162 WKLSRVISGHLGWVRCIAV-EPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGV 220
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
A + + + +K WDLE +K++R GH S ++ HP + A+ D+
Sbjct: 221 AVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTA 280
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
+IWD+R K +HT GHT + ++ +++G D+ V++WDL AGK + H+
Sbjct: 281 RIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHK 340
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG 244
+RSI HP ++ A+ S D +K W + + + + V+ + + +G L SG
Sbjct: 341 KSVRSIVLHPSLYMFASASPDN-IKQWRCPEGKFVQNISGHTSIVNCMAANSEG-VLVSG 398
Query: 245 FDDNLKVYSWE 255
DN ++ W+
Sbjct: 399 -GDNGTMFFWD 408
Score = 206 (77.6 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 66/273 (24%), Positives = 116/273 (42%)
Query: 7 KLQ-EFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVA 65
KL+ H + V +++ K +L + G+D++V W + + G S V S+A
Sbjct: 205 KLKLSLTGHVSTVRGVAVSTKH-PYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLA 263
Query: 66 FD-SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
+ +VL +G + ++WD+ V TLTGH + +V +G D+ +
Sbjct: 264 LHPTIDVLATSGRDS-TARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTV 322
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
++WD+ + T H + + +I P S DN+ K W GK + + H
Sbjct: 323 RLWDLAAGKSVCTLTNHKKSVRSIVLHPSLYMFASASPDNI-KQWRCPEGKFVQNISGHT 381
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLET---FELI------GSTRPEVTGVHAITFH 235
+ + + E +L +G + T+ FWD T F+ GS E G+ A+ F
Sbjct: 382 SIVNCMAANS-EGVLVSGGDNGTMFFWDWRTGYNFQRFQAPVQPGSMDSEA-GIFAMCFD 439
Query: 236 PDGRTLFSG-FDDNLKVYSWEPVICHDSVDMGW 267
G L + D +KVY + +S + W
Sbjct: 440 QSGSRLITAEADKTIKVYKEDDEASEESHPINW 472
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 284 (105.0 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 60/211 (28%), Positives = 109/211 (51%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G ++ + H+ C++ ++ +++G D+ V +W + L L S PV +V
Sbjct: 103 GSLIKTLIGHTNYAFCVNFNPQS-NMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAV 161
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTA-VEFHPFGEFFASGCMDTN 123
F+ L+++ + G+ ++WD V+TL ++ + V F P G+F G +D
Sbjct: 162 DFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNT 221
Query: 124 LKIWDIRKKGCIHTYKGHTRG---INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
L++W+I + TY GH I++ +G+ +VSG DN V +W+L + KLL
Sbjct: 222 LRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKL 281
Query: 181 KFHEGHIRSIDFHPLEFLLATGSADRTVKFW 211
+ H + ++ HP E L+A+GS D+TV+ W
Sbjct: 282 EGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 277 (102.6 bits), Expect = 6.7e-23, P = 6.7e-23
Identities = 60/254 (23%), Positives = 124/254 (48%)
Query: 8 LQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFD 67
+QEF H ++ ++ A RF+++ DD+ + LW + + + +L G ++ V F+
Sbjct: 64 VQEFTGHENGISDVAFSSDA-RFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFN 122
Query: 68 SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIW 127
++++G+ +++WD+ K ++ L H TAV+F+ G S D +IW
Sbjct: 123 PQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIW 182
Query: 128 DIRKKGCIHTY-KGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGH 186
D C+ T ++ +RF+P+G++++ G DN +++W++++ K L K + GH
Sbjct: 183 DSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFL---KTYTGH 239
Query: 187 IRSIDFHPLEFL------LATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
+ + F + +GS D V W+L + +L+ V + HP
Sbjct: 240 VNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENL 299
Query: 241 LFSG-FDDNLKVYS 253
+ SG D +++++
Sbjct: 300 IASGSLDKTVRIWT 313
Score = 271 (100.5 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 61/256 (23%), Positives = 115/256 (44%)
Query: 9 QEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGK---PTA--LMSLCGLSSPVDS 63
Q +H+ V+ + R L + D+ + + I P A + G + +
Sbjct: 18 QTLTSHNRAVSSVKFSSDG-RLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISD 76
Query: 64 VAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN 123
VAF S +++ + +KLWD+E +++TL GH + V F+P SG D
Sbjct: 77 VAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDET 136
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
++IWD+ C+ H+ + + F DG +VS +D + ++WD G +
Sbjct: 137 VRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDD 196
Query: 184 EGH-IRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAIT--FH-PDGR 239
E + + F P + G+ D T++ W++ + + + + V + I+ F +G+
Sbjct: 197 ENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGK 256
Query: 240 TLFSGFDDNLKVYSWE 255
+ SG +DN V+ WE
Sbjct: 257 RIVSGSEDNC-VHMWE 271
Score = 172 (65.6 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 57/251 (22%), Positives = 102/251 (40%)
Query: 137 TYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTA-----GKLLHDFKFHEGHIRSID 191
T H R +++++F+ DGR + S D ++ + + + + +F HE I +
Sbjct: 19 TLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVA 78
Query: 192 FHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLK 250
F + + S D+T+K WD+ET LI + + F+P + SG FD+ ++
Sbjct: 79 FSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVR 138
Query: 251 VYSWEPVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWVADVSHVEPYGVGAPE 309
++ C + + + N DG L+ S Y IW + H +
Sbjct: 139 IWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDEN 198
Query: 310 PDQSICTEVKFNPPGSHSLEKVGIIGRSTSGFRSTSPDYETKDIKTIYVDSTGGKPVASQ 369
P S V+F+P G L VG + + + +S K +KT Y + S
Sbjct: 199 PPVSF---VRFSPNGKFIL--VGTLDNTLRLWNISS----AKFLKT-YTGHVNAQYCISS 248
Query: 370 KIGPLNSPKVV 380
N ++V
Sbjct: 249 AFSVTNGKRIV 259
Score = 121 (47.7 bits), Expect = 0.00045, P = 0.00045
Identities = 28/107 (26%), Positives = 49/107 (45%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSP--VDSVAFDSAE-VLVLAGASTGVIKLW 85
+F++ G D + LW I L + G + S AF +++G+ + +W
Sbjct: 211 KFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMW 270
Query: 86 DLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
+L K+++ L GH V HP ASG +D ++IW +K+
Sbjct: 271 ELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQKKE 317
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 308 (113.5 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 65/215 (30%), Positives = 105/215 (48%)
Query: 12 VAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEV 71
V HS V S ++L++G +D+ V LW++ TAL+S G + PV V+F
Sbjct: 522 VGHSGTVYSTSFSPDN-KYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGH 580
Query: 72 LVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRK 131
+ +LW + +R GH ++ V FHP G + +G D ++WD+
Sbjct: 581 YFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVST 640
Query: 132 KGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFH-EGHIRSI 190
+ + GHT + +I PDGRW+ +G D ++ VWD+ GK L + H + I S+
Sbjct: 641 GDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSL 700
Query: 191 DFHPLEFLLATGSADRTVKFWDLETFELIGSTRPE 225
+ +L +G AD TV+ WDL+ S P+
Sbjct: 701 SYSKEGNVLISGGADHTVRVWDLKKATTEPSAEPD 735
Score = 237 (88.5 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 61/233 (26%), Positives = 107/233 (45%)
Query: 48 PTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVE 107
PT +L G S V S +F +L+G+ ++LW ++ + + GH V
Sbjct: 516 PTC-KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVS 574
Query: 108 FHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVK 167
F P G +FA+ D ++W + + GH ++ + F P+G +V +G D +
Sbjct: 575 FSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCR 634
Query: 168 VWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPE-V 226
+WD++ G + F H + SI P L+TGS D + WD+ T + + R
Sbjct: 635 MWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGK 694
Query: 227 TGVHAITFHPDGRTLFSGFDDN------LKVYSWEPVICHDSVDMGWSTLGDL 273
++++++ +G L SG D+ LK + EP D +G+ LGD+
Sbjct: 695 NAIYSLSYSKEGNVLISGGADHTVRVWDLKKATTEPSAEPDEPFIGY--LGDV 745
Score = 222 (83.2 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 45/173 (26%), Positives = 81/173 (46%)
Query: 86 DLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGI 145
D +E +TL GH + F P ++ SG D +++W + + +YKGH +
Sbjct: 511 DKDEDPTCKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPV 570
Query: 146 NTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSID---FHPLEFLLATG 202
+ F+P G + + D ++W ++ + GH+ +D FHP + TG
Sbjct: 571 WDVSFSPLGHYFATASHDQTARLWSCDH---IYPLRIFAGHLNDVDCVSFHPNGCYVFTG 627
Query: 203 SADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
S+D+T + WD+ T + + V +I PDGR L +G +D + + W+
Sbjct: 628 SSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGI-INVWD 679
Score = 171 (65.3 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 33/127 (25%), Positives = 63/127 (49%)
Query: 6 YKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVA 65
Y L+ F H +V+C+S C ++ TG D+ +W + ++ G ++PV S+A
Sbjct: 600 YPLRIFAGHLNDVDCVSFHPNGC-YVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIA 658
Query: 66 FDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCT-AVEFHPFGEFFASGCMDTNL 124
+ G+ G+I +WD+ K ++ + GH N ++ + G SG D +
Sbjct: 659 VCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTV 718
Query: 125 KIWDIRK 131
++WD++K
Sbjct: 719 RVWDLKK 725
Score = 41 (19.5 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 6/29 (20%), Positives = 14/29 (48%)
Query: 17 NVNCISIGKKACRFLITGGDDQKVNLWAI 45
+++C+ CR G D + +W++
Sbjct: 468 DMSCLDFSDD-CRIAAAGFQDSYIKIWSL 495
Score = 39 (18.8 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 72 LVLAGASTGVIKLWDLEESKM 92
+ AG IK+W L+ S +
Sbjct: 480 IAAAGFQDSYIKIWSLDGSSL 500
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 292 (107.8 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 62/244 (25%), Positives = 107/244 (43%)
Query: 9 QEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDS 68
+ F H V C+ + L +G D + +W + + G V V F
Sbjct: 13 RHFKGHRDAVTCVDFSLNT-KHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSP 71
Query: 69 AEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWD 128
+ L+ +G+ +++W H + +V F G+ + D +K+W
Sbjct: 72 SGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWS 131
Query: 129 IRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIR 188
++ + + H + +F+PDGR +VS D VK+WD T+ + +H + H G +
Sbjct: 132 THRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVT 191
Query: 189 SIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN 248
+DFHP +A D TVK WD T L+ + V+A++FHP G L + D+
Sbjct: 192 YVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDS 251
Query: 249 -LKV 251
LK+
Sbjct: 252 TLKI 255
Score = 286 (105.7 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 71/263 (26%), Positives = 110/263 (41%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
R Y+ F H V C++ L +G D+ V +W ++ V S
Sbjct: 53 RAYR---FTGHKDAVTCVNFSPSG-HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRS 108
Query: 64 VAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN 123
V F S ++ + +K+W + + +LT H + +F P G S D
Sbjct: 109 VHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKT 168
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
+K+WD + CIH+Y H + + F P G + + G DN VKVWD +LL ++ H
Sbjct: 169 VKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLH 228
Query: 184 EGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS 243
+ ++ FHP L T S+D T+K DL L+ + + F G S
Sbjct: 229 SAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 288
Query: 244 GFDDNLKVYSWEPVICHDSVDMG 266
G D +V W+ D VD G
Sbjct: 289 GGSDE-QVMVWKSNF--DIVDYG 308
Score = 229 (85.7 bits), Expect = 8.4e-16, P = 8.4e-16
Identities = 60/212 (28%), Positives = 92/212 (43%)
Query: 88 EESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINT 147
E+ + R GH+ T V+F + ASG MD+ L IW ++ + + + GH +
Sbjct: 7 EDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTC 66
Query: 148 IRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRT 207
+ F+P G + SG D V++W F+ H +RS+ F L T S D+T
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKT 126
Query: 208 VKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVI--C-HDSVD 264
VK W + S + V F PDGR + S DD V W+ C H +
Sbjct: 127 VKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKT-VKLWDKTSRECIHSYCE 185
Query: 265 MG-WSTLGDLCINDGKLLGCSFYRNSVGIWVA 295
G + T D + G + + N+V +W A
Sbjct: 186 HGGFVTYVDFHPS-GTCIAAAGMDNTVKVWDA 216
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 283 (104.7 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 66/258 (25%), Positives = 120/258 (46%)
Query: 3 KRGYKLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
K Y L+ +A HSA ++ + +L + D + +W +L G S +
Sbjct: 26 KPNYALRLTLAGHSAAISSVKFSPNG-EWLASSAADALIIIWGAYDGNCKKTLYGHSLEI 84
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
VA+ S +++ + +K+WD+ K ++TL GH +F+P SG D
Sbjct: 85 SDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFD 144
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
++KIW+++ C+ T H+ I+ + F +G +VSG +D + ++WD +G+ L
Sbjct: 145 ESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLA 204
Query: 182 FHEGH--IRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAI--TFHPD 237
EG+ + + F P + T + D T+K WD + + + + +F
Sbjct: 205 -DEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVT 263
Query: 238 GRT-LFSGFDDNLKVYSW 254
GR + SG +DN+ VY W
Sbjct: 264 GRKWVVSGSEDNM-VYIW 280
Score = 276 (102.2 bits), Expect = 8.5e-23, P = 8.5e-23
Identities = 60/215 (27%), Positives = 109/215 (50%)
Query: 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
+ G L+ HS V C + +++G D+ V +W + L +L S P+
Sbjct: 111 RSGKCLKTLKGHSDFVFCCDFNPPS-NLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPIS 169
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTA-VEFHPFGEFFASGCMD 121
+V F+ L+++G+ G+ ++WD + +RTL + + V+F P G++ + +D
Sbjct: 170 AVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLD 229
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTI--RFTPDGR-WVVSGGFDNVVKVWDLTAGKLLH 178
LK+WD + C+ TY GH + F+ GR WVVSG DN+V +W+L +++
Sbjct: 230 NTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQ 289
Query: 179 DFKFHEGHIRSIDFHPLEFLLATGSA--DRTVKFW 211
+ H + S HP + ++A+ + D+T+K W
Sbjct: 290 RLQGHTDVVISAACHPTKNIIASAALENDKTIKVW 324
Score = 260 (96.6 bits), Expect = 4.4e-21, P = 4.4e-21
Identities = 61/248 (24%), Positives = 121/248 (48%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
HS ++ ++ + R L++ DD+ + +W + L +L G S V F+ L+
Sbjct: 80 HSLEISDVAWSSDSSR-LVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLI 138
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
++G+ +K+W+++ K ++TL+ H +AV F+ G SG D +IWD
Sbjct: 139 VSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQ 198
Query: 134 CIHTYKGHTRG-INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGH----IR 188
C+ T ++ ++F+P+G+++++ DN +K+WD + G+ L + H+
Sbjct: 199 CLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFA 258
Query: 189 SIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF--- 245
S +++++ GS D V W+L+T E++ + V + HP + S
Sbjct: 259 SFSVTGRKWVVS-GSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALEN 317
Query: 246 DDNLKVYS 253
D +KV+S
Sbjct: 318 DKTIKVWS 325
Score = 256 (95.2 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 61/217 (28%), Positives = 103/217 (47%)
Query: 47 KPT-AL-MSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCT 104
KP AL ++L G S+ + SV F + + A+ +I +W + +TL GH +
Sbjct: 26 KPNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEIS 85
Query: 105 AVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDN 164
V + S D LK+WD+R C+ T KGH+ + F P +VSG FD
Sbjct: 86 DVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDE 145
Query: 165 VVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRP 224
VK+W++ GK L H I +++F+ L+ +GS D + WD + + + +
Sbjct: 146 SVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLAD 205
Query: 225 EVTG-VHAITFHPDGRTLFSG-FDDNLKVYSWEPVIC 259
E V + F P+G+ + + D+ LK++ + C
Sbjct: 206 EGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRC 242
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 300 (110.7 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 62/243 (25%), Positives = 118/243 (48%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H V C+ + + ++ TG D+ + +W + ++L G + V +A +
Sbjct: 162 HLGWVRCVDV-EPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYL 220
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
+ ++K WDLE +K++R GH S A++ HP + + D ++WD+R +
Sbjct: 221 FSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQ 280
Query: 134 CIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFH 193
+H GH + ++ VV+G D+ +++WDL AGK L H+ +R++ H
Sbjct: 281 NVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLH 340
Query: 194 PLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD-NLKVY 252
P EF A+GS+D +K W +G+ V+ ++ + D +FSG D+ ++ +
Sbjct: 341 PDEFTFASGSSDN-IKHWKFPEGAFMGNFEGHNAIVNTLSINSDN-VMFSGADNGSMCFW 398
Query: 253 SWE 255
W+
Sbjct: 399 DWK 401
Score = 247 (92.0 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 58/218 (26%), Positives = 96/218 (44%)
Query: 76 GASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCI 135
GA IK+WDL + TLTGH + + P + S D +K WD+ I
Sbjct: 181 GAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVI 240
Query: 136 HTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL 195
Y GH G+ ++ P +V+ G D V +VWD+ + +H H+ + S+
Sbjct: 241 RHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQEF 300
Query: 196 EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
+ + TGS D T++ WDL + + + V A++ HPD T SG DN+K + +
Sbjct: 301 DPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLHPDEFTFASGSSDNIKHWKFP 360
Query: 256 PVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIW 293
+ + + + L IN ++ S+ W
Sbjct: 361 EGAFMGNFEGHNAIVNTLSINSDNVMFSGADNGSMCFW 398
Score = 181 (68.8 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 42/166 (25%), Positives = 73/166 (43%)
Query: 50 ALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFH 109
+L + G+ +A +S LV + + W + M R ++GH V+
Sbjct: 114 SLEKIKGVPEAAHRIAGESQASLVKRTLAEQIRPEWHAPWTLM-RVISGHLGWVRCVDVE 172
Query: 110 PFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVW 169
P ++F +G D +KIWD+ T GH + + +P ++ S G D +VK W
Sbjct: 173 PGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCW 232
Query: 170 DLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET 215
DL K++ + H + ++ HP +L T D + WD+ T
Sbjct: 233 DLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRT 278
Score = 151 (58.2 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 31/98 (31%), Positives = 49/98 (50%)
Query: 140 GHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLE-FL 198
GH + + P +W +G D +K+WDL +G L H +R + P +L
Sbjct: 161 GHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYL 220
Query: 199 LATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHP 236
+ G D+ VK WDLET ++I ++GV+A+ HP
Sbjct: 221 FSCGE-DKMVKCWDLETNKVIRHYHGHLSGVYALKLHP 257
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 290 (107.1 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 77/252 (30%), Positives = 108/252 (42%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
R Y+ +V H V + L + D+ V LW K ++PV S
Sbjct: 52 RAYR---YVGHKDVVTSVQFSPHG-NLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRS 107
Query: 64 VAFDSAEVLVLAGASTGV-IKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
V F SA+ LA AS IK+W + + + +L H +F P G S D
Sbjct: 108 VDF-SADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 166
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
+KIWD K C++ + N + F P G + S G D VKVWD+ KLL ++
Sbjct: 167 TIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQV 226
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLF 242
H G + I FHP L T S+D T+K DL LI + + V ++F G
Sbjct: 227 HSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFA 286
Query: 243 SGFDDNLKVYSW 254
SG D +V W
Sbjct: 287 SGGADT-QVLLW 297
Score = 287 (106.1 bits), Expect = 3.6e-23, Sum P(2) = 3.6e-23
Identities = 66/243 (27%), Positives = 116/243 (47%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTA-LMSLCGLSSPVDSVAFDSA 69
F H A + + + + L T D + LW KP A G V SV F
Sbjct: 14 FKGHKAAITSLDLSPNG-KQLATASWDTFLMLWNF-KPHARAYRYVGHKDVVTSVQFSPH 71
Query: 70 EVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI 129
L+ + + ++LW ++ H + +V+F G+F A+ D ++K+W +
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
++ +++ HT + +F+PDGR +VS D +K+WD T + +++F G
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 191
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN- 248
+DF+P +A+ +D+TVK WD+ +L+ + GV+ I+FHP G L + D
Sbjct: 192 VDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGT 251
Query: 249 LKV 251
LK+
Sbjct: 252 LKI 254
Score = 284 (105.0 bits), Expect = 8.3e-23, Sum P(2) = 8.3e-23
Identities = 66/230 (28%), Positives = 110/230 (47%)
Query: 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
KRG K EF AH+A V + +FL T +D+ + +W++ + L SL + V
Sbjct: 91 KRG-KFSEFKAHTAPVRSVDFSADG-QFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVR 148
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
F L+++ + IK+WD + V + V+F+P G AS D
Sbjct: 149 CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQ 208
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
+K+WD+R + Y+ H+ G+N I F P G ++++ D +K+ DL G+L++ +
Sbjct: 209 TVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG 268
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELI--GSTRPEVTGVH 230
H G + ++ F L A+G AD V W EL G T+ + +H
Sbjct: 269 HTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELHCKGLTKRNLKRLH 318
Score = 224 (83.9 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 61/243 (25%), Positives = 112/243 (46%)
Query: 88 EESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINT 147
E+ + R GHK+ T+++ P G+ A+ DT L +W+ + + Y GH + +
Sbjct: 6 EDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTS 65
Query: 148 IRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRT 207
++F+P G + S D V++W +FK H +RS+DF LAT S D++
Sbjct: 66 VQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKS 125
Query: 208 VKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN-LKVYSWEPVICHD--SVD 264
+K W + + S V F PDGR + S +D +K++ C + S
Sbjct: 126 IKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDS 185
Query: 265 MGWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHV-EPYGVGAPEPDQSICTEVKFNPP 323
+G++ D + G + + +V +W V+ + + Y V + + C + F+P
Sbjct: 186 VGFANFVDFNPS-GTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVN---C--ISFHPS 239
Query: 324 GSH 326
G++
Sbjct: 240 GNY 242
Score = 56 (24.8 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 20/88 (22%), Positives = 40/88 (45%)
Query: 599 DVTPQTTLSSNEDHVANVTSQTRLNGNEYQAATAPQQTRLSSNIDPVANVTPQTLPSGNE 658
D+ P+T +E+ V V +L + Q +T P LS + + +TLP E
Sbjct: 327 DIYPRTP-HPHEEKVETVEINPKLEVIDLQISTPPVMDILSFDSTTTTETSGRTLPDKGE 385
Query: 659 DQAA---N---VTPQTRPSSNEDQTANV 680
+ N ++P+ P++ + +T ++
Sbjct: 386 EACGYFLNPSLMSPECLPTTTKKKTEDM 413
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 308 (113.5 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 67/219 (30%), Positives = 111/219 (50%)
Query: 7 KLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAF 66
+ + F+ HS V S + ++L++ +D LW++ + L+ G + PV V+F
Sbjct: 671 EFKTFLGHSGPVYGCSFSPDS-QYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSF 729
Query: 67 DSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKI 126
+ +LW +R TGH S+C V FHP + A+G D + ++
Sbjct: 730 SPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARL 789
Query: 127 WDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGH 186
W+I+ C+ + GH I T+ F+PDGR + + G D V +WDL+ GK + H
Sbjct: 790 WEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKC 849
Query: 187 IRSIDFHPLEFLLATGSADRTVKFWDLE-TFELIGSTRP 224
+ S+DF +LA+GS+D TV+ WD++ F ST+P
Sbjct: 850 VYSLDFSCDGSILASGSSDCTVRLWDVKKAFNSSLSTQP 888
Score = 251 (93.4 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 61/225 (27%), Positives = 96/225 (42%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L +G L K + + G S PV +F +L+ + +LW +E
Sbjct: 652 LNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETM 711
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ GH V F PFG +FA+ D ++W + + GH NT+RF
Sbjct: 712 SNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRF 771
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
P+ ++ +G D ++W++ GK + F H I ++ F P LLAT D +V
Sbjct: 772 HPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVIL 831
Query: 211 WDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
WDL T + + V+++ F DG L SG D V W+
Sbjct: 832 WDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSD-CTVRLWD 875
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 282 (104.3 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 57/221 (25%), Positives = 115/221 (52%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
++ G +++ H++ VN ++ + TG DD V LW I K ++ + + V
Sbjct: 128 SETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQN-TYQV 186
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
SV F+ +++G IK+WDL ++K++ ++ GH + T + G + S MD
Sbjct: 187 LSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMD 246
Query: 122 TNLKIWDIR----KKGCIHTYKGHTRGI--NTIR--FTPDGRWVVSGGFDNVVKVWDLTA 173
++++WDIR K+ C+ ++G+ N +R ++ DG + +G D V +WD T
Sbjct: 247 NSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTT 306
Query: 174 GKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLE 214
++++ H G + + FHP E ++ +GS+D+ + +++
Sbjct: 307 RRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYIGEIQ 347
Score = 240 (89.5 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 56/207 (27%), Positives = 98/207 (47%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAI-GKPTALMSLCGLSSPVDSVAFDSAEVL 72
H V C L + G D+ + +W + G +L G S V + +++ L
Sbjct: 55 HEGEVYCCKFHPNGAT-LASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSL 113
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKS---NCTAVEFHPFGEFFASGCMDTNLKIWDI 129
+ + ++ + +WD E + V+ L GH S +C P + +G D +K+WDI
Sbjct: 114 LFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGP--QLACTGSDDGTVKLWDI 171
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
RKK +HT++ +T + ++ F ++SGG DN +KVWDL KL++ + H +
Sbjct: 172 RKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTG 230
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETF 216
+ L + S D +V+ WD+ F
Sbjct: 231 LSLSADGSYLLSNSMDNSVRVWDIRPF 257
Score = 235 (87.8 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 62/235 (26%), Positives = 109/235 (46%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAE--VLVLAGASTGVIKLWDLE 88
L + D+ V +W + L G +S V+S F + L G+ G +KLWD+
Sbjct: 114 LFSASTDKTVCVWDSETGERVKRLKGHTSFVNS-CFPARRGPQLACTGSDDGTVKLWDIR 172
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ V T + +V F+ + SG +D ++K+WD+R+ I++ +GH + +
Sbjct: 173 KKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGL 231
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTA-GKLLHDFKFHEGHIRSIDFHPLEFL-------LA 200
+ DG +++S DN V+VWD+ K +G++ + + + L +A
Sbjct: 232 SLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIA 291
Query: 201 TGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
GSADR V WD T ++ V+ + FHP+ + SG D ++Y E
Sbjct: 292 AGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDK-RLYIGE 345
Score = 189 (71.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 57/206 (27%), Positives = 89/206 (43%)
Query: 93 VRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIH--TYKGHTRGINTIRF 150
+ L+GH+ +FHP G AS D + +W++ C + T KGH+ + + +
Sbjct: 49 IMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGD-CENYATLKGHSGAVMELHY 107
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS-IDFHPLEFLLATGSADRTVK 209
DG + S D V VWD G+ + K H + S L TGS D TVK
Sbjct: 108 NTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVK 167
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSW-EPVICHDSVDMGW 267
WD+ + T V ++TF+ + SG D+++KV+ + + + G
Sbjct: 168 LWDIRKKASV-HTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGD 226
Query: 268 STLGDLCINDGKLLGCSFYRNSVGIW 293
S G DG L + NSV +W
Sbjct: 227 SVTGLSLSADGSYLLSNSMDNSVRVW 252
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 291 (107.5 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 60/209 (28%), Positives = 108/209 (51%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
++ G +++ H++ VN ++ + + TG DD V LW I K A+ + + V
Sbjct: 138 SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQV 196
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
+V F+ +++G IK+WDL ++K+ T+ GH + T + G + S MD
Sbjct: 197 LAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD 256
Query: 122 TNLKIWDIR----KKGCIHTYKGHTRGI--NTIR--FTPDGRWVVSGGFDNVVKVWDLTA 173
+++WD+R K+ C+ ++G+ N +R ++PDG + +G D V VWD T+
Sbjct: 257 NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS 316
Query: 174 GKLLHDFKFHEGHIRSIDFHPLEFLLATG 202
++L+ H G I + FHP E ++ TG
Sbjct: 317 RRILYKLPGHAGSINEVAFHPDEPIIETG 345
Score = 242 (90.2 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 65/254 (25%), Positives = 111/254 (43%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAI-GKPTALMSLCGLSSPVDSVAFDSAEVL 72
H V C L + G D+ + LW + G +L G S V + +++ +
Sbjct: 65 HEGEVYCCKFHPNGST-LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 123
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKS---NCTAVEFHPFGEFFASGCMDTNLKIWDI 129
+ + ++ + +WD E + V+ L GH S +C P + +G D +K+WDI
Sbjct: 124 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP--QLVCTGSDDGTVKLWDI 181
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
RKK I T++ +T + + F ++SGG DN +KVWDL KL + + H +
Sbjct: 182 RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 240
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFE--------LIGSTRPEVTGVHAITFHPDGRTL 241
+ L + + D TV+ WD+ F G+ + ++ PDG +
Sbjct: 241 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKI 300
Query: 242 FSGFDDNLKVYSWE 255
+G D VY W+
Sbjct: 301 AAGSADRF-VYVWD 313
Score = 234 (87.4 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 57/224 (25%), Positives = 104/224 (46%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV-AFDSAEVLVLAGASTGVIKLWDLEE 89
L + D+ V +W + L G +S V+S LV G+ G +KLWD+ +
Sbjct: 124 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 183
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
++T + AV F+ + SG +D ++K+WD+R+ +T +GH + +
Sbjct: 184 KAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 242
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTA-GKLLHDFKFHEGHIRSID-------FHPLEFLLAT 201
+ +G +++S DN V+VWD+ K +G++ + + + P +A
Sbjct: 243 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAA 302
Query: 202 GSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF 245
GSADR V WD + ++ ++ + FHPD + +GF
Sbjct: 303 GSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIETGF 346
Score = 194 (73.4 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 60/217 (27%), Positives = 95/217 (43%)
Query: 93 VRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIH--TYKGHTRGINTIRF 150
+ L+GH+ +FHP G AS D + +W++ C + T KGH+ + + +
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHY 117
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEF---LLATGSADRT 207
DG + S D V VWD G+ + K H + S +P L+ TGS D T
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC--YPARRGPQLVCTGSDDGT 175
Query: 208 VKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSW-EPVICHDSVDM 265
VK WD+ I T V A+TF+ + SG D+++KV+ + + +
Sbjct: 176 VKLWDIRKKAAI-QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGH 234
Query: 266 GWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHVEP 302
S G ++G L + N+V +W DV P
Sbjct: 235 ADSVTGLSLSSEGSYLLSNAMDNTVRVW--DVRPFAP 269
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 301 (111.0 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 67/204 (32%), Positives = 98/204 (48%)
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
+ SV F + GA +K+WD+ K+ T GH+ + ++++ G F SG
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSG 389
Query: 121 DTNLKIWDIRKKGCIHTYK----GHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKL 176
D KIWDI K C T G G+ ++ +PDGR V +G DN+V++WD G
Sbjct: 390 DKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYF 449
Query: 177 LHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTG----VHAI 232
L ++ H + S+ F P LA+GS D+++K WDL R G V ++
Sbjct: 450 LERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSV 509
Query: 233 TFHPDGRTLFSGFDDNLKVYSWEP 256
F PDG L SG D V W+P
Sbjct: 510 AFSPDGSWLISGSKDR-SVQFWDP 532
Score = 275 (101.9 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 65/221 (29%), Positives = 106/221 (47%)
Query: 7 KLQE-FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSL----CGLSSPV 61
K+Q F H ++ + RF+++G D+K +W I K +L G + V
Sbjct: 360 KIQHTFYGHELDIYSLDYSSDG-RFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGV 418
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
SVA LV AG+ +++LWD + + GH + +V F P G+ ASG +D
Sbjct: 419 TSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLD 478
Query: 122 TNLKIWDI---RKKG-CIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLL 177
+LK+WD+ R + C T+ GH + ++ F+PDG W++SG D V+ WD G
Sbjct: 479 KSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTH 538
Query: 178 HDFKFHEGHIRSIDFHPLEF---LLATGSADRTVKFWDLET 215
+ H+ + S+ P + ATGS D + W ++
Sbjct: 539 MMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLWKYDS 579
Score = 271 (100.5 bits), Expect = 6.2e-20, P = 6.2e-20
Identities = 64/221 (28%), Positives = 108/221 (48%)
Query: 5 GYKLQEFVAHSANVNCISIGKKAC-----RFLITGGDDQKVNLWAIGKPTALMSLCGLSS 59
G K+ FV S + I + C +L TG +D+ V +W I + G
Sbjct: 312 GKKVHAFVDESEKDGDLYI-RSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHEL 370
Query: 60 PVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTL----TGHKSNCTAVEFHPFGEFF 115
+ S+ + S +++G+ K+WD+E+ K TL G K+ T+V P G
Sbjct: 371 DIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLV 430
Query: 116 ASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGK 175
A+G +D +++WD + + Y+GH + ++ F+PDG+ + SG D +K+WDL+ +
Sbjct: 431 AAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSR 490
Query: 176 LLH----DFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
F H+ + S+ F P L +GS DR+V+FWD
Sbjct: 491 SRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWD 531
Score = 249 (92.7 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 60/205 (29%), Positives = 98/205 (47%)
Query: 58 SSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSN-----CTAVEFHPFG 112
+S V V F + + G + +++D++ K V +V F P G
Sbjct: 281 NSVVCCVNFSNDGKYLATGCNRSA-QIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDG 339
Query: 113 EFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLT 172
+ A+G D +K+WDI K HT+ GH I ++ ++ DGR++VSG D K+WD+
Sbjct: 340 NYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIE 399
Query: 173 AGKLLHDFKFHE----GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTG 228
GK E + S+ P L+A GS D V+ WD +T + +
Sbjct: 400 KGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDS 459
Query: 229 VHAITFHPDGRTLFSG-FDDNLKVY 252
V+++ F PDG++L SG D +LK++
Sbjct: 460 VYSVAFSPDGKSLASGSLDKSLKLW 484
Score = 217 (81.4 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 64/239 (26%), Positives = 106/239 (44%)
Query: 99 HKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTR--G---INTIRFTPD 153
H S V F G++ A+GC + + +I+D+ +H + + G I ++ F+PD
Sbjct: 280 HNSVVCCVNFSNDGKYLATGC-NRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 338
Query: 154 GRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDL 213
G ++ +G D VKVWD+ K+ H F HE I S+D+ + +GS D+ K WD+
Sbjct: 339 GNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDI 398
Query: 214 E----TFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVICH--DSVDMGW 267
E F L GV ++ PDGR + +G DN+ V W+ + + +
Sbjct: 399 EKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNI-VRLWDAQTGYFLERYEGHL 457
Query: 268 STLGDLCIN-DGKLLGCSFYRNSVGIWVADVSHVEPYGVGAPEPDQSICTEVKFNPPGS 325
++ + + DGK L S+ +W S + V F+P GS
Sbjct: 458 DSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGS 516
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 292 (107.8 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 70/272 (25%), Positives = 124/272 (45%)
Query: 60 PVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFH-PFGEFFASG 118
P+ +VA + + + G+ KLWD + + TL GH++ A+ F+ P+G+ A+G
Sbjct: 94 PLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATG 153
Query: 119 CMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLH 178
D K+W + C HT++GHT I + F P V +G D K+WD+ G+ ++
Sbjct: 154 SFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVY 213
Query: 179 DFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDG 238
+ H I S+ F+ + TGS D TV WD +T + + + +F+ D
Sbjct: 214 TLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDC 273
Query: 239 RTLFSG-FDDNLKVYSWEPVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWVAD 296
+ +G D K++ C ++ + D C + GKL+ + + I+ A
Sbjct: 274 SLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAA 333
Query: 297 VSHVEPYGVGAPEPDQSICTEVKFNPPGSHSL 328
+ E + +++ FNP G+H L
Sbjct: 334 TRKC----IAKLEGHEGEISKISFNPQGNHLL 361
Score = 278 (102.9 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 65/208 (31%), Positives = 102/208 (49%)
Query: 6 YKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVA 65
Y + AH + +++ K F ITG D+ LW L +L G + V ++A
Sbjct: 83 YLFKVLKAHILPLTNVALNKSGSCF-ITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIA 141
Query: 66 FDSAEVLVLA-GASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
F++ +A G+ KLW +E K T GH + + F+P A+G MDT
Sbjct: 142 FNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTA 201
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
K+WDI+ ++T +GH+ I ++ F G +++G FD+ V VWD G+ ++ H
Sbjct: 202 KLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHC 261
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWD 212
I S F+ L+ TGS D+T K WD
Sbjct: 262 AEISSASFNWDCSLILTGSMDKTCKLWD 289
Score = 277 (102.6 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 60/238 (25%), Positives = 109/238 (45%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAE 70
F H+A + C+S ++ + TG D LW I + +L G S+ + S++F+++
Sbjct: 173 FRGHTAEIVCLSFNPQST-LVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSG 231
Query: 71 VLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
++ G+ + +WD + + V L GH + ++ F+ +G MD K+WD
Sbjct: 232 DRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDAT 291
Query: 131 KKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSI 190
C+ T GH I F G+ + + D +++ K + + HEG I I
Sbjct: 292 NGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKI 351
Query: 191 DFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN 248
F+P L TGS+D+T + WD +T + + + + F+ G + +G DN
Sbjct: 352 SFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDN 409
Score = 256 (95.2 bits), Expect = 7.8e-19, P = 7.8e-19
Identities = 62/243 (25%), Positives = 105/243 (43%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G +L H V I+ + TG D+ LW++ + G ++ + +
Sbjct: 124 GEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCL 183
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
+F+ LV G+ KLWD++ + V TL GH + ++ F+ G+ +G D +
Sbjct: 184 SFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTV 243
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
+WD ++ GH I++ F D +++G D K+WD T GK + H+
Sbjct: 244 VVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHD 303
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG 244
I F L+AT SAD T + + T + I + I+F+P G L +G
Sbjct: 304 DEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTG 363
Query: 245 FDD 247
D
Sbjct: 364 SSD 366
Score = 247 (92.0 bits), Expect = 8.6e-18, P = 8.6e-18
Identities = 60/209 (28%), Positives = 92/209 (44%)
Query: 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
+ G ++ HSA + +S R +ITG D V +W + L G + +
Sbjct: 207 QNGEEVYTLRGHSAEIISLSFNTSGDR-IITGSFDHTVVVWDADTGRKVNILIGHCAEIS 265
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
S +F+ L+L G+ KLWD K V TLTGH F G+ A+ D
Sbjct: 266 SASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADG 325
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
+I+ + CI +GH I+ I F P G +++G D ++WD G+ L +
Sbjct: 326 TARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEG 385
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFW 211
H I S F+ ++ TGS D T + W
Sbjct: 386 HTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 230 (86.0 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 49/163 (30%), Positives = 79/163 (48%)
Query: 92 MVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFT 151
+ + L H T V + G F +G D K+WD ++T +GH + I F
Sbjct: 84 LFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFN 143
Query: 152 -PDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
P G + +G FD K+W + GK H F+ H I + F+P L+ATGS D T K
Sbjct: 144 NPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKL 203
Query: 211 WDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVY 252
WD++ E + + R + +++F+ G + +G FD + V+
Sbjct: 204 WDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVW 246
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 280 (103.6 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 60/217 (27%), Positives = 111/217 (51%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G L+ HS V C + ++ +++G D+ V +W + L +L S PV +V
Sbjct: 146 GKSLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAV 204
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTA-VEFHPFGEFFASGCMDTN 123
F+ L+++ + G+ ++WD + ++TL + + V+F P G++ + +D
Sbjct: 205 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 264
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTI--RFT-PDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
LK+WD K C+ TY GH I F+ G+W+VSG DN+V +W+L + +++
Sbjct: 265 LKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKL 324
Query: 181 KFHEGHIRSIDFHPLEFLLATGSA--DRTVKFWDLET 215
+ H + HP E ++A+ + D+T+K W +T
Sbjct: 325 QGHTDTVLCTACHPTENIIASAALENDKTIKLWKSDT 361
Score = 272 (100.8 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 64/258 (24%), Positives = 121/258 (46%)
Query: 3 KRGYKLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
K Y L+ +A H+ V+ + +L + D+ + +W ++ G +
Sbjct: 59 KPNYTLKFTLAGHTKAVSAVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 117
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
VA+ S L+++G+ +K+W+L K ++TL GH + F+P SG D
Sbjct: 118 SDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 177
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+++IWD+R C+ T H+ ++ + F DG +VS +D + ++WD +G+ L
Sbjct: 178 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 237
Query: 182 FHEGH-IRSIDFHPL-EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAI--TFH-P 236
+ + + F P +++LA + D T+K WD + + + + I F
Sbjct: 238 DDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 296
Query: 237 DGRTLFSGFDDNLKVYSW 254
G+ + SG +DN+ VY W
Sbjct: 297 GGKWIVSGSEDNM-VYIW 313
Score = 258 (95.9 bits), Expect = 7.9e-20, P = 7.9e-20
Identities = 61/256 (23%), Positives = 121/256 (47%)
Query: 7 KLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVA 65
K ++ ++ H ++ ++ + R L++G DD+ + +W + +L +L G S+ V
Sbjct: 105 KFEKTISGHKLGISDVAWSSDS-RLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCN 163
Query: 66 FDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLK 125
F+ L+++G+ +++WD+ K ++TL H +AV F+ G S D +
Sbjct: 164 FNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 223
Query: 126 IWDIRKKGCIHTY-KGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
IWD C+ T ++ ++F+P+G+++++ DN +K+WD + GK L + H+
Sbjct: 224 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 283
Query: 185 GHIRSIDFHPLEFL----LATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
I F + +GS D V W+L++ E++ + V HP
Sbjct: 284 NEKYCI-FANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENI 342
Query: 241 LFSGFDDNLKVYS-WE 255
+ S +N K W+
Sbjct: 343 IASAALENDKTIKLWK 358
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 295 (108.9 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 77/252 (30%), Positives = 109/252 (43%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
R Y+ +V H V + L + D+ V LW K ++PV S
Sbjct: 52 RAYR---YVGHKDVVTSVQFSPHG-NLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRS 107
Query: 64 VAFDSAEVLVLAGASTGV-IKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
V F SA+ LA AS IK+W + + + +L H +F P G S D
Sbjct: 108 VDF-SADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 166
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
+KIWD K C++ + N + F P G + S G D VKVWD+ KLL ++
Sbjct: 167 TIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQV 226
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLF 242
H G + I FHP + L T S+D T+K DL LI + + V ++F G
Sbjct: 227 HSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFA 286
Query: 243 SGFDDNLKVYSW 254
SG D +V W
Sbjct: 287 SGGADT-QVLLW 297
Score = 280 (103.6 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 65/243 (26%), Positives = 116/243 (47%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTA-LMSLCGLSSPVDSVAFDSA 69
F H A + + + + L T D + LW KP A G V SV F
Sbjct: 14 FKGHKAAITSLDLSPNG-KQLATASWDTFLMLWNF-KPHARAYRYVGHKDVVTSVQFSPH 71
Query: 70 EVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI 129
L+ + + ++LW ++ H + +V+F G+F A+ D ++K+W +
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
++ +++ HT + +F+PDGR +VS D +K+WD T + +++F G
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 191
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHP-DGRTLFSGFDDN 248
+DF+P +A+ +D+TVK WD+ +L+ + GV+ I+FHP D + + D
Sbjct: 192 VDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGT 251
Query: 249 LKV 251
LK+
Sbjct: 252 LKI 254
Score = 276 (102.2 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 63/216 (29%), Positives = 103/216 (47%)
Query: 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
KRG K EF AH+A V + +FL T +D+ + +W++ + L SL + V
Sbjct: 91 KRG-KFSEFKAHTAPVRSVDFSADG-QFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVR 148
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
F L+++ + IK+WD + V + V+F+P G AS D
Sbjct: 149 CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQ 208
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
+K+WD+R + Y+ H+ G+N I F P ++V+ D +K+ DL G+L++ +
Sbjct: 209 TVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQG 268
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFEL 218
H G + ++ F L A+G AD V W EL
Sbjct: 269 HTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDEL 304
Score = 220 (82.5 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 54/209 (25%), Positives = 96/209 (45%)
Query: 88 EESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINT 147
E+ + R GHK+ T+++ P G+ A+ DT L +W+ + + Y GH + +
Sbjct: 6 EDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTS 65
Query: 148 IRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRT 207
++F+P G + S D V++W +FK H +RS+DF LAT S D++
Sbjct: 66 VQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKS 125
Query: 208 VKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN-LKVYSWEPVICHD--SVD 264
+K W + + S V F PDGR + S +D +K++ C + S
Sbjct: 126 IKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDS 185
Query: 265 MGWSTLGDLCINDGKLLGCSFYRNSVGIW 293
+G++ D + G + + +V +W
Sbjct: 186 VGFANFVDFNPS-GTCIASAGSDQTVKVW 213
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 279 (103.3 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 70/217 (32%), Positives = 108/217 (49%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
HS V + I +F ++G D + LW I K + G + V SVAF S +
Sbjct: 69 HSHFVQDVVISHDG-QFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQI 127
Query: 74 LAGASTGVIKLWD-LEESKMVRTLTG---HKSNCTAVEFHPFGEFFASGCMDTNLKIWDI 129
++G+ IK+W+ L E K TL G H+ + + F P SG D +KIWDI
Sbjct: 128 ISGSRDATIKVWNTLGECKF--TLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDI 185
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
+ C HT HT +NT+ +PDG SGG D +W+L++GK L+ + I +
Sbjct: 186 KSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNT-INA 244
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEV 226
+ F P ++ L+ + D+ + WDL T +++ PEV
Sbjct: 245 LAFSPNKYWLSAATDDKII-IWDLLTKQVLAEIVPEV 280
Score = 257 (95.5 bits), Expect = 9.1e-21, P = 9.1e-21
Identities = 69/254 (27%), Positives = 116/254 (45%)
Query: 12 VAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPT-------ALMSLCGLSSPVDSV 64
V H+ V I++ + +I+ D+ V +W + PT A SL G S V V
Sbjct: 18 VGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQL-TPTDATSPGKAHRSLKGHSHFVQDV 76
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
L+G+ ++LWD+ + R GH + +V F SG D +
Sbjct: 77 VISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATI 136
Query: 125 KIWDIRKKGCIHTYKG---HTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
K+W+ + C T +G H ++ IRF+P+ +VSG +DN VK+WD+ + K H
Sbjct: 137 KVWNTLGE-CKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLT 195
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTL 241
H G++ ++ P L A+G D W+L + + + T ++A+ F P+ L
Sbjct: 196 DHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNT-INALAFSPNKYWL 254
Query: 242 FSGFDDNLKVYSWE 255
+ DD K+ W+
Sbjct: 255 SAATDD--KIIIWD 266
Score = 241 (89.9 bits), Expect = 9.4e-19, P = 9.4e-19
Identities = 65/214 (30%), Positives = 100/214 (46%)
Query: 53 SLCGLSSPVDSVAFDSAEV-LVLAGASTGVIKLWDLEES------KMVRTLTGHKSNCTA 105
SL G + V S+A +++ + + +W L + K R+L GH
Sbjct: 16 SLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQD 75
Query: 106 VEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNV 165
V G+F SG D L++WDI K +KGHT+ + ++ F+ D R ++SG D
Sbjct: 76 VVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDAT 135
Query: 166 VKVWDLTAGKLLHDFKFHEGH---IRSIDFHPLEFLLATGSADRTVKFWDLETFELIGST 222
+KVW+ T G+ + E H + I F P + +GS D VK WD+++F+ T
Sbjct: 136 IKVWN-TLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKC-NHT 193
Query: 223 RPEVTG-VHAITFHPDGRTLFSGFDDNLKVYSWE 255
+ TG V+ +T PDG SG D WE
Sbjct: 194 LTDHTGYVNTVTISPDGSLCASGGKDTFACL-WE 226
Score = 179 (68.1 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 46/171 (26%), Positives = 82/171 (47%)
Query: 99 HKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVV 158
H+ + + F P SG D +KIWDI+ C HT HT +NT+ +PDG
Sbjct: 155 HQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCA 214
Query: 159 SGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET--- 215
SGG D +W+L++GK L+ + I ++ F P ++ L+ + D+ + + L
Sbjct: 215 SGGKDTFACLWELSSGKPLYKLEARNT-INALAFSPNKYWLSAATDDKIIIWDLLTKQVL 273
Query: 216 FELIGS-------------TRPEVTGVHAITFHPDGRTLFSGFDDNL-KVY 252
E++ ++P+ ++ + DG L++G++D L +VY
Sbjct: 274 AEIVPEVKEQAFDSKKKKESKPKAPACLSLAWSADGSVLYAGYNDGLIRVY 324
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 278 (102.9 bits), Expect = 5.2e-23, P = 5.2e-23
Identities = 77/259 (29%), Positives = 121/259 (46%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G + HS +N +SI F ++G D V LW + + S G +S V SV
Sbjct: 62 GTAKKSLTGHSQAINDVSISSDGL-FALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSV 120
Query: 65 AFDSAEVLVLAGASTGVIKLWD-LEESKMVRTLTGHKSNCTAVEFHPF-GEFFASGC-MD 121
+F +++ + IKLW+ L + K T H T V F P + C D
Sbjct: 121 SFSPDNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWD 180
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+K+W+++ +GHT +NT+ +PDG SGG D V K+WD+ GK H +
Sbjct: 181 KLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGK--HLYS 238
Query: 182 FHEGH-IRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRP---EVTGVH---AITF 234
G I S+ F P ++ L + DR ++ W+LE+ +I P GV ++T+
Sbjct: 239 LETGSTINSLCFSPCDYWLCAAT-DRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTW 297
Query: 235 HPDGRTLFSGFDD-NLKVY 252
+G+ L+ G D N+ VY
Sbjct: 298 SANGQLLYCGSTDGNIYVY 316
Score = 244 (91.0 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 72/271 (26%), Positives = 130/271 (47%)
Query: 31 LITGGDDQKVNLWAIGKP-------TALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIK 83
+++ D+K+ +W I TA SL G S ++ V+ S + L+G+ ++
Sbjct: 38 IVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVR 97
Query: 84 LWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTY--KGH 141
LWDL + +R+ GH S+ +V F P S D +K+W+ + C +T + H
Sbjct: 98 LWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQ-CKYTITDQQH 156
Query: 142 TRGINTIRFTPDGRW--VVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLL 199
T I +RF+P +VS G+D +VKVW+L L + + H G + ++ P L
Sbjct: 157 TDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLC 216
Query: 200 ATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEP-VI 258
A+G D K WD++ + + S T ++++ F P L + D +++++ E +I
Sbjct: 217 ASGGKDGVAKLWDVKEGKHLYSLETGST-INSLCFSPCDYWLCAATDRFIRIWNLESKLI 275
Query: 259 CHDSVDMGWSTLG-DLCIN-----DGKLLGC 283
+ + S +G C + +G+LL C
Sbjct: 276 ISEIYPVKQSKIGVPWCTSLTWSANGQLLYC 306
Score = 206 (77.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 63/238 (26%), Positives = 109/238 (45%)
Query: 94 RTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPD 153
++LTGH V G F SG D ++++WD+ I ++ GHT + ++ F+PD
Sbjct: 66 KSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPD 125
Query: 154 GRWVVSGGFDNVVKVWDLTAG-KLLHDFKFHEGHIRSIDFHPL--EFLLATGSADRTVKF 210
R +VS D +K+W+ A K + H I + F P + ++ + D+ VK
Sbjct: 126 NRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKV 185
Query: 211 WDLETFELIGSTRPEVTGV-HAITFHPDGRTLFSGFDDNL-KVYSWEPVICHDSVDMGWS 268
W+L+ +L + TGV + +T PDG SG D + K++ + S++ G S
Sbjct: 186 WNLKNCDLNKNLEGH-TGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETG-S 243
Query: 269 TLGDLCINDGKLLGCSFYRNSVGIWVADVSHV--EPYGVGAPEPDQSICTEVKFNPPG 324
T+ LC + C+ + IW + + E Y V + CT + ++ G
Sbjct: 244 TINSLCFSPCDYWLCAATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANG 301
Score = 172 (65.6 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 56/233 (24%), Positives = 101/233 (43%)
Query: 98 GHKSNCTAVEF--HPFGEFFASGCMDTNLKIWDIRK---KGCIHTYK----GHTRGINTI 148
GH T+V P + S D L +W+I G I T K GH++ IN +
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTV 208
+ DG + +SG +D+ V++WDL+ G+ + F H + S+ F P + + S D+T+
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTI 138
Query: 209 KFWD-LETFELIGSTRPEVTGVHAITFHPDGRTLF---SGFDDNLKVYSWEPVICHDSVD 264
K W+ L + + + + + F P G+D +KV++ + + +++
Sbjct: 139 KLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLE 198
Query: 265 MGWSTLGDLCIN-DGKLLGCSFYRNSVGIW-VADVSHVEPYGVGAPEPDQSIC 315
L + I+ DG L +W V + H+ Y + S+C
Sbjct: 199 GHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHL--YSLETGSTINSLC 249
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 278 (102.9 bits), Expect = 5.2e-23, P = 5.2e-23
Identities = 77/259 (29%), Positives = 121/259 (46%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G + HS +N +SI F ++G D V LW + + S G +S V SV
Sbjct: 62 GTAKKSLTGHSQAINDVSISSDGL-FALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSV 120
Query: 65 AFDSAEVLVLAGASTGVIKLWD-LEESKMVRTLTGHKSNCTAVEFHPF-GEFFASGC-MD 121
+F +++ + IKLW+ L + K T H T V F P + C D
Sbjct: 121 SFSPDNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWD 180
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+K+W+++ +GHT +NT+ +PDG SGG D V K+WD+ GK H +
Sbjct: 181 KLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGK--HLYS 238
Query: 182 FHEGH-IRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRP---EVTGVH---AITF 234
G I S+ F P ++ L + DR ++ W+LE+ +I P GV ++T+
Sbjct: 239 LETGSTINSLCFSPCDYWLCAAT-DRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTW 297
Query: 235 HPDGRTLFSGFDD-NLKVY 252
+G+ L+ G D N+ VY
Sbjct: 298 SANGQLLYCGSTDGNIYVY 316
Score = 244 (91.0 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 72/271 (26%), Positives = 130/271 (47%)
Query: 31 LITGGDDQKVNLWAIGKP-------TALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIK 83
+++ D+K+ +W I TA SL G S ++ V+ S + L+G+ ++
Sbjct: 38 IVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVR 97
Query: 84 LWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTY--KGH 141
LWDL + +R+ GH S+ +V F P S D +K+W+ + C +T + H
Sbjct: 98 LWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQ-CKYTITDQQH 156
Query: 142 TRGINTIRFTPDGRW--VVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLL 199
T I +RF+P +VS G+D +VKVW+L L + + H G + ++ P L
Sbjct: 157 TDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLC 216
Query: 200 ATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEP-VI 258
A+G D K WD++ + + S T ++++ F P L + D +++++ E +I
Sbjct: 217 ASGGKDGVAKLWDVKEGKHLYSLETGST-INSLCFSPCDYWLCAATDRFIRIWNLESKLI 275
Query: 259 CHDSVDMGWSTLG-DLCIN-----DGKLLGC 283
+ + S +G C + +G+LL C
Sbjct: 276 ISEIYPVKQSKIGVPWCTSLTWSANGQLLYC 306
Score = 206 (77.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 63/238 (26%), Positives = 109/238 (45%)
Query: 94 RTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPD 153
++LTGH V G F SG D ++++WD+ I ++ GHT + ++ F+PD
Sbjct: 66 KSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPD 125
Query: 154 GRWVVSGGFDNVVKVWDLTAG-KLLHDFKFHEGHIRSIDFHPL--EFLLATGSADRTVKF 210
R +VS D +K+W+ A K + H I + F P + ++ + D+ VK
Sbjct: 126 NRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKV 185
Query: 211 WDLETFELIGSTRPEVTGV-HAITFHPDGRTLFSGFDDNL-KVYSWEPVICHDSVDMGWS 268
W+L+ +L + TGV + +T PDG SG D + K++ + S++ G S
Sbjct: 186 WNLKNCDLNKNLEGH-TGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETG-S 243
Query: 269 TLGDLCINDGKLLGCSFYRNSVGIWVADVSHV--EPYGVGAPEPDQSICTEVKFNPPG 324
T+ LC + C+ + IW + + E Y V + CT + ++ G
Sbjct: 244 TINSLCFSPCDYWLCAATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANG 301
Score = 172 (65.6 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 56/233 (24%), Positives = 101/233 (43%)
Query: 98 GHKSNCTAVEF--HPFGEFFASGCMDTNLKIWDIRK---KGCIHTYK----GHTRGINTI 148
GH T+V P + S D L +W+I G I T K GH++ IN +
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTV 208
+ DG + +SG +D+ V++WDL+ G+ + F H + S+ F P + + S D+T+
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTI 138
Query: 209 KFWD-LETFELIGSTRPEVTGVHAITFHPDGRTLF---SGFDDNLKVYSWEPVICHDSVD 264
K W+ L + + + + + F P G+D +KV++ + + +++
Sbjct: 139 KLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLE 198
Query: 265 MGWSTLGDLCIN-DGKLLGCSFYRNSVGIW-VADVSHVEPYGVGAPEPDQSIC 315
L + I+ DG L +W V + H+ Y + S+C
Sbjct: 199 GHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHL--YSLETGSTINSLC 249
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 289 (106.8 bits), Expect = 5.2e-23, P = 5.2e-23
Identities = 63/244 (25%), Positives = 108/244 (44%)
Query: 9 QEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDS 68
+ F H V + + L +G D + +W + T G V V F
Sbjct: 13 RHFKGHRDAVTSVDFSLNT-KQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSP 71
Query: 69 AEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWD 128
+ L+ +G+ +++W H + +V F G+ F + D +K+W
Sbjct: 72 SGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWS 131
Query: 129 IRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIR 188
++ + + H + +F+PDGR +VS D VK+WD T+ + +H + H G +
Sbjct: 132 THRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVT 191
Query: 189 SIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN 248
+DFHP +A D TVK WD+ T L+ + V+A++FHP G L + D+
Sbjct: 192 YVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDS 251
Query: 249 -LKV 251
LK+
Sbjct: 252 TLKI 255
Score = 285 (105.4 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 70/263 (26%), Positives = 110/263 (41%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
R Y+ F H V C++ L +G D+ V +W ++ V S
Sbjct: 53 RAYR---FAGHKDAVTCVNFSPSG-HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRS 108
Query: 64 VAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN 123
V F S + + +K+W K + +L+ H + +F P G S D
Sbjct: 109 VHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKT 168
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
+K+WD + C+H+Y H + + F P G + + G DN VKVWD+ +LL ++ H
Sbjct: 169 VKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLH 228
Query: 184 EGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS 243
+ ++ FHP L T S+D T+K DL L+ + + F G S
Sbjct: 229 SAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 288
Query: 244 GFDDNLKVYSWEPVICHDSVDMG 266
G D +V W+ D VD G
Sbjct: 289 GGSDE-QVMVWKSNF--DIVDYG 308
Score = 218 (81.8 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 57/210 (27%), Positives = 92/210 (43%)
Query: 88 EESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINT 147
E+ + R GH+ T+V+F + ASG MD+ L +W ++ + + + GH +
Sbjct: 7 EDPSLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTC 66
Query: 148 IRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRT 207
+ F+P G + SG D V++W F+ H +RS+ F T S D+T
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 126
Query: 208 VKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVI--C-HDSVD 264
VK W + + S + V F PDGR + S DD V W+ C H +
Sbjct: 127 VKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKT-VKLWDKTSRECVHSYCE 185
Query: 265 MG-WSTLGDLCINDGKLLGCSFYRNSVGIW 293
G + T D + G + + N+V +W
Sbjct: 186 HGGFVTYVDFHPS-GTCIAAAGMDNTVKVW 214
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 284 (105.0 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 61/244 (25%), Positives = 108/244 (44%)
Query: 9 QEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDS 68
+ F H V C+ + L +G D + +W + + G V V F
Sbjct: 13 RHFKGHRDAVTCVDFSINT-KQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP 71
Query: 69 AEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWD 128
+ L+ +G+ +++W H + +V F G+ F + D +K+W
Sbjct: 72 SGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWA 131
Query: 129 IRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIR 188
++ + + H + +F+PDGR +VS D VK+WD ++ + +H + H G +
Sbjct: 132 THRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVT 191
Query: 189 SIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN 248
+DFHP +A D TVK WD+ T L+ + V+ ++FHP G L + D+
Sbjct: 192 YVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDS 251
Query: 249 -LKV 251
LK+
Sbjct: 252 TLKI 255
Score = 280 (103.6 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 70/263 (26%), Positives = 109/263 (41%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
R Y+ F H V C++ L +G D+ V +W ++ V S
Sbjct: 53 RAYR---FTGHKDAVTCVNFSPSG-HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRS 108
Query: 64 VAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN 123
V F S + + +K+W K + +L+ H + +F P G S D
Sbjct: 109 VHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKT 168
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
+K+WD + C+H+Y H + + F P G + + G DN VKVWD+ +LL ++ H
Sbjct: 169 VKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLH 228
Query: 184 EGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS 243
+ + FHP L T S+D T+K DL L+ + + F G S
Sbjct: 229 SAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 288
Query: 244 GFDDNLKVYSWEPVICHDSVDMG 266
G D +V W+ D VD G
Sbjct: 289 GGSDE-QVMVWKSNF--DIVDHG 308
Score = 279 (103.3 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 63/219 (28%), Positives = 104/219 (47%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAE 70
F AH+A V + F +T DD+ V +WA + L SL + V F
Sbjct: 99 FRAHTATVRSVHFCSDGQSF-VTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDG 157
Query: 71 VLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
L+++ + +KLWD + V + H T V+FHP G A+ MD +K+WD+R
Sbjct: 158 RLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 217
Query: 131 KKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSI 190
+ Y+ H+ +N + F P G ++++ D+ +K+ DL G+LL+ H+G ++
Sbjct: 218 THRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTV 277
Query: 191 DFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGV 229
F A+G +D V W F+++ EVT V
Sbjct: 278 AFSRTGEYFASGGSDEQVMVWK-SNFDIVD--HGEVTKV 313
Score = 218 (81.8 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 56/209 (26%), Positives = 92/209 (44%)
Query: 88 EESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINT 147
E+ + R GH+ T V+F + ASG MD+ L +W ++ + + + GH +
Sbjct: 7 EDPSLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 66
Query: 148 IRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRT 207
+ F+P G + SG D V++W F+ H +RS+ F T S D+T
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 126
Query: 208 VKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN-LKVYSWEPVIC-HDSVDM 265
VK W + + S + V F PDGR + S DD +K++ C H +
Sbjct: 127 VKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEH 186
Query: 266 G-WSTLGDLCINDGKLLGCSFYRNSVGIW 293
G + T D + G + + N+V +W
Sbjct: 187 GGFVTYVDFHPS-GTCIAAAGMDNTVKVW 214
Score = 46 (21.3 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 364 KPVASQKIGPLNSPKV---VPPLDSEEISDLQTEKQNPAIGVPE 404
+P A+ N P+V VPP + +Q++ Q P + VP+
Sbjct: 315 RPPATLASSMGNLPEVDFPVPPGRGRSVESVQSQPQEP-VSVPQ 357
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 296 (109.3 bits), Expect = 5.6e-23, Sum P(2) = 5.6e-23
Identities = 67/227 (29%), Positives = 108/227 (47%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAE 70
F AH+A+V + + R L+T DD+ V +W + + L SL ++ V F
Sbjct: 98 FKAHTASVRSVHFSRDGQR-LVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDG 156
Query: 71 VLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
L+ + ++LWD + + T + + T V+F+ G AS D +KIWDIR
Sbjct: 157 RLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIR 216
Query: 131 KKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSI 190
I YK H G+N F P G +++SG D+ +K+ DL G+L++ H+G + ++
Sbjct: 217 TNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTV 276
Query: 191 DFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPD 237
F L A+G AD V W F+ + E+ H+ PD
Sbjct: 277 TFSRDGDLFASGGADSQVLMWKTN-FDSLNYR--ELLSKHSKRVTPD 320
Score = 296 (109.3 bits), Expect = 5.6e-23, Sum P(2) = 5.6e-23
Identities = 62/244 (25%), Positives = 114/244 (46%)
Query: 9 QEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDS 68
+ F H ++C + L TG D+ + +W + G + + V F
Sbjct: 12 RHFKGHKDVISCADFNPNN-KQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAP 70
Query: 69 AEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWD 128
+ LV + + ++LW H ++ +V F G+ + D ++K+W
Sbjct: 71 SGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWG 130
Query: 129 IRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIR 188
+ +K +++ HT + RF+PDGR + S G D V++WD ++ + ++ F + G
Sbjct: 131 VERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSAT 190
Query: 189 SIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN 248
+DF+ +A+ AD T+K WD+ T +LI + GV+ +FHP G L SG D+
Sbjct: 191 FVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDS 250
Query: 249 -LKV 251
+K+
Sbjct: 251 TIKI 254
Score = 266 (98.7 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 71/249 (28%), Positives = 110/249 (44%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLW--AI-GKPTALMSLCGLSSPVDSVAFD 67
FV H+ + ++ + + DQ V LW +I G+ T + ++ V SV F
Sbjct: 56 FVGHTDVITGVNFAPSGS-LVASSSRDQTVRLWTPSIKGESTVFKAH---TASVRSVHFS 111
Query: 68 -SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKI 126
+ LV A V K+W +E K + +L H + F P G AS D +++
Sbjct: 112 RDGQRLVTASDDKSV-KVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRL 170
Query: 127 WDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGH 186
WD CI+ + + + F G + S G DN +K+WD+ KL+ +K H
Sbjct: 171 WDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAG 230
Query: 187 IRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFD 246
+ FHP L +GS+D T+K DL LI + V +TF DG SG
Sbjct: 231 VNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGA 290
Query: 247 DNLKVYSWE 255
D+ +V W+
Sbjct: 291 DS-QVLMWK 298
Score = 228 (85.3 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 61/212 (28%), Positives = 94/212 (44%)
Query: 87 LEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGIN 146
+E+ + R GHK + +F+P + A+G D +L IW++ K + GHT I
Sbjct: 5 MEDPTLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVIT 64
Query: 147 TIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADR 206
+ F P G V S D V++W + FK H +RS+ F L T S D+
Sbjct: 65 GVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDK 124
Query: 207 TVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVICHDSVDM- 265
+VK W +E + + S V F PDGR + S DD V W+ H +++
Sbjct: 125 SVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRT-VRLWD-TSSHQCINIF 182
Query: 266 ----GWSTLGDLCINDGKLLGCSFYRNSVGIW 293
G +T D + G + S N++ IW
Sbjct: 183 TDYGGSATFVDFN-SSGTCIASSGADNTIKIW 213
Score = 221 (82.9 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 53/206 (25%), Positives = 86/206 (41%)
Query: 48 PTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVE 107
PT G + F+ + G+ + +W+L GH T V
Sbjct: 8 PTLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVN 67
Query: 108 FHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVK 167
F P G AS D +++W KG +K HT + ++ F+ DG+ +V+ D VK
Sbjct: 68 FAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVK 127
Query: 168 VWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVT 227
VW + K L+ H +R F P L+A+ DRTV+ WD + + I
Sbjct: 128 VWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGG 187
Query: 228 GVHAITFHPDGRTLFS-GFDDNLKVY 252
+ F+ G + S G D+ +K++
Sbjct: 188 SATFVDFNSSGTCIASSGADNTIKIW 213
Score = 45 (20.9 bits), Expect = 5.6e-23, Sum P(2) = 5.6e-23
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 764 SRLNSREDQSTNTPSQTIVNGAENKATKTPTQMRLKSSENQ-------VTSTPP-RARLN 815
S ++R ++ +G ++ +T TQ R + ENQ +T++P R+ +
Sbjct: 367 STTDARNYDGASSSRAQFTSGMDSGPFRTHTQAREEEDENQEERFAGGMTASPAERSGIP 426
Query: 816 SSIEGQATNI 825
SS+ NI
Sbjct: 427 SSLTSTLENI 436
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 297 (109.6 bits), Expect = 5.7e-23, P = 5.7e-23
Identities = 68/252 (26%), Positives = 121/252 (48%)
Query: 6 YKLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
+KL ++ H V I++ + ++ +TG D+ + +W + +SL G S V V
Sbjct: 198 WKLYRVISGHLGWVRSIAV-EPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 256
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
A + + + +K WDLE +K++R GH S ++ HP + + D
Sbjct: 257 AVSNRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATA 316
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRF-TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
++WDIR K +HT GHT + T++ + + + V G D +++WDL AGK H
Sbjct: 317 RVWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRATLTNH 376
Query: 184 EGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS 243
+ +R++ HP ++ A+GS D +K W I + ++ + + DG L S
Sbjct: 377 KKSVRALVLHPRQYTFASGSPDN-IKQWKFPDGNFIQNLSGHNAIINTLAVNSDG-VLVS 434
Query: 244 GFDDNLKVYSWE 255
G D N ++ W+
Sbjct: 435 GAD-NGTIHMWD 445
Score = 215 (80.7 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 60/238 (25%), Positives = 99/238 (41%)
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
V S+A + + G++ IK+WDL K+ +LTGH S V + S
Sbjct: 211 VRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSNRSPYLFSCGE 270
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
D +K WD+ I Y GH + + P +V+ D +VWD+ +H
Sbjct: 271 DKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDIRTKANVHTL 330
Query: 181 KFHEGHIRSIDFHPLEFLLAT-GSADRTVKFWDLETFELIGSTRPEVTG----VHAITFH 235
H + ++ E + T GS D T++ WDL + G TR +T V A+ H
Sbjct: 331 SGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDL----VAGKTRATLTNHKKSVRALVLH 386
Query: 236 PDGRTLFSGFDDNLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIW 293
P T SG DN+K + + ++ + + L +N +L ++ +W
Sbjct: 387 PRQYTFASGSPDNIKQWKFPDGNFIQNLSGHNAIINTLAVNSDGVLVSGADNGTIHMW 444
Score = 202 (76.2 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 63/193 (32%), Positives = 87/193 (45%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEV-LVLAGASTGVIKLWDLEE 89
L+T D +W I + +L G ++ V +V SAE +V G+ I+LWDL
Sbjct: 307 LVTCSRDATARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVA 366
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
K TLT HK + A+ HP FASG D N+K W I GH INT+
Sbjct: 367 GKTRATLTNHKKSVRALVLHPRQYTFASGSPD-NIKQWKFPDGNFIQNLSGHNAIINTLA 425
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF-KFH----------EGHIRSIDFHPLEFL 198
DG +VSG + + +WD G ++F + H E I S F E
Sbjct: 426 VNSDGV-LVSGADNGTIHMWDWRTG---YNFQRIHAAVQPGSLDSESGIFSCVFDQSESR 481
Query: 199 LATGSADRTVKFW 211
L T AD+T+K +
Sbjct: 482 LITAEADKTIKVY 494
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 276 (102.2 bits), Expect = 8.5e-23, P = 8.5e-23
Identities = 60/213 (28%), Positives = 109/213 (51%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G L+ HS V C + ++ +++G D+ V +W + L +L S PV +V
Sbjct: 93 GKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 151
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTA-VEFHPFGEFFASGCMDTN 123
F+ L+++ + G+ ++WD + ++TL + + V+F P G++ + +D
Sbjct: 152 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 211
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTI--RFT-PDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
LK+WD K C+ TY GH I F+ G+W+VSG DN+V +W+L +++
Sbjct: 212 LKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKL 271
Query: 181 KFHEGHIRSIDFHPLEFLLATGSA--DRTVKFW 211
+ H + S HP E ++A+ + D+T+K W
Sbjct: 272 QGHTDVVISTACHPTENIIASAALENDKTIKLW 304
Score = 267 (99.0 bits), Expect = 7.8e-22, P = 7.8e-22
Identities = 63/258 (24%), Positives = 120/258 (46%)
Query: 3 KRGYKLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
K Y L+ +A H+ V+ + +L + D+ + +W ++ G +
Sbjct: 6 KPNYALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 64
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
VA+ S L+++ + +K+WD+ K ++TL GH + F+P SG D
Sbjct: 65 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 124
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+++IWD++ C+ T H+ ++ + F DG +VS +D + ++WD +G+ L
Sbjct: 125 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 184
Query: 182 FHEGH-IRSIDFHPL-EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAI--TFH-P 236
+ + + F P +++LA + D T+K WD + + + + I F
Sbjct: 185 DDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 243
Query: 237 DGRTLFSGFDDNLKVYSW 254
G+ + SG +DNL VY W
Sbjct: 244 GGKWIVSGSEDNL-VYIW 260
Score = 262 (97.3 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 69/258 (26%), Positives = 115/258 (44%)
Query: 47 KPT-AL-MSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCT 104
KP AL +L G + V SV F + + ++ +IK+W + K +T++GHK +
Sbjct: 6 KPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 65
Query: 105 AVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDN 164
V + S D LKIWD+ C+ T KGH+ + F P +VSG FD
Sbjct: 66 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 125
Query: 165 VVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFE----LIG 220
V++WD+ GK L H + ++ F+ L+ + S D + WD + + LI
Sbjct: 126 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 185
Query: 221 STRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEPVICHDSV----DMGWSTLGDLCI 275
P V+ V F P+G+ + + D+ LK++ + C + + + + +
Sbjct: 186 DDNPPVSFVK---FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV 242
Query: 276 NDGKLLGCSFYRNSVGIW 293
GK + N V IW
Sbjct: 243 TGGKWIVSGSEDNLVYIW 260
Score = 254 (94.5 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 60/256 (23%), Positives = 120/256 (46%)
Query: 7 KLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVA 65
K ++ ++ H ++ ++ + L++ DD+ + +W + L +L G S+ V
Sbjct: 52 KFEKTISGHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCN 110
Query: 66 FDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLK 125
F+ L+++G+ +++WD++ K ++TL H +AV F+ G S D +
Sbjct: 111 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 170
Query: 126 IWDIRKKGCIHTY-KGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
IWD C+ T ++ ++F+P+G+++++ DN +K+WD + GK L + H+
Sbjct: 171 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 230
Query: 185 GHIRSIDFHPLEFL----LATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
I F + +GS D V W+L+T E++ + V + HP
Sbjct: 231 NEKYCI-FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENI 289
Query: 241 LFSGFDDNLKVYS-WE 255
+ S +N K W+
Sbjct: 290 IASAALENDKTIKLWK 305
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 276 (102.2 bits), Expect = 8.5e-23, P = 8.5e-23
Identities = 60/213 (28%), Positives = 109/213 (51%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G L+ HS V C + ++ +++G D+ V +W + L +L S PV +V
Sbjct: 119 GKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 177
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTA-VEFHPFGEFFASGCMDTN 123
F+ L+++ + G+ ++WD + ++TL + + V+F P G++ + +D
Sbjct: 178 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTI--RFT-PDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
LK+WD K C+ TY GH I F+ G+W+VSG DN+V +W+L +++
Sbjct: 238 LKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKL 297
Query: 181 KFHEGHIRSIDFHPLEFLLATGSA--DRTVKFW 211
+ H + S HP E ++A+ + D+T+K W
Sbjct: 298 QGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 267 (99.0 bits), Expect = 7.8e-22, P = 7.8e-22
Identities = 63/258 (24%), Positives = 120/258 (46%)
Query: 3 KRGYKLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
K Y L+ +A H+ V+ + +L + D+ + +W ++ G +
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
VA+ S L+++ + +K+WD+ K ++TL GH + F+P SG D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+++IWD++ C+ T H+ ++ + F DG +VS +D + ++WD +G+ L
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 182 FHEGH-IRSIDFHPL-EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAI--TFH-P 236
+ + + F P +++LA + D T+K WD + + + + I F
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 269
Query: 237 DGRTLFSGFDDNLKVYSW 254
G+ + SG +DNL VY W
Sbjct: 270 GGKWIVSGSEDNL-VYIW 286
Score = 262 (97.3 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 69/258 (26%), Positives = 115/258 (44%)
Query: 47 KPT-AL-MSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCT 104
KP AL +L G + V SV F + + ++ +IK+W + K +T++GHK +
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 91
Query: 105 AVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDN 164
V + S D LKIWD+ C+ T KGH+ + F P +VSG FD
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 165 VVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFE----LIG 220
V++WD+ GK L H + ++ F+ L+ + S D + WD + + LI
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 221 STRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEPVICHDSV----DMGWSTLGDLCI 275
P V+ V F P+G+ + + D+ LK++ + C + + + + +
Sbjct: 212 DDNPPVSFVK---FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV 268
Query: 276 NDGKLLGCSFYRNSVGIW 293
GK + N V IW
Sbjct: 269 TGGKWIVSGSEDNLVYIW 286
Score = 254 (94.5 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 60/256 (23%), Positives = 120/256 (46%)
Query: 7 KLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVA 65
K ++ ++ H ++ ++ + L++ DD+ + +W + L +L G S+ V
Sbjct: 78 KFEKTISGHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCN 136
Query: 66 FDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLK 125
F+ L+++G+ +++WD++ K ++TL H +AV F+ G S D +
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 196
Query: 126 IWDIRKKGCIHTY-KGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
IWD C+ T ++ ++F+P+G+++++ DN +K+WD + GK L + H+
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 256
Query: 185 GHIRSIDFHPLEFL----LATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
I F + +GS D V W+L+T E++ + V + HP
Sbjct: 257 NEKYCI-FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENI 315
Query: 241 LFSGFDDNLKVYS-WE 255
+ S +N K W+
Sbjct: 316 IASAALENDKTIKLWK 331
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 276 (102.2 bits), Expect = 8.5e-23, P = 8.5e-23
Identities = 60/213 (28%), Positives = 109/213 (51%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G L+ HS V C + ++ +++G D+ V +W + L +L S PV +V
Sbjct: 119 GKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 177
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTA-VEFHPFGEFFASGCMDTN 123
F+ L+++ + G+ ++WD + ++TL + + V+F P G++ + +D
Sbjct: 178 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTI--RFT-PDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
LK+WD K C+ TY GH I F+ G+W+VSG DN+V +W+L +++
Sbjct: 238 LKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKL 297
Query: 181 KFHEGHIRSIDFHPLEFLLATGSA--DRTVKFW 211
+ H + S HP E ++A+ + D+T+K W
Sbjct: 298 QGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 267 (99.0 bits), Expect = 7.8e-22, P = 7.8e-22
Identities = 63/258 (24%), Positives = 120/258 (46%)
Query: 3 KRGYKLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
K Y L+ +A H+ V+ + +L + D+ + +W ++ G +
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
VA+ S L+++ + +K+WD+ K ++TL GH + F+P SG D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+++IWD++ C+ T H+ ++ + F DG +VS +D + ++WD +G+ L
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 182 FHEGH-IRSIDFHPL-EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAI--TFH-P 236
+ + + F P +++LA + D T+K WD + + + + I F
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 269
Query: 237 DGRTLFSGFDDNLKVYSW 254
G+ + SG +DNL VY W
Sbjct: 270 GGKWIVSGSEDNL-VYIW 286
Score = 262 (97.3 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 69/258 (26%), Positives = 115/258 (44%)
Query: 47 KPT-AL-MSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCT 104
KP AL +L G + V SV F + + ++ +IK+W + K +T++GHK +
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 91
Query: 105 AVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDN 164
V + S D LKIWD+ C+ T KGH+ + F P +VSG FD
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 165 VVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFE----LIG 220
V++WD+ GK L H + ++ F+ L+ + S D + WD + + LI
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 221 STRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEPVICHDSV----DMGWSTLGDLCI 275
P V+ V F P+G+ + + D+ LK++ + C + + + + +
Sbjct: 212 DDNPPVSFVK---FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV 268
Query: 276 NDGKLLGCSFYRNSVGIW 293
GK + N V IW
Sbjct: 269 TGGKWIVSGSEDNLVYIW 286
Score = 254 (94.5 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 60/256 (23%), Positives = 120/256 (46%)
Query: 7 KLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVA 65
K ++ ++ H ++ ++ + L++ DD+ + +W + L +L G S+ V
Sbjct: 78 KFEKTISGHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCN 136
Query: 66 FDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLK 125
F+ L+++G+ +++WD++ K ++TL H +AV F+ G S D +
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 196
Query: 126 IWDIRKKGCIHTY-KGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
IWD C+ T ++ ++F+P+G+++++ DN +K+WD + GK L + H+
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 256
Query: 185 GHIRSIDFHPLEFL----LATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
I F + +GS D V W+L+T E++ + V + HP
Sbjct: 257 NEKYCI-FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENI 315
Query: 241 LFSGFDDNLKVYS-WE 255
+ S +N K W+
Sbjct: 316 IASAALENDKTIKLWK 331
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 276 (102.2 bits), Expect = 8.5e-23, P = 8.5e-23
Identities = 60/213 (28%), Positives = 109/213 (51%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G L+ HS V C + ++ +++G D+ V +W + L +L S PV +V
Sbjct: 119 GKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 177
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTA-VEFHPFGEFFASGCMDTN 123
F+ L+++ + G+ ++WD + ++TL + + V+F P G++ + +D
Sbjct: 178 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTI--RFT-PDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
LK+WD K C+ TY GH I F+ G+W+VSG DN+V +W+L +++
Sbjct: 238 LKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKL 297
Query: 181 KFHEGHIRSIDFHPLEFLLATGSA--DRTVKFW 211
+ H + S HP E ++A+ + D+T+K W
Sbjct: 298 QGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 267 (99.0 bits), Expect = 7.8e-22, P = 7.8e-22
Identities = 63/258 (24%), Positives = 120/258 (46%)
Query: 3 KRGYKLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
K Y L+ +A H+ V+ + +L + D+ + +W ++ G +
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
VA+ S L+++ + +K+WD+ K ++TL GH + F+P SG D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+++IWD++ C+ T H+ ++ + F DG +VS +D + ++WD +G+ L
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 182 FHEGH-IRSIDFHPL-EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAI--TFH-P 236
+ + + F P +++LA + D T+K WD + + + + I F
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 269
Query: 237 DGRTLFSGFDDNLKVYSW 254
G+ + SG +DNL VY W
Sbjct: 270 GGKWIVSGSEDNL-VYIW 286
Score = 262 (97.3 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 69/258 (26%), Positives = 115/258 (44%)
Query: 47 KPT-AL-MSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCT 104
KP AL +L G + V SV F + + ++ +IK+W + K +T++GHK +
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 91
Query: 105 AVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDN 164
V + S D LKIWD+ C+ T KGH+ + F P +VSG FD
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 165 VVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFE----LIG 220
V++WD+ GK L H + ++ F+ L+ + S D + WD + + LI
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 221 STRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEPVICHDSV----DMGWSTLGDLCI 275
P V+ V F P+G+ + + D+ LK++ + C + + + + +
Sbjct: 212 DDNPPVSFVK---FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV 268
Query: 276 NDGKLLGCSFYRNSVGIW 293
GK + N V IW
Sbjct: 269 TGGKWIVSGSEDNLVYIW 286
Score = 254 (94.5 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 60/256 (23%), Positives = 120/256 (46%)
Query: 7 KLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVA 65
K ++ ++ H ++ ++ + L++ DD+ + +W + L +L G S+ V
Sbjct: 78 KFEKTISGHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCN 136
Query: 66 FDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLK 125
F+ L+++G+ +++WD++ K ++TL H +AV F+ G S D +
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 196
Query: 126 IWDIRKKGCIHTY-KGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
IWD C+ T ++ ++F+P+G+++++ DN +K+WD + GK L + H+
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 256
Query: 185 GHIRSIDFHPLEFL----LATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
I F + +GS D V W+L+T E++ + V + HP
Sbjct: 257 NEKYCI-FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENI 315
Query: 241 LFSGFDDNLKVYS-WE 255
+ S +N K W+
Sbjct: 316 IASAALENDKTIKLWK 331
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 276 (102.2 bits), Expect = 8.5e-23, P = 8.5e-23
Identities = 60/213 (28%), Positives = 109/213 (51%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G L+ HS V C + ++ +++G D+ V +W + L +L S PV +V
Sbjct: 119 GKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 177
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTA-VEFHPFGEFFASGCMDTN 123
F+ L+++ + G+ ++WD + ++TL + + V+F P G++ + +D
Sbjct: 178 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTI--RFT-PDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
LK+WD K C+ TY GH I F+ G+W+VSG DN+V +W+L +++
Sbjct: 238 LKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKL 297
Query: 181 KFHEGHIRSIDFHPLEFLLATGSA--DRTVKFW 211
+ H + S HP E ++A+ + D+T+K W
Sbjct: 298 QGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 267 (99.0 bits), Expect = 7.8e-22, P = 7.8e-22
Identities = 63/258 (24%), Positives = 120/258 (46%)
Query: 3 KRGYKLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
K Y L+ +A H+ V+ + +L + D+ + +W ++ G +
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
VA+ S L+++ + +K+WD+ K ++TL GH + F+P SG D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+++IWD++ C+ T H+ ++ + F DG +VS +D + ++WD +G+ L
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 182 FHEGH-IRSIDFHPL-EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAI--TFH-P 236
+ + + F P +++LA + D T+K WD + + + + I F
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 269
Query: 237 DGRTLFSGFDDNLKVYSW 254
G+ + SG +DNL VY W
Sbjct: 270 GGKWIVSGSEDNL-VYIW 286
Score = 262 (97.3 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 69/258 (26%), Positives = 115/258 (44%)
Query: 47 KPT-AL-MSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCT 104
KP AL +L G + V SV F + + ++ +IK+W + K +T++GHK +
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 91
Query: 105 AVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDN 164
V + S D LKIWD+ C+ T KGH+ + F P +VSG FD
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 165 VVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFE----LIG 220
V++WD+ GK L H + ++ F+ L+ + S D + WD + + LI
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 221 STRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEPVICHDSV----DMGWSTLGDLCI 275
P V+ V F P+G+ + + D+ LK++ + C + + + + +
Sbjct: 212 DDNPPVSFVK---FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV 268
Query: 276 NDGKLLGCSFYRNSVGIW 293
GK + N V IW
Sbjct: 269 TGGKWIVSGSEDNLVYIW 286
Score = 254 (94.5 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 60/256 (23%), Positives = 120/256 (46%)
Query: 7 KLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVA 65
K ++ ++ H ++ ++ + L++ DD+ + +W + L +L G S+ V
Sbjct: 78 KFEKTISGHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCN 136
Query: 66 FDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLK 125
F+ L+++G+ +++WD++ K ++TL H +AV F+ G S D +
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 196
Query: 126 IWDIRKKGCIHTY-KGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
IWD C+ T ++ ++F+P+G+++++ DN +K+WD + GK L + H+
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 256
Query: 185 GHIRSIDFHPLEFL----LATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
I F + +GS D V W+L+T E++ + V + HP
Sbjct: 257 NEKYCI-FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENI 315
Query: 241 LFSGFDDNLKVYS-WE 255
+ S +N K W+
Sbjct: 316 IASAALENDKTIKLWK 331
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 276 (102.2 bits), Expect = 8.5e-23, P = 8.5e-23
Identities = 60/213 (28%), Positives = 109/213 (51%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G L+ HS V C + ++ +++G D+ V +W + L +L S PV +V
Sbjct: 119 GKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 177
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTA-VEFHPFGEFFASGCMDTN 123
F+ L+++ + G+ ++WD + ++TL + + V+F P G++ + +D
Sbjct: 178 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTI--RFT-PDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
LK+WD K C+ TY GH I F+ G+W+VSG DN+V +W+L +++
Sbjct: 238 LKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKL 297
Query: 181 KFHEGHIRSIDFHPLEFLLATGSA--DRTVKFW 211
+ H + S HP E ++A+ + D+T+K W
Sbjct: 298 QGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 267 (99.0 bits), Expect = 7.8e-22, P = 7.8e-22
Identities = 63/258 (24%), Positives = 120/258 (46%)
Query: 3 KRGYKLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
K Y L+ +A H+ V+ + +L + D+ + +W ++ G +
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
VA+ S L+++ + +K+WD+ K ++TL GH + F+P SG D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+++IWD++ C+ T H+ ++ + F DG +VS +D + ++WD +G+ L
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 182 FHEGH-IRSIDFHPL-EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAI--TFH-P 236
+ + + F P +++LA + D T+K WD + + + + I F
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 269
Query: 237 DGRTLFSGFDDNLKVYSW 254
G+ + SG +DNL VY W
Sbjct: 270 GGKWIVSGSEDNL-VYIW 286
Score = 262 (97.3 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 69/258 (26%), Positives = 115/258 (44%)
Query: 47 KPT-AL-MSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCT 104
KP AL +L G + V SV F + + ++ +IK+W + K +T++GHK +
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 91
Query: 105 AVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDN 164
V + S D LKIWD+ C+ T KGH+ + F P +VSG FD
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 165 VVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFE----LIG 220
V++WD+ GK L H + ++ F+ L+ + S D + WD + + LI
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 221 STRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEPVICHDSV----DMGWSTLGDLCI 275
P V+ V F P+G+ + + D+ LK++ + C + + + + +
Sbjct: 212 DDNPPVSFVK---FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV 268
Query: 276 NDGKLLGCSFYRNSVGIW 293
GK + N V IW
Sbjct: 269 TGGKWIVSGSEDNLVYIW 286
Score = 254 (94.5 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 60/256 (23%), Positives = 120/256 (46%)
Query: 7 KLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVA 65
K ++ ++ H ++ ++ + L++ DD+ + +W + L +L G S+ V
Sbjct: 78 KFEKTISGHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCN 136
Query: 66 FDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLK 125
F+ L+++G+ +++WD++ K ++TL H +AV F+ G S D +
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 196
Query: 126 IWDIRKKGCIHTY-KGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
IWD C+ T ++ ++F+P+G+++++ DN +K+WD + GK L + H+
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 256
Query: 185 GHIRSIDFHPLEFL----LATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
I F + +GS D V W+L+T E++ + V + HP
Sbjct: 257 NEKYCI-FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENI 315
Query: 241 LFSGFDDNLKVYS-WE 255
+ S +N K W+
Sbjct: 316 IASAALENDKTIKLWK 331
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 287 (106.1 bits), Expect = 9.1e-23, P = 9.1e-23
Identities = 64/245 (26%), Positives = 112/245 (45%)
Query: 9 QEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDS 68
+ F H + + + L +G D + +W + + G V V F
Sbjct: 13 RHFKGHRDAITSVDFSLNT-KQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSP 71
Query: 69 AEVLVLAGASTGVIKLWDLEESKMVRTL-TGHKSNCTAVEFHPFGEFFASGCMDTNLKIW 127
+ L+ +G+ +++W + K T+ H + +V F G+ + D +K+W
Sbjct: 72 SGHLLASGSRDKTVRIW-IPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW 130
Query: 128 DIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHI 187
++ + + H + RF+PDGR +VS D VK+WD T+ + +H + H G +
Sbjct: 131 STHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD 247
+DFHP +A S D TVK WD+ T L+ + V+A++FHP G L + D
Sbjct: 191 TYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSD 250
Query: 248 N-LKV 251
+ LK+
Sbjct: 251 STLKI 255
Score = 278 (102.9 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 62/220 (28%), Positives = 105/220 (47%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAE 70
F AH+A V + + L+T DD+ V +W+ + L SL + V F
Sbjct: 99 FRAHTATVRSVHFCSDG-QSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDG 157
Query: 71 VLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
L+++ + +KLWD + V + H T V+FHP G A+ MD +K+WD+R
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVR 217
Query: 131 KKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSI 190
+ Y+ H+ +N + F P G ++++ D+ +K+ DL G+LL+ H+G ++
Sbjct: 218 THRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTV 277
Query: 191 DFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVH 230
F A+G +D V W F+++ EV VH
Sbjct: 278 AFSRTGEYFASGGSDEQVMVWK-SNFDVVDYR--EVIKVH 314
Score = 274 (101.5 bits), Expect = 4.8e-21, P = 4.8e-21
Identities = 65/252 (25%), Positives = 105/252 (41%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
R Y+ F H V C++ L +G D+ V +W ++ V S
Sbjct: 53 RAYR---FAGHKDAVTCVNFSPSG-HLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRS 108
Query: 64 VAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN 123
V F S ++ + +K+W K + +L+ H + F P G S D
Sbjct: 109 VHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKT 168
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
+K+WD + C+H+Y H + + F P G + + DN VKVWD+ +LL ++ H
Sbjct: 169 VKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLH 228
Query: 184 EGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS 243
+ ++ FHP L T S+D T+K DL L+ + + F G S
Sbjct: 229 SAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 288
Query: 244 GFDDNLKVYSWE 255
G D +V W+
Sbjct: 289 GGSDE-QVMVWK 299
Score = 225 (84.3 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 58/210 (27%), Positives = 93/210 (44%)
Query: 88 EESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINT 147
E+ + R GH+ T+V+F + ASG MD+ L +W ++ + + + GH +
Sbjct: 7 EDPSLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTC 66
Query: 148 IRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRT 207
+ F+P G + SG D V++W F+ H +RS+ F L T S D+T
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKT 126
Query: 208 VKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVI--C-HDSVD 264
VK W + + S + V F PDGR + S DD V W+ C H +
Sbjct: 127 VKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKT-VKLWDKTSRECVHSYCE 185
Query: 265 MG-WSTLGDLCINDGKLLGCSFYRNSVGIW 293
G + T D + G + + N+V +W
Sbjct: 186 HGGFVTYVDFHPS-GTCIAAASMDNTVKVW 214
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 286 (105.7 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 72/245 (29%), Positives = 108/245 (44%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAE 70
+V H V + L + D+ V LW K ++PV SV F SA+
Sbjct: 56 YVGHKDVVTSVQFSPLG-NLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDF-SAD 113
Query: 71 VLVLAGASTGV-IKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI 129
LA AS IK+W++ + + +L H +F P G S D +KIWD
Sbjct: 114 GQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
K C++ + N + F P+G + S G D+ VK+WD+ KLL ++ H G +
Sbjct: 174 TNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNC 233
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNL 249
+ FHP + T S+D T+K DL LI + + V ++F G SG D
Sbjct: 234 VSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADT- 292
Query: 250 KVYSW 254
+V W
Sbjct: 293 QVLLW 297
Score = 285 (105.4 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 64/243 (26%), Positives = 115/243 (47%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTA-LMSLCGLSSPVDSVAFDSA 69
F H A + + + L T D + LW KP A G V SV F
Sbjct: 14 FKGHKAAITSVDFSPSG-KQLATASWDTFLMLWNC-KPQARAFRYVGHKDVVTSVQFSPL 71
Query: 70 EVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI 129
L+ + + ++LW ++ H + +V+F G+F A+ D ++K+W++
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNM 131
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
++ +++ HT + +F+PDGR +VS D +K+WD T + +++F G
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 191
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN- 248
+DF+P +A+ +D TVK WD+ +L+ + GV+ ++FHP G + + D
Sbjct: 192 VDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGT 251
Query: 249 LKV 251
LK+
Sbjct: 252 LKI 254
Score = 235 (87.8 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 66/243 (27%), Positives = 115/243 (47%)
Query: 88 EESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINT 147
E+ + R GHK+ T+V+F P G+ A+ DT L +W+ + + Y GH + +
Sbjct: 6 EDPVLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTS 65
Query: 148 IRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRT 207
++F+P G + S D V++W +FK H +RS+DF LAT S D++
Sbjct: 66 VQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKS 125
Query: 208 VKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN-LKVYSWEPVICHD--SVD 264
+K W++ + S V F PDGR + S +D +K++ C + S
Sbjct: 126 IKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDS 185
Query: 265 MGWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHV-EPYGVGAPEPDQSICTEVKFNPP 323
+G++ D N G + + ++V IW V+ + + Y V + + C V F+P
Sbjct: 186 VGFANFVDFNPN-GTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVN---C--VSFHPS 239
Query: 324 GSH 326
G++
Sbjct: 240 GNY 242
Score = 52 (23.4 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 599 DVTPQTTLSSNEDHVANVTSQTRLNGNEYQAATAPQQTRLSSNIDPVANVTPQTLPSGNE 658
D+ P+T +E + V +L + Q A+ P LS + + T +TLP E
Sbjct: 327 DIYPRTP-HPHEGKIETVEINPKLEVIDLQTASPPVVDILSFDSTTTTDTTVRTLPDKGE 385
Query: 659 D 659
+
Sbjct: 386 E 386
Score = 38 (18.4 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 868 DIATVITPHVTALSYERTST 887
D+ T P V LS++ T+T
Sbjct: 353 DLQTASPPVVDILSFDSTTT 372
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 286 (105.7 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 64/247 (25%), Positives = 113/247 (45%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A+ G F H+A + C+S ++ + TG D LW I +++L G + +
Sbjct: 164 AETGKCYHTFRGHTAEIVCLSFNPQST-VVATGSMDTTAKLWDIQSGEEVVTLTGHLAEI 222
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
S++FD++ ++ G+ + +WD + V TL GH + ++ F +G MD
Sbjct: 223 ISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMD 282
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+WD C+ T GH I F G+ + + D +V++ T K + +
Sbjct: 283 KTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLE 342
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTL 241
HEG I I F+P L TGS+D+T + WD++T + + + + F+ G +
Sbjct: 343 GHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIV 402
Query: 242 FSGFDDN 248
+G DN
Sbjct: 403 ITGSKDN 409
Score = 263 (97.6 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 70/291 (24%), Positives = 123/291 (42%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G +L H V I+ + TG D+ LW+ + G ++ + +
Sbjct: 124 GEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCL 183
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
+F+ +V G+ KLWD++ + V TLTGH + ++ F G+ +G D +
Sbjct: 184 SFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTV 243
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
+WD +HT GH I++ F+ D +++G D +WD T+GK + H+
Sbjct: 244 VVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHD 303
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG 244
I F L+AT SAD T + ++ T + I + I+F+P G L +G
Sbjct: 304 DEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTG 363
Query: 245 FDDNL-KVYSWEPVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIW 293
D +++ + C ++ + N G ++ NS IW
Sbjct: 364 SSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 259 (96.2 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 69/250 (27%), Positives = 112/250 (44%)
Query: 6 YKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVA 65
Y + AH + +++ K F ITG D+ +W L +L G + V ++A
Sbjct: 83 YLFKVLRAHILPLTNVALNKAGSCF-ITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIA 141
Query: 66 FDSAEVLVLA-GASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
F++ +A G+ KLW E K T GH + + F+P A+G MDT
Sbjct: 142 FNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTA 201
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
K+WDI+ + T GH I ++ F G +++G FD+ V VWD + G+ +H H
Sbjct: 202 KLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHC 261
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG 244
I S F L+ TGS D+T WD + + + + + F G+ + +
Sbjct: 262 AEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATA 321
Query: 245 F-DDNLKVYS 253
D +VY+
Sbjct: 322 SADGTARVYN 331
Score = 258 (95.9 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 68/273 (24%), Positives = 118/273 (43%)
Query: 60 PVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFH-PFGEFFASG 118
P+ +VA + A + G+ K+WD + + TL GH++ A+ F+ P+G+ A+G
Sbjct: 94 PLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATG 153
Query: 119 CMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLH 178
D K+W C HT++GHT I + F P V +G D K+WD+ +G+ +
Sbjct: 154 SFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVV 213
Query: 179 DFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDG 238
H I S+ F + TGS D TV WD T + + + + F D
Sbjct: 214 TLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDC 273
Query: 239 RTLFSGFDDNLKVYSWEPVI--CHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWVA 295
+ +G D + W+ C ++ + D C + GKL+ + + ++ A
Sbjct: 274 SLILTGSMDKTCML-WDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNA 332
Query: 296 DVSHVEPYGVGAPEPDQSICTEVKFNPPGSHSL 328
+ E + +++ FNP G+ L
Sbjct: 333 TTRKC----ITKLEGHEGEISKISFNPQGNRLL 361
Score = 154 (59.3 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 57/216 (26%), Positives = 92/216 (42%)
Query: 79 TGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK---GCI 135
T I L +L S V TL G VE P AS L + +++K C
Sbjct: 27 TKSIDLLELSPSTDVNTLVGEIQK---VE--PL--ITASRTKQVRLLVQRLQEKLRQHCD 79
Query: 136 HTY------KGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
H + + H + + G ++G +D KVWD +G+ LH + H + +
Sbjct: 80 HNFYLFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYA 139
Query: 190 IDFH-PLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDD 247
I F+ P +ATGS D+T K W ET + + R + ++F+P + +G D
Sbjct: 140 IAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDT 199
Query: 248 NLKVY---SWEPVIC---H--DSVDMGWSTLGDLCI 275
K++ S E V+ H + + + + T GD I
Sbjct: 200 TAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRII 235
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 286 (105.7 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 67/248 (27%), Positives = 120/248 (48%)
Query: 9 QEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDS 68
+ F H + + + + +G D V +W + + G V V F
Sbjct: 12 RNFKGHRDAITSLDFSPSG-KQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSP 70
Query: 69 AEVLVLAGASTGVIKLW--DLE-ESKMVRTLTGH-KSNCTAVEFHPFGEFFASGCMDTNL 124
+ L+ + + ++LW ++ ES + R TG +S C + + G+ + D ++
Sbjct: 71 SAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSAD----GQSLLTASDDQSI 126
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
K+W + ++ I T + H + RF+PDG+ +VS D VK+WD ++ +L+H F
Sbjct: 127 KLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPG 186
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG 244
G+ +DFHP +AT S+D TV+ WD+ T L+ + V+A++FHP G L +
Sbjct: 187 GYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTA 246
Query: 245 FDDN-LKV 251
D+ LK+
Sbjct: 247 SSDSTLKI 254
Score = 255 (94.8 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 69/261 (26%), Positives = 105/261 (40%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
R Y+ F H V C+ A L + D+ V LW + + V S
Sbjct: 52 RAYR---FTGHKDAVTCVQFSPSA-HLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRS 107
Query: 64 VAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN 123
V F + +L + IKLW + K++ TL H + F P G+ S D
Sbjct: 108 VCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRT 167
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
+K+WD + IHT+ + + F P + + DN V+VWD+ LL ++ H
Sbjct: 168 VKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVH 227
Query: 184 EGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS 243
+ ++ FHP L T S+D T+K DL L+ + ++F G S
Sbjct: 228 SAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFAS 287
Query: 244 GFDDNLKVYSWEPVICHDSVD 264
D +V W DSVD
Sbjct: 288 AGSDQ-QVMVWRTNF--DSVD 305
Score = 243 (90.6 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 56/213 (26%), Positives = 99/213 (46%)
Query: 44 AIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNC 103
A+ PT + G + S+ F + + +G+ + +W+++ TGHK
Sbjct: 4 ALDDPTLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAV 63
Query: 104 TAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFD 163
T V+F P AS D +++W KG ++ HT + ++ F+ DG+ +++ D
Sbjct: 64 TCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDD 123
Query: 164 NVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTR 223
+K+W + K++ + H +R F P L+ + S DRTVK WD + +LI T
Sbjct: 124 QSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLI-HTF 182
Query: 224 PEVTGVHA-ITFHPDGRTLFSGFDDNLKVYSWE 255
E G + + FHP + + DN V W+
Sbjct: 183 CEPGGYSSYVDFHPSSTCIATASSDNT-VRVWD 214
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 271 (100.5 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 62/256 (24%), Positives = 118/256 (46%)
Query: 5 GYKLQEFV-AHSANVNCISIGKKAC-RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
GYKL + H+ +++ + C +FL T D+ V +W + + +L G V+
Sbjct: 68 GYKLISTIEGHTKSISAVKFSP--CGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVN 125
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
A+ + ++ + +K++++ KM +TL GH + F+P SG D
Sbjct: 126 DFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDE 185
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
+++IWD+R C+ T H+ ++ + F DG + SG +D +V++WD G+ +
Sbjct: 186 SVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVD 245
Query: 183 HEGH-IRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAI--TFH-PDG 238
E + + F P + + + D T+K WD + + + + I F G
Sbjct: 246 DENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGG 305
Query: 239 RTLFSGFDDNLKVYSW 254
+ + SG +D K+Y W
Sbjct: 306 KWIISGSED-CKIYVW 320
Score = 266 (98.7 bits), Expect = 7.0e-21, P = 7.0e-21
Identities = 55/204 (26%), Positives = 108/204 (52%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H+ V C + ++ +++G D+ V +W + + +L S PV +V+F+ L+
Sbjct: 162 HTNYVFCCNFNPQSS-LVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLI 220
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTA-VEFHPFGEFFASGCMDTNLKIWDIRKK 132
+G+ G++++WD + V+TL ++ A V+F P G++ S +D LK+WD K
Sbjct: 221 TSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKG 280
Query: 133 GCIHTYKGHTRGINTI--RFT-PDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
+ Y+GH I F+ G+W++SG D + VW+L +++ + H + +
Sbjct: 281 KTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIA 340
Query: 190 IDFHPLEFLLATGSA--DRTVKFW 211
D HP++ ++A+G+ D T++ W
Sbjct: 341 SDCHPMQNMIASGALEPDNTIRIW 364
Score = 250 (93.1 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 48/165 (29%), Positives = 87/165 (52%)
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
K++ T+ GH + +AV+F P G+F + D +KIW++ C T GH G+N +
Sbjct: 70 KLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAW 129
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
+ D + +V+ D +K++++ K+ K H ++ +F+P L+ +GS D +V+
Sbjct: 130 SADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRI 189
Query: 211 WDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
WD+ T + + V A++F+ DG + SG D L V W+
Sbjct: 190 WDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGL-VRIWD 233
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 291 (107.5 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 61/216 (28%), Positives = 107/216 (49%)
Query: 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
K +L+ HS V S +L++ +D V LW++ T L+ G + PV
Sbjct: 291 KTASELKILYGHSGPVYGASFSPDR-NYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVW 349
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
F ++G V +LW + + +R GH ++ FHP + A+G D
Sbjct: 350 DTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADR 409
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
+++WD+ C+ + GH I+++ F+P+GR++ +G D V +WD+ G ++ + K
Sbjct: 410 TVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKG 469
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWD-LETFE 217
H + S+ F +LA+GS D TV+ WD ++ FE
Sbjct: 470 HTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFE 505
Score = 280 (103.6 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 63/214 (29%), Positives = 99/214 (46%)
Query: 51 LMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHP 110
L L G S PV +F +L+ + G ++LW L+ + GH +F P
Sbjct: 296 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 355
Query: 111 FGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
+G +F SG D ++W + + GH +N RF P+ +V +G D V++WD
Sbjct: 356 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD 415
Query: 171 LTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVH 230
+ G + F H+G I S+ F P LATG+ D V WD+ ++G + V
Sbjct: 416 VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVC 475
Query: 231 AITFHPDGRTLFSGFDDNLKVYSWEPVICHDSVD 264
++ F DG L SG DN V W+ V + ++
Sbjct: 476 SLRFSRDGEILASGSMDNT-VRLWDAVKAFEDLE 508
Score = 261 (96.9 bits), Expect = 6.4e-19, P = 6.4e-19
Identities = 77/271 (28%), Positives = 129/271 (47%)
Query: 31 LITGG-DDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
LI GG D V +W++ P L S+ ++ + + +S +VL ++ D +
Sbjct: 244 LIAGGFADSTVRVWSV-TPKKLRSV-KQAADLSLIDKESDDVLE---------RIMDEKT 292
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
+ ++ L GH F P + S D +++W ++ C+ YKGH + +
Sbjct: 293 ASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ 352
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
F+P G + VSGG D V ++W + L F H + FHP +ATGSADRTV+
Sbjct: 353 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 412
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVICHDSV--DM-G 266
WD+ + +H++TF P+GR L +G D +V W+ I H + ++ G
Sbjct: 413 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RVLLWD--IGHGLMVGELKG 469
Query: 267 WS-TLGDLCIN-DGKLLGCSFYRNSVGIWVA 295
+ T+ L + DG++L N+V +W A
Sbjct: 470 HTDTVCSLRFSRDGEILASGSMDNTVRLWDA 500
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 284 (105.0 bits), Expect = 3.6e-22, P = 3.6e-22
Identities = 77/295 (26%), Positives = 133/295 (45%)
Query: 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
++ Y + AH + ++ K F ITG D+ +W L +L G + V
Sbjct: 80 RKFYLFRALQAHILPLTNVAFNKSGSCF-ITGSYDRTCKIWDTASGEELHTLEGHRNVVY 138
Query: 63 SVAFDSAEV-LVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
++AF++ V G+ KLW E K T GH + + F+P A+G MD
Sbjct: 139 AIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMD 198
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
T K+WD+ + T GH I ++ F G +V+G FD+ +WD+ +G+ +H
Sbjct: 199 TTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLS 258
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTL 241
H G I + F+ L+AT S D++ K WD E + + + V + F+ G+ +
Sbjct: 259 GHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLI 318
Query: 242 FSGFDDNL-KVYSWEPVICHDSVDMGWSTLGDLCIN-DG-KLLGCSFYRNSVGIW 293
+ D +V+S + C ++ + +C N G ++L S + S +W
Sbjct: 319 ATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTS-RVW 372
Score = 252 (93.8 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 63/256 (24%), Positives = 108/256 (42%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G +L H V I+ + TG D+ LW+ + G ++ + +
Sbjct: 124 GEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCL 183
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
AF+ LV G+ KLWD+E + V TL GH + ++ F+ G+ +G D
Sbjct: 184 AFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTA 243
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
+WD+ +H GH I+ ++F D + + D KVWD G+ L H
Sbjct: 244 ILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHN 303
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDG-RTLFS 243
+ + F+ L+AT SAD T + + +TF+ + + + F+ G R L +
Sbjct: 304 DEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTA 363
Query: 244 GFDDNLKVYSWEPVIC 259
D +V+ + C
Sbjct: 364 SVDKTSRVWCVKTGAC 379
Score = 242 (90.2 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 65/221 (29%), Positives = 100/221 (45%)
Query: 83 KLWDLEESK--MVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKG 140
K+ +E K + R L H T V F+ G F +G D KIWD +HT +G
Sbjct: 73 KVGQKDERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEG 132
Query: 141 HTRGINTIRFT-PDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLL 199
H + I F P G V +G FD K+W GK + F+ H I + F+P L+
Sbjct: 133 HRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLV 192
Query: 200 ATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVIC 259
ATGS D T K WD+E+ E + + + ++ F+ G L +G D+ + W+ V
Sbjct: 193 ATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAIL-WD-VPS 250
Query: 260 HDSVDMGWSTLGDL-CIN---DGKLLGCSFYRNSVGIWVAD 296
V + G++ C+ D L+ + S +W A+
Sbjct: 251 GRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAE 291
Score = 241 (89.9 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 55/247 (22%), Positives = 110/247 (44%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A+ G F H+A + C++ ++ + TG D LW + + +L G + +
Sbjct: 164 AETGKCFYTFRGHTAEIVCLAFNPQST-LVATGSMDTTAKLWDVESGEEVSTLAGHFAEI 222
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
S+ F++ ++ G+ LWD+ + V L+GH+ + V+F+ A+ +D
Sbjct: 223 ISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLD 282
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+ K+WD C+ T GH + + F G+ + + D +V+ + L +
Sbjct: 283 KSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLE 342
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTL 241
H+G I + F+ + T S D+T + W ++T + + + F+ +G T+
Sbjct: 343 GHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTI 402
Query: 242 FSGFDDN 248
+G DN
Sbjct: 403 ITGSKDN 409
Score = 184 (69.8 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 50/207 (24%), Positives = 82/207 (39%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G ++ H A + + R L+TG D LW + + L G + V
Sbjct: 209 GEEVSTLAGHFAEIISLCFNTTGDR-LVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCV 267
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
F+ L+ + K+WD E + + TL GH V F+ G+ A+ D
Sbjct: 268 QFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTS 327
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
+++ C+ +GH I+ + F G V++ D +VW + G L + H
Sbjct: 328 RVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHS 387
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFW 211
I S F+ + TGS D T + W
Sbjct: 388 DEIFSCAFNYEGDTIITGSKDNTCRIW 414
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 298 (110.0 bits), Expect = 4.1e-22, Sum P(2) = 4.1e-22
Identities = 57/200 (28%), Positives = 103/200 (51%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
HS V +S +L++ +D + LW++ T L+ G + PV F
Sbjct: 498 HSGPVYGVSFSPDR-NYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYF 556
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
++G V +LW + + +R GH ++ T FHP + A+G D +++WD+
Sbjct: 557 VSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGN 616
Query: 134 CIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFH 193
C+ + GH I+++ F+P+G+++ SG D V +WD+ G ++ + K H G I ++ F
Sbjct: 617 CVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFS 676
Query: 194 PLEFLLATGSADRTVKFWDL 213
++A+GS D TV+ WD+
Sbjct: 677 RDGEIIASGSIDNTVRLWDV 696
Score = 278 (102.9 bits), Expect = 6.3e-20, Sum P(2) = 6.3e-20
Identities = 64/211 (30%), Positives = 98/211 (46%)
Query: 54 LCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGE 113
L G S PV V+F +L+ + G I+LW L+ + GH +F PFG
Sbjct: 495 LHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGY 554
Query: 114 FFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTA 173
+F SG D ++W + + GH + RF P+ +V +G D V++WD+
Sbjct: 555 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLN 614
Query: 174 GKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAIT 233
G + F H+G I S+ F P LA+GS D V WD+ +I + ++A+
Sbjct: 615 GNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALK 674
Query: 234 FHPDGRTLFSGFDDNLKVYSWEPVICHDSVD 264
F DG + SG DN V W+ + D V+
Sbjct: 675 FSRDGEIIASGSIDNT-VRLWDVMRAIDDVE 704
Score = 251 (93.4 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 74/269 (27%), Positives = 127/269 (47%)
Query: 31 LITGG-DDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
LI GG D V +W++ P L + ++ ++ + +S +VL ++ D +
Sbjct: 440 LIAGGFADSTVRVWSV-TPKKLRKVKS-AADLNLIDKESDDVLE---------RIMDEKT 488
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
S + L GH V F P + S D +++W ++ C+ YKGH + +
Sbjct: 489 SSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQ 548
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
F+P G + VSGG D V ++W + L F H + FHP +ATGS+DRTV+
Sbjct: 549 FSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVR 608
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVICHDSV--DM-G 266
WD+ + +H++ F P+G+ L SG D +V W+ I H + ++ G
Sbjct: 609 LWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDG-RVLLWD--IGHGLMIAELKG 665
Query: 267 WS-TLGDLCIN-DGKLLGCSFYRNSVGIW 293
+ T+ L + DG+++ N+V +W
Sbjct: 666 HTGTIYALKFSRDGEIIASGSIDNTVRLW 694
Score = 183 (69.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 36/124 (29%), Positives = 61/124 (49%)
Query: 8 LQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFD 67
L+ F H A+V C + ++ TG D+ V LW + + G P+ S+AF
Sbjct: 576 LRIFAGHLADVTCTRFHPNS-NYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFS 634
Query: 68 SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIW 127
+ +G++ G + LWD+ M+ L GH A++F GE ASG +D +++W
Sbjct: 635 PNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLW 694
Query: 128 DIRK 131
D+ +
Sbjct: 695 DVMR 698
Score = 135 (52.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 53/261 (20%), Positives = 99/261 (37%)
Query: 48 PTALMSLCGLS-----SPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSN 102
P L S+C + + +V F L+ G + +++W + K+ + + N
Sbjct: 411 PETLPSICFYTFLNAYQGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLN 470
Query: 103 CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGF 162
E E + KI +H + G G++ F+PD +++S
Sbjct: 471 LIDKESDDVLERIMDEKTSSESKI--------LHGHSGPVYGVS---FSPDRNYLLSSSE 519
Query: 163 DNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGST 222
D +++W L L +K H + F P + +G DR + W + ++ +
Sbjct: 520 DGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIF 579
Query: 223 RPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVICHDSVDMGWSTLG---DLCIN-DG 278
+ V FHP+ + +G D V W+ V+ + V + G L + +G
Sbjct: 580 AGHLADVTCTRFHPNSNYVATGSSDRT-VRLWD-VLNGNCVRIFTGHKGPIHSLAFSPNG 637
Query: 279 KLLGCSFYRNSVGIWVADVSH 299
K L V +W D+ H
Sbjct: 638 KFLASGSTDGRVLLW--DIGH 656
Score = 46 (21.3 bits), Expect = 4.1e-22, Sum P(2) = 4.1e-22
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 834 NVDQTTNVTRHRRSISN--TDQATSTTAHVAVKNNDDIATVITPH 876
++D T + R+I + TD T+ T H+ + +N + T H
Sbjct: 686 SIDNTVRLWDVMRAIDDVETDDFTAATGHIHLPDNSQELLLGTYH 730
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 269 (99.8 bits), Expect = 4.8e-22, P = 4.8e-22
Identities = 76/265 (28%), Positives = 119/265 (44%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLW--AIGKPTALMSLCGLSSPVD 62
GY + HS ++ + + + ++G DQ + LW A GK T G + V
Sbjct: 54 GYPQKRLYGHSHFISDVVLSSDG-NYALSGSWDQTLRLWDLAAGKTTRRFE--GHTKDVL 110
Query: 63 SVAFDSAEVLVLAGASTGVIKLWD-LEESKMVRTLTGHKSNCTAVEFHP--FGEFFASGC 119
SVAF + +++G+ IKLW+ L E K GH + V F P S
Sbjct: 111 SVAFSADNRQIVSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCG 170
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
D +K+W++ + + GH +NT+ +PDG SGG D+ +WDL GK L+
Sbjct: 171 WDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYT 230
Query: 180 FKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHP--- 236
+ H I ++ F P + L ++K WDL + + RPEV + P
Sbjct: 231 LE-HNDIINALCFSPNRYWLCVAYGP-SIKIWDLACKKTVEELRPEVVSPTSKADQPQCL 288
Query: 237 ------DGRTLFSGFDDNLKVYSWE 255
DG+TLF+G+ DN + W+
Sbjct: 289 SLAWSTDGQTLFAGYSDNT-IRVWQ 312
Score = 226 (84.6 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 68/262 (25%), Positives = 119/262 (45%)
Query: 54 LCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGE 113
L G S + V S L+G+ ++LWDL K R GH + +V F
Sbjct: 60 LYGHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNR 119
Query: 114 FFASGCMDTNLKIWDIRKKGCIHTYK--GHTRGINTIRFTPD--GRWVVSGGFDNVVKVW 169
SG D +K+W+ + C T + GHT ++ +RF+P+ +VS G+D VKVW
Sbjct: 120 QIVSGSRDKTIKLWNTLAE-CKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVW 178
Query: 170 DLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGV 229
+L KL ++ H G++ ++ P L +G D WDL + + T +
Sbjct: 179 NLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNL-YTLEHNDII 237
Query: 230 HAITFHPDGRTLFSGFDDNLKVYSWEPVICHDSVD------MGWSTLGDL--CIN----- 276
+A+ F P+ L + ++K+ W+ + C +V+ + ++ D C++
Sbjct: 238 NALCFSPNRYWLCVAYGPSIKI--WD-LACKKTVEELRPEVVSPTSKADQPQCLSLAWST 294
Query: 277 DGKLLGCSFYRNSVGIWVADVS 298
DG+ L + N++ +W VS
Sbjct: 295 DGQTLFAGYSDNTIRVWQVSVS 316
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 47/179 (26%), Positives = 83/179 (46%)
Query: 87 LEESKMVR-TLTGHKSNCTAVEFHPFG-EFFASGCMDTNLKIWDI-RKKGCIHTYK---- 139
+ E+ +R TL GH T + +P + S D L +W + R + + Y
Sbjct: 1 MSETLQLRGTLIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRL 60
Query: 140 -GHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFL 198
GH+ I+ + + DG + +SG +D +++WDL AGK F+ H + S+ F
Sbjct: 61 YGHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQ 120
Query: 199 LATGSADRTVKFWD-LETFELIGSTRPEVTGVHAITFHPDGRT--LFS-GFDDNLKVYS 253
+ +GS D+T+K W+ L + V + F P+ + S G+D +KV++
Sbjct: 121 IVSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWN 179
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 268 (99.4 bits), Expect = 6.1e-22, P = 6.1e-22
Identities = 55/212 (25%), Positives = 104/212 (49%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G ++++ HS+ VN ++ +I+G DD LW + + A+ + + +V
Sbjct: 128 GKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPD-KYQITAV 186
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
+F A + G +K+WDL + + TL GH+ T + P G + + MD L
Sbjct: 187 SFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKL 246
Query: 125 KIWDIR----KKGCIHTYKGHTRGI--NTIR--FTPDGRWVVSGGFDNVVKVWDLTAGKL 176
+WD+R + C+ ++GH N ++ ++PDG V +G D +V +WD T+ +
Sbjct: 247 CVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRT 306
Query: 177 LHDFKFHEGHIRSIDFHPLEFLLATGSADRTV 208
++ H G + FHP E ++ + S+D+ +
Sbjct: 307 IYKLPGHTGSVNECVFHPTEPIIGSCSSDKNI 338
Score = 225 (84.3 bits), Expect = 9.1e-16, P = 9.1e-16
Identities = 60/216 (27%), Positives = 99/216 (45%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVA-FDSAEVLVLAGASTGVIKLWDLEE 89
+++ D+ V W + + + SS V+S L+++G+ G KLWD+ +
Sbjct: 111 IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQ 170
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
++T K TAV F + +G +D ++K+WD+RK T +GH I +
Sbjct: 171 RGAIQTFPD-KYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMS 229
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTA-GKLLHDFKFHEGHIRSID-------FHPLEFLLAT 201
+PDG ++++ G DN + VWD+ K EGH + + + P +
Sbjct: 230 LSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTA 289
Query: 202 GSADRTVKFWDLETFELIGSTRPEVTG-VHAITFHP 236
GS+DR V WD + I P TG V+ FHP
Sbjct: 290 GSSDRMVHIWDTTSRRTIYKL-PGHTGSVNECVFHP 324
Score = 195 (73.7 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 65/243 (26%), Positives = 107/243 (44%)
Query: 93 VRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIH--TYKGHTRGINTIRF 150
+ L+GH S ++F+P G ASG D + +W + C + KGH I + +
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGD-CKNFMVLKGHKNAILDLHW 104
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSI-DFHPLEFLLATGSADRTVK 209
T DG +VS D V+ WD+ GK + H + S L+ +GS D T K
Sbjct: 105 TSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAK 164
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEPVICHDSVDMGWS 268
WD+ I T P+ + A++F +F+G D+++KV+ +++
Sbjct: 165 LWDMRQRGAI-QTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQD 223
Query: 269 TLGDLCIN-DGKLLGCSFYRNSVGIWVADVSHVEPYGVGAPEPDQSICTEVKFNPPGSHS 327
T+ + ++ DG L + N + +W + PY AP Q+ C VK H+
Sbjct: 224 TITGMSLSPDGSYLLTNGMDNKLCVW-----DMRPY---AP---QNRC--VKIFEGHQHN 270
Query: 328 LEK 330
EK
Sbjct: 271 FEK 273
Score = 183 (69.5 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 54/209 (25%), Positives = 88/209 (42%)
Query: 51 LMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE-ESKMVRTLTGHKSNCTAVEFH 109
+M L G S V ++ F+ A L+ +G+ I LW + + K L GHK+ + +
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWT 105
Query: 110 PFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR-WVVSGGFDNVVKV 168
G S D ++ WD+ I H+ +N+ T G ++SG D K+
Sbjct: 106 SDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKL 165
Query: 169 WDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTG 228
WD+ + F + I ++ F + TG D VK WDL E +
Sbjct: 166 WDMRQRGAIQTFP-DKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDT 224
Query: 229 VHAITFHPDGRTLFS-GFDDNLKVYSWEP 256
+ ++ PDG L + G D+ L V+ P
Sbjct: 225 ITGMSLSPDGSYLLTNGMDNKLCVWDMRP 253
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 292 (107.8 bits), Expect = 6.7e-22, P = 6.7e-22
Identities = 61/216 (28%), Positives = 107/216 (49%)
Query: 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
K +L+ HS V S +L++ +D V LW++ T L+ G + PV
Sbjct: 529 KTASELKILYGHSGPVYGASFSPDR-NYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVW 587
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
F ++G V +LW + + +R GH ++ FHP + A+G D
Sbjct: 588 DTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADR 647
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
+++WD+ C+ + GH I+++ F+P+GR++ +G D V +WD+ G ++ + K
Sbjct: 648 TVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKG 707
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWD-LETFE 217
H + S+ F +LA+GS D TV+ WD ++ FE
Sbjct: 708 HTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFE 743
Score = 279 (103.3 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 62/214 (28%), Positives = 99/214 (46%)
Query: 51 LMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHP 110
L L G S PV +F +L+ + G ++LW L+ + GH +F P
Sbjct: 534 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 593
Query: 111 FGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
+G +F SG D ++W + + GH +N RF P+ +V +G D V++WD
Sbjct: 594 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD 653
Query: 171 LTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVH 230
+ G + F H+G I S+ F P LATG+ D V WD+ ++G + V
Sbjct: 654 VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVC 713
Query: 231 AITFHPDGRTLFSGFDDNLKVYSWEPVICHDSVD 264
++ F DG L SG DN V W+ + + ++
Sbjct: 714 SLRFSRDGEILASGSMDNT-VRLWDAIKAFEDLE 746
Score = 264 (98.0 bits), Expect = 7.2e-19, P = 7.2e-19
Identities = 78/271 (28%), Positives = 129/271 (47%)
Query: 31 LITGG-DDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
LI GG D V +W++ P L S+ +S + + +S +VL ++ D +
Sbjct: 482 LIAGGFADSTVRVWSV-TPKKLRSV-KQASDLSLIDKESDDVLE---------RIMDEKT 530
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
+ ++ L GH F P + S D +++W ++ C+ YKGH + +
Sbjct: 531 ASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ 590
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
F+P G + VSGG D V ++W + L F H + FHP +ATGSADRTV+
Sbjct: 591 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 650
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVICHDSV--DM-G 266
WD+ + +H++TF P+GR L +G D +V W+ I H + ++ G
Sbjct: 651 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RVLLWD--IGHGLMVGELKG 707
Query: 267 WS-TLGDLCIN-DGKLLGCSFYRNSVGIWVA 295
+ T+ L + DG++L N+V +W A
Sbjct: 708 HTDTVCSLRFSRDGEILASGSMDNTVRLWDA 738
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 292 (107.8 bits), Expect = 6.7e-22, P = 6.7e-22
Identities = 61/216 (28%), Positives = 107/216 (49%)
Query: 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
K +L+ HS V S +L++ +D V LW++ T L+ G + PV
Sbjct: 531 KTASELKILYGHSGPVYGASFSPDR-NYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVW 589
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
F ++G V +LW + + +R GH ++ FHP + A+G D
Sbjct: 590 DTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADR 649
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
+++WD+ C+ + GH I+++ F+P+GR++ +G D V +WD+ G ++ + K
Sbjct: 650 TVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKG 709
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWD-LETFE 217
H + S+ F +LA+GS D TV+ WD ++ FE
Sbjct: 710 HTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFE 745
Score = 279 (103.3 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 62/214 (28%), Positives = 99/214 (46%)
Query: 51 LMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHP 110
L L G S PV +F +L+ + G ++LW L+ + GH +F P
Sbjct: 536 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 595
Query: 111 FGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
+G +F SG D ++W + + GH +N RF P+ +V +G D V++WD
Sbjct: 596 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD 655
Query: 171 LTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVH 230
+ G + F H+G I S+ F P LATG+ D V WD+ ++G + V
Sbjct: 656 VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVC 715
Query: 231 AITFHPDGRTLFSGFDDNLKVYSWEPVICHDSVD 264
++ F DG L SG DN V W+ + + ++
Sbjct: 716 SLRFSRDGEILASGSMDNT-VRLWDAIKAFEDLE 748
Score = 264 (98.0 bits), Expect = 7.2e-19, P = 7.2e-19
Identities = 78/271 (28%), Positives = 129/271 (47%)
Query: 31 LITGG-DDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
LI GG D V +W++ P L S+ +S + + +S +VL ++ D +
Sbjct: 484 LIAGGFADSTVRVWSV-TPKKLRSV-KQASDLSLIDKESDDVLE---------RIMDEKT 532
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
+ ++ L GH F P + S D +++W ++ C+ YKGH + +
Sbjct: 533 ASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ 592
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
F+P G + VSGG D V ++W + L F H + FHP +ATGSADRTV+
Sbjct: 593 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 652
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVICHDSV--DM-G 266
WD+ + +H++TF P+GR L +G D +V W+ I H + ++ G
Sbjct: 653 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RVLLWD--IGHGLMVGELKG 709
Query: 267 WS-TLGDLCIN-DGKLLGCSFYRNSVGIWVA 295
+ T+ L + DG++L N+V +W A
Sbjct: 710 HTDTVCSLRFSRDGEILASGSMDNTVRLWDA 740
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 267 (99.0 bits), Expect = 7.8e-22, P = 7.8e-22
Identities = 64/261 (24%), Positives = 124/261 (47%)
Query: 3 KRGYKLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
K Y L+ +A H+ V+ + +L + D+ + +W ++ G +
Sbjct: 32 KPNYTLKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
VA+ S L+++ + +K+WD+ K ++TL GH + F+P SG D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+++IWD++ C+ T H+ ++ + F DG +VS +D + ++WD +G+ L
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 182 FHEGH-IRSIDFHPL-EFLLATGSADRTVKFWD------LETFELIGSTRPEVTGVHAIT 233
+ + + F P +++LA + D T+K WD L+T+ + + + ++T
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVT 269
Query: 234 FHPDGRTLFSGFDDNLKVYSW 254
G+ + SG +DNL VY W
Sbjct: 270 ---GGKWIVSGSEDNL-VYIW 286
Score = 266 (98.7 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 59/213 (27%), Positives = 108/213 (50%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G L+ HS V C + ++ +++G D+ V +W + L +L S PV +V
Sbjct: 119 GKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 177
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTA-VEFHPFGEFFASGCMDTN 123
F+ L+++ + G+ ++WD + ++TL + + V+F P G++ + +D
Sbjct: 178 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTI--RFT-PDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
LK+WD K C+ TY H I F+ G+W+VSG DN+V +W+L +++
Sbjct: 238 LKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKL 297
Query: 181 KFHEGHIRSIDFHPLEFLLATGSA--DRTVKFW 211
+ H + S HP E ++A+ + D+T+K W
Sbjct: 298 QGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 265 (98.3 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 69/260 (26%), Positives = 115/260 (44%)
Query: 47 KP--TALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCT 104
KP T +L G + V SV F + + ++ +IK+W + K +T++GHK +
Sbjct: 32 KPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 91
Query: 105 AVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDN 164
V + S D LKIWD+ C+ T KGH+ + F P +VSG FD
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 165 VVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFE----LIG 220
V++WD+ GK L H + ++ F+ L+ + S D + WD + + LI
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 221 STRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSW------EPVICHDSVDMGWSTLGDL 273
P V+ V F P+G+ + + D+ LK++ + + CH + + +
Sbjct: 212 DDNPPVSFVK---FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEK--YCIFANF 266
Query: 274 CINDGKLLGCSFYRNSVGIW 293
+ GK + N V IW
Sbjct: 267 SVTGGKWIVSGSEDNLVYIW 286
Score = 254 (94.5 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 60/256 (23%), Positives = 120/256 (46%)
Query: 7 KLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVA 65
K ++ ++ H ++ ++ + L++ DD+ + +W + L +L G S+ V
Sbjct: 78 KFEKTISGHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCN 136
Query: 66 FDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLK 125
F+ L+++G+ +++WD++ K ++TL H +AV F+ G S D +
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 196
Query: 126 IWDIRKKGCIHTY-KGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
IWD C+ T ++ ++F+P+G+++++ DN +K+WD + GK L + H+
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHK 256
Query: 185 GHIRSIDFHPLEFL----LATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
I F + +GS D V W+L+T E++ + V + HP
Sbjct: 257 NEKYCI-FANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENI 315
Query: 241 LFSGFDDNLKVYS-WE 255
+ S +N K W+
Sbjct: 316 IASAALENDKTIKLWK 331
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 291 (107.5 bits), Expect = 8.6e-22, P = 8.6e-22
Identities = 61/216 (28%), Positives = 107/216 (49%)
Query: 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
K +L+ HS V S +L++ +D V LW++ T L+ G + PV
Sbjct: 531 KTASELKILYGHSGPVYGASFSPDR-NYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVW 589
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
F ++G V +LW + + +R GH ++ FHP + A+G D
Sbjct: 590 DTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADR 649
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
+++WD+ C+ + GH I+++ F+P+GR++ +G D V +WD+ G ++ + K
Sbjct: 650 TVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKG 709
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWD-LETFE 217
H + S+ F +LA+GS D TV+ WD ++ FE
Sbjct: 710 HTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFE 745
Score = 283 (104.7 bits), Expect = 6.4e-21, P = 6.4e-21
Identities = 64/214 (29%), Positives = 99/214 (46%)
Query: 51 LMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHP 110
L L G S PV +F +L+ + G ++LW L+ + GH +F P
Sbjct: 536 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 595
Query: 111 FGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
+G +F SG D ++W + + GH +N RF P+ +V +G D V++WD
Sbjct: 596 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD 655
Query: 171 LTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVH 230
+ G + F H+G I S+ F P LATG+ D V WD+ ++G + V
Sbjct: 656 VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVC 715
Query: 231 AITFHPDGRTLFSGFDDNLKVYSWEPVICHDSVD 264
++ F DG L SG DN V W+ V + V+
Sbjct: 716 SLRFSRDGEILASGSMDNT-VRLWDAVKAFEDVE 748
Score = 261 (96.9 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 77/271 (28%), Positives = 129/271 (47%)
Query: 31 LITGG-DDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
LI GG D V +W++ P L S+ ++ + + +S +VL ++ D +
Sbjct: 484 LIAGGFADSTVRVWSV-TPKKLRSV-KQAADLSLIDKESDDVLE---------RIMDEKT 532
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
+ ++ L GH F P + S D +++W ++ C+ YKGH + +
Sbjct: 533 ASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ 592
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
F+P G + VSGG D V ++W + L F H + FHP +ATGSADRTV+
Sbjct: 593 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 652
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVICHDSV--DM-G 266
WD+ + +H++TF P+GR L +G D +V W+ I H + ++ G
Sbjct: 653 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RVLLWD--IGHGLMVGELKG 709
Query: 267 WS-TLGDLCIN-DGKLLGCSFYRNSVGIWVA 295
+ T+ L + DG++L N+V +W A
Sbjct: 710 HTDTVCSLRFSRDGEILASGSMDNTVRLWDA 740
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 291 (107.5 bits), Expect = 8.7e-22, P = 8.7e-22
Identities = 61/216 (28%), Positives = 107/216 (49%)
Query: 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
K +L+ HS V S +L++ +D V LW++ T L+ G + PV
Sbjct: 532 KTASELKILYGHSGPVYGASFSPDR-NYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVW 590
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
F ++G V +LW + + +R GH ++ FHP + A+G D
Sbjct: 591 DTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADR 650
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
+++WD+ C+ + GH I+++ F+P+GR++ +G D V +WD+ G ++ + K
Sbjct: 651 TVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKG 710
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWD-LETFE 217
H + S+ F +LA+GS D TV+ WD ++ FE
Sbjct: 711 HTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFE 746
Score = 280 (103.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 63/214 (29%), Positives = 99/214 (46%)
Query: 51 LMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHP 110
L L G S PV +F +L+ + G ++LW L+ + GH +F P
Sbjct: 537 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 596
Query: 111 FGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
+G +F SG D ++W + + GH +N RF P+ +V +G D V++WD
Sbjct: 597 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD 656
Query: 171 LTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVH 230
+ G + F H+G I S+ F P LATG+ D V WD+ ++G + V
Sbjct: 657 VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVC 716
Query: 231 AITFHPDGRTLFSGFDDNLKVYSWEPVICHDSVD 264
++ F DG L SG DN V W+ V + ++
Sbjct: 717 SLRFSRDGEILASGSMDNT-VRLWDAVKAFEDLE 749
Score = 261 (96.9 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 77/271 (28%), Positives = 129/271 (47%)
Query: 31 LITGG-DDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
LI GG D V +W++ P L S+ ++ + + +S +VL ++ D +
Sbjct: 485 LIAGGFADSTVRVWSV-TPKKLRSV-KQAADLSLIDKESDDVLE---------RIMDEKT 533
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
+ ++ L GH F P + S D +++W ++ C+ YKGH + +
Sbjct: 534 ASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ 593
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
F+P G + VSGG D V ++W + L F H + FHP +ATGSADRTV+
Sbjct: 594 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 653
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVICHDSV--DM-G 266
WD+ + +H++TF P+GR L +G D +V W+ I H + ++ G
Sbjct: 654 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RVLLWD--IGHGLMVGELKG 710
Query: 267 WS-TLGDLCIN-DGKLLGCSFYRNSVGIWVA 295
+ T+ L + DG++L N+V +W A
Sbjct: 711 HTDTVCSLRFSRDGEILASGSMDNTVRLWDA 741
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 266 (98.7 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 84/301 (27%), Positives = 133/301 (44%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKP-----TALMSLCGLSSPVDSVA--F 66
HS V +S + L++G D+ + LW + + A L G S V A F
Sbjct: 14 HSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSF 73
Query: 67 DSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKI 126
DS L + T I+LWDLE+ + GH S+ +V P SG D +KI
Sbjct: 74 DSHYALSASWDKT--IRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKI 131
Query: 127 WDIRKKGCIHTYK--GHTRGINTIRFTP--DGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
W+I C +T GH+ ++ +RF+P D VS G+D VKVWDL L
Sbjct: 132 WNIIGN-CKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYG 190
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLF 242
H G++ ++ P L A+G D T+ WDL + S + ++A+ F P+ L
Sbjct: 191 HTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKAN-INALVFSPNRYWLC 249
Query: 243 SGFDDNLKVYSWEPV-----ICHDSVDMGWSTLGDLCIN-----DGKLLGCSFYRNSVGI 292
+ +++++ E + D V +G + CI+ DG+ L + N + +
Sbjct: 250 AATGSSIRIFDLETQEKVDELTVDFVGVGKKSSEPECISLTWSPDGQTLFSGWTDNLIRV 309
Query: 293 W 293
W
Sbjct: 310 W 310
Score = 175 (66.7 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 60/224 (26%), Positives = 102/224 (45%)
Query: 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLW-AIGKPTALMSLCGLSSPV 61
++G +FV H+++V +SI R +++G D+ + +W IG ++ G S V
Sbjct: 93 EKGECTHQFVGHTSDVLSVSISPDN-RQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWV 151
Query: 62 DSVAFD-SAEVLVLAGASTG-VIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGC 119
V F + + L A +K+WDLE + + GH +AV P G ASG
Sbjct: 152 SCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGG 211
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRG-INTIRFTPDGRWVVSGGFDNVVKVWDL-TAGK-- 175
D L +WD+ + H Y + IN + F+P+ W+ + ++ +++DL T K
Sbjct: 212 RDGTLMLWDLNES--THLYSLEAKANINALVFSPNRYWLCAATGSSI-RIFDLETQEKVD 268
Query: 176 -LLHDF-----KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDL 213
L DF K E S+ + P L +G D ++ W +
Sbjct: 269 ELTVDFVGVGKKSSEPECISLTWSPDGQTLFSGWTDNLIRVWQV 312
Score = 139 (54.0 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 40/169 (23%), Positives = 77/169 (45%)
Query: 14 HSANVNCISIGKKACRF-LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVL 72
HS V+C+ ++ G D+ V +W + + S G + V +V L
Sbjct: 147 HSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSL 206
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
+G G + LWDL ES + +L K+N A+ F P ++ ++++I+D+ +
Sbjct: 207 CASGGRDGTLMLWDLNESTHLYSLEA-KANINALVFSP-NRYWLCAATGSSIRIFDLETQ 264
Query: 133 GCIHTYKGHTRGIN---------TIRFTPDGRWVVSGGFDNVVKVWDLT 172
+ G+ ++ ++PDG+ + SG DN+++VW +T
Sbjct: 265 EKVDELTVDFVGVGKKSSEPECISLTWSPDGQTLFSGWTDNLIRVWQVT 313
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 285 (105.4 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 67/251 (26%), Positives = 110/251 (43%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
R Y+ +V H V + + L + D+ V LW + + ++PV S
Sbjct: 52 RAYR---YVGHKDVVTSLQFSPQG-NLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRS 107
Query: 64 VAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN 123
V F + ++ + IK+W + + + +L H +F P G S D
Sbjct: 108 VDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
+KIWD K C++ + N + F+P+G + S G D+ V++WD+ +LL ++ H
Sbjct: 168 IKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVH 227
Query: 184 EGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS 243
+ + FHP L T S+D TVK DL LI + + V ++F DG S
Sbjct: 228 SCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTS 287
Query: 244 GFDDNLKVYSW 254
G D +V W
Sbjct: 288 GGAD-AQVLVW 297
Score = 284 (105.0 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 64/239 (26%), Positives = 114/239 (47%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTA-LMSLCGLSSPVDSVAFDSA 69
F H A + C+ + T D + LW++ KP A G V S+ F S
Sbjct: 14 FKGHKAAITSADFSPN-CKQIATASWDTFLMLWSL-KPHARAYRYVGHKDVVTSLQF-SP 70
Query: 70 EVLVLAGASTG-VIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWD 128
+ +LA AS ++LW L+ H + +V+F G+F + D ++K+W
Sbjct: 71 QGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWS 130
Query: 129 IRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIR 188
+ ++ +++ HT + +F+PDGR +VS D +K+WD T+ + +++F G
Sbjct: 131 MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFAN 190
Query: 189 SIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD 247
+DF P +A+ +D V+ WD+ L+ + GV+ ++FHP G +L + D
Sbjct: 191 FVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSD 249
Score = 238 (88.8 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 54/201 (26%), Positives = 95/201 (47%)
Query: 56 GLSSPVDSVAFDSAEVLVLAGASTGV-IKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEF 114
G + + S F S +A AS + LW L+ GHK T+++F P G
Sbjct: 16 GHKAAITSADF-SPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNL 74
Query: 115 FASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAG 174
AS D +++W + +KG +K HT + ++ F+ DG+++V+ D +KVW +
Sbjct: 75 LASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQ 134
Query: 175 KLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITF 234
+ L+ H +R F P L+ + S D+T+K WD + + + + V + + F
Sbjct: 135 RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDF 194
Query: 235 HPDGRTLFSGFDDNLKVYSWE 255
P+G + S D+ V W+
Sbjct: 195 SPNGTCIASAGSDHA-VRIWD 214
Score = 227 (85.0 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 56/209 (26%), Positives = 96/209 (45%)
Query: 88 EESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINT 147
E+ + R GHK+ T+ +F P + A+ DT L +W ++ + Y GH + +
Sbjct: 6 EDPILERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTS 65
Query: 148 IRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRT 207
++F+P G + S D V++W L +FK H +RS+DF L T S D++
Sbjct: 66 LQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKS 125
Query: 208 VKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN-LKVYSWEPVICHD--SVD 264
+K W + + S V F PDGR + S +D +K++ C + S
Sbjct: 126 IKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDS 185
Query: 265 MGWSTLGDLCINDGKLLGCSFYRNSVGIW 293
+G++ D N G + + ++V IW
Sbjct: 186 VGFANFVDFSPN-GTCIASAGSDHAVRIW 213
Score = 44 (20.5 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 14/61 (22%), Positives = 27/61 (44%)
Query: 599 DVTPQTTLSSNEDHVANVTSQTRLNGNEYQAATAPQQTRLSSNIDPVANVTPQTLPSGNE 658
D+ P+T +ED + +L + +++ P LS + V + T + +P E
Sbjct: 327 DIYPRTP-HGHEDKRETIEINPKLEVMDLHSSSPPVVDVLSFDSTTVTDSTCRAVPGKGE 385
Query: 659 D 659
D
Sbjct: 386 D 386
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 285 (105.4 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 64/254 (25%), Positives = 124/254 (48%)
Query: 4 RGYKLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
R +KL ++ H V +++ + ++ +G D+ + +W + ++L G S V
Sbjct: 189 RPWKLMRVISGHLGWVRALAV-EPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVR 247
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
+A + + A ++K WDLE +K++R GH S + HP + +G D
Sbjct: 248 GLAVSPRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDG 307
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
++WD+R + IH GHT ++ + V++G D+ V++WDL AGK +
Sbjct: 308 VARVWDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVLTH 367
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLF 242
H+ +R++ HP EF A+GSA ++K W + + + ++ ++ + D F
Sbjct: 368 HKKGVRALATHPTEFTFASGSAG-SIKQWKCPEGAFMQNFEGHNSIINTLSVN-DQNVFF 425
Query: 243 SGFDD-NLKVYSWE 255
SG D+ ++ + W+
Sbjct: 426 SGADNGSMSFWDWK 439
Score = 264 (98.0 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 69/254 (27%), Positives = 106/254 (41%)
Query: 47 KPTALMS-LCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTA 105
+P LM + G V ++A + +GA IK+WDL ++ TLTGH S
Sbjct: 189 RPWKLMRVISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRG 248
Query: 106 VEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNV 165
+ P + S D +K WD+ I Y GH G+ T+ P +V+GG D V
Sbjct: 249 LAVSPRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGV 308
Query: 166 VKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPE 225
+VWD+ +H H G + + + + TGS D TV+ WDL + +G
Sbjct: 309 ARVWDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVLTHH 368
Query: 226 VTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSF 285
GV A+ HP T SG ++K + + + S + L +ND +
Sbjct: 369 KKGVRALATHPTEFTFASGSAGSIKQWKCPEGAFMQNFEGHNSIINTLSVNDQNVFFSGA 428
Query: 286 YRNSVGIWVADVSH 299
S+ W H
Sbjct: 429 DNGSMSFWDWKTGH 442
Score = 186 (70.5 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 56/225 (24%), Positives = 92/225 (40%)
Query: 8 LQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFD 67
++ + H + V +++ L+TGG D +W + + + L G + V +
Sbjct: 278 IRHYHGHLSGVYTLAL-HPTLDVLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVSELVCQ 336
Query: 68 SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIW 127
A+ V+ G+ +++WDL K + LT HK A+ HP FASG + +K W
Sbjct: 337 EADPQVITGSLDSTVRMWDLAAGKTMGVLTHHKKGVRALATHPTEFTFASGSAGS-IKQW 395
Query: 128 DIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLH--DFKFHEG 185
+ + ++GH INT+ D SG + + WD G D G
Sbjct: 396 KCPEGAFMQNFEGHNSIINTLSVN-DQNVFFSGADNGSMSFWDWKTGHRFQSLDTTAQPG 454
Query: 186 HIRSID------FHPLEFLLATGSADRTVKFWDLETFELIGSTRP 224
+++ F L G AD+T+K W E E T P
Sbjct: 455 SLQAESGIFTSTFDQSGSRLICGEADKTIKIWK-EDMEATPETHP 498
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 243 (90.6 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 65/253 (25%), Positives = 114/253 (45%)
Query: 13 AHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKP-----TALMSLCGLSSPVDSVAFD 67
AH+ V I+ ++T D+ + LW + K A L G S V+ V
Sbjct: 13 AHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLS 72
Query: 68 SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIW 127
S L+G+ G ++LWDL + R GH + +V F S D +K+W
Sbjct: 73 SDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Query: 128 DIRKKGCIHTYK---GHTRGINTIRFTPDGR--WVVSGGFDNVVKVWDLTAGKLLHDFKF 182
+ + C +T GH ++ +RF+P+ +VS +D VKVW+L KL +
Sbjct: 133 NTLGE-CKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVG 191
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLF 242
H G++ ++ P L A+G D + WDL + + S +H++ F P+ L
Sbjct: 192 HSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSI-IHSLCFSPNRYWLC 250
Query: 243 SGFDDNLKVYSWE 255
+ +++++++ E
Sbjct: 251 AATENSIRIWDLE 263
Score = 239 (89.2 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 65/239 (27%), Positives = 112/239 (46%)
Query: 67 DSAEVLVLAGASTGVIKLWDL-EESKMV----RTLTGHKSNCTAVEFHPFGEFFASGCMD 121
D+++++V A +I LW L ++ K R LTGH V G+F SG D
Sbjct: 26 DNSDIIVTASRDKSII-LWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD 84
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
L++WD+ + GHT+ + ++ F+ D R +VS D +K+W+ T G+ +
Sbjct: 85 GELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN-TLGECKYTIS 143
Query: 182 FHEGH---IRSIDFHPLEFL--LATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHP 236
+GH + + F P + + + S D+TVK W+L+ +L S ++ + P
Sbjct: 144 EGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSP 203
Query: 237 DGRTLFSGFDDNLKVYSWEPVICHD--SVDMGWSTLGDLCINDGKLLGCSFYRNSVGIW 293
DG SG D + + W+ S++ G S + LC + + C+ NS+ IW
Sbjct: 204 DGSLCASGGKDGV-ILLWDLAEGKKLYSLEAG-SIIHSLCFSPNRYWLCAATENSIRIW 260
Score = 227 (85.0 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 59/219 (26%), Positives = 102/219 (46%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G + HS V + + +F ++G D ++ LW + G + V SV
Sbjct: 53 GVAQRRLTGHSHFVEDVVLSSDG-QFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSV 111
Query: 65 AFDSAEVLVLAGASTGVIKLWD-LEESKM-VRTLTGHKSNCTAVEFHP--FGEFFASGCM 120
AF + +++ + IKLW+ L E K + GHK + V F P S
Sbjct: 112 AFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASW 171
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
D +K+W+++ ++ GH+ +NT+ +PDG SGG D V+ +WDL GK L+
Sbjct: 172 DKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL 231
Query: 181 KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELI 219
+ I S+ F P + L + + +++ WDLE+ ++
Sbjct: 232 EAGS-IIHSLCFSPNRYWLCAAT-ENSIRIWDLESKSVV 268
Score = 161 (61.7 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 46/182 (25%), Positives = 89/182 (48%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLW-AIGKPTALMSLC-GLSSPVD 62
G + FV H+ +V ++ R +++ D+ + LW +G+ +S G V
Sbjct: 95 GETTRRFVGHTKDVLSVAFSTDN-RQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVS 153
Query: 63 SVAFDSAEVLV--LAGASTG-VIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGC 119
V F S LV + AS +K+W+L+ K+ +L GH V P G ASG
Sbjct: 154 CVRF-SPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGG 212
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
D + +WD+ + +++ + + I+++ F+P+ W+ + +N +++WDL + ++ D
Sbjct: 213 KDGVILLWDLAEGKKLYSLEAGSI-IHSLCFSPNRYWLCAAT-ENSIRIWDLESKSVVED 270
Query: 180 FK 181
K
Sbjct: 271 LK 272
Score = 49 (22.3 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 231 AITFHPDGRTLFSGFDDNLKVYSW 254
++ + DG TLFSG+ D + V W
Sbjct: 299 SLNWSADGSTLFSGYTDGV-VRVW 321
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 279 (103.3 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 64/225 (28%), Positives = 113/225 (50%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++G DD + +W+ L +L G + V S + ++++G++ +K+W+ E
Sbjct: 274 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETG 331
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ + TL GH S + H + SG D L++WDI C+H GH + +++
Sbjct: 332 ECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 389
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
DGR VVSG +D +VKVWD LH + H + S+ F + + +GS D +++
Sbjct: 390 --DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRV 445
Query: 211 WDLETFELIGSTRPEVTGVHAITFHPD--GRTLFSG-FDDNLKVY 252
WD+ET G+ +TG ++T + L SG D +K++
Sbjct: 446 WDVET----GNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIW 486
Score = 276 (102.2 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 67/221 (30%), Positives = 113/221 (51%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A+ G + H++ V C+ + +K +++G D + +W I L L G + V
Sbjct: 328 AETGECIHTLYGHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAAV 384
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
V +D V+ +GA ++K+WD E + TL GH + +++F G SG +D
Sbjct: 385 RCVQYDGRRVV--SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLD 440
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
T++++WD+ CIHT GH + + + D +VSG D+ VK+WD+ G+ L +
Sbjct: 441 TSIRVWDVETGNCIHTLTGH-QSLTSGMELKDNI-LVSGNADSTVKIWDIKTGQCLQTLQ 498
Query: 182 F---HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELI 219
H+ + + F+ F++ T S D TVK WDL+T E I
Sbjct: 499 GPNKHQSAVTCLQFNK-NFVI-TSSDDGTVKLWDLKTGEFI 537
Score = 268 (99.4 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 61/214 (28%), Positives = 107/214 (50%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A G L+ V H+ V + +I+G D+ + +W + +L G +S V
Sbjct: 288 AVTGKCLRTLVGHTGGVWSSQMRDN---IIISGSTDRTLKVWNAETGECIHTLYGHTSTV 344
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
+ E V++G+ +++WD+E + + L GH + V++ G SG D
Sbjct: 345 RCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYD 400
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+K+WD + C+HT +GHT + +++F DG VVSG D ++VWD+ G +H
Sbjct: 401 FMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT 458
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET 215
H+ ++ + +L +G+AD TVK WD++T
Sbjct: 459 GHQSLTSGMELK--DNILVSGNADSTVKIWDIKT 490
Score = 217 (81.4 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 53/178 (29%), Positives = 90/178 (50%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G L + H A V C+ R +++G D V +W T L +L G ++ V S+
Sbjct: 371 GQCLHVLMGHVAAVRCVQYDG---RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 427
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
FD + V++G+ I++WD+E + TLTGH+S + +E SG D+ +
Sbjct: 428 QFDG--IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTV 483
Query: 125 KIWDIRKKGCIHTYKG---HTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
KIWDI+ C+ T +G H + ++F + +V++ D VK+WDL G+ + +
Sbjct: 484 KIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRN 539
Score = 214 (80.4 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 53/174 (30%), Positives = 84/174 (48%)
Query: 85 WDLEESKMVRTLTGHKSNC-TAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTR 143
W E K + L GH + T ++F G SG D LK+W C+ T GHT
Sbjct: 245 WRRGELKSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 302
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGS 203
G+ + + + ++SG D +KVW+ G+ +H H +R + H E + +GS
Sbjct: 303 GVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGS 358
Query: 204 ADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEP 256
D T++ WD+ET + + V V + + DGR + SG +D +KV W+P
Sbjct: 359 RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKV--WDP 408
Score = 156 (60.0 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 50/176 (28%), Positives = 79/176 (44%)
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
+DTN + +++ + + H I ++F G +VSG DN +KVW GK L
Sbjct: 241 IDTNWRRGELKSPKVLKGHDDHV--ITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRT 296
Query: 180 FKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGR 239
H G + S + ++ +GS DRT+K W+ ET E I + + V + H + R
Sbjct: 297 LVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH-EKR 353
Query: 240 TLFSGFDDNLKVYSWEPVIC-HDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIW 293
+ D L+V+ E C H V MG C+ DG+ + Y V +W
Sbjct: 354 VVSGSRDATLRVWDIETGQCLH--VLMG-HVAAVRCVQYDGRRVVSGAYDFMVKVW 406
Score = 55 (24.4 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 6 YKLQEFVAHSANVNCISIGKKACR 29
YK++ + H + V S+GKK C+
Sbjct: 46 YKMKRKLDHGSEVRSFSLGKKPCK 69
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 279 (103.3 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 64/225 (28%), Positives = 113/225 (50%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++G DD + +W+ L +L G + V S + ++++G++ +K+W+ E
Sbjct: 316 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETG 373
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ + TL GH S + H + SG D L++WDI C+H GH + +++
Sbjct: 374 ECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 431
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
DGR VVSG +D +VKVWD LH + H + S+ F + + +GS D +++
Sbjct: 432 --DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRV 487
Query: 211 WDLETFELIGSTRPEVTGVHAITFHPD--GRTLFSG-FDDNLKVY 252
WD+ET G+ +TG ++T + L SG D +K++
Sbjct: 488 WDVET----GNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIW 528
Score = 276 (102.2 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 67/221 (30%), Positives = 113/221 (51%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A+ G + H++ V C+ + +K +++G D + +W I L L G + V
Sbjct: 370 AETGECIHTLYGHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAAV 426
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
V +D V+ +GA ++K+WD E + TL GH + +++F G SG +D
Sbjct: 427 RCVQYDGRRVV--SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLD 482
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
T++++WD+ CIHT GH + + + D +VSG D+ VK+WD+ G+ L +
Sbjct: 483 TSIRVWDVETGNCIHTLTGH-QSLTSGMELKDNI-LVSGNADSTVKIWDIKTGQCLQTLQ 540
Query: 182 F---HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELI 219
H+ + + F+ F++ T S D TVK WDL+T E I
Sbjct: 541 GPSKHQSAVTCLQFNK-NFVI-TSSDDGTVKLWDLKTGEFI 579
Score = 269 (99.8 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 66/254 (25%), Positives = 120/254 (47%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A G L+ V H+ V + +I+G D+ + +W + +L G +S V
Sbjct: 330 AVTGKCLRTLVGHTGGVWSSQMRDN---IIISGSTDRTLKVWNAETGECIHTLYGHTSTV 386
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
+ E V++G+ +++WD+E + + L GH + V++ G SG D
Sbjct: 387 RCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYD 442
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+K+WD + C+HT +GHT + +++F DG VVSG D ++VWD+ G +H
Sbjct: 443 FMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT 500
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTL 241
H+ ++ + +L +G+AD TVK WD++T + + + + A+T +
Sbjct: 501 GHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNF 558
Query: 242 FSGFDDNLKVYSWE 255
D+ V W+
Sbjct: 559 VITSSDDGTVKLWD 572
Score = 217 (81.4 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 53/178 (29%), Positives = 90/178 (50%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G L + H A V C+ R +++G D V +W T L +L G ++ V S+
Sbjct: 413 GQCLHVLMGHVAAVRCVQYDG---RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 469
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
FD + V++G+ I++WD+E + TLTGH+S + +E SG D+ +
Sbjct: 470 QFDG--IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTV 525
Query: 125 KIWDIRKKGCIHTYKG---HTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
KIWDI+ C+ T +G H + ++F + +V++ D VK+WDL G+ + +
Sbjct: 526 KIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRN 581
Score = 211 (79.3 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 52/174 (29%), Positives = 84/174 (48%)
Query: 85 WDLEESKMVRTLTGHKSNC-TAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTR 143
W E + + L GH + T ++F G SG D LK+W C+ T GHT
Sbjct: 287 WRRGELRSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 344
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGS 203
G+ + + + ++SG D +KVW+ G+ +H H +R + H E + +GS
Sbjct: 345 GVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGS 400
Query: 204 ADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEP 256
D T++ WD+ET + + V V + + DGR + SG +D +KV W+P
Sbjct: 401 RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKV--WDP 450
Score = 159 (61.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 51/176 (28%), Positives = 79/176 (44%)
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
+DTN + ++R + + H I ++F G +VSG DN +KVW GK L
Sbjct: 283 IDTNWRRGELRSPKVLKGHDDHV--ITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRT 338
Query: 180 FKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGR 239
H G + S + ++ +GS DRT+K W+ ET E I + + V + H + R
Sbjct: 339 LVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH-EKR 395
Query: 240 TLFSGFDDNLKVYSWEPVIC-HDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIW 293
+ D L+V+ E C H V MG C+ DG+ + Y V +W
Sbjct: 396 VVSGSRDATLRVWDIETGQCLH--VLMG-HVAAVRCVQYDGRRVVSGAYDFMVKVW 448
Score = 55 (24.4 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 6 YKLQEFVAHSANVNCISIGKKACR 29
YK++ + H + V S+GKK C+
Sbjct: 88 YKMKRKLDHGSEVRSFSLGKKPCK 111
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 288 (106.4 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 60/216 (27%), Positives = 107/216 (49%)
Query: 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
K +L+ HS V S +L++ +D V LW++ T L+ G + PV
Sbjct: 532 KTASELKILYGHSGPVYGASFSPDR-NYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVW 590
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
F ++G V +LW + + +R GH ++ +HP + A+G D
Sbjct: 591 DTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADR 650
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
+++WD+ C+ + GH I+++ F+P+GR++ +G D V +WD+ G ++ + K
Sbjct: 651 TVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKG 710
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWD-LETFE 217
H + S+ F +LA+GS D TV+ WD ++ FE
Sbjct: 711 HTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFE 746
Score = 277 (102.6 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 62/214 (28%), Positives = 99/214 (46%)
Query: 51 LMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHP 110
L L G S PV +F +L+ + G ++LW L+ + GH +F P
Sbjct: 537 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 596
Query: 111 FGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
+G +F SG D ++W + + GH +N R+ P+ +V +G D V++WD
Sbjct: 597 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWD 656
Query: 171 LTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVH 230
+ G + F H+G I S+ F P LATG+ D V WD+ ++G + V
Sbjct: 657 VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVC 716
Query: 231 AITFHPDGRTLFSGFDDNLKVYSWEPVICHDSVD 264
++ F DG L SG DN V W+ V + ++
Sbjct: 717 SLRFSRDGEILASGSMDNT-VRLWDAVKAFEDLE 749
Score = 261 (96.9 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 77/271 (28%), Positives = 129/271 (47%)
Query: 31 LITGG-DDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
LI GG D V +W++ P L S+ +S + + +S +VL ++ D +
Sbjct: 485 LIAGGFADSTVRVWSV-TPKKLRSV-KQASDLSLIDKESDDVLE---------RIMDEKT 533
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
+ ++ L GH F P + S D +++W ++ C+ YKGH + +
Sbjct: 534 ASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ 593
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
F+P G + VSGG D V ++W + L F H + +HP +ATGSADRTV+
Sbjct: 594 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVR 653
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVICHDSV--DM-G 266
WD+ + +H++TF P+GR L +G D +V W+ I H + ++ G
Sbjct: 654 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RVLLWD--IGHGLMVGELKG 710
Query: 267 WS-TLGDLCIN-DGKLLGCSFYRNSVGIWVA 295
+ T+ L + DG++L N+V +W A
Sbjct: 711 HTDTVCSLRFSRDGEILASGSMDNTVRLWDA 741
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 278 (102.9 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 71/274 (25%), Positives = 124/274 (45%)
Query: 60 PVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFH-PFGEFFASG 118
P+ +VA + + + G+ KLWD + + TL GH++ A+ F+ P+G+ A+G
Sbjct: 94 PLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATG 153
Query: 119 CMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLH 178
D K+W + C HT++GHT I + F P V +G D K+WD+ +G+ +
Sbjct: 154 SFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVF 213
Query: 179 DFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDG 238
H I S+ F+ + TGS D TV W+ +T + + + + F+ D
Sbjct: 214 TLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDC 273
Query: 239 RTLFSG-FDDNLKVYSWEPVI--CHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWV 294
+ +G D K+ W+ V C ++ + D C + GKL+ + + I+
Sbjct: 274 SLILTGSMDKTCKL--WDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFS 331
Query: 295 ADVSHVEPYGVGAPEPDQSICTEVKFNPPGSHSL 328
A V E + +++ FNP G+ L
Sbjct: 332 AATREC----VTKLEGHEGEISKISFNPQGNRLL 361
Score = 270 (100.1 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 64/208 (30%), Positives = 100/208 (48%)
Query: 6 YKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVA 65
Y + AH + +++ K F ITG D+ LW L +L G + V ++A
Sbjct: 83 YLFKVLRAHILPLTNVALNKSGSCF-ITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIA 141
Query: 66 FDSAEVLVLA-GASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
F++ +A G+ KLW +E K T GH + + F+P A+G MDT
Sbjct: 142 FNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTA 201
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
K+WDI+ + T GH+ I ++ F G +++G FD+ V VW+ G+ ++ H
Sbjct: 202 KLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHC 261
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWD 212
I S F+ L+ TGS D+T K WD
Sbjct: 262 AEISSAVFNWDCSLILTGSMDKTCKLWD 289
Score = 260 (96.6 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 71/292 (24%), Positives = 123/292 (42%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G +L H V I+ + TG D+ LW++ + G ++ + +
Sbjct: 124 GEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCL 183
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
+F+ LV G+ KLWD++ + V TLTGH + ++ F+ G +G D +
Sbjct: 184 SFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTV 243
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
+W+ ++T GH I++ F D +++G D K+WD GK + H+
Sbjct: 244 TVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHD 303
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG 244
I F L+AT SAD T + + T E + + I+F+P G L +G
Sbjct: 304 DEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTG 363
Query: 245 FDDNL-KVYSWEPVIC------H-DSV-DMGWSTLGDLCINDGKLLGCSFYR 287
D +++ + C H D + ++ GD+ I K C +R
Sbjct: 364 SSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIWR 415
Score = 238 (88.8 bits), Expect = 9.0e-17, P = 9.0e-17
Identities = 51/166 (30%), Positives = 80/166 (48%)
Query: 92 MVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFT 151
+ + L H T V + G F +G D K+WD +HT +GH + I F
Sbjct: 84 LFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 152 -PDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
P G + +G FD K+W + GK H F+ H I + F+P L+ATGS D T K
Sbjct: 144 NPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKL 203
Query: 211 WDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWE 255
WD+++ E + + + +++F+ G + +G FD + V WE
Sbjct: 204 WDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTV--WE 247
Score = 151 (58.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 42/168 (25%), Positives = 80/168 (47%)
Query: 139 KGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFH-PLEF 197
+ H + + G ++G +D K+WD +G+ LH + H + +I F+ P
Sbjct: 89 RAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGD 148
Query: 198 LLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVY---S 253
+ATGS D+T K W +ET + + R + ++F+P + +G D K++ S
Sbjct: 149 KIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQS 208
Query: 254 WEPVIC---HDS--VDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVAD 296
E V H + + + ++T G+ +++ SF ++V +W AD
Sbjct: 209 GEEVFTLTGHSAEIISLSFNTSGN------RIITGSF-DHTVTVWEAD 249
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 282 (104.3 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 63/224 (28%), Positives = 106/224 (47%)
Query: 33 TGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKM 92
TG D+ + +W + ++L G V +A + + + +K WDLE++K+
Sbjct: 193 TGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKV 252
Query: 93 VRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTP 152
+R+ GH S + HP + +G D+ ++WDIR K I GH + ++ P
Sbjct: 253 IRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRP 312
Query: 153 DGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
VV+G D +K WDL GK + H+ +R++ HP E A+ SAD T KF
Sbjct: 313 TDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKKF-S 371
Query: 213 LETFELIGST-RPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
L E + + T ++A+ + DG + G DN ++ W+
Sbjct: 372 LPKGEFCHNMLSQQKTIINAMAVNEDGVMVTGG--DNGSIWFWD 413
Score = 273 (101.2 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 62/234 (26%), Positives = 105/234 (44%)
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
V SVAFD + G++ IK+WD+ + TLTGH + + S
Sbjct: 179 VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGD 238
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
D +K WD+ + I +Y GH G+ + P +++GG D+V +VWD+ +
Sbjct: 239 DKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFAL 298
Query: 181 KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
H+ + S+ P + + TGS D T+KFWDL + + + V A+T HP
Sbjct: 299 SGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENA 358
Query: 241 LFSGFDDNLKVYSW-EPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIW 293
S DN K +S + CH+ + + + + +N+ ++ S+ W
Sbjct: 359 FASASADNTKKFSLPKGEFCHNMLSQQKTIINAMAVNEDGVMVTGGDNGSIWFW 412
Score = 182 (69.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 56/249 (22%), Positives = 103/249 (41%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H V +++ + ++ + GDD++V W + + + S G S V +A ++
Sbjct: 217 HIEQVRGLAVSNRHT-YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVL 275
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
L G V ++WD+ + L+GH + +V P +G DT +K WD+R
Sbjct: 276 LTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGK 335
Query: 134 CIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFH 193
+ T H + + + P S DN K + L G+ H+ + I +
Sbjct: 336 TMSTLTHHKKSVRAMTLHPKENAFASASADNTKK-FSLPKGEFCHNMLSQQKTIINAMAV 394
Query: 194 PLEFLLATGSADRTVKFWDL---------ETFELIGSTRPEVTGVHAITFHPDGRTLFS- 243
+ ++ TG + ++ FWD ET GS E G++A + G L +
Sbjct: 395 NEDGVMVTGGDNGSIWFWDWKSGHSFQQSETIVQPGSLESEA-GIYAACYDNTGSRLVTC 453
Query: 244 GFDDNLKVY 252
D +K++
Sbjct: 454 EADKTIKMW 462
Score = 181 (68.8 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 42/163 (25%), Positives = 69/163 (42%)
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
K R + GH +V F P E+F +G D +KIWD+ T GH + +
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAV 226
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
+ ++ S G D VK WDL K++ + H + + HP +L TG D +
Sbjct: 227 SNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRV 286
Query: 211 WDLET-FELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVY 252
WD+ T ++ + + T T D + + D +K +
Sbjct: 287 WDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 329
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 279 (103.3 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 64/225 (28%), Positives = 113/225 (50%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++G DD + +W+ L +L G + V S + ++++G++ +K+W+ E
Sbjct: 314 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETG 371
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ + TL GH S + H + SG D L++WDI C+H GH + +++
Sbjct: 372 ECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 429
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
DGR VVSG +D +VKVWD LH + H + S+ F + + +GS D +++
Sbjct: 430 --DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRV 485
Query: 211 WDLETFELIGSTRPEVTGVHAITFHPD--GRTLFSG-FDDNLKVY 252
WD+ET G+ +TG ++T + L SG D +K++
Sbjct: 486 WDVET----GNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIW 526
Score = 276 (102.2 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 67/221 (30%), Positives = 113/221 (51%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A+ G + H++ V C+ + +K +++G D + +W I L L G + V
Sbjct: 368 AETGECIHTLYGHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAAV 424
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
V +D V+ +GA ++K+WD E + TL GH + +++F G SG +D
Sbjct: 425 RCVQYDGRRVV--SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLD 480
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
T++++WD+ CIHT GH + + + D +VSG D+ VK+WD+ G+ L +
Sbjct: 481 TSIRVWDVETGNCIHTLTGH-QSLTSGMELKDNI-LVSGNADSTVKIWDIKTGQCLQTLQ 538
Query: 182 F---HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELI 219
H+ + + F+ F++ T S D TVK WDL+T E I
Sbjct: 539 GPNKHQSAVTCLQFNK-NFVI-TSSDDGTVKLWDLKTGEFI 577
Score = 268 (99.4 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 61/214 (28%), Positives = 107/214 (50%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A G L+ V H+ V + +I+G D+ + +W + +L G +S V
Sbjct: 328 AVTGKCLRTLVGHTGGVWSSQMRDN---IIISGSTDRTLKVWNAETGECIHTLYGHTSTV 384
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
+ E V++G+ +++WD+E + + L GH + V++ G SG D
Sbjct: 385 RCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYD 440
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+K+WD + C+HT +GHT + +++F DG VVSG D ++VWD+ G +H
Sbjct: 441 FMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT 498
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET 215
H+ ++ + +L +G+AD TVK WD++T
Sbjct: 499 GHQSLTSGMELK--DNILVSGNADSTVKIWDIKT 530
Score = 217 (81.4 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 53/178 (29%), Positives = 90/178 (50%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G L + H A V C+ R +++G D V +W T L +L G ++ V S+
Sbjct: 411 GQCLHVLMGHVAAVRCVQYDG---RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 467
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
FD + V++G+ I++WD+E + TLTGH+S + +E SG D+ +
Sbjct: 468 QFDG--IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTV 523
Query: 125 KIWDIRKKGCIHTYKG---HTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
KIWDI+ C+ T +G H + ++F + +V++ D VK+WDL G+ + +
Sbjct: 524 KIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRN 579
Score = 214 (80.4 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 53/174 (30%), Positives = 84/174 (48%)
Query: 85 WDLEESKMVRTLTGHKSNC-TAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTR 143
W E K + L GH + T ++F G SG D LK+W C+ T GHT
Sbjct: 285 WRRGELKSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 342
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGS 203
G+ + + + ++SG D +KVW+ G+ +H H +R + H E + +GS
Sbjct: 343 GVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGS 398
Query: 204 ADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEP 256
D T++ WD+ET + + V V + + DGR + SG +D +KV W+P
Sbjct: 399 RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKV--WDP 448
Score = 156 (60.0 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 50/176 (28%), Positives = 79/176 (44%)
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
+DTN + +++ + + H I ++F G +VSG DN +KVW GK L
Sbjct: 281 IDTNWRRGELKSPKVLKGHDDHV--ITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRT 336
Query: 180 FKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGR 239
H G + S + ++ +GS DRT+K W+ ET E I + + V + H + R
Sbjct: 337 LVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH-EKR 393
Query: 240 TLFSGFDDNLKVYSWEPVIC-HDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIW 293
+ D L+V+ E C H V MG C+ DG+ + Y V +W
Sbjct: 394 VVSGSRDATLRVWDIETGQCLH--VLMG-HVAAVRCVQYDGRRVVSGAYDFMVKVW 446
Score = 55 (24.4 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 6 YKLQEFVAHSANVNCISIGKKACR 29
YK++ + H + V S+GKK C+
Sbjct: 86 YKMKRKLDHGSEVRSFSLGKKPCK 109
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 279 (103.3 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 64/225 (28%), Positives = 113/225 (50%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++G DD + +W+ L +L G + V S + ++++G++ +K+W+ E
Sbjct: 316 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETG 373
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ + TL GH S + H + SG D L++WDI C+H GH + +++
Sbjct: 374 ECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 431
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
DGR VVSG +D +VKVWD LH + H + S+ F + + +GS D +++
Sbjct: 432 --DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRV 487
Query: 211 WDLETFELIGSTRPEVTGVHAITFHPD--GRTLFSG-FDDNLKVY 252
WD+ET G+ +TG ++T + L SG D +K++
Sbjct: 488 WDVET----GNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIW 528
Score = 276 (102.2 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 67/221 (30%), Positives = 113/221 (51%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A+ G + H++ V C+ + +K +++G D + +W I L L G + V
Sbjct: 370 AETGECIHTLYGHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAAV 426
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
V +D V+ +GA ++K+WD E + TL GH + +++F G SG +D
Sbjct: 427 RCVQYDGRRVV--SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLD 482
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
T++++WD+ CIHT GH + + + D +VSG D+ VK+WD+ G+ L +
Sbjct: 483 TSIRVWDVETGNCIHTLTGH-QSLTSGMELKDNI-LVSGNADSTVKIWDIKTGQCLQTLQ 540
Query: 182 F---HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELI 219
H+ + + F+ F++ T S D TVK WDL+T E I
Sbjct: 541 GPSKHQSAVTCLQFNK-NFVI-TSSDDGTVKLWDLKTGEFI 579
Score = 269 (99.8 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 66/254 (25%), Positives = 120/254 (47%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A G L+ V H+ V + +I+G D+ + +W + +L G +S V
Sbjct: 330 AVTGKCLRTLVGHTGGVWSSQMRDN---IIISGSTDRTLKVWNAETGECIHTLYGHTSTV 386
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
+ E V++G+ +++WD+E + + L GH + V++ G SG D
Sbjct: 387 RCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYD 442
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+K+WD + C+HT +GHT + +++F DG VVSG D ++VWD+ G +H
Sbjct: 443 FMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT 500
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTL 241
H+ ++ + +L +G+AD TVK WD++T + + + + A+T +
Sbjct: 501 GHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNF 558
Query: 242 FSGFDDNLKVYSWE 255
D+ V W+
Sbjct: 559 VITSSDDGTVKLWD 572
Score = 217 (81.4 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 53/178 (29%), Positives = 90/178 (50%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G L + H A V C+ R +++G D V +W T L +L G ++ V S+
Sbjct: 413 GQCLHVLMGHVAAVRCVQYDG---RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 469
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
FD + V++G+ I++WD+E + TLTGH+S + +E SG D+ +
Sbjct: 470 QFDG--IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTV 525
Query: 125 KIWDIRKKGCIHTYKG---HTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
KIWDI+ C+ T +G H + ++F + +V++ D VK+WDL G+ + +
Sbjct: 526 KIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRN 581
Score = 214 (80.4 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 53/174 (30%), Positives = 84/174 (48%)
Query: 85 WDLEESKMVRTLTGHKSNC-TAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTR 143
W E K + L GH + T ++F G SG D LK+W C+ T GHT
Sbjct: 287 WRRGELKSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 344
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGS 203
G+ + + + ++SG D +KVW+ G+ +H H +R + H E + +GS
Sbjct: 345 GVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGS 400
Query: 204 ADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEP 256
D T++ WD+ET + + V V + + DGR + SG +D +KV W+P
Sbjct: 401 RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKV--WDP 450
Score = 156 (60.0 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 50/176 (28%), Positives = 79/176 (44%)
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
+DTN + +++ + + H I ++F G +VSG DN +KVW GK L
Sbjct: 283 IDTNWRRGELKSPKVLKGHDDHV--ITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRT 338
Query: 180 FKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGR 239
H G + S + ++ +GS DRT+K W+ ET E I + + V + H + R
Sbjct: 339 LVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH-EKR 395
Query: 240 TLFSGFDDNLKVYSWEPVIC-HDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIW 293
+ D L+V+ E C H V MG C+ DG+ + Y V +W
Sbjct: 396 VVSGSRDATLRVWDIETGQCLH--VLMG-HVAAVRCVQYDGRRVVSGAYDFMVKVW 448
Score = 55 (24.4 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 6 YKLQEFVAHSANVNCISIGKKACR 29
YK++ + H + V S+GKK C+
Sbjct: 88 YKMKRKLDHGSEVRSFSLGKKPCK 111
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 280 (103.6 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 64/196 (32%), Positives = 98/196 (50%)
Query: 67 DSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKI 126
DS ++ + GA+ + LW +S + L GH + V FHP G++ S DT ++
Sbjct: 232 DSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRL 291
Query: 127 WDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGH 186
WD+ + +GH+ GI +I PDG V SGG D + ++WDL +GK + H
Sbjct: 292 WDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQ 351
Query: 187 IRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLF---S 243
I ++ + P + LAT SAD TVK WDL L + + V + + G F S
Sbjct: 352 IVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATS 411
Query: 244 GFDDNLKVYSWEPVIC 259
G+D +K+ W P+ C
Sbjct: 412 GYDGCVKL--WNPLNC 425
Score = 235 (87.8 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 56/212 (26%), Positives = 95/212 (44%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A + L H A V ++ +L++ D LW + L+ G S +
Sbjct: 252 ASQSTPLLRLEGHLARVGRVAFHPSG-DYLVSASFDTTWRLWDVHTGVELLMQEGHSEGI 310
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
S+A LV +G + + ++WDL K + L H A+ + P G A+ D
Sbjct: 311 FSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSAD 370
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDG--RWVVSGGFDNVVKVWDLTAGKLLHD 179
+KIWD+RK HT H+ ++ +R+ G R++ + G+D VK+W+ L+
Sbjct: 371 DTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWNPLNCSLIKS 430
Query: 180 FKFHEGHIRSIDFHPLEFLLATGSADRTVKFW 211
HE + S+D + F+ + DRT+K W
Sbjct: 431 MVGHEEKVMSVDGYGDRFI--SSGYDRTIKLW 460
Score = 231 (86.4 bits), Expect = 8.1e-16, P = 8.1e-16
Identities = 67/229 (29%), Positives = 100/229 (43%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFD-SAEVLVLAGASTGVIKLWDLEE 89
L TG D V LW + T L+ L G + V VAF S + LV A T +LWD+
Sbjct: 238 LATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDT-TWRLWDVHT 296
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
+ GH ++ P G +SG D +IWD+R I H R I +
Sbjct: 297 GVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMA 356
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDF--HPLEFLLATGSADRT 207
++P+G + + D+ VK+WDL L H H + + + + +AT D
Sbjct: 357 WSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGC 416
Query: 208 VKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEP 256
VK W+ LI S V ++ + D R + SG+D +K+ W P
Sbjct: 417 VKLWNPLNCSLIKSMVGHEEKVMSVDGYGD-RFISSGYDRTIKL--WYP 462
Score = 198 (74.8 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 63/269 (23%), Positives = 118/269 (43%)
Query: 39 KVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTG 98
K ++ + K + S G P+ V F + +G+ G +K+W+ + V+ G
Sbjct: 153 KSSIEHLQKAELMGSQIGGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRG 212
Query: 99 HKSNCTAVEFHPFGEFF---------ASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
H + ++++P + + A+G D + +W + + +GH + +
Sbjct: 213 HTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVA 272
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTAG-KLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTV 208
F P G ++VS FD ++WD+ G +LL EG I SI P L+++G D
Sbjct: 273 FHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEG-IFSIACQPDGSLVSSGGNDAIG 331
Query: 209 KFWDLETFELIGSTRPEVTGVHAITFHPDGRTLF-SGFDDNLKVYSWEPVICHDSVDMGW 267
+ WDL + + I + + A+ + P+G L S DD +K++ V ++
Sbjct: 332 RIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHS 391
Query: 268 STLGDL-CINDG--KLLGCSFYRNSVGIW 293
S + D+ I G + + S Y V +W
Sbjct: 392 SLVSDVRYIESGVNRFIATSGYDGCVKLW 420
Score = 156 (60.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 47/186 (25%), Positives = 85/186 (45%)
Query: 72 LVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRK 131
+VL+G S+ + L++++++ + G + V F G FASG +K+W+
Sbjct: 148 IVLSGKSS----IEHLQKAELMGSQIGGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDN 203
Query: 132 KGCIHTYKGHTRGINTIRFTPDGR-W--------VVSGGFDNVVKVWDLTAGKLLHDFKF 182
+ ++GHT ++ + + P + W + +G DN V +W + L +
Sbjct: 204 LSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEG 263
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWDLET-FELIGSTRPEVTGVHAITFHPDGRTL 241
H + + FHP L + S D T + WD+ T EL+ G+ +I PDG +
Sbjct: 264 HLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELL-MQEGHSEGIFSIACQPDGSLV 322
Query: 242 FSGFDD 247
SG +D
Sbjct: 323 SSGGND 328
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 62/229 (27%), Positives = 95/229 (41%)
Query: 82 IKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGH 141
I L+ LE++K+ R K E P E SG I ++K + + G
Sbjct: 122 IALYSLEKAKL-RL----KKEREISEI-PVPEIVLSG----KSSIEHLQKAELMGSQIGG 171
Query: 142 TRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL------ 195
R I +RF+ +G SG + VKVW+ + F+ H + +D++PL
Sbjct: 172 ERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDA 231
Query: 196 ---EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKV 251
+ LATG+AD TV W + + V + FHP G L S FD ++
Sbjct: 232 DSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRL 291
Query: 252 YSWEPVICHDSVDM----GWST--LGDLCINDGKLLGCSFYRNSVG-IW 293
W+ H V++ G S C DG L+ S +++G IW
Sbjct: 292 --WD---VHTGVELLMQEGHSEGIFSIACQPDGSLVS-SGGNDAIGRIW 334
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 281 (104.0 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 64/260 (24%), Positives = 121/260 (46%)
Query: 6 YKLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
+KL + H+ V + + + ++ +GG D+ + +W + +SL G S V +V
Sbjct: 174 WKLYRVASGHTGWVRAVDV-EPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAV 232
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
+ +G +K WDLE +K++R GH S A+ HP + + D+
Sbjct: 233 KVSPRHPFLFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDVLVTCARDSTA 292
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
++WD+R K +H + GHT + + V++ D V++WDL AG+ + H+
Sbjct: 293 RVWDMRTKAQVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRSMCTLTHHK 352
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG 244
+R++ HP + A+ S D +K W L E + + ++ ++ + DG + SG
Sbjct: 353 KSVRALTIHPRLNMFASASPDN-IKQWKLPKGEFMQNLSGHNAIINTLSSNDDG-VVVSG 410
Query: 245 FDD-NLKVYSWEPVICHDSV 263
D+ +L + W C +
Sbjct: 411 ADNGSLCFWDWRSGFCFQKI 430
Score = 190 (71.9 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 61/227 (26%), Positives = 94/227 (41%)
Query: 8 LQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFD 67
++ + H + V +S+ + L+T D +W + + G ++ V V
Sbjct: 261 IRHYHGHLSAVQALSV-HPSLDVLVTCARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQ 319
Query: 68 SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIW 127
S + V+ + ++LWDL + + TLT HK + A+ HP FAS D N+K W
Sbjct: 320 SVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKSVRALTIHPRLNMFASASPD-NIKQW 378
Query: 128 DIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF--KFHEG 185
+ K + GH INT+ DG VVSG + + WD +G K G
Sbjct: 379 KLPKGEFMQNLSGHNAIINTLSSNDDGV-VVSGADNGSLCFWDWRSGFCFQKIQTKPQPG 437
Query: 186 HIRSID------FHPLEFLLATGSADRTVKFWDLETFELIGSTRPEV 226
I S F L T AD+T+K + E E + P V
Sbjct: 438 SIESEAGIYASCFDKTGLRLITAEADKTIKMYK-EDDEATEESHPIV 483
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 279 (103.3 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 65/261 (24%), Positives = 122/261 (46%)
Query: 6 YKLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
+KL ++ H V +++ + +G D+ + +W + ++L G S V +
Sbjct: 133 WKLMRVISGHLGWVRSLAVEPNN-EWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGL 191
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
A + + ++K WDLE +K++R GH S + HP + +G D
Sbjct: 192 AVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVA 251
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
++WD+R + IH GHT + ++ V++G D V++WDL AGK + H+
Sbjct: 252 RVWDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGVLTHHK 311
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG 244
IRS+ HP EF A+ S ++K W E + + ++ ++ + D LFSG
Sbjct: 312 KGIRSLATHPREFTFASASTG-SIKQWKCPGGEFMQNFEGHNAIINTLSVNEDN-VLFSG 369
Query: 245 FDD-NLKVYSWEPVICHDSVD 264
D+ ++ + W+ + ++D
Sbjct: 370 GDNGSMSFWDWKTGYRYQTID 390
Score = 240 (89.5 bits), Expect = 7.5e-17, P = 7.5e-17
Identities = 64/247 (25%), Positives = 103/247 (41%)
Query: 48 PTALMS-LCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAV 106
P LM + G V S+A + +GA IK+W+L + TLTGH S +
Sbjct: 132 PWKLMRVISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGL 191
Query: 107 EFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVV 166
P + S D +K WD+ I Y GH G+ T+ P +V+GG D V
Sbjct: 192 AVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVA 251
Query: 167 KVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEV 226
+VWD+ +H H G + + + + TGS D TV+ WDL + +G
Sbjct: 252 RVWDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGVLTHHK 311
Query: 227 TGVHAITFHPDGRTLFSGFDDNLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFY 286
G+ ++ HP T S ++K + + + + + L +N+ +L
Sbjct: 312 KGIRSLATHPREFTFASASTGSIKQWKCPGGEFMQNFEGHNAIINTLSVNEDNVLFSGGD 371
Query: 287 RNSVGIW 293
S+ W
Sbjct: 372 NGSMSFW 378
Score = 184 (69.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 61/241 (25%), Positives = 99/241 (41%)
Query: 8 LQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFD 67
++ + H + V +++ + L+TGG D +W + + + L G + V V
Sbjct: 220 IRHYHGHLSGVYTLALHPRL-DLLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQ 278
Query: 68 SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIW 127
A+ V+ G+ ++LWDL K + LT HK ++ HP EF + ++K W
Sbjct: 279 EADPQVITGSLDATVRLWDLAAGKTMGVLTHHKKGIRSLATHP-REFTFASASTGSIKQW 337
Query: 128 DIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLH--DFKFHEG 185
+ ++GH INT+ D + SGG + + WD G D G
Sbjct: 338 KCPGGEFMQNFEGHNAIINTLSVNEDNV-LFSGGDNGSMSFWDWKTGYRYQTIDTTAQPG 396
Query: 186 H------IRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPD-G 238
I + F L TG AD+T+K W + PE H +T+ P G
Sbjct: 397 SLEAEAGIMTSTFDRTGLRLITGEADKTIKVWKQDD-----QATPET---HPVTWAPTLG 448
Query: 239 R 239
R
Sbjct: 449 R 449
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 289 (106.8 bits), Expect = 3.3e-21, P = 3.3e-21
Identities = 64/225 (28%), Positives = 114/225 (50%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++G DD + +W+ L +L G + V S ++++G++ +K+WD++
Sbjct: 1008 IVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGN--IIISGSTDRTLKVWDMDSG 1065
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
V TL GH S + H G SG D L++WDI + C+H GH + +++
Sbjct: 1066 ACVHTLQGHTSTVRCMHLH--GSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQY 1123
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
DG+ +VSG +D +VK+W + LH + H + S+ F L + +GS D +++
Sbjct: 1124 --DGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLH--VVSGSLDTSIRV 1179
Query: 211 WDLETFELIGSTRPEVTGVHAITFHPDGRT--LFSG-FDDNLKVY 252
WD+ET G+ + + G ++T + R L SG D +KV+
Sbjct: 1180 WDVET----GNCKHTLMGHQSLTSGMELRQNILVSGNADSTVKVW 1220
Score = 277 (102.6 bits), Expect = 6.3e-20, P = 6.3e-20
Identities = 67/257 (26%), Positives = 124/257 (48%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A G L+ V H+ V + + +I+G D+ + +W + + +L G +S V
Sbjct: 1022 AVNGKCLRTLVGHTGGVWS---SQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTV 1078
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
+ ++V+ +G+ +++WD+E+ + L GH + V++ G+ SG D
Sbjct: 1079 RCMHLHGSKVV--SGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYD--GKLIVSGAYD 1134
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+KIW ++ C+HT +GHT + +++F DG VVSG D ++VWD+ G H
Sbjct: 1135 YMVKIWHPERQECLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTLM 1192
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET---FELIGSTRPEVTGVHAITFHPDG 238
H+ ++ + +L +G+AD TVK WD+ T + + + V + F+
Sbjct: 1193 GHQSLTSGMELR--QNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFN--S 1248
Query: 239 RTLFSGFDDNLKVYSWE 255
R + + DD V W+
Sbjct: 1249 RFVVTSSDDGT-VKLWD 1264
Score = 261 (96.9 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 63/210 (30%), Positives = 109/210 (51%)
Query: 14 HSANVNCISI-GKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVL 72
H++ V C+ + G K +++G D + +W I + + L L G + V V +D L
Sbjct: 1074 HTSTVRCMHLHGSK----VVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDGK--L 1127
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
+++GA ++K+W E + + TL GH + +++F G SG +DT++++WD+
Sbjct: 1128 IVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFD--GLHVVSGSLDTSIRVWDVETG 1185
Query: 133 GCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF---HEGHIRS 189
C HT GH + + + +VSG D+ VKVWD+T G+ L H +
Sbjct: 1186 NCKHTLMGHQSLTSGMELRQN--ILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTC 1243
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFELI 219
+ F+ F++ T S D TVK WD++T + I
Sbjct: 1244 LQFNS-RFVV-TSSDDGTVKLWDVKTGDFI 1271
Score = 245 (91.3 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 58/199 (29%), Positives = 96/199 (48%)
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
+++G+ +K+W K +RTL GH + + G SG D LK+WD+
Sbjct: 1008 IVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMS--GNIIISGSTDRTLKVWDMDSG 1065
Query: 133 GCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDF 192
C+HT +GHT + + G VVSG D ++VWD+ G LH H +R + +
Sbjct: 1066 ACVHTLQGHTSTVRCMHL--HGSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQY 1123
Query: 193 HPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKV 251
L+ +G+ D VK W E E + + + V+++ F DG + SG D +++V
Sbjct: 1124 DGK--LIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRV 1179
Query: 252 YSWEPVICHDSVDMGWSTL 270
+ E C ++ MG +L
Sbjct: 1180 WDVETGNCKHTL-MGHQSL 1197
Score = 210 (79.0 bits), Expect = 9.9e-13, P = 9.9e-13
Identities = 52/180 (28%), Positives = 87/180 (48%)
Query: 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
++G L V H A V C+ K +++G D V +W + L +L G ++ V
Sbjct: 1103 EQGSCLHVLVGHLAAVRCVQYDGK---LIVSGAYDYMVKIWHPERQECLHTLQGHTNRVY 1159
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
S+ FD V+ +G+ I++WD+E TL GH+S + +E SG D+
Sbjct: 1160 SLQFDGLHVV--SGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQ--NILVSGNADS 1215
Query: 123 NLKIWDIRKKGCIHTYKG---HTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
+K+WDI C+ T G H + ++F + R+VV+ D VK+WD+ G + +
Sbjct: 1216 TVKVWDITTGQCLQTLSGPNKHHSAVTCLQF--NSRFVVTSSDDGTVKLWDVKTGDFIRN 1273
Score = 155 (59.6 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 56/210 (26%), Positives = 89/210 (42%)
Query: 87 LEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGIN 146
L E + R G N + + ++ N + +RK + + H I
Sbjct: 942 LAEPRSDRPKRGRDGNMPPIASPWKAAYMRQHIIEMNWRSRPVRKPKVLKGHDDHV--IT 999
Query: 147 TIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADR 206
++F+ G +VSG DN +KVW GK L H G + S ++ +GS DR
Sbjct: 1000 CLQFS--GNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGN--IIISGSTDR 1055
Query: 207 TVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD-NLKVYSWEPVIC-HDSVD 264
T+K WD+++ + + + + V + H G + SG D L+V+ E C H V
Sbjct: 1056 TLKVWDMDSGACVHTLQGHTSTVRCMHLH--GSKVVSGSRDATLRVWDIEQGSCLH--VL 1111
Query: 265 MGWSTLGDLCIN-DGKLLGCSFYRNSVGIW 293
+G C+ DGKL+ Y V IW
Sbjct: 1112 VG-HLAAVRCVQYDGKLIVSGAYDYMVKIW 1140
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 300 (110.7 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 75/275 (27%), Positives = 120/275 (43%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
R L + DD V +W T L G + V SV F L+ +G++ +++W+
Sbjct: 318 RLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETT 377
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ T H+ + AV F AS N+KIWD R + +GH +N++
Sbjct: 378 TGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSV 437
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTV 208
F+PD R + S D VK+W G L + H +RS+ F L+A+ S D TV
Sbjct: 438 SFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTV 497
Query: 209 KFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD-NLKVYSWEPVICHDSVDMGW 267
K WD T L + V ++ F D R L S DD +K++ ++++
Sbjct: 498 KIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHD 557
Query: 268 STLGDLCIN-DGKLLGCSFYRNSVGIWVADVSHVE 301
+ + + D +LL + +V IW A V+
Sbjct: 558 DRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQ 592
Score = 292 (107.8 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 76/286 (26%), Positives = 124/286 (43%)
Query: 10 EFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSA 69
+F H V +S + R L + D V +W +L G + V SV F
Sbjct: 258 QFKGHDRAVGSVSFSHDS-RLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHD 316
Query: 70 EVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI 129
L+ + + G +K+WD + R L GH + +V F ASG D ++IW+
Sbjct: 317 SRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWET 376
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
HT++ H + + F D R + S VK+WD G L + + H+ + S
Sbjct: 377 TTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNS 436
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD-N 248
+ F P LLA+ S DRTVK W T L + V ++ F D R + S DD
Sbjct: 437 VSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMT 496
Query: 249 LKVYSWEPVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIW 293
+K++ V ++++ + + + + D +LL + +V IW
Sbjct: 497 VKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIW 542
Score = 251 (93.4 bits), Expect = 5.6e-16, Sum P(2) = 5.6e-16
Identities = 61/206 (29%), Positives = 92/206 (44%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H VN +S + R L + DD+ V +W + +L G + V SV F L+
Sbjct: 430 HDDCVNSVSFSPDS-RLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLI 488
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
+ + +K+WD + L H + +V F AS D +KIWD
Sbjct: 489 ASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGS 548
Query: 134 CIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIR-SIDF 192
+T +GH +N++ F+PD R + S D VK+W G + H F G + S+ F
Sbjct: 549 LENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFD-GSGRVAISLAF 607
Query: 193 HPLEFLLATGSADRTVKFWDLETFEL 218
LLA+ D TVK WD+E + L
Sbjct: 608 SHTSNLLASAMDDGTVKIWDMEIYSL 633
Score = 177 (67.4 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 50/166 (30%), Positives = 71/166 (42%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGV-IKLWDL 87
R + + DD V +W +L + V SV F S + +LA AS + +K+WD
Sbjct: 486 RLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVF-SHDSRLLASASDDMTVKIWDT 544
Query: 88 EESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINT 147
+ TL GH +V F P AS D +KIW HT+ G R +
Sbjct: 545 ATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAIS 604
Query: 148 IRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF-HEGHIRSIDF 192
+ F+ + S D VK+WD+ L H F HE I+ I F
Sbjct: 605 LAFSHTSNLLASAMDDGTVKIWDMEIYSLRHTFDLDHE--IQRIQF 648
Score = 47 (21.6 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 21/119 (17%), Positives = 45/119 (37%)
Query: 750 LNSNENRATNIPSRSRLNSRE---DQSTNTPSQTIVNGAENKATKTPTQMRLKSSENQVT 806
L + +N + + +N E D+ P+ +V +K TP K+ ++
Sbjct: 839 LRNQDNIWETMAHEAAVNGYELLLDKLVKQPNWDLVVNKRSKGKPTPLYEAAKNGHRRIV 898
Query: 807 ST--PPRARLNSSIEGQATNIPIRRRFNRNVDQTTN-VTRHRRSISNTDQATSTTAHVA 862
ST A++N + ++ +P+ D + + + + D+A H A
Sbjct: 899 STLLEKGAKVNE--KDKSERVPLHEAAANGHDDVVHFLLENGAKVDEGDKAGRVPLHEA 955
Score = 37 (18.1 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 638 LSSNIDPVANVTPQ 651
L+S +DP+ N P+
Sbjct: 1478 LTSCLDPIINTRPE 1491
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 280 (103.6 bits), Expect = 4.3e-21, P = 4.3e-21
Identities = 68/256 (26%), Positives = 116/256 (45%)
Query: 6 YKLQEFVA-HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
+KL ++ H+ V I++ K + TG D + +W + ++L G S + +
Sbjct: 197 WKLMRVISGHTGWVRAIAVDKSN-EWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGL 255
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
S + + + WDLE +K VR GH+ +V HP + SG D +
Sbjct: 256 EVSSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCV 315
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
++WD+R + I KGH I +++ V+SG D VK+WDL G H+
Sbjct: 316 RVWDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNHK 375
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG 244
+RS+ H E+ ATG+AD +K W I + + ++A+ + D L SG
Sbjct: 376 KGVRSMVIHEKEYSFATGAADN-IKQWKCPDGSFIKNLSGHNSIINAMALNADN-VLVSG 433
Query: 245 FDD-NLKVYSWEPVIC 259
D+ ++ + W+ C
Sbjct: 434 GDNGSISFWDWKTGYC 449
Score = 258 (95.9 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 64/212 (30%), Positives = 101/212 (47%)
Query: 48 PTALMS-LCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAV 106
P LM + G + V ++A D + G++ IK+WDL ++ TLTGH S +
Sbjct: 196 PWKLMRVISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGL 255
Query: 107 EF---HPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFD 163
E HP+ F+ G D + WD+ + Y GH +G+ ++ P + SGG D
Sbjct: 256 EVSSRHPY--LFSVG-EDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRD 312
Query: 164 NVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTR 223
N V+VWD+ + + K H+G I S+ + + +GS D TVK WDL T +
Sbjct: 313 NCVRVWDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLT 372
Query: 224 PEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
GV ++ H + +G DN+K W+
Sbjct: 373 NHKKGVRSMVIHEKEYSFATGAADNIK--QWK 402
Score = 183 (69.5 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 59/228 (25%), Positives = 92/228 (40%)
Query: 7 KLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAF 66
+++ + H V +++ L +GG D V +W + + + G + S+
Sbjct: 283 QVRNYYGHRQGVYSVAL-HPTLDVLFSGGRDNCVRVWDMRTRANIFEMKGHKGTILSLKS 341
Query: 67 DSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKI 126
+A+ V++G+ +KLWDL TLT HK ++ H FA+G D N+K
Sbjct: 342 QNADPQVISGSMDTTVKLWDLATGTSAATLTNHKKGVRSMVIHEKEYSFATGAAD-NIKQ 400
Query: 127 WDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFH--- 183
W I GH IN + D +VSGG + + WD G +
Sbjct: 401 WKCPDGSFIKNLSGHNSIINAMALNADNV-LVSGGDNGSISFWDWKTGYCFQKTQSIVQP 459
Query: 184 ---EGHIRSID--FHPLEFLLATGSADRTVKFWDLETFELIGSTRPEV 226
EG D F L T AD+T+KF+ E + T P V
Sbjct: 460 GSLEGEAGIFDMAFDKTGSRLITCEADKTIKFYK-EDEDATPYTHPVV 506
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 258 (95.9 bits), Expect = 7.2e-21, P = 7.2e-21
Identities = 57/195 (29%), Positives = 93/195 (47%)
Query: 43 WAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSN 102
W I +P +L G SPV V F ++++ + IK+WD E RTL GH +
Sbjct: 29 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 87
Query: 103 CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGF 162
+ F G+ AS D +K+WD + CI T GH ++++ P+G +VS
Sbjct: 88 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 147
Query: 163 DNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGST 222
D +K+W++ G + F H +R + + L+A+ S D+TV+ W + T E
Sbjct: 148 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 207
Query: 223 RPEVTGVHAITFHPD 237
R V I++ P+
Sbjct: 208 REHEHVVECISWAPE 222
Score = 215 (80.7 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 41/164 (25%), Positives = 80/164 (48%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++ +D + +W +L G + V ++FD + L+ + ++ IKLWD +
Sbjct: 58 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 117
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ +RT+ GH N ++V P G+ S D +K+W+++ C+ T+ GH + +R
Sbjct: 118 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 177
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHP 194
DG + S D V+VW + + + + HE + I + P
Sbjct: 178 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 221
Score = 195 (73.7 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 43/159 (27%), Positives = 72/159 (45%)
Query: 96 LTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR 155
L+GH+S T V FHP S D +K+WD T KGHT + I F G+
Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 98
Query: 156 WVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET 215
+ S D +K+WD + + H+ ++ S+ P + + S D+T+K W+++T
Sbjct: 99 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 158
Query: 216 FELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSW 254
+ + V + + DG TL + ++ V W
Sbjct: 159 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 196
Score = 183 (69.5 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 112 GEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDL 171
G F SG D +K+WD+ C+ T GH + + F G++++S D ++VWD
Sbjct: 243 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 302
Query: 172 TAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
+ + HE + S+DFH + TGS D+TVK W+
Sbjct: 303 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 177 (67.4 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
+L+G+ IK+WD+ + TL GH + V FH G+F S D L++WD + K
Sbjct: 246 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 305
Query: 133 GCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
C+ T H + ++ F +VV+G D VKVW+
Sbjct: 306 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 28/101 (27%), Positives = 55/101 (54%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
FL++G D+ + +W + LM+L G + V V F S +L+ A +++WD +
Sbjct: 245 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 304
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
+ ++TL H+ T+++FH + +G +D +K+W+ R
Sbjct: 305 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
Score = 151 (58.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 43/161 (26%), Positives = 68/161 (42%)
Query: 136 HTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL 195
+ GH + + F P +VS D +KVWD G K H ++ I F
Sbjct: 37 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 96
Query: 196 EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSW 254
LLA+ SAD T+K WD + FE I + V ++ P+G + S D +K++
Sbjct: 97 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 156
Query: 255 EPVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWV 294
+ C + + + N DG L+ +V +WV
Sbjct: 157 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 197
Score = 121 (47.7 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 32/143 (22%), Positives = 60/143 (41%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H+ +V IS + L + D + LW + ++ G V SVA +
Sbjct: 84 HTDSVQDISFDHSG-KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 142
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
++ + IK+W+++ V+T TGH+ V + G AS D +++W + K
Sbjct: 143 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 202
Query: 134 CIHTYKGHTRGINTIRFTPDGRW 156
C + H + I + P+ +
Sbjct: 203 CKAELREHEHVVECISWAPESSY 225
Score = 118 (46.6 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 30/114 (26%), Positives = 55/114 (48%)
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL-EFLLATG 202
G T + G +++SG D +K+WD++ G L H+ +R + FH +F+L+
Sbjct: 233 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA 292
Query: 203 SADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWE 255
D+T++ WD + + + V ++ FH + +G D +KV WE
Sbjct: 293 D-DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 343
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 258 (95.9 bits), Expect = 7.2e-21, P = 7.2e-21
Identities = 70/251 (27%), Positives = 115/251 (45%)
Query: 25 KKACRFLITGG-DDQ-KVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVI 82
K ++TG DD KV W+ K +L G V SV + + + I
Sbjct: 29 KDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHI 88
Query: 83 KLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHT 142
+LWDLE K ++++ + V F P ++ A+G + I+ + H+
Sbjct: 89 RLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRG 148
Query: 143 RGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATG 202
+ I +I ++PDG+++ SG D ++ ++D+ GKLLH + H IRS+ F P LL T
Sbjct: 149 KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTA 208
Query: 203 SADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD-NLKVYSWEPVIC-- 259
S D +K +D++ L G+ + V ++ F PD S D ++KV+ C
Sbjct: 209 SDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVN 268
Query: 260 --HDSVDMGWS 268
D D WS
Sbjct: 269 TFFDHQDQVWS 279
Score = 241 (89.9 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 56/242 (23%), Positives = 111/242 (45%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS--VAFDSAEV 71
H V ++I + + D + LW + + S+ + PVD+ VAF
Sbjct: 63 HQLGVVSVNISQNGA-IAASSSLDAHIRLWDLETGKQIKSMD--AGPVDAWTVAFSPDSK 119
Query: 72 LVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRK 131
+ G+ G + ++ +E K +L ++ + P G++ ASG +D + I+DI
Sbjct: 120 YIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT 179
Query: 132 KGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSID 191
+HT +GH I ++ F+PD + +V+ D +K++D+ L H + S+
Sbjct: 180 GKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVA 239
Query: 192 FHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN-LK 250
F P + + S+D+++K WD + + + V ++ ++P G + S DD +
Sbjct: 240 FSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIH 299
Query: 251 VY 252
+Y
Sbjct: 300 IY 301
Score = 216 (81.1 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 40/142 (28%), Positives = 77/142 (54%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
++L +G D +N++ I L +L G + P+ S+ F L++ + G IK++D++
Sbjct: 161 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 220
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ + TL+GH S +V F P F S D ++K+WD + C++T+ H + ++
Sbjct: 221 HANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSV 280
Query: 149 RFTPDGRWVVSGGFDNVVKVWD 170
++ P G +VS G D + ++D
Sbjct: 281 KYNPTGSKIVSAGDDRAIHIYD 302
Score = 213 (80.0 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 63/263 (23%), Positives = 115/263 (43%)
Query: 67 DSAEVLVLAGASTGVIKLWDLEESKMVR--TLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
D +E +V G+ ++K+W + K+ TL GH+ +V G AS +D ++
Sbjct: 30 DGSETIV-TGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHI 88
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
++WD+ I + T+ F+PD +++ +G V ++ + +GK H
Sbjct: 89 RLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRG 148
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG 244
I SI + P LA+G+ D + +D+ T +L+ + + ++TF PD + L +
Sbjct: 149 KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTA 208
Query: 245 FDDN-LKVYSWEPVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWVADVSHVEP 302
DD +K+Y + ++ S + + + D S S+ +W D S
Sbjct: 209 SDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVW--DTSSRSC 266
Query: 303 YGVGAPEPDQSICTEVKFNPPGS 325
DQ VK+NP GS
Sbjct: 267 VNTFFDHQDQ--VWSVKYNPTGS 287
>ZFIN|ZDB-GENE-050417-160 [details] [associations]
symbol:wdr38 "WD repeat domain 38" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050417-160
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
HOGENOM:HOG000091642 CTD:401551 HOVERGEN:HBG106736
OrthoDB:EOG4ZW5BD EMBL:BC093164 IPI:IPI00570124
RefSeq:NP_001017672.1 UniGene:Dr.91594 ProteinModelPortal:Q567I2
STRING:Q567I2 GeneID:550366 KEGG:dre:550366 InParanoid:Q567I2
NextBio:20879618 Uniprot:Q567I2
Length = 216
Score = 258 (95.9 bits), Expect = 7.2e-21, P = 7.2e-21
Identities = 51/153 (33%), Positives = 78/153 (50%)
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
V+ AF L+L G + LW +K++ +++GH F G FAS
Sbjct: 25 VNCCAFSPDCQLLLTCCDAGKLYLWKTSTAKLLASVSGHTGPVKCCVFSSDGRLFASASH 84
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
D +++ W C HT H R + T+ F+PDG+W++SGG+DN +W + +G LL +
Sbjct: 85 DCSVRTWCNSSLKCTHTLTAHRRSVETVSFSPDGQWLLSGGWDNRALIWSIQSGALLEEL 144
Query: 181 KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDL 213
K H ++S F +ATGS DR V+ W L
Sbjct: 145 KGHNAAVQSSVFSSDSQSVATGSWDRAVRVWKL 177
Score = 222 (83.2 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 49/164 (29%), Positives = 74/164 (45%)
Query: 8 LQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFD 67
++ F H A VNC + C+ L+T D K+ LW L S+ G + PV F
Sbjct: 15 IRYFSRHKAEVNCCAFSPD-CQLLLTCCDAGKLYLWKTSTAKLLASVSGHTGPVKCCVFS 73
Query: 68 SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIW 127
S L + + ++ W K TLT H+ + V F P G++ SG D IW
Sbjct: 74 SDGRLFASASHDCSVRTWCNSSLKCTHTLTAHRRSVETVSFSPDGQWLLSGGWDNRALIW 133
Query: 128 DIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDL 171
I+ + KGH + + F+ D + V +G +D V+VW L
Sbjct: 134 SIQSGALLEELKGHNAAVQSSVFSSDSQSVATGSWDRAVRVWKL 177
Score = 142 (55.0 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 35/161 (21%), Positives = 66/161 (40%)
Query: 93 VRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTP 152
+R + HK+ F P + + C L +W + + GHT + F+
Sbjct: 15 IRYFSRHKAEVNCCAFSPDCQLLLTCCDAGKLYLWKTSTAKLLASVSGHTGPVKCCVFSS 74
Query: 153 DGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
DGR S D V+ W ++ K H H + ++ F P L +G D W
Sbjct: 75 DGRLFASASHDCSVRTWCNSSLKCTHTLTAHRRSVETVSFSPDGQWLLSGGWDNRALIWS 134
Query: 213 LETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVY 252
+++ L+ + V + F D +++ +G +D ++V+
Sbjct: 135 IQSGALLEELKGHNAAVQSSVFSSDSQSVATGSWDRAVRVW 175
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 257 (95.5 bits), Expect = 9.1e-21, P = 9.1e-21
Identities = 73/264 (27%), Positives = 122/264 (46%)
Query: 5 GYKLQEFVAHSANVN-CISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
GY + HS V+ C+ A + ++ D+ + LW + + G ++ V S
Sbjct: 53 GYPKRSLEGHSHIVSDCVISSDGA--YALSASWDKSLRLWELSSGQTTRTFVGHTNDVLS 110
Query: 64 VAFDSAEVLVLAGASTGVIKLWD-LEESKMVRTLTGHKSNCTAVEF--HPFGEFFASGCM 120
V+F + +++G+ IKLW+ L + K T GH + V F +P S
Sbjct: 111 VSFSADNRQIVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGW 170
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
D +K+W++ + GHT INT+ +PDG SGG D V +WDL K H +
Sbjct: 171 DKLVKVWELASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESK--HLY 228
Query: 181 KFHEG-HIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVT--GVHA------ 231
H G I ++ F P + L ++ ++ +DLE + +PE G +
Sbjct: 229 SLHAGDEIHALVFSPNRYWLCAATSS-SITIFDLEKKSKVDELKPEYIEKGKKSREPECV 287
Query: 232 -ITFHPDGRTLFSGFDDNLKVYSW 254
+ + DG+TLF+G+ DN K+ +W
Sbjct: 288 SLAWSADGQTLFAGYTDN-KIRAW 310
Score = 255 (94.8 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 76/301 (25%), Positives = 132/301 (43%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLW-------AIGKPTALMSLCGLSSPVDSVAF 66
H+ V ++ + L++G D+ + +W A G P SL G S V
Sbjct: 14 HNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKR--SLEGHSHIVSDCVI 71
Query: 67 DSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKI 126
S L+ + ++LW+L + RT GH ++ +V F SG D +K+
Sbjct: 72 SSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIKL 131
Query: 127 WDIRKKGCIHTY--KGHTRGINTIRFTPDGR--WVVSGGFDNVVKVWDLTAGKLLHDFKF 182
W+ C +T KGHT ++ +RF+P+ + +VS G+D +VKVW+L + +L D
Sbjct: 132 WNTLGD-CKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTDHIG 190
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLF 242
H G+I ++ P L A+G D WDL + + S +HA+ F P+ L
Sbjct: 191 HTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHAG-DEIHALVFSPNRYWLC 249
Query: 243 SGFDDNLKVYSWEPVICHDS-----VDMGWSTLGDLCIN-----DGKLLGCSFYRNSVGI 292
+ ++ ++ E D ++ G + C++ DG+ L + N +
Sbjct: 250 AATSSSITIFDLEKKSKVDELKPEYIEKGKKSREPECVSLAWSADGQTLFAGYTDNKIRA 309
Query: 293 W 293
W
Sbjct: 310 W 310
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 293 (108.2 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 62/216 (28%), Positives = 108/216 (50%)
Query: 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
K +L+ HS V S +L++ +D V LW++ T L+ G + PV
Sbjct: 511 KTASELKILYGHSGPVYGTSFSPDR-NYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVW 569
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
F ++G V +LW + + +R GH ++ T FHP + A+G D
Sbjct: 570 DTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADR 629
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
+++WD+ C+ + GH I+++ F+P+GR++ +G D V +WD+ G ++ + K
Sbjct: 630 TVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKG 689
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWD-LETFE 217
H I ++ F +LA+GS D TV+ WD ++ FE
Sbjct: 690 HTDTIYALRFSRDGEILASGSMDNTVRLWDAVKAFE 725
Score = 276 (102.2 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 61/214 (28%), Positives = 99/214 (46%)
Query: 51 LMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHP 110
L L G S PV +F +L+ + G ++LW L+ + GH +F P
Sbjct: 516 LKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 575
Query: 111 FGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
+G +F SG D ++W + + GH + RF P+ ++ +G D V++WD
Sbjct: 576 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWD 635
Query: 171 LTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVH 230
+ G + F H+G I S+ F P LATG+ D V WD+ ++G + ++
Sbjct: 636 VLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIY 695
Query: 231 AITFHPDGRTLFSGFDDNLKVYSWEPVICHDSVD 264
A+ F DG L SG DN V W+ V + ++
Sbjct: 696 ALRFSRDGEILASGSMDNT-VRLWDAVKAFEDLE 728
Score = 251 (93.4 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 75/271 (27%), Positives = 128/271 (47%)
Query: 31 LITGG-DDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
+I GG D V +W++ P L S+ ++ + + +S +VL ++ D +
Sbjct: 464 MIVGGFADSTVRVWSV-TPKKLRSVKA-AADLSLIDKESDDVLE---------RIMDEKT 512
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
+ ++ L GH F P + S D +++W ++ C+ YKGH + +
Sbjct: 513 ASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ 572
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
F+P G + VSGG D V ++W + L F H + FHP +ATGSADRTV+
Sbjct: 573 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVR 632
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVICHDSV--DM-G 266
WD+ + +H++ F P+GR L +G D +V W+ I H + ++ G
Sbjct: 633 LWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDG-RVLLWD--IGHGLMVGELKG 689
Query: 267 WS-TLGDLCIN-DGKLLGCSFYRNSVGIWVA 295
+ T+ L + DG++L N+V +W A
Sbjct: 690 HTDTIYALRFSRDGEILASGSMDNTVRLWDA 720
Score = 37 (18.1 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 851 TDQATSTTAHVAV-KNNDDI 869
TD T+ T H+ + +N+ D+
Sbjct: 729 TDDFTTATGHINLPENSQDL 748
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 266 (98.7 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 67/260 (25%), Positives = 122/260 (46%)
Query: 6 YKLQ-EFVAHSANVNCISIGKKAC-RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
YKL H+ +++ C ++L T D+ V +W + +L G V+
Sbjct: 77 YKLMCTLEGHTKSISSAKFSP--CGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVND 134
Query: 64 VAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN 123
+A+ S V++ + +K++++ S+M +TL GH + F+P SG D +
Sbjct: 135 IAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDES 194
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
++IWD++ CI T H+ ++ + F DG + SG +D +V++WD G+ +
Sbjct: 195 VRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDD 254
Query: 184 EGH-IRSIDFHPL-EFLLATGSADRTVKFWDLETFELIGSTRPEVTG-------VHAITF 234
E + + F P +++LA+ + D T+K WD G T + TG + A
Sbjct: 255 ENPPVAFVKFSPNGKYILAS-NLDSTLKLWDFSK----GKTLKQYTGHENSKYCIFANFS 309
Query: 235 HPDGRTLFSGFDDNLKVYSW 254
G+ + SG +D K+Y W
Sbjct: 310 VTGGKWIISGSED-CKIYIW 328
Score = 256 (95.2 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 63/247 (25%), Positives = 121/247 (48%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H VN I+ + R +++ DD+ + ++ I +L G ++ V F+ LV
Sbjct: 128 HKLGVNDIAWSSDS-RCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLV 186
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
++G+ +++WD++ ++TL H +AV F+ G ASG D ++IWD
Sbjct: 187 VSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQ 246
Query: 134 CIHTY-KGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSI-- 190
CI T + ++F+P+G+++++ D+ +K+WD + GK L + HE I
Sbjct: 247 CIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFA 306
Query: 191 DFHPL--EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDD 247
+F +++++ GS D + W+L+T E++ V A HP + SG +
Sbjct: 307 NFSVTGGKWIIS-GSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEP 365
Query: 248 NLKVYSW 254
+ K++ W
Sbjct: 366 DNKIHIW 372
Score = 250 (93.1 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 50/165 (30%), Positives = 88/165 (53%)
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
K++ TL GH + ++ +F P G++ + D +KIW++ C T GH G+N I +
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAW 137
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
+ D R VVS D +K++++ ++ K H ++ +F+P L+ +GS D +V+
Sbjct: 138 SSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRI 197
Query: 211 WDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
WD++T I + V A++F+ DG + SG D L V W+
Sbjct: 198 WDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGL-VRIWD 241
Score = 157 (60.3 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 42/194 (21%), Positives = 91/194 (46%)
Query: 137 TYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLE 196
T +GHT+ I++ +F+P G+++ + D VK+W++ H+ + I +
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS 141
Query: 197 FLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWE 255
+ + S D+T+K +++ T + + + V F+P + SG FD++++++ +
Sbjct: 142 RCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVK 201
Query: 256 PVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWVADVSHVEPYGVGAPEPDQSI 314
+C ++ + + N DG L+ Y V IW D ++ + + + +
Sbjct: 202 TGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIW--DTANGQCIKTLVDDENPPV 259
Query: 315 CTEVKFNPPGSHSL 328
VKF+P G + L
Sbjct: 260 AF-VKFSPNGKYIL 272
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 266 (98.7 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 67/260 (25%), Positives = 122/260 (46%)
Query: 6 YKLQ-EFVAHSANVNCISIGKKAC-RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
YKL H+ +++ C ++L T D+ V +W + +L G V+
Sbjct: 77 YKLMCTLEGHTKSISSAKFSP--CGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVND 134
Query: 64 VAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN 123
+A+ S V++ + +K++++ S+M +TL GH + F+P SG D +
Sbjct: 135 IAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDES 194
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
++IWD++ CI T H+ ++ + F DG + SG +D +V++WD G+ +
Sbjct: 195 VRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDD 254
Query: 184 EGH-IRSIDFHPL-EFLLATGSADRTVKFWDLETFELIGSTRPEVTG-------VHAITF 234
E + + F P +++LA+ + D T+K WD G T + TG + A
Sbjct: 255 ENPPVAFVKFSPNGKYILAS-NLDSTLKLWDFSK----GKTLKQYTGHENSKYCIFANFS 309
Query: 235 HPDGRTLFSGFDDNLKVYSW 254
G+ + SG +D K+Y W
Sbjct: 310 VTGGKWIISGSED-CKIYIW 328
Score = 256 (95.2 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 63/247 (25%), Positives = 121/247 (48%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H VN I+ + R +++ DD+ + ++ I +L G ++ V F+ LV
Sbjct: 128 HKLGVNDIAWSSDS-RCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLV 186
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
++G+ +++WD++ ++TL H +AV F+ G ASG D ++IWD
Sbjct: 187 VSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQ 246
Query: 134 CIHTY-KGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSI-- 190
CI T + ++F+P+G+++++ D+ +K+WD + GK L + HE I
Sbjct: 247 CIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFA 306
Query: 191 DFHPL--EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDD 247
+F +++++ GS D + W+L+T E++ V A HP + SG +
Sbjct: 307 NFSVTGGKWIIS-GSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEP 365
Query: 248 NLKVYSW 254
+ K++ W
Sbjct: 366 DNKIHIW 372
Score = 250 (93.1 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 50/165 (30%), Positives = 88/165 (53%)
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
K++ TL GH + ++ +F P G++ + D +KIW++ C T GH G+N I +
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAW 137
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
+ D R VVS D +K++++ ++ K H ++ +F+P L+ +GS D +V+
Sbjct: 138 SSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRI 197
Query: 211 WDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
WD++T I + V A++F+ DG + SG D L V W+
Sbjct: 198 WDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGL-VRIWD 241
Score = 157 (60.3 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 42/194 (21%), Positives = 91/194 (46%)
Query: 137 TYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLE 196
T +GHT+ I++ +F+P G+++ + D VK+W++ H+ + I +
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS 141
Query: 197 FLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWE 255
+ + S D+T+K +++ T + + + V F+P + SG FD++++++ +
Sbjct: 142 RCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVK 201
Query: 256 PVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWVADVSHVEPYGVGAPEPDQSI 314
+C ++ + + N DG L+ Y V IW D ++ + + + +
Sbjct: 202 TGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIW--DTANGQCIKTLVDDENPPV 259
Query: 315 CTEVKFNPPGSHSL 328
VKF+P G + L
Sbjct: 260 AF-VKFSPNGKYIL 272
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 279 (103.3 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 64/225 (28%), Positives = 113/225 (50%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++G DD + +W+ L +L G + V S + ++++G++ +K+W+ E
Sbjct: 447 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETG 504
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ + TL GH S + H + SG D L++WDI C+H GH + +++
Sbjct: 505 ECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 562
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
DGR VVSG +D +VKVWD LH + H + S+ F + + +GS D +++
Sbjct: 563 --DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRV 618
Query: 211 WDLETFELIGSTRPEVTGVHAITFHPD--GRTLFSG-FDDNLKVY 252
WD+ET G+ +TG ++T + L SG D +K++
Sbjct: 619 WDVET----GNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIW 659
Score = 275 (101.9 bits), Expect = 4.2e-20, P = 4.2e-20
Identities = 67/221 (30%), Positives = 112/221 (50%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A+ G + H++ V C+ + +K +++G D + +W I L L G + V
Sbjct: 501 AETGECIHTLYGHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAAV 557
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
V +D V+ +GA ++K+WD E + TL GH + +++F G SG +D
Sbjct: 558 RCVQYDGRRVV--SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLD 613
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
T++++WD+ CIHT GH + + + D +VSG D+ VK+WD+ G+ L +
Sbjct: 614 TSIRVWDVETGNCIHTLTGH-QSLTSGMELKDNI-LVSGNADSTVKIWDIKTGQCLQTLQ 671
Query: 182 F---HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELI 219
H+ + + F+ F++ T S D TVK WDL T E I
Sbjct: 672 GPHKHQSAVTCLQFNK-NFVI-TSSDDGTVKLWDLRTGEFI 710
Score = 268 (99.4 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 61/214 (28%), Positives = 107/214 (50%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A G L+ V H+ V + +I+G D+ + +W + +L G +S V
Sbjct: 461 AVTGKCLRTLVGHTGGVWSSQMRDN---IIISGSTDRTLKVWNAETGECIHTLYGHTSTV 517
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
+ E V++G+ +++WD+E + + L GH + V++ G SG D
Sbjct: 518 RCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYD 573
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+K+WD + C+HT +GHT + +++F DG VVSG D ++VWD+ G +H
Sbjct: 574 FMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT 631
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET 215
H+ ++ + +L +G+AD TVK WD++T
Sbjct: 632 GHQSLTSGMELK--DNILVSGNADSTVKIWDIKT 663
Score = 217 (81.4 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 53/178 (29%), Positives = 90/178 (50%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G L + H A V C+ R +++G D V +W T L +L G ++ V S+
Sbjct: 544 GQCLHVLMGHVAAVRCVQYDG---RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 600
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
FD + V++G+ I++WD+E + TLTGH+S + +E SG D+ +
Sbjct: 601 QFDG--IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTV 656
Query: 125 KIWDIRKKGCIHTYKG---HTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
KIWDI+ C+ T +G H + ++F + +V++ D VK+WDL G+ + +
Sbjct: 657 KIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLRTGEFIRN 712
Score = 211 (79.3 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 52/174 (29%), Positives = 84/174 (48%)
Query: 85 WDLEESKMVRTLTGHKSNC-TAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTR 143
W + K + L GH + T ++F G SG D LK+W C+ T GHT
Sbjct: 418 WRRGDLKSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 475
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGS 203
G+ + + + ++SG D +KVW+ G+ +H H +R + H E + +GS
Sbjct: 476 GVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGS 531
Query: 204 ADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEP 256
D T++ WD+ET + + V V + + DGR + SG +D +KV W+P
Sbjct: 532 RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKV--WDP 581
Score = 160 (61.4 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 51/176 (28%), Positives = 79/176 (44%)
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
+DTN + D++ + + H I ++F G +VSG DN +KVW GK L
Sbjct: 414 IDTNWRRGDLKSPKVLKGHDDHV--ITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRT 469
Query: 180 FKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGR 239
H G + S + ++ +GS DRT+K W+ ET E I + + V + H + R
Sbjct: 470 LVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH-EKR 526
Query: 240 TLFSGFDDNLKVYSWEPVIC-HDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIW 293
+ D L+V+ E C H V MG C+ DG+ + Y V +W
Sbjct: 527 VVSGSRDATLRVWDIETGQCLH--VLMG-HVAAVRCVQYDGRRVVSGAYDFMVKVW 579
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 276 (102.2 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 53/203 (26%), Positives = 101/203 (49%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L++ +D + W +G T + G + PV V + +G+ +LW + +
Sbjct: 357 LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRT 416
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+R GH ++ V+FHP + A+G D +++W ++ + + GH + ++ F
Sbjct: 417 YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAF 476
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
+P+G+++ S G D +K+WDL +G L + + H +I S+ F P L+A+ S D +V+
Sbjct: 477 SPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRV 536
Query: 211 WDLETFELIGST---RPEVTGVH 230
WD+ T E+ GV+
Sbjct: 537 WDIRNTHCSAPTDGSSSELVGVY 559
Score = 242 (90.2 bits), Expect = 9.5e-17, P = 9.5e-17
Identities = 58/223 (26%), Positives = 97/223 (43%)
Query: 49 TALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEF 108
T + L G PV S F + +L+ + I+ WDL GH V+
Sbjct: 333 TEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDI 392
Query: 109 HPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKV 168
P+ +FASG D ++W + + Y GH ++ ++F P+ ++ +G D V++
Sbjct: 393 SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 169 WDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTG 228
W G + F H G + S+ F P LA+ D+ +K WDL + L R
Sbjct: 453 WSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDN 512
Query: 229 VHAITFHPDGRTLFSG-FDDNLKVYSWEPVICHDSVDMGWSTL 270
+ ++TF PD + S D++++V+ C D S L
Sbjct: 513 ITSLTFSPDSSLIASASMDNSVRVWDIRNTHCSAPTDGSSSEL 555
Score = 228 (85.3 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 49/184 (26%), Positives = 84/184 (45%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
+ +G D+ LW+ + L G + VD V F + G++ ++LW ++
Sbjct: 398 YFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ 457
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
VR TGH+ ++ F P G++ AS D LK+WD+ +GHT I ++
Sbjct: 458 GNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLT 517
Query: 150 FTPDGRWVVSGGFDNVVKVWDL-----------TAGKLLHDFKFHEGHIRSIDFHPLEFL 198
F+PD + S DN V+VWD+ ++ +L+ + ++ S+ F L
Sbjct: 518 FSPDSSLIASASMDNSVRVWDIRNTHCSAPTDGSSSELVGVYTGQMSNVLSVQFMACNLL 577
Query: 199 LATG 202
L TG
Sbjct: 578 LVTG 581
Score = 207 (77.9 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 44/132 (33%), Positives = 68/132 (51%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
R Y L+ + H A+V+C+ + +L TG D+ V LW+ + ++ G PV S
Sbjct: 415 RTYPLRIYAGHLADVDCVKFHPNS-NYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLS 473
Query: 64 VAFD-SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
+AF + + L AG +KLWDL + + L GH N T++ F P AS MD
Sbjct: 474 LAFSPNGKYLASAGEDQR-LKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDN 532
Query: 123 NLKIWDIRKKGC 134
++++WDIR C
Sbjct: 533 SVRVWDIRNTHC 544
Score = 127 (49.8 bits), Expect = 0.00028, P = 0.00028
Identities = 47/215 (21%), Positives = 90/215 (41%)
Query: 48 PTALMSLCGLSSPVDSVAFDSAEV-----LVLAGASTGVIKLWDLEESKMVRTLTGHKSN 102
P +L ++C + ++AE+ L+ AG IKLW L K+ H+ +
Sbjct: 253 PPSLTTICFYAFYNTEQLLNTAEISPESKLLAAGFDNSCIKLWSLRSKKLKPE--PHRVD 310
Query: 103 CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGF 162
+ + H + + + D+ + + +GH + + RF D ++S
Sbjct: 311 VSRI--HLACDILEEEDDEDD----DVGTE--MKVLRGHCGPVYSTRFLADSSGLLSCSE 362
Query: 163 DNVVKVWDLTAGKLLHDFKFHEGH---IRSIDFHPLEFLLATGSADRTVKFWDLETFELI 219
D ++ WDL G + ++GH + +D P A+GS DRT + W + +
Sbjct: 363 DMSIRYWDL--GSFTNTV-LYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPL 419
Query: 220 GSTRPEVTGVHAITFHPDGRTLFSGFDDN-LKVYS 253
+ V + FHP+ L +G D ++++S
Sbjct: 420 RIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWS 454
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 279 (103.3 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 64/225 (28%), Positives = 113/225 (50%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++G DD + +W+ L +L G + V S + ++++G++ +K+W+ E
Sbjct: 394 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETG 451
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ + TL GH S + H + SG D L++WDI C+H GH + +++
Sbjct: 452 ECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 509
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
DGR VVSG +D +VKVWD LH + H + S+ F + + +GS D +++
Sbjct: 510 --DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRV 565
Query: 211 WDLETFELIGSTRPEVTGVHAITFHPD--GRTLFSG-FDDNLKVY 252
WD+ET G+ +TG ++T + L SG D +K++
Sbjct: 566 WDVET----GNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIW 606
Score = 276 (102.2 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 67/221 (30%), Positives = 113/221 (51%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A+ G + H++ V C+ + +K +++G D + +W I L L G + V
Sbjct: 448 AETGECIHTLYGHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAAV 504
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
V +D V+ +GA ++K+WD E + TL GH + +++F G SG +D
Sbjct: 505 RCVQYDGRRVV--SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLD 560
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
T++++WD+ CIHT GH + + + D +VSG D+ VK+WD+ G+ L +
Sbjct: 561 TSIRVWDVETGNCIHTLTGH-QSLTSGMELKDNI-LVSGNADSTVKIWDIKTGQCLQTLQ 618
Query: 182 F---HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELI 219
H+ + + F+ F++ T S D TVK WDL+T E I
Sbjct: 619 GPNKHQSAVTCLQFNK-NFVI-TSSDDGTVKLWDLKTGEFI 657
Score = 268 (99.4 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 61/214 (28%), Positives = 107/214 (50%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A G L+ V H+ V + +I+G D+ + +W + +L G +S V
Sbjct: 408 AVTGKCLRTLVGHTGGVWSSQMRDN---IIISGSTDRTLKVWNAETGECIHTLYGHTSTV 464
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
+ E V++G+ +++WD+E + + L GH + V++ G SG D
Sbjct: 465 RCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYD 520
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+K+WD + C+HT +GHT + +++F DG VVSG D ++VWD+ G +H
Sbjct: 521 FMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT 578
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET 215
H+ ++ + +L +G+AD TVK WD++T
Sbjct: 579 GHQSLTSGMELK--DNILVSGNADSTVKIWDIKT 610
Score = 217 (81.4 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 53/178 (29%), Positives = 90/178 (50%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G L + H A V C+ R +++G D V +W T L +L G ++ V S+
Sbjct: 491 GQCLHVLMGHVAAVRCVQYDG---RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 547
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
FD + V++G+ I++WD+E + TLTGH+S + +E SG D+ +
Sbjct: 548 QFDG--IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTV 603
Query: 125 KIWDIRKKGCIHTYKG---HTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
KIWDI+ C+ T +G H + ++F + +V++ D VK+WDL G+ + +
Sbjct: 604 KIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRN 659
Score = 214 (80.4 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 53/174 (30%), Positives = 84/174 (48%)
Query: 85 WDLEESKMVRTLTGHKSNC-TAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTR 143
W E K + L GH + T ++F G SG D LK+W C+ T GHT
Sbjct: 365 WRRGELKSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 422
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGS 203
G+ + + + ++SG D +KVW+ G+ +H H +R + H E + +GS
Sbjct: 423 GVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGS 478
Query: 204 ADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEP 256
D T++ WD+ET + + V V + + DGR + SG +D +KV W+P
Sbjct: 479 RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKV--WDP 528
Score = 156 (60.0 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 50/176 (28%), Positives = 79/176 (44%)
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
+DTN + +++ + + H I ++F G +VSG DN +KVW GK L
Sbjct: 361 IDTNWRRGELKSPKVLKGHDDHV--ITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRT 416
Query: 180 FKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGR 239
H G + S + ++ +GS DRT+K W+ ET E I + + V + H + R
Sbjct: 417 LVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH-EKR 473
Query: 240 TLFSGFDDNLKVYSWEPVIC-HDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIW 293
+ D L+V+ E C H V MG C+ DG+ + Y V +W
Sbjct: 474 VVSGSRDATLRVWDIETGQCLH--VLMG-HVAAVRCVQYDGRRVVSGAYDFMVKVW 526
Score = 48 (22.0 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 7 KLQEFVAHSANVNCISIGKKACR 29
K++ + H + V S+GKK C+
Sbjct: 167 KMKRKLDHGSEVRSFSLGKKPCK 189
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 279 (103.3 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 64/225 (28%), Positives = 113/225 (50%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++G DD + +W+ L +L G + V S + ++++G++ +K+W+ E
Sbjct: 399 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETG 456
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ + TL GH S + H + SG D L++WDI C+H GH + +++
Sbjct: 457 ECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 514
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
DGR VVSG +D +VKVWD LH + H + S+ F + + +GS D +++
Sbjct: 515 --DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRV 570
Query: 211 WDLETFELIGSTRPEVTGVHAITFHPD--GRTLFSG-FDDNLKVY 252
WD+ET G+ +TG ++T + L SG D +K++
Sbjct: 571 WDVET----GNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIW 611
Score = 276 (102.2 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 67/221 (30%), Positives = 113/221 (51%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A+ G + H++ V C+ + +K +++G D + +W I L L G + V
Sbjct: 453 AETGECIHTLYGHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAAV 509
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
V +D V+ +GA ++K+WD E + TL GH + +++F G SG +D
Sbjct: 510 RCVQYDGRRVV--SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLD 565
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
T++++WD+ CIHT GH + + + D +VSG D+ VK+WD+ G+ L +
Sbjct: 566 TSIRVWDVETGNCIHTLTGH-QSLTSGMELKDNI-LVSGNADSTVKIWDIKTGQCLQTLQ 623
Query: 182 F---HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELI 219
H+ + + F+ F++ T S D TVK WDL+T E I
Sbjct: 624 GPNKHQSAVTCLQFNK-NFVI-TSSDDGTVKLWDLKTGEFI 662
Score = 268 (99.4 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 61/214 (28%), Positives = 107/214 (50%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A G L+ V H+ V + +I+G D+ + +W + +L G +S V
Sbjct: 413 AVTGKCLRTLVGHTGGVWSSQMRDN---IIISGSTDRTLKVWNAETGECIHTLYGHTSTV 469
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
+ E V++G+ +++WD+E + + L GH + V++ G SG D
Sbjct: 470 RCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYD 525
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+K+WD + C+HT +GHT + +++F DG VVSG D ++VWD+ G +H
Sbjct: 526 FMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT 583
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET 215
H+ ++ + +L +G+AD TVK WD++T
Sbjct: 584 GHQSLTSGMELK--DNILVSGNADSTVKIWDIKT 615
Score = 217 (81.4 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 53/178 (29%), Positives = 90/178 (50%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G L + H A V C+ R +++G D V +W T L +L G ++ V S+
Sbjct: 496 GQCLHVLMGHVAAVRCVQYDG---RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 552
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
FD + V++G+ I++WD+E + TLTGH+S + +E SG D+ +
Sbjct: 553 QFDG--IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTV 608
Query: 125 KIWDIRKKGCIHTYKG---HTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
KIWDI+ C+ T +G H + ++F + +V++ D VK+WDL G+ + +
Sbjct: 609 KIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRN 664
Score = 214 (80.4 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 53/174 (30%), Positives = 84/174 (48%)
Query: 85 WDLEESKMVRTLTGHKSNC-TAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTR 143
W E K + L GH + T ++F G SG D LK+W C+ T GHT
Sbjct: 370 WRRGELKSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 427
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGS 203
G+ + + + ++SG D +KVW+ G+ +H H +R + H E + +GS
Sbjct: 428 GVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGS 483
Query: 204 ADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEP 256
D T++ WD+ET + + V V + + DGR + SG +D +KV W+P
Sbjct: 484 RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKV--WDP 533
Score = 156 (60.0 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 50/176 (28%), Positives = 79/176 (44%)
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
+DTN + +++ + + H I ++F G +VSG DN +KVW GK L
Sbjct: 366 IDTNWRRGELKSPKVLKGHDDHV--ITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRT 421
Query: 180 FKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGR 239
H G + S + ++ +GS DRT+K W+ ET E I + + V + H + R
Sbjct: 422 LVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH-EKR 478
Query: 240 TLFSGFDDNLKVYSWEPVIC-HDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIW 293
+ D L+V+ E C H V MG C+ DG+ + Y V +W
Sbjct: 479 VVSGSRDATLRVWDIETGQCLH--VLMG-HVAAVRCVQYDGRRVVSGAYDFMVKVW 531
Score = 48 (22.0 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 7 KLQEFVAHSANVNCISIGKKACR 29
K++ + H + V S+GKK C+
Sbjct: 172 KMKRKLDHGSEVRSFSLGKKPCK 194
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 253 (94.1 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 78/254 (30%), Positives = 122/254 (48%)
Query: 25 KKACRFLITGG-DDQ-KVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGAST--G 80
K+ ++TG DD KV W K SL G V SV D + L +A +S+
Sbjct: 29 KENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSV--DISHTLPIAASSSLDA 86
Query: 81 VIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKG 140
I+LWDLE K ++++ + + F P ++ A+G + I+ + + G Y
Sbjct: 87 HIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGV-ESGK-KEYSL 144
Query: 141 HTRG--INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFL 198
TRG I +I ++PDG+++ SG D ++ ++D+ GKLLH + H IRS+ F P L
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 199 LATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD-NLKVYSWEPV 257
L T S D +K +D++ L G+ + V + F PD S D ++KV+
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 258 IC-H---DSVDMGW 267
C H D D W
Sbjct: 265 TCVHTFFDHQDQVW 278
Score = 223 (83.6 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 52/219 (23%), Positives = 103/219 (47%)
Query: 37 DQKVNLWAIGKPTALMSLCGLSSPVDS--VAFDSAEVLVLAGASTGVIKLWDLEESKMVR 94
D + LW + + S+ + PVD+ +AF + G G + ++ +E K
Sbjct: 85 DAHIRLWDLENGKQIKSID--AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEY 142
Query: 95 TLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDG 154
+L ++ + P G++ ASG +D + I+DI +HT +GH I ++ F+PD
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS 202
Query: 155 RWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLE 214
+ +V+ D +K++D+ L H + ++ F P + + S+D++VK WD+
Sbjct: 203 QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG 262
Query: 215 TFELIGSTRPEVTGVHAITFHPDGRTLFS-GFDDNLKVY 252
T + + V + ++ +G + S G D + +Y
Sbjct: 263 TRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301
Score = 203 (76.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 40/142 (28%), Positives = 76/142 (53%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
++L +G D +N++ I L +L G + P+ S+ F L++ + G IK++D++
Sbjct: 161 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 220
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ + TL+GH S V F P F S D ++K+WD+ + C+HT+ H + +
Sbjct: 221 HANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGV 280
Query: 149 RFTPDGRWVVSGGFDNVVKVWD 170
++ +G +VS G D + ++D
Sbjct: 281 KYNGNGSKIVSVGDDQEIHIYD 302
>UNIPROTKB|H3BT67 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000569627 Bgee:H3BT67 Uniprot:H3BT67
Length = 117
Score = 253 (94.1 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 51/109 (46%), Positives = 76/109 (69%)
Query: 1 MAKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSP 60
+ K +KLQE VAH++NV+ + +GK + R L TGGDD +VNLW+I KP +MSL G +SP
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSN--CTAVE 107
V+SV ++ E L++AG+ +G I++WDLE +K TL GH+ C ++
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAK---TL-GHQEERLCLPIQ 110
Score = 128 (50.1 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 28/94 (29%), Positives = 44/94 (46%)
Query: 85 WDLEESKMVRTLTGHKSNCTAVEF-HPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTR 143
W L+E + H SN +++ G A+G D + +W I K CI + GHT
Sbjct: 11 WKLQE------IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLL 177
+ ++R +V+G ++VWDL A K L
Sbjct: 65 PVESVRLNTPEELIVAGSQSGSIRVWDLEAAKTL 98
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 275 (101.9 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 59/207 (28%), Positives = 95/207 (45%)
Query: 6 YKLQEFV-AHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
YKL + HS VNC+ + + TG +D+ + +W + ++L G + + +
Sbjct: 276 YKLYRVILGHSGWVNCVDVDISN-EWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDI 334
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
+ + +K WDLE +K++R GH S + HP + SG D +
Sbjct: 335 KISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVV 394
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
++WDIR K + GHT + +I VVSG D ++++WDL GK H+
Sbjct: 395 RVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHK 454
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFW 211
IRS+ HP E+ + D VK W
Sbjct: 455 KSIRSLSIHPFEYSFCSCGTDN-VKVW 480
Score = 237 (88.5 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 56/199 (28%), Positives = 93/199 (46%)
Query: 54 LCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGE 113
+ G S V+ V D + G++ +IK+WDL K+ TLTGH ++ ++
Sbjct: 282 ILGHSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNP 341
Query: 114 FFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTA 173
+ S D +K WD+ I Y GH G+ + P ++SGG D VV+VWD+
Sbjct: 342 YLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRT 401
Query: 174 GKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAIT 233
+ H G + SI +E + +GS D+ ++ WDL + S + +++
Sbjct: 402 KSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLS 461
Query: 234 FHPDGRTLFSGFDDNLKVY 252
HP + S DN+KV+
Sbjct: 462 IHPFEYSFCSCGTDNVKVW 480
Score = 210 (79.0 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 60/210 (28%), Positives = 95/210 (45%)
Query: 91 KMVRTLTGHKS--NCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
K+ R + GH NC V+ E+FA+G D +KIWD+ T GH I I
Sbjct: 277 KLYRVILGHSGWVNCVDVDIS--NEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDI 334
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTV 208
+ + ++ S G DN VK WDL K++ D+ H + + HP LL +G D V
Sbjct: 335 KISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVV 394
Query: 209 KFWDLET----FELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNL-KVYSWEPVICHDSV 263
+ WD+ T F L G T V + + + P + SG D + +++ C S+
Sbjct: 395 RVWDIRTKSSVFVLSGHTGT-VMSICSQSVEPQ---VVSGSQDKMIRLWDLNNGKCRISL 450
Query: 264 DMGWSTLGDLCINDGKLLGCSFYRNSVGIW 293
++ L I+ + CS ++V +W
Sbjct: 451 THHKKSIRSLSIHPFEYSFCSCGTDNVKVW 480
Score = 182 (69.1 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 57/217 (26%), Positives = 98/217 (45%)
Query: 8 LQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFD 67
++++ H + V C+S+ + L++GG D V +W I +++ L G + V S+
Sbjct: 363 IRDYHGHLSGVYCLSL-HPSLDLLMSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQ 421
Query: 68 SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIW 127
S E V++G+ +I+LWDL K +LT HK + ++ HPF F S C N+K+W
Sbjct: 422 SVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSIHPFEYSFCS-CGTDNVKVW 480
Query: 128 DIRKKGCIHTYKGHTRGINT--IRFTP---DGRWVVSGGFDNVVKVWDLTAG-------- 174
G IN I+ P D ++ G + + +D ++G
Sbjct: 481 CGADAEFDRNITGFNSIINCSLIKQDPYFNDSSILILGSNNGQLHFYDWSSGYKYDTLSN 540
Query: 175 KLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFW 211
K++ E S+ F E L T D+++K W
Sbjct: 541 KVVPGTVECENSTLSMAFDKSESRLITTHGDKSIKIW 577
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 275 (101.9 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 59/207 (28%), Positives = 95/207 (45%)
Query: 6 YKLQEFV-AHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
YKL + HS VNC+ + + TG +D+ + +W + ++L G + + +
Sbjct: 276 YKLYRVILGHSGWVNCVDVDISN-EWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDI 334
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
+ + +K WDLE +K++R GH S + HP + SG D +
Sbjct: 335 KISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVV 394
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
++WDIR K + GHT + +I VVSG D ++++WDL GK H+
Sbjct: 395 RVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHK 454
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFW 211
IRS+ HP E+ + D VK W
Sbjct: 455 KSIRSLSIHPFEYSFCSCGTDN-VKVW 480
Score = 237 (88.5 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 56/199 (28%), Positives = 93/199 (46%)
Query: 54 LCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGE 113
+ G S V+ V D + G++ +IK+WDL K+ TLTGH ++ ++
Sbjct: 282 ILGHSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNP 341
Query: 114 FFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTA 173
+ S D +K WD+ I Y GH G+ + P ++SGG D VV+VWD+
Sbjct: 342 YLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRT 401
Query: 174 GKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAIT 233
+ H G + SI +E + +GS D+ ++ WDL + S + +++
Sbjct: 402 KSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLS 461
Query: 234 FHPDGRTLFSGFDDNLKVY 252
HP + S DN+KV+
Sbjct: 462 IHPFEYSFCSCGTDNVKVW 480
Score = 210 (79.0 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 60/210 (28%), Positives = 95/210 (45%)
Query: 91 KMVRTLTGHKS--NCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
K+ R + GH NC V+ E+FA+G D +KIWD+ T GH I I
Sbjct: 277 KLYRVILGHSGWVNCVDVDIS--NEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDI 334
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTV 208
+ + ++ S G DN VK WDL K++ D+ H + + HP LL +G D V
Sbjct: 335 KISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVV 394
Query: 209 KFWDLET----FELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNL-KVYSWEPVICHDSV 263
+ WD+ T F L G T V + + + P + SG D + +++ C S+
Sbjct: 395 RVWDIRTKSSVFVLSGHTGT-VMSICSQSVEPQ---VVSGSQDKMIRLWDLNNGKCRISL 450
Query: 264 DMGWSTLGDLCINDGKLLGCSFYRNSVGIW 293
++ L I+ + CS ++V +W
Sbjct: 451 THHKKSIRSLSIHPFEYSFCSCGTDNVKVW 480
Score = 182 (69.1 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 57/217 (26%), Positives = 98/217 (45%)
Query: 8 LQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFD 67
++++ H + V C+S+ + L++GG D V +W I +++ L G + V S+
Sbjct: 363 IRDYHGHLSGVYCLSL-HPSLDLLMSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQ 421
Query: 68 SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIW 127
S E V++G+ +I+LWDL K +LT HK + ++ HPF F S C N+K+W
Sbjct: 422 SVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSIHPFEYSFCS-CGTDNVKVW 480
Query: 128 DIRKKGCIHTYKGHTRGINT--IRFTP---DGRWVVSGGFDNVVKVWDLTAG-------- 174
G IN I+ P D ++ G + + +D ++G
Sbjct: 481 CGADAEFDRNITGFNSIINCSLIKQDPYFNDSSILILGSNNGQLHFYDWSSGYKYDTLSN 540
Query: 175 KLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFW 211
K++ E S+ F E L T D+++K W
Sbjct: 541 KVVPGTVECENSTLSMAFDKSESRLITTHGDKSIKIW 577
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 275 (101.9 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 49/185 (26%), Positives = 91/185 (49%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
++L++ +D LW++ TAL++ G + PV VAF + +LW +
Sbjct: 392 KYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCD 451
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+R GH S+ V FHP + +G D ++WD+ + + + GHT+ + +
Sbjct: 452 HIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAV 511
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTV 208
PDG + S + ++ +WD+ G+ + + H G+I S+ F +L +G +D TV
Sbjct: 512 AIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTV 571
Query: 209 KFWDL 213
+ WD+
Sbjct: 572 RAWDV 576
Score = 212 (79.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 54/252 (21%), Positives = 105/252 (41%)
Query: 17 NVNCISIGKKACRFLITGGDDQKVNLWAIG-------KPTAL------MSLCGLSSPVDS 63
N+NC + + G + + LW+I K T++ + L S PV
Sbjct: 326 NMNCAEFSPDST-MIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYG 384
Query: 64 VAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN 123
F +L+ + +LW ++ + GH V F PFG +FA+ D
Sbjct: 385 TTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQT 444
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
++W + + GH ++ + F P+ +V++G D ++WD+ G + F H
Sbjct: 445 AQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGH 504
Query: 184 EGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS 243
+ ++ P +A+ ++ + WD+ T I + R +++++F + L S
Sbjct: 505 TQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVS 564
Query: 244 GFDDNLKVYSWE 255
G D V +W+
Sbjct: 565 GGSD-CTVRAWD 575
Score = 170 (64.9 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 33/126 (26%), Positives = 64/126 (50%)
Query: 6 YKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVA 65
Y L+ F H ++V+C++ + +++TG D+ LW + + ++ G + PV +VA
Sbjct: 454 YPLRVFAGHLSDVDCVTFHPNSA-YVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVA 512
Query: 66 FDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLK 125
+ + S G+I LWD+ + ++T+ GH+ N ++ F SG D ++
Sbjct: 513 IAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVR 572
Query: 126 IWDIRK 131
WD+ K
Sbjct: 573 AWDVFK 578
Score = 146 (56.5 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 39/164 (23%), Positives = 70/164 (42%)
Query: 97 TGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR--KKGC-----IHTYKG------HTR 143
T + NC EF P A G ++ +++W I+ KK + G H+
Sbjct: 323 TNNNMNCA--EFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSG 380
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGS 203
+ F+PD ++++S D ++W + L +K H G + + F P AT S
Sbjct: 381 PVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATAS 440
Query: 204 ADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD 247
D+T + W + + ++ V +TFHP+ + +G D
Sbjct: 441 HDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSD 484
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 278 (102.9 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 58/172 (33%), Positives = 89/172 (51%)
Query: 67 DSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKI 126
+S ++ +G+ ++LWD + +TL GH +V F P G ASG D +++
Sbjct: 704 NSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRL 763
Query: 127 WDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGH 186
WD T +GH+ + ++ F+PDGR + SG FD V++WD G L + H
Sbjct: 764 WDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDT 823
Query: 187 IRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDG 238
+RS+ F P LLA+GS D+TV+ WD T L + + T V + F DG
Sbjct: 824 VRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGT-VTELQFSQDG 874
Score = 269 (99.8 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 60/165 (36%), Positives = 89/165 (53%)
Query: 93 VRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTP 152
++TL GH ++ AV ASG D +++WD T +GH+ + ++ F+P
Sbjct: 696 LQTLEGHSNSVWAV--------LASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSP 747
Query: 153 DGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
DGR + SG FD V++WD G L + H +RS+ F P LLA+GS D+TV+ WD
Sbjct: 748 DGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWD 807
Query: 213 LETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEP 256
T L + R V ++ F PDGR L SG FD +++ W+P
Sbjct: 808 PATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRL--WDP 850
Score = 247 (92.0 bits), Expect = 6.6e-17, P = 6.6e-17
Identities = 58/174 (33%), Positives = 86/174 (49%)
Query: 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
K G +LQ HS +V + L +G DD+ V LW + +L G S V
Sbjct: 691 KWGAELQTLEGHSNSVWAV---------LASGSDDETVRLWDPATGSLQQTLEGHSGWVL 741
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
SVAF L+ +G+ ++LWD + +TL GH + +V F P G ASG D
Sbjct: 742 SVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDK 801
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKL 176
+++WD T +GH+ + ++ F+PDGR + SG FD V++WD G L
Sbjct: 802 TVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTL 855
Score = 199 (75.1 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 62/210 (29%), Positives = 100/210 (47%)
Query: 145 INTIRFTPDGRWVV--SGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATG 202
+ T+ + W V SG D V++WD G L + H G + S+ F P LLA+G
Sbjct: 696 LQTLEGHSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASG 755
Query: 203 SADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEPVICHD 261
S D+TV+ WD T L + R V ++ F PDGR L SG FD +++ W+P
Sbjct: 756 SFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRL--WDPATGSL 813
Query: 262 SVDM-GWS-TLGDLCIN-DGKLLGCSFYRNSVGIWVADVSHVEPYGVGAPEPDQSICTEV 318
+ G S T+ + + DG+LL + +V +W ++ + + TE+
Sbjct: 814 QQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLI-----IKGTVTEL 868
Query: 319 KFNPPGSHSLEKVGIIG-RSTSGFR-STSP 346
+F+ GS+ +G + +S G S+SP
Sbjct: 869 QFSQDGSYISTNLGSLNIQSRCGNNLSSSP 898
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 251 (93.4 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 71/262 (27%), Positives = 123/262 (46%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G ++ H+ V+ + I +F ++G D+ + LW + + + + V SV
Sbjct: 59 GRPVRSLTGHNHFVSDVVISSDG-QFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSV 117
Query: 65 AFDSAEVLVLAGASTGVIKLWD-LEESKMVRTLTGHKSNCTAVEFHPFGE--FFASGCMD 121
AF + +++G+ IKLW+ L + K T H + V F P S D
Sbjct: 118 AFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWD 177
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+K+W++ + GHT +NT+ +PDG SGG D +WDL GK L+
Sbjct: 178 KVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLP 237
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEV--TGVH--------A 231
++ I ++ F P + L + ++K WDLE + I +PE+ +G +
Sbjct: 238 GNDV-INAMSFSPNRYWLCA-AVGSSIKIWDLEDKKEIEELKPEIASSGSSRGSSPQCIS 295
Query: 232 ITFHPDGRTLFSGFDDNL-KVY 252
+ + DG+TLF+G+ DN+ +VY
Sbjct: 296 LAWSQDGQTLFAGYTDNIIRVY 317
Score = 238 (88.8 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 62/215 (28%), Positives = 104/215 (48%)
Query: 45 IGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCT 104
IG+P + SL G + V V S L+G+ ++LWDL + R H +
Sbjct: 58 IGRP--VRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVL 115
Query: 105 AVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKG--HTRGINTIRFTPDGR--WVVSG 160
+V F SG D ++K+W+ + C +T HT ++T+RF+P R +VS
Sbjct: 116 SVAFSADNRQIVSGSRDKSIKLWNTLAQ-CKYTITDDCHTDWVSTVRFSPSNRDPVIVSA 174
Query: 161 GFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIG 220
G+D VVKVW+L +L + H G++ ++ P L A+G D WDL + +
Sbjct: 175 GWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHL- 233
Query: 221 STRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
T P ++A++F P+ L + ++K++ E
Sbjct: 234 YTLPGNDVINAMSFSPNRYWLCAAVGSSIKIWDLE 268
Score = 191 (72.3 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 59/243 (24%), Positives = 105/243 (43%)
Query: 73 VLAGASTGVIKLWDLEE---------SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN 123
VL+ + I +WD++ + VR+LTGH + V G+F SG D
Sbjct: 33 VLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSGSWDKT 92
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAG-KLLHDFKF 182
L++WD+ + + HT+ + ++ F+ D R +VSG D +K+W+ A K
Sbjct: 93 LRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDC 152
Query: 183 HEGHIRSIDFHPL--EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
H + ++ F P + ++ + D+ VK W+L L + V+ +T PDG
Sbjct: 153 HTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSL 212
Query: 241 LFSGFDDNLKVYSWE-PVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIW-VADVS 298
SG D + W+ H G + + + + C+ +S+ IW + D
Sbjct: 213 CASGGKDG-QAMLWDLNEGKHLYTLPGNDVINAMSFSPNRYWLCAAVGSSIKIWDLEDKK 271
Query: 299 HVE 301
+E
Sbjct: 272 EIE 274
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 42/181 (23%), Positives = 80/181 (44%)
Query: 88 EESKMVRTLTGHKSNCTAVEFHPFGE--FFASGCMDTNLKIWDIRK-----KGCI----H 136
E+ K+ TL GH T + + + S D + +WD+ +G I
Sbjct: 4 EQMKLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVR 63
Query: 137 TYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLE 196
+ GH ++ + + DG++ +SG +D +++WDL G F H + S+ F
Sbjct: 64 SLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADN 123
Query: 197 FLLATGSADRTVKFWD-LETFELIGSTRPEVTGVHAITFHPDGRT---LFSGFDDNLKVY 252
+ +GS D+++K W+ L + + V + F P R + +G+D +KV+
Sbjct: 124 RQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVW 183
Query: 253 S 253
+
Sbjct: 184 N 184
Score = 144 (55.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 39/152 (25%), Positives = 75/152 (49%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++ G D+ V +W +G + G + V++V L +G G LWDL E
Sbjct: 171 IVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEG 230
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYK------GHTRG 144
K + TL G+ A+ F P ++ + +++KIWD+ K I K G +RG
Sbjct: 231 KHLYTLPGNDV-INAMSFSP-NRYWLCAAVGSSIKIWDLEDKKEIEELKPEIASSGSSRG 288
Query: 145 IN----TIRFTPDGRWVVSGGFDNVVKVWDLT 172
+ ++ ++ DG+ + +G DN+++V+ ++
Sbjct: 289 SSPQCISLAWSQDGQTLFAGYTDNIIRVYQVS 320
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 251 (93.4 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 71/262 (27%), Positives = 123/262 (46%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G ++ H+ V+ + I +F ++G D+ + LW + + + + V SV
Sbjct: 59 GRPVRSLTGHNHFVSDVVISSDG-QFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSV 117
Query: 65 AFDSAEVLVLAGASTGVIKLWD-LEESKMVRTLTGHKSNCTAVEFHPFGE--FFASGCMD 121
AF + +++G+ IKLW+ L + K T H + V F P S D
Sbjct: 118 AFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWD 177
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+K+W++ + GHT +NT+ +PDG SGG D +WDL GK L+
Sbjct: 178 KVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLP 237
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEV--TGVH--------A 231
++ I ++ F P + L + ++K WDLE + I +PE+ +G +
Sbjct: 238 GNDV-INAMSFSPNRYWLCA-AVGSSIKIWDLEDKKEIEELKPEIASSGSSRGSSPQCIS 295
Query: 232 ITFHPDGRTLFSGFDDNL-KVY 252
+ + DG+TLF+G+ DN+ +VY
Sbjct: 296 LAWSQDGQTLFAGYTDNIIRVY 317
Score = 238 (88.8 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 62/215 (28%), Positives = 104/215 (48%)
Query: 45 IGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCT 104
IG+P + SL G + V V S L+G+ ++LWDL + R H +
Sbjct: 58 IGRP--VRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVL 115
Query: 105 AVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKG--HTRGINTIRFTPDGR--WVVSG 160
+V F SG D ++K+W+ + C +T HT ++T+RF+P R +VS
Sbjct: 116 SVAFSADNRQIVSGSRDKSIKLWNTLAQ-CKYTITDDCHTDWVSTVRFSPSNRDPVIVSA 174
Query: 161 GFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIG 220
G+D VVKVW+L +L + H G++ ++ P L A+G D WDL + +
Sbjct: 175 GWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHL- 233
Query: 221 STRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
T P ++A++F P+ L + ++K++ E
Sbjct: 234 YTLPGNDVINAMSFSPNRYWLCAAVGSSIKIWDLE 268
Score = 191 (72.3 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 59/243 (24%), Positives = 105/243 (43%)
Query: 73 VLAGASTGVIKLWDLEE---------SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN 123
VL+ + I +WD++ + VR+LTGH + V G+F SG D
Sbjct: 33 VLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSGSWDKT 92
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAG-KLLHDFKF 182
L++WD+ + + HT+ + ++ F+ D R +VSG D +K+W+ A K
Sbjct: 93 LRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDC 152
Query: 183 HEGHIRSIDFHPL--EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
H + ++ F P + ++ + D+ VK W+L L + V+ +T PDG
Sbjct: 153 HTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSL 212
Query: 241 LFSGFDDNLKVYSWE-PVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIW-VADVS 298
SG D + W+ H G + + + + C+ +S+ IW + D
Sbjct: 213 CASGGKDG-QAMLWDLNEGKHLYTLPGNDVINAMSFSPNRYWLCAAVGSSIKIWDLEDKK 271
Query: 299 HVE 301
+E
Sbjct: 272 EIE 274
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 42/181 (23%), Positives = 80/181 (44%)
Query: 88 EESKMVRTLTGHKSNCTAVEFHPFGE--FFASGCMDTNLKIWDIRK-----KGCI----H 136
E+ K+ TL GH T + + + S D + +WD+ +G I
Sbjct: 4 EQMKLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVR 63
Query: 137 TYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLE 196
+ GH ++ + + DG++ +SG +D +++WDL G F H + S+ F
Sbjct: 64 SLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADN 123
Query: 197 FLLATGSADRTVKFWD-LETFELIGSTRPEVTGVHAITFHPDGRT---LFSGFDDNLKVY 252
+ +GS D+++K W+ L + + V + F P R + +G+D +KV+
Sbjct: 124 RQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVW 183
Query: 253 S 253
+
Sbjct: 184 N 184
Score = 144 (55.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 39/152 (25%), Positives = 75/152 (49%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++ G D+ V +W +G + G + V++V L +G G LWDL E
Sbjct: 171 IVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEG 230
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYK------GHTRG 144
K + TL G+ A+ F P ++ + +++KIWD+ K I K G +RG
Sbjct: 231 KHLYTLPGNDV-INAMSFSP-NRYWLCAAVGSSIKIWDLEDKKEIEELKPEIASSGSSRG 288
Query: 145 IN----TIRFTPDGRWVVSGGFDNVVKVWDLT 172
+ ++ ++ DG+ + +G DN+++V+ ++
Sbjct: 289 SSPQCISLAWSQDGQTLFAGYTDNIIRVYQVS 320
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 251 (93.4 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 81/277 (29%), Positives = 131/277 (47%)
Query: 5 GYKLQEFVAHSANVNCISIG---KKACRFLITGG-DDQ-KVNLWAIGKPTALMSLCGLSS 59
G ++ AH + ++ G K+ ++TG DD KV W + SL G
Sbjct: 6 GILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQL 65
Query: 60 PVDSVAFDSAEVLVLAGAST--GVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFAS 117
V SV D + L +A +S+ I+LWDLE K ++++ + + F P ++ A+
Sbjct: 66 GVVSV--DISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLAT 123
Query: 118 GCMDTNLKIWDIRKKGCIHTYKGHTRG--INTIRFTPDGRWVVSGGFDNVVKVWDLTAGK 175
G + I+ + + G Y TRG I +I ++PDG+++ SG D ++ ++D+ GK
Sbjct: 124 GTHVGKVNIFGV-ESGK-KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK 181
Query: 176 LLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFH 235
LLH + H IRS+ F P LL T S D +K +D++ L G+ + V + F
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 241
Query: 236 PDGRTLFSGFDD-NLKVYSWEPVIC-H---DSVDMGW 267
PD S D ++KV+ C H D D W
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVW 278
Score = 212 (79.7 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 49/209 (23%), Positives = 98/209 (46%)
Query: 37 DQKVNLWAIGKPTALMSLCGLSSPVDS--VAFDSAEVLVLAGASTGVIKLWDLEESKMVR 94
D + LW + + S+ + PVD+ +AF + G G + ++ +E K
Sbjct: 85 DAHIRLWDLENGKQIKSID--AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEY 142
Query: 95 TLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDG 154
+L ++ + P G++ ASG +D + I+DI +HT +GH I ++ F+PD
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS 202
Query: 155 RWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLE 214
+ +V+ D +K++D+ L H + ++ F P + + S+D++VK WD+
Sbjct: 203 QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG 262
Query: 215 TFELIGSTRPEVTGVHAITFHPDGRTLFS 243
T + + V + ++ +G + S
Sbjct: 263 TRTCVHTFFDHQDQVWGVKYNGNGSKIVS 291
Score = 193 (73.0 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 43/165 (26%), Positives = 76/165 (46%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
++L TG KVN++ + SL + S+A+ + +GA G+I ++D+
Sbjct: 119 QYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA 178
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
K++ TL GH ++ F P + + D +KI+D++ T GH + +
Sbjct: 179 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNV 238
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFH 193
F PD VS D VKVWD+ +H F H+ + + ++
Sbjct: 239 AFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYN 283
Score = 189 (71.6 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 38/133 (28%), Positives = 71/133 (53%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
++L +G D +N++ I L +L G + P+ S+ F L++ + G IK++D++
Sbjct: 161 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 220
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ + TL+GH S V F P F S D ++K+WD+ + C+HT+ H + +
Sbjct: 221 HANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGV 280
Query: 149 RFTPDGRWVVSGG 161
++ +G +VS G
Sbjct: 281 KYNGNGSKIVSVG 293
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 251 (93.4 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 81/277 (29%), Positives = 131/277 (47%)
Query: 5 GYKLQEFVAHSANVNCISIG---KKACRFLITGG-DDQ-KVNLWAIGKPTALMSLCGLSS 59
G ++ AH + ++ G K+ ++TG DD KV W + SL G
Sbjct: 6 GILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQL 65
Query: 60 PVDSVAFDSAEVLVLAGAST--GVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFAS 117
V SV D + L +A +S+ I+LWDLE K ++++ + + F P ++ A+
Sbjct: 66 GVVSV--DISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLAT 123
Query: 118 GCMDTNLKIWDIRKKGCIHTYKGHTRG--INTIRFTPDGRWVVSGGFDNVVKVWDLTAGK 175
G + I+ + + G Y TRG I +I ++PDG+++ SG D ++ ++D+ GK
Sbjct: 124 GTHVGKVNIFGV-ESGK-KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK 181
Query: 176 LLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFH 235
LLH + H IRS+ F P LL T S D +K +D++ L G+ + V + F
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 241
Query: 236 PDGRTLFSGFDD-NLKVYSWEPVIC-H---DSVDMGW 267
PD S D ++KV+ C H D D W
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVW 278
Score = 223 (83.6 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 52/219 (23%), Positives = 103/219 (47%)
Query: 37 DQKVNLWAIGKPTALMSLCGLSSPVDS--VAFDSAEVLVLAGASTGVIKLWDLEESKMVR 94
D + LW + + S+ + PVD+ +AF + G G + ++ +E K
Sbjct: 85 DAHIRLWDLENGKQIKSID--AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEY 142
Query: 95 TLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDG 154
+L ++ + P G++ ASG +D + I+DI +HT +GH I ++ F+PD
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS 202
Query: 155 RWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLE 214
+ +V+ D +K++D+ L H + ++ F P + + S+D++VK WD+
Sbjct: 203 QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG 262
Query: 215 TFELIGSTRPEVTGVHAITFHPDGRTLFS-GFDDNLKVY 252
T + + V + ++ +G + S G D + +Y
Sbjct: 263 TRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301
Score = 203 (76.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 40/142 (28%), Positives = 76/142 (53%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
++L +G D +N++ I L +L G + P+ S+ F L++ + G IK++D++
Sbjct: 161 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 220
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ + TL+GH S V F P F S D ++K+WD+ + C+HT+ H + +
Sbjct: 221 HANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGV 280
Query: 149 RFTPDGRWVVSGGFDNVVKVWD 170
++ +G +VS G D + ++D
Sbjct: 281 KYNGNGSKIVSVGDDQEIHIYD 302
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 271 (100.5 bits), Expect = 6.5e-20, P = 6.5e-20
Identities = 49/185 (26%), Positives = 95/185 (51%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L++ +D + W +G T + G + PV V + +G+ +LW + +
Sbjct: 357 LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRT 416
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+R GH ++ V+FHP + A+G D +++W ++ + + GH + ++ F
Sbjct: 417 YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSF 476
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
+P+G+++ S G D +K+WDL +G L + + H I S+ F P L+A+ S D +V+
Sbjct: 477 SPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRV 536
Query: 211 WDLET 215
WD+ +
Sbjct: 537 WDIRS 541
Score = 246 (91.7 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 56/217 (25%), Positives = 95/217 (43%)
Query: 49 TALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEF 108
T + L G PV S F + +L+ + I+ WDL GH V+
Sbjct: 333 TEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDI 392
Query: 109 HPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKV 168
PF +FASG D ++W + + Y GH ++ ++F P+ ++ +G D V++
Sbjct: 393 SPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 169 WDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTG 228
W G + F H G + S+ F P LA+ D+ +K WDL + L R
Sbjct: 453 WSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDS 512
Query: 229 VHAITFHPDGRTLFSG-FDDNLKVYSWEPVICHDSVD 264
+ ++ F PD + S D++++V+ C+ D
Sbjct: 513 ITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPAD 549
Score = 234 (87.4 bits), Expect = 7.1e-16, P = 7.1e-16
Identities = 50/184 (27%), Positives = 85/184 (46%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
+ +G D+ LW+ + L G + VD V F + G++ ++LW ++
Sbjct: 398 YFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ 457
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
VR TGH+ ++ F P G++ AS D LK+WD+ +GHT I ++
Sbjct: 458 GNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLA 517
Query: 150 FTPDGRWVVSGGFDNVVKVWDL-----------TAGKLLHDFKFHEGHIRSIDFHPLEFL 198
F+PD + S DN V+VWD+ ++G+L+ + ++ S+ F L
Sbjct: 518 FSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQFMACNLL 577
Query: 199 LATG 202
L TG
Sbjct: 578 LVTG 581
Score = 196 (74.1 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 42/132 (31%), Positives = 68/132 (51%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
R Y L+ + H A+V+C+ + +L TG D+ V LW+ + ++ G PV S
Sbjct: 415 RTYPLRIYAGHLADVDCVKFHPNS-NYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLS 473
Query: 64 VAFD-SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
++F + + L AG +KLWDL + + L GH + T++ F P AS MD
Sbjct: 474 LSFSPNGKYLASAGEDQR-LKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDN 532
Query: 123 NLKIWDIRKKGC 134
++++WDIR C
Sbjct: 533 SVRVWDIRSTCC 544
Score = 126 (49.4 bits), Expect = 0.00036, P = 0.00036
Identities = 53/221 (23%), Positives = 91/221 (41%)
Query: 48 PTALMSLCGLSSPVDSVAFDSAEV-----LVLAGASTGVIKLWDLEESKMVRTLTGHKSN 102
P +L ++C + ++AE+ L+ AG IKLW L SK +++ H
Sbjct: 253 PPSLTTICFYAFYNTEQLLNTAEISSDSKLLAAGFDNSCIKLWSLR-SKKLKSEPHHVDT 311
Query: 103 ------CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRW 156
C +E E +G T +KI +GH + + RF D
Sbjct: 312 SRIRLACDTLEEEE-NEEDNTG---TEMKI-----------LRGHCGPVYSTRFLADSSG 356
Query: 157 VVSGGFDNVVKVWDLTAGKLLHDFKFHEGH---IRSIDFHPLEFLLATGSADRTVKFWDL 213
++S D ++ WDL G + ++GH + +D P A+GS DRT + W
Sbjct: 357 LLSCSEDMSIRYWDL--GSFTNTV-LYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSF 413
Query: 214 ETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN-LKVYS 253
+ + + V + FHP+ L +G D ++++S
Sbjct: 414 DRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWS 454
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 265 (98.3 bits), Expect = 6.6e-20, Sum P(2) = 6.6e-20
Identities = 64/250 (25%), Positives = 112/250 (44%)
Query: 13 AHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVL 72
AH + V I I ++++G D + W + S + ++F ++
Sbjct: 165 AHDSAVRSI-IWSHNEDWMVSGDDSGNIKYWQPNMNNVKIFKAHEQSKIRGLSFSPTDLK 223
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
+ + A +IK+WD L GH + V +HP SG D N+KIWD +
Sbjct: 224 LASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSS 283
Query: 133 GCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDF 192
I T GH ++ + + +G W+VS D ++KV+D+ K + FK H + ++
Sbjct: 284 QNITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALAL 343
Query: 193 HPL-EFLLATGSADRTVKFWDLETFELIGSTRP--EVTGVH-----AITFHPDGRTLFSG 244
HP E L +G D + +W ++G+ P E+ H ++++HP G L SG
Sbjct: 344 HPYHEDLFVSGDKDGKILYW------IVGNPEPQAEIHSAHDADVWSLSWHPIGHILASG 397
Query: 245 FDDNLKVYSW 254
+D+ + W
Sbjct: 398 SNDHTTKF-W 406
Score = 169 (64.5 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 42/195 (21%), Positives = 86/195 (44%)
Query: 60 PVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGC 119
P++ V++ ++ G+S+G LW+ L H S ++ + ++ SG
Sbjct: 127 PINCVSWTPEGRRLVTGSSSGEFTLWNGLTFNFETILQAHDSAVRSIIWSHNEDWMVSGD 186
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRG-INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLH 178
N+K W + +K H + I + F+P + S D ++K+WD +
Sbjct: 187 DSGNIKYWQPNMNN-VKIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCTEDN 245
Query: 179 DFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDG 238
H ++ + +HP + L+ +G D +K WD ++ + I + + V + ++ +G
Sbjct: 246 QLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNG 305
Query: 239 RTLFSGFDDNL-KVY 252
+ S D L KV+
Sbjct: 306 NWIVSASSDQLLKVF 320
Score = 57 (25.1 bits), Expect = 6.6e-20, Sum P(2) = 6.6e-20
Identities = 32/161 (19%), Positives = 49/161 (30%)
Query: 619 QTRLNGNEYQAATAPQQTRLSSNIDPVANVTPQTLPSGNEDQAANVTPQTRPSSNEDQTA 678
Q+ L + Q PQ + I + PQ +P Q P +P Q
Sbjct: 509 QSMLPNQQQQQPNQPQPIQQPQPIQQPQQI-PQNIPPQIPQQQQQ--PIQQPMQQPQQQQ 565
Query: 679 NVIRQTRPSSNEDQAVIVNPQTRRHSNEDQASNIAPYTRHDRNEDRATNITPQSKISRNQ 738
I Q P + PQ ++ + Q P PQ + Q
Sbjct: 566 --IPQNIPQQMQQ------PQQQQQQQQQQQQQQQPLQPQQFQPKPPYQQRPQQFSQQQQ 617
Query: 739 DQATNITSHMGLNSNENRATNIPSRSRLNSREDQSTNTPSQ 779
Q N N N+ + + + N + Q N P+Q
Sbjct: 618 QQQFNPNQQQQFNPNQQQFNPNQQQQQFNPNQQQQFN-PNQ 657
Score = 52 (23.4 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 39/189 (20%), Positives = 68/189 (35%)
Query: 651 QTLPSGNEDQAANVTPQTRPSSNEDQTANVIRQTRPSSNE-DQAVIVNPQTRRHSNEDQA 709
Q L + Q PQ + + Q +Q+ P + Q+++ N Q ++ +
Sbjct: 467 QNLNYSMQQQQPQQQPQQQQQQQQQQQLQPQQQSSPPPIDLMQSMLPNQQQQQPNQPQPI 526
Query: 710 SNIAPYTRHDRNEDRATNITPQSKISRNQDQATNITSHMGLNSNENRATNIPSRSRL-NS 768
P + + NI PQ I + Q Q I M + NIP + +
Sbjct: 527 QQPQPI---QQPQQIPQNIPPQ--IPQQQQQP--IQQPMQQPQQQQIPQNIPQQMQQPQQ 579
Query: 769 REDQSTNTPSQTIVNGAENKATKTPTQMRLKSSENQVTSTPPRARLNSSIEGQATNIPIR 828
++ Q Q + K P Q R Q + + + N + + Q N P +
Sbjct: 580 QQQQQQQQQQQQQPLQPQQFQPKPPYQQR----PQQFSQQQQQQQFNPN-QQQQFN-PNQ 633
Query: 829 RRFNRNVDQ 837
++FN N Q
Sbjct: 634 QQFNPNQQQ 642
Score = 40 (19.1 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 10/41 (24%), Positives = 16/41 (39%)
Query: 653 LPSGNEDQAANVTPQTRPSSNEDQTANVIRQTRPSSNEDQA 693
L SG+ D + RP+ N ++ NE+ A
Sbjct: 394 LASGSNDHTTKFWSRNRPADTMKDKYNNPNASKDIENEEDA 434
Score = 38 (18.4 bits), Expect = 6.3e-18, Sum P(2) = 6.3e-18
Identities = 10/40 (25%), Positives = 15/40 (37%)
Query: 602 PQTTLSSNEDHVANVTSQTRLNGNEYQAATAPQQTRLSSN 641
PQ + N Q + N N+ Q QQ + + N
Sbjct: 609 PQQFSQQQQQQQFNPNQQQQFNPNQQQFNPNQQQQQFNPN 648
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 271 (100.5 bits), Expect = 7.9e-20, P = 7.9e-20
Identities = 71/245 (28%), Positives = 107/245 (43%)
Query: 2 AKRGYKLQE-FVAHSANVNCISIGKKACR-FLITGGDDQKVNLWA-IGKP--TALMSLCG 56
AK YKL F H V+CI + CR +LI+ +D+ LW +G P L++ G
Sbjct: 346 AKFDYKLNNIFRLHELPVSCIVM--HPCRDYLISCSEDR---LWKMVGLPQGNVLLTGSG 400
Query: 57 LSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFA 116
+ + F + + + IKLWDL + + TL GH + +H G+F A
Sbjct: 401 HTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVA 460
Query: 117 SGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKL 176
S +D KIWD+ + C +T GHT +N+I F P +++ D + VWD GK
Sbjct: 461 SASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKC 520
Query: 177 LHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHP 236
H + F P ++A+ A K WD I S + + + F
Sbjct: 521 EQSLYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEVNFDQ 580
Query: 237 DGRTL 241
GR L
Sbjct: 581 SGRVL 585
Score = 231 (86.4 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 60/219 (27%), Positives = 94/219 (42%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L T D + LW + K ++L G + V S + S V + + K+WD+
Sbjct: 417 LATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSE 476
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ TL GH + ++EF PF + D L +WD R C + GH +N F
Sbjct: 477 RCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATF 536
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHI--RSIDFHPLEFLLATGSADRTV 208
TP G + S V K+WD KL+ G ++F +LA SA+ +
Sbjct: 537 TPRGHIIASCDARGVTKLWDFR--KLIPIVSIDVGPSSGNEVNFDQSGRVLAQASANGII 594
Query: 209 KFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD 247
DL++ ++ E + VH++ F G L+SG D
Sbjct: 595 HLLDLKSGQIHKLVGHE-SEVHSVVFSHLGENLYSGGSD 632
Score = 231 (86.4 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 57/224 (25%), Positives = 106/224 (47%)
Query: 60 PVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGC 119
PV + +++ + + K+ L + ++ T +GH + FHP G A+
Sbjct: 362 PVSCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLATSS 421
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
D+ +K+WD+ K C T +GH + + + G +V S D K+WD+ + + +
Sbjct: 422 GDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYT 481
Query: 180 FKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGR 239
H + SI+F P +L T SAD+T+ WD T + S + V+ TF P G
Sbjct: 482 LYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPRGH 541
Query: 240 TLFSGFDDNL-KVYSWEPVICHDSVDMGWSTLGDLCIND-GKLL 281
+ S + K++ + +I S+D+G S+ ++ + G++L
Sbjct: 542 IIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEVNFDQSGRVL 585
Score = 183 (69.5 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 47/184 (25%), Positives = 83/184 (45%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
F+ + D +W + +L G + V+S+ F ++L ++ + +WD
Sbjct: 458 FVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDART 517
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL-KIWDIRKKGCIHTYK-GHTRGINT 147
K ++L GH + F P G AS C + K+WD RK I + G + G N
Sbjct: 518 GKCEQSLYGHMHSVNDATFTPRGHIIAS-CDARGVTKLWDFRKLIPIVSIDVGPSSG-NE 575
Query: 148 IRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRT 207
+ F GR + + ++ + DL +G++ H HE + S+ F L L +G +D T
Sbjct: 576 VNFDQSGRVLAQASANGIIHLLDLKSGQI-HKLVGHESEVHSVVFSHLGENLYSGGSDGT 634
Query: 208 VKFW 211
++ W
Sbjct: 635 IRLW 638
Score = 147 (56.8 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 51/229 (22%), Positives = 92/229 (40%)
Query: 99 HKSNCTAVEFHPFGEFFASGCMDTNL-KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWV 157
H+ + + HP ++ S C + L K+ + + + T GHT ++ F P G +
Sbjct: 359 HELPVSCIVMHPCRDYLIS-CSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKL 417
Query: 158 VSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFE 217
+ D+ +K+WDL G+ + H + S +H +A+ S D T K WD+ +
Sbjct: 418 ATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSER 477
Query: 218 LIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSWEPVICHDSVDMGWSTLGDLCIN 276
+ V++I F P L + D L V+ C S+ ++ D
Sbjct: 478 CRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFT 537
Query: 277 D-GKLLGCSFYRNSVGIWVADVSHVEPYGVGAPEPDQSICTEVKFNPPG 324
G ++ R +W D + P + + + S EV F+ G
Sbjct: 538 PRGHIIASCDARGVTKLW--DFRKLIP--IVSIDVGPSSGNEVNFDQSG 582
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 248 (92.4 bits), Expect = 8.4e-20, P = 8.4e-20
Identities = 74/267 (27%), Positives = 117/267 (43%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G + HS V+ + I +F ++G D + LW + G + V SV
Sbjct: 53 GIPQRSLKGHSHFVSDVVISSDG-QFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSV 111
Query: 65 AFDSAEVLVLAGASTGVIKLWD-LEESKMVRTLTGHKSNCTAVEFHPFGE--FFASGCMD 121
AF + +++G+ IKLW+ L K GH + V F P S D
Sbjct: 112 AFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWD 171
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+K+W++ + GHT +NT+ +PDG SGG D +WDL GK H +
Sbjct: 172 KMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYT 229
Query: 182 FHEGH-IRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHA--------- 231
G I ++ F P + L + ++K WDLE ++ R EV ++
Sbjct: 230 LDSGDVINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVDELRQEVISTNSKAEPPQCTS 288
Query: 232 ITFHPDGRTLFSGFDDNLKVYSWEPVI 258
+ + DG+TLF+G+ DNL + W+ I
Sbjct: 289 LAWSADGQTLFAGYTDNL-IRVWQVTI 314
Score = 243 (90.6 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 72/260 (27%), Positives = 117/260 (45%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTA-----LMSLCGLSSPVDSVAFDS 68
HS V I+ K +++ D+ + +W + + SL G S V V S
Sbjct: 14 HSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVVISS 73
Query: 69 AEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWD 128
L+GA G ++LWDL R GH + +V F SG D +K+W+
Sbjct: 74 DGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWN 133
Query: 129 IRKKGCIHTYK--GHTRGINTIRFTPDGR--WVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
C +T + GHT ++ +RF+P+ +VS G+D +VKVW+L KL + H
Sbjct: 134 TLGV-CKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHT 192
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDL-ETFELIGSTRPEVTGVHAITFHPDGRTLFS 243
G++ ++ P L A+G D WDL E L +V ++A+ F P+ L +
Sbjct: 193 GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSGDV--INALCFSPNRYWLCA 250
Query: 244 GFDDNLKVYSWEPVICHDSV 263
++K++ E I D +
Sbjct: 251 ATGPSIKIWDLEGKIIVDEL 270
Score = 193 (73.0 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 68/272 (25%), Positives = 119/272 (43%)
Query: 72 LVLAGASTGVIKLWDL--EESKM---VRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKI 126
++L+ + I +W L +E+ R+L GH + V G+F SG D L++
Sbjct: 30 MILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVVISSDGQFALSGAWDGTLRL 89
Query: 127 WDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGH 186
WD+ + GHT+ + ++ F+ D R +VSG D +K+W+ T G + + EGH
Sbjct: 90 WDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWN-TLGVCKYTIQ-DEGH 147
Query: 187 ---IRSIDFHPLEF--LLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTL 241
+ + F P ++ + D+ VK W+L +L + ++ +T PDG
Sbjct: 148 TEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLC 207
Query: 242 FSGFDDNLKVYSWE-PVICH-DSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIW------ 293
SG D + W+ H ++D G + LC + + C+ S+ IW
Sbjct: 208 ASGGKDG-QAMLWDLNEGKHLYTLDSG-DVINALCFSPNRYWLCAATGPSIKIWDLEGKI 265
Query: 294 VADVSHVEPYGVGAP-EPDQSICTEVKFNPPG 324
+ D E + EP Q CT + ++ G
Sbjct: 266 IVDELRQEVISTNSKAEPPQ--CTSLAWSADG 295
Score = 138 (53.6 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 42/180 (23%), Positives = 81/180 (45%)
Query: 6 YKLQEFVAHSANVNCISIGKKACR-FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
Y +Q+ H+ V+C+ + +++ G D+ V +W + + G + +++V
Sbjct: 140 YTIQD-EGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTV 198
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTL-TGHKSNCTAVEFHPFGEFFASGCMDTN 123
L +G G LWDL E K + TL +G N A+ F P ++ +
Sbjct: 199 TVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSGDVIN--ALCFSP-NRYWLCAATGPS 255
Query: 124 LKIWDIRKKGCIHTYKGHTRGINT---------IRFTPDGRWVVSGGFDNVVKVWDLTAG 174
+KIWD+ K + + N+ + ++ DG+ + +G DN+++VW +T G
Sbjct: 256 IKIWDLEGKIIVDELRQEVISTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIRVWQVTIG 315
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 248 (92.4 bits), Expect = 8.4e-20, P = 8.4e-20
Identities = 75/254 (29%), Positives = 122/254 (48%)
Query: 25 KKACRFLITGGDDQKVNLWA-IGKPTALM-SLCGLSSPVDSVAFDSAEVLVLAGAST--G 80
K+ ++TG D V +W + L SL G V SV D + L +A +S+
Sbjct: 29 KENSETVVTGSLDDLVKVWKWCDERLDLQWSLEGHQLGVVSV--DISHTLPIAASSSLDA 86
Query: 81 VIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKG 140
I+LWDL+ K ++++ + + F P ++ A+G + I+ + + G Y
Sbjct: 87 HIRLWDLDNGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGV-ESGK-KEYSL 144
Query: 141 HTRG--INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFL 198
TRG I +I ++PDG+++ SG D ++ ++D+ GKLLH + H IRS+ F P L
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 199 LATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD-NLKVYSWEPV 257
L T S D +K +D++ L G+ + V + F PD S D ++KV+
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 258 IC-H---DSVDMGW 267
C H D D W
Sbjct: 265 TCVHTFFDHQDQVW 278
Score = 225 (84.3 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 53/219 (24%), Positives = 103/219 (47%)
Query: 37 DQKVNLWAIGKPTALMSLCGLSSPVDS--VAFDSAEVLVLAGASTGVIKLWDLEESKMVR 94
D + LW + + S+ + PVD+ +AF + G G + ++ +E K
Sbjct: 85 DAHIRLWDLDNGKQIKSID--AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEY 142
Query: 95 TLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDG 154
+L ++ + P G++ ASG +D + I+DI +HT +GH I ++ F+PD
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS 202
Query: 155 RWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLE 214
+ +V+ D +K++D+ L H + ++ F P + + S+D++VK WD+
Sbjct: 203 QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG 262
Query: 215 TFELIGSTRPEVTGVHAITFHPDGRTLFS-GFDDNLKVY 252
T + + V + ++ +G + S G D + VY
Sbjct: 263 TRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Score = 204 (76.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 41/142 (28%), Positives = 76/142 (53%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
++L +G D +N++ I L +L G + P+ S+ F L++ + G IK++D++
Sbjct: 161 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 220
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ + TL+GH S V F P F S D ++K+WD+ + C+HT+ H + +
Sbjct: 221 HANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGV 280
Query: 149 RFTPDGRWVVSGGFDNVVKVWD 170
++ +G +VS G D + V+D
Sbjct: 281 KYNGNGSKIVSVGDDQEIHVYD 302
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 248 (92.4 bits), Expect = 8.4e-20, P = 8.4e-20
Identities = 70/252 (27%), Positives = 118/252 (46%)
Query: 25 KKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGAST--GVI 82
K+ ++TG D V +W + + V+ D + L +A +S+ I
Sbjct: 29 KENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHI 88
Query: 83 KLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHT 142
+LWDLE K ++++ + + F P ++ A+G + I+ + + G Y T
Sbjct: 89 RLWDLENGKQMKSIDAGPVDAWTLAFSPDSQYLATGTHMGKVNIFGV-ESGK-KEYSLDT 146
Query: 143 RG--INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLA 200
RG I +I ++PDG+++ SG D ++ ++D+ GKLLH + H IRS+ F P LL
Sbjct: 147 RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLV 206
Query: 201 TGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD-NLKVYSWEPVIC 259
T S D +K +D++ L G+ + V + F PD S D ++KV+ C
Sbjct: 207 TASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 266
Query: 260 -H---DSVDMGW 267
H D D W
Sbjct: 267 IHTFFDHQDQVW 278
Score = 224 (83.9 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 54/219 (24%), Positives = 103/219 (47%)
Query: 37 DQKVNLWAIGKPTALMSLCGLSSPVDS--VAFDSAEVLVLAGASTGVIKLWDLEESKMVR 94
D + LW + + S+ + PVD+ +AF + G G + ++ +E K
Sbjct: 85 DAHIRLWDLENGKQMKSID--AGPVDAWTLAFSPDSQYLATGTHMGKVNIFGVESGKKEY 142
Query: 95 TLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDG 154
+L ++ + P G++ ASG +D + I+DI +HT +GH I ++ F+PD
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS 202
Query: 155 RWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLE 214
+ +V+ D +K++D+ L H + ++ F P + + S+D++VK WD+
Sbjct: 203 QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG 262
Query: 215 TFELIGSTRPEVTGVHAITFHPDGRTLFS-GFDDNLKVY 252
T I + V + ++ +G + S G D + VY
Sbjct: 263 TRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Score = 205 (77.2 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 42/142 (29%), Positives = 76/142 (53%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
++L +G D +N++ I L +L G + P+ S+ F L++ + G IK++D++
Sbjct: 161 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 220
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ + TL+GH S V F P F S D ++K+WD+ + CIHT+ H + +
Sbjct: 221 HANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGV 280
Query: 149 RFTPDGRWVVSGGFDNVVKVWD 170
++ +G +VS G D + V+D
Sbjct: 281 KYNGNGSKIVSVGDDQEIHVYD 302
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 268 (99.4 bits), Expect = 8.7e-20, Sum P(2) = 8.7e-20
Identities = 55/191 (28%), Positives = 92/191 (48%)
Query: 44 AIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNC 103
A+ +P L G + ++SV F + L+++ + IK+WD E + RTL GH +
Sbjct: 92 ALPRPPEKHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAV 151
Query: 104 TAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFD 163
++F G AS D +K+WD + C+ T GH ++ +RFTP G ++S D
Sbjct: 152 QDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRD 211
Query: 164 NVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTR 223
+KVW+ G + HE +R I +A+ S D+T+K W++ E + + R
Sbjct: 212 KTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYR 271
Query: 224 PEVTGVHAITF 234
V + F
Sbjct: 272 EHSHVVECLAF 282
Score = 221 (82.9 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 50/187 (26%), Positives = 84/187 (44%)
Query: 19 NCISIGKKACRF--LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAG 76
NCI+ K F +++ +D + +W +L G ++ V + FD L+ +
Sbjct: 107 NCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASC 166
Query: 77 ASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIH 136
++ IKLWD + V+TL GH N + V F P G+ S D +K+W+ CI
Sbjct: 167 SADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIK 226
Query: 137 TYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLE 196
T GH + I + DG + S D +K W++ G+ L ++ H + + F
Sbjct: 227 TLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTAN 286
Query: 197 FLLATGS 203
+ GS
Sbjct: 287 IIDIPGS 293
Score = 214 (80.4 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 59/215 (27%), Positives = 100/215 (46%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKK-ACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSP 60
A GY ++ V H V I++ + +C + + +DQ + W I K L + S
Sbjct: 219 AATGYCIKTLVGHEDWVRKITVSEDGSC--IASCSNDQTIKTWNIVKGECLATYREHSHV 276
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
V+ +AF +A ++ + G+ L E K + G N G + A+G
Sbjct: 277 VECLAFSTANIIDIPGS------LLSTPEGKS-KVKQGPGGNLVG----QCG-YLATGSR 324
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
D +KIW++ C+ TY GH + +RF P G++++S G D ++VWD+ G+ +
Sbjct: 325 DKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTI 384
Query: 181 -KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLE 214
+ H I +DF +ATG D +K W L+
Sbjct: 385 NEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKLQ 419
Score = 197 (74.4 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 46/162 (28%), Positives = 70/162 (43%)
Query: 96 LTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR 155
LTGH++ +V+FHP S D +K+WD T KGHT + I F G
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGN 161
Query: 156 WVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET 215
+ S D +K+WD + H+ ++ + F P L + S D+T+K W+ T
Sbjct: 162 LLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAAT 221
Query: 216 FELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPV 257
I + V IT DG + S +D + +W V
Sbjct: 222 GYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQT-IKTWNIV 262
Score = 191 (72.3 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 42/121 (34%), Positives = 60/121 (49%)
Query: 136 HTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL 195
H GH IN+++F P +VS D +KVWD +G+ K H ++ IDF
Sbjct: 100 HILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKT 159
Query: 196 EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSW 254
LLA+ SAD T+K WD +T++ + + V + F P G L S D +KV W
Sbjct: 160 GNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKV--W 217
Query: 255 E 255
E
Sbjct: 218 E 218
Score = 178 (67.7 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 60/240 (25%), Positives = 101/240 (42%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H+ V I K L + D + LW + +L G V V F + +
Sbjct: 147 HTNAVQDIDFDKTG-NLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQL 205
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
++ + IK+W+ ++TL GH+ + G AS D +K W+I K
Sbjct: 206 ISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGE 265
Query: 134 CIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFH 193
C+ TY+ H+ + + F+ + G + + GK K +G ++
Sbjct: 266 CLATYREHSHVVECLAFSTANIIDIPGSLLSTPE------GKS----KVKQGPGGNL-VG 314
Query: 194 PLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS-GFDDNLKVY 252
+L ATGS D+T+K W+L T + + V A+ FHP G+ L S G D ++V+
Sbjct: 315 QCGYL-ATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVW 373
Score = 39 (18.8 bits), Expect = 8.7e-20, Sum P(2) = 8.7e-20
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 904 EGEAVESLMETHDIFISTL 922
+G ++++ E H FIS L
Sbjct: 377 QGRCIKTINEAHTHFISCL 395
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 270 (100.1 bits), Expect = 9.0e-20, P = 9.0e-20
Identities = 48/183 (26%), Positives = 95/183 (51%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L++ +D + W +G T + G + PV + + +G+ +LW + +
Sbjct: 375 LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRT 434
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+R GH ++ V+FHP + A+G D +++W ++ + + GH + ++ F
Sbjct: 435 YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAF 494
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
+P+G+++ S G D +K+WDL +G L + + H +I S+ F P L+A+ S D +V+
Sbjct: 495 SPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRV 554
Query: 211 WDL 213
WD+
Sbjct: 555 WDI 557
Score = 233 (87.1 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 50/184 (27%), Positives = 85/184 (46%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
+ +G D+ LW+ + L G + VD V F + G++ ++LW ++
Sbjct: 416 YFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ 475
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
VR TGH+ ++ F P G++ AS D LK+WD+ +GHT I ++
Sbjct: 476 GNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLT 535
Query: 150 FTPDGRWVVSGGFDNVVKVWDL-----------TAGKLLHDFKFHEGHIRSIDFHPLEFL 198
F+PD + S DN V+VWD+ ++G+L+ + ++ S+ F L
Sbjct: 536 FSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGELVGVYTGQMSNVLSVQFMACNLL 595
Query: 199 LATG 202
L TG
Sbjct: 596 LVTG 599
Score = 206 (77.6 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 44/132 (33%), Positives = 68/132 (51%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
R Y L+ + H A+V+C+ + +L TG D+ V LW+ + ++ G PV S
Sbjct: 433 RTYPLRIYAGHLADVDCVKFHPNS-NYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLS 491
Query: 64 VAFD-SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
+AF + + L AG +KLWDL + + L GH N T++ F P AS MD
Sbjct: 492 LAFSPNGKYLASAGEDQR-LKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDN 550
Query: 123 NLKIWDIRKKGC 134
++++WDIR C
Sbjct: 551 SVRVWDIRNTYC 562
Score = 123 (48.4 bits), Expect = 0.00080, P = 0.00080
Identities = 50/216 (23%), Positives = 92/216 (42%)
Query: 48 PTALMSLCGLSSPVDSVAFDSAEV-----LVLAGASTGVIKLWDLEESKMVRTLTGHKSN 102
P +L ++C + ++AE+ L+ AG IKLW L SK +++ H+ +
Sbjct: 271 PPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLR-SKKLKS-EPHQVD 328
Query: 103 CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGC-IHTYKGHTRGINTIRFTPDGRWVVSGG 161
+ + H A ++ D G + +GH + + RF D ++S
Sbjct: 329 VSRI--H-----LACDILEEEDDEDD--NAGTEMKILRGHCGPVYSTRFLADSSGLLSCS 379
Query: 162 FDNVVKVWDLTAGKLLHDFKFHEGH---IRSIDFHPLEFLLATGSADRTVKFWDLETFEL 218
D ++ WDL G + ++GH + +D P A+GS DRT + W +
Sbjct: 380 EDMSIRYWDL--GSFTNTV-LYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYP 436
Query: 219 IGSTRPEVTGVHAITFHPDGRTLFSGFDDN-LKVYS 253
+ + V + FHP+ L +G D ++++S
Sbjct: 437 LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWS 472
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 247 (92.0 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 74/299 (24%), Positives = 134/299 (44%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKP-TAL----MSLCGLSSPVDSVAFDS 68
H+ V ++ + L++ D+ + +W + + T+ SL G S V S
Sbjct: 14 HNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCVISS 73
Query: 69 AEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWD 128
L+ + ++LW+L R GH ++ +V F SG D ++K+W+
Sbjct: 74 DGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSIKLWN 133
Query: 129 IRKKGCIHTY--KGHTRGINTIRFTPDGR--WVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
C +T KGH+ ++ +RF+P+ + +VS G+D +VKVW+L++ KL D H
Sbjct: 134 TLGD-CKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHIGHT 192
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG 244
G+I ++ P L A+G D T WDL + + S +HA+ F P+ L +
Sbjct: 193 GYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNAN-DEIHALVFSPNRYWLCAA 251
Query: 245 FDDNLKVYSWEPVICHDSVDMGWSTLGDL-----CIN-----DGKLLGCSFYRNSVGIW 293
++ ++ E D + ++ +G CI+ DG+ L + N + W
Sbjct: 252 TASSIIIFDLEKKSKVDELKPEFAAVGKKSREPECISLAWSADGQTLFAGYTDNIIRAW 310
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 269 (99.8 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 48/183 (26%), Positives = 95/183 (51%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L++ +D + W +G T + G + PV + + +G+ +LW + +
Sbjct: 357 LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRT 416
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+R GH ++ V+FHP + A+G D +++W ++ + + GH + ++ F
Sbjct: 417 YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAF 476
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
+P+G+++ S G D +K+WDL +G L + + H +I S+ F P L+A+ S D +V+
Sbjct: 477 SPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRV 536
Query: 211 WDL 213
WD+
Sbjct: 537 WDI 539
Score = 226 (84.6 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 49/184 (26%), Positives = 84/184 (45%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
+ +G D+ LW+ + L G + VD V F + G++ ++LW ++
Sbjct: 398 YFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ 457
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
VR TGH+ ++ F P G++ AS D LK+WD+ +GHT I ++
Sbjct: 458 GNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLT 517
Query: 150 FTPDGRWVVSGGFDNVVKVWDL-----------TAGKLLHDFKFHEGHIRSIDFHPLEFL 198
F+PD + S DN V+VWD+ ++ +L+ + ++ S+ F L
Sbjct: 518 FSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQMSNVLSVQFMACNLL 577
Query: 199 LATG 202
L TG
Sbjct: 578 LVTG 581
Score = 204 (76.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 44/132 (33%), Positives = 68/132 (51%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
R Y L+ + H A+V+C+ + +L TG D+ V LW+ + ++ G PV S
Sbjct: 415 RTYPLRIYAGHLADVDCVKFHPNS-NYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLS 473
Query: 64 VAFD-SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
+AF + + L AG +KLWDL + + L GH N T++ F P AS MD
Sbjct: 474 LAFSPNGKYLASAGEDQR-LKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDN 532
Query: 123 NLKIWDIRKKGC 134
++++WDIR C
Sbjct: 533 SVRVWDIRNTYC 544
Score = 123 (48.4 bits), Expect = 0.00077, P = 0.00077
Identities = 50/216 (23%), Positives = 92/216 (42%)
Query: 48 PTALMSLCGLSSPVDSVAFDSAEV-----LVLAGASTGVIKLWDLEESKMVRTLTGHKSN 102
P +L ++C + ++AE+ L+ AG IKLW L SK +++ H+ +
Sbjct: 253 PPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLR-SKKLKS-EPHQVD 310
Query: 103 CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGC-IHTYKGHTRGINTIRFTPDGRWVVSGG 161
+ + H A ++ D G + +GH + + RF D ++S
Sbjct: 311 VSRI--H-----LACDILEEEDDEDD--NAGTEMKILRGHCGPVYSTRFLADSSGLLSCS 361
Query: 162 FDNVVKVWDLTAGKLLHDFKFHEGH---IRSIDFHPLEFLLATGSADRTVKFWDLETFEL 218
D ++ WDL G + ++GH + +D P A+GS DRT + W +
Sbjct: 362 EDMSIRYWDL--GSFTNTV-LYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYP 418
Query: 219 IGSTRPEVTGVHAITFHPDGRTLFSGFDDN-LKVYS 253
+ + V + FHP+ L +G D ++++S
Sbjct: 419 LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWS 454
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 263 (97.6 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 59/195 (30%), Positives = 93/195 (47%)
Query: 43 WAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSN 102
W I +P +L G SPV V F L+++ + IK+WD E RTL GH +
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDS 152
Query: 103 CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGF 162
+ F G+ AS D +K+WD + CI T GH ++++ P+G +VS
Sbjct: 153 VQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 163 DNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGST 222
D +K+W++ G + F H +R + + LLA+ S D+TV+ W + T E
Sbjct: 213 DKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAEL 272
Query: 223 RPEVTGVHAITFHPD 237
R V I++ P+
Sbjct: 273 REHEHVVECISWAPE 287
Score = 211 (79.3 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 41/164 (25%), Positives = 78/164 (47%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++ +D + +W +L G + V ++FD L+ + ++ IKLWD +
Sbjct: 123 MVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGF 182
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ +RT+ GH N ++V P G+ S D +K+W++ C+ T+ GH + +R
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRP 242
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHP 194
DG + S D V+VW + + + + HE + I + P
Sbjct: 243 NQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 199 (75.1 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 37/101 (36%), Positives = 53/101 (52%)
Query: 112 GEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDL 171
G F SG D +K+WDI C+ T GH + + F P GR+VVS D +++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDY 367
Query: 172 TAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
+ + HE + S+DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 191 (72.3 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 43/159 (27%), Positives = 71/159 (44%)
Query: 96 LTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR 155
L+GH+S T V FHP S D +K+WD T KGHT + I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGK 163
Query: 156 WVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET 215
+ S D +K+WD + + H+ ++ S+ P + + S D+T+K W++ T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVAT 223
Query: 216 FELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSW 254
+ + V + + DG TL + ++ V W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLLASCSNDQTVRVW 261
Score = 185 (70.2 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 35/98 (35%), Positives = 51/98 (52%)
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
+L+G+ IK+WD+ + TL GH + V FHP G F S D L+IWD + K
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNK 370
Query: 133 GCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
C+ T H + ++ F +VV+G D VKVW+
Sbjct: 371 RCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 158 (60.7 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 28/101 (27%), Positives = 55/101 (54%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
FL++G D+ + +W I LM+L G + V V F V++ A +++WD +
Sbjct: 310 FLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKN 369
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
+ ++TL+ H+ T+++FH + +G +D +K+W+ R
Sbjct: 370 KRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 157 (60.3 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 45/161 (27%), Positives = 68/161 (42%)
Query: 136 HTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL 195
+ GH + + F P +VS D +KVWD AG K H ++ I F
Sbjct: 102 YALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQT 161
Query: 196 EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSW 254
LLA+ SAD T+K WD + FE I + V ++ P+G + S D +K++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEV 221
Query: 255 EPVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWV 294
C + + + N DG LL +V +WV
Sbjct: 222 ATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWV 262
Score = 122 (48.0 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 27/103 (26%), Positives = 51/103 (49%)
Query: 154 GRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDL 213
G +++SG D +K+WD++ G L H+ +R + FHP + + + D+T++ WD
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDY 367
Query: 214 ETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWE 255
+ + + V ++ FH + +G D +KV WE
Sbjct: 368 KNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKV--WE 408
Score = 115 (45.5 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 31/140 (22%), Positives = 59/140 (42%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H+ +V IS + + L + D + LW + ++ G V SVA +
Sbjct: 149 HTDSVQDISFDQTG-KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
++ + +K+W++ V+T TGH+ V + G AS D +++W + K
Sbjct: 208 VSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKE 267
Query: 134 CIHTYKGHTRGINTIRFTPD 153
C + H + I + P+
Sbjct: 268 CKAELREHEHVVECISWAPE 287
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 262 (97.3 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 64/246 (26%), Positives = 114/246 (46%)
Query: 36 DDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES-KMVR 94
+D + +W +L G + V+ +A D+A +++ +S IKLWD ++ ++
Sbjct: 126 EDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLK 185
Query: 95 TLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDG 154
+L GH+ ++V F P G+F S D +K WDI C++T++GH + IR + DG
Sbjct: 186 SLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDG 245
Query: 155 RWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHP---------------LEFLL 199
S D V VW + HE + +++ P +L
Sbjct: 246 TLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHIL 305
Query: 200 ATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN-LKVYSWEPVI 258
+GS DR++K W++ T +++ + V + FHP G+ L S DD L+V+
Sbjct: 306 FSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQR 365
Query: 259 CHDSVD 264
C +++
Sbjct: 366 CMKAIE 371
Score = 244 (91.0 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 55/203 (27%), Positives = 92/203 (45%)
Query: 36 DDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRT 95
D ++ W I +P L G P+ V F ++ + + IK+WD E ++ RT
Sbjct: 85 DKRQAADW-IPRPPETQKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERT 143
Query: 96 LTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK-GCIHTYKGHTRGINTIRFTPDG 154
L GH + G+ S D ++K+WD + C+ + KGH ++++ F P G
Sbjct: 144 LKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTG 203
Query: 155 RWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLE 214
+V+S D+ +K WD++ G ++ F+ H +R I L A+ S D+TV W
Sbjct: 204 DFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFA 263
Query: 215 TFELIGSTRPEVTGVHAITFHPD 237
T R V + + PD
Sbjct: 264 TKSAKLVLRDHEHAVECVEWAPD 286
Score = 227 (85.0 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 66/259 (25%), Positives = 104/259 (40%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKP-TALMSLCGLSSPVDSVAFDSAEVL 72
H+ VN I+I A + L++ D + LW G+ L SL G V SV F
Sbjct: 147 HTDAVNDIAIDA-AGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDF 205
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
VL+ + IK WD+ V T GH + G FAS +D + +W K
Sbjct: 206 VLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATK 265
Query: 133 GCIHTYKGHTRGINTIRFTPDGRW---------------VVSGGFDNVVKVWDLTAGKLL 177
+ H + + + PD + + SG D +K W++ G +L
Sbjct: 266 SAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVL 325
Query: 178 HDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPD 237
HE +R + FHP L + + D+T++ W+L + + V + FH
Sbjct: 326 FTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQT 385
Query: 238 GRTLFSG-FDDNLKVYSWE 255
+ +G D + KV WE
Sbjct: 386 SPFVITGSVDMSCKV--WE 402
Score = 211 (79.3 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 54/162 (33%), Positives = 74/162 (45%)
Query: 96 LTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR 155
LTGH+ T V FHP AS D +K+WD T KGHT +N I G+
Sbjct: 102 LTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGK 161
Query: 156 WVVSGGFDNVVKVWDL-TAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLE 214
+VS D +K+WD L K HE + S+ F P + + S D T+K WD+
Sbjct: 162 QLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDIS 221
Query: 215 TFELIGSTRPEVTGVHAITFHPDGRTLFSG--FDDNLKVYSW 254
T + + R V I DG TLF+ D + V+S+
Sbjct: 222 TGYCVYTFRGHNDWVRMIRISNDG-TLFASASLDQTVTVWSF 262
Score = 121 (47.7 bits), Expect = 0.00071, P = 0.00071
Identities = 23/100 (23%), Positives = 47/100 (47%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L +G D+ + W I L +L + V +AF +++ A +++W+L
Sbjct: 305 LFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQ 364
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
+ ++ + H+ + V FH F +G +D + K+W+ R
Sbjct: 365 RCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWECR 404
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 246 (91.7 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 72/265 (27%), Positives = 116/265 (43%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G + HS V + + +F ++G D ++ LW + G V SV
Sbjct: 65 GVPFRRLTGHSHFVQDVVLSSDG-QFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSV 123
Query: 65 AFDSAEVLVLAGASTGVIKLWD-LEESKMV--RTL---TGHKSNCTAVEFHP--FGEFFA 116
AF +++ + IKLW+ L E K L GH + V F P F
Sbjct: 124 AFSVDNRQIVSASRDRTIKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIV 183
Query: 117 SGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKL 176
SG D +K+W++ +GH +N + +PDG SGG D V +WDL GK
Sbjct: 184 SGSWDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGKR 243
Query: 177 LHDFKFHEGHI-RSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVH----- 230
L + G I S+ F P + L + D ++K WDLE+ ++ +PE+
Sbjct: 244 L--YSLDAGSIIHSLCFSPNRYWLCAATQD-SIKIWDLESKHIVQDLKPEIPVSKNQMLY 300
Query: 231 --AITFHPDGRTLFSGFDDN-LKVY 252
++ + DG TL++G+ D +++Y
Sbjct: 301 CTSLNWSADGSTLYAGYTDGTIRIY 325
Score = 230 (86.0 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 69/245 (28%), Positives = 111/245 (45%)
Query: 94 RTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPD 153
R LTGH V G+F SG D L++WD+ + GH + + ++ F+ D
Sbjct: 69 RRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVD 128
Query: 154 GRWVVSGGFDNVVKVWDL------TAGKLLHDFKFHEGHIRSIDFHPLEF--LLATGSAD 205
R +VS D +K+W+ T G L + H G + + F P F + +GS D
Sbjct: 129 NRQIVSASRDRTIKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVSGSWD 188
Query: 206 RTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVICHD--SV 263
RTVK W+L +L + V+A+ PDG SG D + + W+ S+
Sbjct: 189 RTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLL-WDLAEGKRLYSL 247
Query: 264 DMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSH-VEPYGVGAP-EPDQSI-CTEVKF 320
D G S + LC + + C+ ++S+ IW + H V+ P +Q + CT + +
Sbjct: 248 DAG-SIIHSLCFSPNRYWLCAATQDSIKIWDLESKHIVQDLKPEIPVSKNQMLYCTSLNW 306
Query: 321 NPPGS 325
+ GS
Sbjct: 307 SADGS 311
Score = 222 (83.2 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 60/212 (28%), Positives = 97/212 (45%)
Query: 54 LCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGE 113
L G S V V S L+G+ G ++LWDL R GH + +V F
Sbjct: 71 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNR 130
Query: 114 FFASGCMDTNLKIWDIRKKGCIHTY-------KGHTRGINTIRFTPDG--RWVVSGGFDN 164
S D +K+W+ + C +T +GH ++ +RF+P+ +VSG +D
Sbjct: 131 QIVSASRDRTIKLWNTLGE-CKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVSGSWDR 189
Query: 165 VVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDL-ETFELIGSTR 223
VKVW+LT KL + + H G++ ++ P L A+G D WDL E L
Sbjct: 190 TVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGKRLYSLDA 249
Query: 224 PEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
+ +H++ F P+ L + D++K++ E
Sbjct: 250 GSI--IHSLCFSPNRYWLCAATQDSIKIWDLE 279
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 34/141 (24%), Positives = 60/141 (42%)
Query: 88 EESKMVRTLTGHKSNCTAVEFHPFGE--FFASGCMDTNLKIWDIRK------KGC----- 134
E + + GH TA+ P F S D +L +WD+ +G
Sbjct: 6 ESLVLAGVMHGHNDVVTAIAT-PIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEY 64
Query: 135 ---IHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSID 191
GH+ + + + DG++ +SG +D +++WDL+ G F H+ + S+
Sbjct: 65 GVPFRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVA 124
Query: 192 FHPLEFLLATGSADRTVKFWD 212
F + + S DRT+K W+
Sbjct: 125 FSVDNRQIVSASRDRTIKLWN 145
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 262 (97.3 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 57/195 (29%), Positives = 93/195 (47%)
Query: 43 WAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSN 102
W I +P +L G SPV V F ++++ + IK+WD E RTL GH +
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDS 152
Query: 103 CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGF 162
+ F G+ AS D +K+WD + CI T GH ++++ P+G +VS
Sbjct: 153 VQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 163 DNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGST 222
D +K+W++ G + F H +R + + L+A+ S D+TV+ W + T E
Sbjct: 213 DKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAEL 272
Query: 223 RPEVTGVHAITFHPD 237
R V I++ P+
Sbjct: 273 REHEHVVECISWAPE 287
Score = 217 (81.4 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 53/196 (27%), Positives = 90/196 (45%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++ +D + +W +L G + V ++FD L+ + ++ IKLWD +
Sbjct: 123 IVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGF 182
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ +RT+ GH N ++V P G+ S D +K+W++ C+ T+ GH + +R
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRP 242
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDF-----HPLEFLLATGSAD 205
DG + S D V+VW + + + + HE + I + HP L ATGS
Sbjct: 243 NQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPT-ILEATGS-- 299
Query: 206 RTVKFWDLETFELIGS 221
T K F L GS
Sbjct: 300 ETKKSGKPGPFLLSGS 315
Score = 189 (71.6 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 43/159 (27%), Positives = 71/159 (44%)
Query: 96 LTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR 155
L+GH+S T V FHP S D +K+WD T KGHT + I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 156 WVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET 215
+ S D +K+WD + + H+ ++ S+ P + + S D+T+K W++ T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVAT 223
Query: 216 FELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSW 254
+ + V + + DG TL + ++ V W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASSSNDQTVRVW 261
Score = 182 (69.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 112 GEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDL 171
G F SG D +K+WD+ C+ T GH + + P G+++VS D +++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDY 367
Query: 172 TAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
+ HE + S+DFH + TGS D+TVK W+
Sbjct: 368 KNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 173 (66.0 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
+L+G+ IK+WD+ + TL GH + V HP G++ S D L+IWD + K
Sbjct: 311 LLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNK 370
Query: 133 GCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
C T H + ++ F +VV+G D VKVW+
Sbjct: 371 RCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 154 (59.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 44/161 (27%), Positives = 68/161 (42%)
Query: 136 HTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL 195
+ GH + + F P +VS D +KVWD G K H ++ I F
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHT 161
Query: 196 EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSW 254
LLA+ SAD T+K WD + FE I + V ++ P+G + S D +K++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 255 EPVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWV 294
C + + + N DG L+ S +V +WV
Sbjct: 222 ATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWV 262
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 25/101 (24%), Positives = 53/101 (52%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
FL++G D+ + +W + LM+L G + V V +++ A +++WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKN 369
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
+ +TL+ H+ T+++FH + +G +D +K+W+ R
Sbjct: 370 KRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 119 (46.9 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 32/140 (22%), Positives = 58/140 (41%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H+ +V IS + L + D + LW + ++ G V SVA +
Sbjct: 149 HTDSVQDISFDHTG-KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
++ + IK+W++ V+T TGH+ V + G AS D +++W + K
Sbjct: 208 VSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKE 267
Query: 134 CIHTYKGHTRGINTIRFTPD 153
C + H + I + P+
Sbjct: 268 CKAELREHEHVVECISWAPE 287
Score = 114 (45.2 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 28/113 (24%), Positives = 52/113 (46%)
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGS 203
G T + G +++SG D +K+WD++ G L H+ +R + HP + + +
Sbjct: 298 GSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCA 357
Query: 204 ADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWE 255
D+T++ WD + + V ++ FH + +G D +KV WE
Sbjct: 358 DDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 245 (91.3 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 77/277 (27%), Positives = 125/277 (45%)
Query: 5 GYKLQEFVAHSANVNCISIGKK---ACRFLITGGDDQKVNLWAIG--KPTALMSLCGLSS 59
G ++ AH + ++ GK +I+G D V +W K +L G
Sbjct: 6 GILFKQEQAHDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQL 65
Query: 60 PVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGC 119
V SV + + + I+LWDLE K ++++ + ++ F P +F A+G
Sbjct: 66 GVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGS 125
Query: 120 MDTNLKIWDIR--KKGCIHTYKGHTRG--INTIRFTPDGRWVVSGGFDNVVKVWDLTAGK 175
+ I+ + KK Y TRG I +I ++PDG+++ SG D ++ ++D+ GK
Sbjct: 126 HVGKVNIFGVETGKK----EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK 181
Query: 176 LLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFH 235
LLH + H IRS+ F P LL T S D +K +D++ L G+ + V + F
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFC 241
Query: 236 PDGRTLFSGFDD-NLKVYSWEPVIC-H---DSVDMGW 267
PD S D ++KV+ C H D D W
Sbjct: 242 PDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVW 278
Score = 222 (83.2 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 53/219 (24%), Positives = 102/219 (46%)
Query: 37 DQKVNLWAIGKPTALMSLCGLSSPVD--SVAFDSAEVLVLAGASTGVIKLWDLEESKMVR 94
D + LW + + S+ + PVD S+AF + G+ G + ++ +E K
Sbjct: 85 DAHIRLWDLETGKQIKSID--AGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEY 142
Query: 95 TLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDG 154
+L ++ + P G++ ASG +D + I+DI +HT +GH I ++ F+PD
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS 202
Query: 155 RWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLE 214
+ +V+ D +K++D+ L H + ++ F P + + S+D++VK WD
Sbjct: 203 QLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAG 262
Query: 215 TFELIGSTRPEVTGVHAITFHPDGRTLFS-GFDDNLKVY 252
T + + V + ++ G + S G D + +Y
Sbjct: 263 TRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIY 301
Score = 197 (74.4 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
+FL TG KVN++ + SL + S+A+ + +GA G+I ++D+
Sbjct: 119 QFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA 178
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
K++ TL GH ++ F P + + D +KI+D++ T GH + +
Sbjct: 179 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNV 238
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTV 208
F PD VS D VKVWD +H F H+ + + ++ + + D+ +
Sbjct: 239 AFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEI 298
Query: 209 KFWD 212
+D
Sbjct: 299 HIYD 302
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 245 (91.3 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 77/277 (27%), Positives = 125/277 (45%)
Query: 5 GYKLQEFVAHSANVNCISIGKK---ACRFLITGGDDQKVNLWAIG--KPTALMSLCGLSS 59
G ++ AH + ++ GK +I+G D V +W K +L G
Sbjct: 6 GILFKQEQAHDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQL 65
Query: 60 PVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGC 119
V SV + + + I+LWDLE K ++++ + ++ F P +F A+G
Sbjct: 66 GVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGS 125
Query: 120 MDTNLKIWDIR--KKGCIHTYKGHTRG--INTIRFTPDGRWVVSGGFDNVVKVWDLTAGK 175
+ I+ + KK Y TRG I +I ++PDG+++ SG D ++ ++D+ GK
Sbjct: 126 HVGKVNIFGVETGKK----EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK 181
Query: 176 LLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFH 235
LLH + H IRS+ F P LL T S D +K +D++ L G+ + V + F
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFC 241
Query: 236 PDGRTLFSGFDD-NLKVYSWEPVIC-H---DSVDMGW 267
PD S D ++KV+ C H D D W
Sbjct: 242 PDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVW 278
Score = 222 (83.2 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 53/219 (24%), Positives = 102/219 (46%)
Query: 37 DQKVNLWAIGKPTALMSLCGLSSPVD--SVAFDSAEVLVLAGASTGVIKLWDLEESKMVR 94
D + LW + + S+ + PVD S+AF + G+ G + ++ +E K
Sbjct: 85 DAHIRLWDLETGKQIKSID--AGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEY 142
Query: 95 TLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDG 154
+L ++ + P G++ ASG +D + I+DI +HT +GH I ++ F+PD
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS 202
Query: 155 RWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLE 214
+ +V+ D +K++D+ L H + ++ F P + + S+D++VK WD
Sbjct: 203 QLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAG 262
Query: 215 TFELIGSTRPEVTGVHAITFHPDGRTLFS-GFDDNLKVY 252
T + + V + ++ G + S G D + +Y
Sbjct: 263 TRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIY 301
Score = 197 (74.4 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
+FL TG KVN++ + SL + S+A+ + +GA G+I ++D+
Sbjct: 119 QFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA 178
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
K++ TL GH ++ F P + + D +KI+D++ T GH + +
Sbjct: 179 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNV 238
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTV 208
F PD VS D VKVWD +H F H+ + + ++ + + D+ +
Sbjct: 239 AFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEI 298
Query: 209 KFWD 212
+D
Sbjct: 299 HIYD 302
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 267 (99.0 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 66/218 (30%), Positives = 108/218 (49%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G L H++ V C+++ A L+TG D + +W + L +L G + V V
Sbjct: 328 GSLLHTLQGHTSTVRCMAM---AGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCV 384
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
FD V+ +G +K+W+ + +RTLTGH + ++ F SG +DT++
Sbjct: 385 QFDGTTVV--SGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSI 442
Query: 125 KIWDI-RKKG--CIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
++WD R +G C+ +GHT + ++ G +VS D+ V+VWD+ G +H
Sbjct: 443 RVWDFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRVWDIHEGTCVHMLS 500
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELI 219
H I S+ + ++AT S D TVK WD+E LI
Sbjct: 501 GHRSAITSLQWFGRN-MVATSSDDGTVKLWDIERGALI 537
Score = 263 (97.6 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 52/184 (28%), Positives = 91/184 (49%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L+TG DD + +W I K + +L G + V + +++G++ +K+W +
Sbjct: 269 LVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDG 328
Query: 91 KMVRTLTGHKSN--CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
++ TL GH S C A+ G +G DT L++WD+ + T GH + +
Sbjct: 329 SLLHTLQGHTSTVRCMAMA----GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCV 384
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTV 208
+F DG VVSGG+D VK+W+ G+ + H + S+ F ++ +GS D ++
Sbjct: 385 QF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSI 442
Query: 209 KFWD 212
+ WD
Sbjct: 443 RVWD 446
Score = 230 (86.0 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 60/214 (28%), Positives = 100/214 (46%)
Query: 83 KLWDLEESKMVRTLTGHKSNC-TAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGH 141
K W+ L GH+ + T ++ H + +G D LK+W I K ++T GH
Sbjct: 238 KNWNANPIMGSAVLRGHEDHVITCMQIHD--DVLVTGSDDNTLKVWCIDKGEVMYTLVGH 295
Query: 142 TRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLAT 201
T G+ T + + GR++VSG D VKVW G LLH + H +R + +L T
Sbjct: 296 TGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAM--AGSILVT 353
Query: 202 GSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEPVICH 260
GS D T++ WD+E+ + + V + F DG T+ SG +D +K+++ C
Sbjct: 354 GSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCI 411
Query: 261 DSVDMGWSTLGDLCINDGKLLGCS-FYRNSVGIW 293
++ + + L + + CS S+ +W
Sbjct: 412 RTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVW 445
Score = 229 (85.7 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 64/254 (25%), Positives = 114/254 (44%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKAC-RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
+G + V H+ V I + C R++++G D+ V +W+ + L +L G +S V
Sbjct: 285 KGEVMYTLVGHTGGVWTSQISQ--CGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVR 342
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
+A + +LV T +++WD+E + + TL GH + V+F G SG D
Sbjct: 343 CMAM-AGSILVTGSRDT-TLRVWDVESGRHLATLHGHHAAVRCVQFD--GTTVVSGGYDF 398
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
+KIW+ CI T GH + ++ F + V SG D ++VWD T +
Sbjct: 399 TVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVAL 458
Query: 183 HEGHIRSIDFHPLEF-LLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTL 241
+GH L +L + +AD V+ WD+ + + + ++ + GR +
Sbjct: 459 LQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWF--GRNM 516
Query: 242 FSGFDDNLKVYSWE 255
+ D+ V W+
Sbjct: 517 VATSSDDGTVKLWD 530
Score = 211 (79.3 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 47/186 (25%), Positives = 88/186 (47%)
Query: 70 EVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI 129
+VLV G+ +K+W +++ +++ TL GH + G + SG D +K+W
Sbjct: 267 DVLV-TGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWST 325
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
+HT +GHT + + G +V+G D ++VWD+ +G+ L H +R
Sbjct: 326 VDGSLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRC 383
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDN 248
+ F + +G D TVK W+ T I + V+++ F + + SG D +
Sbjct: 384 VQFDGTT--VVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTS 441
Query: 249 LKVYSW 254
++V+ +
Sbjct: 442 IRVWDF 447
Score = 201 (75.8 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 50/179 (27%), Positives = 85/179 (47%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G L H A V C+ +++GG D V +W + +L G ++ V S+
Sbjct: 368 GRHLATLHGHHAAVRCVQFDGTT---VVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSL 424
Query: 65 AFDSAEVLVLAGASTGVIKLWDL---EESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
F+S +V +G+ I++WD E + V L GH S + ++ G S D
Sbjct: 425 LFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNAD 482
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR-WVVSGGFDNVVKVWDLTAGKLLHD 179
+++++WDI + C+H GH I ++++ GR V + D VK+WD+ G L+ D
Sbjct: 483 SHVRVWDIHEGTCVHMLSGHRSAITSLQWF--GRNMVATSSDDGTVKLWDIERGALIRD 539
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 267 (99.0 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 66/218 (30%), Positives = 108/218 (49%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G L H++ V C+++ A L+TG D + +W + L +L G + V V
Sbjct: 328 GSLLHTLQGHTSTVRCMAM---AGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCV 384
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
FD V+ +G +K+W+ + +RTLTGH + ++ F SG +DT++
Sbjct: 385 QFDGTTVV--SGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSI 442
Query: 125 KIWDI-RKKG--CIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
++WD R +G C+ +GHT + ++ G +VS D+ V+VWD+ G +H
Sbjct: 443 RVWDFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRVWDIHEGTCVHMLS 500
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELI 219
H I S+ + ++AT S D TVK WD+E LI
Sbjct: 501 GHRSAITSLQWFGRN-MVATSSDDGTVKLWDIERGALI 537
Score = 263 (97.6 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 52/184 (28%), Positives = 91/184 (49%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L+TG DD + +W I K + +L G + V + +++G++ +K+W +
Sbjct: 269 LVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDG 328
Query: 91 KMVRTLTGHKSN--CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
++ TL GH S C A+ G +G DT L++WD+ + T GH + +
Sbjct: 329 SLLHTLQGHTSTVRCMAMA----GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCV 384
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTV 208
+F DG VVSGG+D VK+W+ G+ + H + S+ F ++ +GS D ++
Sbjct: 385 QF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSI 442
Query: 209 KFWD 212
+ WD
Sbjct: 443 RVWD 446
Score = 230 (86.0 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 60/214 (28%), Positives = 100/214 (46%)
Query: 83 KLWDLEESKMVRTLTGHKSNC-TAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGH 141
K W+ L GH+ + T ++ H + +G D LK+W I K ++T GH
Sbjct: 238 KNWNANPIMGSAVLRGHEDHVITCMQIHD--DVLVTGSDDNTLKVWCIDKGEVMYTLVGH 295
Query: 142 TRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLAT 201
T G+ T + + GR++VSG D VKVW G LLH + H +R + +L T
Sbjct: 296 TGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAM--AGSILVT 353
Query: 202 GSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEPVICH 260
GS D T++ WD+E+ + + V + F DG T+ SG +D +K+++ C
Sbjct: 354 GSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCI 411
Query: 261 DSVDMGWSTLGDLCINDGKLLGCS-FYRNSVGIW 293
++ + + L + + CS S+ +W
Sbjct: 412 RTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVW 445
Score = 229 (85.7 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 64/254 (25%), Positives = 114/254 (44%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKAC-RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
+G + V H+ V I + C R++++G D+ V +W+ + L +L G +S V
Sbjct: 285 KGEVMYTLVGHTGGVWTSQISQ--CGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVR 342
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
+A + +LV T +++WD+E + + TL GH + V+F G SG D
Sbjct: 343 CMAM-AGSILVTGSRDT-TLRVWDVESGRHLATLHGHHAAVRCVQFD--GTTVVSGGYDF 398
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
+KIW+ CI T GH + ++ F + V SG D ++VWD T +
Sbjct: 399 TVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVAL 458
Query: 183 HEGHIRSIDFHPLEF-LLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTL 241
+GH L +L + +AD V+ WD+ + + + ++ + GR +
Sbjct: 459 LQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWF--GRNM 516
Query: 242 FSGFDDNLKVYSWE 255
+ D+ V W+
Sbjct: 517 VATSSDDGTVKLWD 530
Score = 211 (79.3 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 47/186 (25%), Positives = 88/186 (47%)
Query: 70 EVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI 129
+VLV G+ +K+W +++ +++ TL GH + G + SG D +K+W
Sbjct: 267 DVLV-TGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWST 325
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
+HT +GHT + + G +V+G D ++VWD+ +G+ L H +R
Sbjct: 326 VDGSLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRC 383
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDN 248
+ F + +G D TVK W+ T I + V+++ F + + SG D +
Sbjct: 384 VQFDGTT--VVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTS 441
Query: 249 LKVYSW 254
++V+ +
Sbjct: 442 IRVWDF 447
Score = 201 (75.8 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 50/179 (27%), Positives = 85/179 (47%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G L H A V C+ +++GG D V +W + +L G ++ V S+
Sbjct: 368 GRHLATLHGHHAAVRCVQFDGTT---VVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSL 424
Query: 65 AFDSAEVLVLAGASTGVIKLWDL---EESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
F+S +V +G+ I++WD E + V L GH S + ++ G S D
Sbjct: 425 LFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNAD 482
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR-WVVSGGFDNVVKVWDLTAGKLLHD 179
+++++WDI + C+H GH I ++++ GR V + D VK+WD+ G L+ D
Sbjct: 483 SHVRVWDIHEGTCVHMLSGHRSAITSLQWF--GRNMVATSSDDGTVKLWDIERGALIRD 539
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 269 (99.8 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 58/240 (24%), Positives = 112/240 (46%)
Query: 13 AHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVL 72
AH + + + ++L++ V W A M + +AF +V
Sbjct: 173 AHDSAIRALKWASNE-QWLLSADQGGYVKYWQPNMNNAHMFSAHKDEAIRGLAFAPTDVK 231
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN--LKIWDIR 130
+ G ++WD R L GH + +++HP A+G DT +KIWD +
Sbjct: 232 FATASDDGTARVWDFARYTEERVLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPK 291
Query: 131 KKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSI 190
C+ T + H + + F +G W+++GG D++VK++D+ K + ++ H+ + S+
Sbjct: 292 SGSCLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVISL 351
Query: 191 DFHPL-EFLLATGSADRTVKFWDLETFELIGSTR-PEVTGVHAITFHPDGRTLFSGFDDN 248
+HP+ E L +G D ++ +W ++ + IG + ++ +HP G L +G +DN
Sbjct: 352 AWHPIHEGLFVSGGGDGSIVYWMVDGEKEIGLLEHAHDQAIWSMKWHPLGHILATGSNDN 411
Score = 185 (70.2 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 85/362 (23%), Positives = 146/362 (40%)
Query: 60 PVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGC 119
PV SV + ++ G TG LW+ L H S A+++ ++ S
Sbjct: 135 PVYSVCWSPEGKRLITGCQTGEFTLWNGTAFNFETILQAHDSAIRALKWASNEQWLLSAD 194
Query: 120 MDTNLKIWDIRKKGCIHTYKGHT-RGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLH 178
+K W H + H I + F P + D +VWD
Sbjct: 195 QGGYVKYWQPNMNNA-HMFSAHKDEAIRGLAFAPTDVKFATASDDGTARVWDFARYTEER 253
Query: 179 DFKFHEGHIRSIDFHPLEFLLATGSAD--RTVKFWDLETFELIGSTRPEVTGVHAITFHP 236
+ H +R ID+HP + L+ATGS D + VK WD ++ + + + + V A+ F+
Sbjct: 254 VLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAVEFNK 313
Query: 237 DGRTLFSGFDDNL-KVYS------WEPVICH--DSVDMGWSTLGD-LCINDGKLLGCSFY 286
+G L +G D+L K+Y H + + + W + + L ++ G G
Sbjct: 314 NGNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVISLAWHPIHEGLFVSGG---G---- 366
Query: 287 RNSVGIWVADVSHVEPYGVGAPEPDQSICTEVKFNPPGSHSLEKVGIIGRSTSGFRSTSP 346
S+ W+ D + G+ DQ+I + +K++P G H L G +T + P
Sbjct: 367 DGSIVYWMVDGE--KEIGLLEHAHDQAIWS-MKWHPLG-HILA-TGSNDNNTKFWARNRP 421
Query: 347 DYETKDIKTIYVDSTGGKPVASQKIGPLNS---PKVVPPLDSEEISDL-QTEKQNPAIGV 402
+DI + +T IG L+ P++ PP S E + + + P +G+
Sbjct: 422 GDTVEDI--FGLSNTN-------MIGHLDKEREPRMAPPKPSIETQETYRPDTFIPGMGL 472
Query: 403 PE 404
E
Sbjct: 473 DE 474
Score = 52 (23.4 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 24/120 (20%), Positives = 42/120 (35%)
Query: 631 TAPQQTRLSSNIDPVANVTPQTLPSGNEDQAANVTPQTRPSSNEDQTANVIRQTRPSSNE 690
TAP + S+ + + P PSG + P + ++ Q I R
Sbjct: 682 TAPSSSNGSTGDVDMRTMVPNQPPSGEPEHWRGPPPVSHQQQSQQQHPPPINMQRMDPRR 741
Query: 691 DQAVIVNPQTRRHSNEDQASNIAPYTRHDRNEDRATNI-TPQSKISRNQDQATNITSHMG 749
D ++ S++ S P + + N PQ + +NQ+Q N + G
Sbjct: 742 DPRMLSG-----RSDQLSPSGPPPQQQQSSAQQGGKNQWMPQFEAGQNQNQG-NYAGNRG 795
>RGD|1306281 [details] [associations]
symbol:Aamp "angio-associated, migratory cell protein"
species:10116 "Rattus norvegicus" [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0014909 "smooth muscle cell migration"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306281 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 CTD:14
GeneTree:ENSGT00690000102167 OMA:VWSFEVG EMBL:CH474004
RefSeq:NP_001100390.1 UniGene:Rn.13592 ProteinModelPortal:G3V7V2
PRIDE:G3V7V2 Ensembl:ENSRNOT00000019497 GeneID:301512
KEGG:rno:301512 NextBio:648863 Uniprot:G3V7V2
Length = 435
Score = 262 (97.3 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 63/218 (28%), Positives = 97/218 (44%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAE 70
F HSA+V C+S+ K +TGG+D K +W + L G V F
Sbjct: 88 FALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDS 147
Query: 71 VLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
LV G +G++K+W +E + V + + +E+HP +G D N +W +
Sbjct: 148 TLVATGDMSGLLKVWQVETKEEVWSFEA--GDLEWMEWHPRAPVLLAGTADGNTWMWKVP 205
Query: 131 KKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGH---I 187
C T++G R PDG+ V G D +++WDL G +H K EGH +
Sbjct: 206 NGDC-KTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGNPIHVLKGTEGHQGPL 264
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPE 225
+ + L+ TGS D K T +++G RPE
Sbjct: 265 TCVATNQDGSLILTGSVDCQAKLVSATTGKVVGVFRPE 302
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 244 (91.0 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 70/252 (27%), Positives = 117/252 (46%)
Query: 25 KKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGAST--GVI 82
K+ ++TG D V +W + + V+ D + L +A +S+ I
Sbjct: 29 KENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHI 88
Query: 83 KLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHT 142
+LWDLE K ++++ + + F P + A+G + I+ + + G Y T
Sbjct: 89 RLWDLENGKQMKSIDAGPVDAWTLAFSPDSQHLATGTHMGKVNIFGV-ESGK-KEYSLDT 146
Query: 143 RG--INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLA 200
RG I +I ++PDG+++ SG D ++ ++D+ GKLLH + H IRS+ F P LL
Sbjct: 147 RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLV 206
Query: 201 TGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD-NLKVYSWEPVIC 259
T S D +K +D++ L G+ + V + F PD S D ++KV+ C
Sbjct: 207 TASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 266
Query: 260 -H---DSVDMGW 267
H D D W
Sbjct: 267 IHTFFDHQDQVW 278
Score = 222 (83.2 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 54/219 (24%), Positives = 103/219 (47%)
Query: 37 DQKVNLWAIGKPTALMSLCGLSSPVDS--VAFDSAEVLVLAGASTGVIKLWDLEESKMVR 94
D + LW + + S+ + PVD+ +AF + G G + ++ +E K
Sbjct: 85 DAHIRLWDLENGKQMKSID--AGPVDAWTLAFSPDSQHLATGTHMGKVNIFGVESGKKEY 142
Query: 95 TLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDG 154
+L ++ + P G++ ASG +D + I+DI +HT +GH I ++ F+PD
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS 202
Query: 155 RWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLE 214
+ +V+ D +K++D+ L H + ++ F P + + S+D++VK WD+
Sbjct: 203 QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG 262
Query: 215 TFELIGSTRPEVTGVHAITFHPDGRTLFS-GFDDNLKVY 252
T I + V + ++ +G + S G D + VY
Sbjct: 263 TRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Score = 205 (77.2 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 42/142 (29%), Positives = 76/142 (53%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
++L +G D +N++ I L +L G + P+ S+ F L++ + G IK++D++
Sbjct: 161 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 220
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ + TL+GH S V F P F S D ++K+WD+ + CIHT+ H + +
Sbjct: 221 HANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGV 280
Query: 149 RFTPDGRWVVSGGFDNVVKVWD 170
++ +G +VS G D + V+D
Sbjct: 281 KYNGNGSKIVSVGDDQEIHVYD 302
Score = 192 (72.6 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 45/182 (24%), Positives = 81/182 (44%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L TG KVN++ + SL + S+A+ + +GA G+I ++D+
Sbjct: 121 LATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG 180
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
K++ TL GH ++ F P + + D +KI+D++ T GH + + F
Sbjct: 181 KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAF 240
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
PD VS D VKVWD+ +H F H+ + + ++ + + D+ +
Sbjct: 241 CPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHV 300
Query: 211 WD 212
+D
Sbjct: 301 YD 302
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 244 (91.0 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 67/255 (26%), Positives = 120/255 (47%)
Query: 53 SLCGLSSPVDSVA--FDSAEVLVLAGASTGVIKLWDL-EESKMV----RTLTGHKSNCTA 105
++C + V ++A D+++V+V + +I LW L +E K R +TGH
Sbjct: 10 TMCAHTDMVTAIATPVDNSDVIVTSSRDKSII-LWKLTKEDKSYGVAQRRMTGHSHFVQD 68
Query: 106 VEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNV 165
V G+F SG D L++WD+ + GHT+ + ++ F+ D R +VS D
Sbjct: 69 VVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRT 128
Query: 166 VKVWDLTAGKLLHDFKFHEGH---IRSIDFHPLEFL--LATGSADRTVKFWDLETFELIG 220
+K+W+ T G+ + +GH + + F P + + + S D+TVK W+L+ +L
Sbjct: 129 IKLWN-TLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRN 187
Query: 221 STRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVICHD--SVDMGWSTLGDLCINDG 278
+ ++ + PDG SG D + + W+ S++ G S + LC +
Sbjct: 188 TLAGHSGYLNTVAVSPDGSLCASGGKDGV-ILLWDLAEGKKLYSLEAG-SIIHSLCFSPN 245
Query: 279 KLLGCSFYRNSVGIW 293
+ C+ NS+ IW
Sbjct: 246 RYWLCAATENSIRIW 260
Score = 240 (89.5 bits), Expect = 6.0e-19, P = 6.0e-19
Identities = 64/253 (25%), Positives = 113/253 (44%)
Query: 13 AHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKP-----TALMSLCGLSSPVDSVAFD 67
AH+ V I+ ++T D+ + LW + K A + G S V V
Sbjct: 13 AHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLS 72
Query: 68 SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIW 127
S L+G+ G ++LWDL + R GH + +V F S D +K+W
Sbjct: 73 SDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Query: 128 DIRKKGCIHTYK---GHTRGINTIRFTPDGR--WVVSGGFDNVVKVWDLTAGKLLHDFKF 182
+ + C +T GH ++ +RF+P+ +VS +D VKVW+L KL +
Sbjct: 133 NTLGE-CKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAG 191
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLF 242
H G++ ++ P L A+G D + WDL + + S +H++ F P+ L
Sbjct: 192 HSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSI-IHSLCFSPNRYWLC 250
Query: 243 SGFDDNLKVYSWE 255
+ +++++++ E
Sbjct: 251 AATENSIRIWDLE 263
Score = 237 (88.5 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 71/272 (26%), Positives = 121/272 (44%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G + HS V + + +F ++G D ++ LW + + G + V SV
Sbjct: 53 GVAQRRMTGHSHFVQDVVLSSDG-QFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSV 111
Query: 65 AFDSAEVLVLAGASTGVIKLWD-LEESKM-VRTLTGHKSNCTAVEFHP--FGEFFASGCM 120
AF + +++ + IKLW+ L E K + GHK + V F P S
Sbjct: 112 AFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASW 171
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
D +K+W+++ +T GH+ +NT+ +PDG SGG D V+ +WDL GK L+
Sbjct: 172 DKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL 231
Query: 181 KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
+ I S+ F P + L + + +++ WDLE+ ++ + ++ T DG T
Sbjct: 232 EAGS-IIHSLCFSPNRYWLCAAT-ENSIRIWDLESKSVVEDLKVDLKAEAEKT---DGST 286
Query: 241 LFSGFDDNLKVYSWEPVICHDSVDMGWSTLGD 272
G + KV + C + WS G+
Sbjct: 287 ---GIGNKTKV-----IYC---TSLNWSADGN 307
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 266 (98.7 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 52/186 (27%), Positives = 97/186 (52%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTG-VIKLWDLEE 89
L++ +D + W +G T + G + PV + S L A AS +LW +
Sbjct: 353 LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDI-SPHSLYFASASHDRTARLWSFDR 411
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
+ +R GH ++ V+FHP + A+G D +++W ++ + + GH + ++
Sbjct: 412 TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLA 471
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
F+P+G+++ S G D +K+WDL +G L + + H +I S+ F P L+A+ S D +V+
Sbjct: 472 FSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVR 531
Query: 210 FWDLET 215
WD+ +
Sbjct: 532 VWDIRS 537
Score = 222 (83.2 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 49/184 (26%), Positives = 83/184 (45%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
+ + D+ LW+ + L G + VD V F + G++ ++LW ++
Sbjct: 394 YFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQ 453
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
VR TGH+ ++ F P G++ AS D LK+WD+ +GHT I ++
Sbjct: 454 GNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLT 513
Query: 150 FTPDGRWVVSGGFDNVVKVWDL-----------TAGKLLHDFKFHEGHIRSIDFHPLEFL 198
F+PD V S DN V+VWD+ ++ +L+ + ++ S+ F L
Sbjct: 514 FSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSELVGVYTGQMSNVLSVQFMACNLL 573
Query: 199 LATG 202
L TG
Sbjct: 574 LVTG 577
Score = 207 (77.9 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 44/132 (33%), Positives = 68/132 (51%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
R Y L+ + H A+V+C+ + +L TG D+ V LW+ + ++ G PV S
Sbjct: 411 RTYPLRIYAGHLADVDCVKFHPNS-NYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLS 469
Query: 64 VAFD-SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
+AF + + L AG +KLWDL + + L GH N T++ F P AS MD
Sbjct: 470 LAFSPNGKYLASAGEDQR-LKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDN 528
Query: 123 NLKIWDIRKKGC 134
++++WDIR C
Sbjct: 529 SVRVWDIRSSHC 540
Score = 168 (64.2 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 49/212 (23%), Positives = 85/212 (40%)
Query: 93 VRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTP 152
++ L GH + F S D +++ WD+ Y+GH + + +P
Sbjct: 331 MKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISP 390
Query: 153 DGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSID---FHPLEFLLATGSADRTVK 209
+ S D ++W + + + GH+ +D FHP LATGS D+TV+
Sbjct: 391 HSLYFASASHDRTARLWSFDR---TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVR 447
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS-GFDDNLKVYSWEPVICHDSVDMGWS 268
W + + V ++ F P+G+ L S G D LK++ + +
Sbjct: 448 LWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTD 507
Query: 269 TLGDLCIN-DGKLLGCSFYRNSVGIWVADVSH 299
+ L + D L+ + NSV +W SH
Sbjct: 508 NITSLTFSPDSSLVASASMDNSVRVWDIRSSH 539
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 266 (98.7 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 75/251 (29%), Positives = 124/251 (49%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAI-GKPTALM-SLCGLSSPVDSVAFDS 68
F AH VN + + R L TGG D++V LW + G+ SL G ++ + S+ FDS
Sbjct: 318 FDAHDGEVNAVQFSPGS-RLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDS 376
Query: 69 AEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWD 128
A +LA ++ ++W +++ ++ TLTGH + +F SG D LK+WD
Sbjct: 377 AGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWD 436
Query: 129 IRKKGCIHT-YKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHI 187
+R K CI T + G + N I T + V+SG FD ++ WD+ + ++ + + G I
Sbjct: 437 LRSKVCIKTVFAGSS--CNDIVCTE--QCVMSGHFDKKIRFWDIRSESIVREMELL-GKI 491
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLETFELIGS-TRPEVT-GVH--AITFHPDGRTLFS 243
++D +P L + S D +K DL T + + + P G + F PDG + +
Sbjct: 492 TALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRVVFSPDGSYVAA 551
Query: 244 GFDDNLKVYSW 254
G + +Y W
Sbjct: 552 GSAEG-SLYIW 561
Score = 203 (76.5 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 74/293 (25%), Positives = 125/293 (42%)
Query: 49 TALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDL--EESKMVRTLTGHKSNCTAV 106
TAL V++V F L+ G +KLW++ E+ + +L+G + T++
Sbjct: 313 TALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSI 372
Query: 107 EFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVV 166
EF G + + D +IW + HT GH+ + + +F D +VSG D +
Sbjct: 373 EFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTL 432
Query: 167 KVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEV 226
K+WDL + K+ F D E + +G D+ ++FWD+ + ++ E+
Sbjct: 433 KLWDLRS-KVCIKTVFAGSSCN--DIVCTEQCVMSGHFDKKIRFWDIRSESIVREM--EL 487
Query: 227 TG-VHAITFHPDGRTLFS-GFDDNLKVYSWEPVICHDSVDM-GWSTLGD----LCINDGK 279
G + A+ +P+ L S DD LKV + G+ D + DG
Sbjct: 488 LGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRVVFSPDGS 547
Query: 280 LLGCSFYRNSVGIWVADVSHVEPYGVGAPEPDQSICTEVKFNPPGSH--SLEK 330
+ S+ IW VE V + + SI V ++P GSH S++K
Sbjct: 548 YVAAGSAEGSLYIWSVLTGKVEK--VLSKQHSSSI-NAVAWSPSGSHVVSVDK 597
Score = 142 (55.0 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 48/195 (24%), Positives = 83/195 (42%)
Query: 6 YKLQE-FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
Y+L+ HS V R +++G D+ + LW + + ++ SS D V
Sbjct: 398 YRLRHTLTGHSGKVLSAKFLLDNAR-IVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIV 456
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
E V++G I+ WD+ +VR + TA++ +P S D L
Sbjct: 457 C---TEQCVMSGHFDKKIRFWDIRSESIVREME-LLGKITALDLNPERTELLSCSRDDLL 512
Query: 125 KIWDIRKKGCIHTYK--GHTRGINTIR--FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
K+ D+R T+ G G + R F+PDG +V +G + + +W + GK+
Sbjct: 513 KVIDLRTNAIKQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVL 572
Query: 181 -KFHEGHIRSIDFHP 194
K H I ++ + P
Sbjct: 573 SKQHSSSINAVAWSP 587
>MGI|MGI:1924290 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=TAS] [GO:0000421 "autophagic vacuole membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924290 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
CTD:55054 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8 GO:GO:0000421
GO:GO:0034045 GO:GO:0000045 InterPro:IPR013923 Pfam:PF08614
EMBL:AB087879 EMBL:AB087880 EMBL:AB087881 EMBL:AK005181
EMBL:AK030983 EMBL:AK131120 EMBL:BC049122 IPI:IPI00223832
IPI:IPI00403350 IPI:IPI00554838 IPI:IPI00554885 IPI:IPI01027707
RefSeq:NP_001192320.1 RefSeq:NP_084122.2 UniGene:Mm.272972
UniGene:Mm.456099 ProteinModelPortal:Q8C0J2 SMR:Q8C0J2
DIP:DIP-31966N IntAct:Q8C0J2 MINT:MINT-136268 STRING:Q8C0J2
PhosphoSite:Q8C0J2 REPRODUCTION-2DPAGE:Q8C0J2 PaxDb:Q8C0J2
PRIDE:Q8C0J2 Ensembl:ENSMUST00000027512 Ensembl:ENSMUST00000113186
Ensembl:ENSMUST00000113190 GeneID:77040 KEGG:mmu:77040
UCSC:uc007bxl.1 UCSC:uc007bxm.1 OMA:LETECQE NextBio:346354
Bgee:Q8C0J2 CleanEx:MM_ATG16L1 Genevestigator:Q8C0J2
GermOnline:ENSMUSG00000026289 Uniprot:Q8C0J2
Length = 607
Score = 266 (98.7 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 76/251 (30%), Positives = 123/251 (49%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLW-AIGKPTALM-SLCGLSSPVDSVAFDS 68
F AH VN + + R L TGG D++V LW A G SL G ++ + S+ FDS
Sbjct: 318 FDAHDGEVNAVQFSPGS-RLLATGGMDRRVKLWEAFGDKCEFKGSLSGSNAGITSIEFDS 376
Query: 69 AEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWD 128
A +LA ++ ++W +++ ++ TLTGH + +F SG D LK+WD
Sbjct: 377 AGAYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWD 436
Query: 129 IRKKGCIHT-YKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHI 187
+R K CI T + G + N I T + V+SG FD ++ WD+ + ++ + + G I
Sbjct: 437 LRSKVCIKTVFAGSS--CNDIVCTE--QCVMSGHFDKKIRFWDIRSESVVREMELL-GKI 491
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLETFELIGS-TRPEVT-GVH--AITFHPDGRTLFS 243
++D +P L + S D +K DL T + + + P G + F PDG + +
Sbjct: 492 TALDLNPERTELLSCSRDDLLKVIDLRTNAVKQTFSAPGFKCGSDWTRVVFSPDGSYVAA 551
Query: 244 GFDDNLKVYSW 254
G + +Y W
Sbjct: 552 GSAEG-SLYVW 561
Score = 142 (55.0 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 49/195 (25%), Positives = 83/195 (42%)
Query: 6 YKLQE-FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
Y+L+ HS V R +++G D+ + LW + + ++ SS D V
Sbjct: 398 YRLRHTLTGHSGKVLSAKFLLDNAR-IVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIV 456
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
E V++G I+ WD+ +VR + TA++ +P S D L
Sbjct: 457 C---TEQCVMSGHFDKKIRFWDIRSESVVREME-LLGKITALDLNPERTELLSCSRDDLL 512
Query: 125 KIWDIRKKGCIHTYK--GHTRGINTIR--FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
K+ D+R T+ G G + R F+PDG +V +G + + VW + GK+
Sbjct: 513 KVIDLRTNAVKQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYVWSVLTGKVEKVL 572
Query: 181 -KFHEGHIRSIDFHP 194
K H I ++ + P
Sbjct: 573 SKQHSSSINAVAWAP 587
Score = 142 (55.0 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 56/246 (22%), Positives = 104/246 (42%)
Query: 16 ANVNCISIG-KKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVL 74
+N SI A +L+ +D +W + +L G S V S F ++
Sbjct: 365 SNAGITSIEFDSAGAYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIV 424
Query: 75 AGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGC 134
+G+ +KLWDL ++T+ S+C + + SG D ++ WDIR +
Sbjct: 425 SGSHDRTLKLWDLRSKVCIKTVFAG-SSCNDIVCTE--QCVMSGHFDKKIRFWDIRSESV 481
Query: 135 IHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK---FHEGHIRS-I 190
+ + + I + P+ ++S D+++KV DL + F F G + +
Sbjct: 482 VREMELLGK-ITALDLNPERTELLSCSRDDLLKVIDLRTNAVKQTFSAPGFKCGSDWTRV 540
Query: 191 DFHPLEFLLATGSADRTVKFWDLET--FELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN 248
F P +A GSA+ ++ W + T E + S + + ++A+ + P G + S D
Sbjct: 541 VFSPDGSYVAAGSAEGSLYVWSVLTGKVEKVLS-KQHSSSINAVAWAPSGLHVVS-VDKG 598
Query: 249 LKVYSW 254
+ W
Sbjct: 599 SRAVLW 604
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 264 (98.0 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 66/208 (31%), Positives = 104/208 (50%)
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
+ SV F L+ GA +I++WDL ++++ L GH+ + +++F P G+ SG
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
D +++IWD+R C T G+ T+ +PDG+ + +G D V+VWD T G L+
Sbjct: 318 DRSVRIWDLRTSQCSLTLSIED-GVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERL 376
Query: 181 KF-------HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGV-H-- 230
HE + S+ F +A+GS DRTVK W LE ST EVT + H
Sbjct: 377 DSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTC-EVTYIGHKD 435
Query: 231 ---AITFHPDGRTLFSGFDDNLKVYSWE 255
++ PD + SG D ++ W+
Sbjct: 436 FVLSVCCTPDNEYILSGSKDRGVIF-WD 462
Score = 201 (75.8 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 54/197 (27%), Positives = 90/197 (45%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L++G D+ V +W + ++L + V +VA L+ AG+ +++WD
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSLTL-SIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTG 370
Query: 91 KMVRTL-------TGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI-----RKKGCIHTY 138
+V L GH+ + +V F GE ASG +D +K+W + +K C TY
Sbjct: 371 FLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTY 430
Query: 139 KGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSI----DFHP 194
GH + ++ TPD +++SG D V WD +G L + H + S+ +
Sbjct: 431 IGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKG 490
Query: 195 LEFLLATGSADRTVKFW 211
E + ATGS D + W
Sbjct: 491 TEGIFATGSGDCKARIW 507
Score = 193 (73.0 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 57/190 (30%), Positives = 92/190 (48%)
Query: 92 MVRTLTGHKSNCTAVEFHPFGEFFASGCMDT----NLKIWDIRKKGCIHTYKGHTRGINT 147
MV +L H S V F G+F A+GC T N+ ++ K I + NT
Sbjct: 193 MVHSLD-HSSVVCCVRFSRDGKFIATGCNKTTQVFNVTTGELVAK-LIDESSNENKDDNT 250
Query: 148 -------IR---FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEF 197
IR F+PDG+ + +G D ++++WDL+ +++ + HE I S+DF P
Sbjct: 251 TASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGD 310
Query: 198 LLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEP 256
L +GS DR+V+ WDL T + + E GV + PDG+ + +G D ++V+
Sbjct: 311 RLVSGSGDRSVRIWDLRTSQCSLTLSIE-DGVTTVAVSPDGKLIAAGSLDRTVRVWDSTT 369
Query: 257 VICHDSVDMG 266
+ +D G
Sbjct: 370 GFLVERLDSG 379
Score = 163 (62.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 49/176 (27%), Positives = 89/176 (50%)
Query: 135 IHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKL---LHDFKFHEG------ 185
+H+ H+ + +RF+ DG+++ +G + +V+++T G+L L D +E
Sbjct: 194 VHSLD-HSSVVCCVRFSRDGKFIATG-CNKTTQVFNVTTGELVAKLIDESSNENKDDNTT 251
Query: 186 -----HIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
+IRS+ F P LLATG+ D+ ++ WDL T +I R ++++ F PDG
Sbjct: 252 ASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDR 311
Query: 241 LFSGFDD-NLKVYSWEPVICHD--SVDMGWSTLGDLCINDGKLLGCSFYRNSVGIW 293
L SG D +++++ C S++ G +T+ DGKL+ +V +W
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVA--VSPDGKLIAAGSLDRTVRVW 365
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 264 (98.0 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 66/208 (31%), Positives = 104/208 (50%)
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
+ SV F L+ GA +I++WDL ++++ L GH+ + +++F P G+ SG
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
D +++IWD+R C T G+ T+ +PDG+ + +G D V+VWD T G L+
Sbjct: 318 DRSVRIWDLRTSQCSLTLSIED-GVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERL 376
Query: 181 KF-------HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGV-H-- 230
HE + S+ F +A+GS DRTVK W LE ST EVT + H
Sbjct: 377 DSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTC-EVTYIGHKD 435
Query: 231 ---AITFHPDGRTLFSGFDDNLKVYSWE 255
++ PD + SG D ++ W+
Sbjct: 436 FVLSVCCTPDNEYILSGSKDRGVIF-WD 462
Score = 201 (75.8 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 54/197 (27%), Positives = 90/197 (45%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L++G D+ V +W + ++L + V +VA L+ AG+ +++WD
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSLTL-SIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTG 370
Query: 91 KMVRTL-------TGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI-----RKKGCIHTY 138
+V L GH+ + +V F GE ASG +D +K+W + +K C TY
Sbjct: 371 FLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTY 430
Query: 139 KGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSI----DFHP 194
GH + ++ TPD +++SG D V WD +G L + H + S+ +
Sbjct: 431 IGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKG 490
Query: 195 LEFLLATGSADRTVKFW 211
E + ATGS D + W
Sbjct: 491 TEGIFATGSGDCKARIW 507
Score = 193 (73.0 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 57/190 (30%), Positives = 92/190 (48%)
Query: 92 MVRTLTGHKSNCTAVEFHPFGEFFASGCMDT----NLKIWDIRKKGCIHTYKGHTRGINT 147
MV +L H S V F G+F A+GC T N+ ++ K I + NT
Sbjct: 193 MVHSLD-HSSVVCCVRFSRDGKFIATGCNKTTQVFNVTTGELVAK-LIDESSNENKDDNT 250
Query: 148 -------IR---FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEF 197
IR F+PDG+ + +G D ++++WDL+ +++ + HE I S+DF P
Sbjct: 251 TASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGD 310
Query: 198 LLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEP 256
L +GS DR+V+ WDL T + + E GV + PDG+ + +G D ++V+
Sbjct: 311 RLVSGSGDRSVRIWDLRTSQCSLTLSIE-DGVTTVAVSPDGKLIAAGSLDRTVRVWDSTT 369
Query: 257 VICHDSVDMG 266
+ +D G
Sbjct: 370 GFLVERLDSG 379
Score = 163 (62.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 49/176 (27%), Positives = 89/176 (50%)
Query: 135 IHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKL---LHDFKFHEG------ 185
+H+ H+ + +RF+ DG+++ +G + +V+++T G+L L D +E
Sbjct: 194 VHSLD-HSSVVCCVRFSRDGKFIATG-CNKTTQVFNVTTGELVAKLIDESSNENKDDNTT 251
Query: 186 -----HIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
+IRS+ F P LLATG+ D+ ++ WDL T +I R ++++ F PDG
Sbjct: 252 ASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDR 311
Query: 241 LFSGFDD-NLKVYSWEPVICHD--SVDMGWSTLGDLCINDGKLLGCSFYRNSVGIW 293
L SG D +++++ C S++ G +T+ DGKL+ +V +W
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVA--VSPDGKLIAAGSLDRTVRVW 365
>ASPGD|ASPL0000042645 [details] [associations]
symbol:AN1468 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR027106 PANTHER:PTHR19846
EMBL:AACD01000022 InterPro:IPR014906 Pfam:PF08799
HOGENOM:HOG000157615 KO:K12662 OMA:CKIWDLR OrthoDB:EOG4V1B90
RefSeq:XP_659072.1 ProteinModelPortal:Q5BDB2 SMR:Q5BDB2
STRING:Q5BDB2 EnsemblFungi:CADANIAT00008085 GeneID:2875152
KEGG:ani:AN1468.2 Uniprot:Q5BDB2
Length = 521
Score = 264 (98.0 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 58/168 (34%), Positives = 90/168 (53%)
Query: 56 GLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFF 115
G + P +V+ +SA V ++G G + LW L++ + + TL GH EFHP G++
Sbjct: 250 GATLPESNVS-ESA-VNFVSGGGEGNVCLWSLDKDQPLATLEGHSGRVCRTEFHPSGKYI 307
Query: 116 ASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGK 175
AS DT ++WD+ + +GH+R + T+ F DG + SGG D++ +VWDL G+
Sbjct: 308 ASASYDTTWRLWDVETTAELQLQEGHSREVYTVAFNNDGSLLASGGLDSIGRVWDLRTGR 367
Query: 176 LLHDFKFHEGHIRSI---DFHPLEFLLATGSADRTVKFWDLETFELIG 220
+ EGHIR I D+ + + +GS D VK WDL + G
Sbjct: 368 TV---MILEGHIREIFGLDWGVDGYRVLSGSGDGWVKCWDLRQVKNTG 412
Score = 201 (75.8 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 76/278 (27%), Positives = 120/278 (43%)
Query: 22 SIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGV 81
++ + A F ++GG + V LW++ K L +L G S V F + + + +
Sbjct: 257 NVSESAVNF-VSGGGEGNVCLWSLDKDQPLATLEGHSGRVCRTEFHPSGKYIASASYDTT 315
Query: 82 IKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGH 141
+LWD+E + ++ GH V F+ G ASG +D+ ++WD+R + +GH
Sbjct: 316 WRLWDVETTAELQLQEGHSREVYTVAFNNDGSLLASGGLDSIGRVWDLRTGRTVMILEGH 375
Query: 142 TRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLAT 201
R I + + DG V+SG D VK WDL K H+ + + ++
Sbjct: 376 IREIFGLDWGVDGYRVLSGSGDGWVKCWDLRQVKNTGGIGAHKSVVSDVRWYK------- 428
Query: 202 GSADRTVKFWDLETFELIGST-RPEVTGVHAITFHPDGRTLF--SGFDDNLKVYS---WE 255
GS + F L T E G R +V G A T F SGFD N+ ++S W
Sbjct: 429 GS--ESASF--LPTTE--GQPGRMDVDGATAPVQPRKSGTFFVSSGFDKNVNIFSADDWS 482
Query: 256 PVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIW 293
+I S G D+ N + C R +V +W
Sbjct: 483 -LIKTLSGHSGNVLSADISNNAQWIASCGHDR-TVKLW 518
Score = 135 (52.6 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 54/208 (25%), Positives = 85/208 (40%)
Query: 7 KLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAF 66
+LQE HS V ++ L +GG D +W + +M L G + + +
Sbjct: 328 QLQE--GHSREVYTVAFNNDGS-LLASGGLDSIGRVWDLRTGRTVMILEGHIREIFGLDW 384
Query: 67 DSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKI 126
VL+G+ G +K WDL + K + HKS + V ++ G AS T
Sbjct: 385 GVDGYRVLSGSGDGWVKCWDLRQVKNTGGIGAHKSVVSDVRWYK-GSESASFLPTTE--- 440
Query: 127 WDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGH 186
+ G + G T + + G + VS GFD V ++ L+ H G+
Sbjct: 441 ---GQPGRMDV-DGATAPVQPRK---SGTFFVSSGFDKNVNIFSADDWSLIKTLSGHSGN 493
Query: 187 IRSIDFHPLEFLLATGSADRTVKFWDLE 214
+ S D +A+ DRTVK W +E
Sbjct: 494 VLSADISNNAQWIASCGHDRTVKLWGIE 521
Score = 124 (48.7 bits), Expect = 0.00050, P = 0.00050
Identities = 39/153 (25%), Positives = 65/153 (42%)
Query: 108 FHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRW----------- 156
F P G+ A+G +++ + + KGHT + + + P
Sbjct: 205 FAPDGQTIATGNWGGGIRLLGVPNLEEKLSVKGHTDRVGGLSWFPGATLPESNVSESAVN 264
Query: 157 VVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETF 216
VSGG + V +W L + L + H G + +FHP +A+ S D T + WD+ET
Sbjct: 265 FVSGGGEGNVCLWSLDKDQPLATLEGHSGRVCRTEFHPSGKYIASASYDTTWRLWDVETT 324
Query: 217 ELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNL 249
+ V+ + F+ DG L SG D++
Sbjct: 325 AELQLQEGHSREVYTVAFNNDGSLLASGGLDSI 357
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 254 (94.5 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 60/218 (27%), Positives = 104/218 (47%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G +++ ++ H +N + I K+ L++ DD + +W + A+ L P+ +V
Sbjct: 141 GQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGTMGIWDPRQKEAIDYL-ETELPITAV 199
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
A A V +G I +WD+ + +V ++ GH T++E P + S D+ +
Sbjct: 200 AQSEAGNEVFSGGIDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTV 259
Query: 125 KIWDIRK----KGCIHTYKGHTRGI--NTIR--FTPDGRWVVSGGFDNVVKVWDLTAGKL 176
+ WDIR I TY G G+ N IR + P G + +G D V VWD GK+
Sbjct: 260 RTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRASWNPAGDKIAAGSGDRSVVVWDFKTGKI 319
Query: 177 LHDFKFHEGHIRSIDFHPL-EFLLATGSADRTVKFWDL 213
L+ H+G + + F P E ++ + S+DR + +L
Sbjct: 320 LYKLPGHKGTVNDVRFTPNNEPIIVSASSDRNLMLGEL 357
Score = 189 (71.6 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 51/230 (22%), Positives = 101/230 (43%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDS-AEVLVLAGASTGVIKLWDLEE 89
+ + D + W I + G ++SV + ++++ + G + +WD +
Sbjct: 124 IFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGTMGIWDPRQ 183
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
+ + L TAV G SG +D + +WDIRKK +++ GH I ++
Sbjct: 184 KEAIDYLETELP-ITAVAQSEAGNEVFSGGIDNAIHVWDIRKKAIVYSMAGHMDTITSLE 242
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTA-GKLLHDFKFHEG-------HIRSIDFHPLEFLLAT 201
+PD + ++S FD+ V+ WD+ + ++G ++ ++P +A
Sbjct: 243 VSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRASWNPAGDKIAA 302
Query: 202 GSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLF--SGFDDNL 249
GS DR+V WD +T +++ V+ + F P+ + + D NL
Sbjct: 303 GSGDRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNNEPIIVSASSDRNL 352
Score = 188 (71.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 77/302 (25%), Positives = 131/302 (43%)
Query: 93 VRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTY---KGHTRGINTIR 149
+ LTGH AV F P + ASG MD ++ +W+ G Y GH I ++
Sbjct: 59 IMELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTY--GQCENYGILSGHKGAILDLQ 116
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL-EFLLATGSADRTV 208
++ D + + S D + WD+ +G+ + + HE I S++ + +L + S D T+
Sbjct: 117 WSRDSKTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGTM 176
Query: 209 KFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE---PVICHDSVDM 265
WD E I E+ + A+ G +FSG DN ++ W+ I + S+
Sbjct: 177 GIWDPRQKEAIDYLETELP-ITAVAQSEAGNEVFSGGIDNA-IHVWDIRKKAIVY-SMAG 233
Query: 266 GWSTLGDLCIN-DGKLLGCSFYRNSVGIW----VADVS-HVEPYGVGAPEPDQSICTEVK 319
T+ L ++ D + L + + ++V W A + H+ Y GAP +
Sbjct: 234 HMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYD-GAPVGLEKNLIRAS 292
Query: 320 FNPPGSHSLEKVGIIGRSTSGFRSTSPDYETKDIKTIYVDSTGGKPVASQ-KIGPLNSPK 378
+NP G +K+ + SG RS ++ K K +Y G K + + P N P
Sbjct: 293 WNPAG----DKIA----AGSGDRSVVV-WDFKTGKILY-KLPGHKGTVNDVRFTPNNEPI 342
Query: 379 VV 380
+V
Sbjct: 343 IV 344
Score = 169 (64.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 51/214 (23%), Positives = 90/214 (42%)
Query: 46 GKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE-ESKMVRTLTGHKSNCT 104
G +M L G S V +V FD + +G+ I LW+ + + L+GHK
Sbjct: 54 GLNAPIMELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTYGQCENYGILSGHKGAIL 113
Query: 105 AVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR-WVVSGGFD 163
+++ + S D L WDI I Y GH IN++ + G+ +VS D
Sbjct: 114 DLQWSRDSKTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDD 173
Query: 164 NVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTR 223
+ +WD + + D+ E I ++ + +G D + WD+ ++ S
Sbjct: 174 GTMGIWDPRQKEAI-DYLETELPITAVAQSEAGNEVFSGGIDNAIHVWDIRKKAIVYSMA 232
Query: 224 PEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEP 256
+ + ++ PD +TL S FD ++ + P
Sbjct: 233 GHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRP 266
>UNIPROTKB|G4MXN3 [details] [associations]
symbol:MGG_01259 "Pre-mRNA splicing factor" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 KO:K12662 RefSeq:XP_003714171.1
ProteinModelPortal:G4MXN3 EnsemblFungi:MGG_01259T0 GeneID:2679643
KEGG:mgr:MGG_01259 Uniprot:G4MXN3
Length = 531
Score = 264 (98.0 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 60/198 (30%), Positives = 98/198 (49%)
Query: 37 DQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLA-GASTGVIKLWDLEESKMVRT 95
D+ +NL G + +C + SAE + LA G + G + LW L + + T
Sbjct: 239 DETMNLR--GHTNKVSGMCWFPGATLQESNVSAESVNLATGGAEGQVNLWSLSQDTPLAT 296
Query: 96 LTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR 155
L+GH V+FHP G F AS DT+ ++WD+ K+ + +GH+RG+ + F DG
Sbjct: 297 LSGHTQRVCRVDFHPSGRFLASASEDTSWRLWDVEKRTELLLQEGHSRGVFAVSFNGDGS 356
Query: 156 WVVSGGFDNVVKVWDLTAGKLLHDFKFH-EGHIRSI---DFHPLEFLLATGSADRTVKFW 211
+ S G D++ ++WDL G+ + H +GHI+ I D+ + + SAD +K W
Sbjct: 357 LLASAGQDSIGRIWDLRTGRTIMILDGHMDGHIKPIYALDWGSDGHRVLSASADGWIKCW 416
Query: 212 DLETFELIGSTRPEVTGV 229
D+ + G + V
Sbjct: 417 DVRKVQRTGGVGAHTSAV 434
Score = 180 (68.4 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 49/146 (33%), Positives = 69/146 (47%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFD-SAEVLVLAGASTGVIKLWDLEE 89
L TGG + +VNLW++ + T L +L G + V V F S L A T +LWD+E+
Sbjct: 274 LATGGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLASASEDTSW-RLWDVEK 332
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRG----I 145
+ GH AV F+ G AS D+ +IWD+R I GH G I
Sbjct: 333 RTELLLQEGHSRGVFAVSFNGDGSLLASAGQDSIGRIWDLRTGRTIMILDGHMDGHIKPI 392
Query: 146 NTIRFTPDGRWVVSGGFDNVVKVWDL 171
+ + DG V+S D +K WD+
Sbjct: 393 YALDWGSDGHRVLSASADGWIKCWDV 418
Score = 134 (52.2 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 45/201 (22%), Positives = 81/201 (40%)
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEF-----------FASGCMD 121
V G G +KL+ + L GH + + + + P A+G +
Sbjct: 221 VATGNWGGQVKLFSIPNLDETMNLRGHTNKVSGMCWFPGATLQESNVSAESVNLATGGAE 280
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+ +W + + + T GHT+ + + F P GR++ S D ++WD+ +
Sbjct: 281 GQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLASASEDTSWRLWDVEKRT---ELL 337
Query: 182 FHEGHIR---SIDFHPLEFLLATGSADRTVKFWDLETFELI----GSTRPEVTGVHAITF 234
EGH R ++ F+ LLA+ D + WDL T I G + ++A+ +
Sbjct: 338 LQEGHSRGVFAVSFNGDGSLLASAGQDSIGRIWDLRTGRTIMILDGHMDGHIKPIYALDW 397
Query: 235 HPDGRTLFSGFDDNLKVYSWE 255
DG + S D + W+
Sbjct: 398 GSDGHRVLSASADGW-IKCWD 417
Score = 128 (50.1 bits), Expect = 0.00019, P = 0.00019
Identities = 39/164 (23%), Positives = 68/164 (41%)
Query: 97 TGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRW 156
T + + + P GE A+G +K++ I +GHT ++ + + P
Sbjct: 203 TAGQRHISITRISPNGETVATGNWGGQVKLFSIPNLDETMNLRGHTNKVSGMCWFPGATL 262
Query: 157 -----------VVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSAD 205
+ +GG + V +W L+ L H + +DFHP LA+ S D
Sbjct: 263 QESNVSAESVNLATGGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLASASED 322
Query: 206 RTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNL 249
+ + WD+E + GV A++F+ DG L S D++
Sbjct: 323 TSWRLWDVEKRTELLLQEGHSRGVFAVSFNGDGSLLASAGQDSI 366
Score = 127 (49.8 bits), Expect = 0.00024, P = 0.00024
Identities = 57/229 (24%), Positives = 94/229 (41%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
RFL + +D LW + K T L+ G S V +V+F+ L+ + + ++WDL
Sbjct: 314 RFLASASEDTSWRLWDVEKRTELLLQEGHSRGVFAVSFNGDGSLLASAGQDSIGRIWDLR 373
Query: 89 ESKMVRTLTGHKSN----CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRG 144
+ + L GH A+++ G S D +K WD+RK HT
Sbjct: 374 TGRTIMILDGHMDGHIKPIYALDWGSDGHRVLSASADGWIKCWDVRKVQRTGGVGAHTSA 433
Query: 145 INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSA 204
++ D RW G D L L D K G +++ FL+++G
Sbjct: 434 VS------DMRWFK--GLDG-----PLDGVPLGVDEK---G--QAMPKKSGTFLVSSGF- 474
Query: 205 DRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVY 252
D V + + + L+ S V ++ DGR + SG D +K++
Sbjct: 475 DHKVNIYSADDWALVQSLSGHTGPVASVDVSRDGRWIVSGGHDRTVKLW 523
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 243 (90.6 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 64/244 (26%), Positives = 109/244 (44%)
Query: 19 NCISIGKKACR---FLITGGDDQKVNLWAIGKPTALM---SLCGLSSPVDSVAFDSAEVL 72
N KK R FL+TGG D V +W + + L L G + V SVA S
Sbjct: 40 NPFDFDKKEARPKDFLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQT 99
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
+ + + + LWD L+ + V+F P ++ SG D + ++ +
Sbjct: 100 IASSSLDSTMCLWDARSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETG 159
Query: 133 GCIHTYKGHTRGIN-TIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSID 191
T +I ++PDG+++ SG D ++ ++D+ AGK++ + H +RS+
Sbjct: 160 KAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLC 219
Query: 192 FHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKV 251
F P LL T S D +K +D+ +++G+ + V + F DG+ S DN V
Sbjct: 220 FSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDN-SV 278
Query: 252 YSWE 255
W+
Sbjct: 279 KIWD 282
Score = 225 (84.3 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 46/184 (25%), Positives = 94/184 (51%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD-SVAFDSAEVLVLAGASTGVIKLWDL 87
+++I+G +D K++++++ A +L + S+A+ + +GA G+I ++D+
Sbjct: 140 KYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFDV 199
Query: 88 EESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINT 147
K+V+TL GH ++ F P + + D ++K++D+ + T GH +
Sbjct: 200 AAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLC 259
Query: 148 IRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRT 207
+ F+ DG+ S DN VK+WD + K LH F H + + + P +A+ S D++
Sbjct: 260 VAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDKVASASEDKS 319
Query: 208 VKFW 211
+ +
Sbjct: 320 LNIY 323
Score = 205 (77.2 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 74/299 (24%), Positives = 129/299 (43%)
Query: 42 LWAI--GKPTALMSLC-GLSSPVDS-VAFDSAEV----LVLAGASTGVIKLWDLEES--- 90
LWA G+ TA + P ++ FD E ++ G ++K+WDL+E
Sbjct: 16 LWACTWGRDTAASDPDDAVVEPEENPFDFDKKEARPKDFLVTGGLDDLVKVWDLQEDNTL 75
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
K+ L GH +V G+ AS +D+ + +WD R H + T++F
Sbjct: 76 KLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVDLWTVQF 135
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEG-HIRSIDFHPLEFLLATGSADRTVK 209
+P ++V+SG D + ++ + GK G + SI + P +A+G+ D +
Sbjct: 136 SPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIIT 195
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD-NLKVYSWEPVICHDSV--DMG 266
+D+ +++ + V ++ F P+ + L + DD ++K+Y + H V +
Sbjct: 196 IFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYD----VTHSDVVGTLS 251
Query: 267 WSTLGDLCI---NDGKLLGCSFYRNSVGIWVADVSHVEPYGVGAPEPDQSICTEVKFNP 322
LC+ DGK S NSV IW D S + A DQ V+++P
Sbjct: 252 GHASWVLCVAFSEDGKHFASSSSDNSVKIW--DTSERKCLHTFAEHTDQ--VWGVRYSP 306
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 252 (93.8 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 61/218 (27%), Positives = 103/218 (47%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G +++ +V H +N + I K+ L +G DD + +W K A PV +V
Sbjct: 135 GERIRRYVGHEEVINSLDISKRGEEILFSGSDDGTIGIWDPRKKHAA-DYIESDFPVTAV 193
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
A A + +G IK+WD+ + +V + GH+ T ++ P + S MD+
Sbjct: 194 AISEAGNEIYSGGIDNDIKVWDVRKKAVVYNMAGHRDTITTLKVSPDSQSLLSYAMDSTA 253
Query: 125 KIWDIRK----KGCIHTYKGHTRGI--NTIR--FTPDGRWVVSGGFDNVVKVWDLTAGKL 176
+ WDIR + I T+ G GI N +R + +G+ V G D V +W GKL
Sbjct: 254 RTWDIRPFAPTERHIRTFDGAPMGIEKNLVRGGWDKEGKRVAMGAADGTVVIWSNETGKL 313
Query: 177 LHDFKFHEGHIRSIDFHP-LEFLLATGSADRTVKFWDL 213
+ H+ + ++F P E L+ +GS+D+T+ +L
Sbjct: 314 TYKLPGHKAAVNCVEFSPGTEPLILSGSSDKTLLVGEL 351
Score = 189 (71.6 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 58/233 (24%), Positives = 94/233 (40%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDS-AEVLVLAGASTGVIKLWDLEE 89
+ + D + W + + G ++S+ E ++ +G+ G I +WD
Sbjct: 118 IFSASADMHLASWDLTTGERIRRYVGHEEVINSLDISKRGEEILFSGSDDGTIGIWD-PR 176
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
K TAV G SG +D ++K+WD+RKK ++ GH I T++
Sbjct: 177 KKHAADYIESDFPVTAVAISEAGNEIYSGGIDNDIKVWDVRKKAVVYNMAGHRDTITTLK 236
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEF------------ 197
+PD + ++S D+ + WD+ F E HIR+ D P+
Sbjct: 237 VSPDSQSLLSYAMDSTARTWDI------RPFAPTERHIRTFDGAPMGIEKNLVRGGWDKE 290
Query: 198 --LLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLF-SGFDD 247
+A G+AD TV W ET +L V+ + F P L SG D
Sbjct: 291 GKRVAMGAADGTVVIWSNETGKLTYKLPGHKAAVNCVEFSPGTEPLILSGSSD 343
Score = 150 (57.9 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 45/209 (21%), Positives = 85/209 (40%)
Query: 51 LMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE-ESKMVRTLTGHKSNCTAVEFH 109
LM L G S + F+SA + +G+ I LW + + L+GH+ +++
Sbjct: 53 LMELSGHSGEIFCAKFNSAGQYIASGSMDRSILLWRANGDCENYGILSGHRGAILDLQWS 112
Query: 110 PFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVV-SGGFDNVVKV 168
+ S D +L WD+ I Y GH IN++ + G ++ SG D + +
Sbjct: 113 RDSDIIFSASADMHLASWDLTTGERIRRYVGHEEVINSLDISKRGEEILFSGSDDGTIGI 172
Query: 169 WDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTG 228
WD K D+ + + ++ + +G D +K WD+ ++ +
Sbjct: 173 WD-PRKKHAADYIESDFPVTAVAISEAGNEIYSGGIDNDIKVWDVRKKAVVYNMAGHRDT 231
Query: 229 VHAITFHPDGRTLFS-GFDDNLKVYSWEP 256
+ + PD ++L S D + + P
Sbjct: 232 ITTLKVSPDSQSLLSYAMDSTARTWDIRP 260
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 266 (98.7 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 65/228 (28%), Positives = 110/228 (48%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
++L +G D + +W + K + +L G PV +V + + + +G+S IK+WDL+
Sbjct: 513 QYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLN--DKYLFSGSSDKTIKVWDLK 570
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ TL H + G++ SG D +K+WD++ C +T KGHT+ + TI
Sbjct: 571 TLECKYTLESHARAVKTLCIS--GQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTI 628
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL-EFLLATGSADRT 207
G + SG +D ++VW+L K L GH R ++ + + LL T S D T
Sbjct: 629 CIL--GTNLYSGSYDKTIRVWNL---KSLECSATLRGHDRWVEHMVICDKLLFTASDDNT 683
Query: 208 VKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS-GFDDNLKVYSW 254
+K WDLET + V + D + + S D +++V+ W
Sbjct: 684 IKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVWGW 731
Score = 201 (75.8 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 52/212 (24%), Positives = 107/212 (50%)
Query: 86 DLEESKMVRTLTG-HKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG--CIHTYKGHT 142
+LE K++ T+ G H ++ + +GC D +++++D + + C+ T KGH
Sbjct: 447 NLETIKLIETIKGYHVTSHLCI----CDNLLFTGCSDNSIRVYDYKSQNMECVQTLKGHE 502
Query: 143 RGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATG 202
+ +I + + +++ SG D+ +KVWDL + + + H+ + ++ + ++L + G
Sbjct: 503 GPVESICY--NDQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLND-KYLFS-G 558
Query: 203 SADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN-LKVYSWEPVICHD 261
S+D+T+K WDL+T E + V + G+ LFSG +D +KV+ + C+
Sbjct: 559 SSDKTIKVWDLKTLECKYTLESHARAVKTLCI--SGQYLFSGSNDKTIKVWDLKTFRCNY 616
Query: 262 SVDMGWSTLGDLCINDGKLLGCSFYRNSVGIW 293
++ + +CI L S Y ++ +W
Sbjct: 617 TLKGHTKWVTTICILGTNLYSGS-YDKTIRVW 647
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 265 (98.3 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 55/211 (26%), Positives = 102/211 (48%)
Query: 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
+R Y L + HS V + F+++ D + LW+ L+ G + PV
Sbjct: 408 RRSYTL--LLGHSGPVYSATFSPPG-DFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVW 464
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
F + + ++W ++ + +R + GH S+ V++HP + A+G D
Sbjct: 465 DAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDK 524
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
+++WD++ C+ + GH + ++ +PDGR++ SG D + +WDL+ + +
Sbjct: 525 TVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMG 584
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWDL 213
H + S+ + LLA+GSAD TVK WD+
Sbjct: 585 HNSCVWSLSYSGEGSLLASGSADCTVKLWDV 615
Score = 235 (87.8 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 59/233 (25%), Positives = 104/233 (44%)
Query: 23 IGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVI 82
IG+ L D ++ G+ + + L G S PV S F VL+ ++ I
Sbjct: 384 IGQAGSGALQAENDSSDQSIGPNGRRSYTL-LLGHSGPVYSATFSPPGDFVLSSSADTTI 442
Query: 83 KLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHT 142
+LW + + + GH +F PFG +FAS D +IW + + + GH
Sbjct: 443 RLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHL 502
Query: 143 RGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATG 202
++ +++ P+ ++ +G D V++WD+ G+ + F H + S+ P +A+G
Sbjct: 503 SDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASG 562
Query: 203 SADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
D T+ WDL T I + V ++++ +G L SG D V W+
Sbjct: 563 DEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSAD-CTVKLWD 614
Score = 202 (76.2 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 44/161 (27%), Positives = 79/161 (49%)
Query: 37 DQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTL 96
D+ +W++ + L + G S VD V + + G+S ++LWD++ + VR
Sbjct: 481 DRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIF 540
Query: 97 TGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRW 156
GH+S ++ P G + ASG D + +WD+ CI GH + ++ ++ +G
Sbjct: 541 IGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSL 600
Query: 157 VVSGGFDNVVKVWDLTAGKLLHDFKFHEGH---IRSIDFHP 194
+ SG D VK+WD+T+ L + G+ +RS+ P
Sbjct: 601 LASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFP 641
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 258 (95.9 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 57/195 (29%), Positives = 93/195 (47%)
Query: 43 WAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSN 102
W I +P +L G SPV V F ++++ + IK+WD E RTL GH +
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 103 CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGF 162
+ F G+ AS D +K+WD + CI T GH ++++ P+G +VS
Sbjct: 153 VQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 163 DNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGST 222
D +K+W++ G + F H +R + + L+A+ S D+TV+ W + T E
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 223 RPEVTGVHAITFHPD 237
R V I++ P+
Sbjct: 273 REHEHVVECISWAPE 287
Score = 214 (80.4 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 41/164 (25%), Positives = 79/164 (48%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++ +D + +W +L G + V ++FD L+ + ++ IKLWD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGF 182
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ +RT+ GH N ++V P G+ S D +K+W+++ C+ T+ GH + +R
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHP 194
DG + S D V+VW + + + + HE + I + P
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 194 (73.4 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 43/159 (27%), Positives = 72/159 (45%)
Query: 96 LTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR 155
L+GH+S T V FHP S D +K+WD T KGHT + I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 156 WVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET 215
+ S D +K+WD + + H+ ++ S+ P + + S D+T+K W+++T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 216 FELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSW 254
+ + V + + DG TL + ++ V W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 261
Score = 185 (70.2 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 34/101 (33%), Positives = 52/101 (51%)
Query: 112 GEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDL 171
G F SG D +K+WDI C+ T GH + + F G++++S D ++VWD
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDF 367
Query: 172 TAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
+ + HE + S+DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 179 (68.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
+L+G+ IK+WD+ + TL GH + V FH G+F S D L++WD + K
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNK 370
Query: 133 GCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
C+ T H + ++ F +VV+G D VKVW+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 165 (63.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 29/101 (28%), Positives = 55/101 (54%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
FL++G D+ + +W I LM+L G + V V F S +L+ A +++WD +
Sbjct: 310 FLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKN 369
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
+ ++TL H+ T+++FH + +G +D +K+W+ R
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 152 (58.6 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 43/161 (26%), Positives = 68/161 (42%)
Query: 136 HTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL 195
+ GH + + F P +VS D +KVWD G K H ++ I F
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHT 161
Query: 196 EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSW 254
LLA+ SAD T+K WD + FE I + V ++ P+G + S D +K++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 255 EPVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWV 294
+ C + + + N DG L+ +V +WV
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Score = 120 (47.3 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 30/114 (26%), Positives = 55/114 (48%)
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL-EFLLATG 202
G T + G +++SG D +K+WD++ G L H+ +R + FH +F+L+
Sbjct: 298 GSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA 357
Query: 203 SADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWE 255
D+T++ WD + + + V ++ FH + +G D +KV WE
Sbjct: 358 D-DKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
Score = 120 (47.3 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 32/143 (22%), Positives = 60/143 (41%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H+ +V IS + L + D + LW + ++ G V SVA +
Sbjct: 149 HTDSVQDISFDHTG-KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
++ + IK+W+++ V+T TGH+ V + G AS D +++W + K
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 134 CIHTYKGHTRGINTIRFTPDGRW 156
C + H + I + P+ +
Sbjct: 268 CKAELREHEHVVECISWAPESSY 290
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 258 (95.9 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 57/195 (29%), Positives = 93/195 (47%)
Query: 43 WAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSN 102
W I +P +L G SPV V F ++++ + IK+WD E RTL GH +
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 103 CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGF 162
+ F G+ AS D +K+WD + CI T GH ++++ P+G +VS
Sbjct: 153 VEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 163 DNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGST 222
D +K+W++ G + F H +R + + L+A+ S D+TV+ W + T E
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 223 RPEVTGVHAITFHPD 237
R V I++ P+
Sbjct: 273 REHEHVVECISWAPE 287
Score = 217 (81.4 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 41/164 (25%), Positives = 81/164 (49%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++ +D + +W +L G + V+ ++FD + L+ + ++ IKLWD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ +RT+ GH N ++V P G+ S D +K+W+++ C+ T+ GH + +R
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHP 194
DG + S D V+VW + + + + HE + I + P
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 195 (73.7 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 43/159 (27%), Positives = 72/159 (45%)
Query: 96 LTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR 155
L+GH+S T V FHP S D +K+WD T KGHT + I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGK 163
Query: 156 WVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET 215
+ S D +K+WD + + H+ ++ S+ P + + S D+T+K W+++T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 216 FELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSW 254
+ + V + + DG TL + ++ V W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 261
Score = 183 (69.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 112 GEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDL 171
G F SG D +K+WD+ C+ T GH + + F G++++S D ++VWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 172 TAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
+ + HE + S+DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 177 (67.4 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
+L+G+ IK+WD+ + TL GH + V FH G+F S D L++WD + K
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 133 GCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
C+ T H + ++ F +VV+G D VKVW+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 163 (62.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 28/101 (27%), Positives = 55/101 (54%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
FL++G D+ + +W + LM+L G + V V F S +L+ A +++WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
+ ++TL H+ T+++FH + +G +D +K+W+ R
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 150 (57.9 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 43/161 (26%), Positives = 67/161 (41%)
Query: 136 HTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL 195
+ GH + + F P +VS D +KVWD G K H + I F
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHS 161
Query: 196 EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSW 254
LLA+ SAD T+K WD + FE I + V ++ P+G + S D +K++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 255 EPVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWV 294
+ C + + + N DG L+ +V +WV
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Score = 121 (47.7 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 32/143 (22%), Positives = 60/143 (41%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H+ +V IS + L + D + LW + ++ G V SVA +
Sbjct: 149 HTDSVEDISFDHSG-KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
++ + IK+W+++ V+T TGH+ V + G AS D +++W + K
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 134 CIHTYKGHTRGINTIRFTPDGRW 156
C + H + I + P+ +
Sbjct: 268 CKAELREHEHVVECISWAPESSY 290
Score = 118 (46.6 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 30/114 (26%), Positives = 55/114 (48%)
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL-EFLLATG 202
G T + G +++SG D +K+WD++ G L H+ +R + FH +F+L+
Sbjct: 298 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA 357
Query: 203 SADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWE 255
D+T++ WD + + + V ++ FH + +G D +KV WE
Sbjct: 358 D-DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 258 (95.9 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 57/195 (29%), Positives = 93/195 (47%)
Query: 43 WAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSN 102
W I +P +L G SPV V F ++++ + IK+WD E RTL GH +
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 103 CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGF 162
+ F G+ AS D +K+WD + CI T GH ++++ P+G +VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAAR 212
Query: 163 DNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGST 222
D +K+W++ G + F H +R + + L+A+ S D+TV+ W + T E
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 223 RPEVTGVHAITFHPD 237
R V I++ P+
Sbjct: 273 REHEHVVECISWAPE 287
Score = 216 (81.1 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 41/164 (25%), Positives = 80/164 (48%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++ +D + +W +L G + V ++FD + L+ + ++ IKLWD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ +RT+ GH N ++V P G+ S D +K+W+++ C+ T+ GH + +R
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHP 194
DG + S D V+VW + + + + HE + I + P
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 192 (72.6 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 42/159 (26%), Positives = 72/159 (45%)
Query: 96 LTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR 155
L+GH+S T V FHP S D +K+WD T KGHT + I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 156 WVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET 215
+ S D +K+WD + + H+ ++ S+ P + + + D+T+K W+++T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQT 223
Query: 216 FELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSW 254
+ + V + + DG TL + ++ V W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 261
Score = 183 (69.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 112 GEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDL 171
G F SG D +K+WD+ C+ T GH + + F G++++S D ++VWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 172 TAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
+ + HE + S+DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 177 (67.4 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
+L+G+ IK+WD+ + TL GH + V FH G+F S D L++WD + K
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 133 GCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
C+ T H + ++ F +VV+G D VKVW+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 163 (62.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 28/101 (27%), Positives = 55/101 (54%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
FL++G D+ + +W + LM+L G + V V F S +L+ A +++WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
+ ++TL H+ T+++FH + +G +D +K+W+ R
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 151 (58.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 43/161 (26%), Positives = 68/161 (42%)
Query: 136 HTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL 195
+ GH + + F P +VS D +KVWD G K H ++ I F
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 196 EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSW 254
LLA+ SAD T+K WD + FE I + V ++ P+G + S D +K++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEV 221
Query: 255 EPVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWV 294
+ C + + + N DG L+ +V +WV
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Score = 124 (48.7 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 33/143 (23%), Positives = 60/143 (41%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H+ +V IS + L + D + LW + ++ G V SVA +
Sbjct: 149 HTDSVQDISFDHSG-KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
++ A IK+W+++ V+T TGH+ V + G AS D +++W + K
Sbjct: 208 VSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 134 CIHTYKGHTRGINTIRFTPDGRW 156
C + H + I + P+ +
Sbjct: 268 CKAELREHEHVVECISWAPESSY 290
Score = 118 (46.6 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 30/114 (26%), Positives = 55/114 (48%)
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL-EFLLATG 202
G T + G +++SG D +K+WD++ G L H+ +R + FH +F+L+
Sbjct: 298 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA 357
Query: 203 SADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWE 255
D+T++ WD + + + V ++ FH + +G D +KV WE
Sbjct: 358 D-DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 258 (95.9 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 57/195 (29%), Positives = 93/195 (47%)
Query: 43 WAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSN 102
W I +P +L G SPV V F ++++ + IK+WD E RTL GH +
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 103 CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGF 162
+ F G+ AS D +K+WD + CI T GH ++++ P+G +VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 163 DNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGST 222
D +K+W++ G + F H +R + + L+A+ S D+TV+ W + T E
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 223 RPEVTGVHAITFHPD 237
R V I++ P+
Sbjct: 273 REHEHVVECISWAPE 287
Score = 215 (80.7 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 41/164 (25%), Positives = 80/164 (48%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++ +D + +W +L G + V ++FD + L+ + ++ IKLWD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ +RT+ GH N ++V P G+ S D +K+W+++ C+ T+ GH + +R
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHP 194
DG + S D V+VW + + + + HE + I + P
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 195 (73.7 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 43/159 (27%), Positives = 72/159 (45%)
Query: 96 LTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR 155
L+GH+S T V FHP S D +K+WD T KGHT + I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 156 WVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET 215
+ S D +K+WD + + H+ ++ S+ P + + S D+T+K W+++T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 216 FELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSW 254
+ + V + + DG TL + ++ V W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 261
Score = 183 (69.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 112 GEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDL 171
G F SG D +K+WD+ C+ T GH + + F G++++S D ++VWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 172 TAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
+ + HE + S+DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 177 (67.4 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
+L+G+ IK+WD+ + TL GH + V FH G+F S D L++WD + K
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 133 GCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
C+ T H + ++ F +VV+G D VKVW+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 163 (62.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 28/101 (27%), Positives = 55/101 (54%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
FL++G D+ + +W + LM+L G + V V F S +L+ A +++WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
+ ++TL H+ T+++FH + +G +D +K+W+ R
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 151 (58.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 43/161 (26%), Positives = 68/161 (42%)
Query: 136 HTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL 195
+ GH + + F P +VS D +KVWD G K H ++ I F
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 196 EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSW 254
LLA+ SAD T+K WD + FE I + V ++ P+G + S D +K++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 255 EPVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWV 294
+ C + + + N DG L+ +V +WV
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Score = 121 (47.7 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 32/143 (22%), Positives = 60/143 (41%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H+ +V IS + L + D + LW + ++ G V SVA +
Sbjct: 149 HTDSVQDISFDHSG-KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
++ + IK+W+++ V+T TGH+ V + G AS D +++W + K
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 134 CIHTYKGHTRGINTIRFTPDGRW 156
C + H + I + P+ +
Sbjct: 268 CKAELREHEHVVECISWAPESSY 290
Score = 118 (46.6 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 30/114 (26%), Positives = 55/114 (48%)
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL-EFLLATG 202
G T + G +++SG D +K+WD++ G L H+ +R + FH +F+L+
Sbjct: 298 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA 357
Query: 203 SADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWE 255
D+T++ WD + + + V ++ FH + +G D +KV WE
Sbjct: 358 D-DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 258 (95.9 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 57/195 (29%), Positives = 93/195 (47%)
Query: 43 WAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSN 102
W I +P +L G SPV V F ++++ + IK+WD E RTL GH +
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 103 CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGF 162
+ F G+ AS D +K+WD + CI T GH ++++ P+G +VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 163 DNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGST 222
D +K+W++ G + F H +R + + L+A+ S D+TV+ W + T E
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 223 RPEVTGVHAITFHPD 237
R V I++ P+
Sbjct: 273 REHEHVVECISWAPE 287
Score = 215 (80.7 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 41/164 (25%), Positives = 80/164 (48%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++ +D + +W +L G + V ++FD + L+ + ++ IKLWD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ +RT+ GH N ++V P G+ S D +K+W+++ C+ T+ GH + +R
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHP 194
DG + S D V+VW + + + + HE + I + P
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 195 (73.7 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 43/159 (27%), Positives = 72/159 (45%)
Query: 96 LTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR 155
L+GH+S T V FHP S D +K+WD T KGHT + I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 156 WVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET 215
+ S D +K+WD + + H+ ++ S+ P + + S D+T+K W+++T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 216 FELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSW 254
+ + V + + DG TL + ++ V W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 261
Score = 183 (69.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 112 GEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDL 171
G F SG D +K+WD+ C+ T GH + + F G++++S D ++VWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 172 TAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
+ + HE + S+DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 177 (67.4 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
+L+G+ IK+WD+ + TL GH + V FH G+F S D L++WD + K
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 133 GCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
C+ T H + ++ F +VV+G D VKVW+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 163 (62.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 28/101 (27%), Positives = 55/101 (54%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
FL++G D+ + +W + LM+L G + V V F S +L+ A +++WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
+ ++TL H+ T+++FH + +G +D +K+W+ R
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 151 (58.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 43/161 (26%), Positives = 68/161 (42%)
Query: 136 HTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL 195
+ GH + + F P +VS D +KVWD G K H ++ I F
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 196 EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSW 254
LLA+ SAD T+K WD + FE I + V ++ P+G + S D +K++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 255 EPVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWV 294
+ C + + + N DG L+ +V +WV
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Score = 121 (47.7 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 32/143 (22%), Positives = 60/143 (41%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H+ +V IS + L + D + LW + ++ G V SVA +
Sbjct: 149 HTDSVQDISFDHSG-KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
++ + IK+W+++ V+T TGH+ V + G AS D +++W + K
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 134 CIHTYKGHTRGINTIRFTPDGRW 156
C + H + I + P+ +
Sbjct: 268 CKAELREHEHVVECISWAPESSY 290
Score = 118 (46.6 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 30/114 (26%), Positives = 55/114 (48%)
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL-EFLLATG 202
G T + G +++SG D +K+WD++ G L H+ +R + FH +F+L+
Sbjct: 298 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA 357
Query: 203 SADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWE 255
D+T++ WD + + + V ++ FH + +G D +KV WE
Sbjct: 358 D-DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 258 (95.9 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 57/195 (29%), Positives = 93/195 (47%)
Query: 43 WAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSN 102
W I +P +L G SPV V F ++++ + IK+WD E RTL GH +
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 103 CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGF 162
+ F G+ AS D +K+WD + CI T GH ++++ P+G +VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 163 DNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGST 222
D +K+W++ G + F H +R + + L+A+ S D+TV+ W + T E
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 223 RPEVTGVHAITFHPD 237
R V I++ P+
Sbjct: 273 REHEHVVECISWAPE 287
Score = 215 (80.7 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 41/164 (25%), Positives = 80/164 (48%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++ +D + +W +L G + V ++FD + L+ + ++ IKLWD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ +RT+ GH N ++V P G+ S D +K+W+++ C+ T+ GH + +R
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHP 194
DG + S D V+VW + + + + HE + I + P
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 195 (73.7 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 43/159 (27%), Positives = 72/159 (45%)
Query: 96 LTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR 155
L+GH+S T V FHP S D +K+WD T KGHT + I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 156 WVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET 215
+ S D +K+WD + + H+ ++ S+ P + + S D+T+K W+++T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 216 FELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSW 254
+ + V + + DG TL + ++ V W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 261
Score = 183 (69.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 112 GEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDL 171
G F SG D +K+WD+ C+ T GH + + F G++++S D ++VWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 172 TAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
+ + HE + S+DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 177 (67.4 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
+L+G+ IK+WD+ + TL GH + V FH G+F S D L++WD + K
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 133 GCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
C+ T H + ++ F +VV+G D VKVW+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 163 (62.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 28/101 (27%), Positives = 55/101 (54%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
FL++G D+ + +W + LM+L G + V V F S +L+ A +++WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
+ ++TL H+ T+++FH + +G +D +K+W+ R
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 151 (58.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 43/161 (26%), Positives = 68/161 (42%)
Query: 136 HTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL 195
+ GH + + F P +VS D +KVWD G K H ++ I F
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 196 EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSW 254
LLA+ SAD T+K WD + FE I + V ++ P+G + S D +K++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 255 EPVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWV 294
+ C + + + N DG L+ +V +WV
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Score = 121 (47.7 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 32/143 (22%), Positives = 60/143 (41%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H+ +V IS + L + D + LW + ++ G V SVA +
Sbjct: 149 HTDSVQDISFDHSG-KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
++ + IK+W+++ V+T TGH+ V + G AS D +++W + K
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 134 CIHTYKGHTRGINTIRFTPDGRW 156
C + H + I + P+ +
Sbjct: 268 CKAELREHEHVVECISWAPESSY 290
Score = 118 (46.6 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 30/114 (26%), Positives = 55/114 (48%)
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL-EFLLATG 202
G T + G +++SG D +K+WD++ G L H+ +R + FH +F+L+
Sbjct: 298 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA 357
Query: 203 SADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWE 255
D+T++ WD + + + V ++ FH + +G D +KV WE
Sbjct: 358 D-DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 258 (95.9 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 57/195 (29%), Positives = 93/195 (47%)
Query: 43 WAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSN 102
W I +P +L G SPV V F ++++ + IK+WD E RTL GH +
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 103 CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGF 162
+ F G+ AS D +K+WD + CI T GH ++++ P+G +VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 163 DNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGST 222
D +K+W++ G + F H +R + + L+A+ S D+TV+ W + T E
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 223 RPEVTGVHAITFHPD 237
R V I++ P+
Sbjct: 273 REHEHVVECISWAPE 287
Score = 215 (80.7 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 41/164 (25%), Positives = 80/164 (48%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++ +D + +W +L G + V ++FD + L+ + ++ IKLWD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ +RT+ GH N ++V P G+ S D +K+W+++ C+ T+ GH + +R
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHP 194
DG + S D V+VW + + + + HE + I + P
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 195 (73.7 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 43/159 (27%), Positives = 72/159 (45%)
Query: 96 LTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR 155
L+GH+S T V FHP S D +K+WD T KGHT + I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 156 WVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET 215
+ S D +K+WD + + H+ ++ S+ P + + S D+T+K W+++T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 216 FELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSW 254
+ + V + + DG TL + ++ V W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 261
Score = 183 (69.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 112 GEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDL 171
G F SG D +K+WD+ C+ T GH + + F G++++S D ++VWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 172 TAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
+ + HE + S+DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 177 (67.4 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
+L+G+ IK+WD+ + TL GH + V FH G+F S D L++WD + K
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 133 GCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
C+ T H + ++ F +VV+G D VKVW+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 163 (62.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 28/101 (27%), Positives = 55/101 (54%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
FL++G D+ + +W + LM+L G + V V F S +L+ A +++WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
+ ++TL H+ T+++FH + +G +D +K+W+ R
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 151 (58.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 43/161 (26%), Positives = 68/161 (42%)
Query: 136 HTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL 195
+ GH + + F P +VS D +KVWD G K H ++ I F
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 196 EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSW 254
LLA+ SAD T+K WD + FE I + V ++ P+G + S D +K++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 255 EPVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWV 294
+ C + + + N DG L+ +V +WV
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Score = 121 (47.7 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 32/143 (22%), Positives = 60/143 (41%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H+ +V IS + L + D + LW + ++ G V SVA +
Sbjct: 149 HTDSVQDISFDHSG-KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
++ + IK+W+++ V+T TGH+ V + G AS D +++W + K
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 134 CIHTYKGHTRGINTIRFTPDGRW 156
C + H + I + P+ +
Sbjct: 268 CKAELREHEHVVECISWAPESSY 290
Score = 118 (46.6 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 30/114 (26%), Positives = 55/114 (48%)
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL-EFLLATG 202
G T + G +++SG D +K+WD++ G L H+ +R + FH +F+L+
Sbjct: 298 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA 357
Query: 203 SADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWE 255
D+T++ WD + + + V ++ FH + +G D +KV WE
Sbjct: 358 D-DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 258 (95.9 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 57/195 (29%), Positives = 93/195 (47%)
Query: 43 WAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSN 102
W I +P +L G SPV V F ++++ + IK+WD E RTL GH +
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 103 CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGF 162
+ F G+ AS D +K+WD + CI T GH ++++ P+G +VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 163 DNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGST 222
D +K+W++ G + F H +R + + L+A+ S D+TV+ W + T E
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 223 RPEVTGVHAITFHPD 237
R V I++ P+
Sbjct: 273 REHEHVVECISWAPE 287
Score = 215 (80.7 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 41/164 (25%), Positives = 80/164 (48%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++ +D + +W +L G + V ++FD + L+ + ++ IKLWD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ +RT+ GH N ++V P G+ S D +K+W+++ C+ T+ GH + +R
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHP 194
DG + S D V+VW + + + + HE + I + P
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 195 (73.7 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 43/159 (27%), Positives = 72/159 (45%)
Query: 96 LTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR 155
L+GH+S T V FHP S D +K+WD T KGHT + I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 156 WVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET 215
+ S D +K+WD + + H+ ++ S+ P + + S D+T+K W+++T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 216 FELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSW 254
+ + V + + DG TL + ++ V W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 261
Score = 183 (69.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 112 GEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDL 171
G F SG D +K+WD+ C+ T GH + + F G++++S D ++VWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 172 TAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
+ + HE + S+DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 177 (67.4 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
+L+G+ IK+WD+ + TL GH + V FH G+F S D L++WD + K
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 133 GCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
C+ T H + ++ F +VV+G D VKVW+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 163 (62.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 28/101 (27%), Positives = 55/101 (54%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
FL++G D+ + +W + LM+L G + V V F S +L+ A +++WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
+ ++TL H+ T+++FH + +G +D +K+W+ R
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 151 (58.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 43/161 (26%), Positives = 68/161 (42%)
Query: 136 HTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL 195
+ GH + + F P +VS D +KVWD G K H ++ I F
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 196 EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSW 254
LLA+ SAD T+K WD + FE I + V ++ P+G + S D +K++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 255 EPVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWV 294
+ C + + + N DG L+ +V +WV
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Score = 121 (47.7 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 32/143 (22%), Positives = 60/143 (41%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H+ +V IS + L + D + LW + ++ G V SVA +
Sbjct: 149 HTDSVQDISFDHSG-KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
++ + IK+W+++ V+T TGH+ V + G AS D +++W + K
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 134 CIHTYKGHTRGINTIRFTPDGRW 156
C + H + I + P+ +
Sbjct: 268 CKAELREHEHVVECISWAPESSY 290
Score = 118 (46.6 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 30/114 (26%), Positives = 55/114 (48%)
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL-EFLLATG 202
G T + G +++SG D +K+WD++ G L H+ +R + FH +F+L+
Sbjct: 298 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA 357
Query: 203 SADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWE 255
D+T++ WD + + + V ++ FH + +G D +KV WE
Sbjct: 358 D-DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 258 (95.9 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 57/195 (29%), Positives = 93/195 (47%)
Query: 43 WAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSN 102
W I +P +L G SPV V F ++++ + IK+WD E RTL GH +
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 103 CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGF 162
+ F G+ AS D +K+WD + CI T GH ++++ P+G +VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 163 DNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGST 222
D +K+W++ G + F H +R + + L+A+ S D+TV+ W + T E
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 223 RPEVTGVHAITFHPD 237
R V I++ P+
Sbjct: 273 REHEHVVECISWAPE 287
Score = 215 (80.7 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 41/164 (25%), Positives = 80/164 (48%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++ +D + +W +L G + V ++FD + L+ + ++ IKLWD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ +RT+ GH N ++V P G+ S D +K+W+++ C+ T+ GH + +R
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHP 194
DG + S D V+VW + + + + HE + I + P
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 195 (73.7 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 43/159 (27%), Positives = 72/159 (45%)
Query: 96 LTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR 155
L+GH+S T V FHP S D +K+WD T KGHT + I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 156 WVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET 215
+ S D +K+WD + + H+ ++ S+ P + + S D+T+K W+++T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 216 FELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSW 254
+ + V + + DG TL + ++ V W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 261
Score = 183 (69.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 112 GEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDL 171
G F SG D +K+WD+ C+ T GH + + F G++++S D ++VWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 172 TAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
+ + HE + S+DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 177 (67.4 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
+L+G+ IK+WD+ + TL GH + V FH G+F S D L++WD + K
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 133 GCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
C+ T H + ++ F +VV+G D VKVW+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 163 (62.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 28/101 (27%), Positives = 55/101 (54%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
FL++G D+ + +W + LM+L G + V V F S +L+ A +++WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
+ ++TL H+ T+++FH + +G +D +K+W+ R
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 151 (58.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 43/161 (26%), Positives = 68/161 (42%)
Query: 136 HTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL 195
+ GH + + F P +VS D +KVWD G K H ++ I F
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 196 EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSW 254
LLA+ SAD T+K WD + FE I + V ++ P+G + S D +K++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 255 EPVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWV 294
+ C + + + N DG L+ +V +WV
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Score = 121 (47.7 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 32/143 (22%), Positives = 60/143 (41%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H+ +V IS + L + D + LW + ++ G V SVA +
Sbjct: 149 HTDSVQDISFDHSG-KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
++ + IK+W+++ V+T TGH+ V + G AS D +++W + K
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 134 CIHTYKGHTRGINTIRFTPDGRW 156
C + H + I + P+ +
Sbjct: 268 CKAELREHEHVVECISWAPESSY 290
Score = 118 (46.6 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 30/114 (26%), Positives = 55/114 (48%)
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL-EFLLATG 202
G T + G +++SG D +K+WD++ G L H+ +R + FH +F+L+
Sbjct: 298 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA 357
Query: 203 SADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWE 255
D+T++ WD + + + V ++ FH + +G D +KV WE
Sbjct: 358 D-DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 258 (95.9 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 57/195 (29%), Positives = 93/195 (47%)
Query: 43 WAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSN 102
W I +P +L G SPV V F ++++ + IK+WD E RTL GH +
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 103 CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGF 162
+ F G+ AS D +K+WD + CI T GH ++++ P+G +VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 163 DNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGST 222
D +K+W++ G + F H +R + + L+A+ S D+TV+ W + T E
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 223 RPEVTGVHAITFHPD 237
R V I++ P+
Sbjct: 273 REHEHVVECISWAPE 287
Score = 215 (80.7 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 41/164 (25%), Positives = 80/164 (48%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++ +D + +W +L G + V ++FD + L+ + ++ IKLWD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ +RT+ GH N ++V P G+ S D +K+W+++ C+ T+ GH + +R
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHP 194
DG + S D V+VW + + + + HE + I + P
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 195 (73.7 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 43/159 (27%), Positives = 72/159 (45%)
Query: 96 LTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR 155
L+GH+S T V FHP S D +K+WD T KGHT + I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 156 WVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET 215
+ S D +K+WD + + H+ ++ S+ P + + S D+T+K W+++T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 216 FELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSW 254
+ + V + + DG TL + ++ V W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 261
Score = 183 (69.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 112 GEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDL 171
G F SG D +K+WD+ C+ T GH + + F G++++S D ++VWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 172 TAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
+ + HE + S+DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 177 (67.4 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
+L+G+ IK+WD+ + TL GH + V FH G+F S D L++WD + K
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 133 GCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
C+ T H + ++ F +VV+G D VKVW+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 163 (62.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 28/101 (27%), Positives = 55/101 (54%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
FL++G D+ + +W + LM+L G + V V F S +L+ A +++WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
+ ++TL H+ T+++FH + +G +D +K+W+ R
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 151 (58.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 43/161 (26%), Positives = 68/161 (42%)
Query: 136 HTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL 195
+ GH + + F P +VS D +KVWD G K H ++ I F
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 196 EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSW 254
LLA+ SAD T+K WD + FE I + V ++ P+G + S D +K++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 255 EPVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWV 294
+ C + + + N DG L+ +V +WV
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Score = 121 (47.7 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 32/143 (22%), Positives = 60/143 (41%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H+ +V IS + L + D + LW + ++ G V SVA +
Sbjct: 149 HTDSVQDISFDHSG-KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
++ + IK+W+++ V+T TGH+ V + G AS D +++W + K
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 134 CIHTYKGHTRGINTIRFTPDGRW 156
C + H + I + P+ +
Sbjct: 268 CKAELREHEHVVECISWAPESSY 290
Score = 118 (46.6 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 30/114 (26%), Positives = 55/114 (48%)
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL-EFLLATG 202
G T + G +++SG D +K+WD++ G L H+ +R + FH +F+L+
Sbjct: 298 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA 357
Query: 203 SADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWE 255
D+T++ WD + + + V ++ FH + +G D +KV WE
Sbjct: 358 D-DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 258 (95.9 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 57/195 (29%), Positives = 93/195 (47%)
Query: 43 WAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSN 102
W I +P +L G SPV V F ++++ + IK+WD E RTL GH +
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 103 CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGF 162
+ F G+ AS D +K+WD + CI T GH ++++ P+G +VS
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 163 DNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGST 222
D +K+W++ G + F H +R + + L+A+ S D+TV+ W + T E
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 223 RPEVTGVHAITFHPD 237
R V I++ P+
Sbjct: 273 REHEHVVECISWAPE 287
Score = 215 (80.7 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 41/164 (25%), Positives = 80/164 (48%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
+++ +D + +W +L G + V ++FD + L+ + ++ IKLWD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ +RT+ GH N ++V P G+ S D +K+W+++ C+ T+ GH + +R
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHP 194
DG + S D V+VW + + + + HE + I + P
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 195 (73.7 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 43/159 (27%), Positives = 72/159 (45%)
Query: 96 LTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR 155
L+GH+S T V FHP S D +K+WD T KGHT + I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 156 WVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET 215
+ S D +K+WD + + H+ ++ S+ P + + S D+T+K W+++T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 216 FELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSW 254
+ + V + + DG TL + ++ V W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 261
Score = 183 (69.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 112 GEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDL 171
G F SG D +K+WD+ C+ T GH + + F G++++S D ++VWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 172 TAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
+ + HE + S+DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 177 (67.4 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
+L+G+ IK+WD+ + TL GH + V FH G+F S D L++WD + K
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 133 GCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
C+ T H + ++ F +VV+G D VKVW+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 163 (62.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 28/101 (27%), Positives = 55/101 (54%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
FL++G D+ + +W + LM+L G + V V F S +L+ A +++WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
+ ++TL H+ T+++FH + +G +D +K+W+ R
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 151 (58.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 43/161 (26%), Positives = 68/161 (42%)
Query: 136 HTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL 195
+ GH + + F P +VS D +KVWD G K H ++ I F
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 196 EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSW 254
LLA+ SAD T+K WD + FE I + V ++ P+G + S D +K++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 255 EPVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWV 294
+ C + + + N DG L+ +V +WV
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Score = 121 (47.7 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 32/143 (22%), Positives = 60/143 (41%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H+ +V IS + L + D + LW + ++ G V SVA +
Sbjct: 149 HTDSVQDISFDHSG-KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
++ + IK+W+++ V+T TGH+ V + G AS D +++W + K
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 134 CIHTYKGHTRGINTIRFTPDGRW 156
C + H + I + P+ +
Sbjct: 268 CKAELREHEHVVECISWAPESSY 290
Score = 118 (46.6 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 30/114 (26%), Positives = 55/114 (48%)
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL-EFLLATG 202
G T + G +++SG D +K+WD++ G L H+ +R + FH +F+L+
Sbjct: 298 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA 357
Query: 203 SADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWE 255
D+T++ WD + + + V ++ FH + +G D +KV WE
Sbjct: 358 D-DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 244 (91.0 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 57/217 (26%), Positives = 111/217 (51%)
Query: 2 AKRGYK-LQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSP 60
A+ Y+ L+ H+ V C++ + +++G D+ + +W + + + S P
Sbjct: 114 ARSPYECLKVLRGHTNFVFCVNFNPPS-NLIVSGSFDETIRIWEVKTGKCVRMIKAHSMP 172
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTA-VEFHPFGEFFASGC 119
+ SV F+ L+++ + G K+WD +E ++TL KS + +F P G+F
Sbjct: 173 ISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVAT 232
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRGINTIR--FT-PDGRWVVSGGFDNVVKVWDLTAGKL 176
+D+ LK+ + + Y GHT + I F+ +G+++VSG DN V +WDL A +
Sbjct: 233 LDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNI 292
Query: 177 LHDFKFHEGHIRSIDFHPLEF-LLATGS-ADRTVKFW 211
L + H + S+ HP++ + ++G+ D+T++ W
Sbjct: 293 LQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 232 (86.7 bits), Expect = 7.7e-17, P = 7.7e-17
Identities = 62/255 (24%), Positives = 110/255 (43%)
Query: 8 LQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFD 67
L+ H+A ++C+ L + D+ + LW+ + + G SS + +A+
Sbjct: 36 LKTLEGHTAAISCVKFSNDG-NLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWS 94
Query: 68 SAEVLVLAGASTGVIKLWDLEES-KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKI 126
S + + +++WD + ++ L GH + V F+P SG D ++I
Sbjct: 95 SDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRI 154
Query: 127 WDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAG---KLLHDFKFH 183
W+++ C+ K H+ I+++ F DG +VS D K+WD G K L D K
Sbjct: 155 WEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDK-- 212
Query: 184 EGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAIT--FH-PDGRT 240
+ F P + + D T+K + T + + V IT F +G+
Sbjct: 213 SPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKY 272
Query: 241 LFSGFDDNLKVYSWE 255
+ SG +DN VY W+
Sbjct: 273 IVSGSEDNC-VYLWD 286
Score = 215 (80.7 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 53/237 (22%), Positives = 109/237 (45%)
Query: 8 LQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKP-TALMSLCGLSSPVDSVAF 66
+ + HS+ ++ ++ + + + DD + +W P L L G ++ V V F
Sbjct: 78 IHRYEGHSSGISDLAWSSDS-HYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNF 136
Query: 67 DSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKI 126
+ L+++G+ I++W+++ K VR + H ++V F+ G S D + KI
Sbjct: 137 NPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKI 196
Query: 127 WDIRKKGCIHTY-KGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEG 185
WD ++ C+ T + ++ +F+P+G++++ D+ +K+ + GK L K + G
Sbjct: 197 WDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFL---KVYTG 253
Query: 186 HIRSIDFHPLEF------LLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHP 236
H + F + +GS D V WDL+ ++ V +++ HP
Sbjct: 254 HTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHP 310
>UNIPROTKB|Q3SZK1 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9913 "Bos taurus" [GO:0045766 "positive regulation of
angiogenesis" evidence=NAS] [GO:0010595 "positive regulation of
endothelial cell migration" evidence=IMP] [GO:0014909 "smooth
muscle cell migration" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BC102815 IPI:IPI00693899
RefSeq:NP_001070463.1 UniGene:Bt.20293 ProteinModelPortal:Q3SZK1
STRING:Q3SZK1 PRIDE:Q3SZK1 Ensembl:ENSBTAT00000005126 GeneID:767919
KEGG:bta:767919 CTD:14 GeneTree:ENSGT00690000102167
HOGENOM:HOG000261676 HOVERGEN:HBG061307 InParanoid:Q3SZK1
OMA:VWSFEVG OrthoDB:EOG4D26PX NextBio:20918276 ArrayExpress:Q3SZK1
GO:GO:0001525 GO:GO:0045766 GO:GO:0010595 GO:GO:0014909
Uniprot:Q3SZK1
Length = 434
Score = 259 (96.2 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 62/218 (28%), Positives = 97/218 (44%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAE 70
F HSA+V C+S+ K +TGG+D K +W + L G V F
Sbjct: 87 FALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDS 146
Query: 71 VLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
LV G +G++K+W ++ + V + + +E+HP +G D N +W +
Sbjct: 147 TLVATGDMSGLLKVWQVDTKEEVWSFEA--GDLEWMEWHPRAPVLLAGTADGNTWMWKVP 204
Query: 131 KKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGH---I 187
C T++G R PDG+ V G D +++WDL G +H K EGH +
Sbjct: 205 TGDC-KTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGNSIHVLKGTEGHQGPL 263
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPE 225
+ + L+ TGS D K T +++G RPE
Sbjct: 264 TCVATNQDGSLILTGSVDCQAKLVSATTGKVVGVFRPE 301
>UNIPROTKB|Q13685 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0014909 "smooth muscle cell
migration" evidence=IEP] [GO:0010595 "positive regulation of
endothelial cell migration" evidence=ISS] [GO:0009986 "cell
surface" evidence=IDA] [GO:0001525 "angiogenesis" evidence=NAS]
[GO:0008201 "heparin binding" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005737
GO:GO:0009986 GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0008201
CTD:14 HOGENOM:HOG000261676 HOVERGEN:HBG061307 OrthoDB:EOG4D26PX
GO:GO:0001525 GO:GO:0010595 GO:GO:0014909 EMBL:M95627 EMBL:CR456755
EMBL:BC008809 EMBL:BC020244 EMBL:BC039866 IPI:IPI00014481
PIR:I39383 RefSeq:NP_001078.2 UniGene:Hs.83347
ProteinModelPortal:Q13685 SMR:Q13685 IntAct:Q13685
MINT:MINT-1418005 STRING:Q13685 PhosphoSite:Q13685 DMDM:62906874
PaxDb:Q13685 PRIDE:Q13685 Ensembl:ENST00000248450 GeneID:14
KEGG:hsa:14 UCSC:uc002vhk.3 GeneCards:GC02M219092 HGNC:HGNC:18
HPA:CAB017717 MIM:603488 neXtProt:NX_Q13685 PharmGKB:PA24365
InParanoid:Q13685 ChiTaRS:AAMP GenomeRNAi:14 NextBio:31
ArrayExpress:Q13685 Bgee:Q13685 CleanEx:HS_AAMP
Genevestigator:Q13685 GermOnline:ENSG00000127837 Uniprot:Q13685
Length = 434
Score = 259 (96.2 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 62/218 (28%), Positives = 97/218 (44%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAE 70
F HSA+V C+S+ K +TGG+D K +W + L G V F
Sbjct: 87 FALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDS 146
Query: 71 VLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
LV G +G++K+W ++ + V + + +E+HP +G D N +W +
Sbjct: 147 TLVATGDMSGLLKVWQVDTKEEVWSFEA--GDLEWMEWHPRAPVLLAGTADGNTWMWKVP 204
Query: 131 KKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGH---I 187
C T++G R PDG+ V G D +++WDL G +H K EGH +
Sbjct: 205 NGDC-KTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPL 263
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPE 225
+ + L+ TGS D K T +++G RPE
Sbjct: 264 TCVAANQDGSLILTGSVDCQAKLVSATTGKVVGVFRPE 301
>UNIPROTKB|Q5RCG7 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9601 "Pongo abelii" [GO:0009986 "cell surface"
evidence=ISS] [GO:0010595 "positive regulation of endothelial cell
migration" evidence=ISS] [GO:0014909 "smooth muscle cell migration"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 CTD:14 GeneTree:ENSGT00690000102167
HOVERGEN:HBG061307 OrthoDB:EOG4D26PX GO:GO:0001525 GO:GO:0010595
GO:GO:0014909 EMBL:CR858303 EMBL:CR859206 RefSeq:NP_001125288.1
UniGene:Pab.19266 ProteinModelPortal:Q5RCG7
Ensembl:ENSPPYT00000015307 GeneID:100172186 KEGG:pon:100172186
InParanoid:Q5RCG7 Uniprot:Q5RCG7
Length = 434
Score = 259 (96.2 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 62/218 (28%), Positives = 97/218 (44%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAE 70
F HSA+V C+S+ K +TGG+D K +W + L G V F
Sbjct: 87 FALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDS 146
Query: 71 VLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
LV G +G++K+W ++ + V + + +E+HP +G D N +W +
Sbjct: 147 TLVATGDMSGLLKVWQVDTKEEVWSFEA--GDLEWMEWHPRAPVLLAGTADGNTWMWKVP 204
Query: 131 KKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGH---I 187
C T++G R PDG+ V G D +++WDL G +H K EGH +
Sbjct: 205 NGDC-KTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPL 263
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPE 225
+ + L+ TGS D K T +++G RPE
Sbjct: 264 TCVATNQDGSLILTGSVDCQAKLVSATTGKVVGVFRPE 301
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 263 (97.6 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 52/183 (28%), Positives = 89/183 (48%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L++ +D V W + T + G + PV V + + +LW +
Sbjct: 369 LLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFART 428
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+R GH S+ V+FHP + A+G D +++W R+ + + GH + T+ F
Sbjct: 429 YPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAF 488
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
+P+G+++ S G D +K+WDL +G L D + H I S+ F L+A+ S D TV+
Sbjct: 489 SPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRV 548
Query: 211 WDL 213
WD+
Sbjct: 549 WDI 551
Score = 236 (88.1 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 54/186 (29%), Positives = 84/186 (45%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
+ T D+ LW+ + L G S VD V F + G++ ++LW +
Sbjct: 410 YFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQ 469
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
VR TGH+ + F P G++ AS D LK+WD+ G +GHT I+++
Sbjct: 470 GASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLS 529
Query: 150 FTPDGRWVVSGGFDNVVKVWDL--------TAG---KLLHDFKFHEGHIRSIDFHPLEFL 198
F+ D V S DN V+VWD+ T G +L+ + +I ++ F L
Sbjct: 530 FSQDSSLVASASMDNTVRVWDIRNAHGSAPTDGCSSELIGQYTGSTSNILNVQFMACNLL 589
Query: 199 LATGSA 204
L TG+A
Sbjct: 590 LVTGTA 595
Score = 181 (68.8 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 47/169 (27%), Positives = 78/169 (46%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
R Y L+ + H ++V+C+ + ++ TG D+ V LW+ + ++ G PV +
Sbjct: 427 RTYPLRLYAGHLSDVDCVKFHPNS-NYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLT 485
Query: 64 VAFD-SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
+AF + + L AG +KLWDL + + L GH +++ F AS MD
Sbjct: 486 LAFSPNGKYLASAGEDQR-LKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVASASMDN 544
Query: 123 NLKIWDIRKK-------GC----IHTYKGHTRGINTIRFTPDGRWVVSG 160
+++WDIR GC I Y G T I ++F +V+G
Sbjct: 545 TVRVWDIRNAHGSAPTDGCSSELIGQYTGSTSNILNVQFMACNLLLVTG 593
Score = 162 (62.1 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 46/206 (22%), Positives = 82/206 (39%)
Query: 93 VRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTP 152
++TL GH F S D+ ++ WD++ Y+GH + + +P
Sbjct: 347 IKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSP 406
Query: 153 DGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSID---FHPLEFLLATGSADRTVK 209
+ + D ++W + + + GH+ +D FHP +ATGS D+TV+
Sbjct: 407 CSLYFSTASHDRTARLWSFAR---TYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVR 463
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS-GFDDNLKVYSWEPVICHDSVDMGWS 268
W + V + F P+G+ L S G D LK++ +
Sbjct: 464 LWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTD 523
Query: 269 TLGDLCIN-DGKLLGCSFYRNSVGIW 293
T+ L + D L+ + N+V +W
Sbjct: 524 TISSLSFSQDSSLVASASMDNTVRVW 549
Score = 133 (51.9 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 47/213 (22%), Positives = 86/213 (40%)
Query: 48 PTALMSLCGLSSPVDSVAFDSAEV-----LVLAGASTGVIKLWDLEESKMVRTLTGHKSN 102
P +L ++C + ++AEV L+ AG +KLW L K+ HK++
Sbjct: 265 PPSLTTVCFYAFQHTEQLLNTAEVSADSRLLAAGFDNSAVKLWSLRARKL--KAGPHKAD 322
Query: 103 CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGC-IHTYKGHTRGINTIRFTPDGRWVVSGG 161
+ + C + D G I T +GH+ + F D ++S
Sbjct: 323 VSKIRL---------ACDVLEEEADDEDASGSEIKTLRGHSGPVYRTAFLTDASGLLSCS 373
Query: 162 FDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGS 221
D+ V+ WDL + ++ H + +D P +T S DRT + W +
Sbjct: 374 EDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRL 433
Query: 222 TRPEVTGVHAITFHPDGRTLFSGFDDN-LKVYS 253
++ V + FHP+ + +G D ++++S
Sbjct: 434 YAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWS 466
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 260 (96.6 bits), Expect = 5.5e-19, P = 5.5e-19
Identities = 65/238 (27%), Positives = 108/238 (45%)
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
V SVAFD + G++ IK+WD+ + TLTGH + + S
Sbjct: 173 VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGD 232
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
D +K WD+ + I +Y GH G+ + P V++GG D+V +VWD+ +
Sbjct: 233 DKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVL 292
Query: 181 KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
H+ + S+ P + + TGS D T+KFWDL + + + V A+ HP
Sbjct: 293 P-HDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKEND 351
Query: 241 LFSGFDDNLKVYSW-EPVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWVAD 296
S DN+K +S + CH+ + + + + +N DG ++ + G+W D
Sbjct: 352 FVSASADNIKKFSLPKGEFCHNMLSLQRDIINAVAVNEDGVMVTGG---DKGGLWFWD 406
Score = 233 (87.1 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 57/226 (25%), Positives = 102/226 (45%)
Query: 33 TGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKM 92
TG D+ + +W + ++L G V +A + + + +K WDLE++K+
Sbjct: 187 TGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKV 246
Query: 93 VRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTP 152
+R+ GH + HP + +G D+ ++WDIR K I H + ++ P
Sbjct: 247 IRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLP-HDSDVFSVLARP 305
Query: 153 DGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
V++G D+ +K WDL GK + H+ +R++ HP E + SAD KF
Sbjct: 306 TDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASADNIKKF-S 364
Query: 213 LETFELIG---STRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
L E S + ++ ++A+ + DG + G L + W+
Sbjct: 365 LPKGEFCHNMLSLQRDI--INAVAVNEDGVMVTGGDKGGLWFWDWK 408
Score = 180 (68.4 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 44/163 (26%), Positives = 70/163 (42%)
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
K R L GH +V F P E+F +G D +KIWD+ T GH + +
Sbjct: 161 KNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAV 220
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
+ ++ S G D VK WDL K++ + H + + HP ++ TG D +
Sbjct: 221 SNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRV 280
Query: 211 WDLETFELIGSTRPEVTGVHAITFHP-DGRTLFSGFDDNLKVY 252
WD+ T I P + V ++ P D + + D +K +
Sbjct: 281 WDIRTKMQI-FVLPHDSDVFSVLARPTDPQVITGSHDSTIKFW 322
Score = 163 (62.4 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 57/250 (22%), Positives = 104/250 (41%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H V +++ + ++ + GDD++V W + + + S G V +A +V
Sbjct: 211 HIGQVRGLAVSNRHT-YMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVV 269
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
L G V ++WD+ +KM + H S+ +V P +G D+ +K WD+R
Sbjct: 270 LTGGRDSVCRVWDIR-TKMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGK 328
Query: 134 CIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF-KFHEGHIRSIDF 192
+ T H + + + P VS DN+ K + L G+ H+ I ++
Sbjct: 329 SMATITNHKKTVRAMALHPKENDFVSASADNIKK-FSLPKGEFCHNMLSLQRDIINAVAV 387
Query: 193 HPLEFLLATGSADRTVKFWD---------LETFELIGSTRPEVTGVHAITFHPDGRTLFS 243
+ + ++ TG + FWD ET GS E G++A + G L +
Sbjct: 388 NE-DGVMVTGGDKGGLWFWDWKSGHNFQRAETIVQPGSLESEA-GIYAACYDQTGSRLVT 445
Query: 244 -GFDDNLKVY 252
D +K++
Sbjct: 446 CEGDKTIKMW 455
>UNIPROTKB|E2R5F8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 CTD:55054 GO:GO:0000421 InterPro:IPR013923
Pfam:PF08614 OMA:LETECQE EMBL:AAEX03014453 RefSeq:XP_850664.1
ProteinModelPortal:E2R5F8 Ensembl:ENSCAFT00000018720 GeneID:477412
KEGG:cfa:477412 NextBio:20852897 Uniprot:E2R5F8
Length = 607
Score = 262 (97.3 bits), Expect = 6.7e-19, P = 6.7e-19
Identities = 77/254 (30%), Positives = 123/254 (48%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAI-GKPTALM-SLCGLSSPVDSVAFDS 68
F AH VN + + R L TGG D++V LW + G SL G ++ + S+ FDS
Sbjct: 318 FDAHDGEVNAVQFSPGS-RLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDS 376
Query: 69 AEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWD 128
A +LA ++ ++W +++ ++ TLTGH + +F SG D LK+WD
Sbjct: 377 AGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWD 436
Query: 129 IRKKGCIHT-YKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHI 187
+R K CI T + G + N I T + V+SG FD ++ WD+ + ++ + + G I
Sbjct: 437 LRSKVCIKTVFAGSS--CNDIVCTE--QCVMSGHFDKKIRFWDIRSESIVREMELL-GKI 491
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDL------ETFELIG-STRPEVTGVHAITFHPDGRT 240
++D +P L + S D +K DL +TF G + T V F PDG
Sbjct: 492 TALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWTRV---VFSPDGGY 548
Query: 241 LFSGFDDNLKVYSW 254
+ +G + +Y W
Sbjct: 549 VAAGSAEG-SLYIW 561
Score = 193 (73.0 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 72/295 (24%), Positives = 126/295 (42%)
Query: 48 PTALMSLCGL-SSPVDSVAFDSAEVLVLAGASTGVIKLWDL--EESKMVRTLTGHKSNCT 104
PT M + V++V F L+ G +KLW++ ++ + +L+G + T
Sbjct: 311 PTTAMCIFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGIT 370
Query: 105 AVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDN 164
++EF G + + D +IW + HT GH+ + + +F D +VSG D
Sbjct: 371 SIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDR 430
Query: 165 VVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRP 224
+K+WDL + K+ F D E + +G D+ ++FWD+ + ++
Sbjct: 431 TLKLWDLRS-KVCIKTVFAGSSCN--DIVCTEQCVMSGHFDKKIRFWDIRSESIVREM-- 485
Query: 225 EVTG-VHAITFHPDGRTLFS-GFDDNLKVYSWEPVICHDSVDM-GWSTLGD----LCIND 277
E+ G + A+ +P+ L S DD LK+ + G+ D + D
Sbjct: 486 ELLGKITALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWTRVVFSPD 545
Query: 278 GKLLGCSFYRNSVGIWVADVSHVEPYGVGAPEPDQSICTEVKFNPPGSH--SLEK 330
G + S+ IW VE V + + SI V ++P GSH S++K
Sbjct: 546 GGYVAAGSAEGSLYIWSVLSGKVEK--VLSKQHGSSI-NAVAWSPSGSHVVSVDK 597
Score = 139 (54.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 49/195 (25%), Positives = 84/195 (43%)
Query: 6 YKLQE-FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
Y+L+ HS V R +++G D+ + LW + + ++ SS D V
Sbjct: 398 YRLRHTLTGHSGKVLSAKFLLDNAR-IVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIV 456
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
E V++G I+ WD+ +VR + TA++ +P S D L
Sbjct: 457 C---TEQCVMSGHFDKKIRFWDIRSESIVREME-LLGKITALDLNPERTELLSCSRDDLL 512
Query: 125 KIWDIRKKGCIHTYK--GHTRGINTIR--FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
KI D+R T+ G G + R F+PDG +V +G + + +W + +GK+
Sbjct: 513 KIIDLRINAVRQTFSAPGFKCGSDWTRVVFSPDGGYVAAGSAEGSLYIWSVLSGKVEKVL 572
Query: 181 -KFHEGHIRSIDFHP 194
K H I ++ + P
Sbjct: 573 SKQHGSSINAVAWSP 587
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 262 (97.3 bits), Expect = 6.9e-19, P = 6.9e-19
Identities = 63/241 (26%), Positives = 117/241 (48%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
++L+TG +D+++ LW + G + S+ F +++G+ +LWD+E
Sbjct: 373 KYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVE 432
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ + L ++ TA+ P +F A G +D +++W + + +GH + +I
Sbjct: 433 TGQCILKLE-IENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGT-LVERLEGHKESVYSI 490
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKL--LHDFK-------FHEGH---IRSIDFHPLE 196
F+PD ++SG D +KVW+L A + L K + GH + S+ P
Sbjct: 491 AFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDS 550
Query: 197 FLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD-NLKVYSWE 255
+GS DR+++FWDL+T + + + V ++ F PDGR SG D +++S +
Sbjct: 551 RWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSID 610
Query: 256 P 256
P
Sbjct: 611 P 611
Score = 253 (94.1 bits), Expect = 6.6e-18, P = 6.6e-18
Identities = 70/260 (26%), Positives = 122/260 (46%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLS-SP-----VDSVAFD 67
H + V C+ ++L TG + Q N++ + L +L S P V ++AF
Sbjct: 312 HPSVVCCVKFSNNG-KYLATGCN-QAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFS 369
Query: 68 SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIW 127
++ G IKLWDL K+ +GH+ + +++F G F SG D ++W
Sbjct: 370 PDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLW 429
Query: 128 DIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHI 187
D+ CI + G+ I +P+ +++ G D +++VW ++ G L+ + H+ +
Sbjct: 430 DVETGQCILKLEIEN-GVTAIAISPNDQFIAVGSLDQIIRVWSVS-GTLVERLEGHKESV 487
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLETFELIG--STRPE------VTG----VHAITFH 235
SI F P +L +GS D+T+K W+L+ +G + +PE TG V ++
Sbjct: 488 YSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVS 547
Query: 236 PDGRTLFSGFDDNLKVYSWE 255
PD R SG D + W+
Sbjct: 548 PDSRWGLSGSKDRSMQF-WD 566
Score = 248 (92.4 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 54/216 (25%), Positives = 102/216 (47%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAE 70
F H ++ + RF+++G D+ LW + ++ L + + V ++A +
Sbjct: 398 FSGHEQDIYSLDFSHNG-RFIVSGSGDRTARLWDVETGQCILKL-EIENGVTAIAISPND 455
Query: 71 VLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWD-- 128
+ G+ +I++W + + +V L GHK + ++ F P SG +D +K+W+
Sbjct: 456 QFIAVGSLDQIIRVWSVSGT-LVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQ 514
Query: 129 ---------IRKKG-CIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLH 178
I+ +G C TY GHT + ++ +PD RW +SG D ++ WDL G+
Sbjct: 515 ATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYL 574
Query: 179 DFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLE 214
+ H+ + S+ F P A+GS D + W ++
Sbjct: 575 TCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSID 610
Score = 218 (81.8 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 66/233 (28%), Positives = 118/233 (50%)
Query: 92 MVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI---RKKGCIHTYKGH-TRG--I 145
+V TL H S V+F G++ A+GC ++D+ +K +H +R +
Sbjct: 306 LVHTLE-HPSVVCCVKFSNNGKYLATGCNQA-ANVFDVQTGKKLFTLHEESPDPSRDLYV 363
Query: 146 NTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDF-HPLEFLLATGSA 204
TI F+PDG+++V+G D +K+WDL+ K+ + F HE I S+DF H F+++ GS
Sbjct: 364 RTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVS-GSG 422
Query: 205 DRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEPVICHDSV 263
DRT + WD+ET + I E GV AI P+ + + G D ++V+S + + +
Sbjct: 423 DRTARLWDVETGQCILKLEIE-NGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTLV-ERL 480
Query: 264 DMGWSTLGDLCIN-DGKLLGCSFYRNSVGIWVADVSHVEPYGVGAPEPDQSIC 315
+ ++ + + D +L ++ +W ++ G+ A +P+ IC
Sbjct: 481 EGHKESVYSIAFSPDSSILLSGSLDKTIKVW--ELQATRSVGLSAIKPE-GIC 530
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 262 (97.3 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 76/253 (30%), Positives = 123/253 (48%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAI-GKPTALM-SLCGLSSPVDSVAFDS 68
F AH VN + + R L TGG D++V LW + G SL G ++ + S+ FDS
Sbjct: 334 FDAHDGEVNAVQFSPGS-RLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDS 392
Query: 69 AEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWD 128
A +LA ++ ++W +++ ++ TLTGH + +F SG D LK+WD
Sbjct: 393 AGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWD 452
Query: 129 IRKKGCIHT-YKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHI 187
+R K CI T + G + N I T + V+SG FD ++ WD+ + ++ + + G I
Sbjct: 453 LRSKVCIKTVFAGSS--CNDIVCTE--QCVMSGHFDKKIRFWDIRSESIVREMELL-GKI 507
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDL------ETFELIGSTRPEVTGVHAITFHPDGRTL 241
++D +P L + S D +K DL +TF G + A+ F PDG +
Sbjct: 508 TALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGF-KCGSDWTRAV-FSPDGSYV 565
Query: 242 FSGFDDNLKVYSW 254
+G + +Y W
Sbjct: 566 AAGAAEG-SLYIW 577
Score = 196 (74.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 71/289 (24%), Positives = 122/289 (42%)
Query: 48 PTALMSLCGL-SSPVDSVAFDSAEVLVLAGASTGVIKLWDL--EESKMVRTLTGHKSNCT 104
PT MS+ V++V F L+ G +KLW++ ++ + +L+G + T
Sbjct: 327 PTTAMSVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGIT 386
Query: 105 AVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDN 164
++EF G + + D +IW + HT GH+ + + +F D +VSG D
Sbjct: 387 SIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDR 446
Query: 165 VVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRP 224
+K+WDL + K+ F D E + +G D+ ++FWD+ + ++
Sbjct: 447 TLKLWDLRS-KVCIKTVFAGSSCN--DIVCTEQCVMSGHFDKKIRFWDIRSESIVREM-- 501
Query: 225 EVTG-VHAITFHPDGRTLFS-GFDDNLKVYSWEPVICHDSVDM-GWSTLGD----LCIND 277
E+ G + A+ +P+ L S DD LK+ + G+ D + D
Sbjct: 502 ELLGKITALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWTRAVFSPD 561
Query: 278 GKLLGCSFYRNSVGIWVADVSHVEPYGVGAPEPDQSICTEVKFNPPGSH 326
G + S+ IW VE V + SI V ++P GSH
Sbjct: 562 GSYVAAGAAEGSLYIWNVLSGKVEK--VLSKHHSSSI-NAVAWSPAGSH 607
Score = 145 (56.1 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 49/195 (25%), Positives = 85/195 (43%)
Query: 6 YKLQE-FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
Y+L+ HS V R +++G D+ + LW + + ++ SS D V
Sbjct: 414 YRLRHTLTGHSGKVLSAKFLLDNAR-IVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIV 472
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
E V++G I+ WD+ +VR + TA++ +P S D L
Sbjct: 473 C---TEQCVMSGHFDKKIRFWDIRSESIVREME-LLGKITALDLNPERTELLSCSRDDLL 528
Query: 125 KIWDIRKKGCIHTYK--GHTRGINTIR--FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
KI D+R T+ G G + R F+PDG +V +G + + +W++ +GK+
Sbjct: 529 KIIDLRINAVRQTFSAPGFKCGSDWTRAVFSPDGSYVAAGAAEGSLYIWNVLSGKVEKVL 588
Query: 181 -KFHEGHIRSIDFHP 194
K H I ++ + P
Sbjct: 589 SKHHSSSINAVAWSP 603
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 263 (97.6 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 61/206 (29%), Positives = 95/206 (46%)
Query: 53 SLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFG 112
SL G + PV AF L+L+ + I+LW L V T GH V F P G
Sbjct: 445 SLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHG 504
Query: 113 EFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLT 172
+F S D ++W + + GH ++ ++F P+ +V +G D V++WD
Sbjct: 505 YYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNM 564
Query: 173 AGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAI 232
G+ + H+G + S+ F LA+GS D + WDL L+ + + V I
Sbjct: 565 TGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTI 624
Query: 233 TFHPDGRTLFS-GFDDNLKVYSWEPV 257
TF DG L + G D+NL ++ + V
Sbjct: 625 TFSRDGTVLAAAGLDNNLTLWDFHKV 650
Score = 251 (93.4 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 71/278 (25%), Positives = 123/278 (44%)
Query: 18 VNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGA 77
V C I + L G D V +W++ P L +L S + + +SA++ V
Sbjct: 380 VTCAEISDDST-MLACGFGDSSVRIWSL-TPAKLRTLKDADS-LRELDKESADINV---- 432
Query: 78 STGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHT 137
++ D ++ R+L GH F P S D+ +++W + C+ T
Sbjct: 433 -----RMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVT 487
Query: 138 YKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEF 197
Y+GH + +RF P G + VS +D ++W + + L F H + + FHP
Sbjct: 488 YRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSN 547
Query: 198 LLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEP 256
+ATGS+DRTV+ WD T + + V ++ F GR L SG D N+ ++
Sbjct: 548 YVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSN 607
Query: 257 VICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIW 293
++ ST+ + + DG +L + N++ +W
Sbjct: 608 GSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLW 645
Score = 230 (86.0 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 49/151 (32%), Positives = 75/151 (49%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
+ ++ D+ LWA AL G S VD V F V G+S ++LWD
Sbjct: 506 YFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMT 565
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
+ VR +TGHK + +++ F G + ASG +D N+ IWD+ + T HT + TI
Sbjct: 566 GQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTIT 625
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
F+ DG + + G DN + +WD K+ D+
Sbjct: 626 FSRDGTVLAAAGLDNNLTLWDFH--KVTEDY 654
Score = 222 (83.2 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 45/182 (24%), Positives = 87/182 (47%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L++ +D + LW++ + +++ G PV V F ++ + +LW + +
Sbjct: 465 LLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSN 524
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ +R GH S+ V+FHP + A+G D +++WD + GH ++++ F
Sbjct: 525 QALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAF 584
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
+ GR++ SG D+ + +WDL+ G L+ H + +I F +LA D +
Sbjct: 585 SACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTL 644
Query: 211 WD 212
WD
Sbjct: 645 WD 646
Score = 172 (65.6 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 40/126 (31%), Positives = 62/126 (49%)
Query: 8 LQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLW--AIGKPTALMSLCGLSSPVDSVA 65
L+ FV H ++V+C+ + ++ TG D+ V LW G+ LM+ G V S+A
Sbjct: 527 LRVFVGHLSDVDCVQFHPNS-NYVATGSSDRTVRLWDNMTGQSVRLMT--GHKGSVSSLA 583
Query: 66 FDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLK 125
F + + +G+ I +WDL +V TL H S T + F G A+ +D NL
Sbjct: 584 FSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLT 643
Query: 126 IWDIRK 131
+WD K
Sbjct: 644 LWDFHK 649
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 239 (89.2 bits), Expect = 7.7e-19, P = 7.7e-19
Identities = 74/263 (28%), Positives = 121/263 (46%)
Query: 13 AHSANVNCISIGKKA---CRFLITGGDDQKVNLWAIG-KPTALMS-LCGLSSPVDSVAFD 67
AH + + GK + +I+G D V +W + L S L G V SV
Sbjct: 14 AHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVS 73
Query: 68 SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIW 127
+ ++ + + I+LWDLE K +R + + +V F P + A+G + I+
Sbjct: 74 PSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIF 133
Query: 128 DIR--KKGCIHTYKGHTRG--INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
+ KK Y TRG I +I ++PDG+++ SG D ++ ++D+ GKLLH + H
Sbjct: 134 GVETGKK----EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 189
Query: 184 EGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS 243
IRS+ F P LL T S D +K ++++ L + + V + F PD S
Sbjct: 190 AMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVS 249
Query: 244 GFDD-NLKVYSWEPVIC-HDSVD 264
D ++KV+ C H +D
Sbjct: 250 SSSDKSVKVWDVSARTCVHTFLD 272
Score = 220 (82.5 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 54/242 (22%), Positives = 109/242 (45%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD--SVAFDSAEV 71
H V + + + + D + LW + + ++ + PVD SVAF
Sbjct: 63 HQLGVVSVDVSPSG-NIMASSSLDAHIRLWDLESGKQIRAID--AGPVDAWSVAFSPDSQ 119
Query: 72 LVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRK 131
+ G+ G + ++ +E K +L ++ + P G++ ASG +D + I+DI
Sbjct: 120 HLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT 179
Query: 132 KGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSID 191
+HT +GH I ++ F+PD + +V+ D +K++++ L H + ++
Sbjct: 180 GKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVA 239
Query: 192 FHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN-LK 250
F P + + S+D++VK WD+ + + V + ++ +G + S DD +
Sbjct: 240 FSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIH 299
Query: 251 VY 252
VY
Sbjct: 300 VY 301
Score = 199 (75.1 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 39/142 (27%), Positives = 75/142 (52%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
++L +G D +N++ I L +L G + P+ S+ F L++ + G IK+++++
Sbjct: 161 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQ 220
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ + TL+GH S V F P F S D ++K+WD+ + C+HT+ H + +
Sbjct: 221 HASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGV 280
Query: 149 RFTPDGRWVVSGGFDNVVKVWD 170
++ +G +VS D + V+D
Sbjct: 281 KYNKNGSKIVSVADDQEIHVYD 302
Score = 198 (74.8 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 45/182 (24%), Positives = 85/182 (46%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L TG KVN++ + SL + S+A+ + +GA G+I ++D+
Sbjct: 121 LATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG 180
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
K++ TL GH ++ F P + + D +KI++++ T GH + + F
Sbjct: 181 KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAF 240
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
+PD VS D VKVWD++A +H F H+ + + ++ + + + D+ +
Sbjct: 241 SPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHV 300
Query: 211 WD 212
+D
Sbjct: 301 YD 302
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 239 (89.2 bits), Expect = 7.7e-19, P = 7.7e-19
Identities = 71/258 (27%), Positives = 115/258 (44%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
HS V+ + I +F ++G D + LW + T G + V SVAF + +
Sbjct: 62 HSHFVSDVVISSDG-QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQI 120
Query: 74 LAGASTGVIKLWD-LEESKMVRTLTGHKSNCTAVEFHPFGE--FFASGCMDTNLKIWDIR 130
++G+ IKLW+ L K H + V F P S D +K+W++
Sbjct: 121 VSGSRDKTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLA 180
Query: 131 KKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGH-IRS 189
+ GHT +NT+ +PDG SGG D +WDL GK H + G I +
Sbjct: 181 NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDTINA 238
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHA---------ITFHPDGRT 240
+ F P + L + ++K WDLE ++ R ++ ++ + + DG+T
Sbjct: 239 LCFSPNRYWLCAATGP-SIKIWDLEGKIIVDELRQDIITTNSKAEPPQCTSLAWSADGQT 297
Query: 241 LFSGFDDNLKVYSWEPVI 258
LF+G+ DNL + W+ I
Sbjct: 298 LFAGYTDNL-IRVWQVTI 314
Score = 226 (84.6 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 66/259 (25%), Positives = 116/259 (44%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTA-----LMSLCGLSSPVDSVAFDS 68
HS V I+ + +++ D+ + +W + + +L G S V V S
Sbjct: 14 HSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS 73
Query: 69 AEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWD 128
L+G+ G ++LWDL R GH + +V F SG D +K+W+
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWN 133
Query: 129 IRKKGCIHTYK--GHTRGINTIRFTPDGR--WVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
C +T + HT ++ +RF+P+ +VS G+D +VKVW+L KL + H
Sbjct: 134 TLGV-CKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHT 192
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG 244
G++ ++ P L A+G D WDL + + + T ++A+ F P+ L +
Sbjct: 193 GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDT-INALCFSPNRYWLCAA 251
Query: 245 FDDNLKVYSWEPVICHDSV 263
++K++ E I D +
Sbjct: 252 TGPSIKIWDLEGKIIVDEL 270
Score = 191 (72.3 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 57/232 (24%), Positives = 101/232 (43%)
Query: 72 LVLAGASTGVIKLWDL--EESKM---VRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKI 126
++L+ + I +W L +E+ R L GH + V G+F SG D L++
Sbjct: 30 MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRL 89
Query: 127 WDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK--FHE 184
WD+ + GHT+ + ++ F+ D R +VSG D +K+W+ T G + + H
Sbjct: 90 WDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWN-TLGVCKYTIQDDSHT 148
Query: 185 GHIRSIDFHPLEF--LLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLF 242
+ + F P ++ + D+ VK W+L +L + ++ +T PDG
Sbjct: 149 EWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCA 208
Query: 243 SGFDDNLKVYSWEPVICHDSVDM-GWSTLGDLCINDGKLLGCSFYRNSVGIW 293
SG D + W+ + G T+ LC + + C+ S+ IW
Sbjct: 209 SGGKDG-QAMLWDLNEGKHLYTLDGGDTINALCFSPNRYWLCAATGPSIKIW 259
Score = 141 (54.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 43/179 (24%), Positives = 81/179 (45%)
Query: 6 YKLQEFVAHSANVNCISIGKKACR-FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
Y +Q+ +H+ V+C+ + +++ G D+ V +W + + G + +++V
Sbjct: 140 YTIQDD-SHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTV 198
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
L +G G LWDL E K + TL G + A+ F P ++ ++
Sbjct: 199 TVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDT-INALCFSP-NRYWLCAATGPSI 256
Query: 125 KIWDIRKK--------GCIHTY-KGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAG 174
KIWD+ K I T K ++ ++ DG+ + +G DN+++VW +T G
Sbjct: 257 KIWDLEGKIIVDELRQDIITTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIRVWQVTIG 315
>SGD|S000004722 [details] [associations]
symbol:ASC1 "G-protein beta subunit and guanine nucleotide
dissociation inhibitor" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004871 "signal
transducer activity" evidence=IMP;IPI] [GO:0001403 "invasive growth
in response to glucose limitation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0017148
"negative regulation of translation" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IMP;IPI]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IPI]
[GO:0005092 "GDP-dissociation inhibitor activity" evidence=IDA]
[GO:0010255 "glucose mediated signaling pathway" evidence=IMP;IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004722 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 EMBL:BK006946 GO:GO:0004871
GO:GO:0001403 EMBL:Z49702 GO:GO:0022627 GO:GO:0010255
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 GO:GO:0005092 OrthoDB:EOG437VPP
PIR:S54578 RefSeq:NP_013834.1 PDB:1TRJ PDB:3FRX PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3RFG PDB:3RFH PDB:3U5C PDB:3U5G PDBsum:1TRJ
PDBsum:3FRX PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3RFG
PDBsum:3RFH PDBsum:3U5C PDBsum:3U5G ProteinModelPortal:P38011
SMR:P38011 DIP:DIP-6465N IntAct:P38011 MINT:MINT-652105
STRING:P38011 UCD-2DPAGE:P38011 PaxDb:P38011 PeptideAtlas:P38011
EnsemblFungi:YMR116C GeneID:855143 KEGG:sce:YMR116C
EvolutionaryTrace:P38011 NextBio:978537 Genevestigator:P38011
GermOnline:YMR116C Uniprot:P38011
Length = 319
Score = 239 (89.2 bits), Expect = 7.7e-19, P = 7.7e-19
Identities = 70/268 (26%), Positives = 122/268 (45%)
Query: 3 KRGYKLQEFVAHSANV-NCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
K G ++ F HS V +C A + ++ D+ + LW + G S V
Sbjct: 53 KFGVPVRSFKGHSHIVQDCTLTADGA--YALSASWDKTLRLWDVATGETYQRFVGHKSDV 110
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEF------F 115
SV D ++++G+ IK+W ++ + + TL GH + V P +
Sbjct: 111 MSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTI 169
Query: 116 ASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGK 175
S D +K W++ + + GH INT+ +PDG + S G D + +W+L A K
Sbjct: 170 ISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKK 229
Query: 176 LLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGV------ 229
++ + + S+ F P + LA +A +K + L+ L+ RPE G
Sbjct: 230 AMYTLSAQD-EVFSLAFSPNRYWLAAATATG-IKVFSLDPQYLVDDLRPEFAGYSKAAEP 287
Query: 230 HAIT--FHPDGRTLFSGFDDNLKVYSWE 255
HA++ + DG+TLF+G+ DN+ + W+
Sbjct: 288 HAVSLAWSADGQTLFAGYTDNV-IRVWQ 314
Score = 216 (81.1 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 67/274 (24%), Positives = 119/274 (43%)
Query: 35 GDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVR 94
GDDQK G P + S G S V + L+ + ++LWD+ + +
Sbjct: 49 GDDQK-----FGVP--VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQ 101
Query: 95 TLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTP-- 152
GHKS+ +V+ SG D +K+W I+ + C+ T GH ++ +R P
Sbjct: 102 RFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ-CLATLLGHNDWVSQVRVVPNE 160
Query: 153 ----DGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTV 208
D ++S G D +VK W+L ++ DF H +I ++ P L+A+ D +
Sbjct: 161 KADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEI 220
Query: 209 KFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVICHDSVD---M 265
W+L + + + + V ++ F P+ L + +KV+S +P D +
Sbjct: 221 MLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFA 279
Query: 266 GWSTLGD-----LCIN-DGKLLGCSFYRNSVGIW 293
G+S + L + DG+ L + N + +W
Sbjct: 280 GYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVW 313
Score = 150 (57.9 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 34/127 (26%), Positives = 61/127 (48%)
Query: 95 TLTGHKSNCTAVEFHPFGE--FFASGCMDTNLKIW----DIRKKGC-IHTYKGHTRGINT 147
TL GH T++ G+ S D L W D +K G + ++KGH+ +
Sbjct: 12 TLEGHNGWVTSLATSA-GQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQD 70
Query: 148 IRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRT 207
T DG + +S +D +++WD+ G+ F H+ + S+D ++ +GS D+T
Sbjct: 71 CTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKT 130
Query: 208 VKFWDLE 214
+K W ++
Sbjct: 131 IKVWTIK 137
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 255 (94.8 bits), Expect = 9.1e-19, P = 9.1e-19
Identities = 73/294 (24%), Positives = 122/294 (41%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAE 70
F H + ++ + TGG D K LW IG L G V +AF
Sbjct: 66 FTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDG 125
Query: 71 VLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
L+ +G GV++++D + L G + V +HP G +G D +L +W+
Sbjct: 126 QLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNAD 185
Query: 131 KKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGH---I 187
K+ ++ + GH + FTPDG+ + +G D + VW+ + +H K H H +
Sbjct: 186 KEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGL 245
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTL----FS 243
+D + L +GS D +V ++ T +++ S V + F P T+
Sbjct: 246 TCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATG 305
Query: 244 GFDDNLKVYSWE---P-VICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIW 293
G D L ++ + P IC + G ++L I K L +V IW
Sbjct: 306 GMDKKLIIWDLQHSTPRFICEH--EEGVTSL--TWIGTSKYLATGCANGTVSIW 355
Score = 177 (67.4 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 54/203 (26%), Positives = 83/203 (40%)
Query: 88 EESKMVRTLTGHKSNCTAVEFHPF-GEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGIN 146
E V T TGHK A+ P A+G D +W I GH ++
Sbjct: 58 ENDDSVHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVS 117
Query: 147 TIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADR 206
+ F+ DG+ + SGG D VV+++D ++G L I + +HP ++ GS D
Sbjct: 118 CLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDC 177
Query: 207 TVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVICHD-SVDM 265
++ W+ + + V F PDG+ + +G DD + W P C +
Sbjct: 178 SLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDD-ASLIVWNPKTCESIHIVK 236
Query: 266 G--WSTLGDLC--INDGKLLGCS 284
G + T G C IN L S
Sbjct: 237 GHPYHTEGLTCLDINSNSSLAIS 259
Score = 176 (67.0 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 41/160 (25%), Positives = 76/160 (47%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H+ + C+ I + I+G D V++ I + SL + V+ V F + +
Sbjct: 241 HTEGLTCLDINSNSS-LAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATI 299
Query: 74 LAGASTGVIK---LWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
A+ G+ K +WDL+ S R + H+ T++ + ++ A+GC + + IWD
Sbjct: 300 PLAATGGMDKKLIIWDLQHSTP-RFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSL 358
Query: 131 KKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
C+HTY GH + I + + ++VS DN +V++
Sbjct: 359 LGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFE 398
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 238 (88.8 bits), Expect = 9.8e-19, P = 9.8e-19
Identities = 73/263 (27%), Positives = 120/263 (45%)
Query: 13 AHSANVNCISIGKKA---CRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFD-S 68
AH + + GK + +I+G D V +W M + V+ D S
Sbjct: 14 AHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVS 73
Query: 69 AEVLVLAGASTGV-IKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIW 127
++A +S I+LWDLE K +R++ + +V F P + A+G + I+
Sbjct: 74 PSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIF 133
Query: 128 DIR--KKGCIHTYKGHTRG--INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
+ KK Y TRG I +I ++PDG+++ SG D ++ ++D+ GKLLH + H
Sbjct: 134 GVETGKK----EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 189
Query: 184 EGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPD-GRTLF 242
IRS+ F LL T S D +K +D++ L + + V + F PD +
Sbjct: 190 AMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVS 249
Query: 243 SGFDDNLKVYSWEPVIC-HDSVD 264
S D ++KV+ C H +D
Sbjct: 250 SSSDKSVKVWDVSARTCVHTFLD 272
Score = 220 (82.5 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 55/242 (22%), Positives = 108/242 (44%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD--SVAFDSAEV 71
H V + + + + D + LW + + S+ + PVD SVAF
Sbjct: 63 HQLGVVSVDVSPSG-NIMASSSLDAHIRLWDLESGKQIRSID--AGPVDAWSVAFSPDSQ 119
Query: 72 LVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRK 131
+ G+ G + ++ +E K +L ++ + P G++ ASG +D + I+DI
Sbjct: 120 HLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT 179
Query: 132 KGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSID 191
+HT +GH I ++ F+ D + +V+ D +K++D+ L H + ++
Sbjct: 180 GKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVA 239
Query: 192 FHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS-GFDDNLK 250
F P + + S+D++VK WD+ + + V + ++ +G + S G D +
Sbjct: 240 FSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIH 299
Query: 251 VY 252
VY
Sbjct: 300 VY 301
Score = 210 (79.0 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 41/142 (28%), Positives = 77/142 (54%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
++L +G D +N++ I L +L G + P+ S+ F + L++ + G IK++D++
Sbjct: 161 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQ 220
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ + TL+GH S V F P F S D ++K+WD+ + C+HT+ H + +
Sbjct: 221 HASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGV 280
Query: 149 RFTPDGRWVVSGGFDNVVKVWD 170
++ +G +VS G D + V+D
Sbjct: 281 KYNRNGSKIVSVGDDQEIHVYD 302
Score = 192 (72.6 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 45/182 (24%), Positives = 83/182 (45%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L TG KVN++ + SL + S+A+ + +GA G+I ++D+
Sbjct: 121 LATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG 180
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
K++ TL GH ++ F + + D +KI+D++ T GH + + F
Sbjct: 181 KLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAF 240
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
+PD VS D VKVWD++A +H F H+ + + ++ + + D+ +
Sbjct: 241 SPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHV 300
Query: 211 WD 212
+D
Sbjct: 301 YD 302
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 238 (88.8 bits), Expect = 9.8e-19, P = 9.8e-19
Identities = 62/203 (30%), Positives = 100/203 (49%)
Query: 74 LAGASTGVI--KLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRK 131
L G GV+ +LWDLE K ++++ + + F P ++ A+G + I+ + +
Sbjct: 60 LEGHQLGVVSVRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGV-E 118
Query: 132 KGCIHTYKGHTRG--INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
G Y TRG I +I ++PDG+++ SG D ++ ++D+ GKLLH + H IRS
Sbjct: 119 SGK-KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRS 177
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD-N 248
+ F P LL T S D +K +D++ L G+ + V + F PD S D +
Sbjct: 178 LTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKS 237
Query: 249 LKVYSWEPVIC-H---DSVDMGW 267
+KV+ C H D D W
Sbjct: 238 VKVWDVGTRTCVHTFFDHQDQVW 260
Score = 203 (76.5 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 40/142 (28%), Positives = 76/142 (53%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
++L +G D +N++ I L +L G + P+ S+ F L++ + G IK++D++
Sbjct: 143 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 202
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ + TL+GH S V F P F S D ++K+WD+ + C+HT+ H + +
Sbjct: 203 HANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGV 262
Query: 149 RFTPDGRWVVSGGFDNVVKVWD 170
++ +G +VS G D + ++D
Sbjct: 263 KYNGNGSKIVSVGDDQEIHIYD 284
Score = 136 (52.9 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 38/174 (21%), Positives = 78/174 (44%)
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
++++WD+ I + T+ F+PD +++ +G V ++ + +GK +
Sbjct: 69 SVRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT 128
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLF 242
I SI + P LA+G+ D + +D+ T +L+ + + ++TF PD + L
Sbjct: 129 RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLV 188
Query: 243 SGFDDN-LKVYSWEPVICHDSVD--MGWSTLGDLCINDGKLLGCSFYRNSVGIW 293
+ DD +K+Y + ++ W C +D + S + SV +W
Sbjct: 189 TASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDK-SVKVW 241
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 261 (96.9 bits), Expect = 9.9e-19, P = 9.9e-19
Identities = 52/202 (25%), Positives = 94/202 (46%)
Query: 12 VAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEV 71
+ H+ V +SI + F+++ +D LW+ + ++ G ++P+ V F
Sbjct: 400 IGHTRPVFGVSISPQK-EFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGY 458
Query: 72 LVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRK 131
+ +LWD+E + +R GH+++ V FHP + A+G D ++WD+R
Sbjct: 459 YFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRT 518
Query: 132 KGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSID 191
G + + H ++ + + DG + S ++KVWDL + F H + S+
Sbjct: 519 GGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLS 578
Query: 192 FHPLEFLLATGSADRTVKFWDL 213
F +L +G AD V FWDL
Sbjct: 579 FSYDNKILVSGGADTDVNFWDL 600
Score = 243 (90.6 bits), Expect = 8.9e-17, P = 8.9e-17
Identities = 59/250 (23%), Positives = 110/250 (44%)
Query: 18 VNCISIGKKACRFLITGGDDQKVNLWA---------IG---KPTALMSLCGLSSPVDSVA 65
VNC + A F + G D ++L++ +G +P SL G + PV V+
Sbjct: 352 VNCAAFSDDASMFAL-GCADSSIHLYSSTNNGPQPLVGSQNEPLQKSSLIGHTRPVFGVS 410
Query: 66 FDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLK 125
+ +L+ + G +LW + + GH + V+F PFG +FA+ D +
Sbjct: 411 ISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHDQTAR 470
Query: 126 IWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEG 185
+WD+ + + GH ++ + F P+ ++ +G D+ ++WD+ G + F H
Sbjct: 471 LWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHS 530
Query: 186 HIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF 245
+ ++ LA+ +K WDL + S + V++++F D + L SG
Sbjct: 531 PVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKILVSGG 590
Query: 246 DDNLKVYSWE 255
D V W+
Sbjct: 591 ADT-DVNFWD 599
Score = 180 (68.4 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 50/184 (27%), Positives = 80/184 (43%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
+ T DQ LW + L G + VD V+F + G+S ++WD+
Sbjct: 459 YFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRT 518
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
VR H S +A+ G AS +K+WD+R ++ H+ + ++
Sbjct: 519 GGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLS 578
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTA------GK---LLHDFKFHEGHIRSIDFHPLEFLLA 200
F+ D + +VSGG D V WDLT G+ LL +FK I+++ F + LA
Sbjct: 579 FSYDNKILVSGGADTDVNFWDLTYRNNLSDGEQSPLLFNFKTKNTIIQNLSFTRRNYCLA 638
Query: 201 TGSA 204
S+
Sbjct: 639 LSSS 642
Score = 157 (60.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 38/123 (30%), Positives = 59/123 (47%)
Query: 8 LQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFD 67
L+ FV H +V+C+S A +L TG D +W + + SPV ++
Sbjct: 480 LRVFVGHQNDVDCVSFHPNAA-YLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCM- 537
Query: 68 SAEVLVLAGAS-TGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKI 126
SA+ L LA A +G+IK+WDL S + H S ++ F + SG DT++
Sbjct: 538 SADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKILVSGGADTDVNF 597
Query: 127 WDI 129
WD+
Sbjct: 598 WDL 600
Score = 143 (55.4 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 47/208 (22%), Positives = 84/208 (40%)
Query: 102 NCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG---CIHTYK---------GHTRGINTIR 149
NC A F FA GC D+++ ++ G + + GHTR + +
Sbjct: 353 NCAA--FSDDASMFALGCADSSIHLYSSTNNGPQPLVGSQNEPLQKSSLIGHTRPVFGVS 410
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
+P +++S D ++W + + H I + F P + AT S D+T +
Sbjct: 411 ISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHDQTAR 470
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVICHDSV---DMG 266
WD+E + V ++FHP+ L +G D+ W+ V +V +
Sbjct: 471 LWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHT-TRMWD-VRTGGTVRVFNAH 528
Query: 267 WSTLGDLCIN-DGKLLGCSFYRNSVGIW 293
S + LC++ DG L + + +W
Sbjct: 529 HSPVSALCMSADGLSLASADESGIIKVW 556
>UNIPROTKB|Q7YR70 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9615 "Canis lupus familiaris" [GO:0014909 "smooth muscle
cell migration" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0010595 "positive regulation of endothelial cell
migration" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 CTD:14
GeneTree:ENSGT00690000102167 HOGENOM:HOG000261676
HOVERGEN:HBG061307 OMA:VWSFEVG OrthoDB:EOG4D26PX GO:GO:0001525
GO:GO:0010595 GO:GO:0014909 EMBL:AY197355 RefSeq:NP_001013872.1
UniGene:Cfa.8616 ProteinModelPortal:Q7YR70 STRING:Q7YR70
Ensembl:ENSCAFT00000023220 GeneID:478908 KEGG:cfa:478908
InParanoid:Q7YR70 NextBio:20854176 Uniprot:Q7YR70
Length = 435
Score = 255 (94.8 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 61/218 (27%), Positives = 97/218 (44%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAE 70
F HSA+V C+S+ K +TGG+D K +W + L G V F
Sbjct: 88 FALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDS 147
Query: 71 VLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
LV G +G++K+W ++ + V + + +E+HP +G D N +W +
Sbjct: 148 TLVATGDMSGLLKVWQVDTKEEVWSFEA--GDLEWMEWHPRAPVLLAGTADGNTWMWKVP 205
Query: 131 KKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGH---I 187
C T++G R PDG+ V G D +++WDL G +H K EGH +
Sbjct: 206 NGDC-KTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPL 264
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPE 225
+ + L+ TGS D + T +++G RPE
Sbjct: 265 TCVATNQDGSLILTGSVDCQAQLVSATTGKVVGVFRPE 302
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 259 (96.2 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 61/240 (25%), Positives = 113/240 (47%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
++L TG +DQ++ +W I + L G + S+ F +++G+ + LWD+E
Sbjct: 359 KYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVE 418
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ + + T V F P G+F A+G +D ++IW + GH + ++
Sbjct: 419 AGEQ-KLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVYSV 476
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTA------------GKLLHDFKFHEGHIRSIDFHPLE 196
F+PDG+++VSG DN +K+W+L G F H+ I S+ P
Sbjct: 477 AFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDG 536
Query: 197 FLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD-NLKVYSWE 255
+ +GS DRT++FW ++ + + V ++ P+G +G D +++S+E
Sbjct: 537 KWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIWSYE 596
Score = 238 (88.8 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 59/224 (26%), Positives = 100/224 (44%)
Query: 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
KR Y+L H + + K + L++G D+ V LW + + L V
Sbjct: 378 KRVYRL--LTGHEQEIYSLDFSKDG-KTLVSGSGDRTVCLWDVEAGEQKLIL-HTDDGVT 433
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
+V F + AG+ VI++W +V L GH+ + +V F P G++ SG +D
Sbjct: 434 TVMFSPDGQFIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDN 492
Query: 123 NLKIWDIR----------KKG--CIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
+K+W+++ K+G C T+ GH I ++ +PDG+W++SG D ++ W
Sbjct: 493 TIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWS 552
Query: 171 LTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLE 214
+ + H + S+ P ATGS D + W E
Sbjct: 553 PDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIWSYE 596
Score = 229 (85.7 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 63/223 (28%), Positives = 106/223 (47%)
Query: 58 SSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSN------CTAVEFHPF 111
+S + V F SA+ LA ++++E K++ L S +V F P
Sbjct: 299 TSVICYVRF-SADGKFLATGCNRAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSPD 357
Query: 112 GEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDL 171
G++ A+G D ++IWDI +K GH + I ++ F+ DG+ +VSG D V +WD+
Sbjct: 358 GKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDV 417
Query: 172 TAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHA 231
AG+ +G + ++ F P +A GS D+ ++ W + L+ V++
Sbjct: 418 EAGEQKLILHTDDG-VTTVMFSPDGQFIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVYS 475
Query: 232 ITFHPDGRTLFSGFDDNLKVYSWEPVICHDSVDMGWSTLGDLC 274
+ F PDG+ L SG DN + WE + C +V G +C
Sbjct: 476 VAFSPDGKYLVSGSLDNT-IKLWE-LQCVSNVAPSMYKEGGIC 516
Score = 189 (71.6 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 60/222 (27%), Positives = 103/222 (46%)
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHT---RG--- 144
+++ TL H S V F G+F A+GC + ++++ I + + G
Sbjct: 291 QLLHTLE-HTSVICYVRFSADGKFLATGCNRAAM-VFNVETGKLITLLQEESSKREGDLY 348
Query: 145 INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSA 204
+ ++ F+PDG+++ +G D +++WD+ ++ HE I S+DF L +GS
Sbjct: 349 VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSG 408
Query: 205 DRTVKFWDLETFE--LIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEPVICHD 261
DRTV WD+E E LI T GV + F PDG+ + +G D +++++ +
Sbjct: 409 DRTVCLWDVEAGEQKLILHTDD---GVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQ 465
Query: 262 SVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVAD-VSHVEP 302
S DGK L N++ +W VS+V P
Sbjct: 466 LHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAP 507
Score = 152 (58.6 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 56/208 (26%), Positives = 101/208 (48%)
Query: 135 IHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLL----HDFKFHEG--HIR 188
+HT + HT I +RF+ DG+++ +G + V+++ GKL+ + EG ++R
Sbjct: 293 LHTLE-HTSVICYVRFSADGKFLATG-CNRAAMVFNVETGKLITLLQEESSKREGDLYVR 350
Query: 189 SIDFHPLEFLLATGSADRTVKFWDL---ETFELIGSTRPEVTGVHAITFHPDGRTLFSGF 245
S+ F P LATG D+ ++ WD+ + L+ E+ +++ F DG+TL SG
Sbjct: 351 SVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEI---YSLDFSKDGKTLVSGS 407
Query: 246 DDNLKVYSWE------PVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSH 299
D V W+ +I H D G +T+ + DG+ + + IW + +
Sbjct: 408 GDRT-VCLWDVEAGEQKLILH--TDDGVTTV--MFSPDGQFIAAGSLDKVIRIWTSSGTL 462
Query: 300 VEP-YGVGAPEPDQSICTEVKFNPPGSH 326
VE +G ++S+ + V F+P G +
Sbjct: 463 VEQLHG-----HEESVYS-VAFSPDGKY 484
>DICTYBASE|DDB_G0286735 [details] [associations]
symbol:DDB_G0286735 "C3HC4-type zinc
finger-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 dictyBase:DDB_G0286735 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000089
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 KO:K10646
RefSeq:XP_637649.1 ProteinModelPortal:Q54LB2
EnsemblProtists:DDB0187121 GeneID:8625789 KEGG:ddi:DDB_G0286735
InParanoid:Q54LB2 OMA:NTNIMIC ProtClustDB:CLSZ2430092
Uniprot:Q54LB2
Length = 694
Score = 260 (96.6 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 74/284 (26%), Positives = 137/284 (48%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAE 70
FV H+ + C+++ LI+G D KV +W + L G V ++A
Sbjct: 428 FVGHNGPIWCMTVTNG---MLISGSSDMKVKIWDLVTLKCKQVLSGHEGIVHTLAVIGNR 484
Query: 71 VLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
+ +G+S I++WDLE + + L + C V G F SG ++K+WD+
Sbjct: 485 LF--SGSSDQTIRVWDLETFECLSVLRDDNTVCALVI--AAGYLF-SGSFQ-HIKVWDLE 538
Query: 131 KKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSI 190
C+ T KG++ + + T G ++ SG + NVV+VWDL + + G I S+
Sbjct: 539 TFECVQTLKGNSHWVRAL--TVSGGYLYSGAY-NVVRVWDLANFECVQTIPGGSGSIYSL 595
Query: 191 DFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNL 249
LLA G+ + T+ W+L+TFE+I + V+ + + +SG +D +
Sbjct: 596 AVSNRR-LLA-GTYENTIVVWNLDTFEIINKLEGHIGAVYTLAV--SDKKFYSGSYDSTI 651
Query: 250 KVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIW 293
KV++ + ++C +++ S++ + ++ G + S NS+ +W
Sbjct: 652 KVWN-DSLVCVQTLNRHTSSVESIVVSSGCVFSGSA-DNSIKVW 693
Score = 165 (63.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 58/188 (30%), Positives = 94/188 (50%)
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
+LKI ++ KG T+ GH I + T +G ++SG D VK+WDL K
Sbjct: 416 DLKIPQLKCKG---TFVGHNGPIWCMTVT-NGM-LISGSSDMKVKIWDLVTLKCKQVLSG 470
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLF 242
HEG + ++ + L +GS+D+T++ WDLETFE + R + T V A+ LF
Sbjct: 471 HEGIVHTLAV--IGNRLFSGSSDQTIRVWDLETFECLSVLRDDNT-VCALVIAAG--YLF 525
Query: 243 SGFDDNLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIW-VADVSHVE 301
SG ++KV+ E C ++ + L ++ G L ++ N V +W +A+ V+
Sbjct: 526 SGSFQHIKVWDLETFECVQTLKGNSHWVRALTVSGGYLYSGAY--NVVRVWDLANFECVQ 583
Query: 302 --PYGVGA 307
P G G+
Sbjct: 584 TIPGGSGS 591
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 239 (89.2 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 67/254 (26%), Positives = 112/254 (44%)
Query: 13 AHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKP-----TALMSLCGLSSPVDSVAFD 67
AH+ V I+ +++ D+ + LW + K A L G S V+ V
Sbjct: 13 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLS 72
Query: 68 SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIW 127
S L+G+ G ++LWDL R GH + +V F S D +K+W
Sbjct: 73 SDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLW 132
Query: 128 DIRKKGCIHTY----KGHTRGINTIRFTPDGRW--VVSGGFDNVVKVWDLTAGKLLHDFK 181
+ + C +T +GH ++ +RF+P+ +VS +D VKVW+L+ KL
Sbjct: 133 NTLGE-CKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA 191
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTL 241
H G++ ++ P L A+G D V WDL + + S +HA+ F P+ L
Sbjct: 192 GHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSV-IHALCFSPNRYWL 250
Query: 242 FSGFDDNLKVYSWE 255
+ + +K++ E
Sbjct: 251 CAATEHGIKIWDLE 264
Score = 225 (84.3 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 69/240 (28%), Positives = 111/240 (46%)
Query: 67 DSAEVLVLAGASTGVIKLWDL-EESKMV----RTLTGHKSNCTAVEFHPFGEFFASGCMD 121
D+A+++V A +I LW L ++ K R LTGH V G+F SG D
Sbjct: 26 DNADIIVSASRDKSII-LWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD 84
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF- 180
L++WD+ + GHT+ + ++ F+ D R +VS D +K+W+ T G+ +
Sbjct: 85 GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWN-TLGECKYTIS 143
Query: 181 KFHEGH---IRSIDFHP--LEFLLATGSADRTVKFWDLETFELIGSTRPEVTG-VHAITF 234
+ EGH + + F P L+ + + S D+TVK W+L +L ST TG V +
Sbjct: 144 EGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL-RSTLAGHTGYVSTVAV 202
Query: 235 HPDGRTLFSGFDDNLKVYSWEPVICHDSVDM-GWSTLGDLCINDGKLLGCSFYRNSVGIW 293
PDG SG D + V W+ + S + LC + + C+ + + IW
Sbjct: 203 SPDGSLCASGGKDGV-VLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIW 261
Score = 223 (83.6 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 60/220 (27%), Positives = 100/220 (45%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G + HS V + + +F ++G D ++ LW + + G + V SV
Sbjct: 53 GVAQRRLTGHSHFVEDVVLSSDG-QFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSV 111
Query: 65 AFDSAEVLVLAGASTGVIKLWD-LEESKMVRTL--TGHKSNCTAVEFHP--FGEFFASGC 119
AF +++ + IKLW+ L E K + GH+ + V F P S
Sbjct: 112 AFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSAS 171
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
D +K+W++ T GHT ++T+ +PDG SGG D VV +WDL GK L+
Sbjct: 172 WDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYS 231
Query: 180 FKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELI 219
+ + I ++ F P + L + + +K WDLE+ ++
Sbjct: 232 LEANSV-IHALCFSPNRYWLCAAT-EHGIKIWDLESKSIV 269
Score = 161 (61.7 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 42/182 (23%), Positives = 90/182 (49%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLW-AIGKPTALMSLCGLSSP--V 61
G + FV H+ +V ++ R +++ D+ + LW +G+ +S G V
Sbjct: 95 GVSTRRFVGHTKDVLSVAFSLDN-RQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWV 153
Query: 62 DSVAF--DSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGC 119
V F ++ + +++ + +K+W+L K+ TL GH + V P G ASG
Sbjct: 154 SCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGG 213
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
D + +WD+ + +++ + ++ I+ + F+P+ W+ + ++ +K+WDL + ++ D
Sbjct: 214 KDGVVLLWDLAEGKKLYSLEANSV-IHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVED 271
Query: 180 FK 181
K
Sbjct: 272 LK 273
Score = 52 (23.4 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 221 STRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSW 254
+T+ +V ++ + DG TLFSG+ D + + W
Sbjct: 290 ATKRKVIYCTSLNWSADGSTLFSGYTDGV-IRVW 322
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 251 (93.4 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 62/240 (25%), Positives = 106/240 (44%)
Query: 43 WAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSN 102
W I +P SL G + + V F L+++ + I++WD E + R+L GH +
Sbjct: 94 W-IPRPPEKFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDS 152
Query: 103 CTAVEFHPFGEFFASGCMDTNLKIWDIRKK-GCIHTYKGHTRGINTIRFTPDGRWVVSGG 161
V F G+ AS D ++K+WD ++ CI T GH ++++ F P G +V+S
Sbjct: 153 VQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSAS 212
Query: 162 FDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGS 221
D +K+W++ G + + H +R + H + AT S D+T++ W + +
Sbjct: 213 RDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVE 272
Query: 222 TRPEVTGVHAITFHPDGRTLF---SGFDDNLKVYSWEPVICHDSVDMG---WSTLGDLCI 275
R V I + P+ + DN K + P + S D W LC+
Sbjct: 273 LRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCL 332
Score = 214 (80.4 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 52/184 (28%), Positives = 90/184 (48%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H A++ + I +++ +D + +W SL G + V VAFD A+ +
Sbjct: 107 HRASITRV-IFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFD-AQGKL 164
Query: 74 LAGASTGV-IKLWDLEES-KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRK 131
LA S + IKLWD ++S + ++T+ GH N ++V F P G++ S D +K+W++
Sbjct: 165 LASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVAT 224
Query: 132 KGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLH-DFKFHEGHIRSI 190
C+ TY GH + +R +G + D ++VW LT K + + HE + I
Sbjct: 225 GYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVW-LTNSKDCKVELRDHEHTVECI 283
Query: 191 DFHP 194
+ P
Sbjct: 284 AWAP 287
Score = 199 (75.1 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 37/104 (35%), Positives = 55/104 (52%)
Query: 109 HPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKV 168
H G F ASG D ++IWD+ C+ T GH + + F P G+++VS D ++V
Sbjct: 306 HHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRV 365
Query: 169 WDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
WDL + + H+ SIDFH + +GS D+TVK W+
Sbjct: 366 WDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
Score = 176 (67.0 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 37/128 (28%), Positives = 61/128 (47%)
Query: 43 WAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSN 102
WA P A S ++ D+ + +G+ I++WD+ + TL+GH +
Sbjct: 285 WA---PEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNW 341
Query: 103 CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGF 162
+ FHP G++ S D +++WD+R K C+ T H +I F +V+SG
Sbjct: 342 VRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSV 401
Query: 163 DNVVKVWD 170
D VKVW+
Sbjct: 402 DQTVKVWE 409
Score = 163 (62.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 28/101 (27%), Positives = 55/101 (54%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
FL +G D+ + +W + L++L G + V +AF +++ + I++WDL
Sbjct: 311 FLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRN 370
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
+ ++TL H+ CT+++FH + SG +D +K+W+ R
Sbjct: 371 KRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 131 (51.2 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 30/103 (29%), Positives = 49/103 (47%)
Query: 154 GRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDL 213
G ++ SG D +++WD++ G L H+ +R + FHP L + S D+T++ WDL
Sbjct: 309 GPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDL 368
Query: 214 ETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWE 255
+ + +I FH + SG D +KV WE
Sbjct: 369 RNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKV--WE 409
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 254 (94.5 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 46/183 (25%), Positives = 91/183 (49%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L++ +D + W + T + G + PV + + + + +LW + +
Sbjct: 357 LLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRT 416
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+R GH + V+FHP + A+G D +++W ++ + + GH + + F
Sbjct: 417 YPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAF 476
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
+P+G+++ S G D +K+WDL +G L + + H +I S+ F P L+A+ S D +V+
Sbjct: 477 SPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRV 536
Query: 211 WDL 213
WD+
Sbjct: 537 WDI 539
Score = 232 (86.7 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 56/223 (25%), Positives = 96/223 (43%)
Query: 49 TALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEF 108
T + L G PV S F S +L+ + I+ WDL GH ++
Sbjct: 333 TEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDI 392
Query: 109 HPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKV 168
P +FAS D ++W + + Y GH ++ ++F P+ ++ +G D V++
Sbjct: 393 SPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 169 WDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTG 228
W G + F H G + ++ F P LA+ D+ +K WDL + L R
Sbjct: 453 WSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDN 512
Query: 229 VHAITFHPDGRTLFSG-FDDNLKVYSWEPVICHDSVDMGWSTL 270
+ ++TF PD + S D++++V+ C+ D S L
Sbjct: 513 ITSLTFSPDSSLIASASMDNSVRVWDIRNTYCNAPADGSSSEL 555
Score = 220 (82.5 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 42/142 (29%), Positives = 67/142 (47%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
+ + D+ LW+ + L G VD V F + G++ ++LW ++
Sbjct: 398 YFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQ 457
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
VR TGH+ A+ F P G++ AS D LK+WD+ +GHT I ++
Sbjct: 458 GNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLT 517
Query: 150 FTPDGRWVVSGGFDNVVKVWDL 171
F+PD + S DN V+VWD+
Sbjct: 518 FSPDSSLIASASMDNSVRVWDI 539
Score = 198 (74.8 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 42/132 (31%), Positives = 67/132 (50%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
R Y L+ + H +V+C+ + +L TG D+ V LW+ + ++ G PV +
Sbjct: 415 RTYPLRIYAGHLLDVDCVKFHPNS-NYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLA 473
Query: 64 VAFD-SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
+AF + + L AG +KLWDL + + L GH N T++ F P AS MD
Sbjct: 474 LAFSPNGKYLASAGEDQR-LKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDN 532
Query: 123 NLKIWDIRKKGC 134
++++WDIR C
Sbjct: 533 SVRVWDIRNTYC 544
Score = 171 (65.3 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 49/206 (23%), Positives = 84/206 (40%)
Query: 93 VRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTP 152
++ L GH + F S D +++ WD+R Y+GH + + +P
Sbjct: 335 MKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISP 394
Query: 153 DGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSID---FHPLEFLLATGSADRTVK 209
+ S D ++W + + + GH+ +D FHP LATGS D+TV+
Sbjct: 395 CSLYFASASHDRTARLWSFDR---TYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVR 451
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS-GFDDNLKVYSWEPVICHDSVDMGWS 268
W + + V A+ F P+G+ L S G D LK++ + +
Sbjct: 452 LWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTD 511
Query: 269 TLGDLCIN-DGKLLGCSFYRNSVGIW 293
+ L + D L+ + NSV +W
Sbjct: 512 NITSLTFSPDSSLIASASMDNSVRVW 537
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 254 (94.5 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 70/271 (25%), Positives = 126/271 (46%)
Query: 7 KLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLW--AIGKPTALMSLCGLSSPVD-- 62
+L + H + V C+ + ++L TG + + ++ +G+ A++ + D
Sbjct: 261 ELVHHLVHDSVVCCVRFSRDG-KYLATGCN-RSAQIFDVTLGQNVAVLQDESVDKSGDLY 318
Query: 63 --SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
SV F + GA I++WD+ + +GH+ + +++F G + ASG
Sbjct: 319 IRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSG 378
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
D +++WDI + ++T G+ T+ +PDG +V +G D V+VWD T G L+
Sbjct: 379 DKTVRLWDIAEGKLVYTLSIED-GVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERL 437
Query: 181 KFHEGH---IRSIDFHPLEFLLATGSADRTVKFWDL----ETFELIGS---TRPEVTG-- 228
+ +GH + S+ F P L +GS D+T+K W+L + + G G
Sbjct: 438 ENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHK 497
Query: 229 --VHAITFHPDGRTLFSGFDDNLKVYSWEPV 257
V ++ PDG + SG D V W+P+
Sbjct: 498 DFVLSVCLTPDGHWVMSGSKDR-GVQFWDPI 527
Score = 250 (93.1 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 62/215 (28%), Positives = 101/215 (46%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAE 70
F H ++ + R++ +G D+ V LW I + + +L + V +VA
Sbjct: 354 FSGHEQDIYSLDFAGNG-RYIASGSGDKTVRLWDIAEGKLVYTL-SIEDGVTTVAMSPDG 411
Query: 71 VLVLAGASTGVIKLWDLEESKMVRTLT---GHKSNCTAVEFHPFGEFFASGCMDTNLKIW 127
+ V AG+ +++WD +V L GHK + +V F P G+ SG +D +K+W
Sbjct: 412 LYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLW 471
Query: 128 DI---RK------KG--CIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKL 176
++ R+ KG C T++GH + ++ TPDG WV+SG D V+ WD G
Sbjct: 472 ELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNA 531
Query: 177 LHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFW 211
+ H+ + S+ P L ATGS D + W
Sbjct: 532 QMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIW 566
Score = 245 (91.3 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 61/240 (25%), Positives = 109/240 (45%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
++L TG +D+++ +W I T G + S+ F + +G+ ++LWD+
Sbjct: 329 KYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIA 388
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYK---GHTRGI 145
E K+V TL+ + T V P G + A+G +D +++WD + + GH +
Sbjct: 389 EGKLVYTLS-IEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSV 447
Query: 146 NTIRFTPDGRWVVSGGFDNVVKVWDLT-----------AGKLLHDFKFHEGHIRSIDFHP 194
++ F P+G+ +VSG D +K+W+L GK F+ H+ + S+ P
Sbjct: 448 YSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTP 507
Query: 195 LEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSW 254
+ +GS DR V+FWD T + V ++ P G +G D ++ W
Sbjct: 508 DGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNLFATGSGD-MRARIW 566
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 242 (90.2 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 64/253 (25%), Positives = 112/253 (44%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAI-GKPTALMSLCGLSSPVDSVAFDSAEVL 72
H V C L + G D+ + LW++ G +L G S V + +++ +
Sbjct: 66 HEGEVYCCKFHPNGST-LASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKS---NCTAVEFHPFGEFFASGCMDTNLKIWDI 129
+ + ++ + +WD E + V+ L GH S +C P + +G D +K+WDI
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP--QLVCTGSDDGTVKLWDI 182
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
RKK I T++ +T + + F ++SGG DN +KVWDL KL + + H +
Sbjct: 183 RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFE--------LIGSTRPEVTGVHAITFHPDGRTL 241
+ L + + D TV+ WD+ F G+ + ++ PDG +
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKI 301
Query: 242 FSGFDDNLKVYSW 254
+G D+ +Y W
Sbjct: 302 AAGSADSF-LYPW 313
Score = 225 (84.3 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 52/222 (23%), Positives = 107/222 (48%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
++ G +++ H++ VN ++ + + TG DD V LW I K A+ + + V
Sbjct: 139 SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN-TYQV 197
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
+V F+ +++G IK+WDL ++K+ T+ GH + T + G + S MD
Sbjct: 198 LAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD 257
Query: 122 TNLKIWDIR----KKGCIHTYKGHTRGI--NTIR--FTPDGRWVVSGGFDNVVKVWDLTA 173
+++WD+R K+ C+ ++G+ N +R ++PDG + +G D+ + W +
Sbjct: 258 NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPWHSLS 317
Query: 174 GKLLHDFKFHEGHIRSIDFHPLEFL-LATGSADRTVKFWDLE 214
+ L H + P E + + + S+D+ + +++
Sbjct: 318 VRSLGQIPRHRLSRQEDSVKPQEGIXILSASSDKRLYMGEIQ 359
Score = 193 (73.0 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 60/217 (27%), Positives = 94/217 (43%)
Query: 93 VRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIH--TYKGHTRGINTIRF 150
+ L+GH+ +FHP G AS D + +W + C + T KGH+ + + +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGD-CDNYATLKGHSGAVMELHY 118
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEF---LLATGSADRT 207
DG + S D V VWD G+ + K H + S +P L+ TGS D T
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC--YPARRGPQLVCTGSDDGT 176
Query: 208 VKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSW-EPVICHDSVDM 265
VK WD+ I T V A+TF+ + SG D+++KV+ + + +
Sbjct: 177 VKLWDIRKKAAI-QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGH 235
Query: 266 GWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHVEP 302
S G ++G L + N+V +W DV P
Sbjct: 236 ADSVTGLSLSSEGSYLLSNAMDNTVRVW--DVRPFAP 270
Score = 44 (20.5 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 585 IPQTRLSRNEDQAADVTPQTTLSSNED 611
IP+ RLSR ED LS++ D
Sbjct: 324 IPRHRLSRQEDSVKPQEGIXILSASSD 350
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 254 (94.5 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 51/186 (27%), Positives = 94/186 (50%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTG-VIKLWDLEE 89
L++ +D + W + T + G + PV + S L A AS +LW +
Sbjct: 354 LLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDI-SPHSLFFASASYDHTARLWSFDR 412
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
+ +R GH + V+FHP + A+G D +++W ++ + + GH + +
Sbjct: 413 TYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLA 472
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
F+P+G+++VS G D ++K+WDL +G L D H I S+ F ++A+ S D +V+
Sbjct: 473 FSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVR 532
Query: 210 FWDLET 215
WD+++
Sbjct: 533 IWDIKS 538
Score = 231 (86.4 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 59/228 (25%), Positives = 99/228 (43%)
Query: 54 LCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGE 113
L G PV S F +L+ + I+ WDLE GH ++ P
Sbjct: 335 LLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSL 394
Query: 114 FFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTA 173
FFAS D ++W + + Y GH G++ ++F P+ ++ +G D V++W
Sbjct: 395 FFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQ 454
Query: 174 GKLLHDFKFHEGHIRSIDFHPL-EFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAI 232
G + F H G +R + F P ++L++ G D+ +K WDL + L + ++
Sbjct: 455 GNSVRLFTGHCGPVRCLAFSPNGQYLVSAGE-DQLLKLWDLASGTLYKDLHGHTDDITSV 513
Query: 233 TFHPDGRTLFSGFDDNLKVYSWEPVICHDSVDMGWSTLGDLCINDGKL 280
TF D + S DN V W+ H+S S+ L + G++
Sbjct: 514 TFSLDSSVIASASMDN-SVRIWDIKSKHNSTPADGSSSELLGVYTGQM 560
Score = 194 (73.4 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 43/130 (33%), Positives = 67/130 (51%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
R Y L+ + H A V+C+ + +L TG D+ V LW+ + ++ G PV
Sbjct: 412 RTYPLRIYAGHLAGVDCVKFHPNS-NYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRC 470
Query: 64 VAFD-SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
+AF + + LV AG ++KLWDL + + L GH + T+V F AS MD
Sbjct: 471 LAFSPNGQYLVSAGEDQ-LLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDN 529
Query: 123 NLKIWDIRKK 132
+++IWDI+ K
Sbjct: 530 SVRIWDIKSK 539
Score = 192 (72.6 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 39/142 (27%), Positives = 62/142 (43%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
F + D LW+ + L G + VD V F + G++ ++LW ++
Sbjct: 395 FFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQ 454
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
VR TGH + F P G++ S D LK+WD+ GHT I ++
Sbjct: 455 GNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVT 514
Query: 150 FTPDGRWVVSGGFDNVVKVWDL 171
F+ D + S DN V++WD+
Sbjct: 515 FSLDSSVIASASMDNSVRIWDI 536
Score = 182 (69.1 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 49/211 (23%), Positives = 86/211 (40%)
Query: 94 RTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPD 153
+ L GH + F P S DT+++ WD+ Y+GH + + +P
Sbjct: 333 KVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPH 392
Query: 154 GRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSID---FHPLEFLLATGSADRTVKF 210
+ S +D+ ++W + + + GH+ +D FHP LATGS D+TV+
Sbjct: 393 SLFFASASYDHTARLWSFDR---TYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRL 449
Query: 211 WDLETFELIGSTRPEVTGVHAITFHPDGRTLFS-GFDDNLKVYSWEPVICHDSVDMGWST 269
W + + V + F P+G+ L S G D LK++ + +
Sbjct: 450 WSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDD 509
Query: 270 LGDLCIN-DGKLLGCSFYRNSVGIWVADVSH 299
+ + + D ++ + NSV IW H
Sbjct: 510 ITSVTFSLDSSVIASASMDNSVRIWDIKSKH 540
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 252 (93.8 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 65/240 (27%), Positives = 111/240 (46%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAF--------DSAEVLVLAGASTGVI 82
++T G V +W + + G SS F D + + V++ + G +
Sbjct: 219 IVTAGWSGSVAVWKREQCAQEIKFIGHSSQAGCARFHPGAFTQNDYSSLNVVSCSYDGTV 278
Query: 83 KLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHT 142
LW L + + L H + V FHP G A+ C D+ +++D+ K + +GH+
Sbjct: 279 LLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKKELLYQEGHS 338
Query: 143 RGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATG 202
+ + + F PDG ++GG D +VWD+ G+ + H I S+++ P + + TG
Sbjct: 339 KSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEMITG 398
Query: 203 SADRTVKFWDLETFELIGSTRPEVTGVHA-ITFHPDGRTLFSG-FDDNLKVYS---WEPV 257
S+D ++K WDL T P T V + G+ L S FD LK++S W+P+
Sbjct: 399 SSDNSMKVWDLR-MRRNTYTMPAHTSVVTRVRADAAGQYLVSASFDCTLKMWSTTGWQPL 457
Score = 225 (84.3 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 64/261 (24%), Positives = 111/261 (42%)
Query: 3 KRGYKLQE--FVAHSANVNCISIGKKACRF-------LITGGDDQKVNLWAIGKPTALMS 53
KR QE F+ HS+ C A +++ D V LW++ + + +
Sbjct: 232 KREQCAQEIKFIGHSSQAGCARFHPGAFTQNDYSSLNVVSCSYDGTVLLWSLSQESPIGE 291
Query: 54 LCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGE 113
L V VAF + +++DL K + GH + V FHP G
Sbjct: 292 LEQHPQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGS 351
Query: 114 FFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTA 173
+G D ++WD+R CI GHT+ I+++ + P+G +++G DN +KVWDL
Sbjct: 352 VALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRM 411
Query: 174 GKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAIT 233
+ + H + + L + S D T+K W ++ + + T + +
Sbjct: 412 RRNTYTMPAHTSVVTRVRADAAGQYLVSASFDCTLKMWSTTGWQPLRQLQGHDTRILCVD 471
Query: 234 FHPDGRTLFSG-FDDNLKVYS 253
PDG+ + S FD K+++
Sbjct: 472 ISPDGQWMCSSAFDRTFKLWA 492
Score = 196 (74.1 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 57/207 (27%), Positives = 98/207 (47%)
Query: 60 PVDSVAFDS-AEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEF---- 114
PV F + +E +V AG S G + +W E+ GH S FHP G F
Sbjct: 206 PVAFCEFSADSEHIVTAGWS-GSVAVWKREQCAQEIKFIGHSSQAGCARFHP-GAFTQND 263
Query: 115 FAS----GCM-DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVW 169
++S C D + +W + ++ I + H + ++ + F P+G + + FD+ +++
Sbjct: 264 YSSLNVVSCSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRMY 323
Query: 170 DLTAGKLLHDFKFHEGHIRSI-D--FHPLEFLLATGSADRTVKFWDLETFELIGSTRPEV 226
DLT K + + EGH +S+ D FHP + TG D + WD+ T I
Sbjct: 324 DLTTKK---ELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHT 380
Query: 227 TGVHAITFHPDGRTLFSGFDDN-LKVY 252
+H++ + P+G + +G DN +KV+
Sbjct: 381 KEIHSVEWMPNGYEMITGSSDNSMKVW 407
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 254 (94.5 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 64/244 (26%), Positives = 115/244 (47%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H + + KK +L+TG D+ +W + S P V + + V
Sbjct: 364 HKGPIFSLKWNKKG-DYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRN-NVSF 421
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
++ +I L + E++ +T TGH+ V++ P G AS D+ KIW+I++
Sbjct: 422 ATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQST 481
Query: 134 CIHTYKGHTRGINTIRFTPDGRW---------VVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
+H + HT+ I TIR++P G + S FD+ VK+WD GK+L F H
Sbjct: 482 FVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHR 541
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG 244
+ S+ F P +A+GS D+++ W ++ +++ T G+ + ++ +G + +
Sbjct: 542 EPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIV-KTYTGNGGIFEVCWNKEGNKIAAC 600
Query: 245 FDDN 248
F DN
Sbjct: 601 FADN 604
Score = 180 (68.4 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 48/169 (28%), Positives = 78/169 (46%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSA- 69
F H VNC+ L + DD +W I + T + L + + ++ +
Sbjct: 444 FTGHQGEVNCVKWDPTGS-LLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTG 502
Query: 70 -------EVLVLAGAS-TGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMD 121
+ L LA AS +KLWD E KM+ + GH+ ++ F P GE+ ASG +D
Sbjct: 503 PGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLD 562
Query: 122 TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
++ IW I++ + TY G+ GI + + +G + + DN V V D
Sbjct: 563 KSIHIWSIKEGKIVKTYTGNG-GIFEVCWNKEGNKIAACFADNSVCVLD 610
Score = 165 (63.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 74/305 (24%), Positives = 127/305 (41%)
Query: 56 GLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTG---------H---KSN- 102
G +S V + A+ + L+ +G+ ++W + E TG H KSN
Sbjct: 263 GHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKSNE 322
Query: 103 ----CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVV 158
T ++++ G A+G D +IW + + I T H I ++++ G +++
Sbjct: 323 KSKDVTTLDWNGEGTLLATGSCDGQARIWTLNGE-LISTLSKHKGPIFSLKWNKKGDYLL 381
Query: 159 SGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFEL 218
+G D VWD+ A + F+FH G +D+ AT S D +
Sbjct: 382 TGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDSMIYLCK------ 434
Query: 219 IGSTRPE--VTG----VHAITFHPDGRTLFSGFDDNL-KVYSW-EPVICHDSVD------ 264
IG TRP TG V+ + + P G L S DD+ K+++ + HD +
Sbjct: 435 IGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIY 494
Query: 265 -MGWSTLGDLCINDGK--LLGCSFYRNSVGIWVADVSHVEPYGVGAPEPDQSICTEVKFN 321
+ WS G N K L + + ++V +W A++ + G EP S+ F+
Sbjct: 495 TIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLA----FS 550
Query: 322 PPGSH 326
P G +
Sbjct: 551 PNGEY 555
>CGD|CAL0005182 [details] [associations]
symbol:orf19.5413 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005182 GO:GO:0005737 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
GO:GO:0007049 EMBL:AACQ01000051 EMBL:AACQ01000050 KO:K12862
RefSeq:XP_717691.1 RefSeq:XP_717785.1 ProteinModelPortal:Q5A7Q3
STRING:Q5A7Q3 GeneID:3640515 GeneID:3640625 KEGG:cal:CaO19.12868
KEGG:cal:CaO19.5413 Uniprot:Q5A7Q3
Length = 389
Score = 247 (92.0 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 65/257 (25%), Positives = 114/257 (44%)
Query: 13 AHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVL 72
AH + I++ + ++ +TG D + +W + L G + S+
Sbjct: 83 AHQGWIRAIALDEITNKWYVTGSADSTIKIWDFENNSLKAVLTGHVLGIRSLCISKRHPY 142
Query: 73 VLAGASTGVIKLWDLEESK-----MVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIW 127
+ +G ++ WDLE S +R+ GH ++ HP + SG D +++W
Sbjct: 143 LFSGGEDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIGLHPELDVLFSGGKDCVVRVW 202
Query: 128 DIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHI 187
DIR + T GHT I +I + V++ D +++WDL K H I
Sbjct: 203 DIRSRVEAMTLLGHTNDITSIETDYNDPQVITSSMDGTIRLWDLRKSKTELLITNHSKSI 262
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLETFELI---GSTR--PEVTG----VHAITFHPDG 238
RS+ HP E +G ++ +K W L EL+ G+++ P ++ + +P
Sbjct: 263 RSMKSHPKEATFVSGDSNGEIKQWLLPKGELLNEFGTSQLSPNQRDNSRIINTLAINPVT 322
Query: 239 RTLFSGFDDN-LKVYSW 254
TLFSG+DD L+ Y++
Sbjct: 323 NTLFSGYDDGKLEFYNY 339
Score = 171 (65.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 52/222 (23%), Positives = 97/222 (43%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G +++ + H V I + + L +GG D V +W I M+L G ++ + S+
Sbjct: 165 GCQIRSYHGHLGGVYSIGLHPEL-DVLFSGGKDCVVRVWDIRSRVEAMTLLGHTNDITSI 223
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
D + V+ + G I+LWDL +SK +T H + +++ HP F SG + +
Sbjct: 224 ETDYNDPQVITSSMDGTIRLWDLRKSKTELLITNHSKSIRSMKSHPKEATFVSGDSNGEI 283
Query: 125 KIWDIRKKGCIHTY---------KGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGK 175
K W + K ++ + + ++R INT+ P + SG D ++ ++ T G
Sbjct: 284 KQWLLPKGELLNEFGTSQLSPNQRDNSRIINTLAINPVTNTLFSGYDDGKLEFYNYTTGN 343
Query: 176 LLHDFKF------HEGHIRSIDFHPLEFLLATGSADRTVKFW 211
L + + I + F L T D++++ W
Sbjct: 344 LQQSGQSPSLAGPEQSAIYASTFDMSGLRLLTCHGDKSIRIW 385
>UNIPROTKB|Q5A7Q3 [details] [associations]
symbol:PRP46 "Pre-mRNA-splicing factor PRP46"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005182 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0005681 GO:GO:0007049 EMBL:AACQ01000051
EMBL:AACQ01000050 KO:K12862 RefSeq:XP_717691.1 RefSeq:XP_717785.1
ProteinModelPortal:Q5A7Q3 STRING:Q5A7Q3 GeneID:3640515
GeneID:3640625 KEGG:cal:CaO19.12868 KEGG:cal:CaO19.5413
Uniprot:Q5A7Q3
Length = 389
Score = 247 (92.0 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 65/257 (25%), Positives = 114/257 (44%)
Query: 13 AHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVL 72
AH + I++ + ++ +TG D + +W + L G + S+
Sbjct: 83 AHQGWIRAIALDEITNKWYVTGSADSTIKIWDFENNSLKAVLTGHVLGIRSLCISKRHPY 142
Query: 73 VLAGASTGVIKLWDLEESK-----MVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIW 127
+ +G ++ WDLE S +R+ GH ++ HP + SG D +++W
Sbjct: 143 LFSGGEDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIGLHPELDVLFSGGKDCVVRVW 202
Query: 128 DIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHI 187
DIR + T GHT I +I + V++ D +++WDL K H I
Sbjct: 203 DIRSRVEAMTLLGHTNDITSIETDYNDPQVITSSMDGTIRLWDLRKSKTELLITNHSKSI 262
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLETFELI---GSTR--PEVTG----VHAITFHPDG 238
RS+ HP E +G ++ +K W L EL+ G+++ P ++ + +P
Sbjct: 263 RSMKSHPKEATFVSGDSNGEIKQWLLPKGELLNEFGTSQLSPNQRDNSRIINTLAINPVT 322
Query: 239 RTLFSGFDDN-LKVYSW 254
TLFSG+DD L+ Y++
Sbjct: 323 NTLFSGYDDGKLEFYNY 339
Score = 171 (65.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 52/222 (23%), Positives = 97/222 (43%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G +++ + H V I + + L +GG D V +W I M+L G ++ + S+
Sbjct: 165 GCQIRSYHGHLGGVYSIGLHPEL-DVLFSGGKDCVVRVWDIRSRVEAMTLLGHTNDITSI 223
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
D + V+ + G I+LWDL +SK +T H + +++ HP F SG + +
Sbjct: 224 ETDYNDPQVITSSMDGTIRLWDLRKSKTELLITNHSKSIRSMKSHPKEATFVSGDSNGEI 283
Query: 125 KIWDIRKKGCIHTY---------KGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGK 175
K W + K ++ + + ++R INT+ P + SG D ++ ++ T G
Sbjct: 284 KQWLLPKGELLNEFGTSQLSPNQRDNSRIINTLAINPVTNTLFSGYDDGKLEFYNYTTGN 343
Query: 176 LLHDFKF------HEGHIRSIDFHPLEFLLATGSADRTVKFW 211
L + + I + F L T D++++ W
Sbjct: 344 LQQSGQSPSLAGPEQSAIYASTFDMSGLRLLTCHGDKSIRIW 385
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 258 (95.9 bits), Expect = 6.0e-18, Sum P(2) = 6.0e-18
Identities = 63/258 (24%), Positives = 115/258 (44%)
Query: 10 EFVAHSANVNCISIGKKACRFLITGGDDQKVNLW---AIGKPTALMSLCGLSSPVDSVAF 66
+FV H V C+ + + G D+++ LW K + + + CG + S++F
Sbjct: 84 KFVGHKGAVYCVKYSPDG-ETIASCGQDRQIRLWQNTVQSKCSIIKAHCGA---IRSMSF 139
Query: 67 DSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKI 126
+ +L+ + +KLW L++ K + + GHK+ + P ASG D + +
Sbjct: 140 SADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVML 199
Query: 127 WDIR---------------KKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDL 171
WD+ K I++Y H ++ + F PDG ++S FD+ +K+ D+
Sbjct: 200 WDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDI 259
Query: 172 TAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHA 231
+ KL+ + H+ + SI HP + LA+ +D +K WDL I + +
Sbjct: 260 RSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITT 319
Query: 232 ITFHPDGRTLFSGFDDNL 249
+ F+ G +G NL
Sbjct: 320 VQFNQSGDYFATGGSQNL 337
Score = 212 (79.7 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 57/214 (26%), Positives = 90/214 (42%)
Query: 13 AHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVL 72
AH + +S +L++ DD+ + LW + + S G + V S L
Sbjct: 129 AHCGAIRSMSFSADG-GYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRL 187
Query: 73 VLAGASTGVIKLWDLEESKMVR---TL------------TGHKSNCTAVEFHPFGEFFAS 117
V +G+ + LWDL K+V TL + H + V FHP G S
Sbjct: 188 VASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLIS 247
Query: 118 GCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLL 177
D +KI DIR I Y H +N+I P G ++ S G D+ +K+WDL G+ +
Sbjct: 248 SSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQI 307
Query: 178 HDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFW 211
+ ++ I ++ F+ ATG + W
Sbjct: 308 YTLYSNDKDITTVQFNQSGDYFATGGSQNLCMVW 341
Score = 209 (78.6 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 57/220 (25%), Positives = 98/220 (44%)
Query: 48 PTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVE 107
P S G + FD V + + ++ +W+ + + GHK V+
Sbjct: 37 PALSRSFRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVK 96
Query: 108 FHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVK 167
+ P GE AS D +++W + K H I ++ F+ DG +++S D +K
Sbjct: 97 YSPDGETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSSDDKTLK 156
Query: 168 VWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIG--STRPE 225
+W L K + F H+ +RS P L+A+GS D+TV WDL +++ ST +
Sbjct: 157 LWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDD 216
Query: 226 ---VTGVHA----------ITFHPDGRTLFSG-FDDNLKV 251
++ +++ + FHPDG L S FD +K+
Sbjct: 217 NVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKI 256
Score = 191 (72.3 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 51/199 (25%), Positives = 88/199 (44%)
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
L S+ + + + + R+ GH+ T +F P AS D+ + +W+ + +
Sbjct: 21 LGNTSSKITEQQTTHDPALSRSFRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQ 80
Query: 134 CIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFH 193
+ GH + ++++PDG + S G D +++W T K H G IRS+ F
Sbjct: 81 RPFKFVGHKGAVYCVKYSPDGETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFS 140
Query: 194 PLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYS 253
L + S D+T+K W L+ + + S V + PD R + SG DD V
Sbjct: 141 ADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKT-VML 199
Query: 254 WEPVICHDSVDMGWSTLGD 272
W+ + + +STL D
Sbjct: 200 WD--LNFQKIVSKYSTLDD 216
Score = 45 (20.9 bits), Expect = 6.0e-18, Sum P(2) = 6.0e-18
Identities = 34/155 (21%), Positives = 52/155 (33%)
Query: 735 SRNQDQATNITSHMGLNSNENRATNIPSRSRLNSREDQSTNTPSQTIVNGAENKATKTPT 794
+R D+ N H SN + + +LN E+Q P IV N T
Sbjct: 407 NRGDDELNNGRVHENKQSNSPTFSQQQQQQQLNLSENQY---PGLEIVGNQFNLQQST-- 461
Query: 795 QMRLKSSENQVTSTPPRARLNSSIEGQATNIPIR--RRFNRNVDQTTNVTRHRRSISNTD 852
L ++ NQ + N SI IP F ++ Q ++ + + N
Sbjct: 462 ---LSNNNNQNNLIKSQ---NDSIVSNKNAIPFHPSSEFQQSAVQQ-QFSQQPKLVVNNG 514
Query: 853 QATSTTAHVAVKNNDDIATVITPHVTALSYERTST 887
AT + V ++I T Y R T
Sbjct: 515 TATYPSNFVPKVEEENIMTEAIAASMQQIYSRLDT 549
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 253 (94.1 bits), Expect = 6.5e-18, P = 6.5e-18
Identities = 79/257 (30%), Positives = 124/257 (48%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAI-G---KPTALMSLCGLSSPVDSVAF 66
F AH VN + + R L TGG D++V LW + G +P SL G ++ + S+ F
Sbjct: 318 FDAHDGEVNAVQFSPGS-RLLATGGMDRRVKLWEVLGDRCEPKG--SLSGSNAGITSIEF 374
Query: 67 DSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKI 126
DSA +LA ++ ++W ++++++ TLTGH + +F SG D LK+
Sbjct: 375 DSAGSYLLAASNDFASRIWTVDDNRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKL 434
Query: 127 WDIRKKGC-IHT-YKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
WD+R K C I T + G + N I T + V+SG FD ++ WD+ ++ + +
Sbjct: 435 WDLRSKVCNIKTVFAGSS--CNDIVCTE--QCVMSGHFDKKIRFWDIRTESIVKELELL- 489
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWDL------ETFELIG-STRPEVTGVHAITFHPD 237
G I ++D + L T S D +K DL +TF G + T V F PD
Sbjct: 490 GRITALDLNSERTELLTCSRDDLLKIIDLRVGAVKQTFSAQGFKCGSDWTRV---VFSPD 546
Query: 238 GRTLFSGFDDNLKVYSW 254
G + +G D +Y W
Sbjct: 547 GNYVAAGSADGA-LYVW 562
Score = 180 (68.4 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 51/207 (24%), Positives = 95/207 (45%)
Query: 49 TALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDL--EESKMVRTLTGHKSNCTAV 106
TA+ V++V F L+ G +KLW++ + + +L+G + T++
Sbjct: 313 TAICVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVLGDRCEPKGSLSGSNAGITSI 372
Query: 107 EFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVV 166
EF G + + D +IW + HT GH+ + + +F D +VSG D +
Sbjct: 373 EFDSAGSYLLAASNDFASRIWTVDDNRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTL 432
Query: 167 KVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEV 226
K+WDL + K+ + G + D E + +G D+ ++FWD+ T ++ E+
Sbjct: 433 KLWDLRS-KVCNIKTVFAGSSCN-DIVCTEQCVMSGHFDKKIRFWDIRTESIVKEL--EL 488
Query: 227 TG-VHAITFHPDGRTLFS-GFDDNLKV 251
G + A+ + + L + DD LK+
Sbjct: 489 LGRITALDLNSERTELLTCSRDDLLKI 515
Score = 137 (53.3 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 58/246 (23%), Positives = 104/246 (42%)
Query: 16 ANVNCISIG-KKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVL 74
+N SI A +L+ +D +W + +L G S V S F ++
Sbjct: 365 SNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTLTGHSGKVLSAKFLLDNARIV 424
Query: 75 AGASTGVIKLWDLEESKMVRTLTGHK-SNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
+G+ +KLWDL SK+ T S+C + + SG D ++ WDIR +
Sbjct: 425 SGSHDRTLKLWDLR-SKVCNIKTVFAGSSCNDIVCTE--QCVMSGHFDKKIRFWDIRTES 481
Query: 134 CIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK---FHEGHIRS- 189
+ + R I + + +++ D+++K+ DL G + F F G +
Sbjct: 482 IVKELELLGR-ITALDLNSERTELLTCSRDDLLKIIDLRVGAVKQTFSAQGFKCGSDWTR 540
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFELIGS-TRPEVTGVHAITFHPDGRTLFSGFDDN 248
+ F P +A GSAD + W++ T +L + + + ++A+ + P G + S D
Sbjct: 541 VVFSPDGNYVAAGSADGALYVWNVLTGKLERTLAKHHSSPINAVAWSPAGAHVVS-VDKG 599
Query: 249 LKVYSW 254
K W
Sbjct: 600 NKAVLW 605
Score = 124 (48.7 bits), Expect = 0.00062, P = 0.00062
Identities = 44/177 (24%), Positives = 79/177 (44%)
Query: 4 RGYKLQEFVAHSANVNCISIGKKA----C--RFLITGGDDQKVNLWAIGKPTALMSLCGL 57
R KL + + N+ + G C + +++G D+K+ W I + + L L
Sbjct: 430 RTLKLWDLRSKVCNIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRTESIVKEL-EL 488
Query: 58 SSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLT--GHK--SNCTAVEFHPFGE 113
+ ++ +S +L + ++K+ DL + +T + G K S+ T V F P G
Sbjct: 489 LGRITALDLNSERTELLTCSRDDLLKIIDLRVGAVKQTFSAQGFKCGSDWTRVVFSPDGN 548
Query: 114 FFASGCMDTNLKIWDIRKKGCIHTY-KGHTRGINTIRFTPDGRWVVSGGFDNVVKVW 169
+ A+G D L +W++ T K H+ IN + ++P G VVS N +W
Sbjct: 549 YVAAGSADGALYVWNVLTGKLERTLAKHHSSPINAVAWSPAGAHVVSVDKGNKAVLW 605
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 229 (85.7 bits), Expect = 9.0e-18, Sum P(2) = 9.0e-18
Identities = 52/164 (31%), Positives = 73/164 (44%)
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ + +L H +F P G S D +KIWD K C++ + N + F
Sbjct: 5 RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDF 64
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKF 210
P G + S G D VKVWD+ KLL ++ H G + I FHP L T S+D T+K
Sbjct: 65 NPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKI 124
Query: 211 WDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSW 254
DL LI + + V ++F G SG D +V W
Sbjct: 125 LDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADT-QVLLW 167
Score = 219 (82.2 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 46/161 (28%), Positives = 79/161 (49%)
Query: 72 LVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRK 131
L+++ + IK+WD + V + V+F+P G AS D +K+WD+R
Sbjct: 28 LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRV 87
Query: 132 KGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSID 191
+ Y+ H+ G+N I F P G ++++ D +K+ DL G+L++ + H G + ++
Sbjct: 88 NKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS 147
Query: 192 FHPLEFLLATGSADRTVKFWDLETFELI--GSTRPEVTGVH 230
F L A+G AD V W EL G T+ + +H
Sbjct: 148 FSKGGELFASGGADTQVLLWRTNFDELHCKGLTKRNLKRLH 188
Score = 183 (69.5 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 38/162 (23%), Positives = 71/162 (43%)
Query: 8 LQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFD 67
L H+ V C R +++ +D+ + +W + + + V F+
Sbjct: 7 LYSLYRHTHWVRCAKFSPDG-RLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFN 65
Query: 68 SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIW 127
+ + + S +K+WD+ +K+++ H + FHP G + + D LKI
Sbjct: 66 PSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKIL 125
Query: 128 DIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVW 169
D+ + I+T +GHT + T+ F+ G SGG D V +W
Sbjct: 126 DLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 167
Score = 56 (24.8 bits), Expect = 9.0e-18, Sum P(2) = 9.0e-18
Identities = 20/88 (22%), Positives = 40/88 (45%)
Query: 599 DVTPQTTLSSNEDHVANVTSQTRLNGNEYQAATAPQQTRLSSNIDPVANVTPQTLPSGNE 658
D+ P+T +E+ V V +L + Q +T P LS + + +TLP E
Sbjct: 197 DIYPRTP-HPHEEKVETVEINPKLEVIDLQISTPPVMDILSFDSTTTTETSGRTLPDKGE 255
Query: 659 DQAA---N---VTPQTRPSSNEDQTANV 680
+ N ++P+ P++ + +T ++
Sbjct: 256 EACGYFLNPSLMSPECLPTTTKKKTEDM 283
>DICTYBASE|DDB_G0289501 [details] [associations]
symbol:cdc40 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0289501 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681
GenomeReviews:CM000154_GR GO:GO:0003676 EMBL:AAFI02000141
GO:GO:0000084 GO:GO:0000398 KO:K12816 OMA:KRQKRGK
RefSeq:XP_636182.1 ProteinModelPortal:Q54HF5 STRING:Q54HF5
EnsemblProtists:DDB0233421 GeneID:8627169 KEGG:ddi:DDB_G0289501
InParanoid:Q54HF5 ProtClustDB:CLSZ2429764 Uniprot:Q54HF5
Length = 595
Score = 249 (92.7 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 65/215 (30%), Positives = 104/215 (48%)
Query: 91 KMVRTLTGHKSNCTAVEFHP-FGEFFASGCMDTNLKIWDIR-KKGCIHTYKGHTRGINTI 148
K++ TGH A+ + P +G S MD +KIWD + CI TY GH++ + I
Sbjct: 295 KLIHNYTGHTKGVAAIRYIPKYGHLLLSAGMDNTVKIWDAYGDRRCIQTYMGHSQAVRDI 354
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIR-SIDFHP----LEFLLATGS 203
F+ DGR +S G+D ++WD GK+L F G I I F+P E L GS
Sbjct: 355 CFSNDGRRFLSCGYDRQTRLWDTETGKILSSFT--NGKIPYCIKFNPDDDKQEQFLCGGS 412
Query: 204 ADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD-NLKVYSWE-PVICHD 261
D+ + WD+++ +++ + V+ ITF D R + DD +L+V+ W PV+
Sbjct: 413 -DKKIIQWDIKSNQIVQEYDQHLGAVNTITFLDDNRRFVTSSDDKSLRVWDWGIPVVIKY 471
Query: 262 SVDMGWSTLGDLCIND-GKLLGCSFYRNSVGIWVA 295
D ++ + ++ GK N + I+ A
Sbjct: 472 ISDPSMHSMPAVALHPKGKWFAAQSLDNQILIYSA 506
Score = 210 (79.0 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 76/307 (24%), Positives = 125/307 (40%)
Query: 8 LQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLW-AIGKPTALMSLCGLSSPVDSVAF 66
+ + H+ V I K L++ G D V +W A G + + G S V + F
Sbjct: 297 IHNYTGHTKGVAAIRYIPKYGHLLLSAGMDNTVKIWDAYGDRRCIQTYMGHSQAVRDICF 356
Query: 67 DSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHK-SNCTAVEFHPFG---EFFASGCMDT 122
+ L+ +LWD E K++ + T K C ++F+P E F G D
Sbjct: 357 SNDGRRFLSCGYDRQTRLWDTETGKILSSFTNGKIPYC--IKFNPDDDKQEQFLCGGSDK 414
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDL---TAGKLLHD 179
+ WDI+ + Y H +NTI F D R V+ D ++VWD K + D
Sbjct: 415 KIIQWDIKSNQIVQEYDQHLGAVNTITFLDDNRRFVTSSDDKSLRVWDWGIPVVIKYISD 474
Query: 180 FKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDL-ETFELIGSTR---PEVTGVHA-ITF 234
H + ++ HP A S D + + + F + R V+G + F
Sbjct: 475 PSMHS--MPAVALHPKGKWFAAQSLDNQILIYSARDRFRMNKKKRFLGHNVSGYACQLGF 532
Query: 235 HPDGRTLFSGFDDNLKVYSWE----PVI----CHDSVDMGWSTLGDLCINDGKLLGCSFY 286
PDG+ ++SG D K + W+ +I H++V +G + K+ CS +
Sbjct: 533 SPDGKFIYSG-DSTGKAFFWDWKTSKIIKTINAHNNVCIGIEWAP---LEPSKVATCS-W 587
Query: 287 RNSVGIW 293
N + +W
Sbjct: 588 NNEIKLW 594
Score = 162 (62.1 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 42/131 (32%), Positives = 64/131 (48%)
Query: 132 KGCIHTYKGHTRGINTIRFTPD-GRWVVSGGFDNVVKVWDLTAGK-LLHDFKFHEGHIRS 189
K IH Y GHT+G+ IR+ P G ++S G DN VK+WD + + + H +R
Sbjct: 294 KKLIHNYTGHTKGVAAIRYIPKYGHLLLSAGMDNTVKIWDAYGDRRCIQTYMGHSQAVRD 353
Query: 190 IDF-HPLEFLLATGSADRTVKFWDLETFELIGS-TRPEVTGVHAITFHPDG---RTLFSG 244
I F + L+ G DR + WD ET +++ S T ++ + I F+PD G
Sbjct: 354 ICFSNDGRRFLSCGY-DRQTRLWDTETGKILSSFTNGKIP--YCIKFNPDDDKQEQFLCG 410
Query: 245 FDDNLKVYSWE 255
D K+ W+
Sbjct: 411 GSDK-KIIQWD 420
Score = 152 (58.6 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 44/188 (23%), Positives = 83/188 (44%)
Query: 32 ITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESK 91
+ GG D+K+ W I + V+++ F + + +++WD
Sbjct: 408 LCGGSDKKIIQWDIKSNQIVQEYDQHLGAVNTITFLDDNRRFVTSSDDKSLRVWDWGIPV 467
Query: 92 MVRTLTGHKSNCT-AVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYK---GHT-RGIN 146
+++ ++ + AV HP G++FA+ +D + I+ R + ++ K GH G
Sbjct: 468 VIKYISDPSMHSMPAVALHPKGKWFAAQSLDNQILIYSARDRFRMNKKKRFLGHNVSGYA 527
Query: 147 T-IRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLE-FLLATGSA 204
+ F+PDG+++ SG WD K++ H I++ PLE +AT S
Sbjct: 528 CQLGFSPDGKFIYSGDSTGKAFFWDWKTSKIIKTINAHNNVCIGIEWAPLEPSKVATCSW 587
Query: 205 DRTVKFWD 212
+ +K WD
Sbjct: 588 NNEIKLWD 595
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 243 (90.6 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 53/239 (22%), Positives = 104/239 (43%)
Query: 9 QEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDS 68
+ F HS + + G + + T D V LW + + + S+PV+ VA+
Sbjct: 12 RHFTGHSGGITQLRFGPDGAQ-IATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSP 70
Query: 69 AEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWD 128
LV + +K+W+ + + H +V+F G + D + KIW
Sbjct: 71 KGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWR 130
Query: 129 IRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIR 188
+ ++ + ++ + + +F+P+G+ V + D V+++D+ +G+ + F R
Sbjct: 131 VARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPR 190
Query: 189 SIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD 247
+ +HP +LA +K +D+ +L+ V+ + FHP G L SG DD
Sbjct: 191 QLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDD 249
Score = 236 (88.1 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 51/210 (24%), Positives = 98/210 (46%)
Query: 10 EFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSA 69
EFVAHS V + ++T DD+ +W + + + S ++ V S F
Sbjct: 97 EFVAHSKAVRSVDFDSTG-HLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPN 155
Query: 70 EVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI 129
LV + ++++D++ + VRT T ++ + +HP+G A +KI+D+
Sbjct: 156 GKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFDV 215
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
+ Y H+ +N + F P G +++SG D +++ DL G+ ++ H + +
Sbjct: 216 SGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNA 275
Query: 190 IDFHPLEFLLATGSADRTVKFW--DLETFE 217
+ F ATG +DR + W +L T++
Sbjct: 276 VAFSRDGDKFATGGSDRQLLVWQSNLHTYD 305
Score = 232 (86.7 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 60/245 (24%), Positives = 107/245 (43%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAE 70
F +HSA VN ++ K + + G D+ V +W S V SV FDS
Sbjct: 56 FASHSAPVNGVAWSPKG-NLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTG 114
Query: 71 VLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR 130
L+L + K+W + + V + + + +F P G+ A+ D +++I+D+
Sbjct: 115 HLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVD 174
Query: 131 KKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSI 190
C+ T+ + + P G + N +K++D++ +LL + H + +
Sbjct: 175 SGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDV 234
Query: 191 DFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLK 250
FHP L +GS DRT++ DL I + V+A+ F DG +G D +
Sbjct: 235 AFHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDR-Q 293
Query: 251 VYSWE 255
+ W+
Sbjct: 294 LLVWQ 298
Score = 43 (20.2 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 459 SNSKYDAERLSTAAESESLNSKKSDLDSAVDPNVKTRFVSSD 500
++S ++ +S+ S SK +DL +DP + S+
Sbjct: 316 ASSSCESSGVSSKQSEGSSTSKSNDLSIRIDPRQSLAYQLSE 357
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 247 (92.0 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 63/235 (26%), Positives = 109/235 (46%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H + + KK F+++ G D+ +W A S+P V + S
Sbjct: 265 HKGPIFALKWNKKG-NFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF- 322
Query: 74 LAGASTGV-IKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
A ST + I + L + + ++T GH + A+++ P G AS D LKIW +++
Sbjct: 323 -ASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQD 381
Query: 133 GCIHTYKGHTRGINTIRFTPDGR---------WVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
C+H + H + I TI+++P G + S FD+ V++WD+ G +H H
Sbjct: 382 NCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKH 441
Query: 184 EGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDG 238
+ + S+ F P LA+GS D+ V W+ +T L+ S R G+ + ++ G
Sbjct: 442 QEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAG 495
Score = 215 (80.7 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 50/221 (22%), Positives = 104/221 (47%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A G Q+F HSA + + ++ + D +++ +G+ + + G ++ V
Sbjct: 295 AHTGEAKQQFPFHSAPA--LDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEV 352
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGE-------- 113
+++ +D L+ + + +K+W +++ V L H +++ P G
Sbjct: 353 NAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNAN 412
Query: 114 -FFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLT 172
AS D+ +++WD+ + CIHT H + ++ F+PDGR++ SG FD V +W+
Sbjct: 413 LMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQ 472
Query: 173 AGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDL 213
G L+H ++ G I + ++ + ++D +V DL
Sbjct: 473 TGALVHSYR-GTGGIFEVCWNAAGDKVGASASDGSVCVLDL 512
Score = 213 (80.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 70/274 (25%), Positives = 119/274 (43%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGL-SSPVDSVAFDSAEVLVL-AGASTGVIKLWDLE 88
L TG D +W K L S G P+ ++ ++ +L AG I +WD
Sbjct: 240 LATGSYDGFARIWT--KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTI-IWDAH 296
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ + H + V++ FAS D + + + + I T++GHT +N I
Sbjct: 297 TGEAKQQFPFHSAPALDVDWQS-NNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAI 355
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL---------EFLL 199
++ P G + S D +K+W + +HD + H I +I + P +L
Sbjct: 356 KWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLML 415
Query: 200 ATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEP-V 257
A+ S D TV+ WD++ I + V+++ F PDGR L SG FD + +++ +
Sbjct: 416 ASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGA 475
Query: 258 ICHDSVDMGWSTLGDLCIND-GKLLGCSFYRNSV 290
+ H G + ++C N G +G S SV
Sbjct: 476 LVHSY--RGTGGIFEVCWNAAGDKVGASASDGSV 507
Score = 156 (60.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 58/231 (25%), Positives = 98/231 (42%)
Query: 48 PTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE---SKMVRTLTGH----- 99
P + L G S V A++ L+ +G+ ++W+L E S + + H
Sbjct: 159 PNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREG 218
Query: 100 ----KSN--CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRG-INTIRFTP 152
SN T+++++ G A+G D +IW K G + + G +G I +++
Sbjct: 219 GQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT--KDGNLASTLGQHKGPIFALKWNK 276
Query: 153 DGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
G +++S G D +WD G+ F FH +D+ A+ S D +
Sbjct: 277 KGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNN-TFASCSTDMCIHVCK 335
Query: 213 LETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD-NLKVYSWEPVIC-HD 261
L I + + V+AI + P G L S DD LK++S + C HD
Sbjct: 336 LGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHD 386
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 247 (92.0 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 63/235 (26%), Positives = 109/235 (46%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H + + KK F+++ G D+ +W A S+P V + S
Sbjct: 265 HKGPIFALKWNKKG-NFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF- 322
Query: 74 LAGASTGV-IKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
A ST + I + L + + ++T GH + A+++ P G AS D LKIW +++
Sbjct: 323 -ASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQD 381
Query: 133 GCIHTYKGHTRGINTIRFTPDGR---------WVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
C+H + H + I TI+++P G + S FD+ V++WD+ G +H H
Sbjct: 382 NCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKH 441
Query: 184 EGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDG 238
+ + S+ F P LA+GS D+ V W+ +T L+ S R G+ + ++ G
Sbjct: 442 QEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAG 495
Score = 215 (80.7 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 50/221 (22%), Positives = 104/221 (47%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A G Q+F HSA + + ++ + D +++ +G+ + + G ++ V
Sbjct: 295 AHTGEAKQQFPFHSAPA--LDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEV 352
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGE-------- 113
+++ +D L+ + + +K+W +++ V L H +++ P G
Sbjct: 353 NAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNAN 412
Query: 114 -FFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLT 172
AS D+ +++WD+ + CIHT H + ++ F+PDGR++ SG FD V +W+
Sbjct: 413 LMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQ 472
Query: 173 AGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDL 213
G L+H ++ G I + ++ + ++D +V DL
Sbjct: 473 TGALVHSYR-GTGGIFEVCWNAAGDKVGASASDGSVCVLDL 512
Score = 213 (80.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 70/274 (25%), Positives = 119/274 (43%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGL-SSPVDSVAFDSAEVLVL-AGASTGVIKLWDLE 88
L TG D +W K L S G P+ ++ ++ +L AG I +WD
Sbjct: 240 LATGSYDGFARIWT--KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTI-IWDAH 296
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ + H + V++ FAS D + + + + I T++GHT +N I
Sbjct: 297 TGEAKQQFPFHSAPALDVDWQS-NNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAI 355
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL---------EFLL 199
++ P G + S D +K+W + +HD + H I +I + P +L
Sbjct: 356 KWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLML 415
Query: 200 ATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEP-V 257
A+ S D TV+ WD++ I + V+++ F PDGR L SG FD + +++ +
Sbjct: 416 ASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGA 475
Query: 258 ICHDSVDMGWSTLGDLCIND-GKLLGCSFYRNSV 290
+ H G + ++C N G +G S SV
Sbjct: 476 LVHSY--RGTGGIFEVCWNAAGDKVGASASDGSV 507
Score = 156 (60.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 58/231 (25%), Positives = 98/231 (42%)
Query: 48 PTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE---SKMVRTLTGH----- 99
P + L G S V A++ L+ +G+ ++W+L E S + + H
Sbjct: 159 PNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREG 218
Query: 100 ----KSN--CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRG-INTIRFTP 152
SN T+++++ G A+G D +IW K G + + G +G I +++
Sbjct: 219 GQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT--KDGNLASTLGQHKGPIFALKWNK 276
Query: 153 DGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
G +++S G D +WD G+ F FH +D+ A+ S D +
Sbjct: 277 KGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNN-TFASCSTDMCIHVCK 335
Query: 213 LETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD-NLKVYSWEPVIC-HD 261
L I + + V+AI + P G L S DD LK++S + C HD
Sbjct: 336 LGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHD 386
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 247 (92.0 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 63/235 (26%), Positives = 109/235 (46%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H + + KK F+++ G D+ +W A S+P V + S
Sbjct: 265 HKGPIFALKWNKKG-NFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF- 322
Query: 74 LAGASTGV-IKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
A ST + I + L + + ++T GH + A+++ P G AS D LKIW +++
Sbjct: 323 -ASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQD 381
Query: 133 GCIHTYKGHTRGINTIRFTPDGR---------WVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
C+H + H + I TI+++P G + S FD+ V++WD+ G +H H
Sbjct: 382 NCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKH 441
Query: 184 EGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDG 238
+ + S+ F P LA+GS D+ V W+ +T L+ S R G+ + ++ G
Sbjct: 442 QEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAG 495
Score = 215 (80.7 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 50/221 (22%), Positives = 104/221 (47%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A G Q+F HSA + + ++ + D +++ +G+ + + G ++ V
Sbjct: 295 AHTGEAKQQFPFHSAPA--LDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEV 352
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGE-------- 113
+++ +D L+ + + +K+W +++ V L H +++ P G
Sbjct: 353 NAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNAN 412
Query: 114 -FFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLT 172
AS D+ +++WD+ + CIHT H + ++ F+PDGR++ SG FD V +W+
Sbjct: 413 LMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQ 472
Query: 173 AGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDL 213
G L+H ++ G I + ++ + ++D +V DL
Sbjct: 473 TGALVHSYR-GTGGIFEVCWNAAGDKVGASASDGSVCVLDL 512
Score = 213 (80.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 70/274 (25%), Positives = 119/274 (43%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGL-SSPVDSVAFDSAEVLVL-AGASTGVIKLWDLE 88
L TG D +W K L S G P+ ++ ++ +L AG I +WD
Sbjct: 240 LATGSYDGFARIWT--KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTI-IWDAH 296
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ + H + V++ FAS D + + + + I T++GHT +N I
Sbjct: 297 TGEAKQQFPFHSAPALDVDWQS-NNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAI 355
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL---------EFLL 199
++ P G + S D +K+W + +HD + H I +I + P +L
Sbjct: 356 KWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLML 415
Query: 200 ATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEP-V 257
A+ S D TV+ WD++ I + V+++ F PDGR L SG FD + +++ +
Sbjct: 416 ASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGA 475
Query: 258 ICHDSVDMGWSTLGDLCIND-GKLLGCSFYRNSV 290
+ H G + ++C N G +G S SV
Sbjct: 476 LVHSY--RGTGGIFEVCWNAAGDKVGASASDGSV 507
Score = 155 (59.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 57/231 (24%), Positives = 98/231 (42%)
Query: 48 PTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKM---VRTLTGH----- 99
P + L G S V A++ L+ +G+ ++W+L E+ + + H
Sbjct: 159 PNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREG 218
Query: 100 ----KSN--CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRG-INTIRFTP 152
SN T+++++ G A+G D +IW K G + + G +G I +++
Sbjct: 219 GQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT--KDGNLASTLGQHKGPIFALKWNK 276
Query: 153 DGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
G +++S G D +WD G+ F FH +D+ A+ S D +
Sbjct: 277 KGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNN-TFASCSTDMCIHVCK 335
Query: 213 LETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD-NLKVYSWEPVIC-HD 261
L I + + V+AI + P G L S DD LK++S + C HD
Sbjct: 336 LGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHD 386
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 247 (92.0 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 63/235 (26%), Positives = 109/235 (46%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H + + KK F+++ G D+ +W A S+P V + S
Sbjct: 265 HKGPIFALKWNKKG-NFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF- 322
Query: 74 LAGASTGV-IKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
A ST + I + L + + ++T GH + A+++ P G AS D LKIW +++
Sbjct: 323 -ASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQD 381
Query: 133 GCIHTYKGHTRGINTIRFTPDGR---------WVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
C+H + H + I TI+++P G + S FD+ V++WD+ G +H H
Sbjct: 382 NCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKH 441
Query: 184 EGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDG 238
+ + S+ F P LA+GS D+ V W+ +T L+ S R G+ + ++ G
Sbjct: 442 QEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAG 495
Score = 215 (80.7 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 50/221 (22%), Positives = 104/221 (47%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A G Q+F HSA + + ++ + D +++ +G+ + + G ++ V
Sbjct: 295 AHTGEAKQQFPFHSAPA--LDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEV 352
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGE-------- 113
+++ +D L+ + + +K+W +++ V L H +++ P G
Sbjct: 353 NAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNAN 412
Query: 114 -FFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLT 172
AS D+ +++WD+ + CIHT H + ++ F+PDGR++ SG FD V +W+
Sbjct: 413 LMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQ 472
Query: 173 AGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDL 213
G L+H ++ G I + ++ + ++D +V DL
Sbjct: 473 TGALVHSYR-GTGGIFEVCWNAAGDKVGASASDGSVCVLDL 512
Score = 213 (80.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 70/274 (25%), Positives = 119/274 (43%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGL-SSPVDSVAFDSAEVLVL-AGASTGVIKLWDLE 88
L TG D +W K L S G P+ ++ ++ +L AG I +WD
Sbjct: 240 LATGSYDGFARIWT--KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTI-IWDAH 296
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ + H + V++ FAS D + + + + I T++GHT +N I
Sbjct: 297 TGEAKQQFPFHSAPALDVDWQS-NNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAI 355
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL---------EFLL 199
++ P G + S D +K+W + +HD + H I +I + P +L
Sbjct: 356 KWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLML 415
Query: 200 ATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEP-V 257
A+ S D TV+ WD++ I + V+++ F PDGR L SG FD + +++ +
Sbjct: 416 ASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGA 475
Query: 258 ICHDSVDMGWSTLGDLCIND-GKLLGCSFYRNSV 290
+ H G + ++C N G +G S SV
Sbjct: 476 LVHSY--RGTGGIFEVCWNAAGDKVGASASDGSV 507
Score = 151 (58.2 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 56/225 (24%), Positives = 96/225 (42%)
Query: 54 LCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKM---VRTLTGH---------KS 101
L G S V A++ L+ +G+ ++W+L E+ + + H S
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPS 224
Query: 102 N--CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRG-INTIRFTPDGRWVV 158
N T+++++ G A+G D +IW K G + + G +G I +++ G +++
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWT--KDGNLASTLGQHKGPIFALKWNKKGNFIL 282
Query: 159 SGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFEL 218
S G D +WD G+ F FH +D+ A+ S D + L
Sbjct: 283 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNN-TFASCSTDMCIHVCKLGQDRP 341
Query: 219 IGSTRPEVTGVHAITFHPDGRTLFSGFDD-NLKVYSWEPVIC-HD 261
I + + V+AI + P G L S DD LK++S + C HD
Sbjct: 342 IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHD 386
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 248 (92.4 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 61/217 (28%), Positives = 100/217 (46%)
Query: 10 EFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSA 69
+F H ++ + + R + +G D+ V LW I TAL ++ + V +VA
Sbjct: 383 QFAGHEQDIYSLDFARDG-RTIASGSGDRTVRLWDIENGTAL-TVFTIEDGVTTVAISPD 440
Query: 70 EVLVLAGASTGVIKLWDLEESKMVRTLTG---HKSNCTAVEFHPFGEFFASGCMDTNLKI 126
V AG+ +++WDL + V L G HK + +V F P G +G +D +K+
Sbjct: 441 TKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKL 500
Query: 127 WDIR----------KKG--CIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAG 174
W++ KG C+ T++GH + ++ TPD +WV+SG D V+ WD G
Sbjct: 501 WELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTG 560
Query: 175 KLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFW 211
+ H+ + S+ P ATGS D + W
Sbjct: 561 STQLMLQGHKNSVISVAPSPTGGFFATGSGDMRARIW 597
Score = 240 (89.5 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 62/247 (25%), Positives = 118/247 (47%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
++L TG +D+++ +W I T + G + S+ F + +G+ ++LWD+E
Sbjct: 359 KYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIE 418
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGC----IHTYKGHTRG 144
+ T + T V P ++ A+G +D ++++WD+ + GC + GH
Sbjct: 419 NGTALTVFT-IEDGVTTVAISPDTKYVAAGSLDKSVRVWDLTQ-GCPVERLEGPDGHKDS 476
Query: 145 INTIRFTPDGRWVVSGGFDNVVKVWDLTA------------GKLLHDFKFHEGHIRSIDF 192
+ ++ F+P+GR +V+G D +K+W+L G+ + F+ H + S+
Sbjct: 477 VYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVAL 536
Query: 193 HPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTG----VHAITFHPDGRTLFSGFDD- 247
P + +GS DR V+FWD T GST+ + G V ++ P G +G D
Sbjct: 537 TPDNQWVMSGSKDRGVQFWDPRT----GSTQLMLQGHKNSVISVAPSPTGGFFATGSGDM 592
Query: 248 NLKVYSW 254
+++S+
Sbjct: 593 RARIWSY 599
Score = 222 (83.2 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 64/211 (30%), Positives = 100/211 (47%)
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
+ SV F + GA I++WD+ + GH+ + +++F G ASG
Sbjct: 349 IRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSG 408
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
D +++WDI + G T G+ T+ +PD ++V +G D V+VWDLT G +
Sbjct: 409 DRTVRLWDI-ENGTALTVFTIEDGVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERL 467
Query: 181 KFHEGH---IRSIDFHPLEFLLATGSADRTVKFWDLET----FELIGST--RPEVT--G- 228
+ +GH + S+ F P L TGS D+T+K W+L T + GS R T G
Sbjct: 468 EGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGH 527
Query: 229 ---VHAITFHPDGRTLFSGFDDNLKVYSWEP 256
V ++ PD + + SG D V W+P
Sbjct: 528 RDFVLSVALTPDNQWVMSGSKDR-GVQFWDP 557
Score = 207 (77.9 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 53/168 (31%), Positives = 90/168 (53%)
Query: 92 MVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR--KKGCI-HTYKGHTRG---I 145
+V TL H+S V F G++ A+GC + + +I+D+ +K C+ T G I
Sbjct: 292 LVHTLQ-HESVVCCVRFSADGKYVATGC-NRSAQIFDVNTGEKVCVLQDDNADTTGDLYI 349
Query: 146 NTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSAD 205
++ F+PDG+++ +G D ++VWD+T + F HE I S+DF +A+GS D
Sbjct: 350 RSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGD 409
Query: 206 RTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVY 252
RTV+ WD+E + E GV + PD + + +G D +++V+
Sbjct: 410 RTVRLWDIENGTALTVFTIE-DGVTTVAISPDTKYVAAGSLDKSVRVW 456
Score = 128 (50.1 bits), Expect = 0.00023, P = 0.00023
Identities = 46/185 (24%), Positives = 76/185 (41%)
Query: 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAI--GKPTA-LMSLCGLSS 59
+ G L F V ++I +++ G D+ V +W + G P L G
Sbjct: 418 ENGTALTVFTIEDG-VTTVAISPDT-KYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKD 475
Query: 60 PVDSVAFDSAEVLVLAGASTGVIKLWDL---------EESK---MVRTLTGHKSNCTAVE 107
V SVAF ++ G+ IKLW+L + SK V+T GH+ +V
Sbjct: 476 SVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVA 535
Query: 108 FHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVK 167
P ++ SG D ++ WD R +GH + ++ +P G + +G D +
Sbjct: 536 LTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGSGDMRAR 595
Query: 168 VWDLT 172
+W T
Sbjct: 596 IWSYT 600
Score = 39 (18.8 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 776 TP-SQTIVNGAENKATK--TP----TQMRLKSSENQVTSTPP 810
TP +Q +++G++++ + P TQ+ L+ +N V S P
Sbjct: 537 TPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAP 578
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 225 (84.3 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 63/246 (25%), Positives = 108/246 (43%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H A + + G + R L++ D K+ +W + ++ SS V + A+ + V
Sbjct: 10 HLAKIYAMHWGTDS-RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFV 68
Query: 74 LAGASTGVIKLWDLEES----KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI 129
G + ++ L+ ++ R L GH + F + S DT +WDI
Sbjct: 69 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCALWDI 127
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
+ GH+ + ++ PDGR VSG D +K+WD+ F HE I +
Sbjct: 128 ETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINA 187
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFE--LIGSTRPEVTGVHAITFHPDGRTLFSGFDD 247
+ F P + TGS D T + +DL + L+ S + G+ ++ F GR L +G+DD
Sbjct: 188 VAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDD 247
Query: 248 -NLKVY 252
N ++
Sbjct: 248 FNCNIW 253
Score = 207 (77.9 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 60/233 (25%), Positives = 101/233 (43%)
Query: 30 FLITGGDDQKVNLWAI----GKPTALMSLCGLSSPVDSVAF-DSAEVLVLAGASTGVIKL 84
F+ GG D +++++ G L G + + F D +++ +G +T L
Sbjct: 67 FVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTT--CAL 124
Query: 85 WDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRG 144
WD+E + GH + ++ P G F SG D ++K+WD+R C T+ GH
Sbjct: 125 WDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESD 184
Query: 145 INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEG---HIRSIDFHPLEFLLAT 201
IN + F P+G +G D +++DL A + L + H+ I S+ F LL
Sbjct: 185 INAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYS-HDNIICGITSVAFSRSGRLLLA 243
Query: 202 GSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYS 253
G D WD + G V + DG + +G +D LK+++
Sbjct: 244 GYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 296
Score = 187 (70.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 57/257 (22%), Positives = 110/257 (42%)
Query: 72 LVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR- 130
L+++ + G + +WD + V + S + P G F A G +D I+ ++
Sbjct: 25 LLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKT 84
Query: 131 KKGCIHTYK---GHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHI 187
++G + + GHT ++ RF D + + S G D +WD+ G+ F H G +
Sbjct: 85 REGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETGQQTVGFAGHSGDV 143
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD 247
S+ P +G+ D ++K WD+ + + ++A+ F P+G +G DD
Sbjct: 144 MSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDD 203
Query: 248 -NLKVYSWEP-----VICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADVSHVE 301
+++ + HD++ G +++ G+LL + + IW D +
Sbjct: 204 ATCRLFDLRADQELLMYSHDNIICGITSVA--FSRSGRLLLAGYDDFNCNIW--DAMKGD 259
Query: 302 PYGVGAPEPDQSICTEV 318
GV A ++ C V
Sbjct: 260 RAGVLAGHDNRVSCLGV 276
Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 45/174 (25%), Positives = 74/174 (42%)
Query: 94 RTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPD 153
RTL GH + A+ + S D L IWD +H + + T + P
Sbjct: 5 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 64
Query: 154 GRWVVSGGFDNVVKVWDLTA--G--KLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
G +V GG DN+ ++ L G ++ + H G++ F + + T S D T
Sbjct: 65 GNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD-DNQIITSSGDTTCA 123
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSWEPVICHDS 262
WD+ET + V +++ PDGRT SG D ++K++ +C +
Sbjct: 124 LWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQT 177
Score = 169 (64.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 42/168 (25%), Positives = 71/168 (42%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G + F HS +V +S+ R ++G D + LW + + G S +++V
Sbjct: 130 GQQTVGFAGHSGDVMSLSLAPDG-RTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAV 188
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNC--TAVEFHPFGEFFASGCMDT 122
AF G+ +L+DL + + + C T+V F G +G D
Sbjct: 189 AFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDF 248
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
N IWD K GH ++ + T DG V +G +D+ +K+W+
Sbjct: 249 NCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 296
>FB|FBgn0011569 [details] [associations]
symbol:can "cannonball" species:7227 "Drosophila
melanogaster" [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0007141 "male meiosis I" evidence=IMP] [GO:0048515 "spermatid
differentiation" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0005669 "transcription factor TFIID
complex" evidence=ISS] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=ISS]
[GO:0007126 "meiosis" evidence=TAS] [GO:0007286 "spermatid
development" evidence=IMP;TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0001673
"male germ cell nucleus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0005730 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007286 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001673 GO:GO:0006367 GO:GO:0010468
GO:GO:0007141 HSSP:P16649 GO:GO:0005669
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:AF346730
RefSeq:NP_524827.1 UniGene:Dm.1796 SMR:Q9VT91 IntAct:Q9VT91
MINT:MINT-834439 STRING:Q9VT91 EnsemblMetazoa:FBtr0076299
GeneID:45432 KEGG:dme:Dmel_CG6577 UCSC:CG6577-RA CTD:12329
FlyBase:FBgn0011569 InParanoid:Q9VT91 OMA:RIWDIVK OrthoDB:EOG4F4QS8
GenomeRNAi:45432 NextBio:838153 Uniprot:Q9VT91
Length = 942
Score = 251 (93.4 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 56/187 (29%), Positives = 91/187 (48%)
Query: 29 RFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLE 88
RFLIT +D V LW + + ++ G +PV V F + ++W +
Sbjct: 639 RFLITCSEDFSVRLWCLLSWSCVVIFSGHLAPVCFVVFAPRGYYFATASDDCTARVWMQD 698
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+K R L GH + FHP + A+G D ++IWDI K + ++GH I +
Sbjct: 699 NTKPARILQGHLAELGVCLFHPNRHYMATGSADCTVRIWDIVKAVQVRIFRGHKSRITAL 758
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF-KFHEGHIRSIDFHPLEFLLATGSADRT 207
++ GR++VSGG DN++ +WD TA ++L F H+ I +++ +L G D
Sbjct: 759 IYSICGRYLVSGGDDNLIMIWD-TANEILMQFFDHHKASINTMEISLDNNILVVGGQDCQ 817
Query: 208 VKFWDLE 214
+ WD E
Sbjct: 818 LTLWDFE 824
Score = 192 (72.6 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 46/162 (28%), Positives = 73/162 (45%)
Query: 94 RTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPD 153
RTL GH+ F+P F + D ++++W + C+ + GH + + F P
Sbjct: 620 RTLYGHQGPVYGCSFNPEDRFLITCSEDFSVRLWCLLSWSCVVIFSGHLAPVCFVVFAPR 679
Query: 154 GRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDL 213
G + + D +VW K + H + FHP +ATGSAD TV+ WD+
Sbjct: 680 GYYFATASDDCTARVWMQDNTKPARILQGHLAELGVCLFHPNRHYMATGSADCTVRIWDI 739
Query: 214 ETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWE 255
+ R + + A+ + GR L SG DDNL + W+
Sbjct: 740 VKAVQVRIFRGHKSRITALIYSICGRYLVSGGDDNL-IMIWD 780
Score = 167 (63.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 48/209 (22%), Positives = 87/209 (41%)
Query: 53 SLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFG 112
+L G PV +F+ + ++ + ++LW L V +GH + V F P G
Sbjct: 621 TLYGHQGPVYGCSFNPEDRFLITCSEDFSVRLWCLLSWSCVVIFSGHLAPVCFVVFAPRG 680
Query: 113 EFFASGCMDTNLKIW--DIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
+FA+ D ++W D K I +GH + F P+ ++ +G D V++WD
Sbjct: 681 YYFATASDDCTARVWMQDNTKPARI--LQGHLAELGVCLFHPNRHYMATGSADCTVRIWD 738
Query: 171 LTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVH 230
+ + F+ H+ I ++ + L +G D + WD L+ ++
Sbjct: 739 IVKAVQVRIFRGHKSRITALIYSICGRYLVSGGDDNLIMIWDTANEILMQFFDHHKASIN 798
Query: 231 AITFHPDGRTLFSGFDD-NLKVYSWEPVI 258
+ D L G D L ++ +E VI
Sbjct: 799 TMEISLDNNILVVGGQDCQLTLWDFEQVI 827
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 249 (92.7 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 63/200 (31%), Positives = 99/200 (49%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
+L Q + ++ + K + + + L SPV + DS L G S GVI +WD+E
Sbjct: 74 YLAMISQSQLLRIFDLNKGSVIKNF-KLPSPVYISSVDSTSSLFAFGGSDGVITVWDIEN 132
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEF------FASGCMDTNLKIWDIRKKGCIHTYKGHTR 143
+ +L GH + ++ FH GE ASG +KIWD+ K+ CIHT K H
Sbjct: 133 GYVTHSLKGHGTTICSLTFH--GELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNT 190
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL---EFLLA 200
+ + F DG +SGG DNVV +++ K ++ F +E I + F L
Sbjct: 191 AVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINE-QIEAAGFVSLIDDRQYFY 249
Query: 201 TGSADRTVKFWDLETFELIG 220
TG ++ +K WD+++ E+IG
Sbjct: 250 TGGSENVLKIWDIKSGEMIG 269
Score = 218 (81.8 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 53/216 (24%), Positives = 94/216 (43%)
Query: 11 FVAHSANVNCISIGKKAC--RFLITGGDDQKVNLWAI-GKPTALMSLCGLSSPVDSVAFD 67
F H+ + IS+ K +FL+TG D + W I P +++ + +
Sbjct: 423 FQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDIN 482
Query: 68 SAEVL----VLAGASTGVI-KLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
S +V A AS + K+W + + + L GHK + F+ F + +G D
Sbjct: 483 SIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDK 542
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRF-TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+K+W + C T +GHT + ++F + ++S G D ++K+WD G+++
Sbjct: 543 TIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIKSLD 602
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFE 217
H+ I ++D T AD + FW T E
Sbjct: 603 NHDQRIWAMDLKNDGEYFTTADADGKLSFWTDNTEE 638
Score = 185 (70.2 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 76/341 (22%), Positives = 136/341 (39%)
Query: 45 IGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLW----DLEESKMVRTLTGHK 100
I KP L G + +++V + + + +LW +L++ + GH
Sbjct: 368 IEKPLELRVYEGHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHA 427
Query: 101 SNCTAVEFHPFG---EFFASGCMDTNLKIWDIRK------KGCIHTYKGHTRGINTIRFT 151
TA+ +F +G D +K W I K +T + H + IN+I +
Sbjct: 428 GAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVS 487
Query: 152 PDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFW 211
P+ + + +D + KVW +G+ + K H+ + I+F+ + L+ TGS D+T+K W
Sbjct: 488 PNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVW 547
Query: 212 DLETFELIGSTRPEVTGVHAITF----HPDGRTLFSGFDDNLKVYSW---EPVICHDSVD 264
L F + V + F HP + L G D +K++ + E + D+ D
Sbjct: 548 SLLDFSCKKTLEGHTNSVQRVKFFNREHP--QLLSCGADGLIKLWDYKQGEIIKSLDNHD 605
Query: 265 MG-WSTLGDLCINDGKLLGCSFYRNSVGIWV----ADVSHVEPYGVGAPEPDQSICTEVK 319
W+ DL NDG+ + + W +V E E +QS+ +K
Sbjct: 606 QRIWAM--DLK-NDGEYFTTADADGKLSFWTDNTEEEVKFKELQAKEKIEQEQSLSNYIK 662
Query: 320 FNPPGSHSLEKVGIIGRSTSGFRSTSPDYETKDIKTIYVDS 360
N S++ + S + ET + K + S
Sbjct: 663 -NKDWSNAFLLALTLDHSMRLYNVIKSSIETNEDKDSIIGS 702
Score = 176 (67.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 53/194 (27%), Positives = 89/194 (45%)
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
S++ + E+L+ + VI + +L+ ++++ + G T + P G + A
Sbjct: 24 SISTSNGELLLATPLNEDVI-ITNLDTNEIIYKIPGDGEVITNLTITPDGSYLAMISQSQ 82
Query: 123 NLKIWDIRKKGCIHTYKGHTRG-INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
L+I+D+ K I +K + I+++ T GG D V+ VWD+ G + H K
Sbjct: 83 LLRIFDLNKGSVIKNFKLPSPVYISSVDSTSS--LFAFGGSDGVITVWDIENGYVTHSLK 140
Query: 182 FHEGHIRSIDFH----PLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPD 237
H I S+ FH ++ LA+G TVK WDL I + + T V + F D
Sbjct: 141 GHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQD 200
Query: 238 GRTLFSGFDDNLKV 251
G SG DN+ +
Sbjct: 201 GDLFISGGRDNVVI 214
Score = 164 (62.8 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 50/226 (22%), Positives = 101/226 (44%)
Query: 54 LCGLSSPVDSVAFDSAEVLVLAGASTG-VIKLWDLEESKMVRTLTGHKSNCTAVEFHPFG 112
+ G + + + E +LA A+ +++ D+E+ +R GH AV+ G
Sbjct: 334 IAGNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDG 393
Query: 113 EFFASGCMDTNLKIW----DIRKKGCIHTYKGHTRGINTIRFTP---DGRWVVSGGFDNV 165
++ A+ D ++W +++ ++GH I I + + +++V+G D
Sbjct: 394 KWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLT 453
Query: 166 VKVWDL--TAGKLLHDFKF----HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELI 219
+K W + T ++ ++ H+ I SID P + AT S D+ K W ++ E I
Sbjct: 454 IKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETI 513
Query: 220 GSTRPEVTGVHAITFHPDGRTLFSGFDDN-LKVYSWEPVICHDSVD 264
G + G+ I F+ + + +G D +KV+S C +++
Sbjct: 514 GVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLE 559
Score = 141 (54.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 40/179 (22%), Positives = 77/179 (43%)
Query: 81 VIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKG 140
+++++DL + +++ S FA G D + +WDI H+ KG
Sbjct: 83 LLRIFDLNKGSVIKNFK-LPSPVYISSVDSTSSLFAFGGSDGVITVWDIENGYVTHSLKG 141
Query: 141 HTRGINTIRFTPDGR---W-VVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLE 196
H I ++ F + W + SG VK+WDL + +H K H +R + F
Sbjct: 142 HGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDG 201
Query: 197 FLLATGSADRTVKFWDLETFELIGS--TRPEVTGVHAITFHPDGRTLFSGFDDN-LKVY 252
L +G D V ++ + F+ I + ++ ++ D + ++G +N LK++
Sbjct: 202 DLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFVSLIDDRQYFYTGGSENVLKIW 260
Score = 133 (51.9 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 41/140 (29%), Positives = 68/140 (48%)
Query: 86 DLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN---LKIWDIRKKGCIHTYKGHT 142
++ E +V+ + G++ +++ G F M TN L+I DI K + Y+GHT
Sbjct: 324 EIVEFPIVKRIAGNQGIIADIKY--VGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHT 381
Query: 143 RGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF----KF--HEGHIRSIDFHPLE 196
+N + + DG+W+ + DN ++W G+L DF +F H G I +I +
Sbjct: 382 DILNAVDVSTDGKWIATASKDNEARLWRWN-GEL-QDFEPFARFQGHAGAITAISLSKSQ 439
Query: 197 F---LLATGSADRTVKFWDL 213
L TGS D T+K W +
Sbjct: 440 NEPKFLVTGSTDLTIKKWKI 459
Score = 131 (51.2 bits), Expect = 0.00016, P = 0.00016
Identities = 38/169 (22%), Positives = 70/169 (41%)
Query: 7 KLQEFV--AHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
K E+ AH ++N I + + T D+ +W + L G + +
Sbjct: 468 KTSEYTRRAHDKDINSIDVSPND-EYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDI 526
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEF----HPFGEFFASGCM 120
F + L++ G+ IK+W L + +TL GH ++ V+F HP + + G
Sbjct: 527 NFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHP--QLLSCGA- 583
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVW 169
D +K+WD ++ I + H + I + DG + + D + W
Sbjct: 584 DGLIKLWDYKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLSFW 632
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 249 (92.7 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 63/200 (31%), Positives = 99/200 (49%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
+L Q + ++ + K + + + L SPV + DS L G S GVI +WD+E
Sbjct: 74 YLAMISQSQLLRIFDLNKGSVIKNF-KLPSPVYISSVDSTSSLFAFGGSDGVITVWDIEN 132
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEF------FASGCMDTNLKIWDIRKKGCIHTYKGHTR 143
+ +L GH + ++ FH GE ASG +KIWD+ K+ CIHT K H
Sbjct: 133 GYVTHSLKGHGTTICSLTFH--GELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNT 190
Query: 144 GINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL---EFLLA 200
+ + F DG +SGG DNVV +++ K ++ F +E I + F L
Sbjct: 191 AVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINE-QIEAAGFVSLIDDRQYFY 249
Query: 201 TGSADRTVKFWDLETFELIG 220
TG ++ +K WD+++ E+IG
Sbjct: 250 TGGSENVLKIWDIKSGEMIG 269
Score = 218 (81.8 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 53/216 (24%), Positives = 94/216 (43%)
Query: 11 FVAHSANVNCISIGKKAC--RFLITGGDDQKVNLWAI-GKPTALMSLCGLSSPVDSVAFD 67
F H+ + IS+ K +FL+TG D + W I P +++ + +
Sbjct: 423 FQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDIN 482
Query: 68 SAEVL----VLAGASTGVI-KLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
S +V A AS + K+W + + + L GHK + F+ F + +G D
Sbjct: 483 SIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDK 542
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRF-TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+K+W + C T +GHT + ++F + ++S G D ++K+WD G+++
Sbjct: 543 TIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIKSLD 602
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFE 217
H+ I ++D T AD + FW T E
Sbjct: 603 NHDQRIWAMDLKNDGEYFTTADADGKLSFWTDNTEE 638
Score = 185 (70.2 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 76/341 (22%), Positives = 136/341 (39%)
Query: 45 IGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLW----DLEESKMVRTLTGHK 100
I KP L G + +++V + + + +LW +L++ + GH
Sbjct: 368 IEKPLELRVYEGHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHA 427
Query: 101 SNCTAVEFHPFG---EFFASGCMDTNLKIWDIRK------KGCIHTYKGHTRGINTIRFT 151
TA+ +F +G D +K W I K +T + H + IN+I +
Sbjct: 428 GAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVS 487
Query: 152 PDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFW 211
P+ + + +D + KVW +G+ + K H+ + I+F+ + L+ TGS D+T+K W
Sbjct: 488 PNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVW 547
Query: 212 DLETFELIGSTRPEVTGVHAITF----HPDGRTLFSGFDDNLKVYSW---EPVICHDSVD 264
L F + V + F HP + L G D +K++ + E + D+ D
Sbjct: 548 SLLDFSCKKTLEGHTNSVQRVKFFNREHP--QLLSCGADGLIKLWDYKQGEIIKSLDNHD 605
Query: 265 MG-WSTLGDLCINDGKLLGCSFYRNSVGIWV----ADVSHVEPYGVGAPEPDQSICTEVK 319
W+ DL NDG+ + + W +V E E +QS+ +K
Sbjct: 606 QRIWAM--DLK-NDGEYFTTADADGKLSFWTDNTEEEVKFKELQAKEKIEQEQSLSNYIK 662
Query: 320 FNPPGSHSLEKVGIIGRSTSGFRSTSPDYETKDIKTIYVDS 360
N S++ + S + ET + K + S
Sbjct: 663 -NKDWSNAFLLALTLDHSMRLYNVIKSSIETNEDKDSIIGS 702
Score = 176 (67.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 53/194 (27%), Positives = 89/194 (45%)
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
S++ + E+L+ + VI + +L+ ++++ + G T + P G + A
Sbjct: 24 SISTSNGELLLATPLNEDVI-ITNLDTNEIIYKIPGDGEVITNLTITPDGSYLAMISQSQ 82
Query: 123 NLKIWDIRKKGCIHTYKGHTRG-INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
L+I+D+ K I +K + I+++ T GG D V+ VWD+ G + H K
Sbjct: 83 LLRIFDLNKGSVIKNFKLPSPVYISSVDSTSS--LFAFGGSDGVITVWDIENGYVTHSLK 140
Query: 182 FHEGHIRSIDFH----PLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPD 237
H I S+ FH ++ LA+G TVK WDL I + + T V + F D
Sbjct: 141 GHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQD 200
Query: 238 GRTLFSGFDDNLKV 251
G SG DN+ +
Sbjct: 201 GDLFISGGRDNVVI 214
Score = 164 (62.8 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 50/226 (22%), Positives = 101/226 (44%)
Query: 54 LCGLSSPVDSVAFDSAEVLVLAGASTG-VIKLWDLEESKMVRTLTGHKSNCTAVEFHPFG 112
+ G + + + E +LA A+ +++ D+E+ +R GH AV+ G
Sbjct: 334 IAGNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDG 393
Query: 113 EFFASGCMDTNLKIW----DIRKKGCIHTYKGHTRGINTIRFTP---DGRWVVSGGFDNV 165
++ A+ D ++W +++ ++GH I I + + +++V+G D
Sbjct: 394 KWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLT 453
Query: 166 VKVWDL--TAGKLLHDFKF----HEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELI 219
+K W + T ++ ++ H+ I SID P + AT S D+ K W ++ E I
Sbjct: 454 IKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETI 513
Query: 220 GSTRPEVTGVHAITFHPDGRTLFSGFDDN-LKVYSWEPVICHDSVD 264
G + G+ I F+ + + +G D +KV+S C +++
Sbjct: 514 GVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLE 559
Score = 141 (54.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 40/179 (22%), Positives = 77/179 (43%)
Query: 81 VIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKG 140
+++++DL + +++ S FA G D + +WDI H+ KG
Sbjct: 83 LLRIFDLNKGSVIKNFK-LPSPVYISSVDSTSSLFAFGGSDGVITVWDIENGYVTHSLKG 141
Query: 141 HTRGINTIRFTPDGR---W-VVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLE 196
H I ++ F + W + SG VK+WDL + +H K H +R + F
Sbjct: 142 HGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDG 201
Query: 197 FLLATGSADRTVKFWDLETFELIGS--TRPEVTGVHAITFHPDGRTLFSGFDDN-LKVY 252
L +G D V ++ + F+ I + ++ ++ D + ++G +N LK++
Sbjct: 202 DLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFVSLIDDRQYFYTGGSENVLKIW 260
Score = 133 (51.9 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 41/140 (29%), Positives = 68/140 (48%)
Query: 86 DLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN---LKIWDIRKKGCIHTYKGHT 142
++ E +V+ + G++ +++ G F M TN L+I DI K + Y+GHT
Sbjct: 324 EIVEFPIVKRIAGNQGIIADIKY--VGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHT 381
Query: 143 RGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF----KF--HEGHIRSIDFHPLE 196
+N + + DG+W+ + DN ++W G+L DF +F H G I +I +
Sbjct: 382 DILNAVDVSTDGKWIATASKDNEARLWRWN-GEL-QDFEPFARFQGHAGAITAISLSKSQ 439
Query: 197 F---LLATGSADRTVKFWDL 213
L TGS D T+K W +
Sbjct: 440 NEPKFLVTGSTDLTIKKWKI 459
Score = 131 (51.2 bits), Expect = 0.00016, P = 0.00016
Identities = 38/169 (22%), Positives = 70/169 (41%)
Query: 7 KLQEFV--AHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
K E+ AH ++N I + + T D+ +W + L G + +
Sbjct: 468 KTSEYTRRAHDKDINSIDVSPND-EYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDI 526
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEF----HPFGEFFASGCM 120
F + L++ G+ IK+W L + +TL GH ++ V+F HP + + G
Sbjct: 527 NFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHP--QLLSCGA- 583
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVW 169
D +K+WD ++ I + H + I + DG + + D + W
Sbjct: 584 DGLIKLWDYKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLSFW 632
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 245 (91.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 63/235 (26%), Positives = 109/235 (46%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H + + KK F+++ G D+ +W A S+P V + S
Sbjct: 265 HKGPIFALKWNKKG-NFILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQSNNTF- 322
Query: 74 LAGASTGV-IKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
A ST + I + L + + ++T GH + A+++ P G AS D LKIW +++
Sbjct: 323 -ASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQD 381
Query: 133 GCIHTYKGHTRGINTIRFTPDGR---------WVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
C+H + H + I TI+++P G + S FD+ V++WD+ G +H H
Sbjct: 382 NCVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKH 441
Query: 184 EGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDG 238
+ + S+ F P LA+GS D+ V W+ +T L+ S R G+ + ++ G
Sbjct: 442 QEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAG 495
Score = 213 (80.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 70/274 (25%), Positives = 119/274 (43%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGL-SSPVDSVAFDSAEVLVL-AGASTGVIKLWDLE 88
L TG D +W K L S G P+ ++ ++ +L AG I +WD
Sbjct: 240 LATGSYDGFARIWT--KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTI-IWDAH 296
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ + H + V++ FAS D + + + + I T++GHT +N I
Sbjct: 297 TGEAKQLFPFHSAPALDVDWQS-NNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAI 355
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL---------EFLL 199
++ P G + S D +K+W + +HD + H I +I + P +L
Sbjct: 356 KWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTSNPNANLML 415
Query: 200 ATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYSWEP-V 257
A+ S D TV+ WD++ I + V+++ F PDGR L SG FD + +++ +
Sbjct: 416 ASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGA 475
Query: 258 ICHDSVDMGWSTLGDLCIND-GKLLGCSFYRNSV 290
+ H G + ++C N G +G S SV
Sbjct: 476 LVHSY--RGTGGIFEVCWNAAGDKVGASASDGSV 507
Score = 210 (79.0 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 50/221 (22%), Positives = 103/221 (46%)
Query: 2 AKRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPV 61
A G Q F HSA + + ++ + D +++ +G+ + + G ++ V
Sbjct: 295 AHTGEAKQLFPFHSAPA--LDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEV 352
Query: 62 DSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGE-------- 113
+++ +D L+ + + +K+W +++ V L H +++ P G
Sbjct: 353 NAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTSNPNAN 412
Query: 114 -FFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLT 172
AS D+ +++WD+ + CIHT H + ++ F+PDGR++ SG FD V +W+
Sbjct: 413 LMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQ 472
Query: 173 AGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDL 213
G L+H ++ G I + ++ + ++D +V DL
Sbjct: 473 TGALVHSYR-GTGGIFEVCWNAAGDKVGASASDGSVCVLDL 512
Score = 152 (58.6 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 58/231 (25%), Positives = 98/231 (42%)
Query: 48 PTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE---SKMVRTLTGH----- 99
P + L G S V A++ L+ +G+ ++W+L E S + + H
Sbjct: 159 PNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREG 218
Query: 100 ----KSN--CTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRG-INTIRFTP 152
SN T+++++ G A+G D +IW K G + + G +G I +++
Sbjct: 219 GQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT--KDGNLASTLGQHKGPIFALKWNK 276
Query: 153 DGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
G +++S G D +WD G+ F FH +D+ A+ S D +
Sbjct: 277 KGNFILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQSNN-TFASCSTDMCIHVCK 335
Query: 213 LETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDD-NLKVYSWEPVIC-HD 261
L I + + V+AI + P G L S DD LK++S + C HD
Sbjct: 336 LGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHD 386
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 236 (88.1 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 68/246 (27%), Positives = 110/246 (44%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H A + + G + R L++ D K+ +W + ++ SS V + A+ + V
Sbjct: 54 HLAKIYAMHWGTDS-RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 74 LAGASTGVIKLWDLEES----KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI 129
G + +++L+ ++ R L GH + F + S DT +WDI
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDI 171
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
T+ GHT + ++ PD R VSG D K+WD+ G F HE I +
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETF-ELIGSTRPEVT-GVHAITFHPDGRTLFSGFDD 247
I F P ATGS D T + +DL EL+ + + G+ +++F GR L +G+DD
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD 291
Query: 248 -NLKVY 252
N V+
Sbjct: 292 FNCNVW 297
Score = 215 (80.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 61/233 (26%), Positives = 101/233 (43%)
Query: 30 FLITGGDDQKVNLWAI----GKPTALMSLCGLSSPVDSVAF-DSAEVLVLAGASTGVIKL 84
++ GG D +++ + G L G + + F D +++ +G +T L
Sbjct: 111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT--CAL 168
Query: 85 WDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRG 144
WD+E + T TGH + ++ P F SG D + K+WD+R+ C T+ GH
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228
Query: 145 INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEG---HIRSIDFHPLEFLLAT 201
IN I F P+G +G D +++DL A + L + H+ I S+ F LL
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRLLLA 287
Query: 202 GSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYS 253
G D WD + G V + DG + +G +D LK+++
Sbjct: 288 GYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 197 (74.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 63/261 (24%), Positives = 112/261 (42%)
Query: 72 LVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR- 130
L+++ + G + +WD + V + S + P G + A G +D I++++
Sbjct: 69 LLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT 128
Query: 131 KKGCIHTYK---GHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHI 187
++G + + GHT ++ RF D + V S G D +WD+ G+ F H G +
Sbjct: 129 REGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHTGDV 187
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTG----VHAITFHPDGRTLFS 243
S+ P L +G+ D + K WD+ G R TG ++AI F P+G +
Sbjct: 188 MSLSLAPDTRLFVSGACDASAKLWDVRE----GMCRQTFTGHESDINAICFFPNGNAFAT 243
Query: 244 GFDD------NLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADV 297
G DD +L+ HD++ G +++ G+LL + + +W D
Sbjct: 244 GSDDATCRLFDLRADQELMTYSHDNIICGITSVS--FSKSGRLLLAGYDDFNCNVW--DA 299
Query: 298 SHVEPYGVGAPEPDQSICTEV 318
+ GV A ++ C V
Sbjct: 300 LKADRAGVLAGHDNRVSCLGV 320
Score = 169 (64.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 39/168 (23%), Positives = 71/168 (42%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G + F H+ +V +S+ R ++G D LW + + + G S ++++
Sbjct: 174 GQQTTTFTGHTGDVMSLSLAPDT-RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAI 232
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNC--TAVEFHPFGEFFASGCMDT 122
F G+ +L+DL + + T + C T+V F G +G D
Sbjct: 233 CFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF 292
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
N +WD K GH ++ + T DG V +G +D+ +K+W+
Sbjct: 293 NCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/186 (24%), Positives = 77/186 (41%)
Query: 94 RTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPD 153
RTL GH + A+ + S D L IWD +H + + T + P
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 154 GRWVVSGGFDNVVKVWDLTA--G--KLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
G +V GG DN+ +++L G ++ + H G++ F + + T S D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSSGDTTCA 167
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSWEPVICHDSVDMGWS 268
WD+ET + + V +++ PD R SG D + K++ +C + S
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHES 227
Query: 269 TLGDLC 274
+ +C
Sbjct: 228 DINAIC 233
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 236 (88.1 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 68/246 (27%), Positives = 110/246 (44%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H A + + G + R L++ D K+ +W + ++ SS V + A+ + V
Sbjct: 54 HLAKIYAMHWGTDS-RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 74 LAGASTGVIKLWDLEES----KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI 129
G + +++L+ ++ R L GH + F + S DT +WDI
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDI 171
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
T+ GHT + ++ PD R VSG D K+WD+ G F HE I +
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETF-ELIGSTRPEVT-GVHAITFHPDGRTLFSGFDD 247
I F P ATGS D T + +DL EL+ + + G+ +++F GR L +G+DD
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD 291
Query: 248 -NLKVY 252
N V+
Sbjct: 292 FNCNVW 297
Score = 215 (80.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 61/233 (26%), Positives = 101/233 (43%)
Query: 30 FLITGGDDQKVNLWAI----GKPTALMSLCGLSSPVDSVAF-DSAEVLVLAGASTGVIKL 84
++ GG D +++ + G L G + + F D +++ +G +T L
Sbjct: 111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT--CAL 168
Query: 85 WDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRG 144
WD+E + T TGH + ++ P F SG D + K+WD+R+ C T+ GH
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228
Query: 145 INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEG---HIRSIDFHPLEFLLAT 201
IN I F P+G +G D +++DL A + L + H+ I S+ F LL
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRLLLA 287
Query: 202 GSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYS 253
G D WD + G V + DG + +G +D LK+++
Sbjct: 288 GYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 197 (74.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 63/261 (24%), Positives = 112/261 (42%)
Query: 72 LVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR- 130
L+++ + G + +WD + V + S + P G + A G +D I++++
Sbjct: 69 LLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT 128
Query: 131 KKGCIHTYK---GHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHI 187
++G + + GHT ++ RF D + V S G D +WD+ G+ F H G +
Sbjct: 129 REGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHTGDV 187
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTG----VHAITFHPDGRTLFS 243
S+ P L +G+ D + K WD+ G R TG ++AI F P+G +
Sbjct: 188 MSLSLAPDTRLFVSGACDASAKLWDVRE----GMCRQTFTGHESDINAICFFPNGNAFAT 243
Query: 244 GFDD------NLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADV 297
G DD +L+ HD++ G +++ G+LL + + +W D
Sbjct: 244 GSDDATCRLFDLRADQELMTYSHDNIICGITSVS--FSKSGRLLLAGYDDFNCNVW--DA 299
Query: 298 SHVEPYGVGAPEPDQSICTEV 318
+ GV A ++ C V
Sbjct: 300 LKADRAGVLAGHDNRVSCLGV 320
Score = 169 (64.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 39/168 (23%), Positives = 71/168 (42%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G + F H+ +V +S+ R ++G D LW + + + G S ++++
Sbjct: 174 GQQTTTFTGHTGDVMSLSLAPDT-RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAI 232
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNC--TAVEFHPFGEFFASGCMDT 122
F G+ +L+DL + + T + C T+V F G +G D
Sbjct: 233 CFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF 292
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
N +WD K GH ++ + T DG V +G +D+ +K+W+
Sbjct: 293 NCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/186 (24%), Positives = 77/186 (41%)
Query: 94 RTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPD 153
RTL GH + A+ + S D L IWD +H + + T + P
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 154 GRWVVSGGFDNVVKVWDLTA--G--KLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
G +V GG DN+ +++L G ++ + H G++ F + + T S D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSSGDTTCA 167
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSWEPVICHDSVDMGWS 268
WD+ET + + V +++ PD R SG D + K++ +C + S
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHES 227
Query: 269 TLGDLC 274
+ +C
Sbjct: 228 DINAIC 233
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 236 (88.1 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 68/246 (27%), Positives = 110/246 (44%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H A + + G + R L++ D K+ +W + ++ SS V + A+ + V
Sbjct: 54 HLAKIYAMHWGTDS-RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 74 LAGASTGVIKLWDLEES----KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI 129
G + +++L+ ++ R L GH + F + S DT +WDI
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDI 171
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
T+ GHT + ++ PD R VSG D K+WD+ G F HE I +
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETF-ELIGSTRPEVT-GVHAITFHPDGRTLFSGFDD 247
I F P ATGS D T + +DL EL+ + + G+ +++F GR L +G+DD
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD 291
Query: 248 -NLKVY 252
N V+
Sbjct: 292 FNCNVW 297
Score = 215 (80.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 61/233 (26%), Positives = 101/233 (43%)
Query: 30 FLITGGDDQKVNLWAI----GKPTALMSLCGLSSPVDSVAF-DSAEVLVLAGASTGVIKL 84
++ GG D +++ + G L G + + F D +++ +G +T L
Sbjct: 111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT--CAL 168
Query: 85 WDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRG 144
WD+E + T TGH + ++ P F SG D + K+WD+R+ C T+ GH
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228
Query: 145 INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEG---HIRSIDFHPLEFLLAT 201
IN I F P+G +G D +++DL A + L + H+ I S+ F LL
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRLLLA 287
Query: 202 GSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYS 253
G D WD + G V + DG + +G +D LK+++
Sbjct: 288 GYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 197 (74.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 63/261 (24%), Positives = 112/261 (42%)
Query: 72 LVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR- 130
L+++ + G + +WD + V + S + P G + A G +D I++++
Sbjct: 69 LLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT 128
Query: 131 KKGCIHTYK---GHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHI 187
++G + + GHT ++ RF D + V S G D +WD+ G+ F H G +
Sbjct: 129 REGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHTGDV 187
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTG----VHAITFHPDGRTLFS 243
S+ P L +G+ D + K WD+ G R TG ++AI F P+G +
Sbjct: 188 MSLSLAPDTRLFVSGACDASAKLWDVRE----GMCRQTFTGHESDINAICFFPNGNAFAT 243
Query: 244 GFDD------NLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADV 297
G DD +L+ HD++ G +++ G+LL + + +W D
Sbjct: 244 GSDDATCRLFDLRADQELMTYSHDNIICGITSVS--FSKSGRLLLAGYDDFNCNVW--DA 299
Query: 298 SHVEPYGVGAPEPDQSICTEV 318
+ GV A ++ C V
Sbjct: 300 LKADRAGVLAGHDNRVSCLGV 320
Score = 169 (64.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 39/168 (23%), Positives = 71/168 (42%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G + F H+ +V +S+ R ++G D LW + + + G S ++++
Sbjct: 174 GQQTTTFTGHTGDVMSLSLAPDT-RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAI 232
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNC--TAVEFHPFGEFFASGCMDT 122
F G+ +L+DL + + T + C T+V F G +G D
Sbjct: 233 CFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF 292
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
N +WD K GH ++ + T DG V +G +D+ +K+W+
Sbjct: 293 NCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/186 (24%), Positives = 77/186 (41%)
Query: 94 RTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPD 153
RTL GH + A+ + S D L IWD +H + + T + P
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 154 GRWVVSGGFDNVVKVWDLTA--G--KLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
G +V GG DN+ +++L G ++ + H G++ F + + T S D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSSGDTTCA 167
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSWEPVICHDSVDMGWS 268
WD+ET + + V +++ PD R SG D + K++ +C + S
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHES 227
Query: 269 TLGDLC 274
+ +C
Sbjct: 228 DINAIC 233
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 236 (88.1 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 68/246 (27%), Positives = 110/246 (44%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H A + + G + R L++ D K+ +W + ++ SS V + A+ + V
Sbjct: 54 HLAKIYAMHWGTDS-RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 74 LAGASTGVIKLWDLEES----KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI 129
G + +++L+ ++ R L GH + F + S DT +WDI
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDI 171
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
T+ GHT + ++ PD R VSG D K+WD+ G F HE I +
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETF-ELIGSTRPEVT-GVHAITFHPDGRTLFSGFDD 247
I F P ATGS D T + +DL EL+ + + G+ +++F GR L +G+DD
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD 291
Query: 248 -NLKVY 252
N V+
Sbjct: 292 FNCNVW 297
Score = 215 (80.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 61/233 (26%), Positives = 101/233 (43%)
Query: 30 FLITGGDDQKVNLWAI----GKPTALMSLCGLSSPVDSVAF-DSAEVLVLAGASTGVIKL 84
++ GG D +++ + G L G + + F D +++ +G +T L
Sbjct: 111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT--CAL 168
Query: 85 WDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRG 144
WD+E + T TGH + ++ P F SG D + K+WD+R+ C T+ GH
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228
Query: 145 INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEG---HIRSIDFHPLEFLLAT 201
IN I F P+G +G D +++DL A + L + H+ I S+ F LL
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRLLLA 287
Query: 202 GSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYS 253
G D WD + G V + DG + +G +D LK+++
Sbjct: 288 GYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 197 (74.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 63/261 (24%), Positives = 112/261 (42%)
Query: 72 LVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR- 130
L+++ + G + +WD + V + S + P G + A G +D I++++
Sbjct: 69 LLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT 128
Query: 131 KKGCIHTYK---GHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHI 187
++G + + GHT ++ RF D + V S G D +WD+ G+ F H G +
Sbjct: 129 REGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHTGDV 187
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTG----VHAITFHPDGRTLFS 243
S+ P L +G+ D + K WD+ G R TG ++AI F P+G +
Sbjct: 188 MSLSLAPDTRLFVSGACDASAKLWDVRE----GMCRQTFTGHESDINAICFFPNGNAFAT 243
Query: 244 GFDD------NLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADV 297
G DD +L+ HD++ G +++ G+LL + + +W D
Sbjct: 244 GSDDATCRLFDLRADQELMTYSHDNIICGITSVS--FSKSGRLLLAGYDDFNCNVW--DA 299
Query: 298 SHVEPYGVGAPEPDQSICTEV 318
+ GV A ++ C V
Sbjct: 300 LKADRAGVLAGHDNRVSCLGV 320
Score = 169 (64.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 39/168 (23%), Positives = 71/168 (42%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G + F H+ +V +S+ R ++G D LW + + + G S ++++
Sbjct: 174 GQQTTTFTGHTGDVMSLSLAPDT-RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAI 232
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNC--TAVEFHPFGEFFASGCMDT 122
F G+ +L+DL + + T + C T+V F G +G D
Sbjct: 233 CFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF 292
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
N +WD K GH ++ + T DG V +G +D+ +K+W+
Sbjct: 293 NCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/186 (24%), Positives = 77/186 (41%)
Query: 94 RTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPD 153
RTL GH + A+ + S D L IWD +H + + T + P
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 154 GRWVVSGGFDNVVKVWDLTA--G--KLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
G +V GG DN+ +++L G ++ + H G++ F + + T S D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSSGDTTCA 167
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSWEPVICHDSVDMGWS 268
WD+ET + + V +++ PD R SG D + K++ +C + S
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHES 227
Query: 269 TLGDLC 274
+ +C
Sbjct: 228 DINAIC 233
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 236 (88.1 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 68/246 (27%), Positives = 110/246 (44%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H A + + G + R L++ D K+ +W + ++ SS V + A+ + V
Sbjct: 54 HLAKIYAMHWGTDS-RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 74 LAGASTGVIKLWDLEES----KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI 129
G + +++L+ ++ R L GH + F + S DT +WDI
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDI 171
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
T+ GHT + ++ PD R VSG D K+WD+ G F HE I +
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETF-ELIGSTRPEVT-GVHAITFHPDGRTLFSGFDD 247
I F P ATGS D T + +DL EL+ + + G+ +++F GR L +G+DD
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD 291
Query: 248 -NLKVY 252
N V+
Sbjct: 292 FNCNVW 297
Score = 215 (80.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 61/233 (26%), Positives = 101/233 (43%)
Query: 30 FLITGGDDQKVNLWAI----GKPTALMSLCGLSSPVDSVAF-DSAEVLVLAGASTGVIKL 84
++ GG D +++ + G L G + + F D +++ +G +T L
Sbjct: 111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT--CAL 168
Query: 85 WDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRG 144
WD+E + T TGH + ++ P F SG D + K+WD+R+ C T+ GH
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228
Query: 145 INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEG---HIRSIDFHPLEFLLAT 201
IN I F P+G +G D +++DL A + L + H+ I S+ F LL
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRLLLA 287
Query: 202 GSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYS 253
G D WD + G V + DG + +G +D LK+++
Sbjct: 288 GYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 197 (74.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 63/261 (24%), Positives = 112/261 (42%)
Query: 72 LVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR- 130
L+++ + G + +WD + V + S + P G + A G +D I++++
Sbjct: 69 LLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT 128
Query: 131 KKGCIHTYK---GHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHI 187
++G + + GHT ++ RF D + V S G D +WD+ G+ F H G +
Sbjct: 129 REGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHTGDV 187
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTG----VHAITFHPDGRTLFS 243
S+ P L +G+ D + K WD+ G R TG ++AI F P+G +
Sbjct: 188 MSLSLAPDTRLFVSGACDASAKLWDVRE----GMCRQTFTGHESDINAICFFPNGNAFAT 243
Query: 244 GFDD------NLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADV 297
G DD +L+ HD++ G +++ G+LL + + +W D
Sbjct: 244 GSDDATCRLFDLRADQELMTYSHDNIICGITSVS--FSKSGRLLLAGYDDFNCNVW--DA 299
Query: 298 SHVEPYGVGAPEPDQSICTEV 318
+ GV A ++ C V
Sbjct: 300 LKADRAGVLAGHDNRVSCLGV 320
Score = 169 (64.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 39/168 (23%), Positives = 71/168 (42%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G + F H+ +V +S+ R ++G D LW + + + G S ++++
Sbjct: 174 GQQTTTFTGHTGDVMSLSLAPDT-RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAI 232
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNC--TAVEFHPFGEFFASGCMDT 122
F G+ +L+DL + + T + C T+V F G +G D
Sbjct: 233 CFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF 292
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
N +WD K GH ++ + T DG V +G +D+ +K+W+
Sbjct: 293 NCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/186 (24%), Positives = 77/186 (41%)
Query: 94 RTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPD 153
RTL GH + A+ + S D L IWD +H + + T + P
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 154 GRWVVSGGFDNVVKVWDLTA--G--KLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
G +V GG DN+ +++L G ++ + H G++ F + + T S D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSSGDTTCA 167
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSWEPVICHDSVDMGWS 268
WD+ET + + V +++ PD R SG D + K++ +C + S
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHES 227
Query: 269 TLGDLC 274
+ +C
Sbjct: 228 DINAIC 233
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 258 (95.9 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 70/246 (28%), Positives = 112/246 (45%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
HS V C+ + + L +G D + LW + + L G SS V + FD +++
Sbjct: 272 HSDGVMCLQLVRN---ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCKLI- 327
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
+G+ I++W+ S+ + L GH + + F SG D +K+W G
Sbjct: 328 -SGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFD--STLLVSGSADCTVKLWHF-SGG 383
Query: 134 CIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFH 193
T +GHT +N++R D V+SG D+ +K+W L LH F H G ++S+
Sbjct: 384 KRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLAL- 442
Query: 194 PLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYS 253
+ L + S D T+K WD+E + + + + GV I D L SG D + V
Sbjct: 443 -ADSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIA--ADHLRLISGAHDGV-VKV 498
Query: 254 WEPVIC 259
WE C
Sbjct: 499 WEACEC 504
Score = 177 (67.4 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 46/190 (24%), Positives = 85/190 (44%)
Query: 96 LTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR 155
L+GH ++ ASG D +++W++ + +GH+ G+ ++F D
Sbjct: 269 LSGHSDGVMCLQL--VRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF--DQC 324
Query: 156 WVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLET 215
++SG D +++W+ + + H + + F LL +GSAD TVK W
Sbjct: 325 KLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDST--LLVSGSADCTVKLWHFSG 382
Query: 216 FELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN-LKVYSWEPVICHDSVDMGWSTLGDLC 274
+ I + R V+++ D + SG DD+ +K++S E C + + L
Sbjct: 383 GKRI-TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLA 441
Query: 275 INDGKLLGCS 284
+ D +L CS
Sbjct: 442 LADSRLFSCS 451
Score = 169 (64.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 44/156 (28%), Positives = 74/156 (47%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H+ VN + I + +++G DD + +W++ T L + PV S+A A+ +
Sbjct: 391 HTGPVNSVRIIRDR-GLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLAL--ADSRL 447
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
+ + G IK WD+E+ K V TL GH + SG D +K+W+ +
Sbjct: 448 FSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAADHLR--LISGAHDGVVKVWEACE-- 503
Query: 134 CIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVW 169
C+HT K H+ + ++ D VVSG D + +W
Sbjct: 504 CVHTLKNHSEPVTSVALG-DCE-VVSGSEDGKIYLW 537
Score = 37 (18.1 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 14/61 (22%), Positives = 26/61 (42%)
Query: 775 NTPSQTIVNGAENKATKTPTQMRLKSSENQVTSTPPRARLNSSIEGQATNIPIRRRFNRN 834
N P+++ V+ + Q S + ++S P + S+I + NIP N +
Sbjct: 541 NAPNESPVSTQSVPISSLNGQRSNSSVQRALSSVPNYSSSLSNISTRNLNIPPSNANNDD 600
Query: 835 V 835
V
Sbjct: 601 V 601
>ZFIN|ZDB-GENE-050417-401 [details] [associations]
symbol:atg16l1 "ATG16 autophagy related 16-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050417-401 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
EMBL:CABZ01067234 EMBL:CABZ01067235 EMBL:CABZ01067236
EMBL:CABZ01067237 EMBL:CABZ01067238 EMBL:CU672237 IPI:IPI00995960
ProteinModelPortal:F1QGM8 Ensembl:ENSDART00000122085 Bgee:F1QGM8
Uniprot:F1QGM8
Length = 605
Score = 246 (91.7 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 78/273 (28%), Positives = 129/273 (47%)
Query: 8 LQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAI--GKPTALMSLCGLSSPVDSVA 65
L F AH VN + + R L TGG D++V LW + G+ +L G ++ + S+
Sbjct: 310 LHIFDAHDGEVNAVRFSPGS-RLLATGGMDRRVKLWEVVSGRCEPKGALTGSNAGITSIE 368
Query: 66 FDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLK 125
FDSA +LA ++ ++W +++ ++ TLTGH + F SG D LK
Sbjct: 369 FDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSARFLLDNARIVSGSYDRTLK 428
Query: 126 IWDIRKKGC-IHT-YKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFH 183
+WD+R K C + T + G + N I T + V+SG FD V+ WD++ + +
Sbjct: 429 LWDLRSKVCSMKTVFAGSS--CNDIVCTE--QCVMSGHFDKKVRFWDISYQNYHIQKQLN 484
Query: 184 E-GHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEV----TGVHAITFHPDG 238
+ + S+D + L T S D VK DL T + + + + +TF PDG
Sbjct: 485 KLCRVTSLDLNHDRTELLTCSRDDLVKIIDLRTNAVRQTFNAQGFKCGSDFTRVTFSPDG 544
Query: 239 RTLFSGFDDNLKVYSWEPVI--CHDSVDMGWST 269
+ +G D + +Y W + ++D G S+
Sbjct: 545 SFVAAGSADGV-LYLWNVLTGKLEKTLDKGHSS 576
Score = 174 (66.3 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 46/167 (27%), Positives = 75/167 (44%)
Query: 49 TALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVR--TLTGHKSNCTAV 106
TAL V++V F L+ G +KLW++ + LTG + T++
Sbjct: 308 TALHIFDAHDGEVNAVRFSPGSRLLATGGMDRRVKLWEVVSGRCEPKGALTGSNAGITSI 367
Query: 107 EFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVV 166
EF G + + D +IW + HT GH+ + + RF D +VSG +D +
Sbjct: 368 EFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSARFLLDNARIVSGSYDRTL 427
Query: 167 KVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDL 213
K+WDL + K+ G + D E + +G D+ V+FWD+
Sbjct: 428 KLWDLRS-KVCSMKTVFAGSSCN-DIVCTEQCVMSGHFDKKVRFWDI 472
Score = 158 (60.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 36/128 (28%), Positives = 56/128 (43%)
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIH--TYKGHTRGINT 147
S + H AV F P A+G MD +K+W++ C G GI +
Sbjct: 307 STALHIFDAHDGEVNAVRFSPGSRLLATGGMDRRVKLWEVVSGRCEPKGALTGSNAGITS 366
Query: 148 IRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRT 207
I F G ++++ D ++W + +L H H G + S F + +GS DRT
Sbjct: 367 IEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSARFLLDNARIVSGSYDRT 426
Query: 208 VKFWDLET 215
+K WDL +
Sbjct: 427 LKLWDLRS 434
>TAIR|locus:2157762 [details] [associations]
symbol:AT5G50230 "AT5G50230" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:BT011244 EMBL:BT020329 IPI:IPI00518229
RefSeq:NP_199834.2 UniGene:At.29744 ProteinModelPortal:Q6NNP0
SMR:Q6NNP0 PRIDE:Q6NNP0 EnsemblPlants:AT5G50230.1 GeneID:835088
KEGG:ath:AT5G50230 TAIR:At5g50230 InParanoid:Q6NNP0
PhylomeDB:Q6NNP0 ProtClustDB:CLSN2681670 Genevestigator:Q6NNP0
Uniprot:Q6NNP0
Length = 509
Score = 244 (91.0 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 60/196 (30%), Positives = 91/196 (46%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCG-LSSPVD-SVAFDSAEVLVLAGASTGVIKLWDLE 88
L TGG D+ V +W T + SL G L + +D +V D+ V+ A S+ + +WD+
Sbjct: 240 LFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVI--AATSSNNLFVWDVS 297
Query: 89 ESKMVRTLTGHKSNCTAVEFHPFGE-FFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINT 147
++ TLTGH AV+ F S D +K+WD+ K C +T T N
Sbjct: 298 SGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVL-FTSNCNA 356
Query: 148 IRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRT 207
I + DG V SG D +++WD+ GKLL + H + S+ + T D
Sbjct: 357 ICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNV 416
Query: 208 VKFWDLETFELIGSTR 223
+D T E+ G+ R
Sbjct: 417 HNVFDTRTLEICGTLR 432
Score = 181 (68.8 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 58/231 (25%), Positives = 100/231 (43%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV---AFDSAEVLVLAGASTGVIKLWDL 87
+I + +W + +L G + V +V F S V+ A T IKLWDL
Sbjct: 282 VIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRT--IKLWDL 339
Query: 88 EESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINT 147
+ T+ SNC A+ G SG MD NL++WDI+ + GH+ + +
Sbjct: 340 HKGYCTNTVL-FTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTS 398
Query: 148 IRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS----IDFHPLEFLLATGS 203
+ + +G +++ G DNV V+D ++ + + S P + +A GS
Sbjct: 399 VSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPDDDYVAAGS 458
Query: 204 ADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSW 254
AD +V W L ++ + + + + ++ G+ L S D N V +W
Sbjct: 459 ADGSVHVWSLSKGNIVSILKEQTSPILCCSWSGIGKPLASA-DKNGYVCTW 508
Score = 176 (67.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 46/200 (23%), Positives = 85/200 (42%)
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
S+ F+ + G +K+WD ++++L G N + + +
Sbjct: 230 SIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSN 289
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTP-DGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
NL +WD+ HT GHT + + + R VVS +D +K+WDL G +
Sbjct: 290 NLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVL 349
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDG-RT 240
F + +I + +G D ++ WD++T +L+ + V +++ +G R
Sbjct: 350 F-TSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRI 408
Query: 241 LFSGFDDNLKVYSWEPV-IC 259
L SG D+ V+ + IC
Sbjct: 409 LTSGRDNVHNVFDTRTLEIC 428
Score = 166 (63.5 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 45/166 (27%), Positives = 75/166 (45%)
Query: 90 SKMVRTLTGHKSNCTAVEF-HPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
S + H+ C ++ F + G F G D +K+WD I + G I +
Sbjct: 215 STCANRIHAHEGGCGSIVFEYNSGTLFTGG-QDRAVKMWDTNSGTLIKSLYGSLGNILDM 273
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSA-DRT 207
T D + V++ N + VWD+++G++ H H + ++D +A DRT
Sbjct: 274 AVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRT 333
Query: 208 VKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVY 252
+K WDL +T + +AI DG T+FSG D NL+++
Sbjct: 334 IKLWDLHK-GYCTNTVLFTSNCNAICLSIDGLTVFSGHMDGNLRLW 378
Score = 155 (59.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 45/202 (22%), Positives = 86/202 (42%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H+ V + + K + R +++ D+ + LW + K ++ +S +++ + V
Sbjct: 308 HTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVL-FTSNCNAICLSIDGLTV 366
Query: 74 LAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG 133
+G G ++LWD++ K++ + GH S T+V G + D ++D R
Sbjct: 367 FSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLE 426
Query: 134 CIHTYK--GHTRGINTIR--FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
T + G+ N R +PD +V +G D V VW L+ G ++ K I
Sbjct: 427 ICGTLRASGNRLASNWSRSCISPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILC 486
Query: 190 IDFHPLEFLLATGSADRTVKFW 211
+ + LA+ + V W
Sbjct: 487 CSWSGIGKPLASADKNGYVCTW 508
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 235 (87.8 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 67/246 (27%), Positives = 108/246 (43%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H A + + G + R L++ D K+ +W + ++ SS V + A+ + V
Sbjct: 54 HLAKIYAMHWGTDS-RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 74 LAGASTGVIKLWDLEES----KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI 129
G + ++ L+ ++ R L GH + F + S DT +WDI
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDI 171
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
T+ GHT + ++ PD R VSG D K+WD+ G F HE I +
Sbjct: 172 ETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESDINA 231
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFE--LIGSTRPEVTGVHAITFHPDGRTLFSGFDD 247
I F P ATGS D T + +DL + ++ S + G+ ++ F GR L +G+DD
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDD 291
Query: 248 -NLKVY 252
N V+
Sbjct: 292 FNCNVW 297
Score = 210 (79.0 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 61/233 (26%), Positives = 101/233 (43%)
Query: 30 FLITGGDDQKVNLWAI----GKPTALMSLCGLSSPVDSVAF-DSAEVLVLAGASTGVIKL 84
++ GG D +++++ G L G + + F D +++ +G +T L
Sbjct: 111 YVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT--CAL 168
Query: 85 WDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRG 144
WD+E + T GH + ++ P F SG D + K+WDIR+ C T+ GH
Sbjct: 169 WDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESD 228
Query: 145 INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEG---HIRSIDFHPLEFLLAT 201
IN I F P+G +G D +++DL A + L + H+ I S+ F LL
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMVYS-HDNIICGITSVAFSKSGRLLLA 287
Query: 202 GSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYS 253
G D WD + G V + DG + +G +D LK+++
Sbjct: 288 GYDDFNCNVWDTLKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 201 (75.8 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 64/261 (24%), Positives = 112/261 (42%)
Query: 72 LVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR- 130
L+++ + G + +WD + V + S + P G + A G +D I+ ++
Sbjct: 69 LLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYSLKT 128
Query: 131 KKGCIHTYK---GHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHI 187
++G + + GHT ++ RF D + V S G D +WD+ G+ F H G +
Sbjct: 129 REGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFAGHTGDV 187
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTG----VHAITFHPDGRTLFS 243
S+ P L +G+ D + K WD+ G R TG ++AI F P+G +
Sbjct: 188 MSLSLAPDTRLFVSGACDASAKLWDIRE----GMCRQTFTGHESDINAICFFPNGNAFAT 243
Query: 244 GFDD------NLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADV 297
G DD +L+ V HD++ G +++ G+LL + + +W D
Sbjct: 244 GSDDATCRLFDLRADQELMVYSHDNIICGITSVA--FSKSGRLLLAGYDDFNCNVW--DT 299
Query: 298 SHVEPYGVGAPEPDQSICTEV 318
+ GV A ++ C V
Sbjct: 300 LKADRAGVLAGHDNRVSCLGV 320
Score = 164 (62.8 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 39/168 (23%), Positives = 70/168 (41%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G + F H+ +V +S+ R ++G D LW I + + G S ++++
Sbjct: 174 GQQTTTFAGHTGDVMSLSLAPDT-RLFVSGACDASAKLWDIREGMCRQTFTGHESDINAI 232
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNC--TAVEFHPFGEFFASGCMDT 122
F G+ +L+DL + + + C T+V F G +G D
Sbjct: 233 CFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDF 292
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
N +WD K GH ++ + T DG V +G +D+ +K+W+
Sbjct: 293 NCNVWDTLKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 45/186 (24%), Positives = 76/186 (40%)
Query: 94 RTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPD 153
RTL GH + A+ + S D L IWD +H + + T + P
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 154 GRWVVSGGFDNVVKVWDLTA--G--KLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
G +V GG DN+ ++ L G ++ + H G++ F + + T S D T
Sbjct: 109 GNYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSSGDTTCA 167
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSWEPVICHDSVDMGWS 268
WD+ET + + V +++ PD R SG D + K++ +C + S
Sbjct: 168 LWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHES 227
Query: 269 TLGDLC 274
+ +C
Sbjct: 228 DINAIC 233
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 235 (87.8 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 67/246 (27%), Positives = 109/246 (44%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H A + + G + R L++ D K+ +W + ++ SS V + A+ + V
Sbjct: 54 HLAKIYAMHWGTDS-RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 74 LAGASTGVIKLWDLEES----KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI 129
G + +++L+ ++ R L GH + F + S DT +WDI
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDI 171
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
T+ GHT + ++ PD R VSG D K+WD+ G F HE I +
Sbjct: 172 ETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFE--LIGSTRPEVTGVHAITFHPDGRTLFSGFDD 247
I F P ATGS D T + +DL + ++ S + G+ ++ F GR L +G+DD
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDD 291
Query: 248 -NLKVY 252
N V+
Sbjct: 292 FNCNVW 297
Score = 206 (77.6 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 60/233 (25%), Positives = 100/233 (42%)
Query: 30 FLITGGDDQKVNLWAI----GKPTALMSLCGLSSPVDSVAF-DSAEVLVLAGASTGVIKL 84
++ GG D +++ + G L G + + F D +++ +G +T L
Sbjct: 111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT--CAL 168
Query: 85 WDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRG 144
WD+E + T GH + ++ P F SG D + K+WD+R+ C T+ GH
Sbjct: 169 WDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228
Query: 145 INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEG---HIRSIDFHPLEFLLAT 201
IN I F P+G +G D +++DL A + L + H+ I S+ F LL
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMVYS-HDNIICGITSVAFSKSGRLLLA 287
Query: 202 GSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKVYS 253
G D WD + G V + DG + +G +D LK+++
Sbjct: 288 GYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 201 (75.8 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 64/261 (24%), Positives = 113/261 (43%)
Query: 72 LVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR- 130
L+++ + G + +WD + V + S + P G + A G +D I++++
Sbjct: 69 LLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT 128
Query: 131 KKGCIHTYK---GHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHI 187
++G + + GHT ++ RF D + V S G D +WD+ G+ F H G +
Sbjct: 129 REGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFAGHTGDV 187
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTG----VHAITFHPDGRTLFS 243
S+ P L +G+ D + K WD+ G R TG ++AI F P+G +
Sbjct: 188 MSLSLAPDTRLFVSGACDASAKLWDVRE----GMCRQTFTGHESDINAICFFPNGNAFAT 243
Query: 244 GFDD------NLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADV 297
G DD +L+ V HD++ G +++ G+LL + + +W D
Sbjct: 244 GSDDATCRLFDLRADQELMVYSHDNIICGITSVA--FSKSGRLLLAGYDDFNCNVW--DA 299
Query: 298 SHVEPYGVGAPEPDQSICTEV 318
+ GV A ++ C V
Sbjct: 300 LKADRAGVLAGHDNRVSCLGV 320
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 38/168 (22%), Positives = 70/168 (41%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G + F H+ +V +S+ R ++G D LW + + + G S ++++
Sbjct: 174 GQQTTTFAGHTGDVMSLSLAPDT-RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAI 232
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNC--TAVEFHPFGEFFASGCMDT 122
F G+ +L+DL + + + C T+V F G +G D
Sbjct: 233 CFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDF 292
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWD 170
N +WD K GH ++ + T DG V +G +D+ +K+W+
Sbjct: 293 NCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/186 (24%), Positives = 77/186 (41%)
Query: 94 RTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPD 153
RTL GH + A+ + S D L IWD +H + + T + P
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 154 GRWVVSGGFDNVVKVWDLTA--G--KLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
G +V GG DN+ +++L G ++ + H G++ F + + T S D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSSGDTTCA 167
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSWEPVICHDSVDMGWS 268
WD+ET + + V +++ PD R SG D + K++ +C + S
Sbjct: 168 LWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHES 227
Query: 269 TLGDLC 274
+ +C
Sbjct: 228 DINAIC 233
>FB|FBgn0039705 [details] [associations]
symbol:Atg16 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0010506 "regulation of
autophagy" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE HSSP:Q04724 UniGene:Dm.20800 GeneID:326115
KEGG:dme:Dmel_CG31033 FlyBase:FBgn0039705 GenomeRNAi:326115
NextBio:847128 EMBL:BT024267 RefSeq:NP_733313.2 SMR:Q86BR6
IntAct:Q86BR6 MINT:MINT-293011 STRING:Q86BR6
EnsemblMetazoa:FBtr0085528 UCSC:CG31033-RC InParanoid:Q86BR6
Uniprot:Q86BR6
Length = 604
Score = 245 (91.3 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 82/301 (27%), Positives = 133/301 (44%)
Query: 8 LQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGK----PTALMSLCGLSSPVDS 63
L +F AH + + R + TGG D+KV LW IGK P A++S G S+ ++S
Sbjct: 311 LMKFEAHENESHAVRWSPVE-RMVATGGADRKVKLWDIGKNSTEPRAVLS--GSSAGINS 367
Query: 64 VAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN 123
V FDS +L ++ ++W + ++++ TLTGH A ++ +G D
Sbjct: 368 VDFDSTGAYILGTSNDYGARVWTVMDNRLRHTLTGHSGKVMAAKYVQEPIKVVTGSHDRT 427
Query: 124 LKIWDIRKKGCIHTYKGHTRGINTIRFTPD-GRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
LKIWD+R CI T K N + T G ++SG +D ++ WD+ K D
Sbjct: 428 LKIWDLRSIACIET-KFAGSSCNDLVTTDSLGSTIISGHYDKKIRFWDIRTEKQADDVLM 486
Query: 183 HEGHIRSIDFHP-LEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHA----ITFHPD 237
I S+D +L+ + D T+K DL ++I + E + +F+
Sbjct: 487 -PAKITSLDLSKDCNYLICS-VRDDTIKLLDLRKNQVISTFTNEHFKISCDFARASFNSS 544
Query: 238 GRTLFSGFDDNLKVYSW------EPVIC-HDSV--DMGWSTLGDLCINDGKLLGCSFYRN 288
G + G D +Y W E + H + + WS ++ + GK C+ Y
Sbjct: 545 GLKIACGSADGA-IYIWNVNGFLEATLKGHSTAVNAVSWSPNNNMLASVGKNKRCTIYSE 603
Query: 289 S 289
S
Sbjct: 604 S 604
Score = 193 (73.0 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 52/199 (26%), Positives = 86/199 (43%)
Query: 63 SVAFDSAEVLVLAGASTGVIK----LWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASG 118
S F + E+ + AS +K L +K++ H++ AV + P A+G
Sbjct: 277 SARFTAGEIAENSRASIDTLKATGYLGQANPTKILMKFEAHENESHAVRWSPVERMVATG 336
Query: 119 CMDTNLKIWDIRKKGCIH--TYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKL 176
D +K+WDI K G + GIN++ F G +++ D +VW + +L
Sbjct: 337 GADRKVKLWDIGKNSTEPRAVLSGSSAGINSVDFDSTGAYILGTSNDYGARVWTVMDNRL 396
Query: 177 LHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHP 236
H H G + + + + TGS DRT+K WDL + I + + +T
Sbjct: 397 RHTLTGHSGKVMAAKYVQEPIKVVTGSHDRTLKIWDLRSIACIETKFAGSSCNDLVTTDS 456
Query: 237 DGRTLFSGFDDNLKVYSWE 255
G T+ SG D K+ W+
Sbjct: 457 LGSTIISGHYDK-KIRFWD 474
>DICTYBASE|DDB_G0275323 [details] [associations]
symbol:tipD "autophagy protein 16" species:44689
"Dictyostelium discoideum" [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0034274 "Atg12-Atg5-Atg16 complex"
evidence=ISS] [GO:0019776 "Atg8 ligase activity" evidence=ISS]
[GO:0016236 "macroautophagy" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275323
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 OMA:LETECQE
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0031154
GO:GO:0016236 GO:GO:0034274 GO:GO:0019776 EMBL:AF019236 PIR:T08602
RefSeq:XP_643673.1 ProteinModelPortal:O15736 STRING:O15736
EnsemblProtists:DDB0215341 GeneID:8619939 KEGG:ddi:DDB_G0275323
ProtClustDB:CLSZ2729185 Uniprot:O15736
Length = 612
Score = 245 (91.3 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 69/253 (27%), Positives = 115/253 (45%)
Query: 9 QEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDS 68
+ + H++ + C++ L TGG D+ V +W + +L G S + SV+F
Sbjct: 318 KRWTGHNSEIYCMAFNSIG-NLLATGGGDKCVKVWDVISGQQKSTLLGASQSIVSVSFSP 376
Query: 69 AEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWD 128
+ +L ++ +LW+ E + TLTGH +F +G D +K+WD
Sbjct: 377 NDESILGTSNDNSARLWNTELGRSRHTLTGHIGKVYTGKFINSNRV-VTGSHDRTIKLWD 435
Query: 129 IRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK-FHEGHI 187
++K C T + + + G + SG D+ V+ WD AG+ HEG I
Sbjct: 436 LQKGYCTRTIFCFSSCNDLVILGGSGTHLASGHVDHSVRFWDSNAGEPTQVLSSIHEGQI 495
Query: 188 RSIDFHPLEF-LLATGSADRTVKFWDLETFELIGSTR-PEV-TGVH--AITFHPDGRTLF 242
SI P + T S D T+K D+ TF+ I + + PE G++ ++ PDGR +
Sbjct: 496 TSITNSPTNTNQILTNSRDHTLKIIDIRTFDTIRTFKDPEYRNGLNWTKASWSPDGRYIA 555
Query: 243 SGFDDNLKVYSWE 255
SG D + W+
Sbjct: 556 SGSIDG-SICIWD 567
Score = 173 (66.0 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 47/191 (24%), Positives = 84/191 (43%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
++TG D+ + LW + K ++ SS D V + + +G ++ WD
Sbjct: 422 VVTGSHDRTIKLWDLQKGYCTRTIFCFSSCNDLVILGGSGTHLASGHVDHSVRFWDSNAG 481
Query: 91 KMVRTLTG-HKSNCTAVEFHPFG-EFFASGCMDTNLKIWDIRKKGCIHTYKG--HTRGIN 146
+ + L+ H+ T++ P + D LKI DIR I T+K + G+N
Sbjct: 482 EPTQVLSSIHEGQITSITNSPTNTNQILTNSRDHTLKIIDIRTFDTIRTFKDPEYRNGLN 541
Query: 147 TIR--FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF-KFHEG--HIRSIDFHPLEFLLAT 201
+ ++PDGR++ SG D + +WD T GK + K H + + PL + +
Sbjct: 542 WTKASWSPDGRYIASGSIDGSICIWDATNGKTVKVLTKVHNNGSSVCCCSWSPLANIFIS 601
Query: 202 GSADRTVKFWD 212
D+ + W+
Sbjct: 602 ADKDKNIIQWE 612
Score = 169 (64.5 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 41/148 (27%), Positives = 70/148 (47%)
Query: 67 DSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKI 126
D+ +V + GV + SK + TGH S + F+ G A+G D +K+
Sbjct: 291 DANDVPIPIVLERGVFSSEAMLPSKAKKRWTGHNSEIYCMAFNSIGNLLATGGGDKCVKV 350
Query: 127 WDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGH 186
WD+ T G ++ I ++ F+P+ ++ DN ++W+ G+ H H G
Sbjct: 351 WDVISGQQKSTLLGASQSIVSVSFSPNDESILGTSNDNSARLWNTELGRSRHTLTGHIGK 410
Query: 187 IRSIDFHPLEFLLATGSADRTVKFWDLE 214
+ + F ++ TGS DRT+K WDL+
Sbjct: 411 VYTGKFINSNRVV-TGSHDRTIKLWDLQ 437
Score = 128 (50.1 bits), Expect = 0.00023, P = 0.00023
Identities = 51/198 (25%), Positives = 85/198 (42%)
Query: 138 YKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL-E 196
+ GH I + F G + +GG D VKVWD+ +G+ I S+ F P E
Sbjct: 320 WTGHNSEIYCMAFNSIGNLLATGGGDKCVKVWDVISGQQKSTLLGASQSIVSVSFSPNDE 379
Query: 197 FLLATGSADRTVKFWDLETFELIGSTRPEVTG----VHAITFHPDGRTLFSGFDDNLKVY 252
+L T S D + + W+ E +G +R +TG V+ F R + D +K++
Sbjct: 380 SILGT-SNDNSARLWNTE----LGRSRHTLTGHIGKVYTGKFINSNRVVTGSHDRTIKLW 434
Query: 253 SWEPVICHDSVDMGWSTLGDLCI--NDGKLLGCSFYRNSVGIWVADVSHVEPYGVGAPEP 310
+ C ++ +S+ DL I G L +SV W D + EP V +
Sbjct: 435 DLQKGYCTRTI-FCFSSCNDLVILGGSGTHLASGHVDHSVRFW--DSNAGEPTQVLSSIH 491
Query: 311 DQSICTEVKFNPPGSHSL 328
+ I T + +P ++ +
Sbjct: 492 EGQI-TSITNSPTNTNQI 508
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 245 (91.3 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 66/242 (27%), Positives = 103/242 (42%)
Query: 2 AKRGYKLQE-FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSP 60
AK YKL+ F H V+C+S+ L++ G+D+ + + K L++ G +
Sbjct: 338 AKFDYKLKNIFRLHELPVSCVSMQPHK-DILVSCGEDRLWKVLGLPKCNVLLTGFGHTDW 396
Query: 61 VDSVAFD-SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGC 119
+ F S + L + T +KLWDL + + T GH + +H G F AS
Sbjct: 397 LSDCCFHPSGDKLATSSGDT-TVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSS 455
Query: 120 MDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHD 179
+D KIWD+ + C T GHT +N+I F P +++ D + +WD G
Sbjct: 456 LDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQS 515
Query: 180 FKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGR 239
H I F P ++A+ A K WD I S + + + F GR
Sbjct: 516 LYGHMHSINDAIFDPRGHMIASCDACGVTKLWDFRKLLPIVSIDIGPSPGNEVNFDSSGR 575
Query: 240 TL 241
L
Sbjct: 576 VL 577
Score = 232 (86.7 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 66/226 (29%), Positives = 92/226 (40%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
L T D V LW + K +++ G S V S + S V + + K+WD+
Sbjct: 409 LATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSE 468
Query: 91 KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRF 150
+ TL GH + ++EF PF + D L IWD R C + GH IN F
Sbjct: 469 RCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSLYGHMHSINDAIF 528
Query: 151 TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHI--RSIDFHPLEFLLATGSADRTV 208
P G + S V K+WD KLL G ++F +LA S + +
Sbjct: 529 DPRGHMIASCDACGVTKLWDFR--KLLPIVSIDIGPSPGNEVNFDSSGRVLAQASGNGVI 586
Query: 209 KFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSW 254
DL++ E I H + F DG LFSG D V +W
Sbjct: 587 HLLDLKSGE-IHKLMGHENEAHTVVFSHDGEILFSGGSDGT-VRTW 630
Score = 228 (85.3 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 58/209 (27%), Positives = 99/209 (47%)
Query: 60 PVDSVAFDS-AEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASG 118
PV V+ ++LV G + K+ L + ++ T GH + FHP G+ A+
Sbjct: 354 PVSCVSMQPHKDILVSCGEDR-LWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGDKLATS 412
Query: 119 CMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLH 178
DT +K+WD+ K CI T++GH+R + + + G +V S D K+WD+ + +
Sbjct: 413 SGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSERCRC 472
Query: 179 DFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDG 238
H + SI+F P L T SAD+T+ WD T S + ++ F P G
Sbjct: 473 TLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSLYGHMHSINDAIFDPRG 532
Query: 239 RTLFSGFDDNL-KVYSWEPVICHDSVDMG 266
+ S + K++ + ++ S+D+G
Sbjct: 533 HMIASCDACGVTKLWDFRKLLPIVSIDIG 561
Score = 163 (62.4 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 45/167 (26%), Positives = 72/167 (43%)
Query: 99 HKSNCTAVEFHPFGEFFASGCMDTNL-KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWV 157
H+ + V P + S C + L K+ + K + T GHT ++ F P G +
Sbjct: 351 HELPVSCVSMQPHKDILVS-CGEDRLWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGDKL 409
Query: 158 VSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFE 217
+ D VK+WDL G + F+ H + S +H +A+ S D+T K WD+ +
Sbjct: 410 ATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSER 469
Query: 218 LIGSTRPEVTGVHAITFHPDGRTLF-SGFDDNLKVYSWEPVICHDSV 263
+ V++I F P TL S D L ++ IC S+
Sbjct: 470 CRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSL 516
>RGD|1359321 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta polypeptide 4" species:10116 "Rattus norvegicus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0044297 "cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 RGD:1359321 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
GO:GO:0044297 PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 EMBL:AY552804 EMBL:BC097370 EMBL:AF022085 IPI:IPI00422067
RefSeq:NP_001013932.1 UniGene:Rn.10844 ProteinModelPortal:O35353
SMR:O35353 IntAct:O35353 STRING:O35353 PhosphoSite:O35353
PRIDE:O35353 GeneID:294962 KEGG:rno:294962 UCSC:RGD:1359321
InParanoid:O35353 NextBio:638784 ArrayExpress:O35353
Genevestigator:O35353 Uniprot:O35353
Length = 340
Score = 234 (87.4 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 65/246 (26%), Positives = 111/246 (45%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H A + + G + R L++ D K+ +W + ++ SS V + A+ + V
Sbjct: 54 HLAKIYAMHWGYDS-RLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYV 112
Query: 74 LAGASTGVIKLWDLEES----KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI 129
G + +++L+ ++ R L GH + F G+ S DT +WDI
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSG-DTTCALWDI 171
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
T+ GH+ + ++ +PD + VSG D K+WD+ G F H I +
Sbjct: 172 ETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINA 231
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFE--LIGSTRPEVTGVHAITFHPDGRTLFSGFDD 247
+ F P + ATGS D T + +DL + L+ S + G+ ++ F GR L +G+DD
Sbjct: 232 VSFFPSGYAFATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDD 291
Query: 248 -NLKVY 252
N V+
Sbjct: 292 FNCSVW 297
Score = 198 (74.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 56/211 (26%), Positives = 94/211 (44%)
Query: 9 QEFVAHSANVNCISIGKKACRFL-----ITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
+E H+ ++C CRFL IT D LW I + G S V S
Sbjct: 137 RELPGHTGYLSC-------CRFLDDGQIITSSGDTTCALWDIETGQQTTTFTGHSGDVMS 189
Query: 64 VAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN 123
++ ++GA KLWD+ + ++ TGH S+ AV F P G FA+G D
Sbjct: 190 LSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFATGSDDAT 249
Query: 124 LKIWDIR--KKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+++D+R ++ ++++ GI ++ F+ GR +++G D VWD G
Sbjct: 250 CRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRAGVLA 309
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
H+ + + +ATGS D ++ W+
Sbjct: 310 GHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 193 (73.0 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 52/191 (27%), Positives = 84/191 (43%)
Query: 67 DSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKI 126
D +++ +G +T LWD+E + T TGH + ++ P + F SG D + K+
Sbjct: 153 DDGQIITSSGDTT--CALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKL 210
Query: 127 WDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEG- 185
WDIR C ++ GH IN + F P G +G D +++DL A + L + H+
Sbjct: 211 WDIRDGMCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDLRADQELLLYS-HDNI 269
Query: 186 --HIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS 243
I S+ F LL G D WD G V + DG + +
Sbjct: 270 ICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRAGVLAGHDNRVSCLGVTDDGMAVAT 329
Query: 244 G-FDDNLKVYS 253
G +D L++++
Sbjct: 330 GSWDSFLRIWN 340
Score = 192 (72.6 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 53/240 (22%), Positives = 107/240 (44%)
Query: 66 FDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLK 125
+DS L+++ + G + +WD + + + S + P G + A G +D
Sbjct: 65 YDSR--LLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICS 122
Query: 126 IWDIR-KKGCIHTYK---GHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
I++++ ++G + + GHT ++ RF DG+ + S G D +WD+ G+ F
Sbjct: 123 IYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSG-DTTCALWDIETGQQTTTFT 181
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTL 241
H G + S+ P +G+ D + K WD+ S ++ ++A++F P G
Sbjct: 182 GHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAF 241
Query: 242 FSGFDD-NLKVYSWEP-----VICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVA 295
+G DD +++ + HD++ G +++ G+LL + + +W A
Sbjct: 242 ATGSDDATCRLFDLRADQELLLYSHDNIICGITSVA--FSKSGRLLLAGYDDFNCSVWDA 299
Score = 156 (60.0 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 44/174 (25%), Positives = 74/174 (42%)
Query: 94 RTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPD 153
RTL GH + A+ + S D L IWD +H + + T + P
Sbjct: 49 RTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPS 108
Query: 154 GRWVVSGGFDNVVKVWDLTA--G--KLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
G +V GG DN+ +++L G ++ + H G++ F + + T S D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLD-DGQIITSSGDTTCA 167
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSWEPVICHDS 262
WD+ET + + V +++ PD +T SG D + K++ +C S
Sbjct: 168 LWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQS 221
>MGI|MGI:104581 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta 4" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISA] [GO:0006184 "GTP catabolic process" evidence=ISA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0044297 "cell body" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 MGI:MGI:104581
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 OMA:GACDATS EMBL:S86124 EMBL:M87286 EMBL:M63658
EMBL:AF277893 EMBL:AF501886 EMBL:AK036816 EMBL:AK152227
EMBL:AK167416 EMBL:BC028753 IPI:IPI00310220 PIR:JS0669
RefSeq:NP_038559.2 UniGene:Mm.139192 ProteinModelPortal:P29387
SMR:P29387 DIP:DIP-604N IntAct:P29387 STRING:P29387
PhosphoSite:P29387 REPRODUCTION-2DPAGE:P29387 PaxDb:P29387
PRIDE:P29387 Ensembl:ENSMUST00000108234 Ensembl:ENSMUST00000155737
GeneID:14696 KEGG:mmu:14696 InParanoid:P29387 NextBio:286647
Bgee:P29387 Genevestigator:P29387 GermOnline:ENSMUSG00000027669
Uniprot:P29387
Length = 340
Score = 234 (87.4 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 65/246 (26%), Positives = 111/246 (45%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H A + + G + R L++ D K+ +W + ++ SS V + A+ + V
Sbjct: 54 HLAKIYAMHWGYDS-RLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYV 112
Query: 74 LAGASTGVIKLWDLEES----KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI 129
G + +++L+ ++ R L GH + F G+ S DT +WDI
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSG-DTTCALWDI 171
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
T+ GH+ + ++ +PD + VSG D K+WD+ G F H I +
Sbjct: 172 ETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINA 231
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFE--LIGSTRPEVTGVHAITFHPDGRTLFSGFDD 247
+ F P + ATGS D T + +DL + L+ S + G+ ++ F GR L +G+DD
Sbjct: 232 VSFFPSGYAFATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDD 291
Query: 248 -NLKVY 252
N V+
Sbjct: 292 FNCSVW 297
Score = 197 (74.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 56/211 (26%), Positives = 94/211 (44%)
Query: 9 QEFVAHSANVNCISIGKKACRFL-----ITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
+E H+ ++C CRFL IT D LW I + G S V S
Sbjct: 137 RELPGHTGYLSC-------CRFLDDGQIITSSGDTTCALWDIETGQQTTTFTGHSGDVMS 189
Query: 64 VAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN 123
++ ++GA KLWD+ + ++ TGH S+ AV F P G FA+G D
Sbjct: 190 LSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFATGSDDAT 249
Query: 124 LKIWDIR--KKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+++D+R ++ ++++ GI ++ F+ GR +++G D VWD G
Sbjct: 250 CRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRSGVLA 309
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
H+ + + +ATGS D ++ W+
Sbjct: 310 GHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 192 (72.6 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 52/191 (27%), Positives = 84/191 (43%)
Query: 67 DSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKI 126
D +++ +G +T LWD+E + T TGH + ++ P + F SG D + K+
Sbjct: 153 DDGQIITSSGDTT--CALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKL 210
Query: 127 WDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEG- 185
WDIR C ++ GH IN + F P G +G D +++DL A + L + H+
Sbjct: 211 WDIRDGMCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDLRADQELLLYS-HDNI 269
Query: 186 --HIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS 243
I S+ F LL G D WD G V + DG + +
Sbjct: 270 ICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRSGVLAGHDNRVSCLGVTDDGMAVAT 329
Query: 244 G-FDDNLKVYS 253
G +D L++++
Sbjct: 330 GSWDSFLRIWN 340
Score = 192 (72.6 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 53/240 (22%), Positives = 107/240 (44%)
Query: 66 FDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLK 125
+DS L+++ + G + +WD + + + S + P G + A G +D
Sbjct: 65 YDSR--LLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICS 122
Query: 126 IWDIR-KKGCIHTYK---GHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
I++++ ++G + + GHT ++ RF DG+ + S G D +WD+ G+ F
Sbjct: 123 IYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSG-DTTCALWDIETGQQTTTFT 181
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTL 241
H G + S+ P +G+ D + K WD+ S ++ ++A++F P G
Sbjct: 182 GHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAF 241
Query: 242 FSGFDD-NLKVYSWEP-----VICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVA 295
+G DD +++ + HD++ G +++ G+LL + + +W A
Sbjct: 242 ATGSDDATCRLFDLRADQELLLYSHDNIICGITSVA--FSKSGRLLLAGYDDFNCSVWDA 299
Score = 156 (60.0 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 44/174 (25%), Positives = 74/174 (42%)
Query: 94 RTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPD 153
RTL GH + A+ + S D L IWD +H + + T + P
Sbjct: 49 RTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPS 108
Query: 154 GRWVVSGGFDNVVKVWDLTA--G--KLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
G +V GG DN+ +++L G ++ + H G++ F + + T S D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLD-DGQIITSSGDTTCA 167
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSWEPVICHDS 262
WD+ET + + V +++ PD +T SG D + K++ +C S
Sbjct: 168 LWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQS 221
>DICTYBASE|DDB_G0290687 [details] [associations]
symbol:mhkC "myosin heavy chain kinase C"
species:44689 "Dictyostelium discoideum" [GO:0031037 "myosin II
filament disassembly" evidence=IMP] [GO:0005826 "actomyosin
contractile ring" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IMP] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0005938 "cell cortex" evidence=IEA;IDA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;ISS;IDA] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0045159 "myosin II
binding" evidence=ISS] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0032154 "cleavage furrow"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0290687
GO:GO:0005524 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
GO:GO:0000910 GO:GO:0005826 GO:GO:0018107 GO:GO:0032154 HSSP:P16649
BRENDA:2.7.11.7 EMBL:AAFI02000166 GO:GO:0031037 GO:GO:0045159
GO:GO:0016905 ProtClustDB:CLSZ2846619 EMBL:AB079663 EMBL:AF079447
RefSeq:XP_635600.1 ProteinModelPortal:Q8MY12
EnsemblProtists:DDB0216199 GeneID:8627781 KEGG:ddi:DDB_G0290687
OMA:NTRSSIL Uniprot:Q8MY12
Length = 780
Score = 246 (91.7 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 64/227 (28%), Positives = 117/227 (51%)
Query: 31 LITGGDDQKVNLW-AIG-KPTALMSLCGLS--SPVDSVAFDSAEVLVLAGASTGVIKLWD 86
L +G +D ++ +W A+ K + G S + + FD + ++ AGA + ++K WD
Sbjct: 524 LYSGSNDGQIGVWDAVELKHVTNIKAHGKSIRAVIKRPGFD--QNILTAGADS-LVKEWD 580
Query: 87 LEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGIN 146
+ + ++ + +SN F + +GC D +K+WD+R C+ T GHTR I
Sbjct: 581 INTQQTIKEIK--ESNEVNTIFIQDNLLY-TGCNDKTVKVWDMRSYECVKTLSGHTRAIK 637
Query: 147 TIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADR 206
++ G + SG D + VW+L G +L +F+ HEG ++++ H +L +GS D
Sbjct: 638 SV--CAMGNLLFSGSNDQQIYVWNLATGTILTNFQGHEGWVKTLYAH--NNMLYSGSHDE 693
Query: 207 TVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYS 253
T++ WDL+T + + + + T H + +F+G D L+V+S
Sbjct: 694 TIRIWDLKTTRCVNTIKCKD---RVETLHVTNQGIFAGSGDWLQVFS 737
Score = 170 (64.9 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 45/172 (26%), Positives = 80/172 (46%)
Query: 85 WDLEESKMVRTLTGHKSNC-TAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTR 143
WDL K + T+ G +S C T + SG D + +WD + + K H +
Sbjct: 498 WDLTSIKNIDTVRGLQSECITGDSLRLY-----SGSNDGQIGVWDAVELKHVTNIKAHGK 552
Query: 144 GINTIRFTPD-GRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATG 202
I + P + +++ G D++VK WD+ + + + K + +I + LL TG
Sbjct: 553 SIRAVIKRPGFDQNILTAGADSLVKEWDINTQQTIKEIK-ESNEVNTIFIQ--DNLLYTG 609
Query: 203 SADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSW 254
D+TVK WD+ ++E + + + ++ G LFSG +D ++Y W
Sbjct: 610 CNDKTVKVWDMRSYECVKTLSGHTRAIKSVCAM--GNLLFSGSNDQ-QIYVW 658
Score = 169 (64.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 53/244 (21%), Positives = 104/244 (42%)
Query: 13 AHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVL 72
AH ++ + + ++T G D V W I + + S+ V+++ + L
Sbjct: 549 AHGKSIRAVIKRPGFDQNILTAGADSLVKEWDINTQQTIKEIKE-SNEVNTIFIQ--DNL 605
Query: 73 VLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKK 132
+ G + +K+WD+ + V+TL+GH +V G SG D + +W++
Sbjct: 606 LYTGCNDKTVKVWDMRSYECVKTLSGHTRAIKSV--CAMGNLLFSGSNDQQIYVWNLATG 663
Query: 133 GCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDF 192
+ ++GH + T+ + SG D +++WDL + ++ K + R
Sbjct: 664 TILTNFQGHEGWVKTLY--AHNNMLYSGSHDETIRIWDLKTTRCVNTIKCKD---RVETL 718
Query: 193 HPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSG-FDDNLKV 251
H + GS D ++ + + +E + S T + + LF+G NLKV
Sbjct: 719 HVTNQGIFAGSGD-WLQVFSHDKYENLASLN---TRSSILCLWRNQNQLFTGSLASNLKV 774
Query: 252 YSWE 255
+SW+
Sbjct: 775 WSWD 778
>TAIR|locus:2028481 [details] [associations]
symbol:SCD1 "STOMATAL CYTOKINESIS-DEFECTIVE 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA;IMP] [GO:0009825 "multidimensional cell growth"
evidence=IMP] [GO:0010052 "guard cell differentiation"
evidence=IMP] [GO:0010235 "guard mother cell cytokinesis"
evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0009825 HSSP:P16649 GO:GO:0080008 InterPro:IPR005112
InterPro:IPR001194 InterPro:IPR005113 Pfam:PF03455 Pfam:PF02141
Pfam:PF03456 SMART:SM00801 SMART:SM00799 SMART:SM00800
PROSITE:PS50947 PROSITE:PS50211 PROSITE:PS50946 EMBL:AY082605
IPI:IPI00522154 RefSeq:NP_850959.1 UniGene:At.38309
ProteinModelPortal:Q8RXA7 SMR:Q8RXA7 PaxDb:Q8RXA7 PRIDE:Q8RXA7
EnsemblPlants:AT1G49040.1 GeneID:841327 KEGG:ath:AT1G49040
TAIR:At1g49040 HOGENOM:HOG000029412 InParanoid:Q8RXA7 OMA:YRNFIEN
PhylomeDB:Q8RXA7 ProtClustDB:CLSN2680426 Genevestigator:Q8RXA7
GO:GO:0010235 Uniprot:Q8RXA7
Length = 1187
Score = 248 (92.4 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 64/210 (30%), Positives = 100/210 (47%)
Query: 4 RGYKLQEFV-AHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVD 62
RG +L+ + H+ V IS + +++G DD V +W L L G S V
Sbjct: 887 RGSELRATLKGHTGTVRAISSDRGK---IVSGSDDLSVIVWDKQTTQLLEELKGHDSQVS 943
Query: 63 SVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
V S E VL A G +K+WD+ V T+ S ++E+ A+ DT
Sbjct: 944 CVKMLSGE-RVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDT 1002
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKF 182
IWDIR +H KGHT+ I +IR D +++G D +VW ++ G
Sbjct: 1003 VANIWDIRSGKQMHKLKGHTKWIRSIRMVEDT--LITGSDDWTARVWSVSRGSCDAVLAC 1060
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
H G ++S+++ P + + TGSAD ++FW+
Sbjct: 1061 HAGPVQSVEYSPFDKGIITGSADGLLRFWE 1090
Score = 229 (85.7 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 68/282 (24%), Positives = 129/282 (45%)
Query: 20 CISIG-KKACRFLITGGDDQKVNLW--AIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAG 76
C +G ++ F I+G D V +W ++ +L G + V +++ D +++ +G
Sbjct: 858 CDLVGDREDAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAISSDRGKIV--SG 915
Query: 77 ASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIH 136
+ + +WD + ++++ L GH S + V+ GE + D +K+WD+R C+
Sbjct: 916 SDDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLS-GERVLTAAHDGTVKMWDVRTDMCVA 974
Query: 137 TYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLE 196
T + I ++ + + + G D V +WD+ +GK +H K H IRSI +E
Sbjct: 975 TVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRM--VE 1032
Query: 197 FLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEP 256
L TGS D T + W + V ++ + P + + +G D L + WE
Sbjct: 1033 DTLITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDKGIITGSADGLLRF-WE- 1090
Query: 257 VICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVADVS 298
+D + G + ++ ++ +L + N +GI AD S
Sbjct: 1091 ---ND--EGGIKCVKNITLHSSSILSINAGENWLGIGAADNS 1127
Score = 183 (69.5 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 46/209 (22%), Positives = 95/209 (45%)
Query: 8 LQEFVAHSANVNCISI--GKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVA 65
L+E H + V+C+ + G++ ++T D V +W + + ++ SS + S+
Sbjct: 932 LEELKGHDSQVSCVKMLSGER----VLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLE 987
Query: 66 FD-SAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
+D S +L AG T V +WD+ K + L GH ++ + +G D
Sbjct: 988 YDDSTGILAAAGRDT-VANIWDIRSGKQMHKLKGHTKWIRSIRM--VEDTLITGSDDWTA 1044
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAG--KLLHDFKF 182
++W + + C H + ++ ++P + +++G D +++ W+ G K + +
Sbjct: 1045 RVWSVSRGSCDAVLACHAGPVQSVEYSPFDKGIITGSADGLLRFWENDEGGIKCVKNITL 1104
Query: 183 HEGHIRSIDFHPLEFLLATGSADRTVKFW 211
H I SI+ E L G+AD ++ +
Sbjct: 1105 HSSSILSINAG--ENWLGIGAADNSMSLF 1131
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 242 (90.2 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 54/227 (23%), Positives = 106/227 (46%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
+++TG D + W ++ V ++F ++ + + +K+WD
Sbjct: 21 WMVTGDDGGAIKYWQSNMNNVKVNKTAHRESVRDLSFCRTDLKFCSCSDDTTVKVWDFAR 80
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
+ R+LTGH + +V++HP SG D +K+WD + + ++ GH + ++
Sbjct: 81 CQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDYLVKLWDAKSGRELRSFHGHKNIVQCVK 140
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPL-EFLLATGSADRTV 208
+ +G WV++ D ++K++D+ + K L F+ H + ++ +HP E +GS D +
Sbjct: 141 WNQNGNWVLTASKDQIIKLYDIRSMKELESFRGHNKDVTALAWHPFHEEYFVSGSYDGAI 200
Query: 209 KFWDLETFELIGSTRP--EVTGVHA-----ITFHPDGRTLFSGFDDN 248
W L+G P E+ H + +HP G L SG +D+
Sbjct: 201 FHW------LVGHETPQIEINNAHDNSVWDLAWHPVGYLLCSGGNDH 241
Score = 210 (79.0 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 69/264 (26%), Positives = 116/264 (43%)
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
V S+ + + E ++ G G IK W + + T H+ + + F F S
Sbjct: 10 VRSMIWSNNENWMVTGDDGGAIKYWQSNMNNVKVNKTAHRESVRDLSFCRTDLKFCSCSD 69
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF 180
DT +K+WD + + GH + ++ + P +VSGG D +VK+WD +G+ L F
Sbjct: 70 DTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDYLVKLWDAKSGRELRSF 129
Query: 181 KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRT 240
H+ ++ + ++ + T S D+ +K +D+ + + + S R V A+ +HP
Sbjct: 130 HGHKNIVQCVKWNQNGNWVLTASKDQIIKLYDIRSMKELESFRGHNKDVTALAWHPFHEE 189
Query: 241 LF-SGFDDNLKVYSW-----EPVI----CHD-SV-DMGWSTLGDLCINDGKLLGCSFY-R 287
F SG D ++ W P I HD SV D+ W +G L + G F+ R
Sbjct: 190 YFVSGSYDGA-IFHWLVGHETPQIEINNAHDNSVWDLAWHPVGYLLCSGGNDHATRFWCR 248
Query: 288 NSVGIWVAD-VSHVEPYGVGAPEP 310
N G D + + G G P
Sbjct: 249 NRPGDLTRDKYNSGQMQGYGDQHP 272
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 245 (91.3 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 66/235 (28%), Positives = 109/235 (46%)
Query: 6 YK-LQEFVAHSANVNCISIGKKACR----FLITGGDDQKVNLWAIGKPT--------ALM 52
YK + F H+A+V +++G FL + D+ + + +G A+
Sbjct: 400 YKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVW 459
Query: 53 SLCGLSSPVDSVAFDSAEVLVLAGASTG-VIKLWDLEESKMVRTLTGHKSNCTAVEFHPF 111
++ V+++ S + ++A AS IKLWD ++V L GH+ A F+PF
Sbjct: 460 TIKAHDRDVNAIQV-SKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPF 518
Query: 112 GEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDL 171
ASG D ++IW++ + C+ T +GHT I + + G VVS D +VKVW L
Sbjct: 519 SRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSL 578
Query: 172 TAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEV 226
++G+ + HE + ++ LL +G AD V W T E I E+
Sbjct: 579 SSGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWKDVTEEYIAKQAEEL 633
Score = 215 (80.7 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 49/200 (24%), Positives = 102/200 (51%)
Query: 61 VDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
V ++A S ++A + ++ ++++ + ++++ H++ + P A+G
Sbjct: 64 VTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGA 123
Query: 121 DTNLKIWDIRKKGCIHTYKGHTRGINTIRFTP-DGRWVV-SGGFDNVVKVWDLTAGKLLH 178
+ +K+WDI H+++GH I+ + F WV+ SG D+ V++WDL + + +
Sbjct: 124 EGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMA 183
Query: 179 DFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITF---H 235
F+ H IR + F P L +GS D+TV+ W+++ + T P V AI +
Sbjct: 184 VFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAV-RTIPVFHSVEAIGWVNGQ 242
Query: 236 PDGRTLFSGFDDNLKVYSWE 255
P+ + L++ + NL + +W+
Sbjct: 243 PEEKILYTAGEGNL-ILAWD 261
Score = 192 (72.6 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 45/186 (24%), Positives = 86/186 (46%)
Query: 31 LITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES 90
LI + + ++ I + S+ +PV ++ D L+ G + G++K+WD+ +
Sbjct: 76 LIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGA 135
Query: 91 KMVRTLTGHKSNCTAVEF--HPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTI 148
+ + GH +A+ F H ASG D+ +++WD+ + ++GH+ I +
Sbjct: 136 YVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGL 195
Query: 149 RFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK-FHEGH-IRSIDFHPLEFLLATGSADR 206
F P G +++SG D V+VW++ + FH I ++ P E +L T
Sbjct: 196 TFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNGQPEEKILYTAGEGN 255
Query: 207 TVKFWD 212
+ WD
Sbjct: 256 LILAWD 261
Score = 191 (72.3 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 48/177 (27%), Positives = 80/177 (45%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G +++ AH V ++I L TGG + V +W I S G + ++
Sbjct: 93 GRRIKSMKAHETPVITMTIDPTNT-LLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISAL 151
Query: 65 AFDSAE-VLVLA-GASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDT 122
F + VLA GA ++LWDL S+ + GH S + F P G F SG D
Sbjct: 152 CFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDK 211
Query: 123 NLKIWDIRKKGCIHTYKG-HT-RGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLL 177
+++W+I+K+ + T H+ I + P+ + + + G N++ WD +G L
Sbjct: 212 TVQVWNIKKRSAVRTIPVFHSVEAIGWVNGQPEEKILYTAGEGNLILAWDWKSGSRL 268
Score = 182 (69.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 43/168 (25%), Positives = 74/168 (44%)
Query: 90 SKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIR 149
++ V T+ H + A++ G AS D +K+WD + +GH RG+
Sbjct: 455 NRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACS 514
Query: 150 FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
F P R + SG D +++W++ + + + H G I + + + + +AD VK
Sbjct: 515 FNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVK 574
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPV 257
W L + E + + V A+ DG L SG D + V W+ V
Sbjct: 575 VWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAV-VSVWKDV 621
Score = 47 (21.6 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 32 ITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESK 91
+ G D+ ++ IG +++C + +D ++ D +V + T ++ D E
Sbjct: 319 LNGSFDEVIDCAWIGDDH--LAVCSNTEFIDVISTDGTQVFGVLEGHTDIVLTLDSSEDG 376
Query: 92 MVRTLTGHKSN 102
V TG K N
Sbjct: 377 -VWLATGAKDN 386
Score = 38 (18.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 30 FLITGGDDQKVNLW 43
+L TG D V LW
Sbjct: 378 WLATGAKDNTVRLW 391
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 248 (92.4 bits), Expect = 8.1e-17, P = 8.1e-17
Identities = 81/315 (25%), Positives = 143/315 (45%)
Query: 8 LQEFV-AHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAF 66
LQ+ + HS + ++ + R L+TG D V LW + G + V SVA
Sbjct: 766 LQKILKGHSHECSTMAFSSDS-RQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAI 824
Query: 67 DSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKI 126
S +++G S +KLWD +++TL + +V F P A+G D + I
Sbjct: 825 SSDGRQIVSG-SIEAVKLWDAATGDLLKTLASGFAG--SVAFSPDSRQIAAGFKDGKIFI 881
Query: 127 WDIRKKGCIH-TYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEG 185
WD G + T + H I +I F+PD + +V+ D+ +K WD+T G + + H
Sbjct: 882 WDAA--GTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGGV-QEAVGHSK 938
Query: 186 HIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF 245
H+ ++ P ++A+GSAD+T+K WD T +L + + V + F D R + S
Sbjct: 939 HVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCS 998
Query: 246 DDNLKVYSWEPVICHDSVDMGWSTLGDLCIN-DGKLLGCSFYRNSVGIW-VADVSHVEPY 303
+ +K++ +S + + ++ DGK + + +W +A S ++
Sbjct: 999 SEAVKIWDAATGKVQNSFESD-DVFTIVAVSPDGKHIASGHCNGRIKLWDMATGSLLKTM 1057
Query: 304 GVGAPEPDQSICTEV 318
+ D + TEV
Sbjct: 1058 AGYRSKFDSLVTTEV 1072
Score = 217 (81.4 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 73/279 (26%), Positives = 123/279 (44%)
Query: 54 LCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGE 113
L G S ++AF S ++ G+ ++LW+ + +T GH +V G
Sbjct: 770 LKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGR 829
Query: 114 FFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTA 173
SG ++ +K+WD + T G ++ F+PD R + +G D + +WD A
Sbjct: 830 QIVSGSIEA-VKLWDAATGDLLKTLASGFAG--SVAFSPDSRQIAAGFKDGKIFIWD-AA 885
Query: 174 GKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLE---TFELIGSTRPEVTGVH 230
G L + H G I SI F P L T S D T+K WD+ E +G ++ VT
Sbjct: 886 GTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQEAVGHSK-HVT--- 941
Query: 231 AITFHPDGRTLFSGF-DDNLKVYSWEPVICHDSVDMGWSTLGDLC--INDGKLLGCSFYR 287
+ PDG+ + SG D +K++ ++ T+ + +++ +++ CS
Sbjct: 942 TMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCS--S 999
Query: 288 NSVGIWVADVSHVEPYGVGAPEPDQSICTEVKFNPPGSH 326
+V IW A V+ + E D + T V +P G H
Sbjct: 1000 EAVKIWDAATGKVQ----NSFESDD-VFTIVAVSPDGKH 1033
Score = 214 (80.4 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 70/290 (24%), Positives = 124/290 (42%)
Query: 82 IKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGH 141
I L+D + + L GH C+ + F +G +D +++W+ T+ GH
Sbjct: 756 IMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGH 815
Query: 142 TRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLAT 201
T + ++ + DGR +VSG + VK+WD G LL G S+ F P +A
Sbjct: 816 TGTVLSVAISSDGRQIVSGSIE-AVKLWDAATGDLLKTLA--SGFAGSVAFSPDSRQIAA 872
Query: 202 GSADRTVKFWDLE-TFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDNLKVYSWEPVICH 260
G D + WD T + P + +I F PD + L + D+ + W+ I
Sbjct: 873 GFKDGKIFIWDAAGTLQKTLERHPGA--IMSIAFSPDVKQLVTCSTDST-IKRWDITIGG 929
Query: 261 DSVDMGWST-LGDLCIN-DGKLLGCSFYRNSVGIWVADVSHVEPYGVGAPEPDQSICTEV 318
+G S + + ++ DGK++ ++ +W A ++ G + + + +
Sbjct: 930 VQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSL 989
Query: 319 KFNPPGSHSLEKVGIIGRSTSGFRSTSPDYETKDIKTIYVDSTGGKPVAS 368
S S E V I +T +++ +E+ D+ TI S GK +AS
Sbjct: 990 DNRQIVSCSSEAVKIWDAATGKVQNS---FESDDVFTIVAVSPDGKHIAS 1036
Score = 131 (51.2 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 37/123 (30%), Positives = 56/123 (45%)
Query: 68 SAEVLVLAGASTGVIKLW-----DLEES--KMVRTLTGHKSNCTAVEFHPFGEFFASGCM 120
S E V+ G + + +W +E+S M++TLTGH V F P G+ ASG
Sbjct: 581 SPESSVVKGENLHKVPVWLGRAPPMEDSWTPMIQTLTGHSEAVWRVAFSPDGKQIASGSD 640
Query: 121 DTNLKIWDIRKKGCIHTYKG-HTRG--------INTIRFTPDGRWVVSGGFDNVVKVWDL 171
+K+WD T G H + + + F PD + ++SG +D V +WD
Sbjct: 641 SGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQEQVKAMAFLPDSKLIISGYYDGSVMLWDT 700
Query: 172 TAG 174
T G
Sbjct: 701 TTG 703
Score = 59 (25.8 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 162 FDNVV--KVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFEL 218
FD++V +V+D+ L + F+ I + F P L+ + S DR +K WD T +L
Sbjct: 1064 FDSLVTTEVFDIQ----LQEAIFNT-QITGLVFSPDAKLILSTSTDRAIKLWDAATGDL 1117
>SGD|S000003105 [details] [associations]
symbol:SEC27 "Essential beta'-coat protein of the COPI
coatomer" species:4932 "Saccharomyces cerevisiae" [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IMP;IPI] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0030126 "COPI vesicle coat" evidence=IGI;ISS] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IMP] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000003105 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:BK006941
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 GO:GO:0043130
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG OrthoDB:EOG48H0BF
GO:GO:0032511 EMBL:U11237 EMBL:X92670 EMBL:Z72659 PIR:B55123
RefSeq:NP_011378.1 PDB:2YNN PDB:2YNO PDB:2YNP PDBsum:2YNN
PDBsum:2YNO PDBsum:2YNP ProteinModelPortal:P41811 SMR:P41811
DIP:DIP-6468N IntAct:P41811 MINT:MINT-428887 STRING:P41811
PaxDb:P41811 PeptideAtlas:P41811 EnsemblFungi:YGL137W GeneID:852740
KEGG:sce:YGL137W CYGD:YGL137w NextBio:972153 Genevestigator:P41811
GermOnline:YGL137W Uniprot:P41811
Length = 889
Score = 259 (96.2 bits), Expect = 8.7e-17, Sum P(2) = 8.7e-17
Identities = 69/261 (26%), Positives = 122/261 (46%)
Query: 21 ISIGKKACR--FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGAS 78
+ GK R ++I G DD ++ ++ ++ + S+A + VL+G+
Sbjct: 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSD 117
Query: 79 TGVIKLWDLEES-KMVRTLTGHKSNCTAVEFHPFG-EFFASGCMDTNLKIWDIRKKGCIH 136
+KLW+ E + + +T GH+ V F+P FASGC+D +K+W + +
Sbjct: 118 DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF 177
Query: 137 TYK-GHTRGINTIRF--TPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFH 193
T G RG+N + + PD ++++ D +K+WD + + H ++ FH
Sbjct: 178 TLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFH 237
Query: 194 PLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLF--SGFDDNLKV 251
P ++ +GS D T+K W+ T+++ + + I HP GR + SGFD+ V
Sbjct: 238 PTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTV 297
Query: 252 YSW---EPVICHDSVD-MGWS 268
S EP + D V + WS
Sbjct: 298 LSLGNDEPTLSLDPVGKLVWS 318
Score = 213 (80.0 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 56/223 (25%), Positives = 100/223 (44%)
Query: 39 KVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTG 98
+V LW + S+ +PV + F + + ++ G+ I++++ + V
Sbjct: 36 RVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA 95
Query: 99 HKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIH-TYKGHTRGINTIRFTP-DGRW 156
H ++ HP + SG D +K+W+ + T++GH + + F P D
Sbjct: 96 HPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST 155
Query: 157 VVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSI---DFHPL--EFLLATGSADRTVKFW 211
SG D VKVW L G+ +F G R + D++PL + + T S D T+K W
Sbjct: 156 FASGCLDRTVKVWSL--GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIW 213
Query: 212 DLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN-LKVYS 253
D +T + + ++ V FHP + SG +D LK+++
Sbjct: 214 DYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWN 256
Score = 168 (64.2 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 51/208 (24%), Positives = 95/208 (45%)
Query: 58 SSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFAS 117
S V + F E VL +G ++LW+ E VR++ ++ A +F +
Sbjct: 13 SDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIV 72
Query: 118 GCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLL 177
G D +++++ + ++ H I +I P +V+SG D VK+W+ L
Sbjct: 73 GSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWAL 132
Query: 178 HD-FKFHEGHIRSIDFHPLE-FLLATGSADRTVKFWDL-ETFELIGSTRPEVTGVHAITF 234
F+ HE + + F+P + A+G DRTVK W L ++ T + GV+ + +
Sbjct: 133 EQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDY 192
Query: 235 HP--DGRTLFSGFDD-NLKVYSWEPVIC 259
+P D + + DD +K++ ++ C
Sbjct: 193 YPLPDKPYMITASDDLTIKIWDYQTKSC 220
Score = 158 (60.7 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 40/163 (24%), Positives = 75/163 (46%)
Query: 94 RTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPD 153
+T + ++FHP + + +++W+ + + + + + +F
Sbjct: 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIAR 66
Query: 154 GRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDL 213
W++ G D ++V++ G+ + DF+ H +IRSI HP + + +GS D TVK W+
Sbjct: 67 KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW 126
Query: 214 ETFELIGST-RPEVTGVHAITFHP-DGRTLFSG-FDDNLKVYS 253
E + T V + F+P D T SG D +KV+S
Sbjct: 127 ENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWS 169
Score = 152 (58.6 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 48/167 (28%), Positives = 69/167 (41%)
Query: 9 QEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLC-GLSSPVDSVAFD 67
Q F H V C++ K +G D+ V +W++G+ T +L G V+ V +
Sbjct: 134 QTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYY 193
Query: 68 SA--EVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLK 125
+ ++ + IK+WD + V TL GH SN + FHP SG D LK
Sbjct: 194 PLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLK 253
Query: 126 IWDIRKKGCIHTYKGHTRGINTIRFTPDGRW-VVSGGFDNVVKVWDL 171
IW+ T I P GR ++ GFDN V L
Sbjct: 254 IWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSL 300
Score = 38 (18.4 bits), Expect = 8.7e-17, Sum P(2) = 8.7e-17
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 257 VICHDSVDMGWSTLGD 272
++ +S +M W LGD
Sbjct: 674 LLTDESAEMKWRALGD 689
>ASPGD|ASPL0000006005 [details] [associations]
symbol:AN5972 species:162425 "Emericella nidulans"
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0032511 "late endosome to vacuole
transport via multivesicular body sorting pathway" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011044 SUPFAM:SSF50969 HOGENOM:HOG000163444
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
ProteinModelPortal:C8V3C4 EnsemblFungi:CADANIAT00007048
Uniprot:C8V3C4
Length = 853
Score = 245 (91.3 bits), Expect = 9.1e-17, P = 9.1e-17
Identities = 64/248 (25%), Positives = 113/248 (45%)
Query: 30 FLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEE 89
+++ G DD ++ ++ + S + S+A + VL + IKLWD E+
Sbjct: 69 WIVCGSDDFQLRIYNYNTSEKIASFEAHPDYIRSIAVHPTQPFVLTASDDMTIKLWDWEK 128
Query: 90 S-KMVRTLTGHKSNCTAVEFHPFG-EFFASGCMDTNLKIWDIRKKGCIHTYKGH-TRGIN 146
K V+ GH + +P FAS C+D +KIW + T + H T+G+N
Sbjct: 129 GWKCVQVYEGHSHYVMGLAINPKDTNTFASACLDRTVKIWSLGSPHANFTLEAHETKGVN 188
Query: 147 TIRFTP--DGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSA 204
+ + P D ++++ D VKVWD T L+ + H ++ +HP ++ +GS
Sbjct: 189 HVDYYPQADKPYLLTTSDDKTVKVWDYTTKALIATLEGHTSNVSFACYHPELPVIISGSE 248
Query: 205 DRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN---LKVYSWEPVICHD 261
D T+K W T+ L S + +++ + + GFDD +K+ EP + D
Sbjct: 249 DGTIKIWHANTYRLEQSLSYGLERAWCVSYQRGKQGVALGFDDGAVVVKMGREEPAVSMD 308
Query: 262 -SVDMGWS 268
S + W+
Sbjct: 309 GSGKIVWA 316
Score = 210 (79.0 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 52/220 (23%), Positives = 99/220 (45%)
Query: 40 VNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGH 99
V +W+ + + + PV + F + + ++ G+ +++++ S+ + + H
Sbjct: 37 VYIWSYETQSIIKTFELTDVPVRAGRFIARKNWIVCGSDDFQLRIYNYNTSEKIASFEAH 96
Query: 100 KSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKG-CIHTYKGHTRGINTIRFTP-DGRWV 157
++ HP F + D +K+WD K C+ Y+GH+ + + P D
Sbjct: 97 PDYIRSIAVHPTQPFVLTASDDMTIKLWDWEKGWKCVQVYEGHSHYVMGLAINPKDTNTF 156
Query: 158 VSGGFDNVVKVWDLTAGKLLHDFKFHEGH-IRSIDFHPLE---FLLATGSADRTVKFWDL 213
S D VK+W L + + HE + +D++P +LL T S D+TVK WD
Sbjct: 157 ASACLDRTVKIWSLGSPHANFTLEAHETKGVNHVDYYPQADKPYLLTT-SDDKTVKVWDY 215
Query: 214 ETFELIGSTRPEVTGVHAITFHPDGRTLFSGFDDN-LKVY 252
T LI + + V +HP+ + SG +D +K++
Sbjct: 216 TTKALIATLEGHTSNVSFACYHPELPVIISGSEDGTIKIW 255
Score = 152 (58.6 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 39/163 (23%), Positives = 70/163 (42%)
Query: 94 RTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPD 153
R L ++FHP + + ++ IW + I T++ + RF
Sbjct: 7 RQLFARSERVKGIDFHPTEPWILTTLYSGHVYIWSYETQSIIKTFELTDVPVRAGRFIAR 66
Query: 154 GRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDL 213
W+V G D +++++ + + F+ H +IRSI HP + + T S D T+K WD
Sbjct: 67 KNWIVCGSDDFQLRIYNYNTSEKIASFEAHPDYIRSIAVHPTQPFVLTASDDMTIKLWDW 126
Query: 214 ET-FELIGSTRPEVTGVHAITFHP-DGRTLFSG-FDDNLKVYS 253
E ++ + V + +P D T S D +K++S
Sbjct: 127 EKGWKCVQVYEGHSHYVMGLAINPKDTNTFASACLDRTVKIWS 169
Score = 148 (57.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 47/203 (23%), Positives = 87/203 (42%)
Query: 58 SSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFAS 117
S V + F E +L +G + +W E +++T A F +
Sbjct: 13 SERVKGIDFHPTEPWILTTLYSGHVYIWSYETQSIIKTFELTDVPVRAGRFIARKNWIVC 72
Query: 118 GCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAG-KL 176
G D L+I++ I +++ H I +I P +V++ D +K+WD G K
Sbjct: 73 GSDDFQLRIYNYNTSEKIASFEAHPDYIRSIAVHPTQPFVLTASDDMTIKLWDWEKGWKC 132
Query: 177 LHDFKFHEGHIRSIDFHPLEF-LLATGSADRTVKFWDLETFELIGSTRP-EVTGVHAITF 234
+ ++ H ++ + +P + A+ DRTVK W L + + E GV+ + +
Sbjct: 133 VQVYEGHSHYVMGLAINPKDTNTFASACLDRTVKIWSLGSPHANFTLEAHETKGVNHVDY 192
Query: 235 HP--DGRTLFSGFDDN-LKVYSW 254
+P D L + DD +KV+ +
Sbjct: 193 YPQADKPYLLTTSDDKTVKVWDY 215
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 245 (91.3 bits), Expect = 9.9e-17, P = 9.9e-17
Identities = 58/221 (26%), Positives = 106/221 (47%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTA---LMSLCGLSSP------VDSV 64
HS V I+ + +F+++G D V +W + + T +M + S+ V+SV
Sbjct: 431 HSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSV 490
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNL 124
+ L+ +G+ KLW L + +++ GH+ +V+F P + S D ++
Sbjct: 491 CVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSV 550
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
+IW I+ C+ T++GH + I F G +VS G D +VK+W + + + H+
Sbjct: 551 RIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNECVRTLDAHQ 610
Query: 185 GHIRSIDFHPLEFLLATGSADRTVKFWD--LETFELIGSTR 223
+ ++ + L+ TGSAD T+ W L +I ST+
Sbjct: 611 DKVWALHGGCRDELMVTGSADSTITVWTDKLRKTVIIKSTK 651
Score = 205 (77.2 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 49/151 (32%), Positives = 72/151 (47%)
Query: 58 SSPVDSVAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFG---EF 114
S PV S++FD L+ G G IKLWD+ + L G VEFHP +
Sbjct: 106 SVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQL 165
Query: 115 FASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAG 174
F+S D ++IWD+R C+ + H + + F+PDG +VS G D + VWDL
Sbjct: 166 FSSSS-DCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQ 224
Query: 175 KLLHDFKFHEGHIRSIDFHPLEFLLATGSAD 205
K+ +E + + +L +GSAD
Sbjct: 225 KVKRTIPVYEA-VEGV-------VLLSGSAD 247
Score = 177 (67.4 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 60/273 (21%), Positives = 122/273 (44%)
Query: 9 QEFVAHSANVNCIS-IGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV-AF 66
Q+FV ++ +V + +GK + Q + ++ + + + L G + + S+ F
Sbjct: 338 QQFVGYNDDVLDVKFVGKDDTHIAVATNSSQ-LKVFELSTNSCQI-LHGHTDTILSIDVF 395
Query: 67 DSAEVLVLAGASTGVIKLWDLEESK----MVRTLTGHKSNCTAVEFHPFGE-FFASGCMD 121
+ V ++W ++ S V TGH + ++ + F SG D
Sbjct: 396 RKGSMFATCAKDKSV-RVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQD 454
Query: 122 TNLKIWDIRK----KGCI-----HTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLT 172
+K+WD+ + +G + T + H + +N++ +P+ + + SG D K+W L+
Sbjct: 455 CTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALS 514
Query: 173 AGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAI 232
+LL + H + S+ F P++ +L + SAD +V+ W ++ F + + V I
Sbjct: 515 DLRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKI 574
Query: 233 TFHPDGRTLFSGFDDNL-KVYSWEPVICHDSVD 264
F G L S D L K+++ + C ++D
Sbjct: 575 IFVSRGTQLVSSGSDGLVKLWTIKTNECVRTLD 607
Score = 166 (63.5 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 47/199 (23%), Positives = 88/199 (44%)
Query: 39 KVNLWAIGKPTALMSLCGLSSPVDSVAFD-SAEVLVLAGASTGVI-KLWDLEESKMVRTL 96
K+N+ I + S+ D AF S + +L AS ++ + WD ++ + R+
Sbjct: 43 KINILQISTGKIIHSI-EQEDQEDITAFALSPDDEMLVSASRALLLRQWDWKQQQCRRSW 101
Query: 97 TG-HKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPD-G 154
H ++ F A+G D +K+WD+ K+ C H KG + ++ + F PD
Sbjct: 102 RAVHSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDIS 161
Query: 155 RW-VVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDL 213
R + S D +++WDL + + + + H + ++ F P L + D+ WDL
Sbjct: 162 RLQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDL 221
Query: 214 ETFELIGSTRPEVTGVHAI 232
+ + + T P V +
Sbjct: 222 QE-QKVKRTIPVYEAVEGV 239
Score = 153 (58.9 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 49/176 (27%), Positives = 78/176 (44%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAF--DSAEV 71
HS V +S + L TGG D + LW + K +L G S V V F D + +
Sbjct: 105 HSVPVASMSFDCTST-LLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRL 163
Query: 72 LVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRK 131
+ + +S I++WDL S+ V L H S TA+ F P G S D +WD+++
Sbjct: 164 QLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQE 223
Query: 132 ---KGCIHTYKGHTRGI---------NTIRFTPDGRWVVSGGFDNVVKVWDLTAGK 175
K I Y+ G+ + + D +V+ G V++VWD ++ +
Sbjct: 224 QKVKRTIPVYEA-VEGVVLLSGSADYSEMGVKSDALHLVTAGSKGVLRVWDSSSSR 278
>UNIPROTKB|F1NLV4 [details] [associations]
symbol:GNB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001750 "photoreceptor outer segment" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0005834 GeneTree:ENSGT00550000074331
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:AADN02040871
IPI:IPI00596111 Ensembl:ENSGALT00000002040
Ensembl:ENSGALT00000040376 Uniprot:F1NLV4
Length = 403
Score = 237 (88.5 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 67/246 (27%), Positives = 109/246 (44%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H A + + G + R L++ D K+ +W + ++ SS V + A+ + V
Sbjct: 54 HLAKIYAMHWGTDS-RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 74 LAGASTGVIKLWDLEES----KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI 129
G + +++L+ ++ R L GH + F + S DT +WDI
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDI 171
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
T+ GHT + ++ PD R VSG D K+WD+ G F HE I +
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPDARCFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFE--LIGSTRPEVTGVHAITFHPDGRTLFSGFDD 247
I F P ATGS D T + +DL + ++ S + G+ ++ F GR L +G+DD
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDD 291
Query: 248 -NLKVY 252
N V+
Sbjct: 292 FNCNVW 297
Score = 198 (74.8 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 53/191 (27%), Positives = 85/191 (44%)
Query: 30 FLITGGDDQKVNLWAI----GKPTALMSLCGLSSPVDSVAF-DSAEVLVLAGASTGVIKL 84
++ GG D +++ + G L G + + F D +++ +G +T L
Sbjct: 111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT--CAL 168
Query: 85 WDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRG 144
WD+E + T TGH + ++ P F SG D + K+WD+R+ C T+ GH
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDARCFVSGACDASAKLWDVREGMCRQTFTGHESD 228
Query: 145 INTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEG---HIRSIDFHPLEFLLAT 201
IN I F P+G +G D +++DL A + L + H+ I S+ F LL
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMVYS-HDNIICGITSVAFSKSGRLLLA 287
Query: 202 GSADRTVKFWD 212
G D WD
Sbjct: 288 GYDDFNCNVWD 298
Score = 187 (70.9 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 54/208 (25%), Positives = 91/208 (43%)
Query: 72 LVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIR- 130
L+++ + G + +WD + V + S + P G + A G +D I++++
Sbjct: 69 LLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT 128
Query: 131 KKGCIHTYK---GHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHI 187
++G + + GHT ++ RF D + V S G D +WD+ G+ F H G +
Sbjct: 129 REGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHTGDV 187
Query: 188 RSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTG----VHAITFHPDGRTLFS 243
S+ P +G+ D + K WD+ G R TG ++AI F P+G +
Sbjct: 188 MSLSLAPDARCFVSGACDASAKLWDVRE----GMCRQTFTGHESDINAICFFPNGNAFAT 243
Query: 244 GFDD------------NLKVYSWEPVIC 259
G DD L VYS + +IC
Sbjct: 244 GSDDATCRLFDLRADQELMVYSHDNIIC 271
Score = 165 (63.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 45/186 (24%), Positives = 77/186 (41%)
Query: 94 RTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPD 153
RTL GH + A+ + S D L IWD +H + + T + P
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 154 GRWVVSGGFDNVVKVWDLTA--G--KLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
G +V GG DN+ +++L G ++ + H G++ F + + T S D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSSGDTTCA 167
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSWEPVICHDSVDMGWS 268
WD+ET + + V +++ PD R SG D + K++ +C + S
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDARCFVSGACDASAKLWDVREGMCRQTFTGHES 227
Query: 269 TLGDLC 274
+ +C
Sbjct: 228 DINAIC 233
Score = 130 (50.8 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 34/152 (22%), Positives = 60/152 (39%)
Query: 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSV 64
G + F H+ +V +S+ A R ++G D LW + + + G S ++++
Sbjct: 174 GQQTTTFTGHTGDVMSLSLAPDA-RCFVSGACDASAKLWDVREGMCRQTFTGHESDINAI 232
Query: 65 AFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNC--TAVEFHPFGEFFASGCMDT 122
F G+ +L+DL + + + C T+V F G +G D
Sbjct: 233 CFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDF 292
Query: 123 NLKIWDIRKKGCIHTYKGHTRGINTIRFTPDG 154
N +WD K GH ++ + T DG
Sbjct: 293 NCNVWDTLKADRAGVLAGHDNRVSCLGVTDDG 324
>UNIPROTKB|Q9HAV0 [details] [associations]
symbol:GNB4 "Guanine nucleotide-binding protein subunit
beta-4" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006112 GO:GO:0004871
GO:GO:0071377 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 EMBL:AF300648 EMBL:AK001890
EMBL:BC000873 IPI:IPI00012451 RefSeq:NP_067642.1 UniGene:Hs.173030
ProteinModelPortal:Q9HAV0 SMR:Q9HAV0 IntAct:Q9HAV0
MINT:MINT-1135986 STRING:Q9HAV0 PhosphoSite:Q9HAV0 DMDM:22256759
OGP:Q9HAV0 PeptideAtlas:Q9HAV0 PRIDE:Q9HAV0 DNASU:59345
Ensembl:ENST00000232564 Ensembl:ENST00000468623 GeneID:59345
KEGG:hsa:59345 UCSC:uc003fjv.4 CTD:59345 GeneCards:GC03M179113
HGNC:HGNC:20731 HPA:CAB018383 HPA:CAB018737 MIM:610863
neXtProt:NX_Q9HAV0 PharmGKB:PA134864200 InParanoid:Q9HAV0 KO:K04538
OMA:GACDATS PhylomeDB:Q9HAV0 GenomeRNAi:59345 NextBio:65246
ArrayExpress:Q9HAV0 Bgee:Q9HAV0 CleanEx:HS_GNB4
Genevestigator:Q9HAV0 GermOnline:ENSG00000114450 Uniprot:Q9HAV0
Length = 340
Score = 232 (86.7 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 65/246 (26%), Positives = 110/246 (44%)
Query: 14 HSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLV 73
H A + + G + R L++ D K+ +W + ++ SS V + A+ + V
Sbjct: 54 HLAKIYAMHWGYDS-RLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYV 112
Query: 74 LAGASTGVIKLWDLEES----KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDI 129
G + +++L+ ++ R L GH + F + S DT +WDI
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSG-DTTCALWDI 171
Query: 130 RKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRS 189
T+ GH+ + ++ +PD R VSG D K+WD+ G F H I +
Sbjct: 172 ETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINA 231
Query: 190 IDFHPLEFLLATGSADRTVKFWDLETFE--LIGSTRPEVTGVHAITFHPDGRTLFSGFDD 247
+ F P + ATGS D T + +DL + L+ S + G+ ++ F GR L +G+DD
Sbjct: 232 VSFFPNGYAFATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDD 291
Query: 248 -NLKVY 252
N V+
Sbjct: 292 FNCNVW 297
Score = 200 (75.5 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 52/191 (27%), Positives = 87/191 (45%)
Query: 67 DSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKI 126
D ++++ +G +T LWD+E ++ T TGH + ++ P F SG D + K+
Sbjct: 153 DDSQIVTSSGDTT--CALWDIETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKL 210
Query: 127 WDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEG- 185
WDIR C ++ GH IN + F P+G +G D +++DL A + L + H+
Sbjct: 211 WDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDLRADQELLLYS-HDNI 269
Query: 186 --HIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFS 243
I S+ F LL G D WD + G V + DG + +
Sbjct: 270 ICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAGVLAGHDNRVSCLGVTDDGMAVAT 329
Query: 244 G-FDDNLKVYS 253
G +D L++++
Sbjct: 330 GSWDSFLRIWN 340
Score = 199 (75.1 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 55/211 (26%), Positives = 94/211 (44%)
Query: 9 QEFVAHSANVNCISIGKKACRFL-----ITGGDDQKVNLWAIGKPTALMSLCGLSSPVDS 63
+E H+ ++C CRFL +T D LW I + G S V S
Sbjct: 137 RELPGHTGYLSC-------CRFLDDSQIVTSSGDTTCALWDIETAQQTTTFTGHSGDVMS 189
Query: 64 VAFDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTN 123
++ ++GA KLWD+ + ++ TGH S+ AV F P G FA+G D
Sbjct: 190 LSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDAT 249
Query: 124 LKIWDIR--KKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
+++D+R ++ ++++ GI ++ F+ GR +++G D VWD G
Sbjct: 250 CRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAGVLA 309
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWD 212
H+ + + +ATGS D ++ W+
Sbjct: 310 GHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 185 (70.2 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 58/263 (22%), Positives = 114/263 (43%)
Query: 66 FDSAEVLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLK 125
+DS L+++ + G + +WD + + + S + P G + A G +D
Sbjct: 65 YDSR--LLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICS 122
Query: 126 IWDIR-KKGCIHTYK---GHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK 181
I++++ ++G + + GHT ++ RF D + V S G D +WD+ + F
Sbjct: 123 IYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSG-DTTCALWDIETAQQTTTFT 181
Query: 182 FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTL 241
H G + S+ P +G+ D + K WD+ S V+ ++A++F P+G
Sbjct: 182 GHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAF 241
Query: 242 FSGFDD-NLKVYSWEP-----VICHDSVDMGWSTLGDLCINDGKLLGCSFYRNSVGIWVA 295
+G DD +++ + HD++ G +++ G+LL + + +W
Sbjct: 242 ATGSDDATCRLFDLRADQELLLYSHDNIICGITSVA--FSKSGRLLLAGYDDFNCNVW-- 297
Query: 296 DVSHVEPYGVGAPEPDQSICTEV 318
D + GV A ++ C V
Sbjct: 298 DTLKGDRAGVLAGHDNRVSCLGV 320
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/174 (25%), Positives = 74/174 (42%)
Query: 94 RTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPD 153
RTL GH + A+ + S D L IWD +H + + T + P
Sbjct: 49 RTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPS 108
Query: 154 GRWVVSGGFDNVVKVWDLTA--G--KLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK 209
G +V GG DN+ +++L G ++ + H G++ F + + T S D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLD-DSQIVTSSGDTTCA 167
Query: 210 FWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSWEPVICHDS 262
WD+ET + + V +++ PD RT SG D + K++ +C S
Sbjct: 168 LWDIETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQS 221
>UNIPROTKB|I3L988 [details] [associations]
symbol:AAMP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0014909 "smooth muscle cell migration" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009986 Gene3D:2.130.10.10
SUPFAM:SSF50978 GeneTree:ENSGT00690000102167 GO:GO:0014909
Ensembl:ENSSSCT00000031355 OMA:FAGHEAS Uniprot:I3L988
Length = 411
Score = 236 (88.1 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 61/224 (27%), Positives = 97/224 (43%)
Query: 11 FVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAE 70
F HSA+V C+S+ K +TGG+D K +W + L G V F
Sbjct: 79 FALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDS 138
Query: 71 VLVLAGASTGVIKLWDLEESKMVRTLTGHKSNCTAVEFH--PFGE----FFASGCMDTNL 124
LV G +G++K+W ++ + V + + E+ P+G +G D N
Sbjct: 139 TLVATGDMSGLLKVWQVDTKEEVWSFEAGDLEVRSSEWDSAPWGRGRGPVXLAGTADGNT 198
Query: 125 KIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHE 184
+W + C T++G R PDG+ V G D +++WDL G ++ K E
Sbjct: 199 WMWKVPNGDC-KTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGNAIYVLKGTE 257
Query: 185 GH---IRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPE 225
GH + + + L+ TGS D K T +++G RPE
Sbjct: 258 GHQGPLTCVATNQDGSLILTGSVDCQAKLVSATTGKVVGVFRPE 301
WARNING: HSPs involving 1541 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.129 0.374 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1074 1057 0.00083 123 3 11 23 0.45 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1791
No. of states in DFA: 622 (66 KB)
Total size of DFA: 473 KB (2221 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 123.11u 0.13s 123.24t Elapsed: 00:00:05
Total cpu time: 123.23u 0.13s 123.36t Elapsed: 00:00:05
Start: Mon May 20 15:08:04 2013 End: Mon May 20 15:08:09 2013
WARNINGS ISSUED: 2