Query 001462
Match_columns 1074
No_of_seqs 851 out of 3492
Neff 6.0
Searched_HMMs 29240
Date Tue Mar 26 15:50:14 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001462.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_765-768//hhsearch_pdb/001462hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 1.0 1 1 338.1 47.8 326 12-354 15-359 (611)
2 1vyh_C Platelet-activating fac 1.0 1 1 331.1 42.1 287 8-295 101-409 (410)
3 1nr0_A Actin interacting prote 1.0 1 1 328.6 47.3 315 3-325 47-380 (611)
4 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 324.3 50.2 288 7-296 607-912 (1249)
5 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 317.5 46.6 339 3-354 645-1038(1249)
6 2ymu_A WD-40 repeat protein; u 1.0 1 1 317.3 54.0 324 6-344 7-371 (577)
7 3dm0_A Maltose-binding peripla 1.0 1 1 315.7 45.7 289 7-296 374-692 (694)
8 3ow8_A WD repeat-containing pr 1.0 1 1 314.7 43.8 294 3-296 20-320 (321)
9 1got_B GT-beta; complex (GTP-b 1.0 1 1 311.1 46.4 288 5-294 45-340 (340)
10 3frx_A Guanine nucleotide-bind 1.0 1 1 310.9 45.2 291 5-297 7-317 (319)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=338.10 Aligned_cols=326 Identities=15% Similarity=0.197 Sum_probs=274.5
Q ss_pred ECCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCC-
Q ss_conf 4479987999991289939999978990999987999337995079989479999389999999986991999986999-
Q 001462 12 VAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES- 90 (1074)
Q Consensus 12 ~gHss~VtsIafSPdg~~lLaTGs~DGtI~IWDi~t~k~l~sl~~hs~~VtsIafSpdg~~LatGs~DG~I~IWDl~sg- 90 (1074)
..+.+.+.+++|+|+| ++|++++ ++.|++|++.++.....+.+|...|++++|+|+|.+|++|+.||.|++||+..+
T Consensus 15 ~~~~g~~~~~~~spdg-~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~ 92 (611)
T 1nr0_A 15 RTARGTAVVLGNTPAG-DKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTT 92 (611)
T ss_dssp CCCTTCCCCCEECTTS-SEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTT
T ss_pred CCCCCCEEEEEECCCC-CEEEECC-CCEEEEECCCCCCCCEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCC
T ss_conf 7406823697667999-9799679-9979994578724273765899865999999999689999489978994898984
Q ss_pred -EEEEEEECCCCCEEEEEECCCCCEEEEEECC----CEEEEEECCCCEEEEEEECCCCCEEEEEECCCCC-EEEEEECCC
Q ss_conf -0699980789983899993799899999789----8099998899907999817998748999968999-999997799
Q 001462 91 -KMVRTLTGHKSNCTAVEFHPFGEFFASGCMD----TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR-WVVSGGFDN 164 (1074)
Q Consensus 91 -k~i~tl~~h~~~VtsIafSPdg~~LaSgs~D----GsI~IWDi~sg~~i~~lk~h~~~VssIafSPdG~-~LvSgs~DG 164 (1074)
.....+..|...|.+++|+|++++|++++.+ +.|++|| .+.....+.+|...|.+++|+|++. .|++++.|+
T Consensus 93 ~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~ 170 (611)
T 1nr0_A 93 HILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDN 170 (611)
T ss_dssp CCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTS
T ss_pred CEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEE--CCCCCCEECCCCCCCEEEEECCCCCEEEEEEECCC
T ss_conf 1566762255784489998999997999989977366999963--89976325478898369998899982999992898
Q ss_pred EEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEC-------CCCCCEEEEEEECC
Q ss_conf 49999989990689963048875899975999699999689939999889970887517-------99888479999169
Q 001462 165 VVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTR-------PEVTGVHAITFHPD 237 (1074)
Q Consensus 165 sI~IWDl~tgk~i~~l~~h~g~ItsLafSPdg~lLaTGs~DGtI~IWDl~tge~i~~l~-------~~~~~ItsIafSPD 237 (1074)
.|++||...++....+.+|...|.+++|+|++.+|++++.|+.|++||+.+++.+..+. .|...|.+++|+|+
T Consensus 171 ~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spd 250 (611)
T 1nr0_A 171 TVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD 250 (611)
T ss_dssp CEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTT
T ss_pred EEEEEECCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCC
T ss_conf 09999799975766520025716999997999989999899919998899982866513664323566787899999799
Q ss_pred CCEEEEEE-CCCEEEEEECCCEEEECCCCCC----CEEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCC
Q ss_conf 98999997-9949999936872320102687----614579945999999998799299999479932453127899999
Q 001462 238 GRTLFSGF-DDNLKVYSWEPVICHDSVDMGW----STLGDLCINDGKLLGCSFYRNSVGIWVADVSHVEPYGVGAPEPDQ 312 (1074)
Q Consensus 238 G~~LasGs-d~~I~Iwdl~s~~~~~~i~~~~----s~~~~l~spDGklLatgs~DGsI~IWDld~~~l~~~~l~~~~~~~ 312 (1074)
|.+|++++ |+.+++|++....+...+..+. ...... .++..+++++.|+.+++|+...+...... .+|.
T Consensus 251 g~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~s~s~d~~i~~~~~~~~~~~~~~----~gh~ 324 (611)
T 1nr0_A 251 GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGII--WTKQALVSISANGFINFVNPELGSIDQVR----YGHN 324 (611)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEE--ECSSCEEEEETTCCEEEEETTTTEEEEEE----CCCS
T ss_pred CCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCEEEEEE--ECCCEEEEEECCCCEEEEECCCCCCCEEE----CCCC
T ss_conf 99999990898099996888701344047887664068999--73887999958996899968899744698----3788
Q ss_pred CCEEEEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCCCEE
Q ss_conf 863199996999921049998961476068963577643069
Q 001462 313 SICTEVKFNPPGSHSLEKVGIIGRSTSGFRSTSPDYETKDIK 354 (1074)
Q Consensus 313 ~~ItsVaFSPDGs~~La~vlavG~stG~lr~ivpD~et~eIv 354 (1074)
..+.+++|+|||. .++.+...|.++.+ |..+++..
T Consensus 325 ~~v~~l~~spdg~-----~l~s~s~D~~v~~W--d~~~~~~~ 359 (611)
T 1nr0_A 325 KAITALSSSADGK-----TLFSADAEGHINSW--DISTGISN 359 (611)
T ss_dssp SCEEEEEECTTSS-----EEEEEETTSCEEEE--ETTTCCEE
T ss_pred CCEEEEEEECCCC-----EEEEEECCCCEEEE--ECCCCCEE
T ss_conf 8889999918999-----89999589849999--78879256
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=1.00 E-value=1 Score=331.07 Aligned_cols=287 Identities=22% Similarity=0.423 Sum_probs=261.8
Q ss_pred EEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEEC
Q ss_conf 79984479987999991289939999978990999987999337995079989479999389999999986991999986
Q 001462 8 LQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDL 87 (1074)
Q Consensus 8 v~~L~gHss~VtsIafSPdg~~lLaTGs~DGtI~IWDi~t~k~l~sl~~hs~~VtsIafSpdg~~LatGs~DG~I~IWDl 87 (1074)
...+.+|.+.|+|++|+|++ .+|++|+.||.|++||+.++.....+.+|...|.+++|++++.+|++|+.||.|++||+
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~-~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF 179 (410)
T ss_dssp SCEEECCSSCEEEEEECSSS-SEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred EEEECCCCCCEEEEEECCCC-CEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEEC
T ss_conf 07661667768999996999-98999938985999989999377888166786878998599999999918981999958
Q ss_pred CCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEE
Q ss_conf 99906999807899838999937998999997898099998899907999817998748999968999999997799499
Q 001462 88 EESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVK 167 (1074)
Q Consensus 88 ~sgk~i~tl~~h~~~VtsIafSPdg~~LaSgs~DGsI~IWDi~sg~~i~~lk~h~~~VssIafSPdG~~LvSgs~DGsI~ 167 (1074)
.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.++.++..+.+|...+.++.|++++.+|++++.|+.|+
T Consensus 180 ~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~ 259 (410)
T 1vyh_C 180 QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259 (410)
T ss_dssp TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCEEE
T ss_conf 99826699828999778999967999999996899699998999948999927886289999989999999991899099
Q ss_pred EEECCCCCEEEEEEECCCCEEEEEECCC--------------------CCEEEEEECCCEEEEEECCCCCEEEEECCCCC
Q ss_conf 9998999068996304887589997599--------------------96999996899399998899708875179988
Q 001462 168 VWDLTAGKLLHDFKFHEGHIRSIDFHPL--------------------EFLLATGSADRTVKFWDLETFELIGSTRPEVT 227 (1074)
Q Consensus 168 IWDl~tgk~i~~l~~h~g~ItsLafSPd--------------------g~lLaTGs~DGtI~IWDl~tge~i~~l~~~~~ 227 (1074)
+||+.++.....+..|...|.+++|+|+ +.+|++|+.|+.|++||+.++.++..+..|..
T Consensus 260 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~ 339 (410)
T 1vyh_C 260 VWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339 (410)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred EEECCCCCEEEEECCCCCEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCC
T ss_conf 99898974366733787458999985865543101212555556678888999993898499998899966999977888
Q ss_pred CEEEEEEECCCCEEEEEEC-CCEEEEEECCCEEEECCCCCCC-EEEEEEECCCCEEEEEECCCEEEEEEC
Q ss_conf 8479999169989999979-9499999368723201026876-145799459999999987992999994
Q 001462 228 GVHAITFHPDGRTLFSGFD-DNLKVYSWEPVICHDSVDMGWS-TLGDLCINDGKLLGCSFYRNSVGIWVA 295 (1074)
Q Consensus 228 ~ItsIafSPDG~~LasGsd-~~I~Iwdl~s~~~~~~i~~~~s-~~~~l~spDGklLatgs~DGsI~IWDl 295 (1074)
.|.+++|+|+|.+|++|+. +.+++|++....+...+..+.. +....+.+++.+|++|+.||.|++|++
T Consensus 340 ~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp CEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred CEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEEC
T ss_conf 5899999499899999959792999989999068998477786899998289999999927994899737
No 3
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=328.61 Aligned_cols=315 Identities=19% Similarity=0.259 Sum_probs=265.4
Q ss_pred CCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCC--CEEEEEECCCCCEEEEEECCCCCEEEEEECC-
Q ss_conf 6672279984479987999991289939999978990999987999--3379950799894799993899999999869-
Q 001462 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKP--TALMSLCGLSSPVDSVAFDSAEVLVLAGAST- 79 (1074)
Q Consensus 3 ktG~~v~~L~gHss~VtsIafSPdg~~lLaTGs~DGtI~IWDi~t~--k~l~sl~~hs~~VtsIafSpdg~~LatGs~D- 79 (1074)
+.+..+..|.+|.+.|++++|+|++ ++|++|+.||.|+|||+..+ .....+..|...|.+++|+|++..|++++.+
T Consensus 47 ~~~~~~~~~~~h~~~v~~~~~spdg-~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~ 125 (611)
T 1nr0_A 47 GSLTDTEIYTEHSHQTTVAKTSPSG-YYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGR 125 (611)
T ss_dssp TCSSCCEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCS
T ss_pred CCCCCCEEECCCCCCEEEEEECCCC-CEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCC
T ss_conf 8724273765899865999999999-689999489978994898984156676225578448999899999799998997
Q ss_pred ---CEEEEEECCCCEEEEEEECCCCCEEEEEECCCCC-EEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCC
Q ss_conf ---9199998699906999807899838999937998-999997898099998899907999817998748999968999
Q 001462 80 ---GVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGE-FFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR 155 (1074)
Q Consensus 80 ---G~I~IWDl~sgk~i~tl~~h~~~VtsIafSPdg~-~LaSgs~DGsI~IWDi~sg~~i~~lk~h~~~VssIafSPdG~ 155 (1074)
+.|++|| .+.....+.+|...|.+++|+|++. .|++++.|+.|++||...+++...+.+|...|.+++|+|++.
T Consensus 126 ~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~ 203 (611)
T 1nr0_A 126 ERFGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGS 203 (611)
T ss_dssp SCSEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSS
T ss_pred CCEEEEEEEE--CCCCCCEECCCCCCCEEEEECCCCCEEEEEEECCCEEEEEECCCCEEEEEECCCCCCEEEEEECCCCC
T ss_conf 7366999963--89976325478898369998899982999992898099997999757665200257169999979999
Q ss_pred EEEEEECCCEEEEEECCCCCEEEEEE-------ECCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCC---
Q ss_conf 99999779949999989990689963-------04887589997599969999968993999988997088751799---
Q 001462 156 WVVSGGFDNVVKVWDLTAGKLLHDFK-------FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPE--- 225 (1074)
Q Consensus 156 ~LvSgs~DGsI~IWDl~tgk~i~~l~-------~h~g~ItsLafSPdg~lLaTGs~DGtI~IWDl~tge~i~~l~~~--- 225 (1074)
+|++++.|+.|++||+.+++....+. +|.+.|.+++|+|++.+|++++.|+.|++||+.+++++..+..+
T Consensus 204 ~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~ 283 (611)
T 1nr0_A 204 LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRI 283 (611)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSG
T ss_pred EEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCC
T ss_conf 89999899919998899982866513664323566787899999799999999908980999968887013440478876
Q ss_pred CCCEEEEEEECCCCEEEEE-ECCCEEEEEECCCEEEECCCCCC-CEEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEE
Q ss_conf 8884799991699899999-79949999936872320102687-614579945999999998799299999479932453
Q 001462 226 VTGVHAITFHPDGRTLFSG-FDDNLKVYSWEPVICHDSVDMGW-STLGDLCINDGKLLGCSFYRNSVGIWVADVSHVEPY 303 (1074)
Q Consensus 226 ~~~ItsIafSPDG~~LasG-sd~~I~Iwdl~s~~~~~~i~~~~-s~~~~l~spDGklLatgs~DGsI~IWDld~~~l~~~ 303 (1074)
......+.| ++..++++ .++.+++|+.........+..+. .+....+++||++|++++.|+.|++|++..+.....
T Consensus 284 ~~~~~~~~~--~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 284 EDQQLGIIW--TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRV 361 (611)
T ss_dssp GGCEEEEEE--CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEC
T ss_pred CCEEEEEEE--CCCEEEEEECCCCEEEEECCCCCCCEEECCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEE
T ss_conf 640689997--388799995899689996889974469837888889999918999899995898499997887925632
Q ss_pred ECCCCCCCCCCEEEEEECCCCC
Q ss_conf 1278999998631999969999
Q 001462 304 GVGAPEPDQSICTEVKFNPPGS 325 (1074)
Q Consensus 304 ~l~~~~~~~~~ItsVaFSPDGs 325 (1074)
. ...|...+.+++|++++.
T Consensus 362 ~---~~~h~~~v~~~~~s~~~~ 380 (611)
T 1nr0_A 362 F---PDVHATMITGIKTTSKGD 380 (611)
T ss_dssp S---SCSCSSCEEEEEECTTSC
T ss_pred C---CCCCCCEEEEEEECCCCC
T ss_conf 1---667765078999878996
No 4
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=324.34 Aligned_cols=288 Identities=18% Similarity=0.319 Sum_probs=228.7
Q ss_pred EEEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEE
Q ss_conf 27998447998799999128993999997899099998799933799507998947999938999999998699199998
Q 001462 7 KLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWD 86 (1074)
Q Consensus 7 ~v~~L~gHss~VtsIafSPdg~~lLaTGs~DGtI~IWDi~t~k~l~sl~~hs~~VtsIafSpdg~~LatGs~DG~I~IWD 86 (1074)
....+.+|.+.|++++|+|++ .++++|+.||.|++|++.+++.+..+.+|...|.+++|+|++.+|++++.||.|++||
T Consensus 607 ~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd 685 (1249)
T 3sfz_A 607 SRLVVRPHTDAVYHACFSQDG-QRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWD 685 (1249)
T ss_dssp CSEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CEEEEECCCCCEEEEEECCCC-CEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCEEEEEE
T ss_conf 227871666648999987999-9899994889499999899978887606777789999926999899981899599987
Q ss_pred CCCCEEEEEEECCCCCEEEEEECC--CCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCC
Q ss_conf 699906999807899838999937--998999997898099998899907999817998748999968999999997799
Q 001462 87 LEESKMVRTLTGHKSNCTAVEFHP--FGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDN 164 (1074)
Q Consensus 87 l~sgk~i~tl~~h~~~VtsIafSP--dg~~LaSgs~DGsI~IWDi~sg~~i~~lk~h~~~VssIafSPdG~~LvSgs~DG 164 (1074)
+.+++.+..+.+|...|.++.|++ ++.++++++.||.|++||+.++.+...+.+|...|.+++|+|++.++++++.||
T Consensus 686 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg 765 (1249)
T 3sfz_A 686 SATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADG 765 (1249)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSS
T ss_pred CCCCCEEEEECCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEECCCCCHHHEECCCCCCEEEEEEECCCCEEEEEECCC
T ss_conf 79993689995899737999984089965999980897099998999634220127779788999925999899997898
Q ss_pred EEEEEECCCCCEEEEEEEC-------------CCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEC-CCCCCEE
Q ss_conf 4999998999068996304-------------8875899975999699999689939999889970887517-9988847
Q 001462 165 VVKVWDLTAGKLLHDFKFH-------------EGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTR-PEVTGVH 230 (1074)
Q Consensus 165 sI~IWDl~tgk~i~~l~~h-------------~g~ItsLafSPdg~lLaTGs~DGtI~IWDl~tge~i~~l~-~~~~~It 230 (1074)
.|++||+.++.....+... ...+.+++|+|++..+++++ ++.+.+||+.++.....+. .|...+.
T Consensus 766 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~~~~~v~ 844 (1249)
T 3sfz_A 766 TLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHTGHHSTIQ 844 (1249)
T ss_dssp EEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEECSSSSCCC
T ss_pred EEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEC-CCCEEEEEECCCCCEEEECCCCCCCEE
T ss_conf 5999968888655302023210246776445650179999978998899975-895999995689723577478777607
Q ss_pred EEEEECCCCEEEEEE-CCCEEEEEECCCEEEECCCCCCC-EEEEEEECCCCEEEEEECCCEEEEEECC
Q ss_conf 999916998999997-99499999368723201026876-1457994599999999879929999947
Q 001462 231 AITFHPDGRTLFSGF-DDNLKVYSWEPVICHDSVDMGWS-TLGDLCINDGKLLGCSFYRNSVGIWVAD 296 (1074)
Q Consensus 231 sIafSPDG~~LasGs-d~~I~Iwdl~s~~~~~~i~~~~s-~~~~l~spDGklLatgs~DGsI~IWDld 296 (1074)
+++|+|++.++++++ ++.+++|++........+..+.. +....+.+++.+|++++.||.|++|++.
T Consensus 845 ~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 845 YCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETK 912 (1249)
T ss_dssp EEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHH
T ss_pred EEEECCCCCEEEEEECCCEEEEEECCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECC
T ss_conf 99982788889999479869999867895653227876656899998999989999589728988746
No 5
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=317.47 Aligned_cols=339 Identities=20% Similarity=0.339 Sum_probs=286.3
Q ss_pred CCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECC--CCCEEEEEECCC
Q ss_conf 667227998447998799999128993999997899099998799933799507998947999938--999999998699
Q 001462 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDS--AEVLVLAGASTG 80 (1074)
Q Consensus 3 ktG~~v~~L~gHss~VtsIafSPdg~~lLaTGs~DGtI~IWDi~t~k~l~sl~~hs~~VtsIafSp--dg~~LatGs~DG 80 (1074)
.++..+..+.+|.+.|.+++|+|++ .+|++|+.||.|++||+.+++.+..+.+|...|.+++|++ ++.++++++.||
T Consensus 645 ~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~ 723 (1249)
T 3sfz_A 645 ETGEKLLDIKAHEDEVLCCAFSSDD-SYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDF 723 (1249)
T ss_dssp TTCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTS
T ss_pred CCCCEEEEECCCCCCEEEEEEECCC-CEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCCEEEEEEECCC
T ss_conf 9997888760677778999992699-989998189959998779993689995899737999984089965999980897
Q ss_pred EEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEEEC-------------CCCCEEE
Q ss_conf 199998699906999807899838999937998999997898099998899907999817-------------9987489
Q 001462 81 VIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKG-------------HTRGINT 147 (1074)
Q Consensus 81 ~I~IWDl~sgk~i~tl~~h~~~VtsIafSPdg~~LaSgs~DGsI~IWDi~sg~~i~~lk~-------------h~~~Vss 147 (1074)
.|.+||+.+++....+.+|...|.+++|+|+++++++++.||.|++||+..+.....+.. ....+.+
T Consensus 724 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 803 (1249)
T 3sfz_A 724 FLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKC 803 (1249)
T ss_dssp CEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCC
T ss_pred EEEEEECCCCCHHHEECCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCEEEE
T ss_conf 09999899963422012777978899992599989999789859999688886553020232102467764456501799
Q ss_pred EEECCCCCEEEEEECCCEEEEEECCCCCEEEEEE-ECCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCC
Q ss_conf 9996899999999779949999989990689963-048875899975999699999689939999889970887517998
Q 001462 148 IRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK-FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEV 226 (1074)
Q Consensus 148 IafSPdG~~LvSgs~DGsI~IWDl~tgk~i~~l~-~h~g~ItsLafSPdg~lLaTGs~DGtI~IWDl~tge~i~~l~~~~ 226 (1074)
++|+|++.++++++ ++.+.+||+.++.....+. .|.+.+.+++|+|++.++++++.||.|++|++.++..+..+..|.
T Consensus 804 ~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~ 882 (1249)
T 3sfz_A 804 CSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHL 882 (1249)
T ss_dssp CCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCS
T ss_pred EEECCCCCEEEEEC-CCCEEEEEECCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEECCCCC
T ss_conf 99978998899975-89599999568972357747877760799982788889999479869999867895653227876
Q ss_pred CCEEEEEEECCCCEEEEEE-CCCEEEEEECCCEEE--------------------------------------ECCCCCC
Q ss_conf 8847999916998999997-994999993687232--------------------------------------0102687
Q 001462 227 TGVHAITFHPDGRTLFSGF-DDNLKVYSWEPVICH--------------------------------------DSVDMGW 267 (1074)
Q Consensus 227 ~~ItsIafSPDG~~LasGs-d~~I~Iwdl~s~~~~--------------------------------------~~i~~~~ 267 (1074)
..|.+++|+|+|.++++++ ++.+++|+....... .......
T Consensus 883 ~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 962 (1249)
T 3sfz_A 883 SWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEA 962 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCS
T ss_pred CCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCEEEECCCC
T ss_conf 65689999899998999958972898874665201021133103689759986899813776248984476508972567
Q ss_pred CEEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEECC
Q ss_conf 61457994599999999879929999947993245312789999986319999699992104999896147606896357
Q 001462 268 STLGDLCINDGKLLGCSFYRNSVGIWVADVSHVEPYGVGAPEPDQSICTEVKFNPPGSHSLEKVGIIGRSTSGFRSTSPD 347 (1074)
Q Consensus 268 s~~~~l~spDGklLatgs~DGsI~IWDld~~~l~~~~l~~~~~~~~~ItsVaFSPDGs~~La~vlavG~stG~lr~ivpD 347 (1074)
......+++++.++++|+.+|.|.+|++..+...... .+|...+.+++|+|||. .++.+...|.++.+ +
T Consensus 963 ~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~----~~h~~~v~~l~~s~dg~-----~l~s~~~dg~i~vw--d 1031 (1249)
T 3sfz_A 963 QVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSG----VGHKKAVRHIQFTADGK-----TLISSSEDSVIQVW--N 1031 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEEC----CCCSSCCCCEEECSSSS-----CEEEECSSSBEEEE--E
T ss_pred CEEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEC----CCCCCCEEEEEECCCCC-----EEEEECCCCEEEEE--E
T ss_conf 2789999589977999869998899975787234430----36777168999989999-----89998699879999--8
Q ss_pred CCCCCEE
Q ss_conf 7643069
Q 001462 348 YETKDIK 354 (1074)
Q Consensus 348 ~et~eIv 354 (1074)
..+++..
T Consensus 1032 ~~~~~~~ 1038 (1249)
T 3sfz_A 1032 WQTGDYV 1038 (1249)
T ss_dssp TTTTEEE
T ss_pred CCCCCEE
T ss_conf 7999668
No 6
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=1.00 E-value=1 Score=317.28 Aligned_cols=324 Identities=26% Similarity=0.454 Sum_probs=250.6
Q ss_pred CEEEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEE
Q ss_conf 22799844799879999912899399999789909999879993379950799894799993899999999869919999
Q 001462 6 YKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLW 85 (1074)
Q Consensus 6 ~~v~~L~gHss~VtsIafSPdg~~lLaTGs~DGtI~IWDi~t~k~l~sl~~hs~~VtsIafSpdg~~LatGs~DG~I~IW 85 (1074)
+..+.|.||.+.|+|++|+|+| ++|++|+.|+.|+|||. +++.+..+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus 7 ~e~~~L~GH~~~V~~~a~spdg-~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vW 84 (577)
T 2ymu_A 7 KERNRLEAHSSSVRGVAFSPDG-QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLW 84 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTS-SCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEEEEECCCCCCEEEEEECCCC-CEEEEEECCCEEEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEE
T ss_conf 8943987899857999998998-99999938998999979-997899996898998999998999999999698979999
Q ss_pred ECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEE-------------------------------
Q ss_conf 8699906999807899838999937998999997898099998899907-------------------------------
Q 001462 86 DLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGC------------------------------- 134 (1074)
Q Consensus 86 Dl~sgk~i~tl~~h~~~VtsIafSPdg~~LaSgs~DGsI~IWDi~sg~~------------------------------- 134 (1074)
|+ +++.+..+.+|...|.+++|+|+++++++++.|+.+++|+......
T Consensus 85 d~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 163 (577)
T 2ymu_A 85 NR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTV 163 (577)
T ss_dssp ET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEE
T ss_pred EC-CCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEECCCCCCEEEECCCCCCCEEEEEEECCCCCCEECCCCCCE
T ss_conf 89-99789999789998899999899998999807983352023552001104777743555420377632002555310
Q ss_pred ---------EEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECC
Q ss_conf ---------99981799874899996899999999779949999989990689963048875899975999699999689
Q 001462 135 ---------IHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSAD 205 (1074)
Q Consensus 135 ---------i~~lk~h~~~VssIafSPdG~~LvSgs~DGsI~IWDl~tgk~i~~l~~h~g~ItsLafSPdg~lLaTGs~D 205 (1074)
......+...+.++.|+|++.++++++.|+.|++||. +++.+..+..|...+.+++|+|++.+|++++.|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d 242 (577)
T 2ymu_A 164 KLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD 242 (577)
T ss_dssp EEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred ECCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCEEEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEECC
T ss_conf 0000000000002687763566541699778999859998999949-996899994688988999997999999999189
Q ss_pred CEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEEEEE-CCCEEEEEECCCEEEECCCCCCCEEEEEEECCCCEEEEE
Q ss_conf 9399998899708875179988847999916998999997-994999993687232010268761457994599999999
Q 001462 206 RTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGF-DDNLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCS 284 (1074)
Q Consensus 206 GtI~IWDl~tge~i~~l~~~~~~ItsIafSPDG~~LasGs-d~~I~Iwdl~s~~~~~~i~~~~s~~~~l~spDGklLatg 284 (1074)
+.|++|+.. ++.+..+..|...+.+++|+|++..+++++ ++.+++|+...............+....+.+++.+|+++
T Consensus 243 ~~i~~w~~~-~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~ 321 (577)
T 2ymu_A 243 KTVKLWNRN-GQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASA 321 (577)
T ss_dssp SCEEEECTT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CEEEEEECC-CCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEE
T ss_conf 989999599-9799998068898799999689999999959997999948995899970688976999999999999999
Q ss_pred ECCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEE
Q ss_conf 879929999947993245312789999986319999699992104999896147606896
Q 001462 285 FYRNSVGIWVADVSHVEPYGVGAPEPDQSICTEVKFNPPGSHSLEKVGIIGRSTSGFRST 344 (1074)
Q Consensus 285 s~DGsI~IWDld~~~l~~~~l~~~~~~~~~ItsVaFSPDGs~~La~vlavG~stG~lr~i 344 (1074)
+.|+.|++|+.+......+ ..+...+.+++|+|+|. .++.|...|.++.+
T Consensus 322 ~~d~~i~~w~~~~~~~~~~-----~~~~~~v~~~~~s~~g~-----~l~~~~~dg~v~~~ 371 (577)
T 2ymu_A 322 SDDKTVKLWNRNGQHLQTL-----TGHSSSVWGVAFSPDGQ-----TIASASDDKTVKLW 371 (577)
T ss_dssp ETTSCEEEEETTSCEEEEE-----CCCSSCEEEEEECTTSS-----EEEEEETTSEEEEE
T ss_pred ECCCEEEEEECCCCEEEEE-----ECCCCCEEEEEECCCCC-----EEEEEECCCEEEEE
T ss_conf 6999599996999725787-----47889779999989999-----99999699989999
No 7
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=1.00 E-value=1 Score=315.69 Aligned_cols=289 Identities=24% Similarity=0.405 Sum_probs=253.2
Q ss_pred EEEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCC-----CEEEEEECCCCCEEEEEECCCCCEEEEEECCCE
Q ss_conf 279984479987999991289939999978990999987999-----337995079989479999389999999986991
Q 001462 7 KLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKP-----TALMSLCGLSSPVDSVAFDSAEVLVLAGASTGV 81 (1074)
Q Consensus 7 ~v~~L~gHss~VtsIafSPdg~~lLaTGs~DGtI~IWDi~t~-----k~l~sl~~hs~~VtsIafSpdg~~LatGs~DG~ 81 (1074)
....+.+|.+.|+|++|++++..+|++|+.||.|++|++... .....+.+|...|.+++|++++.+|++|+.||.
T Consensus 374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE 453 (694)
T ss_dssp EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred HHHHCCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEECCCCCCEEEEEECCCCCEEEEEECCCC
T ss_conf 12110467740699986699888899980899489997568875555333242588884799999799999999808992
Q ss_pred EEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEE---ECCCCCEEEEEECCCC--CE
Q ss_conf 999986999069998078998389999379989999978980999988999079998---1799874899996899--99
Q 001462 82 IKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTY---KGHTRGINTIRFTPDG--RW 156 (1074)
Q Consensus 82 I~IWDl~sgk~i~tl~~h~~~VtsIafSPdg~~LaSgs~DGsI~IWDi~sg~~i~~l---k~h~~~VssIafSPdG--~~ 156 (1074)
|++||+.++.....+.+|...|.+++|+|++++|++++.|+.|++||.......... .+|...|.+++|+|++ .+
T Consensus 454 v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 533 (694)
T 3dm0_A 454 LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT 533 (694)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCE
T ss_pred EEEEECCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCCEEECCCCCCCCCCEEEEEEECCCCCCE
T ss_conf 89997999951368867999889999908999899994889799997899854043037788878679999917988655
Q ss_pred EEEEECCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEEC
Q ss_conf 99997799499999899906899630488758999759996999996899399998899708875179988847999916
Q 001462 157 VVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHP 236 (1074)
Q Consensus 157 LvSgs~DGsI~IWDl~tgk~i~~l~~h~g~ItsLafSPdg~lLaTGs~DGtI~IWDl~tge~i~~l~~~~~~ItsIafSP 236 (1074)
+++++.|+.|++||+..++....+.+|.+.|.+++|+|++.+|++++.||.|++||+.+++.+..+..+ ..+.+++|+|
T Consensus 534 l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp 612 (694)
T 3dm0_A 534 IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVIHALCFSP 612 (694)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCS-SCEEEEEECS
T ss_pred EEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEECCC-CCEEEEEECC
T ss_conf 999968985999989999278998678888889999189898999958994999988999567883389-9478999859
Q ss_pred CCCEEEEEECCCEEEEEECCCEEEECCCCCC--------------------CEEEEEEECCCCEEEEEECCCEEEEEECC
Q ss_conf 9989999979949999936872320102687--------------------61457994599999999879929999947
Q 001462 237 DGRTLFSGFDDNLKVYSWEPVICHDSVDMGW--------------------STLGDLCINDGKLLGCSFYRNSVGIWVAD 296 (1074)
Q Consensus 237 DG~~LasGsd~~I~Iwdl~s~~~~~~i~~~~--------------------s~~~~l~spDGklLatgs~DGsI~IWDld 296 (1074)
++.+++++.++++++|++........+.... ......+++||++|++|+.||.|+||++.
T Consensus 613 ~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 613 NRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp SSSEEEEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCCEEEEECCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCEEEEEECC
T ss_conf 98689997699789998999987332002456532002456645677404775148986899989997589849998535
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=1.00 E-value=1 Score=314.66 Aligned_cols=294 Identities=23% Similarity=0.378 Sum_probs=267.5
Q ss_pred CCCCEEEEEECCCCCEEEEEEECCC---CCEEEEEECCCEEEEEECCCCCE--EEEEECCCCCEEEEEECCCCCEEEEEE
Q ss_conf 6672279984479987999991289---93999997899099998799933--799507998947999938999999998
Q 001462 3 KRGYKLQEFVAHSANVNCISIGKKA---CRFLITGGDDQKVNLWAIGKPTA--LMSLCGLSSPVDSVAFDSAEVLVLAGA 77 (1074)
Q Consensus 3 ktG~~v~~L~gHss~VtsIafSPdg---~~lLaTGs~DGtI~IWDi~t~k~--l~sl~~hs~~VtsIafSpdg~~LatGs 77 (1074)
+.|..++.+.+|.+.|.+++|++++ ..+|++|+.|+.|++|++..... ...+.+|...|.+++|++++.++++++
T Consensus 20 ~~g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s 99 (321)
T 3ow8_A 20 QYGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSS 99 (321)
T ss_dssp -CEEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred HHHHEEEECCCCCCCEEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEE
T ss_conf 32004552156889679999824888888889998499989998898997436660056778889999889999899993
Q ss_pred CCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEE
Q ss_conf 69919999869990699980789983899993799899999789809999889990799981799874899996899999
Q 001462 78 STGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWV 157 (1074)
Q Consensus 78 ~DG~I~IWDl~sgk~i~tl~~h~~~VtsIafSPdg~~LaSgs~DGsI~IWDi~sg~~i~~lk~h~~~VssIafSPdG~~L 157 (1074)
.|+.|++||+.+++.+..+..+...+.+++|+|++++|++++.+|.|++|++..+.....+..+...+.+++|+|++++|
T Consensus 100 ~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l 179 (321)
T 3ow8_A 100 LDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYL 179 (321)
T ss_dssp TTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEE
T ss_pred CCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEEEECCCCCEE
T ss_conf 79809999789997989993798567999999999989998389919999867994667743899429999998999999
Q ss_pred EEEECCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEECC
Q ss_conf 99977994999998999068996304887589997599969999968993999988997088751799888479999169
Q 001462 158 VSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPD 237 (1074)
Q Consensus 158 vSgs~DGsI~IWDl~tgk~i~~l~~h~g~ItsLafSPdg~lLaTGs~DGtI~IWDl~tge~i~~l~~~~~~ItsIafSPD 237 (1074)
++++.||.|++||+.+++.+..+..|...|.+++|+|++.+|++++.|+.|++||+..+.....+..|...|.+++|+|+
T Consensus 180 asg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~ 259 (321)
T 3ow8_A 180 ASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPD 259 (321)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred EEECCCCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCEEEEEECCC
T ss_conf 99928983999999999099998025896018999489998999909980999878996325898688882689999799
Q ss_pred CCEEEEEE-CCCEEEEEECCCEEEECCCCCC-CEEEEEEECCCCEEEEEECCCEEEEEECC
Q ss_conf 98999997-9949999936872320102687-61457994599999999879929999947
Q 001462 238 GRTLFSGF-DDNLKVYSWEPVICHDSVDMGW-STLGDLCINDGKLLGCSFYRNSVGIWVAD 296 (1074)
Q Consensus 238 G~~LasGs-d~~I~Iwdl~s~~~~~~i~~~~-s~~~~l~spDGklLatgs~DGsI~IWDld 296 (1074)
+.+|++++ ++.+++|++....+...+..+. .+....+.+++.+|++++.||.|++||..
T Consensus 260 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 260 DTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CCEEEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECC
T ss_conf 9989998189809999499988888983787738999998999999997589808999577
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=1.00 E-value=1 Score=311.07 Aligned_cols=288 Identities=24% Similarity=0.379 Sum_probs=258.9
Q ss_pred CCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEE
Q ss_conf 72279984479987999991289939999978990999987999337995079989479999389999999986991999
Q 001462 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKL 84 (1074)
Q Consensus 5 G~~v~~L~gHss~VtsIafSPdg~~lLaTGs~DGtI~IWDi~t~k~l~sl~~hs~~VtsIafSpdg~~LatGs~DG~I~I 84 (1074)
......+.+|.+.|.+++|+|++ .+|++|+.||.|++||..++..+..+..|...|.+++|+|++.+|++++.|+.|++
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~-~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~i 123 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDS-RLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSI 123 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTS-SEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred CHHHEEECCCCCCEEEEEECCCC-CEEEEEECCCCEEEEECCCCCCCEEEECCCCCEEEEEECCCCCEEEEEECCCEEEE
T ss_conf 21100104877836899988999-99999818896899989998743376038861889999999999999808981999
Q ss_pred EECCCC----EEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEE
Q ss_conf 986999----0699980789983899993799899999789809999889990799981799874899996899999999
Q 001462 85 WDLEES----KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSG 160 (1074)
Q Consensus 85 WDl~sg----k~i~tl~~h~~~VtsIafSPdg~~LaSgs~DGsI~IWDi~sg~~i~~lk~h~~~VssIafSPdG~~LvSg 160 (1074)
|++... .....+.+|...+.++.|++++. +++++.|+.|++||+.++..+..+.+|...|.+++|+|++.++++|
T Consensus 124 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg 202 (340)
T 1got_B 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202 (340)
T ss_dssp EETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EECCCCCCCCEEEEEECCCCCCEEEEEECCCCC-EEEEECCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEE
T ss_conf 979668886136778448776389999879996-9999899929999899991889976999866899998999999999
Q ss_pred ECCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECC--CCCCEEEEEEECCC
Q ss_conf 7799499999899906899630488758999759996999996899399998899708875179--98884799991699
Q 001462 161 GFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRP--EVTGVHAITFHPDG 238 (1074)
Q Consensus 161 s~DGsI~IWDl~tgk~i~~l~~h~g~ItsLafSPdg~lLaTGs~DGtI~IWDl~tge~i~~l~~--~~~~ItsIafSPDG 238 (1074)
+.|+.|++||++++.....+..|...|.+++|+|++.+|++++.||.|++||+..++.+..+.. +...+.+++|+|+|
T Consensus 203 ~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g 282 (340)
T 1got_B 203 ACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSG 282 (340)
T ss_dssp ETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTS
T ss_pred ECCCCEEEEECCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCEEEEEECCCC
T ss_conf 38993999778998167897487687799999499998999748981999988999189997268852416999998999
Q ss_pred CEEEEEEC-CCEEEEEECCCEEEECCCCCCC-EEEEEEECCCCEEEEEECCCEEEEEE
Q ss_conf 89999979-9499999368723201026876-14579945999999998799299999
Q 001462 239 RTLFSGFD-DNLKVYSWEPVICHDSVDMGWS-TLGDLCINDGKLLGCSFYRNSVGIWV 294 (1074)
Q Consensus 239 ~~LasGsd-~~I~Iwdl~s~~~~~~i~~~~s-~~~~l~spDGklLatgs~DGsI~IWD 294 (1074)
.+|++|+. +.+++|+.........+..+.. +....+.++|.+|++++.||.|+||+
T Consensus 283 ~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 283 RLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEECC
T ss_conf 9999977999099988413838658505778488999829999899972886189559
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=1.00 E-value=1 Score=310.89 Aligned_cols=291 Identities=21% Similarity=0.393 Sum_probs=260.2
Q ss_pred CCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCC-----CCEEEEEECCCCCEEEEEECCCCCEEEEEECC
Q ss_conf 7227998447998799999128993999997899099998799-----93379950799894799993899999999869
Q 001462 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGK-----PTALMSLCGLSSPVDSVAFDSAEVLVLAGAST 79 (1074)
Q Consensus 5 G~~v~~L~gHss~VtsIafSPdg~~lLaTGs~DGtI~IWDi~t-----~k~l~sl~~hs~~VtsIafSpdg~~LatGs~D 79 (1074)
-.+...|.+|.+.|.+++|+|++..+|++|+.|+.|++|++.. +..+..+.+|...|.+++|++++.+|++++.|
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D 86 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWD 86 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCEEEEEECC
T ss_conf 99997990554217899806999648998268862999537788752352326970780027899987999999999389
Q ss_pred CEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCC------
Q ss_conf 91999986999069998078998389999379989999978980999988999079998179987489999689------
Q 001462 80 GVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPD------ 153 (1074)
Q Consensus 80 G~I~IWDl~sgk~i~tl~~h~~~VtsIafSPdg~~LaSgs~DGsI~IWDi~sg~~i~~lk~h~~~VssIafSPd------ 153 (1074)
|.|++||+.+++.+..+.+|...|.+++|+|++.+|++++.|+.|++||++ +.++..+.+|...+.++.|.|.
T Consensus 87 ~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 165 (319)
T 3frx_A 87 KTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDD 165 (319)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------
T ss_pred CEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECC-CCEEEEEECCCCCEEEEEECCCCCCCCC
T ss_conf 989999899897048973679968999996999999999489929999779-9808998426785897898268888888
Q ss_pred CCEEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEE
Q ss_conf 99999997799499999899906899630488758999759996999996899399998899708875179988847999
Q 001462 154 GRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAIT 233 (1074)
Q Consensus 154 G~~LvSgs~DGsI~IWDl~tgk~i~~l~~h~g~ItsLafSPdg~lLaTGs~DGtI~IWDl~tge~i~~l~~~~~~ItsIa 233 (1074)
+.++++++.|+.|++||+..++....+.+|...|.+++|+|++.+|++++.||.|++||+.+++.+..+..+ ..+.+++
T Consensus 166 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~ 244 (319)
T 3frx_A 166 SVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLA 244 (319)
T ss_dssp CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEEEE
T ss_pred CCEEEEEECCCEEEEEECCCCHHHEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCC-CCEEEEE
T ss_conf 559999908997999889864201024477785799999699999999858996999999999578996389-9578999
Q ss_pred EECCCCEEEEEECCCEEEEEECCCEEEECCCC---------CCCEEEEEEECCCCEEEEEECCCEEEEEECCC
Q ss_conf 91699899999799499999368723201026---------87614579945999999998799299999479
Q 001462 234 FHPDGRTLFSGFDDNLKVYSWEPVICHDSVDM---------GWSTLGDLCINDGKLLGCSFYRNSVGIWVADV 297 (1074)
Q Consensus 234 fSPDG~~LasGsd~~I~Iwdl~s~~~~~~i~~---------~~s~~~~l~spDGklLatgs~DGsI~IWDld~ 297 (1074)
|+|++.+++++.++++++|+++.......+.. ........+++||++|++|+.||.|++|++..
T Consensus 245 ~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 245 FSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp ECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred ECCCCCEEEEECCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEEEE
T ss_conf 9489889999908971999717672563158630234667676345789989997999840475599999762
Done!