Your job contains 1 sequence.
>001468
MAEHQNSTVKPAAGKPSGNAAANTYAINLDNFSKRLKMLYSHWTEHNSDLWGDSNALAVA
TPPVSEDLRYLKSSALNVWLVGYEFPETIMVFLKKQIHFLCSQKKASLLEVIKKSAKEAV
GIEVVIHVKGKTDDGSGLMDKIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKL
KKANFALSDVSNGFSDLFAIKDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSH
SSLMDETEKAILEPARIKVKLKAENVDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSV
IICAVGSRYNSYCSNVARTFLIDANTVQSKAYEVLLKAHEAAISALKSGNKVSAAYKAAS
TVVEKDAPELAANLTRNAGTGIGLEFRESGLSLNAKNDRILKAGMVFNVSLGFQNLQTEN
KNPKTQKFSVLLADTVIVGEKVPDIVTSKSSKAVKDVAYSFNEDDEEEEQPKVKAEVKGG
EPTLSKATLRSDHQEMSKEELRRQHQAELARQKNEETARRLAGGGSSTADNRGSVKTIGD
LVAYKNVNDLPPPRDLMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRSCYIRI
IFNVPGTSFTPHDSNSLKFQGSIYLKEVSLRSKDSRHISEVVQQIKTLRRQVTSRESERA
ERATLVTQEKLQLASAKFKPLKLFDLWIRPPFGGRGRKLTGSLEAHTNGFRYSTSRPDER
VDVMYGNIKHAFFQPAEREMITLLHFHLHNHIMVGNKKTKDVQFYIEVMDVVQTLGGGKR
SAYDPDEVEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFHGV
PHKASAFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVL
RIDSIPSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEA
SDSESENSQDSDQGYEPSDVQSDSVSDDENDDSESLVESEDDEEEDSEEDSEEDKGKTWE
ELEREASYADREKGADSDSEDERKRRKMKAFGKARAPEKRNPGGSLPKRAKLR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001468
(1073 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2132756 - symbol:SPT16 "global transcription f... 3836 0. 1
ZFIN|ZDB-GENE-031118-96 - symbol:supt16h "suppressor of T... 1454 1.8e-183 3
UNIPROTKB|E1BNP8 - symbol:SUPT16H "Uncharacterized protei... 1658 1.5e-177 2
UNIPROTKB|E2REU7 - symbol:SUPT16H "Uncharacterized protei... 1656 2.4e-177 2
UNIPROTKB|Q9Y5B9 - symbol:SUPT16H "FACT complex subunit S... 1656 2.4e-177 2
MGI|MGI:1890948 - symbol:Supt16 "suppressor of Ty 16" spe... 1654 4.0e-177 2
UNIPROTKB|F1S8K5 - symbol:SUPT16H "Uncharacterized protei... 1652 6.5e-177 2
RGD|1310032 - symbol:Supt16h "suppressor of Ty 16 homolog... 1652 6.5e-177 2
DICTYBASE|DDB_G0282677 - symbol:spt16 "FACT complex subun... 1647 2.2e-174 2
POMBASE|SPBP8B7.19 - symbol:spt16 "FACT complex subunit S... 1619 3.0e-170 2
UNIPROTKB|Q9W603 - symbol:supt16h "FACT complex subunit S... 1586 4.3e-169 2
FB|FBgn0002183 - symbol:dre4 "dre4" species:7227 "Drosoph... 1576 8.3e-164 2
ASPGD|ASPL0000031805 - symbol:AN5102 species:162425 "Emer... 1510 7.6e-161 2
WB|WBGene00018849 - symbol:F55A3.3 species:6239 "Caenorha... 1548 6.8e-159 1
CGD|CAL0005222 - symbol:CDC68 species:5476 "Candida albic... 839 1.0e-137 3
UNIPROTKB|Q5A1D5 - symbol:SPT16 "FACT complex subunit SPT... 839 1.0e-137 3
TAIR|locus:2139217 - symbol:GTC2 species:3702 "Arabidopsi... 1260 2.2e-128 1
SGD|S000003175 - symbol:SPT16 "Subunit of the heterodimer... 1165 2.6e-118 1
WB|WBGene00018852 - symbol:F55A3.7 species:6239 "Caenorha... 266 5.5e-39 2
UNIPROTKB|Q3ACM8 - symbol:CHY_1272 "Putative proline dipe... 143 2.9e-07 2
TIGR_CMR|CHY_1272 - symbol:CHY_1272 "putative proline dip... 143 2.9e-07 2
TIGR_CMR|DET_0715 - symbol:DET_0715 "metallopeptidase, M2... 133 2.7e-05 1
DICTYBASE|DDB_G0282075 - symbol:xpnpep3 "peptidase M24 fa... 134 3.9e-05 1
UNIPROTKB|Q3AAZ1 - symbol:pepP "Aminopeptidase P" species... 129 0.00019 2
TIGR_CMR|CHY_1873 - symbol:CHY_1873 "aminopeptidase P" sp... 129 0.00019 2
ASPGD|ASPL0000043252 - symbol:AN1582 species:162425 "Emer... 118 0.00033 2
>TAIR|locus:2132756 [details] [associations]
symbol:SPT16 "global transcription factor C" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0009987 "cellular process" evidence=IEA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005719 "nuclear euchromatin"
evidence=IDA] [GO:0035101 "FACT complex" evidence=IDA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=IMP] [GO:0005829 "cytosol" evidence=RCA] [GO:0007346
"regulation of mitotic cell cycle" evidence=RCA] [GO:0008284
"positive regulation of cell proliferation" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] InterPro:IPR000994
Pfam:PF00557 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005730
GO:GO:0006355 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
GO:GO:0010228 GO:GO:0005719 Gene3D:3.90.230.10 SUPFAM:SSF55920
EMBL:AF080119 EMBL:AL161518 GO:GO:0035101 InterPro:IPR013719
Pfam:PF08512 eggNOG:COG5406 HOGENOM:HOG000209079 OMA:MEIIDAD
InterPro:IPR013953 Pfam:PF08644 EMBL:AB493678 IPI:IPI00520940
PIR:T01906 RefSeq:NP_192809.1 UniGene:At.27606
ProteinModelPortal:O82491 SMR:O82491 STRING:O82491 PaxDb:O82491
PRIDE:O82491 EnsemblPlants:AT4G10710.1 GeneID:826665
KEGG:ath:AT4G10710 TAIR:At4g10710 InParanoid:O82491
PhylomeDB:O82491 ProtClustDB:CLSN2686053 Genevestigator:O82491
GermOnline:AT4G10710 Uniprot:O82491
Length = 1074
Score = 3836 (1355.4 bits), Expect = 0., P = 0.
Identities = 731/1067 (68%), Positives = 867/1067 (81%)
Query: 1 MAEHQNSTVK-PAAGKPSGNAAANTYAINLDNFSKRLKMLYSHWTEHNSDLWGDSNALAV 59
MA+ +N + P +G P A NTY+I++ NF R + LY HW +H++DLWG ++ALA+
Sbjct: 1 MADSRNGNARAPPSGVPP--KAGNTYSIDVKNFISRARALYEHWKKHSADLWGSADALAI 58
Query: 60 ATPPVSEDLRYLKSSALNVWLVGYEFPETIMVFLKKQIHFLCSQKKASLLEVIKKSAKEA 119
ATPP S+DLRYLKSSALN+WL+GYEFP+TIMVF KKQIHFLCS+ KASLLEV+KK A +
Sbjct: 59 ATPPASDDLRYLKSSALNIWLLGYEFPDTIMVFTKKQIHFLCSRNKASLLEVVKKPAHDE 118
Query: 120 VGIEVVIHVKGKTDDGSGLMDKIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLETWNEK 179
+ ++V++HVK K DDG+GLMD IF A+ D S+ G +S VVGHI+REAPEGKLLETW E+
Sbjct: 119 LKLDVIMHVKPKGDDGTGLMDAIFRAIRDLSRGDGNDSQVVGHIAREAPEGKLLETWTER 178
Query: 180 LKKANFALSDVSNGFSDLFAIKDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVS 239
LK ANF D++ G SDLFA+KDDTE+ ++KKAA+L+ SVMK VVP LE IDEEK V+
Sbjct: 179 LKNANFQFVDITGGLSDLFAVKDDTEVMSVKKAAYLAYSVMKNVVVPNLESAIDEEKDVT 238
Query: 240 HSSLMDETEKAILEPARIKVKLKAENVDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTS 299
HS+LMD TEKAILEP + VKLK ENVDICYPPIFQSGG+FDLKPSA+SND L YD S
Sbjct: 239 HSALMDLTEKAILEPTKASVKLKPENVDICYPPIFQSGGKFDLKPSAASNDELLTYDPAS 298
Query: 300 VIICAVGSRYNSYCSNVARTFLIDANTVQSKAYEVLLKAHEAAISALKSGNKVSAAYKAA 359
+IICAVG+RYNSYCSNVART+LIDA ++QSKAYEVLLKAHEAAI AL+SG K++ Y+AA
Sbjct: 299 IIICAVGARYNSYCSNVARTYLIDATSLQSKAYEVLLKAHEAAIDALRSGRKINTVYQAA 358
Query: 360 STVVEKDAPELAANLTRNAGTGIGLEFRESGLSLNAKNDRILKAGMVFNVSLGFQNLQTE 419
+VVEK+APE LT++AGTGIGLEFRESGL++NAKND++L+ M FNVSLGFQNL+ E
Sbjct: 359 LSVVEKNAPEFVDKLTKSAGTGIGLEFRESGLNINAKNDKVLRPKMAFNVSLGFQNLECE 418
Query: 420 NKN-PKTQKFSVLLADTVIVGEKVPDIVTSKSSKAVKDVAYSFNEDDEEEEQPKVKAEVK 478
+++ K +KFS+LLADTV+V ++ P+++T K SK+VKDVAYSF ED EEEE+P+ KA
Sbjct: 419 SESRSKNKKFSLLLADTVLVTDQKPELLT-KCSKSVKDVAYSFKED-EEEEKPRKKARTS 476
Query: 479 GGEPTLSKATLRSDHQEMSKEELRRQHQAELARQKNEETARRLAGGGSSTADNRGSVKTI 538
G E ++K LRSD +SKEELR+QHQAELARQKNEETARRLAG S D+R + KT
Sbjct: 477 GSENYITKTALRSDDHVVSKEELRKQHQAELARQKNEETARRLAGDSSGAGDSRSTAKTS 536
Query: 539 GDLVAYKNVNDLPPPRDLMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRSCYI 598
D+VAYKNVND+P ++LMIQVD +NEA+LLPIYGS+VPFHVAT+++VS QDTNR+CYI
Sbjct: 537 ADVVAYKNVNDMPH-KELMIQVDTRNEAVLLPIYGSLVPFHVATIRTVSGNQDTNRNCYI 595
Query: 599 RIIFNVPGTSFTPHDSNSLKFQGSIYLKEVSLRSKDSRHISEVVQQIKTLRRQVTSRESE 658
RIIFNVPGT F PHDSNSLK QG+IYLKEVS R+KDSRH SEV QQIKTLRRQV +RESE
Sbjct: 596 RIIFNVPGTPFNPHDSNSLKNQGAIYLKEVSFRTKDSRHSSEVTQQIKTLRRQVMARESE 655
Query: 659 RAERATLVTQEKLQLASAKFKPLKLFDLWIRPPFGGRGRKLTGSLEAHTNGFRYSTSRPD 718
RAERATLVTQEKLQLA KFKPL+L +LWIRPPF GR +K+ G+LEAH NGFRYST+RPD
Sbjct: 656 RAERATLVTQEKLQLAGNKFKPLRLSELWIRPPFSGR-KKIPGTLEAHANGFRYSTTRPD 714
Query: 719 ERVDVMYGNIKHAFFQPAEREMITLLHFHLHNHIMVGNKKTKDVQFYIEVMDVVQTLGGG 778
ERVDV++ NIKHAFFQPAE+EMITLLHFHLHNHIMVG KKTKDVQFY+EVMDVVQ+LGGG
Sbjct: 715 ERVDVLFANIKHAFFQPAEKEMITLLHFHLHNHIMVGTKKTKDVQFYVEVMDVVQSLGGG 774
Query: 779 KRSAYDPDEVEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFH 838
+RSAYDPDE++EEQRER RKNKINMDF +F NRVND+W PQF + DLEFDQPLRELGFH
Sbjct: 775 RRSAYDPDEIDEEQRERDRKNKINMDFNHFANRVNDMWQLPQFASLDLEFDQPLRELGFH 834
Query: 839 GVPHKASAFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRD 898
GVPHK SAFI+PTSSCLVELIE PF+V++LSEIEIVNLERVG GQKNFDM I+FKDFK+D
Sbjct: 835 GVPHKTSAFIIPTSSCLVELIEYPFLVVSLSEIEIVNLERVGFGQKNFDMAIIFKDFKKD 894
Query: 899 VLRIDSIPSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNM 958
VLR+DS+P+SSL+GIKEWLDTTD+KYYES+LNLNWR ILKTITDDP+ FI+DGGWEFLN+
Sbjct: 895 VLRVDSVPTSSLEGIKEWLDTTDIKYYESKLNLNWRQILKTITDDPQSFIDDGGWEFLNL 954
Query: 959 EAXXXXXXXXXXXXXGYEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKT 1018
+ GYEP KGKT
Sbjct: 955 DGSDSESGGSEESDKGYEPSDVEVESESEDEASESESLVESDDDEEEDSEQESEEEKGKT 1014
Query: 1019 WEELEREASYADREKGADSDSEDERKRRKMKAFGKARAPEKRNPGGS 1065
W+ELEREA+ ADRE G +SDSE+ERKRRKMKAFGK+R P GGS
Sbjct: 1015 WDELEREATNADREHGVESDSEEERKRRKMKAFGKSR-PGTSGGGGS 1060
>ZFIN|ZDB-GENE-031118-96 [details] [associations]
symbol:supt16h "suppressor of Ty 16 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0009987 "cellular
process" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000994 Pfam:PF00557 ZFIN:ZDB-GENE-031118-96
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987 InterPro:IPR013719
Pfam:PF08512 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 EMBL:BX248243 EMBL:CABZ01078837
IPI:IPI00997833 Ensembl:ENSDART00000126840 ArrayExpress:E7F5E9
Bgee:E7F5E9 Uniprot:E7F5E9
Length = 1077
Score = 1454 (516.9 bits), Expect = 1.8e-183, Sum P(3) = 1.8e-183
Identities = 312/805 (38%), Positives = 484/805 (60%)
Query: 174 ETWNEKLKKANFALSDVSNGFSDLFAIKDDTELTNIKKAAFLSSSVMKQFVVPKLEKVID 233
+ +++ K+ + D+S + A+K+D EL +KKAA +++ V +F ++ +++D
Sbjct: 192 DVFSKFFKERVMEIVDISTVVAYTMAVKEDGELALMKKAASITTDVFSKFFKERVMEIVD 251
Query: 234 EEKKVSHSSLMDETEKAILEPARIKVKLKAENVDICYPPIFQSGGEFDLKPSASSNDNYL 293
++KV HS L + EKAI E + + V++CYPPI QSGG + LK S S+ N++
Sbjct: 252 ADEKVKHSRLAESVEKAI-EDRKFLGGVDPSTVEMCYPPIIQSGGNYSLKFSVVSDKNHM 310
Query: 294 YYDSTSVIICAVGSRYNSYCSNVARTFLIDANTVQSKAYEVLLKAHEAAISALKSGNKVS 353
++ + I CA+G RY SYCSN+ RT ++D + Y LL+ E + +K G K+S
Sbjct: 311 HFGA---ITCAMGIRYKSYCSNLVRTLMVDPSQEMQDNYNFLLQVEEELLKEMKHGVKLS 367
Query: 354 AAYKAASTVVEKDAPELAANLTRNAGTGIGLEFRESGLSLNAKNDRILKAGMVFNVSLGF 413
AY A V+K+ P+L + LT+N G +G+EFRE L +N KN LK GMVF++SLGF
Sbjct: 368 EAYNAVMEFVKKEKPDLVSKLTKNLGFAMGIEFREGSLVINQKNQFKLKRGMVFSISLGF 427
Query: 414 QNL-QTENKNPKTQKFSVLLADTVIVGEKVPDIVTSKSSKAVKDVA-YSFNEDDEEEEQP 471
++ E K + +K+++ + DT+ + E+ V + K +K+V + N+D++E+E+
Sbjct: 428 ADMINKEGKKEEQKKYALFIGDTIQINEEDQATVLTPVKKKIKNVGIFLKNDDEDEDEEE 487
Query: 472 KVKAEVKGGEPTLSKATLRS-DHQEMSKEELRRQHQAELARQKNEETARRLAG--GGSST 528
AE G+ S A L EM+ EE RR HQ ELA Q NEE RRL GG
Sbjct: 488 GDNAEELLGKGARSAALLADRTRNEMTAEEKRRTHQKELANQVNEEAKRRLTEQKGGQQI 547
Query: 529 ADNRGSVKTIGDLVAYKNVNDLPPP---RDLMIQVDQKNEAILLPIYGSMVPFHVATVKS 585
R S V+YKNV+ +P RD+ I +D+K+E +++P++G PFH+AT+K+
Sbjct: 548 QKVRKSN------VSYKNVSQMPKEKDIRDMKIFIDKKHETVIMPVFGIATPFHIATIKN 601
Query: 586 VSSQQDTNRSCYIRIIFNVPGTSFTPHDSNSLKFQGSIYLKEVSLRSKD----------S 635
+S + + + Y+RI F VPG+S H+ N + ++KE++ R+ + S
Sbjct: 602 ISMSVEGDYT-YLRINFFVPGSSLGRHEGNIFPNPEATFVKEITYRASNLKSPGDHSVPS 660
Query: 636 RHISEVVQQIKTLRRQVTSRESERAERATLVTQEKLQLASAKFKPLKLFDLWIRPPFGGR 695
++ + IK ++++ +RE+E E+ +V Q+ L + + P KL DL+IRP +
Sbjct: 661 TNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQDSLVINLNRSNP-KLKDLYIRPNIAQK 719
Query: 696 GRKLTGSLEAHTNGFRYSTSRPDERVDVMYGNIKHAFFQPAEREMITLLHFHLHNHIMVG 755
++ GSLEAHTNGFR+++ R D +VD++Y NIKHA FQP + EMI +LHFHL N IM G
Sbjct: 720 --RMQGSLEAHTNGFRFTSVRGD-KVDILYNNIKHAIFQPCDGEMIIVLHFHLKNAIMFG 776
Query: 756 NKKTKDVQFYIEVMDVVQTLGGGKRSAYDPDEVEEEQRERARKNKINMDFQNFVNRVNDL 815
K+ DVQFY EV ++ LG + +D D++ EQ ER ++K+ F+NF+ +V L
Sbjct: 777 KKRHTDVQFYTEVGEITTDLGKHQHM-HDRDDLYAEQMEREMRHKLKSAFKNFIEKVESL 835
Query: 816 WGQPQFKAFDLEFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFVVITLSEIEIVN 875
+ +LEF+ P R+LGF G P++++ + PTSS L + E P V+TL E+E+V+
Sbjct: 836 TKE------ELEFEVPFRDLGFQGAPYRSTCLLQPTSSSLCNVTEWPPFVVTLDEVELVH 889
Query: 876 LERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSSSLDGIKEWLDTTDLKYYESRLNLNWRP 935
ERV KNFD+ IV+KD+ + V I+++P +SLD IKEWL++ D+KY E +LNW
Sbjct: 890 FERVQFHLKNFDVVIVYKDYNKKVTMINAVPVNSLDPIKEWLNSCDIKYTEGIQSLNWTK 949
Query: 936 ILKTITDDPEKFIEDGGWEFLNMEA 960
I+KTI DDPE F E GGW FL+ E+
Sbjct: 950 IMKTIVDDPEGFFEQGGWSFLDPES 974
Score = 280 (103.6 bits), Expect = 1.8e-183, Sum P(3) = 1.8e-183
Identities = 70/236 (29%), Positives = 130/236 (55%)
Query: 26 AINLDN--FSKRLKMLYSHWTEHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGY 83
A++LD F +R+K LY +W + D +G +A+ V+ V E++ Y KS+AL WL GY
Sbjct: 2 AVSLDKDAFYRRIKRLYGNWKK-GEDEFGKVDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 84 EFPETIMVFLKKQIHFLCSQKKASLLE--VIKKSAKEAVGIE-VVIHVKGKTDDGSGLMD 140
E +TIMVF + +I FL S+KK L+ + K + A G+ + + V+ K + D
Sbjct: 60 ELTDTIMVFCESKIIFLASKKKVEFLKQVAVTKGNENANGVPPITLLVREKNESNKVNFD 119
Query: 141 KIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKLKKANFALSDVSNGFSDLFAI 200
K+ A+ SK G VG ++ G+ +++W++ + D+S + A+
Sbjct: 120 KMIEAIRG-SKEG----KTVGVFIKDKFPGEYMKSWSDTITAEGLQKVDISTVVAYTMAV 174
Query: 201 KDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHS-SLMDETEKAILEPA 255
K+D EL +KKAA +++ V +F ++ +++D V+++ ++ ++ E A+++ A
Sbjct: 175 KEDGELALMKKAASITTDVFSKFFKERVMEIVDISTVVAYTMAVKEDGELALMKKA 230
Score = 84 (34.6 bits), Expect = 1.8e-183, Sum P(3) = 1.8e-183
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 1016 GKTWEELEREASYADREKGADSDSEDERKRRKMKAFGKARAPEKRN 1061
GK W+ELE EA ADRE + E ++RK G++ AP R+
Sbjct: 1030 GKDWDELEEEARKADRESQYEEVEETSNRKRK----GRSSAPPPRS 1071
Score = 63 (27.2 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 26/93 (27%), Positives = 42/93 (45%)
Query: 450 SSKAVKDVAYSFNEDDEEEEQPKVKAEVKGG-EPTLSKATLRSDHQEMSK-----EELRR 503
S ++D ++ + D+EEEE+ + E + A+L S+ +E K EE R
Sbjct: 983 SESEIEDETFNPSADEEEEEEEDSDEDYSSETEDSDYSASLGSE-EESGKDWDELEEEAR 1041
Query: 504 QHQAELARQKNEETARRLAGGGSSTADNRGSVK 536
+ E ++ EET+ R G SS R K
Sbjct: 1042 KADRESQYEEVEETSNRKRKGRSSAPPPRSKKK 1074
Score = 55 (24.4 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 760 KDVQFYIEVMDVVQTLGGGKRSAYDPDEVEEEQRERARKNK 800
+D E D +LG + S D DE+EEE R+ R+++
Sbjct: 1008 EDYSSETEDSDYSASLGSEEESGKDWDELEEEARKADRESQ 1048
Score = 41 (19.5 bits), Expect = 6.3e-179, Sum P(3) = 6.3e-179
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 1019 WEELEREASYADREKGADSDSEDE 1042
W L+ E+ + E+ ++S+ EDE
Sbjct: 967 WSFLDPESEGSGGEEDSESEIEDE 990
>UNIPROTKB|E1BNP8 [details] [associations]
symbol:SUPT16H "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0009987 "cellular process" evidence=IEA]
InterPro:IPR000994 Pfam:PF00557 Gene3D:3.90.230.10 SUPFAM:SSF55920
GO:GO:0009987 InterPro:IPR013719 Pfam:PF08512 CTD:11198 OMA:MEIIDAD
InterPro:IPR013953 Pfam:PF08644 GeneTree:ENSGT00390000014495
EMBL:DAAA02028315 IPI:IPI00696830 RefSeq:NP_001179321.1
UniGene:Bt.2157 PRIDE:E1BNP8 Ensembl:ENSBTAT00000027214
GeneID:514989 KEGG:bta:514989 NextBio:20871607 Uniprot:E1BNP8
Length = 1047
Score = 1658 (588.7 bits), Expect = 1.5e-177, Sum P(2) = 1.5e-177
Identities = 365/954 (38%), Positives = 565/954 (59%)
Query: 26 AINLDN--FSKRLKMLYSHWTEHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGY 83
A+ LD + +R+K LYS+W + D + + +A+ V+ V E++ Y KS+AL WL GY
Sbjct: 2 AVTLDKDAYYRRVKRLYSNWRK-GEDEYANVDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 84 EFPETIMVFLKKQIHFLCSQKKASLLEVIK--KSAKEAVGIEVV-IHVKGKTDDGSGLMD 140
E +TIMVF +I F+ S+KK L+ I K + A G + + V+ K + D
Sbjct: 60 ELTDTIMVFCDDKIIFMASKKKVEFLKQIANTKGNENANGAPAITLLVREKNESNKSSFD 119
Query: 141 KIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKLKKANFALSDVSNGFSDLFAI 200
K+ A+ + SK+G + +G S++ G+ +++WN+ L K F D+S + A+
Sbjct: 120 KMIEAIKE-SKNGKK----IGVFSKDKFPGEFMKSWNDCLNKEGFDKIDISAVVAYTIAV 174
Query: 201 KDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILEPARIKVK 260
K+D EL +KKAA ++S V +F ++ +++D ++KV HS L + EKAI E +
Sbjct: 175 KEDGELNLMKKAASITSEVFNKFFKERVMEIVDADEKVRHSKLAESVEKAI-EEKKYLAG 233
Query: 261 LKAENVDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCSNVARTF 320
V++CYPPI QSGG ++LK S S+ N++++ + I CA+G R+ SYCSN+ RT
Sbjct: 234 ADPSTVEMCYPPIIQSGGNYNLKFSVVSDKNHMHFGA---ITCAMGIRFKSYCSNLVRTL 290
Query: 321 LIDANTVQSKAYEVLLKAHEAAISALKSGNKVSAAYKAASTVVEKDAPELAANLTRNAGT 380
++D + + Y LL+ E + L+ G K+ Y A VV+K PEL +T+N G
Sbjct: 291 MVDPSQEVQENYNFLLQLQEELLKELRHGVKICDVYNAVMDVVKKQKPELLNKITKNLGF 350
Query: 381 GIGLEFRESGLSLNAKNDRILKAGMVFNVSLGFQNLQT-ENKNPKTQKFSVLLADTVIVG 439
G+G+EFRE L +N+KN LK GMVF+++LGF +L E K P+ + +++ + DTV+V
Sbjct: 351 GMGIEFREGSLVINSKNQYKLKKGMVFSINLGFSDLTNKEGKKPEEKTYALFIGDTVLVD 410
Query: 440 EKVPDIVTSKSSKAVKDVA-YSFNEDDEEEEQPKVKAEVKGGEPTLSKATLRSDHQEMSK 498
E P V + K VK+V + NED+EEEE+ K +AE G + + EM+
Sbjct: 411 EDGPATVLTSVKKKVKNVGIFLKNEDEEEEEEEKDEAEDLLGRGSRAALLTERTRNEMTA 470
Query: 499 EELRRQHQAELARQKNEETARRLAGGGSSTADNRGSVKTIGDLVAYKNVNDLPP-P--RD 555
EE RR HQ ELA Q NEE RRL + + K V+YKN + +P P R+
Sbjct: 471 EEKRRAHQKELAAQLNEEAKRRL----TEQKGEQQIQKARKSNVSYKNPSLMPKEPHIRE 526
Query: 556 LMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRSCYIRIIFNVPGTSFTPHDSN 615
+ I +D+K E +++P++G PFH+AT+K++S + + + Y+RI F PG++ ++ N
Sbjct: 527 MKIYIDKKYETVIMPVFGIATPFHIATIKNISMSVEGDYT-YLRINFYCPGSALGRNEGN 585
Query: 616 SLKFQGSIYLKEVSLRSKDSR----------HISEVVQQIKTLRRQVTSRESERAERATL 665
+ ++KE++ R+ + + ++ + IK ++++ +RE+E E+ +
Sbjct: 586 IFPNPEATFVKEITYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGI 645
Query: 666 VTQEKLQLASAKFKPLKLFDLWIRPPFGGRGRKLTGSLEAHTNGFRYSTSRPDERVDVMY 725
V Q+ L + + P KL DL+IRP + ++ GSLEAH NGFR+++ R D +VD++Y
Sbjct: 646 VKQDSLVINLNRSNP-KLKDLYIRPNIAQK--RMQGSLEAHVNGFRFTSVRGD-KVDILY 701
Query: 726 GNIKHAFFQPAEREMITLLHFHLHNHIMVGNKKTKDVQFYIEVMDVVQTLGGGKRSAYDP 785
NIKHA FQP + EMI +LHFHL N IM G K+ DVQFY EV ++ LG + +D
Sbjct: 702 NNIKHALFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHM-HDR 760
Query: 786 DEVEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFHGVPHKAS 845
D++ EQ ER ++K+ F+NF+ +V L + +LEF+ P R+LGF+G P++++
Sbjct: 761 DDLYAEQMEREMRHKLKTAFKNFIEKVEALTKE------ELEFEVPFRDLGFNGAPYRST 814
Query: 846 AFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSI 905
+ PTSS LV E P V+TL E+E+++ ERV KNFDM IV+KD+ + V I++I
Sbjct: 815 CLLQPTSSALVNATEWPPFVVTLDEVELIHFERVQFHLKNFDMVIVYKDYSKKVTMINAI 874
Query: 906 PSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNME 959
P +SLD IKEWL++ DLKY E +LNW I+KTI DDPE F E GGW FL E
Sbjct: 875 PVASLDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSFLEPE 928
Score = 88 (36.0 bits), Expect = 1.5e-177, Sum P(2) = 1.5e-177
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 1016 GKTWEELEREASYADREKGADSDSEDER---KRRKMKAFGKARAPEKRNPGGSLPKRAK 1071
GK W+ELE EA ADRE + + E R ++RK R + + S P + K
Sbjct: 987 GKDWDELEEEARKADRESRYEEEEEQSRSMSRKRKASVHSSGRGSNRGSRHSSAPPKKK 1045
Score = 49 (22.3 bits), Expect = 2.0e-173, Sum P(2) = 2.0e-173
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 1019 WEELEREASYADREKGADSDSEDE 1042
W LE E +D E+G DS+SE E
Sbjct: 922 WSFLEPEGEGSDAEEG-DSESEIE 944
Score = 45 (20.9 bits), Expect = 5.3e-173, Sum P(2) = 5.3e-173
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 1021 ELEREASYADREKGADSDSEDERKRRKMKAFGKARAPEKRNPGGSLPKRAK 1071
+ +E+ ++ E G D D +E R KA ++R E+ S+ ++ K
Sbjct: 974 DYSKESLGSEEESGKDWDELEEEAR---KADRESRYEEEEEQSRSMSRKRK 1021
>UNIPROTKB|E2REU7 [details] [associations]
symbol:SUPT16H "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0009987 "cellular process"
evidence=IEA] InterPro:IPR000994 Pfam:PF00557 Gene3D:3.90.230.10
SUPFAM:SSF55920 GO:GO:0009987 InterPro:IPR013719 Pfam:PF08512
CTD:11198 OMA:MEIIDAD InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 EMBL:AAEX03009852 RefSeq:XP_851566.1
Ensembl:ENSCAFT00000009018 GeneID:612874 KEGG:cfa:612874
NextBio:20898360 Uniprot:E2REU7
Length = 1047
Score = 1656 (588.0 bits), Expect = 2.4e-177, Sum P(2) = 2.4e-177
Identities = 364/954 (38%), Positives = 564/954 (59%)
Query: 26 AINLDN--FSKRLKMLYSHWTEHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGY 83
A+ LD + +R+K LYS+W + D + + +A+ V+ V E++ Y KS+AL WL GY
Sbjct: 2 AVTLDKDAYYRRVKRLYSNWRK-GEDEYANVDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 84 EFPETIMVFLKKQIHFLCSQKKASLLEVIK--KSAKEAVGIEVV-IHVKGKTDDGSGLMD 140
E +TIMVF +I F+ S+KK L+ I K + A G + + ++ K + D
Sbjct: 60 ELTDTIMVFCDDKIIFMASKKKVEFLKQIANTKGNENANGAPAITLLIREKNESNKSSFD 119
Query: 141 KIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKLKKANFALSDVSNGFSDLFAI 200
K+ A+ + SK+G + +G S++ G+ ++ WN+ L K F D+S + A+
Sbjct: 120 KMIEAIKE-SKNGKK----IGVFSKDKFPGEFMKNWNDCLNKEGFDKIDISAVVAYTIAV 174
Query: 201 KDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILEPARIKVK 260
K+D EL +KKAA ++S V +F ++ +++D ++KV HS L + EKAI E +
Sbjct: 175 KEDGELNLMKKAASITSEVFNKFFKERVMEIVDADEKVRHSKLAESVEKAI-EEKKYLAG 233
Query: 261 LKAENVDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCSNVARTF 320
V++CYPPI QSGG ++LK S S+ N++++ + I CA+G R+ SYCSN+ RT
Sbjct: 234 ADPSTVEMCYPPIIQSGGNYNLKFSVVSDKNHMHFGA---ITCAMGIRFKSYCSNLVRTL 290
Query: 321 LIDANTVQSKAYEVLLKAHEAAISALKSGNKVSAAYKAASTVVEKDAPELAANLTRNAGT 380
++D + + Y LL+ E + L+ G K+ Y A VV+K PEL +T+N G
Sbjct: 291 MVDPSQEVQENYNFLLQLQEELLKELRHGVKICDVYNAVMDVVKKQKPELLNKITKNLGF 350
Query: 381 GIGLEFRESGLSLNAKNDRILKAGMVFNVSLGFQNLQT-ENKNPKTQKFSVLLADTVIVG 439
G+G+EFRE L +N+KN LK GMVF+++LGF +L E K P+ + +++ + DTV+V
Sbjct: 351 GMGIEFREGSLVINSKNQYKLKKGMVFSINLGFSDLTNKEGKKPEEKTYALFIGDTVLVD 410
Query: 440 EKVPDIVTSKSSKAVKDVA-YSFNEDDEEEEQPKVKAEVKGGEPTLSKATLRSDHQEMSK 498
E P V + K VK+V + NED+EEEE+ K +AE G + + EM+
Sbjct: 411 EDGPATVLTSVKKKVKNVGIFLKNEDEEEEEEEKDEAEDLLGRGSRAALLTERTRNEMTA 470
Query: 499 EELRRQHQAELARQKNEETARRLAGGGSSTADNRGSVKTIGDLVAYKNVNDLPP-P--RD 555
EE RR HQ ELA Q NEE RRL + + K V+YKN + +P P R+
Sbjct: 471 EEKRRAHQKELAAQLNEEAKRRL----TEQKGEQQIQKARKSNVSYKNPSLMPKEPHIRE 526
Query: 556 LMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRSCYIRIIFNVPGTSFTPHDSN 615
+ I +D+K E +++P++G PFH+AT+K++S + + + Y+RI F PG++ ++ N
Sbjct: 527 MKIYIDKKYETVIMPVFGIATPFHIATIKNISMSVEGDYT-YLRINFYCPGSALGRNEGN 585
Query: 616 SLKFQGSIYLKEVSLRSKDSR----------HISEVVQQIKTLRRQVTSRESERAERATL 665
+ ++KE++ R+ + + ++ + IK ++++ +RE+E E+ +
Sbjct: 586 IFPNPEATFVKEITYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGI 645
Query: 666 VTQEKLQLASAKFKPLKLFDLWIRPPFGGRGRKLTGSLEAHTNGFRYSTSRPDERVDVMY 725
V Q+ L + + P KL DL+IRP + ++ GSLEAH NGFR+++ R D +VD++Y
Sbjct: 646 VKQDSLVINLNRSNP-KLKDLYIRPNIAQK--RMQGSLEAHVNGFRFTSVRGD-KVDILY 701
Query: 726 GNIKHAFFQPAEREMITLLHFHLHNHIMVGNKKTKDVQFYIEVMDVVQTLGGGKRSAYDP 785
NIKHA FQP + EMI +LHFHL N IM G K+ DVQFY EV ++ LG + +D
Sbjct: 702 NNIKHALFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHM-HDR 760
Query: 786 DEVEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFHGVPHKAS 845
D++ EQ ER ++K+ F+NF+ +V L + +LEF+ P R+LGF+G P++++
Sbjct: 761 DDLYAEQMEREMRHKLKTAFKNFIEKVEALTKE------ELEFEVPFRDLGFNGAPYRST 814
Query: 846 AFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSI 905
+ PTSS LV E P V+TL E+E+++ ERV KNFDM IV+KD+ + V I++I
Sbjct: 815 CLLQPTSSALVNATEWPPFVVTLDEVELIHFERVQFHLKNFDMVIVYKDYSKKVTMINAI 874
Query: 906 PSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNME 959
P +SLD IKEWL++ DLKY E +LNW I+KTI DDPE F E GGW FL E
Sbjct: 875 PVASLDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSFLEPE 928
Score = 88 (36.0 bits), Expect = 2.4e-177, Sum P(2) = 2.4e-177
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 1016 GKTWEELEREASYADREKGADSDSEDER---KRRKMKAFGKARAPEKRNPGGSLPKRAK 1071
GK W+ELE EA ADRE + + E R ++RK R + + S P + K
Sbjct: 987 GKDWDELEEEARKADRESRYEEEEEQSRSMSRKRKASVHSSGRGSNRGSRHSSAPPKKK 1045
Score = 49 (22.3 bits), Expect = 3.2e-173, Sum P(2) = 3.2e-173
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 1019 WEELEREASYADREKGADSDSEDE 1042
W LE E +D E+G DS+SE E
Sbjct: 922 WSFLEPEGEGSDAEEG-DSESEIE 944
Score = 45 (20.9 bits), Expect = 8.6e-173, Sum P(2) = 8.6e-173
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 1021 ELEREASYADREKGADSDSEDERKRRKMKAFGKARAPEKRNPGGSLPKRAK 1071
+ +E+ ++ E G D D +E R KA ++R E+ S+ ++ K
Sbjct: 974 DYSKESLGSEEESGKDWDELEEEAR---KADRESRYEEEEEQSRSMSRKRK 1021
>UNIPROTKB|Q9Y5B9 [details] [associations]
symbol:SUPT16H "FACT complex subunit SPT16" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=TAS]
[GO:0032786 "positive regulation of DNA-dependent transcription,
elongation" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0050434 "positive regulation of viral transcription"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000994 Pfam:PF00557
Reactome:REACT_116125 GO:GO:0005694 GO:GO:0005654 GO:GO:0016032
GO:GO:0006260 GO:GO:0006281 GO:GO:0006368 Gene3D:3.90.230.10
SUPFAM:SSF55920 GO:GO:0006337 Reactome:REACT_1788 GO:GO:0050434
Reactome:REACT_1892 GO:GO:0032786 InterPro:IPR013719 Pfam:PF08512
EMBL:AF152961 EMBL:BC000565 EMBL:BC014046 EMBL:BC064561
EMBL:BC073849 EMBL:AF164924 IPI:IPI00026970 RefSeq:NP_009123.1
UniGene:Hs.213724 ProteinModelPortal:Q9Y5B9 SMR:Q9Y5B9
DIP:DIP-42757N IntAct:Q9Y5B9 MINT:MINT-2823866 STRING:Q9Y5B9
MEROPS:M24.974 PhosphoSite:Q9Y5B9 DMDM:74753511 PaxDb:Q9Y5B9
PeptideAtlas:Q9Y5B9 PRIDE:Q9Y5B9 Ensembl:ENST00000216297
GeneID:11198 KEGG:hsa:11198 UCSC:uc001wao.2 CTD:11198
GeneCards:GC14M021819 HGNC:HGNC:11465 HPA:CAB022551 MIM:605012
neXtProt:NX_Q9Y5B9 PharmGKB:PA36251 eggNOG:COG5406
HOGENOM:HOG000209079 HOVERGEN:HBG092544 InParanoid:Q9Y5B9
OMA:MEIIDAD OrthoDB:EOG40K7Z3 PhylomeDB:Q9Y5B9 ChiTaRS:SUPT16H
GenomeRNAi:11198 NextBio:42621 ArrayExpress:Q9Y5B9 Bgee:Q9Y5B9
CleanEx:HS_SUPT16H Genevestigator:Q9Y5B9 GermOnline:ENSG00000092201
InterPro:IPR013953 Pfam:PF08644 Uniprot:Q9Y5B9
Length = 1047
Score = 1656 (588.0 bits), Expect = 2.4e-177, Sum P(2) = 2.4e-177
Identities = 364/954 (38%), Positives = 565/954 (59%)
Query: 26 AINLDN--FSKRLKMLYSHWTEHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGY 83
A+ LD + +R+K LYS+W + D + + +A+ V+ V E++ Y KS+AL WL GY
Sbjct: 2 AVTLDKDAYYRRVKRLYSNWRK-GEDEYANVDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 84 EFPETIMVFLKKQIHFLCSQKKASLLEVIK--KSAKEAVGIEVV-IHVKGKTDDGSGLMD 140
E +TIMVF +I F+ S+KK L+ I K + A G + + ++ K + D
Sbjct: 60 ELTDTIMVFCDDKIIFMASKKKVEFLKQIANTKGNENANGAPAITLLIREKNESNKSSFD 119
Query: 141 KIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKLKKANFALSDVSNGFSDLFAI 200
K+ A+ + SK+G + +G S++ G+ +++WN+ L K F D+S + A+
Sbjct: 120 KMIEAIKE-SKNGKK----IGVFSKDKFPGEFMKSWNDCLNKEGFDKIDISAVVAYTIAV 174
Query: 201 KDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILEPARIKVK 260
K+D EL +KKAA ++S V +F ++ +++D ++KV HS L + EKAI E +
Sbjct: 175 KEDGELNLMKKAASITSEVFNKFFKERVMEIVDADEKVRHSKLAESVEKAI-EEKKYLAG 233
Query: 261 LKAENVDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCSNVARTF 320
V++CYPPI QSGG ++LK S S+ N++++ + I CA+G R+ SYCSN+ RT
Sbjct: 234 ADPSTVEMCYPPIIQSGGNYNLKFSVVSDKNHMHFGA---ITCAMGIRFKSYCSNLVRTL 290
Query: 321 LIDANTVQSKAYEVLLKAHEAAISALKSGNKVSAAYKAASTVVEKDAPELAANLTRNAGT 380
++D + + Y LL+ E + L+ G K+ Y A VV+K PEL +T+N G
Sbjct: 291 MVDPSQEVQENYNFLLQLQEELLKELRHGVKICDVYNAVMDVVKKQKPELLNKITKNLGF 350
Query: 381 GIGLEFRESGLSLNAKNDRILKAGMVFNVSLGFQNLQT-ENKNPKTQKFSVLLADTVIVG 439
G+G+EFRE L +N+KN LK GMVF+++LGF +L E K P+ + +++ + DTV+V
Sbjct: 351 GMGIEFREGSLVINSKNQYKLKKGMVFSINLGFSDLTNKEGKKPEEKTYALFIGDTVLVD 410
Query: 440 EKVPDIVTSKSSKAVKDVA-YSFNEDDEEEEQPKVKAEVKGGEPTLSKATLRSDHQEMSK 498
E P V + K VK+V + NED+EEEE+ K +AE G + + EM+
Sbjct: 411 EDGPATVLTSVKKKVKNVGIFLKNEDEEEEEEEKDEAEDLLGRGSRAALLTERTRNEMTA 470
Query: 499 EELRRQHQAELARQKNEETARRLAGGGSSTADNRGSVKTIGDLVAYKNVNDLPP-P--RD 555
EE RR HQ ELA Q NEE RRL + + K V+YKN + +P P R+
Sbjct: 471 EEKRRAHQKELAAQLNEEAKRRL----TEQKGEQQIQKARKSNVSYKNPSLMPKEPHIRE 526
Query: 556 LMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRSCYIRIIFNVPGTSFTPHDSN 615
+ I +D+K E +++P++G PFH+AT+K++S + + + Y+RI F PG++ ++ N
Sbjct: 527 MKIYIDKKYETVIMPVFGIATPFHIATIKNISMSVEGDYT-YLRINFYCPGSALGRNEGN 585
Query: 616 SLKFQGSIYLKEVSLRSKDSR----------HISEVVQQIKTLRRQVTSRESERAERATL 665
+ ++KE++ R+ + + ++ + IK ++++ +RE+E E+ +
Sbjct: 586 IFPNPEATFVKEITYRASNIKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGI 645
Query: 666 VTQEKLQLASAKFKPLKLFDLWIRPPFGGRGRKLTGSLEAHTNGFRYSTSRPDERVDVMY 725
V Q+ L + + P KL DL+IRP + ++ GSLEAH NGFR+++ R D +VD++Y
Sbjct: 646 VKQDSLVINLNRSNP-KLKDLYIRPNIAQK--RMQGSLEAHVNGFRFTSVRGD-KVDILY 701
Query: 726 GNIKHAFFQPAEREMITLLHFHLHNHIMVGNKKTKDVQFYIEVMDVVQTLGGGKRSAYDP 785
NIKHA FQP + EMI +LHFHL N IM G K+ DVQFY EV ++ LG + +D
Sbjct: 702 NNIKHALFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHM-HDR 760
Query: 786 DEVEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFHGVPHKAS 845
D++ EQ ER ++K+ F+NF+ +V L + +LEF+ P R+LGF+G P++++
Sbjct: 761 DDLYAEQMEREMRHKLKTAFKNFIEKVEALTKE------ELEFEVPFRDLGFNGAPYRST 814
Query: 846 AFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSI 905
+ PTSS LV E P V+TL E+E+++ ERV KNFDM IV+KD+ + V I++I
Sbjct: 815 CLLQPTSSALVNATEWPPFVVTLDEVELIHFERVQFHLKNFDMVIVYKDYSKKVTMINAI 874
Query: 906 PSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNME 959
P +SLD IKEWL++ DLKY E +LNW I+KTI DDPE F E GGW FL E
Sbjct: 875 PVASLDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSFLEPE 928
Score = 88 (36.0 bits), Expect = 2.4e-177, Sum P(2) = 2.4e-177
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 1016 GKTWEELEREASYADREKGADSDSEDER---KRRKMKAFGKARAPEKRNPGGSLPKRAK 1071
GK W+ELE EA ADRE + + E R ++RK R + + S P + K
Sbjct: 987 GKDWDELEEEARKADRESRYEEEEEQSRSMSRKRKASVHSSGRGSNRGSRHSSAPPKKK 1045
Score = 49 (22.3 bits), Expect = 3.2e-173, Sum P(2) = 3.2e-173
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 1019 WEELEREASYADREKGADSDSEDE 1042
W LE E +D E+G DS+SE E
Sbjct: 922 WSFLEPEGEGSDAEEG-DSESEIE 944
Score = 45 (20.9 bits), Expect = 8.6e-173, Sum P(2) = 8.6e-173
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 1021 ELEREASYADREKGADSDSEDERKRRKMKAFGKARAPEKRNPGGSLPKRAK 1071
+ +E+ ++ E G D D +E R KA ++R E+ S+ ++ K
Sbjct: 974 DYSKESLGSEEESGKDWDELEEEAR---KADRESRYEEEEEQSRSMSRKRK 1021
>MGI|MGI:1890948 [details] [associations]
symbol:Supt16 "suppressor of Ty 16" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0009987 "cellular process" evidence=IEA] InterPro:IPR000994
Pfam:PF00557 MGI:MGI:1890948 GO:GO:0005634 GO:GO:0005694
GO:GO:0006355 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
Gene3D:3.90.230.10 SUPFAM:SSF55920 InterPro:IPR013719 Pfam:PF08512
UniGene:Mm.21662 MEROPS:M24.974 eggNOG:COG5406 HOGENOM:HOG000209079
HOVERGEN:HBG092544 OrthoDB:EOG40K7Z3 InterPro:IPR013953
Pfam:PF08644 EMBL:AF323667 EMBL:AK148506 EMBL:AK158116
EMBL:BC012433 IPI:IPI00120344 RefSeq:NP_291096.2 UniGene:Mm.489682
ProteinModelPortal:Q920B9 SMR:Q920B9 DIP:DIP-55972N IntAct:Q920B9
STRING:Q920B9 PhosphoSite:Q920B9 PaxDb:Q920B9 PRIDE:Q920B9
GeneID:114741 KEGG:mmu:114741 UCSC:uc007tor.1 CTD:114741
InParanoid:Q920B9 NextBio:368789 CleanEx:MM_SUPT16H
Genevestigator:Q920B9 GermOnline:ENSMUSG00000035726 Uniprot:Q920B9
Length = 1047
Score = 1654 (587.3 bits), Expect = 4.0e-177, Sum P(2) = 4.0e-177
Identities = 363/954 (38%), Positives = 563/954 (59%)
Query: 26 AINLDN--FSKRLKMLYSHWTEHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGY 83
A+ LD + +R+K LYS+W + D + +A+ V+ V E++ Y KS+AL WL GY
Sbjct: 2 AVTLDKDAYYRRVKRLYSNWRK-GEDEYASIDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 84 EFPETIMVFLKKQIHFLCSQKKASLLEVIK--KSAKEAVGIEVV-IHVKGKTDDGSGLMD 140
E +TIMVF +I F+ S+KK L+ I K + A G + + V+ K + D
Sbjct: 60 ELTDTIMVFCDDKIIFMASKKKVEFLKQIANTKGNENANGAPAITLLVREKNESNKSSFD 119
Query: 141 KIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKLKKANFALSDVSNGFSDLFAI 200
K+ A+ + SKSG + +G S++ G+ +++W++ L K F D+S + A+
Sbjct: 120 KMIDAIKE-SKSGKK----IGVFSKDKFPGEFMKSWSDCLNKEGFDKVDISAVVAYTIAV 174
Query: 201 KDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILEPARIKVK 260
K+D EL +KKAA ++S V +F ++ +++D ++KV HS L + EKAI E +
Sbjct: 175 KEDGELNLMKKAASITSEVFNKFFKERVMEIVDADEKVRHSKLAESVEKAI-EEKKYLAG 233
Query: 261 LKAENVDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCSNVARTF 320
V++CYPPI QSGG ++LK S S+ N++++ + I CA+G R+ SYCSN+ RT
Sbjct: 234 ADPSTVEMCYPPIIQSGGNYNLKFSVVSDKNHMHFGA---ITCAMGIRFKSYCSNLVRTL 290
Query: 321 LIDANTVQSKAYEVLLKAHEAAISALKSGNKVSAAYKAASTVVEKDAPELAANLTRNAGT 380
++D + Y LL+ E + L+ G K+ Y + VV+K PEL +T+N G
Sbjct: 291 MVDPTQEVQENYNFLLQLQEELLKELRHGVKICDVYNSVMDVVKKQKPELLNKITKNLGF 350
Query: 381 GIGLEFRESGLSLNAKNDRILKAGMVFNVSLGFQNLQT-ENKNPKTQKFSVLLADTVIVG 439
G+G+EFRE L +N+KN LK GMVF+++LGF +L E K P+ + +++ + DTV+V
Sbjct: 351 GMGIEFREGSLVINSKNQYKLKKGMVFSINLGFSDLTNKEGKKPEEKTYALFIGDTVLVD 410
Query: 440 EKVPDIVTSKSSKAVKDVA-YSFNEDDEEEEQPKVKAEVKGGEPTLSKATLRSDHQEMSK 498
E P + + K VK+V + NEDDEEEE+ K +AE G + + EM+
Sbjct: 411 EDGPATILTSVKKKVKNVGIFLKNEDDEEEEEEKDEAEDLLGRGSRAALLTERTRNEMTA 470
Query: 499 EELRRQHQAELARQKNEETARRLAGGGSSTADNRGSVKTIGDLVAYKNVNDLPP-P--RD 555
EE RR HQ ELA Q NEE RRL + + K V+YKN + +P P R+
Sbjct: 471 EEKRRAHQKELAAQLNEEAKRRL----TEQKGEQQIQKARKSNVSYKNPSLMPKEPHIRE 526
Query: 556 LMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRSCYIRIIFNVPGTSFTPHDSN 615
+ I +D+K E +++P++G PFH+AT+K++S + + + Y+RI F PG++ ++ N
Sbjct: 527 MKIYIDKKYETVIMPVFGIATPFHIATIKNISMSVEGDYT-YLRINFYCPGSALGRNEGN 585
Query: 616 SLKFQGSIYLKEVSLRSKDSR----------HISEVVQQIKTLRRQVTSRESERAERATL 665
+ ++KE++ R+ + + ++ + IK ++++ +RE+E E+ +
Sbjct: 586 IFPNPEATFVKEITYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGI 645
Query: 666 VTQEKLQLASAKFKPLKLFDLWIRPPFGGRGRKLTGSLEAHTNGFRYSTSRPDERVDVMY 725
V Q+ L + + P KL DL+IRP + ++ GSLEAH NGFR+++ R D +VD++Y
Sbjct: 646 VKQDSLVINLNRSNP-KLKDLYIRPNIAQK--RMQGSLEAHVNGFRFTSVRGD-KVDILY 701
Query: 726 GNIKHAFFQPAEREMITLLHFHLHNHIMVGNKKTKDVQFYIEVMDVVQTLGGGKRSAYDP 785
NIKHA FQP + EMI +LHFHL N +M G K+ DVQFY EV ++ LG + +D
Sbjct: 702 NNIKHALFQPCDGEMIIVLHFHLKNAVMFGKKRHTDVQFYTEVGEITTDLGKHQHM-HDR 760
Query: 786 DEVEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFHGVPHKAS 845
D++ EQ ER ++K+ F+NF+ +V L + +LEF+ P R+LGF+G P++++
Sbjct: 761 DDLYAEQMEREMRHKLKTAFKNFIEKVEALTKE------ELEFEVPFRDLGFNGAPYRST 814
Query: 846 AFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSI 905
+ PTSS LV E P V+TL E+E+++ ERV KNFDM IV+KD+ + V I++I
Sbjct: 815 CLLQPTSSALVNATEWPPFVVTLDEVELIHFERVQFHLKNFDMVIVYKDYSKKVTMINAI 874
Query: 906 PSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNME 959
P +SLD IKEWL++ DLKY E +LNW I+KTI DDPE F E GGW FL E
Sbjct: 875 PVASLDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSFLEPE 928
Score = 88 (36.0 bits), Expect = 4.0e-177, Sum P(2) = 4.0e-177
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 1016 GKTWEELEREASYADREKGADSDSEDER---KRRKMKAFGKARAPEKRNPGGSLPKRAK 1071
GK W+ELE EA ADRE + + E R ++RK R + + S P + K
Sbjct: 987 GKDWDELEEEARKADRESRYEEEEEQSRSMSRKRKASVHSSGRGSNRGSRHSSAPPKKK 1045
Score = 45 (20.9 bits), Expect = 1.4e-172, Sum P(2) = 1.4e-172
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 1021 ELEREASYADREKGADSDSEDERKRRKMKAFGKARAPEKRNPGGSLPKRAK 1071
+ +E+ ++ E G D D +E R KA ++R E+ S+ ++ K
Sbjct: 974 DYSKESLGSEEESGKDWDELEEEAR---KADRESRYEEEEEQSRSMSRKRK 1021
>UNIPROTKB|F1S8K5 [details] [associations]
symbol:SUPT16H "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009987 "cellular process" evidence=IEA]
InterPro:IPR000994 Pfam:PF00557 Gene3D:3.90.230.10 SUPFAM:SSF55920
GO:GO:0009987 InterPro:IPR013719 Pfam:PF08512 OMA:MEIIDAD
InterPro:IPR013953 Pfam:PF08644 GeneTree:ENSGT00390000014495
EMBL:CT797461 Ensembl:ENSSSCT00000031400 Uniprot:F1S8K5
Length = 1048
Score = 1652 (586.6 bits), Expect = 6.5e-177, Sum P(2) = 6.5e-177
Identities = 364/955 (38%), Positives = 566/955 (59%)
Query: 26 AINLDN--FSKRLKMLYSHWTEHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGY 83
A+ LD + +R+K LYS+W + D + + +A+ V+ V E++ Y KS+AL WL GY
Sbjct: 2 AVTLDKDAYYRRVKRLYSNWRK-GEDEYANVDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 84 EFPETIMVFLKKQIHFLCSQKKASLLEVIK--KSAKEAVGIEVV-IHVKGKTDDGSGLMD 140
E +TIMVF +I F+ S+KK L+ I K + A G + + ++ K + D
Sbjct: 60 ELTDTIMVFCDDKIIFMASKKKVEFLKQIANTKGNENANGAPAITLLIREKNESNKSSFD 119
Query: 141 KIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKLKKANFALSDVSNGFSDLFAI 200
K+ A+ + SK+G + +G S++ G+ +++WN+ L K F D+S + A+
Sbjct: 120 KMIEAIKE-SKNGKK----IGVFSKDKFPGEFMKSWNDCLNKEGFDKIDISAVVAYTIAV 174
Query: 201 KDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILEPARIKVK 260
K+D EL +KKAA ++S V +F ++ +++D ++KV HS L + EKAI E +
Sbjct: 175 KEDGELNLMKKAASITSEVFNKFFKERVMEIVDADEKVRHSKLAESVEKAI-EEKKYLAG 233
Query: 261 LKAENVDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCSNVARTF 320
V++CYPPI QSGG ++LK S S+ N++++ + I CA+G R+ SYCSN+ RT
Sbjct: 234 ADPSTVEMCYPPIIQSGGNYNLKFSVVSDKNHMHFGA---ITCAMGIRFKSYCSNLVRTL 290
Query: 321 LIDANTVQSKAYEVLLKAHEAAISALKSGNKVSAAYKAASTVVEKDAPELAANLTRNAGT 380
++D + + Y LL+ E + L+ G K+ Y A VV+K PEL +T+N G
Sbjct: 291 MVDPSQEVQENYNFLLQLQEELLKELRHGVKICDVYNAVMDVVKKQKPELLNKITKNLGF 350
Query: 381 GIGLEFRESGLSLNAKNDRILKAGMVFNVSLGFQNLQT-ENKNPKTQKFSVLLADTVIVG 439
G+G+EFRE L +N+KN LK GMVF+++LGF +L E K P+ + +++ + DTV+V
Sbjct: 351 GMGIEFREGSLVINSKNQYKLKKGMVFSINLGFSDLTNKEGKKPEEKTYALFIGDTVLVD 410
Query: 440 EKVPDIVTSKSSKAVKDVA-YSFNEDDEEEEQPKVKAEVKGGEPTLSKATLRSDHQEMSK 498
E P V + K VK+V + NED+EEEE+ K +AE G + + EM+
Sbjct: 411 EDGPATVLTSVKKKVKNVGIFLKNEDEEEEEEEKDEAEDLLGRGSRAALLTERTRNEMTA 470
Query: 499 EELRRQHQAELARQKNEETARRLAGGGSSTADNRGSVKTIGDLVAYKNVNDLPP-P--RD 555
EE RR HQ ELA Q NEE RRL + + K V+YKN + +P P R+
Sbjct: 471 EEKRRAHQKELAAQLNEEAKRRL----TEQKGEQQIQKARKSNVSYKNPSLMPKEPHIRE 526
Query: 556 LMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRSCYIRIIFNVPGTSFTPHDSN 615
+ I +D+K E +++P++G PFH+AT+K++S + + + Y+RI F PG++ ++ N
Sbjct: 527 MKIYIDKKYETVIMPVFGIATPFHIATIKNISMSVEGDYT-YLRINFYCPGSALGRNEGN 585
Query: 616 SLKFQGSIYLKEVSLRSKDSR----------HISEVVQQIKTLRRQVTSRESERAERATL 665
+ ++KE++ R+ + + ++ + IK ++++ +RE+E E+ +
Sbjct: 586 IFPNPEATFVKEITYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGI 645
Query: 666 VTQEKLQLASAKFKPLKLFDLWIRPPFGGRGRKLTGSLEAHTNGFRYSTSRPDERVDVMY 725
V Q+ L + + P KL DL+IRP + ++ GSLEAH NGFR+++ R D +VD++Y
Sbjct: 646 VKQDSLVINLNRSNP-KLKDLYIRPNIAQK--RMQGSLEAHVNGFRFTSVRGD-KVDILY 701
Query: 726 GNIKHAFFQPAEREMITLLHFHLHNHIMVGNKKTKDVQFYIEVMDVVQTLGGGKRSAYDP 785
NIKHA FQP + EMI +LHFHL N IM G K+ DVQFY EV ++ LG + +D
Sbjct: 702 NNIKHALFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHM-HDR 760
Query: 786 DEV-EEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFHGVPHKA 844
D++ E+Q ER ++K+ F+NF+ +V L + +LEF+ P R+LGF+G P+++
Sbjct: 761 DDLYAEQQMEREMRHKLKTAFKNFIEKVEALTKE------ELEFEVPFRDLGFNGAPYRS 814
Query: 845 SAFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDS 904
+ + PTSS LV E P V+TL E+E+++ ERV KNFDM IV+KD+ + V I++
Sbjct: 815 TCLLQPTSSALVNATEWPPFVVTLDEVELIHFERVQFHLKNFDMVIVYKDYSKKVTMINA 874
Query: 905 IPSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNME 959
IP +SLD IKEWL++ DLKY E +LNW I+KTI DDPE F E GGW FL E
Sbjct: 875 IPVASLDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSFLEPE 929
Score = 88 (36.0 bits), Expect = 6.5e-177, Sum P(2) = 6.5e-177
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 1016 GKTWEELEREASYADREKGADSDSEDER---KRRKMKAFGKARAPEKRNPGGSLPKRAK 1071
GK W+ELE EA ADRE + + E R ++RK R + + S P + K
Sbjct: 988 GKDWDELEEEARKADRESRYEEEEEQSRSMSRKRKASVHSSGRGSNRGSRHSSAPPKKK 1046
Score = 49 (22.3 bits), Expect = 8.6e-173, Sum P(2) = 8.6e-173
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 1019 WEELEREASYADREKGADSDSEDE 1042
W LE E +D E+G DS+SE E
Sbjct: 923 WSFLEPEGEGSDAEEG-DSESEIE 945
Score = 45 (20.9 bits), Expect = 2.3e-172, Sum P(2) = 2.3e-172
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 1021 ELEREASYADREKGADSDSEDERKRRKMKAFGKARAPEKRNPGGSLPKRAK 1071
+ +E+ ++ E G D D +E R KA ++R E+ S+ ++ K
Sbjct: 975 DYSKESLGSEEESGKDWDELEEEAR---KADRESRYEEEEEQSRSMSRKRK 1022
>RGD|1310032 [details] [associations]
symbol:Supt16h "suppressor of Ty 16 homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0009987 "cellular process"
evidence=IEA] InterPro:IPR000994 Pfam:PF00557 RGD:1310032
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987 EMBL:CH474040
InterPro:IPR013719 Pfam:PF08512 CTD:11198 OMA:MEIIDAD
OrthoDB:EOG40K7Z3 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 IPI:IPI00869870 RefSeq:NP_001100731.1
UniGene:Rn.93187 Ensembl:ENSRNOT00000016288 GeneID:305851
KEGG:rno:305851 UCSC:RGD:1310032 NextBio:655127 Uniprot:D4A4J0
Length = 1047
Score = 1652 (586.6 bits), Expect = 6.5e-177, Sum P(2) = 6.5e-177
Identities = 364/954 (38%), Positives = 563/954 (59%)
Query: 26 AINLDN--FSKRLKMLYSHWTEHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGY 83
A+ LD + +R+K LYS+W + D + +A+ V+ V E++ Y KS+AL WL GY
Sbjct: 2 AVTLDKDAYYRRVKRLYSNWRK-GEDEYASIDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 84 EFPETIMVFLKKQIHFLCSQKKASLLEVIK--KSAKEAVGIEVV-IHVKGKTDDGSGLMD 140
E +TIMVF +I F+ S+KK L+ I K + A G + + V+ K + D
Sbjct: 60 ELTDTIMVFCDDKIIFMASKKKVEFLKQIANTKGNENANGAPAITLLVREKNESNKSSFD 119
Query: 141 KIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKLKKANFALSDVSNGFSDLFAI 200
K+ A+ + SK+G + +G S++ G+ +++W++ L K F D+S + A+
Sbjct: 120 KMIEAIKE-SKNGKK----IGVFSKDKFPGEFMKSWSDCLNKEGFDKVDISAVVAYTIAV 174
Query: 201 KDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILEPARIKVK 260
K+D EL +KKAA ++S V +F ++ +++D ++KV HS L + EKAI E +
Sbjct: 175 KEDGELNLMKKAASITSEVFNKFFKERVMEIVDADEKVRHSKLAESVEKAI-EEKKYLAG 233
Query: 261 LKAENVDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCSNVARTF 320
V++CYPPI QSGG ++LK S S+ N++++ + I CA+G R+ SYCSN+ RT
Sbjct: 234 ADPSTVEMCYPPIIQSGGNYNLKFSVVSDKNHMHFGA---ITCAMGIRFKSYCSNLVRTL 290
Query: 321 LIDANTVQSKAYEVLLKAHEAAISALKSGNKVSAAYKAASTVVEKDAPELAANLTRNAGT 380
++D + Y LL+ E + L+ G K+ Y + VV+K PEL +T+N G
Sbjct: 291 MVDPTQEVQENYNFLLQLQEELLKELRHGVKICDVYNSVMDVVKKQKPELLNKITKNLGF 350
Query: 381 GIGLEFRESGLSLNAKNDRILKAGMVFNVSLGFQNLQT-ENKNPKTQKFSVLLADTVIVG 439
G+G+EFRE L +N+KN LK GMVF+++LGF +L E K P+ + +++ + DTV+V
Sbjct: 351 GMGIEFREGSLVINSKNQYKLKKGMVFSINLGFSDLTNKEGKKPEEKTYALFIGDTVLVD 410
Query: 440 EKVPDIVTSKSSKAVKDVA-YSFNEDDEEEEQPKVKAEVKGGEPTLSKATLRSDHQEMSK 498
E P V + K VK+V + NEDDEEEE+ K +AE G + + EM+
Sbjct: 411 EDGPATVLTSVKKKVKNVGIFLKNEDDEEEEEEKDEAEDLLGRGSRAALLTERTRNEMTA 470
Query: 499 EELRRQHQAELARQKNEETARRLAGGGSSTADNRGSVKTIGDLVAYKNVNDLPP-P--RD 555
EE RR HQ ELA Q NEE RRL + + K V+YKN + +P P R+
Sbjct: 471 EEKRRAHQKELAAQLNEEAKRRL----TEQKGEQQIQKARKSNVSYKNPSLMPKEPHIRE 526
Query: 556 LMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRSCYIRIIFNVPGTSFTPHDSN 615
+ I +D+K E +++P++G PFH+AT+K++S + + + Y+RI F PG++ ++ N
Sbjct: 527 MKIYIDKKYETVIMPVFGIATPFHIATIKNISMSVEGDYT-YLRINFYCPGSALGRNEGN 585
Query: 616 SLKFQGSIYLKEVSLRSKDSR----------HISEVVQQIKTLRRQVTSRESERAERATL 665
+ ++KE++ R+ + + ++ + IK ++++ +RE+E E+ +
Sbjct: 586 IFPNPEATFVKEITYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGI 645
Query: 666 VTQEKLQLASAKFKPLKLFDLWIRPPFGGRGRKLTGSLEAHTNGFRYSTSRPDERVDVMY 725
V Q+ L + + P KL DL+IRP + ++ GSLEAH NGFR+++ R D +VD++Y
Sbjct: 646 VKQDSLVINLNRSNP-KLKDLYIRPNIAQK--RMQGSLEAHVNGFRFTSVRGD-KVDILY 701
Query: 726 GNIKHAFFQPAEREMITLLHFHLHNHIMVGNKKTKDVQFYIEVMDVVQTLGGGKRSAYDP 785
NIKHA FQP + EMI +LHFHL N IM G K+ DVQFY EV ++ LG + +D
Sbjct: 702 NNIKHALFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHM-HDR 760
Query: 786 DEVEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFHGVPHKAS 845
D++ EQ ER ++K+ F+NF+ +V L + +LEF+ P R+LGF+G P++++
Sbjct: 761 DDLYAEQMEREMRHKLKTAFKNFIEKVEALTKE------ELEFEVPFRDLGFNGAPYRST 814
Query: 846 AFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSI 905
+ PTSS LV E P V+TL E+E+++ ERV KNFDM IV+KD+ + V I++I
Sbjct: 815 CLLQPTSSALVNATEWPPFVVTLDEVELIHFERVQFHLKNFDMVIVYKDYSKKVTMINAI 874
Query: 906 PSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNME 959
P +SLD IKEWL++ DLKY E +LNW I+KTI DDPE F E GGW FL E
Sbjct: 875 PVASLDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSFLEPE 928
Score = 88 (36.0 bits), Expect = 6.5e-177, Sum P(2) = 6.5e-177
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 1016 GKTWEELEREASYADREKGADSDSEDER---KRRKMKAFGKARAPEKRNPGGSLPKRAK 1071
GK W+ELE EA ADRE + + E R ++RK R + + S P + K
Sbjct: 987 GKDWDELEEEARKADRESRYEEEEEQSRSMSRKRKASVHSSGRGSNRGSRHSSAPPKKK 1045
Score = 45 (20.9 bits), Expect = 2.3e-172, Sum P(2) = 2.3e-172
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 1021 ELEREASYADREKGADSDSEDERKRRKMKAFGKARAPEKRNPGGSLPKRAK 1071
+ +E+ ++ E G D D +E R KA ++R E+ S+ ++ K
Sbjct: 974 DYSKESLGSEEESGKDWDELEEEAR---KADRESRYEEEEEQSRSMSRKRK 1021
>DICTYBASE|DDB_G0282677 [details] [associations]
symbol:spt16 "FACT complex subunit SPT16"
species:44689 "Dictyostelium discoideum" [GO:0009987 "cellular
process" evidence=IEA] [GO:0035101 "FACT complex" evidence=ISS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=ISS] [GO:0001672 "regulation of chromatin
assembly or disassembly" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000994 Pfam:PF00557
dictyBase:DDB_G0282677 GO:GO:0005694 GO:GO:0006355
EMBL:AAFI02000047 GenomeReviews:CM000152_GR GO:GO:0006260
GO:GO:0006281 GO:GO:0006368 Gene3D:3.90.230.10 SUPFAM:SSF55920
GO:GO:0001672 GO:GO:0035101 InterPro:IPR013719 Pfam:PF08512
eggNOG:COG5406 InterPro:IPR013953 Pfam:PF08644 OMA:GARYKNY
RefSeq:XP_640196.1 ProteinModelPortal:Q54S43 STRING:Q54S43
EnsemblProtists:DDB0231753 GeneID:8623736 KEGG:ddi:DDB_G0282677
Uniprot:Q54S43
Length = 1072
Score = 1647 (584.8 bits), Expect = 2.2e-174, Sum P(2) = 2.2e-174
Identities = 370/978 (37%), Positives = 573/978 (58%)
Query: 7 STVKPAAGKPSGNAAANTYAINLDNFSKRLKMLYSHWTEHNSDLWGDSNALAVATPPVSE 66
+T A P+G A ++ NF KR+K+LY W +S+LW +N+L +A +E
Sbjct: 9 TTTTAAPAVPTGPREAT---LDAGNFCKRVKILYDSWNS-DSNLWKSANSLVLALGQPNE 64
Query: 67 DLRYLKSSALNVWLVGYEFPETIMVFLKKQIHFLCSQKKASLLEVIKKSAK---EAVGIE 123
Y K ++L WL GYE +TI+VFL+K+I+ + + KK +L + + ++ + E I+
Sbjct: 65 SNPYQKVTSLQTWLFGYELKDTIIVFLEKEIYIVSTSKKINLFQKLSETEQVKTELSSIK 124
Query: 124 VVIHVKGKTDDGSGLMDKIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKLKKA 183
K+D +K+ G + +K+G +G I +E G L W L +
Sbjct: 125 FNFLTIDKSDKNKSNFEKLIG---EATKAGSN----IGVIIKETYIGDLALQWEAALNEC 177
Query: 184 NFALSDVSNGFSDLFAIKDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSL 243
D++ S +KD E NI +A ++S V+K ++PK+E +ID+ ++ +H+ L
Sbjct: 178 PLTKVDITPALSSCLLVKDLQEQKNIITSAKITSKVLKSHILPKIETIIDKGERQTHNQL 237
Query: 244 MDETEKAILEPARIKVKLKAENVDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIIC 303
D P +I KL E+VD Y PI QSGG +DL+ SASS+DN L++ T ++ C
Sbjct: 238 ADYAADIFESPEKISSKLTVEHVDYSYVPIIQSGGIYDLRASASSDDNPLHF-GTIIVSC 296
Query: 304 AVGSRYNSYCSNVARTFLIDANTVQSKAYEVLLKAHEAAISALKSGNKVSAAY-KAASTV 362
G+RY +YCSN+ART++ID + Q K Y +LL I A+K S+ Y KA T+
Sbjct: 297 --GARYKNYCSNIARTYIIDPTSDQKKNYAILLNVQSNVIKAIKPDVTFSSLYEKAIQTI 354
Query: 363 VEKDAPELAANLTRNAGTGIGLEFRESGLSLNAKNDRILKAGMVFNVSLGFQNLQT-ENK 421
E PEL + +N G GIG+EF+ES LNA N R LKAGM N++ GFQ + E K
Sbjct: 355 KESSKPELVDHFPKNVGYGIGIEFQESLAVLNATNSRTLKAGMTLNIACGFQKISNPEGK 414
Query: 422 NPKTQKFSVLLADTVIVGE--KVPDIVTSKSSKAVKDVAYSF---NEDDEEEEQPKVKAE 476
+ K++ +S+L++DTV++ + KV +++T KA DV Y ++DD+ + P VK E
Sbjct: 415 DEKSKTYSLLISDTVLLNDEGKV-EVLTDVGKKA-SDVVYMLGGEDDDDDNDNDPSVKLE 472
Query: 477 VKGGEPTLSKATLRSDHQEMSKEELRRQHQAELARQKNEETARRLAGGGSSTADNRGSVK 536
+ ++ T+ + + S EE RR HQ ++ QKN + A + +G+ +
Sbjct: 473 LPDDVKGITGRTIETKEKSKSVEERRRDHQ-KMLEQKNLQEAENKIKAMTDPNGKKGTPE 531
Query: 537 TIGDLVAYKNVNDLPP--------PRDLM---IQVDQKNEAILLPIYGSMVPFHVATVKS 585
V Y + L P P+D++ + +D K E +L PI+G MVPFH++T+K+
Sbjct: 532 -----VDYTAITKLQPIYSSVGAYPQDIVKNKMYIDPKKETVLFPIFGYMVPFHISTIKN 586
Query: 586 VSSQQDTNRSCYIRIIFNVPGTSFTPH--DSNSLKFQGSIYLKEVSLRSKDSRHISEVVQ 643
+S ++ YIR+ FN P TS+T D+ + Q +Y++EV+ + D + ++ ++
Sbjct: 587 ISKSEE-----YIRVNFNTP-TSYTQEQIDAGFVPPQ-LMYIREVTYKVNDPKVLANNIR 639
Query: 644 QIKTLRRQVTSRESERAERATLVTQEKLQLASAKFKPLKLFDLWIRPPFGGRGRKLTGSL 703
IK L+++ T+RE+E E+ L+TQEKL L KF P +L ++ RP G R+ G L
Sbjct: 640 LIKELKKKFTTRETEDREKRNLITQEKLILLRGKF-P-RLPEVHARPTLSG-ARRTIGIL 696
Query: 704 EAHTNGFRYS-TSRPDER-VDVMYGNIKHAFFQPAEREMITLLHFHLHNHIMVGNKKTKD 761
EAH NG R++ TS D +DV+Y NIKHA +Q A++E + ++HFHLH+ +M+G KKTKD
Sbjct: 697 EAHENGIRFNPTSTKDRTPIDVLYKNIKHAIYQQADQESMAVIHFHLHDALMIGKKKTKD 756
Query: 762 VQFYIEVMDVVQTLGGGKRSAYDPDEVEEEQRERARKNKINMDFQNFVNRVNDLWGQPQF 821
VQFYIE+ ++ Q+L R ++ DE EEE+RERA K KIN DF+ F+ RV ++ +P
Sbjct: 757 VQFYIEISEMSQSLDVSSR--FN-DEEEEERRERALKEKINNDFKTFIKRVEEIAPEP-- 811
Query: 822 KAFDLEFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGL 881
LEFD P RELGF+GVP+ ++ FI P+ CL+ ++E PF V+TL ++EI ER
Sbjct: 812 ---GLEFDVPYRELGFYGVPNVSTVFIQPSVHCLLSILEPPFFVLTLDDVEIACFERAIR 868
Query: 882 GQKNFDMTIVFKDFKRDVLRIDSIPSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTIT 941
KNFD++ VFKD+ R +RI IP + + +KEWLD+ ++K+Y+S N NW+ I+ TI
Sbjct: 869 SLKNFDLSFVFKDYNRPPIRISVIPRNYFETVKEWLDSFNIKFYQSERNYNWKRIMDTIK 928
Query: 942 DDPEKFIEDGGWEFLNME 959
D +KF +DGGW FL++E
Sbjct: 929 SDVKKFHDDGGWSFLDLE 946
Score = 69 (29.3 bits), Expect = 2.2e-174, Sum P(2) = 2.2e-174
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 1015 KGKTWEELEREASYADREKGADSDSEDERKRRKMKAFGKARAPEKRNPGGS 1065
+G+ WE+LE++A D+ K D E +++R K+ + P G S
Sbjct: 988 EGENWEDLEQKAERDDKMKTFD---ETNKRKRDEKSVSSSNRPSSSKSGSS 1035
>POMBASE|SPBP8B7.19 [details] [associations]
symbol:spt16 "FACT complex subunit Spt16" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006334
"nucleosome assembly" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=ISO] [GO:0035101 "FACT
complex" evidence=IDA] [GO:0043486 "histone exchange" evidence=IC]
[GO:0044732 "mitotic spindle pole body" evidence=IDA]
InterPro:IPR000994 Pfam:PF00557 PomBase:SPBP8B7.19 GO:GO:0006355
GO:GO:0044732 EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR
GO:GO:0006261 GO:GO:0000790 GO:GO:0006368 GO:GO:0043486
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0006334 GO:GO:0035101
InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5406 HOGENOM:HOG000209079
OMA:MEIIDAD InterPro:IPR013953 Pfam:PF08644 OrthoDB:EOG4QC4DF
PIR:T40813 RefSeq:NP_596526.1 PDB:3CB5 PDB:3CB6 PDBsum:3CB5
PDBsum:3CB6 ProteinModelPortal:O94267 SMR:O94267 DIP:DIP-44081N
STRING:O94267 EnsemblFungi:SPBP8B7.19.1 GeneID:2541355
KEGG:spo:SPBP8B7.19 EvolutionaryTrace:O94267 NextBio:20802464
Uniprot:O94267
Length = 1019
Score = 1619 (575.0 bits), Expect = 3.0e-170, Sum P(2) = 3.0e-170
Identities = 359/954 (37%), Positives = 554/954 (58%)
Query: 25 YAINLDNFSKRLKMLYSHWT--EHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVG 82
Y I+ F KRL +L + W E L+ D +++ V + Y KS+AL+ WL+G
Sbjct: 4 YEIDEITFHKRLGILLTSWKNEEDGKTLFQDCDSILVTVGAHDDTNPYQKSTALHTWLLG 63
Query: 83 YEFPETIMVFLKKQIHFLCSQKKASLLEVIKKSAKEAVGIEVVIHVKGKTDDGSGLMDKI 142
YEFP T+++ K +I L S KA++L + ++ A + ++ K ++ L +KI
Sbjct: 64 YEFPSTLILLEKHRITILTSVNKANMLTKLAETKGAAADVNILKRTKD-AEENKKLFEKI 122
Query: 143 FGAVNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKLK--KANFALSDVSNGFSDLFAI 200
+ +K VG ++ +GK + W+ + K+ F L D S G + AI
Sbjct: 123 IEYIRATNKK-------VGVFPKDKTQGKFINEWDSIFEPVKSEFNLVDASLGLAKCLAI 175
Query: 201 KDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILEPARIKVK 260
KD+ EL NIK A+ +S +VM ++ V +L ID+ KK++HS D+ E I A + K
Sbjct: 176 KDEQELANIKGASRVSVAVMSKYFVDELSTYIDQGKKITHSKFSDQMESLIDNEAFFQTK 235
Query: 261 -LKAENVDI-----CYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCS 314
LK ++D+ CY PI QSGG +DLKPSA ++D L+ D V++C++G RY SYCS
Sbjct: 236 SLKLGDIDLDQLEWCYTPIIQSGGSYDLKPSAITDDRNLHGD---VVLCSLGFRYKSYCS 292
Query: 315 NVARTFLIDANTVQSKAYEVLLKAHEAAISALKSGNKVSAAYKAASTVVEKDAPELAANL 374
NV RT+L D ++ Q K Y L+ + + G + Y ++ P+L N
Sbjct: 293 NVGRTYLFDPDSEQQKNYSFLVALQKKLFEYCRDGAVIGDIYTKILGLIRAKRPDLEPNF 352
Query: 375 TRNAGTGIGLEFRESGLSLNAKNDRILKAGMVFNVSLGFQNLQTEN-KNPKTQKFSVLLA 433
RN G GIG+EFRES L +NAKN R+L+AGM N+S+GF NL + KN +++++++LL
Sbjct: 353 VRNLGAGIGIEFRESSLLVNAKNPRVLQAGMTLNLSIGFGNLINPHPKNSQSKEYALLLI 412
Query: 434 DTVIVGEKVPDIVTSKSSKAVKDVAYSFNEDDEE-EEQPKVKAEVKGGEPTLS--KATLR 490
DT+ + P IV + S KA D++Y F EDD E+ K + G T+S K R
Sbjct: 413 DTIQITRSDP-IVFTDSPKAQGDISYFFGEDDSSLEDGVKPRKPPTRGTATISSHKGKTR 471
Query: 491 SDHQEM--SKEELRRQHQAELARQKNEETARRLAGGGSSTADNRGSVK-TIGDLVAYKNV 547
S+ +++ S E+ R +HQ +LA +K E +R A G + + G K T+ +YK
Sbjct: 472 SETRDLDDSAEKRRVEHQKQLASRKQAEGLQRFAQG---SVPSSGIEKPTVKRFESYKRD 528
Query: 548 NDLPPP-RDLMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRSCYIRIIFNVPG 606
+ LP +L I VD + ++I+LPI+G VPFH++T+K+ +S+ D Y+R+ F PG
Sbjct: 529 SQLPQAIGELRILVDYRAQSIILPIFGRPVPFHISTLKN-ASKNDEGNFVYLRLNFVSPG 587
Query: 607 TSFTPHDSNSLKFQGSIYLKEVSLRSKDSRHISEVVQQIKTLRRQVTSRESERAERATLV 666
D + + +++ + RS ++ +S+V + I+ +++ T RE+ER E A ++
Sbjct: 588 QIGGKKDELPFEDPNAQFIRSFTFRSSNNSRMSQVFKDIQDMKKAATKRETERKEFADVI 647
Query: 667 TQEKLQLASAKFKPLKLFDLWIRPPFGGRGRKLTGSLEAHTNGFRY-STSRPDERVDVMY 725
Q+KL K +P + D+++RP G+ +L G +E H NG RY S R D +D+++
Sbjct: 648 EQDKLIEIKNK-RPAHINDVYVRPAIDGK--RLPGFIEIHQNGIRYQSPLRSDSHIDLLF 704
Query: 726 GNIKHAFFQPAEREMITLLHFHLHNHIMVGNKKTKDVQFYIEVMDVVQTLGGGKRSAY-- 783
N+KH FFQP E E+I L+H HL IMVG +KT+DVQFY EV D+ G K+ Y
Sbjct: 705 SNMKHLFFQPCEGELIVLIHVHLKAPIMVGKRKTQDVQFYREVSDIQFDETGNKKRKYMY 764
Query: 784 -DPDEVEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFHGVPH 842
D DE+E+EQ ER R+ +++ +F++F ++ + +E D P REL F+GVP
Sbjct: 765 GDEDELEQEQEERRRRAQLDREFKSFAEKIAEA------SEGRIELDIPFRELAFNGVPF 818
Query: 843 KASAFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRI 902
+++ + PT+ CLV+L +TPF VITL+EIEI +LERV G KNFD+ +F+DF+R + I
Sbjct: 819 RSNVLLQPTTDCLVQLTDTPFTVITLNEIEIAHLERVQFGLKNFDLVFIFQDFRRPPIHI 878
Query: 903 DSIPSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFL 956
++IP LD +KEWLD+ D+ +YE LNLNW I+KT+ +DP F E+GGW FL
Sbjct: 879 NTIPMEQLDNVKEWLDSCDICFYEGPLNLNWTTIMKTVNEDPIAFFEEGGWGFL 932
Score = 58 (25.5 bits), Expect = 3.0e-170, Sum P(2) = 3.0e-170
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 1016 GKTWEELEREASYADREKGADSDSEDERKRRK 1047
G+ W+ELER+A R++ A D+ +ER +K
Sbjct: 989 GEDWDELERKA----RQEDAKHDAFEERPSKK 1016
Score = 43 (20.2 bits), Expect = 1.1e-168, Sum P(2) = 1.1e-168
Identities = 16/36 (44%), Positives = 19/36 (52%)
Query: 1025 EASYADREKGADSDSEDERKRRKMKAFGKARAPEKR 1060
E+ D E G D D E ERK R+ A K A E+R
Sbjct: 980 ESEVEDEESGEDWD-ELERKARQEDA--KHDAFEER 1012
>UNIPROTKB|Q9W603 [details] [associations]
symbol:supt16h "FACT complex subunit SPT16" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000994 Pfam:PF00557 GO:GO:0005634 GO:GO:0005694
GO:GO:0006355 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
Gene3D:3.90.230.10 SUPFAM:SSF55920 InterPro:IPR013719 Pfam:PF08512
CTD:11198 HOVERGEN:HBG092544 InterPro:IPR013953 Pfam:PF08644
EMBL:AB004794 EMBL:BC072746 RefSeq:NP_001084166.1 UniGene:Xl.7983
ProteinModelPortal:Q9W603 PRIDE:Q9W603 GeneID:399345
KEGG:xla:399345 Xenbase:XB-GENE-979310 Uniprot:Q9W603
Length = 1035
Score = 1586 (563.4 bits), Expect = 4.3e-169, Sum P(2) = 4.3e-169
Identities = 357/955 (37%), Positives = 558/955 (58%)
Query: 26 AINLDN--FSKRLKMLYSHWTEHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGY 83
A+ LD + +R+K + W + D + + +A+ V+ V E++ Y KS+AL WL GY
Sbjct: 2 AVTLDKEAYYRRIKRFFGSWKK-GDDEFANVDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 84 EFPETIMVFLKKQIHFLCSQKKASLLEVIK--KSAKEAVGIEVV-IHVKGKTDDGS-GLM 139
E +TIMVF +++I F+ S+KK L+ I K + A G + + V+ K ++ + G
Sbjct: 60 ELTDTIMVFCEEKILFMASKKKVEFLKQIANTKGNENANGTPAITLLVREKQNESNKGNF 119
Query: 140 DKIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKLKKANFALSDVSNGFSDLFA 199
DK+ A+ SK G + +G ++ G +++W + L K +F D+S + A
Sbjct: 120 DKMIEAIK-VSKKGKR----IGVFIKDKFPGDFMKSWYDILNKESFEKVDISASVAYTIA 174
Query: 200 IKDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILEPARIKV 259
+K++ EL +KKAA ++S V +F ++ +++D ++KV H L + EKAI E +
Sbjct: 175 VKEEGELNLMKKAASITSDVFSKFFKDRVMEIVDADEKVRHGKLAESVEKAI-EDKKYLG 233
Query: 260 KLKAENVDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCSNVART 319
+++CYPPI QSGG ++LK S S+ N++++ + I CA+G RY SYCSN+ RT
Sbjct: 234 GTDPSTIEMCYPPIIQSGGNYNLKFSVVSDKNHMHFGA---ITCALGIRYKSYCSNLVRT 290
Query: 320 FLIDANTVQSKAYEVLLKAHEAAISALKSGNKVSAAYKAASTVVEKDAPELAANLTRNAG 379
++D + Y LL+ E + LK G K+ AY+ V+K P+L + +T+ G
Sbjct: 291 LMVDPTQEMQENYNFLLQLQEELLKELKHGAKICDAYQVIMDQVKKQKPDLMSKITKTLG 350
Query: 380 TGIGLEFRESGLSLNAKNDRILKAGMVFNVSLGFQNLQTE-NKNPKTQKFSVLLADTVIV 438
+G+EFRE L +N KN LK GMVF+V LG L + K P+ + +++ + DTV+V
Sbjct: 351 FAMGIEFREGSLVINNKNQYKLKKGMVFSVHLGLAELNNKMGKKPEEKTYALFVGDTVLV 410
Query: 439 GEKVPDIVTSKSSKAVKDVA-YSFNEDDEEEEQPKVKAEVKGGEPTLSKATLRS-DHQEM 496
E+ V + K VK+V + ED+EEEE+ K +AE G + + A L EM
Sbjct: 411 NEEGAATVLTNVKKKVKNVGIFLKKEDEEEEEEEKDEAEDLLGRGSRAAALLTERTRNEM 470
Query: 497 SKEELRRQHQAELARQKNEETARRLAG--GGSSTADNRGSVKTIGDLVAYKNVNDLPP-P 553
+ EE RR HQ ELA Q N+E RRL GG T R S V+YKN + +P P
Sbjct: 471 TAEEKRRTHQKELATQLNDEAKRRLTEQKGGQQTMKARKSN------VSYKNASQVPKEP 524
Query: 554 --RDLMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRSCYIRIIFNVPGTSFTP 611
R++ + +D+K E +++P++G PFH+AT+K++S + + + Y+RI F PG++
Sbjct: 525 ELREMKLYIDKKYETVIMPVFGISTPFHIATIKNISMSVEGDYT-YLRINFFCPGSALGR 583
Query: 612 HDSNSLKFQGSIYLKEVSLRSKD----------SRHISEVVQQIKTLRRQVTSRESERAE 661
++ N + ++KE++ R+ + S ++ + IK ++++ +RE+E E
Sbjct: 584 NEGNIFPNPEATFVKEITYRASNVKTPGDPSVPSLNLQNAFRIIKEVQKRYKTREAEEKE 643
Query: 662 RATLVTQEKLQLASAKFKPLKLFDLWIRPPFGGRGRKLTGSLEAHTNGFRYSTSRPDERV 721
+ +V Q+ L + + P KL DL+IRP + ++ GSLEAH NGFR+++ R D +V
Sbjct: 644 KEGIVKQDSLVINLNRSNP-KLKDLYIRPNIAQK--RMQGSLEAHVNGFRFTSVRGD-KV 699
Query: 722 DVMYGNIKHAFFQPAEREMITLLHFHLHNHIMVGNKKTKDVQFYIEVMDVVQTLGGGKRS 781
D++Y NIKHA FQP + EMI +LHFHL N IM G K+ DVQFY EV ++ LG +
Sbjct: 700 DILYNNIKHALFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHM 759
Query: 782 AYDPDEVEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFHGVP 841
+D D++ EQ ER ++K+ F+NF+ +V L + DLEF+ P R+LGF+G P
Sbjct: 760 -HDRDDLYAEQLEREMRHKLKTAFKNFIEKVESLTKE------DLEFEIPFRDLGFNGAP 812
Query: 842 HKASAFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLR 901
++++ + PTSS LV E P V+TL E+E+V+ ERV KNFDM IV+K++ + V
Sbjct: 813 YRSTCLLQPTSSSLVNTTEWPPFVVTLDEVELVHFERVQFHLKNFDMVIVYKEYGKKVTM 872
Query: 902 IDSIPSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFL 956
I++IP +SLD IKEWL++ D+KY E +LNW I+KTI DDPE F E GGW FL
Sbjct: 873 INAIPMASLDPIKEWLNSCDIKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSFL 927
Score = 80 (33.2 bits), Expect = 4.3e-169, Sum P(2) = 4.3e-169
Identities = 18/45 (40%), Positives = 22/45 (48%)
Query: 1016 GKTWEELEREASYADREKGADSDSEDERKRRKMKAFGKARAPEKR 1060
GK W+ELE EA ADRE + E + RK K P K+
Sbjct: 988 GKDWDELEEEARKADRESLYEEVEEQKSGNRKRKGHAPLPNPSKK 1032
>FB|FBgn0002183 [details] [associations]
symbol:dre4 "dre4" species:7227 "Drosophila melanogaster"
[GO:0006268 "DNA unwinding involved in replication" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0001672 "regulation of
chromatin assembly or disassembly" evidence=IMP] [GO:0035101 "FACT
complex" evidence=IDA;TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0032968 "positive
regulation of transcription elongation from RNA polymerase II
promoter" evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000994 Pfam:PF00557 GO:GO:0005694 EMBL:AE014296
GO:GO:0022008 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
GO:GO:0003682 Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0032968
GO:GO:0001672 GO:GO:0035101 InterPro:IPR013719 Pfam:PF08512
eggNOG:COG5406 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 OMA:GARYKNY EMBL:AF023269
EMBL:AF023270 EMBL:BT010116 EMBL:AB083008 PIR:T13928 PIR:T13929
RefSeq:NP_476610.2 RefSeq:NP_728686.2 UniGene:Dm.5723
ProteinModelPortal:Q8IRG6 SMR:Q8IRG6 STRING:Q8IRG6 PaxDb:Q8IRG6
EnsemblMetazoa:FBtr0072865 GeneID:38248 KEGG:dme:Dmel_CG1828
CTD:38248 FlyBase:FBgn0002183 InParanoid:Q8IRG6 OrthoDB:EOG40CFXV
GenomeRNAi:38248 NextBio:807718 Bgee:Q8IRG6 GermOnline:CG1828
Uniprot:Q8IRG6
Length = 1083
Score = 1576 (559.8 bits), Expect = 8.3e-164, Sum P(2) = 8.3e-164
Identities = 369/1063 (34%), Positives = 578/1063 (54%)
Query: 23 NTYAINLDNFSKRLKMLYSHWTE----HNSDLWGDSNALAVATPPVSEDLRYLKSSALNV 78
+++ ++ + F +R+K LY+ W H+ L +++ V ED+ Y KS AL +
Sbjct: 2 SSFVLDKEAFVRRVKRLYTEWRAPSIGHDDALRNLDCIMSIVG--VEEDVMYSKSMALQL 59
Query: 79 WLVGYEFPETIMVFLKKQIHFLCSQKKASLLEVIKKSAKEAVGIEVVIHVKGKTDDGSGL 138
WL+GYE +TI VF ++FL S+KK L+ + +E E+ + V+ +TD G
Sbjct: 60 WLLGYELTDTISVFCSDAVYFLTSKKKIEFLKQTQNITEEGFP-EINLLVRDRTDKDQGN 118
Query: 139 MDKIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKLKKANFALSDVSNGFSDLF 198
+K+ A+ + SK G + +G +++A G+ E W + L + F D+S + L
Sbjct: 119 FEKLIKALQN-SKKGKR----LGVFAKDAYPGEFSEAWKKSLTASKFEHVDISTIIAYLM 173
Query: 199 AIKDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILEPARIK 258
KD++E+ NI+KA+ +S + +++ ++ +ID ++KV H+ L D E AI E +
Sbjct: 174 CPKDESEINNIRKASLVSMDIFNKYLKDEIMDIIDSDRKVKHNKLSDGCEAAIGEK-KYT 232
Query: 259 VKLKAENVDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCSNVAR 318
L +D+ YPPI QSGG + LK SA ++ N L++ VI+C++G+RY SYCSN++R
Sbjct: 233 SGLDPRLLDMAYPPIIQSGGAYSLKFSAVADKNPLHF---GVIVCSLGARYKSYCSNISR 289
Query: 319 TFLIDANTVQSKAYEVLLKAHEAAISALKSGNKVSAAYKAASTVVEKDAPELAANLTRNA 378
TFL++ + Y L+ E + L G K+ Y+ V+K+ P + NL ++
Sbjct: 290 TFLVNPTEAMQENYTFLVSVQEEILKLLVPGTKLCDVYEKTLDFVKKEKPSMVDNLPKSF 349
Query: 379 GTGIGLEFRESGLSLNAKNDRILKAGMVFNVSLGFQNLQTENKNPKTQK-FSVLLADTVI 437
G +GLEFRE+ + + K +LK MVFN+ +G NL K K +++ + DTV+
Sbjct: 350 GFAMGLEFRENSIVIGPKCQALLKKNMVFNLHVGISNLTNPEATDKEGKNYALFIGDTVL 409
Query: 438 VGEKVPDIVTSKSSKAVKDVAYSFNED-DEEEEQPKVKAEVKGGEPTLSK----ATLRSD 492
VGE+ P V + S K +K+V +D DEE+ K A+ G L + A L S
Sbjct: 410 VGEQSPASVMTPSKKKIKNVGIFIKDDSDEEDVDDKKTAKEDQGTEILGRSKRNAVLESK 469
Query: 493 -HQEMSKEELRRQHQAELARQKNEETARRLAGGGSSTADNRGSVKTIGDLVAYKNVNDLP 551
E++ EE R++HQ ELA+Q NE RLA G+S + T V+YK+++ +P
Sbjct: 470 LRNEINTEEKRKEHQRELAQQLNERAKDRLARQGNSKEVEKVRKNT----VSYKSISQMP 525
Query: 552 --PP-RDLMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRSCYIRIIFNVPGTS 608
P ++L + VD+K E +++P++G VPFH++T+K++S Q Y+RI F PG +
Sbjct: 526 REPEVKELKLYVDKKYETVIMPVFGIQVPFHISTIKNIS-QSVEGEYTYLRINFFHPGAT 584
Query: 609 FTPHDSNSLKFQGSIYLKEVSLRSKD----------SRHISEVVQQIKTLRRQVTSRESE 658
++ + ++KEV+ RS + S +++ + IK ++++ +RE+E
Sbjct: 585 MGRNEGGLYPQPEATFVKEVTYRSSNVKEHGEVGAPSANLNNAFRLIKEVQKRFKTREAE 644
Query: 659 RAERATLVTQEKLQLASAKFKPLKLFDLWIRPPFGGRGRKLTGSLEAHTNGFRYSTSRPD 718
E+ LV Q+ L L+ K P KL DL+IRP + ++TGSLEAH+NGFRY + R D
Sbjct: 645 EREKEDLVKQDTLILSQNKGNP-KLKDLYIRPNIVTK--RMTGSLEAHSNGFRYISVRGD 701
Query: 719 ERVDVMYGNIKHAFFQPAEREMITLLHFHLHNHIMVGNKKTKDVQFYIEVMDVVQTLGGG 778
+VD++Y NIK AFFQP + EMI LLHFHL IM G KK DVQFY EV ++ LG
Sbjct: 702 -KVDILYNNIKSAFFQPCDGEMIILLHFHLKYAIMFGKKKHVDVQFYTEVGEITTDLGKH 760
Query: 779 KRSAYDPDEVEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFH 838
+ +D D++ EQ ER ++K+ F++F +V + K+ +EFD P RELGF
Sbjct: 761 QHM-HDRDDLAAEQAERELRHKLKTAFKSFCEKVETMT-----KSV-VEFDTPFRELGFP 813
Query: 839 GVPHKASAFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRD 898
G P +++ + PTS LV L E P VITL ++E+V+ ERV +NFDM VFK++ +
Sbjct: 814 GAPFRSTVTLQPTSGSLVNLTEWPPFVITLDDVELVHFERVQFHLRNFDMIFVFKEYNKK 873
Query: 899 VLRIDSIPSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNM 958
V +++IP + LD +KEWL++ D++Y E +LNW+ I+KTITDDPE F E GGW FL+
Sbjct: 874 VAMVNAIPMNMLDHVKEWLNSCDIRYSEGVQSLNWQKIMKTITDDPEGFFEQGGWTFLDP 933
Query: 959 EAXXXXXXXXXXXXXGYEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKT 1018
E+ E GK
Sbjct: 934 ESGSEGENETAESEED-EAYNPTDAESDEESDEDSEYSEASEDSEESDEDLGSDEESGKD 992
Query: 1019 WEELEREASYADREKGADSDSEDERKRRKMKAFGKA--RAPEK 1059
W +LEREA+ DR +D + + K GK+ +P K
Sbjct: 993 WSDLEREAAEEDRNHDYAADDKPRNGKFDSKKHGKSSKHSPSK 1035
Score = 40 (19.1 bits), Expect = 8.3e-164, Sum P(2) = 8.3e-164
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 1020 EELEREASYADR-EKGADSDSE---DERKRRKMKAFGKARAPEKRN 1061
EE + ++ Y++ E +SD + DE + + A E RN
Sbjct: 961 EESDEDSEYSEASEDSEESDEDLGSDEESGKDWSDLEREAAEEDRN 1006
>ASPGD|ASPL0000031805 [details] [associations]
symbol:AN5102 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0009987 "cellular
process" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IEA] [GO:0035101 "FACT complex" evidence=IEA]
InterPro:IPR000994 Pfam:PF00557 GO:GO:0005634 GO:GO:0005694
GO:GO:0006355 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
EMBL:BN001305 Gene3D:3.90.230.10 SUPFAM:SSF55920 EMBL:AACD01000088
InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5406 HOGENOM:HOG000209079
InterPro:IPR013953 Pfam:PF08644 RefSeq:XP_662706.1 STRING:Q5B2X8
GeneID:2871397 KEGG:ani:AN5102.2 OMA:FENIKHV OrthoDB:EOG4QC4DF
Uniprot:Q5B2X8
Length = 1019
Score = 1510 (536.6 bits), Expect = 7.6e-161, Sum P(2) = 7.6e-161
Identities = 331/953 (34%), Positives = 536/953 (56%)
Query: 32 FSKRLKMLYSHWT---EHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGYEFPET 88
F RL Y+ W + ++G + ++ + E Y K++A++ WL+GYEFP T
Sbjct: 12 FFNRLSSFYAAWKADKRSTNSVFGGAGSIIILMGKTDEANSYQKNNAIHFWLLGYEFPAT 71
Query: 89 IMVFLKKQIHFLCSQKKASLLEVIKKSAKEAVGIEVVIHVKGKTDDGSGLMDKIFGAVND 148
+ VF + ++ + + KKA LE +K K + +E+++ K + ++ + L +K +
Sbjct: 72 LFVFTPEVMYVVTTAKKAKHLEPLK-GGK--IPVEILVTTKDQ-EEKTRLFEKCVDII-- 125
Query: 149 QSKSGGQNSPVVGHISREAPEGKLLETWNEKLKKANFALS--DVSNGFSDL-FAIKDDTE 205
KS G VG + R+ G +E W K + + D+S S F++KD E
Sbjct: 126 --KSAGNK---VGILPRDTTTGPFVEDWKRVYGKISGDVEEVDISPALSAACFSVKDTDE 180
Query: 206 LTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSL---MD---ETEKAILEPARIKV 259
L +I+ A+ S +M + V ++ +++DEEK+++H +L +D + K + A++
Sbjct: 181 LVSIRNASRACSGLMSDYFVDEMSRLLDEEKQMTHKALSMRIDAKIDDAKFFNKLAKLPS 240
Query: 260 KLKAENVDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCSNVART 319
+ + +D Y P+ QSGG++DLK +A S+DN L +II G RY +Y S + RT
Sbjct: 241 EFDPQQIDWAYGPVIQSGGKYDLKLTAVSDDNNL---EPGIIIAGFGIRYKTYSSIIGRT 297
Query: 320 FLIDANTVQSKAYEVLLKAHEAAISALKSGNKVSAAYKAASTVVEKDAPELAANLTRNAG 379
+L+D Q Y +LL HEA + + G Y A +V PEL ++ +N G
Sbjct: 298 YLVDPTKSQEANYSLLLSVHEAVLKEARDGVVAKELYNKAIGIVRARKPELESHFVKNVG 357
Query: 380 TGIGLEFRESGLSLNAKNDRILKAGMVFNVSLGFQNLQTEN-KNPKTQKFSVLLADTVIV 438
GIG+E R+S + LN KN R+LK+GM F++++G +++ + K+ K +S+++ DTV V
Sbjct: 358 AGIGIELRDSNMILNGKNTRVLKSGMTFSITVGLVDVEEPSVKDKKKNVYSMMITDTVRV 417
Query: 439 GEKVPDIVTSKSSKAVKDVAYSFNEDDEEEEQPKVKAEVKGG---EPTLSKATLRSDHQE 495
GE+ P + T + + V++ F +++E ++ K K E K +++ LR++
Sbjct: 418 GEQGPHVFTKDAGIDMDSVSFYFGDEEEPQKPAKEKKETKSSAIASRNVTRTKLRAERPT 477
Query: 496 M---SKEELRRQHQAELARQKNEETARRLAGGGSSTADNRG-SVKTIGDLVAYKNVNDLP 551
E RR+HQ ELA +K +E R AG +T D+ G + K +YK N LP
Sbjct: 478 QVNEGAEARRREHQKELAAKKTKEGLDRFAG---TTGDDNGVTQKKFKRFESYKRDNQLP 534
Query: 552 PP-RDLMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRSCYIRIIFNVPGTSFT 610
+DL + VD K +++P+ G VPFH+ T+K+ +S+ D Y+RI F PG
Sbjct: 535 AKVKDLTVYVDHKASTVIVPVMGRPVPFHINTIKN-ASKSDEGEYAYLRINFLSPGQGVG 593
Query: 611 PHDSNSLKFQGSIYLKEVSLRSKDSRHISEVVQQIKTLRRQVTSRESERAERATLVTQEK 670
D + + +L+ ++LRSKD+ ++V Q I LR+ RE E+ E +V Q+K
Sbjct: 594 RKDDQPFEDLSAHFLRNLTLRSKDNDRFAQVAQDITELRKNALRREQEKKEMEDVVEQDK 653
Query: 671 LQLASAKFKPLKLFDLWIRPPFGGRGRKLTGSLEAHTNGFRYSTSRPDERVDVMYGNIKH 730
L + +P+KL D+++RPP G+ ++ G +E H NG RY + +E VDV++ N+KH
Sbjct: 654 L-VEIRNRRPVKLPDVYLRPPLDGK--RVPGEVEIHQNGLRYVSPFRNEHVDVLFSNVKH 710
Query: 731 AFFQPAEREMITLLHFHLHNHIMVGNKKTKDVQFYIEVMDVVQTLGGGKRSAY---DPDE 787
FFQP E+I L+H HL IM+G +KT+D+QFY E ++ G +R + D +E
Sbjct: 711 LFFQPCAHELIVLIHVHLKTPIMIGKRKTRDIQFYREATEMQFDETGNRRRKHRYGDEEE 770
Query: 788 VEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFHGVPHKASAF 847
E EQ ER R+ ++ +F+ F ++ D G+ + ++ D P RE+GF GVP++++
Sbjct: 771 FEAEQEERRRRAALDREFKAFAEKIADA-GKDE----GVDVDIPFREIGFTGVPNRSNVL 825
Query: 848 IVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPS 907
I PT+ LV+L E PF+VI+L+EIEI +LERV G KNFD+ VFKDF R + I++IP
Sbjct: 826 IQPTTDALVQLTEPPFLVISLNEIEIAHLERVQFGLKNFDLVFVFKDFHRAPVHINTIPV 885
Query: 908 SSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEA 960
+L+G+K+WLD+ D+ Y E LNLNW I+KT+ DP F DGGW FL E+
Sbjct: 886 ENLEGVKDWLDSVDIAYTEGPLNLNWTTIMKTVVSDPYGFFADGGWSFLAAES 938
Score = 78 (32.5 bits), Expect = 7.6e-161, Sum P(2) = 7.6e-161
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 1016 GKTWEELEREASYADREKGADSDSEDERKRRK 1047
G+ W+ELE +A DRE G D ED K+RK
Sbjct: 989 GEDWDELEHQAKKKDRESGLDD--EDRGKKRK 1018
>WB|WBGene00018849 [details] [associations]
symbol:F55A3.3 species:6239 "Caenorhabditis elegans"
[GO:0009987 "cellular process" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0051301 "cell
division" evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP]
InterPro:IPR000994 Pfam:PF00557 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005694 GO:GO:0006355 GO:GO:0006260
GO:GO:0018996 GO:GO:0006281 GO:GO:0006351 GO:GO:0000910
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0006997 GO:GO:0001703
EMBL:FO080793 InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5406
HOGENOM:HOG000209079 InterPro:IPR013953 Pfam:PF08644
RefSeq:NP_492821.1 ProteinModelPortal:Q9N5R9 SMR:Q9N5R9
STRING:Q9N5R9 PaxDb:Q9N5R9 EnsemblMetazoa:F55A3.3.1
EnsemblMetazoa:F55A3.3.2 GeneID:172984 KEGG:cel:CELE_F55A3.3
UCSC:F55A3.3 CTD:172984 WormBase:F55A3.3
GeneTree:ENSGT00390000014495 InParanoid:Q9N5R9 OMA:GARYKNY
NextBio:877797 Uniprot:Q9N5R9
Length = 1030
Score = 1548 (550.0 bits), Expect = 6.8e-159, P = 6.8e-159
Identities = 375/1054 (35%), Positives = 570/1054 (54%)
Query: 27 INLDNFSKRLKMLYSHWTEHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGYEFP 86
+N D F +R + LY HW E +D G + ++A D Y K+SAL WL G+E
Sbjct: 8 LNKDLFFQRAERLYEHW-EKGAD--GLDSIKSLAFVYGETDNPYTKTSALFTWLFGHEIA 64
Query: 87 ETIMVFLKKQIHFLCSQKKASLLEVIKKSAKEAVGIEVVIHV-KGKTDDGSGLMDKIFGA 145
+T+++ LK I+ L S +K + + + + V + + KTD +G +K+
Sbjct: 65 DTVLLLLKDHIYILGSNRKVEFFGSVTGDNQSSGKVPTVSTLLRDKTDKDAGNFEKLI-- 122
Query: 146 VNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKLKKANFALSDVSNGFSDLFAIKDDTE 205
D KS G + VG+ +E + + +WN+ L++ +DV+ F+ LFA+KDD E
Sbjct: 123 --DHIKSAGGD---VGNFVKEKFSSEFVSSWNKALEEGGVNKNDVTLAFTHLFAVKDDKE 177
Query: 206 LTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILEPARIKVKLKAEN 265
+ I+K+A +++ +E +ID+EK+V HS L +E A ++ ++++ L
Sbjct: 178 MDLIRKSAQATTASWTAARARYVE-IIDQEKRVRHSVLSNEFA-AFMKDSKVQQALAKYE 235
Query: 266 VDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCSNVARTFLIDAN 325
D CY PI SGG + K + S++++L+ II + G+R + YC+N+ RT LI +
Sbjct: 236 ADTCYDPIVMSGGNYSFKWNHESSESHLH-SQFGTIITSFGARLSEYCTNLTRTMLIFPS 294
Query: 326 TVQSKAYEVLLKAHEAAISALKSGNKVSAAYKAA-STVVEKDAPELAANLTRNA-GTGIG 383
+ AYE +L A A I+ALK G K+S YK T+ EK +P+LA L + G G
Sbjct: 295 SELETAYEAILAAELAVIAALKPGAKLSDVYKIGIDTLTEK-SPKLAETLNKKELGFATG 353
Query: 384 LEFRESGLSLNAKNDRILKAGMVFNVSLGFQNLQTENKNPKTQKFSVLLADTVIVGEKVP 443
+EFRES L+++AK D ++KAGMVF V +G ++ +NK K + ++ ++DT++V E+
Sbjct: 354 IEFRESRLAISAKCDEVVKAGMVFIVYIGVDSIPNKNKGEKGKPAAIAISDTILVKEEGD 413
Query: 444 -DIVTSKSSKAVKDVAYSFNEDDEEEEQPKVKAEVKG-GEPTLSKATLRSDHQEMSKEEL 501
+I+T K+ +K F E+ E E K + K G S + + EEL
Sbjct: 414 NEILTEKAKSRLKSNVIKFKEEQENREAEKDNDQKKMLGRGQRSVVLTDQTRNKTTNEEL 473
Query: 502 RRQHQAELARQKNEETARRLAGGGSSTADNRGSVKTIGDLVAYKNVNDLPPPRD---LMI 558
R++ Q EL Q NE RL+ G T D + S K+ V+YK P D ++I
Sbjct: 474 RKERQKELGVQLNELAKARLSKQGGGT-DEKKSKKSN---VSYKTEERFPQDADVQKMLI 529
Query: 559 QVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRSCYIRIIFNVPGTSFTPHDSNSLK 618
VD+K +++++PI+G VPFH++ +K+ S + + + Y+RI F PG+ DS
Sbjct: 530 FVDRKYDSVVVPIFGIPVPFHISMIKNCSQSVEGDFT-YLRINFATPGSQ-VGKDSGQFP 587
Query: 619 FQGSIYLKEVSLRS---KD--------SRHISEVVQQIKTLRRQVTSRESERAERATLVT 667
+ Y+KE++ R+ KD S ++S + IK ++++ + E+E E+ V
Sbjct: 588 HPLAHYMKELTFRASNIKDHHSDSTAPSHNLSTAFRLIKEMQKRFKTEEAEEREKEGAVK 647
Query: 668 QEKLQLASAKFKPLKLFDLWIRPPFGGRGRKLTGSLEAHTNGFRYSTSRPDERVDVMYGN 727
Q+KL L+ K P KL DL IRP +++TGSLEAHTNGFRY++ R D R+DV+Y N
Sbjct: 648 QDKLILSQNKLNP-KLKDLLIRPNI--IQKRITGSLEAHTNGFRYTSLRGD-RIDVLYNN 703
Query: 728 IKHAFFQPAEREMITLLHFHLHNHIMVGNKKTKDVQFYIEVMDVVQTLGGGKRSAYDPDE 787
IKHAFFQP + EMI LLHFHL N ++ G KK KDVQFY EV ++ LG D D+
Sbjct: 704 IKHAFFQPCDNEMIILLHFHLKNPVLWGKKKYKDVQFYTEVGEITTDLGK-YHHMQDRDD 762
Query: 788 VEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFHGVPHKASAF 847
++ EQ+ER + ++N F +F +V+ L QF EFD P LGF GVP++++
Sbjct: 763 MQSEQQEREMRRRLNAAFNSFCEKVSRLTND-QF-----EFDSPFAGLGFFGVPYRSATT 816
Query: 848 IVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPS 907
+ PT+SCLV L E P ++TLSE+E+V+ ERV L KNFDM +FKD+K + IP
Sbjct: 817 LKPTASCLVNLTEWPTFIVTLSEVELVHFERVSLQLKNFDMVFIFKDYKIKPQMVAQIPM 876
Query: 908 SSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEAXXXXXXX 967
SS+D IKEWL T D+ Y E +LNW ++KTITDD E F E+GGW FLN+E+
Sbjct: 877 SSIDKIKEWLHTCDIWYSEGIQSLNWAKVMKTITDDLEAFFEEGGWSFLNVESDNEEAMD 936
Query: 968 XXXXXXGYEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XKGKTWEELEREA 1026
Y+P +GK W +LE EA
Sbjct: 937 DSDDSDAYDPEEEDASAGSGSESDEDESEGEETESDDDDEGSLDSDESEGKDWSDLEEEA 996
Query: 1027 SYADREKGADSDSED-ERKRRKMKAFGKARAPEK 1059
+ AD+ + + S D +RKR G + K
Sbjct: 997 ANADKRREVEEPSRDRDRKRPHSSKSGPSHKRRK 1030
>CGD|CAL0005222 [details] [associations]
symbol:CDC68 species:5476 "Candida albicans" [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IGI] [GO:0008023 "transcription elongation factor complex"
evidence=IGI] [GO:0032784 "regulation of DNA-dependent
transcription, elongation" evidence=IGI] [GO:0031298 "replication
fork protection complex" evidence=IEA] [GO:0005816 "spindle pole
body" evidence=IEA] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=IEA] [GO:0035101 "FACT complex" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0060261 "positive
regulation of transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0034401 "regulation of transcription by
chromatin organization" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IEA] [GO:0034724 "DNA replication-independent nucleosome
organization" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
InterPro:IPR000994 Pfam:PF00557 CGD:CAL0005222 GO:GO:0005694
GO:GO:0006260 GO:GO:0006281 GO:GO:0006368 Gene3D:3.90.230.10
SUPFAM:SSF55920 GO:GO:0008023 GO:GO:0032784 EMBL:AACQ01000084
EMBL:AACQ01000083 InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5406
InterPro:IPR013953 Pfam:PF08644 EMBL:AF253047 RefSeq:XP_715540.1
RefSeq:XP_715596.1 ProteinModelPortal:Q5A1D5 STRING:Q5A1D5
GeneID:3642741 GeneID:3642787 KEGG:cal:CaO19.10402
KEGG:cal:CaO19.2884 Uniprot:Q5A1D5
Length = 1060
Score = 839 (300.4 bits), Expect = 1.0e-137, Sum P(3) = 1.0e-137
Identities = 187/489 (38%), Positives = 284/489 (58%)
Query: 486 KATLRSDH---QEMSKEELRRQHQAELARQKNEETARRLAGGGSSTADNRGSVKTIGDLV 542
K+ LR ++ + + E+LR++ Q +L ++ +E R + ++ AD+ +
Sbjct: 499 KSKLRHENTNADDANSEKLRQEIQIKLHEKRLQEGLARFSKADATDADDFKPI--FKKYE 556
Query: 543 AYKNVNDLPPP-RDLMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRSCYIRII 601
+Y + +P DL I +D KN+ I+LPI G VPFH+ + KS SQ + Y+R+
Sbjct: 557 SYVRESQIPNSVNDLKIHIDYKNQTIILPISGRPVPFHINSYKS-GSQNEEGDFTYLRLN 615
Query: 602 FNVPGTSFTPHDSNSLKFQGS---IYLKEVSLRSKDSRHISEVVQQIKTLRRQVTSRESE 658
FN PG L ++ S +L+ +++RS+D + + +V + I+ L++ RE E
Sbjct: 616 FNSPGAGGNVTKKQELPYEDSPDNSFLRSITIRSRDRQRMVDVYKAIQDLKKDSVKREQE 675
Query: 659 RAERATLVTQEKL-QLASAKFKPLKLFDLWIRPPFGGRGRKLTGSLEAHTNGFRY----- 712
+ + A ++TQ L +L ++ K KL +++IRP +K+ G L+ H NG RY
Sbjct: 676 KKQMADVITQANLIELKGSRVK--KLNNVFIRPT--PDTKKIGGVLQIHENGLRYQSQPQ 731
Query: 713 --STSRPDERVDVMYGNIKHAFFQPAEREMITLLHFHLHNHIMVGNKKTKDVQFYIEVMD 770
S + D+RVDV++ NIKH FFQP + E+I L+H HL N IM+G +KT DVQFY E D
Sbjct: 732 SQSNFKNDQRVDVLFSNIKHLFFQPCKDELIVLIHCHLKNPIMIGKRKTFDVQFYREASD 791
Query: 771 VVQTLGGGKRSAY---DPDEVEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKAFDLE 827
+ GG++ Y D DE+++EQ ER RK ++ +F+ F + D DL
Sbjct: 792 MAFDETGGRKRKYRYGDEDELQQEQEERRRKALLDKEFKGFAELIAD----SSHGMVDL- 846
Query: 828 FDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFD 887
D P RELGF GVP ++S VPT CLV+LI+ P++V+TL EIEI +LERV G KNFD
Sbjct: 847 -DIPFRELGFQGVPFRSSVLCVPTRDCLVQLIDPPYLVVTLEEIEIAHLERVQFGLKNFD 905
Query: 888 MTIVFKDFKRDVLRIDSIPSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKF 947
+ VFKDF + V+ I++IP L+ +K WL D+ E ++NLNW I+KT+ DP +F
Sbjct: 906 LVFVFKDFNKPVVHINTIPVELLEDVKSWLTDVDIPISEGQMNLNWVQIMKTVLADPYQF 965
Query: 948 IEDGGWEFL 956
DGGW FL
Sbjct: 966 FIDGGWAFL 974
Score = 484 (175.4 bits), Expect = 1.0e-137, Sum P(3) = 1.0e-137
Identities = 158/529 (29%), Positives = 253/529 (47%)
Query: 27 INLDN--FSKRLKMLYSHWTEHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGYE 84
+N+D F KRL + T +N AL + S+D Y KS+ L WL+GYE
Sbjct: 4 VNIDAGLFYKRLSIFQKQLTANNIP-----QALIIVGAR-SDDNTYKKSTVLQNWLLGYE 57
Query: 85 FPETIMVFLKKQIHFLCSQKKASLLEVIKKSAKEAVGIEVVIHVKGKTDDGSGLMDKIFG 144
F T + K+ F+ S+ K+ L+ + + V E+ I K + L K+
Sbjct: 58 FIHTAIYITDKKCIFITSEGKSKHLKHLTNQKPDLV--ELWIRTKD-VEHNKQLFIKLLE 114
Query: 145 AVNDQSKSGGQ--NSPVVGHISREAPEGKLLETWNEKLKKAN-FALS--DVSNGFSDLFA 199
+ G+ G E + + N N ALS D++ S A
Sbjct: 115 TMTKLDSKYGKILKDKYDGKFIDEWNQILNDDNNNNNNNTTNDHALSAVDLAVTVSQALA 174
Query: 200 IKDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILEPA-RIK 258
+KD E N K A+ S +M FV + ++D+EKK+++S L D+ E I +K
Sbjct: 175 VKDSEEFNNTKIASNASVVMMDTFVNDMMI-IVDDEKKITNSQLTDQIEDKIENNKWYLK 233
Query: 259 VKL-----------KAENVDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGS 307
KL E ++ CY PI QSGG++DLKPSA S D L + VI+ ++G
Sbjct: 234 TKLGKNLLQSIKDFDPEYLEYCYSPIIQSGGDYDLKPSAVSTDKPLIGEG--VILSSIGL 291
Query: 308 RYNSYCSNVARTFLIDANTVQSKAYEVLLKAHEAAI-SALKSGNKVSAAYKAASTVVEKD 366
RY SYCSN+ARTFLID + Y+ LL+ + + + LK G + Y+ ++K+
Sbjct: 292 RYKSYCSNIARTFLIDPTSEMETNYDFLLQLQKYIVDNLLKDGVPANKVYQDTIDYIKKE 351
Query: 367 APELAANLTRNAGTGIGLEFRESGLSLNAKN-DRILKAGMVFNVSLGFQNLQTE--NKNP 423
P+L + T+N G +G+EFR+S LNAK DR L G + ++++GF NL + +KN
Sbjct: 352 RPDLVNHFTKNCGWLLGMEFRDSTFILNAKTTDRKLTTGQIISLTIGFNNLSNDKNDKND 411
Query: 424 KT----------QKFSVLLADTVIVGEKVPDIVTSKSSKAVKDVAYSFNEDDEEEEQPKV 473
K Q +++LL DT+ + + I+ + SK +++SFN+D+E +++
Sbjct: 412 KNDNKTNHQKNKQTYALLLTDTIKITDD-SSILLTNYSKDRAAISFSFNDDNETQKENNN 470
Query: 474 KAEVKGGEPTLSKAT-LRSDHQEMSKE-ELRRQHQAELARQKNEETARR 520
+ G S T L+ + E + + + +H+ A N E R+
Sbjct: 471 NNNKRPGLSQTSNTTGLKLESTENTAILKSKLRHENTNADDANSEKLRQ 519
Score = 61 (26.5 bits), Expect = 1.0e-137, Sum P(3) = 1.0e-137
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 1016 GKTWEELEREASYADREKGAD 1036
G+ W+ LER+A+ ADR G D
Sbjct: 1040 GEDWDALERKAAKADRNSGFD 1060
Score = 38 (18.4 bits), Expect = 2.7e-135, Sum P(3) = 2.7e-135
Identities = 9/30 (30%), Positives = 11/30 (36%)
Query: 1034 GADSDSEDERKRRKMKAFGKARAPEKRNPG 1063
G D D +D A + A RN G
Sbjct: 1029 GDDDDDDDSESGEDWDALERKAAKADRNSG 1058
>UNIPROTKB|Q5A1D5 [details] [associations]
symbol:SPT16 "FACT complex subunit SPT16" species:237561
"Candida albicans SC5314" [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IGI] [GO:0008023
"transcription elongation factor complex" evidence=IGI] [GO:0032784
"regulation of DNA-dependent transcription, elongation"
evidence=IGI] InterPro:IPR000994 Pfam:PF00557 CGD:CAL0005222
GO:GO:0005694 GO:GO:0006260 GO:GO:0006281 GO:GO:0006368
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0008023 GO:GO:0032784
EMBL:AACQ01000084 EMBL:AACQ01000083 InterPro:IPR013719 Pfam:PF08512
eggNOG:COG5406 InterPro:IPR013953 Pfam:PF08644 EMBL:AF253047
RefSeq:XP_715540.1 RefSeq:XP_715596.1 ProteinModelPortal:Q5A1D5
STRING:Q5A1D5 GeneID:3642741 GeneID:3642787 KEGG:cal:CaO19.10402
KEGG:cal:CaO19.2884 Uniprot:Q5A1D5
Length = 1060
Score = 839 (300.4 bits), Expect = 1.0e-137, Sum P(3) = 1.0e-137
Identities = 187/489 (38%), Positives = 284/489 (58%)
Query: 486 KATLRSDH---QEMSKEELRRQHQAELARQKNEETARRLAGGGSSTADNRGSVKTIGDLV 542
K+ LR ++ + + E+LR++ Q +L ++ +E R + ++ AD+ +
Sbjct: 499 KSKLRHENTNADDANSEKLRQEIQIKLHEKRLQEGLARFSKADATDADDFKPI--FKKYE 556
Query: 543 AYKNVNDLPPP-RDLMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRSCYIRII 601
+Y + +P DL I +D KN+ I+LPI G VPFH+ + KS SQ + Y+R+
Sbjct: 557 SYVRESQIPNSVNDLKIHIDYKNQTIILPISGRPVPFHINSYKS-GSQNEEGDFTYLRLN 615
Query: 602 FNVPGTSFTPHDSNSLKFQGS---IYLKEVSLRSKDSRHISEVVQQIKTLRRQVTSRESE 658
FN PG L ++ S +L+ +++RS+D + + +V + I+ L++ RE E
Sbjct: 616 FNSPGAGGNVTKKQELPYEDSPDNSFLRSITIRSRDRQRMVDVYKAIQDLKKDSVKREQE 675
Query: 659 RAERATLVTQEKL-QLASAKFKPLKLFDLWIRPPFGGRGRKLTGSLEAHTNGFRY----- 712
+ + A ++TQ L +L ++ K KL +++IRP +K+ G L+ H NG RY
Sbjct: 676 KKQMADVITQANLIELKGSRVK--KLNNVFIRPT--PDTKKIGGVLQIHENGLRYQSQPQ 731
Query: 713 --STSRPDERVDVMYGNIKHAFFQPAEREMITLLHFHLHNHIMVGNKKTKDVQFYIEVMD 770
S + D+RVDV++ NIKH FFQP + E+I L+H HL N IM+G +KT DVQFY E D
Sbjct: 732 SQSNFKNDQRVDVLFSNIKHLFFQPCKDELIVLIHCHLKNPIMIGKRKTFDVQFYREASD 791
Query: 771 VVQTLGGGKRSAY---DPDEVEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKAFDLE 827
+ GG++ Y D DE+++EQ ER RK ++ +F+ F + D DL
Sbjct: 792 MAFDETGGRKRKYRYGDEDELQQEQEERRRKALLDKEFKGFAELIAD----SSHGMVDL- 846
Query: 828 FDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFD 887
D P RELGF GVP ++S VPT CLV+LI+ P++V+TL EIEI +LERV G KNFD
Sbjct: 847 -DIPFRELGFQGVPFRSSVLCVPTRDCLVQLIDPPYLVVTLEEIEIAHLERVQFGLKNFD 905
Query: 888 MTIVFKDFKRDVLRIDSIPSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKF 947
+ VFKDF + V+ I++IP L+ +K WL D+ E ++NLNW I+KT+ DP +F
Sbjct: 906 LVFVFKDFNKPVVHINTIPVELLEDVKSWLTDVDIPISEGQMNLNWVQIMKTVLADPYQF 965
Query: 948 IEDGGWEFL 956
DGGW FL
Sbjct: 966 FIDGGWAFL 974
Score = 484 (175.4 bits), Expect = 1.0e-137, Sum P(3) = 1.0e-137
Identities = 158/529 (29%), Positives = 253/529 (47%)
Query: 27 INLDN--FSKRLKMLYSHWTEHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGYE 84
+N+D F KRL + T +N AL + S+D Y KS+ L WL+GYE
Sbjct: 4 VNIDAGLFYKRLSIFQKQLTANNIP-----QALIIVGAR-SDDNTYKKSTVLQNWLLGYE 57
Query: 85 FPETIMVFLKKQIHFLCSQKKASLLEVIKKSAKEAVGIEVVIHVKGKTDDGSGLMDKIFG 144
F T + K+ F+ S+ K+ L+ + + V E+ I K + L K+
Sbjct: 58 FIHTAIYITDKKCIFITSEGKSKHLKHLTNQKPDLV--ELWIRTKD-VEHNKQLFIKLLE 114
Query: 145 AVNDQSKSGGQ--NSPVVGHISREAPEGKLLETWNEKLKKAN-FALS--DVSNGFSDLFA 199
+ G+ G E + + N N ALS D++ S A
Sbjct: 115 TMTKLDSKYGKILKDKYDGKFIDEWNQILNDDNNNNNNNTTNDHALSAVDLAVTVSQALA 174
Query: 200 IKDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILEPA-RIK 258
+KD E N K A+ S +M FV + ++D+EKK+++S L D+ E I +K
Sbjct: 175 VKDSEEFNNTKIASNASVVMMDTFVNDMMI-IVDDEKKITNSQLTDQIEDKIENNKWYLK 233
Query: 259 VKL-----------KAENVDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGS 307
KL E ++ CY PI QSGG++DLKPSA S D L + VI+ ++G
Sbjct: 234 TKLGKNLLQSIKDFDPEYLEYCYSPIIQSGGDYDLKPSAVSTDKPLIGEG--VILSSIGL 291
Query: 308 RYNSYCSNVARTFLIDANTVQSKAYEVLLKAHEAAI-SALKSGNKVSAAYKAASTVVEKD 366
RY SYCSN+ARTFLID + Y+ LL+ + + + LK G + Y+ ++K+
Sbjct: 292 RYKSYCSNIARTFLIDPTSEMETNYDFLLQLQKYIVDNLLKDGVPANKVYQDTIDYIKKE 351
Query: 367 APELAANLTRNAGTGIGLEFRESGLSLNAKN-DRILKAGMVFNVSLGFQNLQTE--NKNP 423
P+L + T+N G +G+EFR+S LNAK DR L G + ++++GF NL + +KN
Sbjct: 352 RPDLVNHFTKNCGWLLGMEFRDSTFILNAKTTDRKLTTGQIISLTIGFNNLSNDKNDKND 411
Query: 424 KT----------QKFSVLLADTVIVGEKVPDIVTSKSSKAVKDVAYSFNEDDEEEEQPKV 473
K Q +++LL DT+ + + I+ + SK +++SFN+D+E +++
Sbjct: 412 KNDNKTNHQKNKQTYALLLTDTIKITDD-SSILLTNYSKDRAAISFSFNDDNETQKENNN 470
Query: 474 KAEVKGGEPTLSKAT-LRSDHQEMSKE-ELRRQHQAELARQKNEETARR 520
+ G S T L+ + E + + + +H+ A N E R+
Sbjct: 471 NNNKRPGLSQTSNTTGLKLESTENTAILKSKLRHENTNADDANSEKLRQ 519
Score = 61 (26.5 bits), Expect = 1.0e-137, Sum P(3) = 1.0e-137
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 1016 GKTWEELEREASYADREKGAD 1036
G+ W+ LER+A+ ADR G D
Sbjct: 1040 GEDWDALERKAAKADRNSGFD 1060
Score = 38 (18.4 bits), Expect = 2.7e-135, Sum P(3) = 2.7e-135
Identities = 9/30 (30%), Positives = 11/30 (36%)
Query: 1034 GADSDSEDERKRRKMKAFGKARAPEKRNPG 1063
G D D +D A + A RN G
Sbjct: 1029 GDDDDDDDSESGEDWDALERKAAKADRNSG 1058
>TAIR|locus:2139217 [details] [associations]
symbol:GTC2 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002687 InterPro:IPR013719
Pfam:PF08512 InterPro:IPR013953 Pfam:PF08644 IPI:IPI00536333
RefSeq:NP_192805.2 UniGene:At.54263 EnsemblPlants:AT4G10670.1
GeneID:826660 KEGG:ath:AT4G10670 ArrayExpress:F4JME7 Uniprot:F4JME7
Length = 343
Score = 1260 (448.6 bits), Expect = 2.2e-128, P = 2.2e-128
Identities = 244/353 (69%), Positives = 291/353 (82%)
Query: 557 MIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRSCYIRIIFNVPGTSFTPHDSNS 616
MI VD K++ +LLPIYG MVPF+V T+++V Q+T IR+IFNVPGT P+DS
Sbjct: 1 MITVDHKSDTVLLPIYGRMVPFNVTTIRTVLGNQNT-----IRVIFNVPGTPLNPNDS-- 53
Query: 617 LKFQGSIYLKEVSLRSKDSRHISEVVQQIKTLRRQVTSRESERAERATLVTQEKLQLASA 676
LK + +IYLKEVS R+KDSRH S+VVQQ+K+LRR+V +RESERAER +LV QEKLQ+
Sbjct: 54 LKNKDAIYLKEVSFRTKDSRHSSDVVQQVKSLRRKVMARESERAERTSLVNQEKLQIVRN 113
Query: 677 KFKPLKLFDLWIRPPFGGRGRKLTGSLEAHTNGFRYSTSRPDERVDVMYGNIKHAFFQPA 736
KPL L +LWIRPPF GR +K G+LEAH NGFRYST+ +ERVDV++ NIKHAFFQPA
Sbjct: 114 NSKPLSLSNLWIRPPFSGR-KKNRGTLEAHVNGFRYSTT--NERVDVLFANIKHAFFQPA 170
Query: 737 EREMITLLHFHLHNHIMVGNKKTKDVQFYIEVMDVVQTLGGGKRS-AYDPDEVEEEQRER 795
E+EM TLLHFHLHNHIMVG KKTKDVQFY+EVMDVVQ+LGG +RS AYD DE+ EEQRER
Sbjct: 171 EKEMTTLLHFHLHNHIMVGTKKTKDVQFYVEVMDVVQSLGGRRRSSAYDADEIVEEQRER 230
Query: 796 ARKNKINMDFQNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFHGVPHKASAFIVPTSSCL 855
RKNKINMDF +F N+VND+W PQF + LEFDQPLRE GF+GVPHK S FI+PTSSCL
Sbjct: 231 DRKNKINMDFNHFANQVNDMWQLPQFASLSLEFDQPLREFGFNGVPHKTSTFIIPTSSCL 290
Query: 856 VELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSS 908
VEL E+PF+V+ LSEIEIVNLERVG GQK+FDM I+FKD K+DVLR+DS+P+S
Sbjct: 291 VELTESPFLVVCLSEIEIVNLERVGFGQKSFDMAIIFKDLKKDVLRVDSVPTS 343
>SGD|S000003175 [details] [associations]
symbol:SPT16 "Subunit of the heterodimeric FACT complex
(Spt16p-Pob3p), which assoc" species:4932 "Saccharomyces
cerevisiae" [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IPI]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IDA]
[GO:0060261 "positive regulation of transcription initiation from
RNA polymerase II promoter" evidence=IGI;IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005658 "alpha DNA polymerase:primase complex"
evidence=IDA] [GO:0031298 "replication fork protection complex"
evidence=IDA] [GO:0035101 "FACT complex" evidence=IGI;IPI]
[GO:0008023 "transcription elongation factor complex" evidence=IPI]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IPI] [GO:0034401 "regulation of transcription by
chromatin organization" evidence=IMP] [GO:0006334 "nucleosome
assembly" evidence=IDA] [GO:0009987 "cellular process"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] [GO:0034724 "DNA
replication-independent nucleosome organization" evidence=IDA]
InterPro:IPR000994 Pfam:PF00557 SGD:S000003175 EMBL:BK006941
GO:GO:0006281 GO:GO:0006261 GO:GO:0000790 GO:GO:0034401
GO:GO:0006368 GO:GO:0045899 EMBL:M27174 Gene3D:3.90.230.10
SUPFAM:SSF55920 GO:GO:0006334 GO:GO:0031298 GO:GO:0060261
GO:GO:0035101 InterPro:IPR013719 Pfam:PF08512 GO:GO:0034724
eggNOG:COG5406 HOGENOM:HOG000209079 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 OrthoDB:EOG4QC4DF EMBL:M73533
EMBL:Z72729 PIR:S18512 RefSeq:NP_011308.1 PDB:3BIP PDB:3BIQ
PDB:3BIT PDBsum:3BIP PDBsum:3BIQ PDBsum:3BIT
ProteinModelPortal:P32558 SMR:P32558 DIP:DIP-2546N IntAct:P32558
MINT:MINT-427889 STRING:P32558 PaxDb:P32558 PeptideAtlas:P32558
EnsemblFungi:YGL207W GeneID:852665 KEGG:sce:YGL207W CYGD:YGL207w
OMA:THEAVIS EvolutionaryTrace:P32558 NextBio:971957
Genevestigator:P32558 GermOnline:YGL207W Uniprot:P32558
Length = 1035
Score = 1165 (415.2 bits), Expect = 2.6e-118, P = 2.6e-118
Identities = 292/887 (32%), Positives = 453/887 (51%)
Query: 172 LLETWNEKLKKANFALSDVSNGFSDLFAIKDDTELTNIKKAAFLSSSVMKQFVVPKLEKV 231
L + W K LS S G SD F D + +A + + K+E
Sbjct: 169 LSKVWEVKDVNEQAFLSVSSKG-SDKFM---DLLSNEMVRAVDEELKITNAKLSDKIENK 224
Query: 232 IDEEKKVSHSSLMDETEKAILEPARIKVKLKAENVDICYPPIFQSGGEFDLKPSASSNDN 291
ID+ K + S + + L P K + +D Y PI QSG +FDL+ SA S ++
Sbjct: 225 IDDVKFLKQLS----PDLSALCPPNYKFNF--DLLDWTYSPIIQSGKKFDLRVSARSTND 278
Query: 292 YLYYDSTSVIICAVGSRYNSYCSNVARTFLIDANTVQSKAYEVLLKAH-EAAISALKSGN 350
LY I+ + G RYN+YCSN+ RTFLID + + Y+ LL E + LK G
Sbjct: 279 QLY--GNGCILASCGIRYNNYCSNITRTFLIDPSEEMANNYDFLLTLQKEIVTNILKPGR 336
Query: 351 KVSAAYKAASTVVEKDAPELAANLTRNAGTGIGLEFRESGLSLNAKND-RILKAGMVFNV 409
Y++ +EK PEL N T+N G+ IGLEFR+S LN KND R ++ G FN+
Sbjct: 337 TPKEVYESVIEYIEKTKPELVPNFTKNIGSLIGLEFRDSNFILNVKNDYRKIQRGDCFNI 396
Query: 410 SLGFQNLQTENKNPKTQKFSVLLADTVIV--GEKVPDIVTSKSSKAVKDVAYSFNEDDEE 467
S GF NL+ +++ LADTV + E P + +KA +++ FN ++E+
Sbjct: 397 SFGFNNLKDSQS---ANNYALQLADTVQIPLDETEPPRFLTNYTKAKSQISFYFNNEEED 453
Query: 468 EEQPKVKAEVK-GGEPTLSKATLRSD--------HQEMSKEELRRQHQAELARQKNEETA 518
+ K K +P + LR+ ++ KE++R+++Q +L + +
Sbjct: 454 NNKKKSSPATKVPSKPDRNSKILRTKLRGEARGGAEDAQKEQIRKENQKKLHEKLEKNGL 513
Query: 519 RRLAGGGSSTADNRGSVKTIGDLVAYKNVNDLPPP-RDLMIQVDQKNEAILLPIYGSMVP 577
R + ++ D+ + +Y + LP RDL I VD K++ I+LPIYG VP
Sbjct: 514 LRFSAADANGPDSEPR-QYFKKYESYVRDSQLPTNIRDLRIHVDWKSQTIILPIYGRPVP 572
Query: 578 FHVATVKSVSSQQDTNRSCYIRIIFNVPGTSF-TPHDSNSLKFQGSI---YLKEVSLRSK 633
FH+ + K+ S+ + Y+R+ FN PG+S L ++ S +++ ++LRSK
Sbjct: 573 FHINSYKN-GSKNEEGEYTYLRLNFNSPGSSGGISKKVEELPYEESADNQFVRSITLRSK 631
Query: 634 DSRHISEVVQQIKTLRRQVTSRESERAERATLVTQEKLQLASAKFKPLKLFDLWIRPPFG 693
D +SE +QI L+++ T RE ER A +V Q+KL + + + +L +++RP
Sbjct: 632 DGDRMSETFKQIADLKKEATKREQERKALADVVQQDKL-IENKTGRTKRLDQIFVRP--N 688
Query: 694 GRGRKLTGSLEAHTNGFRY-STSRPDERVDVMYGNIKHAFFQPAEREMITLLHFHLHNHI 752
+++ ++ H NG R+ S R D R+D+++ NIK+ FQ + E+I ++H HL N I
Sbjct: 689 PDTKRVPSTVFIHENGIRFQSPLRTDSRIDILFSNIKNLIFQSCKGELIVVIHIHLKNPI 748
Query: 753 MVGNKKTKDVQFYIEVMDV-VQTLGGGKRSA-----Y-DPDEVEEEQRERARKNKINMDF 805
++G KK +DVQFY E D+ V GGG+R Y D DE+E+EQ ER ++ ++ +F
Sbjct: 749 LMGKKKIQDVQFYREASDMSVDETGGGRRGQSRFRRYGDEDELEQEQEERRKRAALDKEF 808
Query: 806 QNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFVV 865
+ F + + + L + R+LGF GVP++++ F +PT+ CLV+LIE PF+V
Sbjct: 809 KYFADAIAEASNGL------LTVENTFRDLGFQGVPNRSAVFCMPTTDCLVQLIEPPFLV 862
Query: 866 ITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSSSLDGIKEWLDTTDLKYY 925
I L E+EI LERV G KNFDM V+KDF + V I+++P SLD +K+WL D+ Y
Sbjct: 863 INLEEVEICILERVQFGLKNFDMVFVYKDFNKPVTHINTVPIESLDFLKQWLTDMDIPYT 922
Query: 926 ESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEAXXXXXXXXXXXXXGYEPXXXXXXXX 985
S +NLNW I+K++ DDP +F DGGW FL + YE
Sbjct: 923 VSTINLNWATIMKSLQDDPYQFFLDGGWNFLATGSDDEASDESEEEVSEYEASEDDVSDE 982
Query: 986 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXK-GKTWEELEREASYADR 1031
+ G+ W+ELE++A+ ADR
Sbjct: 983 SAFSEDEEGSEVDDDISGDESEDYTGDESEEGEDWDELEKKAARADR 1029
Score = 535 (193.4 bits), Expect = 4.1e-48, P = 4.1e-48
Identities = 153/532 (28%), Positives = 257/532 (48%)
Query: 27 INLDNFSKRLKMLYSHWTEHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGYEFP 86
I+ D F KR+++LYS + E G N+L + + Y K++ L+ WL+ YEFP
Sbjct: 6 IDFDVFKKRIELLYSKYNEFE----GSPNSLLFVLGSSNAENPYQKTTILHNWLLSYEFP 61
Query: 87 ETIMVFLKKQIHFLCSQKKASLLEVIKKSAKEAVGIEVVIHVKGKTDDGSGLMDKIFGAV 146
T++ + ++ + S KA L+ K+ ++ + + + + L K+F V
Sbjct: 62 ATLIALVPGKVIIITSSAKAKHLQKAIDLFKDPES-KITLELWQRNNKEPELNKKLFDDV 120
Query: 147 NDQSKSGGQNSPVVGHISREAPEGKLLETWN---EKLKKAN-FALSDVSNGFSDLFAIKD 202
S G+ VG +++ +GK + WN E K N F + D+S G S ++ +KD
Sbjct: 121 IALINSAGKT---VGIPEKDSYQGKFMTEWNPVWEAAVKENEFNVIDISLGLSKVWEVKD 177
Query: 203 DTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILEPARIK---- 258
E + ++ S M + ++ + +DEE K++++ L D+ E I + +K
Sbjct: 178 VNEQAFLSVSSKGSDKFM-DLLSNEMVRAVDEELKITNAKLSDKIENKIDDVKFLKQLSP 236
Query: 259 ---------VKLKAENVDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRY 309
K + +D Y PI QSG +FDL+ SA S ++ LY I+ + G RY
Sbjct: 237 DLSALCPPNYKFNFDLLDWTYSPIIQSGKKFDLRVSARSTNDQLY--GNGCILASCGIRY 294
Query: 310 NSYCSNVARTFLIDANTVQSKAYEVLLKAH-EAAISALKSGNKVSAAYKAASTVVEKDAP 368
N+YCSN+ RTFLID + + Y+ LL E + LK G Y++ +EK P
Sbjct: 295 NNYCSNITRTFLIDPSEEMANNYDFLLTLQKEIVTNILKPGRTPKEVYESVIEYIEKTKP 354
Query: 369 ELAANLTRNAGTGIGLEFRESGLSLNAKND-RILKAGMVFNVSLGFQNLQTENKNPKTQK 427
EL N T+N G+ IGLEFR+S LN KND R ++ G FN+S GF NL+
Sbjct: 355 ELVPNFTKNIGSLIGLEFRDSNFILNVKNDYRKIQRGDCFNISFGFNNLKDSQS---ANN 411
Query: 428 FSVLLADTVIV--GEKVPDIVTSKSSKAVKDVAYSFNEDDEEEEQPKVKAEVK-GGEPTL 484
+++ LADTV + E P + +KA +++ FN ++E+ + K K +P
Sbjct: 412 YALQLADTVQIPLDETEPPRFLTNYTKAKSQISFYFNNEEEDNNKKKSSPATKVPSKPDR 471
Query: 485 SKATLRSDHQEMSKEELRRQHQAELARQKNEETARRLAGGGS---STADNRG 533
+ LR+ + ++ + ++ ++ ++ +L G S AD G
Sbjct: 472 NSKILRTKLRGEARGGAEDAQKEQIRKENQKKLHEKLEKNGLLRFSAADANG 523
>WB|WBGene00018852 [details] [associations]
symbol:F55A3.7 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0001703 "gastrulation with mouth forming first" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0006997 "nucleus organization" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] InterPro:IPR000994 GO:GO:0009792 GO:GO:0018996
GO:GO:0000910 Gene3D:3.90.230.10 GO:GO:0006997 GO:GO:0001703
EMBL:FO080793 eggNOG:COG5406 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 RefSeq:NP_492820.3
ProteinModelPortal:Q9N5S0 SMR:Q9N5S0 STRING:Q9N5S0 PaxDb:Q9N5S0
EnsemblMetazoa:F55A3.7 GeneID:186272 KEGG:cel:CELE_F55A3.7
UCSC:F55A3.7 CTD:186272 WormBase:F55A3.7 InParanoid:Q9N5S0
NextBio:931258 Uniprot:Q9N5S0
Length = 450
Score = 266 (98.7 bits), Expect = 5.5e-39, Sum P(2) = 5.5e-39
Identities = 70/185 (37%), Positives = 111/185 (60%)
Query: 556 LMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRSCYIRIIFNVPGTSFTPHDSN 615
++I VD+K +++++PI+G VPFH++ +K+ S + + + Y+RI F PG+ DS
Sbjct: 262 MLIFVDRKYDSVVVPIFGIPVPFHISMIKNCSQSVEGDLT-YLRINFATPGSQ-VGKDSG 319
Query: 616 SLKFQGSIYLKEVSLRS---KD--------SRHISEVVQQIKTLRRQVTSRESERAERAT 664
+ Y+KE + R+ KD SR++S + IK ++++ S E+E+ E+
Sbjct: 320 QFPHPLAHYMKEFTFRASNIKDHHSDSTAPSRNLSTAFRFIKEMQKRFKSEEAEQREKEG 379
Query: 665 LVTQEKLQLASAKFKPLKLFDLWIRPPFGGRGRKLTGSLEAHTNGFRYSTSRPDERVDVM 724
V Q+KL L+ K P KL +L I P + +TGSLEAHTNGFRY++ R D R+DV+
Sbjct: 380 AVKQDKLILSQNKLNP-KL-NLLICPNI--IQKLITGSLEAHTNGFRYTSLRGD-RIDVL 434
Query: 725 YGNIK 729
Y NIK
Sbjct: 435 YNNIK 439
Score = 228 (85.3 bits), Expect = 5.5e-39, Sum P(2) = 5.5e-39
Identities = 59/208 (28%), Positives = 106/208 (50%)
Query: 67 DLRYLKSSALNVWLVGYEFPETIMVFLKKQIHFLCSQKKASLLEVIKKSAKEAVGIEVVI 126
D Y K+S L WL G+E +T+++ L I+ L S +K + + + + V
Sbjct: 27 DNPYTKTSELFTWLFGHEIADTVLLLLNDHIYILGSNRKVEFFGSVTGDNQSSGKVPTVS 86
Query: 127 HV-KGKTDDGSGLMDKIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKLKKANF 185
+ + KTD +G +K+ D KS G + VG+ +E + + +WN+ L++
Sbjct: 87 TLLRDKTDKDAGNFEKLI----DHIKSAGGD---VGNFVKEKFSSEFVSSWNKALEEGGV 139
Query: 186 ALSDVSNGFSDLFAIKDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMD 245
+DV+ F+ LFA+KDD E+ I+K+A +++ +E + D EK+V HS L +
Sbjct: 140 NKNDVTLAFTHLFAVKDDKEMDLIRKSAQATTASWTAARARYVE-ISDNEKRVRHSVLSN 198
Query: 246 ETEKAILEPARIKVKLKAENVDICYPPI 273
+ A ++ ++++ L D CY PI
Sbjct: 199 QFA-AFMKDSKVQQALAKYEADTCYDPI 225
>UNIPROTKB|Q3ACM8 [details] [associations]
symbol:CHY_1272 "Putative proline dipeptidase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006508 "proteolysis" evidence=ISS] InterPro:IPR000587
InterPro:IPR000994 Pfam:PF00557 Pfam:PF01321 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006508 GO:GO:0016787
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987 eggNOG:COG0006
HOGENOM:HOG000008760 ProtClustDB:CLSK745998 RefSeq:YP_360106.1
ProteinModelPortal:Q3ACM8 STRING:Q3ACM8 GeneID:3726321
KEGG:chy:CHY_1272 PATRIC:21275681 OMA:RIGFERY
BioCyc:CHYD246194:GJCN-1271-MONOMER Uniprot:Q3ACM8
Length = 367
Score = 143 (55.4 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 55/211 (26%), Positives = 94/211 (44%)
Query: 247 TEKAILEPARIKVKLKAENVDICYPPIFQSGGEFDLK-PSASSNDNYLYYDSTSVIICAV 305
+E +L A + LKA + + + P SG L P AS+ + V++ +
Sbjct: 171 SELDVLAEAEYAM-LKAGSNGLPFRPQIVSGNRCLLTHPHASTK----LIEEGEVVVVHL 225
Query: 306 GSRYNSYCSNVARTFLI-DANTVQSKAYEVLLKAHEAAISALKSGNKVSAAYKAASTVVE 364
G+ YN YC+ + RT + + + K + +LL+A E AI+AL+ G+K +AA V+
Sbjct: 226 GATYNGYCAKMCRTVAVGEISAAHEKVFNLLLEAQEKAIAALRPGSKAWEVDEAAREVIR 285
Query: 365 KDAPELAANLTRNAGTGIGLEFRESGLSLNAKNDRILKAGMVFNVSLGFQNLQTENKNPK 424
+ E G G+GL E + I++ GMV ++ L + P+
Sbjct: 286 RAGFE--EYYLDVIGYGVGLRQSEFYPIIGKGRQDIIEVGMVVDLLLP-TIYHRDVGGPR 342
Query: 425 TQKFSVLLADTVIVGEKVPDIVTSKSSKAVK 455
+ D + VGE +I+T K +K
Sbjct: 343 -------ITDVIYVGENENEILTGYPRKLIK 366
Score = 54 (24.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 25/108 (23%), Positives = 50/108 (46%)
Query: 146 VNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKLKKANFALSDVSNGFSDLFAIKDDTE 205
V ++ K+ G +P +G P + + ++NF D ++ F + A+K+ E
Sbjct: 88 VVERIKAYGFRAPRIGFERYFVPFA-FYDVLRQNFPESNFV--DAADLFYRVRAVKEPNE 144
Query: 206 LTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILE 253
+ I++AAF M+ + K I + +S ++ E E A+L+
Sbjct: 145 VEMIRRAAFAVCKGMEAAI-----KTI--KPGISELDVLAEAEYAMLK 185
>TIGR_CMR|CHY_1272 [details] [associations]
symbol:CHY_1272 "putative proline dipeptidase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006508 "proteolysis" evidence=ISS] InterPro:IPR000587
InterPro:IPR000994 Pfam:PF00557 Pfam:PF01321 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006508 GO:GO:0016787
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987 eggNOG:COG0006
HOGENOM:HOG000008760 ProtClustDB:CLSK745998 RefSeq:YP_360106.1
ProteinModelPortal:Q3ACM8 STRING:Q3ACM8 GeneID:3726321
KEGG:chy:CHY_1272 PATRIC:21275681 OMA:RIGFERY
BioCyc:CHYD246194:GJCN-1271-MONOMER Uniprot:Q3ACM8
Length = 367
Score = 143 (55.4 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 55/211 (26%), Positives = 94/211 (44%)
Query: 247 TEKAILEPARIKVKLKAENVDICYPPIFQSGGEFDLK-PSASSNDNYLYYDSTSVIICAV 305
+E +L A + LKA + + + P SG L P AS+ + V++ +
Sbjct: 171 SELDVLAEAEYAM-LKAGSNGLPFRPQIVSGNRCLLTHPHASTK----LIEEGEVVVVHL 225
Query: 306 GSRYNSYCSNVARTFLI-DANTVQSKAYEVLLKAHEAAISALKSGNKVSAAYKAASTVVE 364
G+ YN YC+ + RT + + + K + +LL+A E AI+AL+ G+K +AA V+
Sbjct: 226 GATYNGYCAKMCRTVAVGEISAAHEKVFNLLLEAQEKAIAALRPGSKAWEVDEAAREVIR 285
Query: 365 KDAPELAANLTRNAGTGIGLEFRESGLSLNAKNDRILKAGMVFNVSLGFQNLQTENKNPK 424
+ E G G+GL E + I++ GMV ++ L + P+
Sbjct: 286 RAGFE--EYYLDVIGYGVGLRQSEFYPIIGKGRQDIIEVGMVVDLLLP-TIYHRDVGGPR 342
Query: 425 TQKFSVLLADTVIVGEKVPDIVTSKSSKAVK 455
+ D + VGE +I+T K +K
Sbjct: 343 -------ITDVIYVGENENEILTGYPRKLIK 366
Score = 54 (24.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 25/108 (23%), Positives = 50/108 (46%)
Query: 146 VNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKLKKANFALSDVSNGFSDLFAIKDDTE 205
V ++ K+ G +P +G P + + ++NF D ++ F + A+K+ E
Sbjct: 88 VVERIKAYGFRAPRIGFERYFVPFA-FYDVLRQNFPESNFV--DAADLFYRVRAVKEPNE 144
Query: 206 LTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILE 253
+ I++AAF M+ + K I + +S ++ E E A+L+
Sbjct: 145 VEMIRRAAFAVCKGMEAAI-----KTI--KPGISELDVLAEAEYAMLK 185
>TIGR_CMR|DET_0715 [details] [associations]
symbol:DET_0715 "metallopeptidase, M24 family"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0006508
"proteolysis" evidence=ISS] [GO:0008235 "metalloexopeptidase
activity" evidence=ISS] InterPro:IPR000587 InterPro:IPR000994
Pfam:PF00557 Pfam:PF01321 Prosite:PS00491 InterPro:IPR001131
GO:GO:0046872 GO:GO:0016787 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987 eggNOG:COG0006
HOGENOM:HOG000008760 RefSeq:YP_181456.1 ProteinModelPortal:Q3Z8J3
STRING:Q3Z8J3 GeneID:3229936 KEGG:det:DET0715 PATRIC:21608493
OMA:DDYCSDQ ProtClustDB:CLSK837313
BioCyc:DETH243164:GJNF-716-MONOMER Uniprot:Q3Z8J3
Length = 362
Score = 133 (51.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 37/108 (34%), Positives = 58/108 (53%)
Query: 306 GSRYNSYCSNVARTFLID-ANTVQSKAYEVLLKAHEAAISALKSGNKVSAAYKAASTVVE 364
G++ N Y S++ RT L A++ K Y+++L A + AI + SG A A V+E
Sbjct: 223 GAKVNWYASDMTRTVLQGKADSQFKKIYDIVLAAQQKAIDQITSGMTGQEADTIARDVIE 282
Query: 365 KDAPELAANLTRNAGTGIGLEFRESGLSLNAKNDRILKAGMVFNVSLG 412
K AN + G G+GLE E+ L+ ++ IL+ GMVF++ G
Sbjct: 283 KAG--YGANFGHSLGHGVGLEVHEAP-RLSPRSTDILEDGMVFSIEPG 327
>DICTYBASE|DDB_G0282075 [details] [associations]
symbol:xpnpep3 "peptidase M24 family protein"
species:44689 "Dictyostelium discoideum" [GO:0030145 "manganese ion
binding" evidence=IEA] [GO:0009987 "cellular process" evidence=IEA]
[GO:0004177 "aminopeptidase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] InterPro:IPR000994 InterPro:IPR007865
Pfam:PF00557 Pfam:PF05195 SMART:SM01011 dictyBase:DDB_G0282075
GenomeReviews:CM000152_GR GO:GO:0006508 GO:GO:0008237 GO:GO:0004177
GO:GO:0030145 Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987
KO:K01262 eggNOG:COG0006 OMA:VRAMQAC EMBL:AAFI02000044
MEROPS:M24.026 HSSP:P81535 RefSeq:XP_640405.1
ProteinModelPortal:Q54T46 EnsemblProtists:DDB0304432 GeneID:8623360
KEGG:ddi:DDB_G0282075 ProtClustDB:CLSZ2430502 Uniprot:Q54T46
Length = 518
Score = 134 (52.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 98/485 (20%), Positives = 191/485 (39%)
Query: 6 NSTVKPAAGKPS--GNAAANT--YAINLDNFSKRLKML-YSHWTEHNSDLWGDSNALAVA 60
N+T KP G A T Y ++ + +K +KM + E + + + +
Sbjct: 51 NNTNNNKLKKPLSIGQATFETHPYLLDKNEITKGIKMKEFKDRREKLMKNFPIGSVVVIF 110
Query: 61 TPP---VSEDLRYLKSSALNV-WLVGYEFPETIMVFLKKQIHFLCSQKKASLLEVIKKSA 116
TPP +S D+ + N +L G+ PE ++V +K L Q + E +
Sbjct: 111 TPPEPMMSYDIPWSFRQNTNFNYLTGFNEPEAVLVLVKTSE--LDHQSYLFVRE--RNEE 166
Query: 117 KEAVGIEVVIHVKGKTDDGSGLMDKIFGAVNDQSKSGGQNSPVVGHISREAPEGKLL--- 173
KE G G + K FG ++ ++ P++G + + +GKL
Sbjct: 167 KEKWD--------GARCGGENVK-KYFG-IDFGYNLTNRDIPILGKLLKSTTDGKLYCNT 216
Query: 174 ETWNE---KLKK--ANFALSDVSNGFSDLFAIKDDTELTNIKKAAFLSSSVMKQFVVPKL 228
WN+ KL+ N V + + IK D E+ + K+ ++ + + +
Sbjct: 217 TPWNQLSNKLEPFLENIKFYTVESLLQQIRLIKSDAEIKMMLKSGEIAGTSFHETMKYTG 276
Query: 229 EKVIDEEKKVSHSSLMDETEKAILEPARIKVKLKAENVDICYPPIFQSGGEFDLKPSASS 288
K S S L + A E +K K A+ + YPP+ +GG+
Sbjct: 277 TKSSSSSSSSSSSPLNEYQVSAYFEWC-VKDK-GAQRMS--YPPVV-AGGDNGHTLHYIQ 331
Query: 289 NDNYLYYDSTSVIICAVGSRYNSYCSNVARTFLIDAN--TVQSKAYEVLLKAHEAAISAL 346
N+ L Y +++ G Y Y S++ RTF + QS+ Y+ +L ++ I
Sbjct: 332 NNQLLNY--CDLLLMDAGCEYWGYTSDITRTFPVSGKFTEAQSEVYQAVLDVNKKCIELC 389
Query: 347 KSGNKVSAAY-----------KAASTVVEKDAPELAANLTRNAGTGIGLEFRESGLSLNA 395
K G +++ + K + E + + + G +G++ ++ L+
Sbjct: 390 KPGETINSIHLKSVELIQAHLKRLGIINESNPNDYRLYYPHSIGHYLGMDTHDT---LDF 446
Query: 396 KNDRILKAGMVFNVSLGFQNLQTENKNP-KTQKFSVLLADTVIVGE--KVPDIVTSKSSK 452
L+ GM+ + G + ++ P K + S+ + D V++ P ++T + K
Sbjct: 447 DYGVTLEPGMIITIEPGIYISKYDSNVPEKYRGISIRVEDDVVIPNLNNSPLVLTHLAPK 506
Query: 453 AVKDV 457
+ ++
Sbjct: 507 EISEI 511
>UNIPROTKB|Q3AAZ1 [details] [associations]
symbol:pepP "Aminopeptidase P" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0006508
"proteolysis" evidence=ISS] [GO:0008233 "peptidase activity"
evidence=ISS] InterPro:IPR000587 InterPro:IPR000994
InterPro:IPR001714 Pfam:PF00557 Pfam:PF01321 PRINTS:PR00599
Prosite:PS00491 InterPro:IPR001131 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006508 GO:GO:0004177 GO:GO:0008233
GO:GO:0008235 Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987
KO:K01262 eggNOG:COG0006 HOGENOM:HOG000008760 RefSeq:YP_360693.1
ProteinModelPortal:Q3AAZ1 STRING:Q3AAZ1 MEROPS:M24.008
GeneID:3728643 KEGG:chy:CHY_1873 PATRIC:21276841 OMA:HCLRQMA
BioCyc:CHYD246194:GJCN-1872-MONOMER Uniprot:Q3AAZ1
Length = 354
Score = 129 (50.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 40/147 (27%), Positives = 66/147 (44%)
Query: 267 DICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCSNVARTFLI-DAN 325
DI + I SG L +S + S ++ G++Y Y S++ RT I + +
Sbjct: 179 DIAFETIVASGERGALPHGVASEKKIV---SGEMVTLDFGAKYQGYHSDITRTVAIGEPS 235
Query: 326 TVQSKAYEVLLKAHEAAISALKSGNKVSAAYKAASTVVEKDAPELAANLTRNAGTGIGLE 385
+ Y+V+L+A EAA+ A++ G + A ++ K A G G+GL
Sbjct: 236 EKMLEIYDVVLEAQEAALQAVRPGALAVDVDRVARDIIAKAG--YAEYFGHGLGHGVGLN 293
Query: 386 FRESGLSLNAKNDRILKAGMVFNVSLG 412
E G L+ K +L+ GMV + G
Sbjct: 294 IHE-GPRLSPKGKAVLQPGMVVTIEPG 319
Score = 41 (19.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 169 EGKLL--ETWNEKLKKANFA-LSDVSNGFSDLFAIKDDTELTNIKKAAFLSSSVMKQFVV 225
EG L + + E +KA+ L + +L IKD E+ IKKA ++ + ++
Sbjct: 94 EGDALSFKDYRELSEKASGVNLVSLPEIVDELREIKDKGEVEVIKKACAIADAAFNH-LL 152
Query: 226 PKLEKVIDEEK 236
KL + E++
Sbjct: 153 KKLTPGMSEKE 163
>TIGR_CMR|CHY_1873 [details] [associations]
symbol:CHY_1873 "aminopeptidase P" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0006508
"proteolysis" evidence=ISS] [GO:0008233 "peptidase activity"
evidence=ISS] InterPro:IPR000587 InterPro:IPR000994
InterPro:IPR001714 Pfam:PF00557 Pfam:PF01321 PRINTS:PR00599
Prosite:PS00491 InterPro:IPR001131 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006508 GO:GO:0004177 GO:GO:0008233
GO:GO:0008235 Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987
KO:K01262 eggNOG:COG0006 HOGENOM:HOG000008760 RefSeq:YP_360693.1
ProteinModelPortal:Q3AAZ1 STRING:Q3AAZ1 MEROPS:M24.008
GeneID:3728643 KEGG:chy:CHY_1873 PATRIC:21276841 OMA:HCLRQMA
BioCyc:CHYD246194:GJCN-1872-MONOMER Uniprot:Q3AAZ1
Length = 354
Score = 129 (50.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 40/147 (27%), Positives = 66/147 (44%)
Query: 267 DICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCSNVARTFLI-DAN 325
DI + I SG L +S + S ++ G++Y Y S++ RT I + +
Sbjct: 179 DIAFETIVASGERGALPHGVASEKKIV---SGEMVTLDFGAKYQGYHSDITRTVAIGEPS 235
Query: 326 TVQSKAYEVLLKAHEAAISALKSGNKVSAAYKAASTVVEKDAPELAANLTRNAGTGIGLE 385
+ Y+V+L+A EAA+ A++ G + A ++ K A G G+GL
Sbjct: 236 EKMLEIYDVVLEAQEAALQAVRPGALAVDVDRVARDIIAKAG--YAEYFGHGLGHGVGLN 293
Query: 386 FRESGLSLNAKNDRILKAGMVFNVSLG 412
E G L+ K +L+ GMV + G
Sbjct: 294 IHE-GPRLSPKGKAVLQPGMVVTIEPG 319
Score = 41 (19.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 169 EGKLL--ETWNEKLKKANFA-LSDVSNGFSDLFAIKDDTELTNIKKAAFLSSSVMKQFVV 225
EG L + + E +KA+ L + +L IKD E+ IKKA ++ + ++
Sbjct: 94 EGDALSFKDYRELSEKASGVNLVSLPEIVDELREIKDKGEVEVIKKACAIADAAFNH-LL 152
Query: 226 PKLEKVIDEEK 236
KL + E++
Sbjct: 153 KKLTPGMSEKE 163
>ASPGD|ASPL0000043252 [details] [associations]
symbol:AN1582 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0009987 "cellular
process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000587 InterPro:IPR000994 Pfam:PF00557
Pfam:PF01321 EMBL:BN001307 EMBL:AACD01000025 GO:GO:0016787
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987 eggNOG:COG0006
RefSeq:XP_659186.1 ProteinModelPortal:Q5BCZ8
EnsemblFungi:CADANIAT00008215 GeneID:2875293 KEGG:ani:AN1582.2
HOGENOM:HOG000221776 OMA:QLTLEWA OrthoDB:EOG4D29ZD Uniprot:Q5BCZ8
Length = 461
Score = 118 (46.6 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 44/182 (24%), Positives = 85/182 (46%)
Query: 309 YNSYCSNVARTFLIDANT-VQSKAYEVLLKAHEAAISALKSGNKVSAAYKAASTVVEKDA 367
Y Y + + RT I T + + + V + EAA++ALK G ++ ++A + V +K+
Sbjct: 256 YKHYHACLMRTIHIGGVTKLAREMFRVNILQMEAAMAALKPGREIGDVFEAYARVADKNG 315
Query: 368 PELAANLTRNA-GTGIGLEFRESGLS--LNAKNDRIL-KAGMVFNVSLGFQNLQTENKNP 423
+ + NA G +G F + + + + +++ + GMVF + + + T+ +
Sbjct: 316 FQ---DQRFNACGYSLGATFAPTWMDYPMFVRGQKVIARPGMVFFIHIILMDKATDTASS 372
Query: 424 KTQKFSVLLADTVIVGEKVPDIVTSKSS----KAVKDVAYSFNEDDEEEEQPKVKAEVKG 479
Q V D + K+P +T K + K VK Y F E++E+E + E+
Sbjct: 373 IGQTVEVT-QDGCVALSKLPFCITRKQTIAAWKKVKKEDYGFTEEEEDEGENLQDVELSE 431
Query: 480 GE 481
G+
Sbjct: 432 GD 433
Score = 54 (24.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 141 KIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKLKKANFALSDVSNGFS-DLFA 199
K FG +N ++ G P ++ E GKLLE + L L + S F+ +L
Sbjct: 116 KQFG-INSPNRRIGYE-PNSATLTHEI--GKLLEEAVDGL----CTLVNHSTLFTRELRI 167
Query: 200 IKDDTELTNIKKAAFLS 216
+K TEL I+KAA+L+
Sbjct: 168 VKSPTELRKIRKAAYLA 184
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1073 1023 0.00080 123 3 11 23 0.44 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 626 (67 KB)
Total size of DFA: 446 KB (2212 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 110.96u 0.20s 111.16t Elapsed: 00:00:05
Total cpu time: 110.97u 0.21s 111.18t Elapsed: 00:00:05
Start: Mon May 20 15:58:11 2013 End: Mon May 20 15:58:16 2013