Query 001468
Match_columns 1073
No_of_seqs 304 out of 1860
Neff 6.3
Searched_HMMs 29240
Date Tue Mar 26 16:37:50 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001468.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_769-773//hhsearch_pdb/001468hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3biq_A FACT complex subunit SP 1.0 1 1 525.6 36.4 427 21-467 2-455 (467)
2 3cb6_A FACT complex subunit SP 1.0 1 1 516.2 34.9 430 21-464 2-444 (444)
3 3q6d_A Proline dipeptidase; st 1.0 1 1 473.5 30.0 355 30-457 1-356 (356)
4 4fkc_A XAA-Pro aminopeptidase; 1.0 1 1 468.1 30.4 365 22-456 5-376 (377)
5 4ege_A Dipeptidase PEPE; struc 1.0 1 1 462.2 32.3 368 19-457 2-376 (378)
6 2zsg_A Aminopeptidase P, putat 1.0 1 1 455.8 32.8 356 34-456 2-358 (359)
7 1wn1_A Dipeptidase; prolidase, 1.0 1 1 445.7 28.1 348 34-456 1-355 (356)
8 2iw2_A XAA-Pro dipeptidase; me 1.0 1 1 444.6 18.1 406 25-463 17-482 (494)
9 1wy2_A XAA-Pro dipeptidase; st 1.0 1 1 442.7 30.8 343 32-454 4-350 (351)
10 3ig4_A XAA-Pro aminopeptidase; 1.0 1 1 439.8 30.3 377 28-463 2-414 (427)
No 1
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=1.00 E-value=1 Score=525.56 Aligned_cols=427 Identities=31% Similarity=0.555 Sum_probs=359.3
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHH--CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCEE
Q ss_conf 746556799999999999999975--038788799669999279999862002454444744288678299999599189
Q 001468 21 AANTYAINLDNFSKRLKMLYSHWT--EHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGYEFPETIMVFLKKQIH 98 (1073)
Q Consensus 21 ~M~~i~id~~~f~~Rl~rL~~~~k--~~~~~~~~giDaLli~~g~~~~~~~Y~ks~al~~wLtGye~p~tlliit~~~~~ 98 (1073)
.|+++.|+.++|.+|+++|++.|+ + .++|+++|..+..++++.|.++.+.+.|||||++|.+++|++.+.++
T Consensus 2 ~m~~~~~~~~~~~~Rl~~Lr~~m~~~~------~giDa~li~~~~~~~~~~y~~~~~~~~yLtGf~~~~~~lvVt~d~~~ 75 (467)
T 3biq_A 2 HMEELNIDFDVFKKRIELLYSKYNEFE------GSPNSLLFVLGSSNAENPYQKTTILHNWLLSYEFPATLIALVPGKVI 75 (467)
T ss_dssp -----CCCHHHHHHHHHHHHHHGGGST------TCCSEEEEEECSCCTTSTTCHHHHHHHHHHSSCCSSEEEEEETTEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHH------CCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEE
T ss_conf 964356699999999999999977641------58988999748877787776514322385589988789999799589
Q ss_pred EEEECCCCCHHHHHHH--HCCC-CCCEEEEEEE-CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHH
Q ss_conf 9992884115999985--1343-4654999972-7877888975999999942101589999998999378997288899
Q 001468 99 FLCSQKKASLLEVIKK--SAKE-AVGIEVVIHV-KGKTDDGSGLMDKIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLE 174 (1073)
Q Consensus 99 ll~s~kK~~~le~~~~--~~~~-~~~v~i~~~~-kd~~d~~~~~~~~l~~~lk~~~~~~~~~~~kIGv~~kd~~~g~f~~ 174 (1073)
++++..++.|+.++.. .... ...++++.+. .+..... ..+..+.+.|+. . +++||++..+.++..++.
T Consensus 76 L~~d~~~~~y~~~a~~~~e~~~~~~~v~v~~~~~~~~~~~~-~~~~~L~~~L~~------~-~~~Igv~~~~~~s~~~~~ 147 (467)
T 3biq_A 76 IITSSAKAKHLQKAIDLFKDPESKITLELWQRNNKEPELNK-KLFDDVIALINS------A-GKTVGIPEKDSYQGKFMT 147 (467)
T ss_dssp EEEEHHHHHHHHHHHGGGCC--CCCEEEEEEECTTCHHHHH-HHHHHHHHHHHH------H-CSEEEECTTCCCCSHHHH
T ss_pred EEECCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCH-HHHHHHHHHHHH------H-CCEEEEECCCCCCHHHHH
T ss_conf 99887536789987652246667877389980356533340-359999999986------2-987889667553236899
Q ss_pred HHHHHHHH----CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99999741----59548837866554456689999999999999999998999999846301236898999999999999
Q 001468 175 TWNEKLKK----ANFALSDVSNGFSDLFAIKDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKA 250 (1073)
Q Consensus 175 ~l~~~l~~----~~~e~vDvs~~i~~lRaVKs~~EI~~iR~Aa~is~~~m~~~~~~~i~~iid~e~gvte~eLa~~ie~~ 250 (1073)
.|.+.++. .+.+++++++.+..+|+||+++||+.||+|+++++.+|. .+...++++|+.+.|+||.+|++.++..
T Consensus 148 ~L~~~l~~~~~~~~~~lv~~~~~i~~lr~iK~~~Ei~~~r~A~~i~~~a~~-~~~~~i~~~i~~g~g~te~el~~~~~~~ 226 (467)
T 3biq_A 148 EWNPVWEAAVKENEFNVIDISLGLSKVWEVKDVNEQAFLSVSSKGSDKFMD-LLSNEMVRAVDEELKITNAKLSDKIENK 226 (467)
T ss_dssp HHHHHHHHHHHHHTCEEEECHHHHHHHTCSCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHTTCCCBHHHHHHHHHHG
T ss_pred HHHHHHHHHCCCCCCEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf 999998741134885364248899999766999999999999999999999-9999734212565895699999999999
Q ss_pred HHC-----CCHH-HHH-------CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEECCEEEEEE
Q ss_conf 972-----3302-321-------166877777877688589988788876777321147744099960225688675459
Q 001468 251 ILE-----PARI-KVK-------LKAENVDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCSNVA 317 (1073)
Q Consensus 251 l~~-----~~k~-~~~-------~g~~~~d~~y~pIVqSG~~~~l~~~~~s~d~~L~~G~~diIivdlG~~y~gY~sdi~ 317 (1073)
+.. .++. ..+ +.+...+++|+|||+||.|+++.+|+.|+++.|+.| |+|++|+|++|+|||+|++
T Consensus 227 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~f~~iv~~G~n~~~~~H~~~~~~~l~~g--d~v~iD~g~~~~gy~sD~t 304 (467)
T 3biq_A 227 IDDVKFLKQLSPDLSALCPPNYKFNFDLLDWTYSPIIQSGKKFDLRVSARSTNDQLYGN--GCILASCGIRYNNYCSNIT 304 (467)
T ss_dssp GGCHHHHHHHHHHHHTTSCTTCCCCGGGEEESSCCEEECTTCCCCSTTCCCCSSBCCCS--EEEEEEECEEETTEECCEE
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCC--CEEEEEEEEEECCEEEEEE
T ss_conf 98523443277432222333235773113578787477558866462169998766899--9899998489897986016
Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999618967999999999999999998-389998989999999999941972203667761110345454588745678
Q 001468 318 RTFLIDANTVQSKAYEVLLKAHEAAISA-LKSGNKVSAAYKAASTVVEKDAPELAANLTRNAGTGIGLEFRESGLSLNAK 396 (1073)
Q Consensus 318 RT~~VgPs~eq~~~y~~ll~a~~~~i~~-LkpGvt~~dVy~aa~~~i~~~gp~l~~~~~~~~GhgIGle~~E~p~~I~~~ 396 (1073)
|||++||+++|+++|+++++++.+++++ +|||+++++|+.++++++.+.|+.+..+|+|++|||||+++||.|.+++++
T Consensus 305 RT~~~g~~~~~~~~~~~v~~a~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~g~~~~~~h~~GHgiGl~~hE~p~~~~~~ 384 (467)
T 3biq_A 305 RTFLIDPSEEMANNYDFLLTLQKEIVTNILKPGRTPKEVYESVIEYIEKTKPELVPNFTKNIGSLIGLEFRDSNFILNVK 384 (467)
T ss_dssp EEEEESCCHHHHHHHHHHHHHHHHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECSSSSCCGGGBSSTT
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99995799999999999999999999827769896999999999999971843434377785565666524687667999
Q ss_pred C-CCEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEE--CCCCEECCCCCCCCHHHHCCCCCCCHHH
Q ss_conf 9-950108837879413112468999987991469997999991--7984141666655554411524896021
Q 001468 397 N-DRILKAGMVFNVSLGFQNLQTENKNPKTQKFSVLLADTVIVG--EKVPDIVTSKSSKAVKDVAYSFNEDDEE 467 (1073)
Q Consensus 397 n-~~~Lk~GMVf~IepG~~~l~~~~~~~~~~~~gi~ieDTVlVt--e~G~evLT~~~pk~l~~Is~~~~d~~~~ 467 (1073)
+ ..+|++||||+||||+|++..|+ +++.+|++|||||+|| ++|+++||..+|+++..|.++|++++|+
T Consensus 385 ~~~~~l~~Gmv~tiEPgiy~~~~~~---~~g~~gvriEd~v~Vt~~~~G~e~Lt~~~p~~~~~i~~~~~~~~e~ 455 (467)
T 3biq_A 385 NDYRKIQRGDCFNISFGFNNLKDSQ---SANNYALQLADTVQIPLDETEPPRFLTNYTKAKSQISFYFNNEEED 455 (467)
T ss_dssp CCSCCCCTTCEEEEEEEEEEECCSS---CSSCEEEEEEEEEECCSSTTSCCEESCCSCCCHHHHEECC------
T ss_pred CCCCCCCCCCEEEEECEEEEEECCC---CCCCCEEEEEEEEEEECCCCCCEEECCCCCCCHHHHHHHHHCCCCC
T ss_conf 8888638998999958688413487---7885179997899991589975770655788899999997066666
No 2
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=1.00 E-value=1 Score=516.24 Aligned_cols=430 Identities=37% Similarity=0.657 Sum_probs=347.3
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCC--CCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCEE
Q ss_conf 7465567999999999999999750387--88799669999279999862002454444744288678299999599189
Q 001468 21 AANTYAINLDNFSKRLKMLYSHWTEHNS--DLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGYEFPETIMVFLKKQIH 98 (1073)
Q Consensus 21 ~M~~i~id~~~f~~Rl~rL~~~~k~~~~--~~~~giDaLli~~g~~~~~~~Y~ks~al~~wLtGye~p~tlliit~~~~~ 98 (1073)
.|+++.|+.++|.+|+++|++.|++... ..+.++|+++|..+..+++++|.++.+++.|||||+.|+++++++++.++
T Consensus 2 ~m~~~~~~~~~~~~Rl~~L~~~m~~~~~~~~~~~g~Dalli~~~~~d~~~~y~q~~~~~~yLtG~~~~~~~lvi~~~~~~ 81 (444)
T 3cb6_A 2 AMAEYEIDEITFHKRLGILLTSWKNEEDGKTLFQDCDSILVTVGAHDDTNPYQKSTALHTWLLGYEFPSTLILLEKHRIT 81 (444)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHHHHSHHHHHHTSTTCSEEEEEECSCCTTCCCCHHHHHHHHHHSSCCSSEEEEEETTEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCEE
T ss_conf 97447869999999999999974405765310268887999707888887765541341797678877779999479289
Q ss_pred EEEECCCCCHHHHHH-HHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf 999288411599998-5134346549999727877888975999999942101589999998999378997288899999
Q 001468 99 FLCSQKKASLLEVIK-KSAKEAVGIEVVIHVKGKTDDGSGLMDKIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLETWN 177 (1073)
Q Consensus 99 ll~s~kK~~~le~~~-~~~~~~~~v~i~~~~kd~~d~~~~~~~~l~~~lk~~~~~~~~~~~kIGv~~kd~~~g~f~~~l~ 177 (1073)
++++..+..|++++. .... ...+.++.+..+...+. ..+..++..|+. .+++||++..+..+..++..|.
T Consensus 82 l~~~~~~~~y~~~~~~~~~~-~~~~~~~~~~~d~~~~~-~~~~~~~~~l~~-------~~~~ig~~~~~~~~~~~~~~l~ 152 (444)
T 3cb6_A 82 ILTSVNKANMLTKLAETKGA-AADVNILKRTKDAEENK-KLFEKIIEYIRA-------TNKKVGVFPKDKTQGKFINEWD 152 (444)
T ss_dssp EEEEHHHHTTTHHHHTCTTC-SSEEEEEEECSCHHHHH-HHHHHHHHHHHT-------TTSEEEECTTCCCCSHHHHHHH
T ss_pred EEECCCHHHHHHHHHCCCCC-CCCEEEEECCCCCCCCH-HHHHHHHHHHHH-------CCCEEEEECCCCCHHHHHHHHH
T ss_conf 99747457887643026667-86379983255554578-899999999973-------5988999536543567999999
Q ss_pred HHHHH--CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 99741--5954883786655445668999999999999999999899999984630123689899999999999997233
Q 001468 178 EKLKK--ANFALSDVSNGFSDLFAIKDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILEPA 255 (1073)
Q Consensus 178 ~~l~~--~~~e~vDvs~~i~~lRaVKs~~EI~~iR~Aa~is~~~m~~~~~~~i~~iid~e~gvte~eLa~~ie~~l~~~~ 255 (1073)
..+.. .+.+++|+++.+..+|+||+++||++||+|+++++.+|.+.+.+.+...+..+.++||.+|++.++..+...+
T Consensus 153 ~~l~~~~~~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~~~~~~~i~~G~~~te~el~~~~~~~~~~~~ 232 (444)
T 3cb6_A 153 SIFEPVKSEFNLVDASLGLAKCLAIKDEQELANIKGASRVSVAVMSKYFVDELSTYIDQGKKITHSKFSDQMESLIDNEA 232 (444)
T ss_dssp HHHTTTGGGSEEEECHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCBHHHHHHHHHGGGGCHH
T ss_pred HHHHHCCCCCEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 98753248854764289999987349999999999999999999999989899987355655679999999999998715
Q ss_pred HHHH--HCC-----CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEECCEEEEEEEEEEECCCHHH
Q ss_conf 0232--116-----687777787768858998878887677732114774409996022568867545999996189679
Q 001468 256 RIKV--KLK-----AENVDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCSNVARTFLIDANTVQ 328 (1073)
Q Consensus 256 k~~~--~~g-----~~~~d~~y~pIVqSG~~~~l~~~~~s~d~~L~~G~~diIivdlG~~y~gY~sdi~RT~~VgPs~eq 328 (1073)
+.. +.| ....+++|+|||+||+|+++.+|+.|+++.|+ | |+|++|+|++|+|||||++|||+++|+++|
T Consensus 233 -~~~g~~~ga~~~~~~~~~~~f~~iv~~g~n~~~~~H~~~~~~~l~-g--d~v~iD~g~~~~gy~sD~tRT~~v~~~~~~ 308 (444)
T 3cb6_A 233 -FFQTKSLKLGDIDLDQLEWCYTPIIQSGGSYDLKPSAITDDRNLH-G--DVVLCSLGFRYKSYCSNVGRTYLFDPDSEQ 308 (444)
T ss_dssp -HHTCGGGCCTTCCGGGEEESSCCEEECTTCCCCSTTCCCCSSBCC-S--SEEEEEECEEETTEECCEEEEEEESCCHHH
T ss_pred -CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEECCCCCCCCCC-C--CEEEEEEEEEECCEEEEEEEEEEECCCHHH
T ss_conf -433333453345655662026866765688673234479877036-9--879999717568784630579994699999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEE
Q ss_conf 99999999999999998389998989999999999941972203667761110345454588745678995010883787
Q 001468 329 SKAYEVLLKAHEAAISALKSGNKVSAAYKAASTVVEKDAPELAANLTRNAGTGIGLEFRESGLSLNAKNDRILKAGMVFN 408 (1073)
Q Consensus 329 ~~~y~~ll~a~~~~i~~LkpGvt~~dVy~aa~~~i~~~gp~l~~~~~~~~GhgIGle~~E~p~~I~~~n~~~Lk~GMVf~ 408 (1073)
+++|+++++++.++++++|||+++++|+.++++++.+.|+.|..+|+|++|||||+++||.|.++++++..+|++||||+
T Consensus 309 ~~~y~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~~~g~~~~~~h~~GHgiGl~~he~p~~~~~~~~~~l~~Gmv~t 388 (444)
T 3cb6_A 309 QKNYSFLVALQKKLFEYCRDGAVIGDIYTKILGLIRAKRPDLEPNFVRNLGAGIGIEFRESSLLVNAKNPRVLQAGMTLN 388 (444)
T ss_dssp HHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECSSSSCBGGGCCSTTCCCBCCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 99999999999999997689993999999999999962344675355660122475602786555899986469998899
Q ss_pred EEECCCCCCCCC-CCCCCCEEEEEEEEEEEEECCCCEECCCCCCCCHHHHCCCCCCC
Q ss_conf 941311246899-99879914699979999917984141666655554411524896
Q 001468 409 VSLGFQNLQTEN-KNPKTQKFSVLLADTVIVGEKVPDIVTSKSSKAVKDVAYSFNED 464 (1073)
Q Consensus 409 IepG~~~l~~~~-~~~~~~~~gi~ieDTVlVte~G~evLT~~~pk~l~~Is~~~~d~ 464 (1073)
||||+|++..++ +...++.+|++|||||+||++|+++||. +|+++..|.|+|+||
T Consensus 389 iEPgiy~~~~~~~~~~~~~~~gvriEd~v~vt~~g~e~Lt~-~p~~l~~Ie~~~~~~ 444 (444)
T 3cb6_A 389 LSIGFGNLINPHPKNSQSKEYALLLIDTIQITRSDPIVFTD-SPKAQGDISYFFGED 444 (444)
T ss_dssp EEEEEEEEECSSCCTTSCSEEEEEEEEEEECCSSSCEETTC-CCCSHHHHEECC---
T ss_pred EEECCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEECCC-CCCCHHHHHHHHCCC
T ss_conf 98211466675434335782389998899998998654225-998589987164179
No 3
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=1.00 E-value=1 Score=473.49 Aligned_cols=355 Identities=21% Similarity=0.327 Sum_probs=313.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCEEEEEECCCCCHH
Q ss_conf 99999999999997503878879966999927999986200245444474428867829999959918999928841159
Q 001468 30 DNFSKRLKMLYSHWTEHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGYEFPETIMVFLKKQIHFLCSQKKASLL 109 (1073)
Q Consensus 30 ~~f~~Rl~rL~~~~k~~~~~~~~giDaLli~~g~~~~~~~Y~ks~al~~wLtGye~p~tlliit~~~~~ll~s~kK~~~l 109 (1073)
++|.+|+++|++.|++ .++|+++|+.+. + +.|||||..++++++++.+..+++++. .+.
T Consensus 1 ~~~~~Rl~~lr~~m~~------~giDa~lI~~~~-n-----------i~YLtGf~g~~~~llvt~~~~~l~~d~---r~~ 59 (356)
T 3q6d_A 1 SNAMEKIERLRSAFDE------AGIDGILLTNEH-S-----------RRYMANFTGTAGVVLISKKRAQFITDF---RYV 59 (356)
T ss_dssp -CHHHHHHHHHTTHHH------HTCSEEEECCHH-H-----------HHHHHCCCSSSCEEEEESSCEEEEECG---GGH
T ss_pred CCHHHHHHHHHHHHHH------CCCCEEEECCHH-H-----------CEECCCCCCCCEEEEEECCCEEEEECH---HHH
T ss_conf 9678999999999998------699999989844-3-----------457548987886999978974999872---458
Q ss_pred HHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 99985134346549999727877888975999999942101589999998999378997288899999997415954883
Q 001468 110 EVIKKSAKEAVGIEVVIHVKGKTDDGSGLMDKIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKLKKANFALSD 189 (1073)
Q Consensus 110 e~~~~~~~~~~~v~i~~~~kd~~d~~~~~~~~l~~~lk~~~~~~~~~~~kIGv~~kd~~~g~f~~~l~~~l~~~~~e~vD 189 (1073)
+++... ...++++.+. . +.++.+.+.+++ ...++||++.. .++..++..|.+.++ + +++|
T Consensus 60 ~~a~~~---~~~~~v~~~~----~---~~~~~l~~~l~~------~~~~~igve~~-~~~~~~~~~l~~~~~--~-~~~~ 119 (356)
T 3q6d_A 60 EQASKQ---AVGYEIVQHA----G---LIIDEVAKQVKE------LGIQKLGFEQD-TLTYSSYSAHKEAID--A-EFIP 119 (356)
T ss_dssp HHHHHH---STTSEEEECS----S---CHHHHHHHHHHH------HTCSEEEEETT-TSBHHHHHHHHHHCC--S-EEEE
T ss_pred HHHHHH---CCCCEEEEEC----C---CHHHHHHHHHHH------CCCCEEEECCC-CCCHHHHHHHHHHCC--C-CEEC
T ss_conf 999964---7997799957----8---889999999986------39963997576-477999999963564--3-3542
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCC
Q ss_conf 78665544566899999999999999999989999998463012368989999999999999723302321166877777
Q 001468 190 VSNGFSDLFAIKDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILEPARIKVKLKAENVDIC 269 (1073)
Q Consensus 190 vs~~i~~lRaVKs~~EI~~iR~Aa~is~~~m~~~~~~~i~~iid~e~gvte~eLa~~ie~~l~~~~k~~~~~g~~~~d~~ 269 (1073)
++..+..+|+||+++||+.||+|+++++.+|. .+.+.++ +|+||.+|++.++..+.. .|.. ..+
T Consensus 120 ~~~~~~~~R~iK~~~Ei~~~r~A~~i~~~~~~-~~~~~i~------~G~te~e~~~~~~~~~~~-------~g~~--~~~ 183 (356)
T 3q6d_A 120 TSGLVEKLRLIKTDSEIKILKEAAQIADAAFE-HILSFIR------PGVSEIEVSNELEFFMRK-------QGAT--SSS 183 (356)
T ss_dssp ECSHHHHHHTSCCHHHHHHHHHHHHHHHHHHH-HHTTTCC------TTCBHHHHHHHHHHHHHH-------TTCS--EES
T ss_pred CHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHCC------CCCCHHHHHHHHHHHHHH-------CCCC--CCC
T ss_conf 46655544558999999999999999999999-9999756------999899999999999998-------7998--689
Q ss_pred CCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEECCEEEEEEEEEEEC-CCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 877688589988788876777321147744099960225688675459999961-8967999999999999999998389
Q 001468 270 YPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCSNVARTFLID-ANTVQSKAYEVLLKAHEAAISALKS 348 (1073)
Q Consensus 270 y~pIVqSG~~~~l~~~~~s~d~~L~~G~~diIivdlG~~y~gY~sdi~RT~~Vg-Ps~eq~~~y~~ll~a~~~~i~~Lkp 348 (1073)
|++|++||.|.++ +|+.|+++.|+.| |+|++|+|++|+|||+|++||+++| |+++|+++|+++++++.++++++||
T Consensus 184 f~~iv~~g~n~~~-~H~~~~~~~l~~g--d~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~p 260 (356)
T 3q6d_A 184 FDIIVASGLRSAL-PHGVASEKVIETG--DFVTLDFGAYYKGYCSDITRTIAVGEPSDKLKEIYNIVLEAQLRGVNGIKA 260 (356)
T ss_dssp SCCEEEEGGGGGC-TTCBCCSCBCCTT--CEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred CCCEEEECCCCCC-CCCCCCCCCCCCC--CEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 8877897476255-7788898626799--999999707789898512799986999999999999999999999998169
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCEE
Q ss_conf 99898999999999994197220366776111034545458874567899501088378794131124689999879914
Q 001468 349 GNKVSAAYKAASTVVEKDAPELAANLTRNAGTGIGLEFRESGLSLNAKNDRILKAGMVFNVSLGFQNLQTENKNPKTQKF 428 (1073)
Q Consensus 349 Gvt~~dVy~aa~~~i~~~gp~l~~~~~~~~GhgIGle~~E~p~~I~~~n~~~Lk~GMVf~IepG~~~l~~~~~~~~~~~~ 428 (1073)
|+++++|+.++++++.+.| |..+|.|++|||||+++||.| .++++++.+|++||||++|||+| + ++.+
T Consensus 261 G~~~~~i~~~~~~~~~~~g--~~~~~~h~~GHgiGl~~he~p-~i~~~~~~~l~~Gmv~tiEPgiy-~--------~g~~ 328 (356)
T 3q6d_A 261 GLTGREADALTRDYITEKG--YGEYFGHSTGHGIGLEIHEAP-GLAFRSDTVLEPGMAVTVEPGIY-I--------PGIG 328 (356)
T ss_dssp TCBHHHHHHHHHHHHHHTT--CGGGCCSCSEEECSSSSSEEE-EESTTCCCBCCTTCEEEECCEEE-E--------TTTE
T ss_pred CCCHHHHHHHHHHHHHHCC--CCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCEEEECCEEE-E--------CCCC
T ss_conf 8929999999999999769--964489997065888767688-77899998869999999899888-7--------8987
Q ss_pred EEEEEEEEEEECCCCEECCCCCCCCHHHH
Q ss_conf 69997999991798414166665555441
Q 001468 429 SVLLADTVIVGEKVPDIVTSKSSKAVKDV 457 (1073)
Q Consensus 429 gi~ieDTVlVte~G~evLT~~~pk~l~~I 457 (1073)
|+++||||+||++|+++||. .|+++..+
T Consensus 329 gvriEd~v~vt~~G~e~Lt~-~p~~l~~~ 356 (356)
T 3q6d_A 329 GVRIEDDIIVTSEGNEVITK-SPKELIIL 356 (356)
T ss_dssp EEECBEEEEECSSSEEECCC-SCCSCCBC
T ss_pred EEEECCEEEEECCCCEECCC-CCCCEEEC
T ss_conf 69975689994993566999-99643759
No 4
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=1.00 E-value=1 Score=468.05 Aligned_cols=365 Identities=21% Similarity=0.302 Sum_probs=310.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCE-----EEEEEC-C
Q ss_conf 4655679999999999999997503878879966999927999986200245444474428867829-----999959-9
Q 001468 22 ANTYAINLDNFSKRLKMLYSHWTEHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGYEFPET-----IMVFLK-K 95 (1073)
Q Consensus 22 M~~i~id~~~f~~Rl~rL~~~~k~~~~~~~~giDaLli~~g~~~~~~~Y~ks~al~~wLtGye~p~t-----lliit~-~ 95 (1073)
|+.+.|...+|++|+++|++.|++ +|+|+++|+.+. | ++|||||..+.+ ++++.. +
T Consensus 5 ~~~~~~~~~Ey~~Rl~rlr~~m~~------~glDalli~~~~-n-----------i~YLTG~~~~~~~~~~~~lvv~~~g 66 (377)
T 4fkc_A 5 HHHHHHGSMDYKRRIHKFQAHFGK------KGFEGALVAPGS-N-----------FYYLTGFNPLGTLERLFVLILPSEG 66 (377)
T ss_dssp ---CCSSSSCHHHHHHHHHHHHHH------TTCCEEEECSSH-H-----------HHHHHSCCCCCCSSSCCEEEEESSS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHH------CCCCEEEECCCH-H-----------HEEECCCCCCCCCCCEEEEEECCCC
T ss_conf 457775039999999999999998------799899978870-1-----------2556498988877524999994899
Q ss_pred CEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHH
Q ss_conf 18999928841159999851343465499997278778889759999999421015899999989993789972888999
Q 001468 96 QIHFLCSQKKASLLEVIKKSAKEAVGIEVVIHVKGKTDDGSGLMDKIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLET 175 (1073)
Q Consensus 96 ~~~ll~s~kK~~~le~~~~~~~~~~~v~i~~~~kd~~d~~~~~~~~l~~~lk~~~~~~~~~~~kIGv~~kd~~~g~f~~~ 175 (1073)
.+++++... ....+ .. +..++..|. +.. ..+..+...|+.. ...+++||++. ..+...+..
T Consensus 67 ~~~~~~~~~---~~~~~-~~----~~~~~~~~~----~~~-~~~~~~~~~l~~~----~~~~~~i~~d~--~~~~~~~~~ 127 (377)
T 4fkc_A 67 LLTAIAPRL---YEKEL-EE----FNGEVVLWS----DSE-NPYKIFATKIKET----FKEGEKLLIDD--TMPVGVFLK 127 (377)
T ss_dssp CCEEEEEGG---GHHHH-TT----CSSEEEEEC----TTS-CHHHHHHHHHHHH----SCSSCEEEECT--TSCHHHHHH
T ss_pred CEEEEECCC---HHHHH-HH----CCCCEEEEC----CCC-CHHHHHHHHHHHH----HHCCCEEEEEC--CCCHHHHHH
T ss_conf 689994243---09999-86----689779751----543-7799999999875----31355464204--404999999
Q ss_pred HHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 99997415954883786655445668999999999999999999899999984630123689899999999999997233
Q 001468 176 WNEKLKKANFALSDVSNGFSDLFAIKDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILEPA 255 (1073)
Q Consensus 176 l~~~l~~~~~e~vDvs~~i~~lRaVKs~~EI~~iR~Aa~is~~~m~~~~~~~i~~iid~e~gvte~eLa~~ie~~l~~~~ 255 (1073)
+.+.++ +.+++|+++.|..+|+||+++||++||+|+++++.++. .+.+.++ +|+||.+|++.++..+...
T Consensus 128 l~~~~~--~~~~~d~~~~i~~lR~iKs~~EI~~~r~A~~i~~~a~~-~~~~~~~------~G~tE~el~~~~~~~~~~~- 197 (377)
T 4fkc_A 128 AKDIFD--KYSLHPISPVISELREIKDKDEIKAHKKAAEIVDKVFY-RFIEGKL------EGKSERELANRIEYMIKNE- 197 (377)
T ss_dssp THHHHT--TSEEEESHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHH-HHTTSCC------TTCBHHHHHHHHHHHHHTS-
T ss_pred HHHHCC--CCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH-HHHHCCC------CCCCHHHHHHHHHHHHHHC-
T ss_conf 986489--98698819999999832999999999999799999988-6654167------9861999988776555421-
Q ss_pred HHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEECCEEEEEEEEEEEC-CCHHHHHHHHH
Q ss_conf 02321166877777877688589988788876777321147744099960225688675459999961-89679999999
Q 001468 256 RIKVKLKAENVDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCSNVARTFLID-ANTVQSKAYEV 334 (1073)
Q Consensus 256 k~~~~~g~~~~d~~y~pIVqSG~~~~l~~~~~s~d~~L~~G~~diIivdlG~~y~gY~sdi~RT~~Vg-Ps~eq~~~y~~ 334 (1073)
.|. .+++|+|||+||+|++. +|+.++++.|+.| |+|++|+|++|+|||+|++|||++| |+++|+++|+.
T Consensus 198 -----~g~--~~~~f~~iv~~G~n~~~-~H~~~~~~~l~~g--d~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~ 267 (377)
T 4fkc_A 198 -----FGA--DDVSFEPIVASGPNGAN-PHHRPSHRKIRKG--DVVIFDYGAKYLGYCSDVTRTVVVGPPSEEVKKVYEI 267 (377)
T ss_dssp -----TTC--CEESSCCEEEEGGGGGC-TTCCCCSCBCCTT--CEEEEEECEEETTEECCEEEEEESSSCCTHHHHHHHH
T ss_pred -----CCC--CCCCCCCCCCCCCCCCC-CCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHH
T ss_conf -----478--77666753345665333-3566434331224--5533445631057555543268984177999976543
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCC
Q ss_conf 99999999998389998989999999999941972203667761110345454588745678995010883787941311
Q 001468 335 LLKAHEAAISALKSGNKVSAAYKAASTVVEKDAPELAANLTRNAGTGIGLEFRESGLSLNAKNDRILKAGMVFNVSLGFQ 414 (1073)
Q Consensus 335 ll~a~~~~i~~LkpGvt~~dVy~aa~~~i~~~gp~l~~~~~~~~GhgIGle~~E~p~~I~~~n~~~Lk~GMVf~IepG~~ 414 (1073)
++++++++++++|||+++++|+.++++++.+.| +..+|.|++|||||+++||.| .+++++..+|++||||+||||+|
T Consensus 268 v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~g--~~~~~~h~~GHgiGl~~hE~P-~i~~~~~~~L~~Gmv~tiEPgiy 344 (377)
T 4fkc_A 268 VKEAQETAVQKVAEGIPAEVVDATARGIISKYG--YGEYFIHRTGHGLGIDVHEEP-YISPGNKKILKDGMVFTIEPGIY 344 (377)
T ss_dssp HHHHHHHHHHHCBTTCBHHHHHHHHHHHHHHTT--CTTTCCSCSEEECSSSSSEEE-EECSSCCCBCCTTCEEEECCEEE
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC--CCCCCCCCCEEECCCCCCCCC-CCCCCCCCEECCCCEEEECCEEE
T ss_conf 577889988730688621356799999999716--566479998671788636698-21599998808998999899568
Q ss_pred CCCCCCCCCCCCEEEEEEEEEEEEECCCCEECCCCCCCCHHH
Q ss_conf 246899998799146999799999179841416666555544
Q 001468 415 NLQTENKNPKTQKFSVLLADTVIVGEKVPDIVTSKSSKAVKD 456 (1073)
Q Consensus 415 ~l~~~~~~~~~~~~gi~ieDTVlVte~G~evLT~~~pk~l~~ 456 (1073)
+ ++.+|++|||||+||++|+++||. +|++|..
T Consensus 345 -~--------~g~~GvriEd~v~Vt~~g~e~Lt~-~p~eli~ 376 (377)
T 4fkc_A 345 -L--------QGKFGVRIEDDVALVDKKGIRLTN-ADRELIT 376 (377)
T ss_dssp -E--------TTTEEEECBEEEEEETTEEEESCC-SCCSCCB
T ss_pred -E--------CCCCEEEECCEEEEECCCCEECCC-CCCCEEE
T ss_conf -8--------993579986699998998189989-9987386
No 5
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=1.00 E-value=1 Score=462.19 Aligned_cols=368 Identities=20% Similarity=0.256 Sum_probs=312.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCC----EEEEEE-
Q ss_conf 777465567999999999999999750387887996699992799998620024544447442886782----999995-
Q 001468 19 NAAANTYAINLDNFSKRLKMLYSHWTEHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGYEFPE----TIMVFL- 93 (1073)
Q Consensus 19 ~~~M~~i~id~~~f~~Rl~rL~~~~k~~~~~~~~giDaLli~~g~~~~~~~Y~ks~al~~wLtGye~p~----tlliit- 93 (1073)
|--|-...|+.++|.+|+++|++.|++ .|+|+++++.+. | +.|||||.... ++++++
T Consensus 2 ~~~~~~~~~~~~e~~~R~~~l~~~m~~------~g~da~li~~~~-n-----------i~YltG~~~~~~~r~~~l~v~~ 63 (378)
T 4ege_A 2 PGSMDSGRFDTAVYARRLAAAAAATEQ------AGLAGLVITPGY-D-----------LRYLIGSRADTFERLTALVLPA 63 (378)
T ss_dssp ------CCCCHHHHHHHHHHHHHHHHH------TTCSEEEECSSH-H-----------HHHHHCCCCCCSSSCCEEEEES
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHH------CCCCEEEECCCC-H-----------HHHHHCCCCCCCCCEEEEEEEE
T ss_conf 998768888979999999999999987------699899987821-4-----------6874189788875117999980
Q ss_pred CCCEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHH
Q ss_conf 99189999288411599998513434654999972787788897599999994210158999999899937899728889
Q 001468 94 KKQIHFLCSQKKASLLEVIKKSAKEAVGIEVVIHVKGKTDDGSGLMDKIFGAVNDQSKSGGQNSPVVGHISREAPEGKLL 173 (1073)
Q Consensus 94 ~~~~~ll~s~kK~~~le~~~~~~~~~~~v~i~~~~kd~~d~~~~~~~~l~~~lk~~~~~~~~~~~kIGv~~kd~~~g~f~ 173 (1073)
.++++++++.. . ..++....-....+.+..|. +.. +.+..+.+.+. ...++||++ +.++..++
T Consensus 64 ~g~~~l~~~~~--~-~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~l~~~l~-------~~~~~igve--~~~~~~~~ 126 (378)
T 4ege_A 64 SGVPTIVLPRL--E-LASLKESAASDLGVCVRDWV----DGD-DPYQLVAVALG-------GAPAATAVT--DSMPALHL 126 (378)
T ss_dssp SSCCEEEEEGG--G-GGGGGTSSTTTTTCEEEEEC----TTS-CHHHHHHHHTT-------SSSCCEEEC--TTCCHHHH
T ss_pred CCCEEEEECHH--H-HHHHHHCCCCCCCEEEEEEC----CCC-CHHHHHHHHHH-------CCCCEEEEC--CCCCHHHH
T ss_conf 99179998931--2-99998532678975999955----888-99999999873-------479789996--77769999
Q ss_pred HHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 99999974159548837866554456689999999999999999998999999846301236898999999999999972
Q 001468 174 ETWNEKLKKANFALSDVSNGFSDLFAIKDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILE 253 (1073)
Q Consensus 174 ~~l~~~l~~~~~e~vDvs~~i~~lRaVKs~~EI~~iR~Aa~is~~~m~~~~~~~i~~iid~e~gvte~eLa~~ie~~l~~ 253 (1073)
..|.+.+ +.+++|++..+..+|++|+++||+.||+|+++++.+|. .+.+.++ +|+||.+|++.++..+.+
T Consensus 127 ~~l~~~~---~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~-~~~~~i~------~G~tE~el~~~~~~~~~~ 196 (378)
T 4ege_A 127 LPLADAL---GVLPVLATDVLRQLRMVKEAAEVDALAKAGAAIDRVHA-RVPAFLV------PGRTEAQVAADIAEAIVA 196 (378)
T ss_dssp HHHHHHH---TSCCEESHHHHHHHHTBCCHHHHHHHHHHHHHHHHHHH-HHHHHCC------TTCBHHHHHHHHHHHHHH
T ss_pred HHHHHHC---CCEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH-HHHHHCC------CCCCHHHHHHHHHHHHHH
T ss_conf 9999872---98698809999999876999999999999999999999-9998631------898899999999999998
Q ss_pred CCHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEE-CCEEEEEEEEEEEC-CCHHHHHH
Q ss_conf 33023211668777778776885899887888767773211477440999602256-88675459999961-89679999
Q 001468 254 PARIKVKLKAENVDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRY-NSYCSNVARTFLID-ANTVQSKA 331 (1073)
Q Consensus 254 ~~k~~~~~g~~~~d~~y~pIVqSG~~~~l~~~~~s~d~~L~~G~~diIivdlG~~y-~gY~sdi~RT~~Vg-Ps~eq~~~ 331 (1073)
.|.. ..+| +||+||.|.+. +|+.|+++.|+.| |+|++|+|++| +|||||++||+++| |+++|+++
T Consensus 197 -------~G~~--~~~f-~iv~sG~n~~~-~H~~~~~~~l~~G--d~v~iD~G~~~~~GY~sD~tRT~~vG~~~~~~~~~ 263 (378)
T 4ege_A 197 -------EGHS--AVAF-VIVGSGPHGAD-PHHGYSDRKLQVG--DIVVVDIGGTYEPGYYSDSTRTYSIGDPSPDVAQQ 263 (378)
T ss_dssp -------TTCS--EEEE-EEEEEGGGGGC-TTCCCCSCBCCTT--CEEEEEEEEEETTTEECCEEEEEEESCCCHHHHHH
T ss_pred -------CCCC--CCCE-EEEEEECCCCC-CCCCCCCCCCCCC--CEEEEEEEEEECCEEEECCEEEEEECCCCHHHHHH
T ss_conf -------6997--7780-08985077770-5789988874899--98999999997892897348999908999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEE
Q ss_conf 99999999999998389998989999999999941972203667761110345454588745678995010883787941
Q 001468 332 YEVLLKAHEAAISALKSGNKVSAAYKAASTVVEKDAPELAANLTRNAGTGIGLEFRESGLSLNAKNDRILKAGMVFNVSL 411 (1073)
Q Consensus 332 y~~ll~a~~~~i~~LkpGvt~~dVy~aa~~~i~~~gp~l~~~~~~~~GhgIGle~~E~p~~I~~~n~~~Lk~GMVf~Iep 411 (1073)
|+.+++++.++++++|||+++++|+.++++++.+.| |..+|.|++|||||+++||.|. +.++++.+|++||||++||
T Consensus 264 ~~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~G--~~~~~~h~~GHgiGl~~hE~P~-i~~~~~~~L~~Gmv~tiEP 340 (378)
T 4ege_A 264 YSALQRAQRAAVDAVRPGVTAAQVDAAARDVLADAG--LAEYFVHRTGHGIGLCVHEEPY-IVAGNELPLVAGMAFSIEP 340 (378)
T ss_dssp HHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTT--CGGGCCSCSEEECSSSSSEEEE-ECTTCCCBCCTTBEEEECC
T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC--CCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCEEEECC
T ss_conf 999999999999876898939999999999999869--9876999971437777477986-4899988619998999879
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCEECCCCCCCCHHHH
Q ss_conf 3112468999987991469997999991798414166665555441
Q 001468 412 GFQNLQTENKNPKTQKFSVLLADTVIVGEKVPDIVTSKSSKAVKDV 457 (1073)
Q Consensus 412 G~~~l~~~~~~~~~~~~gi~ieDTVlVte~G~evLT~~~pk~l~~I 457 (1073)
|+| + ++.+|++|||||+||++|+++||. .|+++..+
T Consensus 341 giy-~--------~g~~gvriEd~v~Vt~~G~e~Lt~-~p~~l~~~ 376 (378)
T 4ege_A 341 GIY-F--------PGRWGARIEDIVVVTENGALSVNN-RPHELMVV 376 (378)
T ss_dssp EEE-E--------TTTEEEECBEEEEEETTEEEESCC-SCCSCEEE
T ss_pred EEE-E--------CCCCEEEEEEEEEEECCCCEECCC-CCCCCEEC
T ss_conf 899-6--------896489994299990996758989-99742781
No 6
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=455.82 Aligned_cols=356 Identities=19% Similarity=0.297 Sum_probs=308.1
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCEEEEEECCCCCHHHHHH
Q ss_conf 99999999975038788799669999279999862002454444744288678299999599189999288411599998
Q 001468 34 KRLKMLYSHWTEHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGYEFPETIMVFLKKQIHFLCSQKKASLLEVIK 113 (1073)
Q Consensus 34 ~Rl~rL~~~~k~~~~~~~~giDaLli~~g~~~~~~~Y~ks~al~~wLtGye~p~tlliit~~~~~ll~s~kK~~~le~~~ 113 (1073)
+|+++|++.|++ .++|++++..+. + . +.+.+.|||||..++++++++++..+++++.. +..++.
T Consensus 2 ~Rl~~Lr~~m~~------~~lDa~li~~~~-n--i----~~~~~~YLtGf~~~~~~llI~~~~~~L~~d~r---~~~~a~ 65 (359)
T 2zsg_A 2 DRSERLIQLISE------EGIDAFLIMNIE-N--S----ARASSVYFSGFTGSFSIILISENTRLLITDSR---YTVQAK 65 (359)
T ss_dssp CCHHHHHHHHHT------TTCCEEEEEEST-T--T----THHHHHHHHCCCSSCEEEEEETTEEEEEECTT---THHHHH
T ss_pred HHHHHHHHHHHH------CCCCEEEEECHH-H--C----CCCCCEEEECCCCCCEEEEEECCCCEEEECCC---CHHHHH
T ss_conf 389999998887------799699997846-7--1----65567167635888879999899878998852---278887
Q ss_pred HHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCC
Q ss_conf 51343465499997278778889759999999421015899999989993789972888999999974159548837866
Q 001468 114 KSAKEAVGIEVVIHVKGKTDDGSGLMDKIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKLKKANFALSDVSNG 193 (1073)
Q Consensus 114 ~~~~~~~~v~i~~~~kd~~d~~~~~~~~l~~~lk~~~~~~~~~~~kIGv~~kd~~~g~f~~~l~~~l~~~~~e~vDvs~~ 193 (1073)
.. ..++++.+. .+ ..+..+.+.|+. ..+++||++.. .++..++..|.+.++ +.+++++++.
T Consensus 66 ~~----~~~~v~~~~---~~---~~~~~l~~~L~~------~~~~~vgvd~~-~~~~~~~~~l~~~l~--~~~~v~~~~~ 126 (359)
T 2zsg_A 66 QE----TDFEVREVK---GG---DFIDVLKKTVND------LKIKTIALEEE-RVSLSLFRRISSAFG--DRKFIGIDDE 126 (359)
T ss_dssp HH----CCSEEEEC---------CCHHHHHHHHHH------TTCCEEEECGG-GSBHHHHHHHHHHTT--TCEEEECHHH
T ss_pred HC----CCCEEEEEC---CC---CHHHHHHHHHHH------CCCCEEEEECC-CCCHHHHHHHHHHCC--CCEEEECHHH
T ss_conf 17----897799946---75---669999999985------69988999488-688999999984479--8679987565
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCE
Q ss_conf 55445668999999999999999999899999984630123689899999999999997233023211668777778776
Q 001468 194 FSDLFAIKDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILEPARIKVKLKAENVDICYPPI 273 (1073)
Q Consensus 194 i~~lRaVKs~~EI~~iR~Aa~is~~~m~~~~~~~i~~iid~e~gvte~eLa~~ie~~l~~~~k~~~~~g~~~~d~~y~pI 273 (1073)
+..+|+||+++||+.||+|+++++.++. .+...++ +|+||.+|++.++..+.. .|.. .++|++|
T Consensus 127 i~~lr~iK~~~Ei~~~r~a~~~~~~~~~-~~~~~~~------~G~te~e~~~~~~~~~~~-------~g~~--~~~f~~i 190 (359)
T 2zsg_A 127 VKQMRMVKDEGEIEKIKQAIEISERAFL-ETVQQIR------AGMTEKEIAALLEYTMRK-------EGAE--GVAFDTI 190 (359)
T ss_dssp HHHHHHBCCHHHHHHHHHHHHHHHHHHH-HHHTTCC------TTCBHHHHHHHHHHHHHH-------TTCS--EESSCCE
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHH-HHHHHCC------CCCCHHHHHHHHHHHHHH-------CCCC--CCCCCCE
T ss_conf 5432447999999999999999999999-9998666------998799999999999998-------6999--8998877
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEECCEEEEEEEEEEEC-CCHHHHHHHHHHHHHHHHHHHHCCCCCCH
Q ss_conf 88589988788876777321147744099960225688675459999961-89679999999999999999983899989
Q 001468 274 FQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCSNVARTFLID-ANTVQSKAYEVLLKAHEAAISALKSGNKV 352 (1073)
Q Consensus 274 VqSG~~~~l~~~~~s~d~~L~~G~~diIivdlG~~y~gY~sdi~RT~~Vg-Ps~eq~~~y~~ll~a~~~~i~~LkpGvt~ 352 (1073)
|++|.|++. +|+.|+++.|+.| |+|++|+|++|+|||+|++|||++| |+++|+++|+.+++++.++++++|||+++
T Consensus 191 v~~g~~~~~-~h~~~~~~~l~~g--d~v~iD~g~~~~gy~~D~tRt~~~G~~~~~~~~~~~~v~~~~~~~~~~~~pG~~~ 267 (359)
T 2zsg_A 191 VASGCRSAL-PHGKASDKVVERG--DVIVIDFGATYENYCADITRVVSIGEPSDEVKEVHSIVLEAQERALKIAKAGVTG 267 (359)
T ss_dssp EEEGGGGGS-TTCCCCSCBCCTT--CEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCCTTCBH
T ss_pred EEECCCCCC-CCCCCCCCCCCCC--CEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH
T ss_conf 997365463-5578988554899--9899987699898998516899848999999999999999999999973698989
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEE
Q ss_conf 89999999999941972203667761110345454588745678995010883787941311246899998799146999
Q 001468 353 SAAYKAASTVVEKDAPELAANLTRNAGTGIGLEFRESGLSLNAKNDRILKAGMVFNVSLGFQNLQTENKNPKTQKFSVLL 432 (1073)
Q Consensus 353 ~dVy~aa~~~i~~~gp~l~~~~~~~~GhgIGle~~E~p~~I~~~n~~~Lk~GMVf~IepG~~~l~~~~~~~~~~~~gi~i 432 (1073)
++|+.++++++.+.| +..+|.|++|||||+++||.| .|+++++.+|++||||++|||+| + ++.+|+++
T Consensus 268 ~~v~~~~~~~~~~~g--~~~~~~h~~GHgiGl~~he~p-~i~~~~~~~l~~gmv~tiEPgiy-~--------~~~~gvri 335 (359)
T 2zsg_A 268 KLLDSVAREFIREKG--YGEFFGHSLGHGIGLEVHEGP-AISFRNDSPLPENVVFTVEPGIY-L--------EGKFGIRI 335 (359)
T ss_dssp HHHHHHHHHHHHHTT--CGGGBCSCSEEECSSSSSEEE-EESTTCCCBCCTTBEEEECCEEE-E--------TTTEEEEC
T ss_pred HHHHHHHHHHHHHCC--CCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCEEEECCEEE-E--------CCCCEEEE
T ss_conf 999999999999769--966589998363576657798-76899988869998999979899-7--------89867998
Q ss_pred EEEEEEECCCCEECCCCCCCCHHH
Q ss_conf 799999179841416666555544
Q 001468 433 ADTVIVGEKVPDIVTSKSSKAVKD 456 (1073)
Q Consensus 433 eDTVlVte~G~evLT~~~pk~l~~ 456 (1073)
||||+||++|+++||. .|+++..
T Consensus 336 Ed~v~vt~~g~e~Lt~-~~~~l~~ 358 (359)
T 2zsg_A 336 EEDVVLKEQGCEILTT-LPRSIFV 358 (359)
T ss_dssp BEEEEEETTEEEECCC-SCCSCEE
T ss_pred EEEEEECCCCCEECCC-CCCCCEE
T ss_conf 5179993994368988-9865165
No 7
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=1.00 E-value=1 Score=445.70 Aligned_cols=348 Identities=21% Similarity=0.298 Sum_probs=297.5
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCC-----CCEEEEEECC-CEEEEEECCCCC
Q ss_conf 9999999997503878879966999927999986200245444474428867-----8299999599-189999288411
Q 001468 34 KRLKMLYSHWTEHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGYEF-----PETIMVFLKK-QIHFLCSQKKAS 107 (1073)
Q Consensus 34 ~Rl~rL~~~~k~~~~~~~~giDaLli~~g~~~~~~~Y~ks~al~~wLtGye~-----p~tlliit~~-~~~ll~s~kK~~ 107 (1073)
+|+++|++.|++ .++|+++++.+. + +.|||||.. +.++++++.+ +++++++..+.
T Consensus 1 ~R~~~l~~~m~~------~~~d~~li~~~~-n-----------~~yltG~~~~~~~~~~~~l~i~~~~~~~l~~~~~~~- 61 (356)
T 1wn1_A 1 MRLEKFIHLLGE------RGFDGALISPGT-N-----------LYYLTGLRLHEVGERLAILAVSAEGDYRFLAPSLYE- 61 (356)
T ss_dssp CHHHHHHHHHHH------TTCSEEEECSSH-H-----------HHHHHCCCCSCCTTSCCEEEEETTSCEEEEEEGGGT-
T ss_pred CHHHHHHHHHHH------CCCCEEEECCCC-C-----------CEEECCCCCCCCCCCEEEEEEECCCCEEEEECCCCH-
T ss_conf 979999998887------899699988975-5-----------266138867998985089999689918999891058-
Q ss_pred HHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEE
Q ss_conf 59999851343465499997278778889759999999421015899999989993789972888999999974159548
Q 001468 108 LLEVIKKSAKEAVGIEVVIHVKGKTDDGSGLMDKIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKLKKANFAL 187 (1073)
Q Consensus 108 ~le~~~~~~~~~~~v~i~~~~kd~~d~~~~~~~~l~~~lk~~~~~~~~~~~kIGv~~kd~~~g~f~~~l~~~l~~~~~e~ 187 (1073)
+++. . ++++.|. +.. ..+..+.+.|+.. +...++||++ +.++..++..|.+. + +.++
T Consensus 62 --~~~~-----~--~~v~~~~----~~~-~~~~~l~~~l~~~----~~~~~~i~~~--~~~~~~~~~~l~~~-~--~~~~ 118 (356)
T 1wn1_A 62 --NVVN-----N--FPATFWH----DGE-NPYAKLREILEEL----GISKGRILIE--DTMRADWLIGIMKL-G--KFTF 118 (356)
T ss_dssp --TTTT-----T--SCEEEEC----TTS-CHHHHHHHHHHHT----TCSSEEEEEC--TTSBHHHHHHHGGG-S--CEEE
T ss_pred --HHHH-----C--CEEEEEC----CCC-CHHHHHHHHHHHH----CCCCCEEEEE--CCCCHHHHHHHHCC-C--CCEE
T ss_conf --9861-----7--8499971----777-7799999999972----5788779994--77689999999707-8--9769
Q ss_pred EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCC
Q ss_conf 83786655445668999999999999999999899999984630123689899999999999997233023211668777
Q 001468 188 SDVSNGFSDLFAIKDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILEPARIKVKLKAENVD 267 (1073)
Q Consensus 188 vDvs~~i~~lRaVKs~~EI~~iR~Aa~is~~~m~~~~~~~i~~iid~e~gvte~eLa~~ie~~l~~~~k~~~~~g~~~~d 267 (1073)
+|++..+..+|++|+++||+.||+|+++++.++. .+...++ +|+||.+|++.++..+.. . . ..
T Consensus 119 ~~~~~~i~~~R~iK~~~Ei~~~r~A~~i~~~a~~-~~~~~i~------~G~te~el~~~~~~~~~~-------~-~--~~ 181 (356)
T 1wn1_A 119 QPLSSLIKELRMIKDKEEVKMMEHASRIADKVFE-EILTWDL------IGMKERELALKIELLIRE-------L-S--DG 181 (356)
T ss_dssp EETHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHH-HHTTSCC------TTCBHHHHHHHHHHHHHH-------H-S--SE
T ss_pred EECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH-HHHHHCC------CCCCHHHHHHHHHHHHHH-------H-C--CC
T ss_conf 8858999999867999999999999999999999-9998766------998299999999999997-------1-7--57
Q ss_pred CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEECCEEEEEEEEEEEC-CCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 77877688589988788876777321147744099960225688675459999961-89679999999999999999983
Q 001468 268 ICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCSNVARTFLID-ANTVQSKAYEVLLKAHEAAISAL 346 (1073)
Q Consensus 268 ~~y~pIVqSG~~~~l~~~~~s~d~~L~~G~~diIivdlG~~y~gY~sdi~RT~~Vg-Ps~eq~~~y~~ll~a~~~~i~~L 346 (1073)
.+|+|||+||.|++. +|+.|+++.|+.| |+|++|+|++|+|||||++|||++| |+++|+++|+.+++++.++++++
T Consensus 182 ~~f~~iv~~g~n~~~-~H~~~~~~~l~~g--d~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~ 258 (356)
T 1wn1_A 182 IAFEPIVASGENAAN-PHHEPGERKIRKG--DIIILDYGARWKGYCSDITRTIGLGELDERLVKIYEVVKDAQESAFKAV 258 (356)
T ss_dssp ESSCCEEEEGGGGGC-TTCCCCSCBCCTT--CEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEECCCCC-CCCCCCCCEECCC--CEEEEEEEEEECCEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 899857998143136-5578888730699--9799999998898974117999758999999999999999999999983
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCC
Q ss_conf 89998989999999999941972203667761110345454588745678995010883787941311246899998799
Q 001468 347 KSGNKVSAAYKAASTVVEKDAPELAANLTRNAGTGIGLEFRESGLSLNAKNDRILKAGMVFNVSLGFQNLQTENKNPKTQ 426 (1073)
Q Consensus 347 kpGvt~~dVy~aa~~~i~~~gp~l~~~~~~~~GhgIGle~~E~p~~I~~~n~~~Lk~GMVf~IepG~~~l~~~~~~~~~~ 426 (1073)
|||+++++|+.++++++.+.| |..+|.|++|||||+++||.|. +.++++.+|++||||++|||+| + ++
T Consensus 259 ~pG~~~~~i~~~~~~~~~~~g--~~~~~~h~~GHgiGl~~he~p~-i~~~~~~~l~~Gmv~tiEPgiy-~--------~g 326 (356)
T 1wn1_A 259 REGIKAKDVDSRAREVISKAG--YGEYFIHRTGHGLGLDVHEEPY-IGPDGEVILKNGMTFTIEPGIY-V--------PG 326 (356)
T ss_dssp BTTSBHHHHHHHHHHHHHTTT--CGGGCCSCSEEECSSSSSEEEE-ESTTCCCBCCTTCEEEECCEEE-E--------TT
T ss_pred CCCCCHHHHHHHHHHHHHHCC--CCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCEEEECCEEE-E--------CC
T ss_conf 698929999999999999869--9665899970427775577862-3799998848998999999458-6--------79
Q ss_pred EEEEEEEEEEEEECCCCEECCCCCCCCHHH
Q ss_conf 146999799999179841416666555544
Q 001468 427 KFSVLLADTVIVGEKVPDIVTSKSSKAVKD 456 (1073)
Q Consensus 427 ~~gi~ieDTVlVte~G~evLT~~~pk~l~~ 456 (1073)
.+|+++||||+||++|+++||. +|+++..
T Consensus 327 ~~gvriEd~v~Vt~~g~e~Lt~-~p~~l~~ 355 (356)
T 1wn1_A 327 LGGVRIEDDIVVDEGKGRRLTK-AERELII 355 (356)
T ss_dssp TEEEECBEEEEEETTEEEESCC-CCCSCCB
T ss_pred CCEEEEEEEEEEECCCCEECCC-CCCCCEE
T ss_conf 8479995079990991378989-9976254
No 8
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=1.00 E-value=1 Score=444.65 Aligned_cols=406 Identities=17% Similarity=0.191 Sum_probs=296.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCC----CCCCCCC-CCCCCEEEECCCCCCCEEEEEEC--CCE
Q ss_conf 5679999999999999997503878879966999927999----9862002-45444474428867829999959--918
Q 001468 25 YAINLDNFSKRLKMLYSHWTEHNSDLWGDSNALAVATPPV----SEDLRYL-KSSALNVWLVGYEFPETIMVFLK--KQI 97 (1073)
Q Consensus 25 i~id~~~f~~Rl~rL~~~~k~~~~~~~~giDaLli~~g~~----~~~~~Y~-ks~al~~wLtGye~p~tlliit~--~~~ 97 (1073)
..|+.++|.+|+++|++.|++.... .+.+++++..+.. ++++.|+ ++.+.++|||||..|++++++.. +++
T Consensus 17 ~~i~~~e~~~Rr~~l~~~~~~~~~~--~~~~~~il~~~~~~~~~~~d~~y~frq~s~f~YLtG~~~p~~~~vi~~~~~~~ 94 (494)
T 2iw2_A 17 LKVPLALFALNRQRLCERLRKNPAV--QAGSIVVLQGGEETQRYCTDTGVLFRQESFFHWAFGVTEPGCYGVIDVDTGKS 94 (494)
T ss_dssp CCEETHHHHHHHHHHHHHHHHCTTC--CTTCEEEEECCCCEESTTSCCEECCCCCHHHHHHHCCCSSSCEEEEETTTCCE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCC--CCCEEEEEECCCCEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCEE
T ss_conf 8879999999999999987765013--68539999578520323788878756786625442889888699999159938
Q ss_pred EEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEE-CCCCCCHHHHHHH
Q ss_conf 999928841159999851343465499997278778889759999999421015899999989993-7899728889999
Q 001468 98 HFLCSQKKASLLEVIKKSAKEAVGIEVVIHVKGKTDDGSGLMDKIFGAVNDQSKSGGQNSPVVGHI-SREAPEGKLLETW 176 (1073)
Q Consensus 98 ~ll~s~kK~~~le~~~~~~~~~~~v~i~~~~kd~~d~~~~~~~~l~~~lk~~~~~~~~~~~kIGv~-~kd~~~g~f~~~l 176 (1073)
+++++..... .+.|... ..+.+.+.. ....+.. ..+..+.+.|+. ....+|++. +.+..++.+...+
T Consensus 95 ~L~~~~~~~~-~~~w~g~---~~~~~~~~~-~~~~~~~-~~~~~l~~~L~~------~~~~~i~~~~g~~~~~~~~~~~~ 162 (494)
T 2iw2_A 95 TLFVPRLPAS-HATWMGK---IHSKEHFKE-KYAVDDV-QYVDEIASVLTS------QKPSVLLTLRGVNTDSGSVCREA 162 (494)
T ss_dssp EEEECCCCGG-GTTTTCC---CCCHHHHHH-HHTCSEE-EEGGGHHHHHHH------TCCSCEECCCCBCTTTCCBCCCC
T ss_pred EEEECCCCHH-HHHHCCC---CCCHHHHHH-HHCCCCC-CCHHHHHHHHHH------CCCCEEEEECCCCCCCCCCCCHH
T ss_conf 9997889977-7640488---899899999-8598555-669999999875------37886999467465410001476
Q ss_pred -HHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf -9997415954883786655445668999999999999999999899999984630123689899999999999997233
Q 001468 177 -NEKLKKANFALSDVSNGFSDLFAIKDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILEPA 255 (1073)
Q Consensus 177 -~~~l~~~~~e~vDvs~~i~~lRaVKs~~EI~~iR~Aa~is~~~m~~~~~~~i~~iid~e~gvte~eLa~~ie~~l~~~~ 255 (1073)
...+.....+.+++++.+..+|+|||++||++||+|++++..++. .++..++ +|++|.+|++.++..+...
T Consensus 163 ~~~~l~~~~~~~~~~~~~l~~~R~iKs~~EI~~mr~A~~i~~~a~~-~~~~~i~------~G~tE~el~~~~~~~~~~~- 234 (494)
T 2iw2_A 163 SFDGISKFEVNNTILHPEIVECRVFKTDMELEVLRYTNKISSEAHR-EVMKAVK------VGMKEYELESLFEHYCYSR- 234 (494)
T ss_dssp CCTTGGGSCEECSSHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHH-HHHHHCC------TTCBHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH-HHHHHCC------CCCCHHHHHHHHHHHHHHH-
T ss_conf 6533232345404579999998855999999999999799999999-9999752------7983999999999999996-
Q ss_pred HHHHHCCCCCCCCCCCCEEEECCCCCCCCCC----CCCCCCCCCCCCCEEEEEECEEECCEEEEEEEEEEE-C-CCHHHH
Q ss_conf 0232116687777787768858998878887----677732114774409996022568867545999996-1-896799
Q 001468 256 RIKVKLKAENVDICYPPIFQSGGEFDLKPSA----SSNDNYLYYDSTSVIICAVGSRYNSYCSNVARTFLI-D-ANTVQS 329 (1073)
Q Consensus 256 k~~~~~g~~~~d~~y~pIVqSG~~~~l~~~~----~s~d~~L~~G~~diIivdlG~~y~gY~sdi~RT~~V-g-Ps~eq~ 329 (1073)
.|. ..++|+|||+||.|++. +|+ .|+++.|+.| |+|++|+|++|+|||||++|||+| | |+++|+
T Consensus 235 -----~G~--~~~~~~~iv~sG~n~~~-~Hy~~~g~p~~~~l~~G--d~vliD~G~~~~gY~sDitRT~~v~G~~s~~q~ 304 (494)
T 2iw2_A 235 -----GGM--RHSSYTCICGSGENSAV-LHYGHAGAPNDRTIQNG--DMCLFDMGGEYYCFASDITCSFPANGKFTADQK 304 (494)
T ss_dssp -----HCC--CEESSCCEEEEGGGGGC-SSCSSTTSCSCCBCCTT--CEEEEEECEEBTTBCCCEEEEEETTSCCCHHHH
T ss_pred -----CCC--CCCCCCCEEEECCCCCC-CCCCCCCCCCCCCCCCC--CEEEEEEEEEECCEEEEEEEEEEECCCCCHHHH
T ss_conf -----899--76897866887675454-45656689877706798--989999608899999970599997882999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH----CCC-----------CCC-CCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 999999999999999838999898999999999994----197-----------220-366776111034545458874-
Q 001468 330 KAYEVLLKAHEAAISALKSGNKVSAAYKAASTVVEK----DAP-----------ELA-ANLTRNAGTGIGLEFRESGLS- 392 (1073)
Q Consensus 330 ~~y~~ll~a~~~~i~~LkpGvt~~dVy~aa~~~i~~----~gp-----------~l~-~~~~~~~GhgIGle~~E~p~~- 392 (1073)
++|++++++++++++++|||+++++|+.++++++.+ .|- .+. .+|+|++||+||+++||.+.+
T Consensus 305 ~~y~~v~~a~~~~i~~~kpG~~~~di~~~a~~~i~~~l~~~G~~~g~~~~~~~~g~~~~~~~H~~GHgiGl~vHd~~~~~ 384 (494)
T 2iw2_A 305 AVYEAVLRSSRAVMGAMKPGVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGGYP 384 (494)
T ss_dssp HHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCSSSSSCSCSSC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999999999981799929999999999999999975986565777875365631689898187885323588766
Q ss_pred ----------C-CCCCCCEECCCCEEEEEECCCCCCC--------C------CCC---CCCCEEEEEEEEEEEEECCCCE
Q ss_conf ----------5-6789950108837879413112468--------9------999---8799146999799999179841
Q 001468 393 ----------L-NAKNDRILKAGMVFNVSLGFQNLQT--------E------NKN---PKTQKFSVLLADTVIVGEKVPD 444 (1073)
Q Consensus 393 ----------I-~~~n~~~Lk~GMVf~IepG~~~l~~--------~------~~~---~~~~~~gi~ieDTVlVte~G~e 444 (1073)
+ +.++.++|++||||+||||+|..+. + ++. ...+.+|++|||||+||++|++
T Consensus 385 ~~~~~~~~p~~~~~~~~~~L~~GMV~tiEPGiy~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~gGvRiED~vlVte~G~e 464 (494)
T 2iw2_A 385 EGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFFNREVLQRFRGFGGVRIEEDVVVTDSGIE 464 (494)
T ss_dssp TTCCCCCSTTGGGCSCCCBCCTTCEEEECCEEECCHHHHHHHHHCHHHHTTBCHHHHHHHTTCCEEECBEEEEECSSSEE
T ss_pred CCCCCCCCCCCCCCCCCCEECCCCEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHCCCCEEEEEEEEEECCCCCE
T ss_conf 66556555566667888881797789989904646010001103653111134201666279887885228999499676
Q ss_pred ECCCCCCCCHHHHCCCCCC
Q ss_conf 4166665555441152489
Q 001468 445 IVTSKSSKAVKDVAYSFNE 463 (1073)
Q Consensus 445 vLT~~~pk~l~~Is~~~~d 463 (1073)
+||. +|+++.+|..+|..
T Consensus 465 ~LT~-~p~~~~~ie~~m~~ 482 (494)
T 2iw2_A 465 LLTC-VPRTVEEIEACMAG 482 (494)
T ss_dssp ECCC-CCCSHHHHHHHHTT
T ss_pred ECCC-CCCCHHHHHHHHCC
T ss_conf 7988-99769999999702
No 9
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=1.00 E-value=1 Score=442.65 Aligned_cols=343 Identities=19% Similarity=0.310 Sum_probs=298.6
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCE-E-EEEECCCEEEEEECCCCCHH
Q ss_conf 999999999997503878879966999927999986200245444474428867829-9-99959918999928841159
Q 001468 32 FSKRLKMLYSHWTEHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGYEFPET-I-MVFLKKQIHFLCSQKKASLL 109 (1073)
Q Consensus 32 f~~Rl~rL~~~~k~~~~~~~~giDaLli~~g~~~~~~~Y~ks~al~~wLtGye~p~t-l-liit~~~~~ll~s~kK~~~l 109 (1073)
+.+|+++|++.|++ .++|+++++.+. + +.|||||..++. + ++++.+..++++.+. +
T Consensus 4 m~~R~~~l~~~m~~------~~~da~li~~~~-n-----------~~yltg~~~~~~~~~llv~~~~~~l~~~~~---~- 61 (351)
T 1wy2_A 4 MNEKVKKIIEFMDK------NSIDAVLIAKNP-N-----------VYYISGASPLAGGYILITGESATLYVPELE---Y- 61 (351)
T ss_dssp CCHHHHHHHHHHHH------TTCSEEEECSHH-H-----------HHHHHSCCCSSCCEEEEETTEEEEEEEHHH---H-
T ss_pred HHHHHHHHHHHHHH------CCCCEEEECCCC-C-----------CEEECCCCCCCCCEEEEEECCCCEEEECCH---H-
T ss_conf 99999999998877------899899989977-7-----------567148998888589999799769998966---8-
Q ss_pred HHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 99985134346549999727877888975999999942101589999998999378997288899999997415954883
Q 001468 110 EVIKKSAKEAVGIEVVIHVKGKTDDGSGLMDKIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKLKKANFALSD 189 (1073)
Q Consensus 110 e~~~~~~~~~~~v~i~~~~kd~~d~~~~~~~~l~~~lk~~~~~~~~~~~kIGv~~kd~~~g~f~~~l~~~l~~~~~e~vD 189 (1073)
+++... ..++++.|. . ++.+.+.|+ ..++||++ +.++..++..|.+.++ ..+++|
T Consensus 62 ~~~~~~----~~~~v~~~~--------~-~~~l~~~l~--------~~~~ig~e--~~~~~~~~~~l~~~~~--~~~~~~ 116 (351)
T 1wy2_A 62 EMAKEE----SNIPVEKFK--------K-MDEFYKALE--------GIKSLGIE--SSLPYGFIEELKKKAN--IKEFKK 116 (351)
T ss_dssp HHHHHH----CSSCEEEES--------S-HHHHHHHHT--------TCSEEEEC--TTCBHHHHHHHHHHSC--CCEEEE
T ss_pred HHHHHC----CCCEEEEEC--------C-HHHHHHHHC--------CCCEEEEC--CCCCHHHHHHHHHHCC--CCEEEE
T ss_conf 998625----897499848--------6-999999973--------69889994--7679999999986489--876888
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCC
Q ss_conf 78665544566899999999999999999989999998463012368989999999999999723302321166877777
Q 001468 190 VSNGFSDLFAIKDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILEPARIKVKLKAENVDIC 269 (1073)
Q Consensus 190 vs~~i~~lRaVKs~~EI~~iR~Aa~is~~~m~~~~~~~i~~iid~e~gvte~eLa~~ie~~l~~~~k~~~~~g~~~~d~~ 269 (1073)
++..+..+|++|+++||+.||+|+++++.++. .+...++ +|+||.+|++.++..+.. .|.. .++
T Consensus 117 ~~~~i~~~r~iK~~~Ei~~~r~A~~i~~~a~~-~~~~~i~------~G~te~el~~~~~~~~~~-------~g~~--~~~ 180 (351)
T 1wy2_A 117 VDDVIRDMRIIKSEKEIKIIEKACEIADKAVM-AAIEEIT------EGKKEREVAAKVEYLMKM-------NGAE--KPA 180 (351)
T ss_dssp CHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHH-HHHHHCC------TTCBHHHHHHHHHHHHHH-------TTCS--EES
T ss_pred CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH-HHHHHCC------CCCCHHHHHHHHHHHHHH-------CCCC--CCC
T ss_conf 58989999967999999999999999999999-9998664------998599999999999997-------6998--789
Q ss_pred CCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEECCEEEEEEEEEEEC-CCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 877688589988788876777321147744099960225688675459999961-8967999999999999999998389
Q 001468 270 YPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCSNVARTFLID-ANTVQSKAYEVLLKAHEAAISALKS 348 (1073)
Q Consensus 270 y~pIVqSG~~~~l~~~~~s~d~~L~~G~~diIivdlG~~y~gY~sdi~RT~~Vg-Ps~eq~~~y~~ll~a~~~~i~~Lkp 348 (1073)
|+|||+||.|++. +|+.|+++.|+.| |+|++|+|++|+|||||++|||++| |+++|+++|+.+++++.++++++||
T Consensus 181 f~~iv~~g~n~~~-~H~~~~~~~l~~g--d~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~p 257 (351)
T 1wy2_A 181 FDTIIASGYRSAL-PHGVASDKRIERG--DLVVIDLGALYQHYNSDITRTIVVGSPNEKQKEIYEIVLEAQKKAVESAKP 257 (351)
T ss_dssp SCCEEEEGGGGGS-TTCBCCSCBCCTT--CEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred CCCEEEECCCCCC-CCCCCCCCCCCCC--CEEEEEEEEEECCEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 8988997500035-5678878663799--989999878899998524689986999999999999999999999997279
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCEE
Q ss_conf 99898999999999994197220366776111034545458874567899501088378794131124689999879914
Q 001468 349 GNKVSAAYKAASTVVEKDAPELAANLTRNAGTGIGLEFRESGLSLNAKNDRILKAGMVFNVSLGFQNLQTENKNPKTQKF 428 (1073)
Q Consensus 349 Gvt~~dVy~aa~~~i~~~gp~l~~~~~~~~GhgIGle~~E~p~~I~~~n~~~Lk~GMVf~IepG~~~l~~~~~~~~~~~~ 428 (1073)
|+++++|+.++++++.+.| +..+|.|++|||||+++||.| .|+++++.+|++||||++|||+| + ++.+
T Consensus 258 G~~~~~v~~~~~~~~~~~g--~~~~~~h~~GHgiGl~~hE~p-~i~~~~~~~l~~Gmv~tiEPgiy-~--------~g~~ 325 (351)
T 1wy2_A 258 GITAKELDSIARNIIAEYG--YGEYFNHSLGHGVGLEVHEWP-RVSQYDETVLREGMVITIEPGIY-I--------PKIG 325 (351)
T ss_dssp TCBHHHHHHHHHHHHHHTT--CGGGCCSCSEEECSSSSSEEE-EESTTCCCBCCTTCEEEECCEEE-E--------TTTE
T ss_pred CCCHHHHHHHHHHHHHHCC--CCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCEEEECCEEE-E--------CCCC
T ss_conf 8959999999999999769--966589995113687757797-65899998848999999999778-5--------7987
Q ss_pred EEEEEEEEEEECCCCE-ECCCCCCCCH
Q ss_conf 6999799999179841-4166665555
Q 001468 429 SVLLADTVIVGEKVPD-IVTSKSSKAV 454 (1073)
Q Consensus 429 gi~ieDTVlVte~G~e-vLT~~~pk~l 454 (1073)
|+++||||+|| +|++ +||. .|+++
T Consensus 326 gvriEd~v~Vt-~G~e~~Lt~-~p~~l 350 (351)
T 1wy2_A 326 GVRIEDTILIT-KNGSKRLTK-TEREL 350 (351)
T ss_dssp EEECBEEEEEE-TTEEEESCC-SCSCC
T ss_pred EEEEEEEEEEC-CCCEECCCC-CCCCC
T ss_conf 69995289999-996552779-98555
No 10
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=1.00 E-value=1 Score=439.82 Aligned_cols=377 Identities=17% Similarity=0.244 Sum_probs=306.1
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCC---CCCCCCC-CCCCCEEEECCCCCCCEEEEEECC----CEEE
Q ss_conf 9999999999999997503878879966999927999---9862002-454444744288678299999599----1899
Q 001468 28 NLDNFSKRLKMLYSHWTEHNSDLWGDSNALAVATPPV---SEDLRYL-KSSALNVWLVGYEFPETIMVFLKK----QIHF 99 (1073)
Q Consensus 28 d~~~f~~Rl~rL~~~~k~~~~~~~~giDaLli~~g~~---~~~~~Y~-ks~al~~wLtGye~p~tlliit~~----~~~l 99 (1073)
+.++|.+|+++|.+.|.. .+ .+++..+.. +.+..|+ ++.+.++||||+..|+++++++++ +.++
T Consensus 2 ~~~~~~~RR~~l~~~l~~------~~--~~i~~~~~~~~~~~d~~~~frq~s~f~YltG~~~~~~~~v~~~~~~~~~~~l 73 (427)
T 3ig4_A 2 KSKFFAQNRERLVNTLPD------ES--ITILFAGQAPHMSADAHYKFVPNRNFYYVTGIDEPNVIFMLKKFGNSVEETL 73 (427)
T ss_dssp CHHHHHHHHHHHHTTSCS------SE--EEEEECCCCCEEETTEECCCCCCHHHHHHHCCCSTTCEEEEEEETTEEEEEE
T ss_pred CHHHHHHHHHHHHHHCCC------CC--EEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEE
T ss_conf 879999999999985767------97--8999778731257997774028997088068898888999971588864899
Q ss_pred EEECCCCC---------HHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHH-HHHHHCCCCCCCCCCEEEEECCC---
Q ss_conf 99288411---------599998513434654999972787788897599999-99421015899999989993789---
Q 001468 100 LCSQKKAS---------LLEVIKKSAKEAVGIEVVIHVKGKTDDGSGLMDKIF-GAVNDQSKSGGQNSPVVGHISRE--- 166 (1073)
Q Consensus 100 l~s~kK~~---------~le~~~~~~~~~~~v~i~~~~kd~~d~~~~~~~~l~-~~lk~~~~~~~~~~~kIGv~~kd--- 166 (1073)
|+.++-.. -.+.+.. ..+++...+. +.+...+ ..+.. ....+|++....
T Consensus 74 fv~~~~~~~~~w~g~r~~~~~a~~----~~~~~~v~~~--------~~~~~~l~~~~~~------~~~~~i~~~~~~~~~ 135 (427)
T 3ig4_A 74 FIEKSDPVMEKWVGKTVSNEEAEK----ISGIKKVIYL--------DSFEKTMSNIFFT------ENVKHLYLDLECREW 135 (427)
T ss_dssp EECCCCTTGGGTTCCCCCHHHHHH----HHCCSEEEEG--------GGHHHHHHHHHTT------TCCCEEEECCCCCCT
T ss_pred EECCCCCCCEEEECCCCCHHHHHH----CCCCCEEEEH--------HHHHHHHHHHHHC------CCCCEEEEECCCCCC
T ss_conf 936898342687588876899986----5799799772--------3399999999735------787499994785433
Q ss_pred ----CCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Q ss_conf ----9728889999999741595488378665544566899999999999999999989999998463012368989999
Q 001468 167 ----APEGKLLETWNEKLKKANFALSDVSNGFSDLFAIKDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSS 242 (1073)
Q Consensus 167 ----~~~g~f~~~l~~~l~~~~~e~vDvs~~i~~lRaVKs~~EI~~iR~Aa~is~~~m~~~~~~~i~~iid~e~gvte~e 242 (1073)
..+..++..+.+.++ +.+++|+++.+..+|+|||++||+.||+|+++++.++. .++..++ +|++|.+
T Consensus 136 ~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~i~~lR~iKs~~EI~~mr~A~~i~~~a~~-~~~~~i~------pG~tE~e 206 (427)
T 3ig4_A 136 KGTETKTLAFAKHVREQYP--HVTIGNVYPNICELRVFKTDEEIEIIKEAIAVTKDGIY-NVLKHAK------ADMMEYE 206 (427)
T ss_dssp TCCCCHHHHHHHHHHHHCT--TCEEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHH-HHHHHCC------SSEEHHH
T ss_pred CCCCCCCHHHHHHHHHHCC--CCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH-HHHHHCC------CCCCHHH
T ss_conf 3212237999999985489--97476839999999834999999999999999999999-9999732------7987999
Q ss_pred HHHHHHHHHHCCCHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEECCEEEEEEEEEEE
Q ss_conf 99999999972330232116687777787768858998878887677732114774409996022568867545999996
Q 001468 243 LMDETEKAILEPARIKVKLKAENVDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCSNVARTFLI 322 (1073)
Q Consensus 243 La~~ie~~l~~~~k~~~~~g~~~~d~~y~pIVqSG~~~~l~~~~~s~d~~L~~G~~diIivdlG~~y~gY~sdi~RT~~V 322 (1073)
|++.++..+.. .|.. .++|+|||+||.|.+. +|+.++++.|+.| |+|++|+|+.|+|||||++|||+|
T Consensus 207 l~~~~~~~~~~-------~G~~--~~~f~~ivasG~n~~~-~H~~~~~~~l~~G--dlvliD~G~~~~gY~sDitRT~~v 274 (427)
T 3ig4_A 207 LEAQFDFTLKS-------SGIK--HHAFNTILASGKNATV-LHYEDNDAQIQNG--DLVLLDLGAQKDYYNADISYTFPA 274 (427)
T ss_dssp HHHHHHHHHHH-------TTCC--EESSCCEEEEGGGGGS-TTCCCCCSEECTT--CEEEEEECEEETTEECCEEEEEET
T ss_pred HHHHHHHHHHH-------CCCC--CCCCCCEEEECCCCCC-CCCCCCCCCCCCC--CEEEEEEEEEECCEEEEEEEEEEC
T ss_conf 99999999998-------6998--7899988997764344-4567655667899--989999626988489877899854
Q ss_pred -C-CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC----C-----CCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -1-8967999999999999999998389998989999999999941----9-----722036677611103454545887
Q 001468 323 -D-ANTVQSKAYEVLLKAHEAAISALKSGNKVSAAYKAASTVVEKD----A-----PELAANLTRNAGTGIGLEFRESGL 391 (1073)
Q Consensus 323 -g-Ps~eq~~~y~~ll~a~~~~i~~LkpGvt~~dVy~aa~~~i~~~----g-----p~l~~~~~~~~GhgIGle~~E~p~ 391 (1073)
| |+++|+++|++++++|+++++++|||+++++|+.++++++.+. | +.+..+|+|++||+||+++||.|.
T Consensus 275 ~G~~s~~~~~~y~~vl~a~~~~i~~~kpG~~~~di~~~a~~~i~~~~~~~G~~~~~~~~~~~~~Hg~GH~iGl~vhe~~~ 354 (427)
T 3ig4_A 275 NGTFSSRQKQIYNIVLNALKETTEIIKPGLKFAALNEHAKKVLAEGCKAVGLIQEDEELSKYYYHGVSHFLGLDTHDVGT 354 (427)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHHHTCCTTCBTHHHHHHHHHHHHHHHHHHTSCSSGGGGGGTCCSCSCCBCSSSSSCCCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 99899999999999999999999971699969999999999999867654876575154356899877748858775899
Q ss_pred CCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCEECCCCCCCCHHHHCCCCCC
Q ss_conf 456789950108837879413112468999987991469997999991798414166665555441152489
Q 001468 392 SLNAKNDRILKAGMVFNVSLGFQNLQTENKNPKTQKFSVLLADTVIVGEKVPDIVTSKSSKAVKDVAYSFNE 463 (1073)
Q Consensus 392 ~I~~~n~~~Lk~GMVf~IepG~~~l~~~~~~~~~~~~gi~ieDTVlVte~G~evLT~~~pk~l~~Is~~~~d 463 (1073)
.+..+|++||||+||||+| +++ ..+|++|||||+||++|+++||..+|+++.+|...|..
T Consensus 355 ----~~~~~L~~GMV~tiEPgiy-~~~-------~g~GvriEd~vlVt~~G~e~LT~~~pk~~~~IE~~m~~ 414 (427)
T 3ig4_A 355 ----YKDRVLEEGMVITIEPGLY-IEE-------ESIGIRIEDDILVTKDGHENLSKDIIREVEEIEEFMRE 414 (427)
T ss_dssp ----CTTCBCCTTCEEEECCEEE-EGG-------GTEEEECBEEEEECSSSEEETTTTSCCSHHHHHHHHHH
T ss_pred ----CCCCEECCCCEEEECCEEE-ECC-------CCEEEEEEEEEEEECCCCEECCCCCCCCHHHHHHHHCC
T ss_conf ----9998828998999889789-779-------96299990099992996868899999999999999706
Done!