Query 001472
Match_columns 1072
No_of_seqs 839 out of 3547
Neff 5.8
Searched_HMMs 29240
Date Tue Mar 26 16:13:29 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001472.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_774-778//hhsearch_pdb/001472hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 1.0 1 1 336.6 48.7 327 12-355 15-360 (611)
2 1vyh_C Platelet-activating fac 1.0 1 1 330.8 42.4 287 8-295 101-409 (410)
3 1nr0_A Actin interacting prote 1.0 1 1 330.5 47.3 314 4-325 48-380 (611)
4 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 324.6 50.1 288 7-296 607-912 (1249)
5 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 317.7 47.0 339 3-354 645-1038(1249)
6 2ymu_A WD-40 repeat protein; u 1.0 1 1 317.0 53.9 348 6-373 7-395 (577)
7 3dm0_A Maltose-binding peripla 1.0 1 1 315.9 45.5 289 7-296 374-692 (694)
8 3ow8_A WD repeat-containing pr 1.0 1 1 314.0 43.8 293 4-296 21-320 (321)
9 1got_B GT-beta; complex (GTP-b 1.0 1 1 311.5 46.3 288 5-294 45-340 (340)
10 3frx_A Guanine nucleotide-bind 1.0 1 1 311.4 44.9 291 5-297 7-317 (319)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=336.65 Aligned_cols=327 Identities=15% Similarity=0.195 Sum_probs=274.4
Q ss_pred ECCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCC-
Q ss_conf 5479986999991189939999978990999987999427995079989479999389999999986991999986999-
Q 001472 12 VAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDLEES- 90 (1072)
Q Consensus 12 ~gHsg~VtsIafSPdg~~lLaTGs~DGtI~IWDi~t~~~i~sl~~hs~~ItsLafSPdg~~LatGS~DGsI~IWDl~tg- 90 (1072)
..+.+.+.+++|+|+| ++|++++ ++.|++|++.++.....+.+|...|.+++|+|+|++|++|+.||.|++||+.++
T Consensus 15 ~~~~g~~~~~~~spdg-~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~ 92 (611)
T 1nr0_A 15 RTARGTAVVLGNTPAG-DKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTT 92 (611)
T ss_dssp CCCTTCCCCCEECTTS-SEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTT
T ss_pred CCCCCCEEEEEECCCC-CEEEECC-CCEEEEECCCCCCCCEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCC
T ss_conf 7406823697667999-9799679-9979994578724273765899865999999999689999489978994898984
Q ss_pred -EEEEEEECCCCCEEEEEECCCCCEEEEEECC----CEEEEEECCCCEEEEEEECCCCCEEEEEECCCCC-EEEEEECCC
Q ss_conf -0699980789882799993799899999689----8099998899907999816898748999968999-999996699
Q 001472 91 -KMVRTLTGHKSNCTAVEFHPFGEFFASGCMD----TNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGR-WVVSGGFDN 164 (1072)
Q Consensus 91 -k~i~tl~~h~~~VtsIafSPdgk~LaSgs~D----GsI~IWDlrsgk~i~~l~~h~~~VtsIafSPDG~-~LvTGS~DG 164 (1072)
.....+..|...|.+++|+|++++|++++.+ +.|++|| .+.....+.+|...|.+++|+|++. .|++++.|+
T Consensus 93 ~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~ 170 (611)
T 1nr0_A 93 HILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDN 170 (611)
T ss_dssp CCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTS
T ss_pred CEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEE--CCCCCCEECCCCCCCEEEEECCCCCEEEEEEECCC
T ss_conf 1566762255784489998999997999989977366999963--89976325478898369998899982999992898
Q ss_pred EEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEC-------CCCCCEEEEEEECC
Q ss_conf 29999989991689953048865899985999699999789939999889980887407-------99878479999179
Q 001472 165 VVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTR-------PEVTGVHAITFHPD 237 (1072)
Q Consensus 165 sI~IWDl~tgk~i~~l~~h~g~ItsLafSPdg~lLaTgS~DGtIrIWDl~tgk~i~~l~-------~h~~~VtsIafSPD 237 (1072)
.|++||...++....+.+|...|.+++|+|++.+|++++.|+.|++||+.+++.+..+. .|...|.+++|+|+
T Consensus 171 ~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spd 250 (611)
T 1nr0_A 171 TVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD 250 (611)
T ss_dssp CEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTT
T ss_pred EEEEEECCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCC
T ss_conf 09999799975766520025716999997999989999899919998899982866513664323566787899999799
Q ss_pred CCEEEEEE-CCCEEEEEECCCEEECCCCCCCC----EEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCC
Q ss_conf 99999997-99499999358722101126887----04569945999999998699399998479932443127899999
Q 001472 238 GRTLFSGF-DDNLKVYSWEPVICHDSVDMGWS----TLGDLCINDGKLLGCSFYRNSVGIWVADVSHVEPYGVGAPEPDQ 312 (1072)
Q Consensus 238 Gk~LasGs-dg~I~Iwdl~s~~~~~~i~~~~s----~is~l~spDGklLasgs~DGsIrIWDids~~l~~~~~~~~~~~~ 312 (1072)
|++|++++ |+.+++|++....+...+..+.. ..... .++..+++++.|+.+++|+...+...... .+|.
T Consensus 251 g~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~s~s~d~~i~~~~~~~~~~~~~~----~gh~ 324 (611)
T 1nr0_A 251 GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGII--WTKQALVSISANGFINFVNPELGSIDQVR----YGHN 324 (611)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEE--ECSSCEEEEETTCCEEEEETTTTEEEEEE----CCCS
T ss_pred CCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCEEEEEE--ECCCEEEEEECCCCEEEEECCCCCCCEEE----CCCC
T ss_conf 99999990898099996888701344047887664068999--73887999958996899968899744698----3788
Q ss_pred CCEEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCCCCEEE
Q ss_conf 8731999979999422299989616760689635776440699
Q 001472 313 SICTEVKFNPPGSHSLEKVGIIGRSTSGFRSTSPDYETKDIKT 355 (1072)
Q Consensus 313 s~ItsVaFSPDGs~lLa~VlaiG~stG~~r~ivpD~es~eIv~ 355 (1072)
..+.+++|+|||+ .++.+...|.++.+ |..++....
T Consensus 325 ~~v~~l~~spdg~-----~l~s~s~D~~v~~W--d~~~~~~~~ 360 (611)
T 1nr0_A 325 KAITALSSSADGK-----TLFSADAEGHINSW--DISTGISNR 360 (611)
T ss_dssp SCEEEEEECTTSS-----EEEEEETTSCEEEE--ETTTCCEEE
T ss_pred CCEEEEEEECCCC-----EEEEEECCCCEEEE--ECCCCCEEE
T ss_conf 8889999918999-----89999589849999--788792563
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=1.00 E-value=1 Score=330.84 Aligned_cols=287 Identities=22% Similarity=0.428 Sum_probs=263.3
Q ss_pred EEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEEC
Q ss_conf 89985479986999991189939999978990999987999427995079989479999389999999986991999986
Q 001472 8 LQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWDL 87 (1072)
Q Consensus 8 Ik~L~gHsg~VtsIafSPdg~~lLaTGs~DGtI~IWDi~t~~~i~sl~~hs~~ItsLafSPdg~~LatGS~DGsI~IWDl 87 (1072)
...+.+|.+.|+|++|+|++ .+|++|+.||.|++||+.++.....+.+|...|.+++|++++.+|++|+.||.|++||+
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~-~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF 179 (410)
T ss_dssp SCEEECCSSCEEEEEECSSS-SEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred EEEECCCCCCEEEEEECCCC-CEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEEC
T ss_conf 07661667768999996999-98999938985999989999377888166786878998599999999918981999958
Q ss_pred CCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEE
Q ss_conf 99906999807898827999937998999996898099998899907999816898748999968999999996699299
Q 001472 88 EESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVK 167 (1072)
Q Consensus 88 ~tgk~i~tl~~h~~~VtsIafSPdgk~LaSgs~DGsI~IWDlrsgk~i~~l~~h~~~VtsIafSPDG~~LvTGS~DGsI~ 167 (1072)
.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.++.++..+.+|...+.++.|++++.+|++++.|+.|+
T Consensus 180 ~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~ 259 (410)
T 1vyh_C 180 QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259 (410)
T ss_dssp TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCEEE
T ss_conf 99826699828999778999967999999996899699998999948999927886289999989999999991899099
Q ss_pred EEECCCCCEEEEEEECCCCEEEEEECCC--------------------CCEEEEEECCCEEEEEECCCCCEEEEECCCCC
Q ss_conf 9998999168995304886589998599--------------------96999997899399998899808874079987
Q 001472 168 VWDLTAGKLLHDFKFHEGHIRSIDFHPL--------------------EFLLATGSADRTVKFWDLETFELIGSTRPEVT 227 (1072)
Q Consensus 168 IWDl~tgk~i~~l~~h~g~ItsLafSPd--------------------g~lLaTgS~DGtIrIWDl~tgk~i~~l~~h~~ 227 (1072)
+||+.+++....+..|...+.+++|+|+ +.+|++|+.|+.|++||+.++.++..+..|..
T Consensus 260 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~ 339 (410)
T 1vyh_C 260 VWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339 (410)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred EEECCCCCEEEEECCCCCEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCC
T ss_conf 99898974366733787458999985865543101212555556678888999993898499998899966999977888
Q ss_pred CEEEEEEECCCCEEEEEECC-CEEEEEECCCEEECCCCCCCC-EEEEEEECCCCEEEEEECCCEEEEEEC
Q ss_conf 84799991799999999799-499999358722101126887-045699459999999986993999984
Q 001472 228 GVHAITFHPDGRTLFSGFDD-NLKVYSWEPVICHDSVDMGWS-TLGDLCINDGKLLGCSFYRNSVGIWVA 295 (1072)
Q Consensus 228 ~VtsIafSPDGk~LasGsdg-~I~Iwdl~s~~~~~~i~~~~s-~is~l~spDGklLasgs~DGsIrIWDi 295 (1072)
.|.+++|+|+|.+|++++.+ .+++|++....+...+..+.. +....+.+++.+|++++.||.|++|+.
T Consensus 340 ~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp CEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred CEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEEC
T ss_conf 5899999499899999959792999989999068998477786899998289999999927994899737
No 3
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=330.55 Aligned_cols=314 Identities=19% Similarity=0.261 Sum_probs=264.7
Q ss_pred CCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCC--CEEEEEECCCCCEEEEEECCCCCEEEEEECC--
Q ss_conf 672489985479986999991189939999978990999987999--4279950799894799993899999999869--
Q 001472 4 RGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKP--TALMSLCGLSSPVDSVAFDSAEVLVLAGAST-- 79 (1072)
Q Consensus 4 tG~~Ik~L~gHsg~VtsIafSPdg~~lLaTGs~DGtI~IWDi~t~--~~i~sl~~hs~~ItsLafSPdg~~LatGS~D-- 79 (1072)
.+..+..|.+|.+.|.+++|+|+| ++|++|+.||.|+|||+..+ .....+..|...|.+++|+|++++|++++.+
T Consensus 48 ~~~~~~~~~~h~~~v~~~~~spdg-~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~ 126 (611)
T 1nr0_A 48 SLTDTEIYTEHSHQTTVAKTSPSG-YYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRE 126 (611)
T ss_dssp CSSCCEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSS
T ss_pred CCCCCEEECCCCCCEEEEEECCCC-CEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCC
T ss_conf 724273765899865999999999-6899994899789948989841566762255784489998999997999989977
Q ss_pred --CEEEEEECCCCEEEEEEECCCCCEEEEEECCCCC-EEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCE
Q ss_conf --9199998699906999807898827999937998-9999968980999988999079998168987489999689999
Q 001472 80 --GVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGE-FFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRW 156 (1072)
Q Consensus 80 --GsI~IWDl~tgk~i~tl~~h~~~VtsIafSPdgk-~LaSgs~DGsI~IWDlrsgk~i~~l~~h~~~VtsIafSPDG~~ 156 (1072)
+.|++|| .+.....+.+|...|.+++|+|++. .|++++.|+.|++||...+++...+.+|...|.+++|+|++.+
T Consensus 127 ~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~ 204 (611)
T 1nr0_A 127 RFGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSL 204 (611)
T ss_dssp CSEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSE
T ss_pred CEEEEEEEE--CCCCCCEECCCCCCCEEEEECCCCCEEEEEEECCCEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCE
T ss_conf 366999963--899763254788983699988999829999928980999979997576652002571699999799998
Q ss_pred EEEEECCCEEEEEECCCCCEEEEEE-------ECCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCC---C
Q ss_conf 9999669929999989991689953-------04886589998599969999978993999988998088740799---8
Q 001472 157 VVSGGFDNVVKVWDLTAGKLLHDFK-------FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPE---V 226 (1072)
Q Consensus 157 LvTGS~DGsI~IWDl~tgk~i~~l~-------~h~g~ItsLafSPdg~lLaTgS~DGtIrIWDl~tgk~i~~l~~h---~ 226 (1072)
|++++.|+.|++||+.+++.+..+. +|.+.|.+++|+|++.+|++++.|+.|++||+.+++.+..+..+ .
T Consensus 205 las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~ 284 (611)
T 1nr0_A 205 FASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIE 284 (611)
T ss_dssp EEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGG
T ss_pred EEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCC
T ss_conf 99998999199988999828665136643235667878999997999999999089809999688870134404788766
Q ss_pred CCEEEEEEECCCCEEEEE-ECCCEEEEEECCCEEECCCCCCC-CEEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEE
Q ss_conf 784799991799999999-79949999935872210112688-7045699459999999986993999984799324431
Q 001472 227 TGVHAITFHPDGRTLFSG-FDDNLKVYSWEPVICHDSVDMGW-STLGDLCINDGKLLGCSFYRNSVGIWVADVSHVEPYG 304 (1072)
Q Consensus 227 ~~VtsIafSPDGk~LasG-sdg~I~Iwdl~s~~~~~~i~~~~-s~is~l~spDGklLasgs~DGsIrIWDids~~l~~~~ 304 (1072)
.....+.| ++..++++ .++.+++|+.....+...+..+. .+....++++|++|++++.|+.|++|++..+......
T Consensus 285 ~~~~~~~~--~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~ 362 (611)
T 1nr0_A 285 DQQLGIIW--TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVF 362 (611)
T ss_dssp GCEEEEEE--CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECS
T ss_pred CEEEEEEE--CCCEEEEEECCCCEEEEECCCCCCCEEECCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEC
T ss_conf 40689997--3887999958996899968899744698378888899999189998999958984999978879256321
Q ss_pred CCCCCCCCCCEEEEEECCCCC
Q ss_conf 278999998731999979999
Q 001472 305 VGAPEPDQSICTEVKFNPPGS 325 (1072)
Q Consensus 305 ~~~~~~~~s~ItsVaFSPDGs 325 (1072)
...|...+.+++|++++.
T Consensus 363 ---~~~h~~~v~~~~~s~~~~ 380 (611)
T 1nr0_A 363 ---PDVHATMITGIKTTSKGD 380 (611)
T ss_dssp ---SCSCSSCEEEEEECTTSC
T ss_pred ---CCCCCCEEEEEEECCCCC
T ss_conf ---667765078999878996
No 4
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=324.61 Aligned_cols=288 Identities=18% Similarity=0.319 Sum_probs=228.6
Q ss_pred EEEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEE
Q ss_conf 48998547998699999118993999997899099998799942799507998947999938999999998699199998
Q 001472 7 KLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLWD 86 (1072)
Q Consensus 7 ~Ik~L~gHsg~VtsIafSPdg~~lLaTGs~DGtI~IWDi~t~~~i~sl~~hs~~ItsLafSPdg~~LatGS~DGsI~IWD 86 (1072)
....+.+|.+.|++++|+|++ +++++|+.||.|++|++.++..+..+.+|...|.+++|+|++.+|++++.||.|++||
T Consensus 607 ~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd 685 (1249)
T 3sfz_A 607 SRLVVRPHTDAVYHACFSQDG-QRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWD 685 (1249)
T ss_dssp CSEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CEEEEECCCCCEEEEEECCCC-CEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCEEEEEE
T ss_conf 227871666648999987999-9899994889499999899978887606777789999926999899981899599987
Q ss_pred CCCCEEEEEEECCCCCEEEEEECC--CCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCC
Q ss_conf 699906999807898827999937--998999996898099998899907999816898748999968999999996699
Q 001472 87 LEESKMVRTLTGHKSNCTAVEFHP--FGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSGGFDN 164 (1072)
Q Consensus 87 l~tgk~i~tl~~h~~~VtsIafSP--dgk~LaSgs~DGsI~IWDlrsgk~i~~l~~h~~~VtsIafSPDG~~LvTGS~DG 164 (1072)
+.+++.+..+.+|...|.++.|+| ++.++++++.||.|++||+.++.++..+.+|...|.+++|+|++.++++++.||
T Consensus 686 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg 765 (1249)
T 3sfz_A 686 SATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADG 765 (1249)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSS
T ss_pred CCCCCEEEEECCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEECCCCCHHHEECCCCCCEEEEEEECCCCEEEEEECCC
T ss_conf 79993689995899737999984089965999980897099998999634220127779788999925999899997898
Q ss_pred EEEEEECCCCCEEEEEEEC-------------CCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEC-CCCCCEE
Q ss_conf 2999998999168995304-------------8865899985999699999789939999889980887407-9987847
Q 001472 165 VVKVWDLTAGKLLHDFKFH-------------EGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTR-PEVTGVH 230 (1072)
Q Consensus 165 sI~IWDl~tgk~i~~l~~h-------------~g~ItsLafSPdg~lLaTgS~DGtIrIWDl~tgk~i~~l~-~h~~~Vt 230 (1072)
.|++||+.++.....+... ...+.+++|+|++..+++++ ++.+.+||+.++..+..+. .|...+.
T Consensus 766 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~~~~~v~ 844 (1249)
T 3sfz_A 766 TLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHTGHHSTIQ 844 (1249)
T ss_dssp EEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEECSSSSCCC
T ss_pred EEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEC-CCCEEEEEECCCCCEEEECCCCCCCEE
T ss_conf 5999968888655302023210246776445650179999978998899975-895999995689723577478777607
Q ss_pred EEEEECCCCEEEEEE-CCCEEEEEECCCEEECCCCCCCC-EEEEEEECCCCEEEEEECCCEEEEEECC
Q ss_conf 999917999999997-99499999358722101126887-0456994599999999869939999847
Q 001472 231 AITFHPDGRTLFSGF-DDNLKVYSWEPVICHDSVDMGWS-TLGDLCINDGKLLGCSFYRNSVGIWVAD 296 (1072)
Q Consensus 231 sIafSPDGk~LasGs-dg~I~Iwdl~s~~~~~~i~~~~s-~is~l~spDGklLasgs~DGsIrIWDid 296 (1072)
+++|+|++.++++++ ++.+++|++........+..+.. +....+++++.++++++.||.|++|+..
T Consensus 845 ~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 845 YCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETK 912 (1249)
T ss_dssp EEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHH
T ss_pred EEEECCCCCEEEEEECCCEEEEEECCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECC
T ss_conf 99982788889999479869999867895653227876656899998999989999589728988746
No 5
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=317.65 Aligned_cols=339 Identities=20% Similarity=0.341 Sum_probs=286.9
Q ss_pred CCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECC--CCCEEEEEECCC
Q ss_conf 667248998547998699999118993999997899099998799942799507998947999938--999999998699
Q 001472 3 KRGYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDS--AEVLVLAGASTG 80 (1072)
Q Consensus 3 ktG~~Ik~L~gHsg~VtsIafSPdg~~lLaTGs~DGtI~IWDi~t~~~i~sl~~hs~~ItsLafSP--dg~~LatGS~DG 80 (1072)
.++..+..+.+|.+.|.+++|+|++ ++|++++.||.|++||+.+++.+..+.+|...|.+++|++ ++.++++++.||
T Consensus 645 ~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~ 723 (1249)
T 3sfz_A 645 ETGEKLLDIKAHEDEVLCCAFSSDD-SYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDF 723 (1249)
T ss_dssp TTCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTS
T ss_pred CCCCEEEEECCCCCCEEEEEEECCC-CEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCCEEEEEEECCC
T ss_conf 9997888760677778999992699-989998189959998779993689995899737999984089965999980897
Q ss_pred EEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEEECC-------------CCCEEE
Q ss_conf 1999986999069998078988279999379989999968980999988999079998168-------------987489
Q 001472 81 VIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGH-------------TRGINT 147 (1072)
Q Consensus 81 sI~IWDl~tgk~i~tl~~h~~~VtsIafSPdgk~LaSgs~DGsI~IWDlrsgk~i~~l~~h-------------~~~Vts 147 (1072)
.|++||+.+++....+.+|...|.+++|+|+++++++++.||.|++||+..+.....+... ...+.+
T Consensus 724 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 803 (1249)
T 3sfz_A 724 FLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKC 803 (1249)
T ss_dssp CEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCC
T ss_pred EEEEEECCCCCHHHEECCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCEEEE
T ss_conf 09999899963422012777978899992599989999789859999688886553020232102467764456501799
Q ss_pred EEECCCCCEEEEEECCCEEEEEECCCCCEEEEEE-ECCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCC
Q ss_conf 9996899999999669929999989991689953-048865899985999699999789939999889980887407998
Q 001472 148 IRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFK-FHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEV 226 (1072)
Q Consensus 148 IafSPDG~~LvTGS~DGsI~IWDl~tgk~i~~l~-~h~g~ItsLafSPdg~lLaTgS~DGtIrIWDl~tgk~i~~l~~h~ 226 (1072)
++|+|++.++++++ ++.+.+||+.++.....+. .|...+.+++|+|++.++++++.||.|++|++.++..+..+..|.
T Consensus 804 ~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~ 882 (1249)
T 3sfz_A 804 CSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHL 882 (1249)
T ss_dssp CCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCS
T ss_pred EEECCCCCEEEEEC-CCCEEEEEECCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEECCCCC
T ss_conf 99978998899975-89599999568972357747877760799982788889999479869999867895653227876
Q ss_pred CCEEEEEEECCCCEEEEEE-CCCEEEEEECCCEEE--------------------------------------CCCCCCC
Q ss_conf 7847999917999999997-994999993587221--------------------------------------0112688
Q 001472 227 TGVHAITFHPDGRTLFSGF-DDNLKVYSWEPVICH--------------------------------------DSVDMGW 267 (1072)
Q Consensus 227 ~~VtsIafSPDGk~LasGs-dg~I~Iwdl~s~~~~--------------------------------------~~i~~~~ 267 (1072)
..|.+++|+|+|.++++++ ++.+++|+....... .......
T Consensus 883 ~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 962 (1249)
T 3sfz_A 883 SWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEA 962 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCS
T ss_pred CCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCEEEECCCC
T ss_conf 65689999899998999958972898874665201021133103689759986899813776248984476508972567
Q ss_pred CEEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEECC
Q ss_conf 70456994599999999869939999847993244312789999987319999799994222999896167606896357
Q 001472 268 STLGDLCINDGKLLGCSFYRNSVGIWVADVSHVEPYGVGAPEPDQSICTEVKFNPPGSHSLEKVGIIGRSTSGFRSTSPD 347 (1072)
Q Consensus 268 s~is~l~spDGklLasgs~DGsIrIWDids~~l~~~~~~~~~~~~s~ItsVaFSPDGs~lLa~VlaiG~stG~~r~ivpD 347 (1072)
......++++++++++++.+|.|.+|++..+...... .+|...+.+++|+|||. .++.+...|.++.+ +
T Consensus 963 ~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~----~~h~~~v~~l~~s~dg~-----~l~s~~~dg~i~vw--d 1031 (1249)
T 3sfz_A 963 QVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSG----VGHKKAVRHIQFTADGK-----TLISSSEDSVIQVW--N 1031 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEEC----CCCSSCCCCEEECSSSS-----CEEEECSSSBEEEE--E
T ss_pred CEEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEC----CCCCCCEEEEEECCCCC-----EEEEECCCCEEEEE--E
T ss_conf 2789999589977999869998899975787234430----36777168999989999-----89998699879999--8
Q ss_pred CCCCCEE
Q ss_conf 7644069
Q 001472 348 YETKDIK 354 (1072)
Q Consensus 348 ~es~eIv 354 (1072)
..+++..
T Consensus 1032 ~~~~~~~ 1038 (1249)
T 3sfz_A 1032 WQTGDYV 1038 (1249)
T ss_dssp TTTTEEE
T ss_pred CCCCCEE
T ss_conf 7999668
No 6
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=1.00 E-value=1 Score=316.97 Aligned_cols=348 Identities=25% Similarity=0.432 Sum_probs=255.5
Q ss_pred CEEEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEE
Q ss_conf 24899854799869999911899399999789909999879994279950799894799993899999999869919999
Q 001472 6 YKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKLW 85 (1072)
Q Consensus 6 ~~Ik~L~gHsg~VtsIafSPdg~~lLaTGs~DGtI~IWDi~t~~~i~sl~~hs~~ItsLafSPdg~~LatGS~DGsI~IW 85 (1072)
++.+.|.||.+.|+|++|+|+| ++|++|+.|+.|+|||. +++.+..+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus 7 ~e~~~L~GH~~~V~~~a~spdg-~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vW 84 (577)
T 2ymu_A 7 KERNRLEAHSSSVRGVAFSPDG-QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLW 84 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTS-SCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEEEEECCCCCCEEEEEECCCC-CEEEEEECCCEEEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEE
T ss_conf 8943987899857999998998-99999938998999979-997899996898998999998999999999698979999
Q ss_pred ECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEE-------------------------------
Q ss_conf 8699906999807898827999937998999996898099998899907-------------------------------
Q 001472 86 DLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGC------------------------------- 134 (1072)
Q Consensus 86 Dl~tgk~i~tl~~h~~~VtsIafSPdgk~LaSgs~DGsI~IWDlrsgk~------------------------------- 134 (1072)
|+ +++.+..+.+|...|.+++|+|++++|++++.|+.+++|+......
T Consensus 85 d~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 163 (577)
T 2ymu_A 85 NR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTV 163 (577)
T ss_dssp ET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEE
T ss_pred EC-CCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEECCCCCCEEEECCCCCCCEEEEEEECCCCCCEECCCCCCE
T ss_conf 89-99789999789998899999899998999807983352023552001104777743555420377632002555310
Q ss_pred ---------EEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECC
Q ss_conf ---------99981689874899996899999999669929999989991689953048865899985999699999789
Q 001472 135 ---------IHTYKGHTRGINTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSAD 205 (1072)
Q Consensus 135 ---------i~~l~~h~~~VtsIafSPDG~~LvTGS~DGsI~IWDl~tgk~i~~l~~h~g~ItsLafSPdg~lLaTgS~D 205 (1072)
......+...+.++.|+|++.++++++.|+.|++||. +++.+..+..|...+.+++|+|++.+|++++.|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d 242 (577)
T 2ymu_A 164 KLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD 242 (577)
T ss_dssp EEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred ECCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCEEEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEECC
T ss_conf 0000000000002687763566541699778999859998999949-996899994688988999997999999999189
Q ss_pred CEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEEEEEC-CCEEEEEECCCEEECCCCCCCCEEEEEEECCCCEEEEE
Q ss_conf 93999988998088740799878479999179999999979-94999993587221011268870456994599999999
Q 001472 206 RTVKFWDLETFELIGSTRPEVTGVHAITFHPDGRTLFSGFD-DNLKVYSWEPVICHDSVDMGWSTLGDLCINDGKLLGCS 284 (1072)
Q Consensus 206 GtIrIWDl~tgk~i~~l~~h~~~VtsIafSPDGk~LasGsd-g~I~Iwdl~s~~~~~~i~~~~s~is~l~spDGklLasg 284 (1072)
+.|++|+.. ++.+..+..|...+.+++|+|++..+++++. +.+++|+...............+....+.+++++++++
T Consensus 243 ~~i~~w~~~-~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~ 321 (577)
T 2ymu_A 243 KTVKLWNRN-GQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASA 321 (577)
T ss_dssp SCEEEECTT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CEEEEEECC-CCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEE
T ss_conf 989999599-9799998068898799999689999999959997999948995899970688976999999999999999
Q ss_pred ECCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCC
Q ss_conf 86993999984799324431278999998731999979999422299989616760689635776440699763689994
Q 001472 285 FYRNSVGIWVADVSHVEPYGVGAPEPDQSICTEVKFNPPGSHSLEKVGIIGRSTSGFRSTSPDYETKDIKTIYVDSTGGK 364 (1072)
Q Consensus 285 s~DGsIrIWDids~~l~~~~~~~~~~~~s~ItsVaFSPDGs~lLa~VlaiG~stG~~r~ivpD~es~eIv~i~iDs~gGe 364 (1072)
+.|+.|++|+.+......+ ..+...+.+++|+|+|. .++.|...|.++.+-. ++++...... -..
T Consensus 322 ~~d~~i~~w~~~~~~~~~~-----~~~~~~v~~~~~s~~g~-----~l~~~~~dg~v~~~~~---~~~~~~~~~~--~~~ 386 (577)
T 2ymu_A 322 SDDKTVKLWNRNGQHLQTL-----TGHSSSVWGVAFSPDGQ-----TIASASDDKTVKLWNR---NGQLLQTLTG--HSS 386 (577)
T ss_dssp ETTSCEEEEETTSCEEEEE-----CCCSSCEEEEEECTTSS-----EEEEEETTSEEEEEET---TCCEEEEEEC--CSS
T ss_pred ECCCEEEEEECCCCEEEEE-----ECCCCCEEEEEECCCCC-----EEEEEECCCEEEEECC---CCCEEEEECC--CCC
T ss_conf 6999599996999725787-----47889779999989999-----9999969998999908---9978998527--889
Q ss_pred CCEEEEECC
Q ss_conf 202321068
Q 001472 365 PVASQKIGP 373 (1072)
Q Consensus 365 pv~~~~~~P 373 (1072)
++..+.++|
T Consensus 387 ~v~~~~~s~ 395 (577)
T 2ymu_A 387 SVRGVAFSP 395 (577)
T ss_dssp CEEEEEECT
T ss_pred CEEEEEECC
T ss_conf 748999989
No 7
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=1.00 E-value=1 Score=315.91 Aligned_cols=289 Identities=24% Similarity=0.405 Sum_probs=253.0
Q ss_pred EEEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCC-----CEEEEEECCCCCEEEEEECCCCCEEEEEECCCE
Q ss_conf 489985479986999991189939999978990999987999-----427995079989479999389999999986991
Q 001472 7 KLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKP-----TALMSLCGLSSPVDSVAFDSAEVLVLAGASTGV 81 (1072)
Q Consensus 7 ~Ik~L~gHsg~VtsIafSPdg~~lLaTGs~DGtI~IWDi~t~-----~~i~sl~~hs~~ItsLafSPdg~~LatGS~DGs 81 (1072)
....+.+|.+.|+|++|++++..+|++|+.||.|++|++... .....+.+|...|.+++|++++.+|++|+.||.
T Consensus 374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE 453 (694)
T ss_dssp EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred HHHHCCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEECCCCCCEEEEEECCCCCEEEEEECCCC
T ss_conf 12110467740699986699888899980899489997568875555333242588884799999799999999808992
Q ss_pred EEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEE---ECCCCCEEEEEECCCC--CE
Q ss_conf 999986999069998078988279999379989999968980999988999079998---1689874899996899--99
Q 001472 82 IKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTY---KGHTRGINTIRFTPDG--RW 156 (1072)
Q Consensus 82 I~IWDl~tgk~i~tl~~h~~~VtsIafSPdgk~LaSgs~DGsI~IWDlrsgk~i~~l---~~h~~~VtsIafSPDG--~~ 156 (1072)
|++||+.++.....+.+|...|.+++|+|++++|++++.|+.|++||.......... .+|...|.+++|+|++ .+
T Consensus 454 v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 533 (694)
T 3dm0_A 454 LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT 533 (694)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCE
T ss_pred EEEEECCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCCEEECCCCCCCCCCEEEEEEECCCCCCE
T ss_conf 89997999951368867999889999908999899994889799997899854043037788878679999917988655
Q ss_pred EEEEECCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEEC
Q ss_conf 99996699299999899916899530488658999859996999997899399998899808874079987847999917
Q 001472 157 VVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHP 236 (1072)
Q Consensus 157 LvTGS~DGsI~IWDl~tgk~i~~l~~h~g~ItsLafSPdg~lLaTgS~DGtIrIWDl~tgk~i~~l~~h~~~VtsIafSP 236 (1072)
+++++.|+.|++||+..++....+..|.+.|.+++|+|++.+|++++.||.|++||+.+++.+..+..+ ..+.+++|+|
T Consensus 534 l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp 612 (694)
T 3dm0_A 534 IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVIHALCFSP 612 (694)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCS-SCEEEEEECS
T ss_pred EEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEECCC-CCEEEEEECC
T ss_conf 999968985999989999278998678888889999189898999958994999988999567883389-9478999859
Q ss_pred CCCEEEEEECCCEEEEEECCCEEECCCCCCC--------------------CEEEEEEECCCCEEEEEECCCEEEEEECC
Q ss_conf 9999999979949999935872210112688--------------------70456994599999999869939999847
Q 001472 237 DGRTLFSGFDDNLKVYSWEPVICHDSVDMGW--------------------STLGDLCINDGKLLGCSFYRNSVGIWVAD 296 (1072)
Q Consensus 237 DGk~LasGsdg~I~Iwdl~s~~~~~~i~~~~--------------------s~is~l~spDGklLasgs~DGsIrIWDid 296 (1072)
++.+++++.++++++|++........+.... ......++++|++|++|+.||.|++|++.
T Consensus 613 ~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 613 NRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp SSSEEEEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCCEEEEECCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCEEEEEECC
T ss_conf 98689997699789998999987332002456532002456645677404775148986899989997589849998535
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=1.00 E-value=1 Score=314.01 Aligned_cols=293 Identities=23% Similarity=0.378 Sum_probs=266.9
Q ss_pred CCCEEEEEECCCCCEEEEEEECCC---CCEEEEEECCCEEEEEECCCCCE--EEEEECCCCCEEEEEECCCCCEEEEEEC
Q ss_conf 672489985479986999991189---93999997899099998799942--7995079989479999389999999986
Q 001472 4 RGYKLQEFVAHSANVNCISIGKKA---CRFLITGGDDQKVNLWAIGKPTA--LMSLCGLSSPVDSVAFDSAEVLVLAGAS 78 (1072)
Q Consensus 4 tG~~Ik~L~gHsg~VtsIafSPdg---~~lLaTGs~DGtI~IWDi~t~~~--i~sl~~hs~~ItsLafSPdg~~LatGS~ 78 (1072)
.|..++.+.+|.+.|.+++|++++ ..+|++|+.|+.|++|++..... ...+.+|...|.+++|++++.++++++.
T Consensus 21 ~g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~ 100 (321)
T 3ow8_A 21 YGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSL 100 (321)
T ss_dssp CEEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEET
T ss_pred HHHEEEECCCCCCCEEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEEC
T ss_conf 20045521568896799998248888888899984999899988989974366600567788899998899998999937
Q ss_pred CCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEE
Q ss_conf 99199998699906999807898827999937998999996898099998899907999816898748999968999999
Q 001472 79 TGVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVV 158 (1072)
Q Consensus 79 DGsI~IWDl~tgk~i~tl~~h~~~VtsIafSPdgk~LaSgs~DGsI~IWDlrsgk~i~~l~~h~~~VtsIafSPDG~~Lv 158 (1072)
|+.|++||+.+++.+..+..+...+.+++|+|++++|++++.+|.|++|++..+.....+..+...+.+++|+|++++|+
T Consensus 101 D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la 180 (321)
T 3ow8_A 101 DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA 180 (321)
T ss_dssp TSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEE
T ss_pred CCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEEEECCCCCEEE
T ss_conf 98099997899979899937985679999999999899983899199998679946677438994299999989999999
Q ss_pred EEECCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCC
Q ss_conf 99669929999989991689953048865899985999699999789939999889980887407998784799991799
Q 001472 159 SGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAITFHPDG 238 (1072)
Q Consensus 159 TGS~DGsI~IWDl~tgk~i~~l~~h~g~ItsLafSPdg~lLaTgS~DGtIrIWDl~tgk~i~~l~~h~~~VtsIafSPDG 238 (1072)
+++.||.|++||+.+++.+..+..|...|.+++|+|++.+|++++.|+.|++||+..+.....+..|...|.+++|+|++
T Consensus 181 sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~ 260 (321)
T 3ow8_A 181 SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 260 (321)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred EECCCCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCEEEEEECCCC
T ss_conf 99289839999999990999980258960189994899989999099809998789963258986888826899997999
Q ss_pred CEEEEEE-CCCEEEEEECCCEEECCCCCCC-CEEEEEEECCCCEEEEEECCCEEEEEECC
Q ss_conf 9999997-9949999935872210112688-70456994599999999869939999847
Q 001472 239 RTLFSGF-DDNLKVYSWEPVICHDSVDMGW-STLGDLCINDGKLLGCSFYRNSVGIWVAD 296 (1072)
Q Consensus 239 k~LasGs-dg~I~Iwdl~s~~~~~~i~~~~-s~is~l~spDGklLasgs~DGsIrIWDid 296 (1072)
.+|++++ ++.+++|++....+...+..+. .+....+.+++.+|++++.||.|++||..
T Consensus 261 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 261 THFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CEEEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECC
T ss_conf 989998189809999499988888983787738999998999999997589808999577
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=1.00 E-value=1 Score=311.47 Aligned_cols=288 Identities=24% Similarity=0.389 Sum_probs=259.0
Q ss_pred CCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEE
Q ss_conf 72489985479986999991189939999978990999987999427995079989479999389999999986991999
Q 001472 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGKPTALMSLCGLSSPVDSVAFDSAEVLVLAGASTGVIKL 84 (1072)
Q Consensus 5 G~~Ik~L~gHsg~VtsIafSPdg~~lLaTGs~DGtI~IWDi~t~~~i~sl~~hs~~ItsLafSPdg~~LatGS~DGsI~I 84 (1072)
....+.|.+|.+.|.+++|+|++ ++|++|+.||.|++||+.++..+..+..|...|.+++|+|++.+|++++.|+.+++
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~-~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~i 123 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDS-RLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSI 123 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTS-SEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred CHHHEEECCCCCCEEEEEECCCC-CEEEEEECCCCEEEEECCCCCCCEEEECCCCCEEEEEECCCCCEEEEEECCCEEEE
T ss_conf 21100104877836899988999-99999818896899989998743376038861889999999999999808981999
Q ss_pred EECCCC----EEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEE
Q ss_conf 986999----0699980789882799993799899999689809999889990799981689874899996899999999
Q 001472 85 WDLEES----KMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPDGRWVVSG 160 (1072)
Q Consensus 85 WDl~tg----k~i~tl~~h~~~VtsIafSPdgk~LaSgs~DGsI~IWDlrsgk~i~~l~~h~~~VtsIafSPDG~~LvTG 160 (1072)
|++.+. .....+.+|...+.++.|++++. +++++.|+.|++||+.++..+..+.+|...|.+++|+|++.++++|
T Consensus 124 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg 202 (340)
T 1got_B 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202 (340)
T ss_dssp EETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EECCCCCCCCEEEEEECCCCCCEEEEEECCCCC-EEEEECCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEE
T ss_conf 979668886136778448776389999879996-9999899929999899991889976999866899998999999999
Q ss_pred ECCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECC--CCCCEEEEEEECCC
Q ss_conf 6699299999899916899530488658999859996999997899399998899808874079--98784799991799
Q 001472 161 GFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRP--EVTGVHAITFHPDG 238 (1072)
Q Consensus 161 S~DGsI~IWDl~tgk~i~~l~~h~g~ItsLafSPdg~lLaTgS~DGtIrIWDl~tgk~i~~l~~--h~~~VtsIafSPDG 238 (1072)
+.|+.|++||++++.....+..|...|.+++|+|++.+|++++.||.|++||+..++.+..+.. +...+.+++|+|+|
T Consensus 203 ~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g 282 (340)
T 1got_B 203 ACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSG 282 (340)
T ss_dssp ETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTS
T ss_pred ECCCCEEEEECCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCEEEEEECCCC
T ss_conf 38993999778998167897487687799999499998999748981999988999189997268852416999998999
Q ss_pred CEEEEEECC-CEEEEEECCCEEECCCCCCCCE-EEEEEECCCCEEEEEECCCEEEEEE
Q ss_conf 999999799-4999993587221011268870-4569945999999998699399998
Q 001472 239 RTLFSGFDD-NLKVYSWEPVICHDSVDMGWST-LGDLCINDGKLLGCSFYRNSVGIWV 294 (1072)
Q Consensus 239 k~LasGsdg-~I~Iwdl~s~~~~~~i~~~~s~-is~l~spDGklLasgs~DGsIrIWD 294 (1072)
.+|++|+.+ .+++|+.........+..+... ....++++|.+|++++.||.|+||+
T Consensus 283 ~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 283 RLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEECC
T ss_conf 9999977999099988413838658505778488999829999899972886189559
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=1.00 E-value=1 Score=311.44 Aligned_cols=291 Identities=21% Similarity=0.393 Sum_probs=260.2
Q ss_pred CCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCC-----CCEEEEEECCCCCEEEEEECCCCCEEEEEECC
Q ss_conf 7248998547998699999118993999997899099998799-----94279950799894799993899999999869
Q 001472 5 GYKLQEFVAHSANVNCISIGKKACRFLITGGDDQKVNLWAIGK-----PTALMSLCGLSSPVDSVAFDSAEVLVLAGAST 79 (1072)
Q Consensus 5 G~~Ik~L~gHsg~VtsIafSPdg~~lLaTGs~DGtI~IWDi~t-----~~~i~sl~~hs~~ItsLafSPdg~~LatGS~D 79 (1072)
......|.+|.+.|.+++|+|++.++|++|+.|+.|++|++.. +..+..+.+|...|.+++|++++.+|++++.|
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D 86 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWD 86 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCEEEEEECC
T ss_conf 99997990554217899806999648998268862999537788752352326970780027899987999999999389
Q ss_pred CEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCC------
Q ss_conf 91999986999069998078988279999379989999968980999988999079998168987489999689------
Q 001472 80 GVIKLWDLEESKMVRTLTGHKSNCTAVEFHPFGEFFASGCMDTNLKIWDIRKKGCIHTYKGHTRGINTIRFTPD------ 153 (1072)
Q Consensus 80 GsI~IWDl~tgk~i~tl~~h~~~VtsIafSPdgk~LaSgs~DGsI~IWDlrsgk~i~~l~~h~~~VtsIafSPD------ 153 (1072)
+.|++||+.+++.+..+.+|...|.+++|+|++.+|++++.|+.|++||++ +.++..+.+|...+.++.|.|.
T Consensus 87 ~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 165 (319)
T 3frx_A 87 KTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDD 165 (319)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------
T ss_pred CEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECC-CCEEEEEECCCCCEEEEEECCCCCCCCC
T ss_conf 989999899897048973679968999996999999999489929999779-9808998426785897898268888888
Q ss_pred CCEEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEE
Q ss_conf 99999996699299999899916899530488658999859996999997899399998899808874079987847999
Q 001472 154 GRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEVTGVHAIT 233 (1072)
Q Consensus 154 G~~LvTGS~DGsI~IWDl~tgk~i~~l~~h~g~ItsLafSPdg~lLaTgS~DGtIrIWDl~tgk~i~~l~~h~~~VtsIa 233 (1072)
+.++++++.|+.|++||+...+....+.+|...|.+++|+|++.+|++++.||.|++||+.+++.+..+..+ ..+.+++
T Consensus 166 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~ 244 (319)
T 3frx_A 166 SVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLA 244 (319)
T ss_dssp CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEEEE
T ss_pred CCEEEEEECCCEEEEEECCCCHHHEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCC-CCEEEEE
T ss_conf 559999908997999889864201024477785799999699999999858996999999999578996389-9578999
Q ss_pred EECCCCEEEEEECCCEEEEEECCCEEECCCCC---------CCCEEEEEEECCCCEEEEEECCCEEEEEECCC
Q ss_conf 91799999999799499999358722101126---------88704569945999999998699399998479
Q 001472 234 FHPDGRTLFSGFDDNLKVYSWEPVICHDSVDM---------GWSTLGDLCINDGKLLGCSFYRNSVGIWVADV 297 (1072)
Q Consensus 234 fSPDGk~LasGsdg~I~Iwdl~s~~~~~~i~~---------~~s~is~l~spDGklLasgs~DGsIrIWDids 297 (1072)
|+|++.+++++.++++++|+++.......+.. ........|++||++|++++.||.|++|++..
T Consensus 245 ~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 245 FSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp ECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred ECCCCCEEEEECCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEEEE
T ss_conf 9489889999908971999717672563158630234667676345789989997999840475599999762
Done!